locus-tag class description LIS83_00005 PF00308 Bacterial dnaA protein LIS83_00005 PF08299 Bacterial dnaA protein helix-turn-helix LIS83_00005 PF11638 DnaA N-terminal domain LIS83_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain LIS83_00010 PF02767 DNA polymerase III beta subunit, central domain LIS83_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain LIS83_00020 PF02463 RecF/RecN/SMC N terminal domain LIS83_00025 PF00204 DNA gyrase B LIS83_00025 PF00986 DNA gyrase B subunit, carboxyl terminus LIS83_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_00025 PF01751 Toprim domain LIS83_00030 PF00521 DNA gyrase/topoisomerase IV, subunit A LIS83_00030 PF03989 DNA gyrase C-terminal domain, beta-propeller LIS83_00060 PF14175 YaaC-like Protein LIS83_00065 PF00571 CBS domain LIS83_00065 PF00478 IMP dehydrogenase / GMP reductase domain LIS83_00070 PF07943 Penicillin-binding protein 5, C-terminal domain LIS83_00070 PF00768 D-alanyl-D-alanine carboxypeptidase LIS83_00075 PF01680 SOR/SNZ family LIS83_00080 PF01174 SNO glutamine amidotransferase family LIS83_00085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LIS83_00085 PF02403 Seryl-tRNA synthetase N-terminal domain LIS83_00100 PF01712 Deoxynucleoside kinase LIS83_00105 PF01712 Deoxynucleoside kinase LIS83_00110 PF00857 Isochorismatase family LIS83_00115 PF14437 MafB19-like deaminase LIS83_00125 PF12169 DNA polymerase III subunits gamma and tau domain III LIS83_00130 PF02575 YbaB/EbfC DNA-binding family LIS83_00135 PF13662 Toprim domain LIS83_00135 PF02132 RecR protein LIS83_00140 PF10704 Protein of unknown function (DUF2508) LIS83_00145 PF07441 SigmaK-factor processing regulatory protein BofA LIS83_00180 PF01276 Orn/Lys/Arg decarboxylase, major domain LIS83_00180 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LIS83_00185 PF02223 Thymidylate kinase LIS83_00190 PF09115 DNA polymerase III, delta subunit, C terminal LIS83_00195 PF04468 PSP1 C-terminal conserved region LIS83_00200 PF06156 Initiation control protein YabA LIS83_00205 PF05175 Methyltransferase small domain LIS83_00210 PF01541 GIY-YIG catalytic domain LIS83_00215 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LIS83_00220 PF18277 AbrB C-terminal domain LIS83_00220 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LIS83_00225 PF08264 Anticodon-binding domain of tRNA LIS83_00225 PF09334 tRNA synthetases class I (M) LIS83_00225 PF01588 Putative tRNA binding domain LIS83_00230 PF01026 TatD related DNase LIS83_00235 PF13662 Toprim domain LIS83_00235 PF13331 Domain of unknown function (DUF4093) LIS83_00240 PF00398 Ribosomal RNA adenine dimethylase LIS83_00245 PF05582 YabG peptidase U57 LIS83_00250 PF06257 Biofilm formation stimulator VEG LIS83_00255 PF00269 Small, acid-soluble spore proteins, alpha/beta type LIS83_00260 PF00288 GHMP kinases N terminal domain LIS83_00260 PF08544 GHMP kinases C terminal LIS83_00265 PF09182 Bacterial purine repressor, N-terminal LIS83_00265 PF00156 Phosphoribosyl transferase domain LIS83_00270 PF01042 Endoribonuclease L-PSP LIS83_00275 PF04026 SpoVG LIS83_00280 PF00132 Bacterial transferase hexapeptide (six repeats) LIS83_00280 PF00483 Nucleotidyl transferase LIS83_00285 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LIS83_00285 PF14572 Phosphoribosyl synthetase-associated domain LIS83_00290 PF01195 Peptidyl-tRNA hydrolase LIS83_00300 PF02559 CarD-like/TRCF domain LIS83_00300 PF00270 DEAD/DEAH box helicase LIS83_00300 PF00271 Helicase conserved C-terminal domain LIS83_00300 PF03461 TRCF domain LIS83_00300 PF17757 UvrB interaction domain LIS83_00305 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LIS83_00305 PF15714 Stage V sporulation protein T C-terminal, transcription factor LIS83_00310 PF01943 Polysaccharide biosynthesis protein LIS83_00310 PF14667 Polysaccharide biosynthesis C-terminal domain LIS83_00315 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LIS83_00315 PF03819 MazG nucleotide pyrophosphohydrolase domain LIS83_00320 PF01479 S4 domain LIS83_00325 PF07873 YabP family LIS83_00330 PF09578 Spore cortex protein YabQ (Spore_YabQ) LIS83_00340 PF00575 S1 RNA binding domain LIS83_00355 PF07228 Stage II sporulation protein E (SpoIIE) LIS83_00360 PF11734 TilS substrate C-terminal domain LIS83_00360 PF09179 TilS substrate binding domain LIS83_00360 PF01171 PP-loop family LIS83_00365 PF00156 Phosphoribosyl transferase domain LIS83_00370 PF06480 FtsH Extracellular LIS83_00370 PF17862 AAA+ lid domain LIS83_00370 PF00004 ATPase family associated with various cellular activities (AAA) LIS83_00370 PF01434 Peptidase family M41 LIS83_00375 PF03309 Type III pantothenate kinase LIS83_00380 PF01430 Hsp33 protein LIS83_00385 PF00291 Pyridoxal-phosphate dependent enzyme LIS83_00390 PF00425 chorismate binding enzyme LIS83_00390 PF04715 Anthranilate synthase component I, N terminal region LIS83_00395 PF00117 Glutamine amidotransferase class-I LIS83_00400 PF01063 Amino-transferase class IV LIS83_00405 PF00809 Pterin binding enzyme LIS83_00410 PF02152 Dihydroneopterin aldolase LIS83_00415 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LIS83_00420 PF01381 Helix-turn-helix LIS83_00425 PF01207 Dihydrouridine synthase (Dus) LIS83_00430 PF01336 OB-fold nucleic acid binding domain LIS83_00430 PF00152 tRNA synthetases class II (D, K and N) LIS83_00510 PF17727 CtsR C-terminal dimerization domain LIS83_00510 PF05848 CtsR N-terminal HTH domain LIS83_00515 PF02151 UvrB/uvrC motif LIS83_00520 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain LIS83_00525 PF07724 AAA domain (Cdc48 subfamily) LIS83_00525 PF00004 ATPase family associated with various cellular activities (AAA) LIS83_00525 PF02861 Clp amino terminal domain, pathogenicity island component LIS83_00525 PF17871 AAA lid domain LIS83_00525 PF10431 C-terminal, D2-small domain, of ClpB protein LIS83_00530 PF18073 Rubredoxin metal binding domain LIS83_00535 PF02457 DisA bacterial checkpoint controller nucleotide-binding LIS83_00535 PF10635 DisA bacterial checkpoint controller linker region LIS83_00545 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LIS83_00550 PF02542 YgbB family LIS83_00555 PF00749 tRNA synthetases class I (E and Q), catalytic domain LIS83_00560 PF00132 Bacterial transferase hexapeptide (six repeats) LIS83_00560 PF06426 Serine acetyltransferase, N-terminal LIS83_00565 PF01406 tRNA synthetases class I (C) catalytic domain LIS83_00565 PF09190 DALR domain LIS83_00570 PF00636 Ribonuclease III domain LIS83_00575 PF00588 SpoU rRNA Methylase family LIS83_00575 PF08032 RNA 2'-O ribose methyltransferase substrate binding LIS83_00580 PF05991 YacP-like NYN domain LIS83_00585 PF08281 Sigma-70, region 4 LIS83_00585 PF04542 Sigma-70 region 2 LIS83_00590 PF00471 Ribosomal protein L33 LIS83_00595 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LIS83_00600 PF02357 Transcription termination factor nusG LIS83_00600 PF00467 KOW motif LIS83_00605 PF03946 Ribosomal protein L11, N-terminal domain LIS83_00605 PF00298 Ribosomal protein L11, RNA binding domain LIS83_00610 PF00687 Ribosomal protein L1p/L10e family LIS83_00615 PF00466 Ribosomal protein L10 LIS83_00620 PF16320 Ribosomal protein L7/L12 dimerisation domain LIS83_00620 PF00542 Ribosomal protein L7/L12 C-terminal domain LIS83_00625 PF05175 Methyltransferase small domain LIS83_00630 PF04560 RNA polymerase Rpb2, domain 7 LIS83_00630 PF00562 RNA polymerase Rpb2, domain 6 LIS83_00630 PF10385 RNA polymerase beta subunit external 1 domain LIS83_00630 PF04561 RNA polymerase Rpb2, domain 2 LIS83_00630 PF04563 RNA polymerase beta subunit LIS83_00630 PF04565 RNA polymerase Rpb2, domain 3 LIS83_00635 PF04998 RNA polymerase Rpb1, domain 5 LIS83_00635 PF05000 RNA polymerase Rpb1, domain 4 LIS83_00635 PF04983 RNA polymerase Rpb1, domain 3 LIS83_00635 PF00623 RNA polymerase Rpb1, domain 2 LIS83_00635 PF04997 RNA polymerase Rpb1, domain 1 LIS83_00640 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family LIS83_00645 PF00164 Ribosomal protein S12/S23 LIS83_00650 PF00177 Ribosomal protein S7p/S5e LIS83_00655 PF00009 Elongation factor Tu GTP binding domain LIS83_00655 PF03764 Elongation factor G, domain IV LIS83_00655 PF14492 Elongation Factor G, domain II LIS83_00655 PF00679 Elongation factor G C-terminus LIS83_00655 PF03144 Elongation factor Tu domain 2 LIS83_00660 PF03143 Elongation factor Tu C-terminal domain LIS83_00660 PF03144 Elongation factor Tu domain 2 LIS83_00660 PF00009 Elongation factor Tu GTP binding domain LIS83_00665 PF00338 Ribosomal protein S10p/S20e LIS83_00670 PF00297 Ribosomal protein L3 LIS83_00675 PF00573 Ribosomal protein L4/L1 family LIS83_00680 PF00276 Ribosomal protein L23 LIS83_00685 PF03947 Ribosomal Proteins L2, C-terminal domain LIS83_00685 PF00181 Ribosomal Proteins L2, RNA binding domain LIS83_00690 PF00203 Ribosomal protein S19 LIS83_00695 PF00237 Ribosomal protein L22p/L17e LIS83_00700 PF07650 KH domain LIS83_00700 PF00189 Ribosomal protein S3, C-terminal domain LIS83_00705 PF00252 Ribosomal protein L16p/L10e LIS83_00710 PF00831 Ribosomal L29 protein LIS83_00715 PF00366 Ribosomal protein S17 LIS83_00720 PF00238 Ribosomal protein L14p/L23e LIS83_00725 PF00467 KOW motif LIS83_00725 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LIS83_00730 PF00281 Ribosomal protein L5 LIS83_00730 PF00673 ribosomal L5P family C-terminus LIS83_00735 PF00253 Ribosomal protein S14p/S29e LIS83_00740 PF00410 Ribosomal protein S8 LIS83_00745 PF00347 Ribosomal protein L6 LIS83_00750 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LIS83_00755 PF00333 Ribosomal protein S5, N-terminal domain LIS83_00755 PF03719 Ribosomal protein S5, C-terminal domain LIS83_00760 PF00327 Ribosomal protein L30p/L7e LIS83_00765 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LIS83_00770 PF00344 SecY translocase LIS83_00775 PF05191 Adenylate kinase, active site lid LIS83_00780 PF00557 Metallopeptidase family M24 LIS83_00785 PF01176 Translation initiation factor 1A / IF-1 LIS83_00790 PF00444 Ribosomal protein L36 LIS83_00795 PF00416 Ribosomal protein S13/S18 LIS83_00800 PF00411 Ribosomal protein S11 LIS83_00805 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LIS83_00805 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LIS83_00805 PF01000 RNA polymerase Rpb3/RpoA insert domain LIS83_00810 PF01196 Ribosomal protein L17 LIS83_00815 PF00005 ABC transporter LIS83_00820 PF00005 ABC transporter LIS83_00825 PF02361 Cobalt transport protein LIS83_00830 PF01416 tRNA pseudouridine synthase LIS83_00835 PF00572 Ribosomal protein L13 LIS83_00840 PF00380 Ribosomal protein S9/S16 LIS83_00850 PF01520 N-acetylmuramoyl-L-alanine amidase LIS83_00855 PF10609 NUBPL iron-transfer P-loop NTPase LIS83_00860 PF17898 Spore germination GerD central core domain LIS83_00865 PF14089 KinB-signalling pathway activation in sporulation LIS83_00870 PF01522 Polysaccharide deacetylase LIS83_00940 PF02595 Glycerate kinase family LIS83_00945 PF00491 Arginase family LIS83_00950 PF02457 DisA bacterial checkpoint controller nucleotide-binding LIS83_00955 PF07949 YbbR-like protein LIS83_00960 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LIS83_00960 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LIS83_00960 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LIS83_00960 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LIS83_00970 PF01380 SIS domain LIS83_00985 PF00665 Integrase core domain LIS83_00990 PF11426 Tn7 transposition regulator TnsC LIS83_00990 PF13401 AAA domain LIS83_00995 PF15978 Tn7-like transposition protein D LIS83_00995 PF06527 TniQ LIS83_01005 PF02463 RecF/RecN/SMC N terminal domain LIS83_01010 PF00580 UvrD/REP helicase N-terminal domain LIS83_01010 PF13361 UvrD-like helicase C-terminal domain LIS83_01015 PF02463 RecF/RecN/SMC N terminal domain LIS83_01035 PF07729 FCD domain LIS83_01035 PF00392 Bacterial regulatory proteins, gntR family LIS83_01040 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LIS83_01040 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LIS83_01045 PF02447 GntP family permease LIS83_01050 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LIS83_01050 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LIS83_01090 PF00528 Binding-protein-dependent transport system inner membrane component LIS83_01095 PF00005 ABC transporter LIS83_01095 PF09383 NIL domain LIS83_01100 PF03180 NLPA lipoprotein LIS83_01105 PF00107 Zinc-binding dehydrogenase LIS83_01105 PF08240 Alcohol dehydrogenase GroES-like domain LIS83_01115 PF01565 FAD binding domain LIS83_01120 PF07690 Major Facilitator Superfamily LIS83_01130 PF07690 Major Facilitator Superfamily LIS83_01145 PF00528 Binding-protein-dependent transport system inner membrane component LIS83_01150 PF12911 N-terminal TM domain of oligopeptide transport permease C LIS83_01150 PF00528 Binding-protein-dependent transport system inner membrane component LIS83_01155 PF00005 ABC transporter LIS83_01155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LIS83_01160 PF00005 ABC transporter LIS83_01160 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LIS83_01165 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LIS83_01175 PF12833 Helix-turn-helix domain LIS83_01190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LIS83_01195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LIS83_01200 PF00248 Aldo/keto reductase family LIS83_01205 PF03807 NADP oxidoreductase coenzyme F420-dependent LIS83_01205 PF14748 Pyrroline-5-carboxylate reductase dimerisation LIS83_01210 PF04973 Nicotinamide mononucleotide transporter LIS83_01215 PF06800 Sugar transport protein LIS83_01220 PF00528 Binding-protein-dependent transport system inner membrane component LIS83_01230 PF12727 PBP superfamily domain LIS83_01230 PF12728 Helix-turn-helix domain LIS83_01240 PF03466 LysR substrate binding domain LIS83_01240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIS83_01245 PF00892 EamA-like transporter family LIS83_01250 PF14142 YrzO-like protein LIS83_01260 PF01553 Acyltransferase LIS83_01270 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LIS83_01270 PF00356 Bacterial regulatory proteins, lacI family LIS83_01280 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LIS83_01280 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LIS83_01290 PF01026 TatD related DNase LIS83_01300 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) LIS83_01325 PF00005 ABC transporter LIS83_01325 PF16326 ABC transporter C-terminal domain LIS83_01325 PF12848 ABC transporter LIS83_01340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LIS83_01345 PF00528 Binding-protein-dependent transport system inner membrane component LIS83_01350 PF00528 Binding-protein-dependent transport system inner membrane component LIS83_01350 PF12911 N-terminal TM domain of oligopeptide transport permease C LIS83_01355 PF00005 ABC transporter LIS83_01355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LIS83_01360 PF00005 ABC transporter LIS83_01360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LIS83_01395 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LIS83_01400 PF01557 Fumarylacetoacetate (FAA) hydrolase family LIS83_01410 PF07690 Major Facilitator Superfamily LIS83_01415 PF07478 D-ala D-ala ligase C-terminus LIS83_01415 PF01820 D-ala D-ala ligase N-terminus LIS83_01420 PF01225 Mur ligase family, catalytic domain LIS83_01420 PF02875 Mur ligase family, glutamate ligase domain LIS83_01420 PF08245 Mur ligase middle domain LIS83_01425 PF00270 DEAD/DEAH box helicase LIS83_01425 PF00271 Helicase conserved C-terminal domain LIS83_01430 PF03851 UV-endonuclease UvdE LIS83_01435 PF01694 Rhomboid family LIS83_01440 PF01648 4'-phosphopantetheinyl transferase superfamily LIS83_01450 PF00842 Alanine racemase, C-terminal domain LIS83_01450 PF01168 Alanine racemase, N-terminal domain LIS83_01455 PF01402 Ribbon-helix-helix protein, copG family LIS83_01460 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system LIS83_01465 PF17674 HHH domain LIS83_01465 PF00575 S1 RNA binding domain LIS83_01465 PF09371 Tex-like protein N-terminal domain LIS83_01465 PF16921 Tex protein YqgF-like domain LIS83_01475 PF10263 SprT-like family LIS83_01475 PF17283 SprT-like zinc ribbon domain LIS83_01560 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LIS83_01565 PF00814 Glycoprotease family LIS83_01570 PF00583 Acetyltransferase (GNAT) family LIS83_01575 PF00814 Glycoprotease family LIS83_01580 PF12848 ABC transporter LIS83_01580 PF00005 ABC transporter LIS83_01580 PF16326 ABC transporter C-terminal domain LIS83_01585 PF02629 CoA binding domain LIS83_01585 PF06971 Putative DNA-binding protein N-terminus LIS83_01595 PF02517 CPBP intramembrane metalloprotease LIS83_01600 PF00166 Chaperonin 10 Kd subunit LIS83_01605 PF00118 TCP-1/cpn60 chaperonin family LIS83_01610 PF14449 Pre-toxin TG LIS83_01610 PF04740 LXG domain of WXG superfamily LIS83_01620 PF02540 NAD synthase LIS83_01620 PF00958 GMP synthase C terminal domain LIS83_01620 PF00117 Glutamine amidotransferase class-I LIS83_01625 PF00860 Permease family LIS83_01630 PF00072 Response regulator receiver domain LIS83_01630 PF00486 Transcriptional regulatory protein, C terminal LIS83_01635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_01635 PF00512 His Kinase A (phospho-acceptor) domain LIS83_01635 PF00989 PAS fold LIS83_01635 PF16736 Single Cache-like LIS83_01660 PF01323 DSBA-like thioredoxin domain LIS83_01720 PF02673 Bacitracin resistance protein BacA LIS83_01730 PF00005 ABC transporter LIS83_01735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_01735 PF00512 His Kinase A (phospho-acceptor) domain LIS83_01740 PF00072 Response regulator receiver domain LIS83_01740 PF00486 Transcriptional regulatory protein, C terminal LIS83_01760 PF00892 EamA-like transporter family LIS83_01790 PF00731 AIR carboxylase LIS83_01795 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LIS83_01795 PF02222 ATP-grasp domain LIS83_01800 PF00206 Lyase LIS83_01800 PF10397 Adenylosuccinate lyase C-terminus LIS83_01805 PF01259 SAICAR synthetase LIS83_01810 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase LIS83_01820 PF00586 AIR synthase related protein, N-terminal domain LIS83_01820 PF02769 AIR synthase related protein, C-terminal domain LIS83_01820 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LIS83_01825 PF00156 Phosphoribosyl transferase domain LIS83_01830 PF00586 AIR synthase related protein, N-terminal domain LIS83_01830 PF02769 AIR synthase related protein, C-terminal domain LIS83_01835 PF00551 Formyl transferase LIS83_01840 PF02142 MGS-like domain LIS83_01840 PF01808 AICARFT/IMPCHase bienzyme LIS83_01845 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LIS83_01845 PF02843 Phosphoribosylglycinamide synthetase, C domain LIS83_01845 PF02844 Phosphoribosylglycinamide synthetase, N domain LIS83_01865 PF01884 PcrB family LIS83_01870 PF00580 UvrD/REP helicase N-terminal domain LIS83_01870 PF13361 UvrD-like helicase C-terminal domain LIS83_01875 PF00533 BRCA1 C Terminus (BRCT) domain LIS83_01875 PF01653 NAD-dependent DNA ligase adenylation domain LIS83_01875 PF03120 NAD-dependent DNA ligase OB-fold domain LIS83_01875 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LIS83_01875 PF12826 Helix-hairpin-helix motif LIS83_01880 PF07537 CamS sex pheromone cAM373 precursor LIS83_01885 PF01925 Sulfite exporter TauE/SafE LIS83_01890 PF00171 Aldehyde dehydrogenase family LIS83_01895 PF00857 Isochorismatase family LIS83_01900 PF00005 ABC transporter LIS83_01900 PF09383 NIL domain LIS83_01905 PF00528 Binding-protein-dependent transport system inner membrane component LIS83_01910 PF03180 NLPA lipoprotein LIS83_01925 PF17886 HSP20-like domain found in ArsA LIS83_01925 PF02374 Anion-transporting ATPase LIS83_01930 PF01047 MarR family LIS83_01935 PF05360 yiaA/B two helix domain LIS83_01940 PF02686 Glu-tRNAGln amidotransferase C subunit LIS83_01945 PF01425 Amidase LIS83_01950 PF02637 GatB domain LIS83_01950 PF02934 GatB/GatE catalytic domain LIS83_01955 PF00781 Diacylglycerol kinase catalytic domain LIS83_01960 PF13419 Haloacid dehalogenase-like hydrolase LIS83_01965 PF00202 Aminotransferase class-III LIS83_01970 PF00158 Sigma-54 interaction domain LIS83_01975 PF00171 Aldehyde dehydrogenase family LIS83_01980 PF00893 Small Multidrug Resistance protein LIS83_01985 PF02073 Thermophilic metalloprotease (M29) LIS83_02000 PF07670 Nucleoside recognition LIS83_02000 PF07662 Na+ dependent nucleoside transporter C-terminus LIS83_02000 PF01773 Na+ dependent nucleoside transporter N-terminus LIS83_02005 PF02475 Met-10+ like-protein LIS83_02005 PF01938 TRAM domain LIS83_02005 PF05958 tRNA (Uracil-5-)-methyltransferase LIS83_02010 PF01207 Dihydrouridine synthase (Dus) LIS83_02015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_02015 PF13426 PAS domain LIS83_02015 PF13188 PAS domain LIS83_02015 PF00512 His Kinase A (phospho-acceptor) domain LIS83_02015 PF00989 PAS fold LIS83_02020 PF07308 Protein of unknown function (DUF1456) LIS83_02035 PF13378 Enolase C-terminal domain-like LIS83_02035 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LIS83_02045 PF03553 Na+/H+ antiporter family LIS83_02050 PF01546 Peptidase family M20/M25/M40 LIS83_02050 PF07687 Peptidase dimerisation domain LIS83_02060 PF13192 Thioredoxin domain LIS83_02060 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIS83_02065 PF00578 AhpC/TSA family LIS83_02070 PF01636 Phosphotransferase enzyme family LIS83_02075 PF01008 Initiation factor 2 subunit family LIS83_02080 PF00596 Class II Aldolase and Adducin N-terminal domain LIS83_02090 PF01032 FecCD transport family LIS83_02095 PF01032 FecCD transport family LIS83_02100 PF01497 Periplasmic binding protein LIS83_02105 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIS83_02115 PF12728 Helix-turn-helix domain LIS83_02145 PF13426 PAS domain LIS83_02145 PF13188 PAS domain LIS83_02145 PF00989 PAS fold LIS83_02145 PF00512 His Kinase A (phospho-acceptor) domain LIS83_02145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_02165 PF10127 RNA repair pathway DNA polymerase beta family LIS83_02170 PF07690 Major Facilitator Superfamily LIS83_02175 PF00355 Rieske [2Fe-2S] domain LIS83_02175 PF01266 FAD dependent oxidoreductase LIS83_02185 PF00535 Glycosyl transferase family 2 LIS83_02195 PF00072 Response regulator receiver domain LIS83_02200 PF00528 Binding-protein-dependent transport system inner membrane component LIS83_02205 PF00497 Bacterial extracellular solute-binding proteins, family 3 LIS83_02210 PF00005 ABC transporter LIS83_02215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LIS83_02215 PF12729 Four helix bundle sensory module for signal transduction LIS83_02215 PF00672 HAMP domain LIS83_02220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LIS83_02220 PF02743 Cache domain LIS83_02220 PF00672 HAMP domain LIS83_02225 PF00128 Alpha amylase, catalytic domain LIS83_02225 PF16657 Maltogenic Amylase, C-terminal domain LIS83_02230 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LIS83_02230 PF00367 phosphotransferase system, EIIB LIS83_02230 PF02378 Phosphotransferase system, EIIC LIS83_02235 PF03372 Endonuclease/Exonuclease/phosphatase family LIS83_02240 PF01061 ABC-2 type transporter LIS83_02245 PF01131 DNA topoisomerase LIS83_02245 PF01751 Toprim domain LIS83_02250 PF02110 Hydroxyethylthiazole kinase family LIS83_02255 PF02581 Thiamine monophosphate synthase LIS83_02260 PF03605 Anaerobic c4-dicarboxylate membrane transporter LIS83_02265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LIS83_02265 PF00672 HAMP domain LIS83_02270 PF01910 Thiamine-binding protein LIS83_02275 PF00528 Binding-protein-dependent transport system inner membrane component LIS83_02285 PF00005 ABC transporter LIS83_02295 PF12848 ABC transporter LIS83_02295 PF00005 ABC transporter LIS83_02300 PF00704 Glycosyl hydrolases family 18 LIS83_02300 PF00041 Fibronectin type III domain LIS83_02325 PF08360 QacR-like protein, C-terminal region LIS83_02325 PF00440 Bacterial regulatory proteins, tetR family LIS83_02345 PF11700 Vacuole effluxer Atg22 like LIS83_02360 PF03129 Anticodon binding domain LIS83_02360 PF09180 Prolyl-tRNA synthetase, C-terminal LIS83_02360 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LIS83_02370 PF00480 ROK family LIS83_02375 PF02342 TerD domain LIS83_02380 PF02342 TerD domain LIS83_02385 PF02342 TerD domain LIS83_02390 PF03741 Integral membrane protein TerC family LIS83_02395 PF14266 Putative component of 'biosynthetic module' LIS83_02400 PF05816 Toxic anion resistance protein (TelA) LIS83_02405 PF00689 Cation transporting ATPase, C-terminus LIS83_02405 PF00690 Cation transporter/ATPase, N-terminus LIS83_02410 PF06569 Protein of unknown function (DUF1128) LIS83_02415 PF01451 Low molecular weight phosphotyrosine protein phosphatase LIS83_02425 PF03631 Virulence factor BrkB LIS83_02435 PF00892 EamA-like transporter family LIS83_02445 PF10502 Signal peptidase, peptidase S26 LIS83_02455 PF09335 SNARE associated Golgi protein LIS83_02470 PF16242 Pyridoxamine 5'-phosphate oxidase like LIS83_02475 PF01699 Sodium/calcium exchanger protein LIS83_02480 PF14167 YfkD-like protein LIS83_02485 PF08756 YfkB-like domain LIS83_02485 PF04055 Radical SAM superfamily LIS83_02495 PF05683 Fumarase C-terminus LIS83_02495 PF05681 Fumarate hydratase (Fumerase) LIS83_02500 PF01522 Polysaccharide deacetylase LIS83_02505 PF00730 HhH-GPD superfamily base excision DNA repair protein LIS83_02510 PF01938 TRAM domain LIS83_02510 PF05958 tRNA (Uracil-5-)-methyltransferase LIS83_02515 PF01416 tRNA pseudouridine synthase LIS83_02535 PF07687 Peptidase dimerisation domain LIS83_02535 PF01546 Peptidase family M20/M25/M40 LIS83_02560 PF04960 Glutaminase LIS83_02565 PF00367 phosphotransferase system, EIIB LIS83_02565 PF02378 Phosphotransferase system, EIIC LIS83_02570 PF00144 Beta-lactamase LIS83_02585 PF00535 Glycosyl transferase family 2 LIS83_02590 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LIS83_02590 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LIS83_02590 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LIS83_02595 PF02911 Formyl transferase, C-terminal domain LIS83_02595 PF01370 NAD dependent epimerase/dehydratase family LIS83_02595 PF00551 Formyl transferase LIS83_02600 PF00535 Glycosyl transferase family 2 LIS83_02605 PF01228 Glycine radical LIS83_02605 PF02901 Pyruvate formate lyase-like LIS83_02610 PF04055 Radical SAM superfamily LIS83_02615 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase LIS83_02615 PF04101 Glycosyltransferase family 28 C-terminal domain LIS83_02630 PF01979 Amidohydrolase family LIS83_02635 PF08338 Domain of unknown function (DUF1731) LIS83_02635 PF01370 NAD dependent epimerase/dehydratase family LIS83_02640 PF02631 RecX family LIS83_02655 PF08176 Small acid-soluble spore protein K family LIS83_02660 PF14043 WVELL protein LIS83_02665 PF04307 LexA-binding, inner membrane-associated putative hydrolase LIS83_02670 PF00730 HhH-GPD superfamily base excision DNA repair protein LIS83_02670 PF14815 NUDIX domain LIS83_02680 PF04259 Small, acid-soluble spore protein, gamma-type LIS83_02685 PF14182 YgaB-like protein LIS83_02690 PF04167 Protein of unknown function (DUF402) LIS83_02695 PF00664 ABC transporter transmembrane region LIS83_02695 PF00005 ABC transporter LIS83_02700 PF06081 Aromatic acid exporter family member 1 LIS83_02705 PF00310 Glutamine amidotransferases class-II LIS83_02705 PF04898 Glutamate synthase central domain LIS83_02705 PF01493 GXGXG motif LIS83_02705 PF01645 Conserved region in glutamate synthase LIS83_02710 PF00202 Aminotransferase class-III LIS83_02715 PF00005 ABC transporter LIS83_02730 PF07885 Ion channel LIS83_02735 PF00578 AhpC/TSA family LIS83_02740 PF01475 Ferric uptake regulator family LIS83_02745 PF11023 Zinc-ribbon containing domain LIS83_02840 PF02899 Phage integrase, N-terminal SAM-like domain LIS83_02840 PF00589 Phage integrase family LIS83_02875 PF02899 Phage integrase, N-terminal SAM-like domain LIS83_02875 PF00589 Phage integrase family LIS83_02895 PF01709 Transcriptional regulator LIS83_02900 PF13344 Haloacid dehalogenase-like hydrolase LIS83_02900 PF00293 NUDIX domain LIS83_02905 PF00912 Transglycosylase LIS83_02905 PF00905 Penicillin binding protein transpeptidase domain LIS83_02910 PF13462 Thioredoxin LIS83_02920 PF08331 Domain of unknown function (DUF1730) LIS83_02925 PF12671 Putative amidase domain LIS83_02930 PF00588 SpoU rRNA Methylase family LIS83_02935 PF00990 Diguanylate cyclase, GGDEF domain LIS83_02935 PF00498 FHA domain LIS83_02935 PF00563 EAL domain LIS83_02940 PF06798 PrkA serine protein kinase C-terminal domain LIS83_02940 PF08298 PrkA AAA domain LIS83_02945 PF04285 Protein of unknown function (DUF444) LIS83_02960 PF02028 BCCT, betaine/carnitine/choline family transporter LIS83_02965 PF18496 Collagenase G catalytic helper subdomain LIS83_02965 PF01752 Collagenase LIS83_02965 PF08453 Peptidase family M9 N-terminal LIS83_02975 PF15975 Flotillin LIS83_02975 PF01145 SPFH domain / Band 7 family LIS83_02980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LIS83_02980 PF02743 Cache domain LIS83_02980 PF00672 HAMP domain LIS83_02985 PF17203 Single cache domain 3 LIS83_02985 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LIS83_02985 PF00989 PAS fold LIS83_02985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_02990 PF00072 Response regulator receiver domain LIS83_02990 PF12431 Transcriptional regulator LIS83_02995 PF03600 Citrate transporter LIS83_03015 PF04309 Glycerol-3-phosphate responsive antiterminator LIS83_03020 PF17912 MalK OB fold domain LIS83_03020 PF00005 ABC transporter LIS83_03025 PF00528 Binding-protein-dependent transport system inner membrane component LIS83_03030 PF00528 Binding-protein-dependent transport system inner membrane component LIS83_03035 PF13416 Bacterial extracellular solute-binding protein LIS83_03040 PF00149 Calcineurin-like phosphoesterase LIS83_03045 PF00072 Response regulator receiver domain LIS83_03045 PF00486 Transcriptional regulatory protein, C terminal LIS83_03050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_03050 PF00512 His Kinase A (phospho-acceptor) domain LIS83_03060 PF13529 Peptidase_C39 like family LIS83_03065 PF02743 Cache domain LIS83_03065 PF00672 HAMP domain LIS83_03065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LIS83_03070 PF17203 Single cache domain 3 LIS83_03070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_03070 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LIS83_03070 PF00989 PAS fold LIS83_03075 PF00072 Response regulator receiver domain LIS83_03080 PF03390 2-hydroxycarboxylate transporter family LIS83_03085 PF03949 Malic enzyme, NAD binding domain LIS83_03085 PF00390 Malic enzyme, N-terminal domain LIS83_03095 PF00892 EamA-like transporter family LIS83_03100 PF00392 Bacterial regulatory proteins, gntR family LIS83_03100 PF00155 Aminotransferase class I and II LIS83_03110 PF18698 Histidine kinase sensor domain LIS83_03110 PF00672 HAMP domain LIS83_03110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_03110 PF00989 PAS fold LIS83_03110 PF00512 His Kinase A (phospho-acceptor) domain LIS83_03115 PF00486 Transcriptional regulatory protein, C terminal LIS83_03115 PF00072 Response regulator receiver domain LIS83_03120 PF00583 Acetyltransferase (GNAT) family LIS83_03120 PF13508 Acetyltransferase (GNAT) domain LIS83_03125 PF02634 FdhD/NarQ family LIS83_03130 PF00037 4Fe-4S binding domain LIS83_03130 PF00384 Molybdopterin oxidoreductase LIS83_03130 PF01568 Molydopterin dinucleotide binding domain LIS83_03130 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LIS83_03130 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LIS83_03135 PF07849 Protein of unknown function (DUF1641) LIS83_03145 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LIS83_03145 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LIS83_03150 PF13520 Amino acid permease LIS83_03155 PF01022 Bacterial regulatory protein, arsR family LIS83_03160 PF00403 Heavy-metal-associated domain LIS83_03165 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LIS83_03165 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain LIS83_03165 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LIS83_03180 PF02868 Thermolysin metallopeptidase, alpha-helical domain LIS83_03180 PF01447 Thermolysin metallopeptidase, catalytic domain LIS83_03180 PF03413 Peptidase propeptide and YPEB domain LIS83_03180 PF07504 Fungalysin/Thermolysin Propeptide Motif LIS83_03200 PF04294 VanW like protein LIS83_03205 PF03816 Cell envelope-related transcriptional attenuator domain LIS83_03210 PF01773 Na+ dependent nucleoside transporter N-terminus LIS83_03210 PF07662 Na+ dependent nucleoside transporter C-terminus LIS83_03215 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LIS83_03220 PF01595 Cyclin M transmembrane N-terminal domain LIS83_03220 PF03471 Transporter associated domain LIS83_03220 PF00571 CBS domain LIS83_03225 PF10415 Fumarase C C-terminus LIS83_03225 PF00206 Lyase LIS83_03230 PF02652 L-lactate permease LIS83_03235 PF01022 Bacterial regulatory protein, arsR family LIS83_03240 PF08141 Small acid-soluble spore protein H family LIS83_03245 PF00854 POT family LIS83_03250 PF01497 Periplasmic binding protein LIS83_03255 PF01032 FecCD transport family LIS83_03260 PF01032 FecCD transport family LIS83_03265 PF00005 ABC transporter LIS83_03270 PF08241 Methyltransferase domain LIS83_03275 PF00155 Aminotransferase class I and II LIS83_03280 PF01370 NAD dependent epimerase/dehydratase family LIS83_03285 PF00156 Phosphoribosyl transferase domain LIS83_03290 PF13344 Haloacid dehalogenase-like hydrolase LIS83_03290 PF00293 NUDIX domain LIS83_03295 PF00092 von Willebrand factor type A domain LIS83_03300 PF07728 AAA domain (dynein-related subfamily) LIS83_03305 PF13396 Phospholipase_D-nuclease N-terminal LIS83_03305 PF13091 PLD-like domain LIS83_03315 PF03707 Bacterial signalling protein N terminal repeat LIS83_03315 PF00990 Diguanylate cyclase, GGDEF domain LIS83_03315 PF00563 EAL domain LIS83_03320 PF13520 Amino acid permease LIS83_03325 PF07702 UTRA domain LIS83_03325 PF00392 Bacterial regulatory proteins, gntR family LIS83_03330 PF00367 phosphotransferase system, EIIB LIS83_03330 PF02378 Phosphotransferase system, EIIC LIS83_03335 PF16657 Maltogenic Amylase, C-terminal domain LIS83_03335 PF00128 Alpha amylase, catalytic domain LIS83_03350 PF03323 Bacillus/Clostridium GerA spore germination protein LIS83_03355 PF07730 Histidine kinase LIS83_03355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_03355 PF13492 GAF domain LIS83_03360 PF00072 Response regulator receiver domain LIS83_03360 PF00196 Bacterial regulatory proteins, luxR family LIS83_03365 PF00082 Subtilase family LIS83_03365 PF05922 Peptidase inhibitor I9 LIS83_03365 PF13860 FlgD Ig-like domain LIS83_03365 PF02225 PA domain LIS83_03370 PF12389 Camelysin metallo-endopeptidase LIS83_03380 PF01636 Phosphotransferase enzyme family LIS83_03385 PF01235 Sodium:alanine symporter family LIS83_03390 PF00005 ABC transporter LIS83_03395 PF00497 Bacterial extracellular solute-binding proteins, family 3 LIS83_03400 PF00528 Binding-protein-dependent transport system inner membrane component LIS83_03405 PF00528 Binding-protein-dependent transport system inner membrane component LIS83_03410 PF00324 Amino acid permease LIS83_03435 PF08279 HTH domain LIS83_03435 PF13280 WYL domain LIS83_03440 PF01872 RibD C-terminal domain LIS83_03445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_03445 PF18698 Histidine kinase sensor domain LIS83_03445 PF00672 HAMP domain LIS83_03445 PF00512 His Kinase A (phospho-acceptor) domain LIS83_03445 PF00989 PAS fold LIS83_03450 PF00072 Response regulator receiver domain LIS83_03450 PF00486 Transcriptional regulatory protein, C terminal LIS83_03460 PF01740 STAS domain LIS83_03460 PF00916 Sulfate permease family LIS83_03465 PF00582 Universal stress protein family LIS83_03475 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LIS83_03480 PF00528 Binding-protein-dependent transport system inner membrane component LIS83_03485 PF00528 Binding-protein-dependent transport system inner membrane component LIS83_03490 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LIS83_03490 PF00005 ABC transporter LIS83_03495 PF00005 ABC transporter LIS83_03495 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LIS83_03500 PF07690 Major Facilitator Superfamily LIS83_03505 PF01047 MarR family LIS83_03510 PF07690 Major Facilitator Superfamily LIS83_03515 PF00356 Bacterial regulatory proteins, lacI family LIS83_03520 PF00294 pfkB family carbohydrate kinase LIS83_03525 PF05025 RbsD / FucU transport protein family LIS83_03530 PF00005 ABC transporter LIS83_03535 PF02653 Branched-chain amino acid transport system / permease component LIS83_03540 PF13407 Periplasmic binding protein domain LIS83_03545 PF00923 Transaldolase/Fructose-6-phosphate aldolase LIS83_03550 PF05547 Immune inhibitor A peptidase M6 LIS83_03560 PF08240 Alcohol dehydrogenase GroES-like domain LIS83_03560 PF00107 Zinc-binding dehydrogenase LIS83_03570 PF00882 Zinc dependent phospholipase C LIS83_03575 PF03372 Endonuclease/Exonuclease/phosphatase family LIS83_03600 PF02673 Bacitracin resistance protein BacA LIS83_03605 PF00672 HAMP domain LIS83_03605 PF02743 Cache domain LIS83_03605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LIS83_03610 PF06725 3D domain LIS83_03610 PF01476 LysM domain LIS83_03615 PF01381 Helix-turn-helix LIS83_03625 PF04203 Sortase domain LIS83_03630 PF00854 POT family LIS83_03635 PF05525 Branched-chain amino acid transport protein LIS83_03650 PF00324 Amino acid permease LIS83_03655 PF00860 Permease family LIS83_03670 PF13673 Acetyltransferase (GNAT) domain LIS83_03680 PF00999 Sodium/hydrogen exchanger family LIS83_03680 PF02080 TrkA-C domain LIS83_03680 PF02254 TrkA-N domain LIS83_03690 PF00510 Cytochrome c oxidase subunit III LIS83_03695 PF00115 Cytochrome C and Quinol oxidase polypeptide I LIS83_03700 PF02790 Cytochrome C oxidase subunit II, transmembrane domain LIS83_03705 PF13529 Peptidase_C39 like family LIS83_03710 PF01546 Peptidase family M20/M25/M40 LIS83_03710 PF07687 Peptidase dimerisation domain LIS83_03715 PF11755 Protein of unknown function (DUF3311) LIS83_03720 PF00474 Sodium:solute symporter family LIS83_03725 PF03323 Bacillus/Clostridium GerA spore germination protein LIS83_03730 PF03845 Spore germination protein LIS83_03735 PF05504 Spore germination B3/ GerAC like, C-terminal LIS83_03740 PF07670 Nucleoside recognition LIS83_03740 PF17910 FeoB cytosolic helical domain LIS83_03740 PF02421 Ferrous iron transport protein B LIS83_03740 PF07664 Ferrous iron transport protein B C terminus LIS83_03745 PF07664 Ferrous iron transport protein B C terminus LIS83_03745 PF17910 FeoB cytosolic helical domain LIS83_03745 PF02421 Ferrous iron transport protein B LIS83_03745 PF07670 Nucleoside recognition LIS83_03750 PF07670 Nucleoside recognition LIS83_03750 PF07664 Ferrous iron transport protein B C terminus LIS83_03750 PF04023 FeoA domain LIS83_03750 PF02421 Ferrous iron transport protein B LIS83_03750 PF17910 FeoB cytosolic helical domain LIS83_03755 PF12849 PBP superfamily domain LIS83_03760 PF00528 Binding-protein-dependent transport system inner membrane component LIS83_03765 PF00528 Binding-protein-dependent transport system inner membrane component LIS83_03775 PF00873 AcrB/AcrD/AcrF family LIS83_03895 PF00571 CBS domain LIS83_03910 PF00246 Zinc carboxypeptidase LIS83_03910 PF08239 Bacterial SH3 domain LIS83_03915 PF03070 TENA/THI-4/PQQC family LIS83_03920 PF00005 ABC transporter LIS83_03925 PF00528 Binding-protein-dependent transport system inner membrane component LIS83_03930 PF09084 NMT1/THI5 like LIS83_03935 PF02581 Thiamine monophosphate synthase LIS83_03940 PF01266 FAD dependent oxidoreductase LIS83_03945 PF02597 ThiS family LIS83_03950 PF05690 Thiazole biosynthesis protein ThiG LIS83_03955 PF00899 ThiF family LIS83_03960 PF08543 Phosphomethylpyrimidine kinase LIS83_03985 PF03814 Potassium-transporting ATPase A subunit LIS83_03995 PF02669 K+-transporting ATPase, c chain LIS83_04000 PF02702 Osmosensitive K+ channel His kinase sensor domain LIS83_04005 PF07690 Major Facilitator Superfamily LIS83_04010 PF01047 MarR family LIS83_04035 PF00005 ABC transporter LIS83_04035 PF02687 FtsX-like permease family LIS83_04035 PF12704 MacB-like periplasmic core domain LIS83_04045 PF00860 Permease family LIS83_04055 PF17969 L,D-transpeptidase C-terminal domain LIS83_04055 PF03734 L,D-transpeptidase catalytic domain LIS83_04065 PF00294 pfkB family carbohydrate kinase LIS83_04070 PF08244 Glycosyl hydrolases family 32 C terminal LIS83_04070 PF00251 Glycosyl hydrolases family 32 N-terminal domain LIS83_04075 PF00367 phosphotransferase system, EIIB LIS83_04075 PF02378 Phosphotransferase system, EIIC LIS83_04080 PF00356 Bacterial regulatory proteins, lacI family LIS83_04080 PF13407 Periplasmic binding protein domain LIS83_04090 PF00085 Thioredoxin LIS83_04095 PF02600 Disulfide bond formation protein DsbB LIS83_04100 PF14148 YhdB-like protein LIS83_04110 PF03845 Spore germination protein LIS83_04120 PF03323 Bacillus/Clostridium GerA spore germination protein LIS83_04130 PF00881 Nitroreductase family LIS83_04135 PF04293 SpoVR like protein LIS83_04180 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LIS83_04180 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIS83_04185 PF02583 Metal-sensitive transcriptional repressor LIS83_04190 PF01206 Sulfurtransferase TusA LIS83_04190 PF00581 Rhodanese-like domain LIS83_04195 PF00581 Rhodanese-like domain LIS83_04195 PF00753 Metallo-beta-lactamase superfamily LIS83_04200 PF01206 Sulfurtransferase TusA LIS83_04205 PF00581 Rhodanese-like domain LIS83_04215 PF13686 DsrE/DsrF/DrsH-like family LIS83_04220 PF01925 Sulfite exporter TauE/SafE LIS83_04230 PF03816 Cell envelope-related transcriptional attenuator domain LIS83_04235 PF08240 Alcohol dehydrogenase GroES-like domain LIS83_04235 PF00107 Zinc-binding dehydrogenase LIS83_04240 PF02690 Na+/Pi-cotransporter LIS83_04245 PF07690 Major Facilitator Superfamily LIS83_04255 PF08279 HTH domain LIS83_04255 PF05043 Mga helix-turn-helix domain LIS83_04255 PF00874 PRD domain LIS83_04255 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LIS83_04260 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LIS83_04265 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LIS83_04270 PF02378 Phosphotransferase system, EIIC LIS83_04285 PF06725 3D domain LIS83_04285 PF01476 LysM domain LIS83_04290 PF12704 MacB-like periplasmic core domain LIS83_04290 PF02687 FtsX-like permease family LIS83_04295 PF00005 ABC transporter LIS83_04305 PF09529 Integral membrane protein (intg_mem_TP0381) LIS83_04320 PF02687 FtsX-like permease family LIS83_04325 PF05525 Branched-chain amino acid transport protein LIS83_04330 PF05067 Manganese containing catalase LIS83_04335 PF12652 CotJB protein LIS83_04340 PF11007 Spore coat associated protein JA (CotJA) LIS83_04355 PF02735 Ku70/Ku80 beta-barrel domain LIS83_04365 PF09335 SNARE associated Golgi protein LIS83_04400 PF13520 Amino acid permease LIS83_04405 PF00999 Sodium/hydrogen exchanger family LIS83_04415 PF01380 SIS domain LIS83_04415 PF01418 Helix-turn-helix domain, rpiR family LIS83_04420 PF01380 SIS domain LIS83_04425 PF00367 phosphotransferase system, EIIB LIS83_04425 PF02378 Phosphotransferase system, EIIC LIS83_04440 PF07681 DoxX LIS83_04455 PF00892 EamA-like transporter family LIS83_04460 PF01037 Lrp/AsnC ligand binding domain LIS83_04470 PF00893 Small Multidrug Resistance protein LIS83_04475 PF00893 Small Multidrug Resistance protein LIS83_04480 PF17934 Tetracyclin repressor-like, C-terminal domain LIS83_04480 PF00440 Bacterial regulatory proteins, tetR family LIS83_04485 PF07690 Major Facilitator Superfamily LIS83_04490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LIS83_04490 PF12793 Sugar transport-related sRNA regulator N-term LIS83_04495 PF07690 Major Facilitator Superfamily LIS83_04505 PF01965 DJ-1/PfpI family LIS83_04510 PF06628 Catalase-related immune-responsive LIS83_04510 PF00199 Catalase LIS83_04510 PF18011 C-terminal domain found in long catalases LIS83_04520 PF13520 Amino acid permease LIS83_04535 PF00171 Aldehyde dehydrogenase family LIS83_04540 PF00664 ABC transporter transmembrane region LIS83_04540 PF00005 ABC transporter LIS83_04545 PF00664 ABC transporter transmembrane region LIS83_04545 PF00005 ABC transporter LIS83_04550 PF00497 Bacterial extracellular solute-binding proteins, family 3 LIS83_04555 PF00528 Binding-protein-dependent transport system inner membrane component LIS83_04560 PF00005 ABC transporter LIS83_04565 PF00269 Small, acid-soluble spore proteins, alpha/beta type LIS83_04575 PF14398 YheC/D like ATP-grasp LIS83_04585 PF04286 Protein of unknown function (DUF445) LIS83_04590 PF06133 Control of competence regulator ComK, YlbF/YmcA LIS83_04600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_04600 PF07730 Histidine kinase LIS83_04605 PF00196 Bacterial regulatory proteins, luxR family LIS83_04605 PF00072 Response regulator receiver domain LIS83_04645 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LIS83_04645 PF00205 Thiamine pyrophosphate enzyme, central domain LIS83_04645 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LIS83_04650 PF03306 Alpha-acetolactate decarboxylase LIS83_04655 PF02245 Methylpurine-DNA glycosylase (MPG) LIS83_04665 PF01510 N-acetylmuramoyl-L-alanine amidase LIS83_04665 PF01471 Putative peptidoglycan binding domain LIS83_04670 PF04055 Radical SAM superfamily LIS83_04675 PF00501 AMP-binding enzyme LIS83_04675 PF13193 AMP-binding enzyme C-terminal domain LIS83_04685 PF01740 STAS domain LIS83_04685 PF00916 Sulfate permease family LIS83_04710 PF07517 SecA DEAD-like domain LIS83_04710 PF01043 SecA preprotein cross-linking domain LIS83_04710 PF07516 SecA Wing and Scaffold domain LIS83_04715 PF14667 Polysaccharide biosynthesis C-terminal domain LIS83_04715 PF01943 Polysaccharide biosynthesis protein LIS83_04725 PF02368 Bacterial Ig-like domain (group 2) LIS83_04725 PF00395 S-layer homology domain LIS83_04725 PF13205 Bacterial Ig-like domain LIS83_04730 PF00395 S-layer homology domain LIS83_04740 PF03062 MBOAT, membrane-bound O-acyltransferase family LIS83_04750 PF00378 Enoyl-CoA hydratase/isomerase LIS83_04770 PF05343 M42 glutamyl aminopeptidase LIS83_04775 PF01520 N-acetylmuramoyl-L-alanine amidase LIS83_04775 PF00395 S-layer homology domain LIS83_04785 PF11121 Protein of unknown function (DUF2639) LIS83_04790 PF05544 Proline racemase LIS83_04795 PF02423 Ornithine cyclodeaminase/mu-crystallin family LIS83_04810 PF00083 Sugar (and other) transporter LIS83_04815 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LIS83_04815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_04820 PF12431 Transcriptional regulator LIS83_04820 PF08279 HTH domain LIS83_04820 PF00072 Response regulator receiver domain LIS83_04825 PF03401 Tripartite tricarboxylate transporter family receptor LIS83_04865 PF06445 GyrI-like small molecule binding domain LIS83_04865 PF13411 MerR HTH family regulatory protein LIS83_04880 PF00772 DnaB-like helicase N terminal domain LIS83_04880 PF03796 DnaB-like helicase C terminal domain LIS83_04890 PF07728 AAA domain (dynein-related subfamily) LIS83_04890 PF12102 Domain of unknown function (DUF3578) LIS83_04900 PF01555 DNA methylase LIS83_04905 PF00145 C-5 cytosine-specific DNA methylase LIS83_04920 PF01925 Sulfite exporter TauE/SafE LIS83_04975 PF07993 Male sterility protein LIS83_04975 PF00550 Phosphopantetheine attachment site LIS83_04980 PF00440 Bacterial regulatory proteins, tetR family LIS83_04980 PF18665 Tetracyclin repressor-like, C-terminal domain LIS83_04995 PF01066 CDP-alcohol phosphatidyltransferase LIS83_05055 PF01810 LysE type translocator LIS83_05060 PF02733 Dak1 domain LIS83_05070 PF02733 Dak1 domain LIS83_05075 PF02525 Flavodoxin-like fold LIS83_05080 PF02082 Transcriptional regulator LIS83_05085 PF02734 DAK2 domain LIS83_05095 PF18801 response regulator aspartate phosphatase H, N terminal LIS83_05110 PF01966 HD domain LIS83_05110 PF00072 Response regulator receiver domain LIS83_05130 PF00395 S-layer homology domain LIS83_05155 PF11181 Heat induced stress protein YflT LIS83_05160 PF05532 CsbD-like LIS83_05175 PF01740 STAS domain LIS83_05180 PF13581 Histidine kinase-like ATPase domain LIS83_05185 PF04542 Sigma-70 region 2 LIS83_05185 PF04539 Sigma-70 region 3 LIS83_05185 PF04545 Sigma-70, region 4 LIS83_05195 PF07228 Stage II sporulation protein E (SpoIIE) LIS83_05195 PF13426 PAS domain LIS83_05200 PF01739 CheR methyltransferase, SAM binding domain LIS83_05200 PF03705 CheR methyltransferase, all-alpha domain LIS83_05205 PF00497 Bacterial extracellular solute-binding proteins, family 3 LIS83_05205 PF01627 Hpt domain LIS83_05205 PF00072 Response regulator receiver domain LIS83_05205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_05205 PF00512 His Kinase A (phospho-acceptor) domain LIS83_05230 PF01906 Putative heavy-metal-binding LIS83_05240 PF08240 Alcohol dehydrogenase GroES-like domain LIS83_05240 PF00107 Zinc-binding dehydrogenase LIS83_05245 PF07730 Histidine kinase LIS83_05245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_05250 PF00196 Bacterial regulatory proteins, luxR family LIS83_05250 PF00072 Response regulator receiver domain LIS83_05260 PF11121 Protein of unknown function (DUF2639) LIS83_05275 PF00149 Calcineurin-like phosphoesterase LIS83_05280 PF13514 AAA domain LIS83_05285 PF01966 HD domain LIS83_05285 PF01336 OB-fold nucleic acid binding domain LIS83_05315 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LIS83_05320 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LIS83_05330 PF18801 response regulator aspartate phosphatase H, N terminal LIS83_05340 PF00561 alpha/beta hydrolase fold LIS83_05340 PF08386 TAP-like protein LIS83_05360 PF04309 Glycerol-3-phosphate responsive antiterminator LIS83_05365 PF00230 Major intrinsic protein LIS83_05370 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LIS83_05370 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LIS83_05375 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LIS83_05375 PF01266 FAD dependent oxidoreductase LIS83_05400 PF04542 Sigma-70 region 2 LIS83_05400 PF08281 Sigma-70, region 4 LIS83_05425 PF07690 Major Facilitator Superfamily LIS83_05430 PF07690 Major Facilitator Superfamily LIS83_05440 PF13538 UvrD-like helicase C-terminal domain LIS83_05460 PF01047 MarR family LIS83_05465 PF12732 YtxH-like protein LIS83_05470 PF01230 HIT domain LIS83_05475 PF00005 ABC transporter LIS83_05480 PF05975 Bacterial ABC transporter protein EcsB LIS83_05485 PF12787 EcsC protein family LIS83_05555 PF17934 Tetracyclin repressor-like, C-terminal domain LIS83_05555 PF00440 Bacterial regulatory proteins, tetR family LIS83_05565 PF03703 Bacterial PH domain LIS83_05570 PF03703 Bacterial PH domain LIS83_05590 PF01520 N-acetylmuramoyl-L-alanine amidase LIS83_05590 PF00395 S-layer homology domain LIS83_05620 PF03703 Bacterial PH domain LIS83_05625 PF03703 Bacterial PH domain LIS83_05630 PF03992 Antibiotic biosynthesis monooxygenase LIS83_05635 PF00905 Penicillin binding protein transpeptidase domain LIS83_05635 PF00912 Transglycosylase LIS83_05640 PF01208 Uroporphyrinogen decarboxylase (URO-D) LIS83_05645 PF00762 Ferrochelatase LIS83_05650 PF01593 Flavin containing amine oxidoreductase LIS83_05680 PF03965 Penicillinase repressor LIS83_05690 PF00440 Bacterial regulatory proteins, tetR family LIS83_05690 PF17932 Tetracyclin repressor-like, C-terminal domain LIS83_05720 PF00356 Bacterial regulatory proteins, lacI family LIS83_05725 PF14149 YhfH-like protein LIS83_05730 PF12706 Beta-lactamase superfamily domain LIS83_05735 PF10437 Bacterial lipoate protein ligase C-terminus LIS83_05735 PF03099 Biotin/lipoate A/B protein ligase family LIS83_05745 PF00501 AMP-binding enzyme LIS83_05745 PF13193 AMP-binding enzyme C-terminal domain LIS83_05755 PF01520 N-acetylmuramoyl-L-alanine amidase LIS83_05755 PF00395 S-layer homology domain LIS83_05810 PF12146 Serine aminopeptidase, S33 LIS83_05815 PF00149 Calcineurin-like phosphoesterase LIS83_05825 PF01966 HD domain LIS83_05835 PF04542 Sigma-70 region 2 LIS83_05835 PF08281 Sigma-70, region 4 LIS83_05840 PF06445 GyrI-like small molecule binding domain LIS83_05840 PF12833 Helix-turn-helix domain LIS83_05845 PF00512 His Kinase A (phospho-acceptor) domain LIS83_05845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_05850 PF00072 Response regulator receiver domain LIS83_05850 PF00486 Transcriptional regulatory protein, C terminal LIS83_05875 PF01435 Peptidase family M48 LIS83_05875 PF16491 CAAX prenyl protease N-terminal, five membrane helices LIS83_05880 PF00892 EamA-like transporter family LIS83_05885 PF03424 Carbohydrate binding domain (family 17/28) LIS83_05885 PF00150 Cellulase (glycosyl hydrolase family 5) LIS83_05885 PF00395 S-layer homology domain LIS83_05895 PF00395 S-layer homology domain LIS83_05900 PF01274 Malate synthase LIS83_05905 PF00463 Isocitrate lyase family LIS83_05915 PF00313 'Cold-shock' DNA-binding domain LIS83_05930 PF06338 ComK protein LIS83_05935 PF09335 SNARE associated Golgi protein LIS83_05940 PF10502 Signal peptidase, peptidase S26 LIS83_05945 PF12705 PD-(D/E)XK nuclease superfamily LIS83_05945 PF13361 UvrD-like helicase C-terminal domain LIS83_05950 PF00580 UvrD/REP helicase N-terminal domain LIS83_05950 PF13361 UvrD-like helicase C-terminal domain LIS83_05950 PF12705 PD-(D/E)XK nuclease superfamily LIS83_05960 PF10676 Spore germination protein gerPA/gerPF LIS83_05965 PF10970 Spore germination protein GerPE LIS83_05975 PF10737 Spore germination protein GerPC LIS83_05980 PF10803 Spore germination GerPB LIS83_05985 PF10676 Spore germination protein gerPA/gerPF LIS83_05990 PF09388 Spo0E like sporulation regulatory protein LIS83_05995 PF01557 Fumarylacetoacetate (FAA) hydrolase family LIS83_06005 PF00202 Aminotransferase class-III LIS83_06010 PF07457 Protein of unknown function (DUF1516) LIS83_06020 PF13537 Glutamine amidotransferase domain LIS83_06020 PF00733 Asparagine synthase LIS83_06025 PF00762 Ferrochelatase LIS83_06030 PF00199 Catalase LIS83_06030 PF06628 Catalase-related immune-responsive LIS83_06035 PF00909 Ammonium Transporter Family LIS83_06040 PF00128 Alpha amylase, catalytic domain LIS83_06050 PF04461 Protein of unknown function (DUF520) LIS83_06055 PF13509 S1 domain LIS83_06055 PF17783 CvfB-like winged helix domain LIS83_06065 PF00639 PPIC-type PPIASE domain LIS83_06075 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LIS83_06075 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LIS83_06100 PF14168 YjzC-like protein LIS83_06105 PF10431 C-terminal, D2-small domain, of ClpB protein LIS83_06105 PF02861 Clp amino terminal domain, pathogenicity island component LIS83_06105 PF17871 AAA lid domain LIS83_06105 PF07724 AAA domain (Cdc48 subfamily) LIS83_06105 PF00004 ATPase family associated with various cellular activities (AAA) LIS83_06125 PF10815 ComZ LIS83_06130 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LIS83_06130 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LIS83_06135 PF00109 Beta-ketoacyl synthase, N-terminal domain LIS83_06135 PF02801 Beta-ketoacyl synthase, C-terminal domain LIS83_06140 PF10026 Predicted Zn-dependent protease (DUF2268) LIS83_06145 PF12227 Protein of unknown function (DUF3603) LIS83_06150 PF00579 tRNA synthetases class I (W and Y) LIS83_06160 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LIS83_06165 PF00528 Binding-protein-dependent transport system inner membrane component LIS83_06170 PF12911 N-terminal TM domain of oligopeptide transport permease C LIS83_06170 PF00528 Binding-protein-dependent transport system inner membrane component LIS83_06175 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LIS83_06175 PF00005 ABC transporter LIS83_06180 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LIS83_06180 PF00005 ABC transporter LIS83_06185 PF01554 MatE LIS83_06190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LIS83_06200 PF03960 ArsC family LIS83_06205 PF03741 Integral membrane protein TerC family LIS83_06210 PF05389 Negative regulator of genetic competence (MecA) LIS83_06215 PF13091 PLD-like domain LIS83_06215 PF13396 Phospholipase_D-nuclease N-terminal LIS83_06225 PF01432 Peptidase family M3 LIS83_06225 PF08439 Oligopeptidase F LIS83_06240 PF01152 Bacterial-like globin LIS83_06245 PF01928 CYTH domain LIS83_06255 PF04607 Region found in RelA / SpoT proteins LIS83_06260 PF01513 ATP-NAD kinase LIS83_06265 PF00849 RNA pseudouridylate synthase LIS83_06275 PF00149 Calcineurin-like phosphoesterase LIS83_06280 PF01098 Cell cycle protein LIS83_06285 PF00535 Glycosyl transferase family 2 LIS83_06290 PF08241 Methyltransferase domain LIS83_06295 PF05711 Macrocin-O-methyltransferase (TylF) LIS83_06305 PF13181 Tetratricopeptide repeat LIS83_06305 PF00535 Glycosyl transferase family 2 LIS83_06325 PF00483 Nucleotidyl transferase LIS83_06330 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LIS83_06335 PF16363 GDP-mannose 4,6 dehydratase LIS83_06340 PF04321 RmlD substrate binding domain LIS83_06360 PF07098 Protein of unknown function (DUF1360) LIS83_06380 PF00580 UvrD/REP helicase N-terminal domain LIS83_06380 PF13361 UvrD-like helicase C-terminal domain LIS83_06385 PF13673 Acetyltransferase (GNAT) domain LIS83_06395 PF00756 Putative esterase LIS83_06410 PF02368 Bacterial Ig-like domain (group 2) LIS83_06415 PF00474 Sodium:solute symporter family LIS83_06420 PF00425 chorismate binding enzyme LIS83_06420 PF04715 Anthranilate synthase component I, N terminal region LIS83_06425 PF02885 Glycosyl transferase family, helical bundle domain LIS83_06425 PF00591 Glycosyl transferase family, a/b domain LIS83_06425 PF00117 Glutamine amidotransferase class-I LIS83_06430 PF00591 Glycosyl transferase family, a/b domain LIS83_06430 PF02885 Glycosyl transferase family, helical bundle domain LIS83_06435 PF00218 Indole-3-glycerol phosphate synthase LIS83_06440 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LIS83_06445 PF00291 Pyridoxal-phosphate dependent enzyme LIS83_06450 PF00290 Tryptophan synthase alpha chain LIS83_06460 PF02652 L-lactate permease LIS83_06465 PF10042 Uncharacterized conserved protein (DUF2278) LIS83_06490 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LIS83_06490 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIS83_06505 PF01209 ubiE/COQ5 methyltransferase family LIS83_06525 PF00364 Biotin-requiring enzyme LIS83_06525 PF02817 e3 binding domain LIS83_06525 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LIS83_06530 PF00676 Dehydrogenase E1 component LIS83_06530 PF16870 2-oxoglutarate dehydrogenase C-terminal LIS83_06530 PF02779 Transketolase, pyrimidine binding domain LIS83_06535 PF01381 Helix-turn-helix LIS83_06595 PF13476 AAA domain LIS83_06595 PF10088 Uncharacterised protein conserved in bacteria (DUF2326) LIS83_06600 PF00149 Calcineurin-like phosphoesterase LIS83_06625 PF00768 D-alanyl-D-alanine carboxypeptidase LIS83_06625 PF07943 Penicillin-binding protein 5, C-terminal domain LIS83_06635 PF12389 Camelysin metallo-endopeptidase LIS83_06645 PF12389 Camelysin metallo-endopeptidase LIS83_06650 PF08671 Anti-repressor SinI LIS83_06650 PF01381 Helix-turn-helix LIS83_06660 PF05547 Immune inhibitor A peptidase M6 LIS83_06665 PF00171 Aldehyde dehydrogenase family LIS83_06670 PF08402 TOBE domain LIS83_06670 PF00005 ABC transporter LIS83_06675 PF00528 Binding-protein-dependent transport system inner membrane component LIS83_06680 PF00528 Binding-protein-dependent transport system inner membrane component LIS83_06685 PF13416 Bacterial extracellular solute-binding protein LIS83_06695 PF03176 MMPL family LIS83_06705 PF01479 S4 domain LIS83_06705 PF00849 RNA pseudouridylate synthase LIS83_06715 PF00188 Cysteine-rich secretory protein family LIS83_06720 PF02754 Cysteine-rich domain LIS83_06720 PF13183 4Fe-4S dicluster domain LIS83_06725 PF02913 FAD linked oxidases, C-terminal domain LIS83_06725 PF01565 FAD binding domain LIS83_06730 PF13556 PucR C-terminal helix-turn-helix domain LIS83_06730 PF17853 GGDEF-like domain LIS83_06730 PF05651 Putative sugar diacid recognition LIS83_06740 PF00486 Transcriptional regulatory protein, C terminal LIS83_06740 PF00072 Response regulator receiver domain LIS83_06745 PF00989 PAS fold LIS83_06745 PF00512 His Kinase A (phospho-acceptor) domain LIS83_06745 PF18698 Histidine kinase sensor domain LIS83_06745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_06745 PF00672 HAMP domain LIS83_06750 PF07729 FCD domain LIS83_06750 PF00392 Bacterial regulatory proteins, gntR family LIS83_06755 PF02754 Cysteine-rich domain LIS83_06760 PF11870 Domain of unknown function (DUF3390) LIS83_06760 PF13183 4Fe-4S dicluster domain LIS83_06760 PF02589 LUD domain LIS83_06765 PF02589 LUD domain LIS83_06770 PF01478 Type IV leader peptidase family LIS83_06770 PF06750 Bacterial Peptidase A24 N-terminal domain LIS83_06780 PF01226 Formate/nitrite transporter LIS83_06785 PF03741 Integral membrane protein TerC family LIS83_06790 PF02386 Cation transport protein LIS83_06795 PF00269 Small, acid-soluble spore proteins, alpha/beta type LIS83_06800 PF01575 MaoC like domain LIS83_06825 PF00561 alpha/beta hydrolase fold LIS83_06830 PF01266 FAD dependent oxidoreductase LIS83_06835 PF02386 Cation transport protein LIS83_06855 PF00005 ABC transporter LIS83_06855 PF08402 TOBE domain LIS83_06860 PF00528 Binding-protein-dependent transport system inner membrane component LIS83_06865 PF13419 Haloacid dehalogenase-like hydrolase LIS83_06870 PF00266 Aminotransferase class-V LIS83_06880 PF08220 DeoR-like helix-turn-helix domain LIS83_06880 PF00455 DeoR C terminal sensor domain LIS83_06885 PF00395 S-layer homology domain LIS83_06885 PF01520 N-acetylmuramoyl-L-alanine amidase LIS83_06890 PF00596 Class II Aldolase and Adducin N-terminal domain LIS83_06900 PF04748 Divergent polysaccharide deacetylase LIS83_06905 PF09388 Spo0E like sporulation regulatory protein LIS83_06910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_06910 PF00512 His Kinase A (phospho-acceptor) domain LIS83_06910 PF02743 Cache domain LIS83_06915 PF01047 MarR family LIS83_06925 PF12867 DinB superfamily LIS83_06935 PF00989 PAS fold LIS83_06935 PF00512 His Kinase A (phospho-acceptor) domain LIS83_06935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_06935 PF13188 PAS domain LIS83_06935 PF13426 PAS domain LIS83_06940 PF06508 Queuosine biosynthesis protein QueC LIS83_06945 PF01242 6-pyruvoyl tetrahydropterin synthase LIS83_06950 PF04055 Radical SAM superfamily LIS83_06955 PF14489 QueF-like protein LIS83_06960 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) LIS83_06990 PF07972 NrdI Flavodoxin like LIS83_07000 PF01844 HNH endonuclease LIS83_07010 PF00268 Ribonucleotide reductase, small chain LIS83_07015 PF00392 Bacterial regulatory proteins, gntR family LIS83_07020 PF00005 ABC transporter LIS83_07030 PF00005 ABC transporter LIS83_07050 PF01037 Lrp/AsnC ligand binding domain LIS83_07060 PF00857 Isochorismatase family LIS83_07070 PF02016 LD-carboxypeptidase N-terminal domain LIS83_07070 PF17676 LD-carboxypeptidase C-terminal domain LIS83_07075 PF03060 Nitronate monooxygenase LIS83_07080 PF04914 DltD protein LIS83_07085 PF00550 Phosphopantetheine attachment site LIS83_07090 PF03062 MBOAT, membrane-bound O-acyltransferase family LIS83_07095 PF00501 AMP-binding enzyme LIS83_07095 PF13193 AMP-binding enzyme C-terminal domain LIS83_07105 PF07687 Peptidase dimerisation domain LIS83_07105 PF01546 Peptidase family M20/M25/M40 LIS83_07115 PF00258 Flavodoxin LIS83_07150 PF01554 MatE LIS83_07155 PF02673 Bacitracin resistance protein BacA LIS83_07170 PF01047 MarR family LIS83_07180 PF00375 Sodium:dicarboxylate symporter family LIS83_07185 PF02386 Cation transport protein LIS83_07195 PF09579 Sporulation protein YtfJ (Spore_YtfJ) LIS83_07205 PF03698 Uncharacterised protein family (UPF0180) LIS83_07215 PF01063 Amino-transferase class IV LIS83_07220 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LIS83_07220 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LIS83_07220 PF00205 Thiamine pyrophosphate enzyme, central domain LIS83_07225 PF01842 ACT domain LIS83_07225 PF10369 Small subunit of acetolactate synthase LIS83_07230 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LIS83_07230 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LIS83_07235 PF08502 LeuA allosteric (dimerisation) domain LIS83_07235 PF00682 HMGL-like LIS83_07240 PF00180 Isocitrate/isopropylmalate dehydrogenase LIS83_07245 PF00330 Aconitase family (aconitate hydratase) LIS83_07250 PF00694 Aconitase C-terminal domain LIS83_07255 PF13393 Histidyl-tRNA synthetase LIS83_07260 PF01634 ATP phosphoribosyltransferase LIS83_07265 PF00815 Histidinol dehydrogenase LIS83_07270 PF00475 Imidazoleglycerol-phosphate dehydratase LIS83_07275 PF00117 Glutamine amidotransferase class-I LIS83_07280 PF00977 Histidine biosynthesis protein LIS83_07285 PF00977 Histidine biosynthesis protein LIS83_07290 PF01502 Phosphoribosyl-AMP cyclohydrolase LIS83_07295 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LIS83_07300 PF02811 PHP domain LIS83_07310 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LIS83_07310 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LIS83_07315 PF01066 CDP-alcohol phosphatidyltransferase LIS83_07320 PF00884 Sulfatase LIS83_07330 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LIS83_07330 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LIS83_07340 PF01507 Phosphoadenosine phosphosulfate reductase family LIS83_07345 PF01747 ATP-sulfurylase LIS83_07345 PF14306 PUA-like domain LIS83_07355 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LIS83_07355 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LIS83_07365 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LIS83_07370 PF01903 CbiX LIS83_07380 PF00209 Sodium:neurotransmitter symporter family LIS83_07390 PF00375 Sodium:dicarboxylate symporter family LIS83_07400 PF03553 Na+/H+ antiporter family LIS83_07415 PF09922 Cell wall-active antibiotics response 4TMS YvqF LIS83_07420 PF00672 HAMP domain LIS83_07420 PF07730 Histidine kinase LIS83_07420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_07425 PF00196 Bacterial regulatory proteins, luxR family LIS83_07425 PF00072 Response regulator receiver domain LIS83_07435 PF05525 Branched-chain amino acid transport protein LIS83_07445 PF08241 Methyltransferase domain LIS83_07470 PF00970 Oxidoreductase FAD-binding domain LIS83_07470 PF00042 Globin LIS83_07470 PF00175 Oxidoreductase NAD-binding domain LIS83_07485 PF01925 Sulfite exporter TauE/SafE LIS83_07490 PF01384 Phosphate transporter family LIS83_07495 PF01865 Protein of unknown function DUF47 LIS83_07500 PF00912 Transglycosylase LIS83_07500 PF00905 Penicillin binding protein transpeptidase domain LIS83_07520 PF00512 His Kinase A (phospho-acceptor) domain LIS83_07520 PF00989 PAS fold LIS83_07520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_07525 PF01904 Protein of unknown function DUF72 LIS83_07535 PF00589 Phage integrase family LIS83_07540 PF00512 His Kinase A (phospho-acceptor) domain LIS83_07540 PF00989 PAS fold LIS83_07540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_07540 PF16736 Single Cache-like LIS83_07545 PF01048 Phosphorylase superfamily LIS83_07560 PF09924 Uncharacterised conserved protein (DUF2156) LIS83_07560 PF03706 Lysylphosphatidylglycerol synthase TM region LIS83_07575 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LIS83_07575 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LIS83_07580 PF00768 D-alanyl-D-alanine carboxypeptidase LIS83_07580 PF07943 Penicillin-binding protein 5, C-terminal domain LIS83_07585 PF07670 Nucleoside recognition LIS83_07590 PF07670 Nucleoside recognition LIS83_07595 PF00849 RNA pseudouridylate synthase LIS83_07595 PF01479 S4 domain LIS83_07600 PF00578 AhpC/TSA family LIS83_07605 PF05140 ResB-like family LIS83_07610 PF01578 Cytochrome C assembly protein LIS83_07615 PF00486 Transcriptional regulatory protein, C terminal LIS83_07615 PF00072 Response regulator receiver domain LIS83_07620 PF00672 HAMP domain LIS83_07620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_07620 PF18698 Histidine kinase sensor domain LIS83_07620 PF00512 His Kinase A (phospho-acceptor) domain LIS83_07620 PF00989 PAS fold LIS83_07625 PF01923 Cobalamin adenosyltransferase LIS83_07630 PF01551 Peptidase family M23 LIS83_07640 PF12822 ECF transporter, substrate-specific component LIS83_07655 PF00271 Helicase conserved C-terminal domain LIS83_07655 PF00270 DEAD/DEAH box helicase LIS83_07660 PF02517 CPBP intramembrane metalloprotease LIS83_07670 PF00149 Calcineurin-like phosphoesterase LIS83_07675 PF02310 B12 binding domain LIS83_07675 PF13411 MerR HTH family regulatory protein LIS83_07675 PF02607 B12 binding domain LIS83_07680 PF05389 Negative regulator of genetic competence (MecA) LIS83_07685 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LIS83_07685 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LIS83_07710 PF17763 Glutaminase/Asparaginase C-terminal domain LIS83_07710 PF00710 Asparaginase, N-terminal LIS83_07720 PF02224 Cytidylate kinase LIS83_07725 PF00575 S1 RNA binding domain LIS83_07730 PF01070 FMN-dependent dehydrogenase LIS83_07735 PF14140 YpzI-like protein LIS83_07745 PF14045 YIEGIA protein LIS83_07755 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LIS83_07755 PF01926 50S ribosome-binding GTPase LIS83_07760 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LIS83_07760 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LIS83_07770 PF10966 Protein of unknown function (DUF2768) LIS83_07780 PF09547 Stage IV sporulation protein A (spore_IV_A) LIS83_07785 PF00216 Bacterial DNA-binding protein LIS83_07790 PF01227 GTP cyclohydrolase I LIS83_07795 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 LIS83_07800 PF01209 ubiE/COQ5 methyltransferase family LIS83_07805 PF00348 Polyprenyl synthetase LIS83_07810 PF00334 Nucleoside diphosphate kinase LIS83_07815 PF01264 Chorismate synthase LIS83_07820 PF01761 3-dehydroquinate synthase LIS83_07825 PF00155 Aminotransferase class I and II LIS83_07835 PF08858 IDEAL domain LIS83_07835 PF08864 UPF0302 domain LIS83_07840 PF10673 Protein of unknown function (DUF2487) LIS83_07845 PF00355 Rieske [2Fe-2S] domain LIS83_07850 PF00033 Cytochrome b/b6/petB LIS83_07855 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LIS83_07855 PF00032 Cytochrome b(C-terminal)/b6/petD LIS83_07860 PF07187 Protein of unknown function (DUF1405) LIS83_07870 PF09577 Sporulation protein YpjB (SpoYpjB) LIS83_07875 PF04298 Putative neutral zinc metallopeptidase LIS83_07885 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LIS83_07885 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LIS83_07890 PF03819 MazG nucleotide pyrophosphohydrolase domain LIS83_07895 PF05173 Dihydrodipicolinate reductase, C-terminus LIS83_07895 PF01113 Dihydrodipicolinate reductase, N-terminus LIS83_07900 PF02142 MGS-like domain LIS83_07905 PF02585 GlcNAc-PI de-N-acetylase LIS83_07910 PF13439 Glycosyltransferase Family 4 LIS83_07910 PF00534 Glycosyl transferases group 1 LIS83_07915 PF12627 Probable RNA and SrmB- binding site of polymerase A LIS83_07915 PF01743 Poly A polymerase head domain LIS83_07915 PF13735 tRNA nucleotidyltransferase domain 2 putative LIS83_07920 PF02237 Biotin protein ligase C terminal domain LIS83_07920 PF03099 Biotin/lipoate A/B protein ligase family LIS83_07920 PF08279 HTH domain LIS83_07930 PF02548 Ketopantoate hydroxymethyltransferase LIS83_07935 PF02569 Pantoate-beta-alanine ligase LIS83_07940 PF02261 Aspartate decarboxylase LIS83_07945 PF13307 Helicase C-terminal domain LIS83_07945 PF04851 Type III restriction enzyme, res subunit LIS83_07945 PF00929 Exonuclease LIS83_07950 PF14084 Protein of unknown function (DUF4264) LIS83_07960 PF00155 Aminotransferase class I and II LIS83_07965 PF07261 Replication initiation and membrane attachment LIS83_07970 PF10576 Iron-sulfur binding domain of endonuclease III LIS83_07970 PF00633 Helix-hairpin-helix motif LIS83_07970 PF00730 HhH-GPD superfamily base excision DNA repair protein LIS83_07980 PF00912 Transglycosylase LIS83_07980 PF00905 Penicillin binding protein transpeptidase domain LIS83_07985 PF03838 Recombination protein U LIS83_07990 PF10720 Protein of unknown function (DUF2515) LIS83_08025 PF06908 YspA SLOG family LIS83_08030 PF05103 DivIVA protein LIS83_08040 PF02926 THUMP domain LIS83_08040 PF01170 Putative RNA methylase family UPF0020 LIS83_08050 PF13307 Helicase C-terminal domain LIS83_08055 PF02074 Carboxypeptidase Taq (M32) metallopeptidase LIS83_08065 PF01636 Phosphotransferase enzyme family LIS83_08070 PF00557 Metallopeptidase family M24 LIS83_08075 PF00156 Phosphoribosyl transferase domain LIS83_08080 PF00860 Permease family LIS83_08085 PF04235 Protein of unknown function (DUF418) LIS83_08090 PF00350 Dynamin family LIS83_08100 PF00583 Acetyltransferase (GNAT) family LIS83_08105 PF10752 Protein of unknown function (DUF2533) LIS83_08110 PF00581 Rhodanese-like domain LIS83_08140 PF03738 Glutathionylspermidine synthase preATP-grasp LIS83_08150 PF00690 Cation transporter/ATPase, N-terminus LIS83_08150 PF00689 Cation transporting ATPase, C-terminus LIS83_08155 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LIS83_08155 PF01367 5'-3' exonuclease, C-terminal SAM fold LIS83_08170 PF13673 Acetyltransferase (GNAT) domain LIS83_08170 PF18014 Acetyltransferase (GNAT) domain LIS83_08190 PF13456 Reverse transcriptase-like LIS83_08195 PF01263 Aldose 1-epimerase LIS83_08220 PF00313 'Cold-shock' DNA-binding domain LIS83_08225 PF08892 YqcI/YcgG family LIS83_08230 PF01810 LysE type translocator LIS83_08245 PF04341 Protein of unknown function, DUF485 LIS83_08250 PF00474 Sodium:solute symporter family LIS83_08255 PF00202 Aminotransferase class-III LIS83_08265 PF00999 Sodium/hydrogen exchanger family LIS83_08270 PF00753 Metallo-beta-lactamase superfamily LIS83_08270 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LIS83_08270 PF17770 Ribonuclease J C-terminal domain LIS83_08275 PF06445 GyrI-like small molecule binding domain LIS83_08275 PF13411 MerR HTH family regulatory protein LIS83_08285 PF04239 Protein of unknown function (DUF421) LIS83_08290 PF02698 DUF218 domain LIS83_08300 PF00881 Nitroreductase family LIS83_08345 PF17209 Hfq protein LIS83_08355 PF01618 MotA/TolQ/ExbB proton channel family LIS83_08360 PF13677 Membrane MotB of proton-channel complex MotA/MotB LIS83_08360 PF00691 OmpA family LIS83_08365 PF00072 Response regulator receiver domain LIS83_08370 PF07194 P2 response regulator binding domain LIS83_08370 PF01627 Hpt domain LIS83_08370 PF02895 Signal transducing histidine kinase, homodimeric domain LIS83_08370 PF01584 CheW-like domain LIS83_08370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_08375 PF04509 CheC-like family LIS83_08375 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LIS83_08390 PF01739 CheR methyltransferase, SAM binding domain LIS83_08390 PF03705 CheR methyltransferase, all-alpha domain LIS83_08410 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LIS83_08410 PF00460 Flagella basal body rod protein LIS83_08415 PF00669 Bacterial flagellin N-terminal helical region LIS83_08415 PF00700 Bacterial flagellin C-terminal helical region LIS83_08420 PF07196 Flagellin hook IN motif LIS83_08420 PF07195 Flagellar hook-associated protein 2 C-terminus LIS83_08420 PF02465 Flagellar hook-associated protein 2 N-terminus LIS83_08435 PF00460 Flagella basal body rod protein LIS83_08440 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LIS83_08440 PF00460 Flagella basal body rod protein LIS83_08445 PF02049 Flagellar hook-basal body complex protein FliE LIS83_08450 PF08345 Flagellar M-ring protein C-terminal LIS83_08450 PF01514 Secretory protein of YscJ/FliF family LIS83_08455 PF14842 FliG N-terminal domain LIS83_08455 PF14841 FliG middle domain LIS83_08455 PF01706 FliG C-terminal domain LIS83_08465 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LIS83_08465 PF02874 ATP synthase alpha/beta family, beta-barrel domain LIS83_08465 PF18269 T3SS EscN ATPase C-terminal domain LIS83_08485 PF07559 Flagellar basal body protein FlaE LIS83_08485 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LIS83_08485 PF00460 Flagella basal body rod protein LIS83_08500 PF00072 Response regulator receiver domain LIS83_08500 PF01584 CheW-like domain LIS83_08505 PF12181 DNA binding domain of the motility gene repressor (MogR) LIS83_08510 PF00669 Bacterial flagellin N-terminal helical region LIS83_08510 PF00700 Bacterial flagellin C-terminal helical region LIS83_08515 PF00669 Bacterial flagellin N-terminal helical region LIS83_08515 PF00700 Bacterial flagellin C-terminal helical region LIS83_08520 PF01464 Transglycosylase SLT domain LIS83_08530 PF02154 Flagellar motor switch protein FliM LIS83_08530 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LIS83_08535 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LIS83_08535 PF04509 CheC-like family LIS83_08545 PF00813 FliP family LIS83_08550 PF01313 Bacterial export proteins, family 3 LIS83_08560 PF01312 FlhB HrpN YscU SpaS Family LIS83_08565 PF00771 FHIPEP family LIS83_08570 PF00448 SRP54-type protein, GTPase domain LIS83_08575 PF00460 Flagella basal body rod protein LIS83_08575 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LIS83_08580 PF02272 DHHA1 domain LIS83_08580 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LIS83_08580 PF01411 tRNA synthetases class II (A) LIS83_08605 PF00440 Bacterial regulatory proteins, tetR family LIS83_08605 PF08360 QacR-like protein, C-terminal region LIS83_08610 PF17329 Family of unknown function (DUF5367) LIS83_08635 PF03992 Antibiotic biosynthesis monooxygenase LIS83_08640 PF08141 Small acid-soluble spore protein H family LIS83_08660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIS83_08660 PF03466 LysR substrate binding domain LIS83_08665 PF08402 TOBE domain LIS83_08665 PF00005 ABC transporter LIS83_08675 PF00528 Binding-protein-dependent transport system inner membrane component LIS83_08680 PF00753 Metallo-beta-lactamase superfamily LIS83_08680 PF12706 Beta-lactamase superfamily domain LIS83_08690 PF10787 Uncharacterised protein from bacillus cereus group LIS83_08735 PF00768 D-alanyl-D-alanine carboxypeptidase LIS83_08735 PF07943 Penicillin-binding protein 5, C-terminal domain LIS83_08745 PF00300 Histidine phosphatase superfamily (branch 1) LIS83_08760 PF01047 MarR family LIS83_08770 PF13537 Glutamine amidotransferase domain LIS83_08770 PF00733 Asparagine synthase LIS83_08790 PF16916 Dimerisation domain of Zinc Transporter LIS83_08790 PF01545 Cation efflux family LIS83_08800 PF00392 Bacterial regulatory proteins, gntR family LIS83_08800 PF07729 FCD domain LIS83_08805 PF00892 EamA-like transporter family LIS83_08810 PF07683 Cobalamin synthesis protein cobW C-terminal domain LIS83_08810 PF02492 CobW/HypB/UreG, nucleotide-binding domain LIS83_08815 PF03773 Predicted permease LIS83_08830 PF03553 Na+/H+ antiporter family LIS83_08835 PF00206 Lyase LIS83_08835 PF10415 Fumarase C C-terminus LIS83_08850 PF01554 MatE LIS83_08855 PF03575 Peptidase family S51 LIS83_08875 PF02683 Cytochrome C biogenesis protein transmembrane region LIS83_08880 PF00578 AhpC/TSA family LIS83_08900 PF00291 Pyridoxal-phosphate dependent enzyme LIS83_08905 PF04286 Protein of unknown function (DUF445) LIS83_08930 PF00196 Bacterial regulatory proteins, luxR family LIS83_08930 PF00072 Response regulator receiver domain LIS83_08935 PF07730 Histidine kinase LIS83_08935 PF13185 GAF domain LIS83_08935 PF13492 GAF domain LIS83_08935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_08940 PF00005 ABC transporter LIS83_08955 PF13091 PLD-like domain LIS83_08960 PF00696 Amino acid kinase family LIS83_08965 PF00375 Sodium:dicarboxylate symporter family LIS83_08970 PF10415 Fumarase C C-terminus LIS83_08970 PF00206 Lyase LIS83_08975 PF00390 Malic enzyme, N-terminal domain LIS83_08975 PF03949 Malic enzyme, NAD binding domain LIS83_08980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_08985 PF00072 Response regulator receiver domain LIS83_08985 PF08664 YcbB domain LIS83_08990 PF00271 Helicase conserved C-terminal domain LIS83_08990 PF00176 SNF2 family N-terminal domain LIS83_08990 PF04434 SWIM zinc finger LIS83_09005 PF03590 Aspartate-ammonia ligase LIS83_09025 PF13840 ACT domain LIS83_09025 PF00696 Amino acid kinase family LIS83_09035 PF13761 Domain of unknown function (DUF4166) LIS83_09040 PF14158 YndJ-like protein LIS83_09045 PF00293 NUDIX domain LIS83_09050 PF00395 S-layer homology domain LIS83_09050 PF02368 Bacterial Ig-like domain (group 2) LIS83_09060 PF13302 Acetyltransferase (GNAT) domain LIS83_09085 PF02554 Carbon starvation protein CstA LIS83_09090 PF03976 Polyphosphate kinase 2 (PPK2) LIS83_09095 PF07690 Major Facilitator Superfamily LIS83_09100 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LIS83_09100 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LIS83_09110 PF01926 50S ribosome-binding GTPase LIS83_09110 PF13167 GTP-binding GTPase N-terminal LIS83_09110 PF16360 GTP-binding GTPase Middle Region LIS83_09115 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LIS83_09120 PF07690 Major Facilitator Superfamily LIS83_09125 PF00291 Pyridoxal-phosphate dependent enzyme LIS83_09140 PF01943 Polysaccharide biosynthesis protein LIS83_09140 PF14667 Polysaccharide biosynthesis C-terminal domain LIS83_09145 PF00209 Sodium:neurotransmitter symporter family LIS83_09150 PF01522 Polysaccharide deacetylase LIS83_09150 PF00457 Glycosyl hydrolases family 11 LIS83_09150 PF03422 Carbohydrate binding module (family 6) LIS83_09160 PF04239 Protein of unknown function (DUF421) LIS83_09175 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LIS83_09175 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LIS83_09190 PF01625 Peptide methionine sulfoxide reductase LIS83_09200 PF01063 Amino-transferase class IV LIS83_09205 PF00205 Thiamine pyrophosphate enzyme, central domain LIS83_09205 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LIS83_09205 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LIS83_09215 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LIS83_09215 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LIS83_09220 PF00920 Dehydratase family LIS83_09225 PF00585 C-terminal regulatory domain of Threonine dehydratase LIS83_09225 PF00291 Pyridoxal-phosphate dependent enzyme LIS83_09235 PF09587 Bacterial capsule synthesis protein PGA_cap LIS83_09250 PF07690 Major Facilitator Superfamily LIS83_09255 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LIS83_09270 PF00144 Beta-lactamase LIS83_09275 PF04397 LytTr DNA-binding domain LIS83_09275 PF00072 Response regulator receiver domain LIS83_09280 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain LIS83_09280 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain LIS83_09295 PF01979 Amidohydrolase family LIS83_09300 PF04740 LXG domain of WXG superfamily LIS83_09300 PF14436 Bacterial EndoU nuclease LIS83_09315 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LIS83_09340 PF13186 Iron-sulfur cluster-binding domain LIS83_09340 PF04055 Radical SAM superfamily LIS83_09345 PF13302 Acetyltransferase (GNAT) domain LIS83_09350 PF00072 Response regulator receiver domain LIS83_09350 PF00486 Transcriptional regulatory protein, C terminal LIS83_09355 PF00512 His Kinase A (phospho-acceptor) domain LIS83_09355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_09370 PF01566 Natural resistance-associated macrophage protein LIS83_09375 PF12368 Rhodanase C-terminal LIS83_09375 PF17773 UPF0176 acylphosphatase like domain LIS83_09375 PF00581 Rhodanese-like domain LIS83_09385 PF02558 Ketopantoate reductase PanE/ApbA LIS83_09385 PF08546 Ketopantoate reductase PanE/ApbA C terminal LIS83_09390 PF13520 Amino acid permease LIS83_09400 PF05791 Bacillus haemolytic enterotoxin (HBL) LIS83_09405 PF05791 Bacillus haemolytic enterotoxin (HBL) LIS83_09415 PF00005 ABC transporter LIS83_09435 PF00486 Transcriptional regulatory protein, C terminal LIS83_09435 PF00072 Response regulator receiver domain LIS83_09440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_09440 PF00512 His Kinase A (phospho-acceptor) domain LIS83_09445 PF04198 Putative sugar-binding domain LIS83_09450 PF01791 DeoC/LacD family aldolase LIS83_09455 PF01773 Na+ dependent nucleoside transporter N-terminus LIS83_09455 PF07662 Na+ dependent nucleoside transporter C-terminus LIS83_09460 PF02885 Glycosyl transferase family, helical bundle domain LIS83_09460 PF00591 Glycosyl transferase family, a/b domain LIS83_09460 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain LIS83_09465 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LIS83_09475 PF05979 Bacterial protein of unknown function (DUF896) LIS83_09490 PF05195 Aminopeptidase P, N-terminal domain LIS83_09490 PF00557 Metallopeptidase family M24 LIS83_09495 PF07732 Multicopper oxidase LIS83_09495 PF00394 Multicopper oxidase LIS83_09495 PF07731 Multicopper oxidase LIS83_09500 PF01551 Peptidase family M23 LIS83_09540 PF01648 4'-phosphopantetheinyl transferase superfamily LIS83_09545 PF00501 AMP-binding enzyme LIS83_09545 PF00668 Condensation domain LIS83_09545 PF13193 AMP-binding enzyme C-terminal domain LIS83_09545 PF00550 Phosphopantetheine attachment site LIS83_09550 PF00668 Condensation domain LIS83_09550 PF00501 AMP-binding enzyme LIS83_09550 PF00975 Thioesterase domain LIS83_09550 PF00550 Phosphopantetheine attachment site LIS83_09550 PF13193 AMP-binding enzyme C-terminal domain LIS83_09555 PF00975 Thioesterase domain LIS83_09555 PF13193 AMP-binding enzyme C-terminal domain LIS83_09555 PF00550 Phosphopantetheine attachment site LIS83_09555 PF00501 AMP-binding enzyme LIS83_09555 PF00668 Condensation domain LIS83_09560 PF00975 Thioesterase domain LIS83_09565 PF00202 Aminotransferase class-III LIS83_09570 PF00282 Pyridoxal-dependent decarboxylase conserved domain LIS83_09575 PF00589 Phage integrase family LIS83_09575 PF02899 Phage integrase, N-terminal SAM-like domain LIS83_09580 PF01131 DNA topoisomerase LIS83_09580 PF01751 Toprim domain LIS83_09585 PF00004 ATPase family associated with various cellular activities (AAA) LIS83_09630 PF02525 Flavodoxin-like fold LIS83_09635 PF05525 Branched-chain amino acid transport protein LIS83_09645 PF05425 Copper resistance protein D LIS83_09645 PF13115 YtkA-like LIS83_09645 PF04234 CopC domain LIS83_09650 PF07987 Domain of unkown function (DUF1775) LIS83_09660 PF00892 EamA-like transporter family LIS83_09665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIS83_09665 PF03466 LysR substrate binding domain LIS83_09670 PF02082 Transcriptional regulator LIS83_09675 PF01323 DSBA-like thioredoxin domain LIS83_09680 PF00881 Nitroreductase family LIS83_09685 PF01425 Amidase LIS83_09690 PF01594 AI-2E family transporter LIS83_09695 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LIS83_09695 PF00056 lactate/malate dehydrogenase, NAD binding domain LIS83_09700 PF01593 Flavin containing amine oxidoreductase LIS83_09705 PF02492 CobW/HypB/UreG, nucleotide-binding domain LIS83_09705 PF07683 Cobalamin synthesis protein cobW C-terminal domain LIS83_09720 PF13193 AMP-binding enzyme C-terminal domain LIS83_09720 PF00501 AMP-binding enzyme LIS83_09725 PF01575 MaoC like domain LIS83_09730 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LIS83_09730 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LIS83_09740 PF00005 ABC transporter LIS83_09740 PF12399 Branched-chain amino acid ATP-binding cassette transporter LIS83_09745 PF00005 ABC transporter LIS83_09750 PF02653 Branched-chain amino acid transport system / permease component LIS83_09760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIS83_09760 PF03466 LysR substrate binding domain LIS83_09770 PF14552 Tautomerase enzyme LIS83_09780 PF01047 MarR family LIS83_09790 PF01654 Cytochrome bd terminal oxidase subunit I LIS83_09795 PF02322 Cytochrome bd terminal oxidase subunit II LIS83_09800 PF00664 ABC transporter transmembrane region LIS83_09800 PF00005 ABC transporter LIS83_09805 PF00664 ABC transporter transmembrane region LIS83_09805 PF00005 ABC transporter LIS83_09825 PF00768 D-alanyl-D-alanine carboxypeptidase LIS83_09825 PF07943 Penicillin-binding protein 5, C-terminal domain LIS83_09840 PF01476 LysM domain LIS83_09840 PF00877 NlpC/P60 family LIS83_09850 PF00664 ABC transporter transmembrane region LIS83_09850 PF00005 ABC transporter LIS83_09855 PF00072 Response regulator receiver domain LIS83_09855 PF00486 Transcriptional regulatory protein, C terminal LIS83_09860 PF00512 His Kinase A (phospho-acceptor) domain LIS83_09860 PF00989 PAS fold LIS83_09860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_09860 PF16736 Single Cache-like LIS83_09870 PF00106 short chain dehydrogenase LIS83_09875 PF01596 O-methyltransferase LIS83_09880 PF04439 Streptomycin adenylyltransferase LIS83_09885 PF01522 Polysaccharide deacetylase LIS83_09905 PF03447 Homoserine dehydrogenase, NAD binding domain LIS83_09905 PF01842 ACT domain LIS83_09905 PF00742 Homoserine dehydrogenase LIS83_09910 PF00291 Pyridoxal-phosphate dependent enzyme LIS83_09915 PF08544 GHMP kinases C terminal LIS83_09915 PF00288 GHMP kinases N terminal domain LIS83_09930 PF03816 Cell envelope-related transcriptional attenuator domain LIS83_09940 PF00072 Response regulator receiver domain LIS83_09940 PF00486 Transcriptional regulatory protein, C terminal LIS83_09945 PF00989 PAS fold LIS83_09945 PF16736 Single Cache-like LIS83_09945 PF00512 His Kinase A (phospho-acceptor) domain LIS83_09945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_09950 PF01522 Polysaccharide deacetylase LIS83_09960 PF02308 MgtC family LIS83_09965 PF00583 Acetyltransferase (GNAT) family LIS83_09970 PF06276 Ferric iron reductase FhuF-like transporter LIS83_09970 PF04183 IucA / IucC family LIS83_09975 PF06276 Ferric iron reductase FhuF-like transporter LIS83_09975 PF04183 IucA / IucC family LIS83_09980 PF00501 AMP-binding enzyme LIS83_09980 PF13193 AMP-binding enzyme C-terminal domain LIS83_09995 PF01261 Xylose isomerase-like TIM barrel LIS83_10000 PF00269 Small, acid-soluble spore proteins, alpha/beta type LIS83_10005 PF07690 Major Facilitator Superfamily LIS83_10010 PF01810 LysE type translocator LIS83_10015 PF00392 Bacterial regulatory proteins, gntR family LIS83_10015 PF00155 Aminotransferase class I and II LIS83_10025 PF01734 Patatin-like phospholipase LIS83_10050 PF00293 NUDIX domain LIS83_10050 PF13344 Haloacid dehalogenase-like hydrolase LIS83_10055 PF02540 NAD synthase LIS83_10060 PF02687 FtsX-like permease family LIS83_10065 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LIS83_10065 PF18277 AbrB C-terminal domain LIS83_10070 PF00082 Subtilase family LIS83_10075 PF01022 Bacterial regulatory protein, arsR family LIS83_10080 PF00248 Aldo/keto reductase family LIS83_10085 PF07690 Major Facilitator Superfamily LIS83_10105 PF03193 RsgA GTPase LIS83_10110 PF02743 Cache domain LIS83_10110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LIS83_10110 PF00672 HAMP domain LIS83_10130 PF00210 Ferritin-like domain LIS83_10145 PF00296 Luciferase-like monooxygenase LIS83_10155 PF01593 Flavin containing amine oxidoreductase LIS83_10165 PF00248 Aldo/keto reductase family LIS83_10170 PF07683 Cobalamin synthesis protein cobW C-terminal domain LIS83_10170 PF02492 CobW/HypB/UreG, nucleotide-binding domain LIS83_10175 PF00583 Acetyltransferase (GNAT) family LIS83_10190 PF04740 LXG domain of WXG superfamily LIS83_10190 PF14436 Bacterial EndoU nuclease LIS83_10195 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment LIS83_10195 PF01297 Zinc-uptake complex component A periplasmic LIS83_10205 PF13460 NAD(P)H-binding LIS83_10210 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LIS83_10215 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LIS83_10215 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LIS83_10225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LIS83_10230 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LIS83_10240 PF00300 Histidine phosphatase superfamily (branch 1) LIS83_10250 PF08757 CotH kinase protein LIS83_10255 PF00293 NUDIX domain LIS83_10260 PF09335 SNARE associated Golgi protein LIS83_10265 PF14667 Polysaccharide biosynthesis C-terminal domain LIS83_10265 PF01943 Polysaccharide biosynthesis protein LIS83_10275 PF03773 Predicted permease LIS83_10280 PF09323 Domain of unknown function (DUF1980) LIS83_10285 PF03061 Thioesterase superfamily LIS83_10295 PF13091 PLD-like domain LIS83_10295 PF13396 Phospholipase_D-nuclease N-terminal LIS83_10310 PF13460 NAD(P)H-binding LIS83_10315 PF04306 Protein of unknown function (DUF456) LIS83_10320 PF03471 Transporter associated domain LIS83_10320 PF01595 Cyclin M transmembrane N-terminal domain LIS83_10320 PF00571 CBS domain LIS83_10335 PF05525 Branched-chain amino acid transport protein LIS83_10340 PF01588 Putative tRNA binding domain LIS83_10360 PF07454 Stage II sporulation protein P (SpoIIP) LIS83_10370 PF02557 D-alanyl-D-alanine carboxypeptidase LIS83_10380 PF01425 Amidase LIS83_10385 PF07690 Major Facilitator Superfamily LIS83_10395 PF01145 SPFH domain / Band 7 family LIS83_10400 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal LIS83_10400 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal LIS83_10410 PF06574 FAD synthetase LIS83_10415 PF06052 3-hydroxyanthranilic acid dioxygenase LIS83_10425 PF01042 Endoribonuclease L-PSP LIS83_10430 PF00171 Aldehyde dehydrogenase family LIS83_10435 PF01557 Fumarylacetoacetate (FAA) hydrolase family LIS83_10440 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation LIS83_10440 PF01118 Semialdehyde dehydrogenase, NAD binding domain LIS83_10445 PF07836 DmpG-like communication domain LIS83_10445 PF00682 HMGL-like LIS83_10455 PF01361 Tautomerase enzyme LIS83_10460 PF00300 Histidine phosphatase superfamily (branch 1) LIS83_10475 PF01168 Alanine racemase, N-terminal domain LIS83_10475 PF00842 Alanine racemase, C-terminal domain LIS83_10480 PF13847 Methyltransferase domain LIS83_10495 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase LIS83_10500 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LIS83_10500 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LIS83_10505 PF00392 Bacterial regulatory proteins, gntR family LIS83_10505 PF00155 Aminotransferase class I and II LIS83_10535 PF00583 Acetyltransferase (GNAT) family LIS83_10620 PF09579 Sporulation protein YtfJ (Spore_YtfJ) LIS83_10645 PF01209 ubiE/COQ5 methyltransferase family LIS83_10650 PF01268 Formate--tetrahydrofolate ligase LIS83_10660 PF00270 DEAD/DEAH box helicase LIS83_10660 PF00271 Helicase conserved C-terminal domain LIS83_10670 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LIS83_10680 PF00107 Zinc-binding dehydrogenase LIS83_10680 PF08240 Alcohol dehydrogenase GroES-like domain LIS83_10685 PF08281 Sigma-70, region 4 LIS83_10685 PF04542 Sigma-70 region 2 LIS83_10700 PF01613 Flavin reductase like domain LIS83_10700 PF00258 Flavodoxin LIS83_10710 PF00255 Glutathione peroxidase LIS83_10715 PF11992 Domain of unknown function (DUF3488) LIS83_10715 PF13559 Domain of unknown function (DUF4129) LIS83_10715 PF01841 Transglutaminase-like superfamily LIS83_10720 PF01882 Protein of unknown function DUF58 LIS83_10725 PF07726 ATPase family associated with various cellular activities (AAA) LIS83_10725 PF17863 AAA lid domain LIS83_10740 PF00384 Molybdopterin oxidoreductase LIS83_10740 PF14710 Respiratory nitrate reductase alpha N-terminal LIS83_10740 PF01568 Molydopterin dinucleotide binding domain LIS83_10745 PF13247 4Fe-4S dicluster domain LIS83_10745 PF14711 Respiratory nitrate reductase beta C-terminal LIS83_10750 PF02613 Nitrate reductase delta subunit LIS83_10755 PF02665 Nitrate reductase gamma subunit LIS83_10760 PF00027 Cyclic nucleotide-binding domain LIS83_10760 PF00325 Bacterial regulatory proteins, crp family LIS83_10765 PF06463 Molybdenum Cofactor Synthesis C LIS83_10765 PF04055 Radical SAM superfamily LIS83_10770 PF00899 ThiF family LIS83_10775 PF03453 MoeA N-terminal region (domain I and II) LIS83_10775 PF03454 MoeA C-terminal region (domain IV) LIS83_10775 PF00994 Probable molybdopterin binding domain LIS83_10780 PF02391 MoaE protein LIS83_10790 PF07690 Major Facilitator Superfamily LIS83_10805 PF01903 CbiX LIS83_10810 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LIS83_10815 PF00355 Rieske [2Fe-2S] domain LIS83_10820 PF04324 BFD-like [2Fe-2S] binding domain LIS83_10820 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LIS83_10820 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIS83_10820 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LIS83_10820 PF18267 Rubredoxin NAD+ reductase C-terminal domain LIS83_10825 PF01814 Hemerythrin HHE cation binding domain LIS83_10825 PF04405 Domain of Unknown function (DUF542) LIS83_10860 PF04232 Stage V sporulation protein S (SpoVS) LIS83_10900 PF18593 CdiI immunity protein LIS83_10915 PF01966 HD domain LIS83_10920 PF00005 ABC transporter LIS83_10920 PF12848 ABC transporter LIS83_10920 PF16326 ABC transporter C-terminal domain LIS83_10935 PF00436 Single-strand binding protein family LIS83_10945 PF01494 FAD binding domain LIS83_10950 PF08712 Scaffold protein Nfu/NifU N terminal LIS83_10950 PF13769 Virulence factor LIS83_10960 PF06491 Disulphide isomerase LIS83_10965 PF04445 Putative SAM-dependent methyltransferase LIS83_10970 PF03485 Arginyl tRNA synthetase N terminal domain LIS83_10970 PF05746 DALR anticodon binding domain LIS83_10970 PF00750 tRNA synthetases class I (R) LIS83_10990 PF08264 Anticodon-binding domain of tRNA LIS83_10990 PF00133 tRNA synthetases class I (I, L, M and V) LIS83_11010 PF00152 tRNA synthetases class II (D, K and N) LIS83_11010 PF01336 OB-fold nucleic acid binding domain LIS83_11030 PF12538 DNA transporter LIS83_11030 PF01580 FtsK/SpoIIIE family LIS83_11055 PF14449 Pre-toxin TG LIS83_11055 PF04740 LXG domain of WXG superfamily LIS83_11170 PF02595 Glycerate kinase family LIS83_11175 PF00939 Sodium:sulfate symporter transmembrane region LIS83_11180 PF00072 Response regulator receiver domain LIS83_11180 PF00486 Transcriptional regulatory protein, C terminal LIS83_11185 PF00672 HAMP domain LIS83_11185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_11185 PF00512 His Kinase A (phospho-acceptor) domain LIS83_11200 PF00209 Sodium:neurotransmitter symporter family LIS83_11215 PF10997 Alternate to MurJ LIS83_11220 PF13419 Haloacid dehalogenase-like hydrolase LIS83_11230 PF00465 Iron-containing alcohol dehydrogenase LIS83_11235 PF01177 Asp/Glu/Hydantoin racemase LIS83_11240 PF01980 tRNA-methyltransferase O LIS83_11245 PF00583 Acetyltransferase (GNAT) family LIS83_11260 PF00005 ABC transporter LIS83_11265 PF05975 Bacterial ABC transporter protein EcsB LIS83_11270 PF14005 YpjP-like protein LIS83_11275 PF13419 Haloacid dehalogenase-like hydrolase LIS83_11295 PF00144 Beta-lactamase LIS83_11295 PF07930 D-aminopeptidase, domain B LIS83_11300 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain LIS83_11300 PF08531 Alpha-L-rhamnosidase N-terminal domain LIS83_11300 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain LIS83_11300 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain LIS83_11305 PF00303 Thymidylate synthase LIS83_11310 PF00186 Dihydrofolate reductase LIS83_11315 PF00905 Penicillin binding protein transpeptidase domain LIS83_11315 PF05223 NTF2-like N-terminal transpeptidase domain LIS83_11315 PF03717 Penicillin-binding Protein dimerisation domain LIS83_11320 PF02525 Flavodoxin-like fold LIS83_11325 PF01553 Acyltransferase LIS83_11330 PF03006 Haemolysin-III related LIS83_11335 PF02416 mttA/Hcf106 family LIS83_11340 PF00902 Sec-independent protein translocase protein (TatC) LIS83_11350 PF02645 Uncharacterised protein, DegV family COG1307 LIS83_11360 PF02630 SCO1/SenC LIS83_11365 PF00011 Hsp20/alpha crystallin family LIS83_11370 PF13537 Glutamine amidotransferase domain LIS83_11370 PF00733 Asparagine synthase LIS83_11390 PF01497 Periplasmic binding protein LIS83_11395 PF01063 Amino-transferase class IV LIS83_11400 PF00881 Nitroreductase family LIS83_11415 PF00857 Isochorismatase family LIS83_11420 PF00293 NUDIX domain LIS83_11425 PF00011 Hsp20/alpha crystallin family LIS83_11430 PF00924 Mechanosensitive ion channel LIS83_11435 PF07730 Histidine kinase LIS83_11435 PF13185 GAF domain LIS83_11440 PF00072 Response regulator receiver domain LIS83_11440 PF00196 Bacterial regulatory proteins, luxR family LIS83_11450 PF08240 Alcohol dehydrogenase GroES-like domain LIS83_11450 PF00107 Zinc-binding dehydrogenase LIS83_11465 PF00144 Beta-lactamase LIS83_11475 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LIS83_11475 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LIS83_11480 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LIS83_11480 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LIS83_11495 PF03358 NADPH-dependent FMN reductase LIS83_11510 PF00005 ABC transporter LIS83_11510 PF00571 CBS domain LIS83_11515 PF00528 Binding-protein-dependent transport system inner membrane component LIS83_11520 PF13520 Amino acid permease LIS83_11550 PF01595 Cyclin M transmembrane N-terminal domain LIS83_11550 PF03471 Transporter associated domain LIS83_11550 PF00571 CBS domain LIS83_11555 PF00171 Aldehyde dehydrogenase family LIS83_11560 PF07997 Protein of unknown function (DUF1694) LIS83_11565 PF09385 Histidine kinase N terminal LIS83_11575 PF00202 Aminotransferase class-III LIS83_11580 PF01144 Coenzyme A transferase LIS83_11585 PF01144 Coenzyme A transferase LIS83_11590 PF01546 Peptidase family M20/M25/M40 LIS83_11590 PF07687 Peptidase dimerisation domain LIS83_11595 PF00583 Acetyltransferase (GNAT) family LIS83_11600 PF00158 Sigma-54 interaction domain LIS83_11600 PF13426 PAS domain LIS83_11600 PF02954 Bacterial regulatory protein, Fis family LIS83_11605 PF12544 Lysine-2,3-aminomutase LIS83_11610 PF14122 YokU-like protein, putative antitoxin LIS83_11615 PF06855 YozE SAM-like fold LIS83_11630 PF14162 YozD-like protein LIS83_11640 PF08239 Bacterial SH3 domain LIS83_11640 PF00069 Protein kinase domain LIS83_11645 PF07070 SpoOM protein LIS83_11650 PF01569 PAP2 superfamily LIS83_11655 PF16916 Dimerisation domain of Zinc Transporter LIS83_11655 PF01545 Cation efflux family LIS83_11660 PF00085 Thioredoxin LIS83_11745 PF10676 Spore germination protein gerPA/gerPF LIS83_11760 PF00106 short chain dehydrogenase LIS83_11780 PF00912 Transglycosylase LIS83_11780 PF00905 Penicillin binding protein transpeptidase domain LIS83_11790 PF07690 Major Facilitator Superfamily LIS83_11795 PF01521 Iron-sulphur cluster biosynthesis LIS83_11800 PF00285 Citrate synthase, C-terminal domain LIS83_11805 PF03972 MmgE/PrpD family LIS83_11815 PF02770 Acyl-CoA dehydrogenase, middle domain LIS83_11815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LIS83_11815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LIS83_11820 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LIS83_11820 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LIS83_11825 PF00171 Aldehyde dehydrogenase family LIS83_11830 PF01810 LysE type translocator LIS83_11835 PF00378 Enoyl-CoA hydratase/isomerase LIS83_11845 PF10763 Protein of unknown function (DUF2584) LIS83_11850 PF00149 Calcineurin-like phosphoesterase LIS83_11850 PF12320 Type 5 capsule protein repressor C-terminal domain LIS83_11855 PF13476 AAA domain LIS83_11865 PF01022 Bacterial regulatory protein, arsR family LIS83_11875 PF07690 Major Facilitator Superfamily LIS83_11880 PF00106 short chain dehydrogenase LIS83_11885 PF00425 chorismate binding enzyme LIS83_11890 PF00501 AMP-binding enzyme LIS83_11890 PF13193 AMP-binding enzyme C-terminal domain LIS83_11895 PF00857 Isochorismatase family LIS83_11895 PF00550 Phosphopantetheine attachment site LIS83_11900 PF00501 AMP-binding enzyme LIS83_11900 PF13193 AMP-binding enzyme C-terminal domain LIS83_11900 PF00668 Condensation domain LIS83_11900 PF00550 Phosphopantetheine attachment site LIS83_11900 PF00975 Thioesterase domain LIS83_11905 PF03621 MbtH-like protein LIS83_11910 PF07690 Major Facilitator Superfamily LIS83_11925 PF00216 Bacterial DNA-binding protein LIS83_11935 PF05163 DinB family LIS83_11940 PF00082 Subtilase family LIS83_11945 PF01235 Sodium:alanine symporter family LIS83_11960 PF16291 Domain of unknown function (DUF4937 LIS83_11965 PF00849 RNA pseudouridylate synthase LIS83_11965 PF01479 S4 domain LIS83_11970 PF02824 TGS domain LIS83_11970 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LIS83_11970 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LIS83_11970 PF03129 Anticodon binding domain LIS83_11980 PF00005 ABC transporter LIS83_11990 PF12146 Serine aminopeptidase, S33 LIS83_12015 PF13649 Methyltransferase domain LIS83_12060 PF00753 Metallo-beta-lactamase superfamily LIS83_12060 PF16123 Hydroxyacylglutathione hydrolase C-terminus LIS83_12070 PF03176 MMPL family LIS83_12080 PF00302 Chloramphenicol acetyltransferase LIS83_12095 PF00583 Acetyltransferase (GNAT) family LIS83_12125 PF01593 Flavin containing amine oxidoreductase LIS83_12135 PF08241 Methyltransferase domain LIS83_12140 PF13302 Acetyltransferase (GNAT) domain LIS83_12150 PF00313 'Cold-shock' DNA-binding domain LIS83_12175 PF03466 LysR substrate binding domain LIS83_12175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIS83_12180 PF02774 Semialdehyde dehydrogenase, dimerisation domain LIS83_12180 PF01118 Semialdehyde dehydrogenase, NAD binding domain LIS83_12195 PF03466 LysR substrate binding domain LIS83_12195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIS83_12200 PF03473 MOSC domain LIS83_12200 PF03475 3-alpha domain LIS83_12215 PF00005 ABC transporter LIS83_12215 PF00664 ABC transporter transmembrane region LIS83_12220 PF00664 ABC transporter transmembrane region LIS83_12220 PF00005 ABC transporter LIS83_12235 PF01810 LysE type translocator LIS83_12240 PF07883 Cupin domain LIS83_12240 PF01381 Helix-turn-helix LIS83_12270 PF13291 ACT domain LIS83_12270 PF04607 Region found in RelA / SpoT proteins LIS83_12270 PF02824 TGS domain LIS83_12280 PF00890 FAD binding domain LIS83_12285 PF08281 Sigma-70, region 4 LIS83_12285 PF04542 Sigma-70 region 2 LIS83_12285 PF12680 SnoaL-like domain LIS83_12310 PF02638 Glycosyl hydrolase-like 10 LIS83_12320 PF02378 Phosphotransferase system, EIIC LIS83_12330 PF03702 Anhydro-N-acetylmuramic acid kinase LIS83_12335 PF01869 BadF/BadG/BcrA/BcrD ATPase family LIS83_12340 PF02660 Glycerol-3-phosphate acyltransferase LIS83_12345 PF00266 Aminotransferase class-V LIS83_12350 PF00291 Pyridoxal-phosphate dependent enzyme LIS83_12380 PF16123 Hydroxyacylglutathione hydrolase C-terminus LIS83_12380 PF00753 Metallo-beta-lactamase superfamily LIS83_12395 PF00271 Helicase conserved C-terminal domain LIS83_12395 PF00270 DEAD/DEAH box helicase LIS83_12410 PF00440 Bacterial regulatory proteins, tetR family LIS83_12410 PF17932 Tetracyclin repressor-like, C-terminal domain LIS83_12425 PF00005 ABC transporter LIS83_12425 PF02687 FtsX-like permease family LIS83_12425 PF12704 MacB-like periplasmic core domain LIS83_12430 PF09313 Domain of unknown function (DUF1971) LIS83_12430 PF03848 Tellurite resistance protein TehB LIS83_12530 PF12802 MarR family LIS83_12535 PF00300 Histidine phosphatase superfamily (branch 1) LIS83_12540 PF14171 Toxin SpoIISA, type II toxin-antitoxin system LIS83_12565 PF07687 Peptidase dimerisation domain LIS83_12565 PF01546 Peptidase family M20/M25/M40 LIS83_12580 PF04542 Sigma-70 region 2 LIS83_12580 PF08281 Sigma-70, region 4 LIS83_12590 PF03717 Penicillin-binding Protein dimerisation domain LIS83_12590 PF00905 Penicillin binding protein transpeptidase domain LIS83_12595 PF03717 Penicillin-binding Protein dimerisation domain LIS83_12595 PF00905 Penicillin binding protein transpeptidase domain LIS83_12605 PF00149 Calcineurin-like phosphoesterase LIS83_12610 PF12323 Helix-turn-helix domain LIS83_12610 PF01385 Probable transposase LIS83_12610 PF07282 Putative transposase DNA-binding domain LIS83_12640 PF02770 Acyl-CoA dehydrogenase, middle domain LIS83_12640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LIS83_12640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LIS83_12645 PF02785 Biotin carboxylase C-terminal domain LIS83_12645 PF00289 Biotin carboxylase, N-terminal domain LIS83_12645 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LIS83_12650 PF00364 Biotin-requiring enzyme LIS83_12655 PF00682 HMGL-like LIS83_12660 PF00378 Enoyl-CoA hydratase/isomerase LIS83_12665 PF01039 Carboxyl transferase domain LIS83_12670 PF00501 AMP-binding enzyme LIS83_12670 PF16177 Acetyl-coenzyme A synthetase N-terminus LIS83_12670 PF13193 AMP-binding enzyme C-terminal domain LIS83_12680 PF00583 Acetyltransferase (GNAT) family LIS83_12685 PF00485 Phosphoribulokinase / Uridine kinase family LIS83_12695 PF05163 DinB family LIS83_12700 PF07943 Penicillin-binding protein 5, C-terminal domain LIS83_12700 PF00768 D-alanyl-D-alanine carboxypeptidase LIS83_12705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_12705 PF00512 His Kinase A (phospho-acceptor) domain LIS83_12710 PF00072 Response regulator receiver domain LIS83_12710 PF00486 Transcriptional regulatory protein, C terminal LIS83_12715 PF01966 HD domain LIS83_12720 PF13021 Domain of unknown function (DUF3885) LIS83_12725 PF01048 Phosphorylase superfamily LIS83_12745 PF01447 Thermolysin metallopeptidase, catalytic domain LIS83_12745 PF02868 Thermolysin metallopeptidase, alpha-helical domain LIS83_12745 PF07504 Fungalysin/Thermolysin Propeptide Motif LIS83_12745 PF03413 Peptidase propeptide and YPEB domain LIS83_12765 PF17760 UvrA interaction domain LIS83_12765 PF17755 UvrA DNA-binding domain LIS83_12765 PF17760 UvrA interaction domain LIS83_12765 PF17755 UvrA DNA-binding domain LIS83_12785 PF09278 MerR, DNA binding LIS83_12785 PF00376 MerR family regulatory protein LIS83_12790 PF07690 Major Facilitator Superfamily LIS83_12810 PF01636 Phosphotransferase enzyme family LIS83_12815 PF12833 Helix-turn-helix domain LIS83_12830 PF00392 Bacterial regulatory proteins, gntR family LIS83_12830 PF00155 Aminotransferase class I and II LIS83_12850 PF08240 Alcohol dehydrogenase GroES-like domain LIS83_12850 PF00107 Zinc-binding dehydrogenase LIS83_12870 PF08450 SMP-30/Gluconolactonase/LRE-like region LIS83_12880 PF01921 tRNA synthetases class I (K) LIS83_12885 PF07486 Cell Wall Hydrolase LIS83_12895 PF00486 Transcriptional regulatory protein, C terminal LIS83_12895 PF00072 Response regulator receiver domain LIS83_12900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_12910 PF12848 ABC transporter LIS83_12910 PF00005 ABC transporter LIS83_12925 PF00005 ABC transporter LIS83_12930 PF02687 FtsX-like permease family LIS83_12950 PF00742 Homoserine dehydrogenase LIS83_12950 PF03447 Homoserine dehydrogenase, NAD binding domain LIS83_12950 PF01842 ACT domain LIS83_12955 PF00155 Aminotransferase class I and II LIS83_12955 PF00392 Bacterial regulatory proteins, gntR family LIS83_12960 PF01820 D-ala D-ala ligase N-terminus LIS83_12960 PF07478 D-ala D-ala ligase C-terminus LIS83_12965 PF03070 TENA/THI-4/PQQC family LIS83_13040 PF00067 Cytochrome P450 LIS83_13050 PF00132 Bacterial transferase hexapeptide (six repeats) LIS83_13055 PF07561 Domain of Unknown Function (DUF1540) LIS83_13065 PF00067 Cytochrome P450 LIS83_13100 PF07690 Major Facilitator Superfamily LIS83_13110 PF13426 PAS domain LIS83_13110 PF00989 PAS fold LIS83_13110 PF13188 PAS domain LIS83_13110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_13110 PF00512 His Kinase A (phospho-acceptor) domain LIS83_13115 PF03717 Penicillin-binding Protein dimerisation domain LIS83_13115 PF00905 Penicillin binding protein transpeptidase domain LIS83_13120 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase LIS83_13125 PF01177 Asp/Glu/Hydantoin racemase LIS83_13130 PF07155 ECF-type riboflavin transporter, S component LIS83_13135 PF12558 ATP-binding cassette cobalt transporter LIS83_13135 PF00005 ABC transporter LIS83_13150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_13150 PF00512 His Kinase A (phospho-acceptor) domain LIS83_13160 PF04229 GrpB protein LIS83_13165 PF08240 Alcohol dehydrogenase GroES-like domain LIS83_13165 PF00107 Zinc-binding dehydrogenase LIS83_13170 PF01569 PAP2 superfamily LIS83_13175 PF03793 PASTA domain LIS83_13175 PF03717 Penicillin-binding Protein dimerisation domain LIS83_13175 PF00905 Penicillin binding protein transpeptidase domain LIS83_13180 PF08361 MAATS-type transcriptional repressor, C-terminal region LIS83_13180 PF00440 Bacterial regulatory proteins, tetR family LIS83_13195 PF11954 Domain of unknown function (DUF3471) LIS83_13195 PF00144 Beta-lactamase LIS83_13230 PF01965 DJ-1/PfpI family LIS83_13235 PF00144 Beta-lactamase LIS83_13250 PF01526 Tn3 transposase DDE domain LIS83_13250 PF13700 Domain of unknown function (DUF4158) LIS83_13255 PF02796 Helix-turn-helix domain of resolvase LIS83_13255 PF00239 Resolvase, N terminal domain LIS83_13260 PF00011 Hsp20/alpha crystallin family LIS83_13265 PF06445 GyrI-like small molecule binding domain LIS83_13265 PF12833 Helix-turn-helix domain LIS83_13275 PF03323 Bacillus/Clostridium GerA spore germination protein LIS83_13280 PF03845 Spore germination protein LIS83_13295 PF07690 Major Facilitator Superfamily LIS83_13310 PF03009 Glycerophosphoryl diester phosphodiesterase family LIS83_13330 PF00392 Bacterial regulatory proteins, gntR family LIS83_13330 PF00155 Aminotransferase class I and II LIS83_13335 PF00892 EamA-like transporter family LIS83_13350 PF00293 NUDIX domain LIS83_13350 PF13344 Haloacid dehalogenase-like hydrolase LIS83_13360 PF00144 Beta-lactamase LIS83_13370 PF07690 Major Facilitator Superfamily LIS83_13375 PF00293 NUDIX domain LIS83_13375 PF09297 NADH pyrophosphatase zinc ribbon domain LIS83_13380 PF02768 DNA polymerase III beta subunit, C-terminal domain LIS83_13380 PF00712 DNA polymerase III beta subunit, N-terminal domain LIS83_13380 PF02767 DNA polymerase III beta subunit, central domain LIS83_13385 PF00293 NUDIX domain LIS83_13395 PF12706 Beta-lactamase superfamily domain LIS83_13410 PF00300 Histidine phosphatase superfamily (branch 1) LIS83_13420 PF09234 Domain of unknown function (DUF1963) LIS83_13445 PF01734 Patatin-like phospholipase LIS83_13450 PF08000 Bacterial PH domain LIS83_13460 PF12867 DinB superfamily LIS83_13475 PF02673 Bacitracin resistance protein BacA LIS83_13485 PF01541 GIY-YIG catalytic domain LIS83_13520 PF01266 FAD dependent oxidoreductase LIS83_13545 PF13419 Haloacid dehalogenase-like hydrolase LIS83_13560 PF01569 PAP2 superfamily LIS83_13565 PF00128 Alpha amylase, catalytic domain LIS83_13565 PF03714 Bacterial pullanase-associated domain LIS83_13565 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LIS83_13570 PF02868 Thermolysin metallopeptidase, alpha-helical domain LIS83_13570 PF01447 Thermolysin metallopeptidase, catalytic domain LIS83_13570 PF03413 Peptidase propeptide and YPEB domain LIS83_13570 PF07504 Fungalysin/Thermolysin Propeptide Motif LIS83_13590 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LIS83_13595 PF00344 SecY translocase LIS83_13600 PF00308 Bacterial dnaA protein LIS83_13600 PF08299 Bacterial dnaA protein helix-turn-helix LIS83_13600 PF11638 DnaA N-terminal domain LIS83_13605 PF00892 EamA-like transporter family LIS83_13610 PF00392 Bacterial regulatory proteins, gntR family LIS83_13610 PF00155 Aminotransferase class I and II LIS83_13615 PF00561 alpha/beta hydrolase fold LIS83_13640 PF06081 Aromatic acid exporter family member 1 LIS83_13655 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) LIS83_13660 PF03413 Peptidase propeptide and YPEB domain LIS83_13660 PF14620 YpeB sporulation LIS83_13665 PF07486 Cell Wall Hydrolase LIS83_13665 PF01471 Putative peptidoglycan binding domain LIS83_13680 PF03301 Tryptophan 2,3-dioxygenase LIS83_13685 PF04199 Putative cyclase LIS83_13690 PF00266 Aminotransferase class-V LIS83_13695 PF08359 YsiA-like protein, C-terminal region LIS83_13695 PF00440 Bacterial regulatory proteins, tetR family LIS83_13700 PF00293 NUDIX domain LIS83_13700 PF13344 Haloacid dehalogenase-like hydrolase LIS83_13720 PF00158 Sigma-54 interaction domain LIS83_13720 PF01590 GAF domain LIS83_13720 PF02954 Bacterial regulatory protein, Fis family LIS83_13735 PF13302 Acetyltransferase (GNAT) domain LIS83_13740 PF00455 DeoR C terminal sensor domain LIS83_13740 PF08220 DeoR-like helix-turn-helix domain LIS83_13755 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LIS83_13755 PF00403 Heavy-metal-associated domain LIS83_13755 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIS83_13760 PF02082 Transcriptional regulator LIS83_13775 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LIS83_13775 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIS83_13780 PF00364 Biotin-requiring enzyme LIS83_13780 PF02817 e3 binding domain LIS83_13780 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LIS83_13785 PF02779 Transketolase, pyrimidine binding domain LIS83_13785 PF02780 Transketolase, C-terminal domain LIS83_13790 PF00676 Dehydrogenase E1 component LIS83_13800 PF00106 short chain dehydrogenase LIS83_13805 PF13673 Acetyltransferase (GNAT) domain LIS83_13805 PF04229 GrpB protein LIS83_13810 PF00485 Phosphoribulokinase / Uridine kinase family LIS83_13820 PF00293 NUDIX domain LIS83_13845 PF00528 Binding-protein-dependent transport system inner membrane component LIS83_13850 PF00005 ABC transporter LIS83_13850 PF00571 CBS domain LIS83_13855 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LIS83_13860 PF00574 Clp protease LIS83_13875 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LIS83_13880 PF13673 Acetyltransferase (GNAT) domain LIS83_13885 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LIS83_13885 PF18416 N-acetylglucosamine binding protein domain 2 LIS83_13890 PF01202 Shikimate kinase LIS83_13900 PF10990 Protein of unknown function (DUF2809) LIS83_13905 PF08241 Methyltransferase domain LIS83_13910 PF04237 YjbR LIS83_13915 PF13673 Acetyltransferase (GNAT) domain LIS83_13920 PF03772 Competence protein LIS83_13920 PF13567 Domain of unknown function (DUF4131) LIS83_13920 PF00753 Metallo-beta-lactamase superfamily LIS83_13970 PF13538 UvrD-like helicase C-terminal domain LIS83_13985 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like LIS83_13990 PF00271 Helicase conserved C-terminal domain LIS83_13990 PF00570 HRDC domain LIS83_13990 PF16124 RecQ zinc-binding LIS83_13990 PF09382 RQC domain LIS83_13990 PF00270 DEAD/DEAH box helicase LIS83_14035 PF01368 DHH family LIS83_14035 PF02833 DHHA2 domain LIS83_14040 PF18416 N-acetylglucosamine binding protein domain 2 LIS83_14040 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LIS83_14055 PF02627 Carboxymuconolactone decarboxylase family LIS83_14060 PF01235 Sodium:alanine symporter family LIS83_14065 PF00171 Aldehyde dehydrogenase family LIS83_14070 PF00701 Dihydrodipicolinate synthetase family LIS83_14075 PF05544 Proline racemase LIS83_14080 PF05544 Proline racemase LIS83_14085 PF01266 FAD dependent oxidoreductase LIS83_14090 PF13188 PAS domain LIS83_14090 PF02954 Bacterial regulatory protein, Fis family LIS83_14090 PF00158 Sigma-54 interaction domain LIS83_14095 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIS83_14095 PF04324 BFD-like [2Fe-2S] binding domain LIS83_14105 PF04324 BFD-like [2Fe-2S] binding domain LIS83_14105 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIS83_14120 PF08876 Domain of unknown function (DUF1836) LIS83_14125 PF09335 SNARE associated Golgi protein LIS83_14140 PF04914 DltD protein LIS83_14150 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LIS83_14155 PF00877 NlpC/P60 family LIS83_14155 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain LIS83_14160 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LIS83_14160 PF13378 Enolase C-terminal domain-like LIS83_14180 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LIS83_14205 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain LIS83_14205 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LIS83_14210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_14210 PF16736 Single Cache-like LIS83_14210 PF00989 PAS fold LIS83_14210 PF00512 His Kinase A (phospho-acceptor) domain LIS83_14215 PF00486 Transcriptional regulatory protein, C terminal LIS83_14215 PF00072 Response regulator receiver domain LIS83_14235 PF01048 Phosphorylase superfamily LIS83_14240 PF03808 Glycosyl transferase WecB/TagA/CpsF family LIS83_14245 PF01432 Peptidase family M3 LIS83_14245 PF08439 Oligopeptidase F LIS83_14250 PF13520 Amino acid permease LIS83_14255 PF01037 Lrp/AsnC ligand binding domain LIS83_14260 PF02645 Uncharacterised protein, DegV family COG1307 LIS83_14265 PF07552 Spore Coat Protein X and V domain LIS83_14295 PF07690 Major Facilitator Superfamily LIS83_14305 PF04519 Polymer-forming cytoskeletal LIS83_14310 PF13171 Protein of unknown function (DUF4004) LIS83_14315 PF12793 Sugar transport-related sRNA regulator N-term LIS83_14315 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LIS83_14320 PF07690 Major Facilitator Superfamily LIS83_14340 PF04226 Transglycosylase associated protein LIS83_14345 PF01156 Inosine-uridine preferring nucleoside hydrolase LIS83_14355 PF08241 Methyltransferase domain LIS83_14385 PF00155 Aminotransferase class I and II LIS83_14390 PF07977 FabA-like domain LIS83_14395 PF03630 Fumble LIS83_14415 PF00005 ABC transporter LIS83_14460 PF01594 AI-2E family transporter LIS83_14475 PF00296 Luciferase-like monooxygenase LIS83_14480 PF00528 Binding-protein-dependent transport system inner membrane component LIS83_14485 PF09084 NMT1/THI5 like LIS83_14490 PF00005 ABC transporter LIS83_14500 PF09297 NADH pyrophosphatase zinc ribbon domain LIS83_14500 PF00293 NUDIX domain LIS83_14520 PF02522 Aminoglycoside 3-N-acetyltransferase LIS83_14545 PF13536 Putative multidrug resistance efflux transporter LIS83_14550 PF12867 DinB superfamily LIS83_14580 PF01522 Polysaccharide deacetylase LIS83_14590 PF03741 Integral membrane protein TerC family LIS83_14595 PF00884 Sulfatase LIS83_14600 PF12848 ABC transporter LIS83_14600 PF00005 ABC transporter LIS83_14610 PF03176 MMPL family LIS83_14615 PF16295 Tetracyclin repressor-like, C-terminal domain LIS83_14615 PF00440 Bacterial regulatory proteins, tetR family LIS83_14625 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LIS83_14630 PF01842 ACT domain LIS83_14630 PF02153 Prephenate dehydrogenase LIS83_14635 PF00155 Aminotransferase class I and II LIS83_14640 PF01264 Chorismate synthase LIS83_14645 PF00793 DAHP synthetase I family LIS83_14645 PF01817 Chorismate mutase type II LIS83_14665 PF01636 Phosphotransferase enzyme family LIS83_14680 PF06725 3D domain LIS83_14680 PF01476 LysM domain LIS83_14695 PF00378 Enoyl-CoA hydratase/isomerase LIS83_14700 PF00501 AMP-binding enzyme LIS83_14700 PF13193 AMP-binding enzyme C-terminal domain LIS83_14705 PF02954 Bacterial regulatory protein, Fis family LIS83_14705 PF00989 PAS fold LIS83_14705 PF00158 Sigma-54 interaction domain LIS83_14715 PF06039 Malate:quinone oxidoreductase (Mqo) LIS83_14720 PF13407 Periplasmic binding protein domain LIS83_14725 PF02653 Branched-chain amino acid transport system / permease component LIS83_14730 PF02653 Branched-chain amino acid transport system / permease component LIS83_14735 PF00005 ABC transporter LIS83_14740 PF04198 Putative sugar-binding domain LIS83_14740 PF00325 Bacterial regulatory proteins, crp family LIS83_14745 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LIS83_14745 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LIS83_14755 PF01791 DeoC/LacD family aldolase LIS83_14780 PF03992 Antibiotic biosynthesis monooxygenase LIS83_14800 PF07662 Na+ dependent nucleoside transporter C-terminus LIS83_14800 PF01773 Na+ dependent nucleoside transporter N-terminus LIS83_14805 PF00171 Aldehyde dehydrogenase family LIS83_14810 PF00696 Amino acid kinase family LIS83_14810 PF01472 PUA domain LIS83_14815 PF14748 Pyrroline-5-carboxylate reductase dimerisation LIS83_14815 PF03807 NADP oxidoreductase coenzyme F420-dependent LIS83_14820 PF01546 Peptidase family M20/M25/M40 LIS83_14825 PF09339 IclR helix-turn-helix domain LIS83_14825 PF01614 Bacterial transcriptional regulator LIS83_14830 PF00324 Amino acid permease LIS83_14835 PF01139 tRNA-splicing ligase RtcB LIS83_14840 PF00487 Fatty acid desaturase LIS83_14845 PF00245 Alkaline phosphatase LIS83_14850 PF11188 Protein of unknown function (DUF2975) LIS83_14855 PF13443 Cro/C1-type HTH DNA-binding domain LIS83_14870 PF10086 YhfC intramembrane metalloprotease LIS83_14880 PF04397 LytTr DNA-binding domain LIS83_14880 PF00072 Response regulator receiver domain LIS83_14905 PF13302 Acetyltransferase (GNAT) domain LIS83_14910 PF12681 Glyoxalase-like domain LIS83_14935 PF07726 ATPase family associated with various cellular activities (AAA) LIS83_14935 PF17863 AAA lid domain LIS83_14950 PF07690 Major Facilitator Superfamily LIS83_14975 PF00535 Glycosyl transferase family 2 LIS83_14980 PF00535 Glycosyl transferase family 2 LIS83_14990 PF00202 Aminotransferase class-III LIS83_14995 PF00199 Catalase LIS83_14995 PF06628 Catalase-related immune-responsive LIS83_15005 PF13382 Adenine deaminase C-terminal domain LIS83_15005 PF01979 Amidohydrolase family LIS83_15010 PF00144 Beta-lactamase LIS83_15035 PF00881 Nitroreductase family LIS83_15040 PF01047 MarR family LIS83_15045 PF14492 Elongation Factor G, domain II LIS83_15045 PF03764 Elongation factor G, domain IV LIS83_15045 PF00009 Elongation factor Tu GTP binding domain LIS83_15045 PF00679 Elongation factor G C-terminus LIS83_15055 PF00293 NUDIX domain LIS83_15070 PF00005 ABC transporter LIS83_15075 PF00392 Bacterial regulatory proteins, gntR family LIS83_15090 PF00005 ABC transporter LIS83_15090 PF02687 FtsX-like permease family LIS83_15090 PF12704 MacB-like periplasmic core domain LIS83_15115 PF12833 Helix-turn-helix domain LIS83_15120 PF00583 Acetyltransferase (GNAT) family LIS83_15135 PF00892 EamA-like transporter family LIS83_15140 PF00155 Aminotransferase class I and II LIS83_15140 PF00392 Bacterial regulatory proteins, gntR family LIS83_15150 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LIS83_15155 PF13031 Protein of unknown function (DUF3892) LIS83_15165 PF00512 His Kinase A (phospho-acceptor) domain LIS83_15165 PF00672 HAMP domain LIS83_15170 PF00072 Response regulator receiver domain LIS83_15170 PF00486 Transcriptional regulatory protein, C terminal LIS83_15175 PF00561 alpha/beta hydrolase fold LIS83_15205 PF01925 Sulfite exporter TauE/SafE LIS83_15215 PF00324 Amino acid permease LIS83_15225 PF08713 DNA alkylation repair enzyme LIS83_15240 PF00293 NUDIX domain LIS83_15245 PF04989 Cephalosporin hydroxylase LIS83_15250 PF10502 Signal peptidase, peptidase S26 LIS83_15255 PF00905 Penicillin binding protein transpeptidase domain LIS83_15255 PF03717 Penicillin-binding Protein dimerisation domain LIS83_15260 PF02146 Sir2 family LIS83_15265 PF01470 Pyroglutamyl peptidase LIS83_15285 PF03746 LamB/YcsF family LIS83_15290 PF02626 Carboxyltransferase domain, subdomain A and B LIS83_15295 PF02682 Carboxyltransferase domain, subdomain C and D LIS83_15300 PF09339 IclR helix-turn-helix domain LIS83_15300 PF01614 Bacterial transcriptional regulator LIS83_15305 PF10502 Signal peptidase, peptidase S26 LIS83_15310 PF03932 CutC family LIS83_15315 PF07454 Stage II sporulation protein P (SpoIIP) LIS83_15330 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LIS83_15330 PF02770 Acyl-CoA dehydrogenase, middle domain LIS83_15330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LIS83_15345 PF07670 Nucleoside recognition LIS83_15365 PF00440 Bacterial regulatory proteins, tetR family LIS83_15370 PF00391 PEP-utilising enzyme, mobile domain LIS83_15370 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LIS83_15375 PF00753 Metallo-beta-lactamase superfamily LIS83_15390 PF07875 Coat F domain LIS83_15395 PF08892 YqcI/YcgG family LIS83_15400 PF01810 LysE type translocator LIS83_15405 PF00324 Amino acid permease LIS83_15415 PF00269 Small, acid-soluble spore proteins, alpha/beta type LIS83_15420 PF10710 Protein of unknown function (DUF2512) LIS83_15425 PF11553 Protein of unknown function (DUF3231) LIS83_15430 PF00269 Small, acid-soluble spore proteins, alpha/beta type LIS83_15435 PF13823 Alcohol dehydrogenase GroES-associated LIS83_15435 PF00107 Zinc-binding dehydrogenase LIS83_15435 PF08240 Alcohol dehydrogenase GroES-like domain LIS83_15450 PF11798 IMS family HHH motif LIS83_15450 PF00817 impB/mucB/samB family LIS83_15450 PF11799 impB/mucB/samB family C-terminal domain LIS83_15460 PF00144 Beta-lactamase LIS83_15465 PF00149 Calcineurin-like phosphoesterase LIS83_15465 PF17936 Bacterial Ig domain LIS83_15465 PF02872 5'-nucleotidase, C-terminal domain LIS83_15470 PF03992 Antibiotic biosynthesis monooxygenase LIS83_15480 PF01544 CorA-like Mg2+ transporter protein LIS83_15495 PF11181 Heat induced stress protein YflT LIS83_15510 PF08240 Alcohol dehydrogenase GroES-like domain LIS83_15510 PF00107 Zinc-binding dehydrogenase LIS83_15520 PF00067 Cytochrome P450 LIS83_15525 PF17922 Tetracyclin repressor-like, C-terminal domain LIS83_15525 PF00440 Bacterial regulatory proteins, tetR family LIS83_15530 PF07859 alpha/beta hydrolase fold LIS83_15535 PF07859 alpha/beta hydrolase fold LIS83_15545 PF03073 TspO/MBR family LIS83_15570 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) LIS83_15575 PF00361 Proton-conducting membrane transporter LIS83_15575 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LIS83_15580 PF10057 Uncharacterized conserved protein (DUF2294) LIS83_15595 PF17863 AAA lid domain LIS83_15595 PF07726 ATPase family associated with various cellular activities (AAA) LIS83_15605 PF01040 UbiA prenyltransferase family LIS83_15610 PF00561 alpha/beta hydrolase fold LIS83_15615 PF01297 Zinc-uptake complex component A periplasmic LIS83_15620 PF00950 ABC 3 transport family LIS83_15625 PF00005 ABC transporter LIS83_15650 PF01451 Low molecular weight phosphotyrosine protein phosphatase LIS83_15655 PF01758 Sodium Bile acid symporter family LIS83_15660 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LIS83_15665 PF01022 Bacterial regulatory protein, arsR family LIS83_15680 PF00012 Hsp70 protein LIS83_15685 PF07690 Major Facilitator Superfamily LIS83_15700 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LIS83_15710 PF00144 Beta-lactamase LIS83_15730 PF12802 MarR family LIS83_15735 PF00067 Cytochrome P450 LIS83_15735 PF00175 Oxidoreductase NAD-binding domain LIS83_15735 PF00258 Flavodoxin LIS83_15735 PF00667 FAD binding domain LIS83_15740 PF07690 Major Facilitator Superfamily LIS83_15765 PF00486 Transcriptional regulatory protein, C terminal LIS83_15765 PF00072 Response regulator receiver domain LIS83_15770 PF00512 His Kinase A (phospho-acceptor) domain LIS83_15770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_15770 PF00672 HAMP domain LIS83_15795 PF00291 Pyridoxal-phosphate dependent enzyme LIS83_15805 PF00144 Beta-lactamase LIS83_15820 PF00753 Metallo-beta-lactamase superfamily LIS83_15825 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family LIS83_15835 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LIS83_15835 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LIS83_15850 PF02073 Thermophilic metalloprotease (M29) LIS83_15860 PF13411 MerR HTH family regulatory protein LIS83_15865 PF04072 Leucine carboxyl methyltransferase LIS83_15880 PF00005 ABC transporter LIS83_15885 PF02687 FtsX-like permease family LIS83_15900 PF00672 HAMP domain LIS83_15900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_15900 PF00512 His Kinase A (phospho-acceptor) domain LIS83_15905 PF00072 Response regulator receiver domain LIS83_15905 PF00486 Transcriptional regulatory protein, C terminal LIS83_15915 PF01047 MarR family LIS83_15920 PF00583 Acetyltransferase (GNAT) family LIS83_15925 PF04299 Putative FMN-binding domain LIS83_15930 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LIS83_15930 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LIS83_15935 PF07690 Major Facilitator Superfamily LIS83_15940 PF02589 LUD domain LIS83_15945 PF02589 LUD domain LIS83_15945 PF13183 4Fe-4S dicluster domain LIS83_15945 PF11870 Domain of unknown function (DUF3390) LIS83_15950 PF02754 Cysteine-rich domain LIS83_15955 PF03466 LysR substrate binding domain LIS83_15955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIS83_15975 PF17676 LD-carboxypeptidase C-terminal domain LIS83_15975 PF02016 LD-carboxypeptidase N-terminal domain LIS83_15990 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LIS83_15990 PF01842 ACT domain LIS83_15990 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LIS83_15995 PF00266 Aminotransferase class-V LIS83_16010 PF08281 Sigma-70, region 4 LIS83_16010 PF04542 Sigma-70 region 2 LIS83_16025 PF07883 Cupin domain LIS83_16030 PF01497 Periplasmic binding protein LIS83_16030 PF12833 Helix-turn-helix domain LIS83_16045 PF04740 LXG domain of WXG superfamily LIS83_16045 PF14436 Bacterial EndoU nuclease LIS83_16050 PF01804 Penicillin amidase LIS83_16060 PF01510 N-acetylmuramoyl-L-alanine amidase LIS83_16060 PF01476 LysM domain LIS83_16060 PF01471 Putative peptidoglycan binding domain LIS83_16070 PF08361 MAATS-type transcriptional repressor, C-terminal region LIS83_16070 PF00440 Bacterial regulatory proteins, tetR family LIS83_16075 PF07690 Major Facilitator Superfamily LIS83_16110 PF14044 NETI protein LIS83_16115 PF07690 Major Facilitator Superfamily LIS83_16120 PF12697 Alpha/beta hydrolase family LIS83_16125 PF01047 MarR family LIS83_16130 PF07690 Major Facilitator Superfamily LIS83_16140 PF12679 ABC-2 family transporter protein LIS83_16145 PF00005 ABC transporter LIS83_16145 PF13732 Domain of unknown function (DUF4162) LIS83_16150 PF13396 Phospholipase_D-nuclease N-terminal LIS83_16160 PF17314 Family of unknown function (DUF5360) LIS83_16165 PF00893 Small Multidrug Resistance protein LIS83_16170 PF00440 Bacterial regulatory proteins, tetR family LIS83_16180 PF17440 Thiol-activated cytolysin beta sandwich domain LIS83_16180 PF01289 Thiol-activated cytolysin LIS83_16185 PF02667 Short chain fatty acid transporter LIS83_16195 PF02525 Flavodoxin-like fold LIS83_16215 PF14256 YwiC-like protein LIS83_16225 PF00005 ABC transporter LIS83_16230 PF02361 Cobalt transport protein LIS83_16245 PF03737 Aldolase/RraA LIS83_16250 PF03606 C4-dicarboxylate anaerobic carrier LIS83_16255 PF04231 Endonuclease I LIS83_16260 PF04073 Aminoacyl-tRNA editing domain LIS83_16265 PF00144 Beta-lactamase LIS83_16270 PF00072 Response regulator receiver domain LIS83_16270 PF00196 Bacterial regulatory proteins, luxR family LIS83_16275 PF03129 Anticodon binding domain LIS83_16275 PF13393 Histidyl-tRNA synthetase LIS83_16290 PF01638 HxlR-like helix-turn-helix LIS83_16295 PF00881 Nitroreductase family LIS83_16305 PF00391 PEP-utilising enzyme, mobile domain LIS83_16305 PF02887 Pyruvate kinase, alpha/beta domain LIS83_16305 PF00224 Pyruvate kinase, barrel domain LIS83_16335 PF00005 ABC transporter LIS83_16375 PF13419 Haloacid dehalogenase-like hydrolase LIS83_16380 PF01385 Probable transposase LIS83_16380 PF07282 Putative transposase DNA-binding domain LIS83_16380 PF12323 Helix-turn-helix domain LIS83_16395 PF13350 Tyrosine phosphatase family LIS83_16415 PF00293 NUDIX domain LIS83_16415 PF13344 Haloacid dehalogenase-like hydrolase LIS83_16420 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LIS83_16425 PF00480 ROK family LIS83_16430 PF12464 Maltose acetyltransferase LIS83_16430 PF14602 Hexapeptide repeat of succinyl-transferase LIS83_16440 PF00005 ABC transporter LIS83_16440 PF12704 MacB-like periplasmic core domain LIS83_16440 PF02687 FtsX-like permease family LIS83_16450 PF00579 tRNA synthetases class I (W and Y) LIS83_16460 PF01594 AI-2E family transporter LIS83_16480 PF08241 Methyltransferase domain LIS83_16490 PF07690 Major Facilitator Superfamily LIS83_16510 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LIS83_16520 PF03471 Transporter associated domain LIS83_16520 PF00571 CBS domain LIS83_16520 PF01595 Cyclin M transmembrane N-terminal domain LIS83_16525 PF13411 MerR HTH family regulatory protein LIS83_16530 PF00892 EamA-like transporter family LIS83_16535 PF00805 Pentapeptide repeats (8 copies) LIS83_16540 PF06906 Protein of unknown function (DUF1272) LIS83_16545 PF10282 Lactonase, 7-bladed beta-propeller LIS83_16550 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LIS83_16550 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LIS83_16555 PF02447 GntP family permease LIS83_16560 PF00923 Transaldolase/Fructose-6-phosphate aldolase LIS83_16565 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LIS83_16565 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LIS83_16570 PF02780 Transketolase, C-terminal domain LIS83_16570 PF00456 Transketolase, thiamine diphosphate binding domain LIS83_16570 PF02779 Transketolase, pyrimidine binding domain LIS83_16575 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LIS83_16575 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LIS83_16595 PF02801 Beta-ketoacyl synthase, C-terminal domain LIS83_16595 PF14765 Polyketide synthase dehydratase LIS83_16595 PF00698 Acyl transferase domain LIS83_16595 PF00107 Zinc-binding dehydrogenase LIS83_16595 PF08240 Alcohol dehydrogenase GroES-like domain LIS83_16595 PF00550 Phosphopantetheine attachment site LIS83_16595 PF16197 Ketoacyl-synthetase C-terminal extension LIS83_16595 PF08659 KR domain LIS83_16595 PF00109 Beta-ketoacyl synthase, N-terminal domain LIS83_16605 PF03928 Haem-degrading LIS83_16640 PF03960 ArsC family LIS83_16650 PF00392 Bacterial regulatory proteins, gntR family LIS83_16650 PF07702 UTRA domain LIS83_16655 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIS83_16655 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIS83_16690 PF02567 Phenazine biosynthesis-like protein LIS83_16705 PF00501 AMP-binding enzyme LIS83_16705 PF13193 AMP-binding enzyme C-terminal domain LIS83_16710 PF02525 Flavodoxin-like fold LIS83_16715 PF01638 HxlR-like helix-turn-helix LIS83_16720 PF01022 Bacterial regulatory protein, arsR family LIS83_16725 PF01522 Polysaccharide deacetylase LIS83_16730 PF12791 Anti-sigma factor N-terminus LIS83_16735 PF04542 Sigma-70 region 2 LIS83_16745 PF02517 CPBP intramembrane metalloprotease LIS83_16750 PF00440 Bacterial regulatory proteins, tetR family LIS83_16770 PF01061 ABC-2 type transporter LIS83_16775 PF00005 ABC transporter LIS83_16775 PF13732 Domain of unknown function (DUF4162) LIS83_16790 PF03063 Prismane/CO dehydrogenase family LIS83_16795 PF07282 Putative transposase DNA-binding domain LIS83_16795 PF01385 Probable transposase LIS83_16795 PF12323 Helix-turn-helix domain LIS83_16805 PF00753 Metallo-beta-lactamase superfamily LIS83_16810 PF01183 Glycosyl hydrolases family 25 LIS83_16810 PF01471 Putative peptidoglycan binding domain LIS83_16835 PF00144 Beta-lactamase LIS83_16885 PF00107 Zinc-binding dehydrogenase LIS83_16885 PF08240 Alcohol dehydrogenase GroES-like domain LIS83_16890 PF00324 Amino acid permease LIS83_16895 PF07690 Major Facilitator Superfamily LIS83_16915 PF02585 GlcNAc-PI de-N-acetylase LIS83_16920 PF08830 Protein of unknown function (DUF1806) LIS83_16925 PF03600 Citrate transporter LIS83_16940 PF01497 Periplasmic binding protein LIS83_16945 PF01032 FecCD transport family LIS83_16950 PF01032 FecCD transport family LIS83_16955 PF05675 Protein of unknown function (DUF817) LIS83_16960 PF02567 Phenazine biosynthesis-like protein LIS83_16980 PF03466 LysR substrate binding domain LIS83_16980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIS83_16985 PF08240 Alcohol dehydrogenase GroES-like domain LIS83_16985 PF00107 Zinc-binding dehydrogenase LIS83_17000 PF01713 Smr domain LIS83_17000 PF00488 MutS domain V LIS83_17015 PF00128 Alpha amylase, catalytic domain LIS83_17015 PF09154 Domain of unknown function (DUF1939) LIS83_17020 PF00797 N-acetyltransferase LIS83_17025 PF08439 Oligopeptidase F LIS83_17025 PF01432 Peptidase family M3 LIS83_17030 PF00144 Beta-lactamase LIS83_17040 PF07690 Major Facilitator Superfamily LIS83_17045 PF03466 LysR substrate binding domain LIS83_17045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIS83_17060 PF03009 Glycerophosphoryl diester phosphodiesterase family LIS83_17080 PF01494 FAD binding domain LIS83_17085 PF01022 Bacterial regulatory protein, arsR family LIS83_17090 PF00107 Zinc-binding dehydrogenase LIS83_17090 PF08240 Alcohol dehydrogenase GroES-like domain LIS83_17095 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LIS83_17100 PF18801 response regulator aspartate phosphatase H, N terminal LIS83_17110 PF04299 Putative FMN-binding domain LIS83_17125 PF01758 Sodium Bile acid symporter family LIS83_17130 PF02913 FAD linked oxidases, C-terminal domain LIS83_17130 PF01565 FAD binding domain LIS83_17150 PF00132 Bacterial transferase hexapeptide (six repeats) LIS83_17155 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LIS83_17160 PF00535 Glycosyl transferase family 2 LIS83_17165 PF00378 Enoyl-CoA hydratase/isomerase LIS83_17170 PF08453 Peptidase family M9 N-terminal LIS83_17170 PF18496 Collagenase G catalytic helper subdomain LIS83_17170 PF01752 Collagenase LIS83_17175 PF02308 MgtC family LIS83_17190 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LIS83_17195 PF04294 VanW like protein LIS83_17205 PF13037 Domain of unknown function (DUF3898) LIS83_17205 PF13039 Protein of unknown function (DUF3900) LIS83_17220 PF00313 'Cold-shock' DNA-binding domain LIS83_17230 PF00258 Flavodoxin LIS83_17240 PF00293 NUDIX domain LIS83_17250 PF00132 Bacterial transferase hexapeptide (six repeats) LIS83_17260 PF00106 short chain dehydrogenase LIS83_17270 PF14698 Argininosuccinate lyase C-terminal LIS83_17270 PF00206 Lyase LIS83_17280 PF01156 Inosine-uridine preferring nucleoside hydrolase LIS83_17285 PF00474 Sodium:solute symporter family LIS83_17295 PF00171 Aldehyde dehydrogenase family LIS83_17305 PF14151 YfhD-like protein LIS83_17310 PF13249 Squalene-hopene cyclase N-terminal domain LIS83_17310 PF13243 Squalene-hopene cyclase C-terminal domain LIS83_17315 PF02681 Divergent PAP2 family LIS83_17320 PF00892 EamA-like transporter family LIS83_17325 PF06961 Protein of unknown function (DUF1294) LIS83_17340 PF10609 NUBPL iron-transfer P-loop NTPase LIS83_17350 PF02391 MoaE protein LIS83_17355 PF03453 MoeA N-terminal region (domain I and II) LIS83_17355 PF03454 MoeA C-terminal region (domain IV) LIS83_17355 PF00994 Probable molybdopterin binding domain LIS83_17360 PF00899 ThiF family LIS83_17365 PF01226 Formate/nitrite transporter LIS83_17370 PF04055 Radical SAM superfamily LIS83_17370 PF06463 Molybdenum Cofactor Synthesis C LIS83_17375 PF02634 FdhD/NarQ family LIS83_17380 PF10057 Uncharacterized conserved protein (DUF2294) LIS83_17385 PF07849 Protein of unknown function (DUF1641) LIS83_17390 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LIS83_17390 PF00384 Molybdopterin oxidoreductase LIS83_17390 PF01568 Molydopterin dinucleotide binding domain LIS83_17390 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LIS83_17390 PF00037 4Fe-4S binding domain LIS83_17395 PF03323 Bacillus/Clostridium GerA spore germination protein LIS83_17435 PF08241 Methyltransferase domain LIS83_17440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LIS83_17450 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LIS83_17455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LIS83_17460 PF00375 Sodium:dicarboxylate symporter family LIS83_17465 PF03816 Cell envelope-related transcriptional attenuator domain LIS83_17475 PF08281 Sigma-70, region 4 LIS83_17475 PF04542 Sigma-70 region 2 LIS83_17495 PF00005 ABC transporter LIS83_17495 PF13732 Domain of unknown function (DUF4162) LIS83_17505 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIS83_17505 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIS83_17510 PF03989 DNA gyrase C-terminal domain, beta-propeller LIS83_17510 PF00521 DNA gyrase/topoisomerase IV, subunit A LIS83_17515 PF00204 DNA gyrase B LIS83_17515 PF00986 DNA gyrase B subunit, carboxyl terminus LIS83_17515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_17515 PF01751 Toprim domain LIS83_17520 PF13380 CoA binding domain LIS83_17525 PF13180 PDZ domain LIS83_17530 PF00072 Response regulator receiver domain LIS83_17530 PF00486 Transcriptional regulatory protein, C terminal LIS83_17540 PF03477 ATP cone domain LIS83_17540 PF13597 Anaerobic ribonucleoside-triphosphate reductase LIS83_17545 PF02660 Glycerol-3-phosphate acyltransferase LIS83_17550 PF01521 Iron-sulphur cluster biosynthesis LIS83_17555 PF03061 Thioesterase superfamily LIS83_17560 PF00704 Glycosyl hydrolases family 18 LIS83_17560 PF01476 LysM domain LIS83_17570 PF08177 Small acid-soluble spore protein N family LIS83_17575 PF13040 Fur-regulated basic protein B LIS83_17580 PF00929 Exonuclease LIS83_17580 PF02811 PHP domain LIS83_17580 PF01336 OB-fold nucleic acid binding domain LIS83_17580 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LIS83_17580 PF07733 Bacterial DNA polymerase III alpha NTPase domain LIS83_17580 PF11490 DNA polymerase III polC-type N-terminus II LIS83_17580 PF14579 Helix-hairpin-helix motif LIS83_17585 PF00578 AhpC/TSA family LIS83_17595 PF00664 ABC transporter transmembrane region LIS83_17595 PF00005 ABC transporter LIS83_17595 PF03412 Peptidase C39 family LIS83_17600 PF00330 Aconitase family (aconitate hydratase) LIS83_17600 PF00694 Aconitase C-terminal domain LIS83_17610 PF01522 Polysaccharide deacetylase LIS83_17620 PF08179 Small acid-soluble spore protein P family LIS83_17640 PF02272 DHHA1 domain LIS83_17640 PF01411 tRNA synthetases class II (A) LIS83_17640 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LIS83_17645 PF00293 NUDIX domain LIS83_17645 PF13344 Haloacid dehalogenase-like hydrolase LIS83_17655 PF02803 Thiolase, C-terminal domain LIS83_17655 PF00108 Thiolase, N-terminal domain LIS83_17660 PF13193 AMP-binding enzyme C-terminal domain LIS83_17660 PF00501 AMP-binding enzyme LIS83_17665 PF02632 BioY family LIS83_17670 PF13193 AMP-binding enzyme C-terminal domain LIS83_17670 PF00501 AMP-binding enzyme LIS83_17680 PF01381 Helix-turn-helix LIS83_17700 PF05532 CsbD-like LIS83_17730 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LIS83_17730 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LIS83_17740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_17740 PF00512 His Kinase A (phospho-acceptor) domain LIS83_17740 PF00989 PAS fold LIS83_17740 PF13188 PAS domain LIS83_17740 PF13426 PAS domain LIS83_17745 PF01738 Dienelactone hydrolase family LIS83_17750 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LIS83_17755 PF00474 Sodium:solute symporter family LIS83_17760 PF01645 Conserved region in glutamate synthase LIS83_17765 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LIS83_17770 PF02559 CarD-like/TRCF domain LIS83_17775 PF00491 Arginase family LIS83_17780 PF01979 Amidohydrolase family LIS83_17785 PF01175 Urocanase Rossmann-like domain LIS83_17785 PF17392 Urocanase C-terminal domain LIS83_17785 PF17391 Urocanase N-terminal domain LIS83_17790 PF00221 Aromatic amino acid lyase LIS83_17795 PF09021 HutP LIS83_17800 PF01209 ubiE/COQ5 methyltransferase family LIS83_17820 PF11084 Protein of unknown function (DUF2621) LIS83_17840 PF07301 Protein of unknown function (DUF1453) LIS83_17845 PF02683 Cytochrome C biogenesis protein transmembrane region LIS83_17855 PF07687 Peptidase dimerisation domain LIS83_17855 PF01546 Peptidase family M20/M25/M40 LIS83_17865 PF00005 ABC transporter LIS83_17875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIS83_17875 PF03466 LysR substrate binding domain LIS83_17880 PF03788 LrgA family LIS83_17885 PF04172 LrgB-like family LIS83_17890 PF13344 Haloacid dehalogenase-like hydrolase LIS83_17890 PF00293 NUDIX domain LIS83_17900 PF01925 Sulfite exporter TauE/SafE LIS83_17910 PF01471 Putative peptidoglycan binding domain LIS83_17910 PF01510 N-acetylmuramoyl-L-alanine amidase LIS83_17925 PF00664 ABC transporter transmembrane region LIS83_17925 PF00005 ABC transporter LIS83_17930 PF00664 ABC transporter transmembrane region LIS83_17930 PF00005 ABC transporter LIS83_17950 PF06458 MucBP domain LIS83_18020 PF00589 Phage integrase family LIS83_18020 PF02899 Phage integrase, N-terminal SAM-like domain LIS83_18025 PF03672 Uncharacterised protein family (UPF0154) LIS83_18030 PF10747 Sporulation inhibitor of replication protein SirA LIS83_18035 PF02780 Transketolase, C-terminal domain LIS83_18035 PF00456 Transketolase, thiamine diphosphate binding domain LIS83_18035 PF02779 Transketolase, pyrimidine binding domain LIS83_18040 PF00528 Binding-protein-dependent transport system inner membrane component LIS83_18045 PF00528 Binding-protein-dependent transport system inner membrane component LIS83_18050 PF00005 ABC transporter LIS83_18060 PF02872 5'-nucleotidase, C-terminal domain LIS83_18060 PF00149 Calcineurin-like phosphoesterase LIS83_18065 PF05979 Bacterial protein of unknown function (DUF896) LIS83_18070 PF00239 Resolvase, N terminal domain LIS83_18075 PF01726 LexA DNA binding domain LIS83_18075 PF00717 Peptidase S24-like LIS83_18090 PF03551 Transcriptional regulator PadR-like family LIS83_18095 PF03951 Glutamine synthetase, beta-Grasp domain LIS83_18095 PF00120 Glutamine synthetase, catalytic domain LIS83_18100 PF13411 MerR HTH family regulatory protein LIS83_18105 PF06838 Methionine gamma-lyase LIS83_18110 PF01926 50S ribosome-binding GTPase LIS83_18110 PF13167 GTP-binding GTPase N-terminal LIS83_18110 PF16360 GTP-binding GTPase Middle Region LIS83_18115 PF03458 UPF0126 domain LIS83_18120 PF17866 AAA lid domain LIS83_18120 PF00004 ATPase family associated with various cellular activities (AAA) LIS83_18135 PF17209 Hfq protein LIS83_18150 PF01476 LysM domain LIS83_18150 PF06725 3D domain LIS83_18155 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LIS83_18155 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LIS83_18160 PF00294 pfkB family carbohydrate kinase LIS83_18165 PF00455 DeoR C terminal sensor domain LIS83_18165 PF08220 DeoR-like helix-turn-helix domain LIS83_18170 PF00465 Iron-containing alcohol dehydrogenase LIS83_18175 PF04238 Protein of unknown function (DUF420) LIS83_18185 PF00324 Amino acid permease LIS83_18190 PF00041 Fibronectin type III domain LIS83_18190 PF00704 Glycosyl hydrolases family 18 LIS83_18200 PF00149 Calcineurin-like phosphoesterase LIS83_18200 PF10518 TAT (twin-arginine translocation) pathway signal sequence LIS83_18205 PF01226 Formate/nitrite transporter LIS83_18210 PF00216 Bacterial DNA-binding protein LIS83_18215 PF00403 Heavy-metal-associated domain LIS83_18220 PF00403 Heavy-metal-associated domain LIS83_18225 PF02583 Metal-sensitive transcriptional repressor LIS83_18245 PF00756 Putative esterase LIS83_18250 PF00005 ABC transporter LIS83_18255 PF01032 FecCD transport family LIS83_18260 PF01032 FecCD transport family LIS83_18265 PF01497 Periplasmic binding protein LIS83_18270 PF03372 Endonuclease/Exonuclease/phosphatase family LIS83_18275 PF12833 Helix-turn-helix domain LIS83_18275 PF02805 Metal binding domain of Ada LIS83_18280 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LIS83_18280 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LIS83_18285 PF00730 HhH-GPD superfamily base excision DNA repair protein LIS83_18285 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain LIS83_18290 PF07687 Peptidase dimerisation domain LIS83_18290 PF01546 Peptidase family M20/M25/M40 LIS83_18310 PF00561 alpha/beta hydrolase fold LIS83_18315 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LIS83_18320 PF00563 EAL domain LIS83_18320 PF00990 Diguanylate cyclase, GGDEF domain LIS83_18320 PF03707 Bacterial signalling protein N terminal repeat LIS83_18325 PF04101 Glycosyltransferase family 28 C-terminal domain LIS83_18325 PF03033 Glycosyltransferase family 28 N-terminal domain LIS83_18335 PF16363 GDP-mannose 4,6 dehydratase LIS83_18340 PF02719 Polysaccharide biosynthesis protein LIS83_18340 PF08485 Polysaccharide biosynthesis protein C-terminal LIS83_18365 PF10787 Uncharacterised protein from bacillus cereus group LIS83_18380 PF00155 Aminotransferase class I and II LIS83_18380 PF00392 Bacterial regulatory proteins, gntR family LIS83_18400 PF00388 Phosphatidylinositol-specific phospholipase C, X domain LIS83_18405 PF00082 Subtilase family LIS83_18410 PF07486 Cell Wall Hydrolase LIS83_18420 PF00884 Sulfatase LIS83_18425 PF00350 Dynamin family LIS83_18435 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family LIS83_18455 PF13401 AAA domain LIS83_18455 PF11426 Tn7 transposition regulator TnsC LIS83_18465 PF08721 TnsA endonuclease C terminal LIS83_18465 PF08722 TnsA endonuclease N terminal LIS83_18475 PF01381 Helix-turn-helix LIS83_18495 PF02374 Anion-transporting ATPase LIS83_18500 PF06953 Arsenical resistance operon trans-acting repressor ArsD LIS83_18505 PF01451 Low molecular weight phosphotyrosine protein phosphatase LIS83_18510 PF01758 Sodium Bile acid symporter family LIS83_18515 PF01022 Bacterial regulatory protein, arsR family LIS83_18535 PF00230 Major intrinsic protein LIS83_18545 PF01381 Helix-turn-helix LIS83_18565 PF01384 Phosphate transporter family LIS83_18570 PF01022 Bacterial regulatory protein, arsR family LIS83_18575 PF02655 ATP-grasp domain LIS83_18575 PF00206 Lyase LIS83_18585 PF01047 MarR family LIS83_18600 PF08676 MutL C terminal dimerisation domain LIS83_18600 PF01119 DNA mismatch repair protein, C-terminal domain LIS83_18605 PF01624 MutS domain I LIS83_18605 PF05188 MutS domain II LIS83_18605 PF05192 MutS domain III LIS83_18605 PF05190 MutS family domain IV LIS83_18605 PF00488 MutS domain V LIS83_18610 PF10628 Outer spore coat protein E (CotE) LIS83_18615 PF06133 Control of competence regulator ComK, YlbF/YmcA LIS83_18620 PF00919 Uncharacterized protein family UPF0004 LIS83_18620 PF04055 Radical SAM superfamily LIS83_18620 PF01938 TRAM domain LIS83_18625 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LIS83_18630 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase LIS83_18630 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II LIS83_18630 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg LIS83_18635 PF01244 Membrane dipeptidase (Peptidase family M19) LIS83_18640 PF04232 Stage V sporulation protein S (SpoVS) LIS83_18645 PF13277 YmdB-like protein LIS83_18650 PF01966 HD domain LIS83_18650 PF00013 KH domain LIS83_18650 PF12072 Domain of unknown function (DUF3552) LIS83_18665 PF00994 Probable molybdopterin binding domain LIS83_18665 PF18146 Damage-inducible protein CinA KH domain LIS83_18665 PF02464 Competence-damaged protein LIS83_18670 PF01066 CDP-alcohol phosphatidyltransferase LIS83_18675 PF13464 Domain of unknown function (DUF4115) LIS83_18680 PF11868 Protein of unknown function (DUF3388) LIS83_18685 PF11588 Protein of unknown function (DUF3243) LIS83_18695 PF00675 Insulinase (Peptidase family M16) LIS83_18695 PF05193 Peptidase M16 inactive domain LIS83_18700 PF05193 Peptidase M16 inactive domain LIS83_18705 PF02653 Branched-chain amino acid transport system / permease component LIS83_18710 PF02653 Branched-chain amino acid transport system / permease component LIS83_18715 PF00005 ABC transporter LIS83_18720 PF02608 ABC transporter substrate-binding protein PnrA-like LIS83_18725 PF07702 UTRA domain LIS83_18725 PF00392 Bacterial regulatory proteins, gntR family LIS83_18730 PF17854 FtsK alpha domain LIS83_18730 PF01580 FtsK/SpoIIIE family LIS83_18730 PF09397 Ftsk gamma domain LIS83_18735 PF14035 YlzJ-like protein LIS83_18740 PF00574 Clp protease LIS83_18745 PF17770 Ribonuclease J C-terminal domain LIS83_18745 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LIS83_18745 PF00753 Metallo-beta-lactamase superfamily LIS83_18750 PF00701 Dihydrodipicolinate synthetase family LIS83_18755 PF00696 Amino acid kinase family LIS83_18755 PF13840 ACT domain LIS83_18760 PF02774 Semialdehyde dehydrogenase, dimerisation domain LIS83_18760 PF01118 Semialdehyde dehydrogenase, NAD binding domain LIS83_18765 PF02441 Flavoprotein LIS83_18770 PF16924 Dipicolinate synthase subunit A N-terminal domain LIS83_18770 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LIS83_18775 PF05239 PRC-barrel domain LIS83_18780 PF00675 Insulinase (Peptidase family M16) LIS83_18780 PF05193 Peptidase M16 inactive domain LIS83_18785 PF01522 Polysaccharide deacetylase LIS83_18790 PF01138 3' exoribonuclease family, domain 1 LIS83_18790 PF03725 3' exoribonuclease family, domain 2 LIS83_18790 PF00575 S1 RNA binding domain LIS83_18790 PF00013 KH domain LIS83_18790 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LIS83_18795 PF00312 Ribosomal protein S15 LIS83_18800 PF06574 FAD synthetase LIS83_18800 PF01687 Riboflavin kinase LIS83_18805 PF16198 tRNA pseudouridylate synthase B C-terminal domain LIS83_18805 PF01509 TruB family pseudouridylate synthase (N terminal domain) LIS83_18810 PF02033 Ribosome-binding factor A LIS83_18815 PF04456 Protein of unknown function (DUF503) LIS83_18820 PF11987 Translation-initiation factor 2 LIS83_18820 PF04760 Translation initiation factor IF-2, N-terminal region LIS83_18820 PF00009 Elongation factor Tu GTP binding domain LIS83_18825 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family LIS83_18830 PF04296 Protein of unknown function (DUF448) LIS83_18835 PF08529 NusA N-terminal domain LIS83_18835 PF00575 S1 RNA binding domain LIS83_18835 PF13184 NusA-like KH domain LIS83_18840 PF02576 RimP N-terminal domain LIS83_18840 PF17384 RimP C-terminal SH3 domain LIS83_18850 PF01348 Type II intron maturase LIS83_18850 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LIS83_18860 PF03129 Anticodon binding domain LIS83_18860 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LIS83_18860 PF04073 Aminoacyl-tRNA editing domain LIS83_18865 PF02163 Peptidase family M50 LIS83_18865 PF17820 PDZ domain LIS83_18870 PF13288 DXP reductoisomerase C-terminal domain LIS83_18870 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LIS83_18870 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LIS83_18880 PF01255 Putative undecaprenyl diphosphate synthase LIS83_18885 PF01765 Ribosome recycling factor LIS83_18890 PF00696 Amino acid kinase family LIS83_18895 PF00889 Elongation factor TS LIS83_18900 PF00318 Ribosomal protein S2 LIS83_18905 PF06018 CodY GAF-like domain LIS83_18905 PF08222 CodY helix-turn-helix domain LIS83_18910 PF10431 C-terminal, D2-small domain, of ClpB protein LIS83_18910 PF07724 AAA domain (Cdc48 subfamily) LIS83_18910 PF00004 ATPase family associated with various cellular activities (AAA) LIS83_18915 PF00227 Proteasome subunit LIS83_18920 PF00589 Phage integrase family LIS83_18920 PF02899 Phage integrase, N-terminal SAM-like domain LIS83_18925 PF01134 Glucose inhibited division protein A LIS83_18930 PF01396 Topoisomerase DNA binding C4 zinc finger LIS83_18930 PF01131 DNA topoisomerase LIS83_18930 PF01751 Toprim domain LIS83_18935 PF02481 DNA recombination-mediator protein A LIS83_18940 PF02629 CoA binding domain LIS83_18940 PF00549 CoA-ligase LIS83_18945 PF08442 ATP-grasp domain LIS83_18945 PF00549 CoA-ligase LIS83_18950 PF01351 Ribonuclease HII LIS83_18955 PF01926 50S ribosome-binding GTPase LIS83_18960 PF10502 Signal peptidase, peptidase S26 LIS83_18965 PF01245 Ribosomal protein L19 LIS83_18970 PF01746 tRNA (Guanine-1)-methyltransferase LIS83_18975 PF01782 RimM N-terminal domain LIS83_18975 PF05239 PRC-barrel domain LIS83_18985 PF00886 Ribosomal protein S16 LIS83_18990 PF00448 SRP54-type protein, GTPase domain LIS83_18990 PF02881 SRP54-type protein, helical bundle domain LIS83_18990 PF02978 Signal peptide binding domain LIS83_18995 PF04297 Putative helix-turn-helix protein, YlxM / p13 like LIS83_19000 PF00448 SRP54-type protein, GTPase domain LIS83_19000 PF02881 SRP54-type protein, helical bundle domain LIS83_19005 PF06470 SMC proteins Flexible Hinge Domain LIS83_19005 PF02463 RecF/RecN/SMC N terminal domain LIS83_19010 PF00035 Double-stranded RNA binding motif LIS83_19010 PF14622 Ribonuclease-III-like LIS83_19015 PF00550 Phosphopantetheine attachment site LIS83_19025 PF00698 Acyl transferase domain LIS83_19030 PF02504 Fatty acid synthesis protein LIS83_19035 PF03061 Thioesterase superfamily LIS83_19040 PF00270 DEAD/DEAH box helicase LIS83_19040 PF00271 Helicase conserved C-terminal domain LIS83_19040 PF17191 RecG wedge domain LIS83_19045 PF13684 Dihydroxyacetone kinase family LIS83_19045 PF02734 DAK2 domain LIS83_19050 PF03780 Asp23 family, cell envelope-related function LIS83_19055 PF00830 Ribosomal L28 family LIS83_19060 PF08183 Stage V sporulation protein family LIS83_19065 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain LIS83_19065 PF04263 Thiamin pyrophosphokinase, catalytic domain LIS83_19070 PF00834 Ribulose-phosphate 3 epimerase family LIS83_19075 PF03193 RsgA GTPase LIS83_19075 PF16745 RsgA N-terminal domain LIS83_19080 PF03793 PASTA domain LIS83_19080 PF00069 Protein kinase domain LIS83_19090 PF04055 Radical SAM superfamily LIS83_19095 PF01189 16S rRNA methyltransferase RsmB/F LIS83_19095 PF01029 NusB family LIS83_19100 PF02911 Formyl transferase, C-terminal domain LIS83_19100 PF00551 Formyl transferase LIS83_19105 PF01327 Polypeptide deformylase LIS83_19110 PF00271 Helicase conserved C-terminal domain LIS83_19110 PF17764 3′ DNA-binding domain (3′BD) LIS83_19110 PF18074 Primosomal protein N C-terminal domain LIS83_19110 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LIS83_19110 PF04851 Type III restriction enzyme, res subunit LIS83_19115 PF04127 DNA / pantothenate metabolism flavoprotein LIS83_19115 PF02441 Flavoprotein LIS83_19120 PF01192 RNA polymerase Rpb6 LIS83_19125 PF00625 Guanylate kinase LIS83_19130 PF04025 Domain of unknown function (DUF370) LIS83_19135 PF03755 YicC-like family, N-terminal region LIS83_19135 PF08340 Domain of unknown function (DUF1732) LIS83_19140 PF00690 Cation transporter/ATPase, N-terminus LIS83_19140 PF00689 Cation transporting ATPase, C-terminus LIS83_19145 PF05670 NFACT protein RNA binding domain LIS83_19180 PF00156 Phosphoribosyl transferase domain LIS83_19185 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LIS83_19190 PF01180 Dihydroorotate dehydrogenase LIS83_19195 PF00175 Oxidoreductase NAD-binding domain LIS83_19195 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B LIS83_19200 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LIS83_19200 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LIS83_19200 PF02142 MGS-like domain LIS83_19205 PF00117 Glutamine amidotransferase class-I LIS83_19205 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LIS83_19210 PF01979 Amidohydrolase family LIS83_19215 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LIS83_19215 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LIS83_19220 PF00860 Permease family LIS83_19225 PF00156 Phosphoribosyl transferase domain LIS83_19230 PF00849 RNA pseudouridylate synthase LIS83_19230 PF01479 S4 domain LIS83_19235 PF01252 Signal peptidase (SPase) II LIS83_19245 PF08264 Anticodon-binding domain of tRNA LIS83_19245 PF00133 tRNA synthetases class I (I, L, M and V) LIS83_19245 PF06827 Zinc finger found in FPG and IleRS LIS83_19250 PF05103 DivIVA protein LIS83_19255 PF01479 S4 domain LIS83_19255 PF17774 Putative RNA-binding domain in YlmH LIS83_19260 PF02325 YGGT family LIS83_19265 PF04472 Cell division protein SepF LIS83_19270 PF01168 Alanine racemase, N-terminal domain LIS83_19275 PF02578 Multi-copper polyphenol oxidoreductase laccase LIS83_19280 PF05239 PRC-barrel domain LIS83_19285 PF04542 Sigma-70 region 2 LIS83_19285 PF04539 Sigma-70 region 3 LIS83_19285 PF04545 Sigma-70, region 4 LIS83_19290 PF04542 Sigma-70 region 2 LIS83_19290 PF04545 Sigma-70, region 4 LIS83_19295 PF03419 Sporulation factor SpoIIGA LIS83_19300 PF00091 Tubulin/FtsZ family, GTPase domain LIS83_19300 PF12327 FtsZ family, C-terminal domain LIS83_19305 PF02491 SHS2 domain inserted in FTSA LIS83_19310 PF03799 Cell division protein FtsQ LIS83_19310 PF08478 POTRA domain, FtsQ-type LIS83_19315 PF01565 FAD binding domain LIS83_19315 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LIS83_19320 PF04101 Glycosyltransferase family 28 C-terminal domain LIS83_19320 PF03033 Glycosyltransferase family 28 N-terminal domain LIS83_19325 PF01098 Cell cycle protein LIS83_19330 PF02875 Mur ligase family, glutamate ligase domain LIS83_19330 PF08245 Mur ligase middle domain LIS83_19335 PF00953 Glycosyl transferase family 4 LIS83_19335 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LIS83_19340 PF01225 Mur ligase family, catalytic domain LIS83_19340 PF02875 Mur ligase family, glutamate ligase domain LIS83_19340 PF08245 Mur ligase middle domain LIS83_19345 PF03793 PASTA domain LIS83_19345 PF03717 Penicillin-binding Protein dimerisation domain LIS83_19345 PF00905 Penicillin binding protein transpeptidase domain LIS83_19350 PF03793 PASTA domain LIS83_19350 PF03717 Penicillin-binding Protein dimerisation domain LIS83_19350 PF00905 Penicillin binding protein transpeptidase domain LIS83_19355 PF04977 Septum formation initiator LIS83_19360 PF01795 MraW methylase family LIS83_19365 PF10079 Bacillithiol biosynthesis BshC LIS83_19370 PF02558 Ketopantoate reductase PanE/ApbA LIS83_19370 PF08546 Ketopantoate reductase PanE/ApbA C terminal LIS83_19375 PF00583 Acetyltransferase (GNAT) family LIS83_19385 PF01783 Ribosomal L32p protein family LIS83_19390 PF02620 Large ribosomal RNA subunit accumulation protein YceD LIS83_19395 PF05636 HIGH Nucleotidyl Transferase LIS83_19400 PF05362 Lon protease (S16) C-terminal proteolytic domain LIS83_19400 PF13180 PDZ domain LIS83_19405 PF01734 Patatin-like phospholipase LIS83_19410 PF07670 Nucleoside recognition LIS83_19415 PF01467 Cytidylyltransferase-like LIS83_19430 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) LIS83_19435 PF06133 Control of competence regulator ComK, YlbF/YmcA LIS83_19440 PF00300 Histidine phosphatase superfamily (branch 1) LIS83_19445 PF14003 YlbE-like protein LIS83_19450 PF14071 Putative coat protein LIS83_19455 PF00188 Cysteine-rich secretory protein family LIS83_19455 PF14504 CAP-associated N-terminal LIS83_19460 PF08868 YugN-like family LIS83_19465 PF00795 Carbon-nitrogen hydrolase LIS83_19470 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) LIS83_19475 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LIS83_19480 PF00510 Cytochrome c oxidase subunit III LIS83_19485 PF00115 Cytochrome C and Quinol oxidase polypeptide I LIS83_19490 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LIS83_19490 PF02790 Cytochrome C oxidase subunit II, transmembrane domain LIS83_19490 PF00034 Cytochrome c LIS83_19495 PF01040 UbiA prenyltransferase family LIS83_19500 PF02628 Cytochrome oxidase assembly protein LIS83_19505 PF00289 Biotin carboxylase, N-terminal domain LIS83_19505 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LIS83_19505 PF02785 Biotin carboxylase C-terminal domain LIS83_19505 PF00364 Biotin-requiring enzyme LIS83_19505 PF00682 HMGL-like LIS83_19505 PF02436 Conserved carboxylase domain LIS83_19510 PF01098 Cell cycle protein LIS83_19515 PF07408 Protein of unknown function (DUF1507) LIS83_19525 PF13638 PIN domain LIS83_19525 PF02562 PhoH-like protein LIS83_19535 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) LIS83_19545 PF14036 YlaH-like protein LIS83_19550 PF14492 Elongation Factor G, domain II LIS83_19550 PF03144 Elongation factor Tu domain 2 LIS83_19550 PF00679 Elongation factor G C-terminus LIS83_19550 PF00009 Elongation factor Tu GTP binding domain LIS83_19560 PF00459 Inositol monophosphatase family LIS83_19570 PF06335 Protein of unknown function (DUF1054) LIS83_19575 PF05256 Uncharacterised protein family (UPF0223) LIS83_19580 PF01276 Orn/Lys/Arg decarboxylase, major domain LIS83_19580 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LIS83_19620 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LIS83_19620 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIS83_19625 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LIS83_19625 PF02817 e3 binding domain LIS83_19625 PF00364 Biotin-requiring enzyme LIS83_19630 PF02780 Transketolase, C-terminal domain LIS83_19630 PF02779 Transketolase, pyrimidine binding domain LIS83_19635 PF00676 Dehydrogenase E1 component LIS83_19645 PF01327 Polypeptide deformylase LIS83_19655 PF07288 Protein of unknown function (DUF1447) LIS83_19660 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LIS83_19660 PF00753 Metallo-beta-lactamase superfamily LIS83_19660 PF17770 Ribonuclease J C-terminal domain LIS83_19665 PF02080 TrkA-C domain LIS83_19665 PF02254 TrkA-N domain LIS83_19675 PF07687 Peptidase dimerisation domain LIS83_19675 PF01546 Peptidase family M20/M25/M40 LIS83_19680 PF14602 Hexapeptide repeat of succinyl-transferase LIS83_19680 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal LIS83_19680 PF00132 Bacterial transferase hexapeptide (six repeats) LIS83_19685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIS83_19685 PF03466 LysR substrate binding domain LIS83_19700 PF04308 Ribonuclease H-like LIS83_19710 PF08796 Protein of unknown function (DUF1797) LIS83_19725 PF00563 EAL domain LIS83_19725 PF10388 EAL-domain associated signalling protein domain LIS83_19735 PF00149 Calcineurin-like phosphoesterase LIS83_19735 PF10518 TAT (twin-arginine translocation) pathway signal sequence LIS83_19745 PF13090 Polyphosphate kinase C-terminal domain 2 LIS83_19745 PF02503 Polyphosphate kinase middle domain LIS83_19745 PF17941 Polyphosphate kinase C-terminal domain 1 LIS83_19745 PF13089 Polyphosphate kinase N-terminal domain LIS83_19750 PF02541 Ppx/GppA phosphatase family LIS83_19755 PF14177 YkyB-like protein LIS83_19780 PF07690 Major Facilitator Superfamily LIS83_19790 PF01717 Cobalamin-independent synthase, Catalytic domain LIS83_19790 PF08267 Cobalamin-independent synthase, N-terminal domain LIS83_19800 PF14040 Deoxyribonuclease NucA/NucB LIS83_19810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_19810 PF00512 His Kinase A (phospho-acceptor) domain LIS83_19820 PF00155 Aminotransferase class I and II LIS83_19825 PF00356 Bacterial regulatory proteins, lacI family LIS83_19825 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LIS83_19830 PF00528 Binding-protein-dependent transport system inner membrane component LIS83_19835 PF00528 Binding-protein-dependent transport system inner membrane component LIS83_19840 PF13416 Bacterial extracellular solute-binding protein LIS83_19845 PF16657 Maltogenic Amylase, C-terminal domain LIS83_19845 PF02903 Alpha amylase, N-terminal ig-like domain LIS83_19845 PF00128 Alpha amylase, catalytic domain LIS83_19850 PF16657 Maltogenic Amylase, C-terminal domain LIS83_19850 PF00128 Alpha amylase, catalytic domain LIS83_19855 PF00005 ABC transporter LIS83_19855 PF17912 MalK OB fold domain LIS83_19855 PF03459 TOBE domain LIS83_19900 PF02803 Thiolase, C-terminal domain LIS83_19900 PF00108 Thiolase, N-terminal domain LIS83_19905 PF00293 NUDIX domain LIS83_19935 PF03551 Transcriptional regulator PadR-like family LIS83_19950 PF01008 Initiation factor 2 subunit family LIS83_19955 PF01636 Phosphotransferase enzyme family LIS83_19960 PF00795 Carbon-nitrogen hydrolase LIS83_19965 PF00155 Aminotransferase class I and II LIS83_19970 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain LIS83_19970 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain LIS83_19980 PF00596 Class II Aldolase and Adducin N-terminal domain LIS83_19985 PF03079 ARD/ARD' family LIS83_20000 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LIS83_20000 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LIS83_20005 PF00990 Diguanylate cyclase, GGDEF domain LIS83_20005 PF08448 PAS fold LIS83_20010 PF00881 Nitroreductase family LIS83_20025 PF05524 PEP-utilising enzyme, N-terminal LIS83_20025 PF00391 PEP-utilising enzyme, mobile domain LIS83_20025 PF02896 PEP-utilising enzyme, TIM barrel domain LIS83_20030 PF00381 PTS HPr component phosphorylation site LIS83_20035 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LIS83_20035 PF00367 phosphotransferase system, EIIB LIS83_20035 PF02378 Phosphotransferase system, EIIC LIS83_20040 PF00874 PRD domain LIS83_20040 PF03123 CAT RNA binding domain LIS83_20050 PF00392 Bacterial regulatory proteins, gntR family LIS83_20050 PF07702 UTRA domain LIS83_20055 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LIS83_20060 PF01979 Amidohydrolase family LIS83_20070 PF04079 Segregation and condensation complex subunit ScpB LIS83_20075 PF02616 Segregation and condensation protein ScpA LIS83_20085 PF03745 Domain of unknown function (DUF309) LIS83_20090 PF00583 Acetyltransferase (GNAT) family LIS83_20100 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LIS83_20105 PF06207 Protein of unknown function (DUF1002) LIS83_20115 PF03323 Bacillus/Clostridium GerA spore germination protein LIS83_20120 PF14097 Stage V sporulation protein AE1 LIS83_20125 PF03862 SpoVAC/SpoVAEB sporulation membrane protein LIS83_20130 PF07451 Stage V sporulation protein AD (SpoVAD) LIS83_20135 PF03862 SpoVAC/SpoVAEB sporulation membrane protein LIS83_20140 PF13782 Stage V sporulation protein AB LIS83_20145 PF12164 Stage V sporulation protein AA LIS83_20155 PF00209 Sodium:neurotransmitter symporter family LIS83_20160 PF04542 Sigma-70 region 2 LIS83_20160 PF04545 Sigma-70, region 4 LIS83_20160 PF04539 Sigma-70 region 3 LIS83_20165 PF13581 Histidine kinase-like ATPase domain LIS83_20170 PF01740 STAS domain LIS83_20175 PF07943 Penicillin-binding protein 5, C-terminal domain LIS83_20175 PF00768 D-alanyl-D-alanine carboxypeptidase LIS83_20180 PF00392 Bacterial regulatory proteins, gntR family LIS83_20185 PF00005 ABC transporter LIS83_20200 PF01047 MarR family LIS83_20210 PF00860 Permease family LIS83_20215 PF01544 CorA-like Mg2+ transporter protein LIS83_20220 PF00591 Glycosyl transferase family, a/b domain LIS83_20220 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain LIS83_20220 PF02885 Glycosyl transferase family, helical bundle domain LIS83_20225 PF01048 Phosphorylase superfamily LIS83_20230 PF01676 Metalloenzyme superfamily LIS83_20240 PF02899 Phage integrase, N-terminal SAM-like domain LIS83_20240 PF00589 Phage integrase family LIS83_20245 PF14004 Protein of unknown function (DUF4227) LIS83_20250 PF01475 Ferric uptake regulator family LIS83_20255 PF01944 Stage II sporulation protein M LIS83_20265 PF00293 NUDIX domain LIS83_20270 PF13072 Mother cell inhibitor of FtsZ LIS83_20275 PF00248 Aldo/keto reductase family LIS83_20280 PF00248 Aldo/keto reductase family LIS83_20285 PF13673 Acetyltransferase (GNAT) domain LIS83_20285 PF04229 GrpB protein LIS83_20295 PF00565 Staphylococcal nuclease homologue LIS83_20295 PF00746 LPXTG cell wall anchor motif LIS83_20295 PF00149 Calcineurin-like phosphoesterase LIS83_20295 PF02872 5'-nucleotidase, C-terminal domain LIS83_20305 PF12146 Serine aminopeptidase, S33 LIS83_20310 PF13726 Na+-H+ antiporter family LIS83_20310 PF03553 Na+/H+ antiporter family LIS83_20315 PF00356 Bacterial regulatory proteins, lacI family LIS83_20320 PF00583 Acetyltransferase (GNAT) family LIS83_20325 PF12146 Serine aminopeptidase, S33 LIS83_20330 PF10827 Protein of unknown function (DUF2552) LIS83_20340 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LIS83_20340 PF01872 RibD C-terminal domain LIS83_20345 PF00677 Lumazine binding domain LIS83_20350 PF00925 GTP cyclohydrolase II LIS83_20350 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LIS83_20355 PF00885 6,7-dimethyl-8-ribityllumazine synthase LIS83_20365 PF06968 Biotin and Thiamin Synthesis associated domain LIS83_20365 PF04055 Radical SAM superfamily LIS83_20370 PF13847 Methyltransferase domain LIS83_20375 PF12697 Alpha/beta hydrolase family LIS83_20375 PF08241 Methyltransferase domain LIS83_20380 PF00155 Aminotransferase class I and II LIS83_20390 PF00202 Aminotransferase class-III LIS83_20400 PF03553 Na+/H+ antiporter family LIS83_20405 PF00149 Calcineurin-like phosphoesterase LIS83_20405 PF02872 5'-nucleotidase, C-terminal domain LIS83_20415 PF01037 Lrp/AsnC ligand binding domain LIS83_20415 PF13404 AsnC-type helix-turn-helix domain LIS83_20430 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LIS83_20430 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LIS83_20435 PF00202 Aminotransferase class-III LIS83_20440 PF00696 Amino acid kinase family LIS83_20445 PF01960 ArgJ family LIS83_20450 PF02774 Semialdehyde dehydrogenase, dimerisation domain LIS83_20450 PF01118 Semialdehyde dehydrogenase, NAD binding domain LIS83_20460 PF00106 short chain dehydrogenase LIS83_20465 PF00753 Metallo-beta-lactamase superfamily LIS83_20470 PF03807 NADP oxidoreductase coenzyme F420-dependent LIS83_20470 PF14748 Pyrroline-5-carboxylate reductase dimerisation LIS83_20475 PF03313 Serine dehydratase alpha chain LIS83_20480 PF01842 ACT domain LIS83_20480 PF03315 Serine dehydratase beta chain LIS83_20490 PF00753 Metallo-beta-lactamase superfamily LIS83_20490 PF12706 Beta-lactamase superfamily domain LIS83_20500 PF11798 IMS family HHH motif LIS83_20500 PF00817 impB/mucB/samB family LIS83_20500 PF11799 impB/mucB/samB family C-terminal domain LIS83_20510 PF01546 Peptidase family M20/M25/M40 LIS83_20510 PF07687 Peptidase dimerisation domain LIS83_20515 PF13302 Acetyltransferase (GNAT) domain LIS83_20530 PF03734 L,D-transpeptidase catalytic domain LIS83_20535 PF06081 Aromatic acid exporter family member 1 LIS83_20535 PF11728 Putative aromatic acid exporter C-terminal domain LIS83_20540 PF00005 ABC transporter LIS83_20545 PF00528 Binding-protein-dependent transport system inner membrane component LIS83_20550 PF00497 Bacterial extracellular solute-binding proteins, family 3 LIS83_20555 PF06491 Disulphide isomerase LIS83_20560 PF11208 Protein of unknown function (DUF2992) LIS83_20565 PF00293 NUDIX domain LIS83_20565 PF09297 NADH pyrophosphatase zinc ribbon domain LIS83_20570 PF01098 Cell cycle protein LIS83_20575 PF00364 Biotin-requiring enzyme LIS83_20575 PF02817 e3 binding domain LIS83_20575 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LIS83_20580 PF02779 Transketolase, pyrimidine binding domain LIS83_20580 PF02780 Transketolase, C-terminal domain LIS83_20585 PF00676 Dehydrogenase E1 component LIS83_20590 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIS83_20590 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LIS83_20595 PF00871 Acetokinase family LIS83_20600 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LIS83_20600 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LIS83_20605 PF01515 Phosphate acetyl/butaryl transferase LIS83_20610 PF02954 Bacterial regulatory protein, Fis family LIS83_20610 PF00158 Sigma-54 interaction domain LIS83_20610 PF00989 PAS fold LIS83_20620 PF03009 Glycerophosphoryl diester phosphodiesterase family LIS83_20625 PF14174 YycC-like protein LIS83_20635 PF00072 Response regulator receiver domain LIS83_20635 PF08769 Sporulation initiation factor Spo0A C terminal LIS83_20640 PF17820 PDZ domain LIS83_20640 PF05580 SpoIVB peptidase S55 LIS83_20645 PF13476 AAA domain LIS83_20650 PF01316 Arginine repressor, DNA binding domain LIS83_20650 PF02863 Arginine repressor, C-terminal domain LIS83_20655 PF01728 FtsJ-like methyltransferase LIS83_20655 PF01479 S4 domain LIS83_20660 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LIS83_20660 PF02779 Transketolase, pyrimidine binding domain LIS83_20660 PF02780 Transketolase, C-terminal domain LIS83_20665 PF00348 Polyprenyl synthetase LIS83_20670 PF02609 Exonuclease VII small subunit LIS83_20675 PF02601 Exonuclease VII, large subunit LIS83_20675 PF13742 OB-fold nucleic acid binding domain LIS83_20680 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LIS83_20680 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LIS83_20685 PF01029 NusB family LIS83_20690 PF03780 Asp23 family, cell envelope-related function LIS83_20695 PF02785 Biotin carboxylase C-terminal domain LIS83_20695 PF00289 Biotin carboxylase, N-terminal domain LIS83_20695 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LIS83_20700 PF00364 Biotin-requiring enzyme LIS83_20710 PF12685 SpoIIIAH-like protein LIS83_20720 PF09581 Stage III sporulation protein AF (Spore_III_AF) LIS83_20725 PF09546 Stage III sporulation protein AE (spore_III_AE) LIS83_20730 PF06686 Stage III sporulation protein AC/AD protein family LIS83_20735 PF06686 Stage III sporulation protein AC/AD protein family LIS83_20740 PF09548 Stage III sporulation protein AB (spore_III_AB) LIS83_20765 PF09285 Elongation factor P, C-terminal LIS83_20765 PF08207 Elongation factor P (EF-P) KOW-like domain LIS83_20765 PF01132 Elongation factor P (EF-P) OB domain LIS83_20770 PF00557 Metallopeptidase family M24 LIS83_20770 PF01321 Creatinase/Prolidase N-terminal domain LIS83_20775 PF01220 Dehydroquinase class II LIS83_20780 PF11085 Conserved membrane protein YqhR LIS83_20785 PF07136 Protein of unknown function (DUF1385) LIS83_20795 PF13419 Haloacid dehalogenase-like hydrolase LIS83_20800 PF02742 Iron dependent repressor, metal binding and dimerisation domain LIS83_20800 PF01325 Iron dependent repressor, N-terminal DNA binding domain LIS83_20810 PF03551 Transcriptional regulator PadR-like family LIS83_20825 PF03099 Biotin/lipoate A/B protein ligase family LIS83_20830 PF00581 Rhodanese-like domain LIS83_20835 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LIS83_20835 PF00356 Bacterial regulatory proteins, lacI family LIS83_20845 PF00893 Small Multidrug Resistance protein LIS83_20850 PF00893 Small Multidrug Resistance protein LIS83_20885 PF00005 ABC transporter LIS83_20890 PF00392 Bacterial regulatory proteins, gntR family LIS83_20905 PF02347 Glycine cleavage system P-protein LIS83_20910 PF02347 Glycine cleavage system P-protein LIS83_20915 PF01571 Aminomethyltransferase folate-binding domain LIS83_20915 PF08669 Glycine cleavage T-protein C-terminal barrel domain LIS83_20920 PF00271 Helicase conserved C-terminal domain LIS83_20920 PF00176 SNF2 family N-terminal domain LIS83_20925 PF11079 Bacterial protein YqhG of unknown function LIS83_20945 PF14038 YqzE-like protein LIS83_20950 PF01202 Shikimate kinase LIS83_20975 PF07963 Prokaryotic N-terminal methylation motif LIS83_20985 PF00482 Type II secretion system (T2SS), protein F LIS83_20990 PF00437 Type II/IV secretion system protein LIS83_21000 PF11117 Protein of unknown function (DUF2626) LIS83_21005 PF00375 Sodium:dicarboxylate symporter family LIS83_21035 PF04101 Glycosyltransferase family 28 C-terminal domain LIS83_21035 PF03033 Glycosyltransferase family 28 N-terminal domain LIS83_21040 PF02310 B12 binding domain LIS83_21040 PF02607 B12 binding domain LIS83_21040 PF02965 Vitamin B12 dependent methionine synthase, activation domain LIS83_21040 PF00809 Pterin binding enzyme LIS83_21040 PF02574 Homocysteine S-methyltransferase LIS83_21045 PF02574 Homocysteine S-methyltransferase LIS83_21045 PF02219 Methylenetetrahydrofolate reductase LIS83_21050 PF01053 Cys/Met metabolism PLP-dependent enzyme LIS83_21055 PF01053 Cys/Met metabolism PLP-dependent enzyme LIS83_21065 PF01022 Bacterial regulatory protein, arsR family LIS83_21075 PF00753 Metallo-beta-lactamase superfamily LIS83_21080 PF10958 Protein of unknown function (DUF2759) LIS83_21085 PF00480 ROK family LIS83_21090 PF06014 Bacterial protein of unknown function (DUF910) LIS83_21095 PF01812 5-formyltetrahydrofolate cyclo-ligase family LIS83_21100 PF00471 Ribosomal protein L33 LIS83_21105 PF00483 Nucleotidyl transferase LIS83_21110 PF01895 PhoU domain LIS83_21115 PF00005 ABC transporter LIS83_21120 PF00528 Binding-protein-dependent transport system inner membrane component LIS83_21125 PF00528 Binding-protein-dependent transport system inner membrane component LIS83_21130 PF12849 PBP superfamily domain LIS83_21135 PF03717 Penicillin-binding Protein dimerisation domain LIS83_21135 PF00905 Penicillin binding protein transpeptidase domain LIS83_21140 PF07690 Major Facilitator Superfamily LIS83_21145 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LIS83_21145 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LIS83_21165 PF04551 GcpE protein LIS83_21170 PF01475 Ferric uptake regulator family LIS83_21175 PF00950 ABC 3 transport family LIS83_21180 PF00005 ABC transporter LIS83_21185 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LIS83_21185 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LIS83_21190 PF11116 Protein of unknown function (DUF2624) LIS83_21195 PF01261 Xylose isomerase-like TIM barrel LIS83_21200 PF00270 DEAD/DEAH box helicase LIS83_21200 PF00271 Helicase conserved C-terminal domain LIS83_21210 PF02401 LytB protein LIS83_21215 PF01784 NIF3 (NGG1p interacting factor 3) LIS83_21220 PF04816 tRNA (adenine(22)-N(1))-methyltransferase LIS83_21225 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LIS83_21230 PF04539 Sigma-70 region 3 LIS83_21230 PF04545 Sigma-70, region 4 LIS83_21230 PF04542 Sigma-70 region 2 LIS83_21230 PF00140 Sigma-70 factor, region 1.2 LIS83_21230 PF03979 Sigma-70 factor, region 1.1 LIS83_21235 PF01807 CHC2 zinc finger LIS83_21235 PF08275 DNA primase catalytic core, N-terminal domain LIS83_21235 PF10410 DnaB-helicase binding domain of primase LIS83_21240 PF03618 Kinase/pyrophosphorylase LIS83_21245 PF08279 HTH domain LIS83_21245 PF00571 CBS domain LIS83_21250 PF02565 Recombination protein O C terminal LIS83_21250 PF11967 Recombination protein O N terminal LIS83_21260 PF07650 KH domain LIS83_21260 PF01926 50S ribosome-binding GTPase LIS83_21265 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LIS83_21270 PF01219 Prokaryotic diacylglycerol kinase LIS83_21275 PF02130 Uncharacterized protein family UPF0054 LIS83_21280 PF07698 7TM receptor with intracellular HD hydrolase LIS83_21280 PF01966 HD domain LIS83_21280 PF07697 7TM-HD extracellular LIS83_21285 PF02562 PhoH-like protein LIS83_21290 PF06898 Putative stage IV sporulation protein YqfD LIS83_21295 PF07873 YabP family LIS83_21300 PF09424 Yqey-like protein LIS83_21305 PF01165 Ribosomal protein S21 LIS83_21310 PF04055 Radical SAM superfamily LIS83_21310 PF01938 TRAM domain LIS83_21310 PF00919 Uncharacterized protein family UPF0004 LIS83_21315 PF04452 RNA methyltransferase LIS83_21325 PF01556 DnaJ C terminal domain LIS83_21325 PF00226 DnaJ domain LIS83_21325 PF00684 DnaJ central domain LIS83_21330 PF00012 Hsp70 protein LIS83_21335 PF01025 GrpE LIS83_21340 PF01628 HrcA protein C terminal domain LIS83_21345 PF06969 HemN C-terminal domain LIS83_21345 PF04055 Radical SAM superfamily LIS83_21350 PF01638 HxlR-like helix-turn-helix LIS83_21355 PF03144 Elongation factor Tu domain 2 LIS83_21355 PF06421 GTP-binding protein LepA C-terminus LIS83_21355 PF00679 Elongation factor G C-terminus LIS83_21355 PF00009 Elongation factor Tu GTP binding domain LIS83_21365 PF03418 Germination protease LIS83_21370 PF01649 Ribosomal protein S20 LIS83_21375 PF06144 DNA polymerase III, delta subunit LIS83_21380 PF14141 YqzM-like protein LIS83_21385 PF03772 Competence protein LIS83_21385 PF13567 Domain of unknown function (DUF4131) LIS83_21385 PF00753 Metallo-beta-lactamase superfamily LIS83_21390 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LIS83_21395 PF10531 SLBB domain LIS83_21400 PF03807 NADP oxidoreductase coenzyme F420-dependent LIS83_21400 PF14748 Pyrroline-5-carboxylate reductase dimerisation LIS83_21405 PF13649 Methyltransferase domain LIS83_21415 PF01966 HD domain LIS83_21420 PF01467 Cytidylyltransferase-like LIS83_21425 PF01985 CRS1 / YhbY (CRM) domain LIS83_21430 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LIS83_21430 PF01488 Shikimate / quinate 5-dehydrogenase LIS83_21430 PF08501 Shikimate dehydrogenase substrate binding domain LIS83_21435 PF01926 50S ribosome-binding GTPase LIS83_21450 PF02666 Phosphatidylserine decarboxylase LIS83_21455 PF04542 Sigma-70 region 2 LIS83_21455 PF04545 Sigma-70, region 4 LIS83_21465 PF16244 Domain of unknown function (DUF4901) LIS83_21470 PF00471 Ribosomal protein L33 LIS83_21475 PF00881 Nitroreductase family LIS83_21480 PF04607 Region found in RelA / SpoT proteins LIS83_21490 PF00245 Alkaline phosphatase LIS83_21500 PF00561 alpha/beta hydrolase fold LIS83_21500 PF08386 TAP-like protein LIS83_21535 PF05922 Peptidase inhibitor I9 LIS83_21535 PF13860 FlgD Ig-like domain LIS83_21535 PF00082 Subtilase family LIS83_21535 PF02225 PA domain LIS83_21540 PF00351 Biopterin-dependent aromatic amino acid hydroxylase LIS83_21550 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LIS83_21555 PF07681 DoxX LIS83_21585 PF00005 ABC transporter LIS83_21590 PF01032 FecCD transport family LIS83_21595 PF01497 Periplasmic binding protein LIS83_21600 PF14143 YrhC-like protein LIS83_21605 PF00465 Iron-containing alcohol dehydrogenase LIS83_21605 PF00171 Aldehyde dehydrogenase family LIS83_21610 PF01053 Cys/Met metabolism PLP-dependent enzyme LIS83_21615 PF00291 Pyridoxal-phosphate dependent enzyme LIS83_21620 PF01048 Phosphorylase superfamily LIS83_21625 PF08241 Methyltransferase domain LIS83_21640 PF00905 Penicillin binding protein transpeptidase domain LIS83_21640 PF03717 Penicillin-binding Protein dimerisation domain LIS83_21645 PF03449 Transcription elongation factor, N-terminal LIS83_21645 PF01272 Transcription elongation factor, GreA/GreB, C-term LIS83_21650 PF00485 Phosphoribulokinase / Uridine kinase family LIS83_21655 PF16325 Peptidase family U32 C-terminal domain LIS83_21655 PF01136 Peptidase family U32 LIS83_21660 PF01136 Peptidase family U32 LIS83_21665 PF01596 O-methyltransferase LIS83_21670 PF02618 YceG-like family LIS83_21675 PF06949 Protein of unknown function (DUF1292) LIS83_21680 PF03652 Holliday junction resolvase LIS83_21685 PF06135 IreB regulatory phosphoprotein LIS83_21690 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LIS83_21690 PF02272 DHHA1 domain LIS83_21690 PF01411 tRNA synthetases class II (A) LIS83_21700 PF01594 AI-2E family transporter LIS83_21720 PF14490 Helix-hairpin-helix containing domain LIS83_21720 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain LIS83_21720 PF13538 UvrD-like helicase C-terminal domain LIS83_21735 PF00266 Aminotransferase class-V LIS83_21740 PF02082 Transcriptional regulator LIS83_21745 PF05496 Holliday junction DNA helicase RuvB P-loop domain LIS83_21745 PF16193 AAA C-terminal domain LIS83_21745 PF12002 MgsA AAA+ ATPase C terminal LIS83_21755 PF00899 ThiF family LIS83_21760 PF02938 GAD domain LIS83_21760 PF00152 tRNA synthetases class II (D, K and N) LIS83_21760 PF01336 OB-fold nucleic acid binding domain LIS83_21765 PF03129 Anticodon binding domain LIS83_21765 PF13393 Histidyl-tRNA synthetase LIS83_21775 PF02580 D-Tyr-tRNA(Tyr) deacylase LIS83_21780 PF04607 Region found in RelA / SpoT proteins LIS83_21780 PF13291 ACT domain LIS83_21780 PF02824 TGS domain LIS83_21785 PF00156 Phosphoribosyl transferase domain LIS83_21790 PF02272 DHHA1 domain LIS83_21790 PF01368 DHH family LIS83_21790 PF10141 Single-strand DNA-specific exonuclease, C terminal domain LIS83_21790 PF17768 RecJ OB domain LIS83_21795 PF16916 Dimerisation domain of Zinc Transporter LIS83_21795 PF01545 Cation efflux family LIS83_21800 PF07549 SecD/SecF GG Motif LIS83_21800 PF02355 Protein export membrane protein LIS83_21805 PF13797 Post-transcriptional regulator LIS83_21810 PF01943 Polysaccharide biosynthesis protein LIS83_21810 PF14667 Polysaccharide biosynthesis C-terminal domain LIS83_21815 PF04239 Protein of unknown function (DUF421) LIS83_21825 PF02699 Preprotein translocase subunit LIS83_21830 PF01702 Queuine tRNA-ribosyltransferase LIS83_21835 PF02547 Queuosine biosynthesis protein LIS83_21840 PF11146 Protein of unknown function (DUF2905) LIS83_21845 PF05496 Holliday junction DNA helicase RuvB P-loop domain LIS83_21845 PF05491 RuvB C-terminal winged helix domain LIS83_21845 PF17864 RuvB AAA lid domain LIS83_21850 PF01330 RuvA N terminal domain LIS83_21850 PF07499 RuvA, C-terminal domain LIS83_21855 PF01497 Periplasmic binding protein LIS83_21865 PF00892 EamA-like transporter family LIS83_21870 PF01022 Bacterial regulatory protein, arsR family LIS83_21885 PF01476 LysM domain LIS83_21890 PF02445 Quinolinate synthetase A protein LIS83_21895 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LIS83_21895 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LIS83_21900 PF02910 Fumarate reductase flavoprotein C-term LIS83_21900 PF00890 FAD binding domain LIS83_21905 PF00266 Aminotransferase class-V LIS83_21910 PF08279 HTH domain LIS83_21910 PF02829 3H domain LIS83_21915 PF03473 MOSC domain LIS83_21915 PF03475 3-alpha domain LIS83_21920 PF01842 ACT domain LIS83_21920 PF00800 Prephenate dehydratase LIS83_21925 PF02687 FtsX-like permease family LIS83_21930 PF02687 FtsX-like permease family LIS83_21935 PF00005 ABC transporter LIS83_21940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_21945 PF00072 Response regulator receiver domain LIS83_21945 PF00486 Transcriptional regulatory protein, C terminal LIS83_21950 PF01926 50S ribosome-binding GTPase LIS83_21950 PF09269 Domain of unknown function (DUF1967) LIS83_21950 PF01018 GTP1/OBG LIS83_21955 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LIS83_21955 PF14682 Sporulation initiation phospho-transferase B, C-terminal LIS83_21960 PF01016 Ribosomal L27 protein LIS83_21965 PF04327 Cysteine protease Prp LIS83_21970 PF00829 Ribosomal prokaryotic L21 protein LIS83_21975 PF00575 S1 RNA binding domain LIS83_21975 PF10150 Ribonuclease E/G family LIS83_21980 PF02163 Peptidase family M50 LIS83_21985 PF01551 Peptidase family M23 LIS83_21990 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LIS83_21995 PF03775 Septum formation inhibitor MinC, C-terminal domain LIS83_22005 PF04085 rod shape-determining protein MreC LIS83_22015 PF04002 RadC-like JAB domain LIS83_22020 PF02545 Maf-like protein LIS83_22030 PF02875 Mur ligase family, glutamate ligase domain LIS83_22030 PF08245 Mur ligase middle domain LIS83_22035 PF08264 Anticodon-binding domain of tRNA LIS83_22035 PF00133 tRNA synthetases class I (I, L, M and V) LIS83_22035 PF10458 Valyl tRNA synthetase tRNA binding arm LIS83_22045 PF01476 LysM domain LIS83_22050 PF00202 Aminotransferase class-III LIS83_22055 PF00490 Delta-aminolevulinic acid dehydratase LIS83_22060 PF02602 Uroporphyrinogen-III synthase HemD LIS83_22065 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LIS83_22065 PF03900 Porphobilinogen deaminase, C-terminal domain LIS83_22070 PF01578 Cytochrome C assembly protein LIS83_22075 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LIS83_22075 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LIS83_22075 PF01488 Shikimate / quinate 5-dehydrogenase LIS83_22080 PF01047 MarR family LIS83_22085 PF02566 OsmC-like protein LIS83_22090 PF01926 50S ribosome-binding GTPase LIS83_22095 PF02190 ATP-dependent protease La (LON) substrate-binding domain LIS83_22095 PF00004 ATPase family associated with various cellular activities (AAA) LIS83_22095 PF05362 Lon protease (S16) C-terminal proteolytic domain LIS83_22100 PF05362 Lon protease (S16) C-terminal proteolytic domain LIS83_22100 PF00004 ATPase family associated with various cellular activities (AAA) LIS83_22105 PF10431 C-terminal, D2-small domain, of ClpB protein LIS83_22105 PF07724 AAA domain (Cdc48 subfamily) LIS83_22105 PF06689 ClpX C4-type zinc finger LIS83_22110 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LIS83_22110 PF05698 Bacterial trigger factor protein (TF) C-terminus LIS83_22110 PF05697 Bacterial trigger factor protein (TF) LIS83_22130 PF08000 Bacterial PH domain LIS83_22130 PF11724 YvbH-like oligomerisation region LIS83_22150 PF12850 Calcineurin-like phosphoesterase superfamily domain LIS83_22155 PF01725 Ham1 family LIS83_22160 PF01138 3' exoribonuclease family, domain 1 LIS83_22160 PF03725 3' exoribonuclease family, domain 2 LIS83_22165 PF10646 Sporulation and spore germination LIS83_22170 PF01177 Asp/Glu/Hydantoin racemase LIS83_22175 PF07690 Major Facilitator Superfamily LIS83_22185 PF00440 Bacterial regulatory proteins, tetR family LIS83_22190 PF01965 DJ-1/PfpI family LIS83_22200 PF00196 Bacterial regulatory proteins, luxR family LIS83_22205 PF00860 Permease family LIS83_22210 PF07969 Amidohydrolase family LIS83_22220 PF01381 Helix-turn-helix LIS83_22220 PF07883 Cupin domain LIS83_22225 PF13536 Putative multidrug resistance efflux transporter LIS83_22230 PF00230 Major intrinsic protein LIS83_22235 PF02082 Transcriptional regulator LIS83_22245 PF00005 ABC transporter LIS83_22245 PF13732 Domain of unknown function (DUF4162) LIS83_22250 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) LIS83_22255 PF13677 Membrane MotB of proton-channel complex MotA/MotB LIS83_22255 PF00691 OmpA family LIS83_22260 PF01618 MotA/TolQ/ExbB proton channel family LIS83_22265 PF02557 D-alanyl-D-alanine carboxypeptidase LIS83_22270 PF03061 Thioesterase superfamily LIS83_22275 PF13183 4Fe-4S dicluster domain LIS83_22275 PF13085 2Fe-2S iron-sulfur cluster binding domain LIS83_22280 PF00890 FAD binding domain LIS83_22280 PF02910 Fumarate reductase flavoprotein C-term LIS83_22285 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LIS83_22290 PF10702 Protein of unknown function (DUF2507) LIS83_22295 PF08459 UvrC Helix-hairpin-helix N-terminal LIS83_22295 PF02151 UvrB/uvrC motif LIS83_22295 PF01541 GIY-YIG catalytic domain LIS83_22300 PF00085 Thioredoxin LIS83_22305 PF01012 Electron transfer flavoprotein domain LIS83_22305 PF00766 Electron transfer flavoprotein FAD-binding domain LIS83_22310 PF01012 Electron transfer flavoprotein domain LIS83_22315 PF00378 Enoyl-CoA hydratase/isomerase LIS83_22320 PF00440 Bacterial regulatory proteins, tetR family LIS83_22320 PF08359 YsiA-like protein, C-terminal region LIS83_22325 PF13193 AMP-binding enzyme C-terminal domain LIS83_22325 PF00501 AMP-binding enzyme LIS83_22335 PF01497 Periplasmic binding protein LIS83_22340 PF01032 FecCD transport family LIS83_22345 PF05163 DinB family LIS83_22370 PF00005 ABC transporter LIS83_22375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_22375 PF00512 His Kinase A (phospho-acceptor) domain LIS83_22380 PF00486 Transcriptional regulatory protein, C terminal LIS83_22380 PF00072 Response regulator receiver domain LIS83_22390 PF09962 Uncharacterized conserved protein (DUF2196) LIS83_22395 PF10672 S-adenosylmethionine-dependent methyltransferase LIS83_22395 PF17785 PUA-like domain LIS83_22405 PF03992 Antibiotic biosynthesis monooxygenase LIS83_22410 PF04203 Sortase domain LIS83_22415 PF00005 ABC transporter LIS83_22420 PF01032 FecCD transport family LIS83_22425 PF01497 Periplasmic binding protein LIS83_22430 PF05031 Iron Transport-associated domain LIS83_22435 PF05031 Iron Transport-associated domain LIS83_22440 PF05525 Branched-chain amino acid transport protein LIS83_22445 PF01479 S4 domain LIS83_22445 PF00849 RNA pseudouridylate synthase LIS83_22450 PF01713 Smr domain LIS83_22450 PF00488 MutS domain V LIS83_22455 PF14716 Helix-hairpin-helix domain LIS83_22455 PF02811 PHP domain LIS83_22455 PF14791 DNA polymerase beta thumb LIS83_22460 PF02674 Colicin V production protein LIS83_22465 PF05164 Cell division protein ZapA LIS83_22470 PF11858 Domain of unknown function (DUF3378) LIS83_22470 PF01351 Ribonuclease HII LIS83_22490 PF01336 OB-fold nucleic acid binding domain LIS83_22490 PF00152 tRNA synthetases class II (D, K and N) LIS83_22495 PF01588 Putative tRNA binding domain LIS83_22495 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LIS83_22495 PF03484 tRNA synthetase B5 domain LIS83_22495 PF03483 B3/4 domain LIS83_22495 PF03147 Ferredoxin-fold anticodon binding domain LIS83_22500 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LIS83_22500 PF01409 tRNA synthetases class II core domain (F) LIS83_22505 PF00588 SpoU rRNA Methylase family LIS83_22505 PF08032 RNA 2'-O ribose methyltransferase substrate binding LIS83_22510 PF14098 Small, acid-soluble spore protein I LIS83_22515 PF01966 HD domain LIS83_22550 PF07690 Major Facilitator Superfamily LIS83_22560 PF16859 Tetracyclin repressor-like, C-terminal domain LIS83_22560 PF00440 Bacterial regulatory proteins, tetR family LIS83_22565 PF05343 M42 glutamyl aminopeptidase LIS83_22575 PF00453 Ribosomal protein L20 LIS83_22580 PF01632 Ribosomal protein L35 LIS83_22585 PF00707 Translation initiation factor IF-3, C-terminal domain LIS83_22585 PF05198 Translation initiation factor IF-3, N-terminal domain LIS83_22590 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LIS83_22590 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LIS83_22590 PF02824 TGS domain LIS83_22590 PF03129 Anticodon binding domain LIS83_22595 PF08812 YtxC-like family LIS83_22600 PF01695 IstB-like ATP binding protein LIS83_22600 PF07319 Primosomal protein DnaI N-terminus LIS83_22605 PF07261 Replication initiation and membrane attachment LIS83_22610 PF03477 ATP cone domain LIS83_22615 PF02675 S-adenosylmethionine decarboxylase LIS83_22620 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LIS83_22620 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LIS83_22625 PF01121 Dephospho-CoA kinase LIS83_22630 PF02659 Putative manganese efflux pump LIS83_22635 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LIS83_22635 PF06827 Zinc finger found in FPG and IleRS LIS83_22635 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LIS83_22640 PF00476 DNA polymerase family A LIS83_22640 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LIS83_22640 PF01367 5'-3' exonuclease, C-terminal SAM fold LIS83_22645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_22645 PF00512 His Kinase A (phospho-acceptor) domain LIS83_22645 PF00989 PAS fold LIS83_22645 PF16736 Single Cache-like LIS83_22650 PF00072 Response regulator receiver domain LIS83_22650 PF00486 Transcriptional regulatory protein, C terminal LIS83_22665 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LIS83_22665 PF00056 lactate/malate dehydrogenase, NAD binding domain LIS83_22670 PF00180 Isocitrate/isopropylmalate dehydrogenase LIS83_22675 PF00285 Citrate synthase, C-terminal domain LIS83_22680 PF04284 Protein of unknown function (DUF441) LIS83_22685 PF01594 AI-2E family transporter LIS83_22690 PF04186 FxsA cytoplasmic membrane protein LIS83_22695 PF00224 Pyruvate kinase, barrel domain LIS83_22695 PF02887 Pyruvate kinase, alpha/beta domain LIS83_22695 PF00391 PEP-utilising enzyme, mobile domain LIS83_22700 PF00365 Phosphofructokinase LIS83_22705 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LIS83_22710 PF17848 Acetyl-coA carboxylase zinc finger domain LIS83_22710 PF01039 Carboxyl transferase domain LIS83_22715 PF00392 Bacterial regulatory proteins, gntR family LIS83_22720 PF00390 Malic enzyme, N-terminal domain LIS83_22720 PF03949 Malic enzyme, NAD binding domain LIS83_22725 PF07733 Bacterial DNA polymerase III alpha NTPase domain LIS83_22725 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LIS83_22725 PF14579 Helix-hairpin-helix motif LIS83_22725 PF02811 PHP domain LIS83_22725 PF01336 OB-fold nucleic acid binding domain LIS83_22730 PF14034 Sporulation protein YtrH LIS83_22740 PF01368 DHH family LIS83_22740 PF02272 DHHA1 domain LIS83_22745 PF14007 YtpI-like protein LIS83_22760 PF00392 Bacterial regulatory proteins, gntR family LIS83_22760 PF07085 DRTGG domain LIS83_22760 PF00571 CBS domain LIS83_22760 PF03061 Thioesterase superfamily LIS83_22775 PF00557 Metallopeptidase family M24 LIS83_22775 PF01321 Creatinase/Prolidase N-terminal domain LIS83_22820 PF07883 Cupin domain LIS83_22830 PF01381 Helix-turn-helix LIS83_22840 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LIS83_22840 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LIS83_22850 PF00582 Universal stress protein family LIS83_22870 PF14698 Argininosuccinate lyase C-terminal LIS83_22870 PF00206 Lyase LIS83_22875 PF00764 Arginosuccinate synthase LIS83_22890 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LIS83_22890 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LIS83_22895 PF12787 EcsC protein family LIS83_22910 PF00871 Acetokinase family LIS83_22915 PF02384 N-6 DNA Methylase LIS83_22920 PF08534 Redoxin LIS83_22925 PF09579 Sporulation protein YtfJ (Spore_YtfJ) LIS83_22935 PF01513 ATP-NAD kinase LIS83_22940 PF07969 Amidohydrolase family LIS83_22950 PF13193 AMP-binding enzyme C-terminal domain LIS83_22950 PF00501 AMP-binding enzyme LIS83_22955 PF00269 Small, acid-soluble spore proteins, alpha/beta type LIS83_22960 PF02568 Thiamine biosynthesis protein (ThiI) LIS83_22960 PF02926 THUMP domain LIS83_22965 PF00266 Aminotransferase class-V LIS83_22970 PF06160 Septation ring formation regulator, EzrA LIS83_22975 PF03466 LysR substrate binding domain LIS83_22975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIS83_22980 PF00892 EamA-like transporter family LIS83_22985 PF00440 Bacterial regulatory proteins, tetR family LIS83_22990 PF13185 GAF domain LIS83_22995 PF01053 Cys/Met metabolism PLP-dependent enzyme LIS83_23000 PF01479 S4 domain LIS83_23000 PF00163 Ribosomal protein S4/S9 N-terminal domain LIS83_23015 PF00579 tRNA synthetases class I (W and Y) LIS83_23015 PF01479 S4 domain LIS83_23025 PF04542 Sigma-70 region 2 LIS83_23025 PF08281 Sigma-70, region 4 LIS83_23035 PF00501 AMP-binding enzyme LIS83_23035 PF13193 AMP-binding enzyme C-terminal domain LIS83_23040 PF00583 Acetyltransferase (GNAT) family LIS83_23045 PF00571 CBS domain LIS83_23050 PF00850 Histone deacetylase domain LIS83_23065 PF00486 Transcriptional regulatory protein, C terminal LIS83_23065 PF00072 Response regulator receiver domain LIS83_23070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_23070 PF00512 His Kinase A (phospho-acceptor) domain LIS83_23070 PF16736 Single Cache-like LIS83_23070 PF00989 PAS fold LIS83_23075 PF12796 Ankyrin repeats (3 copies) LIS83_23080 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIS83_23085 PF01741 Large-conductance mechanosensitive channel, MscL LIS83_23110 PF00356 Bacterial regulatory proteins, lacI family LIS83_23115 PF07537 CamS sex pheromone cAM373 precursor LIS83_23120 PF11009 Protein of unknown function (DUF2847) LIS83_23130 PF02073 Thermophilic metalloprotease (M29) LIS83_23150 PF02687 FtsX-like permease family LIS83_23155 PF00005 ABC transporter LIS83_23170 PF13302 Acetyltransferase (GNAT) domain LIS83_23175 PF03551 Transcriptional regulator PadR-like family LIS83_23185 PF02875 Mur ligase family, glutamate ligase domain LIS83_23185 PF01225 Mur ligase family, catalytic domain LIS83_23185 PF08245 Mur ligase middle domain LIS83_23195 PF17854 FtsK alpha domain LIS83_23195 PF09397 Ftsk gamma domain LIS83_23195 PF01580 FtsK/SpoIIIE family LIS83_23205 PF14794 Domain of unknown function (DUF4479) LIS83_23205 PF01588 Putative tRNA binding domain LIS83_23210 PF07285 Protein of unknown function (DUF1444) LIS83_23215 PF00085 Thioredoxin LIS83_23220 PF01931 Protein of unknown function DUF84 LIS83_23235 PF00753 Metallo-beta-lactamase superfamily LIS83_23240 PF02390 Putative methyltransferase LIS83_23245 PF14165 YtzH-like protein LIS83_23250 PF01636 Phosphotransferase enzyme family LIS83_23255 PF17999 Pullulanase N1-terminal domain LIS83_23255 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LIS83_23255 PF00128 Alpha amylase, catalytic domain LIS83_23260 PF02834 LigT like Phosphoesterase LIS83_23265 PF01546 Peptidase family M20/M25/M40 LIS83_23270 PF08220 DeoR-like helix-turn-helix domain LIS83_23275 PF00849 RNA pseudouridylate synthase LIS83_23275 PF01479 S4 domain LIS83_23280 PF01943 Polysaccharide biosynthesis protein LIS83_23280 PF14667 Polysaccharide biosynthesis C-terminal domain LIS83_23290 PF07690 Major Facilitator Superfamily LIS83_23295 PF01022 Bacterial regulatory protein, arsR family LIS83_23300 PF08327 Activator of Hsp90 ATPase homolog 1-like protein LIS83_23310 PF10957 Sporulation protein Cse60 LIS83_23320 PF02559 CarD-like/TRCF domain LIS83_23330 PF06800 Sugar transport protein LIS83_23345 PF02391 MoaE protein LIS83_23350 PF03205 Molybdopterin guanine dinucleotide synthesis protein B LIS83_23355 PF00994 Probable molybdopterin binding domain LIS83_23355 PF03454 MoeA C-terminal region (domain IV) LIS83_23355 PF03453 MoeA N-terminal region (domain I and II) LIS83_23360 PF01967 MoaC family LIS83_23365 PF00899 ThiF family LIS83_23370 PF04055 Radical SAM superfamily LIS83_23370 PF06463 Molybdenum Cofactor Synthesis C LIS83_23390 PF00581 Rhodanese-like domain LIS83_23400 PF00561 alpha/beta hydrolase fold LIS83_23405 PF03323 Bacillus/Clostridium GerA spore germination protein LIS83_23410 PF03845 Spore germination protein LIS83_23440 PF08264 Anticodon-binding domain of tRNA LIS83_23440 PF13603 Leucyl-tRNA synthetase, Domain 2 LIS83_23440 PF09334 tRNA synthetases class I (M) LIS83_23440 PF00133 tRNA synthetases class I (I, L, M and V) LIS83_23445 PF07690 Major Facilitator Superfamily LIS83_23450 PF00999 Sodium/hydrogen exchanger family LIS83_23455 PF02080 TrkA-C domain LIS83_23460 PF00589 Phage integrase family LIS83_23470 PF00005 ABC transporter LIS83_23475 PF04235 Protein of unknown function (DUF418) LIS83_23475 PF07786 Protein of unknown function (DUF1624) LIS83_23490 PF16199 Radical_SAM C-terminal domain LIS83_23490 PF04055 Radical SAM superfamily LIS83_23495 PF06962 Putative rRNA methylase LIS83_23500 PF00005 ABC transporter LIS83_23510 PF01177 Asp/Glu/Hydantoin racemase LIS83_23520 PF10026 Predicted Zn-dependent protease (DUF2268) LIS83_23540 PF10776 Protein of unknown function (DUF2600) LIS83_23545 PF12146 Serine aminopeptidase, S33 LIS83_23550 PF00132 Bacterial transferase hexapeptide (six repeats) LIS83_23555 PF01569 PAP2 superfamily LIS83_23560 PF13439 Glycosyltransferase Family 4 LIS83_23560 PF00534 Glycosyl transferases group 1 LIS83_23565 PF12804 MobA-like NTP transferase domain LIS83_23570 PF00994 Probable molybdopterin binding domain LIS83_23590 PF02773 S-adenosylmethionine synthetase, C-terminal domain LIS83_23590 PF02772 S-adenosylmethionine synthetase, central domain LIS83_23590 PF00438 S-adenosylmethionine synthetase, N-terminal domain LIS83_23595 PF01293 Phosphoenolpyruvate carboxykinase LIS83_23635 PF13419 Haloacid dehalogenase-like hydrolase LIS83_23640 PF00455 DeoR C terminal sensor domain LIS83_23640 PF08220 DeoR-like helix-turn-helix domain LIS83_23645 PF13419 Haloacid dehalogenase-like hydrolase LIS83_23650 PF13188 PAS domain LIS83_23650 PF13426 PAS domain LIS83_23650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_23650 PF00512 His Kinase A (phospho-acceptor) domain LIS83_23650 PF00989 PAS fold LIS83_23655 PF08447 PAS fold LIS83_23655 PF00512 His Kinase A (phospho-acceptor) domain LIS83_23655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_23655 PF00989 PAS fold LIS83_23660 PF00561 alpha/beta hydrolase fold LIS83_23660 PF08386 TAP-like protein LIS83_23665 PF00884 Sulfatase LIS83_23685 PF00005 ABC transporter LIS83_23690 PF00528 Binding-protein-dependent transport system inner membrane component LIS83_23715 PF00293 NUDIX domain LIS83_23740 PF02664 S-Ribosylhomocysteinase (LuxS) LIS83_23745 PF01809 Putative membrane protein insertion efficiency factor LIS83_23750 PF00484 Carbonic anhydrase LIS83_23755 PF01654 Cytochrome bd terminal oxidase subunit I LIS83_23760 PF02322 Cytochrome bd terminal oxidase subunit II LIS83_23765 PF10676 Spore germination protein gerPA/gerPF LIS83_23780 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LIS83_23780 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LIS83_23805 PF04012 PspA/IM30 family LIS83_23835 PF00082 Subtilase family LIS83_23835 PF05922 Peptidase inhibitor I9 LIS83_23860 PF07670 Nucleoside recognition LIS83_23860 PF02421 Ferrous iron transport protein B LIS83_23860 PF17910 FeoB cytosolic helical domain LIS83_23860 PF07664 Ferrous iron transport protein B C terminus LIS83_23870 PF09515 Thiamine transporter protein (Thia_YuaJ) LIS83_23875 PF00512 His Kinase A (phospho-acceptor) domain LIS83_23875 PF00672 HAMP domain LIS83_23875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_23880 PF00072 Response regulator receiver domain LIS83_23880 PF00486 Transcriptional regulatory protein, C terminal LIS83_23905 PF00156 Phosphoribosyl transferase domain LIS83_23910 PF00781 Diacylglycerol kinase catalytic domain LIS83_23940 PF09335 SNARE associated Golgi protein LIS83_23945 PF00398 Ribosomal RNA adenine dimethylase LIS83_23950 PF02687 FtsX-like permease family LIS83_23955 PF00005 ABC transporter LIS83_23960 PF12833 Helix-turn-helix domain LIS83_23960 PF06445 GyrI-like small molecule binding domain LIS83_23965 PF00072 Response regulator receiver domain LIS83_23965 PF00486 Transcriptional regulatory protein, C terminal LIS83_23970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_23975 PF02687 FtsX-like permease family LIS83_23980 PF02687 FtsX-like permease family LIS83_23985 PF00005 ABC transporter LIS83_23990 PF02687 FtsX-like permease family LIS83_24000 PF02447 GntP family permease LIS83_24005 PF07702 UTRA domain LIS83_24005 PF00392 Bacterial regulatory proteins, gntR family LIS83_24015 PF07071 KDGP aldolase LIS83_24020 PF03841 L-seryl-tRNA selenium transferase LIS83_24025 PF01979 Amidohydrolase family LIS83_24030 PF02557 D-alanyl-D-alanine carboxypeptidase LIS83_24035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_24035 PF00512 His Kinase A (phospho-acceptor) domain LIS83_24040 PF00486 Transcriptional regulatory protein, C terminal LIS83_24040 PF00072 Response regulator receiver domain LIS83_24045 PF13378 Enolase C-terminal domain-like LIS83_24045 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LIS83_24050 PF00501 AMP-binding enzyme LIS83_24050 PF13193 AMP-binding enzyme C-terminal domain LIS83_24055 PF00378 Enoyl-CoA hydratase/isomerase LIS83_24060 PF00561 alpha/beta hydrolase fold LIS83_24065 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LIS83_24065 PF16582 Middle domain of thiamine pyrophosphate LIS83_24065 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LIS83_24070 PF00425 chorismate binding enzyme LIS83_24075 PF01040 UbiA prenyltransferase family LIS83_24080 PF01258 Prokaryotic dksA/traR C4-type zinc finger LIS83_24085 PF00313 'Cold-shock' DNA-binding domain LIS83_24100 PF00343 Carbohydrate phosphorylase LIS83_24105 PF08323 Starch synthase catalytic domain LIS83_24105 PF00534 Glycosyl transferases group 1 LIS83_24110 PF00483 Nucleotidyl transferase LIS83_24115 PF00483 Nucleotidyl transferase LIS83_24120 PF02806 Alpha amylase, C-terminal all-beta domain LIS83_24120 PF00128 Alpha amylase, catalytic domain LIS83_24120 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LIS83_24130 PF13860 FlgD Ig-like domain LIS83_24130 PF05922 Peptidase inhibitor I9 LIS83_24130 PF00082 Subtilase family LIS83_24130 PF02225 PA domain LIS83_24135 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LIS83_24135 PF00056 lactate/malate dehydrogenase, NAD binding domain LIS83_24230 PF05697 Bacterial trigger factor protein (TF) LIS83_24230 PF05698 Bacterial trigger factor protein (TF) C-terminus LIS83_24265 PF02308 MgtC family LIS83_24270 PF07885 Ion channel LIS83_24270 PF02254 TrkA-N domain LIS83_24275 PF08868 YugN-like family LIS83_24280 PF00342 Phosphoglucose isomerase LIS83_24285 PF04070 Domain of unknown function (DUF378) LIS83_24290 PF00575 S1 RNA binding domain LIS83_24295 PF00155 Aminotransferase class I and II LIS83_24300 PF01037 Lrp/AsnC ligand binding domain LIS83_24305 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LIS83_24305 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LIS83_24310 PF08386 TAP-like protein LIS83_24310 PF00561 alpha/beta hydrolase fold LIS83_24320 PF00155 Aminotransferase class I and II LIS83_24335 PF08810 Kinase associated protein B LIS83_24340 PF00929 Exonuclease LIS83_24345 PF03600 Citrate transporter LIS83_24360 PF03129 Anticodon binding domain LIS83_24360 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LIS83_24365 PF03061 Thioesterase superfamily LIS83_24375 PF02632 BioY family LIS83_24380 PF00483 Nucleotidyl transferase LIS83_24385 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LIS83_24385 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LIS83_24385 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LIS83_24385 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LIS83_24390 PF02457 DisA bacterial checkpoint controller nucleotide-binding LIS83_24390 PF10372 Bacterial membrane-spanning protein N-terminus LIS83_24395 PF00883 Cytosol aminopeptidase family, catalytic domain LIS83_24395 PF02789 Cytosol aminopeptidase family, N-terminal domain LIS83_24400 PF06725 3D domain LIS83_24410 PF00293 NUDIX domain LIS83_24410 PF13344 Haloacid dehalogenase-like hydrolase LIS83_24415 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIS83_24420 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIS83_24430 PF06445 GyrI-like small molecule binding domain LIS83_24445 PF04463 Protein of unknown function (DUF523) LIS83_24470 PF01510 N-acetylmuramoyl-L-alanine amidase LIS83_24675 PF01726 LexA DNA binding domain LIS83_24675 PF00717 Peptidase S24-like LIS83_24690 PF01521 Iron-sulphur cluster biosynthesis LIS83_24695 PF01678 Diaminopimelate epimerase LIS83_24700 PF07293 Protein of unknown function (DUF1450) LIS83_24705 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIS83_24715 PF00664 ABC transporter transmembrane region LIS83_24715 PF00005 ABC transporter LIS83_24715 PF03412 Peptidase C39 family LIS83_24720 PF03649 Uncharacterised protein family (UPF0014) LIS83_24725 PF08274 PhnA Zinc-Ribbon LIS83_24725 PF03831 PhnA domain LIS83_24740 PF13427 Domain of unknown function (DUF4111) LIS83_24740 PF01909 Nucleotidyltransferase domain LIS83_24745 PF07315 Protein of unknown function (DUF1462) LIS83_24750 PF01106 NifU-like domain LIS83_24765 PF04608 Phosphatidylglycerophosphatase A LIS83_24780 PF00005 ABC transporter LIS83_24780 PF02687 FtsX-like permease family LIS83_24780 PF12704 MacB-like periplasmic core domain LIS83_24785 PF02525 Flavodoxin-like fold LIS83_24790 PF13344 Haloacid dehalogenase-like hydrolase LIS83_24800 PF01934 Protein of unknown function DUF86 LIS83_24805 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded LIS83_24820 PF06265 Protein of unknown function (DUF1027) LIS83_24825 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) LIS83_24830 PF13411 MerR HTH family regulatory protein LIS83_24830 PF07739 TipAS antibiotic-recognition domain LIS83_24835 PF10086 YhfC intramembrane metalloprotease LIS83_24855 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LIS83_24855 PF04055 Radical SAM superfamily LIS83_24860 PF01551 Peptidase family M23 LIS83_24870 PF08827 Domain of unknown function (DUF1805) LIS83_24875 PF02872 5'-nucleotidase, C-terminal domain LIS83_24880 PF03551 Transcriptional regulator PadR-like family LIS83_24885 PF04892 VanZ like family LIS83_24890 PF01458 Uncharacterized protein family (UPF0051) LIS83_24895 PF01592 NifU-like N terminal domain LIS83_24900 PF00266 Aminotransferase class-V LIS83_24905 PF01458 Uncharacterized protein family (UPF0051) LIS83_24910 PF00005 ABC transporter LIS83_24915 PF03180 NLPA lipoprotein LIS83_24920 PF03180 NLPA lipoprotein LIS83_24925 PF00528 Binding-protein-dependent transport system inner membrane component LIS83_24930 PF00005 ABC transporter LIS83_24930 PF09383 NIL domain LIS83_24940 PF00085 Thioredoxin LIS83_24945 PF01751 Toprim domain LIS83_24950 PF01597 Glycine cleavage H-protein LIS83_24955 PF03960 ArsC family LIS83_25005 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LIS83_25005 PF00056 lactate/malate dehydrogenase, NAD binding domain LIS83_25030 PF13305 Tetracyclin repressor-like, C-terminal domain LIS83_25030 PF00440 Bacterial regulatory proteins, tetR family LIS83_25035 PF00753 Metallo-beta-lactamase superfamily LIS83_25045 PF00005 ABC transporter LIS83_25070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LIS83_25070 PF02770 Acyl-CoA dehydrogenase, middle domain LIS83_25070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LIS83_25075 PF02803 Thiolase, C-terminal domain LIS83_25075 PF00108 Thiolase, N-terminal domain LIS83_25080 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LIS83_25080 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LIS83_25080 PF00378 Enoyl-CoA hydratase/isomerase LIS83_25085 PF14115 YuzL-like protein LIS83_25090 PF07943 Penicillin-binding protein 5, C-terminal domain LIS83_25090 PF00768 D-alanyl-D-alanine carboxypeptidase LIS83_25095 PF01619 Proline dehydrogenase LIS83_25100 PF10835 Protein of unknown function (DUF2573) LIS83_25105 PF01910 Thiamine-binding protein LIS83_25110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LIS83_25110 PF00672 HAMP domain LIS83_25110 PF02743 Cache domain LIS83_25130 PF07690 Major Facilitator Superfamily LIS83_25135 PF13520 Amino acid permease LIS83_25150 PF02096 60Kd inner membrane protein LIS83_25160 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LIS83_25160 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LIS83_25195 PF09335 SNARE associated Golgi protein LIS83_25205 PF03734 L,D-transpeptidase catalytic domain LIS83_25205 PF17969 L,D-transpeptidase C-terminal domain LIS83_25210 PF00072 Response regulator receiver domain LIS83_25210 PF00486 Transcriptional regulatory protein, C terminal LIS83_25215 PF00989 PAS fold LIS83_25215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_25215 PF16736 Single Cache-like LIS83_25215 PF00512 His Kinase A (phospho-acceptor) domain LIS83_25225 PF08264 Anticodon-binding domain of tRNA LIS83_25225 PF09334 tRNA synthetases class I (M) LIS83_25235 PF02743 Cache domain LIS83_25235 PF00672 HAMP domain LIS83_25235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LIS83_25240 PF00672 HAMP domain LIS83_25240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LIS83_25240 PF02743 Cache domain LIS83_25245 PF01883 Iron-sulfur cluster assembly protein LIS83_25250 PF03413 Peptidase propeptide and YPEB domain LIS83_25250 PF02868 Thermolysin metallopeptidase, alpha-helical domain LIS83_25250 PF07504 Fungalysin/Thermolysin Propeptide Motif LIS83_25250 PF01447 Thermolysin metallopeptidase, catalytic domain LIS83_25255 PF02678 Pirin LIS83_25255 PF17954 Quercetinase C-terminal cupin domain LIS83_25260 PF01047 MarR family LIS83_25270 PF00999 Sodium/hydrogen exchanger family LIS83_25275 PF02080 TrkA-C domain LIS83_25280 PF01235 Sodium:alanine symporter family LIS83_25285 PF00210 Ferritin-like domain LIS83_25300 PF03641 Possible lysine decarboxylase LIS83_25310 PF00210 Ferritin-like domain LIS83_25320 PF01773 Na+ dependent nucleoside transporter N-terminus LIS83_25320 PF07662 Na+ dependent nucleoside transporter C-terminus LIS83_25325 PF01773 Na+ dependent nucleoside transporter N-terminus LIS83_25325 PF07662 Na+ dependent nucleoside transporter C-terminus LIS83_25330 PF01235 Sodium:alanine symporter family LIS83_25335 PF01235 Sodium:alanine symporter family LIS83_25340 PF13460 NAD(P)H-binding LIS83_25355 PF00248 Aldo/keto reductase family LIS83_25360 PF07690 Major Facilitator Superfamily LIS83_25365 PF01638 HxlR-like helix-turn-helix LIS83_25370 PF07849 Protein of unknown function (DUF1641) LIS83_25375 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIS83_25380 PF01479 S4 domain LIS83_25380 PF00579 tRNA synthetases class I (W and Y) LIS83_25385 PF01565 FAD binding domain LIS83_25385 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LIS83_25395 PF00672 HAMP domain LIS83_25395 PF17202 Single cache domain 3 LIS83_25395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LIS83_25405 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LIS83_25410 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LIS83_25425 PF07690 Major Facilitator Superfamily LIS83_25430 PF00005 ABC transporter LIS83_25430 PF12848 ABC transporter LIS83_25435 PF13302 Acetyltransferase (GNAT) domain LIS83_25440 PF06146 Phosphate-starvation-inducible E LIS83_25455 PF00005 ABC transporter LIS83_25460 PF01032 FecCD transport family LIS83_25465 PF01032 FecCD transport family LIS83_25475 PF00486 Transcriptional regulatory protein, C terminal LIS83_25475 PF00072 Response regulator receiver domain LIS83_25485 PF01668 SmpB protein LIS83_25490 PF17876 Cold shock domain LIS83_25490 PF08206 Ribonuclease B OB domain LIS83_25490 PF00773 RNB domain LIS83_25490 PF00575 S1 RNA binding domain LIS83_25495 PF12146 Serine aminopeptidase, S33 LIS83_25500 PF03840 Preprotein translocase SecG subunit LIS83_25505 PF04172 LrgB-like family LIS83_25510 PF03788 LrgA family LIS83_25515 PF01156 Inosine-uridine preferring nucleoside hydrolase LIS83_25520 PF03952 Enolase, N-terminal domain LIS83_25520 PF00113 Enolase, C-terminal TIM barrel domain LIS83_25595 PF04860 Phage portal protein LIS83_25615 PF02899 Phage integrase, N-terminal SAM-like domain LIS83_25615 PF00589 Phage integrase family LIS83_25620 PF00113 Enolase, C-terminal TIM barrel domain LIS83_25620 PF03952 Enolase, N-terminal domain LIS83_25625 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LIS83_25625 PF01676 Metalloenzyme superfamily LIS83_25630 PF00121 Triosephosphate isomerase LIS83_25635 PF00162 Phosphoglycerate kinase LIS83_25640 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LIS83_25640 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LIS83_25645 PF04198 Putative sugar-binding domain LIS83_25655 PF04552 Sigma-54, DNA binding domain LIS83_25655 PF00309 Sigma-54 factor, Activator interacting domain (AID) LIS83_25655 PF04963 Sigma-54 factor, core binding domain LIS83_25675 PF03862 SpoVAC/SpoVAEB sporulation membrane protein LIS83_25680 PF07451 Stage V sporulation protein AD (SpoVAD) LIS83_25685 PF03862 SpoVAC/SpoVAEB sporulation membrane protein LIS83_25695 PF04239 Protein of unknown function (DUF421) LIS83_25700 PF00574 Clp protease LIS83_25705 PF00381 PTS HPr component phosphorylation site LIS83_25710 PF02650 WhiA C-terminal HTH domain LIS83_25710 PF14527 WhiA LAGLIDADG-like domain LIS83_25710 PF10298 WhiA N-terminal LAGLIDADG-like domain LIS83_25715 PF01933 Uncharacterised protein family UPF0052 LIS83_25720 PF03668 P-loop ATPase protein family LIS83_25725 PF00293 NUDIX domain LIS83_25735 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIS83_25745 PF14602 Hexapeptide repeat of succinyl-transferase LIS83_25750 PF13419 Haloacid dehalogenase-like hydrolase LIS83_25755 PF01790 Prolipoprotein diacylglyceryl transferase LIS83_25760 PF07475 HPr Serine kinase C-terminal domain LIS83_25760 PF02603 HPr Serine kinase N terminus LIS83_25765 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV LIS83_25775 PF00005 ABC transporter LIS83_25775 PF17760 UvrA interaction domain LIS83_25775 PF17755 UvrA DNA-binding domain LIS83_25780 PF02151 UvrB/uvrC motif LIS83_25780 PF04851 Type III restriction enzyme, res subunit LIS83_25780 PF00271 Helicase conserved C-terminal domain LIS83_25780 PF17757 UvrB interaction domain LIS83_25780 PF12344 Ultra-violet resistance protein B LIS83_25795 PF07739 TipAS antibiotic-recognition domain LIS83_25795 PF13411 MerR HTH family regulatory protein LIS83_25820 PF03601 Conserved hypothetical protein 698 LIS83_25825 PF03466 LysR substrate binding domain LIS83_25825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIS83_25830 PF00376 MerR family regulatory protein LIS83_25830 PF09278 MerR, DNA binding LIS83_25835 PF03358 NADPH-dependent FMN reductase LIS83_25840 PF12848 ABC transporter LIS83_25840 PF16326 ABC transporter C-terminal domain LIS83_25840 PF00005 ABC transporter LIS83_25845 PF01906 Putative heavy-metal-binding LIS83_25850 PF00005 ABC transporter LIS83_25850 PF00664 ABC transporter transmembrane region LIS83_25855 PF17820 PDZ domain LIS83_25860 PF03572 Peptidase family S41 LIS83_25860 PF01471 Putative peptidoglycan binding domain LIS83_25860 PF17820 PDZ domain LIS83_25865 PF02687 FtsX-like permease family LIS83_25865 PF18075 FtsX extracellular domain LIS83_25870 PF00005 ABC transporter LIS83_25875 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LIS83_25885 PF01043 SecA preprotein cross-linking domain LIS83_25885 PF02810 SEC-C motif LIS83_25885 PF07516 SecA Wing and Scaffold domain LIS83_25885 PF07517 SecA DEAD-like domain LIS83_25890 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LIS83_25890 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus LIS83_25895 PF00313 'Cold-shock' DNA-binding domain LIS83_25905 PF04851 Type III restriction enzyme, res subunit LIS83_25905 PF00271 Helicase conserved C-terminal domain LIS83_25910 PF00877 NlpC/P60 family LIS83_25910 PF01476 LysM domain LIS83_25915 PF01638 HxlR-like helix-turn-helix LIS83_25920 PF02645 Uncharacterised protein, DegV family COG1307 LIS83_25925 PF01205 Uncharacterized protein family UPF0029 LIS83_25925 PF09186 Domain of unknown function (DUF1949) LIS83_25930 PF03816 Cell envelope-related transcriptional attenuator domain LIS83_25935 PF02350 UDP-N-acetylglucosamine 2-epimerase LIS83_25940 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LIS83_25940 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LIS83_25940 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LIS83_25945 PF00953 Glycosyl transferase family 4 LIS83_25950 PF01522 Polysaccharide deacetylase LIS83_25955 PF00874 PRD domain LIS83_25955 PF00158 Sigma-54 interaction domain LIS83_25955 PF03610 PTS system fructose IIA component LIS83_25965 PF02417 Chromate transporter LIS83_25970 PF04794 YdjC-like protein LIS83_25975 PF02056 Family 4 glycosyl hydrolase LIS83_25975 PF11975 Family 4 glycosyl hydrolase C-terminal domain LIS83_25980 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LIS83_25985 PF02378 Phosphotransferase system, EIIC LIS83_25990 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LIS83_26000 PF02675 S-adenosylmethionine decarboxylase LIS83_26015 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LIS83_26020 PF02378 Phosphotransferase system, EIIC LIS83_26025 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LIS83_26030 PF00375 Sodium:dicarboxylate symporter family LIS83_26040 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LIS83_26065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIS83_26065 PF03466 LysR substrate binding domain LIS83_26080 PF01654 Cytochrome bd terminal oxidase subunit I LIS83_26085 PF02322 Cytochrome bd terminal oxidase subunit II LIS83_26090 PF02040 Arsenical pump membrane protein LIS83_26095 PF13667 ThiC-associated domain LIS83_26095 PF01964 Radical SAM ThiC family LIS83_26100 PF02652 L-lactate permease LIS83_26105 PF01385 Probable transposase LIS83_26105 PF12323 Helix-turn-helix domain LIS83_26105 PF07282 Putative transposase DNA-binding domain LIS83_26115 PF09988 Uncharacterized metal-binding protein (DUF2227) LIS83_26125 PF00884 Sulfatase LIS83_26130 PF01063 Amino-transferase class IV LIS83_26135 PF01476 LysM domain LIS83_26135 PF00877 NlpC/P60 family LIS83_26140 PF07662 Na+ dependent nucleoside transporter C-terminus LIS83_26140 PF01773 Na+ dependent nucleoside transporter N-terminus LIS83_26155 PF02028 BCCT, betaine/carnitine/choline family transporter LIS83_26160 PF06725 3D domain LIS83_26160 PF01476 LysM domain LIS83_26185 PF04434 SWIM zinc finger LIS83_26190 PF12419 SNF2 Helicase protein LIS83_26190 PF00271 Helicase conserved C-terminal domain LIS83_26190 PF00176 SNF2 family N-terminal domain LIS83_26220 PF04545 Sigma-70, region 4 LIS83_26220 PF04542 Sigma-70 region 2 LIS83_26225 PF04893 Yip1 domain LIS83_26230 PF04893 Yip1 domain LIS83_26235 PF12704 MacB-like periplasmic core domain LIS83_26235 PF02687 FtsX-like permease family LIS83_26240 PF00005 ABC transporter LIS83_26260 PF07690 Major Facilitator Superfamily LIS83_26275 PF18719 ArlS sensor domain LIS83_26275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_26275 PF00512 His Kinase A (phospho-acceptor) domain LIS83_26280 PF00072 Response regulator receiver domain LIS83_26280 PF00486 Transcriptional regulatory protein, C terminal LIS83_26285 PF01238 Phosphomannose isomerase type I LIS83_26290 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LIS83_26290 PF02378 Phosphotransferase system, EIIC LIS83_26290 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LIS83_26295 PF08279 HTH domain LIS83_26295 PF05043 Mga helix-turn-helix domain LIS83_26295 PF00874 PRD domain LIS83_26295 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LIS83_26300 PF16363 GDP-mannose 4,6 dehydratase LIS83_26310 PF03816 Cell envelope-related transcriptional attenuator domain LIS83_26315 PF01238 Phosphomannose isomerase type I LIS83_26325 PF01050 Mannose-6-phosphate isomerase LIS83_26325 PF00483 Nucleotidyl transferase LIS83_26330 PF03808 Glycosyl transferase WecB/TagA/CpsF family LIS83_26335 PF00534 Glycosyl transferases group 1 LIS83_26340 PF13439 Glycosyltransferase Family 4 LIS83_26340 PF00534 Glycosyl transferases group 1 LIS83_26360 PF16363 GDP-mannose 4,6 dehydratase LIS83_26365 PF01370 NAD dependent epimerase/dehydratase family LIS83_26370 PF02397 Bacterial sugar transferase LIS83_26375 PF00483 Nucleotidyl transferase LIS83_26385 PF13614 AAA domain LIS83_26390 PF13807 G-rich domain on putative tyrosine kinase LIS83_26390 PF02706 Chain length determinant protein LIS83_26395 PF13614 AAA domain LIS83_26400 PF07977 FabA-like domain LIS83_26410 PF12116 Stage III sporulation protein D LIS83_26420 PF01551 Peptidase family M23 LIS83_26430 PF00005 ABC transporter LIS83_26435 PF04397 LytTr DNA-binding domain LIS83_26435 PF00072 Response regulator receiver domain LIS83_26440 PF08486 Stage II sporulation protein LIS83_26445 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LIS83_26455 PF06612 Protein of unknown function (DUF1146) LIS83_26460 PF00361 Proton-conducting membrane transporter LIS83_26465 PF00361 Proton-conducting membrane transporter LIS83_26470 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus LIS83_26470 PF00361 Proton-conducting membrane transporter LIS83_26470 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LIS83_26475 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LIS83_26480 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LIS83_26490 PF00146 NADH dehydrogenase LIS83_26495 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LIS83_26500 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LIS83_26505 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LIS83_26510 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LIS83_26515 PF03707 Bacterial signalling protein N terminal repeat LIS83_26515 PF00990 Diguanylate cyclase, GGDEF domain LIS83_26515 PF00563 EAL domain LIS83_26530 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LIS83_26530 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LIS83_26535 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LIS83_26535 PF02874 ATP synthase alpha/beta family, beta-barrel domain LIS83_26540 PF00231 ATP synthase LIS83_26545 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LIS83_26545 PF00306 ATP synthase alpha/beta chain, C terminal domain LIS83_26545 PF02874 ATP synthase alpha/beta family, beta-barrel domain LIS83_26550 PF00213 ATP synthase delta (OSCP) subunit LIS83_26555 PF00430 ATP synthase B/B' CF(0) LIS83_26560 PF00137 ATP synthase subunit C LIS83_26565 PF00119 ATP synthase A chain LIS83_26570 PF03899 ATP synthase I chain LIS83_26590 PF00464 Serine hydroxymethyltransferase LIS83_26595 PF04260 Protein of unknown function (DUF436) LIS83_26600 PF02502 Ribose/Galactose Isomerase LIS83_26605 PF01451 Low molecular weight phosphotyrosine protein phosphatase LIS83_26610 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LIS83_26615 PF07681 DoxX LIS83_26620 PF01613 Flavin reductase like domain LIS83_26635 PF02659 Putative manganese efflux pump LIS83_26640 PF03481 Putative GTP-binding controlling metal-binding LIS83_26640 PF01300 Telomere recombination LIS83_26650 PF09551 Stage II sporulation protein R (spore_II_R) LIS83_26655 PF13847 Methyltransferase domain LIS83_26655 PF17827 PrmC N-terminal domain LIS83_26660 PF03462 PCRF domain LIS83_26660 PF00472 RF-1 domain LIS83_26665 PF00265 Thymidine kinase LIS83_26670 PF01197 Ribosomal protein L31 LIS83_26675 PF07497 Rho termination factor, RNA-binding domain LIS83_26675 PF07498 Rho termination factor, N-terminal domain LIS83_26675 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LIS83_26680 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded LIS83_26685 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LIS83_26690 PF01116 Fructose-bisphosphate aldolase class-II LIS83_26695 PF00072 Response regulator receiver domain LIS83_26700 PF10740 Domain of unknown function (DUF2529) LIS83_26705 PF06418 CTP synthase N-terminus LIS83_26705 PF00117 Glutamine amidotransferase class-I LIS83_26710 PF05066 HB1, ASXL, restriction endonuclease HTH domain LIS83_26720 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LIS83_26720 PF02770 Acyl-CoA dehydrogenase, middle domain LIS83_26720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LIS83_26725 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LIS83_26725 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LIS83_26725 PF02770 Acyl-CoA dehydrogenase, middle domain LIS83_26730 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LIS83_26730 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LIS83_26735 PF02803 Thiolase, C-terminal domain LIS83_26735 PF00108 Thiolase, N-terminal domain LIS83_26740 PF02754 Cysteine-rich domain LIS83_26740 PF13183 4Fe-4S dicluster domain LIS83_26745 PF13091 PLD-like domain LIS83_26750 PF03851 UV-endonuclease UvdE LIS83_26755 PF00990 Diguanylate cyclase, GGDEF domain LIS83_26755 PF03707 Bacterial signalling protein N terminal repeat LIS83_26755 PF00563 EAL domain LIS83_26775 PF00196 Bacterial regulatory proteins, luxR family LIS83_26775 PF00072 Response regulator receiver domain LIS83_26780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_26780 PF07730 Histidine kinase LIS83_26790 PF00005 ABC transporter LIS83_26795 PF00557 Metallopeptidase family M24 LIS83_26805 PF02225 PA domain LIS83_26805 PF04389 Peptidase family M28 LIS83_26825 PF04542 Sigma-70 region 2 LIS83_26825 PF08281 Sigma-70, region 4 LIS83_26830 PF03485 Arginyl tRNA synthetase N terminal domain LIS83_26830 PF05746 DALR anticodon binding domain LIS83_26830 PF00750 tRNA synthetases class I (R) LIS83_26835 PF09148 Domain of unknown function (DUF1934) LIS83_26840 PF02016 LD-carboxypeptidase N-terminal domain LIS83_26840 PF17676 LD-carboxypeptidase C-terminal domain LIS83_26855 PF00491 Arginase family LIS83_26860 PF17284 Spermidine synthase tetramerisation domain LIS83_26865 PF07690 Major Facilitator Superfamily LIS83_26870 PF13411 MerR HTH family regulatory protein LIS83_26875 PF03009 Glycerophosphoryl diester phosphodiesterase family LIS83_26880 PF00912 Transglycosylase LIS83_26880 PF00905 Penicillin binding protein transpeptidase domain LIS83_26885 PF08741 YwhD family LIS83_26890 PF02163 Peptidase family M50 LIS83_26895 PF01361 Tautomerase enzyme LIS83_26900 PF01966 HD domain LIS83_26905 PF01497 Periplasmic binding protein LIS83_26910 PF00005 ABC transporter LIS83_26915 PF01032 FecCD transport family LIS83_26920 PF01032 FecCD transport family LIS83_26925 PF07293 Protein of unknown function (DUF1450) LIS83_26940 PF03099 Biotin/lipoate A/B protein ligase family LIS83_26945 PF01515 Phosphate acetyl/butaryl transferase LIS83_26950 PF06778 Chlorite dismutase LIS83_26955 PF07943 Penicillin-binding protein 5, C-terminal domain LIS83_26955 PF00768 D-alanyl-D-alanine carboxypeptidase LIS83_26960 PF07486 Cell Wall Hydrolase LIS83_26965 PF09671 Spore coat protein (Spore_GerQ) LIS83_26970 PF04241 Protein of unknown function (DUF423) LIS83_26980 PF02254 TrkA-N domain LIS83_26980 PF07885 Ion channel LIS83_26985 PF00860 Permease family LIS83_26995 PF12823 Domain of unknown function (DUF3817) LIS83_27000 PF03167 Uracil DNA glycosylase superfamily LIS83_27005 PF12679 ABC-2 family transporter protein LIS83_27010 PF00005 ABC transporter LIS83_27015 PF13472 GDSL-like Lipase/Acylhydrolase family LIS83_27020 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LIS83_27020 PF00356 Bacterial regulatory proteins, lacI family LIS83_27030 PF03447 Homoserine dehydrogenase, NAD binding domain LIS83_27030 PF00742 Homoserine dehydrogenase LIS83_27030 PF01842 ACT domain LIS83_27035 PF04204 Homoserine O-succinyltransferase LIS83_27040 PF01053 Cys/Met metabolism PLP-dependent enzyme LIS83_27045 PF13419 Haloacid dehalogenase-like hydrolase LIS83_27055 PF12323 Helix-turn-helix domain LIS83_27055 PF01385 Probable transposase LIS83_27055 PF07282 Putative transposase DNA-binding domain LIS83_27060 PF00027 Cyclic nucleotide-binding domain LIS83_27065 PF02525 Flavodoxin-like fold LIS83_27070 PF00072 Response regulator receiver domain LIS83_27070 PF00196 Bacterial regulatory proteins, luxR family LIS83_27075 PF07730 Histidine kinase LIS83_27075 PF13185 GAF domain LIS83_27080 PF08543 Phosphomethylpyrimidine kinase LIS83_27085 PF07694 5TMR of 5TMR-LYT LIS83_27085 PF00990 Diguanylate cyclase, GGDEF domain LIS83_27090 PF04328 Selenoprotein, putative LIS83_27095 PF13722 5TM C-terminal transporter carbon starvation CstA LIS83_27095 PF02554 Carbon starvation protein CstA LIS83_27100 PF00072 Response regulator receiver domain LIS83_27100 PF04397 LytTr DNA-binding domain LIS83_27105 PF07690 Major Facilitator Superfamily LIS83_27110 PF03808 Glycosyl transferase WecB/TagA/CpsF family LIS83_27125 PF03458 UPF0126 domain LIS83_27130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LIS83_27140 PF03061 Thioesterase superfamily LIS83_27150 PF00535 Glycosyl transferase family 2 LIS83_27155 PF12848 ABC transporter LIS83_27155 PF00005 ABC transporter LIS83_27175 PF00535 Glycosyl transferase family 2 LIS83_27180 PF00440 Bacterial regulatory proteins, tetR family LIS83_27185 PF00873 AcrB/AcrD/AcrF family LIS83_27190 PF01641 SelR domain LIS83_27190 PF01625 Peptide methionine sulfoxide reductase LIS83_27195 PF01594 AI-2E family transporter LIS83_27200 PF04172 LrgB-like family LIS83_27205 PF03788 LrgA family LIS83_27210 PF00072 Response regulator receiver domain LIS83_27210 PF04397 LytTr DNA-binding domain LIS83_27215 PF07694 5TMR of 5TMR-LYT LIS83_27215 PF06580 Histidine kinase LIS83_27215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_27215 PF13492 GAF domain LIS83_27220 PF07690 Major Facilitator Superfamily LIS83_27225 PF02028 BCCT, betaine/carnitine/choline family transporter LIS83_27230 PF02898 Nitric oxide synthase, oxygenase domain LIS83_27235 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LIS83_27235 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LIS83_27245 PF02293 AmiS/UreI family transporter LIS83_27255 PF16363 GDP-mannose 4,6 dehydratase LIS83_27260 PF03006 Haemolysin-III related LIS83_27270 PF00270 DEAD/DEAH box helicase LIS83_27270 PF03880 DbpA RNA binding domain LIS83_27270 PF00271 Helicase conserved C-terminal domain LIS83_27280 PF00478 IMP dehydrogenase / GMP reductase domain LIS83_27285 PF01432 Peptidase family M3 LIS83_27285 PF08439 Oligopeptidase F LIS83_27295 PF02590 Predicted SPOUT methyltransferase LIS83_27305 PF13180 PDZ domain LIS83_27310 PF00753 Metallo-beta-lactamase superfamily LIS83_27315 PF09648 YycH protein LIS83_27320 PF07435 YycH protein LIS83_27325 PF13426 PAS domain LIS83_27325 PF00512 His Kinase A (phospho-acceptor) domain LIS83_27325 PF00672 HAMP domain LIS83_27325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIS83_27330 PF00486 Transcriptional regulatory protein, C terminal LIS83_27330 PF00072 Response regulator receiver domain LIS83_27355 PF00709 Adenylosuccinate synthetase LIS83_27360 PF03796 DnaB-like helicase C terminal domain LIS83_27360 PF00772 DnaB-like helicase N terminal domain LIS83_27365 PF01281 Ribosomal protein L9, N-terminal domain LIS83_27365 PF03948 Ribosomal protein L9, C-terminal domain LIS83_27370 PF01368 DHH family LIS83_27370 PF02272 DHHA1 domain LIS83_27375 PF09991 Predicted membrane protein (DUF2232) LIS83_27380 PF01084 Ribosomal protein S18 LIS83_27385 PF00436 Single-strand binding protein family LIS83_27390 PF01250 Ribosomal protein S6 LIS83_27395 PF01926 50S ribosome-binding GTPase LIS83_27395 PF06071 Protein of unknown function (DUF933) LIS83_27400 PF06107 Bacterial protein of unknown function (DUF951) LIS83_27405 PF00924 Mechanosensitive ion channel LIS83_27410 PF06866 Protein of unknown function (DUF1256) LIS83_27415 PF02195 ParB-like nuclease domain LIS83_27415 PF17762 HTH domain found in ParB protein LIS83_27420 PF13614 AAA domain LIS83_27425 PF02195 ParB-like nuclease domain LIS83_27425 PF17762 HTH domain found in ParB protein LIS83_27430 PF02527 rRNA small subunit methyltransferase G LIS83_27435 PF01134 Glucose inhibited division protein A LIS83_27435 PF13932 GidA associated domain LIS83_27440 PF01926 50S ribosome-binding GTPase LIS83_27440 PF10396 GTP-binding protein TrmE N-terminus LIS83_27440 PF12631 MnmE helical domain LIS83_27445 PF14804 Jag N-terminus LIS83_27445 PF01424 R3H domain LIS83_27450 PF02096 60Kd inner membrane protein LIS83_27455 PF00825 Ribonuclease P LIS83_27460 PF00468 Ribosomal protein L34 LIS83_27470 PF00216 Bacterial DNA-binding protein LIS83_27485 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LIS83_27485 PF18277 AbrB C-terminal domain LIS83_27495 PF02899 Phage integrase, N-terminal SAM-like domain LIS83_27495 PF00589 Phage integrase family LIS83_27525 PF04740 LXG domain of WXG superfamily LIS83_27525 PF14436 Bacterial EndoU nuclease LIS83_27545 PF01022 Bacterial regulatory protein, arsR family LIS83_27550 PF01526 Tn3 transposase DDE domain LIS83_27550 PF13700 Domain of unknown function (DUF4158) LIS83_27555 PF02796 Helix-turn-helix domain of resolvase LIS83_27555 PF00239 Resolvase, N terminal domain LIS83_27560 PF07690 Major Facilitator Superfamily LIS83_27575 PF01609 Transposase DDE domain LIS83_27580 PF13700 Domain of unknown function (DUF4158) LIS83_27580 PF01526 Tn3 transposase DDE domain LIS83_27585 PF00239 Resolvase, N terminal domain LIS83_27585 PF02796 Helix-turn-helix domain of resolvase LIS83_27590 PF06445 GyrI-like small molecule binding domain LIS83_27590 PF12833 Helix-turn-helix domain LIS83_27595 PF03845 Spore germination protein LIS83_27600 PF03323 Bacillus/Clostridium GerA spore germination protein LIS83_27610 PF05504 Spore germination B3/ GerAC like, C-terminal LIS83_27620 PF00857 Isochorismatase family LIS83_27625 PF13529 Peptidase_C39 like family LIS83_27630 PF00486 Transcriptional regulatory protein, C terminal LIS83_27630 PF00072 Response regulator receiver domain LIS83_27665 PF13495 Phage integrase, N-terminal SAM-like domain LIS83_27665 PF00589 Phage integrase family LIS83_27675 PF18801 response regulator aspartate phosphatase H, N terminal LIS83_27680 PF01022 Bacterial regulatory protein, arsR family LIS83_27685 PF02600 Disulfide bond formation protein DsbB LIS83_27700 PF00565 Staphylococcal nuclease homologue LIS83_27705 PF02655 ATP-grasp domain LIS83_27705 PF18419 ATP-grasp-like domain LIS83_27705 PF04262 Glutamate-cysteine ligase LIS83_27715 PF00756 Putative esterase LIS83_27720 PF08240 Alcohol dehydrogenase GroES-like domain LIS83_27720 PF00107 Zinc-binding dehydrogenase LIS83_27725 PF01638 HxlR-like helix-turn-helix LIS83_27730 PF00107 Zinc-binding dehydrogenase LIS83_27730 PF08240 Alcohol dehydrogenase GroES-like domain LIS83_27740 PF00239 Resolvase, N terminal domain LIS83_27740 PF02796 Helix-turn-helix domain of resolvase LIS83_27765 PF01526 Tn3 transposase DDE domain LIS83_27765 PF13700 Domain of unknown function (DUF4158) LIS83_27780 PF00082 Subtilase family LIS83_27785 PF00664 ABC transporter transmembrane region LIS83_27785 PF00005 ABC transporter LIS83_27785 PF03412 Peptidase C39 family LIS83_27790 PF13575 Domain of unknown function (DUF4135) LIS83_27790 PF05147 Lanthionine synthetase C-like protein LIS83_27810 PF01381 Helix-turn-helix LIS83_27820 PF03887 YfbU domain LIS83_27840 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LIS83_27860 PF01638 HxlR-like helix-turn-helix LIS83_27875 PF05504 Spore germination B3/ GerAC like, C-terminal LIS83_27885 PF03323 Bacillus/Clostridium GerA spore germination protein LIS83_27905 PF10924 Protein of unknown function (DUF2711) LIS83_27910 PF08378 Nuclease-related domain LIS83_27930 PF12323 Helix-turn-helix domain LIS83_27930 PF01385 Probable transposase LIS83_27930 PF07282 Putative transposase DNA-binding domain LIS83_27955 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LIS83_28020 PF01381 Helix-turn-helix LIS83_28035 PF01022 Bacterial regulatory protein, arsR family LIS83_28040 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LIS83_28040 PF18416 N-acetylglucosamine binding protein domain 2 LIS83_28050 PF00269 Small, acid-soluble spore proteins, alpha/beta type LIS83_28065 PF07504 Fungalysin/Thermolysin Propeptide Motif LIS83_28065 PF03413 Peptidase propeptide and YPEB domain LIS83_28065 PF01447 Thermolysin metallopeptidase, catalytic domain LIS83_28065 PF02868 Thermolysin metallopeptidase, alpha-helical domain LIS83_28080 PF01476 LysM domain LIS83_28080 PF08239 Bacterial SH3 domain LIS83_28080 PF00877 NlpC/P60 family LIS83_28125 PF01022 Bacterial regulatory protein, arsR family LIS83_28145 PF00239 Resolvase, N terminal domain LIS83_28145 PF02796 Helix-turn-helix domain of resolvase LIS83_28150 PF04439 Streptomycin adenylyltransferase LIS83_28155 PF00067 Cytochrome P450 LIS83_28180 PF00082 Subtilase family LIS83_28240 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LIS83_28240 PF01348 Type II intron maturase LIS83_28300 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LIS83_28300 PF01348 Type II intron maturase LIS83_28350 PF12323 Helix-turn-helix domain LIS83_28350 PF07282 Putative transposase DNA-binding domain LIS83_28350 PF01385 Probable transposase LIS83_28365 PF00011 Hsp20/alpha crystallin family LIS83_28380 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LIS83_28385 PF17854 FtsK alpha domain LIS83_28385 PF09397 Ftsk gamma domain LIS83_28385 PF01580 FtsK/SpoIIIE family LIS83_28400 PF00091 Tubulin/FtsZ family, GTPase domain LIS83_28415 PF12323 Helix-turn-helix domain LIS83_28415 PF01385 Probable transposase LIS83_28415 PF07282 Putative transposase DNA-binding domain LIS83_28455 PF07282 Putative transposase DNA-binding domain LIS83_28455 PF12323 Helix-turn-helix domain LIS83_28455 PF01385 Probable transposase LIS83_28495 PF00437 Type II/IV secretion system protein LIS83_28625 PF01609 Transposase DDE domain LIS83_28635 PF00239 Resolvase, N terminal domain LIS83_28635 PF02796 Helix-turn-helix domain of resolvase LIS83_28640 PF00545 ribonuclease LIS83_28645 PF01337 Barstar (barnase inhibitor) LIS83_28710 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LIS83_28740 PF10087 Uncharacterized protein conserved in bacteria (DUF2325) LIS83_28755 PF01609 Transposase DDE domain LIS83_28760 PF04235 Protein of unknown function (DUF418) LIS83_28775 PF10668 Phage terminase small subunit LIS83_28775 PF03592 Terminase small subunit LIS83_28925 PF13411 MerR HTH family regulatory protein LIS83_28925 PF13152 Protein of unknown function (DUF3967) LIS83_28940 PF13614 AAA domain LIS83_28955 PF07690 Major Facilitator Superfamily LIS83_28960 PF00005 ABC transporter LIS83_28975 PF01381 Helix-turn-helix LIS83_28995 PF01381 Helix-turn-helix LIS83_29025 PF09588 YqaJ-like viral recombinase domain LIS83_29030 PF03837 RecT family LIS83_29050 PF03796 DnaB-like helicase C terminal domain LIS83_29050 PF00772 DnaB-like helicase N terminal domain LIS83_29165 PF00239 Resolvase, N terminal domain LIS83_29165 PF02796 Helix-turn-helix domain of resolvase LIS83_29170 PF01541 GIY-YIG catalytic domain LIS83_29170 PF08459 UvrC Helix-hairpin-helix N-terminal LIS83_29170 PF02151 UvrB/uvrC motif LIS83_29285 PF01381 Helix-turn-helix LIS83_29305 PF18277 AbrB C-terminal domain LIS83_29305 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LIS83_29420 PF02899 Phage integrase, N-terminal SAM-like domain LIS83_29420 PF00589 Phage integrase family LIS83_29440 PF04860 Phage portal protein LIS83_29445 PF04233 Phage Mu protein F like protein LIS83_29450 PF14550 Putative phage serine protease XkdF LIS83_29455 PF05065 Phage capsid family LIS83_29465 PF11436 Protein of unknown function (DUF3199)