locus-tag	class	description
FOC06_00010	COG0753	catalase activity
FOC06_00010	COG0693	protein deglycase activity
FOC06_00020	COG0531	amino acid
FOC06_00025	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
FOC06_00035	COG1012	belongs to the aldehyde dehydrogenase family
FOC06_00040	COG1132	(ABC) transporter
FOC06_00050	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC06_00055	COG0765	amino acid transport
FOC06_00060	COG1126	abc transporter atp-binding protein
FOC06_00075	COG0189	ligase activity
FOC06_00105	COG0028	Belongs to the TPP enzyme family
FOC06_00110	COG3527	Alpha-acetolactate decarboxylase
FOC06_00125	COG0561	phosphatase activity
FOC06_00140	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FOC06_00155	COG0659	secondary active sulfate transmembrane transporter activity
FOC06_00175	COG0653	protein targeting
FOC06_00180	COG2244	polysaccharide biosynthetic process
FOC06_00190	COG0860	N-Acetylmuramoyl-L-alanine amidase
FOC06_00195	COG4196	transglutaminase domain protein
FOC06_00210	COG1696	Membrane protein involved in D-alanine export
FOC06_00225	COG1024	Enoyl-CoA hydratase
FOC06_00245	COG1363	Peptidase, m42
FOC06_00265	COG3938	Belongs to the proline racemase family
FOC06_00300	COG0601	transmembrane transport
FOC06_00305	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC06_00315	COG4608	Belongs to the ABC transporter superfamily
FOC06_00320	COG0322	excinuclease ABC activity
FOC06_00350	COG0477	Major facilitator Superfamily
FOC06_00355	COG3290	protein histidine kinase activity
FOC06_00360	COG4565	transcriptional regulatory protein
FOC06_00365	COG3181	Tripartite tricarboxylate transporter family receptor
FOC06_00395	COG0789	Transcriptional regulator
FOC06_00395	COG4978	Transcriptional regulator
FOC06_00410	COG0305	Participates in initiation and elongation during chromosome replication
FOC06_00440	COG0477	Major facilitator Superfamily
FOC06_00485	COG3320	Male sterility
FOC06_00485	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FOC06_00510	COG1183	phosphatidylcholine synthase activity
FOC06_00530	COG2376	Dihydroxyacetone kinase
FOC06_00540	COG2376	Dihydroxyacetone kinase
FOC06_00545	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
FOC06_00550	COG1959	2 iron, 2 sulfur cluster binding
FOC06_00580	COG3437	response regulator, receiver
FOC06_00580	COG2770	Histidine kinase
FOC06_00630	COG3237	CsbD-like
FOC06_00655	COG1191	sigma factor activity
FOC06_00665	COG2208	phosphoserine phosphatase activity
FOC06_00670	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
FOC06_00675	COG0784	Response regulator, receiver
FOC06_00675	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC06_00675	COG2198	Histidine kinase
FOC06_00675	COG2205	protein histidine kinase activity
FOC06_00695	COG0393	Putative heavy-metal-binding
FOC06_00725	COG0420	3'-5' exonuclease activity
FOC06_00750	COG1309	transcriptional regulator
FOC06_00755	COG2814	Major facilitator Superfamily
FOC06_00760	COG0346	lactoylglutathione lyase activity
FOC06_00765	COG0346	lactoylglutathione lyase activity
FOC06_00775	COG2267	carboxylic ester hydrolase activity
FOC06_00795	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
FOC06_00800	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
FOC06_00810	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
FOC06_00845	COG0477	Major facilitator Superfamily
FOC06_00850	COG0477	Major facilitator Superfamily
FOC06_00860	COG3973	AAA domain
FOC06_00885	COG4980	gas vesicle protein
FOC06_00890	COG0537	adenosine 5'-monophosphoramidase activity
FOC06_00895	COG1131	(ABC) transporter
FOC06_00900	COG4473	ABC transporter
FOC06_00915	COG1309	transcriptional regulator
FOC06_00920	COG3402	PFAM membrane-flanked domain
FOC06_00965	COG3402	PFAM membrane-flanked domain
FOC06_00970	COG3428	Bacterial PH domain
FOC06_00975	COG2329	Antibiotic biosynthesis monooxygenase
FOC06_00980	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FOC06_00985	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
FOC06_01030	COG1309	transcriptional regulator
FOC06_01035	COG1511	domain protein
FOC06_01060	COG1609	Transcriptional regulator
FOC06_01070	COG1234	tRNA 3'-trailer cleavage
FOC06_01075	COG0095	Lipoate-protein ligase
FOC06_01085	COG0318	PFAM AMP-dependent synthetase and ligase
FOC06_01115	COG3209	COG3209 Rhs family protein
FOC06_01150	COG1078	dGTPase activity
FOC06_01160	COG1595	DNA-templated transcription, initiation
FOC06_01165	COG3708	Transcriptional regulator
FOC06_01165	COG2207	Transcriptional regulator
FOC06_01175	COG2205	protein histidine kinase activity
FOC06_01180	COG0745	RESPONSE REGULATOR receiver
FOC06_01205	COG0501	Belongs to the peptidase M48B family
FOC06_01210	COG0840	transmembrane signaling receptor activity
FOC06_01215	COG0697	spore germination
FOC06_01230	COG0497	DNA recombination
FOC06_01235	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
FOC06_01240	COG2224	Isocitrate lyase
FOC06_01250	COG1278	Cold shock
FOC06_01265	COG4903	ComK protein
FOC06_01270	COG0398	Pfam SNARE associated Golgi protein
FOC06_01280	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
FOC06_01285	COG1074	ATP-dependent DNA helicase activity
FOC06_01330	COG0179	Fumarylacetoacetate (FAA) hydrolase
FOC06_01355	COG0367	asparagine synthase
FOC06_01365	COG0753	catalase activity
FOC06_01390	COG2996	Protein conserved in bacteria
FOC06_01400	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FOC06_01410	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC06_01425	COG0561	phosphatase activity
FOC06_01435	COG0542	response to heat
FOC06_01445	COG2267	carboxylic ester hydrolase activity
FOC06_01460	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FOC06_01465	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FOC06_01470	COG5504	Zn-dependent protease
FOC06_01480	COG0180	Tryptophanyl-tRNA synthetase
FOC06_01490	COG4166	transmembrane transport
FOC06_01495	COG0601	transmembrane transport
FOC06_01500	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC06_01505	COG0444	Belongs to the ABC transporter superfamily
FOC06_01510	COG4608	Belongs to the ABC transporter superfamily
FOC06_01515	COG0534	Mate efflux family protein
FOC06_01520	COG4166	transmembrane transport
FOC06_01530	COG1393	Belongs to the ArsC family
FOC06_01535	COG0861	Integral membrane protein TerC family
FOC06_01540	COG4862	establishment of competence for transformation
FOC06_01545	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FOC06_01555	COG1164	Oligoendopeptidase f
FOC06_01565	COG2346	COG2346, Truncated hemoglobins
FOC06_01570	COG4116	CYTH
FOC06_01580	COG2357	RelA SpoT domain protein
FOC06_01585	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
FOC06_01590	COG0564	pseudouridine synthase activity
FOC06_01610	COG1216	Glycosyl transferase, family 2
FOC06_01630	COG0463	Glycosyl transferase, family 2
FOC06_01630	COG0457	Tetratricopeptide repeat
FOC06_01650	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
FOC06_01665	COG1091	dTDP-4-dehydrorhamnose reductase activity
FOC06_01710	COG2153	protein acetylation
FOC06_01715	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
FOC06_01720	COG2382	esterase
FOC06_01735	COG5492	domain, Protein
FOC06_01740	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FOC06_01750	COG0512	Glutamine amidotransferase of anthranilate synthase
FOC06_01750	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
FOC06_01785	COG1620	l-lactate permease
FOC06_01790	COG5634	Uncharacterized conserved protein (DUF2278)
FOC06_01845	COG0508	dehydrogenase complex catalyzes the overall conversion of
FOC06_01855	COG1476	TRANSCRIPTIONal
FOC06_01915	COG2226	methyltransferase
FOC06_01925	COG1686	Belongs to the peptidase S11 family
FOC06_01930	COG0681	Belongs to the peptidase S26 family
FOC06_01965	COG1012	belongs to the aldehyde dehydrogenase family
FOC06_01970	COG3842	ATPase activity
FOC06_01975	COG1176	ABC-type spermidine putrescine transport system, permease component I
FOC06_01980	COG1177	transmembrane transport
FOC06_01985	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
FOC06_01995	COG2409	Drug exporters of the RND superfamily
FOC06_02005	COG0564	pseudouridine synthase activity
FOC06_02015	COG2340	Cysteine-rich secretory protein family
FOC06_02020	COG0247	lactate metabolic process
FOC06_02025	COG0277	FAD linked oxidase domain protein
FOC06_02030	COG3835	regulator
FOC06_02040	COG0745	RESPONSE REGULATOR receiver
FOC06_02045	COG5002	protein histidine kinase activity
FOC06_02050	COG2186	Transcriptional regulator
FOC06_02070	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
FOC06_02080	COG2116	formate transmembrane transporter activity
FOC06_02085	COG0861	Integral membrane protein TerC family
FOC06_02090	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FOC06_02100	COG2030	dehydratase
FOC06_02120	COG1028	Short-chain dehydrogenase reductase Sdr
FOC06_02125	COG3243	poly(R)-hydroxyalkanoic acid synthase
FOC06_02135	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FOC06_02145	COG1840	ABC-type Fe3 transport system, periplasmic component
FOC06_02160	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FOC06_02175	COG1349	DNA-binding transcription factor activity
FOC06_02195	COG2861	carbohydrate metabolic process
FOC06_02205	COG3852	Histidine kinase
FOC06_02210	COG1846	Transcriptional regulator
FOC06_02220	COG2318	DinB family
FOC06_02225	COG5002	protein histidine kinase activity
FOC06_02235	COG0720	synthase
FOC06_02250	COG4873	Protein conserved in bacteria
FOC06_02275	COG1780	Probably involved in ribonucleotide reductase function
FOC06_02295	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FOC06_02300	COG1725	Transcriptional regulator
FOC06_02305	COG1131	(ABC) transporter
FOC06_02315	COG1131	(ABC) transporter
FOC06_02320	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
FOC06_02335	COG1522	sequence-specific DNA binding
FOC06_02345	COG1335	isochorismatase
FOC06_02355	COG1619	proteins homologs of microcin C7 resistance protein MccF
FOC06_02360	COG2070	2-Nitropropane dioxygenase
FOC06_02365	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
FOC06_02375	COG1696	Membrane protein involved in D-alanine export
FOC06_02395	COG0716	FMN binding
FOC06_02405	COG3173	Aminoglycoside phosphotransferase
FOC06_02420	COG0534	Mate efflux family protein
FOC06_02425	COG1968	undecaprenyl-diphosphatase activity
FOC06_02440	COG1846	Transcriptional regulator
FOC06_02450	COG1301	dicarboxylic acid transport
FOC06_02455	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FOC06_02460	COG4709	membrane
FOC06_02465	COG3874	Sporulation protein YtfJ
FOC06_02490	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FOC06_02495	COG0028	Belongs to the TPP enzyme family
FOC06_02500	COG0440	acetolactate synthase activity
FOC06_02505	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
FOC06_02515	COG0473	3-isopropylmalate dehydrogenase activity
FOC06_02540	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
FOC06_02575	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
FOC06_02590	COG1183	phosphatidylcholine synthase activity
FOC06_02595	COG1368	sulfuric ester hydrolase activity
FOC06_02605	COG0019	diaminopimelate decarboxylase activity
FOC06_02625	COG0529	Catalyzes the synthesis of activated sulfate
FOC06_02630	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FOC06_02650	COG1648	precorrin-2 dehydrogenase activity
FOC06_02655	COG0733	neurotransmitter:sodium symporter activity
FOC06_02675	COG1757	Na H antiporter
FOC06_02690	COG4758	membrane
FOC06_02695	COG4585	Histidine kinase
FOC06_02700	COG2197	response regulator
FOC06_02710	COG1114	Component of the transport system for branched-chain amino acids
FOC06_02720	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FOC06_02745	COG1017	nitric oxide dioxygenase activity
FOC06_02745	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FOC06_02760	COG0730	response to heat
FOC06_02765	COG0306	phosphate transporter
FOC06_02770	COG1392	Phosphate transport regulator
FOC06_02775	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FOC06_02795	COG1801	Protein of unknown function DUF72
FOC06_02805	COG0582	viral genome integration into host DNA
FOC06_02810	COG5002	protein histidine kinase activity
FOC06_02830	COG0392	lysyltransferase activity
FOC06_02830	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
FOC06_02845	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FOC06_02850	COG1686	Belongs to the peptidase S11 family
FOC06_02855	COG2715	membrane protein required for spore maturation
FOC06_02860	COG0700	Nucleoside recognition
FOC06_02865	COG1187	pseudouridine synthase activity
FOC06_02875	COG1333	cytochrome c biogenesis protein
FOC06_02880	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FOC06_02885	COG0745	RESPONSE REGULATOR receiver
FOC06_02890	COG5002	protein histidine kinase activity
FOC06_02895	COG2096	Adenosyltransferase
FOC06_02910	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
FOC06_02915	COG1141	Ferredoxin
FOC06_02920	COG4955	Helix-turn-helix domain
FOC06_02925	COG0514	ATP-dependent DNA helicase (RecQ)
FOC06_02930	COG1266	CAAX protease self-immunity
FOC06_02950	COG4862	establishment of competence for transformation
FOC06_02955	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
FOC06_02975	COG0492	ferredoxin-NADP+ reductase activity
FOC06_03050	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
FOC06_03065	COG0142	geranyltranstransferase activity
FOC06_03075	COG0142	geranyltranstransferase activity
FOC06_03080	COG0105	UTP biosynthetic process
FOC06_03095	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
FOC06_03100	COG0457	Tetratricopeptide repeat
FOC06_03120	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
FOC06_03130	COG4347	Protein of unknown function (DUF1405)
FOC06_03145	COG2738	Putative neutral zinc metallopeptidase
FOC06_03155	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC06_03160	COG1694	Mazg nucleotide pyrophosphohydrolase
FOC06_03175	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
FOC06_03180	COG0438	transferase activity, transferring glycosyl groups
FOC06_03215	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FOC06_03215	COG1199	ATP-dependent helicase activity
FOC06_03235	COG3935	DnaD domain protein
FOC06_03240	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
FOC06_03250	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FOC06_03250	COG4499	WXG100 protein secretion system (Wss), protein YukC
FOC06_03290	COG4474	Belongs to the UPF0398 family
FOC06_03305	COG0116	Belongs to the methyltransferase superfamily
FOC06_03315	COG1199	ATP-dependent helicase activity
FOC06_03320	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
FOC06_03330	COG3173	Aminoglycoside phosphotransferase
FOC06_03335	COG0024	Methionine aminopeptidase
FOC06_03350	COG2233	PERMEase
FOC06_03355	COG2311	Membrane
FOC06_03365	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
FOC06_03375	COG0456	acetyltransferase
FOC06_03425	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FOC06_03450	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
FOC06_03465	COG1215	transferase activity, transferring glycosyl groups
FOC06_03485	COG0454	-acetyltransferase
FOC06_03505	COG0328	RNA-DNA hybrid ribonuclease activity
FOC06_03545	COG1280	lysine exporter protein (LysE YggA)
FOC06_03560	COG3162	membrane
FOC06_03565	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FOC06_03570	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FOC06_03580	COG0475	glutathione-regulated potassium exporter activity
FOC06_03590	COG0789	Transcriptional regulator
FOC06_03590	COG4978	Transcriptional regulator
FOC06_03600	COG2323	membrane
FOC06_03605	COG1434	Gram-negative-bacterium-type cell wall biogenesis
FOC06_03660	COG1923	regulation of RNA biosynthetic process
FOC06_03670	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
FOC06_03675	COG1360	Flagellar Motor Protein
FOC06_03680	COG2201	protein-glutamate methylesterase activity
FOC06_03690	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FOC06_03690	COG1776	CheC inhibitor of MCP methylation
FOC06_03705	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
FOC06_03725	COG1256	bacterial-type flagellum assembly
FOC06_03750	COG1815	bacterial-type flagellum-dependent cell motility
FOC06_03755	COG1558	bacterial-type flagellum-dependent cell motility
FOC06_03760	COG1677	Flagellar hook-basal body complex protein FliE
FOC06_03770	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FOC06_03780	COG1157	protein secretion by the type III secretion system
FOC06_03830	COG0463	Glycosyl transferase, family 2
FOC06_03870	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FOC06_03875	COG0741	lytic transglycosylase activity
FOC06_03890	COG1776	CheC inhibitor of MCP methylation
FOC06_03890	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FOC06_03900	COG1338	Plays a role in the flagellum-specific transport system
FOC06_03905	COG1987	bacterial-type flagellum assembly
FOC06_03915	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FOC06_03920	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FOC06_03930	COG4786	Flagellar basal body rod
FOC06_03935	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
FOC06_03960	COG1309	transcriptional regulator
FOC06_03980	COG2329	Antibiotic biosynthesis monooxygenase
FOC06_04010	COG3842	ATPase activity
FOC06_04015	COG0725	ABC transporter, periplasmic molybdate-binding protein
FOC06_04020	COG1177	transmembrane transport
FOC06_04025	COG1234	tRNA 3'-trailer cleavage
FOC06_04055	COG1686	Belongs to the peptidase S11 family
FOC06_04065	COG0406	alpha-ribazole phosphatase activity
FOC06_04095	COG0367	asparagine synthase
FOC06_04125	COG1802	Transcriptional regulator
FOC06_04130	COG0697	spore germination
FOC06_04135	COG0523	cobalamin synthesis protein
FOC06_04140	COG0701	Predicted permease
FOC06_04150	COG1216	Glycosyl transferase, family 2
FOC06_04150	COG0438	transferase activity, transferring glycosyl groups
FOC06_04155	COG1757	Na H antiporter
FOC06_04160	COG0114	fumarate hydratase activity
FOC06_04185	COG3340	Belongs to the peptidase S51 family
FOC06_04205	COG0785	Cytochrome C biogenesis protein
FOC06_04235	COG2733	membrane
FOC06_04270	COG1131	(ABC) transporter
FOC06_04285	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FOC06_04290	COG0528	UMP kinase activity
FOC06_04300	COG1027	Aspartate ammonia-lyase
FOC06_04305	COG0281	malic enzyme
FOC06_04310	COG4191	Histidine kinase
FOC06_04315	COG0784	Response regulator, receiver
FOC06_04320	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
FOC06_04370	COG1051	belongs to the nudix hydrolase family
FOC06_04375	COG0860	N-Acetylmuramoyl-L-alanine amidase
FOC06_04400	COG1966	Carbon starvation protein
FOC06_04415	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FOC06_04435	COG2223	nitrite transmembrane transporter activity
FOC06_04440	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FOC06_04455	COG2244	polysaccharide biosynthetic process
FOC06_04460	COG0733	neurotransmitter:sodium symporter activity
FOC06_04470	COG5566	PFAM Mor transcription activator
FOC06_04475	COG2323	membrane
FOC06_04490	COG2084	Dehydrogenase
FOC06_04505	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FOC06_04515	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FOC06_04520	COG0028	Belongs to the TPP enzyme family
FOC06_04525	COG0440	acetolactate synthase activity
FOC06_04530	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
FOC06_04540	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FOC06_04565	COG2814	Major facilitator Superfamily
FOC06_04570	COG3384	dioxygenase
FOC06_04580	COG3279	Response regulator of the LytR AlgR family
FOC06_04585	COG0427	acetyl-CoA hydrolase
FOC06_04605	COG1073	alpha beta
FOC06_04640	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC06_04660	COG1914	H( )-stimulated, divalent metal cation uptake system
FOC06_04675	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
FOC06_04705	COG2390	Transcriptional regulator
FOC06_04715	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FOC06_04720	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
FOC06_04735	COG4224	UPF0291 protein
FOC06_04755	COG0006	proline dipeptidase activity
FOC06_04760	COG2132	Multicopper oxidase
FOC06_04790	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
FOC06_04805	COG1276	copper resistance
FOC06_04805	COG2372	response to copper ion
FOC06_04810	COG4549	nuclear export factor GLE1
FOC06_04820	COG0697	spore germination
FOC06_04825	COG0583	DNA-binding transcription factor activity
FOC06_04830	COG1959	2 iron, 2 sulfur cluster binding
FOC06_04835	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
FOC06_04840	COG0778	Nitroreductase
FOC06_04850	COG0628	permease
FOC06_04855	COG0039	L-malate dehydrogenase activity
FOC06_04860	COG1231	oxidoreductase activity
FOC06_04865	COG0523	cobalamin synthesis protein
FOC06_04880	COG0318	PFAM AMP-dependent synthetase and ligase
FOC06_04885	COG2030	dehydratase
FOC06_04890	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FOC06_04900	COG0411	ABC transporter
FOC06_04920	COG0583	DNA-binding transcription factor activity
FOC06_04940	COG1846	Transcriptional regulator
FOC06_04950	COG1271	oxidase subunit
FOC06_04955	COG1294	oxidase, subunit
FOC06_04960	COG4988	ABC transporter
FOC06_04965	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
FOC06_04985	COG1686	Belongs to the peptidase S11 family
FOC06_05000	COG0791	NLP P60 protein
FOC06_05000	COG1388	LysM domain
FOC06_05015	COG0745	RESPONSE REGULATOR receiver
FOC06_05020	COG5002	protein histidine kinase activity
FOC06_05030	COG0300	oxidoreductase activity
FOC06_05045	COG0726	polysaccharide deacetylase
FOC06_05065	COG0460	homoserine dehydrogenase
FOC06_05090	COG1316	TRANSCRIPTIONal
FOC06_05100	COG0745	RESPONSE REGULATOR receiver
FOC06_05105	COG5002	protein histidine kinase activity
FOC06_05110	COG0726	polysaccharide deacetylase
FOC06_05120	COG1285	pathogenesis
FOC06_05125	COG1247	-acetyltransferase
FOC06_05135	COG4264	IucA IucC family
FOC06_05140	COG0318	PFAM AMP-dependent synthetase and ligase
FOC06_05155	COG1082	Xylose isomerase domain protein TIM barrel
FOC06_05170	COG1279	arginine transmembrane transporter activity
FOC06_05180	COG1752	Esterase of the alpha-beta hydrolase superfamily
FOC06_05220	COG2002	toxin-antitoxin pair type II binding
FOC06_05225	COG1404	Belongs to the peptidase S8 family
FOC06_05230	COG0640	Transcriptional regulator
FOC06_05235	COG0667	Aldo Keto reductase
FOC06_05240	COG2814	Major facilitator Superfamily
FOC06_05265	COG0840	transmembrane signaling receptor activity
FOC06_05280	COG3949	Membrane
FOC06_05285	COG0783	Belongs to the Dps family
FOC06_05300	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FOC06_05310	COG1231	oxidoreductase activity
FOC06_05320	COG4989	oxidoreductase activity
FOC06_05325	COG0523	cobalamin synthesis protein
FOC06_05330	COG0456	acetyltransferase
FOC06_05380	COG0803	Belongs to the bacterial solute-binding protein 9 family
FOC06_05380	COG3443	Belongs to the bacterial solute-binding protein 9 family
FOC06_05385	COG0702	epimerase
FOC06_05395	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FOC06_05405	COG4166	transmembrane transport
FOC06_05420	COG0406	alpha-ribazole phosphatase activity
FOC06_05430	COG5337	Spore coat protein CotH
FOC06_05435	COG1051	belongs to the nudix hydrolase family
FOC06_05440	COG0586	Pfam SNARE associated Golgi protein
FOC06_05445	COG2244	polysaccharide biosynthetic process
FOC06_05455	COG0701	Predicted permease
FOC06_05460	COG3689	TIGRFAM TIGR03943 family protein
FOC06_05465	COG1607	acyl-coa hydrolase
FOC06_05475	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FOC06_05490	COG0702	epimerase
FOC06_05495	COG2839	Protein conserved in bacteria
FOC06_05500	COG1253	flavin adenine dinucleotide binding
FOC06_05515	COG1114	Component of the transport system for branched-chain amino acids
FOC06_05520	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOC06_05540	COG0860	N-Acetylmuramoyl-L-alanine amidase
FOC06_05550	COG1876	peptidase activity
FOC06_05560	COG0154	amidase activity
FOC06_05565	COG2211	Major facilitator Superfamily
FOC06_05585	COG0561	phosphatase activity
FOC06_05595	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FOC06_05615	COG1819	glycosyl
FOC06_05620	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC06_05625	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC06_05650	COG0456	acetyltransferase
FOC06_05700	COG3874	Sporulation protein YtfJ
FOC06_05725	COG2226	methyltransferase
FOC06_05750	COG0346	lactoylglutathione lyase activity
FOC06_05760	COG0604	alcohol dehydrogenase
FOC06_05765	COG1595	DNA-templated transcription, initiation
FOC06_05790	COG0386	Belongs to the glutathione peroxidase family
FOC06_05795	COG1305	Transglutaminase-like
FOC06_05800	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
FOC06_05805	COG0714	Associated with various cellular activities
FOC06_05820	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
FOC06_05825	COG1140	nitrate reductase beta subunit
FOC06_05830	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
FOC06_05835	COG2181	nitrate reductase activity
FOC06_05855	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FOC06_05860	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
FOC06_05865	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FOC06_05870	COG0303	'Molybdopterin
FOC06_05875	COG0314	molybdopterin synthase activity
FOC06_05885	COG2223	nitrite transmembrane transporter activity
FOC06_05900	COG1648	precorrin-2 dehydrogenase activity
FOC06_05910	COG1587	Uroporphyrinogen-III synthase
FOC06_05910	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
FOC06_05915	COG2146	nitrite reductase [NAD(P)H] activity
FOC06_05920	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FOC06_05925	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
FOC06_05960	COG2359	stage V sporulation protein S
FOC06_05975	COG5632	N-Acetylmuramoyl-L-alanine amidase
FOC06_05990	COG1418	mRNA catabolic process
FOC06_05995	COG0488	(ABC) transporter
FOC06_06010	COG0629	single-stranded DNA binding
FOC06_06025	COG1413	lyase activity
FOC06_06040	COG2136	Putative SAM-dependent methyltransferase
FOC06_06040	COG2521	methyltransferase
FOC06_06045	COG0018	arginyl-trna synthetase
FOC06_06070	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
FOC06_06090	COG0017	Asparaginyl-tRNA synthetase
FOC06_06110	COG1674	ftsk spoiiie
FOC06_06180	COG1929	Belongs to the glycerate kinase type-1 family
FOC06_06185	COG0471	metal ion transport
FOC06_06190	COG0745	RESPONSE REGULATOR receiver
FOC06_06195	COG3850	Histidine kinase
FOC06_06195	COG5002	protein histidine kinase activity
FOC06_06210	COG0733	neurotransmitter:sodium symporter activity
FOC06_06235	COG2610	gluconate transmembrane transporter activity
FOC06_06240	COG1454	alcohol dehydrogenase
FOC06_06245	COG1794	racemase activity, acting on amino acids and derivatives
FOC06_06255	COG0456	acetyltransferase
FOC06_06270	COG1131	(ABC) transporter
FOC06_06285	COG0546	phosphoglycolate phosphatase activity
FOC06_06305	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FOC06_06320	COG0768	penicillin binding
FOC06_06325	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
FOC06_06330	COG0204	Acyl-transferase
FOC06_06335	COG1272	protein, Hemolysin III
FOC06_06345	COG0805	protein transport
FOC06_06355	COG1307	EDD domain protein, DegV family
FOC06_06360	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
FOC06_06365	COG1999	signal sequence binding
FOC06_06370	COG0071	Belongs to the small heat shock protein (HSP20) family
FOC06_06375	COG0367	asparagine synthase
FOC06_06390	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FOC06_06395	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FOC06_06420	COG1051	belongs to the nudix hydrolase family
FOC06_06430	COG0668	transmembrane transport
FOC06_06435	COG4585	Histidine kinase
FOC06_06435	COG2203	Gaf domain
FOC06_06440	COG2197	response regulator
FOC06_06450	COG1064	alcohol dehydrogenase
FOC06_06475	COG1070	Carbohydrate kinase
FOC06_06510	COG1125	glycine betaine transport
FOC06_06510	COG0517	IMP dehydrogenase activity
FOC06_06515	COG1174	glycine betaine transport
FOC06_06550	COG1253	flavin adenine dinucleotide binding
FOC06_06555	COG1012	belongs to the aldehyde dehydrogenase family
FOC06_06560	COG5506	Protein of unknown function (DUF1694)
FOC06_06575	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FOC06_06580	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
FOC06_06585	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
FOC06_06590	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FOC06_06595	COG0456	acetyltransferase
FOC06_06600	COG3829	transcription factor binding
FOC06_06605	COG1509	lysine 2,3-aminomutase activity
FOC06_06645	COG4326	sporulation control protein
FOC06_06650	COG0671	phosphoesterase, PA-phosphatase related
FOC06_06655	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
FOC06_06660	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC06_06690	COG1787	Restriction endonuclease
FOC06_06690	COG1715	Restriction endonuclease
FOC06_06780	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FOC06_06820	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FOC06_06820	COG4499	WXG100 protein secretion system (Wss), protein YukC
FOC06_06825	COG2814	Major facilitator Superfamily
FOC06_06830	COG4841	protein insertion into membrane
FOC06_06835	COG0372	Belongs to the citrate synthase family
FOC06_06840	COG2079	MmgE PrpD family protein
FOC06_06845	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
FOC06_06850	COG1960	acyl-CoA dehydrogenase activity
FOC06_06855	COG2084	Dehydrogenase
FOC06_06860	COG1012	belongs to the aldehyde dehydrogenase family
FOC06_06865	COG1280	lysine exporter protein (LysE YggA)
FOC06_06870	COG1024	Enoyl-CoA hydratase
FOC06_06885	COG0420	3'-5' exonuclease activity
FOC06_06890	COG0419	ATPase involved in DNA repair
FOC06_06910	COG2223	nitrite transmembrane transporter activity
FOC06_06915	COG1028	Short-chain dehydrogenase reductase Sdr
FOC06_06920	COG1169	isochorismate synthase
FOC06_06925	COG1021	2,3-dihydroxybenzoate-AMP ligase
FOC06_06930	COG1535	isochorismatase
FOC06_06930	COG3433	isochorismatase activity
FOC06_06935	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FOC06_06940	COG3251	PFAM MbtH domain protein
FOC06_06945	COG2814	Major facilitator Superfamily
FOC06_06960	COG0776	regulation of translation
FOC06_06970	COG2318	DinB family
FOC06_06980	COG1115	amino acid carrier protein
FOC06_06995	COG2329	Antibiotic biosynthesis monooxygenase
FOC06_07000	COG1187	pseudouridine synthase activity
FOC06_07005	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
FOC06_07020	COG0596	Alpha beta hydrolase
FOC06_07025	COG2814	Major facilitator Superfamily
FOC06_07045	COG2226	methyltransferase
FOC06_07090	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC06_07125	COG1247	-acetyltransferase
FOC06_07165	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC06_07175	COG1278	Cold shock
FOC06_07190	COG0010	Belongs to the arginase family
FOC06_07195	COG0561	phosphatase activity
FOC06_07235	COG0583	DNA-binding transcription factor activity
FOC06_07240	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FOC06_07255	COG0583	DNA-binding transcription factor activity
FOC06_07260	COG2258	MOSC domain
FOC06_07275	COG1132	(ABC) transporter
FOC06_07280	COG1132	(ABC) transporter
FOC06_07300	COG1396	sequence-specific DNA binding
FOC06_07330	COG1595	DNA-templated transcription, initiation
FOC06_07380	COG2971	BadF BadG BcrA BcrD
FOC06_07385	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
FOC06_07390	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
FOC06_07410	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC06_07440	COG1309	transcriptional regulator
FOC06_07455	COG0577	efflux transmembrane transporter activity
FOC06_07455	COG1136	(ABC) transporter
FOC06_07460	COG3615	Tellurite resistance protein tehB
FOC06_07460	COG0500	methyltransferase
FOC06_07470	COG2226	methyltransferase
FOC06_07475	COG3961	Belongs to the TPP enzyme family
FOC06_07480	COG1846	Transcriptional regulator
FOC06_07510	COG2195	Cleaves the N-terminal amino acid of tripeptides
FOC06_07525	COG1595	DNA-templated transcription, initiation
FOC06_07535	COG0768	penicillin binding
FOC06_07545	COG2367	Beta-lactamase
FOC06_07550	COG0671	phosphoesterase, PA-phosphatase related
FOC06_07555	COG1609	Transcriptional regulator
FOC06_07560	COG2814	Major facilitator Superfamily
FOC06_07565	COG0673	inositol 2-dehydrogenase activity
FOC06_07575	COG1012	belongs to the aldehyde dehydrogenase family
FOC06_07595	COG3718	enzyme involved in inositol metabolism
FOC06_07620	COG0457	Tetratricopeptide repeat
FOC06_07625	COG1476	TRANSCRIPTIONal
FOC06_07640	COG1876	peptidase activity
FOC06_07660	COG1309	transcriptional regulator
FOC06_07680	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC06_07695	COG1252	NADH dehydrogenase
FOC06_07700	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FOC06_07715	COG1131	(ABC) transporter
FOC06_07725	COG1309	transcriptional regulator
FOC06_07740	COG1960	acyl-CoA dehydrogenase activity
FOC06_07745	COG0439	Biotin carboxylase
FOC06_07750	COG0511	ligase activity, forming carbon-carbon bonds
FOC06_07755	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FOC06_07760	COG1024	Enoyl-CoA hydratase
FOC06_07765	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
FOC06_07770	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FOC06_07780	COG1247	-acetyltransferase
FOC06_07785	COG0572	uridine kinase
FOC06_07795	COG2318	DinB family
FOC06_07800	COG1686	Belongs to the peptidase S11 family
FOC06_07825	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FOC06_07865	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
FOC06_07865	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
FOC06_07880	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FOC06_07890	COG2814	Major facilitator Superfamily
FOC06_07910	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
FOC06_07930	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC06_07945	COG1063	alcohol dehydrogenase
FOC06_07970	COG3773	Cell wall hydrolase
FOC06_07980	COG0745	RESPONSE REGULATOR receiver
FOC06_08010	COG1136	(ABC) transporter
FOC06_08035	COG0460	homoserine dehydrogenase
FOC06_08040	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC06_08050	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
FOC06_08115	COG2124	cytochrome p450
FOC06_08150	COG0561	phosphatase activity
FOC06_08160	COG5002	protein histidine kinase activity
FOC06_08170	COG1819	glycosyl
FOC06_08175	COG1794	racemase activity, acting on amino acids and derivatives
FOC06_08185	COG1122	ATPase activity
FOC06_08200	COG2205	protein histidine kinase activity
FOC06_08215	COG0604	alcohol dehydrogenase
FOC06_08230	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FOC06_08265	COG0693	protein deglycase activity
FOC06_08295	COG2814	Major facilitator Superfamily
FOC06_08310	COG0584	glycerophosphoryl diester phosphodiesterase
FOC06_08330	COG0697	spore germination
FOC06_08360	COG2223	nitrite transmembrane transporter activity
FOC06_08375	COG2816	NAD+ diphosphatase activity
FOC06_08380	COG0592	DNA-directed DNA polymerase activity
FOC06_08385	COG1051	belongs to the nudix hydrolase family
FOC06_08420	COG3878	Protein conserved in bacteria
FOC06_08470	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FOC06_08485	COG0322	excinuclease ABC activity
FOC06_08525	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC06_08550	COG1011	Hydrolase
FOC06_08570	COG0076	glutamate decarboxylase activity
FOC06_08585	COG1523	belongs to the glycosyl hydrolase 13 family
FOC06_08590	COG3227	Zinc metalloprotease (Elastase)
FOC06_08610	COG0201	protein transport
FOC06_08620	COG0697	spore germination
FOC06_08625	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC06_08655	COG4129	membrane
FOC06_08660	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC06_08675	COG2959	enzyme of heme biosynthesis
FOC06_08680	COG3773	Cell wall hydrolase
FOC06_08680	COG3409	Peptidoglycan-binding domain 1 protein
FOC06_08695	COG3483	tryptophan 2,3-dioxygenase activity
FOC06_08700	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
FOC06_08705	COG3844	kynureninase activity
FOC06_08710	COG1309	transcriptional regulator
FOC06_08740	COG3284	Transcriptional regulator
FOC06_08755	COG1349	DNA-binding transcription factor activity
FOC06_08775	COG1959	2 iron, 2 sulfur cluster binding
FOC06_08790	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FOC06_08795	COG0508	dehydrogenase complex catalyzes the overall conversion of
FOC06_08800	COG0022	dehydrogenase e1 component
FOC06_08805	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
FOC06_08815	COG1028	Short-chain dehydrogenase reductase Sdr
FOC06_08820	COG0456	acetyltransferase
FOC06_08820	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
FOC06_08850	COG4176	ABC-type proline glycine betaine transport system permease component
FOC06_08855	COG0517	IMP dehydrogenase activity
FOC06_08855	COG4175	Glycine betaine
FOC06_08865	COG0740	serine-type endopeptidase activity
FOC06_08880	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
FOC06_08885	COG2153	protein acetylation
FOC06_08890	COG3397	chitin binding
FOC06_08905	COG2205	protein histidine kinase activity
FOC06_08925	COG0658	competence protein
FOC06_08925	COG2333	competence protein COMEC
FOC06_08975	COG3973	AAA domain
FOC06_08990	COG2105	PFAM AIG2 family protein
FOC06_08995	COG0514	ATP-dependent DNA helicase (RecQ)
FOC06_09015	COG4637	Psort location Cytoplasmic, score
FOC06_09040	COG3397	chitin binding
FOC06_09055	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FOC06_09060	COG1115	amino acid carrier protein
FOC06_09065	COG1012	belongs to the aldehyde dehydrogenase family
FOC06_09070	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FOC06_09080	COG3938	Belongs to the proline racemase family
FOC06_09085	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC06_09125	COG0586	Pfam SNARE associated Golgi protein
FOC06_09140	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
FOC06_09145	COG0519	Catalyzes the synthesis of GMP from XMP
FOC06_09150	COG4166	transmembrane transport
FOC06_09160	COG4948	Mandelate Racemase Muconate Lactonizing
FOC06_09205	COG2936	dipeptidyl-peptidase activity
FOC06_09210	COG5002	protein histidine kinase activity
FOC06_09250	COG1164	Oligoendopeptidase f
FOC06_09265	COG1307	EDD domain protein, DegV family
FOC06_09285	COG2814	Major facilitator Superfamily
FOC06_09295	COG1664	Polymer-forming cytoskeletal
FOC06_09300	COG0789	Transcriptional regulator
FOC06_09305	COG4533	DNA binding
FOC06_09310	COG0477	Major facilitator Superfamily
FOC06_09310	COG2814	Major facilitator Superfamily
FOC06_09330	COG2261	transglycosylase associated protein
FOC06_09345	COG2226	methyltransferase
FOC06_09380	COG0436	Aminotransferase
FOC06_09385	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
FOC06_09390	COG5146	pantothenate kinase activity
FOC06_09450	COG0628	permease
FOC06_09460	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FOC06_09465	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC06_09470	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FOC06_09475	COG1116	anion transmembrane transporter activity
FOC06_09515	COG2746	aminoglycoside 3-N-acetyltransferase activity
FOC06_09540	COG0697	spore germination
FOC06_09545	COG2318	DinB family
FOC06_09565	COG4912	Dna alkylation repair
FOC06_09575	COG0726	polysaccharide deacetylase
FOC06_09585	COG0861	Integral membrane protein TerC family
FOC06_09590	COG1368	sulfuric ester hydrolase activity
FOC06_09595	COG0488	(ABC) transporter
FOC06_09605	COG1033	growth of symbiont in host cell
FOC06_09605	COG2409	Drug exporters of the RND superfamily
FOC06_09610	COG2409	Drug exporters of the RND superfamily
FOC06_09610	COG1033	growth of symbiont in host cell
FOC06_09615	COG1033	growth of symbiont in host cell
FOC06_09615	COG2409	Drug exporters of the RND superfamily
FOC06_09620	COG1309	transcriptional regulator
FOC06_09635	COG0287	Prephenate dehydrogenase
FOC06_09640	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
FOC06_09645	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
FOC06_09650	COG1605	Chorismate mutase
FOC06_09650	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
FOC06_09685	COG1388	LysM domain
FOC06_09685	COG3584	3D domain protein
FOC06_09695	COG1595	DNA-templated transcription, initiation
FOC06_09720	COG1879	ABC-type sugar transport system periplasmic component
FOC06_09730	COG1172	Belongs to the binding-protein-dependent transport system permease family
FOC06_09740	COG2390	Transcriptional regulator
FOC06_09775	COG2329	Antibiotic biosynthesis monooxygenase
FOC06_09795	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FOC06_09805	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
FOC06_09810	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
FOC06_09815	COG4187	Peptidase family M20/M25/M40
FOC06_09820	COG1414	Transcriptional regulator
FOC06_09825	COG0833	amino acid
FOC06_09830	COG1690	Belongs to the RtcB family
FOC06_09835	COG3239	Fatty acid desaturase
FOC06_09840	COG1785	Belongs to the alkaline phosphatase family
FOC06_09850	COG3655	Transcriptional regulator
FOC06_09865	COG4377	Putative membrane peptidase family (DUF2324)
FOC06_09875	COG3279	Response regulator of the LytR AlgR family
FOC06_09885	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC06_09890	COG0346	lactoylglutathione lyase activity
FOC06_09910	COG0714	Associated with various cellular activities
FOC06_09935	COG0463	Glycosyl transferase, family 2
FOC06_09960	COG0463	Glycosyl transferase, family 2
FOC06_09970	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FOC06_09975	COG0753	catalase activity
FOC06_09985	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
FOC06_10010	COG0714	Associated with various cellular activities
FOC06_10020	COG0778	Nitroreductase
FOC06_10025	COG1846	Transcriptional regulator
FOC06_10060	COG1725	Transcriptional regulator
FOC06_10070	COG1136	(ABC) transporter
FOC06_10070	COG0577	efflux transmembrane transporter activity
FOC06_10095	COG2207	Transcriptional regulator
FOC06_10100	COG0456	acetyltransferase
FOC06_10120	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC06_10140	COG0642	Histidine kinase
FOC06_10145	COG0745	RESPONSE REGULATOR receiver
FOC06_10150	COG0596	Alpha beta hydrolase
FOC06_10180	COG0730	response to heat
FOC06_10190	COG0833	amino acid
FOC06_10200	COG4335	DNA alkylation repair
FOC06_10250	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
FOC06_10280	COG1984	allophanate hydrolase subunit 2
FOC06_10285	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
FOC06_10290	COG1414	Transcriptional regulator
FOC06_10305	COG0860	N-Acetylmuramoyl-L-alanine amidase
FOC06_10310	COG0640	Transcriptional regulator
FOC06_10320	COG1960	acyl-CoA dehydrogenase activity
FOC06_10350	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
FOC06_10365	COG3848	Pyruvate phosphate dikinase
FOC06_10365	COG0574	Belongs to the PEP-utilizing enzyme family
FOC06_10370	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC06_10385	COG5577	PFAM Coat F domain
FOC06_10390	COG3403	YqcI/YcgG family
FOC06_10395	COG1280	lysine exporter protein (LysE YggA)
FOC06_10425	COG1063	alcohol dehydrogenase
FOC06_10440	COG1027	Aspartate ammonia-lyase
FOC06_10445	COG0252	asparaginase activity
FOC06_10450	COG1396	sequence-specific DNA binding
FOC06_10460	COG0322	excinuclease ABC activity
FOC06_10465	COG0531	amino acid
FOC06_10470	COG1114	Component of the transport system for branched-chain amino acids
FOC06_10475	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
FOC06_10485	COG0281	malic enzyme
FOC06_10510	COG0784	Response regulator, receiver
FOC06_10520	COG2066	Belongs to the glutaminase family
FOC06_10555	COG0737	Belongs to the 5'-nucleotidase family
FOC06_10560	COG0753	catalase activity
FOC06_10565	COG2267	carboxylic ester hydrolase activity
FOC06_10570	COG1335	isochorismatase
FOC06_10590	COG0583	DNA-binding transcription factor activity
FOC06_10595	COG1846	Transcriptional regulator
FOC06_10635	COG0415	Belongs to the DNA photolyase family
FOC06_10640	COG0288	reversible hydration of carbon dioxide
FOC06_10650	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
FOC06_10655	COG5609	conserved protein (DUF2294)
FOC06_10670	COG1575	Belongs to the MenA family. Type 1 subfamily
FOC06_10675	COG2267	carboxylic ester hydrolase activity
FOC06_10680	COG0803	Belongs to the bacterial solute-binding protein 9 family
FOC06_10685	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FOC06_10690	COG1121	(ABC) transporter
FOC06_10720	COG0798	PFAM Bile acid sodium symporter
FOC06_10725	COG0346	lactoylglutathione lyase activity
FOC06_10730	COG0640	Transcriptional regulator
FOC06_10745	COG0443	Heat shock 70 kDa protein
FOC06_10760	COG1522	sequence-specific DNA binding
FOC06_10775	COG0346	lactoylglutathione lyase activity
FOC06_10800	COG2169	Transcriptional regulator
FOC06_10840	COG2814	Major facilitator Superfamily
FOC06_10865	COG0745	RESPONSE REGULATOR receiver
FOC06_10870	COG3850	Histidine kinase
FOC06_10870	COG5002	protein histidine kinase activity
FOC06_10895	COG2515	1-aminocyclopropane-1-carboxylate deaminase
FOC06_10915	COG1476	TRANSCRIPTIONal
FOC06_10930	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC06_10935	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FOC06_10945	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FOC06_10950	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
FOC06_10965	COG1136	(ABC) transporter
FOC06_10970	COG0577	efflux transmembrane transporter activity
FOC06_10985	COG3850	Histidine kinase
FOC06_10985	COG5002	protein histidine kinase activity
FOC06_10995	COG2364	Membrane
FOC06_11000	COG1846	Transcriptional regulator
FOC06_11010	COG2808	Putative FMN-binding domain
FOC06_11015	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC06_11020	COG2271	Major facilitator Superfamily
FOC06_11025	COG1556	Lactate utilization protein
FOC06_11030	COG1139	Iron-sulfur cluster binding protein
FOC06_11040	COG0583	DNA-binding transcription factor activity
FOC06_11050	COG1619	proteins homologs of microcin C7 resistance protein MccF
FOC06_11075	COG0738	Major facilitator superfamily
FOC06_11080	COG0673	inositol 2-dehydrogenase activity
FOC06_11085	COG0561	phosphatase activity
FOC06_11095	COG1609	Transcriptional regulator
FOC06_11100	COG0457	Tetratricopeptide repeat
FOC06_11115	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
FOC06_11145	COG0534	Mate efflux family protein
FOC06_11165	COG2814	Major facilitator Superfamily
FOC06_11170	COG1309	transcriptional regulator
FOC06_11185	COG0814	amino acid
FOC06_11190	COG1760	l-serine dehydratase
FOC06_11195	COG1760	l-serine dehydratase
FOC06_11205	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FOC06_11210	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
FOC06_11220	COG1335	isochorismatase
FOC06_11225	COG1522	sequence-specific DNA binding
FOC06_11230	COG0531	amino acid
FOC06_11245	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FOC06_11265	COG1595	DNA-templated transcription, initiation
FOC06_11280	COG0662	Cupin 2, conserved barrel domain protein
FOC06_11285	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FOC06_11285	COG2207	Transcriptional regulator
FOC06_11335	COG0477	Major facilitator Superfamily
FOC06_11345	COG1846	Transcriptional regulator
FOC06_11350	COG2814	Major facilitator Superfamily
FOC06_11365	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
FOC06_11370	COG1131	(ABC) transporter
FOC06_11390	COG2076	Multidrug Resistance protein
FOC06_11395	COG1309	transcriptional regulator
FOC06_11405	COG2031	fatty acid transporter
FOC06_11415	COG2249	NAD(P)H dehydrogenase (quinone) activity
FOC06_11445	COG1122	ATPase activity
FOC06_11450	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
FOC06_11465	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FOC06_11470	COG1288	antiporter activity
FOC06_11475	COG2356	endonuclease I
FOC06_11490	COG3620	sequence-specific DNA binding
FOC06_11495	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
FOC06_11500	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FOC06_11505	COG0124	histidyl-tRNA synthetase
FOC06_11520	COG1733	regulation of RNA biosynthetic process
FOC06_11525	COG0778	Nitroreductase
FOC06_11545	COG1028	Short-chain dehydrogenase reductase Sdr
FOC06_11555	COG1131	(ABC) transporter
FOC06_11580	COG1011	Hydrolase
FOC06_11615	COG0346	lactoylglutathione lyase activity
FOC06_11620	COG1940	carbohydrate kinase activity
FOC06_11625	COG0738	Major facilitator superfamily
FOC06_11630	COG0110	maltose O-acetyltransferase activity
FOC06_11640	COG1136	(ABC) transporter
FOC06_11645	COG0180	Tryptophanyl-tRNA synthetase
FOC06_11650	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
FOC06_11655	COG0628	permease
FOC06_11670	COG2226	methyltransferase
FOC06_11680	COG0477	Major facilitator Superfamily
FOC06_11710	COG1253	flavin adenine dinucleotide binding
FOC06_11715	COG0789	Transcriptional regulator
FOC06_11720	COG0697	spore germination
FOC06_11725	COG1357	PFAM Pentapeptide repeats (8 copies)
FOC06_11730	COG3813	Protein conserved in bacteria
FOC06_11735	COG2706	6-phosphogluconolactonase activity
FOC06_11740	COG1070	Carbohydrate kinase
FOC06_11750	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FOC06_11755	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
FOC06_11765	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
FOC06_11770	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
FOC06_11775	COG0604	alcohol dehydrogenase
FOC06_11780	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FOC06_11795	COG1028	Short-chain dehydrogenase reductase Sdr
FOC06_11820	COG0656	L-ascorbic acid biosynthetic process
FOC06_11825	COG2814	Major facilitator Superfamily
FOC06_11840	COG0346	lactoylglutathione lyase activity
FOC06_11845	COG0814	amino acid
FOC06_11870	COG1393	Belongs to the ArsC family
FOC06_11875	COG1733	regulation of RNA biosynthetic process
FOC06_11880	COG2188	Transcriptional regulator
FOC06_11890	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FOC06_11895	COG1733	regulation of RNA biosynthetic process
FOC06_11900	COG1733	regulation of RNA biosynthetic process
FOC06_11915	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC06_11935	COG0384	phenazine biosynthesis protein PhzF
FOC06_11945	COG1028	Short-chain dehydrogenase reductase Sdr
FOC06_11955	COG0318	PFAM AMP-dependent synthetase and ligase
FOC06_11965	COG1733	regulation of RNA biosynthetic process
FOC06_12000	COG1191	sigma factor activity
FOC06_12015	COG1309	transcriptional regulator
FOC06_12035	COG3152	Membrane
FOC06_12060	COG1151	hydroxylamine reductase activity
FOC06_12070	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC06_12075	COG3757	hydrolase, family 25
FOC06_12075	COG3409	Peptidoglycan-binding domain 1 protein
FOC06_12110	COG2072	flavoprotein involved in K transport
FOC06_12150	COG1113	amino acid transport
FOC06_12155	COG2814	Major facilitator Superfamily
FOC06_12185	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
FOC06_12190	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
FOC06_12210	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FOC06_12215	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC06_12220	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC06_12225	COG3739	integral membrane protein
FOC06_12230	COG0384	phenazine biosynthesis protein PhzF
FOC06_12260	COG0583	DNA-binding transcription factor activity
FOC06_12280	COG1193	negative regulation of DNA recombination
FOC06_12300	COG1164	Oligoendopeptidase f
FOC06_12305	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FOC06_12335	COG0584	glycerophosphoryl diester phosphodiesterase
FOC06_12360	COG0640	Transcriptional regulator
FOC06_12365	COG0604	alcohol dehydrogenase
FOC06_12385	COG2808	Putative FMN-binding domain
FOC06_12390	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
FOC06_12400	COG0385	Bile acid
FOC06_12405	COG0277	FAD linked oxidase domain protein
FOC06_12435	COG1216	Glycosyl transferase, family 2
FOC06_12440	COG1024	Enoyl-CoA hydratase
FOC06_12450	COG1285	pathogenesis
FOC06_12465	COG2514	catechol 2,3-dioxygenase activity
FOC06_12470	COG2720	vancomycin resistance protein
FOC06_12500	COG1278	Cold shock
FOC06_12510	COG0716	FMN binding
FOC06_12540	COG1028	Short-chain dehydrogenase reductase Sdr
FOC06_12550	COG0165	Argininosuccinate lyase
FOC06_12565	COG4145	pantothenate transmembrane transporter activity
FOC06_12575	COG1012	belongs to the aldehyde dehydrogenase family
FOC06_12580	COG1028	Short-chain dehydrogenase reductase Sdr
FOC06_12590	COG1657	PFAM Prenyltransferase squalene oxidase
FOC06_12595	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
FOC06_12600	COG2962	Rard protein
FOC06_12605	COG3326	Membrane
FOC06_12620	COG0489	protein tyrosine kinase activity
FOC06_12630	COG0314	molybdopterin synthase activity
FOC06_12635	COG0303	'Molybdopterin
FOC06_12640	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FOC06_12645	COG2116	formate transmembrane transporter activity
FOC06_12655	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
FOC06_12660	COG5609	conserved protein (DUF2294)
FOC06_12665	COG2427	Protein of unknown function (DUF1641)
FOC06_12670	COG3383	formate dehydrogenase (NAD+) activity
FOC06_12675	COG0697	spore germination
FOC06_12715	COG2226	methyltransferase
FOC06_12720	COG4166	transmembrane transport
FOC06_12725	COG4166	transmembrane transport
FOC06_12730	COG4166	transmembrane transport
FOC06_12740	COG1316	TRANSCRIPTIONal
FOC06_12750	COG1595	DNA-templated transcription, initiation
FOC06_12765	COG1131	(ABC) transporter
FOC06_12775	COG0673	inositol 2-dehydrogenase activity
FOC06_12780	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
FOC06_12785	COG0187	DNA topoisomerase II activity
FOC06_12790	COG1832	CoA-binding protein
FOC06_12795	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FOC06_12800	COG0745	RESPONSE REGULATOR receiver
FOC06_12815	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
FOC06_12820	COG4841	protein insertion into membrane
FOC06_12825	COG0824	Thioesterase
FOC06_12855	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC06_12865	COG2274	protein secretion by the type I secretion system
FOC06_12870	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
FOC06_12880	COG0726	polysaccharide deacetylase
FOC06_12910	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
FOC06_12925	COG0183	Belongs to the thiolase family
FOC06_12930	COG0318	PFAM AMP-dependent synthetase and ligase
FOC06_12935	COG1268	BioY protein
FOC06_12940	COG0318	PFAM AMP-dependent synthetase and ligase
FOC06_12990	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC06_13000	COG5002	protein histidine kinase activity
FOC06_13005	COG0400	carboxylic ester hydrolase activity
FOC06_13010	COG0346	lactoylglutathione lyase activity
FOC06_13015	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FOC06_13020	COG0069	glutamate synthase activity
FOC06_13025	COG1902	pentaerythritol trinitrate reductase activity
FOC06_13030	COG1329	Transcriptional regulator
FOC06_13035	COG0010	Belongs to the arginase family
FOC06_13060	COG2226	methyltransferase
FOC06_13115	COG4846	Membrane protein involved in cytochrome C biogenesis
FOC06_13120	COG0785	Cytochrome C biogenesis protein
FOC06_13130	COG0583	DNA-binding transcription factor activity
FOC06_13135	COG1380	Effector of murein hydrolase LrgA
FOC06_13140	COG1346	cytolysis
FOC06_13165	COG3409	Peptidoglycan-binding domain 1 protein
FOC06_13165	COG5632	N-Acetylmuramoyl-L-alanine amidase
FOC06_13180	COG1132	(ABC) transporter
FOC06_13185	COG1132	(ABC) transporter
FOC06_13215	COG3639	organic phosphonate transmembrane transporter activity
FOC06_13220	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
FOC06_13240	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
FOC06_13260	COG1695	Transcriptional regulator
FOC06_13290	COG1388	LysM domain
FOC06_13290	COG5632	N-Acetylmuramoyl-L-alanine amidase
FOC06_13290	COG3409	Peptidoglycan-binding domain 1 protein
FOC06_13295	COG4824	toxin secretion phage lysis holin
FOC06_13440	COG1595	DNA-templated transcription, initiation
FOC06_13480	COG1351	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NAD(P)H and FADH(2) as the reductant
FOC06_13560	COG1396	sequence-specific DNA binding
FOC06_13580	COG0174	glutamine synthetase
FOC06_13585	COG0789	Transcriptional regulator
FOC06_13590	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
FOC06_13600	COG2860	membrane
FOC06_13610	COG0464	growth
FOC06_13640	COG3584	3D domain protein
FOC06_13640	COG1388	LysM domain
FOC06_13645	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOC06_13645	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FOC06_13645	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FOC06_13650	COG1105	Belongs to the carbohydrate kinase PfkB family
FOC06_13655	COG1349	DNA-binding transcription factor activity
FOC06_13665	COG2322	membrane
FOC06_13675	COG1113	amino acid transport
FOC06_13685	COG1408	metallophosphoesterase
FOC06_13690	COG2116	formate transmembrane transporter activity
FOC06_13700	COG2217	Heavy metal translocating P-type atpase
FOC06_13705	COG2608	mercury ion transmembrane transporter activity
FOC06_13710	COG1937	Protein conserved in bacteria
FOC06_13720	COG2819	hydrolase of the alpha beta superfamily
FOC06_13725	COG1120	ATPase activity
FOC06_13730	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC06_13735	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC06_13745	COG0708	Exodeoxyribonuclease III
FOC06_13750	COG2169	Transcriptional regulator
FOC06_13755	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FOC06_13760	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
FOC06_13770	COG2364	Membrane
FOC06_13785	COG2267	carboxylic ester hydrolase activity
FOC06_13790	COG0346	lactoylglutathione lyase activity
FOC06_13795	COG5001	Diguanylate cyclase
FOC06_13795	COG3300	MHYT domain
FOC06_13815	COG1346	cytolysis
FOC06_13820	COG1380	Effector of murein hydrolase LrgA
FOC06_13825	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC06_13830	COG0596	Alpha beta hydrolase
FOC06_13830	COG0508	dehydrogenase complex catalyzes the overall conversion of
FOC06_13835	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
FOC06_13855	COG1404	Belongs to the peptidase S8 family
FOC06_13860	COG3773	Cell wall hydrolase
FOC06_13865	COG0562	UDP-galactopyranose mutase
FOC06_13870	COG1368	sulfuric ester hydrolase activity
FOC06_13875	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
FOC06_13885	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
FOC06_13930	COG4550	Control of competence regulator ComK, YlbF/YmcA
FOC06_13935	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
FOC06_13940	COG1013	pyruvate-flavodoxin oxidoreductase activity
FOC06_13945	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
FOC06_13945	COG0674	pyruvate-flavodoxin oxidoreductase activity
FOC06_13955	COG2359	stage V sporulation protein S
FOC06_13960	COG1692	metallophosphoesterase
FOC06_13985	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
FOC06_13990	COG1426	Protein conserved in bacteria
FOC06_14005	COG0300	oxidoreductase activity
FOC06_14010	COG0612	Peptidase, M16
FOC06_14015	COG0612	Peptidase, M16
FOC06_14040	COG2188	Transcriptional regulator
FOC06_14045	COG1674	ftsk spoiiie
FOC06_14055	COG0740	serine-type endopeptidase activity
FOC06_14060	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
FOC06_14070	COG0527	aspartate kinase activity
FOC06_14075	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FOC06_14080	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
FOC06_14085	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FOC06_14090	COG1873	PFAM PRC-barrel domain
FOC06_14095	COG0612	Peptidase, M16
FOC06_14100	COG0726	polysaccharide deacetylase
FOC06_14115	COG0196	riboflavin kinase activity
FOC06_14120	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
FOC06_14130	COG1550	Protein conserved in bacteria
FOC06_14140	COG1358	cellular component organization or biogenesis
FOC06_14145	COG2740	Nucleic-acid-binding protein implicated in transcription termination
FOC06_14150	COG0195	Participates in both transcription termination and antitermination
FOC06_14170	COG0750	zinc metalloprotease
FOC06_14175	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
FOC06_14180	COG4589	Belongs to the CDS family
FOC06_14185	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
FOC06_14195	COG0528	UMP kinase activity
FOC06_14225	COG4974	Belongs to the 'phage' integrase family
FOC06_14235	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FOC06_14245	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
FOC06_14285	COG1837	Belongs to the UPF0109 family
FOC06_14295	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
FOC06_14305	COG0552	protein localization to endoplasmic reticulum
FOC06_14310	COG1196	nuclear chromosome segregation
FOC06_14325	COG1028	Short-chain dehydrogenase reductase Sdr
FOC06_14330	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
FOC06_14345	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
FOC06_14350	COG1461	Dihydroxyacetone kinase
FOC06_14355	COG1302	Protein conserved in bacteria
FOC06_14370	COG1564	THIamine pyrophosphokinase
FOC06_14375	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
FOC06_14380	COG1162	GTPase activity
FOC06_14385	COG0515	serine threonine protein kinase
FOC06_14385	COG2815	serine threonine protein kinase
FOC06_14390	COG0631	protein serine/threonine phosphatase activity
FOC06_14400	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FOC06_14400	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FOC06_14410	COG0242	peptide deformylase activity
FOC06_14415	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
FOC06_14420	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
FOC06_14430	COG0194	GDP metabolic process
FOC06_14440	COG1561	YicC-like family, N-terminal region
FOC06_14445	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
FOC06_14455	COG0006	proline dipeptidase activity
FOC06_14470	COG3069	C4-dicarboxylate transmembrane transporter activity
FOC06_14510	COG0505	Belongs to the CarA family
FOC06_14535	COG0564	pseudouridine synthase activity
FOC06_14555	COG3599	regulation of cell shape
FOC06_14560	COG2302	S4 RNA-binding domain
FOC06_14565	COG0762	integral membrane protein
FOC06_14575	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
FOC06_14585	COG1873	PFAM PRC-barrel domain
FOC06_14590	COG1191	sigma factor activity
FOC06_14595	COG1191	sigma factor activity
FOC06_14605	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
FOC06_14610	COG0849	cell division
FOC06_14615	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
FOC06_14620	COG0812	UDP-N-acetylmuramate dehydrogenase activity
FOC06_14625	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
FOC06_14630	COG0772	Belongs to the SEDS family
FOC06_14645	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FOC06_14650	COG0768	penicillin binding
FOC06_14660	COG4839	cell division protein FtsL
FOC06_14675	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
FOC06_14700	COG1399	metal-binding, possibly nucleic acid-binding protein
FOC06_14750	COG4824	toxin secretion phage lysis holin
FOC06_14840	COG4626	Terminase
FOC06_14840	COG1802	Transcriptional regulator
FOC06_14865	COG0582	viral genome integration into host DNA
FOC06_14940	COG1191	sigma factor activity
FOC06_14965	COG1484	DNA-dependent DNA replication
FOC06_14985	COG1396	sequence-specific DNA binding
FOC06_14995	COG1396	sequence-specific DNA binding
FOC06_15005	COG0582	viral genome integration into host DNA
FOC06_15015	COG3480	Lon protease (S16) C-terminal proteolytic domain
FOC06_15020	COG1752	Esterase of the alpha-beta hydrolase superfamily
FOC06_15025	COG3314	Sporulation integral membrane protein YlbJ
FOC06_15035	COG0742	ribosomal rna small subunit methyltransferase
FOC06_15050	COG3679	Belongs to the UPF0342 family
FOC06_15055	COG0406	alpha-ribazole phosphatase activity
FOC06_15070	COG2340	Cysteine-rich secretory protein family
FOC06_15085	COG3336	cytochrome c oxidase
FOC06_15120	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
FOC06_15130	COG4838	Belongs to the UPF0358 family
FOC06_15135	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
FOC06_15140	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
FOC06_15150	COG4896	Protein conserved in bacteria
FOC06_15175	COG0483	inositol monophosphate 1-phosphatase activity
FOC06_15195	COG1982	Orn Lys Arg decarboxylase major
FOC06_15240	COG0508	dehydrogenase complex catalyzes the overall conversion of
FOC06_15245	COG0022	dehydrogenase e1 component
FOC06_15250	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
FOC06_15260	COG0242	peptide deformylase activity
FOC06_15275	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
FOC06_15280	COG0569	domain protein
FOC06_15300	COG0583	DNA-binding transcription factor activity
FOC06_15305	COG0517	IMP dehydrogenase activity
FOC06_15315	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
FOC06_15320	COG4703	Protein of unknown function (DUF1797)
FOC06_15335	COG2200	EAL domain
FOC06_15340	COG1028	Short-chain dehydrogenase reductase Sdr
FOC06_15345	COG1408	metallophosphoesterase
FOC06_15355	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
FOC06_15390	COG2814	Major facilitator Superfamily
FOC06_15410	COG3209	COG3209 Rhs family protein
FOC06_15420	COG2205	protein histidine kinase activity
FOC06_15430	COG0436	Aminotransferase
FOC06_15435	COG1609	Transcriptional regulator
FOC06_15440	COG3833	ABC-type maltose transport systems, permease component
FOC06_15445	COG1175	transmembrane transport
FOC06_15450	COG2182	Extracellular solute-binding protein
FOC06_15460	COG0366	Alpha amylase catalytic
FOC06_15465	COG3842	ATPase activity
FOC06_15505	COG0183	Belongs to the thiolase family
FOC06_15545	COG1695	Transcriptional regulator
FOC06_15550	COG1028	Short-chain dehydrogenase reductase Sdr
FOC06_15570	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FOC06_15575	COG0436	Aminotransferase
FOC06_15595	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
FOC06_15615	COG3706	GGDEF domain
FOC06_15620	COG0778	Nitroreductase
FOC06_15645	COG2190	(PTS) system
FOC06_15645	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOC06_15645	COG1263	PTS System
FOC06_15650	COG3711	transcriptional antiterminator
FOC06_15670	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
FOC06_15695	COG1547	Domain of unknown function (DUF309)
FOC06_15700	COG0456	acetyltransferase
FOC06_15705	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
FOC06_15710	COG4086	secreted protein
FOC06_15715	COG0561	phosphatase activity
FOC06_15720	COG0697	spore germination
FOC06_15735	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FOC06_15760	COG0733	neurotransmitter:sodium symporter activity
FOC06_15780	COG1686	Belongs to the peptidase S11 family
FOC06_15785	COG1725	Transcriptional regulator
FOC06_15790	COG1131	(ABC) transporter
FOC06_15805	COG1846	Transcriptional regulator
FOC06_15820	COG0598	Magnesium transport protein CorA
FOC06_15845	COG4974	Belongs to the 'phage' integrase family
FOC06_15855	COG0735	belongs to the Fur family
FOC06_15860	COG1300	Membrane
FOC06_15880	COG0667	Aldo Keto reductase
FOC06_15885	COG0656	L-ascorbic acid biosynthetic process
FOC06_15890	COG0456	acetyltransferase
FOC06_15890	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
FOC06_15900	COG4085	toxin activity
FOC06_15900	COG0737	Belongs to the 5'-nucleotidase family
FOC06_15900	COG1525	nuclease
FOC06_15910	COG0596	Alpha beta hydrolase
FOC06_15915	COG2056	Na+-H+ antiporter family
FOC06_15920	COG1609	Transcriptional regulator
FOC06_15925	COG0456	acetyltransferase
FOC06_15930	COG1073	alpha beta
FOC06_15945	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FOC06_15945	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FOC06_15950	COG0307	riboflavin synthase, alpha
FOC06_15970	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
FOC06_15975	COG4106	trans-aconitate 2-methyltransferase activity
FOC06_15980	COG1073	alpha beta
FOC06_15980	COG2226	methyltransferase
FOC06_15985	COG0156	8-amino-7-oxononanoate synthase activity
FOC06_15995	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FOC06_16010	COG0737	Belongs to the 5'-nucleotidase family
FOC06_16020	COG1522	sequence-specific DNA binding
FOC06_16040	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FOC06_16050	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
FOC06_16065	COG0300	oxidoreductase activity
FOC06_16075	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
FOC06_16080	COG1760	l-serine dehydratase
FOC06_16085	COG1760	l-serine dehydratase
FOC06_16100	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
FOC06_16110	COG2195	Cleaves the N-terminal amino acid of tripeptides
FOC06_16115	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC06_16130	COG1376	ErfK ybiS ycfS ynhG family protein
FOC06_16135	COG4129	membrane
FOC06_16140	COG1126	abc transporter atp-binding protein
FOC06_16145	COG0765	amino acid transport
FOC06_16150	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC06_16170	COG0772	Belongs to the SEDS family
FOC06_16175	COG0508	dehydrogenase complex catalyzes the overall conversion of
FOC06_16180	COG0022	dehydrogenase e1 component
FOC06_16185	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
FOC06_16190	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FOC06_16200	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
FOC06_16205	COG0280	phosphate acetyltransferase
FOC06_16210	COG3290	protein histidine kinase activity
FOC06_16210	COG3829	transcription factor binding
FOC06_16220	COG0584	glycerophosphoryl diester phosphodiesterase
FOC06_16225	COG3093	addiction module antidote protein HigA
FOC06_16235	COG0745	RESPONSE REGULATOR receiver
FOC06_16240	COG0750	zinc metalloprotease
FOC06_16245	COG0497	DNA recombination
FOC06_16255	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
FOC06_16265	COG0142	geranyltranstransferase activity
FOC06_16290	COG1302	Protein conserved in bacteria
FOC06_16295	COG0439	Biotin carboxylase
FOC06_16300	COG0511	ligase activity, forming carbon-carbon bonds
FOC06_16345	COG3854	ATPases associated with a variety of cellular activities
FOC06_16370	COG0006	proline dipeptidase activity
FOC06_16385	COG3872	metal-dependent enzyme
FOC06_16395	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FOC06_16415	COG0095	Lipoate-protein ligase
FOC06_16420	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FOC06_16425	COG1609	Transcriptional regulator
FOC06_16435	COG2076	Multidrug Resistance protein
FOC06_16440	COG2076	Multidrug Resistance protein
FOC06_16475	COG1131	(ABC) transporter
FOC06_16480	COG1725	Transcriptional regulator
FOC06_16510	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
FOC06_16565	COG4970	Tfp pilus assembly protein FimT
FOC06_16575	COG1459	type II secretion system
FOC06_16580	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FOC06_16630	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
FOC06_16635	COG1410	methionine synthase
FOC06_16635	COG0646	methionine synthase
FOC06_16640	COG0646	methionine synthase
FOC06_16640	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
FOC06_16645	COG0626	cystathionine gamma-synthase activity
FOC06_16650	COG0626	cystathionine gamma-synthase activity
FOC06_16670	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC06_16680	COG1940	carbohydrate kinase activity
FOC06_16685	COG4483	Protein conserved in bacteria
FOC06_16690	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
FOC06_16700	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
FOC06_16705	COG0704	Plays a role in the regulation of phosphate uptake
FOC06_16710	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
FOC06_16715	COG0581	inorganic phosphate transmembrane transporter activity
FOC06_16720	COG0573	inorganic phosphate transmembrane transporter activity
FOC06_16725	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
FOC06_16735	COG0477	Major facilitator Superfamily
FOC06_16740	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FOC06_16765	COG0735	belongs to the Fur family
FOC06_16770	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FOC06_16775	COG1121	(ABC) transporter
FOC06_16780	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC06_16810	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
FOC06_16815	COG2384	SAM-dependent methyltransferase
FOC06_16820	COG2010	Cytochrome c
FOC06_16825	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FOC06_16830	COG0358	DNA primase activity
FOC06_16845	COG0517	IMP dehydrogenase activity
FOC06_16860	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
FOC06_16865	COG0295	cytidine deaminase activity
FOC06_16870	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
FOC06_16880	COG1480	7TM receptor with intracellular HD hydrolase
FOC06_16885	COG1702	phosphate starvation-inducible protein PhoH
FOC06_16900	COG1610	YqeY-like protein
FOC06_16910	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
FOC06_16915	COG1385	rRNA (uridine-N3-)-methyltransferase activity
FOC06_16935	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
FOC06_16945	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FOC06_16950	COG1733	regulation of RNA biosynthetic process
FOC06_16975	COG1466	dna polymerase III delta subunit
FOC06_16985	COG0658	competence protein
FOC06_16985	COG2333	competence protein COMEC
FOC06_16990	COG2131	deaminase
FOC06_16995	COG1596	polysaccharide export
FOC06_16995	COG1555	photosystem II stabilization
FOC06_17000	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
FOC06_17005	COG2226	methyltransferase
FOC06_17010	COG0799	negative regulation of ribosome biogenesis
FOC06_17015	COG1713	HD superfamily hydrolase involved in NAD metabolism
FOC06_17025	COG1534	Rna-binding protein
FOC06_17035	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
FOC06_17040	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
FOC06_17055	COG1191	sigma factor activity
FOC06_17065	COG1595	DNA-templated transcription, initiation
FOC06_17075	COG0778	Nitroreductase
FOC06_17080	COG2357	RelA SpoT domain protein
FOC06_17090	COG1785	Belongs to the alkaline phosphatase family
FOC06_17100	COG2267	carboxylic ester hydrolase activity
FOC06_17135	COG1404	Belongs to the peptidase S8 family
FOC06_17140	COG3186	Phenylalanine-4-hydroxylase
FOC06_17155	COG2259	Doxx family
FOC06_17195	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FOC06_17205	COG1012	belongs to the aldehyde dehydrogenase family
FOC06_17205	COG1454	alcohol dehydrogenase
FOC06_17210	COG0626	cystathionine gamma-synthase activity
FOC06_17215	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FOC06_17240	COG0768	penicillin binding
FOC06_17270	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
FOC06_17290	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
FOC06_17300	COG0628	permease
FOC06_17320	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
FOC06_17330	COG0482	sulfurtransferase activity
FOC06_17335	COG1104	cysteine desulfurase activity
FOC06_17340	COG1959	2 iron, 2 sulfur cluster binding
FOC06_17345	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
FOC06_17355	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
FOC06_17365	COG0124	histidyl-tRNA synthetase
FOC06_17375	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FOC06_17385	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
FOC06_17385	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
FOC06_17390	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
FOC06_17395	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FOC06_17395	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FOC06_17405	COG2244	polysaccharide biosynthetic process
FOC06_17410	COG2323	membrane
FOC06_17420	COG1862	Preprotein translocase
FOC06_17450	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
FOC06_17460	COG0697	spore germination
FOC06_17465	COG0697	spore germination
FOC06_17470	COG0640	Transcriptional regulator
FOC06_17495	COG0157	Belongs to the NadC ModD family
FOC06_17500	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
FOC06_17505	COG1104	cysteine desulfurase activity
FOC06_17510	COG1827	regulation of RNA biosynthetic process
FOC06_17515	COG2258	MOSC domain
FOC06_17520	COG0077	Prephenate dehydratase
FOC06_17525	COG0577	efflux transmembrane transporter activity
FOC06_17530	COG0577	efflux transmembrane transporter activity
FOC06_17535	COG1136	(ABC) transporter
FOC06_17545	COG0745	RESPONSE REGULATOR receiver
FOC06_17550	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
FOC06_17565	COG2868	ribosomal protein
FOC06_17575	COG1530	ribonuclease E activity
FOC06_17580	COG1994	Peptidase M50
FOC06_17585	COG0739	heme binding
FOC06_17590	COG2894	cell division
FOC06_17605	COG1792	Involved in formation and maintenance of cell shape
FOC06_17610	COG1077	Cell shape determining protein MreB Mrl
FOC06_17630	COG0285	dihydrofolate synthase activity
FOC06_17635	COG0525	valine-tRNA ligase activity
FOC06_17645	COG1388	LysM domain
FOC06_17655	COG0113	porphobilinogen synthase activity
FOC06_17660	COG1587	Uroporphyrinogen-III synthase
FOC06_17670	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FOC06_17680	COG1846	Transcriptional regulator
FOC06_17685	COG1764	response to oxidative stress
FOC06_17700	COG1067	ATP-dependent peptidase activity
FOC06_17700	COG0470	DNA polymerase III
FOC06_17745	COG0622	Phosphoesterase
FOC06_17750	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
FOC06_17760	COG5401	PFAM Sporulation and spore germination
FOC06_17780	COG1309	transcriptional regulator
FOC06_17795	COG2197	response regulator
FOC06_17800	COG2233	PERMEase
FOC06_17810	COG0402	S-adenosylhomocysteine deaminase activity
FOC06_17815	COG0402	S-adenosylhomocysteine deaminase activity
FOC06_17835	COG0444	Belongs to the ABC transporter superfamily
FOC06_17840	COG4608	Belongs to the ABC transporter superfamily
FOC06_17850	COG3279	Response regulator of the LytR AlgR family
FOC06_17865	COG1983	PspC domain protein
FOC06_17870	COG1396	sequence-specific DNA binding
FOC06_17875	COG0697	spore germination
FOC06_17885	COG1959	2 iron, 2 sulfur cluster binding
FOC06_17890	COG1668	transmembrane transport
FOC06_17895	COG4152	abc transporter atp-binding protein
FOC06_17900	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
FOC06_17910	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
FOC06_17915	COG1876	peptidase activity
FOC06_17920	COG0824	Thioesterase
FOC06_17925	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
FOC06_17930	COG1053	succinate dehydrogenase
FOC06_17935	COG2009	succinate dehydrogenase
FOC06_17940	COG1719	4-vinyl reductase, 4VR
FOC06_17950	COG3118	belongs to the thioredoxin family
FOC06_17955	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
FOC06_17960	COG2086	electron transfer activity
FOC06_17965	COG1024	Enoyl-CoA hydratase
FOC06_17970	COG1309	transcriptional regulator
FOC06_17975	COG0318	PFAM AMP-dependent synthetase and ligase
FOC06_17995	COG2318	DinB family
FOC06_18020	COG1131	(ABC) transporter
FOC06_18025	COG2205	protein histidine kinase activity
FOC06_18030	COG0745	RESPONSE REGULATOR receiver
FOC06_18035	COG4895	conserved protein (DUF2196)
FOC06_18040	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
FOC06_18055	COG4509	Sortase family
FOC06_18060	COG1120	ATPase activity
FOC06_18075	COG5386	Cell surface protein
FOC06_18085	COG5386	Cell surface protein
FOC06_18090	COG1114	Component of the transport system for branched-chain amino acids
FOC06_18095	COG1187	pseudouridine synthase activity
FOC06_18105	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
FOC06_18105	COG1796	DNA polymerase
FOC06_18110	COG1286	toxin biosynthetic process
FOC06_18140	COG0017	Asparaginyl-tRNA synthetase
FOC06_18145	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOC06_18145	COG0072	phenylalanine-tRNA ligase activity
FOC06_18155	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FOC06_18165	COG1418	mRNA catabolic process
FOC06_18190	COG2814	Major facilitator Superfamily
FOC06_18195	COG1566	PFAM secretion protein HlyD family protein
FOC06_18200	COG1309	transcriptional regulator
FOC06_18205	COG1363	Peptidase, m42
FOC06_18225	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
FOC06_18230	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
FOC06_18240	COG1484	DNA-dependent DNA replication
FOC06_18245	COG3611	Membrane attachment protein
FOC06_18255	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
FOC06_18265	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FOC06_18270	COG0237	dephospho-CoA kinase activity
FOC06_18275	COG1971	Probably functions as a manganese efflux pump
FOC06_18280	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
FOC06_18285	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FOC06_18285	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FOC06_18290	COG5002	protein histidine kinase activity
FOC06_18295	COG0745	RESPONSE REGULATOR receiver
FOC06_18310	COG0538	isocitrate dehydrogenase activity
FOC06_18315	COG0372	Belongs to the citrate synthase family
FOC06_18325	COG0628	permease
FOC06_18330	COG3030	protein affecting phage T7 exclusion by the F plasmid
FOC06_18355	COG1725	Transcriptional regulator
FOC06_18360	COG0281	malic enzyme
FOC06_18365	COG0587	DNA-directed DNA polymerase activity
FOC06_18380	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
FOC06_18400	COG4109	DRTGG domain
FOC06_18410	COG0006	proline dipeptidase activity
FOC06_18445	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC06_18450	COG0662	Cupin 2, conserved barrel domain protein
FOC06_18460	COG1476	TRANSCRIPTIONal
FOC06_18475	COG1028	Short-chain dehydrogenase reductase Sdr
FOC06_18480	COG0589	response to stress
FOC06_18520	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC06_18540	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
FOC06_18545	COG0827	DNA restriction-modification system
FOC06_18550	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
FOC06_18555	COG3874	Sporulation protein YtfJ
FOC06_18565	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
FOC06_18570	COG1574	metal-dependent hydrolase with the TIM-barrel fold
FOC06_18580	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FOC06_18595	COG1104	cysteine desulfurase activity
FOC06_18605	COG0583	DNA-binding transcription factor activity
FOC06_18610	COG0697	spore germination
FOC06_18620	COG1956	GAF domain-containing protein
FOC06_18625	COG0626	cystathionine gamma-synthase activity
FOC06_18645	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
FOC06_18655	COG1595	DNA-templated transcription, initiation
FOC06_18670	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FOC06_18675	COG0454	-acetyltransferase
FOC06_18680	COG0517	IMP dehydrogenase activity
FOC06_18685	COG0123	including yeast histone deacetylase and acetoin utilization protein
FOC06_18695	COG0745	RESPONSE REGULATOR receiver
FOC06_18705	COG0666	response to abiotic stimulus
FOC06_18740	COG1609	Transcriptional regulator
FOC06_18745	COG4851	CamS sex pheromone cAM373 precursor
FOC06_18750	COG3118	belongs to the thioredoxin family
FOC06_18760	COG2309	aminopeptidase activity
FOC06_18780	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC06_18795	COG1674	ftsk spoiiie
FOC06_18805	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOC06_18810	COG4848	Belongs to the UPF0354 family
FOC06_18815	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC06_18820	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
FOC06_18825	COG1363	Peptidase, m42
FOC06_18835	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC06_18850	COG0510	thiamine kinase activity
FOC06_18855	COG1523	belongs to the glycosyl hydrolase 13 family
FOC06_18870	COG1349	DNA-binding transcription factor activity
FOC06_18875	COG1187	pseudouridine synthase activity
FOC06_18880	COG2244	polysaccharide biosynthetic process
FOC06_18885	COG2081	HI0933 family
FOC06_18890	COG2814	Major facilitator Superfamily
FOC06_18900	COG3832	glyoxalase III activity
FOC06_18920	COG1329	Transcriptional regulator
FOC06_18930	COG4975	Glucose uptake
FOC06_18945	COG0314	molybdopterin synthase activity
FOC06_18950	COG1763	Mo-molybdopterin cofactor biosynthetic process
FOC06_18955	COG0303	'Molybdopterin
FOC06_18965	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FOC06_18990	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FOC06_19000	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FOC06_19045	COG2814	Major facilitator Superfamily
FOC06_19050	COG0475	glutathione-regulated potassium exporter activity
FOC06_19055	COG0490	domain, Protein
FOC06_19060	COG0582	viral genome integration into host DNA
FOC06_19070	COG1136	(ABC) transporter
FOC06_19090	COG1242	4 iron, 4 sulfur cluster binding
FOC06_19095	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
FOC06_19100	COG1131	(ABC) transporter
FOC06_19110	COG1794	racemase activity, acting on amino acids and derivatives
FOC06_19130	COG2267	carboxylic ester hydrolase activity
FOC06_19135	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
FOC06_19140	COG0671	phosphoesterase, PA-phosphatase related
FOC06_19145	COG0438	transferase activity, transferring glycosyl groups
FOC06_19155	COG0521	Mo-molybdopterin cofactor biosynthetic process
FOC06_19210	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
FOC06_19215	COG5002	protein histidine kinase activity
FOC06_19220	COG4191	Histidine kinase
FOC06_19225	COG2267	carboxylic ester hydrolase activity
FOC06_19245	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FOC06_19250	COG1116	anion transmembrane transporter activity
FOC06_19255	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC06_19280	COG0494	nUDIX hydrolase
FOC06_19310	COG0288	reversible hydration of carbon dioxide
FOC06_19315	COG1271	oxidase subunit
FOC06_19320	COG1294	oxidase, subunit
FOC06_19340	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC06_19365	COG1842	Phage shock protein A
FOC06_19400	COG5002	protein histidine kinase activity
FOC06_19405	COG0745	RESPONSE REGULATOR receiver
FOC06_19435	COG1597	lipid kinase activity
FOC06_19470	COG0586	Pfam SNARE associated Golgi protein
FOC06_19480	COG0577	efflux transmembrane transporter activity
FOC06_19485	COG1136	(ABC) transporter
FOC06_19490	COG3708	Transcriptional regulator
FOC06_19490	COG2207	Transcriptional regulator
FOC06_19495	COG0745	RESPONSE REGULATOR receiver
FOC06_19500	COG2205	protein histidine kinase activity
FOC06_19510	COG0577	efflux transmembrane transporter activity
FOC06_19515	COG1136	(ABC) transporter
FOC06_19555	COG3964	amidohydrolase
FOC06_19585	COG4948	Mandelate Racemase Muconate Lactonizing
FOC06_19595	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
FOC06_19600	COG0596	Alpha beta hydrolase
FOC06_19605	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
FOC06_19610	COG1169	isochorismate synthase
FOC06_19615	COG1575	Belongs to the MenA family. Type 1 subfamily
FOC06_19620	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
FOC06_19625	COG1278	Cold shock
FOC06_19640	COG0058	SHG alpha-glucan phosphorylase activity
FOC06_19645	COG0297	glycogen (starch) synthase activity
FOC06_19650	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
FOC06_19655	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
FOC06_19675	COG0039	L-malate dehydrogenase activity
FOC06_19770	COG0544	peptidyl-prolyl cis-trans isomerase activity
FOC06_19805	COG1285	pathogenesis
FOC06_19810	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FOC06_19820	COG0166	Belongs to the GPI family
FOC06_19825	COG2155	Conserved Protein
FOC06_19830	COG1098	S1 RNA binding domain
FOC06_19835	COG0436	Aminotransferase
FOC06_19840	COG1522	sequence-specific DNA binding
FOC06_19845	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FOC06_19850	COG2267	carboxylic ester hydrolase activity
FOC06_19860	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
FOC06_19875	COG5018	Exonuclease
FOC06_19880	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
FOC06_19895	COG0423	glycine-tRNA ligase activity
FOC06_19900	COG2050	protein possibly involved in aromatic compounds catabolism
FOC06_19910	COG1268	BioY protein
FOC06_19920	COG1210	Utp--glucose-1-phosphate uridylyltransferase
FOC06_19925	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FOC06_19940	COG3584	3D domain protein
FOC06_19955	COG1252	NADH dehydrogenase
FOC06_19970	COG3708	Transcriptional regulator
FOC06_19985	COG1683	Conserved Protein
FOC06_20005	COG0316	Belongs to the HesB IscA family
FOC06_20020	COG1252	NADH dehydrogenase
FOC06_20035	COG0390	transport system, permease component
FOC06_20040	COG2824	Alkylphosphonate utilization operon protein PhnA
FOC06_20080	COG4837	Protein of unknown function (DUF1462)
FOC06_20085	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
FOC06_20095	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
FOC06_20100	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
FOC06_20110	COG2249	NAD(P)H dehydrogenase (quinone) activity
FOC06_20115	COG0647	UMP catabolic process
FOC06_20125	COG2445	Protein of unknown function DUF86
FOC06_20130	COG1494	fructose-1,6-bisphosphatase
FOC06_20145	COG4470	Protein conserved in bacteria
FOC06_20155	COG0789	Transcriptional regulator
FOC06_20160	COG4377	Putative membrane peptidase family (DUF2324)
FOC06_20185	COG0739	heme binding
FOC06_20195	COG3377	Domain of unknown function (DUF1805)
FOC06_20200	COG0737	Belongs to the 5'-nucleotidase family
FOC06_20210	COG1695	Transcriptional regulator
FOC06_20220	COG0719	Fe-S assembly protein
FOC06_20225	COG0822	iron-sulfur transferase activity
FOC06_20230	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
FOC06_20235	COG0719	Fe-S assembly protein
FOC06_20240	COG0396	ATPase activity
FOC06_20245	COG1464	Belongs to the NlpA lipoprotein family
FOC06_20250	COG1464	Belongs to the NlpA lipoprotein family
FOC06_20255	COG2011	ABC-type metal ion transport system permease component
FOC06_20260	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FOC06_20270	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC06_20275	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
FOC06_20290	COG1393	Belongs to the ArsC family
FOC06_20335	COG0039	L-malate dehydrogenase activity
FOC06_20355	COG1309	transcriptional regulator
FOC06_20360	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC06_20365	COG1960	acyl-CoA dehydrogenase activity
FOC06_20370	COG0183	Belongs to the thiolase family
FOC06_20375	COG1024	Enoyl-CoA hydratase
FOC06_20375	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC06_20385	COG1686	Belongs to the peptidase S11 family
FOC06_20400	COG0011	TIGRFAM Protein of
FOC06_20405	COG0840	transmembrane signaling receptor activity
FOC06_20420	COG2814	Major facilitator Superfamily
FOC06_20425	COG0531	amino acid
FOC06_20435	COG0706	membrane insertase activity
FOC06_20445	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC06_20480	COG0586	Pfam SNARE associated Golgi protein
FOC06_20490	COG1376	ErfK ybiS ycfS ynhG family protein
FOC06_20495	COG0745	RESPONSE REGULATOR receiver
FOC06_20500	COG5002	protein histidine kinase activity
FOC06_20510	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOC06_20525	COG2151	metal-sulfur cluster biosynthetic enzyme
FOC06_20530	COG3227	Zinc metalloprotease (Elastase)
FOC06_20535	COG1741	Belongs to the pirin family
FOC06_20550	COG0475	glutathione-regulated potassium exporter activity
FOC06_20555	COG0490	domain, Protein
FOC06_20560	COG1115	amino acid carrier protein
FOC06_20565	COG0783	Belongs to the Dps family
FOC06_20580	COG1611	Belongs to the LOG family
FOC06_20600	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FOC06_20605	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FOC06_20610	COG1115	amino acid carrier protein
FOC06_20615	COG1115	amino acid carrier protein
FOC06_20620	COG2910	NAD(P)H-binding
FOC06_20635	COG0656	L-ascorbic acid biosynthetic process
FOC06_20640	COG2814	Major facilitator Superfamily
FOC06_20645	COG1733	regulation of RNA biosynthetic process
FOC06_20655	COG1252	NADH dehydrogenase
FOC06_20660	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
FOC06_20665	COG0812	UDP-N-acetylmuramate dehydrogenase activity
FOC06_20675	COG3290	protein histidine kinase activity
FOC06_20675	COG0840	transmembrane signaling receptor activity
FOC06_20685	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
FOC06_20690	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
FOC06_20705	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC06_20710	COG3223	Belongs to the PsiE family
FOC06_20760	COG0557	exoribonuclease II activity
FOC06_20765	COG1647	Serine aminopeptidase, S33
FOC06_20770	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FOC06_20775	COG1346	cytolysis
FOC06_20870	COG4695	Portal protein
FOC06_20895	COG4974	Belongs to the 'phage' integrase family
FOC06_20905	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
FOC06_20910	COG0149	triose-phosphate isomerase activity
FOC06_20920	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FOC06_20935	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
FOC06_20960	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FOC06_20975	COG2323	membrane
FOC06_20980	COG0740	serine-type endopeptidase activity
FOC06_20985	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOC06_20995	COG0391	Required for morphogenesis under gluconeogenic growth conditions
FOC06_21005	COG1051	belongs to the nudix hydrolase family
FOC06_21015	COG0492	ferredoxin-NADP+ reductase activity
FOC06_21020	COG0457	Tetratricopeptide repeat
FOC06_21025	COG0110	maltose O-acetyltransferase activity
FOC06_21045	COG1950	PFAM Membrane protein of
FOC06_21055	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
FOC06_21060	COG0556	nucleotide-excision repair
FOC06_21080	COG0789	Transcriptional regulator
FOC06_21105	COG2855	membrane
FOC06_21110	COG0583	DNA-binding transcription factor activity
FOC06_21120	COG0655	NAD(P)H dehydrogenase (quinone) activity
FOC06_21135	COG1132	(ABC) transporter
FOC06_21140	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FOC06_21145	COG3409	Peptidoglycan-binding domain 1 protein
FOC06_21145	COG0793	Belongs to the peptidase S41A family
FOC06_21150	COG2177	Part of the ABC transporter FtsEX involved in
FOC06_21155	COG2884	Cell division ATP-binding protein ftsE
FOC06_21175	COG0653	protein targeting
FOC06_21180	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
FOC06_21185	COG1278	Cold shock
FOC06_21190	COG1040	competence protein
FOC06_21195	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
FOC06_21200	COG0791	NLP P60 protein
FOC06_21200	COG1388	LysM domain
FOC06_21205	COG1733	regulation of RNA biosynthetic process
FOC06_21210	COG1307	EDD domain protein, DegV family
FOC06_21215	COG1739	Uncharacterized protein family UPF0029
FOC06_21220	COG1316	TRANSCRIPTIONal
FOC06_21225	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
FOC06_21230	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
FOC06_21235	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FOC06_21245	COG3933	PFAM sigma-54 factor interaction domain-containing protein
FOC06_21245	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
FOC06_21260	COG3394	polysaccharide catabolic process
FOC06_21265	COG1486	melibiose metabolic process
FOC06_21270	COG1447	Phosphotransferase system cellobiose-specific component IIA
FOC06_21275	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FOC06_21285	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
FOC06_21290	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
FOC06_21295	COG1447	Phosphotransferase system cellobiose-specific component IIA
FOC06_21305	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FOC06_21310	COG1301	dicarboxylic acid transport
FOC06_21320	COG0346	lactoylglutathione lyase activity
FOC06_21325	COG1511	domain protein
FOC06_21330	COG0583	DNA-binding transcription factor activity
FOC06_21335	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
FOC06_21350	COG1271	oxidase subunit
FOC06_21355	COG1294	oxidase, subunit
FOC06_21360	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
FOC06_21370	COG1620	l-lactate permease
FOC06_21380	COG2389	metal-binding protein
FOC06_21390	COG1368	sulfuric ester hydrolase activity
FOC06_21405	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FOC06_21420	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FOC06_21425	COG1388	LysM domain
FOC06_21425	COG3584	3D domain protein
FOC06_21450	COG4715	Zinc finger, swim domain protein
FOC06_21455	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
FOC06_21485	COG1191	sigma factor activity
FOC06_21495	COG0577	efflux transmembrane transporter activity
FOC06_21500	COG1136	(ABC) transporter
FOC06_21535	COG5002	protein histidine kinase activity
FOC06_21540	COG0745	RESPONSE REGULATOR receiver
FOC06_21545	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FOC06_21560	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
FOC06_21565	COG1134	teichoic acid transport
FOC06_21570	COG1682	transport, permease protein
FOC06_21575	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
FOC06_21620	COG1609	Transcriptional regulator
FOC06_21635	COG0739	heme binding
FOC06_21655	COG2385	sporulation resulting in formation of a cellular spore
FOC06_21660	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
FOC06_21670	COG4836	Membrane
FOC06_21675	COG1007	ATP synthesis coupled electron transport
FOC06_21680	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FOC06_21685	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
FOC06_21695	COG0839	Belongs to the complex I subunit 6 family
FOC06_21710	COG0649	NAD binding
FOC06_21715	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FOC06_21725	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FOC06_21730	COG3300	MHYT domain
FOC06_21730	COG5001	Diguanylate cyclase
FOC06_21780	COG0356	it plays a direct role in the translocation of protons across the membrane
FOC06_21815	COG0698	ribose 5-phosphate isomerase
FOC06_21825	COG2190	(PTS) system
FOC06_21830	COG2259	Doxx family
FOC06_21835	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FOC06_21850	COG0009	L-threonylcarbamoyladenylate synthase
FOC06_21865	COG2890	protein-(glutamine-N5) methyltransferase activity
FOC06_21870	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
FOC06_21885	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
FOC06_21890	COG1494	fructose-1,6-bisphosphatase
FOC06_21895	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
FOC06_21910	COG4821	SIS domain
FOC06_21920	COG3343	RNA polymerase activity
FOC06_21930	COG1960	acyl-CoA dehydrogenase activity
FOC06_21935	COG1960	acyl-CoA dehydrogenase activity
FOC06_21940	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC06_21945	COG0183	Belongs to the thiolase family
FOC06_21950	COG0247	lactate metabolic process
FOC06_21950	COG2181	nitrate reductase activity
FOC06_21955	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FOC06_21965	COG3300	MHYT domain
FOC06_21965	COG5001	Diguanylate cyclase
FOC06_21985	COG2197	response regulator
FOC06_21990	COG4585	Histidine kinase
FOC06_21995	COG0842	Transport permease protein
FOC06_22000	COG1131	(ABC) transporter
FOC06_22005	COG0024	Methionine aminopeptidase
FOC06_22015	COG2234	aminopeptidase activity
FOC06_22035	COG1595	DNA-templated transcription, initiation
FOC06_22040	COG0018	arginyl-trna synthetase
FOC06_22045	COG4506	Protein conserved in bacteria
FOC06_22050	COG1619	proteins homologs of microcin C7 resistance protein MccF
FOC06_22065	COG0010	Belongs to the arginase family
FOC06_22070	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
FOC06_22075	COG2814	Major facilitator Superfamily
FOC06_22080	COG0789	Transcriptional regulator
FOC06_22085	COG0584	glycerophosphoryl diester phosphodiesterase
FOC06_22090	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FOC06_22100	COG1994	Peptidase M50
FOC06_22110	COG1078	dGTPase activity
FOC06_22115	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FOC06_22120	COG1120	ATPase activity
FOC06_22125	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC06_22150	COG0095	Lipoate-protein ligase
FOC06_22155	COG0280	phosphate acetyltransferase
FOC06_22170	COG3773	Cell wall hydrolase
FOC06_22180	COG2363	Small membrane protein
FOC06_22195	COG2233	PERMEase
FOC06_22200	COG0561	phosphatase activity
FOC06_22205	COG2814	Major facilitator Superfamily
FOC06_22215	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
FOC06_22220	COG1131	(ABC) transporter
FOC06_22225	COG2755	lipolytic protein G-D-S-L family
FOC06_22230	COG1609	Transcriptional regulator
FOC06_22240	COG0460	homoserine dehydrogenase
FOC06_22260	COG1011	Hydrolase
FOC06_22265	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FOC06_22275	COG2197	response regulator
FOC06_22285	COG0351	phosphomethylpyrimidine kinase
FOC06_22290	COG3706	GGDEF domain
FOC06_22295	COG2879	small protein
FOC06_22300	COG1966	Carbon starvation protein
FOC06_22305	COG3279	Response regulator of the LytR AlgR family
FOC06_22310	COG0477	Major facilitator Superfamily
FOC06_22335	COG0840	transmembrane signaling receptor activity
FOC06_22345	COG1607	acyl-coa hydrolase
FOC06_22360	COG0488	(ABC) transporter
FOC06_22380	COG0463	Glycosyl transferase, family 2
FOC06_22385	COG1309	transcriptional regulator
FOC06_22390	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOC06_22395	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FOC06_22395	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FOC06_22400	COG0628	permease
FOC06_22415	COG3279	Response regulator of the LytR AlgR family
FOC06_22420	COG3275	phosphorelay sensor kinase activity
FOC06_22425	COG2814	Major facilitator Superfamily
FOC06_22430	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FOC06_22435	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
FOC06_22440	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FOC06_22460	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FOC06_22465	COG1272	protein, Hemolysin III
FOC06_22485	COG0516	GMP reductase activity
FOC06_22490	COG1164	Oligoendopeptidase f
FOC06_22510	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FOC06_22515	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
FOC06_22520	COG4853	Protein conserved in bacteria
FOC06_22525	COG4863	YycH protein
FOC06_22530	COG5002	protein histidine kinase activity
FOC06_22535	COG0745	RESPONSE REGULATOR receiver
FOC06_22565	COG0305	Participates in initiation and elongation during chromosome replication
FOC06_22575	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
FOC06_22580	COG4241	membrane
FOC06_22590	COG0629	single-stranded DNA binding
FOC06_22600	COG0012	GTP binding
FOC06_22605	COG4481	Protein conserved in bacteria
FOC06_22610	COG0668	transmembrane transport
FOC06_22620	COG1475	DNA binding
FOC06_22625	COG1192	Involved in chromosome partitioning
FOC06_22645	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
FOC06_22650	COG1847	R3H domain protein
FOC06_22655	COG0706	membrane insertase activity
FOC06_22675	COG0592	DNA-directed DNA polymerase activity
FOC06_22680	COG2501	S4 domain
FOC06_22690	COG0187	DNA topoisomerase II activity
FOC06_22695	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
FOC06_22730	COG0517	IMP dehydrogenase activity
FOC06_22730	COG0516	GMP reductase activity
FOC06_22735	COG1686	Belongs to the peptidase S11 family
FOC06_22765	COG1428	Deoxynucleoside kinase
FOC06_22770	COG1428	Deoxynucleoside kinase
FOC06_22775	COG1335	isochorismatase
FOC06_22780	COG0590	tRNA wobble adenosine to inosine editing
FOC06_22790	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
FOC06_22845	COG1982	Orn Lys Arg decarboxylase major
FOC06_22855	COG0470	DNA polymerase III
FOC06_22860	COG1774	PSP1 C-terminal conserved region
FOC06_22870	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
FOC06_22880	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
FOC06_22885	COG2002	toxin-antitoxin pair type II binding
FOC06_22890	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOC06_22890	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOC06_22895	COG0084	hydrolase, TatD family'
FOC06_22900	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
FOC06_22915	COG4466	Protein conserved in bacteria
FOC06_22930	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
FOC06_22935	COG0251	oxidation-reduction process
FOC06_22950	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
FOC06_22955	COG0193	aminoacyl-tRNA hydrolase activity
FOC06_22965	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
FOC06_22970	COG2002	toxin-antitoxin pair type II binding
FOC06_22975	COG2244	polysaccharide biosynthetic process
FOC06_22980	COG3956	TIGRFAM MazG family protein
FOC06_22985	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
FOC06_23005	COG1098	S1 RNA binding domain
FOC06_23020	COG2208	phosphoserine phosphatase activity
FOC06_23025	COG0037	tRNA processing
FOC06_23035	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FOC06_23050	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FOC06_23055	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
FOC06_23060	COG0512	Glutamine amidotransferase of anthranilate synthase
FOC06_23065	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FOC06_23070	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
FOC06_23075	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
FOC06_23080	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
FOC06_23085	COG1396	sequence-specific DNA binding
FOC06_23090	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FOC06_23120	COG3880	PFAM UvrB UvrC protein
FOC06_23130	COG0542	response to heat
FOC06_23135	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
FOC06_23145	COG4956	integral membrane protein (PIN domain superfamily)
FOC06_23165	COG1045	serine acetyltransferase
FOC06_23180	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FOC06_23185	COG3688	RNA-binding protein containing a PIN domain
FOC06_23195	COG0267	Belongs to the bacterial ribosomal protein bL33 family
FOC06_23200	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FOC06_23205	COG0250	Participates in transcription elongation, termination and antitermination
FOC06_23230	COG2813	Specifically methylates the guanine in position
FOC06_23240	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
FOC06_23245	COG1358	cellular component organization or biogenesis
FOC06_23350	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
FOC06_23375	COG0201	protein transport
FOC06_23385	COG0024	Methionine aminopeptidase
FOC06_23395	COG0257	Belongs to the bacterial ribosomal protein bL36 family
FOC06_23425	COG1122	ATPase activity
FOC06_23430	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
FOC06_23435	COG0101	tRNA pseudouridine synthase activity
FOC06_23455	COG0860	N-Acetylmuramoyl-L-alanine amidase
FOC06_23460	COG0489	protein tyrosine kinase activity
FOC06_23470	COG2194	sulfuric ester hydrolase activity
FOC06_23475	COG0726	polysaccharide deacetylase
FOC06_23555	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
FOC06_23560	COG4856	YbbR-like protein
FOC06_23575	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
FOC06_23580	COG0596	Alpha beta hydrolase
FOC06_23600	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
FOC06_23605	COG1506	peptidase
FOC06_23605	COG4946	Tricorn protease homolog
FOC06_23605	COG0823	Involved in the tonB-independent uptake of proteins
FOC06_23640	COG2011	ABC-type metal ion transport system permease component
FOC06_23645	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FOC06_23650	COG1464	Belongs to the NlpA lipoprotein family
FOC06_23665	COG0277	FAD linked oxidase domain protein
FOC06_23670	COG2271	Major facilitator Superfamily
FOC06_23680	COG2814	Major facilitator Superfamily
FOC06_23695	COG0601	transmembrane transport
FOC06_23700	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC06_23705	COG0444	Belongs to the ABC transporter superfamily
FOC06_23710	COG4608	Belongs to the ABC transporter superfamily
FOC06_23715	COG4166	transmembrane transport
FOC06_23725	COG2207	Transcriptional regulator
FOC06_23740	COG4166	transmembrane transport
FOC06_23745	COG4166	transmembrane transport
FOC06_23750	COG0656	L-ascorbic acid biosynthetic process
FOC06_23755	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
FOC06_23765	COG4975	Glucose uptake
FOC06_23770	COG4149	molybdate abc transporter
FOC06_23780	COG1910	domain protein
FOC06_23790	COG0583	DNA-binding transcription factor activity
FOC06_23795	COG0697	spore germination
FOC06_23810	COG0204	Acyl-transferase
FOC06_23820	COG1609	Transcriptional regulator
FOC06_23830	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC06_23840	COG0084	hydrolase, TatD family'
FOC06_23845	COG5298	Protein conserved in bacteria
FOC06_23870	COG0488	(ABC) transporter
FOC06_23885	COG0747	negative chemotaxis
FOC06_23890	COG0601	transmembrane transport
FOC06_23900	COG0444	Belongs to the ABC transporter superfamily
FOC06_23905	COG4608	Belongs to the ABC transporter superfamily
FOC06_23925	COG3185	4-Hydroxyphenylpyruvate dioxygenase
FOC06_23930	COG0179	Fumarylacetoacetate (FAA) hydrolase
FOC06_23940	COG2814	Major facilitator Superfamily
FOC06_23950	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
FOC06_23960	COG4294	response to UV
FOC06_23965	COG0457	Tetratricopeptide repeat
FOC06_23965	COG0705	Rhomboid family
FOC06_23975	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
FOC06_23980	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FOC06_23985	COG0864	Transcriptional regulator
FOC06_23990	COG2337	Toxic component of a toxin-antitoxin (TA) module
FOC06_23995	COG2183	response to ionizing radiation
FOC06_24090	COG0802	atpase or kinase
FOC06_24095	COG1214	PFAM Peptidase M22, glycoprotease
FOC06_24100	COG0456	acetyltransferase
FOC06_24105	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
FOC06_24110	COG0488	(ABC) transporter
FOC06_24125	COG1266	CAAX protease self-immunity
FOC06_24145	COG2252	PERMEase
FOC06_24155	COG5002	protein histidine kinase activity
FOC06_24185	COG2226	methyltransferase
FOC06_24225	COG1968	undecaprenyl-diphosphatase activity
FOC06_24240	COG2205	protein histidine kinase activity
FOC06_24245	COG0745	RESPONSE REGULATOR receiver
FOC06_24265	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
FOC06_24270	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
FOC06_24275	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
FOC06_24285	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
FOC06_24300	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
FOC06_24310	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
FOC06_24320	COG0151	Belongs to the GarS family
FOC06_24345	COG0210	DNA helicase
FOC06_24355	COG4851	CamS sex pheromone cAM373 precursor
FOC06_24370	COG1335	isochorismatase
FOC06_24375	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FOC06_24380	COG2011	ABC-type metal ion transport system permease component
FOC06_24385	COG1464	Belongs to the NlpA lipoprotein family
FOC06_24405	COG1846	Transcriptional regulator
FOC06_24430	COG1597	lipid kinase activity
FOC06_24435	COG0546	phosphoglycolate phosphatase activity
FOC06_24440	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FOC06_24450	COG1012	belongs to the aldehyde dehydrogenase family
FOC06_24455	COG2076	Multidrug Resistance protein
FOC06_24460	COG2309	aminopeptidase activity
FOC06_24475	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FOC06_24480	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FOC06_24485	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FOC06_24495	COG4807	Protein conserved in bacteria
FOC06_24525	COG1473	amidohydrolase
FOC06_24540	COG0450	alkyl hydroperoxide reductase
FOC06_24545	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
FOC06_24555	COG0235	Class ii aldolase
FOC06_24560	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC06_24565	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC06_24570	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FOC06_24585	COG0166	Belongs to the GPI family
FOC06_24620	COG5002	protein histidine kinase activity
FOC06_24640	COG3541	Predicted nucleotidyltransferase
FOC06_24645	COG2814	Major facilitator Superfamily
FOC06_24650	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC06_24650	COG0723	plastoquinol--plastocyanin reductase activity
FOC06_24660	COG0765	amino acid transport
FOC06_24665	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC06_24675	COG0840	transmembrane signaling receptor activity
FOC06_24680	COG0840	transmembrane signaling receptor activity
FOC06_24685	COG0366	Alpha amylase catalytic
FOC06_24690	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOC06_24690	COG1263	PTS System
FOC06_24690	COG2190	(PTS) system
FOC06_24720	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
FOC06_24735	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC06_24745	COG1116	anion transmembrane transporter activity
FOC06_24750	COG0488	(ABC) transporter
FOC06_24795	COG2270	Major facilitator Superfamily
FOC06_24810	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
FOC06_24825	COG2310	stress, protein
FOC06_24830	COG2310	stress, protein
FOC06_24835	COG2310	stress, protein
FOC06_24840	COG0861	Integral membrane protein TerC family
FOC06_24850	COG3853	Toxic anion resistance protein (TelA)
FOC06_24865	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FOC06_24875	COG1295	ribonuclease BN
FOC06_24880	COG2217	Heavy metal translocating P-type atpase
FOC06_24885	COG0697	spore germination
FOC06_24905	COG0586	Pfam SNARE associated Golgi protein
FOC06_24920	COG3871	stress protein (general stress protein 26)
FOC06_24925	COG0387	Pfam Sodium calcium exchanger
FOC06_24935	COG0535	radical SAM domain protein
FOC06_24960	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
FOC06_24965	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FOC06_24970	COG0582	viral genome integration into host DNA
FOC06_24975	COG1396	sequence-specific DNA binding
FOC06_24990	COG1396	sequence-specific DNA binding
FOC06_25025	COG1484	DNA-dependent DNA replication
FOC06_25110	COG0582	viral genome integration into host DNA
FOC06_25115	COG0582	viral genome integration into host DNA
FOC06_25235	COG0101	tRNA pseudouridine synthase activity
FOC06_25245	COG3829	transcription factor binding
FOC06_25255	COG0833	amino acid
FOC06_25260	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FOC06_25280	COG2066	Belongs to the glutaminase family
FOC06_25285	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOC06_25285	COG1263	PTS System
FOC06_25290	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FOC06_25305	COG0463	Glycosyl transferase, family 2
FOC06_25320	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
FOC06_25320	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FOC06_25340	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FOC06_25360	COG1228	amidohydrolase
FOC06_25365	COG1090	epimerase
FOC06_25395	COG1988	membrane-bound metal-dependent
FOC06_25400	COG1194	a g-specific adenine glycosylase
FOC06_25425	COG1132	(ABC) transporter
FOC06_25430	COG4129	membrane
FOC06_25435	COG0070	glutamate synthase
FOC06_25435	COG0069	glutamate synthase activity
FOC06_25435	COG0067	glutamate synthase
FOC06_25445	COG4555	ABC transporter
FOC06_25465	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
FOC06_25470	COG0735	belongs to the Fur family
FOC06_25585	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
FOC06_25590	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FOC06_25600	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
FOC06_25610	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
FOC06_25620	COG2766	serine protein kinase
FOC06_25640	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FOC06_25650	COG1585	Membrane protein implicated in regulation of membrane protease activity
FOC06_25655	COG2268	Band 7 protein
FOC06_25665	COG3290	protein histidine kinase activity
FOC06_25675	COG2851	Citrate transporter
FOC06_25695	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
FOC06_25700	COG3842	ATPase activity
FOC06_25705	COG1175	transmembrane transport
FOC06_25710	COG0395	ABC-type sugar transport system, permease component
FOC06_25720	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
FOC06_25725	COG0745	RESPONSE REGULATOR receiver
FOC06_25730	COG5002	protein histidine kinase activity
FOC06_25740	COG4990	cell redox homeostasis
FOC06_25750	COG3290	protein histidine kinase activity
FOC06_25755	COG4565	transcriptional regulatory protein
FOC06_25760	COG3493	citrate carrier protein
FOC06_25765	COG0281	malic enzyme
FOC06_25780	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC06_25790	COG5002	protein histidine kinase activity
FOC06_25795	COG0745	RESPONSE REGULATOR receiver
FOC06_25800	COG0456	acetyltransferase
FOC06_25800	COG0454	-acetyltransferase
FOC06_25805	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
FOC06_25810	COG3383	formate dehydrogenase (NAD+) activity
FOC06_25815	COG2427	Protein of unknown function (DUF1641)
FOC06_25830	COG0531	amino acid
FOC06_25835	COG0640	Transcriptional regulator
FOC06_25840	COG2217	Heavy metal translocating P-type atpase
FOC06_25845	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
FOC06_25880	COG2720	vancomycin resistance protein
FOC06_25885	COG1316	TRANSCRIPTIONal
FOC06_25890	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FOC06_25895	COG0346	lactoylglutathione lyase activity
FOC06_25900	COG1253	flavin adenine dinucleotide binding
FOC06_25905	COG1027	Aspartate ammonia-lyase
FOC06_25910	COG1620	l-lactate permease
FOC06_25925	COG3104	oligopeptide transport
FOC06_25930	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FOC06_25935	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC06_25940	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC06_25950	COG2226	methyltransferase
FOC06_25955	COG0156	8-amino-7-oxononanoate synthase activity
FOC06_25960	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FOC06_25970	COG4548	von Willebrand factor, type A
FOC06_25975	COG0714	Associated with various cellular activities
FOC06_25980	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FOC06_26000	COG0531	amino acid
FOC06_26005	COG2188	Transcriptional regulator
FOC06_26010	COG1263	PTS System
FOC06_26010	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOC06_26015	COG0366	Alpha amylase catalytic
FOC06_26030	COG0697	spore germination
FOC06_26040	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
FOC06_26045	COG1115	amino acid carrier protein
FOC06_26050	COG1126	abc transporter atp-binding protein
FOC06_26055	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC06_26060	COG0765	amino acid transport
FOC06_26065	COG0765	amino acid transport
FOC06_26070	COG0833	amino acid
FOC06_26095	COG2378	regulation of single-species biofilm formation
FOC06_26100	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
FOC06_26105	COG5002	protein histidine kinase activity
FOC06_26120	COG0659	secondary active sulfate transmembrane transporter activity
FOC06_26135	COG0747	negative chemotaxis
FOC06_26145	COG0601	transmembrane transport
FOC06_26150	COG4608	Belongs to the ABC transporter superfamily
FOC06_26160	COG2271	Major facilitator Superfamily
FOC06_26165	COG1846	Transcriptional regulator
FOC06_26175	COG1609	Transcriptional regulator
FOC06_26180	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FOC06_26195	COG1172	Belongs to the binding-protein-dependent transport system permease family
FOC06_26200	COG1879	ABC-type sugar transport system periplasmic component
FOC06_26205	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FOC06_26225	COG1063	alcohol dehydrogenase
FOC06_26240	COG3568	Endonuclease Exonuclease Phosphatase
FOC06_26265	COG1968	undecaprenyl-diphosphatase activity
FOC06_26270	COG0840	transmembrane signaling receptor activity
FOC06_26275	COG3584	3D domain protein
FOC06_26275	COG1388	LysM domain
FOC06_26280	COG1476	TRANSCRIPTIONal
FOC06_26295	COG3104	oligopeptide transport
FOC06_26300	COG1114	Component of the transport system for branched-chain amino acids
FOC06_26315	COG1113	amino acid transport
FOC06_26320	COG2252	PERMEase
FOC06_26345	COG0569	domain protein
FOC06_26345	COG0475	glutathione-regulated potassium exporter activity
FOC06_26360	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FOC06_26365	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
FOC06_26370	COG0833	amino acid
FOC06_26375	COG4990	cell redox homeostasis
FOC06_26390	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FOC06_26395	COG0697	spore germination
FOC06_26400	COG0531	amino acid
FOC06_26410	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
FOC06_26415	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
FOC06_26420	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
FOC06_26420	COG1918	ferrous iron import across plasma membrane
FOC06_26425	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
FOC06_26430	COG0573	inorganic phosphate transmembrane transporter activity
FOC06_26435	COG0581	inorganic phosphate transmembrane transporter activity
FOC06_26445	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOC06_26560	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
FOC06_26580	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
FOC06_26585	COG1116	anion transmembrane transporter activity
FOC06_26590	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC06_26595	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FOC06_26600	COG0352	thiamine-phosphate diphosphorylase activity
FOC06_26605	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC06_26610	COG2104	thiamine diphosphate biosynthetic process
FOC06_26620	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FOC06_26625	COG0351	phosphomethylpyrimidine kinase
FOC06_26665	COG2205	protein histidine kinase activity
FOC06_26670	COG2814	Major facilitator Superfamily
FOC06_26675	COG1846	Transcriptional regulator
FOC06_26690	COG2252	PERMEase
FOC06_26695	COG1028	Short-chain dehydrogenase reductase Sdr
FOC06_26710	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FOC06_26715	COG1621	beta-fructofuranosidase activity
FOC06_26720	COG1263	PTS System
FOC06_26720	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOC06_26725	COG1609	Transcriptional regulator
FOC06_26735	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC06_26740	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
FOC06_26775	COG0778	Nitroreductase
FOC06_26780	COG2719	SpoVR family
FOC06_26805	COG0446	pyridine nucleotide-disulphide oxidoreductase
FOC06_26810	COG1937	Protein conserved in bacteria
FOC06_26815	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FOC06_26815	COG0425	Belongs to the sulfur carrier protein TusA family
FOC06_26820	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC06_26820	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FOC06_26825	COG0425	Belongs to the sulfur carrier protein TusA family
FOC06_26830	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FOC06_26840	COG2210	Belongs to the sulfur carrier protein TusA family
FOC06_26845	COG0730	response to heat
FOC06_26855	COG1316	TRANSCRIPTIONal
FOC06_26860	COG0604	alcohol dehydrogenase
FOC06_26865	COG1283	sodium-dependent phosphate transmembrane transporter activity
FOC06_26880	COG3711	transcriptional antiterminator
FOC06_26880	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOC06_26885	COG1447	Phosphotransferase system cellobiose-specific component IIA
FOC06_26890	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FOC06_26910	COG3584	3D domain protein
FOC06_26910	COG1388	LysM domain
FOC06_26915	COG0577	efflux transmembrane transporter activity
FOC06_26920	COG1136	(ABC) transporter
FOC06_26930	COG5522	Integral membrane protein (intg_mem_TP0381)
FOC06_26945	COG1114	Component of the transport system for branched-chain amino acids
FOC06_26950	COG3546	catalase activity
FOC06_26985	COG0586	Pfam SNARE associated Golgi protein
FOC06_27015	COG0531	amino acid
FOC06_27020	COG0475	glutathione-regulated potassium exporter activity
FOC06_27030	COG1737	Transcriptional regulator
FOC06_27040	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOC06_27040	COG1263	PTS System
FOC06_27050	COG2259	Doxx family
FOC06_27065	COG0697	spore germination
FOC06_27070	COG1522	sequence-specific DNA binding
FOC06_27080	COG2814	Major facilitator Superfamily
FOC06_27085	COG1733	regulation of RNA biosynthetic process
FOC06_27095	COG2249	NAD(P)H dehydrogenase (quinone) activity
FOC06_27100	COG4533	DNA binding
FOC06_27105	COG2211	Major facilitator Superfamily