locus-tag	class	description
LKW29_00110	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
LKW29_00115	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
LKW29_00125	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
LKW29_00135	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
LKW29_00145	COG2766	serine protein kinase
LKW29_00165	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
LKW29_00175	COG1585	Membrane protein implicated in regulation of membrane protease activity
LKW29_00180	COG2268	Band 7 protein
LKW29_00190	COG3290	protein histidine kinase activity
LKW29_00195	COG4565	transcriptional regulatory protein
LKW29_00200	COG2851	Citrate transporter
LKW29_00220	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
LKW29_00225	COG3842	ATPase activity
LKW29_00230	COG1175	transmembrane transport
LKW29_00235	COG0395	ABC-type sugar transport system, permease component
LKW29_00245	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
LKW29_00250	COG0745	RESPONSE REGULATOR receiver
LKW29_00255	COG5002	protein histidine kinase activity
LKW29_00265	COG4990	cell redox homeostasis
LKW29_00275	COG3290	protein histidine kinase activity
LKW29_00280	COG4565	transcriptional regulatory protein
LKW29_00285	COG3493	citrate carrier protein
LKW29_00290	COG0281	malic enzyme
LKW29_00305	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LKW29_00315	COG5002	protein histidine kinase activity
LKW29_00320	COG0745	RESPONSE REGULATOR receiver
LKW29_00325	COG0456	acetyltransferase
LKW29_00325	COG0454	-acetyltransferase
LKW29_00330	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
LKW29_00335	COG3383	formate dehydrogenase (NAD+) activity
LKW29_00355	COG0531	amino acid
LKW29_00360	COG0640	Transcriptional regulator
LKW29_00365	COG2217	Heavy metal translocating P-type atpase
LKW29_00370	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
LKW29_00385	COG3227	Zinc metalloprotease (Elastase)
LKW29_00405	COG2720	vancomycin resistance protein
LKW29_00410	COG1316	TRANSCRIPTIONal
LKW29_00415	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LKW29_00420	COG0346	lactoylglutathione lyase activity
LKW29_00430	COG1027	Aspartate ammonia-lyase
LKW29_00435	COG1620	l-lactate permease
LKW29_00450	COG3104	oligopeptide transport
LKW29_00455	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LKW29_00460	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LKW29_00465	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LKW29_00475	COG2226	methyltransferase
LKW29_00480	COG0156	8-amino-7-oxononanoate synthase activity
LKW29_00485	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LKW29_00495	COG4548	von Willebrand factor, type A
LKW29_00500	COG0714	Associated with various cellular activities
LKW29_00505	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LKW29_00525	COG0531	amino acid
LKW29_00530	COG2188	Transcriptional regulator
LKW29_00535	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LKW29_00535	COG1263	PTS System
LKW29_00540	COG0366	Alpha amylase catalytic
LKW29_00555	COG0697	spore germination
LKW29_00565	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
LKW29_00570	COG1115	amino acid carrier protein
LKW29_00575	COG1126	abc transporter atp-binding protein
LKW29_00580	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LKW29_00585	COG0765	amino acid transport
LKW29_00590	COG0765	amino acid transport
LKW29_00595	COG0833	amino acid
LKW29_00620	COG2378	regulation of single-species biofilm formation
LKW29_00625	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
LKW29_00630	COG5002	protein histidine kinase activity
LKW29_00645	COG0659	secondary active sulfate transmembrane transporter activity
LKW29_00660	COG0747	negative chemotaxis
LKW29_00670	COG0601	transmembrane transport
LKW29_00675	COG4608	Belongs to the ABC transporter superfamily
LKW29_00685	COG2271	Major facilitator Superfamily
LKW29_00690	COG1846	Transcriptional regulator
LKW29_00700	COG1609	Transcriptional regulator
LKW29_00705	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LKW29_00725	COG1879	ABC-type sugar transport system periplasmic component
LKW29_00750	COG1063	alcohol dehydrogenase
LKW29_00765	COG3568	Endonuclease Exonuclease Phosphatase
LKW29_00790	COG1968	undecaprenyl-diphosphatase activity
LKW29_00795	COG0840	transmembrane signaling receptor activity
LKW29_00800	COG3584	3D domain protein
LKW29_00800	COG1388	LysM domain
LKW29_00805	COG1476	TRANSCRIPTIONal
LKW29_00820	COG3104	oligopeptide transport
LKW29_00825	COG1114	Component of the transport system for branched-chain amino acids
LKW29_00840	COG1113	amino acid transport
LKW29_00845	COG2252	PERMEase
LKW29_00870	COG0475	glutathione-regulated potassium exporter activity
LKW29_00870	COG0569	domain protein
LKW29_00885	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
LKW29_00890	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
LKW29_00895	COG4990	cell redox homeostasis
LKW29_00910	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LKW29_00915	COG0697	spore germination
LKW29_00920	COG0531	amino acid
LKW29_00930	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
LKW29_00935	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
LKW29_00940	COG1918	ferrous iron import across plasma membrane
LKW29_00940	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
LKW29_00945	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
LKW29_00950	COG0573	inorganic phosphate transmembrane transporter activity
LKW29_00955	COG0581	inorganic phosphate transmembrane transporter activity
LKW29_00965	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LKW29_01085	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
LKW29_01105	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
LKW29_01110	COG1116	anion transmembrane transporter activity
LKW29_01115	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LKW29_01120	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
LKW29_01125	COG0352	thiamine-phosphate diphosphorylase activity
LKW29_01130	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LKW29_01135	COG2104	thiamine diphosphate biosynthetic process
LKW29_01145	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
LKW29_01150	COG0351	phosphomethylpyrimidine kinase
LKW29_01190	COG2205	protein histidine kinase activity
LKW29_01195	COG2814	Major facilitator Superfamily
LKW29_01200	COG1846	Transcriptional regulator
LKW29_01215	COG2252	PERMEase
LKW29_01220	COG1028	Short-chain dehydrogenase reductase Sdr
LKW29_01225	COG1376	ErfK ybiS ycfS ynhG family protein
LKW29_01235	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LKW29_01240	COG1621	beta-fructofuranosidase activity
LKW29_01245	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LKW29_01245	COG1263	PTS System
LKW29_01250	COG1609	Transcriptional regulator
LKW29_01260	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LKW29_01300	COG0778	Nitroreductase
LKW29_01305	COG2719	SpoVR family
LKW29_01330	COG0446	pyridine nucleotide-disulphide oxidoreductase
LKW29_01335	COG1937	Protein conserved in bacteria
LKW29_01340	COG0425	Belongs to the sulfur carrier protein TusA family
LKW29_01340	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LKW29_01345	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LKW29_01345	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LKW29_01350	COG0425	Belongs to the sulfur carrier protein TusA family
LKW29_01365	COG2210	Belongs to the sulfur carrier protein TusA family
LKW29_01370	COG0730	response to heat
LKW29_01380	COG1316	TRANSCRIPTIONal
LKW29_01385	COG0604	alcohol dehydrogenase
LKW29_01390	COG1283	sodium-dependent phosphate transmembrane transporter activity
LKW29_01405	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LKW29_01405	COG3711	transcriptional antiterminator
LKW29_01410	COG1447	Phosphotransferase system cellobiose-specific component IIA
LKW29_01415	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
LKW29_01435	COG3584	3D domain protein
LKW29_01435	COG1388	LysM domain
LKW29_01440	COG0577	efflux transmembrane transporter activity
LKW29_01445	COG1136	(ABC) transporter
LKW29_01455	COG5522	Integral membrane protein (intg_mem_TP0381)
LKW29_01470	COG1114	Component of the transport system for branched-chain amino acids
LKW29_01475	COG3546	catalase activity
LKW29_01510	COG0586	Pfam SNARE associated Golgi protein
LKW29_01550	COG0531	amino acid
LKW29_01555	COG0475	glutathione-regulated potassium exporter activity
LKW29_01565	COG1737	Transcriptional regulator
LKW29_01575	COG1263	PTS System
LKW29_01575	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LKW29_01585	COG2259	Doxx family
LKW29_01600	COG0697	spore germination
LKW29_01605	COG1522	sequence-specific DNA binding
LKW29_01620	COG2076	Multidrug Resistance protein
LKW29_01625	COG1309	transcriptional regulator
LKW29_01630	COG2814	Major facilitator Superfamily
LKW29_01635	COG1733	regulation of RNA biosynthetic process
LKW29_01645	COG2249	NAD(P)H dehydrogenase (quinone) activity
LKW29_01655	COG2211	Major facilitator Superfamily
LKW29_01665	COG0693	protein deglycase activity
LKW29_01670	COG0693	protein deglycase activity
LKW29_01670	COG0753	catalase activity
LKW29_01680	COG0531	amino acid
LKW29_01685	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
LKW29_01695	COG1012	belongs to the aldehyde dehydrogenase family
LKW29_01700	COG1132	(ABC) transporter
LKW29_01710	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LKW29_01715	COG0765	amino acid transport
LKW29_01720	COG1126	abc transporter atp-binding protein
LKW29_01735	COG0189	ligase activity
LKW29_01765	COG0028	Belongs to the TPP enzyme family
LKW29_01770	COG3527	Alpha-acetolactate decarboxylase
LKW29_01785	COG0561	phosphatase activity
LKW29_01800	COG0635	Involved in the biosynthesis of porphyrin-containing compound
LKW29_01815	COG0659	secondary active sulfate transmembrane transporter activity
LKW29_01835	COG0653	protein targeting
LKW29_01840	COG2244	polysaccharide biosynthetic process
LKW29_01850	COG0860	N-Acetylmuramoyl-L-alanine amidase
LKW29_01855	COG4196	transglutaminase domain protein
LKW29_01870	COG1696	Membrane protein involved in D-alanine export
LKW29_01885	COG1024	Enoyl-CoA hydratase
LKW29_01900	COG1363	Peptidase, m42
LKW29_01920	COG3938	Belongs to the proline racemase family
LKW29_01960	COG0601	transmembrane transport
LKW29_01965	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LKW29_01975	COG4608	Belongs to the ABC transporter superfamily
LKW29_02010	COG0477	Major facilitator Superfamily
LKW29_02015	COG3290	protein histidine kinase activity
LKW29_02020	COG4565	transcriptional regulatory protein
LKW29_02025	COG3181	Tripartite tricarboxylate transporter family receptor
LKW29_02055	COG0789	Transcriptional regulator
LKW29_02055	COG4978	Transcriptional regulator
LKW29_02070	COG0305	Participates in initiation and elongation during chromosome replication
LKW29_02110	COG0477	Major facilitator Superfamily
LKW29_02160	COG1309	transcriptional regulator
LKW29_02180	COG1183	phosphatidylcholine synthase activity
LKW29_02200	COG2376	Dihydroxyacetone kinase
LKW29_02210	COG2376	Dihydroxyacetone kinase
LKW29_02215	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
LKW29_02220	COG1959	2 iron, 2 sulfur cluster binding
LKW29_02250	COG2770	Histidine kinase
LKW29_02250	COG3437	response regulator, receiver
LKW29_02300	COG3237	CsbD-like
LKW29_02325	COG1191	sigma factor activity
LKW29_02335	COG2208	phosphoserine phosphatase activity
LKW29_02340	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
LKW29_02345	COG0784	Response regulator, receiver
LKW29_02345	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LKW29_02345	COG2198	Histidine kinase
LKW29_02345	COG2205	protein histidine kinase activity
LKW29_02400	COG0420	3'-5' exonuclease activity
LKW29_02425	COG1309	transcriptional regulator
LKW29_02430	COG2814	Major facilitator Superfamily
LKW29_02435	COG0346	lactoylglutathione lyase activity
LKW29_02440	COG0346	lactoylglutathione lyase activity
LKW29_02445	COG0457	Tetratricopeptide repeat
LKW29_02450	COG2267	carboxylic ester hydrolase activity
LKW29_02470	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
LKW29_02475	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
LKW29_02485	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
LKW29_02525	COG0477	Major facilitator Superfamily
LKW29_02530	COG0477	Major facilitator Superfamily
LKW29_02540	COG3973	AAA domain
LKW29_02545	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LKW29_02565	COG4980	gas vesicle protein
LKW29_02570	COG0537	adenosine 5'-monophosphoramidase activity
LKW29_02575	COG1131	(ABC) transporter
LKW29_02580	COG4473	ABC transporter
LKW29_02595	COG1309	transcriptional regulator
LKW29_02605	COG3402	PFAM membrane-flanked domain
LKW29_02650	COG3402	PFAM membrane-flanked domain
LKW29_02655	COG3428	Bacterial PH domain
LKW29_02660	COG2329	Antibiotic biosynthesis monooxygenase
LKW29_02665	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LKW29_02670	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
LKW29_02675	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
LKW29_02680	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
LKW29_02715	COG1309	transcriptional regulator
LKW29_02720	COG1511	domain protein
LKW29_02745	COG1609	Transcriptional regulator
LKW29_02755	COG1234	tRNA 3'-trailer cleavage
LKW29_02760	COG0095	Lipoate-protein ligase
LKW29_02770	COG0318	PFAM AMP-dependent synthetase and ligase
LKW29_02800	COG3209	COG3209 Rhs family protein
LKW29_02840	COG1078	dGTPase activity
LKW29_02850	COG1595	DNA-templated transcription, initiation
LKW29_02855	COG3708	Transcriptional regulator
LKW29_02855	COG2207	Transcriptional regulator
LKW29_02870	COG2205	protein histidine kinase activity
LKW29_02875	COG0745	RESPONSE REGULATOR receiver
LKW29_02900	COG0501	Belongs to the peptidase M48B family
LKW29_02905	COG0840	transmembrane signaling receptor activity
LKW29_02910	COG0697	spore germination
LKW29_02930	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
LKW29_02935	COG2224	Isocitrate lyase
LKW29_02960	COG4903	ComK protein
LKW29_02965	COG0398	Pfam SNARE associated Golgi protein
LKW29_02975	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
LKW29_02980	COG1074	ATP-dependent DNA helicase activity
LKW29_03025	COG0179	Fumarylacetoacetate (FAA) hydrolase
LKW29_03050	COG0367	asparagine synthase
LKW29_03055	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
LKW29_03060	COG0753	catalase activity
LKW29_03065	COG0004	ammonium transporteR
LKW29_03085	COG2996	Protein conserved in bacteria
LKW29_03095	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LKW29_03105	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LKW29_03120	COG0561	phosphatase activity
LKW29_03130	COG0542	response to heat
LKW29_03140	COG2267	carboxylic ester hydrolase activity
LKW29_03155	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LKW29_03160	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
LKW29_03165	COG5504	Zn-dependent protease
LKW29_03175	COG0180	Tryptophanyl-tRNA synthetase
LKW29_03185	COG4166	transmembrane transport
LKW29_03190	COG0601	transmembrane transport
LKW29_03195	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LKW29_03200	COG0444	Belongs to the ABC transporter superfamily
LKW29_03205	COG4608	Belongs to the ABC transporter superfamily
LKW29_03210	COG0534	Mate efflux family protein
LKW29_03215	COG4166	transmembrane transport
LKW29_03230	COG0861	Integral membrane protein TerC family
LKW29_03235	COG4862	establishment of competence for transformation
LKW29_03240	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LKW29_03250	COG1164	Oligoendopeptidase f
LKW29_03260	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
LKW29_03265	COG2346	COG2346, Truncated hemoglobins
LKW29_03270	COG4116	CYTH
LKW29_03280	COG2357	RelA SpoT domain protein
LKW29_03290	COG0564	pseudouridine synthase activity
LKW29_03310	COG1216	Glycosyl transferase, family 2
LKW29_03310	COG0463	Glycosyl transferase, family 2
LKW29_03350	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
LKW29_03365	COG1091	dTDP-4-dehydrorhamnose reductase activity
LKW29_03410	COG2153	protein acetylation
LKW29_03420	COG2382	esterase
LKW29_03435	COG5492	domain, Protein
LKW29_03440	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LKW29_03450	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
LKW29_03450	COG0512	Glutamine amidotransferase of anthranilate synthase
LKW29_03485	COG1620	l-lactate permease
LKW29_03490	COG5634	Uncharacterized conserved protein (DUF2278)
LKW29_03545	COG0508	dehydrogenase complex catalyzes the overall conversion of
LKW29_03555	COG1476	TRANSCRIPTIONal
LKW29_03615	COG2226	methyltransferase
LKW29_03625	COG1686	Belongs to the peptidase S11 family
LKW29_03630	COG0681	Belongs to the peptidase S26 family
LKW29_03665	COG1012	belongs to the aldehyde dehydrogenase family
LKW29_03670	COG3842	ATPase activity
LKW29_03675	COG1176	ABC-type spermidine putrescine transport system, permease component I
LKW29_03680	COG1177	transmembrane transport
LKW29_03685	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
LKW29_03695	COG2409	Drug exporters of the RND superfamily
LKW29_03705	COG0564	pseudouridine synthase activity
LKW29_03715	COG2340	Cysteine-rich secretory protein family
LKW29_03720	COG0247	lactate metabolic process
LKW29_03725	COG0277	FAD linked oxidase domain protein
LKW29_03730	COG3835	regulator
LKW29_03740	COG0745	RESPONSE REGULATOR receiver
LKW29_03745	COG5002	protein histidine kinase activity
LKW29_03750	COG2186	Transcriptional regulator
LKW29_03770	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
LKW29_03780	COG2116	formate transmembrane transporter activity
LKW29_03785	COG0861	Integral membrane protein TerC family
LKW29_03800	COG2030	dehydratase
LKW29_03820	COG1028	Short-chain dehydrogenase reductase Sdr
LKW29_03825	COG3243	poly(R)-hydroxyalkanoic acid synthase
LKW29_03830	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LKW29_03835	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
LKW29_03850	COG1840	ABC-type Fe3 transport system, periplasmic component
LKW29_03880	COG1349	DNA-binding transcription factor activity
LKW29_03900	COG2861	carbohydrate metabolic process
LKW29_03910	COG3852	Histidine kinase
LKW29_03915	COG1846	Transcriptional regulator
LKW29_03925	COG2318	DinB family
LKW29_03935	COG5002	protein histidine kinase activity
LKW29_03945	COG0720	synthase
LKW29_03960	COG4873	Protein conserved in bacteria
LKW29_03990	COG1780	Probably involved in ribonucleotide reductase function
LKW29_04010	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LKW29_04015	COG1725	Transcriptional regulator
LKW29_04020	COG1131	(ABC) transporter
LKW29_04030	COG1131	(ABC) transporter
LKW29_04035	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
LKW29_04050	COG1522	sequence-specific DNA binding
LKW29_04060	COG1335	isochorismatase
LKW29_04070	COG1619	proteins homologs of microcin C7 resistance protein MccF
LKW29_04075	COG2070	2-Nitropropane dioxygenase
LKW29_04080	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
LKW29_04090	COG1696	Membrane protein involved in D-alanine export
LKW29_04115	COG0716	FMN binding
LKW29_04130	COG3173	Aminoglycoside phosphotransferase
LKW29_04150	COG0534	Mate efflux family protein
LKW29_04155	COG1968	undecaprenyl-diphosphatase activity
LKW29_04170	COG1846	Transcriptional regulator
LKW29_04180	COG1301	dicarboxylic acid transport
LKW29_04190	COG4709	membrane
LKW29_04195	COG3874	Sporulation protein YtfJ
LKW29_04215	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
LKW29_04220	COG0028	Belongs to the TPP enzyme family
LKW29_04225	COG0440	acetolactate synthase activity
LKW29_04230	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
LKW29_04240	COG0473	3-isopropylmalate dehydrogenase activity
LKW29_04265	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
LKW29_04300	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
LKW29_04315	COG1183	phosphatidylcholine synthase activity
LKW29_04320	COG1368	sulfuric ester hydrolase activity
LKW29_04330	COG0019	diaminopimelate decarboxylase activity
LKW29_04350	COG0529	Catalyzes the synthesis of activated sulfate
LKW29_04355	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LKW29_04380	COG0733	neurotransmitter:sodium symporter activity
LKW29_04400	COG1757	Na H antiporter
LKW29_04415	COG4758	membrane
LKW29_04420	COG4585	Histidine kinase
LKW29_04425	COG2197	response regulator
LKW29_04435	COG1114	Component of the transport system for branched-chain amino acids
LKW29_04445	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
LKW29_04470	COG1017	nitric oxide dioxygenase activity
LKW29_04470	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LKW29_04485	COG0730	response to heat
LKW29_04490	COG0306	phosphate transporter
LKW29_04495	COG1392	Phosphate transport regulator
LKW29_04520	COG1801	Protein of unknown function DUF72
LKW29_04530	COG0582	viral genome integration into host DNA
LKW29_04535	COG5002	protein histidine kinase activity
LKW29_04570	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
LKW29_04575	COG1686	Belongs to the peptidase S11 family
LKW29_04580	COG2715	membrane protein required for spore maturation
LKW29_04585	COG0700	Nucleoside recognition
LKW29_04590	COG1187	pseudouridine synthase activity
LKW29_04600	COG1333	cytochrome c biogenesis protein
LKW29_04605	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
LKW29_04610	COG0745	RESPONSE REGULATOR receiver
LKW29_04615	COG5002	protein histidine kinase activity
LKW29_04620	COG2096	Adenosyltransferase
LKW29_04635	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
LKW29_04640	COG1141	Ferredoxin
LKW29_04645	COG4955	Helix-turn-helix domain
LKW29_04650	COG0514	ATP-dependent DNA helicase (RecQ)
LKW29_04655	COG1266	CAAX protease self-immunity
LKW29_04675	COG4862	establishment of competence for transformation
LKW29_04680	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
LKW29_04700	COG0492	ferredoxin-NADP+ reductase activity
LKW29_04705	COG0252	asparaginase activity
LKW29_04775	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
LKW29_04790	COG0142	geranyltranstransferase activity
LKW29_04800	COG0142	geranyltranstransferase activity
LKW29_04820	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
LKW29_04825	COG0457	Tetratricopeptide repeat
LKW29_04845	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
LKW29_04855	COG4347	Protein of unknown function (DUF1405)
LKW29_04870	COG2738	Putative neutral zinc metallopeptidase
LKW29_04880	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LKW29_04885	COG1694	Mazg nucleotide pyrophosphohydrolase
LKW29_04900	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
LKW29_04905	COG0438	transferase activity, transferring glycosyl groups
LKW29_04960	COG3935	DnaD domain protein
LKW29_04965	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
LKW29_04975	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LKW29_04975	COG4499	WXG100 protein secretion system (Wss), protein YukC
LKW29_05035	COG0116	Belongs to the methyltransferase superfamily
LKW29_05045	COG1199	ATP-dependent helicase activity
LKW29_05050	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
LKW29_05060	COG3173	Aminoglycoside phosphotransferase
LKW29_05065	COG0024	Methionine aminopeptidase
LKW29_05075	COG2233	PERMEase
LKW29_05080	COG2311	Membrane
LKW29_05085	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
LKW29_05095	COG0456	acetyltransferase
LKW29_05145	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LKW29_05170	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
LKW29_05185	COG1215	transferase activity, transferring glycosyl groups
LKW29_05205	COG0454	-acetyltransferase
LKW29_05225	COG0328	RNA-DNA hybrid ribonuclease activity
LKW29_05265	COG1280	lysine exporter protein (LysE YggA)
LKW29_05280	COG3162	membrane
LKW29_05285	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LKW29_05290	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
LKW29_05300	COG0475	glutathione-regulated potassium exporter activity
LKW29_05305	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LKW29_05310	COG0789	Transcriptional regulator
LKW29_05310	COG4978	Transcriptional regulator
LKW29_05325	COG1434	Gram-negative-bacterium-type cell wall biogenesis
LKW29_05380	COG1923	regulation of RNA biosynthetic process
LKW29_05390	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
LKW29_05400	COG2201	protein-glutamate methylesterase activity
LKW29_05410	COG1776	CheC inhibitor of MCP methylation
LKW29_05410	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
LKW29_05425	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
LKW29_05445	COG1256	bacterial-type flagellum assembly
LKW29_05470	COG1815	bacterial-type flagellum-dependent cell motility
LKW29_05475	COG1558	bacterial-type flagellum-dependent cell motility
LKW29_05490	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
LKW29_05500	COG1157	protein secretion by the type III secretion system
LKW29_05535	COG0784	Response regulator, receiver
LKW29_05535	COG0835	chemotaxis
LKW29_05545	COG0463	Glycosyl transferase, family 2
LKW29_05570	COG0463	Glycosyl transferase, family 2
LKW29_05570	COG0457	Tetratricopeptide repeat
LKW29_05585	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
LKW29_05590	COG0741	lytic transglycosylase activity
LKW29_05605	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
LKW29_05605	COG1776	CheC inhibitor of MCP methylation
LKW29_05615	COG1338	Plays a role in the flagellum-specific transport system
LKW29_05620	COG1987	bacterial-type flagellum assembly
LKW29_05630	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
LKW29_05635	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
LKW29_05640	COG1419	protein localization to endoplasmic reticulum
LKW29_05645	COG4786	Flagellar basal body rod
LKW29_05650	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
LKW29_05675	COG1309	transcriptional regulator
LKW29_05695	COG2329	Antibiotic biosynthesis monooxygenase
LKW29_05725	COG3842	ATPase activity
LKW29_05730	COG0725	ABC transporter, periplasmic molybdate-binding protein
LKW29_05740	COG1234	tRNA 3'-trailer cleavage
LKW29_05765	COG1686	Belongs to the peptidase S11 family
LKW29_05775	COG0406	alpha-ribazole phosphatase activity
LKW29_05805	COG0367	asparagine synthase
LKW29_05835	COG1802	Transcriptional regulator
LKW29_05840	COG0697	spore germination
LKW29_05845	COG0523	cobalamin synthesis protein
LKW29_05850	COG0701	Predicted permease
LKW29_05860	COG0438	transferase activity, transferring glycosyl groups
LKW29_05860	COG1216	Glycosyl transferase, family 2
LKW29_05865	COG1757	Na H antiporter
LKW29_05870	COG0114	fumarate hydratase activity
LKW29_05895	COG3340	Belongs to the peptidase S51 family
LKW29_05915	COG0785	Cytochrome C biogenesis protein
LKW29_05945	COG2733	membrane
LKW29_05980	COG1131	(ABC) transporter
LKW29_05995	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LKW29_06000	COG0528	UMP kinase activity
LKW29_06010	COG1027	Aspartate ammonia-lyase
LKW29_06015	COG0281	malic enzyme
LKW29_06020	COG4191	Histidine kinase
LKW29_06025	COG0784	Response regulator, receiver
LKW29_06030	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
LKW29_06090	COG0860	N-Acetylmuramoyl-L-alanine amidase
LKW29_06100	COG2814	Major facilitator Superfamily
LKW29_06115	COG1966	Carbon starvation protein
LKW29_06125	COG0477	Major facilitator Superfamily
LKW29_06130	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LKW29_06140	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LKW29_06155	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
LKW29_06170	COG2244	polysaccharide biosynthetic process
LKW29_06175	COG0733	neurotransmitter:sodium symporter activity
LKW29_06185	COG5566	PFAM Mor transcription activator
LKW29_06190	COG2323	membrane
LKW29_06210	COG2084	Dehydrogenase
LKW29_06225	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LKW29_06235	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
LKW29_06240	COG0028	Belongs to the TPP enzyme family
LKW29_06245	COG0440	acetolactate synthase activity
LKW29_06250	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
LKW29_06260	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
LKW29_06290	COG3384	dioxygenase
LKW29_06300	COG3279	Response regulator of the LytR AlgR family
LKW29_06305	COG0427	acetyl-CoA hydrolase
LKW29_06325	COG1073	alpha beta
LKW29_06330	COG4166	transmembrane transport
LKW29_06355	COG0535	radical SAM domain protein
LKW29_06360	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LKW29_06380	COG1914	H( )-stimulated, divalent metal cation uptake system
LKW29_06395	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
LKW29_06425	COG2390	Transcriptional regulator
LKW29_06435	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LKW29_06440	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
LKW29_06455	COG4224	UPF0291 protein
LKW29_06475	COG0006	proline dipeptidase activity
LKW29_06480	COG2132	Multicopper oxidase
LKW29_06495	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LKW29_06510	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
LKW29_06525	COG2372	response to copper ion
LKW29_06525	COG1276	copper resistance
LKW29_06530	COG4549	nuclear export factor GLE1
LKW29_06540	COG0697	spore germination
LKW29_06545	COG0583	DNA-binding transcription factor activity
LKW29_06550	COG1959	2 iron, 2 sulfur cluster binding
LKW29_06555	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
LKW29_06560	COG0778	Nitroreductase
LKW29_06570	COG0628	permease
LKW29_06580	COG1231	oxidoreductase activity
LKW29_06585	COG0523	cobalamin synthesis protein
LKW29_06605	COG2030	dehydratase
LKW29_06610	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LKW29_06620	COG0411	ABC transporter
LKW29_06640	COG0583	DNA-binding transcription factor activity
LKW29_06650	COG1942	4-Oxalocrotonate Tautomerase
LKW29_06670	COG1271	oxidase subunit
LKW29_06675	COG1294	oxidase, subunit
LKW29_06680	COG4988	ABC transporter
LKW29_06685	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
LKW29_06705	COG1686	Belongs to the peptidase S11 family
LKW29_06720	COG1388	LysM domain
LKW29_06720	COG0791	NLP P60 protein
LKW29_06735	COG0745	RESPONSE REGULATOR receiver
LKW29_06750	COG0300	oxidoreductase activity
LKW29_06785	COG0460	homoserine dehydrogenase
LKW29_06810	COG1316	TRANSCRIPTIONal
LKW29_06820	COG0745	RESPONSE REGULATOR receiver
LKW29_06825	COG5002	protein histidine kinase activity
LKW29_06840	COG1285	pathogenesis
LKW29_06845	COG1247	-acetyltransferase
LKW29_06865	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LKW29_06875	COG1082	Xylose isomerase domain protein TIM barrel
LKW29_06885	COG2814	Major facilitator Superfamily
LKW29_06890	COG1279	arginine transmembrane transporter activity
LKW29_06900	COG1752	Esterase of the alpha-beta hydrolase superfamily
LKW29_06935	COG0577	efflux transmembrane transporter activity
LKW29_06940	COG2002	toxin-antitoxin pair type II binding
LKW29_06945	COG1404	Belongs to the peptidase S8 family
LKW29_06950	COG0640	Transcriptional regulator
LKW29_06955	COG0667	Aldo Keto reductase
LKW29_06985	COG0840	transmembrane signaling receptor activity
LKW29_07000	COG3949	Membrane
LKW29_07005	COG0783	Belongs to the Dps family
LKW29_07020	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LKW29_07030	COG1231	oxidoreductase activity
LKW29_07040	COG4989	oxidoreductase activity
LKW29_07045	COG0523	cobalamin synthesis protein
LKW29_07050	COG0456	acetyltransferase
LKW29_07110	COG3443	Belongs to the bacterial solute-binding protein 9 family
LKW29_07110	COG0803	Belongs to the bacterial solute-binding protein 9 family
LKW29_07120	COG0702	epimerase
LKW29_07130	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
LKW29_07140	COG4166	transmembrane transport
LKW29_07155	COG0406	alpha-ribazole phosphatase activity
LKW29_07165	COG5337	Spore coat protein CotH
LKW29_07170	COG1051	belongs to the nudix hydrolase family
LKW29_07175	COG0586	Pfam SNARE associated Golgi protein
LKW29_07180	COG2244	polysaccharide biosynthetic process
LKW29_07190	COG0701	Predicted permease
LKW29_07195	COG3689	TIGRFAM TIGR03943 family protein
LKW29_07200	COG1607	acyl-coa hydrolase
LKW29_07210	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LKW29_07225	COG0702	epimerase
LKW29_07230	COG2839	Protein conserved in bacteria
LKW29_07235	COG1253	flavin adenine dinucleotide binding
LKW29_07250	COG1114	Component of the transport system for branched-chain amino acids
LKW29_07255	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LKW29_07275	COG0860	N-Acetylmuramoyl-L-alanine amidase
LKW29_07285	COG1876	peptidase activity
LKW29_07295	COG0154	amidase activity
LKW29_07300	COG2211	Major facilitator Superfamily
LKW29_07320	COG0561	phosphatase activity
LKW29_07330	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LKW29_07335	COG4106	trans-aconitate 2-methyltransferase activity
LKW29_07350	COG1819	glycosyl
LKW29_07355	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LKW29_07360	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LKW29_07395	COG0456	acetyltransferase
LKW29_07450	COG3874	Sporulation protein YtfJ
LKW29_07475	COG2226	methyltransferase
LKW29_07500	COG0346	lactoylglutathione lyase activity
LKW29_07510	COG0604	alcohol dehydrogenase
LKW29_07515	COG1595	DNA-templated transcription, initiation
LKW29_07540	COG0386	Belongs to the glutathione peroxidase family
LKW29_07545	COG1305	Transglutaminase-like
LKW29_07550	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
LKW29_07555	COG0714	Associated with various cellular activities
LKW29_07570	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
LKW29_07575	COG1140	nitrate reductase beta subunit
LKW29_07580	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
LKW29_07585	COG2181	nitrate reductase activity
LKW29_07605	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
LKW29_07610	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
LKW29_07615	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
LKW29_07620	COG0303	'Molybdopterin
LKW29_07625	COG0314	molybdopterin synthase activity
LKW29_07635	COG2223	nitrite transmembrane transporter activity
LKW29_07650	COG1648	precorrin-2 dehydrogenase activity
LKW29_07660	COG1587	Uroporphyrinogen-III synthase
LKW29_07660	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
LKW29_07665	COG2146	nitrite reductase [NAD(P)H] activity
LKW29_07670	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LKW29_07675	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
LKW29_07710	COG2359	stage V sporulation protein S
LKW29_07735	COG1418	mRNA catabolic process
LKW29_07740	COG0488	(ABC) transporter
LKW29_07755	COG0629	single-stranded DNA binding
LKW29_07770	COG1413	lyase activity
LKW29_07785	COG2136	Putative SAM-dependent methyltransferase
LKW29_07785	COG2521	methyltransferase
LKW29_07790	COG0018	arginyl-trna synthetase
LKW29_07815	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
LKW29_07835	COG0017	Asparaginyl-tRNA synthetase
LKW29_07855	COG1674	ftsk spoiiie
LKW29_07925	COG1929	Belongs to the glycerate kinase type-1 family
LKW29_07930	COG0471	metal ion transport
LKW29_07935	COG0745	RESPONSE REGULATOR receiver
LKW29_07940	COG3850	Histidine kinase
LKW29_07940	COG5002	protein histidine kinase activity
LKW29_07955	COG0733	neurotransmitter:sodium symporter activity
LKW29_07980	COG2610	gluconate transmembrane transporter activity
LKW29_07985	COG1454	alcohol dehydrogenase
LKW29_07990	COG1794	racemase activity, acting on amino acids and derivatives
LKW29_08000	COG0456	acetyltransferase
LKW29_08015	COG1131	(ABC) transporter
LKW29_08030	COG0546	phosphoglycolate phosphatase activity
LKW29_08050	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
LKW29_08065	COG0768	penicillin binding
LKW29_08070	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
LKW29_08075	COG0204	Acyl-transferase
LKW29_08080	COG1272	protein, Hemolysin III
LKW29_08090	COG0805	protein transport
LKW29_08100	COG1307	EDD domain protein, DegV family
LKW29_08105	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
LKW29_08110	COG1999	signal sequence binding
LKW29_08115	COG0071	Belongs to the small heat shock protein (HSP20) family
LKW29_08120	COG0367	asparagine synthase
LKW29_08135	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LKW29_08140	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
LKW29_08175	COG0668	transmembrane transport
LKW29_08180	COG2203	Gaf domain
LKW29_08180	COG4585	Histidine kinase
LKW29_08185	COG2197	response regulator
LKW29_08195	COG1064	alcohol dehydrogenase
LKW29_08250	COG0517	IMP dehydrogenase activity
LKW29_08250	COG1125	glycine betaine transport
LKW29_08255	COG1174	glycine betaine transport
LKW29_08290	COG1253	flavin adenine dinucleotide binding
LKW29_08295	COG1012	belongs to the aldehyde dehydrogenase family
LKW29_08300	COG5506	Protein of unknown function (DUF1694)
LKW29_08315	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
LKW29_08325	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
LKW29_08330	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LKW29_08335	COG0456	acetyltransferase
LKW29_08340	COG3829	transcription factor binding
LKW29_08345	COG1509	lysine 2,3-aminomutase activity
LKW29_08385	COG4326	sporulation control protein
LKW29_08390	COG0671	phosphoesterase, PA-phosphatase related
LKW29_08395	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
LKW29_08400	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LKW29_08430	COG1787	Restriction endonuclease
LKW29_08430	COG1715	Restriction endonuclease
LKW29_08520	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LKW29_08560	COG4499	WXG100 protein secretion system (Wss), protein YukC
LKW29_08560	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LKW29_08570	COG2814	Major facilitator Superfamily
LKW29_08575	COG4841	protein insertion into membrane
LKW29_08580	COG0372	Belongs to the citrate synthase family
LKW29_08585	COG2079	MmgE PrpD family protein
LKW29_08590	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
LKW29_08595	COG1960	acyl-CoA dehydrogenase activity
LKW29_08600	COG2084	Dehydrogenase
LKW29_08610	COG1280	lysine exporter protein (LysE YggA)
LKW29_08615	COG1024	Enoyl-CoA hydratase
LKW29_08630	COG0420	3'-5' exonuclease activity
LKW29_08635	COG0419	ATPase involved in DNA repair
LKW29_08655	COG2223	nitrite transmembrane transporter activity
LKW29_08660	COG1028	Short-chain dehydrogenase reductase Sdr
LKW29_08665	COG1169	isochorismate synthase
LKW29_08670	COG1021	2,3-dihydroxybenzoate-AMP ligase
LKW29_08675	COG1535	isochorismatase
LKW29_08675	COG3433	isochorismatase activity
LKW29_08685	COG3251	PFAM MbtH domain protein
LKW29_08690	COG2814	Major facilitator Superfamily
LKW29_08705	COG0776	regulation of translation
LKW29_08715	COG2318	DinB family
LKW29_08740	COG2329	Antibiotic biosynthesis monooxygenase
LKW29_08745	COG1187	pseudouridine synthase activity
LKW29_08750	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
LKW29_08765	COG0596	Alpha beta hydrolase
LKW29_08790	COG2226	methyltransferase
LKW29_08835	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LKW29_08870	COG1247	-acetyltransferase
LKW29_08900	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
LKW29_08910	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LKW29_08920	COG1278	Cold shock
LKW29_08935	COG0010	Belongs to the arginase family
LKW29_08940	COG0561	phosphatase activity
LKW29_08985	COG0583	DNA-binding transcription factor activity
LKW29_08990	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
LKW29_09005	COG0583	DNA-binding transcription factor activity
LKW29_09010	COG2258	MOSC domain
LKW29_09025	COG1132	(ABC) transporter
LKW29_09030	COG1132	(ABC) transporter
LKW29_09050	COG1396	sequence-specific DNA binding
LKW29_09080	COG3075	Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor
LKW29_09085	COG1595	DNA-templated transcription, initiation
LKW29_09110	COG1649	PFAM Uncharacterised BCR, COG1649
LKW29_09135	COG2971	BadF BadG BcrA BcrD
LKW29_09140	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
LKW29_09145	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
LKW29_09165	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LKW29_09195	COG1309	transcriptional regulator
LKW29_09210	COG0577	efflux transmembrane transporter activity
LKW29_09210	COG1136	(ABC) transporter
LKW29_09215	COG0500	methyltransferase
LKW29_09215	COG3615	Tellurite resistance protein tehB
LKW29_09225	COG2226	methyltransferase
LKW29_09230	COG3961	Belongs to the TPP enzyme family
LKW29_09235	COG1846	Transcriptional regulator
LKW29_09270	COG2195	Cleaves the N-terminal amino acid of tripeptides
LKW29_09285	COG1595	DNA-templated transcription, initiation
LKW29_09295	COG0768	penicillin binding
LKW29_09300	COG0768	penicillin binding
LKW29_09305	COG2367	Beta-lactamase
LKW29_09310	COG0671	phosphoesterase, PA-phosphatase related
LKW29_09315	COG1609	Transcriptional regulator
LKW29_09325	COG0673	inositol 2-dehydrogenase activity
LKW29_09335	COG1012	belongs to the aldehyde dehydrogenase family
LKW29_09350	COG0191	fructose-bisphosphate aldolase activity
LKW29_09370	COG0737	Belongs to the 5'-nucleotidase family
LKW29_09380	COG0457	Tetratricopeptide repeat
LKW29_09385	COG1476	TRANSCRIPTIONal
LKW29_09400	COG1876	peptidase activity
LKW29_09420	COG1309	transcriptional regulator
LKW29_09425	COG0488	(ABC) transporter
LKW29_09440	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LKW29_09475	COG1131	(ABC) transporter
LKW29_09485	COG1309	transcriptional regulator
LKW29_09500	COG1960	acyl-CoA dehydrogenase activity
LKW29_09505	COG0439	Biotin carboxylase
LKW29_09510	COG0511	ligase activity, forming carbon-carbon bonds
LKW29_09515	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
LKW29_09520	COG1024	Enoyl-CoA hydratase
LKW29_09525	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
LKW29_09530	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
LKW29_09540	COG1247	-acetyltransferase
LKW29_09545	COG0572	uridine kinase
LKW29_09555	COG2318	DinB family
LKW29_09560	COG1686	Belongs to the peptidase S11 family
LKW29_09585	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
LKW29_09625	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
LKW29_09625	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
LKW29_09650	COG2814	Major facilitator Superfamily
LKW29_09670	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
LKW29_09690	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LKW29_09705	COG1063	alcohol dehydrogenase
LKW29_09720	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
LKW29_09725	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
LKW29_09740	COG3773	Cell wall hydrolase
LKW29_09750	COG0745	RESPONSE REGULATOR receiver
LKW29_09765	COG0488	(ABC) transporter
LKW29_09780	COG1136	(ABC) transporter
LKW29_09805	COG0460	homoserine dehydrogenase
LKW29_09810	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LKW29_09820	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
LKW29_09885	COG2124	cytochrome p450
LKW29_09920	COG0561	phosphatase activity
LKW29_09930	COG0768	penicillin binding
LKW29_09935	COG1819	glycosyl
LKW29_09940	COG1794	racemase activity, acting on amino acids and derivatives
LKW29_09950	COG1122	ATPase activity
LKW29_09965	COG2205	protein histidine kinase activity
LKW29_09975	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
LKW29_09980	COG0604	alcohol dehydrogenase
LKW29_09985	COG0768	penicillin binding
LKW29_09995	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
LKW29_10030	COG0693	protein deglycase activity
LKW29_10060	COG2814	Major facilitator Superfamily
LKW29_10075	COG0584	glycerophosphoryl diester phosphodiesterase
LKW29_10125	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
LKW29_10135	COG2223	nitrite transmembrane transporter activity
LKW29_10150	COG2816	NAD+ diphosphatase activity
LKW29_10155	COG0592	DNA-directed DNA polymerase activity
LKW29_10160	COG1051	belongs to the nudix hydrolase family
LKW29_10195	COG3878	Protein conserved in bacteria
LKW29_10245	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LKW29_10260	COG0322	excinuclease ABC activity
LKW29_10300	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LKW29_10325	COG1011	Hydrolase
LKW29_10340	COG0657	acetylesterase activity
LKW29_10345	COG0076	glutamate decarboxylase activity
LKW29_10360	COG1523	belongs to the glycosyl hydrolase 13 family
LKW29_10365	COG3227	Zinc metalloprotease (Elastase)
LKW29_10385	COG0201	protein transport
LKW29_10395	COG0697	spore germination
LKW29_10400	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LKW29_10430	COG4129	membrane
LKW29_10435	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LKW29_10450	COG2959	enzyme of heme biosynthesis
LKW29_10470	COG3483	tryptophan 2,3-dioxygenase activity
LKW29_10475	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
LKW29_10480	COG3844	kynureninase activity
LKW29_10485	COG1309	transcriptional regulator
LKW29_10515	COG3284	Transcriptional regulator
LKW29_10535	COG1349	DNA-binding transcription factor activity
LKW29_10555	COG1959	2 iron, 2 sulfur cluster binding
LKW29_10570	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LKW29_10575	COG0508	dehydrogenase complex catalyzes the overall conversion of
LKW29_10580	COG0022	dehydrogenase e1 component
LKW29_10585	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
LKW29_10595	COG1028	Short-chain dehydrogenase reductase Sdr
LKW29_10600	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
LKW29_10600	COG0456	acetyltransferase
LKW29_10630	COG4176	ABC-type proline glycine betaine transport system permease component
LKW29_10635	COG4175	Glycine betaine
LKW29_10635	COG0517	IMP dehydrogenase activity
LKW29_10660	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
LKW29_10665	COG2153	protein acetylation
LKW29_10670	COG3397	chitin binding
LKW29_10685	COG2205	protein histidine kinase activity
LKW29_10710	COG2333	competence protein COMEC
LKW29_10710	COG0658	competence protein
LKW29_10760	COG3973	AAA domain
LKW29_10775	COG2105	PFAM AIG2 family protein
LKW29_10780	COG0514	ATP-dependent DNA helicase (RecQ)
LKW29_10800	COG4637	Psort location Cytoplasmic, score
LKW29_10825	COG3397	chitin binding
LKW29_10840	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
LKW29_10845	COG1115	amino acid carrier protein
LKW29_10850	COG1012	belongs to the aldehyde dehydrogenase family
LKW29_10855	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LKW29_10865	COG3938	Belongs to the proline racemase family
LKW29_10870	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LKW29_10910	COG0586	Pfam SNARE associated Golgi protein
LKW29_10925	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
LKW29_10930	COG0519	Catalyzes the synthesis of GMP from XMP
LKW29_10935	COG4166	transmembrane transport
LKW29_10945	COG4948	Mandelate Racemase Muconate Lactonizing
LKW29_10990	COG2936	dipeptidyl-peptidase activity
LKW29_10995	COG5002	protein histidine kinase activity
LKW29_11000	COG0745	RESPONSE REGULATOR receiver
LKW29_11045	COG1307	EDD domain protein, DegV family
LKW29_11065	COG2814	Major facilitator Superfamily
LKW29_11075	COG1664	Polymer-forming cytoskeletal
LKW29_11080	COG0789	Transcriptional regulator
LKW29_11085	COG4533	DNA binding
LKW29_11090	COG0477	Major facilitator Superfamily
LKW29_11090	COG2814	Major facilitator Superfamily
LKW29_11110	COG2261	transglycosylase associated protein
LKW29_11125	COG2226	methyltransferase
LKW29_11160	COG0436	Aminotransferase
LKW29_11165	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
LKW29_11170	COG5146	pantothenate kinase activity
LKW29_11190	COG1131	(ABC) transporter
LKW29_11235	COG0628	permease
LKW29_11250	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LKW29_11255	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LKW29_11260	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
LKW29_11265	COG1116	anion transmembrane transporter activity
LKW29_11285	COG2816	NAD+ diphosphatase activity
LKW29_11305	COG2746	aminoglycoside 3-N-acetyltransferase activity
LKW29_11330	COG0697	spore germination
LKW29_11335	COG2318	DinB family
LKW29_11355	COG4912	Dna alkylation repair
LKW29_11375	COG0861	Integral membrane protein TerC family
LKW29_11380	COG1368	sulfuric ester hydrolase activity
LKW29_11385	COG0488	(ABC) transporter
LKW29_11400	COG1309	transcriptional regulator
LKW29_11415	COG0287	Prephenate dehydrogenase
LKW29_11420	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
LKW29_11425	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
LKW29_11430	COG1605	Chorismate mutase
LKW29_11430	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
LKW29_11465	COG3584	3D domain protein
LKW29_11465	COG1388	LysM domain
LKW29_11475	COG1595	DNA-templated transcription, initiation
LKW29_11500	COG1879	ABC-type sugar transport system periplasmic component
LKW29_11510	COG1172	Belongs to the binding-protein-dependent transport system permease family
LKW29_11520	COG2390	Transcriptional regulator
LKW29_11525	COG1070	Carbohydrate kinase
LKW29_11555	COG2329	Antibiotic biosynthesis monooxygenase
LKW29_11575	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LKW29_11585	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
LKW29_11590	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LKW29_11595	COG4187	Peptidase family M20/M25/M40
LKW29_11600	COG1414	Transcriptional regulator
LKW29_11605	COG0833	amino acid
LKW29_11610	COG1690	Belongs to the RtcB family
LKW29_11615	COG3239	Fatty acid desaturase
LKW29_11620	COG1785	Belongs to the alkaline phosphatase family
LKW29_11630	COG3655	Transcriptional regulator
LKW29_11645	COG4377	Putative membrane peptidase family (DUF2324)
LKW29_11655	COG3279	Response regulator of the LytR AlgR family
LKW29_11665	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LKW29_11670	COG0346	lactoylglutathione lyase activity
LKW29_11690	COG0714	Associated with various cellular activities
LKW29_11715	COG0463	Glycosyl transferase, family 2
LKW29_11745	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
LKW29_11750	COG0753	catalase activity
LKW29_11760	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
LKW29_11785	COG0714	Associated with various cellular activities
LKW29_11795	COG0778	Nitroreductase
LKW29_11800	COG1846	Transcriptional regulator
LKW29_11835	COG1725	Transcriptional regulator
LKW29_11845	COG1136	(ABC) transporter
LKW29_11845	COG0577	efflux transmembrane transporter activity
LKW29_11870	COG2207	Transcriptional regulator
LKW29_11875	COG0456	acetyltransferase
LKW29_11895	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LKW29_11915	COG0642	Histidine kinase
LKW29_11920	COG0745	RESPONSE REGULATOR receiver
LKW29_11925	COG0596	Alpha beta hydrolase
LKW29_11955	COG0730	response to heat
LKW29_11965	COG0833	amino acid
LKW29_11975	COG4335	DNA alkylation repair
LKW29_12015	COG0768	penicillin binding
LKW29_12025	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
LKW29_12060	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
LKW29_12065	COG1414	Transcriptional regulator
LKW29_12080	COG0860	N-Acetylmuramoyl-L-alanine amidase
LKW29_12085	COG0640	Transcriptional regulator
LKW29_12095	COG1960	acyl-CoA dehydrogenase activity
LKW29_12110	COG3314	Sporulation integral membrane protein YlbJ
LKW29_12125	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
LKW29_12140	COG3848	Pyruvate phosphate dikinase
LKW29_12140	COG0574	Belongs to the PEP-utilizing enzyme family
LKW29_12145	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LKW29_12160	COG5577	PFAM Coat F domain
LKW29_12165	COG3403	YqcI/YcgG family
LKW29_12170	COG1280	lysine exporter protein (LysE YggA)
LKW29_12205	COG1063	alcohol dehydrogenase
LKW29_12220	COG1027	Aspartate ammonia-lyase
LKW29_12225	COG0252	asparaginase activity
LKW29_12230	COG1396	sequence-specific DNA binding
LKW29_12240	COG0322	excinuclease ABC activity
LKW29_12245	COG0531	amino acid
LKW29_12250	COG1114	Component of the transport system for branched-chain amino acids
LKW29_12255	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LKW29_12265	COG0281	malic enzyme
LKW29_12280	COG0531	amino acid
LKW29_12290	COG0784	Response regulator, receiver
LKW29_12300	COG2066	Belongs to the glutaminase family
LKW29_12305	COG1115	amino acid carrier protein
LKW29_12335	COG0737	Belongs to the 5'-nucleotidase family
LKW29_12340	COG0753	catalase activity
LKW29_12345	COG2267	carboxylic ester hydrolase activity
LKW29_12350	COG1335	isochorismatase
LKW29_12370	COG0583	DNA-binding transcription factor activity
LKW29_12380	COG0598	Magnesium transport protein CorA
LKW29_12420	COG0415	Belongs to the DNA photolyase family
LKW29_12425	COG0288	reversible hydration of carbon dioxide
LKW29_12435	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
LKW29_12440	COG5609	conserved protein (DUF2294)
LKW29_12455	COG1575	Belongs to the MenA family. Type 1 subfamily
LKW29_12460	COG2267	carboxylic ester hydrolase activity
LKW29_12465	COG0803	Belongs to the bacterial solute-binding protein 9 family
LKW29_12470	COG1108	ABC-type Mn2 Zn2 transport systems permease components
LKW29_12475	COG1121	(ABC) transporter
LKW29_12505	COG0798	PFAM Bile acid sodium symporter
LKW29_12510	COG0346	lactoylglutathione lyase activity
LKW29_12515	COG0640	Transcriptional regulator
LKW29_12530	COG0443	Heat shock 70 kDa protein
LKW29_12545	COG1522	sequence-specific DNA binding
LKW29_12560	COG0346	lactoylglutathione lyase activity
LKW29_12580	COG2169	Transcriptional regulator
LKW29_12625	COG2814	Major facilitator Superfamily
LKW29_12650	COG0745	RESPONSE REGULATOR receiver
LKW29_12655	COG5002	protein histidine kinase activity
LKW29_12655	COG3850	Histidine kinase
LKW29_12680	COG2515	1-aminocyclopropane-1-carboxylate deaminase
LKW29_12700	COG1476	TRANSCRIPTIONal
LKW29_12715	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LKW29_12720	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LKW29_12730	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LKW29_12735	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
LKW29_12750	COG1136	(ABC) transporter
LKW29_12755	COG0577	efflux transmembrane transporter activity
LKW29_12770	COG5002	protein histidine kinase activity
LKW29_12770	COG3850	Histidine kinase
LKW29_12780	COG2364	Membrane
LKW29_12785	COG1846	Transcriptional regulator
LKW29_12795	COG2808	Putative FMN-binding domain
LKW29_12800	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LKW29_12805	COG2271	Major facilitator Superfamily
LKW29_12810	COG1556	Lactate utilization protein
LKW29_12815	COG1139	Iron-sulfur cluster binding protein
LKW29_12825	COG0583	DNA-binding transcription factor activity
LKW29_12835	COG1619	proteins homologs of microcin C7 resistance protein MccF
LKW29_12865	COG0561	phosphatase activity
LKW29_12875	COG1609	Transcriptional regulator
LKW29_12880	COG0457	Tetratricopeptide repeat
LKW29_12900	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LKW29_12930	COG0534	Mate efflux family protein
LKW29_12950	COG2814	Major facilitator Superfamily
LKW29_12955	COG1309	transcriptional regulator
LKW29_12970	COG0814	amino acid
LKW29_12975	COG1760	l-serine dehydratase
LKW29_12980	COG1760	l-serine dehydratase
LKW29_12990	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
LKW29_12995	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
LKW29_13010	COG1522	sequence-specific DNA binding
LKW29_13015	COG0531	amino acid
LKW29_13035	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
LKW29_13055	COG1595	DNA-templated transcription, initiation
LKW29_13070	COG0662	Cupin 2, conserved barrel domain protein
LKW29_13075	COG2207	Transcriptional regulator
LKW29_13075	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LKW29_13125	COG0477	Major facilitator Superfamily
LKW29_13135	COG1846	Transcriptional regulator
LKW29_13140	COG2814	Major facilitator Superfamily
LKW29_13150	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
LKW29_13155	COG1131	(ABC) transporter
LKW29_13175	COG2076	Multidrug Resistance protein
LKW29_13180	COG1309	transcriptional regulator
LKW29_13190	COG2031	fatty acid transporter
LKW29_13200	COG2249	NAD(P)H dehydrogenase (quinone) activity
LKW29_13230	COG1122	ATPase activity
LKW29_13235	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LKW29_13250	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
LKW29_13255	COG1288	antiporter activity
LKW29_13260	COG2356	endonuclease I
LKW29_13275	COG3620	sequence-specific DNA binding
LKW29_13280	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
LKW29_13285	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
LKW29_13290	COG0124	histidyl-tRNA synthetase
LKW29_13305	COG1733	regulation of RNA biosynthetic process
LKW29_13310	COG0778	Nitroreductase
LKW29_13330	COG1028	Short-chain dehydrogenase reductase Sdr
LKW29_13340	COG1131	(ABC) transporter
LKW29_13365	COG1011	Hydrolase
LKW29_13375	COG2365	Tyrosine phosphatase family
LKW29_13400	COG0346	lactoylglutathione lyase activity
LKW29_13405	COG1940	carbohydrate kinase activity
LKW29_13410	COG0738	Major facilitator superfamily
LKW29_13415	COG0110	maltose O-acetyltransferase activity
LKW29_13425	COG0577	efflux transmembrane transporter activity
LKW29_13425	COG1136	(ABC) transporter
LKW29_13440	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
LKW29_13445	COG0628	permease
LKW29_13465	COG2226	methyltransferase
LKW29_13475	COG0477	Major facilitator Superfamily
LKW29_13505	COG1253	flavin adenine dinucleotide binding
LKW29_13510	COG0789	Transcriptional regulator
LKW29_13515	COG0697	spore germination
LKW29_13520	COG1357	PFAM Pentapeptide repeats (8 copies)
LKW29_13525	COG3813	Protein conserved in bacteria
LKW29_13530	COG2706	6-phosphogluconolactonase activity
LKW29_13535	COG1070	Carbohydrate kinase
LKW29_13545	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
LKW29_13550	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
LKW29_13560	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
LKW29_13565	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
LKW29_13570	COG0604	alcohol dehydrogenase
LKW29_13575	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LKW29_13585	COG0604	alcohol dehydrogenase
LKW29_13585	COG3321	synthase
LKW29_13590	COG1028	Short-chain dehydrogenase reductase Sdr
LKW29_13615	COG0656	L-ascorbic acid biosynthetic process
LKW29_13620	COG2814	Major facilitator Superfamily
LKW29_13635	COG0346	lactoylglutathione lyase activity
LKW29_13640	COG0814	amino acid
LKW29_13665	COG1393	Belongs to the ArsC family
LKW29_13670	COG1733	regulation of RNA biosynthetic process
LKW29_13675	COG2188	Transcriptional regulator
LKW29_13680	COG0673	inositol 2-dehydrogenase activity
LKW29_13685	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
LKW29_13690	COG1733	regulation of RNA biosynthetic process
LKW29_13695	COG1733	regulation of RNA biosynthetic process
LKW29_13710	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LKW29_13730	COG0384	phenazine biosynthesis protein PhzF
LKW29_13740	COG1028	Short-chain dehydrogenase reductase Sdr
LKW29_13750	COG0318	PFAM AMP-dependent synthetase and ligase
LKW29_13760	COG1733	regulation of RNA biosynthetic process
LKW29_13790	COG1191	sigma factor activity
LKW29_13805	COG1309	transcriptional regulator
LKW29_13825	COG3152	Membrane
LKW29_13850	COG1151	hydroxylamine reductase activity
LKW29_13860	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LKW29_13865	COG3409	Peptidoglycan-binding domain 1 protein
LKW29_13865	COG3757	hydrolase, family 25
LKW29_13900	COG2072	flavoprotein involved in K transport
LKW29_13935	COG0604	alcohol dehydrogenase
LKW29_13940	COG1113	amino acid transport
LKW29_13945	COG2814	Major facilitator Superfamily
LKW29_13975	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
LKW29_13980	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
LKW29_14005	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LKW29_14010	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LKW29_14020	COG0384	phenazine biosynthesis protein PhzF
LKW29_14050	COG0583	DNA-binding transcription factor activity
LKW29_14070	COG1193	negative regulation of DNA recombination
LKW29_14085	COG2162	N-hydroxyarylamine O-acetyltransferase activity
LKW29_14090	COG1164	Oligoendopeptidase f
LKW29_14095	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
LKW29_14125	COG0584	glycerophosphoryl diester phosphodiesterase
LKW29_14150	COG0640	Transcriptional regulator
LKW29_14155	COG0604	alcohol dehydrogenase
LKW29_14175	COG2808	Putative FMN-binding domain
LKW29_14190	COG0385	Bile acid
LKW29_14195	COG0277	FAD linked oxidase domain protein
LKW29_14225	COG1216	Glycosyl transferase, family 2
LKW29_14230	COG1024	Enoyl-CoA hydratase
LKW29_14240	COG1285	pathogenesis
LKW29_14255	COG2514	catechol 2,3-dioxygenase activity
LKW29_14260	COG2720	vancomycin resistance protein
LKW29_14300	COG0716	FMN binding
LKW29_14330	COG1028	Short-chain dehydrogenase reductase Sdr
LKW29_14355	COG4145	pantothenate transmembrane transporter activity
LKW29_14365	COG1012	belongs to the aldehyde dehydrogenase family
LKW29_14370	COG1028	Short-chain dehydrogenase reductase Sdr
LKW29_14380	COG1657	PFAM Prenyltransferase squalene oxidase
LKW29_14385	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
LKW29_14390	COG2962	Rard protein
LKW29_14395	COG3326	Membrane
LKW29_14410	COG0489	protein tyrosine kinase activity
LKW29_14420	COG0314	molybdopterin synthase activity
LKW29_14425	COG0303	'Molybdopterin
LKW29_14430	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
LKW29_14435	COG2116	formate transmembrane transporter activity
LKW29_14445	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
LKW29_14450	COG5609	conserved protein (DUF2294)
LKW29_14455	COG2427	Protein of unknown function (DUF1641)
LKW29_14460	COG3383	formate dehydrogenase (NAD+) activity
LKW29_14470	COG0697	spore germination
LKW29_14510	COG2226	methyltransferase
LKW29_14515	COG4166	transmembrane transport
LKW29_14520	COG4166	transmembrane transport
LKW29_14525	COG1301	dicarboxylic acid transport
LKW29_14530	COG1316	TRANSCRIPTIONal
LKW29_14540	COG1595	DNA-templated transcription, initiation
LKW29_14560	COG1131	(ABC) transporter
LKW29_14570	COG0673	inositol 2-dehydrogenase activity
LKW29_14575	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LKW29_14580	COG0187	DNA topoisomerase II activity
LKW29_14585	COG1832	CoA-binding protein
LKW29_14590	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LKW29_14595	COG0745	RESPONSE REGULATOR receiver
LKW29_14610	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
LKW29_14615	COG4841	protein insertion into membrane
LKW29_14620	COG0824	Thioesterase
LKW29_14650	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LKW29_14660	COG2274	protein secretion by the type I secretion system
LKW29_14665	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
LKW29_14705	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
LKW29_14720	COG0183	Belongs to the thiolase family
LKW29_14725	COG0318	PFAM AMP-dependent synthetase and ligase
LKW29_14730	COG1268	BioY protein
LKW29_14735	COG0318	PFAM AMP-dependent synthetase and ligase
LKW29_14785	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LKW29_14795	COG5002	protein histidine kinase activity
LKW29_14800	COG0400	carboxylic ester hydrolase activity
LKW29_14805	COG0346	lactoylglutathione lyase activity
LKW29_14810	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LKW29_14815	COG0069	glutamate synthase activity
LKW29_14820	COG1902	pentaerythritol trinitrate reductase activity
LKW29_14825	COG1329	Transcriptional regulator
LKW29_14830	COG0010	Belongs to the arginase family
LKW29_14855	COG2226	methyltransferase
LKW29_14890	COG4846	Membrane protein involved in cytochrome C biogenesis
LKW29_14895	COG0785	Cytochrome C biogenesis protein
LKW29_14905	COG0583	DNA-binding transcription factor activity
LKW29_14910	COG1380	Effector of murein hydrolase LrgA
LKW29_14915	COG1346	cytolysis
LKW29_14940	COG5632	N-Acetylmuramoyl-L-alanine amidase
LKW29_14940	COG3409	Peptidoglycan-binding domain 1 protein
LKW29_14955	COG1132	(ABC) transporter
LKW29_14960	COG1132	(ABC) transporter
LKW29_14990	COG3639	organic phosphonate transmembrane transporter activity
LKW29_14995	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
LKW29_15015	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
LKW29_15035	COG1695	Transcriptional regulator
LKW29_15075	COG1388	LysM domain
LKW29_15075	COG3409	Peptidoglycan-binding domain 1 protein
LKW29_15075	COG5632	N-Acetylmuramoyl-L-alanine amidase
LKW29_15080	COG4824	toxin secretion phage lysis holin
LKW29_15225	COG1595	DNA-templated transcription, initiation
LKW29_15270	COG1351	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NAD(P)H and FADH(2) as the reductant
LKW29_15350	COG1396	sequence-specific DNA binding
LKW29_15375	COG0174	glutamine synthetase
LKW29_15380	COG0789	Transcriptional regulator
LKW29_15385	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
LKW29_15390	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LKW29_15395	COG2860	membrane
LKW29_15400	COG0464	growth
LKW29_15430	COG3584	3D domain protein
LKW29_15430	COG1388	LysM domain
LKW29_15435	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LKW29_15435	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LKW29_15435	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LKW29_15445	COG1349	DNA-binding transcription factor activity
LKW29_15455	COG2322	membrane
LKW29_15465	COG1113	amino acid transport
LKW29_15480	COG1408	metallophosphoesterase
LKW29_15485	COG2116	formate transmembrane transporter activity
LKW29_15495	COG2217	Heavy metal translocating P-type atpase
LKW29_15500	COG2608	mercury ion transmembrane transporter activity
LKW29_15505	COG1937	Protein conserved in bacteria
LKW29_15515	COG2819	hydrolase of the alpha beta superfamily
LKW29_15520	COG1120	ATPase activity
LKW29_15525	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LKW29_15530	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LKW29_15545	COG2169	Transcriptional regulator
LKW29_15550	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
LKW29_15555	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
LKW29_15565	COG2364	Membrane
LKW29_15585	COG0346	lactoylglutathione lyase activity
LKW29_15605	COG1346	cytolysis
LKW29_15610	COG1380	Effector of murein hydrolase LrgA
LKW29_15615	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LKW29_15620	COG0508	dehydrogenase complex catalyzes the overall conversion of
LKW29_15620	COG0596	Alpha beta hydrolase
LKW29_15625	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
LKW29_15645	COG1404	Belongs to the peptidase S8 family
LKW29_15650	COG3773	Cell wall hydrolase
LKW29_15655	COG0562	UDP-galactopyranose mutase
LKW29_15660	COG1368	sulfuric ester hydrolase activity
LKW29_15665	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
LKW29_15675	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
LKW29_15700	COG1131	(ABC) transporter
LKW29_15720	COG4550	Control of competence regulator ComK, YlbF/YmcA
LKW29_15725	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
LKW29_15730	COG1013	pyruvate-flavodoxin oxidoreductase activity
LKW29_15735	COG0674	pyruvate-flavodoxin oxidoreductase activity
LKW29_15735	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
LKW29_15745	COG2359	stage V sporulation protein S
LKW29_15750	COG1692	metallophosphoesterase
LKW29_15775	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LKW29_15780	COG1426	Protein conserved in bacteria
LKW29_15795	COG0300	oxidoreductase activity
LKW29_15800	COG0612	Peptidase, M16
LKW29_15805	COG0612	Peptidase, M16
LKW29_15810	COG1079	Belongs to the binding-protein-dependent transport system permease family
LKW29_15820	COG3845	ABC transporter
LKW29_15825	COG1744	ABC transporter substrate-binding protein PnrA-like
LKW29_15830	COG2188	Transcriptional regulator
LKW29_15835	COG1674	ftsk spoiiie
LKW29_15845	COG0740	serine-type endopeptidase activity
LKW29_15850	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LKW29_15860	COG0527	aspartate kinase activity
LKW29_15865	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
LKW29_15870	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
LKW29_15875	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LKW29_15880	COG1873	PFAM PRC-barrel domain
LKW29_15885	COG0612	Peptidase, M16
LKW29_15890	COG0726	polysaccharide deacetylase
LKW29_15905	COG0196	riboflavin kinase activity
LKW29_15910	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
LKW29_15920	COG1550	Protein conserved in bacteria
LKW29_15930	COG1358	cellular component organization or biogenesis
LKW29_15935	COG2740	Nucleic-acid-binding protein implicated in transcription termination
LKW29_15940	COG0195	Participates in both transcription termination and antitermination
LKW29_15960	COG0750	zinc metalloprotease
LKW29_15970	COG4589	Belongs to the CDS family
LKW29_15985	COG0528	UMP kinase activity
LKW29_16015	COG4974	Belongs to the 'phage' integrase family
LKW29_16025	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LKW29_16035	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
LKW29_16075	COG1837	Belongs to the UPF0109 family
LKW29_16085	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
LKW29_16095	COG0552	protein localization to endoplasmic reticulum
LKW29_16100	COG1196	nuclear chromosome segregation
LKW29_16110	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LKW29_16115	COG1028	Short-chain dehydrogenase reductase Sdr
LKW29_16120	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
LKW29_16135	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
LKW29_16140	COG1461	Dihydroxyacetone kinase
LKW29_16145	COG1302	Protein conserved in bacteria
LKW29_16160	COG1564	THIamine pyrophosphokinase
LKW29_16165	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
LKW29_16170	COG1162	GTPase activity
LKW29_16175	COG0515	serine threonine protein kinase
LKW29_16175	COG2815	serine threonine protein kinase
LKW29_16180	COG0631	protein serine/threonine phosphatase activity
LKW29_16190	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
LKW29_16190	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LKW29_16200	COG0242	peptide deformylase activity
LKW29_16205	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
LKW29_16210	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
LKW29_16230	COG1561	YicC-like family, N-terminal region
LKW29_16235	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
LKW29_16260	COG3069	C4-dicarboxylate transmembrane transporter activity
LKW29_16325	COG0564	pseudouridine synthase activity
LKW29_16345	COG3599	regulation of cell shape
LKW29_16350	COG2302	S4 RNA-binding domain
LKW29_16355	COG0762	integral membrane protein
LKW29_16365	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
LKW29_16370	COG1496	oxidoreductase activity
LKW29_16375	COG1873	PFAM PRC-barrel domain
LKW29_16380	COG1191	sigma factor activity
LKW29_16385	COG1191	sigma factor activity
LKW29_16395	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
LKW29_16400	COG0849	cell division
LKW29_16405	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
LKW29_16410	COG0812	UDP-N-acetylmuramate dehydrogenase activity
LKW29_16420	COG0772	Belongs to the SEDS family
LKW29_16435	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
LKW29_16440	COG0768	penicillin binding
LKW29_16445	COG0768	penicillin binding
LKW29_16450	COG4839	cell division protein FtsL
LKW29_16465	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
LKW29_16480	COG0333	Belongs to the bacterial ribosomal protein bL32 family
LKW29_16485	COG1399	metal-binding, possibly nucleic acid-binding protein
LKW29_16535	COG4824	toxin secretion phage lysis holin
LKW29_16625	COG4626	Terminase
LKW29_16625	COG1802	Transcriptional regulator
LKW29_16650	COG0582	viral genome integration into host DNA
LKW29_16715	COG0756	dUTP diphosphatase activity
LKW29_16730	COG1191	sigma factor activity
LKW29_16755	COG1484	DNA-dependent DNA replication
LKW29_16780	COG1396	sequence-specific DNA binding
LKW29_16795	COG1396	sequence-specific DNA binding
LKW29_16810	COG0582	viral genome integration into host DNA
LKW29_16820	COG3480	Lon protease (S16) C-terminal proteolytic domain
LKW29_16825	COG1752	Esterase of the alpha-beta hydrolase superfamily
LKW29_16830	COG3314	Sporulation integral membrane protein YlbJ
LKW29_16840	COG0742	ribosomal rna small subunit methyltransferase
LKW29_16855	COG3679	Belongs to the UPF0342 family
LKW29_16860	COG0406	alpha-ribazole phosphatase activity
LKW29_16875	COG2340	Cysteine-rich secretory protein family
LKW29_16890	COG3336	cytochrome c oxidase
LKW29_16925	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
LKW29_16930	COG0772	Belongs to the SEDS family
LKW29_16940	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
LKW29_16945	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
LKW29_16955	COG4896	Protein conserved in bacteria
LKW29_16970	COG1217	gtp-binding protein TYPA
LKW29_16980	COG0483	inositol monophosphate 1-phosphatase activity
LKW29_17000	COG1982	Orn Lys Arg decarboxylase major
LKW29_17050	COG0022	dehydrogenase e1 component
LKW29_17055	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
LKW29_17065	COG0242	peptide deformylase activity
LKW29_17080	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LKW29_17085	COG0569	domain protein
LKW29_17105	COG0583	DNA-binding transcription factor activity
LKW29_17110	COG0517	IMP dehydrogenase activity
LKW29_17120	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
LKW29_17130	COG4703	Protein of unknown function (DUF1797)
LKW29_17145	COG2200	EAL domain
LKW29_17150	COG1028	Short-chain dehydrogenase reductase Sdr
LKW29_17155	COG1408	metallophosphoesterase
LKW29_17200	COG2814	Major facilitator Superfamily
LKW29_17220	COG3209	COG3209 Rhs family protein
LKW29_17230	COG2205	protein histidine kinase activity
LKW29_17240	COG0436	Aminotransferase
LKW29_17245	COG1609	Transcriptional regulator
LKW29_17250	COG3833	ABC-type maltose transport systems, permease component
LKW29_17255	COG1175	transmembrane transport
LKW29_17260	COG2182	Extracellular solute-binding protein
LKW29_17270	COG0366	Alpha amylase catalytic
LKW29_17275	COG3842	ATPase activity
LKW29_17315	COG0183	Belongs to the thiolase family
LKW29_17350	COG1695	Transcriptional regulator
LKW29_17355	COG1028	Short-chain dehydrogenase reductase Sdr
LKW29_17365	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
LKW29_17375	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LKW29_17380	COG0436	Aminotransferase
LKW29_17400	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
LKW29_17420	COG2199	diguanylate cyclase activity
LKW29_17425	COG0778	Nitroreductase
LKW29_17450	COG1263	PTS System
LKW29_17450	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LKW29_17450	COG2190	(PTS) system
LKW29_17455	COG3711	transcriptional antiterminator
LKW29_17465	COG2188	Transcriptional regulator
LKW29_17475	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
LKW29_17500	COG1547	Domain of unknown function (DUF309)
LKW29_17505	COG0456	acetyltransferase
LKW29_17515	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LKW29_17520	COG4086	secreted protein
LKW29_17525	COG0561	phosphatase activity
LKW29_17530	COG0697	spore germination
LKW29_17545	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LKW29_17570	COG0733	neurotransmitter:sodium symporter activity
LKW29_17590	COG1686	Belongs to the peptidase S11 family
LKW29_17595	COG1725	Transcriptional regulator
LKW29_17600	COG1131	(ABC) transporter
LKW29_17615	COG1846	Transcriptional regulator
LKW29_17630	COG0598	Magnesium transport protein CorA
LKW29_17665	COG0735	belongs to the Fur family
LKW29_17670	COG1300	Membrane
LKW29_17690	COG0667	Aldo Keto reductase
LKW29_17695	COG0656	L-ascorbic acid biosynthetic process
LKW29_17700	COG0456	acetyltransferase
LKW29_17700	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
LKW29_17710	COG0737	Belongs to the 5'-nucleotidase family
LKW29_17710	COG4085	toxin activity
LKW29_17710	COG1525	nuclease
LKW29_17720	COG0596	Alpha beta hydrolase
LKW29_17725	COG2056	Na+-H+ antiporter family
LKW29_17730	COG1609	Transcriptional regulator
LKW29_17735	COG0456	acetyltransferase
LKW29_17740	COG1073	alpha beta
LKW29_17755	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LKW29_17755	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LKW29_17760	COG0307	riboflavin synthase, alpha
LKW29_17785	COG4106	trans-aconitate 2-methyltransferase activity
LKW29_17790	COG1073	alpha beta
LKW29_17790	COG2226	methyltransferase
LKW29_17805	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
LKW29_17815	COG1757	Na H antiporter
LKW29_17820	COG0737	Belongs to the 5'-nucleotidase family
LKW29_17830	COG1522	sequence-specific DNA binding
LKW29_17850	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
LKW29_17860	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
LKW29_17875	COG0300	oxidoreductase activity
LKW29_17880	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LKW29_17885	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LKW29_17890	COG1760	l-serine dehydratase
LKW29_17895	COG1760	l-serine dehydratase
LKW29_17915	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LKW29_17925	COG2195	Cleaves the N-terminal amino acid of tripeptides
LKW29_17930	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LKW29_17945	COG1376	ErfK ybiS ycfS ynhG family protein
LKW29_17950	COG4129	membrane
LKW29_17955	COG1126	abc transporter atp-binding protein
LKW29_17960	COG0765	amino acid transport
LKW29_17965	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LKW29_17980	COG2816	NAD+ diphosphatase activity
LKW29_17985	COG0772	Belongs to the SEDS family
LKW29_17990	COG0508	dehydrogenase complex catalyzes the overall conversion of
LKW29_17995	COG0022	dehydrogenase e1 component
LKW29_18000	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
LKW29_18005	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LKW29_18020	COG0280	phosphate acetyltransferase
LKW29_18025	COG3290	protein histidine kinase activity
LKW29_18025	COG3829	transcription factor binding
LKW29_18035	COG0584	glycerophosphoryl diester phosphodiesterase
LKW29_18040	COG3093	addiction module antidote protein HigA
LKW29_18050	COG0745	RESPONSE REGULATOR receiver
LKW29_18055	COG0750	zinc metalloprotease
LKW29_18060	COG0497	DNA recombination
LKW29_18070	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
LKW29_18080	COG0142	geranyltranstransferase activity
LKW29_18105	COG1302	Protein conserved in bacteria
LKW29_18110	COG0439	Biotin carboxylase
LKW29_18115	COG0511	ligase activity, forming carbon-carbon bonds
LKW29_18160	COG3854	ATPases associated with a variety of cellular activities
LKW29_18185	COG0006	proline dipeptidase activity
LKW29_18200	COG3872	metal-dependent enzyme
LKW29_18210	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LKW29_18230	COG0095	Lipoate-protein ligase
LKW29_18235	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LKW29_18240	COG1609	Transcriptional regulator
LKW29_18250	COG2076	Multidrug Resistance protein
LKW29_18255	COG2076	Multidrug Resistance protein
LKW29_18290	COG1131	(ABC) transporter
LKW29_18295	COG1725	Transcriptional regulator
LKW29_18325	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
LKW29_18380	COG4970	Tfp pilus assembly protein FimT
LKW29_18390	COG1459	type II secretion system
LKW29_18395	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
LKW29_18445	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
LKW29_18455	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
LKW29_18455	COG0646	methionine synthase
LKW29_18460	COG0626	cystathionine gamma-synthase activity
LKW29_18465	COG0626	cystathionine gamma-synthase activity
LKW29_18485	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LKW29_18495	COG1940	carbohydrate kinase activity
LKW29_18500	COG4483	Protein conserved in bacteria
LKW29_18505	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
LKW29_18510	COG0267	Belongs to the bacterial ribosomal protein bL33 family
LKW29_18515	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
LKW29_18520	COG0704	Plays a role in the regulation of phosphate uptake
LKW29_18530	COG0581	inorganic phosphate transmembrane transporter activity
LKW29_18535	COG0573	inorganic phosphate transmembrane transporter activity
LKW29_18540	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
LKW29_18545	COG0768	penicillin binding
LKW29_18550	COG0477	Major facilitator Superfamily
LKW29_18555	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
LKW29_18580	COG0735	belongs to the Fur family
LKW29_18585	COG1108	ABC-type Mn2 Zn2 transport systems permease components
LKW29_18590	COG1121	(ABC) transporter
LKW29_18595	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LKW29_18625	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
LKW29_18630	COG2384	SAM-dependent methyltransferase
LKW29_18635	COG2010	Cytochrome c
LKW29_18640	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
LKW29_18645	COG0358	DNA primase activity
LKW29_18655	COG0517	IMP dehydrogenase activity
LKW29_18670	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
LKW29_18675	COG0295	cytidine deaminase activity
LKW29_18680	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
LKW29_18690	COG1480	7TM receptor with intracellular HD hydrolase
LKW29_18695	COG1702	phosphate starvation-inducible protein PhoH
LKW29_18710	COG1610	YqeY-like protein
LKW29_18715	COG0828	Belongs to the bacterial ribosomal protein bS21 family
LKW29_18720	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
LKW29_18725	COG1385	rRNA (uridine-N3-)-methyltransferase activity
LKW29_18760	COG1733	regulation of RNA biosynthetic process
LKW29_18785	COG1466	dna polymerase III delta subunit
LKW29_18795	COG2333	competence protein COMEC
LKW29_18795	COG0658	competence protein
LKW29_18800	COG2131	deaminase
LKW29_18805	COG1555	photosystem II stabilization
LKW29_18805	COG1596	polysaccharide export
LKW29_18810	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LKW29_18815	COG2226	methyltransferase
LKW29_18820	COG0799	negative regulation of ribosome biogenesis
LKW29_18825	COG1713	HD superfamily hydrolase involved in NAD metabolism
LKW29_18835	COG1534	Rna-binding protein
LKW29_18845	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
LKW29_18850	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
LKW29_18875	COG1595	DNA-templated transcription, initiation
LKW29_18885	COG0778	Nitroreductase
LKW29_18890	COG2357	RelA SpoT domain protein
LKW29_18900	COG1785	Belongs to the alkaline phosphatase family
LKW29_18910	COG2267	carboxylic ester hydrolase activity
LKW29_18945	COG1404	Belongs to the peptidase S8 family
LKW29_18950	COG3186	Phenylalanine-4-hydroxylase
LKW29_18960	COG2514	catechol 2,3-dioxygenase activity
LKW29_18965	COG2259	Doxx family
LKW29_19005	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LKW29_19015	COG1454	alcohol dehydrogenase
LKW29_19015	COG1012	belongs to the aldehyde dehydrogenase family
LKW29_19020	COG0626	cystathionine gamma-synthase activity
LKW29_19025	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
LKW29_19050	COG0768	penicillin binding
LKW29_19065	COG0826	peptidase U32
LKW29_19070	COG0826	peptidase U32
LKW29_19075	COG4122	O-methyltransferase activity
LKW29_19080	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
LKW29_19100	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
LKW29_19110	COG0628	permease
LKW29_19140	COG0482	sulfurtransferase activity
LKW29_19145	COG1104	cysteine desulfurase activity
LKW29_19150	COG1959	2 iron, 2 sulfur cluster binding
LKW29_19155	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
LKW29_19165	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
LKW29_19190	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LKW29_19200	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
LKW29_19200	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
LKW29_19205	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
LKW29_19210	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LKW29_19210	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LKW29_19220	COG2244	polysaccharide biosynthetic process
LKW29_19235	COG1862	Preprotein translocase
LKW29_19265	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
LKW29_19275	COG0697	spore germination
LKW29_19280	COG0697	spore germination
LKW29_19285	COG0640	Transcriptional regulator
LKW29_19310	COG0157	Belongs to the NadC ModD family
LKW29_19315	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
LKW29_19320	COG1104	cysteine desulfurase activity
LKW29_19325	COG1827	regulation of RNA biosynthetic process
LKW29_19330	COG2258	MOSC domain
LKW29_19335	COG0077	Prephenate dehydratase
LKW29_19340	COG0577	efflux transmembrane transporter activity
LKW29_19345	COG0577	efflux transmembrane transporter activity
LKW29_19350	COG1136	(ABC) transporter
LKW29_19360	COG0745	RESPONSE REGULATOR receiver
LKW29_19365	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
LKW29_19370	COG3290	protein histidine kinase activity
LKW29_19380	COG2868	ribosomal protein
LKW29_19390	COG1530	ribonuclease E activity
LKW29_19395	COG1994	Peptidase M50
LKW29_19400	COG0739	heme binding
LKW29_19405	COG2894	cell division
LKW29_19425	COG1077	Cell shape determining protein MreB Mrl
LKW29_19445	COG0285	dihydrofolate synthase activity
LKW29_19450	COG0525	valine-tRNA ligase activity
LKW29_19460	COG1388	LysM domain
LKW29_19470	COG0113	porphobilinogen synthase activity
LKW29_19475	COG1587	Uroporphyrinogen-III synthase
LKW29_19485	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
LKW29_19495	COG1846	Transcriptional regulator
LKW29_19500	COG1764	response to oxidative stress
LKW29_19515	COG0470	DNA polymerase III
LKW29_19515	COG1067	ATP-dependent peptidase activity
LKW29_19560	COG0622	Phosphoesterase
LKW29_19575	COG5401	PFAM Sporulation and spore germination
LKW29_19595	COG1309	transcriptional regulator
LKW29_19610	COG2197	response regulator
LKW29_19615	COG2233	PERMEase
LKW29_19625	COG0402	S-adenosylhomocysteine deaminase activity
LKW29_19630	COG0402	S-adenosylhomocysteine deaminase activity
LKW29_19640	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LKW29_19650	COG0444	Belongs to the ABC transporter superfamily
LKW29_19655	COG4608	Belongs to the ABC transporter superfamily
LKW29_19660	COG3275	phosphorelay sensor kinase activity
LKW29_19665	COG3279	Response regulator of the LytR AlgR family
LKW29_19680	COG1983	PspC domain protein
LKW29_19685	COG1396	sequence-specific DNA binding
LKW29_19690	COG0697	spore germination
LKW29_19700	COG1959	2 iron, 2 sulfur cluster binding
LKW29_19705	COG1668	transmembrane transport
LKW29_19710	COG4152	abc transporter atp-binding protein
LKW29_19715	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
LKW29_19725	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
LKW29_19730	COG1876	peptidase activity
LKW29_19735	COG0824	Thioesterase
LKW29_19740	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
LKW29_19745	COG1053	succinate dehydrogenase
LKW29_19750	COG2009	succinate dehydrogenase
LKW29_19755	COG1719	4-vinyl reductase, 4VR
LKW29_19765	COG3118	belongs to the thioredoxin family
LKW29_19770	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
LKW29_19775	COG2086	electron transfer activity
LKW29_19780	COG1024	Enoyl-CoA hydratase
LKW29_19785	COG1309	transcriptional regulator
LKW29_19790	COG0318	PFAM AMP-dependent synthetase and ligase
LKW29_19810	COG2318	DinB family
LKW29_19840	COG1131	(ABC) transporter
LKW29_19845	COG2205	protein histidine kinase activity
LKW29_19850	COG0745	RESPONSE REGULATOR receiver
LKW29_19860	COG4895	conserved protein (DUF2196)
LKW29_19865	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
LKW29_19880	COG4509	Sortase family
LKW29_19885	COG1120	ATPase activity
LKW29_19900	COG5386	Cell surface protein
LKW29_19910	COG5386	Cell surface protein
LKW29_19915	COG1114	Component of the transport system for branched-chain amino acids
LKW29_19920	COG1187	pseudouridine synthase activity
LKW29_19930	COG1796	DNA polymerase
LKW29_19930	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
LKW29_19935	COG1286	toxin biosynthetic process
LKW29_19980	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LKW29_19990	COG1418	mRNA catabolic process
LKW29_20015	COG2814	Major facilitator Superfamily
LKW29_20020	COG1566	PFAM secretion protein HlyD family protein
LKW29_20025	COG1309	transcriptional regulator
LKW29_20030	COG1363	Peptidase, m42
LKW29_20055	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
LKW29_20065	COG1484	DNA-dependent DNA replication
LKW29_20070	COG3611	Membrane attachment protein
LKW29_20080	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
LKW29_20085	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
LKW29_20090	COG0237	dephospho-CoA kinase activity
LKW29_20095	COG1971	Probably functions as a manganese efflux pump
LKW29_20105	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LKW29_20105	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LKW29_20110	COG5002	protein histidine kinase activity
LKW29_20115	COG0745	RESPONSE REGULATOR receiver
LKW29_20135	COG0538	isocitrate dehydrogenase activity
LKW29_20140	COG0372	Belongs to the citrate synthase family
LKW29_20150	COG0628	permease
LKW29_20155	COG3030	protein affecting phage T7 exclusion by the F plasmid
LKW29_20180	COG1725	Transcriptional regulator
LKW29_20185	COG0281	malic enzyme
LKW29_20190	COG0587	DNA-directed DNA polymerase activity
LKW29_20205	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
LKW29_20225	COG4109	DRTGG domain
LKW29_20240	COG0006	proline dipeptidase activity
LKW29_20280	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LKW29_20285	COG0662	Cupin 2, conserved barrel domain protein
LKW29_20295	COG1476	TRANSCRIPTIONal
LKW29_20310	COG1028	Short-chain dehydrogenase reductase Sdr
LKW29_20315	COG0589	response to stress
LKW29_20355	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LKW29_20375	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
LKW29_20380	COG0827	DNA restriction-modification system
LKW29_20385	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
LKW29_20390	COG3874	Sporulation protein YtfJ
LKW29_20405	COG1574	metal-dependent hydrolase with the TIM-barrel fold
LKW29_20415	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
LKW29_20430	COG1104	cysteine desulfurase activity
LKW29_20440	COG0583	DNA-binding transcription factor activity
LKW29_20445	COG0697	spore germination
LKW29_20455	COG1956	GAF domain-containing protein
LKW29_20460	COG0626	cystathionine gamma-synthase activity
LKW29_20490	COG1595	DNA-templated transcription, initiation
LKW29_20500	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
LKW29_20505	COG0454	-acetyltransferase
LKW29_20510	COG0517	IMP dehydrogenase activity
LKW29_20515	COG0123	including yeast histone deacetylase and acetoin utilization protein
LKW29_20525	COG0745	RESPONSE REGULATOR receiver
LKW29_20535	COG0666	response to abiotic stimulus
LKW29_20570	COG1609	Transcriptional regulator
LKW29_20575	COG4851	CamS sex pheromone cAM373 precursor
LKW29_20580	COG3118	belongs to the thioredoxin family
LKW29_20590	COG2309	aminopeptidase activity
LKW29_20625	COG1674	ftsk spoiiie
LKW29_20635	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LKW29_20640	COG4848	Belongs to the UPF0354 family
LKW29_20645	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LKW29_20650	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
LKW29_20655	COG1363	Peptidase, m42
LKW29_20665	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LKW29_20680	COG0510	thiamine kinase activity
LKW29_20685	COG1523	belongs to the glycosyl hydrolase 13 family
LKW29_20695	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LKW29_20700	COG1349	DNA-binding transcription factor activity
LKW29_20705	COG1187	pseudouridine synthase activity
LKW29_20710	COG2244	polysaccharide biosynthetic process
LKW29_20715	COG2081	HI0933 family
LKW29_20720	COG2814	Major facilitator Superfamily
LKW29_20730	COG3832	glyoxalase III activity
LKW29_20760	COG4975	Glucose uptake
LKW29_20775	COG0314	molybdopterin synthase activity
LKW29_20780	COG1763	Mo-molybdopterin cofactor biosynthetic process
LKW29_20785	COG0303	'Molybdopterin
LKW29_20795	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
LKW29_20800	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
LKW29_20825	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LKW29_20835	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
LKW29_20880	COG2814	Major facilitator Superfamily
LKW29_20885	COG0475	glutathione-regulated potassium exporter activity
LKW29_20890	COG0490	domain, Protein
LKW29_20905	COG1136	(ABC) transporter
LKW29_20925	COG1242	4 iron, 4 sulfur cluster binding
LKW29_20930	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
LKW29_20935	COG1131	(ABC) transporter
LKW29_20945	COG1794	racemase activity, acting on amino acids and derivatives
LKW29_20965	COG2267	carboxylic ester hydrolase activity
LKW29_20970	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
LKW29_20975	COG0671	phosphoesterase, PA-phosphatase related
LKW29_20980	COG0438	transferase activity, transferring glycosyl groups
LKW29_20990	COG0521	Mo-molybdopterin cofactor biosynthetic process
LKW29_21045	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
LKW29_21050	COG5002	protein histidine kinase activity
LKW29_21055	COG4191	Histidine kinase
LKW29_21060	COG2267	carboxylic ester hydrolase activity
LKW29_21080	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
LKW29_21085	COG1116	anion transmembrane transporter activity
LKW29_21090	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LKW29_21115	COG0494	nUDIX hydrolase
LKW29_21150	COG0288	reversible hydration of carbon dioxide
LKW29_21155	COG1271	oxidase subunit
LKW29_21160	COG1294	oxidase, subunit
LKW29_21180	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LKW29_21205	COG1842	Phage shock protein A
LKW29_21235	COG5002	protein histidine kinase activity
LKW29_21240	COG0745	RESPONSE REGULATOR receiver
LKW29_21265	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
LKW29_21270	COG1597	lipid kinase activity
LKW29_21305	COG0586	Pfam SNARE associated Golgi protein
LKW29_21315	COG0577	efflux transmembrane transporter activity
LKW29_21320	COG1136	(ABC) transporter
LKW29_21325	COG3708	Transcriptional regulator
LKW29_21325	COG2207	Transcriptional regulator
LKW29_21330	COG0745	RESPONSE REGULATOR receiver
LKW29_21335	COG2205	protein histidine kinase activity
LKW29_21340	COG0577	efflux transmembrane transporter activity
LKW29_21345	COG0577	efflux transmembrane transporter activity
LKW29_21350	COG1136	(ABC) transporter
LKW29_21370	COG2188	Transcriptional regulator
LKW29_21390	COG3964	amidohydrolase
LKW29_21420	COG4948	Mandelate Racemase Muconate Lactonizing
LKW29_21430	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
LKW29_21435	COG0596	Alpha beta hydrolase
LKW29_21440	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
LKW29_21445	COG1169	isochorismate synthase
LKW29_21450	COG1575	Belongs to the MenA family. Type 1 subfamily
LKW29_21455	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
LKW29_21475	COG0058	SHG alpha-glucan phosphorylase activity
LKW29_21480	COG0297	glycogen (starch) synthase activity
LKW29_21485	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
LKW29_21600	COG0544	peptidyl-prolyl cis-trans isomerase activity
LKW29_21635	COG1285	pathogenesis
LKW29_21640	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
LKW29_21650	COG0166	Belongs to the GPI family
LKW29_21655	COG2155	Conserved Protein
LKW29_21660	COG1098	S1 RNA binding domain
LKW29_21665	COG0436	Aminotransferase
LKW29_21670	COG1522	sequence-specific DNA binding
LKW29_21675	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LKW29_21680	COG2267	carboxylic ester hydrolase activity
LKW29_21690	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
LKW29_21710	COG5018	Exonuclease
LKW29_21715	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
LKW29_21735	COG2050	protein possibly involved in aromatic compounds catabolism
LKW29_21745	COG1268	BioY protein
LKW29_21755	COG1210	Utp--glucose-1-phosphate uridylyltransferase
LKW29_21760	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LKW29_21775	COG3584	3D domain protein
LKW29_21790	COG1252	NADH dehydrogenase
LKW29_21805	COG3708	Transcriptional regulator
LKW29_21820	COG1683	Conserved Protein
LKW29_21840	COG0316	Belongs to the HesB IscA family
LKW29_21855	COG1252	NADH dehydrogenase
LKW29_21865	COG2274	protein secretion by the type I secretion system
LKW29_21870	COG0390	transport system, permease component
LKW29_21875	COG2824	Alkylphosphonate utilization operon protein PhnA
LKW29_21915	COG4837	Protein of unknown function (DUF1462)
LKW29_21920	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
LKW29_21930	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
LKW29_21935	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
LKW29_21945	COG2249	NAD(P)H dehydrogenase (quinone) activity
LKW29_21950	COG0647	UMP catabolic process
LKW29_21960	COG2445	Protein of unknown function DUF86
LKW29_21965	COG1494	fructose-1,6-bisphosphatase
LKW29_21980	COG4470	Protein conserved in bacteria
LKW29_21990	COG0789	Transcriptional regulator
LKW29_21995	COG4377	Putative membrane peptidase family (DUF2324)
LKW29_22020	COG0739	heme binding
LKW29_22030	COG3377	Domain of unknown function (DUF1805)
LKW29_22035	COG0737	Belongs to the 5'-nucleotidase family
LKW29_22040	COG1695	Transcriptional regulator
LKW29_22050	COG0719	Fe-S assembly protein
LKW29_22055	COG0822	iron-sulfur transferase activity
LKW29_22060	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
LKW29_22065	COG0719	Fe-S assembly protein
LKW29_22070	COG0396	ATPase activity
LKW29_22075	COG1464	Belongs to the NlpA lipoprotein family
LKW29_22085	COG2011	ABC-type metal ion transport system permease component
LKW29_22090	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LKW29_22100	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LKW29_22105	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
LKW29_22115	COG1393	Belongs to the ArsC family
LKW29_22160	COG0039	L-malate dehydrogenase activity
LKW29_22185	COG1309	transcriptional regulator
LKW29_22190	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LKW29_22195	COG1960	acyl-CoA dehydrogenase activity
LKW29_22200	COG0183	Belongs to the thiolase family
LKW29_22205	COG1250	3-hydroxyacyl-CoA dehydrogenase
LKW29_22205	COG1024	Enoyl-CoA hydratase
LKW29_22215	COG1686	Belongs to the peptidase S11 family
LKW29_22230	COG0011	TIGRFAM Protein of
LKW29_22235	COG0840	transmembrane signaling receptor activity
LKW29_22255	COG2814	Major facilitator Superfamily
LKW29_22260	COG0531	amino acid
LKW29_22270	COG0706	membrane insertase activity
LKW29_22280	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LKW29_22315	COG0586	Pfam SNARE associated Golgi protein
LKW29_22325	COG1376	ErfK ybiS ycfS ynhG family protein
LKW29_22330	COG0745	RESPONSE REGULATOR receiver
LKW29_22335	COG5002	protein histidine kinase activity
LKW29_22360	COG2151	metal-sulfur cluster biosynthetic enzyme
LKW29_22365	COG3227	Zinc metalloprotease (Elastase)
LKW29_22370	COG1741	Belongs to the pirin family
LKW29_22385	COG0475	glutathione-regulated potassium exporter activity
LKW29_22390	COG0490	domain, Protein
LKW29_22400	COG0783	Belongs to the Dps family
LKW29_22415	COG1611	Belongs to the LOG family
LKW29_22435	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LKW29_22440	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LKW29_22445	COG1115	amino acid carrier protein
LKW29_22450	COG1115	amino acid carrier protein
LKW29_22455	COG2910	NAD(P)H-binding
LKW29_22470	COG0656	L-ascorbic acid biosynthetic process
LKW29_22475	COG2814	Major facilitator Superfamily
LKW29_22480	COG1733	regulation of RNA biosynthetic process
LKW29_22490	COG1252	NADH dehydrogenase
LKW29_22495	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
LKW29_22500	COG0812	UDP-N-acetylmuramate dehydrogenase activity
LKW29_22510	COG0840	transmembrane signaling receptor activity
LKW29_22510	COG3290	protein histidine kinase activity
LKW29_22520	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LKW29_22525	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LKW29_22540	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LKW29_22595	COG0557	exoribonuclease II activity
LKW29_22600	COG1647	Serine aminopeptidase, S33
LKW29_22605	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
LKW29_22610	COG1346	cytolysis
LKW29_22710	COG4695	Portal protein
LKW29_22730	COG4974	Belongs to the 'phage' integrase family
LKW29_22745	COG0149	triose-phosphate isomerase activity
LKW29_22755	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
LKW29_22770	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
LKW29_22795	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LKW29_22810	COG2323	membrane
LKW29_22815	COG0740	serine-type endopeptidase activity
LKW29_22820	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
LKW29_22830	COG0391	Required for morphogenesis under gluconeogenic growth conditions
LKW29_22840	COG1051	belongs to the nudix hydrolase family
LKW29_22850	COG0492	ferredoxin-NADP+ reductase activity
LKW29_22855	COG0457	Tetratricopeptide repeat
LKW29_22860	COG0110	maltose O-acetyltransferase activity
LKW29_22880	COG1950	PFAM Membrane protein of
LKW29_22890	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
LKW29_22895	COG0556	nucleotide-excision repair
LKW29_22915	COG0789	Transcriptional regulator
LKW29_22940	COG2855	membrane
LKW29_22945	COG0583	DNA-binding transcription factor activity
LKW29_22955	COG0655	NAD(P)H dehydrogenase (quinone) activity
LKW29_22960	COG0488	(ABC) transporter
LKW29_22970	COG1132	(ABC) transporter
LKW29_22975	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LKW29_22980	COG3409	Peptidoglycan-binding domain 1 protein
LKW29_22980	COG0793	Belongs to the peptidase S41A family
LKW29_22985	COG2177	Part of the ABC transporter FtsEX involved in
LKW29_22990	COG2884	Cell division ATP-binding protein ftsE
LKW29_23005	COG0653	protein targeting
LKW29_23010	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
LKW29_23015	COG1278	Cold shock
LKW29_23020	COG1040	competence protein
LKW29_23025	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
LKW29_23030	COG0791	NLP P60 protein
LKW29_23030	COG1388	LysM domain
LKW29_23035	COG1733	regulation of RNA biosynthetic process
LKW29_23040	COG1307	EDD domain protein, DegV family
LKW29_23045	COG1739	Uncharacterized protein family UPF0029
LKW29_23050	COG1316	TRANSCRIPTIONal
LKW29_23055	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
LKW29_23060	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
LKW29_23065	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
LKW29_23075	COG3933	PFAM sigma-54 factor interaction domain-containing protein
LKW29_23075	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
LKW29_23090	COG3394	polysaccharide catabolic process
LKW29_23095	COG1486	melibiose metabolic process
LKW29_23100	COG1447	Phosphotransferase system cellobiose-specific component IIA
LKW29_23105	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
LKW29_23115	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
LKW29_23120	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
LKW29_23125	COG1447	Phosphotransferase system cellobiose-specific component IIA
LKW29_23135	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
LKW29_23140	COG1301	dicarboxylic acid transport
LKW29_23150	COG0346	lactoylglutathione lyase activity
LKW29_23155	COG1511	domain protein
LKW29_23160	COG0583	DNA-binding transcription factor activity
LKW29_23165	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
LKW29_23185	COG1294	oxidase, subunit
LKW29_23190	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
LKW29_23210	COG2389	metal-binding protein
LKW29_23220	COG1368	sulfuric ester hydrolase activity
LKW29_23235	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LKW29_23245	COG1215	transferase activity, transferring glycosyl groups
LKW29_23250	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
LKW29_23255	COG1388	LysM domain
LKW29_23255	COG3584	3D domain protein
LKW29_23280	COG4715	Zinc finger, swim domain protein
LKW29_23285	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
LKW29_23325	COG0577	efflux transmembrane transporter activity
LKW29_23330	COG1136	(ABC) transporter
LKW29_23365	COG5002	protein histidine kinase activity
LKW29_23370	COG0745	RESPONSE REGULATOR receiver
LKW29_23375	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
LKW29_23395	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
LKW29_23400	COG1134	teichoic acid transport
LKW29_23405	COG1682	transport, permease protein
LKW29_23410	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
LKW29_23455	COG1609	Transcriptional regulator
LKW29_23470	COG0739	heme binding
LKW29_23490	COG2385	sporulation resulting in formation of a cellular spore
LKW29_23505	COG4836	Membrane
LKW29_23510	COG1007	ATP synthesis coupled electron transport
LKW29_23515	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LKW29_23520	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
LKW29_23530	COG0839	Belongs to the complex I subunit 6 family
LKW29_23545	COG0649	NAD binding
LKW29_23550	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LKW29_23565	COG5001	Diguanylate cyclase
LKW29_23565	COG3300	MHYT domain
LKW29_23615	COG0356	it plays a direct role in the translocation of protons across the membrane
LKW29_23650	COG0698	ribose 5-phosphate isomerase
LKW29_23660	COG2190	(PTS) system
LKW29_23665	COG2259	Doxx family
LKW29_23670	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
LKW29_23685	COG0009	L-threonylcarbamoyladenylate synthase
LKW29_23700	COG2890	protein-(glutamine-N5) methyltransferase activity
LKW29_23720	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
LKW29_23725	COG1494	fructose-1,6-bisphosphatase
LKW29_23745	COG4821	SIS domain
LKW29_23755	COG3343	RNA polymerase activity
LKW29_23765	COG1960	acyl-CoA dehydrogenase activity
LKW29_23770	COG1960	acyl-CoA dehydrogenase activity
LKW29_23775	COG1250	3-hydroxyacyl-CoA dehydrogenase
LKW29_23780	COG0183	Belongs to the thiolase family
LKW29_23785	COG0247	lactate metabolic process
LKW29_23785	COG2181	nitrate reductase activity
LKW29_23790	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LKW29_23800	COG5001	Diguanylate cyclase
LKW29_23800	COG3300	MHYT domain
LKW29_23820	COG2197	response regulator
LKW29_23825	COG4585	Histidine kinase
LKW29_23830	COG0842	Transport permease protein
LKW29_23835	COG1131	(ABC) transporter
LKW29_23840	COG0024	Methionine aminopeptidase
LKW29_23850	COG2234	aminopeptidase activity
LKW29_23870	COG1595	DNA-templated transcription, initiation
LKW29_23875	COG0018	arginyl-trna synthetase
LKW29_23880	COG4506	Protein conserved in bacteria
LKW29_23885	COG1619	proteins homologs of microcin C7 resistance protein MccF
LKW29_23900	COG0010	Belongs to the arginase family
LKW29_23910	COG2814	Major facilitator Superfamily
LKW29_23915	COG0789	Transcriptional regulator
LKW29_23920	COG0584	glycerophosphoryl diester phosphodiesterase
LKW29_23925	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LKW29_23935	COG1994	Peptidase M50
LKW29_23945	COG1078	dGTPase activity
LKW29_23950	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LKW29_23955	COG1120	ATPase activity
LKW29_23960	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LKW29_23965	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LKW29_23985	COG0095	Lipoate-protein ligase
LKW29_23990	COG0280	phosphate acetyltransferase
LKW29_24005	COG3773	Cell wall hydrolase
LKW29_24015	COG2363	Small membrane protein
LKW29_24025	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
LKW29_24030	COG2233	PERMEase
LKW29_24035	COG0561	phosphatase activity
LKW29_24040	COG2814	Major facilitator Superfamily
LKW29_24050	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
LKW29_24055	COG1131	(ABC) transporter
LKW29_24060	COG2755	lipolytic protein G-D-S-L family
LKW29_24065	COG1609	Transcriptional regulator
LKW29_24075	COG0460	homoserine dehydrogenase
LKW29_24085	COG2873	o-acetylhomoserine
LKW29_24095	COG1011	Hydrolase
LKW29_24100	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
LKW29_24110	COG2197	response regulator
LKW29_24120	COG0351	phosphomethylpyrimidine kinase
LKW29_24125	COG3706	GGDEF domain
LKW29_24130	COG2879	small protein
LKW29_24135	COG1966	Carbon starvation protein
LKW29_24140	COG3279	Response regulator of the LytR AlgR family
LKW29_24145	COG0477	Major facilitator Superfamily
LKW29_24170	COG0840	transmembrane signaling receptor activity
LKW29_24180	COG1607	acyl-coa hydrolase
LKW29_24195	COG0488	(ABC) transporter
LKW29_24215	COG0463	Glycosyl transferase, family 2
LKW29_24220	COG1309	transcriptional regulator
LKW29_24225	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LKW29_24230	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LKW29_24230	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LKW29_24235	COG0628	permease
LKW29_24250	COG3279	Response regulator of the LytR AlgR family
LKW29_24255	COG3275	phosphorelay sensor kinase activity
LKW29_24260	COG2814	Major facilitator Superfamily
LKW29_24265	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
LKW29_24270	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
LKW29_24275	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
LKW29_24295	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
LKW29_24300	COG1272	protein, Hemolysin III
LKW29_24325	COG1164	Oligoendopeptidase f
LKW29_24345	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LKW29_24350	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
LKW29_24355	COG4853	Protein conserved in bacteria
LKW29_24360	COG4863	YycH protein
LKW29_24365	COG5002	protein histidine kinase activity
LKW29_24370	COG0745	RESPONSE REGULATOR receiver
LKW29_24400	COG0305	Participates in initiation and elongation during chromosome replication
LKW29_24410	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
LKW29_24415	COG4241	membrane
LKW29_24425	COG0629	single-stranded DNA binding
LKW29_24435	COG0012	GTP binding
LKW29_24440	COG4481	Protein conserved in bacteria
LKW29_24445	COG0668	transmembrane transport
LKW29_24455	COG1475	DNA binding
LKW29_24460	COG1192	Involved in chromosome partitioning
LKW29_24485	COG1847	R3H domain protein
LKW29_24490	COG0706	membrane insertase activity
LKW29_24500	COG0230	Belongs to the bacterial ribosomal protein bL34 family
LKW29_24510	COG0592	DNA-directed DNA polymerase activity
LKW29_24515	COG2501	S4 domain
LKW29_24530	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LKW29_24565	COG0516	GMP reductase activity
LKW29_24565	COG0517	IMP dehydrogenase activity
LKW29_24570	COG1686	Belongs to the peptidase S11 family
LKW29_24600	COG1428	Deoxynucleoside kinase
LKW29_24605	COG1428	Deoxynucleoside kinase
LKW29_24610	COG1335	isochorismatase
LKW29_24615	COG0590	tRNA wobble adenosine to inosine editing
LKW29_24625	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
LKW29_24680	COG1982	Orn Lys Arg decarboxylase major
LKW29_24690	COG0470	DNA polymerase III
LKW29_24695	COG1774	PSP1 C-terminal conserved region
LKW29_24705	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
LKW29_24715	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
LKW29_24720	COG2002	toxin-antitoxin pair type II binding
LKW29_24725	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LKW29_24725	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LKW29_24730	COG0084	hydrolase, TatD family'
LKW29_24735	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
LKW29_24750	COG4466	Protein conserved in bacteria
LKW29_24765	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
LKW29_24770	COG0251	oxidation-reduction process
LKW29_24805	COG2002	toxin-antitoxin pair type II binding
LKW29_24815	COG3956	TIGRFAM MazG family protein
LKW29_24820	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
LKW29_24840	COG1098	S1 RNA binding domain
LKW29_24855	COG2208	phosphoserine phosphatase activity
LKW29_24865	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
LKW29_24870	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
LKW29_24885	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
LKW29_24890	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
LKW29_24895	COG0512	Glutamine amidotransferase of anthranilate synthase
LKW29_24900	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
LKW29_24905	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
LKW29_24910	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
LKW29_24915	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
LKW29_24920	COG1396	sequence-specific DNA binding
LKW29_24925	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LKW29_24955	COG3880	PFAM UvrB UvrC protein
LKW29_24965	COG0542	response to heat
LKW29_24970	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
LKW29_24980	COG4956	integral membrane protein (PIN domain superfamily)
LKW29_25000	COG1045	serine acetyltransferase
LKW29_25015	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LKW29_25020	COG3688	RNA-binding protein containing a PIN domain
LKW29_25035	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
LKW29_25040	COG0250	Participates in transcription elongation, termination and antitermination
LKW29_25045	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
LKW29_25065	COG2813	Specifically methylates the guanine in position
LKW29_25075	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LKW29_25080	COG1358	cellular component organization or biogenesis
LKW29_25150	COG0255	Belongs to the universal ribosomal protein uL29 family
LKW29_25210	COG0201	protein transport
LKW29_25220	COG0024	Methionine aminopeptidase
LKW29_25230	COG0257	Belongs to the bacterial ribosomal protein bL36 family
LKW29_25265	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LKW29_25290	COG0860	N-Acetylmuramoyl-L-alanine amidase
LKW29_25295	COG0489	protein tyrosine kinase activity
LKW29_25305	COG2194	sulfuric ester hydrolase activity
LKW29_25310	COG0726	polysaccharide deacetylase
LKW29_25390	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
LKW29_25395	COG4856	YbbR-like protein
LKW29_25410	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
LKW29_25415	COG0596	Alpha beta hydrolase
LKW29_25435	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
LKW29_25440	COG0823	Involved in the tonB-independent uptake of proteins
LKW29_25440	COG1506	peptidase
LKW29_25440	COG4946	Tricorn protease homolog
LKW29_25475	COG2011	ABC-type metal ion transport system permease component
LKW29_25480	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LKW29_25485	COG1464	Belongs to the NlpA lipoprotein family
LKW29_25490	COG0604	alcohol dehydrogenase
LKW29_25505	COG2271	Major facilitator Superfamily
LKW29_25515	COG2814	Major facilitator Superfamily
LKW29_25530	COG0601	transmembrane transport
LKW29_25535	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LKW29_25540	COG0444	Belongs to the ABC transporter superfamily
LKW29_25545	COG4608	Belongs to the ABC transporter superfamily
LKW29_25550	COG4166	transmembrane transport
LKW29_25560	COG2207	Transcriptional regulator
LKW29_25575	COG4166	transmembrane transport
LKW29_25580	COG4166	transmembrane transport
LKW29_25585	COG0656	L-ascorbic acid biosynthetic process
LKW29_25605	COG4149	molybdate abc transporter
LKW29_25610	COG0725	ABC transporter, periplasmic molybdate-binding protein
LKW29_25615	COG1910	domain protein
LKW29_25625	COG0583	DNA-binding transcription factor activity
LKW29_25630	COG0697	spore germination
LKW29_25645	COG0204	Acyl-transferase
LKW29_25665	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LKW29_25675	COG0084	hydrolase, TatD family'
LKW29_25680	COG5298	Protein conserved in bacteria
LKW29_25705	COG0488	(ABC) transporter
LKW29_25720	COG0747	negative chemotaxis
LKW29_25725	COG0601	transmembrane transport
LKW29_25730	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LKW29_25735	COG0444	Belongs to the ABC transporter superfamily
LKW29_25740	COG4608	Belongs to the ABC transporter superfamily
LKW29_25770	COG3185	4-Hydroxyphenylpyruvate dioxygenase
LKW29_25775	COG0179	Fumarylacetoacetate (FAA) hydrolase
LKW29_25785	COG2814	Major facilitator Superfamily
LKW29_25795	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
LKW29_25805	COG4294	response to UV
LKW29_25810	COG0457	Tetratricopeptide repeat
LKW29_25810	COG0705	Rhomboid family
LKW29_25820	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
LKW29_25825	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LKW29_25830	COG0864	Transcriptional regulator
LKW29_25835	COG2337	Toxic component of a toxin-antitoxin (TA) module
LKW29_25840	COG2183	response to ionizing radiation
LKW29_25935	COG0802	atpase or kinase
LKW29_25940	COG1214	PFAM Peptidase M22, glycoprotease
LKW29_25945	COG0456	acetyltransferase
LKW29_25955	COG0488	(ABC) transporter
LKW29_25970	COG1266	CAAX protease self-immunity
LKW29_25990	COG2252	PERMEase
LKW29_26000	COG5002	protein histidine kinase activity
LKW29_26025	COG1968	undecaprenyl-diphosphatase activity
LKW29_26040	COG2205	protein histidine kinase activity
LKW29_26045	COG0745	RESPONSE REGULATOR receiver
LKW29_26070	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
LKW29_26075	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
LKW29_26080	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
LKW29_26090	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
LKW29_26105	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
LKW29_26115	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
LKW29_26125	COG0151	Belongs to the GarS family
LKW29_26150	COG0210	DNA helicase
LKW29_26160	COG4851	CamS sex pheromone cAM373 precursor
LKW29_26180	COG1335	isochorismatase
LKW29_26185	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LKW29_26190	COG2011	ABC-type metal ion transport system permease component
LKW29_26195	COG1464	Belongs to the NlpA lipoprotein family
LKW29_26220	COG1846	Transcriptional regulator
LKW29_26245	COG1597	lipid kinase activity
LKW29_26250	COG0546	phosphoglycolate phosphatase activity
LKW29_26255	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
LKW29_26265	COG1012	belongs to the aldehyde dehydrogenase family
LKW29_26270	COG2076	Multidrug Resistance protein
LKW29_26275	COG2309	aminopeptidase activity
LKW29_26290	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LKW29_26295	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LKW29_26300	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LKW29_26310	COG4807	Protein conserved in bacteria
LKW29_26335	COG1757	Na H antiporter
LKW29_26340	COG1473	amidohydrolase
LKW29_26355	COG0450	alkyl hydroperoxide reductase
LKW29_26375	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LKW29_26380	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LKW29_26385	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LKW29_26400	COG0166	Belongs to the GPI family
LKW29_26435	COG5002	protein histidine kinase activity
LKW29_26455	COG3541	Predicted nucleotidyltransferase
LKW29_26460	COG2814	Major facilitator Superfamily
LKW29_26475	COG0765	amino acid transport
LKW29_26480	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LKW29_26490	COG0840	transmembrane signaling receptor activity
LKW29_26495	COG0840	transmembrane signaling receptor activity
LKW29_26500	COG0366	Alpha amylase catalytic
LKW29_26505	COG2190	(PTS) system
LKW29_26505	COG1263	PTS System
LKW29_26505	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LKW29_26535	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
LKW29_26550	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LKW29_26560	COG1116	anion transmembrane transporter activity
LKW29_26565	COG0488	(ABC) transporter
LKW29_26610	COG2270	Major facilitator Superfamily
LKW29_26625	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
LKW29_26640	COG2310	stress, protein
LKW29_26645	COG2310	stress, protein
LKW29_26650	COG2310	stress, protein
LKW29_26655	COG0861	Integral membrane protein TerC family
LKW29_26665	COG3853	Toxic anion resistance protein (TelA)
LKW29_26680	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
LKW29_26690	COG1295	ribonuclease BN
LKW29_26695	COG2217	Heavy metal translocating P-type atpase
LKW29_26700	COG0697	spore germination
LKW29_26720	COG0586	Pfam SNARE associated Golgi protein
LKW29_26735	COG3871	stress protein (general stress protein 26)
LKW29_26740	COG0387	Pfam Sodium calcium exchanger
LKW29_26750	COG0535	radical SAM domain protein
LKW29_26775	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LKW29_26780	COG0582	viral genome integration into host DNA
LKW29_26790	COG1396	sequence-specific DNA binding
LKW29_26805	COG1396	sequence-specific DNA binding
LKW29_26840	COG1484	DNA-dependent DNA replication
LKW29_27075	COG0101	tRNA pseudouridine synthase activity
LKW29_27085	COG3829	transcription factor binding
LKW29_27095	COG0833	amino acid
LKW29_27100	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LKW29_27130	COG1263	PTS System
LKW29_27130	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LKW29_27135	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
LKW29_27150	COG0463	Glycosyl transferase, family 2
LKW29_27160	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
LKW29_27160	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LKW29_27175	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LKW29_27195	COG1228	amidohydrolase
LKW29_27200	COG1090	epimerase
LKW29_27230	COG1988	membrane-bound metal-dependent
LKW29_27235	COG1194	a g-specific adenine glycosylase
LKW29_27260	COG1132	(ABC) transporter
LKW29_27265	COG4129	membrane
LKW29_27270	COG0067	glutamate synthase
LKW29_27270	COG0069	glutamate synthase activity
LKW29_27270	COG0070	glutamate synthase
LKW29_27280	COG4555	ABC transporter
LKW29_27300	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
LKW29_27305	COG0735	belongs to the Fur family
LKW29_27325	COG4962	Type ii secretion system protein e
LKW29_27465	COG2311	Membrane
LKW29_27490	COG4196	transglutaminase domain protein
LKW29_27495	COG0671	phosphoesterase, PA-phosphatase related
LKW29_27510	COG1215	transferase activity, transferring glycosyl groups
LKW29_27515	COG1210	Utp--glucose-1-phosphate uridylyltransferase
LKW29_27520	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
LKW29_27685	COG2002	toxin-antitoxin pair type II binding
LKW29_27695	COG4974	Belongs to the 'phage' integrase family
LKW29_27750	COG3443	Belongs to the bacterial solute-binding protein 9 family
LKW29_27760	COG4974	Belongs to the 'phage' integrase family
LKW29_27785	COG0457	Tetratricopeptide repeat
LKW29_27890	COG3344	reverse transcriptase
LKW29_27970	COG3344	reverse transcriptase
LKW29_28200	COG1192	Involved in chromosome partitioning
LKW29_28245	COG1683	Conserved Protein
LKW29_28250	COG1309	transcriptional regulator
LKW29_28325	COG0681	Belongs to the peptidase S26 family
LKW29_28360	COG1280	lysine exporter protein (LysE YggA)
LKW29_28405	COG4166	transmembrane transport
LKW29_28415	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII