locus-tag	class	description
LIS83_00010	COG0592	DNA-directed DNA polymerase activity
LIS83_00015	COG2501	S4 domain
LIS83_00025	COG0187	DNA topoisomerase II activity
LIS83_00030	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LIS83_00065	COG0516	GMP reductase activity
LIS83_00065	COG0517	IMP dehydrogenase activity
LIS83_00070	COG1686	Belongs to the peptidase S11 family
LIS83_00100	COG1428	Deoxynucleoside kinase
LIS83_00105	COG1428	Deoxynucleoside kinase
LIS83_00110	COG1335	isochorismatase
LIS83_00115	COG0590	tRNA wobble adenosine to inosine editing
LIS83_00125	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
LIS83_00180	COG1982	Orn Lys Arg decarboxylase major
LIS83_00190	COG0470	DNA polymerase III
LIS83_00195	COG1774	PSP1 C-terminal conserved region
LIS83_00205	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
LIS83_00215	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
LIS83_00220	COG2002	toxin-antitoxin pair type II binding
LIS83_00225	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LIS83_00225	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LIS83_00230	COG0084	hydrolase, TatD family'
LIS83_00235	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
LIS83_00250	COG4466	Protein conserved in bacteria
LIS83_00265	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
LIS83_00270	COG0251	oxidation-reduction process
LIS83_00300	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
LIS83_00305	COG2002	toxin-antitoxin pair type II binding
LIS83_00310	COG2244	polysaccharide biosynthetic process
LIS83_00315	COG3956	TIGRFAM MazG family protein
LIS83_00320	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
LIS83_00340	COG1098	S1 RNA binding domain
LIS83_00355	COG2208	phosphoserine phosphatase activity
LIS83_00365	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
LIS83_00370	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
LIS83_00385	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
LIS83_00390	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
LIS83_00395	COG0512	Glutamine amidotransferase of anthranilate synthase
LIS83_00400	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
LIS83_00405	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
LIS83_00410	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
LIS83_00415	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
LIS83_00420	COG1396	sequence-specific DNA binding
LIS83_00425	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LIS83_00515	COG3880	PFAM UvrB UvrC protein
LIS83_00525	COG0542	response to heat
LIS83_00530	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
LIS83_00540	COG4956	integral membrane protein (PIN domain superfamily)
LIS83_00560	COG1045	serine acetyltransferase
LIS83_00575	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LIS83_00580	COG3688	RNA-binding protein containing a PIN domain
LIS83_00595	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
LIS83_00600	COG0250	Participates in transcription elongation, termination and antitermination
LIS83_00605	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
LIS83_00625	COG2813	Specifically methylates the guanine in position
LIS83_00640	COG1358	cellular component organization or biogenesis
LIS83_00710	COG0255	Belongs to the universal ribosomal protein uL29 family
LIS83_00770	COG0201	protein transport
LIS83_00780	COG0024	Methionine aminopeptidase
LIS83_00790	COG0257	Belongs to the bacterial ribosomal protein bL36 family
LIS83_00825	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LIS83_00850	COG0860	N-Acetylmuramoyl-L-alanine amidase
LIS83_00855	COG0489	protein tyrosine kinase activity
LIS83_00865	COG2194	sulfuric ester hydrolase activity
LIS83_00870	COG0726	polysaccharide deacetylase
LIS83_00950	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
LIS83_00955	COG4856	YbbR-like protein
LIS83_01005	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
LIS83_01010	COG0210	DNA helicase
LIS83_01015	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
LIS83_01050	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
LIS83_01090	COG2011	ABC-type metal ion transport system permease component
LIS83_01095	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LIS83_01100	COG1464	Belongs to the NlpA lipoprotein family
LIS83_01105	COG0604	alcohol dehydrogenase
LIS83_01115	COG0277	FAD linked oxidase domain protein
LIS83_01120	COG2271	Major facilitator Superfamily
LIS83_01130	COG2814	Major facilitator Superfamily
LIS83_01145	COG0601	transmembrane transport
LIS83_01150	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LIS83_01155	COG0444	Belongs to the ABC transporter superfamily
LIS83_01160	COG4608	Belongs to the ABC transporter superfamily
LIS83_01165	COG4166	transmembrane transport
LIS83_01175	COG2207	Transcriptional regulator
LIS83_01190	COG4166	transmembrane transport
LIS83_01195	COG4166	transmembrane transport
LIS83_01200	COG0656	L-ascorbic acid biosynthetic process
LIS83_01205	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LIS83_01220	COG4149	molybdate abc transporter
LIS83_01225	COG0725	ABC transporter, periplasmic molybdate-binding protein
LIS83_01230	COG1910	domain protein
LIS83_01245	COG0697	spore germination
LIS83_01260	COG0204	Acyl-transferase
LIS83_01270	COG1609	Transcriptional regulator
LIS83_01280	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LIS83_01290	COG0084	hydrolase, TatD family'
LIS83_01300	COG5298	Protein conserved in bacteria
LIS83_01325	COG0488	(ABC) transporter
LIS83_01340	COG0747	negative chemotaxis
LIS83_01345	COG0601	transmembrane transport
LIS83_01350	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LIS83_01355	COG0444	Belongs to the ABC transporter superfamily
LIS83_01360	COG4608	Belongs to the ABC transporter superfamily
LIS83_01365	COG0561	phosphatase activity
LIS83_01395	COG3185	4-Hydroxyphenylpyruvate dioxygenase
LIS83_01400	COG0179	Fumarylacetoacetate (FAA) hydrolase
LIS83_01410	COG2814	Major facilitator Superfamily
LIS83_01420	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
LIS83_01430	COG4294	response to UV
LIS83_01435	COG0705	Rhomboid family
LIS83_01435	COG0457	Tetratricopeptide repeat
LIS83_01445	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
LIS83_01450	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LIS83_01455	COG0864	Transcriptional regulator
LIS83_01460	COG2337	Toxic component of a toxin-antitoxin (TA) module
LIS83_01465	COG2183	response to ionizing radiation
LIS83_01560	COG0802	atpase or kinase
LIS83_01565	COG1214	PFAM Peptidase M22, glycoprotease
LIS83_01570	COG0456	acetyltransferase
LIS83_01580	COG0488	(ABC) transporter
LIS83_01595	COG1266	CAAX protease self-immunity
LIS83_01610	COG5444	nuclease activity
LIS83_01625	COG2252	PERMEase
LIS83_01635	COG5002	protein histidine kinase activity
LIS83_01660	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
LIS83_01735	COG2205	protein histidine kinase activity
LIS83_01740	COG0745	RESPONSE REGULATOR receiver
LIS83_01760	COG0697	spore germination
LIS83_01790	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
LIS83_01795	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
LIS83_01800	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
LIS83_01810	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
LIS83_01825	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
LIS83_01835	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
LIS83_01845	COG0151	Belongs to the GarS family
LIS83_01870	COG0210	DNA helicase
LIS83_01880	COG4851	CamS sex pheromone cAM373 precursor
LIS83_01895	COG1335	isochorismatase
LIS83_01900	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LIS83_01905	COG2011	ABC-type metal ion transport system permease component
LIS83_01910	COG1464	Belongs to the NlpA lipoprotein family
LIS83_01925	COG0003	Pfam Anion-transporting ATPase
LIS83_01930	COG1846	Transcriptional regulator
LIS83_01935	COG4682	membrane
LIS83_01955	COG1597	lipid kinase activity
LIS83_01960	COG0546	phosphoglycolate phosphatase activity
LIS83_01965	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
LIS83_01975	COG1012	belongs to the aldehyde dehydrogenase family
LIS83_01980	COG2076	Multidrug Resistance protein
LIS83_01985	COG2309	aminopeptidase activity
LIS83_02000	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LIS83_02005	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LIS83_02010	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LIS83_02015	COG5002	protein histidine kinase activity
LIS83_02020	COG4807	Protein conserved in bacteria
LIS83_02045	COG1757	Na H antiporter
LIS83_02050	COG1473	amidohydrolase
LIS83_02065	COG0450	alkyl hydroperoxide reductase
LIS83_02090	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LIS83_02095	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LIS83_02100	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LIS83_02115	COG0166	Belongs to the GPI family
LIS83_02145	COG5002	protein histidine kinase activity
LIS83_02165	COG3541	Predicted nucleotidyltransferase
LIS83_02170	COG2814	Major facilitator Superfamily
LIS83_02175	COG0723	plastoquinol--plastocyanin reductase activity
LIS83_02175	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LIS83_02200	COG0765	amino acid transport
LIS83_02205	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LIS83_02215	COG0840	transmembrane signaling receptor activity
LIS83_02220	COG0840	transmembrane signaling receptor activity
LIS83_02225	COG0366	Alpha amylase catalytic
LIS83_02230	COG1263	PTS System
LIS83_02230	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LIS83_02230	COG2190	(PTS) system
LIS83_02260	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
LIS83_02275	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LIS83_02285	COG1116	anion transmembrane transporter activity
LIS83_02295	COG0488	(ABC) transporter
LIS83_02345	COG2270	Major facilitator Superfamily
LIS83_02375	COG2310	stress, protein
LIS83_02380	COG2310	stress, protein
LIS83_02385	COG2310	stress, protein
LIS83_02390	COG0861	Integral membrane protein TerC family
LIS83_02400	COG3853	Toxic anion resistance protein (TelA)
LIS83_02415	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
LIS83_02425	COG1295	ribonuclease BN
LIS83_02430	COG2217	Heavy metal translocating P-type atpase
LIS83_02435	COG0697	spore germination
LIS83_02455	COG0586	Pfam SNARE associated Golgi protein
LIS83_02470	COG3871	stress protein (general stress protein 26)
LIS83_02475	COG0387	Pfam Sodium calcium exchanger
LIS83_02485	COG0535	radical SAM domain protein
LIS83_02505	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
LIS83_02535	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LIS83_02565	COG1263	PTS System
LIS83_02565	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LIS83_02570	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
LIS83_02585	COG0463	Glycosyl transferase, family 2
LIS83_02595	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LIS83_02595	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
LIS83_02610	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LIS83_02630	COG1228	amidohydrolase
LIS83_02635	COG1090	epimerase
LIS83_02665	COG1988	membrane-bound metal-dependent
LIS83_02670	COG1194	a g-specific adenine glycosylase
LIS83_02695	COG1132	(ABC) transporter
LIS83_02700	COG4129	membrane
LIS83_02705	COG0067	glutamate synthase
LIS83_02705	COG0069	glutamate synthase activity
LIS83_02705	COG0070	glutamate synthase
LIS83_02715	COG4555	ABC transporter
LIS83_02735	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
LIS83_02740	COG0735	belongs to the Fur family
LIS83_02905	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
LIS83_02910	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
LIS83_02920	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
LIS83_02930	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
LIS83_02935	COG1716	ATPase activity
LIS83_02935	COG5001	Diguanylate cyclase
LIS83_02940	COG2766	serine protein kinase
LIS83_02960	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
LIS83_02970	COG1585	Membrane protein implicated in regulation of membrane protease activity
LIS83_02975	COG2268	Band 7 protein
LIS83_02985	COG3290	protein histidine kinase activity
LIS83_02990	COG4565	transcriptional regulatory protein
LIS83_02995	COG2851	Citrate transporter
LIS83_03015	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
LIS83_03020	COG3842	ATPase activity
LIS83_03025	COG1175	transmembrane transport
LIS83_03030	COG0395	ABC-type sugar transport system, permease component
LIS83_03040	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
LIS83_03045	COG0745	RESPONSE REGULATOR receiver
LIS83_03050	COG5002	protein histidine kinase activity
LIS83_03060	COG4990	cell redox homeostasis
LIS83_03070	COG3290	protein histidine kinase activity
LIS83_03075	COG4565	transcriptional regulatory protein
LIS83_03080	COG3493	citrate carrier protein
LIS83_03085	COG0281	malic enzyme
LIS83_03100	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LIS83_03110	COG5002	protein histidine kinase activity
LIS83_03115	COG0745	RESPONSE REGULATOR receiver
LIS83_03120	COG0456	acetyltransferase
LIS83_03120	COG0454	-acetyltransferase
LIS83_03125	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
LIS83_03130	COG3383	formate dehydrogenase (NAD+) activity
LIS83_03135	COG2427	Protein of unknown function (DUF1641)
LIS83_03150	COG0531	amino acid
LIS83_03155	COG0640	Transcriptional regulator
LIS83_03160	COG2217	Heavy metal translocating P-type atpase
LIS83_03165	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
LIS83_03180	COG3227	Zinc metalloprotease (Elastase)
LIS83_03200	COG2720	vancomycin resistance protein
LIS83_03205	COG1316	TRANSCRIPTIONal
LIS83_03210	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LIS83_03215	COG0346	lactoylglutathione lyase activity
LIS83_03220	COG1253	flavin adenine dinucleotide binding
LIS83_03225	COG1027	Aspartate ammonia-lyase
LIS83_03230	COG1620	l-lactate permease
LIS83_03245	COG3104	oligopeptide transport
LIS83_03250	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LIS83_03255	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LIS83_03260	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LIS83_03270	COG2226	methyltransferase
LIS83_03275	COG0156	8-amino-7-oxononanoate synthase activity
LIS83_03280	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LIS83_03285	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
LIS83_03295	COG4548	von Willebrand factor, type A
LIS83_03300	COG0714	Associated with various cellular activities
LIS83_03305	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LIS83_03320	COG0531	amino acid
LIS83_03325	COG2188	Transcriptional regulator
LIS83_03330	COG1263	PTS System
LIS83_03330	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LIS83_03335	COG0366	Alpha amylase catalytic
LIS83_03350	COG0697	spore germination
LIS83_03355	COG4585	Histidine kinase
LIS83_03360	COG2197	response regulator
LIS83_03365	COG1404	Belongs to the peptidase S8 family
LIS83_03380	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
LIS83_03385	COG1115	amino acid carrier protein
LIS83_03390	COG1126	abc transporter atp-binding protein
LIS83_03395	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LIS83_03400	COG0765	amino acid transport
LIS83_03405	COG0765	amino acid transport
LIS83_03410	COG0833	amino acid
LIS83_03435	COG2378	regulation of single-species biofilm formation
LIS83_03440	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
LIS83_03445	COG5002	protein histidine kinase activity
LIS83_03460	COG0659	secondary active sulfate transmembrane transporter activity
LIS83_03475	COG0747	negative chemotaxis
LIS83_03485	COG0601	transmembrane transport
LIS83_03490	COG4608	Belongs to the ABC transporter superfamily
LIS83_03500	COG2271	Major facilitator Superfamily
LIS83_03505	COG1846	Transcriptional regulator
LIS83_03510	COG0477	Major facilitator Superfamily
LIS83_03515	COG1609	Transcriptional regulator
LIS83_03520	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LIS83_03535	COG1172	Belongs to the binding-protein-dependent transport system permease family
LIS83_03540	COG1879	ABC-type sugar transport system periplasmic component
LIS83_03560	COG1063	alcohol dehydrogenase
LIS83_03575	COG3568	Endonuclease Exonuclease Phosphatase
LIS83_03605	COG0840	transmembrane signaling receptor activity
LIS83_03610	COG3584	3D domain protein
LIS83_03610	COG1388	LysM domain
LIS83_03615	COG1476	TRANSCRIPTIONal
LIS83_03630	COG3104	oligopeptide transport
LIS83_03635	COG1114	Component of the transport system for branched-chain amino acids
LIS83_03650	COG1113	amino acid transport
LIS83_03655	COG2252	PERMEase
LIS83_03670	COG2153	protein acetylation
LIS83_03680	COG0475	glutathione-regulated potassium exporter activity
LIS83_03680	COG0569	domain protein
LIS83_03695	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
LIS83_03700	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
LIS83_03705	COG4990	cell redox homeostasis
LIS83_03720	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LIS83_03725	COG0697	spore germination
LIS83_03730	COG0531	amino acid
LIS83_03740	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
LIS83_03745	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
LIS83_03750	COG1918	ferrous iron import across plasma membrane
LIS83_03750	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
LIS83_03755	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
LIS83_03760	COG0573	inorganic phosphate transmembrane transporter activity
LIS83_03765	COG0581	inorganic phosphate transmembrane transporter activity
LIS83_03775	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LIS83_03895	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
LIS83_03915	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
LIS83_03920	COG1116	anion transmembrane transporter activity
LIS83_03925	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LIS83_03930	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
LIS83_03935	COG0352	thiamine-phosphate diphosphorylase activity
LIS83_03940	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LIS83_03945	COG2104	thiamine diphosphate biosynthetic process
LIS83_03955	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
LIS83_03960	COG0351	phosphomethylpyrimidine kinase
LIS83_04000	COG2205	protein histidine kinase activity
LIS83_04005	COG2814	Major facilitator Superfamily
LIS83_04010	COG1846	Transcriptional regulator
LIS83_04035	COG0577	efflux transmembrane transporter activity
LIS83_04035	COG1136	(ABC) transporter
LIS83_04045	COG2252	PERMEase
LIS83_04050	COG1028	Short-chain dehydrogenase reductase Sdr
LIS83_04065	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LIS83_04070	COG1621	beta-fructofuranosidase activity
LIS83_04075	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LIS83_04075	COG1263	PTS System
LIS83_04080	COG1609	Transcriptional regulator
LIS83_04090	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LIS83_04130	COG0778	Nitroreductase
LIS83_04135	COG2719	SpoVR family
LIS83_04180	COG0446	pyridine nucleotide-disulphide oxidoreductase
LIS83_04185	COG1937	Protein conserved in bacteria
LIS83_04190	COG0425	Belongs to the sulfur carrier protein TusA family
LIS83_04190	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LIS83_04195	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LIS83_04195	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LIS83_04200	COG0425	Belongs to the sulfur carrier protein TusA family
LIS83_04205	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LIS83_04215	COG2210	Belongs to the sulfur carrier protein TusA family
LIS83_04220	COG0730	response to heat
LIS83_04230	COG1316	TRANSCRIPTIONal
LIS83_04235	COG0604	alcohol dehydrogenase
LIS83_04240	COG1283	sodium-dependent phosphate transmembrane transporter activity
LIS83_04255	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LIS83_04255	COG3711	transcriptional antiterminator
LIS83_04260	COG1447	Phosphotransferase system cellobiose-specific component IIA
LIS83_04265	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
LIS83_04285	COG1388	LysM domain
LIS83_04285	COG3584	3D domain protein
LIS83_04290	COG0577	efflux transmembrane transporter activity
LIS83_04295	COG1136	(ABC) transporter
LIS83_04305	COG5522	Integral membrane protein (intg_mem_TP0381)
LIS83_04320	COG0577	efflux transmembrane transporter activity
LIS83_04325	COG1114	Component of the transport system for branched-chain amino acids
LIS83_04330	COG3546	catalase activity
LIS83_04365	COG0586	Pfam SNARE associated Golgi protein
LIS83_04400	COG0531	amino acid
LIS83_04405	COG0475	glutathione-regulated potassium exporter activity
LIS83_04415	COG1737	Transcriptional regulator
LIS83_04425	COG1263	PTS System
LIS83_04425	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LIS83_04440	COG2259	Doxx family
LIS83_04460	COG1522	sequence-specific DNA binding
LIS83_04475	COG2076	Multidrug Resistance protein
LIS83_04480	COG1309	transcriptional regulator
LIS83_04485	COG2814	Major facilitator Superfamily
LIS83_04490	COG4533	DNA binding
LIS83_04495	COG2211	Major facilitator Superfamily
LIS83_04505	COG0693	protein deglycase activity
LIS83_04510	COG0693	protein deglycase activity
LIS83_04510	COG0753	catalase activity
LIS83_04520	COG0531	amino acid
LIS83_04535	COG1012	belongs to the aldehyde dehydrogenase family
LIS83_04540	COG1132	(ABC) transporter
LIS83_04545	COG1132	(ABC) transporter
LIS83_04550	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LIS83_04555	COG0765	amino acid transport
LIS83_04560	COG1126	abc transporter atp-binding protein
LIS83_04575	COG0189	ligase activity
LIS83_04600	COG4585	Histidine kinase
LIS83_04645	COG0028	Belongs to the TPP enzyme family
LIS83_04650	COG3527	Alpha-acetolactate decarboxylase
LIS83_04660	COG0561	phosphatase activity
LIS83_04665	COG3409	Peptidoglycan-binding domain 1 protein
LIS83_04665	COG5632	N-Acetylmuramoyl-L-alanine amidase
LIS83_04670	COG0635	Involved in the biosynthesis of porphyrin-containing compound
LIS83_04685	COG0659	secondary active sulfate transmembrane transporter activity
LIS83_04715	COG2244	polysaccharide biosynthetic process
LIS83_04725	COG0860	N-Acetylmuramoyl-L-alanine amidase
LIS83_04730	COG4196	transglutaminase domain protein
LIS83_04750	COG1024	Enoyl-CoA hydratase
LIS83_04770	COG1363	Peptidase, m42
LIS83_04790	COG3938	Belongs to the proline racemase family
LIS83_04810	COG0477	Major facilitator Superfamily
LIS83_04815	COG3290	protein histidine kinase activity
LIS83_04820	COG4565	transcriptional regulatory protein
LIS83_04825	COG3181	Tripartite tricarboxylate transporter family receptor
LIS83_04865	COG4978	Transcriptional regulator
LIS83_04865	COG0789	Transcriptional regulator
LIS83_04880	COG0305	Participates in initiation and elongation during chromosome replication
LIS83_04890	COG1401	restriction endodeoxyribonuclease activity
LIS83_04975	COG3320	Male sterility
LIS83_04975	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LIS83_04980	COG1309	transcriptional regulator
LIS83_04995	COG1183	phosphatidylcholine synthase activity
LIS83_05060	COG2376	Dihydroxyacetone kinase
LIS83_05070	COG2376	Dihydroxyacetone kinase
LIS83_05075	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
LIS83_05080	COG1959	2 iron, 2 sulfur cluster binding
LIS83_05095	COG0457	Tetratricopeptide repeat
LIS83_05185	COG1191	sigma factor activity
LIS83_05195	COG2208	phosphoserine phosphatase activity
LIS83_05200	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
LIS83_05205	COG0784	Response regulator, receiver
LIS83_05205	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LIS83_05205	COG2198	Histidine kinase
LIS83_05205	COG2205	protein histidine kinase activity
LIS83_05245	COG4585	Histidine kinase
LIS83_05250	COG2197	response regulator
LIS83_05275	COG0420	3'-5' exonuclease activity
LIS83_05280	COG4717	serine-type aminopeptidase activity
LIS83_05315	COG0346	lactoylglutathione lyase activity
LIS83_05320	COG0346	lactoylglutathione lyase activity
LIS83_05330	COG0457	Tetratricopeptide repeat
LIS83_05340	COG2267	carboxylic ester hydrolase activity
LIS83_05360	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
LIS83_05365	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
LIS83_05375	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
LIS83_05425	COG0477	Major facilitator Superfamily
LIS83_05430	COG0477	Major facilitator Superfamily
LIS83_05440	COG3973	AAA domain
LIS83_05445	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LIS83_05465	COG4980	gas vesicle protein
LIS83_05470	COG0537	adenosine 5'-monophosphoramidase activity
LIS83_05475	COG1131	(ABC) transporter
LIS83_05480	COG4473	ABC transporter
LIS83_05555	COG1309	transcriptional regulator
LIS83_05565	COG3402	PFAM membrane-flanked domain
LIS83_05570	COG3428	Bacterial PH domain
LIS83_05620	COG3402	PFAM membrane-flanked domain
LIS83_05625	COG3428	Bacterial PH domain
LIS83_05630	COG2329	Antibiotic biosynthesis monooxygenase
LIS83_05635	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LIS83_05650	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
LIS83_05690	COG1309	transcriptional regulator
LIS83_05695	COG1511	domain protein
LIS83_05720	COG1609	Transcriptional regulator
LIS83_05730	COG1234	tRNA 3'-trailer cleavage
LIS83_05735	COG0095	Lipoate-protein ligase
LIS83_05745	COG0318	PFAM AMP-dependent synthetase and ligase
LIS83_05810	COG1073	alpha beta
LIS83_05815	COG1408	metallophosphoesterase
LIS83_05825	COG1078	dGTPase activity
LIS83_05835	COG1595	DNA-templated transcription, initiation
LIS83_05840	COG2207	Transcriptional regulator
LIS83_05840	COG3708	Transcriptional regulator
LIS83_05845	COG2205	protein histidine kinase activity
LIS83_05850	COG0745	RESPONSE REGULATOR receiver
LIS83_05875	COG0501	Belongs to the peptidase M48B family
LIS83_05880	COG0697	spore germination
LIS83_05900	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
LIS83_05905	COG2224	Isocitrate lyase
LIS83_05930	COG4903	ComK protein
LIS83_05935	COG0398	Pfam SNARE associated Golgi protein
LIS83_05995	COG0179	Fumarylacetoacetate (FAA) hydrolase
LIS83_06020	COG0367	asparagine synthase
LIS83_06025	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
LIS83_06030	COG0753	catalase activity
LIS83_06035	COG0004	ammonium transporteR
LIS83_06055	COG2996	Protein conserved in bacteria
LIS83_06065	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LIS83_06075	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LIS83_06095	COG0561	phosphatase activity
LIS83_06105	COG0542	response to heat
LIS83_06115	COG2267	carboxylic ester hydrolase activity
LIS83_06130	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LIS83_06135	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
LIS83_06140	COG5504	Zn-dependent protease
LIS83_06150	COG0180	Tryptophanyl-tRNA synthetase
LIS83_06160	COG4166	transmembrane transport
LIS83_06165	COG0601	transmembrane transport
LIS83_06170	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LIS83_06175	COG0444	Belongs to the ABC transporter superfamily
LIS83_06180	COG4608	Belongs to the ABC transporter superfamily
LIS83_06185	COG0534	Mate efflux family protein
LIS83_06190	COG4166	transmembrane transport
LIS83_06205	COG0861	Integral membrane protein TerC family
LIS83_06210	COG4862	establishment of competence for transformation
LIS83_06215	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LIS83_06225	COG1164	Oligoendopeptidase f
LIS83_06240	COG2346	COG2346, Truncated hemoglobins
LIS83_06245	COG4116	CYTH
LIS83_06255	COG2357	RelA SpoT domain protein
LIS83_06265	COG0564	pseudouridine synthase activity
LIS83_06280	COG0772	Belongs to the SEDS family
LIS83_06285	COG1216	Glycosyl transferase, family 2
LIS83_06305	COG0457	Tetratricopeptide repeat
LIS83_06305	COG0463	Glycosyl transferase, family 2
LIS83_06325	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
LIS83_06340	COG1091	dTDP-4-dehydrorhamnose reductase activity
LIS83_06385	COG2153	protein acetylation
LIS83_06395	COG2382	esterase
LIS83_06410	COG5492	domain, Protein
LIS83_06415	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LIS83_06425	COG0512	Glutamine amidotransferase of anthranilate synthase
LIS83_06425	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
LIS83_06460	COG1620	l-lactate permease
LIS83_06465	COG5634	Uncharacterized conserved protein (DUF2278)
LIS83_06505	COG2226	methyltransferase
LIS83_06525	COG0508	dehydrogenase complex catalyzes the overall conversion of
LIS83_06535	COG1476	TRANSCRIPTIONal
LIS83_06595	COG5293	efflux transmembrane transporter activity
LIS83_06600	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
LIS83_06625	COG1686	Belongs to the peptidase S11 family
LIS83_06630	COG0681	Belongs to the peptidase S26 family
LIS83_06665	COG1012	belongs to the aldehyde dehydrogenase family
LIS83_06675	COG1176	ABC-type spermidine putrescine transport system, permease component I
LIS83_06680	COG1177	transmembrane transport
LIS83_06685	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
LIS83_06695	COG2409	Drug exporters of the RND superfamily
LIS83_06705	COG0564	pseudouridine synthase activity
LIS83_06715	COG2340	Cysteine-rich secretory protein family
LIS83_06720	COG0247	lactate metabolic process
LIS83_06725	COG0277	FAD linked oxidase domain protein
LIS83_06730	COG3835	regulator
LIS83_06740	COG0745	RESPONSE REGULATOR receiver
LIS83_06745	COG5002	protein histidine kinase activity
LIS83_06750	COG2186	Transcriptional regulator
LIS83_06770	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
LIS83_06780	COG2116	formate transmembrane transporter activity
LIS83_06785	COG0861	Integral membrane protein TerC family
LIS83_06790	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
LIS83_06800	COG2030	dehydratase
LIS83_06820	COG1028	Short-chain dehydrogenase reductase Sdr
LIS83_06825	COG3243	poly(R)-hydroxyalkanoic acid synthase
LIS83_06830	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LIS83_06835	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
LIS83_06850	COG1840	ABC-type Fe3 transport system, periplasmic component
LIS83_06855	COG3842	ATPase activity
LIS83_06880	COG1349	DNA-binding transcription factor activity
LIS83_06890	COG0235	Class ii aldolase
LIS83_06900	COG2861	carbohydrate metabolic process
LIS83_06910	COG3852	Histidine kinase
LIS83_06915	COG1846	Transcriptional regulator
LIS83_06925	COG2318	DinB family
LIS83_06935	COG5002	protein histidine kinase activity
LIS83_06945	COG0720	synthase
LIS83_06960	COG4873	Protein conserved in bacteria
LIS83_06990	COG1780	Probably involved in ribonucleotide reductase function
LIS83_07000	COG1403	HNH endonuclease
LIS83_07010	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LIS83_07015	COG1725	Transcriptional regulator
LIS83_07020	COG1131	(ABC) transporter
LIS83_07030	COG1131	(ABC) transporter
LIS83_07035	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
LIS83_07050	COG1522	sequence-specific DNA binding
LIS83_07060	COG1335	isochorismatase
LIS83_07070	COG1619	proteins homologs of microcin C7 resistance protein MccF
LIS83_07075	COG2070	2-Nitropropane dioxygenase
LIS83_07080	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
LIS83_07090	COG1696	Membrane protein involved in D-alanine export
LIS83_07115	COG0716	FMN binding
LIS83_07150	COG0534	Mate efflux family protein
LIS83_07155	COG1968	undecaprenyl-diphosphatase activity
LIS83_07170	COG1846	Transcriptional regulator
LIS83_07180	COG1301	dicarboxylic acid transport
LIS83_07185	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
LIS83_07190	COG4709	membrane
LIS83_07195	COG3874	Sporulation protein YtfJ
LIS83_07215	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
LIS83_07220	COG0028	Belongs to the TPP enzyme family
LIS83_07225	COG0440	acetolactate synthase activity
LIS83_07300	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
LIS83_07310	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LIS83_07315	COG1183	phosphatidylcholine synthase activity
LIS83_07320	COG1368	sulfuric ester hydrolase activity
LIS83_07330	COG0019	diaminopimelate decarboxylase activity
LIS83_07350	COG0529	Catalyzes the synthesis of activated sulfate
LIS83_07355	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LIS83_07375	COG1648	precorrin-2 dehydrogenase activity
LIS83_07380	COG0733	neurotransmitter:sodium symporter activity
LIS83_07400	COG1757	Na H antiporter
LIS83_07415	COG4758	membrane
LIS83_07420	COG4585	Histidine kinase
LIS83_07425	COG2197	response regulator
LIS83_07435	COG1114	Component of the transport system for branched-chain amino acids
LIS83_07445	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
LIS83_07485	COG0730	response to heat
LIS83_07490	COG0306	phosphate transporter
LIS83_07495	COG1392	Phosphate transport regulator
LIS83_07500	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LIS83_07520	COG3852	Histidine kinase
LIS83_07525	COG1801	Protein of unknown function DUF72
LIS83_07535	COG0582	viral genome integration into host DNA
LIS83_07540	COG5002	protein histidine kinase activity
LIS83_07560	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
LIS83_07560	COG0392	lysyltransferase activity
LIS83_07575	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
LIS83_07580	COG1686	Belongs to the peptidase S11 family
LIS83_07585	COG2715	membrane protein required for spore maturation
LIS83_07590	COG0700	Nucleoside recognition
LIS83_07595	COG1187	pseudouridine synthase activity
LIS83_07605	COG1333	cytochrome c biogenesis protein
LIS83_07610	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
LIS83_07615	COG0745	RESPONSE REGULATOR receiver
LIS83_07620	COG5002	protein histidine kinase activity
LIS83_07625	COG2096	Adenosyltransferase
LIS83_07630	COG4942	peptidase
LIS83_07640	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
LIS83_07645	COG1141	Ferredoxin
LIS83_07655	COG0514	ATP-dependent DNA helicase (RecQ)
LIS83_07660	COG1266	CAAX protease self-immunity
LIS83_07670	COG1408	metallophosphoesterase
LIS83_07680	COG4862	establishment of competence for transformation
LIS83_07685	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
LIS83_07705	COG0492	ferredoxin-NADP+ reductase activity
LIS83_07780	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
LIS83_07795	COG0142	geranyltranstransferase activity
LIS83_07805	COG0142	geranyltranstransferase activity
LIS83_07825	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
LIS83_07830	COG0457	Tetratricopeptide repeat
LIS83_07850	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
LIS83_07860	COG4347	Protein of unknown function (DUF1405)
LIS83_07875	COG2738	Putative neutral zinc metallopeptidase
LIS83_07885	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LIS83_07890	COG1694	Mazg nucleotide pyrophosphohydrolase
LIS83_07905	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
LIS83_07910	COG0438	transferase activity, transferring glycosyl groups
LIS83_07945	COG1199	ATP-dependent helicase activity
LIS83_07945	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
LIS83_07965	COG3935	DnaD domain protein
LIS83_07970	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
LIS83_07980	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LIS83_07980	COG4499	WXG100 protein secretion system (Wss), protein YukC
LIS83_08040	COG0116	Belongs to the methyltransferase superfamily
LIS83_08050	COG1199	ATP-dependent helicase activity
LIS83_08055	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
LIS83_08065	COG3173	Aminoglycoside phosphotransferase
LIS83_08070	COG0024	Methionine aminopeptidase
LIS83_08080	COG2233	PERMEase
LIS83_08085	COG2311	Membrane
LIS83_08090	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
LIS83_08100	COG0456	acetyltransferase
LIS83_08140	COG0754	glutathionylspermidine amidase activity
LIS83_08155	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LIS83_08170	COG0454	-acetyltransferase
LIS83_08190	COG0328	RNA-DNA hybrid ribonuclease activity
LIS83_08225	COG3403	YqcI/YcgG family
LIS83_08230	COG1280	lysine exporter protein (LysE YggA)
LIS83_08245	COG3162	membrane
LIS83_08250	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LIS83_08255	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
LIS83_08265	COG0475	glutathione-regulated potassium exporter activity
LIS83_08270	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LIS83_08275	COG4978	Transcriptional regulator
LIS83_08275	COG0789	Transcriptional regulator
LIS83_08285	COG2323	membrane
LIS83_08290	COG1434	Gram-negative-bacterium-type cell wall biogenesis
LIS83_08345	COG1923	regulation of RNA biosynthetic process
LIS83_08355	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
LIS83_08360	COG1360	Flagellar Motor Protein
LIS83_08365	COG2201	protein-glutamate methylesterase activity
LIS83_08370	COG0643	Histidine kinase
LIS83_08370	COG2198	Histidine kinase
LIS83_08375	COG1776	CheC inhibitor of MCP methylation
LIS83_08375	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
LIS83_08390	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
LIS83_08410	COG1256	bacterial-type flagellum assembly
LIS83_08415	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
LIS83_08435	COG1815	bacterial-type flagellum-dependent cell motility
LIS83_08440	COG1558	bacterial-type flagellum-dependent cell motility
LIS83_08450	COG1766	The M ring may be actively involved in energy transduction
LIS83_08455	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
LIS83_08465	COG1157	protein secretion by the type III secretion system
LIS83_08485	COG1749	Flagellar hook protein flgE
LIS83_08500	COG0784	Response regulator, receiver
LIS83_08500	COG0835	chemotaxis
LIS83_08510	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
LIS83_08515	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
LIS83_08520	COG0741	lytic transglycosylase activity
LIS83_08530	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
LIS83_08535	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
LIS83_08535	COG1776	CheC inhibitor of MCP methylation
LIS83_08545	COG1338	Plays a role in the flagellum-specific transport system
LIS83_08550	COG1987	bacterial-type flagellum assembly
LIS83_08560	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
LIS83_08565	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
LIS83_08570	COG1419	protein localization to endoplasmic reticulum
LIS83_08575	COG4786	Flagellar basal body rod
LIS83_08580	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
LIS83_08635	COG2329	Antibiotic biosynthesis monooxygenase
LIS83_08660	COG0583	DNA-binding transcription factor activity
LIS83_08665	COG3842	ATPase activity
LIS83_08680	COG1234	tRNA 3'-trailer cleavage
LIS83_08695	COG1028	Short-chain dehydrogenase reductase Sdr
LIS83_08735	COG1686	Belongs to the peptidase S11 family
LIS83_08745	COG0406	alpha-ribazole phosphatase activity
LIS83_08760	COG1846	Transcriptional regulator
LIS83_08770	COG0367	asparagine synthase
LIS83_08800	COG1802	Transcriptional regulator
LIS83_08805	COG0697	spore germination
LIS83_08810	COG0523	cobalamin synthesis protein
LIS83_08815	COG0701	Predicted permease
LIS83_08830	COG1757	Na H antiporter
LIS83_08835	COG0114	fumarate hydratase activity
LIS83_08850	COG0534	Mate efflux family protein
LIS83_08855	COG3340	Belongs to the peptidase S51 family
LIS83_08875	COG0785	Cytochrome C biogenesis protein
LIS83_08905	COG2733	membrane
LIS83_08940	COG1131	(ABC) transporter
LIS83_08955	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LIS83_08960	COG0528	UMP kinase activity
LIS83_08970	COG1027	Aspartate ammonia-lyase
LIS83_08975	COG0281	malic enzyme
LIS83_08980	COG4191	Histidine kinase
LIS83_08985	COG0784	Response regulator, receiver
LIS83_08990	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
LIS83_09045	COG1051	belongs to the nudix hydrolase family
LIS83_09060	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LIS83_09085	COG1966	Carbon starvation protein
LIS83_09095	COG0477	Major facilitator Superfamily
LIS83_09100	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LIS83_09110	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LIS83_09115	COG4166	transmembrane transport
LIS83_09120	COG2223	nitrite transmembrane transporter activity
LIS83_09125	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
LIS83_09140	COG2244	polysaccharide biosynthetic process
LIS83_09145	COG0733	neurotransmitter:sodium symporter activity
LIS83_09155	COG5566	PFAM Mor transcription activator
LIS83_09160	COG2323	membrane
LIS83_09175	COG2084	Dehydrogenase
LIS83_09190	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LIS83_09200	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
LIS83_09205	COG0028	Belongs to the TPP enzyme family
LIS83_09215	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
LIS83_09225	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
LIS83_09250	COG2814	Major facilitator Superfamily
LIS83_09255	COG3384	dioxygenase
LIS83_09275	COG3279	Response regulator of the LytR AlgR family
LIS83_09280	COG0427	acetyl-CoA hydrolase
LIS83_09315	COG4166	transmembrane transport
LIS83_09340	COG0535	radical SAM domain protein
LIS83_09345	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LIS83_09370	COG1914	H( )-stimulated, divalent metal cation uptake system
LIS83_09385	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
LIS83_09390	COG0531	amino acid
LIS83_09435	COG0745	RESPONSE REGULATOR receiver
LIS83_09440	COG2205	protein histidine kinase activity
LIS83_09445	COG2390	Transcriptional regulator
LIS83_09455	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LIS83_09460	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
LIS83_09490	COG0006	proline dipeptidase activity
LIS83_09495	COG2132	Multicopper oxidase
LIS83_09560	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
LIS83_09570	COG0076	glutamate decarboxylase activity
LIS83_09575	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
LIS83_09585	COG0464	growth
LIS83_09635	COG1114	Component of the transport system for branched-chain amino acids
LIS83_09645	COG2372	response to copper ion
LIS83_09645	COG1276	copper resistance
LIS83_09650	COG4549	nuclear export factor GLE1
LIS83_09660	COG0697	spore germination
LIS83_09665	COG0583	DNA-binding transcription factor activity
LIS83_09670	COG1959	2 iron, 2 sulfur cluster binding
LIS83_09675	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
LIS83_09680	COG0778	Nitroreductase
LIS83_09690	COG0628	permease
LIS83_09700	COG1231	oxidoreductase activity
LIS83_09705	COG0523	cobalamin synthesis protein
LIS83_09720	COG0318	PFAM AMP-dependent synthetase and ligase
LIS83_09725	COG2030	dehydratase
LIS83_09730	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LIS83_09740	COG0411	ABC transporter
LIS83_09760	COG0583	DNA-binding transcription factor activity
LIS83_09770	COG1942	4-Oxalocrotonate Tautomerase
LIS83_09790	COG1271	oxidase subunit
LIS83_09795	COG1294	oxidase, subunit
LIS83_09800	COG4988	ABC transporter
LIS83_09805	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
LIS83_09825	COG1686	Belongs to the peptidase S11 family
LIS83_09840	COG1388	LysM domain
LIS83_09840	COG0791	NLP P60 protein
LIS83_09850	COG1132	(ABC) transporter
LIS83_09855	COG0745	RESPONSE REGULATOR receiver
LIS83_09860	COG5002	protein histidine kinase activity
LIS83_09870	COG0300	oxidoreductase activity
LIS83_09875	COG4122	O-methyltransferase activity
LIS83_09905	COG0460	homoserine dehydrogenase
LIS83_09930	COG1316	TRANSCRIPTIONal
LIS83_09940	COG0745	RESPONSE REGULATOR receiver
LIS83_09945	COG5002	protein histidine kinase activity
LIS83_09960	COG1285	pathogenesis
LIS83_09965	COG1247	-acetyltransferase
LIS83_09985	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LIS83_09995	COG1082	Xylose isomerase domain protein TIM barrel
LIS83_10005	COG2814	Major facilitator Superfamily
LIS83_10010	COG1279	arginine transmembrane transporter activity
LIS83_10015	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LIS83_10025	COG1752	Esterase of the alpha-beta hydrolase superfamily
LIS83_10060	COG0577	efflux transmembrane transporter activity
LIS83_10065	COG2002	toxin-antitoxin pair type II binding
LIS83_10070	COG1404	Belongs to the peptidase S8 family
LIS83_10075	COG0640	Transcriptional regulator
LIS83_10080	COG0667	Aldo Keto reductase
LIS83_10085	COG2814	Major facilitator Superfamily
LIS83_10110	COG0840	transmembrane signaling receptor activity
LIS83_10125	COG3949	Membrane
LIS83_10130	COG0783	Belongs to the Dps family
LIS83_10145	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LIS83_10155	COG1231	oxidoreductase activity
LIS83_10165	COG4989	oxidoreductase activity
LIS83_10170	COG0523	cobalamin synthesis protein
LIS83_10175	COG0456	acetyltransferase
LIS83_10195	COG3443	Belongs to the bacterial solute-binding protein 9 family
LIS83_10195	COG0803	Belongs to the bacterial solute-binding protein 9 family
LIS83_10205	COG0702	epimerase
LIS83_10215	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
LIS83_10225	COG4166	transmembrane transport
LIS83_10240	COG0406	alpha-ribazole phosphatase activity
LIS83_10250	COG5337	Spore coat protein CotH
LIS83_10255	COG1051	belongs to the nudix hydrolase family
LIS83_10260	COG0586	Pfam SNARE associated Golgi protein
LIS83_10265	COG2244	polysaccharide biosynthetic process
LIS83_10275	COG0701	Predicted permease
LIS83_10280	COG3689	TIGRFAM TIGR03943 family protein
LIS83_10285	COG1607	acyl-coa hydrolase
LIS83_10295	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LIS83_10310	COG0702	epimerase
LIS83_10315	COG2839	Protein conserved in bacteria
LIS83_10320	COG1253	flavin adenine dinucleotide binding
LIS83_10335	COG1114	Component of the transport system for branched-chain amino acids
LIS83_10340	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LIS83_10360	COG0860	N-Acetylmuramoyl-L-alanine amidase
LIS83_10370	COG1876	peptidase activity
LIS83_10380	COG0154	amidase activity
LIS83_10385	COG2211	Major facilitator Superfamily
LIS83_10400	COG2368	4-hydroxyphenylacetate
LIS83_10410	COG0196	riboflavin kinase activity
LIS83_10425	COG0251	oxidation-reduction process
LIS83_10435	COG3971	2-oxopent-4-enoate hydratase activity
LIS83_10455	COG1942	4-Oxalocrotonate Tautomerase
LIS83_10465	COG0561	phosphatase activity
LIS83_10475	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LIS83_10480	COG4106	trans-aconitate 2-methyltransferase activity
LIS83_10495	COG1819	glycosyl
LIS83_10500	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LIS83_10505	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LIS83_10535	COG0456	acetyltransferase
LIS83_10620	COG3874	Sporulation protein YtfJ
LIS83_10645	COG2226	methyltransferase
LIS83_10670	COG0346	lactoylglutathione lyase activity
LIS83_10685	COG1595	DNA-templated transcription, initiation
LIS83_10700	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
LIS83_10700	COG0426	domain, Protein
LIS83_10710	COG0386	Belongs to the glutathione peroxidase family
LIS83_10715	COG1305	Transglutaminase-like
LIS83_10720	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
LIS83_10725	COG0714	Associated with various cellular activities
LIS83_10740	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
LIS83_10745	COG1140	nitrate reductase beta subunit
LIS83_10750	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
LIS83_10755	COG2181	nitrate reductase activity
LIS83_10760	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
LIS83_10765	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
LIS83_10770	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
LIS83_10775	COG0303	'Molybdopterin
LIS83_10780	COG0314	molybdopterin synthase activity
LIS83_10790	COG2223	nitrite transmembrane transporter activity
LIS83_10800	COG1648	precorrin-2 dehydrogenase activity
LIS83_10810	COG1587	Uroporphyrinogen-III synthase
LIS83_10810	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
LIS83_10815	COG2146	nitrite reductase [NAD(P)H] activity
LIS83_10820	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LIS83_10825	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
LIS83_10860	COG2359	stage V sporulation protein S
LIS83_10915	COG1418	mRNA catabolic process
LIS83_10920	COG0488	(ABC) transporter
LIS83_10935	COG0629	single-stranded DNA binding
LIS83_10950	COG1413	lyase activity
LIS83_10965	COG2521	methyltransferase
LIS83_10965	COG2136	Putative SAM-dependent methyltransferase
LIS83_11010	COG0017	Asparaginyl-tRNA synthetase
LIS83_11030	COG1674	ftsk spoiiie
LIS83_11055	COG5444	nuclease activity
LIS83_11170	COG1929	Belongs to the glycerate kinase type-1 family
LIS83_11175	COG0471	metal ion transport
LIS83_11180	COG0745	RESPONSE REGULATOR receiver
LIS83_11185	COG3850	Histidine kinase
LIS83_11185	COG5002	protein histidine kinase activity
LIS83_11200	COG0733	neurotransmitter:sodium symporter activity
LIS83_11225	COG2610	gluconate transmembrane transporter activity
LIS83_11230	COG1454	alcohol dehydrogenase
LIS83_11235	COG1794	racemase activity, acting on amino acids and derivatives
LIS83_11245	COG0456	acetyltransferase
LIS83_11250	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
LIS83_11260	COG1131	(ABC) transporter
LIS83_11265	COG4473	ABC transporter
LIS83_11275	COG0546	phosphoglycolate phosphatase activity
LIS83_11295	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
LIS83_11300	COG3250	beta-galactosidase activity
LIS83_11315	COG0768	penicillin binding
LIS83_11325	COG0204	Acyl-transferase
LIS83_11330	COG1272	protein, Hemolysin III
LIS83_11340	COG0805	protein transport
LIS83_11350	COG1307	EDD domain protein, DegV family
LIS83_11355	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
LIS83_11360	COG1999	signal sequence binding
LIS83_11365	COG0071	Belongs to the small heat shock protein (HSP20) family
LIS83_11370	COG0367	asparagine synthase
LIS83_11390	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LIS83_11395	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
LIS83_11415	COG1335	isochorismatase
LIS83_11420	COG1051	belongs to the nudix hydrolase family
LIS83_11430	COG0668	transmembrane transport
LIS83_11435	COG2203	Gaf domain
LIS83_11435	COG4585	Histidine kinase
LIS83_11440	COG2197	response regulator
LIS83_11450	COG1064	alcohol dehydrogenase
LIS83_11475	COG1070	Carbohydrate kinase
LIS83_11480	COG1070	Carbohydrate kinase
LIS83_11510	COG1125	glycine betaine transport
LIS83_11510	COG0517	IMP dehydrogenase activity
LIS83_11515	COG1174	glycine betaine transport
LIS83_11550	COG1253	flavin adenine dinucleotide binding
LIS83_11555	COG1012	belongs to the aldehyde dehydrogenase family
LIS83_11560	COG5506	Protein of unknown function (DUF1694)
LIS83_11575	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
LIS83_11580	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
LIS83_11585	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
LIS83_11590	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LIS83_11595	COG0456	acetyltransferase
LIS83_11600	COG3829	transcription factor binding
LIS83_11605	COG1509	lysine 2,3-aminomutase activity
LIS83_11640	COG0515	serine threonine protein kinase
LIS83_11640	COG3064	Membrane
LIS83_11640	COG4991	sh3 domain protein
LIS83_11645	COG4326	sporulation control protein
LIS83_11650	COG0671	phosphoesterase, PA-phosphatase related
LIS83_11655	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
LIS83_11660	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LIS83_11725	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LIS83_11760	COG0300	oxidoreductase activity
LIS83_11780	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LIS83_11780	COG4499	WXG100 protein secretion system (Wss), protein YukC
LIS83_11790	COG2814	Major facilitator Superfamily
LIS83_11795	COG4841	protein insertion into membrane
LIS83_11800	COG0372	Belongs to the citrate synthase family
LIS83_11805	COG2079	MmgE PrpD family protein
LIS83_11810	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
LIS83_11815	COG1960	acyl-CoA dehydrogenase activity
LIS83_11820	COG2084	Dehydrogenase
LIS83_11830	COG1280	lysine exporter protein (LysE YggA)
LIS83_11835	COG1024	Enoyl-CoA hydratase
LIS83_11850	COG0420	3'-5' exonuclease activity
LIS83_11875	COG2223	nitrite transmembrane transporter activity
LIS83_11880	COG1028	Short-chain dehydrogenase reductase Sdr
LIS83_11885	COG1169	isochorismate synthase
LIS83_11890	COG1021	2,3-dihydroxybenzoate-AMP ligase
LIS83_11895	COG3433	isochorismatase activity
LIS83_11895	COG1535	isochorismatase
LIS83_11900	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LIS83_11905	COG3251	PFAM MbtH domain protein
LIS83_11910	COG2814	Major facilitator Superfamily
LIS83_11925	COG0776	regulation of translation
LIS83_11935	COG2318	DinB family
LIS83_11945	COG1115	amino acid carrier protein
LIS83_11960	COG2329	Antibiotic biosynthesis monooxygenase
LIS83_11965	COG1187	pseudouridine synthase activity
LIS83_11970	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
LIS83_11980	COG1136	(ABC) transporter
LIS83_11990	COG0596	Alpha beta hydrolase
LIS83_12015	COG2226	methyltransferase
LIS83_12060	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LIS83_12095	COG1247	-acetyltransferase
LIS83_12125	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
LIS83_12135	COG2226	methyltransferase
LIS83_12140	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LIS83_12150	COG1278	Cold shock
LIS83_12165	COG0010	Belongs to the arginase family
LIS83_12175	COG0583	DNA-binding transcription factor activity
LIS83_12180	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
LIS83_12195	COG0583	DNA-binding transcription factor activity
LIS83_12200	COG2258	MOSC domain
LIS83_12215	COG1132	(ABC) transporter
LIS83_12220	COG1132	(ABC) transporter
LIS83_12240	COG1396	sequence-specific DNA binding
LIS83_12270	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LIS83_12280	COG3075	Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor
LIS83_12285	COG1595	DNA-templated transcription, initiation
LIS83_12310	COG1649	PFAM Uncharacterised BCR, COG1649
LIS83_12335	COG2971	BadF BadG BcrA BcrD
LIS83_12345	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
LIS83_12380	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LIS83_12410	COG1309	transcriptional regulator
LIS83_12425	COG0577	efflux transmembrane transporter activity
LIS83_12425	COG1136	(ABC) transporter
LIS83_12430	COG0500	methyltransferase
LIS83_12430	COG3615	Tellurite resistance protein tehB
LIS83_12530	COG1846	Transcriptional regulator
LIS83_12565	COG2195	Cleaves the N-terminal amino acid of tripeptides
LIS83_12580	COG1595	DNA-templated transcription, initiation
LIS83_12590	COG0768	penicillin binding
LIS83_12595	COG0768	penicillin binding
LIS83_12600	COG2367	Beta-lactamase
LIS83_12605	COG1408	metallophosphoesterase
LIS83_12610	COG0675	Transposase, IS605 OrfB family
LIS83_12640	COG1960	acyl-CoA dehydrogenase activity
LIS83_12645	COG0439	Biotin carboxylase
LIS83_12650	COG0511	ligase activity, forming carbon-carbon bonds
LIS83_12655	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
LIS83_12660	COG1024	Enoyl-CoA hydratase
LIS83_12665	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
LIS83_12670	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
LIS83_12680	COG1247	-acetyltransferase
LIS83_12685	COG0572	uridine kinase
LIS83_12695	COG2318	DinB family
LIS83_12700	COG1686	Belongs to the peptidase S11 family
LIS83_12725	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
LIS83_12745	COG3227	Zinc metalloprotease (Elastase)
LIS83_12765	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
LIS83_12765	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
LIS83_12790	COG2814	Major facilitator Superfamily
LIS83_12830	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LIS83_12850	COG1063	alcohol dehydrogenase
LIS83_12870	COG3386	PFAM SMP-30 Gluconolaconase
LIS83_12880	COG1384	Belongs to the class-I aminoacyl-tRNA synthetase family
LIS83_12885	COG3773	Cell wall hydrolase
LIS83_12895	COG0745	RESPONSE REGULATOR receiver
LIS83_12900	COG2205	protein histidine kinase activity
LIS83_12910	COG0488	(ABC) transporter
LIS83_12925	COG1136	(ABC) transporter
LIS83_12930	COG0577	efflux transmembrane transporter activity
LIS83_12950	COG0460	homoserine dehydrogenase
LIS83_12955	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LIS83_12965	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
LIS83_13040	COG2124	cytochrome p450
LIS83_13075	COG0561	phosphatase activity
LIS83_13110	COG5002	protein histidine kinase activity
LIS83_13115	COG0768	penicillin binding
LIS83_13120	COG1819	glycosyl
LIS83_13125	COG1794	racemase activity, acting on amino acids and derivatives
LIS83_13150	COG2205	protein histidine kinase activity
LIS83_13160	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
LIS83_13165	COG0604	alcohol dehydrogenase
LIS83_13170	COG0671	phosphoesterase, PA-phosphatase related
LIS83_13175	COG0768	penicillin binding
LIS83_13185	COG1028	Short-chain dehydrogenase reductase Sdr
LIS83_13195	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
LIS83_13230	COG0693	protein deglycase activity
LIS83_13260	COG0071	Belongs to the small heat shock protein (HSP20) family
LIS83_13265	COG2207	Transcriptional regulator
LIS83_13265	COG3708	Transcriptional regulator
LIS83_13295	COG2814	Major facilitator Superfamily
LIS83_13310	COG0584	glycerophosphoryl diester phosphodiesterase
LIS83_13330	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LIS83_13335	COG0697	spore germination
LIS83_13360	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
LIS83_13370	COG2223	nitrite transmembrane transporter activity
LIS83_13375	COG2816	NAD+ diphosphatase activity
LIS83_13380	COG0592	DNA-directed DNA polymerase activity
LIS83_13385	COG1051	belongs to the nudix hydrolase family
LIS83_13410	COG0406	alpha-ribazole phosphatase activity
LIS83_13420	COG3878	Protein conserved in bacteria
LIS83_13445	COG4667	esterase of the alpha-beta hydrolase superfamily
LIS83_13470	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LIS83_13485	COG0322	excinuclease ABC activity
LIS83_13520	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LIS83_13545	COG1011	Hydrolase
LIS83_13565	COG1523	belongs to the glycosyl hydrolase 13 family
LIS83_13570	COG3227	Zinc metalloprotease (Elastase)
LIS83_13590	COG0346	lactoylglutathione lyase activity
LIS83_13595	COG0201	protein transport
LIS83_13605	COG0697	spore germination
LIS83_13610	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LIS83_13645	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LIS83_13660	COG2959	enzyme of heme biosynthesis
LIS83_13695	COG1309	transcriptional regulator
LIS83_13720	COG3284	Transcriptional regulator
LIS83_13735	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LIS83_13740	COG1349	DNA-binding transcription factor activity
LIS83_13760	COG1959	2 iron, 2 sulfur cluster binding
LIS83_13775	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LIS83_13780	COG0508	dehydrogenase complex catalyzes the overall conversion of
LIS83_13785	COG0022	dehydrogenase e1 component
LIS83_13790	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
LIS83_13800	COG1028	Short-chain dehydrogenase reductase Sdr
LIS83_13805	COG0456	acetyltransferase
LIS83_13805	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
LIS83_13810	COG0572	uridine kinase
LIS83_13820	COG0494	nUDIX hydrolase
LIS83_13845	COG4176	ABC-type proline glycine betaine transport system permease component
LIS83_13850	COG4175	Glycine betaine
LIS83_13850	COG0517	IMP dehydrogenase activity
LIS83_13880	COG2153	protein acetylation
LIS83_13885	COG3397	chitin binding
LIS83_13900	COG2205	protein histidine kinase activity
LIS83_13905	COG2226	methyltransferase
LIS83_13910	COG2315	Protein conserved in bacteria
LIS83_13915	COG2153	protein acetylation
LIS83_13920	COG0658	competence protein
LIS83_13920	COG2333	competence protein COMEC
LIS83_13970	COG3973	AAA domain
LIS83_13985	COG2105	PFAM AIG2 family protein
LIS83_13990	COG0514	ATP-dependent DNA helicase (RecQ)
LIS83_14015	COG4637	Psort location Cytoplasmic, score
LIS83_14040	COG3397	chitin binding
LIS83_14055	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
LIS83_14060	COG1115	amino acid carrier protein
LIS83_14065	COG1012	belongs to the aldehyde dehydrogenase family
LIS83_14070	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LIS83_14080	COG3938	Belongs to the proline racemase family
LIS83_14085	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LIS83_14125	COG0586	Pfam SNARE associated Golgi protein
LIS83_14140	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
LIS83_14150	COG4166	transmembrane transport
LIS83_14160	COG4948	Mandelate Racemase Muconate Lactonizing
LIS83_14205	COG2936	dipeptidyl-peptidase activity
LIS83_14210	COG5002	protein histidine kinase activity
LIS83_14215	COG0745	RESPONSE REGULATOR receiver
LIS83_14245	COG1164	Oligoendopeptidase f
LIS83_14250	COG0531	amino acid
LIS83_14255	COG1522	sequence-specific DNA binding
LIS83_14260	COG1307	EDD domain protein, DegV family
LIS83_14295	COG2814	Major facilitator Superfamily
LIS83_14305	COG1664	Polymer-forming cytoskeletal
LIS83_14310	COG0789	Transcriptional regulator
LIS83_14315	COG4533	DNA binding
LIS83_14320	COG2814	Major facilitator Superfamily
LIS83_14320	COG0477	Major facilitator Superfamily
LIS83_14340	COG2261	transglycosylase associated protein
LIS83_14355	COG2226	methyltransferase
LIS83_14385	COG0436	Aminotransferase
LIS83_14390	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
LIS83_14395	COG5146	pantothenate kinase activity
LIS83_14400	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
LIS83_14415	COG1131	(ABC) transporter
LIS83_14460	COG0628	permease
LIS83_14475	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LIS83_14480	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LIS83_14485	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
LIS83_14490	COG1116	anion transmembrane transporter activity
LIS83_14500	COG2816	NAD+ diphosphatase activity
LIS83_14520	COG2746	aminoglycoside 3-N-acetyltransferase activity
LIS83_14545	COG0697	spore germination
LIS83_14550	COG2318	DinB family
LIS83_14590	COG0861	Integral membrane protein TerC family
LIS83_14595	COG1368	sulfuric ester hydrolase activity
LIS83_14600	COG0488	(ABC) transporter
LIS83_14610	COG1033	growth of symbiont in host cell
LIS83_14610	COG2409	Drug exporters of the RND superfamily
LIS83_14615	COG1309	transcriptional regulator
LIS83_14630	COG0287	Prephenate dehydrogenase
LIS83_14635	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
LIS83_14645	COG1605	Chorismate mutase
LIS83_14645	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
LIS83_14680	COG3584	3D domain protein
LIS83_14680	COG1388	LysM domain
LIS83_14690	COG2610	gluconate transmembrane transporter activity
LIS83_14695	COG1024	Enoyl-CoA hydratase
LIS83_14705	COG3290	protein histidine kinase activity
LIS83_14705	COG3829	transcription factor binding
LIS83_14720	COG1879	ABC-type sugar transport system periplasmic component
LIS83_14730	COG1172	Belongs to the binding-protein-dependent transport system permease family
LIS83_14740	COG2390	Transcriptional regulator
LIS83_14745	COG1070	Carbohydrate kinase
LIS83_14780	COG2329	Antibiotic biosynthesis monooxygenase
LIS83_14800	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LIS83_14810	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
LIS83_14815	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LIS83_14820	COG4187	Peptidase family M20/M25/M40
LIS83_14825	COG1414	Transcriptional regulator
LIS83_14830	COG0833	amino acid
LIS83_14835	COG1690	Belongs to the RtcB family
LIS83_14840	COG3239	Fatty acid desaturase
LIS83_14845	COG1785	Belongs to the alkaline phosphatase family
LIS83_14855	COG3655	Transcriptional regulator
LIS83_14870	COG4377	Putative membrane peptidase family (DUF2324)
LIS83_14880	COG3279	Response regulator of the LytR AlgR family
LIS83_14905	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LIS83_14910	COG0346	lactoylglutathione lyase activity
LIS83_14935	COG0714	Associated with various cellular activities
LIS83_14980	COG0463	Glycosyl transferase, family 2
LIS83_14990	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
LIS83_14995	COG0753	catalase activity
LIS83_15005	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
LIS83_15035	COG0778	Nitroreductase
LIS83_15040	COG1846	Transcriptional regulator
LIS83_15075	COG1725	Transcriptional regulator
LIS83_15090	COG1136	(ABC) transporter
LIS83_15090	COG0577	efflux transmembrane transporter activity
LIS83_15115	COG2207	Transcriptional regulator
LIS83_15120	COG0456	acetyltransferase
LIS83_15140	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LIS83_15165	COG0642	Histidine kinase
LIS83_15170	COG0745	RESPONSE REGULATOR receiver
LIS83_15175	COG0596	Alpha beta hydrolase
LIS83_15205	COG0730	response to heat
LIS83_15215	COG0833	amino acid
LIS83_15225	COG4335	DNA alkylation repair
LIS83_15255	COG0768	penicillin binding
LIS83_15260	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
LIS83_15290	COG1984	allophanate hydrolase subunit 2
LIS83_15295	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
LIS83_15300	COG1414	Transcriptional regulator
LIS83_15310	COG3142	Participates in the control of copper homeostasis
LIS83_15315	COG0860	N-Acetylmuramoyl-L-alanine amidase
LIS83_15320	COG0640	Transcriptional regulator
LIS83_15330	COG1960	acyl-CoA dehydrogenase activity
LIS83_15345	COG3314	Sporulation integral membrane protein YlbJ
LIS83_15370	COG3848	Pyruvate phosphate dikinase
LIS83_15370	COG0574	Belongs to the PEP-utilizing enzyme family
LIS83_15375	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LIS83_15390	COG5577	PFAM Coat F domain
LIS83_15395	COG3403	YqcI/YcgG family
LIS83_15400	COG1280	lysine exporter protein (LysE YggA)
LIS83_15405	COG1113	amino acid transport
LIS83_15435	COG1063	alcohol dehydrogenase
LIS83_15450	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LIS83_15465	COG0737	Belongs to the 5'-nucleotidase family
LIS83_15470	COG2329	Antibiotic biosynthesis monooxygenase
LIS83_15480	COG0598	Magnesium transport protein CorA
LIS83_15510	COG1063	alcohol dehydrogenase
LIS83_15520	COG2124	cytochrome p450
LIS83_15525	COG1309	transcriptional regulator
LIS83_15530	COG0657	acetylesterase activity
LIS83_15565	COG0288	reversible hydration of carbon dioxide
LIS83_15575	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
LIS83_15580	COG5609	conserved protein (DUF2294)
LIS83_15595	COG0714	Associated with various cellular activities
LIS83_15605	COG1575	Belongs to the MenA family. Type 1 subfamily
LIS83_15610	COG2267	carboxylic ester hydrolase activity
LIS83_15615	COG0803	Belongs to the bacterial solute-binding protein 9 family
LIS83_15620	COG1108	ABC-type Mn2 Zn2 transport systems permease components
LIS83_15625	COG1121	(ABC) transporter
LIS83_15655	COG0798	PFAM Bile acid sodium symporter
LIS83_15660	COG0346	lactoylglutathione lyase activity
LIS83_15665	COG0640	Transcriptional regulator
LIS83_15680	COG0443	Heat shock 70 kDa protein
LIS83_15700	COG0346	lactoylglutathione lyase activity
LIS83_15740	COG2814	Major facilitator Superfamily
LIS83_15765	COG0745	RESPONSE REGULATOR receiver
LIS83_15770	COG5002	protein histidine kinase activity
LIS83_15770	COG3850	Histidine kinase
LIS83_15795	COG2515	1-aminocyclopropane-1-carboxylate deaminase
LIS83_15820	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LIS83_15825	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LIS83_15835	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LIS83_15850	COG2309	aminopeptidase activity
LIS83_15860	COG0789	Transcriptional regulator
LIS83_15865	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
LIS83_15885	COG0577	efflux transmembrane transporter activity
LIS83_15900	COG5002	protein histidine kinase activity
LIS83_15900	COG3850	Histidine kinase
LIS83_15910	COG2364	Membrane
LIS83_15915	COG1846	Transcriptional regulator
LIS83_15920	COG0456	acetyltransferase
LIS83_15925	COG2808	Putative FMN-binding domain
LIS83_15930	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LIS83_15935	COG2271	Major facilitator Superfamily
LIS83_15940	COG1556	Lactate utilization protein
LIS83_15945	COG1139	Iron-sulfur cluster binding protein
LIS83_15955	COG0583	DNA-binding transcription factor activity
LIS83_15975	COG1619	proteins homologs of microcin C7 resistance protein MccF
LIS83_15990	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
LIS83_16010	COG1595	DNA-templated transcription, initiation
LIS83_16025	COG0662	Cupin 2, conserved barrel domain protein
LIS83_16030	COG2207	Transcriptional regulator
LIS83_16030	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LIS83_16060	COG5632	N-Acetylmuramoyl-L-alanine amidase
LIS83_16060	COG3409	Peptidoglycan-binding domain 1 protein
LIS83_16075	COG2814	Major facilitator Superfamily
LIS83_16115	COG0477	Major facilitator Superfamily
LIS83_16125	COG1846	Transcriptional regulator
LIS83_16130	COG2814	Major facilitator Superfamily
LIS83_16140	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
LIS83_16145	COG1131	(ABC) transporter
LIS83_16165	COG2076	Multidrug Resistance protein
LIS83_16170	COG1309	transcriptional regulator
LIS83_16185	COG2031	fatty acid transporter
LIS83_16195	COG2249	NAD(P)H dehydrogenase (quinone) activity
LIS83_16230	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LIS83_16250	COG1288	antiporter activity
LIS83_16255	COG2356	endonuclease I
LIS83_16260	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
LIS83_16270	COG2197	response regulator
LIS83_16290	COG1733	regulation of RNA biosynthetic process
LIS83_16295	COG0778	Nitroreductase
LIS83_16305	COG0469	pyruvate kinase activity
LIS83_16325	COG1028	Short-chain dehydrogenase reductase Sdr
LIS83_16335	COG1131	(ABC) transporter
LIS83_16375	COG1011	Hydrolase
LIS83_16395	COG2365	Tyrosine phosphatase family
LIS83_16420	COG0346	lactoylglutathione lyase activity
LIS83_16425	COG1940	carbohydrate kinase activity
LIS83_16430	COG0110	maltose O-acetyltransferase activity
LIS83_16440	COG1136	(ABC) transporter
LIS83_16440	COG0577	efflux transmembrane transporter activity
LIS83_16460	COG0628	permease
LIS83_16480	COG2226	methyltransferase
LIS83_16490	COG0477	Major facilitator Superfamily
LIS83_16520	COG1253	flavin adenine dinucleotide binding
LIS83_16525	COG0789	Transcriptional regulator
LIS83_16530	COG0697	spore germination
LIS83_16535	COG1357	PFAM Pentapeptide repeats (8 copies)
LIS83_16540	COG3813	Protein conserved in bacteria
LIS83_16545	COG2706	6-phosphogluconolactonase activity
LIS83_16550	COG1070	Carbohydrate kinase
LIS83_16560	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
LIS83_16565	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
LIS83_16575	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
LIS83_16615	COG0814	amino acid
LIS83_16640	COG1393	Belongs to the ArsC family
LIS83_16650	COG2188	Transcriptional regulator
LIS83_16655	COG0673	inositol 2-dehydrogenase activity
LIS83_16690	COG0384	phenazine biosynthesis protein PhzF
LIS83_16705	COG0318	PFAM AMP-dependent synthetase and ligase
LIS83_16710	COG2249	NAD(P)H dehydrogenase (quinone) activity
LIS83_16715	COG1733	regulation of RNA biosynthetic process
LIS83_16735	COG1191	sigma factor activity
LIS83_16745	COG1266	CAAX protease self-immunity
LIS83_16750	COG1309	transcriptional regulator
LIS83_16790	COG1151	hydroxylamine reductase activity
LIS83_16805	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LIS83_16810	COG3409	Peptidoglycan-binding domain 1 protein
LIS83_16810	COG3757	hydrolase, family 25
LIS83_16845	COG2072	flavoprotein involved in K transport
LIS83_16890	COG1113	amino acid transport
LIS83_16895	COG2814	Major facilitator Superfamily
LIS83_16920	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
LIS83_16925	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
LIS83_16940	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LIS83_16945	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LIS83_16950	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LIS83_16955	COG3739	integral membrane protein
LIS83_16960	COG0384	phenazine biosynthesis protein PhzF
LIS83_16980	COG0583	DNA-binding transcription factor activity
LIS83_17000	COG1193	negative regulation of DNA recombination
LIS83_17020	COG2162	N-hydroxyarylamine O-acetyltransferase activity
LIS83_17025	COG1164	Oligoendopeptidase f
LIS83_17030	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
LIS83_17060	COG0584	glycerophosphoryl diester phosphodiesterase
LIS83_17085	COG0640	Transcriptional regulator
LIS83_17090	COG0604	alcohol dehydrogenase
LIS83_17100	COG0457	Tetratricopeptide repeat
LIS83_17110	COG2808	Putative FMN-binding domain
LIS83_17125	COG0385	Bile acid
LIS83_17130	COG0277	FAD linked oxidase domain protein
LIS83_17160	COG1216	Glycosyl transferase, family 2
LIS83_17165	COG1024	Enoyl-CoA hydratase
LIS83_17175	COG1285	pathogenesis
LIS83_17190	COG2514	catechol 2,3-dioxygenase activity
LIS83_17195	COG2720	vancomycin resistance protein
LIS83_17230	COG0716	FMN binding
LIS83_17260	COG1028	Short-chain dehydrogenase reductase Sdr
LIS83_17270	COG0165	Argininosuccinate lyase
LIS83_17285	COG4145	pantothenate transmembrane transporter activity
LIS83_17295	COG1012	belongs to the aldehyde dehydrogenase family
LIS83_17300	COG1028	Short-chain dehydrogenase reductase Sdr
LIS83_17310	COG1657	PFAM Prenyltransferase squalene oxidase
LIS83_17315	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
LIS83_17320	COG2962	Rard protein
LIS83_17325	COG3326	Membrane
LIS83_17340	COG0489	protein tyrosine kinase activity
LIS83_17350	COG0314	molybdopterin synthase activity
LIS83_17355	COG0303	'Molybdopterin
LIS83_17360	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
LIS83_17365	COG2116	formate transmembrane transporter activity
LIS83_17375	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
LIS83_17380	COG5609	conserved protein (DUF2294)
LIS83_17385	COG2427	Protein of unknown function (DUF1641)
LIS83_17390	COG3383	formate dehydrogenase (NAD+) activity
LIS83_17395	COG0697	spore germination
LIS83_17435	COG2226	methyltransferase
LIS83_17440	COG4166	transmembrane transport
LIS83_17450	COG4166	transmembrane transport
LIS83_17455	COG4166	transmembrane transport
LIS83_17460	COG1301	dicarboxylic acid transport
LIS83_17465	COG1316	TRANSCRIPTIONal
LIS83_17475	COG1595	DNA-templated transcription, initiation
LIS83_17495	COG1131	(ABC) transporter
LIS83_17505	COG0673	inositol 2-dehydrogenase activity
LIS83_17510	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LIS83_17515	COG0187	DNA topoisomerase II activity
LIS83_17520	COG1832	CoA-binding protein
LIS83_17525	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LIS83_17530	COG0745	RESPONSE REGULATOR receiver
LIS83_17550	COG4841	protein insertion into membrane
LIS83_17555	COG0824	Thioesterase
LIS83_17585	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LIS83_17595	COG2274	protein secretion by the type I secretion system
LIS83_17600	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
LIS83_17640	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
LIS83_17655	COG0183	Belongs to the thiolase family
LIS83_17660	COG0318	PFAM AMP-dependent synthetase and ligase
LIS83_17665	COG1268	BioY protein
LIS83_17670	COG0318	PFAM AMP-dependent synthetase and ligase
LIS83_17680	COG1396	sequence-specific DNA binding
LIS83_17730	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LIS83_17740	COG5002	protein histidine kinase activity
LIS83_17745	COG0400	carboxylic ester hydrolase activity
LIS83_17750	COG0346	lactoylglutathione lyase activity
LIS83_17755	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LIS83_17760	COG0069	glutamate synthase activity
LIS83_17765	COG1902	pentaerythritol trinitrate reductase activity
LIS83_17770	COG1329	Transcriptional regulator
LIS83_17775	COG0010	Belongs to the arginase family
LIS83_17800	COG2226	methyltransferase
LIS83_17840	COG4846	Membrane protein involved in cytochrome C biogenesis
LIS83_17845	COG0785	Cytochrome C biogenesis protein
LIS83_17855	COG1473	amidohydrolase
LIS83_17865	COG1131	(ABC) transporter
LIS83_17875	COG0583	DNA-binding transcription factor activity
LIS83_17885	COG1346	cytolysis
LIS83_17900	COG0730	response to heat
LIS83_17910	COG5632	N-Acetylmuramoyl-L-alanine amidase
LIS83_17910	COG3409	Peptidoglycan-binding domain 1 protein
LIS83_17925	COG1132	(ABC) transporter
LIS83_17930	COG1132	(ABC) transporter
LIS83_17950	COG4886	Leucine-rich repeat (LRR) protein
LIS83_17950	COG4932	domain protein
LIS83_18025	COG3763	UPF0154 protein
LIS83_18045	COG3639	organic phosphonate transmembrane transporter activity
LIS83_18060	COG0737	Belongs to the 5'-nucleotidase family
LIS83_18070	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
LIS83_18090	COG1695	Transcriptional regulator
LIS83_18095	COG0174	glutamine synthetase
LIS83_18100	COG0789	Transcriptional regulator
LIS83_18105	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
LIS83_18110	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LIS83_18115	COG2860	membrane
LIS83_18120	COG0464	growth
LIS83_18150	COG1388	LysM domain
LIS83_18150	COG3584	3D domain protein
LIS83_18155	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LIS83_18155	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LIS83_18155	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LIS83_18160	COG1105	Belongs to the carbohydrate kinase PfkB family
LIS83_18165	COG1349	DNA-binding transcription factor activity
LIS83_18170	COG1979	alcohol dehydrogenase
LIS83_18175	COG2322	membrane
LIS83_18185	COG1113	amino acid transport
LIS83_18200	COG1408	metallophosphoesterase
LIS83_18205	COG2116	formate transmembrane transporter activity
LIS83_18215	COG2217	Heavy metal translocating P-type atpase
LIS83_18220	COG2608	mercury ion transmembrane transporter activity
LIS83_18225	COG1937	Protein conserved in bacteria
LIS83_18245	COG2819	hydrolase of the alpha beta superfamily
LIS83_18250	COG1120	ATPase activity
LIS83_18255	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LIS83_18260	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LIS83_18265	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LIS83_18270	COG0708	Exodeoxyribonuclease III
LIS83_18275	COG2169	Transcriptional regulator
LIS83_18280	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
LIS83_18285	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
LIS83_18295	COG2364	Membrane
LIS83_18310	COG2267	carboxylic ester hydrolase activity
LIS83_18315	COG0346	lactoylglutathione lyase activity
LIS83_18320	COG3300	MHYT domain
LIS83_18320	COG5001	Diguanylate cyclase
LIS83_18380	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LIS83_18405	COG1404	Belongs to the peptidase S8 family
LIS83_18410	COG3773	Cell wall hydrolase
LIS83_18420	COG1368	sulfuric ester hydrolase activity
LIS83_18425	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
LIS83_18435	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
LIS83_18475	COG1476	TRANSCRIPTIONal
LIS83_18510	COG0798	PFAM Bile acid sodium symporter
LIS83_18515	COG0640	Transcriptional regulator
LIS83_18535	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
LIS83_18545	COG3620	sequence-specific DNA binding
LIS83_18565	COG0306	phosphate transporter
LIS83_18570	COG0640	Transcriptional regulator
LIS83_18585	COG1846	Transcriptional regulator
LIS83_18615	COG4550	Control of competence regulator ComK, YlbF/YmcA
LIS83_18625	COG1013	pyruvate-flavodoxin oxidoreductase activity
LIS83_18630	COG0674	pyruvate-flavodoxin oxidoreductase activity
LIS83_18630	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
LIS83_18640	COG2359	stage V sporulation protein S
LIS83_18645	COG1692	metallophosphoesterase
LIS83_18670	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LIS83_18675	COG1426	Protein conserved in bacteria
LIS83_18690	COG0300	oxidoreductase activity
LIS83_18695	COG0612	Peptidase, M16
LIS83_18700	COG0612	Peptidase, M16
LIS83_18705	COG1079	Belongs to the binding-protein-dependent transport system permease family
LIS83_18710	COG4603	Belongs to the binding-protein-dependent transport system permease family
LIS83_18715	COG3845	ABC transporter
LIS83_18720	COG1744	ABC transporter substrate-binding protein PnrA-like
LIS83_18725	COG2188	Transcriptional regulator
LIS83_18730	COG1674	ftsk spoiiie
LIS83_18740	COG0740	serine-type endopeptidase activity
LIS83_18745	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LIS83_18755	COG0527	aspartate kinase activity
LIS83_18760	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
LIS83_18765	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
LIS83_18770	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LIS83_18775	COG1873	PFAM PRC-barrel domain
LIS83_18780	COG0612	Peptidase, M16
LIS83_18785	COG0726	polysaccharide deacetylase
LIS83_18800	COG0196	riboflavin kinase activity
LIS83_18815	COG1550	Protein conserved in bacteria
LIS83_18825	COG1358	cellular component organization or biogenesis
LIS83_18830	COG2740	Nucleic-acid-binding protein implicated in transcription termination
LIS83_18835	COG0195	Participates in both transcription termination and antitermination
LIS83_18865	COG0750	zinc metalloprotease
LIS83_18875	COG4589	Belongs to the CDS family
LIS83_18890	COG0528	UMP kinase activity
LIS83_18920	COG4974	Belongs to the 'phage' integrase family
LIS83_18930	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LIS83_18935	COG0758	DNA mediated transformation
LIS83_18940	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
LIS83_18980	COG1837	Belongs to the UPF0109 family
LIS83_18990	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
LIS83_19000	COG0552	protein localization to endoplasmic reticulum
LIS83_19005	COG1196	nuclear chromosome segregation
LIS83_19015	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LIS83_19020	COG1028	Short-chain dehydrogenase reductase Sdr
LIS83_19025	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
LIS83_19040	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
LIS83_19045	COG1461	Dihydroxyacetone kinase
LIS83_19050	COG1302	Protein conserved in bacteria
LIS83_19065	COG1564	THIamine pyrophosphokinase
LIS83_19070	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
LIS83_19075	COG1162	GTPase activity
LIS83_19080	COG2815	serine threonine protein kinase
LIS83_19080	COG0515	serine threonine protein kinase
LIS83_19085	COG0631	protein serine/threonine phosphatase activity
LIS83_19095	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
LIS83_19095	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LIS83_19105	COG0242	peptide deformylase activity
LIS83_19110	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
LIS83_19115	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
LIS83_19135	COG1561	YicC-like family, N-terminal region
LIS83_19140	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
LIS83_19170	COG3069	C4-dicarboxylate transmembrane transporter activity
LIS83_19230	COG0564	pseudouridine synthase activity
LIS83_19250	COG3599	regulation of cell shape
LIS83_19255	COG2302	S4 RNA-binding domain
LIS83_19260	COG0762	integral membrane protein
LIS83_19270	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
LIS83_19275	COG1496	oxidoreductase activity
LIS83_19280	COG1873	PFAM PRC-barrel domain
LIS83_19285	COG1191	sigma factor activity
LIS83_19290	COG1191	sigma factor activity
LIS83_19300	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
LIS83_19305	COG0849	cell division
LIS83_19310	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
LIS83_19315	COG0812	UDP-N-acetylmuramate dehydrogenase activity
LIS83_19325	COG0772	Belongs to the SEDS family
LIS83_19340	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
LIS83_19345	COG0768	penicillin binding
LIS83_19350	COG0768	penicillin binding
LIS83_19355	COG4839	cell division protein FtsL
LIS83_19370	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
LIS83_19385	COG0333	Belongs to the bacterial ribosomal protein bL32 family
LIS83_19390	COG1399	metal-binding, possibly nucleic acid-binding protein
LIS83_19400	COG3480	Lon protease (S16) C-terminal proteolytic domain
LIS83_19405	COG1752	Esterase of the alpha-beta hydrolase superfamily
LIS83_19410	COG3314	Sporulation integral membrane protein YlbJ
LIS83_19420	COG0742	ribosomal rna small subunit methyltransferase
LIS83_19435	COG3679	Belongs to the UPF0342 family
LIS83_19440	COG0406	alpha-ribazole phosphatase activity
LIS83_19455	COG2340	Cysteine-rich secretory protein family
LIS83_19470	COG3336	cytochrome c oxidase
LIS83_19505	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
LIS83_19510	COG0772	Belongs to the SEDS family
LIS83_19520	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
LIS83_19525	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
LIS83_19535	COG4896	Protein conserved in bacteria
LIS83_19550	COG1217	gtp-binding protein TYPA
LIS83_19560	COG0483	inositol monophosphate 1-phosphatase activity
LIS83_19580	COG1982	Orn Lys Arg decarboxylase major
LIS83_19630	COG0022	dehydrogenase e1 component
LIS83_19635	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
LIS83_19645	COG0242	peptide deformylase activity
LIS83_19650	COG0561	phosphatase activity
LIS83_19660	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LIS83_19665	COG0569	domain protein
LIS83_19685	COG0583	DNA-binding transcription factor activity
LIS83_19690	COG0517	IMP dehydrogenase activity
LIS83_19700	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
LIS83_19710	COG4703	Protein of unknown function (DUF1797)
LIS83_19725	COG2200	EAL domain
LIS83_19730	COG1028	Short-chain dehydrogenase reductase Sdr
LIS83_19735	COG1408	metallophosphoesterase
LIS83_19745	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
LIS83_19780	COG2814	Major facilitator Superfamily
LIS83_19800	COG3209	COG3209 Rhs family protein
LIS83_19810	COG2205	protein histidine kinase activity
LIS83_19820	COG0436	Aminotransferase
LIS83_19825	COG1609	Transcriptional regulator
LIS83_19830	COG3833	ABC-type maltose transport systems, permease component
LIS83_19835	COG1175	transmembrane transport
LIS83_19840	COG2182	Extracellular solute-binding protein
LIS83_19850	COG0366	Alpha amylase catalytic
LIS83_19855	COG3842	ATPase activity
LIS83_19900	COG0183	Belongs to the thiolase family
LIS83_19935	COG1695	Transcriptional regulator
LIS83_19940	COG1028	Short-chain dehydrogenase reductase Sdr
LIS83_19960	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LIS83_19965	COG0436	Aminotransferase
LIS83_20000	COG2084	Dehydrogenase
LIS83_20005	COG2199	diguanylate cyclase activity
LIS83_20010	COG0778	Nitroreductase
LIS83_20035	COG1263	PTS System
LIS83_20035	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LIS83_20035	COG2190	(PTS) system
LIS83_20040	COG3711	transcriptional antiterminator
LIS83_20050	COG2188	Transcriptional regulator
LIS83_20060	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
LIS83_20085	COG1547	Domain of unknown function (DUF309)
LIS83_20090	COG0456	acetyltransferase
LIS83_20100	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LIS83_20105	COG4086	secreted protein
LIS83_20110	COG0561	phosphatase activity
LIS83_20115	COG0697	spore germination
LIS83_20130	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LIS83_20155	COG0733	neurotransmitter:sodium symporter activity
LIS83_20175	COG1686	Belongs to the peptidase S11 family
LIS83_20180	COG1725	Transcriptional regulator
LIS83_20185	COG1131	(ABC) transporter
LIS83_20200	COG1846	Transcriptional regulator
LIS83_20215	COG0598	Magnesium transport protein CorA
LIS83_20240	COG4974	Belongs to the 'phage' integrase family
LIS83_20250	COG0735	belongs to the Fur family
LIS83_20255	COG1300	Membrane
LIS83_20275	COG0667	Aldo Keto reductase
LIS83_20280	COG0656	L-ascorbic acid biosynthetic process
LIS83_20285	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
LIS83_20285	COG0456	acetyltransferase
LIS83_20295	COG4085	toxin activity
LIS83_20295	COG1525	nuclease
LIS83_20295	COG0737	Belongs to the 5'-nucleotidase family
LIS83_20305	COG0596	Alpha beta hydrolase
LIS83_20310	COG2056	Na+-H+ antiporter family
LIS83_20315	COG1609	Transcriptional regulator
LIS83_20320	COG0456	acetyltransferase
LIS83_20325	COG1073	alpha beta
LIS83_20340	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LIS83_20340	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LIS83_20345	COG0307	riboflavin synthase, alpha
LIS83_20370	COG4106	trans-aconitate 2-methyltransferase activity
LIS83_20375	COG1073	alpha beta
LIS83_20375	COG2226	methyltransferase
LIS83_20390	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
LIS83_20400	COG1757	Na H antiporter
LIS83_20405	COG0737	Belongs to the 5'-nucleotidase family
LIS83_20415	COG1522	sequence-specific DNA binding
LIS83_20435	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
LIS83_20445	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
LIS83_20460	COG0300	oxidoreductase activity
LIS83_20465	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LIS83_20470	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LIS83_20475	COG1760	l-serine dehydratase
LIS83_20480	COG1760	l-serine dehydratase
LIS83_20500	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LIS83_20510	COG2195	Cleaves the N-terminal amino acid of tripeptides
LIS83_20515	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LIS83_20530	COG1376	ErfK ybiS ycfS ynhG family protein
LIS83_20535	COG4129	membrane
LIS83_20540	COG1126	abc transporter atp-binding protein
LIS83_20545	COG0765	amino acid transport
LIS83_20550	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LIS83_20565	COG2816	NAD+ diphosphatase activity
LIS83_20570	COG0772	Belongs to the SEDS family
LIS83_20575	COG0508	dehydrogenase complex catalyzes the overall conversion of
LIS83_20580	COG0022	dehydrogenase e1 component
LIS83_20585	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
LIS83_20590	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LIS83_20605	COG0280	phosphate acetyltransferase
LIS83_20610	COG3290	protein histidine kinase activity
LIS83_20610	COG3829	transcription factor binding
LIS83_20620	COG0584	glycerophosphoryl diester phosphodiesterase
LIS83_20625	COG3093	addiction module antidote protein HigA
LIS83_20635	COG0745	RESPONSE REGULATOR receiver
LIS83_20640	COG0750	zinc metalloprotease
LIS83_20645	COG0497	DNA recombination
LIS83_20655	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
LIS83_20665	COG0142	geranyltranstransferase activity
LIS83_20690	COG1302	Protein conserved in bacteria
LIS83_20695	COG0439	Biotin carboxylase
LIS83_20700	COG0511	ligase activity, forming carbon-carbon bonds
LIS83_20745	COG3854	ATPases associated with a variety of cellular activities
LIS83_20770	COG0006	proline dipeptidase activity
LIS83_20785	COG3872	metal-dependent enzyme
LIS83_20795	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LIS83_20810	COG1695	Transcriptional regulator
LIS83_20825	COG0095	Lipoate-protein ligase
LIS83_20830	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LIS83_20835	COG1609	Transcriptional regulator
LIS83_20845	COG2076	Multidrug Resistance protein
LIS83_20850	COG2076	Multidrug Resistance protein
LIS83_20885	COG1131	(ABC) transporter
LIS83_20890	COG1725	Transcriptional regulator
LIS83_20920	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
LIS83_20975	COG4970	Tfp pilus assembly protein FimT
LIS83_20985	COG1459	type II secretion system
LIS83_20990	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
LIS83_21040	COG1410	methionine synthase
LIS83_21040	COG0646	methionine synthase
LIS83_21045	COG0646	methionine synthase
LIS83_21045	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
LIS83_21050	COG0626	cystathionine gamma-synthase activity
LIS83_21055	COG0626	cystathionine gamma-synthase activity
LIS83_21075	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LIS83_21085	COG1940	carbohydrate kinase activity
LIS83_21090	COG4483	Protein conserved in bacteria
LIS83_21095	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
LIS83_21100	COG0267	Belongs to the bacterial ribosomal protein bL33 family
LIS83_21105	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
LIS83_21110	COG0704	Plays a role in the regulation of phosphate uptake
LIS83_21120	COG0581	inorganic phosphate transmembrane transporter activity
LIS83_21125	COG0573	inorganic phosphate transmembrane transporter activity
LIS83_21130	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
LIS83_21135	COG0768	penicillin binding
LIS83_21140	COG0477	Major facilitator Superfamily
LIS83_21145	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
LIS83_21170	COG0735	belongs to the Fur family
LIS83_21175	COG1108	ABC-type Mn2 Zn2 transport systems permease components
LIS83_21180	COG1121	(ABC) transporter
LIS83_21185	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LIS83_21215	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
LIS83_21220	COG2384	SAM-dependent methyltransferase
LIS83_21225	COG2010	Cytochrome c
LIS83_21230	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
LIS83_21235	COG0358	DNA primase activity
LIS83_21245	COG0517	IMP dehydrogenase activity
LIS83_21260	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
LIS83_21265	COG0295	cytidine deaminase activity
LIS83_21270	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
LIS83_21280	COG1480	7TM receptor with intracellular HD hydrolase
LIS83_21285	COG1702	phosphate starvation-inducible protein PhoH
LIS83_21300	COG1610	YqeY-like protein
LIS83_21305	COG0828	Belongs to the bacterial ribosomal protein bS21 family
LIS83_21310	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
LIS83_21315	COG1385	rRNA (uridine-N3-)-methyltransferase activity
LIS83_21345	COG0635	Involved in the biosynthesis of porphyrin-containing compound
LIS83_21350	COG1733	regulation of RNA biosynthetic process
LIS83_21375	COG1466	dna polymerase III delta subunit
LIS83_21385	COG2333	competence protein COMEC
LIS83_21385	COG0658	competence protein
LIS83_21390	COG2131	deaminase
LIS83_21395	COG1596	polysaccharide export
LIS83_21395	COG1555	photosystem II stabilization
LIS83_21400	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LIS83_21405	COG2226	methyltransferase
LIS83_21410	COG0799	negative regulation of ribosome biogenesis
LIS83_21415	COG1713	HD superfamily hydrolase involved in NAD metabolism
LIS83_21425	COG1534	Rna-binding protein
LIS83_21435	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
LIS83_21440	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
LIS83_21465	COG1595	DNA-templated transcription, initiation
LIS83_21475	COG0778	Nitroreductase
LIS83_21480	COG2357	RelA SpoT domain protein
LIS83_21490	COG1785	Belongs to the alkaline phosphatase family
LIS83_21500	COG2267	carboxylic ester hydrolase activity
LIS83_21535	COG1404	Belongs to the peptidase S8 family
LIS83_21540	COG3186	Phenylalanine-4-hydroxylase
LIS83_21550	COG2514	catechol 2,3-dioxygenase activity
LIS83_21555	COG2259	Doxx family
LIS83_21595	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LIS83_21605	COG1012	belongs to the aldehyde dehydrogenase family
LIS83_21605	COG1454	alcohol dehydrogenase
LIS83_21610	COG0626	cystathionine gamma-synthase activity
LIS83_21615	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
LIS83_21640	COG0768	penicillin binding
LIS83_21655	COG0826	peptidase U32
LIS83_21660	COG0826	peptidase U32
LIS83_21665	COG4122	O-methyltransferase activity
LIS83_21670	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
LIS83_21700	COG0628	permease
LIS83_21720	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
LIS83_21735	COG1104	cysteine desulfurase activity
LIS83_21740	COG1959	2 iron, 2 sulfur cluster binding
LIS83_21745	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
LIS83_21755	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
LIS83_21780	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LIS83_21790	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
LIS83_21790	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
LIS83_21795	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
LIS83_21800	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LIS83_21800	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LIS83_21810	COG2244	polysaccharide biosynthetic process
LIS83_21815	COG2323	membrane
LIS83_21825	COG1862	Preprotein translocase
LIS83_21855	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
LIS83_21865	COG0697	spore germination
LIS83_21870	COG0640	Transcriptional regulator
LIS83_21895	COG0157	Belongs to the NadC ModD family
LIS83_21900	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
LIS83_21905	COG1104	cysteine desulfurase activity
LIS83_21910	COG1827	regulation of RNA biosynthetic process
LIS83_21915	COG2258	MOSC domain
LIS83_21920	COG0077	Prephenate dehydratase
LIS83_21925	COG0577	efflux transmembrane transporter activity
LIS83_21930	COG0577	efflux transmembrane transporter activity
LIS83_21935	COG1136	(ABC) transporter
LIS83_21940	COG5002	protein histidine kinase activity
LIS83_21945	COG0745	RESPONSE REGULATOR receiver
LIS83_21955	COG3290	protein histidine kinase activity
LIS83_21965	COG2868	ribosomal protein
LIS83_21975	COG1530	ribonuclease E activity
LIS83_21980	COG1994	Peptidase M50
LIS83_21985	COG0739	heme binding
LIS83_21990	COG2894	cell division
LIS83_22010	COG1077	Cell shape determining protein MreB Mrl
LIS83_22030	COG0285	dihydrofolate synthase activity
LIS83_22045	COG1388	LysM domain
LIS83_22055	COG0113	porphobilinogen synthase activity
LIS83_22060	COG1587	Uroporphyrinogen-III synthase
LIS83_22070	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
LIS83_22080	COG1846	Transcriptional regulator
LIS83_22085	COG1764	response to oxidative stress
LIS83_22100	COG0470	DNA polymerase III
LIS83_22100	COG1067	ATP-dependent peptidase activity
LIS83_22150	COG0622	Phosphoesterase
LIS83_22165	COG5401	PFAM Sporulation and spore germination
LIS83_22185	COG1309	transcriptional regulator
LIS83_22200	COG2197	response regulator
LIS83_22205	COG2233	PERMEase
LIS83_22210	COG0402	S-adenosylhomocysteine deaminase activity
LIS83_22220	COG1396	sequence-specific DNA binding
LIS83_22225	COG0697	spore germination
LIS83_22235	COG1959	2 iron, 2 sulfur cluster binding
LIS83_22240	COG1668	transmembrane transport
LIS83_22245	COG4152	abc transporter atp-binding protein
LIS83_22250	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
LIS83_22255	COG1360	Flagellar Motor Protein
LIS83_22260	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
LIS83_22265	COG1876	peptidase activity
LIS83_22270	COG0824	Thioesterase
LIS83_22275	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
LIS83_22280	COG1053	succinate dehydrogenase
LIS83_22285	COG2009	succinate dehydrogenase
LIS83_22290	COG1719	4-vinyl reductase, 4VR
LIS83_22300	COG3118	belongs to the thioredoxin family
LIS83_22305	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
LIS83_22310	COG2086	electron transfer activity
LIS83_22315	COG1024	Enoyl-CoA hydratase
LIS83_22320	COG1309	transcriptional regulator
LIS83_22325	COG0318	PFAM AMP-dependent synthetase and ligase
LIS83_22345	COG2318	DinB family
LIS83_22370	COG1131	(ABC) transporter
LIS83_22375	COG2205	protein histidine kinase activity
LIS83_22380	COG0745	RESPONSE REGULATOR receiver
LIS83_22390	COG4895	conserved protein (DUF2196)
LIS83_22395	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
LIS83_22410	COG4509	Sortase family
LIS83_22415	COG1120	ATPase activity
LIS83_22430	COG5386	Cell surface protein
LIS83_22435	COG5386	Cell surface protein
LIS83_22440	COG1114	Component of the transport system for branched-chain amino acids
LIS83_22445	COG1187	pseudouridine synthase activity
LIS83_22455	COG1796	DNA polymerase
LIS83_22455	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
LIS83_22460	COG1286	toxin biosynthetic process
LIS83_22505	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LIS83_22515	COG1418	mRNA catabolic process
LIS83_22550	COG2814	Major facilitator Superfamily
LIS83_22555	COG1566	PFAM secretion protein HlyD family protein
LIS83_22560	COG1309	transcriptional regulator
LIS83_22565	COG1363	Peptidase, m42
LIS83_22590	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
LIS83_22600	COG1484	DNA-dependent DNA replication
LIS83_22605	COG3611	Membrane attachment protein
LIS83_22615	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
LIS83_22620	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
LIS83_22625	COG0237	dephospho-CoA kinase activity
LIS83_22630	COG1971	Probably functions as a manganese efflux pump
LIS83_22640	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LIS83_22640	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LIS83_22645	COG5002	protein histidine kinase activity
LIS83_22650	COG0745	RESPONSE REGULATOR receiver
LIS83_22670	COG0538	isocitrate dehydrogenase activity
LIS83_22675	COG0372	Belongs to the citrate synthase family
LIS83_22685	COG0628	permease
LIS83_22690	COG3030	protein affecting phage T7 exclusion by the F plasmid
LIS83_22715	COG1725	Transcriptional regulator
LIS83_22720	COG0281	malic enzyme
LIS83_22725	COG0587	DNA-directed DNA polymerase activity
LIS83_22740	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
LIS83_22760	COG4109	DRTGG domain
LIS83_22775	COG0006	proline dipeptidase activity
LIS83_22820	COG0662	Cupin 2, conserved barrel domain protein
LIS83_22830	COG1476	TRANSCRIPTIONal
LIS83_22845	COG1028	Short-chain dehydrogenase reductase Sdr
LIS83_22850	COG0589	response to stress
LIS83_22890	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LIS83_22910	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
LIS83_22915	COG0827	DNA restriction-modification system
LIS83_22920	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
LIS83_22925	COG3874	Sporulation protein YtfJ
LIS83_22940	COG1574	metal-dependent hydrolase with the TIM-barrel fold
LIS83_22950	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
LIS83_22965	COG1104	cysteine desulfurase activity
LIS83_22975	COG0583	DNA-binding transcription factor activity
LIS83_22980	COG0697	spore germination
LIS83_22985	COG1309	transcriptional regulator
LIS83_22990	COG1956	GAF domain-containing protein
LIS83_23025	COG1595	DNA-templated transcription, initiation
LIS83_23035	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
LIS83_23040	COG0454	-acetyltransferase
LIS83_23045	COG0517	IMP dehydrogenase activity
LIS83_23050	COG0123	including yeast histone deacetylase and acetoin utilization protein
LIS83_23065	COG0745	RESPONSE REGULATOR receiver
LIS83_23070	COG5002	protein histidine kinase activity
LIS83_23075	COG0666	response to abiotic stimulus
LIS83_23110	COG1609	Transcriptional regulator
LIS83_23115	COG4851	CamS sex pheromone cAM373 precursor
LIS83_23120	COG3118	belongs to the thioredoxin family
LIS83_23130	COG2309	aminopeptidase activity
LIS83_23150	COG0577	efflux transmembrane transporter activity
LIS83_23155	COG1136	(ABC) transporter
LIS83_23170	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LIS83_23175	COG1695	Transcriptional regulator
LIS83_23195	COG1674	ftsk spoiiie
LIS83_23205	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LIS83_23215	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LIS83_23220	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
LIS83_23235	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LIS83_23250	COG0510	thiamine kinase activity
LIS83_23255	COG1523	belongs to the glycosyl hydrolase 13 family
LIS83_23265	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LIS83_23270	COG1349	DNA-binding transcription factor activity
LIS83_23275	COG1187	pseudouridine synthase activity
LIS83_23280	COG2244	polysaccharide biosynthetic process
LIS83_23285	COG2081	HI0933 family
LIS83_23290	COG2814	Major facilitator Superfamily
LIS83_23300	COG3832	glyoxalase III activity
LIS83_23320	COG1329	Transcriptional regulator
LIS83_23345	COG0314	molybdopterin synthase activity
LIS83_23350	COG1763	Mo-molybdopterin cofactor biosynthetic process
LIS83_23355	COG0303	'Molybdopterin
LIS83_23365	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
LIS83_23370	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
LIS83_23390	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LIS83_23400	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
LIS83_23445	COG2814	Major facilitator Superfamily
LIS83_23450	COG0475	glutathione-regulated potassium exporter activity
LIS83_23455	COG0490	domain, Protein
LIS83_23460	COG0582	viral genome integration into host DNA
LIS83_23470	COG1136	(ABC) transporter
LIS83_23490	COG1242	4 iron, 4 sulfur cluster binding
LIS83_23495	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
LIS83_23510	COG1794	racemase activity, acting on amino acids and derivatives
LIS83_23520	COG5504	Zn-dependent protease
LIS83_23545	COG2267	carboxylic ester hydrolase activity
LIS83_23550	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
LIS83_23555	COG0671	phosphoesterase, PA-phosphatase related
LIS83_23560	COG0438	transferase activity, transferring glycosyl groups
LIS83_23570	COG0521	Mo-molybdopterin cofactor biosynthetic process
LIS83_23635	COG0546	phosphoglycolate phosphatase activity
LIS83_23640	COG1349	DNA-binding transcription factor activity
LIS83_23650	COG5002	protein histidine kinase activity
LIS83_23655	COG4191	Histidine kinase
LIS83_23660	COG2267	carboxylic ester hydrolase activity
LIS83_23665	COG1368	sulfuric ester hydrolase activity
LIS83_23680	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
LIS83_23685	COG1116	anion transmembrane transporter activity
LIS83_23690	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LIS83_23715	COG0494	nUDIX hydrolase
LIS83_23750	COG0288	reversible hydration of carbon dioxide
LIS83_23755	COG1271	oxidase subunit
LIS83_23760	COG1294	oxidase, subunit
LIS83_23780	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LIS83_23805	COG1842	Phage shock protein A
LIS83_23870	COG3859	Proton-coupled thiamine transporter YuaJ
LIS83_23875	COG5002	protein histidine kinase activity
LIS83_23880	COG0745	RESPONSE REGULATOR receiver
LIS83_23905	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
LIS83_23910	COG1597	lipid kinase activity
LIS83_23940	COG0586	Pfam SNARE associated Golgi protein
LIS83_23950	COG0577	efflux transmembrane transporter activity
LIS83_23955	COG1136	(ABC) transporter
LIS83_23960	COG3708	Transcriptional regulator
LIS83_23960	COG2207	Transcriptional regulator
LIS83_23965	COG0745	RESPONSE REGULATOR receiver
LIS83_23970	COG2205	protein histidine kinase activity
LIS83_23975	COG0577	efflux transmembrane transporter activity
LIS83_23980	COG0577	efflux transmembrane transporter activity
LIS83_23985	COG1136	(ABC) transporter
LIS83_23990	COG0577	efflux transmembrane transporter activity
LIS83_24005	COG2188	Transcriptional regulator
LIS83_24025	COG3964	amidohydrolase
LIS83_24045	COG4948	Mandelate Racemase Muconate Lactonizing
LIS83_24055	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
LIS83_24060	COG0596	Alpha beta hydrolase
LIS83_24070	COG1169	isochorismate synthase
LIS83_24075	COG1575	Belongs to the MenA family. Type 1 subfamily
LIS83_24080	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
LIS83_24100	COG0058	SHG alpha-glucan phosphorylase activity
LIS83_24110	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
LIS83_24130	COG1404	Belongs to the peptidase S8 family
LIS83_24230	COG0544	peptidyl-prolyl cis-trans isomerase activity
LIS83_24265	COG1285	pathogenesis
LIS83_24270	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
LIS83_24285	COG2155	Conserved Protein
LIS83_24290	COG1098	S1 RNA binding domain
LIS83_24295	COG0436	Aminotransferase
LIS83_24300	COG1522	sequence-specific DNA binding
LIS83_24305	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LIS83_24310	COG2267	carboxylic ester hydrolase activity
LIS83_24320	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
LIS83_24340	COG5018	Exonuclease
LIS83_24345	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
LIS83_24365	COG2050	protein possibly involved in aromatic compounds catabolism
LIS83_24375	COG1268	BioY protein
LIS83_24380	COG1210	Utp--glucose-1-phosphate uridylyltransferase
LIS83_24385	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LIS83_24400	COG3584	3D domain protein
LIS83_24415	COG1252	NADH dehydrogenase
LIS83_24430	COG3708	Transcriptional regulator
LIS83_24445	COG1683	Conserved Protein
LIS83_24470	COG5632	N-Acetylmuramoyl-L-alanine amidase
LIS83_24675	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
LIS83_24690	COG0316	Belongs to the HesB IscA family
LIS83_24705	COG1252	NADH dehydrogenase
LIS83_24715	COG2274	protein secretion by the type I secretion system
LIS83_24720	COG0390	transport system, permease component
LIS83_24725	COG2824	Alkylphosphonate utilization operon protein PhnA
LIS83_24745	COG4837	Protein of unknown function (DUF1462)
LIS83_24750	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
LIS83_24760	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
LIS83_24765	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
LIS83_24780	COG0577	efflux transmembrane transporter activity
LIS83_24780	COG1136	(ABC) transporter
LIS83_24785	COG2249	NAD(P)H dehydrogenase (quinone) activity
LIS83_24790	COG0647	UMP catabolic process
LIS83_24800	COG2445	Protein of unknown function DUF86
LIS83_24805	COG1494	fructose-1,6-bisphosphatase
LIS83_24820	COG4470	Protein conserved in bacteria
LIS83_24830	COG0789	Transcriptional regulator
LIS83_24835	COG4377	Putative membrane peptidase family (DUF2324)
LIS83_24860	COG0739	heme binding
LIS83_24870	COG3377	Domain of unknown function (DUF1805)
LIS83_24875	COG0737	Belongs to the 5'-nucleotidase family
LIS83_24880	COG1695	Transcriptional regulator
LIS83_24890	COG0719	Fe-S assembly protein
LIS83_24895	COG0822	iron-sulfur transferase activity
LIS83_24900	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
LIS83_24905	COG0719	Fe-S assembly protein
LIS83_24910	COG0396	ATPase activity
LIS83_24915	COG1464	Belongs to the NlpA lipoprotein family
LIS83_24920	COG1464	Belongs to the NlpA lipoprotein family
LIS83_24925	COG2011	ABC-type metal ion transport system permease component
LIS83_24940	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LIS83_24945	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
LIS83_24955	COG1393	Belongs to the ArsC family
LIS83_25005	COG0039	L-malate dehydrogenase activity
LIS83_25030	COG1309	transcriptional regulator
LIS83_25035	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LIS83_25045	COG4555	ABC transporter
LIS83_25070	COG1960	acyl-CoA dehydrogenase activity
LIS83_25075	COG0183	Belongs to the thiolase family
LIS83_25080	COG1024	Enoyl-CoA hydratase
LIS83_25080	COG1250	3-hydroxyacyl-CoA dehydrogenase
LIS83_25090	COG1686	Belongs to the peptidase S11 family
LIS83_25105	COG0011	TIGRFAM Protein of
LIS83_25110	COG0840	transmembrane signaling receptor activity
LIS83_25130	COG2814	Major facilitator Superfamily
LIS83_25135	COG0531	amino acid
LIS83_25150	COG0706	membrane insertase activity
LIS83_25160	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LIS83_25195	COG0586	Pfam SNARE associated Golgi protein
LIS83_25205	COG1376	ErfK ybiS ycfS ynhG family protein
LIS83_25210	COG0745	RESPONSE REGULATOR receiver
LIS83_25215	COG5002	protein histidine kinase activity
LIS83_25240	COG0840	transmembrane signaling receptor activity
LIS83_25245	COG2151	metal-sulfur cluster biosynthetic enzyme
LIS83_25250	COG3227	Zinc metalloprotease (Elastase)
LIS83_25255	COG1741	Belongs to the pirin family
LIS83_25270	COG0475	glutathione-regulated potassium exporter activity
LIS83_25275	COG0490	domain, Protein
LIS83_25280	COG1115	amino acid carrier protein
LIS83_25285	COG0783	Belongs to the Dps family
LIS83_25300	COG1611	Belongs to the LOG family
LIS83_25320	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LIS83_25325	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LIS83_25330	COG1115	amino acid carrier protein
LIS83_25335	COG1115	amino acid carrier protein
LIS83_25340	COG2910	NAD(P)H-binding
LIS83_25355	COG0656	L-ascorbic acid biosynthetic process
LIS83_25360	COG2814	Major facilitator Superfamily
LIS83_25365	COG1733	regulation of RNA biosynthetic process
LIS83_25375	COG1252	NADH dehydrogenase
LIS83_25380	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
LIS83_25395	COG0840	transmembrane signaling receptor activity
LIS83_25395	COG3290	protein histidine kinase activity
LIS83_25405	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LIS83_25430	COG0488	(ABC) transporter
LIS83_25435	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LIS83_25490	COG0557	exoribonuclease II activity
LIS83_25495	COG1647	Serine aminopeptidase, S33
LIS83_25500	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
LIS83_25505	COG1346	cytolysis
LIS83_25595	COG4695	Portal protein
LIS83_25615	COG4974	Belongs to the 'phage' integrase family
LIS83_25640	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
LIS83_25655	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
LIS83_25680	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LIS83_25695	COG2323	membrane
LIS83_25705	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
LIS83_25715	COG0391	Required for morphogenesis under gluconeogenic growth conditions
LIS83_25725	COG1051	belongs to the nudix hydrolase family
LIS83_25735	COG0492	ferredoxin-NADP+ reductase activity
LIS83_25740	COG0457	Tetratricopeptide repeat
LIS83_25745	COG0110	maltose O-acetyltransferase activity
LIS83_25765	COG1950	PFAM Membrane protein of
LIS83_25775	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
LIS83_25780	COG0556	nucleotide-excision repair
LIS83_25795	COG0789	Transcriptional regulator
LIS83_25820	COG2855	membrane
LIS83_25825	COG0583	DNA-binding transcription factor activity
LIS83_25835	COG0655	NAD(P)H dehydrogenase (quinone) activity
LIS83_25840	COG0488	(ABC) transporter
LIS83_25850	COG1132	(ABC) transporter
LIS83_25855	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LIS83_25860	COG3409	Peptidoglycan-binding domain 1 protein
LIS83_25860	COG0793	Belongs to the peptidase S41A family
LIS83_25865	COG2177	Part of the ABC transporter FtsEX involved in
LIS83_25870	COG2884	Cell division ATP-binding protein ftsE
LIS83_25890	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
LIS83_25895	COG1278	Cold shock
LIS83_25900	COG1040	competence protein
LIS83_25905	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
LIS83_25910	COG0791	NLP P60 protein
LIS83_25910	COG1388	LysM domain
LIS83_25915	COG1733	regulation of RNA biosynthetic process
LIS83_25920	COG1307	EDD domain protein, DegV family
LIS83_25925	COG1739	Uncharacterized protein family UPF0029
LIS83_25930	COG1316	TRANSCRIPTIONal
LIS83_25935	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
LIS83_25940	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
LIS83_25945	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
LIS83_25955	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
LIS83_25955	COG3933	PFAM sigma-54 factor interaction domain-containing protein
LIS83_25975	COG1486	melibiose metabolic process
LIS83_25980	COG1447	Phosphotransferase system cellobiose-specific component IIA
LIS83_25985	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
LIS83_25995	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
LIS83_26015	COG1447	Phosphotransferase system cellobiose-specific component IIA
LIS83_26025	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
LIS83_26030	COG1301	dicarboxylic acid transport
LIS83_26040	COG0346	lactoylglutathione lyase activity
LIS83_26060	COG1511	domain protein
LIS83_26065	COG0583	DNA-binding transcription factor activity
LIS83_26070	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
LIS83_26080	COG1271	oxidase subunit
LIS83_26085	COG1294	oxidase, subunit
LIS83_26090	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
LIS83_26100	COG1620	l-lactate permease
LIS83_26115	COG2389	metal-binding protein
LIS83_26125	COG1368	sulfuric ester hydrolase activity
LIS83_26135	COG0791	NLP P60 protein
LIS83_26135	COG1388	LysM domain
LIS83_26140	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LIS83_26150	COG1215	transferase activity, transferring glycosyl groups
LIS83_26155	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
LIS83_26160	COG1388	LysM domain
LIS83_26160	COG3584	3D domain protein
LIS83_26185	COG4715	Zinc finger, swim domain protein
LIS83_26190	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
LIS83_26235	COG0577	efflux transmembrane transporter activity
LIS83_26240	COG1136	(ABC) transporter
LIS83_26280	COG0745	RESPONSE REGULATOR receiver
LIS83_26285	COG1482	cell wall glycoprotein biosynthetic process
LIS83_26290	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LIS83_26290	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LIS83_26290	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LIS83_26295	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LIS83_26295	COG3711	transcriptional antiterminator
LIS83_26300	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
LIS83_26315	COG1482	cell wall glycoprotein biosynthetic process
LIS83_26325	COG0662	Cupin 2, conserved barrel domain protein
LIS83_26325	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
LIS83_26330	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
LIS83_26340	COG0438	transferase activity, transferring glycosyl groups
LIS83_26365	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LIS83_26370	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
LIS83_26375	COG1210	Utp--glucose-1-phosphate uridylyltransferase
LIS83_26380	COG4464	protein tyrosine phosphatase activity
LIS83_26385	COG0489	protein tyrosine kinase activity
LIS83_26390	COG3944	biosynthesis protein
LIS83_26395	COG0489	protein tyrosine kinase activity
LIS83_26410	COG1609	Transcriptional regulator
LIS83_26420	COG0739	heme binding
LIS83_26435	COG3279	Response regulator of the LytR AlgR family
LIS83_26440	COG2385	sporulation resulting in formation of a cellular spore
LIS83_26455	COG4836	Membrane
LIS83_26460	COG1007	ATP synthesis coupled electron transport
LIS83_26465	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LIS83_26470	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
LIS83_26480	COG0839	Belongs to the complex I subunit 6 family
LIS83_26495	COG0649	NAD binding
LIS83_26500	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LIS83_26515	COG3300	MHYT domain
LIS83_26515	COG5001	Diguanylate cyclase
LIS83_26565	COG0356	it plays a direct role in the translocation of protons across the membrane
LIS83_26600	COG0698	ribose 5-phosphate isomerase
LIS83_26610	COG2190	(PTS) system
LIS83_26615	COG2259	Doxx family
LIS83_26620	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
LIS83_26640	COG0009	L-threonylcarbamoyladenylate synthase
LIS83_26655	COG2890	protein-(glutamine-N5) methyltransferase activity
LIS83_26675	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
LIS83_26680	COG1494	fructose-1,6-bisphosphatase
LIS83_26700	COG4821	SIS domain
LIS83_26720	COG1960	acyl-CoA dehydrogenase activity
LIS83_26725	COG1960	acyl-CoA dehydrogenase activity
LIS83_26730	COG1250	3-hydroxyacyl-CoA dehydrogenase
LIS83_26735	COG0183	Belongs to the thiolase family
LIS83_26740	COG0247	lactate metabolic process
LIS83_26740	COG2181	nitrate reductase activity
LIS83_26745	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LIS83_26755	COG3300	MHYT domain
LIS83_26755	COG5001	Diguanylate cyclase
LIS83_26775	COG2197	response regulator
LIS83_26780	COG4585	Histidine kinase
LIS83_26785	COG0842	Transport permease protein
LIS83_26790	COG1131	(ABC) transporter
LIS83_26795	COG0024	Methionine aminopeptidase
LIS83_26805	COG2234	aminopeptidase activity
LIS83_26825	COG1595	DNA-templated transcription, initiation
LIS83_26835	COG4506	Protein conserved in bacteria
LIS83_26840	COG1619	proteins homologs of microcin C7 resistance protein MccF
LIS83_26855	COG0010	Belongs to the arginase family
LIS83_26865	COG2814	Major facilitator Superfamily
LIS83_26870	COG0789	Transcriptional regulator
LIS83_26875	COG0584	glycerophosphoryl diester phosphodiesterase
LIS83_26880	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LIS83_26890	COG1994	Peptidase M50
LIS83_26900	COG1078	dGTPase activity
LIS83_26905	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LIS83_26910	COG1120	ATPase activity
LIS83_26915	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LIS83_26920	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LIS83_26940	COG0095	Lipoate-protein ligase
LIS83_26945	COG0280	phosphate acetyltransferase
LIS83_26960	COG3773	Cell wall hydrolase
LIS83_26970	COG2363	Small membrane protein
LIS83_26980	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
LIS83_26985	COG2233	PERMEase
LIS83_26990	COG0561	phosphatase activity
LIS83_26995	COG2814	Major facilitator Superfamily
LIS83_27005	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
LIS83_27010	COG1131	(ABC) transporter
LIS83_27015	COG2755	lipolytic protein G-D-S-L family
LIS83_27020	COG1609	Transcriptional regulator
LIS83_27030	COG0460	homoserine dehydrogenase
LIS83_27040	COG2873	o-acetylhomoserine
LIS83_27045	COG1011	Hydrolase
LIS83_27060	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
LIS83_27070	COG2197	response regulator
LIS83_27075	COG2203	Gaf domain
LIS83_27075	COG4585	Histidine kinase
LIS83_27080	COG0351	phosphomethylpyrimidine kinase
LIS83_27085	COG3706	GGDEF domain
LIS83_27090	COG2879	small protein
LIS83_27095	COG1966	Carbon starvation protein
LIS83_27100	COG3279	Response regulator of the LytR AlgR family
LIS83_27105	COG0477	Major facilitator Superfamily
LIS83_27130	COG0840	transmembrane signaling receptor activity
LIS83_27140	COG1607	acyl-coa hydrolase
LIS83_27155	COG0488	(ABC) transporter
LIS83_27175	COG0463	Glycosyl transferase, family 2
LIS83_27180	COG1309	transcriptional regulator
LIS83_27185	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LIS83_27190	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LIS83_27190	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LIS83_27195	COG0628	permease
LIS83_27210	COG3279	Response regulator of the LytR AlgR family
LIS83_27215	COG3275	phosphorelay sensor kinase activity
LIS83_27220	COG2814	Major facilitator Superfamily
LIS83_27225	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
LIS83_27230	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
LIS83_27235	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
LIS83_27255	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
LIS83_27260	COG1272	protein, Hemolysin III
LIS83_27285	COG1164	Oligoendopeptidase f
LIS83_27305	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LIS83_27310	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
LIS83_27315	COG4853	Protein conserved in bacteria
LIS83_27320	COG4863	YycH protein
LIS83_27325	COG5002	protein histidine kinase activity
LIS83_27330	COG0745	RESPONSE REGULATOR receiver
LIS83_27360	COG0305	Participates in initiation and elongation during chromosome replication
LIS83_27370	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
LIS83_27375	COG4241	membrane
LIS83_27385	COG0629	single-stranded DNA binding
LIS83_27395	COG0012	GTP binding
LIS83_27400	COG4481	Protein conserved in bacteria
LIS83_27405	COG0668	transmembrane transport
LIS83_27415	COG1475	DNA binding
LIS83_27420	COG1192	Involved in chromosome partitioning
LIS83_27445	COG1847	R3H domain protein
LIS83_27450	COG0706	membrane insertase activity
LIS83_27460	COG0230	Belongs to the bacterial ribosomal protein bL34 family
LIS83_27485	COG2002	toxin-antitoxin pair type II binding
LIS83_27495	COG4974	Belongs to the 'phage' integrase family
LIS83_27590	COG3708	Transcriptional regulator
LIS83_27590	COG2207	Transcriptional regulator
LIS83_27620	COG1335	isochorismatase
LIS83_27625	COG4990	cell redox homeostasis
LIS83_27630	COG0745	RESPONSE REGULATOR receiver
LIS83_27665	COG4974	Belongs to the 'phage' integrase family
LIS83_27675	COG0457	Tetratricopeptide repeat
LIS83_27705	COG1181	Belongs to the D-alanine--D-alanine ligase family
LIS83_27705	COG2918	glutathione biosynthetic process
LIS83_27715	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
LIS83_27725	COG1733	regulation of RNA biosynthetic process
LIS83_27730	COG0604	alcohol dehydrogenase
LIS83_27810	COG1476	TRANSCRIPTIONal
LIS83_27820	COG3013	Belongs to the UPF0304 family
LIS83_27840	COG3344	reverse transcriptase
LIS83_27860	COG1733	regulation of RNA biosynthetic process
LIS83_27885	COG0697	spore germination
LIS83_27955	COG3344	reverse transcriptase
LIS83_28020	COG1396	sequence-specific DNA binding
LIS83_28040	COG3397	chitin binding
LIS83_28080	COG3103	Sh3 type 3 domain protein
LIS83_28080	COG1388	LysM domain
LIS83_28080	COG0791	NLP P60 protein
LIS83_28125	COG0640	Transcriptional regulator
LIS83_28365	COG0071	Belongs to the small heat shock protein (HSP20) family
LIS83_28380	COG3344	reverse transcriptase
LIS83_28495	COG4962	Type ii secretion system protein e
LIS83_28645	COG2732	(Barnase) inhibitor
LIS83_28710	COG3344	reverse transcriptase
LIS83_28760	COG2311	Membrane
LIS83_28775	COG5484	DNA packaging
LIS83_28775	COG3728	DNA packaging
LIS83_28940	COG1192	Involved in chromosome partitioning
LIS83_28975	COG3620	sequence-specific DNA binding
LIS83_28995	COG1396	sequence-specific DNA binding
LIS83_29025	COG5377	YqaJ viral recombinase family
LIS83_29030	COG3723	Recombinational DNA repair protein, rece pathway
LIS83_29050	COG0305	Participates in initiation and elongation during chromosome replication
LIS83_29170	COG0322	excinuclease ABC activity
LIS83_29285	COG1396	sequence-specific DNA binding
LIS83_29305	COG2002	toxin-antitoxin pair type II binding
LIS83_29420	COG4974	Belongs to the 'phage' integrase family
LIS83_29440	COG5518	Phage portal protein
LIS83_29445	COG2369	cell adhesion
LIS83_29450	COG0338	D12 class N6 adenine-specific DNA methyltransferase
LIS83_29455	COG4653	Phage capsid family