locus-tag	class	description
OM983_00065	COG4970	Tfp pilus assembly protein FimT
OM983_00075	COG1459	type II secretion system
OM983_00080	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
OM983_00130	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
OM983_00135	COG0646	methionine synthase
OM983_00135	COG1410	methionine synthase
OM983_00140	COG0646	methionine synthase
OM983_00140	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
OM983_00145	COG0626	cystathionine gamma-synthase activity
OM983_00150	COG0626	cystathionine gamma-synthase activity
OM983_00170	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OM983_00180	COG1940	carbohydrate kinase activity
OM983_00185	COG4483	Protein conserved in bacteria
OM983_00190	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
OM983_00195	COG0267	Belongs to the bacterial ribosomal protein bL33 family
OM983_00205	COG0704	Plays a role in the regulation of phosphate uptake
OM983_00215	COG0581	inorganic phosphate transmembrane transporter activity
OM983_00220	COG0573	inorganic phosphate transmembrane transporter activity
OM983_00225	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
OM983_00230	COG0768	penicillin binding
OM983_00235	COG0477	Major facilitator Superfamily
OM983_00240	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
OM983_00265	COG0735	belongs to the Fur family
OM983_00270	COG1108	ABC-type Mn2 Zn2 transport systems permease components
OM983_00275	COG1121	(ABC) transporter
OM983_00280	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
OM983_00310	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
OM983_00315	COG2384	SAM-dependent methyltransferase
OM983_00320	COG2010	Cytochrome c
OM983_00325	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
OM983_00330	COG0358	DNA primase activity
OM983_00340	COG0517	IMP dehydrogenase activity
OM983_00355	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
OM983_00360	COG0295	cytidine deaminase activity
OM983_00365	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
OM983_00375	COG1480	7TM receptor with intracellular HD hydrolase
OM983_00380	COG1702	phosphate starvation-inducible protein PhoH
OM983_00395	COG1610	YqeY-like protein
OM983_00400	COG0828	Belongs to the bacterial ribosomal protein bS21 family
OM983_00405	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
OM983_00410	COG1385	rRNA (uridine-N3-)-methyltransferase activity
OM983_00440	COG0635	Involved in the biosynthesis of porphyrin-containing compound
OM983_00445	COG1733	regulation of RNA biosynthetic process
OM983_00470	COG1466	dna polymerase III delta subunit
OM983_00480	COG0658	competence protein
OM983_00480	COG2333	competence protein COMEC
OM983_00485	COG2131	deaminase
OM983_00490	COG1555	photosystem II stabilization
OM983_00490	COG1596	polysaccharide export
OM983_00495	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
OM983_00500	COG2226	methyltransferase
OM983_00505	COG0799	negative regulation of ribosome biogenesis
OM983_00510	COG1713	HD superfamily hydrolase involved in NAD metabolism
OM983_00520	COG1534	Rna-binding protein
OM983_00530	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
OM983_00535	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
OM983_00560	COG1595	DNA-templated transcription, initiation
OM983_00570	COG0778	Nitroreductase
OM983_00575	COG2357	RelA SpoT domain protein
OM983_00585	COG1785	Belongs to the alkaline phosphatase family
OM983_00595	COG2267	carboxylic ester hydrolase activity
OM983_00630	COG1404	Belongs to the peptidase S8 family
OM983_00635	COG3186	Phenylalanine-4-hydroxylase
OM983_00650	COG2259	Doxx family
OM983_00690	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
OM983_00700	COG1012	belongs to the aldehyde dehydrogenase family
OM983_00700	COG1454	alcohol dehydrogenase
OM983_00705	COG0626	cystathionine gamma-synthase activity
OM983_00710	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
OM983_00735	COG0768	penicillin binding
OM983_00750	COG0826	peptidase U32
OM983_00755	COG0826	peptidase U32
OM983_00760	COG4122	O-methyltransferase activity
OM983_00765	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
OM983_00785	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
OM983_00795	COG0628	permease
OM983_00815	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
OM983_00825	COG0482	sulfurtransferase activity
OM983_00830	COG1104	cysteine desulfurase activity
OM983_00835	COG1959	2 iron, 2 sulfur cluster binding
OM983_00840	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
OM983_00850	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
OM983_00875	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
OM983_00885	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
OM983_00885	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
OM983_00890	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
OM983_00895	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
OM983_00895	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
OM983_00905	COG2244	polysaccharide biosynthetic process
OM983_00910	COG2323	membrane
OM983_00920	COG1862	Preprotein translocase
OM983_00950	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
OM983_00960	COG0697	spore germination
OM983_00965	COG0697	spore germination
OM983_00970	COG0640	Transcriptional regulator
OM983_00995	COG0157	Belongs to the NadC ModD family
OM983_01000	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
OM983_01005	COG1104	cysteine desulfurase activity
OM983_01010	COG1827	regulation of RNA biosynthetic process
OM983_01015	COG2258	MOSC domain
OM983_01020	COG0077	Prephenate dehydratase
OM983_01025	COG0577	efflux transmembrane transporter activity
OM983_01030	COG0577	efflux transmembrane transporter activity
OM983_01035	COG1136	(ABC) transporter
OM983_01045	COG0745	RESPONSE REGULATOR receiver
OM983_01050	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
OM983_01060	COG2868	ribosomal protein
OM983_01070	COG1530	ribonuclease E activity
OM983_01075	COG1994	Peptidase M50
OM983_01080	COG0739	heme binding
OM983_01085	COG2894	cell division
OM983_01105	COG1077	Cell shape determining protein MreB Mrl
OM983_01125	COG0285	dihydrofolate synthase activity
OM983_01130	COG0525	valine-tRNA ligase activity
OM983_01140	COG1388	LysM domain
OM983_01150	COG0113	porphobilinogen synthase activity
OM983_01155	COG1587	Uroporphyrinogen-III synthase
OM983_01165	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
OM983_01175	COG1846	Transcriptional regulator
OM983_01180	COG1764	response to oxidative stress
OM983_01195	COG1067	ATP-dependent peptidase activity
OM983_01195	COG0470	DNA polymerase III
OM983_01240	COG0622	Phosphoesterase
OM983_01255	COG5401	PFAM Sporulation and spore germination
OM983_01275	COG1309	transcriptional regulator
OM983_01290	COG2197	response regulator
OM983_01295	COG2233	PERMEase
OM983_01305	COG0402	S-adenosylhomocysteine deaminase activity
OM983_01310	COG0402	S-adenosylhomocysteine deaminase activity
OM983_01320	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
OM983_01330	COG0444	Belongs to the ABC transporter superfamily
OM983_01335	COG4608	Belongs to the ABC transporter superfamily
OM983_01340	COG3275	phosphorelay sensor kinase activity
OM983_01345	COG3279	Response regulator of the LytR AlgR family
OM983_01360	COG1983	PspC domain protein
OM983_01365	COG1396	sequence-specific DNA binding
OM983_01370	COG0697	spore germination
OM983_01380	COG1959	2 iron, 2 sulfur cluster binding
OM983_01385	COG1668	transmembrane transport
OM983_01390	COG4152	abc transporter atp-binding protein
OM983_01395	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
OM983_01405	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
OM983_01410	COG1876	peptidase activity
OM983_01415	COG0824	Thioesterase
OM983_01420	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
OM983_01425	COG1053	succinate dehydrogenase
OM983_01430	COG2009	succinate dehydrogenase
OM983_01435	COG1719	4-vinyl reductase, 4VR
OM983_01445	COG3118	belongs to the thioredoxin family
OM983_01450	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
OM983_01455	COG2086	electron transfer activity
OM983_01460	COG1024	Enoyl-CoA hydratase
OM983_01470	COG0318	PFAM AMP-dependent synthetase and ligase
OM983_01490	COG2318	DinB family
OM983_01520	COG1131	(ABC) transporter
OM983_01525	COG2205	protein histidine kinase activity
OM983_01530	COG0745	RESPONSE REGULATOR receiver
OM983_01540	COG4895	conserved protein (DUF2196)
OM983_01545	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
OM983_01560	COG4509	Sortase family
OM983_01565	COG1120	ATPase activity
OM983_01580	COG5386	Cell surface protein
OM983_01590	COG5386	Cell surface protein
OM983_01595	COG1114	Component of the transport system for branched-chain amino acids
OM983_01600	COG1187	pseudouridine synthase activity
OM983_01610	COG1796	DNA polymerase
OM983_01610	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
OM983_01615	COG1286	toxin biosynthetic process
OM983_01660	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
OM983_01670	COG1418	mRNA catabolic process
OM983_01695	COG2814	Major facilitator Superfamily
OM983_01700	COG1566	PFAM secretion protein HlyD family protein
OM983_01705	COG1309	transcriptional regulator
OM983_01710	COG1363	Peptidase, m42
OM983_01735	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
OM983_01745	COG1484	DNA-dependent DNA replication
OM983_01750	COG3611	Membrane attachment protein
OM983_01760	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
OM983_01765	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
OM983_01770	COG0237	dephospho-CoA kinase activity
OM983_01775	COG1971	Probably functions as a manganese efflux pump
OM983_01785	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
OM983_01785	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
OM983_01790	COG5002	protein histidine kinase activity
OM983_01795	COG0745	RESPONSE REGULATOR receiver
OM983_01820	COG0538	isocitrate dehydrogenase activity
OM983_01825	COG0372	Belongs to the citrate synthase family
OM983_01835	COG0628	permease
OM983_01840	COG3030	protein affecting phage T7 exclusion by the F plasmid
OM983_01865	COG1725	Transcriptional regulator
OM983_01870	COG0281	malic enzyme
OM983_01875	COG0587	DNA-directed DNA polymerase activity
OM983_01890	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
OM983_01910	COG4109	DRTGG domain
OM983_01925	COG0006	proline dipeptidase activity
OM983_01965	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
OM983_01970	COG0662	Cupin 2, conserved barrel domain protein
OM983_01980	COG1476	TRANSCRIPTIONal
OM983_01995	COG1028	Short-chain dehydrogenase reductase Sdr
OM983_02000	COG0589	response to stress
OM983_02040	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
OM983_02060	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
OM983_02065	COG0827	DNA restriction-modification system
OM983_02070	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
OM983_02075	COG3874	Sporulation protein YtfJ
OM983_02090	COG1574	metal-dependent hydrolase with the TIM-barrel fold
OM983_02100	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
OM983_02115	COG1104	cysteine desulfurase activity
OM983_02125	COG0583	DNA-binding transcription factor activity
OM983_02130	COG0697	spore germination
OM983_02140	COG1956	GAF domain-containing protein
OM983_02145	COG0626	cystathionine gamma-synthase activity
OM983_02175	COG1595	DNA-templated transcription, initiation
OM983_02185	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
OM983_02190	COG0454	-acetyltransferase
OM983_02195	COG0517	IMP dehydrogenase activity
OM983_02200	COG0123	including yeast histone deacetylase and acetoin utilization protein
OM983_02210	COG0745	RESPONSE REGULATOR receiver
OM983_02220	COG0666	response to abiotic stimulus
OM983_02255	COG1609	Transcriptional regulator
OM983_02260	COG4851	CamS sex pheromone cAM373 precursor
OM983_02265	COG3118	belongs to the thioredoxin family
OM983_02275	COG2309	aminopeptidase activity
OM983_02295	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
OM983_02310	COG1674	ftsk spoiiie
OM983_02320	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
OM983_02325	COG4848	Belongs to the UPF0354 family
OM983_02330	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
OM983_02335	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
OM983_02340	COG1363	Peptidase, m42
OM983_02350	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OM983_02365	COG0510	thiamine kinase activity
OM983_02370	COG1523	belongs to the glycosyl hydrolase 13 family
OM983_02385	COG1349	DNA-binding transcription factor activity
OM983_02390	COG1187	pseudouridine synthase activity
OM983_02395	COG2244	polysaccharide biosynthetic process
OM983_02400	COG2081	HI0933 family
OM983_02405	COG2814	Major facilitator Superfamily
OM983_02415	COG3832	glyoxalase III activity
OM983_02435	COG1329	Transcriptional regulator
OM983_02445	COG4975	Glucose uptake
OM983_02460	COG0314	molybdopterin synthase activity
OM983_02465	COG1763	Mo-molybdopterin cofactor biosynthetic process
OM983_02470	COG0303	'Molybdopterin
OM983_02480	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
OM983_02505	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
OM983_02515	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
OM983_02555	COG2814	Major facilitator Superfamily
OM983_02560	COG0475	glutathione-regulated potassium exporter activity
OM983_02565	COG0490	domain, Protein
OM983_02570	COG0582	viral genome integration into host DNA
OM983_02580	COG1136	(ABC) transporter
OM983_02600	COG1242	4 iron, 4 sulfur cluster binding
OM983_02605	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
OM983_02610	COG1131	(ABC) transporter
OM983_02620	COG1794	racemase activity, acting on amino acids and derivatives
OM983_02640	COG2267	carboxylic ester hydrolase activity
OM983_02645	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
OM983_02650	COG0671	phosphoesterase, PA-phosphatase related
OM983_02655	COG0438	transferase activity, transferring glycosyl groups
OM983_02665	COG0521	Mo-molybdopterin cofactor biosynthetic process
OM983_02720	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
OM983_02725	COG5002	protein histidine kinase activity
OM983_02730	COG4191	Histidine kinase
OM983_02735	COG2267	carboxylic ester hydrolase activity
OM983_02755	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
OM983_02760	COG1116	anion transmembrane transporter activity
OM983_02765	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
OM983_02790	COG0494	nUDIX hydrolase
OM983_02825	COG0288	reversible hydration of carbon dioxide
OM983_02830	COG1271	oxidase subunit
OM983_02835	COG1294	oxidase, subunit
OM983_02855	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
OM983_02880	COG1842	Phage shock protein A
OM983_02910	COG5002	protein histidine kinase activity
OM983_02915	COG0745	RESPONSE REGULATOR receiver
OM983_02945	COG1597	lipid kinase activity
OM983_02980	COG0586	Pfam SNARE associated Golgi protein
OM983_02990	COG0577	efflux transmembrane transporter activity
OM983_02995	COG1136	(ABC) transporter
OM983_03000	COG3708	Transcriptional regulator
OM983_03000	COG2207	Transcriptional regulator
OM983_03005	COG0745	RESPONSE REGULATOR receiver
OM983_03010	COG2205	protein histidine kinase activity
OM983_03020	COG0577	efflux transmembrane transporter activity
OM983_03025	COG1136	(ABC) transporter
OM983_03045	COG2188	Transcriptional regulator
OM983_03065	COG3964	amidohydrolase
OM983_03095	COG4948	Mandelate Racemase Muconate Lactonizing
OM983_03105	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
OM983_03110	COG0596	Alpha beta hydrolase
OM983_03115	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
OM983_03120	COG1169	isochorismate synthase
OM983_03125	COG1575	Belongs to the MenA family. Type 1 subfamily
OM983_03130	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
OM983_03155	COG0058	SHG alpha-glucan phosphorylase activity
OM983_03160	COG0297	glycogen (starch) synthase activity
OM983_03165	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
OM983_03280	COG0544	peptidyl-prolyl cis-trans isomerase activity
OM983_03315	COG1285	pathogenesis
OM983_03320	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
OM983_03330	COG0166	Belongs to the GPI family
OM983_03335	COG2155	Conserved Protein
OM983_03340	COG1098	S1 RNA binding domain
OM983_03345	COG0436	Aminotransferase
OM983_03350	COG1522	sequence-specific DNA binding
OM983_03355	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
OM983_03360	COG2267	carboxylic ester hydrolase activity
OM983_03370	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
OM983_03390	COG5018	Exonuclease
OM983_03395	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
OM983_03415	COG2050	protein possibly involved in aromatic compounds catabolism
OM983_03425	COG1268	BioY protein
OM983_03435	COG1210	Utp--glucose-1-phosphate uridylyltransferase
OM983_03440	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
OM983_03455	COG3584	3D domain protein
OM983_03470	COG1252	NADH dehydrogenase
OM983_03485	COG3708	Transcriptional regulator
OM983_03500	COG1683	Conserved Protein
OM983_03520	COG0316	Belongs to the HesB IscA family
OM983_03535	COG1252	NADH dehydrogenase
OM983_03550	COG0390	transport system, permease component
OM983_03555	COG2824	Alkylphosphonate utilization operon protein PhnA
OM983_03595	COG4837	Protein of unknown function (DUF1462)
OM983_03600	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
OM983_03610	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
OM983_03615	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
OM983_03625	COG2249	NAD(P)H dehydrogenase (quinone) activity
OM983_03630	COG0647	UMP catabolic process
OM983_03640	COG2445	Protein of unknown function DUF86
OM983_03645	COG1494	fructose-1,6-bisphosphatase
OM983_03660	COG4470	Protein conserved in bacteria
OM983_03670	COG0789	Transcriptional regulator
OM983_03675	COG4377	Putative membrane peptidase family (DUF2324)
OM983_03700	COG0739	heme binding
OM983_03710	COG3377	Domain of unknown function (DUF1805)
OM983_03715	COG0737	Belongs to the 5'-nucleotidase family
OM983_03720	COG1695	Transcriptional regulator
OM983_03730	COG0719	Fe-S assembly protein
OM983_03735	COG0822	iron-sulfur transferase activity
OM983_03740	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
OM983_03745	COG0719	Fe-S assembly protein
OM983_03750	COG0396	ATPase activity
OM983_03755	COG1464	Belongs to the NlpA lipoprotein family
OM983_03760	COG1464	Belongs to the NlpA lipoprotein family
OM983_03765	COG2011	ABC-type metal ion transport system permease component
OM983_03770	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
OM983_03780	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
OM983_03785	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
OM983_03795	COG1393	Belongs to the ArsC family
OM983_03840	COG0039	L-malate dehydrogenase activity
OM983_03865	COG1309	transcriptional regulator
OM983_03870	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OM983_03875	COG1960	acyl-CoA dehydrogenase activity
OM983_03880	COG0183	Belongs to the thiolase family
OM983_03885	COG1024	Enoyl-CoA hydratase
OM983_03885	COG1250	3-hydroxyacyl-CoA dehydrogenase
OM983_03895	COG1686	Belongs to the peptidase S11 family
OM983_03910	COG0011	TIGRFAM Protein of
OM983_03915	COG0840	transmembrane signaling receptor activity
OM983_03935	COG2814	Major facilitator Superfamily
OM983_03940	COG0531	amino acid
OM983_03950	COG0706	membrane insertase activity
OM983_03960	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
OM983_03995	COG0586	Pfam SNARE associated Golgi protein
OM983_04005	COG1376	ErfK ybiS ycfS ynhG family protein
OM983_04010	COG0745	RESPONSE REGULATOR receiver
OM983_04015	COG5002	protein histidine kinase activity
OM983_04040	COG2151	metal-sulfur cluster biosynthetic enzyme
OM983_04045	COG3227	Zinc metalloprotease (Elastase)
OM983_04050	COG1741	Belongs to the pirin family
OM983_04065	COG0475	glutathione-regulated potassium exporter activity
OM983_04070	COG0490	domain, Protein
OM983_04075	COG1115	amino acid carrier protein
OM983_04080	COG0783	Belongs to the Dps family
OM983_04095	COG1611	Belongs to the LOG family
OM983_04115	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
OM983_04120	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
OM983_04125	COG1115	amino acid carrier protein
OM983_04130	COG1115	amino acid carrier protein
OM983_04135	COG2910	NAD(P)H-binding
OM983_04150	COG0656	L-ascorbic acid biosynthetic process
OM983_04155	COG2814	Major facilitator Superfamily
OM983_04160	COG1733	regulation of RNA biosynthetic process
OM983_04170	COG1252	NADH dehydrogenase
OM983_04175	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
OM983_04180	COG0812	UDP-N-acetylmuramate dehydrogenase activity
OM983_04190	COG0840	transmembrane signaling receptor activity
OM983_04190	COG3290	protein histidine kinase activity
OM983_04200	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
OM983_04205	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
OM983_04220	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
OM983_04275	COG0557	exoribonuclease II activity
OM983_04280	COG1647	Serine aminopeptidase, S33
OM983_04285	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
OM983_04290	COG1346	cytolysis
OM983_04385	COG4695	Portal protein
OM983_04410	COG4974	Belongs to the 'phage' integrase family
OM983_04420	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
OM983_04425	COG0149	triose-phosphate isomerase activity
OM983_04435	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
OM983_04450	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
OM983_04475	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
OM983_04490	COG2323	membrane
OM983_04495	COG0740	serine-type endopeptidase activity
OM983_04500	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
OM983_04510	COG0391	Required for morphogenesis under gluconeogenic growth conditions
OM983_04520	COG1051	belongs to the nudix hydrolase family
OM983_04530	COG0492	ferredoxin-NADP+ reductase activity
OM983_04535	COG0457	Tetratricopeptide repeat
OM983_04540	COG0110	maltose O-acetyltransferase activity
OM983_04560	COG1950	PFAM Membrane protein of
OM983_04570	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
OM983_04575	COG0556	nucleotide-excision repair
OM983_04595	COG0789	Transcriptional regulator
OM983_04620	COG2855	membrane
OM983_04625	COG0583	DNA-binding transcription factor activity
OM983_04635	COG0655	NAD(P)H dehydrogenase (quinone) activity
OM983_04640	COG0488	(ABC) transporter
OM983_04650	COG1132	(ABC) transporter
OM983_04655	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
OM983_04660	COG0793	Belongs to the peptidase S41A family
OM983_04660	COG3409	Peptidoglycan-binding domain 1 protein
OM983_04665	COG2177	Part of the ABC transporter FtsEX involved in
OM983_04670	COG2884	Cell division ATP-binding protein ftsE
OM983_04685	COG0653	protein targeting
OM983_04690	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
OM983_04695	COG1278	Cold shock
OM983_04700	COG1040	competence protein
OM983_04705	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
OM983_04710	COG0791	NLP P60 protein
OM983_04710	COG1388	LysM domain
OM983_04715	COG1733	regulation of RNA biosynthetic process
OM983_04720	COG1307	EDD domain protein, DegV family
OM983_04725	COG1739	Uncharacterized protein family UPF0029
OM983_04730	COG1316	TRANSCRIPTIONal
OM983_04735	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
OM983_04740	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
OM983_04745	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
OM983_04755	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
OM983_04755	COG3933	PFAM sigma-54 factor interaction domain-containing protein
OM983_04770	COG3394	polysaccharide catabolic process
OM983_04775	COG1486	melibiose metabolic process
OM983_04780	COG1447	Phosphotransferase system cellobiose-specific component IIA
OM983_04785	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
OM983_04795	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
OM983_04800	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
OM983_04805	COG1447	Phosphotransferase system cellobiose-specific component IIA
OM983_04815	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
OM983_04820	COG1301	dicarboxylic acid transport
OM983_04830	COG0346	lactoylglutathione lyase activity
OM983_04835	COG1511	domain protein
OM983_04840	COG0583	DNA-binding transcription factor activity
OM983_04845	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
OM983_04860	COG1271	oxidase subunit
OM983_04865	COG1294	oxidase, subunit
OM983_04870	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
OM983_04880	COG1620	l-lactate permease
OM983_04890	COG2389	metal-binding protein
OM983_04900	COG1368	sulfuric ester hydrolase activity
OM983_04915	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
OM983_04935	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
OM983_04940	COG1388	LysM domain
OM983_04940	COG3584	3D domain protein
OM983_04965	COG4715	Zinc finger, swim domain protein
OM983_04970	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
OM983_05010	COG0577	efflux transmembrane transporter activity
OM983_05015	COG1136	(ABC) transporter
OM983_05050	COG5002	protein histidine kinase activity
OM983_05055	COG0745	RESPONSE REGULATOR receiver
OM983_05060	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
OM983_05080	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
OM983_05085	COG1134	teichoic acid transport
OM983_05090	COG1682	transport, permease protein
OM983_05095	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
OM983_05140	COG1609	Transcriptional regulator
OM983_05155	COG0739	heme binding
OM983_05175	COG2385	sporulation resulting in formation of a cellular spore
OM983_05190	COG4836	Membrane
OM983_05195	COG1007	ATP synthesis coupled electron transport
OM983_05200	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
OM983_05205	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
OM983_05215	COG0839	Belongs to the complex I subunit 6 family
OM983_05230	COG0649	NAD binding
OM983_05235	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
OM983_05250	COG5001	Diguanylate cyclase
OM983_05250	COG3300	MHYT domain
OM983_05300	COG0356	it plays a direct role in the translocation of protons across the membrane
OM983_05335	COG0698	ribose 5-phosphate isomerase
OM983_05345	COG2190	(PTS) system
OM983_05350	COG2259	Doxx family
OM983_05355	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
OM983_05370	COG0009	L-threonylcarbamoyladenylate synthase
OM983_05385	COG2890	protein-(glutamine-N5) methyltransferase activity
OM983_05405	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
OM983_05410	COG1494	fructose-1,6-bisphosphatase
OM983_05430	COG4821	SIS domain
OM983_05440	COG3343	RNA polymerase activity
OM983_05450	COG1960	acyl-CoA dehydrogenase activity
OM983_05455	COG1960	acyl-CoA dehydrogenase activity
OM983_05460	COG1250	3-hydroxyacyl-CoA dehydrogenase
OM983_05465	COG0183	Belongs to the thiolase family
OM983_05470	COG0247	lactate metabolic process
OM983_05470	COG2181	nitrate reductase activity
OM983_05475	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
OM983_05485	COG3300	MHYT domain
OM983_05485	COG5001	Diguanylate cyclase
OM983_05505	COG2197	response regulator
OM983_05510	COG4585	Histidine kinase
OM983_05515	COG0842	Transport permease protein
OM983_05520	COG1131	(ABC) transporter
OM983_05525	COG0024	Methionine aminopeptidase
OM983_05535	COG2234	aminopeptidase activity
OM983_05555	COG1595	DNA-templated transcription, initiation
OM983_05560	COG0018	arginyl-trna synthetase
OM983_05565	COG4506	Protein conserved in bacteria
OM983_05570	COG1619	proteins homologs of microcin C7 resistance protein MccF
OM983_05585	COG0010	Belongs to the arginase family
OM983_05595	COG2814	Major facilitator Superfamily
OM983_05600	COG0789	Transcriptional regulator
OM983_05605	COG0584	glycerophosphoryl diester phosphodiesterase
OM983_05610	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
OM983_05620	COG1994	Peptidase M50
OM983_05630	COG1078	dGTPase activity
OM983_05635	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
OM983_05640	COG1120	ATPase activity
OM983_05645	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OM983_05670	COG0095	Lipoate-protein ligase
OM983_05675	COG0280	phosphate acetyltransferase
OM983_05690	COG3773	Cell wall hydrolase
OM983_05700	COG2363	Small membrane protein
OM983_05715	COG2233	PERMEase
OM983_05720	COG0561	phosphatase activity
OM983_05725	COG2814	Major facilitator Superfamily
OM983_05735	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
OM983_05740	COG1131	(ABC) transporter
OM983_05745	COG2755	lipolytic protein G-D-S-L family
OM983_05750	COG1609	Transcriptional regulator
OM983_05760	COG0460	homoserine dehydrogenase
OM983_05770	COG2873	o-acetylhomoserine
OM983_05780	COG1011	Hydrolase
OM983_05785	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
OM983_05795	COG2197	response regulator
OM983_05805	COG0351	phosphomethylpyrimidine kinase
OM983_05810	COG3706	GGDEF domain
OM983_05815	COG2879	small protein
OM983_05820	COG1966	Carbon starvation protein
OM983_05825	COG3279	Response regulator of the LytR AlgR family
OM983_05830	COG0477	Major facilitator Superfamily
OM983_05855	COG0840	transmembrane signaling receptor activity
OM983_05865	COG1607	acyl-coa hydrolase
OM983_05880	COG0488	(ABC) transporter
OM983_05900	COG0463	Glycosyl transferase, family 2
OM983_05905	COG1309	transcriptional regulator
OM983_05910	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
OM983_05915	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
OM983_05915	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
OM983_05920	COG0628	permease
OM983_05935	COG3279	Response regulator of the LytR AlgR family
OM983_05940	COG3275	phosphorelay sensor kinase activity
OM983_05945	COG2814	Major facilitator Superfamily
OM983_05950	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
OM983_05955	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
OM983_05960	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
OM983_05980	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
OM983_05985	COG1272	protein, Hemolysin III
OM983_06005	COG0516	GMP reductase activity
OM983_06010	COG1164	Oligoendopeptidase f
OM983_06030	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
OM983_06035	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
OM983_06040	COG4853	Protein conserved in bacteria
OM983_06045	COG4863	YycH protein
OM983_06050	COG5002	protein histidine kinase activity
OM983_06055	COG0745	RESPONSE REGULATOR receiver
OM983_06085	COG0305	Participates in initiation and elongation during chromosome replication
OM983_06095	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
OM983_06100	COG4241	membrane
OM983_06110	COG0629	single-stranded DNA binding
OM983_06120	COG0012	GTP binding
OM983_06125	COG4481	Protein conserved in bacteria
OM983_06130	COG0668	transmembrane transport
OM983_06140	COG1475	DNA binding
OM983_06145	COG1192	Involved in chromosome partitioning
OM983_06170	COG1847	R3H domain protein
OM983_06175	COG0706	membrane insertase activity
OM983_06185	COG0230	Belongs to the bacterial ribosomal protein bL34 family
OM983_06195	COG0592	DNA-directed DNA polymerase activity
OM983_06200	COG2501	S4 domain
OM983_06210	COG0187	DNA topoisomerase II activity
OM983_06215	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
OM983_06250	COG0516	GMP reductase activity
OM983_06250	COG0517	IMP dehydrogenase activity
OM983_06255	COG1686	Belongs to the peptidase S11 family
OM983_06285	COG1428	Deoxynucleoside kinase
OM983_06290	COG1428	Deoxynucleoside kinase
OM983_06295	COG1335	isochorismatase
OM983_06300	COG0590	tRNA wobble adenosine to inosine editing
OM983_06310	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
OM983_06365	COG1982	Orn Lys Arg decarboxylase major
OM983_06375	COG0470	DNA polymerase III
OM983_06380	COG1774	PSP1 C-terminal conserved region
OM983_06390	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
OM983_06400	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
OM983_06405	COG2002	toxin-antitoxin pair type II binding
OM983_06410	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
OM983_06410	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
OM983_06415	COG0084	hydrolase, TatD family'
OM983_06420	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
OM983_06435	COG4466	Protein conserved in bacteria
OM983_06450	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
OM983_06455	COG0251	oxidation-reduction process
OM983_06485	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
OM983_06490	COG2002	toxin-antitoxin pair type II binding
OM983_06495	COG2244	polysaccharide biosynthetic process
OM983_06500	COG3956	TIGRFAM MazG family protein
OM983_06505	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
OM983_06525	COG1098	S1 RNA binding domain
OM983_06540	COG2208	phosphoserine phosphatase activity
OM983_06545	COG0037	tRNA processing
OM983_06550	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
OM983_06555	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
OM983_06570	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
OM983_06575	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
OM983_06580	COG0512	Glutamine amidotransferase of anthranilate synthase
OM983_06585	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
OM983_06590	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
OM983_06595	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
OM983_06600	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
OM983_06605	COG1396	sequence-specific DNA binding
OM983_06610	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
OM983_06640	COG3880	PFAM UvrB UvrC protein
OM983_06650	COG0542	response to heat
OM983_06655	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
OM983_06665	COG4956	integral membrane protein (PIN domain superfamily)
OM983_06685	COG1045	serine acetyltransferase
OM983_06700	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
OM983_06705	COG3688	RNA-binding protein containing a PIN domain
OM983_06720	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
OM983_06725	COG0250	Participates in transcription elongation, termination and antitermination
OM983_06730	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
OM983_06750	COG2813	Specifically methylates the guanine in position
OM983_06760	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
OM983_06765	COG1358	cellular component organization or biogenesis
OM983_06835	COG0255	Belongs to the universal ribosomal protein uL29 family
OM983_06895	COG0201	protein transport
OM983_06905	COG0024	Methionine aminopeptidase
OM983_06915	COG0257	Belongs to the bacterial ribosomal protein bL36 family
OM983_06950	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
OM983_06975	COG0860	N-Acetylmuramoyl-L-alanine amidase
OM983_06980	COG0489	protein tyrosine kinase activity
OM983_06990	COG2194	sulfuric ester hydrolase activity
OM983_06995	COG0726	polysaccharide deacetylase
OM983_07075	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
OM983_07080	COG4856	YbbR-like protein
OM983_07095	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
OM983_07100	COG0596	Alpha beta hydrolase
OM983_07120	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
OM983_07125	COG1506	peptidase
OM983_07125	COG4946	Tricorn protease homolog
OM983_07125	COG0823	Involved in the tonB-independent uptake of proteins
OM983_07160	COG2011	ABC-type metal ion transport system permease component
OM983_07165	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
OM983_07170	COG1464	Belongs to the NlpA lipoprotein family
OM983_07175	COG0604	alcohol dehydrogenase
OM983_07185	COG0277	FAD linked oxidase domain protein
OM983_07190	COG2271	Major facilitator Superfamily
OM983_07200	COG2814	Major facilitator Superfamily
OM983_07215	COG0601	transmembrane transport
OM983_07220	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
OM983_07225	COG0444	Belongs to the ABC transporter superfamily
OM983_07230	COG4608	Belongs to the ABC transporter superfamily
OM983_07235	COG4166	transmembrane transport
OM983_07245	COG2207	Transcriptional regulator
OM983_07260	COG4166	transmembrane transport
OM983_07265	COG4166	transmembrane transport
OM983_07270	COG0656	L-ascorbic acid biosynthetic process
OM983_07290	COG4149	molybdate abc transporter
OM983_07300	COG1910	domain protein
OM983_07310	COG0583	DNA-binding transcription factor activity
OM983_07315	COG0697	spore germination
OM983_07330	COG0204	Acyl-transferase
OM983_07340	COG1609	Transcriptional regulator
OM983_07350	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
OM983_07360	COG0084	hydrolase, TatD family'
OM983_07365	COG5298	Protein conserved in bacteria
OM983_07390	COG0488	(ABC) transporter
OM983_07405	COG0747	negative chemotaxis
OM983_07410	COG0601	transmembrane transport
OM983_07415	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
OM983_07420	COG0444	Belongs to the ABC transporter superfamily
OM983_07445	COG3185	4-Hydroxyphenylpyruvate dioxygenase
OM983_07450	COG0179	Fumarylacetoacetate (FAA) hydrolase
OM983_07460	COG2814	Major facilitator Superfamily
OM983_07470	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
OM983_07480	COG4294	response to UV
OM983_07485	COG0705	Rhomboid family
OM983_07485	COG0457	Tetratricopeptide repeat
OM983_07495	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
OM983_07500	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
OM983_07505	COG0864	Transcriptional regulator
OM983_07510	COG2337	Toxic component of a toxin-antitoxin (TA) module
OM983_07515	COG2183	response to ionizing radiation
OM983_07610	COG0802	atpase or kinase
OM983_07615	COG1214	PFAM Peptidase M22, glycoprotease
OM983_07620	COG0456	acetyltransferase
OM983_07630	COG0488	(ABC) transporter
OM983_07645	COG1266	CAAX protease self-immunity
OM983_07665	COG2252	PERMEase
OM983_07675	COG5002	protein histidine kinase activity
OM983_07705	COG2226	methyltransferase
OM983_07750	COG1968	undecaprenyl-diphosphatase activity
OM983_07765	COG2205	protein histidine kinase activity
OM983_07770	COG0745	RESPONSE REGULATOR receiver
OM983_07795	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
OM983_07800	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
OM983_07805	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
OM983_07815	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
OM983_07830	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
OM983_07840	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
OM983_07850	COG0151	Belongs to the GarS family
OM983_07875	COG0210	DNA helicase
OM983_07885	COG4851	CamS sex pheromone cAM373 precursor
OM983_07905	COG1335	isochorismatase
OM983_07910	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
OM983_07915	COG2011	ABC-type metal ion transport system permease component
OM983_07920	COG1464	Belongs to the NlpA lipoprotein family
OM983_07940	COG1846	Transcriptional regulator
OM983_07965	COG1597	lipid kinase activity
OM983_07970	COG0546	phosphoglycolate phosphatase activity
OM983_07975	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
OM983_07985	COG1012	belongs to the aldehyde dehydrogenase family
OM983_07990	COG2076	Multidrug Resistance protein
OM983_07995	COG2309	aminopeptidase activity
OM983_08010	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
OM983_08015	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
OM983_08020	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
OM983_08030	COG4807	Protein conserved in bacteria
OM983_08055	COG1757	Na H antiporter
OM983_08060	COG1473	amidohydrolase
OM983_08075	COG0450	alkyl hydroperoxide reductase
OM983_08095	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OM983_08100	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OM983_08105	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
OM983_08120	COG0166	Belongs to the GPI family
OM983_08155	COG5002	protein histidine kinase activity
OM983_08175	COG3541	Predicted nucleotidyltransferase
OM983_08180	COG2814	Major facilitator Superfamily
OM983_08185	COG0723	plastoquinol--plastocyanin reductase activity
OM983_08185	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
OM983_08195	COG0765	amino acid transport
OM983_08200	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
OM983_08210	COG0840	transmembrane signaling receptor activity
OM983_08215	COG0840	transmembrane signaling receptor activity
OM983_08220	COG0366	Alpha amylase catalytic
OM983_08225	COG2190	(PTS) system
OM983_08225	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
OM983_08225	COG1263	PTS System
OM983_08255	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
OM983_08270	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
OM983_08280	COG1116	anion transmembrane transporter activity
OM983_08285	COG0488	(ABC) transporter
OM983_08330	COG2270	Major facilitator Superfamily
OM983_08345	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
OM983_08360	COG2310	stress, protein
OM983_08365	COG2310	stress, protein
OM983_08370	COG2310	stress, protein
OM983_08375	COG0861	Integral membrane protein TerC family
OM983_08385	COG3853	Toxic anion resistance protein (TelA)
OM983_08400	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
OM983_08410	COG1295	ribonuclease BN
OM983_08415	COG2217	Heavy metal translocating P-type atpase
OM983_08420	COG0697	spore germination
OM983_08440	COG0586	Pfam SNARE associated Golgi protein
OM983_08455	COG3871	stress protein (general stress protein 26)
OM983_08460	COG0387	Pfam Sodium calcium exchanger
OM983_08470	COG0535	radical SAM domain protein
OM983_08495	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
OM983_08500	COG0582	viral genome integration into host DNA
OM983_08510	COG1396	sequence-specific DNA binding
OM983_08530	COG1396	sequence-specific DNA binding
OM983_08565	COG1484	DNA-dependent DNA replication
OM983_08795	COG0101	tRNA pseudouridine synthase activity
OM983_08805	COG3829	transcription factor binding
OM983_08815	COG0833	amino acid
OM983_08820	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
OM983_08850	COG1263	PTS System
OM983_08850	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
OM983_08855	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
OM983_08870	COG0463	Glycosyl transferase, family 2
OM983_08885	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
OM983_08885	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
OM983_08900	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
OM983_08920	COG1228	amidohydrolase
OM983_08925	COG1090	epimerase
OM983_08955	COG1988	membrane-bound metal-dependent
OM983_08960	COG1194	a g-specific adenine glycosylase
OM983_08985	COG1132	(ABC) transporter
OM983_08990	COG4129	membrane
OM983_08995	COG0067	glutamate synthase
OM983_08995	COG0070	glutamate synthase
OM983_08995	COG0069	glutamate synthase activity
OM983_09005	COG4555	ABC transporter
OM983_09025	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
OM983_09030	COG0735	belongs to the Fur family
OM983_09145	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
OM983_09150	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
OM983_09160	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
OM983_09170	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
OM983_09180	COG2766	serine protein kinase
OM983_09200	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
OM983_09210	COG1585	Membrane protein implicated in regulation of membrane protease activity
OM983_09215	COG2268	Band 7 protein
OM983_09225	COG3290	protein histidine kinase activity
OM983_09235	COG2851	Citrate transporter
OM983_09255	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
OM983_09260	COG3842	ATPase activity
OM983_09265	COG1175	transmembrane transport
OM983_09270	COG0395	ABC-type sugar transport system, permease component
OM983_09280	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
OM983_09285	COG0745	RESPONSE REGULATOR receiver
OM983_09290	COG5002	protein histidine kinase activity
OM983_09300	COG4990	cell redox homeostasis
OM983_09310	COG3290	protein histidine kinase activity
OM983_09315	COG4565	transcriptional regulatory protein
OM983_09320	COG3493	citrate carrier protein
OM983_09325	COG0281	malic enzyme
OM983_09340	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
OM983_09350	COG5002	protein histidine kinase activity
OM983_09355	COG0745	RESPONSE REGULATOR receiver
OM983_09365	COG0454	-acetyltransferase
OM983_09365	COG0456	acetyltransferase
OM983_09370	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
OM983_09375	COG3383	formate dehydrogenase (NAD+) activity
OM983_09395	COG0531	amino acid
OM983_09400	COG0640	Transcriptional regulator
OM983_09405	COG2217	Heavy metal translocating P-type atpase
OM983_09410	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
OM983_09425	COG3227	Zinc metalloprotease (Elastase)
OM983_09445	COG2720	vancomycin resistance protein
OM983_09450	COG1316	TRANSCRIPTIONal
OM983_09455	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
OM983_09460	COG0346	lactoylglutathione lyase activity
OM983_09470	COG1027	Aspartate ammonia-lyase
OM983_09475	COG1620	l-lactate permease
OM983_09490	COG3104	oligopeptide transport
OM983_09495	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
OM983_09500	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OM983_09505	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OM983_09515	COG2226	methyltransferase
OM983_09520	COG0156	8-amino-7-oxononanoate synthase activity
OM983_09535	COG4548	von Willebrand factor, type A
OM983_09540	COG0714	Associated with various cellular activities
OM983_09545	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
OM983_09565	COG0531	amino acid
OM983_09570	COG2188	Transcriptional regulator
OM983_09575	COG1263	PTS System
OM983_09575	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
OM983_09580	COG0366	Alpha amylase catalytic
OM983_09595	COG0697	spore germination
OM983_09605	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
OM983_09610	COG1115	amino acid carrier protein
OM983_09615	COG1126	abc transporter atp-binding protein
OM983_09620	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
OM983_09625	COG0765	amino acid transport
OM983_09630	COG0765	amino acid transport
OM983_09635	COG0833	amino acid
OM983_09660	COG2378	regulation of single-species biofilm formation
OM983_09665	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
OM983_09670	COG5002	protein histidine kinase activity
OM983_09685	COG0659	secondary active sulfate transmembrane transporter activity
OM983_09700	COG0747	negative chemotaxis
OM983_09710	COG0601	transmembrane transport
OM983_09715	COG4608	Belongs to the ABC transporter superfamily
OM983_09725	COG2271	Major facilitator Superfamily
OM983_09730	COG1846	Transcriptional regulator
OM983_09740	COG1609	Transcriptional regulator
OM983_09745	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
OM983_09760	COG1172	Belongs to the binding-protein-dependent transport system permease family
OM983_09765	COG1879	ABC-type sugar transport system periplasmic component
OM983_09790	COG1063	alcohol dehydrogenase
OM983_09805	COG3568	Endonuclease Exonuclease Phosphatase
OM983_09830	COG1968	undecaprenyl-diphosphatase activity
OM983_09835	COG0840	transmembrane signaling receptor activity
OM983_09840	COG3584	3D domain protein
OM983_09840	COG1388	LysM domain
OM983_09845	COG1476	TRANSCRIPTIONal
OM983_09860	COG3104	oligopeptide transport
OM983_09865	COG1114	Component of the transport system for branched-chain amino acids
OM983_09880	COG1113	amino acid transport
OM983_09885	COG2252	PERMEase
OM983_09910	COG0475	glutathione-regulated potassium exporter activity
OM983_09910	COG0569	domain protein
OM983_09925	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
OM983_09930	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
OM983_09935	COG4990	cell redox homeostasis
OM983_09950	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
OM983_09955	COG0697	spore germination
OM983_09960	COG0531	amino acid
OM983_09970	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
OM983_09975	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
OM983_09980	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
OM983_09980	COG1918	ferrous iron import across plasma membrane
OM983_09985	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
OM983_09990	COG0573	inorganic phosphate transmembrane transporter activity
OM983_09995	COG0581	inorganic phosphate transmembrane transporter activity
OM983_10005	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
OM983_10120	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
OM983_10140	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
OM983_10145	COG1116	anion transmembrane transporter activity
OM983_10150	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
OM983_10155	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
OM983_10160	COG0352	thiamine-phosphate diphosphorylase activity
OM983_10165	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
OM983_10170	COG2104	thiamine diphosphate biosynthetic process
OM983_10180	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
OM983_10185	COG0351	phosphomethylpyrimidine kinase
OM983_10225	COG2205	protein histidine kinase activity
OM983_10230	COG2814	Major facilitator Superfamily
OM983_10235	COG1846	Transcriptional regulator
OM983_10250	COG2252	PERMEase
OM983_10255	COG1028	Short-chain dehydrogenase reductase Sdr
OM983_10270	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
OM983_10275	COG1621	beta-fructofuranosidase activity
OM983_10280	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
OM983_10280	COG1263	PTS System
OM983_10285	COG1609	Transcriptional regulator
OM983_10295	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
OM983_10300	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
OM983_10335	COG0778	Nitroreductase
OM983_10340	COG2719	SpoVR family
OM983_10365	COG0446	pyridine nucleotide-disulphide oxidoreductase
OM983_10370	COG1937	Protein conserved in bacteria
OM983_10375	COG0425	Belongs to the sulfur carrier protein TusA family
OM983_10375	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
OM983_10380	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OM983_10380	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
OM983_10385	COG0425	Belongs to the sulfur carrier protein TusA family
OM983_10400	COG2210	Belongs to the sulfur carrier protein TusA family
OM983_10405	COG0730	response to heat
OM983_10415	COG1316	TRANSCRIPTIONal
OM983_10420	COG0604	alcohol dehydrogenase
OM983_10425	COG1283	sodium-dependent phosphate transmembrane transporter activity
OM983_10440	COG3711	transcriptional antiterminator
OM983_10440	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
OM983_10445	COG1447	Phosphotransferase system cellobiose-specific component IIA
OM983_10450	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
OM983_10470	COG1388	LysM domain
OM983_10470	COG3584	3D domain protein
OM983_10475	COG0577	efflux transmembrane transporter activity
OM983_10480	COG1136	(ABC) transporter
OM983_10490	COG5522	Integral membrane protein (intg_mem_TP0381)
OM983_10505	COG1114	Component of the transport system for branched-chain amino acids
OM983_10510	COG3546	catalase activity
OM983_10545	COG0586	Pfam SNARE associated Golgi protein
OM983_10580	COG0531	amino acid
OM983_10585	COG0475	glutathione-regulated potassium exporter activity
OM983_10595	COG1737	Transcriptional regulator
OM983_10605	COG1263	PTS System
OM983_10605	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
OM983_10615	COG2259	Doxx family
OM983_10630	COG0697	spore germination
OM983_10635	COG1522	sequence-specific DNA binding
OM983_10650	COG2076	Multidrug Resistance protein
OM983_10655	COG1309	transcriptional regulator
OM983_10660	COG2814	Major facilitator Superfamily
OM983_10665	COG1733	regulation of RNA biosynthetic process
OM983_10675	COG2249	NAD(P)H dehydrogenase (quinone) activity
OM983_10680	COG4533	DNA binding
OM983_10685	COG2211	Major facilitator Superfamily
OM983_10695	COG0693	protein deglycase activity
OM983_10700	COG0753	catalase activity
OM983_10710	COG0531	amino acid
OM983_10715	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
OM983_10725	COG1012	belongs to the aldehyde dehydrogenase family
OM983_10730	COG1132	(ABC) transporter
OM983_10740	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
OM983_10745	COG0765	amino acid transport
OM983_10750	COG1126	abc transporter atp-binding protein
OM983_10765	COG0189	ligase activity
OM983_10795	COG0028	Belongs to the TPP enzyme family
OM983_10800	COG3527	Alpha-acetolactate decarboxylase
OM983_10815	COG0561	phosphatase activity
OM983_10830	COG0635	Involved in the biosynthesis of porphyrin-containing compound
OM983_10845	COG0659	secondary active sulfate transmembrane transporter activity
OM983_10865	COG0653	protein targeting
OM983_10870	COG2244	polysaccharide biosynthetic process
OM983_10880	COG0860	N-Acetylmuramoyl-L-alanine amidase
OM983_10885	COG4196	transglutaminase domain protein
OM983_10900	COG1696	Membrane protein involved in D-alanine export
OM983_10915	COG1024	Enoyl-CoA hydratase
OM983_10935	COG1363	Peptidase, m42
OM983_10955	COG3938	Belongs to the proline racemase family
OM983_10995	COG0601	transmembrane transport
OM983_11000	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
OM983_11010	COG4608	Belongs to the ABC transporter superfamily
OM983_11045	COG0477	Major facilitator Superfamily
OM983_11050	COG3290	protein histidine kinase activity
OM983_11055	COG4565	transcriptional regulatory protein
OM983_11060	COG3181	Tripartite tricarboxylate transporter family receptor
OM983_11090	COG0789	Transcriptional regulator
OM983_11090	COG4978	Transcriptional regulator
OM983_11105	COG0305	Participates in initiation and elongation during chromosome replication
OM983_11145	COG0477	Major facilitator Superfamily
OM983_11190	COG3320	Male sterility
OM983_11190	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
OM983_11195	COG1309	transcriptional regulator
OM983_11215	COG1183	phosphatidylcholine synthase activity
OM983_11235	COG2376	Dihydroxyacetone kinase
OM983_11245	COG2376	Dihydroxyacetone kinase
OM983_11250	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
OM983_11255	COG1959	2 iron, 2 sulfur cluster binding
OM983_11285	COG2770	Histidine kinase
OM983_11285	COG3437	response regulator, receiver
OM983_11335	COG3237	CsbD-like
OM983_11360	COG1191	sigma factor activity
OM983_11370	COG2208	phosphoserine phosphatase activity
OM983_11375	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
OM983_11380	COG0784	Response regulator, receiver
OM983_11380	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
OM983_11380	COG2198	Histidine kinase
OM983_11380	COG2205	protein histidine kinase activity
OM983_11435	COG0420	3'-5' exonuclease activity
OM983_11460	COG1309	transcriptional regulator
OM983_11465	COG2814	Major facilitator Superfamily
OM983_11470	COG0346	lactoylglutathione lyase activity
OM983_11475	COG0346	lactoylglutathione lyase activity
OM983_11480	COG0457	Tetratricopeptide repeat
OM983_11490	COG2267	carboxylic ester hydrolase activity
OM983_11510	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
OM983_11515	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
OM983_11525	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
OM983_11565	COG0477	Major facilitator Superfamily
OM983_11570	COG0477	Major facilitator Superfamily
OM983_11580	COG3973	AAA domain
OM983_11585	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
OM983_11605	COG4980	gas vesicle protein
OM983_11610	COG0537	adenosine 5'-monophosphoramidase activity
OM983_11615	COG1131	(ABC) transporter
OM983_11620	COG4473	ABC transporter
OM983_11635	COG1309	transcriptional regulator
OM983_11645	COG3402	PFAM membrane-flanked domain
OM983_11690	COG3402	PFAM membrane-flanked domain
OM983_11695	COG3428	Bacterial PH domain
OM983_11700	COG2329	Antibiotic biosynthesis monooxygenase
OM983_11705	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
OM983_11710	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
OM983_11715	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
OM983_11720	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
OM983_11755	COG1309	transcriptional regulator
OM983_11760	COG1511	domain protein
OM983_11795	COG1234	tRNA 3'-trailer cleavage
OM983_11800	COG0095	Lipoate-protein ligase
OM983_11810	COG0318	PFAM AMP-dependent synthetase and ligase
OM983_11840	COG3209	COG3209 Rhs family protein
OM983_11880	COG1078	dGTPase activity
OM983_11890	COG1595	DNA-templated transcription, initiation
OM983_11895	COG2207	Transcriptional regulator
OM983_11895	COG3708	Transcriptional regulator
OM983_11910	COG2205	protein histidine kinase activity
OM983_11915	COG0745	RESPONSE REGULATOR receiver
OM983_11940	COG0501	Belongs to the peptidase M48B family
OM983_11945	COG0840	transmembrane signaling receptor activity
OM983_11950	COG0697	spore germination
OM983_11970	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
OM983_11975	COG2224	Isocitrate lyase
OM983_12000	COG4903	ComK protein
OM983_12005	COG0398	Pfam SNARE associated Golgi protein
OM983_12015	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
OM983_12020	COG1074	ATP-dependent DNA helicase activity
OM983_12065	COG0179	Fumarylacetoacetate (FAA) hydrolase
OM983_12090	COG0367	asparagine synthase
OM983_12095	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
OM983_12100	COG0753	catalase activity
OM983_12105	COG0004	ammonium transporteR
OM983_12125	COG2996	Protein conserved in bacteria
OM983_12135	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
OM983_12145	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
OM983_12160	COG0561	phosphatase activity
OM983_12170	COG0542	response to heat
OM983_12180	COG2267	carboxylic ester hydrolase activity
OM983_12195	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
OM983_12200	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
OM983_12205	COG5504	Zn-dependent protease
OM983_12215	COG0180	Tryptophanyl-tRNA synthetase
OM983_12225	COG4166	transmembrane transport
OM983_12230	COG0601	transmembrane transport
OM983_12235	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
OM983_12240	COG0444	Belongs to the ABC transporter superfamily
OM983_12245	COG4608	Belongs to the ABC transporter superfamily
OM983_12250	COG0534	Mate efflux family protein
OM983_12255	COG4166	transmembrane transport
OM983_12270	COG0861	Integral membrane protein TerC family
OM983_12275	COG4862	establishment of competence for transformation
OM983_12280	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
OM983_12290	COG1164	Oligoendopeptidase f
OM983_12300	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
OM983_12305	COG2346	COG2346, Truncated hemoglobins
OM983_12310	COG4116	CYTH
OM983_12320	COG2357	RelA SpoT domain protein
OM983_12330	COG0564	pseudouridine synthase activity
OM983_12350	COG1216	Glycosyl transferase, family 2
OM983_12350	COG0463	Glycosyl transferase, family 2
OM983_12370	COG0457	Tetratricopeptide repeat
OM983_12370	COG0463	Glycosyl transferase, family 2
OM983_12390	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
OM983_12405	COG1091	dTDP-4-dehydrorhamnose reductase activity
OM983_12450	COG2153	protein acetylation
OM983_12460	COG2382	esterase
OM983_12475	COG5492	domain, Protein
OM983_12480	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
OM983_12490	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
OM983_12490	COG0512	Glutamine amidotransferase of anthranilate synthase
OM983_12525	COG1620	l-lactate permease
OM983_12530	COG5634	Uncharacterized conserved protein (DUF2278)
OM983_12585	COG0508	dehydrogenase complex catalyzes the overall conversion of
OM983_12595	COG1476	TRANSCRIPTIONal
OM983_12655	COG2226	methyltransferase
OM983_12665	COG1686	Belongs to the peptidase S11 family
OM983_12670	COG0681	Belongs to the peptidase S26 family
OM983_12705	COG1012	belongs to the aldehyde dehydrogenase family
OM983_12710	COG3842	ATPase activity
OM983_12715	COG1176	ABC-type spermidine putrescine transport system, permease component I
OM983_12720	COG1177	transmembrane transport
OM983_12725	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
OM983_12735	COG2409	Drug exporters of the RND superfamily
OM983_12745	COG0564	pseudouridine synthase activity
OM983_12755	COG2340	Cysteine-rich secretory protein family
OM983_12760	COG0247	lactate metabolic process
OM983_12765	COG0277	FAD linked oxidase domain protein
OM983_12770	COG3835	regulator
OM983_12780	COG0745	RESPONSE REGULATOR receiver
OM983_12785	COG5002	protein histidine kinase activity
OM983_12790	COG2186	Transcriptional regulator
OM983_12810	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
OM983_12820	COG2116	formate transmembrane transporter activity
OM983_12825	COG0861	Integral membrane protein TerC family
OM983_12830	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
OM983_12840	COG2030	dehydratase
OM983_12860	COG1028	Short-chain dehydrogenase reductase Sdr
OM983_12865	COG3243	poly(R)-hydroxyalkanoic acid synthase
OM983_12870	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
OM983_12875	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
OM983_12890	COG1840	ABC-type Fe3 transport system, periplasmic component
OM983_12920	COG1349	DNA-binding transcription factor activity
OM983_12940	COG2861	carbohydrate metabolic process
OM983_12950	COG3852	Histidine kinase
OM983_12955	COG1846	Transcriptional regulator
OM983_12965	COG2318	DinB family
OM983_12975	COG5002	protein histidine kinase activity
OM983_12985	COG0720	synthase
OM983_13000	COG4873	Protein conserved in bacteria
OM983_13030	COG1780	Probably involved in ribonucleotide reductase function
OM983_13050	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
OM983_13055	COG1725	Transcriptional regulator
OM983_13060	COG1131	(ABC) transporter
OM983_13070	COG1131	(ABC) transporter
OM983_13075	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
OM983_13090	COG1522	sequence-specific DNA binding
OM983_13100	COG1335	isochorismatase
OM983_13110	COG1619	proteins homologs of microcin C7 resistance protein MccF
OM983_13115	COG2070	2-Nitropropane dioxygenase
OM983_13120	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
OM983_13130	COG1696	Membrane protein involved in D-alanine export
OM983_13155	COG0716	FMN binding
OM983_13170	COG3173	Aminoglycoside phosphotransferase
OM983_13190	COG0534	Mate efflux family protein
OM983_13195	COG1968	undecaprenyl-diphosphatase activity
OM983_13210	COG1846	Transcriptional regulator
OM983_13220	COG1301	dicarboxylic acid transport
OM983_13225	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
OM983_13230	COG4709	membrane
OM983_13235	COG3874	Sporulation protein YtfJ
OM983_13255	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
OM983_13260	COG0028	Belongs to the TPP enzyme family
OM983_13265	COG0440	acetolactate synthase activity
OM983_13270	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
OM983_13280	COG0473	3-isopropylmalate dehydrogenase activity
OM983_13305	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
OM983_13340	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
OM983_13355	COG1183	phosphatidylcholine synthase activity
OM983_13360	COG1368	sulfuric ester hydrolase activity
OM983_13370	COG0019	diaminopimelate decarboxylase activity
OM983_13390	COG0529	Catalyzes the synthesis of activated sulfate
OM983_13395	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
OM983_13415	COG1648	precorrin-2 dehydrogenase activity
OM983_13420	COG0733	neurotransmitter:sodium symporter activity
OM983_13440	COG1757	Na H antiporter
OM983_13455	COG4758	membrane
OM983_13460	COG4585	Histidine kinase
OM983_13465	COG2197	response regulator
OM983_13475	COG1114	Component of the transport system for branched-chain amino acids
OM983_13485	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
OM983_13510	COG1017	nitric oxide dioxygenase activity
OM983_13510	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
OM983_13525	COG0730	response to heat
OM983_13530	COG0306	phosphate transporter
OM983_13535	COG1392	Phosphate transport regulator
OM983_13540	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
OM983_13560	COG1801	Protein of unknown function DUF72
OM983_13570	COG0582	viral genome integration into host DNA
OM983_13575	COG5002	protein histidine kinase activity
OM983_13595	COG0392	lysyltransferase activity
OM983_13595	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
OM983_13610	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
OM983_13615	COG1686	Belongs to the peptidase S11 family
OM983_13620	COG2715	membrane protein required for spore maturation
OM983_13625	COG0700	Nucleoside recognition
OM983_13630	COG1187	pseudouridine synthase activity
OM983_13640	COG1333	cytochrome c biogenesis protein
OM983_13645	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
OM983_13650	COG0745	RESPONSE REGULATOR receiver
OM983_13655	COG5002	protein histidine kinase activity
OM983_13660	COG2096	Adenosyltransferase
OM983_13675	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
OM983_13680	COG1141	Ferredoxin
OM983_13685	COG4955	Helix-turn-helix domain
OM983_13690	COG0514	ATP-dependent DNA helicase (RecQ)
OM983_13695	COG1266	CAAX protease self-immunity
OM983_13715	COG4862	establishment of competence for transformation
OM983_13720	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
OM983_13740	COG0492	ferredoxin-NADP+ reductase activity
OM983_13745	COG0252	asparaginase activity
OM983_13815	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
OM983_13830	COG0142	geranyltranstransferase activity
OM983_13840	COG0142	geranyltranstransferase activity
OM983_13860	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
OM983_13865	COG0457	Tetratricopeptide repeat
OM983_13885	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
OM983_13895	COG4347	Protein of unknown function (DUF1405)
OM983_13910	COG2738	Putative neutral zinc metallopeptidase
OM983_13920	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
OM983_13925	COG1694	Mazg nucleotide pyrophosphohydrolase
OM983_13940	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
OM983_13945	COG0438	transferase activity, transferring glycosyl groups
OM983_13980	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
OM983_13980	COG1199	ATP-dependent helicase activity
OM983_14000	COG3935	DnaD domain protein
OM983_14005	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
OM983_14015	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
OM983_14015	COG4499	WXG100 protein secretion system (Wss), protein YukC
OM983_14075	COG0116	Belongs to the methyltransferase superfamily
OM983_14085	COG1199	ATP-dependent helicase activity
OM983_14090	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
OM983_14100	COG3173	Aminoglycoside phosphotransferase
OM983_14105	COG0024	Methionine aminopeptidase
OM983_14115	COG2233	PERMEase
OM983_14120	COG2311	Membrane
OM983_14125	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
OM983_14135	COG0456	acetyltransferase
OM983_14185	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
OM983_14210	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
OM983_14225	COG1215	transferase activity, transferring glycosyl groups
OM983_14230	COG0438	transferase activity, transferring glycosyl groups
OM983_14245	COG0454	-acetyltransferase
OM983_14265	COG0328	RNA-DNA hybrid ribonuclease activity
OM983_14305	COG1280	lysine exporter protein (LysE YggA)
OM983_14320	COG3162	membrane
OM983_14325	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
OM983_14330	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
OM983_14340	COG0475	glutathione-regulated potassium exporter activity
OM983_14345	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
OM983_14350	COG4978	Transcriptional regulator
OM983_14350	COG0789	Transcriptional regulator
OM983_14360	COG2323	membrane
OM983_14365	COG1434	Gram-negative-bacterium-type cell wall biogenesis
OM983_14420	COG1923	regulation of RNA biosynthetic process
OM983_14430	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
OM983_14435	COG1360	Flagellar Motor Protein
OM983_14440	COG2201	protein-glutamate methylesterase activity
OM983_14450	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
OM983_14450	COG1776	CheC inhibitor of MCP methylation
OM983_14465	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
OM983_14485	COG1256	bacterial-type flagellum assembly
OM983_14510	COG1815	bacterial-type flagellum-dependent cell motility
OM983_14515	COG1558	bacterial-type flagellum-dependent cell motility
OM983_14530	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
OM983_14540	COG1157	protein secretion by the type III secretion system
OM983_14585	COG0463	Glycosyl transferase, family 2
OM983_14610	COG0457	Tetratricopeptide repeat
OM983_14610	COG0463	Glycosyl transferase, family 2
OM983_14625	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
OM983_14630	COG0741	lytic transglycosylase activity
OM983_14645	COG1776	CheC inhibitor of MCP methylation
OM983_14645	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
OM983_14655	COG1338	Plays a role in the flagellum-specific transport system
OM983_14660	COG1987	bacterial-type flagellum assembly
OM983_14670	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
OM983_14675	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
OM983_14685	COG4786	Flagellar basal body rod
OM983_14690	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
OM983_14715	COG1309	transcriptional regulator
OM983_14735	COG2329	Antibiotic biosynthesis monooxygenase
OM983_14760	COG0583	DNA-binding transcription factor activity
OM983_14770	COG0725	ABC transporter, periplasmic molybdate-binding protein
OM983_14780	COG1234	tRNA 3'-trailer cleavage
OM983_14805	COG1686	Belongs to the peptidase S11 family
OM983_14815	COG0406	alpha-ribazole phosphatase activity
OM983_14845	COG0367	asparagine synthase
OM983_14875	COG1802	Transcriptional regulator
OM983_14880	COG0697	spore germination
OM983_14885	COG0523	cobalamin synthesis protein
OM983_14890	COG0701	Predicted permease
OM983_14900	COG0438	transferase activity, transferring glycosyl groups
OM983_14900	COG1216	Glycosyl transferase, family 2
OM983_14905	COG1757	Na H antiporter
OM983_14910	COG0114	fumarate hydratase activity
OM983_14935	COG3340	Belongs to the peptidase S51 family
OM983_14955	COG0785	Cytochrome C biogenesis protein
OM983_14985	COG2733	membrane
OM983_15020	COG1131	(ABC) transporter
OM983_15035	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
OM983_15040	COG0528	UMP kinase activity
OM983_15050	COG1027	Aspartate ammonia-lyase
OM983_15055	COG0281	malic enzyme
OM983_15060	COG4191	Histidine kinase
OM983_15065	COG0784	Response regulator, receiver
OM983_15070	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
OM983_15130	COG0860	N-Acetylmuramoyl-L-alanine amidase
OM983_15140	COG2814	Major facilitator Superfamily
OM983_15155	COG1966	Carbon starvation protein
OM983_15170	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
OM983_15180	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
OM983_15190	COG2223	nitrite transmembrane transporter activity
OM983_15195	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
OM983_15210	COG2244	polysaccharide biosynthetic process
OM983_15215	COG0733	neurotransmitter:sodium symporter activity
OM983_15225	COG5566	PFAM Mor transcription activator
OM983_15230	COG2323	membrane
OM983_15245	COG2084	Dehydrogenase
OM983_15260	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
OM983_15270	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
OM983_15275	COG0028	Belongs to the TPP enzyme family
OM983_15280	COG0440	acetolactate synthase activity
OM983_15285	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
OM983_15295	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
OM983_15320	COG2814	Major facilitator Superfamily
OM983_15325	COG3384	dioxygenase
OM983_15335	COG3279	Response regulator of the LytR AlgR family
OM983_15340	COG0427	acetyl-CoA hydrolase
OM983_15360	COG1073	alpha beta
OM983_15390	COG0535	radical SAM domain protein
OM983_15395	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
OM983_15415	COG1914	H( )-stimulated, divalent metal cation uptake system
OM983_15430	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
OM983_15465	COG2390	Transcriptional regulator
OM983_15475	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
OM983_15480	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
OM983_15495	COG4224	UPF0291 protein
OM983_15515	COG0006	proline dipeptidase activity
OM983_15520	COG2132	Multicopper oxidase
OM983_15535	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
OM983_15550	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
OM983_15565	COG1276	copper resistance
OM983_15565	COG2372	response to copper ion
OM983_15570	COG4549	nuclear export factor GLE1
OM983_15580	COG0697	spore germination
OM983_15585	COG0583	DNA-binding transcription factor activity
OM983_15590	COG1959	2 iron, 2 sulfur cluster binding
OM983_15595	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
OM983_15600	COG0778	Nitroreductase
OM983_15615	COG0628	permease
OM983_15625	COG1231	oxidoreductase activity
OM983_15630	COG0523	cobalamin synthesis protein
OM983_15645	COG0318	PFAM AMP-dependent synthetase and ligase
OM983_15650	COG2030	dehydratase
OM983_15655	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
OM983_15665	COG0411	ABC transporter
OM983_15685	COG0583	DNA-binding transcription factor activity
OM983_15695	COG1942	4-Oxalocrotonate Tautomerase
OM983_15705	COG1846	Transcriptional regulator
OM983_15715	COG1271	oxidase subunit
OM983_15720	COG1294	oxidase, subunit
OM983_15725	COG4988	ABC transporter
OM983_15730	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
OM983_15750	COG1686	Belongs to the peptidase S11 family
OM983_15765	COG0791	NLP P60 protein
OM983_15765	COG1388	LysM domain
OM983_15780	COG0745	RESPONSE REGULATOR receiver
OM983_15785	COG5002	protein histidine kinase activity
OM983_15795	COG0300	oxidoreductase activity
OM983_15830	COG0460	homoserine dehydrogenase
OM983_15855	COG1316	TRANSCRIPTIONal
OM983_15865	COG0745	RESPONSE REGULATOR receiver
OM983_15870	COG5002	protein histidine kinase activity
OM983_15885	COG1285	pathogenesis
OM983_15890	COG1247	-acetyltransferase
OM983_15910	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
OM983_15920	COG1082	Xylose isomerase domain protein TIM barrel
OM983_15935	COG1279	arginine transmembrane transporter activity
OM983_15945	COG1752	Esterase of the alpha-beta hydrolase superfamily
OM983_15985	COG2002	toxin-antitoxin pair type II binding
OM983_15990	COG1404	Belongs to the peptidase S8 family
OM983_15995	COG0640	Transcriptional regulator
OM983_16000	COG0667	Aldo Keto reductase
OM983_16005	COG2814	Major facilitator Superfamily
OM983_16030	COG0840	transmembrane signaling receptor activity
OM983_16045	COG3949	Membrane
OM983_16050	COG0783	Belongs to the Dps family
OM983_16065	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
OM983_16075	COG1231	oxidoreductase activity
OM983_16085	COG4989	oxidoreductase activity
OM983_16090	COG0523	cobalamin synthesis protein
OM983_16095	COG0456	acetyltransferase
OM983_16155	COG0803	Belongs to the bacterial solute-binding protein 9 family
OM983_16155	COG3443	Belongs to the bacterial solute-binding protein 9 family
OM983_16165	COG0702	epimerase
OM983_16175	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
OM983_16185	COG4166	transmembrane transport
OM983_16200	COG0406	alpha-ribazole phosphatase activity
OM983_16210	COG5337	Spore coat protein CotH
OM983_16215	COG1051	belongs to the nudix hydrolase family
OM983_16220	COG0586	Pfam SNARE associated Golgi protein
OM983_16225	COG2244	polysaccharide biosynthetic process
OM983_16235	COG0701	Predicted permease
OM983_16240	COG3689	TIGRFAM TIGR03943 family protein
OM983_16245	COG1607	acyl-coa hydrolase
OM983_16270	COG0702	epimerase
OM983_16275	COG2839	Protein conserved in bacteria
OM983_16280	COG1253	flavin adenine dinucleotide binding
OM983_16295	COG1114	Component of the transport system for branched-chain amino acids
OM983_16300	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
OM983_16320	COG0860	N-Acetylmuramoyl-L-alanine amidase
OM983_16330	COG1876	peptidase activity
OM983_16340	COG0154	amidase activity
OM983_16345	COG2211	Major facilitator Superfamily
OM983_16365	COG0561	phosphatase activity
OM983_16375	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
OM983_16380	COG4106	trans-aconitate 2-methyltransferase activity
OM983_16395	COG1819	glycosyl
OM983_16400	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
OM983_16405	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
OM983_16440	COG0456	acetyltransferase
OM983_16495	COG3874	Sporulation protein YtfJ
OM983_16520	COG2226	methyltransferase
OM983_16545	COG0346	lactoylglutathione lyase activity
OM983_16555	COG0604	alcohol dehydrogenase
OM983_16560	COG1595	DNA-templated transcription, initiation
OM983_16585	COG0386	Belongs to the glutathione peroxidase family
OM983_16595	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
OM983_16600	COG0714	Associated with various cellular activities
OM983_16615	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
OM983_16620	COG1140	nitrate reductase beta subunit
OM983_16625	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
OM983_16630	COG2181	nitrate reductase activity
OM983_16650	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
OM983_16655	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
OM983_16660	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
OM983_16665	COG0303	'Molybdopterin
OM983_16670	COG0314	molybdopterin synthase activity
OM983_16680	COG2223	nitrite transmembrane transporter activity
OM983_16695	COG1648	precorrin-2 dehydrogenase activity
OM983_16705	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
OM983_16705	COG1587	Uroporphyrinogen-III synthase
OM983_16710	COG2146	nitrite reductase [NAD(P)H] activity
OM983_16715	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
OM983_16720	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
OM983_16755	COG2359	stage V sporulation protein S
OM983_16780	COG1418	mRNA catabolic process
OM983_16785	COG0488	(ABC) transporter
OM983_16800	COG0629	single-stranded DNA binding
OM983_16815	COG1413	lyase activity
OM983_16830	COG2136	Putative SAM-dependent methyltransferase
OM983_16830	COG2521	methyltransferase
OM983_16835	COG0018	arginyl-trna synthetase
OM983_16860	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
OM983_16880	COG0017	Asparaginyl-tRNA synthetase
OM983_16900	COG1674	ftsk spoiiie
OM983_16970	COG1929	Belongs to the glycerate kinase type-1 family
OM983_16975	COG0471	metal ion transport
OM983_16980	COG0745	RESPONSE REGULATOR receiver
OM983_16985	COG5002	protein histidine kinase activity
OM983_16985	COG3850	Histidine kinase
OM983_17000	COG0733	neurotransmitter:sodium symporter activity
OM983_17025	COG2610	gluconate transmembrane transporter activity
OM983_17030	COG1454	alcohol dehydrogenase
OM983_17035	COG1794	racemase activity, acting on amino acids and derivatives
OM983_17045	COG0456	acetyltransferase
OM983_17060	COG1131	(ABC) transporter
OM983_17075	COG0546	phosphoglycolate phosphatase activity
OM983_17095	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
OM983_17110	COG0768	penicillin binding
OM983_17115	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
OM983_17120	COG0204	Acyl-transferase
OM983_17125	COG1272	protein, Hemolysin III
OM983_17135	COG0805	protein transport
OM983_17145	COG1307	EDD domain protein, DegV family
OM983_17150	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
OM983_17155	COG1999	signal sequence binding
OM983_17160	COG0071	Belongs to the small heat shock protein (HSP20) family
OM983_17165	COG0367	asparagine synthase
OM983_17180	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
OM983_17185	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
OM983_17220	COG0668	transmembrane transport
OM983_17225	COG4585	Histidine kinase
OM983_17225	COG2203	Gaf domain
OM983_17230	COG2197	response regulator
OM983_17240	COG1064	alcohol dehydrogenase
OM983_17295	COG1125	glycine betaine transport
OM983_17295	COG0517	IMP dehydrogenase activity
OM983_17300	COG1174	glycine betaine transport
OM983_17335	COG1253	flavin adenine dinucleotide binding
OM983_17340	COG1012	belongs to the aldehyde dehydrogenase family
OM983_17345	COG5506	Protein of unknown function (DUF1694)
OM983_17360	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
OM983_17365	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
OM983_17370	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
OM983_17375	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
OM983_17380	COG0456	acetyltransferase
OM983_17385	COG3829	transcription factor binding
OM983_17390	COG1509	lysine 2,3-aminomutase activity
OM983_17430	COG4326	sporulation control protein
OM983_17435	COG0671	phosphoesterase, PA-phosphatase related
OM983_17440	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
OM983_17445	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
OM983_17475	COG1715	Restriction endonuclease
OM983_17475	COG1787	Restriction endonuclease
OM983_17565	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
OM983_17605	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
OM983_17605	COG4499	WXG100 protein secretion system (Wss), protein YukC
OM983_17615	COG2814	Major facilitator Superfamily
OM983_17620	COG4841	protein insertion into membrane
OM983_17625	COG0372	Belongs to the citrate synthase family
OM983_17630	COG2079	MmgE PrpD family protein
OM983_17635	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
OM983_17640	COG1960	acyl-CoA dehydrogenase activity
OM983_17645	COG2084	Dehydrogenase
OM983_17655	COG1280	lysine exporter protein (LysE YggA)
OM983_17660	COG1024	Enoyl-CoA hydratase
OM983_17675	COG0420	3'-5' exonuclease activity
OM983_17680	COG0419	ATPase involved in DNA repair
OM983_17700	COG2223	nitrite transmembrane transporter activity
OM983_17705	COG1028	Short-chain dehydrogenase reductase Sdr
OM983_17710	COG1169	isochorismate synthase
OM983_17715	COG1021	2,3-dihydroxybenzoate-AMP ligase
OM983_17720	COG1535	isochorismatase
OM983_17720	COG3433	isochorismatase activity
OM983_17725	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
OM983_17730	COG3251	PFAM MbtH domain protein
OM983_17735	COG2814	Major facilitator Superfamily
OM983_17750	COG0776	regulation of translation
OM983_17760	COG2318	DinB family
OM983_17770	COG1115	amino acid carrier protein
OM983_17785	COG2329	Antibiotic biosynthesis monooxygenase
OM983_17790	COG1187	pseudouridine synthase activity
OM983_17795	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
OM983_17810	COG0596	Alpha beta hydrolase
OM983_17815	COG2814	Major facilitator Superfamily
OM983_17835	COG2226	methyltransferase
OM983_17880	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OM983_17915	COG1247	-acetyltransferase
OM983_17945	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
OM983_17955	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
OM983_17965	COG1278	Cold shock
OM983_17980	COG0010	Belongs to the arginase family
OM983_17985	COG0561	phosphatase activity
OM983_18025	COG0583	DNA-binding transcription factor activity
OM983_18030	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
OM983_18045	COG0583	DNA-binding transcription factor activity
OM983_18050	COG2258	MOSC domain
OM983_18065	COG1132	(ABC) transporter
OM983_18070	COG1132	(ABC) transporter
OM983_18090	COG1396	sequence-specific DNA binding
OM983_18115	COG3075	Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor
OM983_18120	COG1595	DNA-templated transcription, initiation
OM983_18145	COG1649	PFAM Uncharacterised BCR, COG1649
OM983_18170	COG2971	BadF BadG BcrA BcrD
OM983_18175	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
OM983_18180	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
OM983_18200	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OM983_18230	COG1309	transcriptional regulator
OM983_18245	COG0577	efflux transmembrane transporter activity
OM983_18245	COG1136	(ABC) transporter
OM983_18250	COG0500	methyltransferase
OM983_18250	COG3615	Tellurite resistance protein tehB
OM983_18260	COG2226	methyltransferase
OM983_18265	COG3961	Belongs to the TPP enzyme family
OM983_18270	COG1846	Transcriptional regulator
OM983_18315	COG2195	Cleaves the N-terminal amino acid of tripeptides
OM983_18330	COG1595	DNA-templated transcription, initiation
OM983_18350	COG2367	Beta-lactamase
OM983_18355	COG0671	phosphoesterase, PA-phosphatase related
OM983_18360	COG1609	Transcriptional regulator
OM983_18365	COG2814	Major facilitator Superfamily
OM983_18370	COG0673	inositol 2-dehydrogenase activity
OM983_18380	COG1012	belongs to the aldehyde dehydrogenase family
OM983_18395	COG0191	fructose-bisphosphate aldolase activity
OM983_18400	COG3718	enzyme involved in inositol metabolism
OM983_18425	COG0457	Tetratricopeptide repeat
OM983_18430	COG1476	TRANSCRIPTIONal
OM983_18445	COG1876	peptidase activity
OM983_18465	COG1309	transcriptional regulator
OM983_18470	COG0488	(ABC) transporter
OM983_18485	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
OM983_18500	COG1252	NADH dehydrogenase
OM983_18505	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
OM983_18520	COG1131	(ABC) transporter
OM983_18530	COG1309	transcriptional regulator
OM983_18545	COG1960	acyl-CoA dehydrogenase activity
OM983_18550	COG0439	Biotin carboxylase
OM983_18555	COG0511	ligase activity, forming carbon-carbon bonds
OM983_18560	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
OM983_18565	COG1024	Enoyl-CoA hydratase
OM983_18570	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
OM983_18575	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
OM983_18585	COG1247	-acetyltransferase
OM983_18590	COG0572	uridine kinase
OM983_18600	COG2318	DinB family
OM983_18630	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
OM983_18670	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
OM983_18670	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
OM983_18695	COG2814	Major facilitator Superfamily
OM983_18715	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
OM983_18735	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
OM983_18750	COG1063	alcohol dehydrogenase
OM983_18765	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
OM983_18770	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
OM983_18785	COG3773	Cell wall hydrolase
OM983_18795	COG0745	RESPONSE REGULATOR receiver
OM983_18825	COG1136	(ABC) transporter
OM983_18850	COG0460	homoserine dehydrogenase
OM983_18855	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
OM983_18865	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
OM983_18935	COG2124	cytochrome p450
OM983_18970	COG0561	phosphatase activity
OM983_18980	COG0768	penicillin binding
OM983_18985	COG1819	glycosyl
OM983_18990	COG1794	racemase activity, acting on amino acids and derivatives
OM983_19000	COG1122	ATPase activity
OM983_19015	COG2205	protein histidine kinase activity
OM983_19025	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
OM983_19030	COG0604	alcohol dehydrogenase
OM983_19035	COG0768	penicillin binding
OM983_19045	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
OM983_19080	COG0693	protein deglycase activity
OM983_19110	COG2814	Major facilitator Superfamily
OM983_19125	COG0584	glycerophosphoryl diester phosphodiesterase
OM983_19145	COG0697	spore germination
OM983_19175	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
OM983_19185	COG2223	nitrite transmembrane transporter activity
OM983_19200	COG2816	NAD+ diphosphatase activity
OM983_19205	COG0592	DNA-directed DNA polymerase activity
OM983_19210	COG1051	belongs to the nudix hydrolase family
OM983_19245	COG3878	Protein conserved in bacteria
OM983_19295	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
OM983_19310	COG0322	excinuclease ABC activity
OM983_19350	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
OM983_19375	COG1011	Hydrolase
OM983_19395	COG0076	glutamate decarboxylase activity
OM983_19410	COG1523	belongs to the glycosyl hydrolase 13 family
OM983_19415	COG3227	Zinc metalloprotease (Elastase)
OM983_19435	COG0201	protein transport
OM983_19445	COG0697	spore germination
OM983_19450	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
OM983_19480	COG4129	membrane
OM983_19485	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
OM983_19500	COG2959	enzyme of heme biosynthesis
OM983_19520	COG3483	tryptophan 2,3-dioxygenase activity
OM983_19525	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
OM983_19530	COG3844	kynureninase activity
OM983_19535	COG1309	transcriptional regulator
OM983_19565	COG3284	Transcriptional regulator
OM983_19585	COG1349	DNA-binding transcription factor activity
OM983_19605	COG1959	2 iron, 2 sulfur cluster binding
OM983_19620	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
OM983_19625	COG0508	dehydrogenase complex catalyzes the overall conversion of
OM983_19630	COG0022	dehydrogenase e1 component
OM983_19635	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
OM983_19645	COG1028	Short-chain dehydrogenase reductase Sdr
OM983_19650	COG0456	acetyltransferase
OM983_19650	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
OM983_19680	COG4176	ABC-type proline glycine betaine transport system permease component
OM983_19685	COG4175	Glycine betaine
OM983_19685	COG0517	IMP dehydrogenase activity
OM983_19710	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
OM983_19715	COG2153	protein acetylation
OM983_19720	COG3397	chitin binding
OM983_19735	COG2205	protein histidine kinase activity
OM983_19765	COG0658	competence protein
OM983_19765	COG2333	competence protein COMEC
OM983_19815	COG3973	AAA domain
OM983_19830	COG2105	PFAM AIG2 family protein
OM983_19835	COG0514	ATP-dependent DNA helicase (RecQ)
OM983_19855	COG4637	Psort location Cytoplasmic, score
OM983_19880	COG3397	chitin binding
OM983_19895	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
OM983_19900	COG1115	amino acid carrier protein
OM983_19905	COG1012	belongs to the aldehyde dehydrogenase family
OM983_19910	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
OM983_19920	COG3938	Belongs to the proline racemase family
OM983_19925	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
OM983_19965	COG0586	Pfam SNARE associated Golgi protein
OM983_19980	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
OM983_19985	COG0519	Catalyzes the synthesis of GMP from XMP
OM983_19990	COG4166	transmembrane transport
OM983_20000	COG4948	Mandelate Racemase Muconate Lactonizing
OM983_20045	COG2936	dipeptidyl-peptidase activity
OM983_20050	COG5002	protein histidine kinase activity
OM983_20100	COG1307	EDD domain protein, DegV family
OM983_20120	COG2814	Major facilitator Superfamily
OM983_20130	COG1664	Polymer-forming cytoskeletal
OM983_20135	COG0789	Transcriptional regulator
OM983_20140	COG4533	DNA binding
OM983_20145	COG0477	Major facilitator Superfamily
OM983_20145	COG2814	Major facilitator Superfamily
OM983_20165	COG2261	transglycosylase associated protein
OM983_20180	COG2226	methyltransferase
OM983_20215	COG0436	Aminotransferase
OM983_20220	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
OM983_20225	COG5146	pantothenate kinase activity
OM983_20290	COG0628	permease
OM983_20305	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
OM983_20310	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
OM983_20315	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
OM983_20320	COG1116	anion transmembrane transporter activity
OM983_20340	COG2816	NAD+ diphosphatase activity
OM983_20360	COG2746	aminoglycoside 3-N-acetyltransferase activity
OM983_20385	COG0697	spore germination
OM983_20390	COG2318	DinB family
OM983_20410	COG4912	Dna alkylation repair
OM983_20430	COG0861	Integral membrane protein TerC family
OM983_20435	COG1368	sulfuric ester hydrolase activity
OM983_20440	COG0488	(ABC) transporter
OM983_20455	COG1309	transcriptional regulator
OM983_20470	COG0287	Prephenate dehydrogenase
OM983_20475	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
OM983_20480	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
OM983_20485	COG1605	Chorismate mutase
OM983_20485	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
OM983_20520	COG3584	3D domain protein
OM983_20520	COG1388	LysM domain
OM983_20530	COG1595	DNA-templated transcription, initiation
OM983_20555	COG1879	ABC-type sugar transport system periplasmic component
OM983_20565	COG1172	Belongs to the binding-protein-dependent transport system permease family
OM983_20575	COG2390	Transcriptional regulator
OM983_20610	COG2329	Antibiotic biosynthesis monooxygenase
OM983_20630	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
OM983_20640	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
OM983_20645	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
OM983_20650	COG4187	Peptidase family M20/M25/M40
OM983_20655	COG1414	Transcriptional regulator
OM983_20660	COG0833	amino acid
OM983_20665	COG1690	Belongs to the RtcB family
OM983_20675	COG1785	Belongs to the alkaline phosphatase family
OM983_20685	COG3655	Transcriptional regulator
OM983_20700	COG4377	Putative membrane peptidase family (DUF2324)
OM983_20710	COG3279	Response regulator of the LytR AlgR family
OM983_20720	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
OM983_20725	COG0346	lactoylglutathione lyase activity
OM983_20745	COG0714	Associated with various cellular activities
OM983_20770	COG0463	Glycosyl transferase, family 2
OM983_20790	COG0463	Glycosyl transferase, family 2
OM983_20800	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
OM983_20805	COG0753	catalase activity
OM983_20815	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
OM983_20840	COG0714	Associated with various cellular activities
OM983_20850	COG0778	Nitroreductase
OM983_20855	COG1846	Transcriptional regulator
OM983_20890	COG1725	Transcriptional regulator
OM983_20900	COG0577	efflux transmembrane transporter activity
OM983_20900	COG1136	(ABC) transporter
OM983_20925	COG2207	Transcriptional regulator
OM983_20930	COG0456	acetyltransferase
OM983_20950	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
OM983_20970	COG0642	Histidine kinase
OM983_20975	COG0745	RESPONSE REGULATOR receiver
OM983_20980	COG0596	Alpha beta hydrolase
OM983_21010	COG0730	response to heat
OM983_21020	COG0833	amino acid
OM983_21030	COG4335	DNA alkylation repair
OM983_21070	COG0768	penicillin binding
OM983_21080	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
OM983_21115	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
OM983_21120	COG1414	Transcriptional regulator
OM983_21135	COG0860	N-Acetylmuramoyl-L-alanine amidase
OM983_21140	COG0640	Transcriptional regulator
OM983_21150	COG1960	acyl-CoA dehydrogenase activity
OM983_21165	COG3314	Sporulation integral membrane protein YlbJ
OM983_21180	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
OM983_21195	COG0574	Belongs to the PEP-utilizing enzyme family
OM983_21195	COG3848	Pyruvate phosphate dikinase
OM983_21200	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OM983_21215	COG5577	PFAM Coat F domain
OM983_21220	COG3403	YqcI/YcgG family
OM983_21225	COG1280	lysine exporter protein (LysE YggA)
OM983_21260	COG1063	alcohol dehydrogenase
OM983_21275	COG1027	Aspartate ammonia-lyase
OM983_21280	COG0252	asparaginase activity
OM983_21285	COG1396	sequence-specific DNA binding
OM983_21295	COG0322	excinuclease ABC activity
OM983_21300	COG0531	amino acid
OM983_21305	COG1114	Component of the transport system for branched-chain amino acids
OM983_21310	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
OM983_21320	COG0281	malic enzyme
OM983_21335	COG0531	amino acid
OM983_21345	COG0784	Response regulator, receiver
OM983_21355	COG2066	Belongs to the glutaminase family
OM983_21390	COG0737	Belongs to the 5'-nucleotidase family
OM983_21395	COG0753	catalase activity
OM983_21400	COG2267	carboxylic ester hydrolase activity
OM983_21405	COG1335	isochorismatase
OM983_21425	COG0583	DNA-binding transcription factor activity
OM983_21480	COG0288	reversible hydration of carbon dioxide
OM983_21490	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
OM983_21495	COG5609	conserved protein (DUF2294)
OM983_21510	COG1575	Belongs to the MenA family. Type 1 subfamily
OM983_21515	COG2267	carboxylic ester hydrolase activity
OM983_21520	COG0803	Belongs to the bacterial solute-binding protein 9 family
OM983_21525	COG1108	ABC-type Mn2 Zn2 transport systems permease components
OM983_21530	COG1121	(ABC) transporter
OM983_21560	COG0798	PFAM Bile acid sodium symporter
OM983_21565	COG0346	lactoylglutathione lyase activity
OM983_21570	COG0640	Transcriptional regulator
OM983_21585	COG0443	Heat shock 70 kDa protein
OM983_21600	COG1522	sequence-specific DNA binding
OM983_21615	COG0346	lactoylglutathione lyase activity
OM983_21635	COG2169	Transcriptional regulator
OM983_21640	COG2169	Transcriptional regulator
OM983_21685	COG2814	Major facilitator Superfamily
OM983_21710	COG0745	RESPONSE REGULATOR receiver
OM983_21715	COG5002	protein histidine kinase activity
OM983_21715	COG3850	Histidine kinase
OM983_21740	COG2515	1-aminocyclopropane-1-carboxylate deaminase
OM983_21760	COG1476	TRANSCRIPTIONal
OM983_21775	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OM983_21780	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
OM983_21790	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
OM983_21795	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
OM983_21810	COG1136	(ABC) transporter
OM983_21815	COG0577	efflux transmembrane transporter activity
OM983_21830	COG3850	Histidine kinase
OM983_21830	COG5002	protein histidine kinase activity
OM983_21840	COG2364	Membrane
OM983_21845	COG1846	Transcriptional regulator
OM983_21855	COG2808	Putative FMN-binding domain
OM983_21860	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
OM983_21865	COG2271	Major facilitator Superfamily
OM983_21870	COG1556	Lactate utilization protein
OM983_21875	COG1139	Iron-sulfur cluster binding protein
OM983_21885	COG0583	DNA-binding transcription factor activity
OM983_21895	COG1619	proteins homologs of microcin C7 resistance protein MccF
OM983_21915	COG0738	Major facilitator superfamily
OM983_21920	COG0673	inositol 2-dehydrogenase activity
OM983_21925	COG0561	phosphatase activity
OM983_21940	COG0457	Tetratricopeptide repeat
OM983_21960	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
OM983_21990	COG0534	Mate efflux family protein
OM983_22010	COG2814	Major facilitator Superfamily
OM983_22015	COG1309	transcriptional regulator
OM983_22030	COG0814	amino acid
OM983_22035	COG1760	l-serine dehydratase
OM983_22040	COG1760	l-serine dehydratase
OM983_22050	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
OM983_22055	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
OM983_22065	COG1335	isochorismatase
OM983_22070	COG1522	sequence-specific DNA binding
OM983_22075	COG0531	amino acid
OM983_22095	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
OM983_22115	COG1595	DNA-templated transcription, initiation
OM983_22130	COG0662	Cupin 2, conserved barrel domain protein
OM983_22135	COG2207	Transcriptional regulator
OM983_22135	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
OM983_22185	COG0477	Major facilitator Superfamily
OM983_22195	COG1846	Transcriptional regulator
OM983_22200	COG2814	Major facilitator Superfamily
OM983_22210	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
OM983_22215	COG1131	(ABC) transporter
OM983_22235	COG2076	Multidrug Resistance protein
OM983_22240	COG1309	transcriptional regulator
OM983_22250	COG2031	fatty acid transporter
OM983_22260	COG2249	NAD(P)H dehydrogenase (quinone) activity
OM983_22290	COG1122	ATPase activity
OM983_22295	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
OM983_22310	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
OM983_22315	COG1288	antiporter activity
OM983_22320	COG2356	endonuclease I
OM983_22335	COG3620	sequence-specific DNA binding
OM983_22340	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
OM983_22345	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
OM983_22350	COG0124	histidyl-tRNA synthetase
OM983_22365	COG1733	regulation of RNA biosynthetic process
OM983_22370	COG0778	Nitroreductase
OM983_22390	COG1028	Short-chain dehydrogenase reductase Sdr
OM983_22400	COG1131	(ABC) transporter
OM983_22425	COG1011	Hydrolase
OM983_22435	COG2365	Tyrosine phosphatase family
OM983_22460	COG0346	lactoylglutathione lyase activity
OM983_22465	COG1940	carbohydrate kinase activity
OM983_22470	COG0738	Major facilitator superfamily
OM983_22475	COG0110	maltose O-acetyltransferase activity
OM983_22485	COG1136	(ABC) transporter
OM983_22485	COG0577	efflux transmembrane transporter activity
OM983_22500	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
OM983_22505	COG0628	permease
OM983_22525	COG2226	methyltransferase
OM983_22535	COG0477	Major facilitator Superfamily
OM983_22565	COG1253	flavin adenine dinucleotide binding
OM983_22570	COG0789	Transcriptional regulator
OM983_22575	COG0697	spore germination
OM983_22580	COG1357	PFAM Pentapeptide repeats (8 copies)
OM983_22585	COG3813	Protein conserved in bacteria
OM983_22590	COG2706	6-phosphogluconolactonase activity
OM983_22595	COG1070	Carbohydrate kinase
OM983_22605	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
OM983_22610	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
OM983_22620	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
OM983_22625	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
OM983_22630	COG0604	alcohol dehydrogenase
OM983_22635	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
OM983_22645	COG0604	alcohol dehydrogenase
OM983_22645	COG3321	synthase
OM983_22650	COG1028	Short-chain dehydrogenase reductase Sdr
OM983_22675	COG0656	L-ascorbic acid biosynthetic process
OM983_22680	COG2814	Major facilitator Superfamily
OM983_22695	COG0346	lactoylglutathione lyase activity
OM983_22700	COG0814	amino acid
OM983_22725	COG1393	Belongs to the ArsC family
OM983_22730	COG1733	regulation of RNA biosynthetic process
OM983_22735	COG2188	Transcriptional regulator
OM983_22745	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
OM983_22750	COG1733	regulation of RNA biosynthetic process
OM983_22755	COG1733	regulation of RNA biosynthetic process
OM983_22770	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OM983_22790	COG0384	phenazine biosynthesis protein PhzF
OM983_22800	COG1028	Short-chain dehydrogenase reductase Sdr
OM983_22810	COG0318	PFAM AMP-dependent synthetase and ligase
OM983_22820	COG1733	regulation of RNA biosynthetic process
OM983_22850	COG1191	sigma factor activity
OM983_22865	COG1309	transcriptional regulator
OM983_22885	COG3152	Membrane
OM983_22910	COG1151	hydroxylamine reductase activity
OM983_22920	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OM983_22925	COG3757	hydrolase, family 25
OM983_22925	COG3409	Peptidoglycan-binding domain 1 protein
OM983_22960	COG2072	flavoprotein involved in K transport
OM983_23000	COG1113	amino acid transport
OM983_23005	COG2814	Major facilitator Superfamily
OM983_23035	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
OM983_23040	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
OM983_23065	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OM983_23070	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OM983_23075	COG3739	integral membrane protein
OM983_23080	COG0384	phenazine biosynthesis protein PhzF
OM983_23110	COG0583	DNA-binding transcription factor activity
OM983_23130	COG1193	negative regulation of DNA recombination
OM983_23150	COG1164	Oligoendopeptidase f
OM983_23155	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
OM983_23185	COG0584	glycerophosphoryl diester phosphodiesterase
OM983_23210	COG0640	Transcriptional regulator
OM983_23215	COG0604	alcohol dehydrogenase
OM983_23235	COG2808	Putative FMN-binding domain
OM983_23240	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
OM983_23250	COG0385	Bile acid
OM983_23255	COG0277	FAD linked oxidase domain protein
OM983_23285	COG1216	Glycosyl transferase, family 2
OM983_23290	COG1024	Enoyl-CoA hydratase
OM983_23300	COG1285	pathogenesis
OM983_23315	COG2514	catechol 2,3-dioxygenase activity
OM983_23320	COG2720	vancomycin resistance protein
OM983_23360	COG0716	FMN binding
OM983_23390	COG1028	Short-chain dehydrogenase reductase Sdr
OM983_23400	COG0165	Argininosuccinate lyase
OM983_23415	COG4145	pantothenate transmembrane transporter activity
OM983_23425	COG1012	belongs to the aldehyde dehydrogenase family
OM983_23430	COG1028	Short-chain dehydrogenase reductase Sdr
OM983_23440	COG1657	PFAM Prenyltransferase squalene oxidase
OM983_23445	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
OM983_23450	COG2962	Rard protein
OM983_23455	COG3326	Membrane
OM983_23470	COG0489	protein tyrosine kinase activity
OM983_23480	COG0314	molybdopterin synthase activity
OM983_23485	COG0303	'Molybdopterin
OM983_23490	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
OM983_23495	COG2116	formate transmembrane transporter activity
OM983_23505	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
OM983_23510	COG5609	conserved protein (DUF2294)
OM983_23515	COG2427	Protein of unknown function (DUF1641)
OM983_23520	COG3383	formate dehydrogenase (NAD+) activity
OM983_23530	COG0697	spore germination
OM983_23570	COG2226	methyltransferase
OM983_23575	COG4166	transmembrane transport
OM983_23580	COG4166	transmembrane transport
OM983_23585	COG4166	transmembrane transport
OM983_23590	COG1301	dicarboxylic acid transport
OM983_23595	COG1316	TRANSCRIPTIONal
OM983_23605	COG1595	DNA-templated transcription, initiation
OM983_23620	COG1131	(ABC) transporter
OM983_23630	COG0673	inositol 2-dehydrogenase activity
OM983_23635	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
OM983_23640	COG0187	DNA topoisomerase II activity
OM983_23645	COG1832	CoA-binding protein
OM983_23650	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
OM983_23655	COG0745	RESPONSE REGULATOR receiver
OM983_23670	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
OM983_23675	COG4841	protein insertion into membrane
OM983_23680	COG0824	Thioesterase
OM983_23710	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
OM983_23720	COG2274	protein secretion by the type I secretion system
OM983_23725	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
OM983_23765	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
OM983_23780	COG0183	Belongs to the thiolase family
OM983_23785	COG0318	PFAM AMP-dependent synthetase and ligase
OM983_23790	COG1268	BioY protein
OM983_23795	COG0318	PFAM AMP-dependent synthetase and ligase
OM983_23845	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
OM983_23855	COG5002	protein histidine kinase activity
OM983_23860	COG0400	carboxylic ester hydrolase activity
OM983_23865	COG0346	lactoylglutathione lyase activity
OM983_23870	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
OM983_23875	COG0069	glutamate synthase activity
OM983_23880	COG1902	pentaerythritol trinitrate reductase activity
OM983_23885	COG1329	Transcriptional regulator
OM983_23890	COG0010	Belongs to the arginase family
OM983_23915	COG2226	methyltransferase
OM983_23950	COG4846	Membrane protein involved in cytochrome C biogenesis
OM983_23955	COG0785	Cytochrome C biogenesis protein
OM983_23965	COG0583	DNA-binding transcription factor activity
OM983_23970	COG1380	Effector of murein hydrolase LrgA
OM983_23975	COG1346	cytolysis
OM983_24000	COG5632	N-Acetylmuramoyl-L-alanine amidase
OM983_24000	COG3409	Peptidoglycan-binding domain 1 protein
OM983_24015	COG1132	(ABC) transporter
OM983_24020	COG1132	(ABC) transporter
OM983_24050	COG3639	organic phosphonate transmembrane transporter activity
OM983_24055	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
OM983_24075	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
OM983_24095	COG1695	Transcriptional regulator
OM983_24140	COG5632	N-Acetylmuramoyl-L-alanine amidase
OM983_24140	COG1388	LysM domain
OM983_24140	COG3409	Peptidoglycan-binding domain 1 protein
OM983_24145	COG4824	toxin secretion phage lysis holin
OM983_24305	COG1595	DNA-templated transcription, initiation
OM983_24350	COG1351	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NAD(P)H and FADH(2) as the reductant
OM983_24430	COG1396	sequence-specific DNA binding
OM983_24455	COG0174	glutamine synthetase
OM983_24460	COG0789	Transcriptional regulator
OM983_24465	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
OM983_24475	COG2860	membrane
OM983_24480	COG0464	growth
OM983_24510	COG1388	LysM domain
OM983_24510	COG3584	3D domain protein
OM983_24515	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
OM983_24515	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
OM983_24515	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
OM983_24520	COG1105	Belongs to the carbohydrate kinase PfkB family
OM983_24525	COG1349	DNA-binding transcription factor activity
OM983_24535	COG2322	membrane
OM983_24545	COG1113	amino acid transport
OM983_24560	COG1408	metallophosphoesterase
OM983_24565	COG2116	formate transmembrane transporter activity
OM983_24575	COG2217	Heavy metal translocating P-type atpase
OM983_24580	COG2608	mercury ion transmembrane transporter activity
OM983_24585	COG1937	Protein conserved in bacteria
OM983_24595	COG2819	hydrolase of the alpha beta superfamily
OM983_24600	COG1120	ATPase activity
OM983_24605	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OM983_24610	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OM983_24620	COG0708	Exodeoxyribonuclease III
OM983_24625	COG2169	Transcriptional regulator
OM983_24630	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
OM983_24635	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
OM983_24645	COG2364	Membrane
OM983_24660	COG2267	carboxylic ester hydrolase activity
OM983_24665	COG0346	lactoylglutathione lyase activity
OM983_24670	COG5001	Diguanylate cyclase
OM983_24670	COG3300	MHYT domain
OM983_24685	COG1346	cytolysis
OM983_24690	COG1380	Effector of murein hydrolase LrgA
OM983_24695	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
OM983_24700	COG0508	dehydrogenase complex catalyzes the overall conversion of
OM983_24700	COG0596	Alpha beta hydrolase
OM983_24705	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
OM983_24725	COG1404	Belongs to the peptidase S8 family
OM983_24730	COG3773	Cell wall hydrolase
OM983_24735	COG0562	UDP-galactopyranose mutase
OM983_24740	COG1368	sulfuric ester hydrolase activity
OM983_24745	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
OM983_24755	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
OM983_24780	COG1131	(ABC) transporter
OM983_24800	COG4550	Control of competence regulator ComK, YlbF/YmcA
OM983_24805	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
OM983_24810	COG1013	pyruvate-flavodoxin oxidoreductase activity
OM983_24815	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
OM983_24815	COG0674	pyruvate-flavodoxin oxidoreductase activity
OM983_24825	COG2359	stage V sporulation protein S
OM983_24830	COG1692	metallophosphoesterase
OM983_24855	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
OM983_24860	COG1426	Protein conserved in bacteria
OM983_24875	COG0300	oxidoreductase activity
OM983_24880	COG0612	Peptidase, M16
OM983_24885	COG0612	Peptidase, M16
OM983_24900	COG3845	ABC transporter
OM983_24905	COG1744	ABC transporter substrate-binding protein PnrA-like
OM983_24910	COG2188	Transcriptional regulator
OM983_24915	COG1674	ftsk spoiiie
OM983_24925	COG0740	serine-type endopeptidase activity
OM983_24930	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
OM983_24940	COG0527	aspartate kinase activity
OM983_24945	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
OM983_24950	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
OM983_24955	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
OM983_24960	COG1873	PFAM PRC-barrel domain
OM983_24965	COG0612	Peptidase, M16
OM983_24970	COG0726	polysaccharide deacetylase
OM983_24985	COG0196	riboflavin kinase activity
OM983_24990	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
OM983_25000	COG1550	Protein conserved in bacteria
OM983_25010	COG1358	cellular component organization or biogenesis
OM983_25015	COG2740	Nucleic-acid-binding protein implicated in transcription termination
OM983_25020	COG0195	Participates in both transcription termination and antitermination
OM983_25040	COG0750	zinc metalloprotease
OM983_25050	COG4589	Belongs to the CDS family
OM983_25055	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
OM983_25065	COG0528	UMP kinase activity
OM983_25095	COG4974	Belongs to the 'phage' integrase family
OM983_25105	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
OM983_25115	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
OM983_25155	COG1837	Belongs to the UPF0109 family
OM983_25165	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
OM983_25175	COG0552	protein localization to endoplasmic reticulum
OM983_25190	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
OM983_25195	COG1028	Short-chain dehydrogenase reductase Sdr
OM983_25200	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
OM983_25215	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
OM983_25220	COG1461	Dihydroxyacetone kinase
OM983_25225	COG1302	Protein conserved in bacteria
OM983_25240	COG1564	THIamine pyrophosphokinase
OM983_25245	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
OM983_25250	COG1162	GTPase activity
OM983_25255	COG0515	serine threonine protein kinase
OM983_25255	COG2815	serine threonine protein kinase
OM983_25260	COG0631	protein serine/threonine phosphatase activity
OM983_25270	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
OM983_25270	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
OM983_25280	COG0242	peptide deformylase activity
OM983_25285	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
OM983_25290	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
OM983_25310	COG1561	YicC-like family, N-terminal region
OM983_25315	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
OM983_25325	COG0006	proline dipeptidase activity
OM983_25340	COG3069	C4-dicarboxylate transmembrane transporter activity
OM983_25405	COG0564	pseudouridine synthase activity
OM983_25425	COG3599	regulation of cell shape
OM983_25430	COG2302	S4 RNA-binding domain
OM983_25435	COG0762	integral membrane protein
OM983_25445	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
OM983_25450	COG1496	oxidoreductase activity
OM983_25455	COG1873	PFAM PRC-barrel domain
OM983_25460	COG1191	sigma factor activity
OM983_25465	COG1191	sigma factor activity
OM983_25475	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
OM983_25480	COG0849	cell division
OM983_25485	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
OM983_25490	COG0812	UDP-N-acetylmuramate dehydrogenase activity
OM983_25500	COG0772	Belongs to the SEDS family
OM983_25515	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
OM983_25520	COG0768	penicillin binding
OM983_25525	COG0768	penicillin binding
OM983_25530	COG4839	cell division protein FtsL
OM983_25545	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
OM983_25560	COG0333	Belongs to the bacterial ribosomal protein bL32 family
OM983_25565	COG1399	metal-binding, possibly nucleic acid-binding protein
OM983_25615	COG4824	toxin secretion phage lysis holin
OM983_25715	COG1802	Transcriptional regulator
OM983_25715	COG4626	Terminase
OM983_25740	COG0582	viral genome integration into host DNA
OM983_25805	COG0756	dUTP diphosphatase activity
OM983_25820	COG1191	sigma factor activity
OM983_25845	COG1484	DNA-dependent DNA replication
OM983_25875	COG1396	sequence-specific DNA binding
OM983_25890	COG1396	sequence-specific DNA binding
OM983_25910	COG0582	viral genome integration into host DNA
OM983_25920	COG3480	Lon protease (S16) C-terminal proteolytic domain
OM983_25925	COG1752	Esterase of the alpha-beta hydrolase superfamily
OM983_25930	COG3314	Sporulation integral membrane protein YlbJ
OM983_25940	COG0742	ribosomal rna small subunit methyltransferase
OM983_25955	COG3679	Belongs to the UPF0342 family
OM983_25960	COG0406	alpha-ribazole phosphatase activity
OM983_25975	COG2340	Cysteine-rich secretory protein family
OM983_25990	COG3336	cytochrome c oxidase
OM983_26025	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
OM983_26030	COG0772	Belongs to the SEDS family
OM983_26040	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
OM983_26045	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
OM983_26055	COG4896	Protein conserved in bacteria
OM983_26070	COG1217	gtp-binding protein TYPA
OM983_26080	COG0483	inositol monophosphate 1-phosphatase activity
OM983_26100	COG1982	Orn Lys Arg decarboxylase major
OM983_26145	COG0508	dehydrogenase complex catalyzes the overall conversion of
OM983_26150	COG0022	dehydrogenase e1 component
OM983_26155	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
OM983_26165	COG0242	peptide deformylase activity
OM983_26170	COG0561	phosphatase activity
OM983_26180	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
OM983_26185	COG0569	domain protein
OM983_26205	COG0583	DNA-binding transcription factor activity
OM983_26210	COG0517	IMP dehydrogenase activity
OM983_26220	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
OM983_26230	COG4703	Protein of unknown function (DUF1797)
OM983_26245	COG2200	EAL domain
OM983_26250	COG1028	Short-chain dehydrogenase reductase Sdr
OM983_26255	COG1408	metallophosphoesterase
OM983_26265	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
OM983_26300	COG2814	Major facilitator Superfamily
OM983_26320	COG3209	COG3209 Rhs family protein
OM983_26330	COG2205	protein histidine kinase activity
OM983_26340	COG0436	Aminotransferase
OM983_26345	COG1609	Transcriptional regulator
OM983_26350	COG3833	ABC-type maltose transport systems, permease component
OM983_26355	COG1175	transmembrane transport
OM983_26360	COG2182	Extracellular solute-binding protein
OM983_26370	COG0366	Alpha amylase catalytic
OM983_26375	COG3842	ATPase activity
OM983_26415	COG0183	Belongs to the thiolase family
OM983_26450	COG1695	Transcriptional regulator
OM983_26455	COG1028	Short-chain dehydrogenase reductase Sdr
OM983_26465	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
OM983_26475	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
OM983_26480	COG0436	Aminotransferase
OM983_26500	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
OM983_26520	COG2199	diguanylate cyclase activity
OM983_26525	COG0778	Nitroreductase
OM983_26550	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
OM983_26550	COG2190	(PTS) system
OM983_26550	COG1263	PTS System
OM983_26555	COG3711	transcriptional antiterminator
OM983_26565	COG2188	Transcriptional regulator
OM983_26575	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
OM983_26600	COG1547	Domain of unknown function (DUF309)
OM983_26605	COG0456	acetyltransferase
OM983_26615	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
OM983_26620	COG4086	secreted protein
OM983_26625	COG0561	phosphatase activity
OM983_26630	COG0697	spore germination
OM983_26645	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
OM983_26670	COG0733	neurotransmitter:sodium symporter activity
OM983_26690	COG1686	Belongs to the peptidase S11 family
OM983_26695	COG1725	Transcriptional regulator
OM983_26700	COG1131	(ABC) transporter
OM983_26715	COG1846	Transcriptional regulator
OM983_26730	COG0598	Magnesium transport protein CorA
OM983_26755	COG4974	Belongs to the 'phage' integrase family
OM983_26765	COG0735	belongs to the Fur family
OM983_26770	COG1300	Membrane
OM983_26790	COG0667	Aldo Keto reductase
OM983_26795	COG0656	L-ascorbic acid biosynthetic process
OM983_26800	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
OM983_26800	COG0456	acetyltransferase
OM983_26810	COG1525	nuclease
OM983_26810	COG4085	toxin activity
OM983_26810	COG0737	Belongs to the 5'-nucleotidase family
OM983_26820	COG0596	Alpha beta hydrolase
OM983_26825	COG2056	Na+-H+ antiporter family
OM983_26830	COG1609	Transcriptional regulator
OM983_26835	COG0456	acetyltransferase
OM983_26840	COG1073	alpha beta
OM983_26855	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
OM983_26855	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
OM983_26860	COG0307	riboflavin synthase, alpha
OM983_26885	COG4106	trans-aconitate 2-methyltransferase activity
OM983_26890	COG1073	alpha beta
OM983_26890	COG2226	methyltransferase
OM983_26905	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
OM983_26915	COG1757	Na H antiporter
OM983_26920	COG0737	Belongs to the 5'-nucleotidase family
OM983_26930	COG1522	sequence-specific DNA binding
OM983_26950	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
OM983_26960	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
OM983_26975	COG0300	oxidoreductase activity
OM983_26985	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
OM983_26990	COG1760	l-serine dehydratase
OM983_26995	COG1760	l-serine dehydratase
OM983_27015	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
OM983_27025	COG2195	Cleaves the N-terminal amino acid of tripeptides
OM983_27030	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
OM983_27045	COG1376	ErfK ybiS ycfS ynhG family protein
OM983_27050	COG4129	membrane
OM983_27055	COG1126	abc transporter atp-binding protein
OM983_27060	COG0765	amino acid transport
OM983_27065	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
OM983_27080	COG2816	NAD+ diphosphatase activity
OM983_27085	COG0772	Belongs to the SEDS family
OM983_27090	COG0508	dehydrogenase complex catalyzes the overall conversion of
OM983_27095	COG0022	dehydrogenase e1 component
OM983_27100	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
OM983_27105	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
OM983_27120	COG0280	phosphate acetyltransferase
OM983_27125	COG3829	transcription factor binding
OM983_27125	COG3290	protein histidine kinase activity
OM983_27135	COG0584	glycerophosphoryl diester phosphodiesterase
OM983_27140	COG3093	addiction module antidote protein HigA
OM983_27150	COG0745	RESPONSE REGULATOR receiver
OM983_27155	COG0750	zinc metalloprotease
OM983_27160	COG0497	DNA recombination
OM983_27170	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
OM983_27180	COG0142	geranyltranstransferase activity
OM983_27205	COG1302	Protein conserved in bacteria
OM983_27210	COG0439	Biotin carboxylase
OM983_27215	COG0511	ligase activity, forming carbon-carbon bonds
OM983_27260	COG3854	ATPases associated with a variety of cellular activities
OM983_27285	COG0006	proline dipeptidase activity
OM983_27300	COG3872	metal-dependent enzyme
OM983_27310	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
OM983_27330	COG0095	Lipoate-protein ligase
OM983_27335	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
OM983_27340	COG1609	Transcriptional regulator
OM983_27350	COG2076	Multidrug Resistance protein
OM983_27355	COG2076	Multidrug Resistance protein
OM983_27390	COG1131	(ABC) transporter
OM983_27395	COG1725	Transcriptional regulator
OM983_27425	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
OM983_27485	COG4970	Tfp pilus assembly protein FimT
OM983_27495	COG1459	type II secretion system
OM983_27500	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
OM983_27550	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
OM983_27555	COG1410	methionine synthase
OM983_27555	COG0646	methionine synthase
OM983_27560	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
OM983_27560	COG0646	methionine synthase
OM983_27565	COG0626	cystathionine gamma-synthase activity
OM983_27570	COG0626	cystathionine gamma-synthase activity
OM983_27590	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OM983_27600	COG1940	carbohydrate kinase activity
OM983_27605	COG4483	Protein conserved in bacteria
OM983_27610	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
OM983_27615	COG0267	Belongs to the bacterial ribosomal protein bL33 family
OM983_27725	COG0457	Tetratricopeptide repeat
OM983_27750	COG4974	Belongs to the 'phage' integrase family
OM983_27760	COG3443	Belongs to the bacterial solute-binding protein 9 family
OM983_27825	COG4974	Belongs to the 'phage' integrase family
OM983_27835	COG2002	toxin-antitoxin pair type II binding
OM983_28005	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
OM983_28010	COG1210	Utp--glucose-1-phosphate uridylyltransferase
OM983_28030	COG0671	phosphoesterase, PA-phosphatase related
OM983_28035	COG4196	transglutaminase domain protein
OM983_28055	COG2311	Membrane
OM983_28190	COG4962	Type ii secretion system protein e
OM983_28395	COG3344	reverse transcriptase
OM983_28475	COG3344	reverse transcriptase
OM983_28580	COG0457	Tetratricopeptide repeat
OM983_28605	COG4974	Belongs to the 'phage' integrase family
OM983_28615	COG3443	Belongs to the bacterial solute-binding protein 9 family
OM983_28680	COG4974	Belongs to the 'phage' integrase family
OM983_28690	COG2002	toxin-antitoxin pair type II binding