locus-tag	class	description
FOC13_00010	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC13_00045	COG1073	alpha beta
FOC13_00065	COG0427	acetyl-CoA hydrolase
FOC13_00070	COG3279	Response regulator of the LytR AlgR family
FOC13_00080	COG3384	dioxygenase
FOC13_00085	COG2814	Major facilitator Superfamily
FOC13_00110	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FOC13_00120	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
FOC13_00125	COG0440	acetolactate synthase activity
FOC13_00130	COG0028	Belongs to the TPP enzyme family
FOC13_00135	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FOC13_00145	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FOC13_00160	COG2084	Dehydrogenase
FOC13_00175	COG2323	membrane
FOC13_00180	COG5566	PFAM Mor transcription activator
FOC13_00190	COG0733	neurotransmitter:sodium symporter activity
FOC13_00195	COG2244	polysaccharide biosynthetic process
FOC13_00210	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FOC13_00215	COG2223	nitrite transmembrane transporter activity
FOC13_00235	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FOC13_00250	COG1966	Carbon starvation protein
FOC13_00275	COG0860	N-Acetylmuramoyl-L-alanine amidase
FOC13_00280	COG1051	belongs to the nudix hydrolase family
FOC13_00330	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
FOC13_00335	COG0784	Response regulator, receiver
FOC13_00340	COG4191	Histidine kinase
FOC13_00345	COG0281	malic enzyme
FOC13_00350	COG1027	Aspartate ammonia-lyase
FOC13_00360	COG0528	UMP kinase activity
FOC13_00365	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FOC13_00380	COG1131	(ABC) transporter
FOC13_00415	COG2733	membrane
FOC13_00445	COG0785	Cytochrome C biogenesis protein
FOC13_00465	COG3340	Belongs to the peptidase S51 family
FOC13_00490	COG0114	fumarate hydratase activity
FOC13_00495	COG1757	Na H antiporter
FOC13_00500	COG0438	transferase activity, transferring glycosyl groups
FOC13_00500	COG1216	Glycosyl transferase, family 2
FOC13_00510	COG0701	Predicted permease
FOC13_00515	COG0523	cobalamin synthesis protein
FOC13_00520	COG0697	spore germination
FOC13_00525	COG1802	Transcriptional regulator
FOC13_00555	COG0367	asparagine synthase
FOC13_00585	COG0406	alpha-ribazole phosphatase activity
FOC13_00595	COG1686	Belongs to the peptidase S11 family
FOC13_00625	COG1234	tRNA 3'-trailer cleavage
FOC13_00630	COG1177	transmembrane transport
FOC13_00635	COG0725	ABC transporter, periplasmic molybdate-binding protein
FOC13_00640	COG3842	ATPase activity
FOC13_00670	COG2329	Antibiotic biosynthesis monooxygenase
FOC13_00690	COG1309	transcriptional regulator
FOC13_00715	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
FOC13_00720	COG4786	Flagellar basal body rod
FOC13_00730	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FOC13_00735	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FOC13_00745	COG1987	bacterial-type flagellum assembly
FOC13_00750	COG1338	Plays a role in the flagellum-specific transport system
FOC13_00760	COG1776	CheC inhibitor of MCP methylation
FOC13_00760	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FOC13_00775	COG0741	lytic transglycosylase activity
FOC13_00780	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FOC13_00815	COG0463	Glycosyl transferase, family 2
FOC13_00865	COG1157	protein secretion by the type III secretion system
FOC13_00875	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FOC13_00885	COG1677	Flagellar hook-basal body complex protein FliE
FOC13_00890	COG1558	bacterial-type flagellum-dependent cell motility
FOC13_00895	COG1815	bacterial-type flagellum-dependent cell motility
FOC13_00920	COG1256	bacterial-type flagellum assembly
FOC13_00940	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
FOC13_00955	COG1776	CheC inhibitor of MCP methylation
FOC13_00955	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FOC13_00965	COG2201	protein-glutamate methylesterase activity
FOC13_00970	COG1360	Flagellar Motor Protein
FOC13_00975	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
FOC13_00985	COG1923	regulation of RNA biosynthetic process
FOC13_01040	COG1434	Gram-negative-bacterium-type cell wall biogenesis
FOC13_01045	COG2323	membrane
FOC13_01055	COG4978	Transcriptional regulator
FOC13_01055	COG0789	Transcriptional regulator
FOC13_01065	COG0475	glutathione-regulated potassium exporter activity
FOC13_01075	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FOC13_01080	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FOC13_01085	COG3162	membrane
FOC13_01100	COG1280	lysine exporter protein (LysE YggA)
FOC13_01140	COG0328	RNA-DNA hybrid ribonuclease activity
FOC13_01160	COG0454	-acetyltransferase
FOC13_01180	COG1215	transferase activity, transferring glycosyl groups
FOC13_01195	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
FOC13_01220	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FOC13_01270	COG0456	acetyltransferase
FOC13_01280	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
FOC13_01285	COG2311	Membrane
FOC13_01290	COG2233	PERMEase
FOC13_01305	COG0024	Methionine aminopeptidase
FOC13_01310	COG3173	Aminoglycoside phosphotransferase
FOC13_01320	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
FOC13_01325	COG1199	ATP-dependent helicase activity
FOC13_01335	COG0116	Belongs to the methyltransferase superfamily
FOC13_01350	COG4474	Belongs to the UPF0398 family
FOC13_01390	COG4499	WXG100 protein secretion system (Wss), protein YukC
FOC13_01390	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FOC13_01400	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
FOC13_01405	COG3935	DnaD domain protein
FOC13_01425	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FOC13_01425	COG1199	ATP-dependent helicase activity
FOC13_01460	COG0438	transferase activity, transferring glycosyl groups
FOC13_01465	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
FOC13_01480	COG1694	Mazg nucleotide pyrophosphohydrolase
FOC13_01485	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC13_01495	COG2738	Putative neutral zinc metallopeptidase
FOC13_01510	COG4347	Protein of unknown function (DUF1405)
FOC13_01520	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
FOC13_01540	COG0457	Tetratricopeptide repeat
FOC13_01545	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
FOC13_01560	COG0105	UTP biosynthetic process
FOC13_01565	COG0142	geranyltranstransferase activity
FOC13_01575	COG0142	geranyltranstransferase activity
FOC13_01590	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
FOC13_01665	COG0492	ferredoxin-NADP+ reductase activity
FOC13_01685	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
FOC13_01690	COG4862	establishment of competence for transformation
FOC13_01710	COG1266	CAAX protease self-immunity
FOC13_01715	COG0514	ATP-dependent DNA helicase (RecQ)
FOC13_01720	COG4955	Helix-turn-helix domain
FOC13_01725	COG1141	Ferredoxin
FOC13_01730	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
FOC13_01745	COG2096	Adenosyltransferase
FOC13_01750	COG5002	protein histidine kinase activity
FOC13_01755	COG0745	RESPONSE REGULATOR receiver
FOC13_01760	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FOC13_01765	COG1333	cytochrome c biogenesis protein
FOC13_01775	COG1187	pseudouridine synthase activity
FOC13_01780	COG0700	Nucleoside recognition
FOC13_01785	COG2715	membrane protein required for spore maturation
FOC13_01790	COG1686	Belongs to the peptidase S11 family
FOC13_01795	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FOC13_01810	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
FOC13_01810	COG0392	lysyltransferase activity
FOC13_01830	COG5002	protein histidine kinase activity
FOC13_01835	COG0582	viral genome integration into host DNA
FOC13_01845	COG1801	Protein of unknown function DUF72
FOC13_01865	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FOC13_01870	COG1392	Phosphate transport regulator
FOC13_01875	COG0306	phosphate transporter
FOC13_01880	COG0730	response to heat
FOC13_01895	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FOC13_01895	COG1017	nitric oxide dioxygenase activity
FOC13_01920	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FOC13_01930	COG1114	Component of the transport system for branched-chain amino acids
FOC13_01940	COG2197	response regulator
FOC13_01945	COG4585	Histidine kinase
FOC13_01950	COG4758	membrane
FOC13_01965	COG1757	Na H antiporter
FOC13_01985	COG0733	neurotransmitter:sodium symporter activity
FOC13_01990	COG1648	precorrin-2 dehydrogenase activity
FOC13_02010	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FOC13_02015	COG0529	Catalyzes the synthesis of activated sulfate
FOC13_02035	COG0019	diaminopimelate decarboxylase activity
FOC13_02045	COG1368	sulfuric ester hydrolase activity
FOC13_02050	COG1183	phosphatidylcholine synthase activity
FOC13_02065	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
FOC13_02100	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
FOC13_02125	COG0473	3-isopropylmalate dehydrogenase activity
FOC13_02135	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
FOC13_02140	COG0440	acetolactate synthase activity
FOC13_02145	COG0028	Belongs to the TPP enzyme family
FOC13_02150	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FOC13_02175	COG3874	Sporulation protein YtfJ
FOC13_02180	COG4709	membrane
FOC13_02185	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FOC13_02190	COG1301	dicarboxylic acid transport
FOC13_02200	COG1846	Transcriptional regulator
FOC13_02215	COG1968	undecaprenyl-diphosphatase activity
FOC13_02220	COG0534	Mate efflux family protein
FOC13_02235	COG3173	Aminoglycoside phosphotransferase
FOC13_02245	COG0716	FMN binding
FOC13_02265	COG1696	Membrane protein involved in D-alanine export
FOC13_02275	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
FOC13_02280	COG2070	2-Nitropropane dioxygenase
FOC13_02285	COG1619	proteins homologs of microcin C7 resistance protein MccF
FOC13_02295	COG1335	isochorismatase
FOC13_02305	COG1522	sequence-specific DNA binding
FOC13_02320	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
FOC13_02325	COG1131	(ABC) transporter
FOC13_02335	COG1131	(ABC) transporter
FOC13_02340	COG1725	Transcriptional regulator
FOC13_02345	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FOC13_02365	COG1780	Probably involved in ribonucleotide reductase function
FOC13_02390	COG4873	Protein conserved in bacteria
FOC13_02405	COG0720	synthase
FOC13_02415	COG5002	protein histidine kinase activity
FOC13_02420	COG2318	DinB family
FOC13_02430	COG1846	Transcriptional regulator
FOC13_02435	COG3852	Histidine kinase
FOC13_02445	COG2861	carbohydrate metabolic process
FOC13_02465	COG1349	DNA-binding transcription factor activity
FOC13_02480	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FOC13_02495	COG1840	ABC-type Fe3 transport system, periplasmic component
FOC13_02505	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FOC13_02515	COG3243	poly(R)-hydroxyalkanoic acid synthase
FOC13_02520	COG1028	Short-chain dehydrogenase reductase Sdr
FOC13_02540	COG2030	dehydratase
FOC13_02550	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FOC13_02555	COG0861	Integral membrane protein TerC family
FOC13_02560	COG2116	formate transmembrane transporter activity
FOC13_02570	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
FOC13_02590	COG2186	Transcriptional regulator
FOC13_02595	COG5002	protein histidine kinase activity
FOC13_02600	COG0745	RESPONSE REGULATOR receiver
FOC13_02610	COG3835	regulator
FOC13_02615	COG0277	FAD linked oxidase domain protein
FOC13_02620	COG0247	lactate metabolic process
FOC13_02625	COG2340	Cysteine-rich secretory protein family
FOC13_02635	COG0564	pseudouridine synthase activity
FOC13_02645	COG2409	Drug exporters of the RND superfamily
FOC13_02655	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
FOC13_02660	COG1177	transmembrane transport
FOC13_02665	COG1176	ABC-type spermidine putrescine transport system, permease component I
FOC13_02670	COG3842	ATPase activity
FOC13_02675	COG1012	belongs to the aldehyde dehydrogenase family
FOC13_02710	COG0681	Belongs to the peptidase S26 family
FOC13_02715	COG1686	Belongs to the peptidase S11 family
FOC13_02725	COG2226	methyltransferase
FOC13_02785	COG1476	TRANSCRIPTIONal
FOC13_02795	COG0508	dehydrogenase complex catalyzes the overall conversion of
FOC13_02850	COG5634	Uncharacterized conserved protein (DUF2278)
FOC13_02855	COG1620	l-lactate permease
FOC13_02890	COG0512	Glutamine amidotransferase of anthranilate synthase
FOC13_02890	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
FOC13_02900	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FOC13_02905	COG5492	domain, Protein
FOC13_02920	COG2382	esterase
FOC13_02925	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
FOC13_02930	COG2153	protein acetylation
FOC13_02975	COG1091	dTDP-4-dehydrorhamnose reductase activity
FOC13_02990	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
FOC13_03010	COG0457	Tetratricopeptide repeat
FOC13_03010	COG0463	Glycosyl transferase, family 2
FOC13_03030	COG1216	Glycosyl transferase, family 2
FOC13_03050	COG0564	pseudouridine synthase activity
FOC13_03055	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
FOC13_03060	COG2357	RelA SpoT domain protein
FOC13_03070	COG4116	CYTH
FOC13_03075	COG2346	COG2346, Truncated hemoglobins
FOC13_03085	COG1164	Oligoendopeptidase f
FOC13_03095	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FOC13_03100	COG4862	establishment of competence for transformation
FOC13_03105	COG0861	Integral membrane protein TerC family
FOC13_03110	COG1393	Belongs to the ArsC family
FOC13_03120	COG4166	transmembrane transport
FOC13_03125	COG0534	Mate efflux family protein
FOC13_03130	COG4608	Belongs to the ABC transporter superfamily
FOC13_03135	COG0444	Belongs to the ABC transporter superfamily
FOC13_03140	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC13_03145	COG0601	transmembrane transport
FOC13_03150	COG4166	transmembrane transport
FOC13_03160	COG0180	Tryptophanyl-tRNA synthetase
FOC13_03170	COG5504	Zn-dependent protease
FOC13_03175	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FOC13_03180	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FOC13_03195	COG2267	carboxylic ester hydrolase activity
FOC13_03205	COG0542	response to heat
FOC13_03215	COG0561	phosphatase activity
FOC13_03230	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC13_03240	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FOC13_03250	COG2996	Protein conserved in bacteria
FOC13_03275	COG0753	catalase activity
FOC13_03285	COG0367	asparagine synthase
FOC13_03310	COG0179	Fumarylacetoacetate (FAA) hydrolase
FOC13_03355	COG1074	ATP-dependent DNA helicase activity
FOC13_03360	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
FOC13_03370	COG0398	Pfam SNARE associated Golgi protein
FOC13_03375	COG4903	ComK protein
FOC13_03390	COG1278	Cold shock
FOC13_03400	COG2224	Isocitrate lyase
FOC13_03405	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
FOC13_03410	COG0497	DNA recombination
FOC13_03425	COG0697	spore germination
FOC13_03430	COG0840	transmembrane signaling receptor activity
FOC13_03435	COG0501	Belongs to the peptidase M48B family
FOC13_03460	COG0745	RESPONSE REGULATOR receiver
FOC13_03465	COG2205	protein histidine kinase activity
FOC13_03475	COG2207	Transcriptional regulator
FOC13_03475	COG3708	Transcriptional regulator
FOC13_03480	COG1595	DNA-templated transcription, initiation
FOC13_03490	COG1078	dGTPase activity
FOC13_03525	COG3209	COG3209 Rhs family protein
FOC13_03555	COG0318	PFAM AMP-dependent synthetase and ligase
FOC13_03565	COG0095	Lipoate-protein ligase
FOC13_03570	COG1234	tRNA 3'-trailer cleavage
FOC13_03580	COG1609	Transcriptional regulator
FOC13_03605	COG1511	domain protein
FOC13_03610	COG1309	transcriptional regulator
FOC13_03655	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
FOC13_03660	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FOC13_03665	COG2329	Antibiotic biosynthesis monooxygenase
FOC13_03670	COG3428	Bacterial PH domain
FOC13_03675	COG3402	PFAM membrane-flanked domain
FOC13_03720	COG3402	PFAM membrane-flanked domain
FOC13_03725	COG1309	transcriptional regulator
FOC13_03740	COG4473	ABC transporter
FOC13_03745	COG1131	(ABC) transporter
FOC13_03750	COG0537	adenosine 5'-monophosphoramidase activity
FOC13_03755	COG4980	gas vesicle protein
FOC13_03775	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FOC13_03780	COG3973	AAA domain
FOC13_03790	COG0477	Major facilitator Superfamily
FOC13_03795	COG0477	Major facilitator Superfamily
FOC13_03830	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
FOC13_03840	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
FOC13_03845	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
FOC13_03865	COG2267	carboxylic ester hydrolase activity
FOC13_03870	COG0457	Tetratricopeptide repeat
FOC13_03875	COG0346	lactoylglutathione lyase activity
FOC13_03880	COG0346	lactoylglutathione lyase activity
FOC13_03885	COG2814	Major facilitator Superfamily
FOC13_03890	COG1309	transcriptional regulator
FOC13_03915	COG0420	3'-5' exonuclease activity
FOC13_03945	COG0393	Putative heavy-metal-binding
FOC13_03965	COG0784	Response regulator, receiver
FOC13_03965	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC13_03965	COG2198	Histidine kinase
FOC13_03965	COG2205	protein histidine kinase activity
FOC13_03970	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
FOC13_03975	COG2208	phosphoserine phosphatase activity
FOC13_03985	COG1191	sigma factor activity
FOC13_04010	COG3237	CsbD-like
FOC13_04060	COG3437	response regulator, receiver
FOC13_04060	COG2770	Histidine kinase
FOC13_04090	COG1959	2 iron, 2 sulfur cluster binding
FOC13_04095	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
FOC13_04100	COG2376	Dihydroxyacetone kinase
FOC13_04110	COG2376	Dihydroxyacetone kinase
FOC13_04130	COG1183	phosphatidylcholine synthase activity
FOC13_04155	COG3320	Male sterility
FOC13_04155	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FOC13_04200	COG0477	Major facilitator Superfamily
FOC13_04230	COG0305	Participates in initiation and elongation during chromosome replication
FOC13_04245	COG0789	Transcriptional regulator
FOC13_04245	COG4978	Transcriptional regulator
FOC13_04275	COG3181	Tripartite tricarboxylate transporter family receptor
FOC13_04280	COG4565	transcriptional regulatory protein
FOC13_04285	COG3290	protein histidine kinase activity
FOC13_04290	COG0477	Major facilitator Superfamily
FOC13_04320	COG0322	excinuclease ABC activity
FOC13_04325	COG4608	Belongs to the ABC transporter superfamily
FOC13_04335	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC13_04340	COG0601	transmembrane transport
FOC13_04375	COG3938	Belongs to the proline racemase family
FOC13_04395	COG1363	Peptidase, m42
FOC13_04415	COG1024	Enoyl-CoA hydratase
FOC13_04430	COG1696	Membrane protein involved in D-alanine export
FOC13_04445	COG4196	transglutaminase domain protein
FOC13_04450	COG0860	N-Acetylmuramoyl-L-alanine amidase
FOC13_04460	COG2244	polysaccharide biosynthetic process
FOC13_04465	COG0653	protein targeting
FOC13_04485	COG0659	secondary active sulfate transmembrane transporter activity
FOC13_04500	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FOC13_04515	COG0561	phosphatase activity
FOC13_04530	COG3527	Alpha-acetolactate decarboxylase
FOC13_04535	COG0028	Belongs to the TPP enzyme family
FOC13_04565	COG0189	ligase activity
FOC13_04580	COG1126	abc transporter atp-binding protein
FOC13_04585	COG0765	amino acid transport
FOC13_04590	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC13_04600	COG1132	(ABC) transporter
FOC13_04605	COG1012	belongs to the aldehyde dehydrogenase family
FOC13_04615	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
FOC13_04620	COG0531	amino acid
FOC13_04630	COG0753	catalase activity
FOC13_04630	COG0693	protein deglycase activity
FOC13_04635	COG0693	protein deglycase activity
FOC13_04645	COG2211	Major facilitator Superfamily
FOC13_04650	COG4533	DNA binding
FOC13_04655	COG2249	NAD(P)H dehydrogenase (quinone) activity
FOC13_04665	COG1733	regulation of RNA biosynthetic process
FOC13_04670	COG2814	Major facilitator Superfamily
FOC13_04675	COG1309	transcriptional regulator
FOC13_04680	COG2076	Multidrug Resistance protein
FOC13_04685	COG2076	Multidrug Resistance protein
FOC13_04695	COG1522	sequence-specific DNA binding
FOC13_04700	COG0697	spore germination
FOC13_04715	COG2259	Doxx family
FOC13_04725	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOC13_04725	COG1263	PTS System
FOC13_04735	COG1737	Transcriptional regulator
FOC13_04745	COG0475	glutathione-regulated potassium exporter activity
FOC13_04750	COG0531	amino acid
FOC13_04780	COG0586	Pfam SNARE associated Golgi protein
FOC13_04815	COG3546	catalase activity
FOC13_04820	COG1114	Component of the transport system for branched-chain amino acids
FOC13_04835	COG5522	Integral membrane protein (intg_mem_TP0381)
FOC13_04845	COG1136	(ABC) transporter
FOC13_04850	COG0577	efflux transmembrane transporter activity
FOC13_04855	COG3584	3D domain protein
FOC13_04855	COG1388	LysM domain
FOC13_04875	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FOC13_04880	COG1447	Phosphotransferase system cellobiose-specific component IIA
FOC13_04885	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOC13_04885	COG3711	transcriptional antiterminator
FOC13_04900	COG1283	sodium-dependent phosphate transmembrane transporter activity
FOC13_04905	COG0604	alcohol dehydrogenase
FOC13_04910	COG1316	TRANSCRIPTIONal
FOC13_04920	COG0730	response to heat
FOC13_04925	COG2210	Belongs to the sulfur carrier protein TusA family
FOC13_04935	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FOC13_04940	COG0425	Belongs to the sulfur carrier protein TusA family
FOC13_04945	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC13_04945	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FOC13_04950	COG0425	Belongs to the sulfur carrier protein TusA family
FOC13_04950	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FOC13_04955	COG1937	Protein conserved in bacteria
FOC13_04960	COG0446	pyridine nucleotide-disulphide oxidoreductase
FOC13_04985	COG2719	SpoVR family
FOC13_04990	COG0778	Nitroreductase
FOC13_05025	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
FOC13_05030	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC13_05040	COG1609	Transcriptional regulator
FOC13_05045	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOC13_05045	COG1263	PTS System
FOC13_05050	COG1621	beta-fructofuranosidase activity
FOC13_05055	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FOC13_05070	COG1028	Short-chain dehydrogenase reductase Sdr
FOC13_05075	COG2252	PERMEase
FOC13_05090	COG1846	Transcriptional regulator
FOC13_05095	COG2814	Major facilitator Superfamily
FOC13_05100	COG2205	protein histidine kinase activity
FOC13_05140	COG0351	phosphomethylpyrimidine kinase
FOC13_05145	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FOC13_05155	COG2104	thiamine diphosphate biosynthetic process
FOC13_05160	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC13_05165	COG0352	thiamine-phosphate diphosphorylase activity
FOC13_05170	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FOC13_05175	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC13_05180	COG1116	anion transmembrane transporter activity
FOC13_05185	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
FOC13_05205	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
FOC13_05320	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOC13_05330	COG0581	inorganic phosphate transmembrane transporter activity
FOC13_05335	COG0573	inorganic phosphate transmembrane transporter activity
FOC13_05340	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
FOC13_05345	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
FOC13_05345	COG1918	ferrous iron import across plasma membrane
FOC13_05350	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
FOC13_05355	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
FOC13_05365	COG0531	amino acid
FOC13_05370	COG0697	spore germination
FOC13_05375	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FOC13_05390	COG4990	cell redox homeostasis
FOC13_05395	COG0833	amino acid
FOC13_05400	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
FOC13_05405	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FOC13_05420	COG0569	domain protein
FOC13_05420	COG0475	glutathione-regulated potassium exporter activity
FOC13_05445	COG2252	PERMEase
FOC13_05450	COG1113	amino acid transport
FOC13_05465	COG1114	Component of the transport system for branched-chain amino acids
FOC13_05470	COG3104	oligopeptide transport
FOC13_05485	COG1476	TRANSCRIPTIONal
FOC13_05490	COG3584	3D domain protein
FOC13_05490	COG1388	LysM domain
FOC13_05495	COG0840	transmembrane signaling receptor activity
FOC13_05500	COG1968	undecaprenyl-diphosphatase activity
FOC13_05525	COG3568	Endonuclease Exonuclease Phosphatase
FOC13_05540	COG1063	alcohol dehydrogenase
FOC13_05560	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FOC13_05565	COG1879	ABC-type sugar transport system periplasmic component
FOC13_05570	COG1172	Belongs to the binding-protein-dependent transport system permease family
FOC13_05585	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FOC13_05590	COG1609	Transcriptional regulator
FOC13_05600	COG1846	Transcriptional regulator
FOC13_05605	COG2271	Major facilitator Superfamily
FOC13_05615	COG4608	Belongs to the ABC transporter superfamily
FOC13_05620	COG0601	transmembrane transport
FOC13_05630	COG0747	negative chemotaxis
FOC13_05645	COG0659	secondary active sulfate transmembrane transporter activity
FOC13_05660	COG5002	protein histidine kinase activity
FOC13_05665	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
FOC13_05670	COG2378	regulation of single-species biofilm formation
FOC13_05695	COG0833	amino acid
FOC13_05700	COG0765	amino acid transport
FOC13_05705	COG0765	amino acid transport
FOC13_05710	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC13_05715	COG1126	abc transporter atp-binding protein
FOC13_05720	COG1115	amino acid carrier protein
FOC13_05725	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
FOC13_05735	COG0697	spore germination
FOC13_05750	COG0366	Alpha amylase catalytic
FOC13_05755	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOC13_05755	COG1263	PTS System
FOC13_05760	COG2188	Transcriptional regulator
FOC13_05765	COG0531	amino acid
FOC13_05785	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FOC13_05790	COG0714	Associated with various cellular activities
FOC13_05795	COG4548	von Willebrand factor, type A
FOC13_05805	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FOC13_05810	COG0156	8-amino-7-oxononanoate synthase activity
FOC13_05815	COG2226	methyltransferase
FOC13_05825	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC13_05830	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC13_05835	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FOC13_05840	COG3104	oligopeptide transport
FOC13_05855	COG1620	l-lactate permease
FOC13_05860	COG1027	Aspartate ammonia-lyase
FOC13_05865	COG1253	flavin adenine dinucleotide binding
FOC13_05870	COG0346	lactoylglutathione lyase activity
FOC13_05875	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FOC13_05880	COG1316	TRANSCRIPTIONal
FOC13_05885	COG2720	vancomycin resistance protein
FOC13_05905	COG3227	Zinc metalloprotease (Elastase)
FOC13_05920	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
FOC13_05925	COG2217	Heavy metal translocating P-type atpase
FOC13_05930	COG0640	Transcriptional regulator
FOC13_05935	COG0531	amino acid
FOC13_05950	COG2427	Protein of unknown function (DUF1641)
FOC13_05955	COG3383	formate dehydrogenase (NAD+) activity
FOC13_05960	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
FOC13_05965	COG0454	-acetyltransferase
FOC13_05965	COG0456	acetyltransferase
FOC13_05970	COG0745	RESPONSE REGULATOR receiver
FOC13_05975	COG5002	protein histidine kinase activity
FOC13_05985	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC13_06000	COG0281	malic enzyme
FOC13_06005	COG3493	citrate carrier protein
FOC13_06010	COG4565	transcriptional regulatory protein
FOC13_06015	COG3290	protein histidine kinase activity
FOC13_06025	COG4990	cell redox homeostasis
FOC13_06035	COG5002	protein histidine kinase activity
FOC13_06040	COG0745	RESPONSE REGULATOR receiver
FOC13_06045	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
FOC13_06055	COG0395	ABC-type sugar transport system, permease component
FOC13_06060	COG1175	transmembrane transport
FOC13_06065	COG3842	ATPase activity
FOC13_06070	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
FOC13_06090	COG2851	Citrate transporter
FOC13_06100	COG3290	protein histidine kinase activity
FOC13_06110	COG2268	Band 7 protein
FOC13_06115	COG1585	Membrane protein implicated in regulation of membrane protease activity
FOC13_06125	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FOC13_06145	COG2766	serine protein kinase
FOC13_06155	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
FOC13_06165	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
FOC13_06175	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FOC13_06180	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
FOC13_06295	COG0735	belongs to the Fur family
FOC13_06300	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
FOC13_06320	COG4555	ABC transporter
FOC13_06330	COG0070	glutamate synthase
FOC13_06330	COG0069	glutamate synthase activity
FOC13_06330	COG0067	glutamate synthase
FOC13_06335	COG4129	membrane
FOC13_06340	COG1132	(ABC) transporter
FOC13_06365	COG1194	a g-specific adenine glycosylase
FOC13_06370	COG1988	membrane-bound metal-dependent
FOC13_06400	COG1090	epimerase
FOC13_06405	COG1228	amidohydrolase
FOC13_06425	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FOC13_06445	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
FOC13_06445	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FOC13_06460	COG0463	Glycosyl transferase, family 2
FOC13_06475	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FOC13_06480	COG1263	PTS System
FOC13_06480	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOC13_06485	COG2066	Belongs to the glutaminase family
FOC13_06505	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FOC13_06510	COG0833	amino acid
FOC13_06520	COG3829	transcription factor binding
FOC13_06530	COG0101	tRNA pseudouridine synthase activity
FOC13_06735	COG1484	DNA-dependent DNA replication
FOC13_06770	COG1396	sequence-specific DNA binding
FOC13_06785	COG1396	sequence-specific DNA binding
FOC13_06790	COG0582	viral genome integration into host DNA
FOC13_06795	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FOC13_06800	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
FOC13_06825	COG0535	radical SAM domain protein
FOC13_06835	COG0387	Pfam Sodium calcium exchanger
FOC13_06840	COG3871	stress protein (general stress protein 26)
FOC13_06855	COG0586	Pfam SNARE associated Golgi protein
FOC13_06875	COG0697	spore germination
FOC13_06880	COG2217	Heavy metal translocating P-type atpase
FOC13_06885	COG1295	ribonuclease BN
FOC13_06895	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FOC13_06910	COG3853	Toxic anion resistance protein (TelA)
FOC13_06920	COG0861	Integral membrane protein TerC family
FOC13_06925	COG2310	stress, protein
FOC13_06930	COG2310	stress, protein
FOC13_06935	COG2310	stress, protein
FOC13_06950	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
FOC13_06965	COG2270	Major facilitator Superfamily
FOC13_07010	COG0488	(ABC) transporter
FOC13_07015	COG1116	anion transmembrane transporter activity
FOC13_07025	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC13_07040	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
FOC13_07070	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOC13_07070	COG2190	(PTS) system
FOC13_07070	COG1263	PTS System
FOC13_07075	COG0366	Alpha amylase catalytic
FOC13_07080	COG0840	transmembrane signaling receptor activity
FOC13_07085	COG0840	transmembrane signaling receptor activity
FOC13_07095	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC13_07100	COG0765	amino acid transport
FOC13_07110	COG0723	plastoquinol--plastocyanin reductase activity
FOC13_07110	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC13_07115	COG2814	Major facilitator Superfamily
FOC13_07120	COG3541	Predicted nucleotidyltransferase
FOC13_07140	COG5002	protein histidine kinase activity
FOC13_07175	COG0166	Belongs to the GPI family
FOC13_07190	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FOC13_07195	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC13_07200	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC13_07205	COG0235	Class ii aldolase
FOC13_07215	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
FOC13_07220	COG0450	alkyl hydroperoxide reductase
FOC13_07235	COG1473	amidohydrolase
FOC13_07265	COG4807	Protein conserved in bacteria
FOC13_07275	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FOC13_07280	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FOC13_07285	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FOC13_07300	COG2309	aminopeptidase activity
FOC13_07305	COG2076	Multidrug Resistance protein
FOC13_07310	COG1012	belongs to the aldehyde dehydrogenase family
FOC13_07320	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FOC13_07325	COG0546	phosphoglycolate phosphatase activity
FOC13_07330	COG1597	lipid kinase activity
FOC13_07355	COG1846	Transcriptional regulator
FOC13_07375	COG1464	Belongs to the NlpA lipoprotein family
FOC13_07380	COG2011	ABC-type metal ion transport system permease component
FOC13_07385	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FOC13_07390	COG1335	isochorismatase
FOC13_07405	COG4851	CamS sex pheromone cAM373 precursor
FOC13_07415	COG0210	DNA helicase
FOC13_07440	COG0151	Belongs to the GarS family
FOC13_07450	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
FOC13_07460	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
FOC13_07475	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
FOC13_07485	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
FOC13_07490	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
FOC13_07495	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
FOC13_07515	COG0745	RESPONSE REGULATOR receiver
FOC13_07520	COG2205	protein histidine kinase activity
FOC13_07535	COG1968	undecaprenyl-diphosphatase activity
FOC13_07575	COG2226	methyltransferase
FOC13_07610	COG5002	protein histidine kinase activity
FOC13_07620	COG2252	PERMEase
FOC13_07640	COG1266	CAAX protease self-immunity
FOC13_07655	COG0488	(ABC) transporter
FOC13_07660	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
FOC13_07665	COG0456	acetyltransferase
FOC13_07670	COG1214	PFAM Peptidase M22, glycoprotease
FOC13_07675	COG0802	atpase or kinase
FOC13_07770	COG2183	response to ionizing radiation
FOC13_07775	COG2337	Toxic component of a toxin-antitoxin (TA) module
FOC13_07780	COG0864	Transcriptional regulator
FOC13_07785	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FOC13_07790	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
FOC13_07800	COG0457	Tetratricopeptide repeat
FOC13_07800	COG0705	Rhomboid family
FOC13_07805	COG4294	response to UV
FOC13_07815	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
FOC13_07825	COG2814	Major facilitator Superfamily
FOC13_07835	COG0179	Fumarylacetoacetate (FAA) hydrolase
FOC13_07840	COG3185	4-Hydroxyphenylpyruvate dioxygenase
FOC13_07860	COG4608	Belongs to the ABC transporter superfamily
FOC13_07865	COG0444	Belongs to the ABC transporter superfamily
FOC13_07875	COG0601	transmembrane transport
FOC13_07880	COG0747	negative chemotaxis
FOC13_07895	COG0488	(ABC) transporter
FOC13_07915	COG5298	Protein conserved in bacteria
FOC13_07920	COG0084	hydrolase, TatD family'
FOC13_07930	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC13_07940	COG1609	Transcriptional regulator
FOC13_07950	COG0204	Acyl-transferase
FOC13_07965	COG0697	spore germination
FOC13_07970	COG0583	DNA-binding transcription factor activity
FOC13_07980	COG1910	domain protein
FOC13_07990	COG4149	molybdate abc transporter
FOC13_07995	COG4975	Glucose uptake
FOC13_08005	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
FOC13_08010	COG0656	L-ascorbic acid biosynthetic process
FOC13_08015	COG4166	transmembrane transport
FOC13_08020	COG4166	transmembrane transport
FOC13_08035	COG2207	Transcriptional regulator
FOC13_08045	COG4166	transmembrane transport
FOC13_08050	COG4608	Belongs to the ABC transporter superfamily
FOC13_08055	COG0444	Belongs to the ABC transporter superfamily
FOC13_08060	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC13_08065	COG0601	transmembrane transport
FOC13_08080	COG2814	Major facilitator Superfamily
FOC13_08090	COG2271	Major facilitator Superfamily
FOC13_08095	COG0277	FAD linked oxidase domain protein
FOC13_08110	COG1464	Belongs to the NlpA lipoprotein family
FOC13_08115	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FOC13_08120	COG2011	ABC-type metal ion transport system permease component
FOC13_08155	COG4946	Tricorn protease homolog
FOC13_08155	COG0823	Involved in the tonB-independent uptake of proteins
FOC13_08155	COG1506	peptidase
FOC13_08160	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
FOC13_08180	COG0596	Alpha beta hydrolase
FOC13_08185	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
FOC13_08200	COG4856	YbbR-like protein
FOC13_08205	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
FOC13_08285	COG0726	polysaccharide deacetylase
FOC13_08290	COG2194	sulfuric ester hydrolase activity
FOC13_08300	COG0489	protein tyrosine kinase activity
FOC13_08305	COG0860	N-Acetylmuramoyl-L-alanine amidase
FOC13_08325	COG0101	tRNA pseudouridine synthase activity
FOC13_08330	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
FOC13_08335	COG1122	ATPase activity
FOC13_08365	COG0257	Belongs to the bacterial ribosomal protein bL36 family
FOC13_08375	COG0024	Methionine aminopeptidase
FOC13_08385	COG0201	protein transport
FOC13_08410	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
FOC13_08515	COG1358	cellular component organization or biogenesis
FOC13_08520	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
FOC13_08530	COG2813	Specifically methylates the guanine in position
FOC13_08555	COG0250	Participates in transcription elongation, termination and antitermination
FOC13_08560	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FOC13_08565	COG0267	Belongs to the bacterial ribosomal protein bL33 family
FOC13_08575	COG3688	RNA-binding protein containing a PIN domain
FOC13_08580	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FOC13_08595	COG1045	serine acetyltransferase
FOC13_08615	COG4956	integral membrane protein (PIN domain superfamily)
FOC13_08625	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
FOC13_08630	COG0542	response to heat
FOC13_08640	COG3880	PFAM UvrB UvrC protein
FOC13_08670	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FOC13_08675	COG1396	sequence-specific DNA binding
FOC13_08680	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
FOC13_08685	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
FOC13_08690	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
FOC13_08695	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FOC13_08700	COG0512	Glutamine amidotransferase of anthranilate synthase
FOC13_08705	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
FOC13_08710	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FOC13_08725	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FOC13_08735	COG0037	tRNA processing
FOC13_08740	COG2208	phosphoserine phosphatase activity
FOC13_08755	COG1098	S1 RNA binding domain
FOC13_08775	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
FOC13_08780	COG3956	TIGRFAM MazG family protein
FOC13_08785	COG2244	polysaccharide biosynthetic process
FOC13_08790	COG2002	toxin-antitoxin pair type II binding
FOC13_08795	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
FOC13_08805	COG0193	aminoacyl-tRNA hydrolase activity
FOC13_08810	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
FOC13_08825	COG0251	oxidation-reduction process
FOC13_08830	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
FOC13_08845	COG4466	Protein conserved in bacteria
FOC13_08860	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
FOC13_08865	COG0084	hydrolase, TatD family'
FOC13_08870	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOC13_08870	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOC13_08875	COG2002	toxin-antitoxin pair type II binding
FOC13_08880	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
FOC13_08890	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
FOC13_08900	COG1774	PSP1 C-terminal conserved region
FOC13_08905	COG0470	DNA polymerase III
FOC13_08915	COG1982	Orn Lys Arg decarboxylase major
FOC13_08970	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
FOC13_08980	COG0590	tRNA wobble adenosine to inosine editing
FOC13_08985	COG1335	isochorismatase
FOC13_08990	COG1428	Deoxynucleoside kinase
FOC13_08995	COG1428	Deoxynucleoside kinase
FOC13_09025	COG1686	Belongs to the peptidase S11 family
FOC13_09030	COG0517	IMP dehydrogenase activity
FOC13_09030	COG0516	GMP reductase activity
FOC13_09065	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
FOC13_09070	COG0187	DNA topoisomerase II activity
FOC13_09080	COG2501	S4 domain
FOC13_09085	COG0592	DNA-directed DNA polymerase activity
FOC13_09105	COG0706	membrane insertase activity
FOC13_09110	COG1847	R3H domain protein
FOC13_09115	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
FOC13_09135	COG1192	Involved in chromosome partitioning
FOC13_09140	COG1475	DNA binding
FOC13_09150	COG0668	transmembrane transport
FOC13_09155	COG4481	Protein conserved in bacteria
FOC13_09160	COG0012	GTP binding
FOC13_09170	COG0629	single-stranded DNA binding
FOC13_09180	COG4241	membrane
FOC13_09185	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
FOC13_09195	COG0305	Participates in initiation and elongation during chromosome replication
FOC13_09225	COG0745	RESPONSE REGULATOR receiver
FOC13_09230	COG5002	protein histidine kinase activity
FOC13_09235	COG4863	YycH protein
FOC13_09240	COG4853	Protein conserved in bacteria
FOC13_09245	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
FOC13_09250	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FOC13_09270	COG1164	Oligoendopeptidase f
FOC13_09275	COG0516	GMP reductase activity
FOC13_09295	COG1272	protein, Hemolysin III
FOC13_09300	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FOC13_09320	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FOC13_09325	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
FOC13_09330	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FOC13_09335	COG2814	Major facilitator Superfamily
FOC13_09340	COG3275	phosphorelay sensor kinase activity
FOC13_09345	COG3279	Response regulator of the LytR AlgR family
FOC13_09360	COG0628	permease
FOC13_09365	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FOC13_09365	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FOC13_09370	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOC13_09375	COG1309	transcriptional regulator
FOC13_09380	COG0463	Glycosyl transferase, family 2
FOC13_09400	COG0488	(ABC) transporter
FOC13_09415	COG1607	acyl-coa hydrolase
FOC13_09425	COG0840	transmembrane signaling receptor activity
FOC13_09450	COG0477	Major facilitator Superfamily
FOC13_09455	COG3279	Response regulator of the LytR AlgR family
FOC13_09460	COG1966	Carbon starvation protein
FOC13_09465	COG2879	small protein
FOC13_09470	COG3706	GGDEF domain
FOC13_09475	COG0351	phosphomethylpyrimidine kinase
FOC13_09485	COG2197	response regulator
FOC13_09495	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FOC13_09500	COG1011	Hydrolase
FOC13_09520	COG0460	homoserine dehydrogenase
FOC13_09530	COG1609	Transcriptional regulator
FOC13_09535	COG2755	lipolytic protein G-D-S-L family
FOC13_09540	COG1131	(ABC) transporter
FOC13_09545	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
FOC13_09555	COG2814	Major facilitator Superfamily
FOC13_09560	COG0561	phosphatase activity
FOC13_09565	COG2233	PERMEase
FOC13_09580	COG2363	Small membrane protein
FOC13_09590	COG3773	Cell wall hydrolase
FOC13_09605	COG0280	phosphate acetyltransferase
FOC13_09610	COG0095	Lipoate-protein ligase
FOC13_09635	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC13_09640	COG1120	ATPase activity
FOC13_09645	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FOC13_09650	COG1078	dGTPase activity
FOC13_09660	COG1994	Peptidase M50
FOC13_09670	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FOC13_09675	COG0584	glycerophosphoryl diester phosphodiesterase
FOC13_09680	COG0789	Transcriptional regulator
FOC13_09685	COG2814	Major facilitator Superfamily
FOC13_09690	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
FOC13_09695	COG0010	Belongs to the arginase family
FOC13_09710	COG1619	proteins homologs of microcin C7 resistance protein MccF
FOC13_09715	COG4506	Protein conserved in bacteria
FOC13_09720	COG0018	arginyl-trna synthetase
FOC13_09725	COG1595	DNA-templated transcription, initiation
FOC13_09745	COG2234	aminopeptidase activity
FOC13_09755	COG0024	Methionine aminopeptidase
FOC13_09760	COG1131	(ABC) transporter
FOC13_09765	COG0842	Transport permease protein
FOC13_09770	COG4585	Histidine kinase
FOC13_09775	COG2197	response regulator
FOC13_09800	COG5001	Diguanylate cyclase
FOC13_09800	COG3300	MHYT domain
FOC13_09810	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FOC13_09815	COG2181	nitrate reductase activity
FOC13_09815	COG0247	lactate metabolic process
FOC13_09820	COG0183	Belongs to the thiolase family
FOC13_09825	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC13_09830	COG1960	acyl-CoA dehydrogenase activity
FOC13_09835	COG1960	acyl-CoA dehydrogenase activity
FOC13_09845	COG3343	RNA polymerase activity
FOC13_09855	COG4821	SIS domain
FOC13_09870	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
FOC13_09875	COG1494	fructose-1,6-bisphosphatase
FOC13_09880	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
FOC13_09895	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
FOC13_09900	COG2890	protein-(glutamine-N5) methyltransferase activity
FOC13_09915	COG0009	L-threonylcarbamoyladenylate synthase
FOC13_09930	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FOC13_09935	COG2259	Doxx family
FOC13_09940	COG2190	(PTS) system
FOC13_09950	COG0698	ribose 5-phosphate isomerase
FOC13_09985	COG0356	it plays a direct role in the translocation of protons across the membrane
FOC13_10035	COG3300	MHYT domain
FOC13_10035	COG5001	Diguanylate cyclase
FOC13_10040	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FOC13_10050	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FOC13_10055	COG0649	NAD binding
FOC13_10070	COG0839	Belongs to the complex I subunit 6 family
FOC13_10080	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
FOC13_10085	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FOC13_10090	COG1007	ATP synthesis coupled electron transport
FOC13_10095	COG4836	Membrane
FOC13_10105	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
FOC13_10110	COG2385	sporulation resulting in formation of a cellular spore
FOC13_10115	COG4555	ABC transporter
FOC13_10120	COG3279	Response regulator of the LytR AlgR family
FOC13_10135	COG0739	heme binding
FOC13_10150	COG1609	Transcriptional regulator
FOC13_10195	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
FOC13_10200	COG1682	transport, permease protein
FOC13_10205	COG1134	teichoic acid transport
FOC13_10210	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
FOC13_10225	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FOC13_10230	COG0745	RESPONSE REGULATOR receiver
FOC13_10235	COG5002	protein histidine kinase activity
FOC13_10270	COG1136	(ABC) transporter
FOC13_10275	COG0577	efflux transmembrane transporter activity
FOC13_10285	COG1191	sigma factor activity
FOC13_10315	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
FOC13_10320	COG4715	Zinc finger, swim domain protein
FOC13_10345	COG1388	LysM domain
FOC13_10345	COG3584	3D domain protein
FOC13_10350	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FOC13_10365	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FOC13_10380	COG1368	sulfuric ester hydrolase activity
FOC13_10390	COG2389	metal-binding protein
FOC13_10400	COG1620	l-lactate permease
FOC13_10410	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
FOC13_10415	COG1294	oxidase, subunit
FOC13_10420	COG1271	oxidase subunit
FOC13_10435	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
FOC13_10440	COG0583	DNA-binding transcription factor activity
FOC13_10445	COG1511	domain protein
FOC13_10450	COG0346	lactoylglutathione lyase activity
FOC13_10460	COG1301	dicarboxylic acid transport
FOC13_10465	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FOC13_10475	COG1447	Phosphotransferase system cellobiose-specific component IIA
FOC13_10480	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
FOC13_10485	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
FOC13_10495	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FOC13_10500	COG1447	Phosphotransferase system cellobiose-specific component IIA
FOC13_10505	COG1486	melibiose metabolic process
FOC13_10510	COG3394	polysaccharide catabolic process
FOC13_10525	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
FOC13_10525	COG3933	PFAM sigma-54 factor interaction domain-containing protein
FOC13_10535	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FOC13_10540	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
FOC13_10545	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
FOC13_10550	COG1316	TRANSCRIPTIONal
FOC13_10555	COG1739	Uncharacterized protein family UPF0029
FOC13_10560	COG1307	EDD domain protein, DegV family
FOC13_10565	COG1733	regulation of RNA biosynthetic process
FOC13_10570	COG1388	LysM domain
FOC13_10570	COG0791	NLP P60 protein
FOC13_10575	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
FOC13_10580	COG1040	competence protein
FOC13_10585	COG1278	Cold shock
FOC13_10590	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
FOC13_10595	COG0653	protein targeting
FOC13_10615	COG2884	Cell division ATP-binding protein ftsE
FOC13_10620	COG2177	Part of the ABC transporter FtsEX involved in
FOC13_10625	COG0793	Belongs to the peptidase S41A family
FOC13_10625	COG3409	Peptidoglycan-binding domain 1 protein
FOC13_10630	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FOC13_10635	COG1132	(ABC) transporter
FOC13_10650	COG0655	NAD(P)H dehydrogenase (quinone) activity
FOC13_10660	COG0583	DNA-binding transcription factor activity
FOC13_10665	COG2855	membrane
FOC13_10690	COG0789	Transcriptional regulator
FOC13_10710	COG0556	nucleotide-excision repair
FOC13_10715	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
FOC13_10725	COG1950	PFAM Membrane protein of
FOC13_10745	COG0110	maltose O-acetyltransferase activity
FOC13_10750	COG0457	Tetratricopeptide repeat
FOC13_10755	COG0492	ferredoxin-NADP+ reductase activity
FOC13_10765	COG1051	belongs to the nudix hydrolase family
FOC13_10775	COG0391	Required for morphogenesis under gluconeogenic growth conditions
FOC13_10785	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOC13_10790	COG0740	serine-type endopeptidase activity
FOC13_10795	COG2323	membrane
FOC13_10810	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FOC13_10835	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
FOC13_10850	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FOC13_10860	COG0149	triose-phosphate isomerase activity
FOC13_10865	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
FOC13_10875	COG4974	Belongs to the 'phage' integrase family
FOC13_10900	COG4695	Portal protein
FOC13_10995	COG1346	cytolysis
FOC13_11000	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FOC13_11005	COG1647	Serine aminopeptidase, S33
FOC13_11010	COG0557	exoribonuclease II activity
FOC13_11060	COG3223	Belongs to the PsiE family
FOC13_11065	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC13_11080	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
FOC13_11085	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
FOC13_11095	COG0840	transmembrane signaling receptor activity
FOC13_11095	COG3290	protein histidine kinase activity
FOC13_11105	COG0812	UDP-N-acetylmuramate dehydrogenase activity
FOC13_11110	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
FOC13_11115	COG1252	NADH dehydrogenase
FOC13_11125	COG1733	regulation of RNA biosynthetic process
FOC13_11130	COG2814	Major facilitator Superfamily
FOC13_11135	COG0656	L-ascorbic acid biosynthetic process
FOC13_11150	COG2910	NAD(P)H-binding
FOC13_11155	COG1115	amino acid carrier protein
FOC13_11160	COG1115	amino acid carrier protein
FOC13_11165	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FOC13_11170	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FOC13_11190	COG1611	Belongs to the LOG family
FOC13_11205	COG0783	Belongs to the Dps family
FOC13_11210	COG1115	amino acid carrier protein
FOC13_11215	COG0490	domain, Protein
FOC13_11220	COG0475	glutathione-regulated potassium exporter activity
FOC13_11235	COG1741	Belongs to the pirin family
FOC13_11240	COG3227	Zinc metalloprotease (Elastase)
FOC13_11245	COG2151	metal-sulfur cluster biosynthetic enzyme
FOC13_11260	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOC13_11270	COG5002	protein histidine kinase activity
FOC13_11275	COG0745	RESPONSE REGULATOR receiver
FOC13_11280	COG1376	ErfK ybiS ycfS ynhG family protein
FOC13_11290	COG0586	Pfam SNARE associated Golgi protein
FOC13_11325	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC13_11335	COG0706	membrane insertase activity
FOC13_11345	COG0531	amino acid
FOC13_11350	COG2814	Major facilitator Superfamily
FOC13_11365	COG0840	transmembrane signaling receptor activity
FOC13_11370	COG0011	TIGRFAM Protein of
FOC13_11385	COG1686	Belongs to the peptidase S11 family
FOC13_11395	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC13_11395	COG1024	Enoyl-CoA hydratase
FOC13_11400	COG0183	Belongs to the thiolase family
FOC13_11405	COG1960	acyl-CoA dehydrogenase activity
FOC13_11410	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC13_11415	COG1309	transcriptional regulator
FOC13_11435	COG0039	L-malate dehydrogenase activity
FOC13_11480	COG1393	Belongs to the ArsC family
FOC13_11495	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
FOC13_11500	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC13_11510	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FOC13_11515	COG2011	ABC-type metal ion transport system permease component
FOC13_11520	COG1464	Belongs to the NlpA lipoprotein family
FOC13_11525	COG1464	Belongs to the NlpA lipoprotein family
FOC13_11530	COG0396	ATPase activity
FOC13_11535	COG0719	Fe-S assembly protein
FOC13_11540	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
FOC13_11545	COG0822	iron-sulfur transferase activity
FOC13_11550	COG0719	Fe-S assembly protein
FOC13_11560	COG1695	Transcriptional regulator
FOC13_11565	COG0737	Belongs to the 5'-nucleotidase family
FOC13_11570	COG3377	Domain of unknown function (DUF1805)
FOC13_11580	COG0739	heme binding
FOC13_11605	COG4377	Putative membrane peptidase family (DUF2324)
FOC13_11610	COG0789	Transcriptional regulator
FOC13_11620	COG4470	Protein conserved in bacteria
FOC13_11635	COG1494	fructose-1,6-bisphosphatase
FOC13_11640	COG2445	Protein of unknown function DUF86
FOC13_11650	COG0647	UMP catabolic process
FOC13_11655	COG2249	NAD(P)H dehydrogenase (quinone) activity
FOC13_11665	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
FOC13_11670	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
FOC13_11680	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
FOC13_11685	COG4837	Protein of unknown function (DUF1462)
FOC13_11725	COG2824	Alkylphosphonate utilization operon protein PhnA
FOC13_11730	COG0390	transport system, permease component
FOC13_11745	COG1252	NADH dehydrogenase
FOC13_11760	COG0316	Belongs to the HesB IscA family
FOC13_11780	COG1683	Conserved Protein
FOC13_11795	COG3708	Transcriptional regulator
FOC13_11810	COG1252	NADH dehydrogenase
FOC13_11825	COG3584	3D domain protein
FOC13_11840	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FOC13_11845	COG1210	Utp--glucose-1-phosphate uridylyltransferase
FOC13_11855	COG1268	BioY protein
FOC13_11865	COG2050	protein possibly involved in aromatic compounds catabolism
FOC13_11870	COG0423	glycine-tRNA ligase activity
FOC13_11885	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
FOC13_11890	COG5018	Exonuclease
FOC13_11905	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
FOC13_11915	COG2267	carboxylic ester hydrolase activity
FOC13_11920	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FOC13_11925	COG1522	sequence-specific DNA binding
FOC13_11930	COG0436	Aminotransferase
FOC13_11935	COG1098	S1 RNA binding domain
FOC13_11940	COG2155	Conserved Protein
FOC13_11945	COG0166	Belongs to the GPI family
FOC13_11955	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FOC13_11960	COG1285	pathogenesis
FOC13_11995	COG0544	peptidyl-prolyl cis-trans isomerase activity
FOC13_12090	COG0039	L-malate dehydrogenase activity
FOC13_12110	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
FOC13_12115	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
FOC13_12120	COG0297	glycogen (starch) synthase activity
FOC13_12125	COG0058	SHG alpha-glucan phosphorylase activity
FOC13_12140	COG1278	Cold shock
FOC13_12145	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
FOC13_12150	COG1575	Belongs to the MenA family. Type 1 subfamily
FOC13_12155	COG1169	isochorismate synthase
FOC13_12160	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
FOC13_12165	COG0596	Alpha beta hydrolase
FOC13_12170	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
FOC13_12180	COG4948	Mandelate Racemase Muconate Lactonizing
FOC13_12210	COG3964	amidohydrolase
FOC13_12250	COG1136	(ABC) transporter
FOC13_12255	COG0577	efflux transmembrane transporter activity
FOC13_12265	COG2205	protein histidine kinase activity
FOC13_12270	COG0745	RESPONSE REGULATOR receiver
FOC13_12275	COG2207	Transcriptional regulator
FOC13_12275	COG3708	Transcriptional regulator
FOC13_12280	COG1136	(ABC) transporter
FOC13_12285	COG0577	efflux transmembrane transporter activity
FOC13_12295	COG0586	Pfam SNARE associated Golgi protein
FOC13_12330	COG1597	lipid kinase activity
FOC13_12360	COG0745	RESPONSE REGULATOR receiver
FOC13_12365	COG5002	protein histidine kinase activity
FOC13_12400	COG1842	Phage shock protein A
FOC13_12425	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC13_12445	COG1294	oxidase, subunit
FOC13_12450	COG1271	oxidase subunit
FOC13_12455	COG0288	reversible hydration of carbon dioxide
FOC13_12485	COG0494	nUDIX hydrolase
FOC13_12510	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC13_12515	COG1116	anion transmembrane transporter activity
FOC13_12520	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FOC13_12540	COG2267	carboxylic ester hydrolase activity
FOC13_12545	COG4191	Histidine kinase
FOC13_12550	COG5002	protein histidine kinase activity
FOC13_12555	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
FOC13_12605	COG0521	Mo-molybdopterin cofactor biosynthetic process
FOC13_12615	COG0438	transferase activity, transferring glycosyl groups
FOC13_12620	COG0671	phosphoesterase, PA-phosphatase related
FOC13_12625	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
FOC13_12630	COG2267	carboxylic ester hydrolase activity
FOC13_12650	COG1794	racemase activity, acting on amino acids and derivatives
FOC13_12660	COG1131	(ABC) transporter
FOC13_12665	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
FOC13_12670	COG1242	4 iron, 4 sulfur cluster binding
FOC13_12690	COG1136	(ABC) transporter
FOC13_12700	COG0582	viral genome integration into host DNA
FOC13_12705	COG0490	domain, Protein
FOC13_12710	COG0475	glutathione-regulated potassium exporter activity
FOC13_12715	COG2814	Major facilitator Superfamily
FOC13_12755	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FOC13_12765	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FOC13_12790	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FOC13_12800	COG0303	'Molybdopterin
FOC13_12805	COG1763	Mo-molybdopterin cofactor biosynthetic process
FOC13_12810	COG0314	molybdopterin synthase activity
FOC13_12825	COG4975	Glucose uptake
FOC13_12835	COG1329	Transcriptional regulator
FOC13_12855	COG3832	glyoxalase III activity
FOC13_12865	COG2814	Major facilitator Superfamily
FOC13_12870	COG2081	HI0933 family
FOC13_12875	COG2244	polysaccharide biosynthetic process
FOC13_12880	COG1187	pseudouridine synthase activity
FOC13_12885	COG1349	DNA-binding transcription factor activity
FOC13_12900	COG1523	belongs to the glycosyl hydrolase 13 family
FOC13_12905	COG0510	thiamine kinase activity
FOC13_12920	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC13_12930	COG1363	Peptidase, m42
FOC13_12935	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
FOC13_12940	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC13_12945	COG4848	Belongs to the UPF0354 family
FOC13_12950	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOC13_12960	COG1674	ftsk spoiiie
FOC13_12975	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC13_12995	COG2309	aminopeptidase activity
FOC13_13005	COG3118	belongs to the thioredoxin family
FOC13_13010	COG4851	CamS sex pheromone cAM373 precursor
FOC13_13015	COG1609	Transcriptional regulator
FOC13_13050	COG0666	response to abiotic stimulus
FOC13_13060	COG0745	RESPONSE REGULATOR receiver
FOC13_13070	COG0123	including yeast histone deacetylase and acetoin utilization protein
FOC13_13075	COG0517	IMP dehydrogenase activity
FOC13_13080	COG0454	-acetyltransferase
FOC13_13085	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FOC13_13100	COG1595	DNA-templated transcription, initiation
FOC13_13110	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
FOC13_13130	COG0626	cystathionine gamma-synthase activity
FOC13_13135	COG1956	GAF domain-containing protein
FOC13_13145	COG0697	spore germination
FOC13_13150	COG0583	DNA-binding transcription factor activity
FOC13_13160	COG1104	cysteine desulfurase activity
FOC13_13175	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FOC13_13185	COG1574	metal-dependent hydrolase with the TIM-barrel fold
FOC13_13190	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
FOC13_13200	COG3874	Sporulation protein YtfJ
FOC13_13205	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
FOC13_13210	COG0827	DNA restriction-modification system
FOC13_13215	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
FOC13_13235	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC13_13275	COG0589	response to stress
FOC13_13280	COG1028	Short-chain dehydrogenase reductase Sdr
FOC13_13295	COG1476	TRANSCRIPTIONal
FOC13_13305	COG0662	Cupin 2, conserved barrel domain protein
FOC13_13310	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC13_13345	COG0006	proline dipeptidase activity
FOC13_13360	COG4109	DRTGG domain
FOC13_13380	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
FOC13_13395	COG0587	DNA-directed DNA polymerase activity
FOC13_13400	COG0281	malic enzyme
FOC13_13405	COG1725	Transcriptional regulator
FOC13_13430	COG3030	protein affecting phage T7 exclusion by the F plasmid
FOC13_13435	COG0628	permease
FOC13_13445	COG0372	Belongs to the citrate synthase family
FOC13_13450	COG0538	isocitrate dehydrogenase activity
FOC13_13465	COG0745	RESPONSE REGULATOR receiver
FOC13_13470	COG5002	protein histidine kinase activity
FOC13_13475	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FOC13_13475	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FOC13_13480	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
FOC13_13485	COG1971	Probably functions as a manganese efflux pump
FOC13_13490	COG0237	dephospho-CoA kinase activity
FOC13_13495	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FOC13_13505	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
FOC13_13515	COG3611	Membrane attachment protein
FOC13_13520	COG1484	DNA-dependent DNA replication
FOC13_13530	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
FOC13_13535	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
FOC13_13555	COG1363	Peptidase, m42
FOC13_13560	COG1309	transcriptional regulator
FOC13_13565	COG1566	PFAM secretion protein HlyD family protein
FOC13_13570	COG2814	Major facilitator Superfamily
FOC13_13595	COG1418	mRNA catabolic process
FOC13_13605	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FOC13_13615	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOC13_13615	COG0072	phenylalanine-tRNA ligase activity
FOC13_13620	COG0017	Asparaginyl-tRNA synthetase
FOC13_13650	COG1286	toxin biosynthetic process
FOC13_13655	COG1796	DNA polymerase
FOC13_13655	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
FOC13_13665	COG1187	pseudouridine synthase activity
FOC13_13670	COG1114	Component of the transport system for branched-chain amino acids
FOC13_13675	COG5386	Cell surface protein
FOC13_13685	COG5386	Cell surface protein
FOC13_13700	COG1120	ATPase activity
FOC13_13705	COG4509	Sortase family
FOC13_13720	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
FOC13_13725	COG4895	conserved protein (DUF2196)
FOC13_13730	COG0745	RESPONSE REGULATOR receiver
FOC13_13735	COG2205	protein histidine kinase activity
FOC13_13740	COG1131	(ABC) transporter
FOC13_13765	COG2318	DinB family
FOC13_13785	COG0318	PFAM AMP-dependent synthetase and ligase
FOC13_13790	COG1309	transcriptional regulator
FOC13_13795	COG1024	Enoyl-CoA hydratase
FOC13_13800	COG2086	electron transfer activity
FOC13_13805	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
FOC13_13810	COG3118	belongs to the thioredoxin family
FOC13_13820	COG1719	4-vinyl reductase, 4VR
FOC13_13825	COG2009	succinate dehydrogenase
FOC13_13830	COG1053	succinate dehydrogenase
FOC13_13835	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
FOC13_13840	COG0824	Thioesterase
FOC13_13845	COG1876	peptidase activity
FOC13_13850	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
FOC13_13860	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
FOC13_13865	COG4152	abc transporter atp-binding protein
FOC13_13870	COG1668	transmembrane transport
FOC13_13875	COG1959	2 iron, 2 sulfur cluster binding
FOC13_13885	COG0697	spore germination
FOC13_13890	COG1396	sequence-specific DNA binding
FOC13_13895	COG1983	PspC domain protein
FOC13_13910	COG3279	Response regulator of the LytR AlgR family
FOC13_13920	COG4608	Belongs to the ABC transporter superfamily
FOC13_13925	COG0444	Belongs to the ABC transporter superfamily
FOC13_13945	COG0402	S-adenosylhomocysteine deaminase activity
FOC13_13950	COG0402	S-adenosylhomocysteine deaminase activity
FOC13_13960	COG2233	PERMEase
FOC13_13965	COG2197	response regulator
FOC13_13980	COG1309	transcriptional regulator
FOC13_14000	COG5401	PFAM Sporulation and spore germination
FOC13_14010	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
FOC13_14015	COG0622	Phosphoesterase
FOC13_14060	COG1067	ATP-dependent peptidase activity
FOC13_14060	COG0470	DNA polymerase III
FOC13_14075	COG1764	response to oxidative stress
FOC13_14080	COG1846	Transcriptional regulator
FOC13_14090	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FOC13_14100	COG1587	Uroporphyrinogen-III synthase
FOC13_14105	COG0113	porphobilinogen synthase activity
FOC13_14115	COG1388	LysM domain
FOC13_14125	COG0525	valine-tRNA ligase activity
FOC13_14130	COG0285	dihydrofolate synthase activity
FOC13_14150	COG1077	Cell shape determining protein MreB Mrl
FOC13_14155	COG1792	Involved in formation and maintenance of cell shape
FOC13_14170	COG2894	cell division
FOC13_14175	COG0739	heme binding
FOC13_14180	COG1994	Peptidase M50
FOC13_14185	COG1530	ribonuclease E activity
FOC13_14195	COG2868	ribosomal protein
FOC13_14210	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
FOC13_14215	COG0745	RESPONSE REGULATOR receiver
FOC13_14225	COG1136	(ABC) transporter
FOC13_14230	COG0577	efflux transmembrane transporter activity
FOC13_14235	COG0577	efflux transmembrane transporter activity
FOC13_14240	COG0077	Prephenate dehydratase
FOC13_14245	COG2258	MOSC domain
FOC13_14250	COG1827	regulation of RNA biosynthetic process
FOC13_14255	COG1104	cysteine desulfurase activity
FOC13_14260	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
FOC13_14265	COG0157	Belongs to the NadC ModD family
FOC13_14290	COG0640	Transcriptional regulator
FOC13_14295	COG0697	spore germination
FOC13_14300	COG0697	spore germination
FOC13_14310	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
FOC13_14340	COG1862	Preprotein translocase
FOC13_14350	COG2323	membrane
FOC13_14355	COG2244	polysaccharide biosynthetic process
FOC13_14365	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FOC13_14365	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FOC13_14370	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
FOC13_14375	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
FOC13_14375	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
FOC13_14385	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FOC13_14395	COG0124	histidyl-tRNA synthetase
FOC13_14405	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
FOC13_14415	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
FOC13_14420	COG1959	2 iron, 2 sulfur cluster binding
FOC13_14425	COG1104	cysteine desulfurase activity
FOC13_14430	COG0482	sulfurtransferase activity
FOC13_14440	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
FOC13_14460	COG0628	permease
FOC13_14470	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
FOC13_14490	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
FOC13_14520	COG0768	penicillin binding
FOC13_14545	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FOC13_14550	COG0626	cystathionine gamma-synthase activity
FOC13_14555	COG1012	belongs to the aldehyde dehydrogenase family
FOC13_14555	COG1454	alcohol dehydrogenase
FOC13_14565	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FOC13_14605	COG2259	Doxx family
FOC13_14620	COG3186	Phenylalanine-4-hydroxylase
FOC13_14625	COG1404	Belongs to the peptidase S8 family
FOC13_14660	COG2267	carboxylic ester hydrolase activity
FOC13_14670	COG1785	Belongs to the alkaline phosphatase family
FOC13_14680	COG2357	RelA SpoT domain protein
FOC13_14685	COG0778	Nitroreductase
FOC13_14695	COG1595	DNA-templated transcription, initiation
FOC13_14705	COG1191	sigma factor activity
FOC13_14720	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
FOC13_14725	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
FOC13_14735	COG1534	Rna-binding protein
FOC13_14745	COG1713	HD superfamily hydrolase involved in NAD metabolism
FOC13_14750	COG0799	negative regulation of ribosome biogenesis
FOC13_14755	COG2226	methyltransferase
FOC13_14760	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
FOC13_14765	COG1555	photosystem II stabilization
FOC13_14765	COG1596	polysaccharide export
FOC13_14770	COG2131	deaminase
FOC13_14775	COG2333	competence protein COMEC
FOC13_14775	COG0658	competence protein
FOC13_14785	COG1466	dna polymerase III delta subunit
FOC13_14810	COG1733	regulation of RNA biosynthetic process
FOC13_14815	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FOC13_14825	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
FOC13_14845	COG1385	rRNA (uridine-N3-)-methyltransferase activity
FOC13_14850	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
FOC13_14860	COG1610	YqeY-like protein
FOC13_14875	COG1702	phosphate starvation-inducible protein PhoH
FOC13_14880	COG1480	7TM receptor with intracellular HD hydrolase
FOC13_14890	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
FOC13_14895	COG0295	cytidine deaminase activity
FOC13_14900	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
FOC13_14915	COG0517	IMP dehydrogenase activity
FOC13_14925	COG0358	DNA primase activity
FOC13_14930	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FOC13_14935	COG2010	Cytochrome c
FOC13_14940	COG2384	SAM-dependent methyltransferase
FOC13_14945	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
FOC13_14975	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC13_14980	COG1121	(ABC) transporter
FOC13_14985	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FOC13_14990	COG0735	belongs to the Fur family
FOC13_15015	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FOC13_15020	COG0477	Major facilitator Superfamily
FOC13_15030	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
FOC13_15035	COG0573	inorganic phosphate transmembrane transporter activity
FOC13_15040	COG0581	inorganic phosphate transmembrane transporter activity
FOC13_15045	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
FOC13_15050	COG0704	Plays a role in the regulation of phosphate uptake
FOC13_15055	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
FOC13_15065	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
FOC13_15070	COG4483	Protein conserved in bacteria
FOC13_15075	COG1940	carbohydrate kinase activity
FOC13_15085	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC13_15105	COG0626	cystathionine gamma-synthase activity
FOC13_15110	COG0626	cystathionine gamma-synthase activity
FOC13_15115	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
FOC13_15115	COG0646	methionine synthase
FOC13_15120	COG1410	methionine synthase
FOC13_15120	COG0646	methionine synthase
FOC13_15125	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
FOC13_15175	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FOC13_15180	COG1459	type II secretion system
FOC13_15190	COG4970	Tfp pilus assembly protein FimT
FOC13_15245	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
FOC13_15275	COG1725	Transcriptional regulator
FOC13_15280	COG1131	(ABC) transporter
FOC13_15315	COG2076	Multidrug Resistance protein
FOC13_15320	COG2076	Multidrug Resistance protein
FOC13_15330	COG1609	Transcriptional regulator
FOC13_15335	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FOC13_15340	COG0095	Lipoate-protein ligase
FOC13_15360	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FOC13_15370	COG3872	metal-dependent enzyme
FOC13_15385	COG0006	proline dipeptidase activity
FOC13_15410	COG3854	ATPases associated with a variety of cellular activities
FOC13_15455	COG0511	ligase activity, forming carbon-carbon bonds
FOC13_15460	COG0439	Biotin carboxylase
FOC13_15465	COG1302	Protein conserved in bacteria
FOC13_15490	COG0142	geranyltranstransferase activity
FOC13_15500	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
FOC13_15510	COG0497	DNA recombination
FOC13_15515	COG0750	zinc metalloprotease
FOC13_15520	COG0745	RESPONSE REGULATOR receiver
FOC13_15530	COG3093	addiction module antidote protein HigA
FOC13_15535	COG0584	glycerophosphoryl diester phosphodiesterase
FOC13_15545	COG3829	transcription factor binding
FOC13_15545	COG3290	protein histidine kinase activity
FOC13_15550	COG0280	phosphate acetyltransferase
FOC13_15555	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
FOC13_15565	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FOC13_15570	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
FOC13_15575	COG0022	dehydrogenase e1 component
FOC13_15580	COG0508	dehydrogenase complex catalyzes the overall conversion of
FOC13_15585	COG0772	Belongs to the SEDS family
FOC13_15605	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC13_15610	COG0765	amino acid transport
FOC13_15615	COG1126	abc transporter atp-binding protein
FOC13_15620	COG4129	membrane
FOC13_15625	COG1376	ErfK ybiS ycfS ynhG family protein
FOC13_15640	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC13_15645	COG2195	Cleaves the N-terminal amino acid of tripeptides
FOC13_15655	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
FOC13_15675	COG1760	l-serine dehydratase
FOC13_15680	COG1760	l-serine dehydratase
FOC13_15685	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
FOC13_15695	COG0300	oxidoreductase activity
FOC13_15710	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
FOC13_15720	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FOC13_15740	COG1522	sequence-specific DNA binding
FOC13_15750	COG0737	Belongs to the 5'-nucleotidase family
FOC13_15765	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FOC13_15775	COG0156	8-amino-7-oxononanoate synthase activity
FOC13_15780	COG1073	alpha beta
FOC13_15780	COG2226	methyltransferase
FOC13_15785	COG4106	trans-aconitate 2-methyltransferase activity
FOC13_15790	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
FOC13_15810	COG0307	riboflavin synthase, alpha
FOC13_15815	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FOC13_15815	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FOC13_15830	COG1073	alpha beta
FOC13_15835	COG0456	acetyltransferase
FOC13_15840	COG1609	Transcriptional regulator
FOC13_15845	COG2056	Na+-H+ antiporter family
FOC13_15850	COG0596	Alpha beta hydrolase
FOC13_15860	COG4085	toxin activity
FOC13_15860	COG1525	nuclease
FOC13_15860	COG0737	Belongs to the 5'-nucleotidase family
FOC13_15870	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
FOC13_15870	COG0456	acetyltransferase
FOC13_15875	COG0656	L-ascorbic acid biosynthetic process
FOC13_15880	COG0667	Aldo Keto reductase
FOC13_15900	COG1300	Membrane
FOC13_15905	COG0735	belongs to the Fur family
FOC13_15915	COG4974	Belongs to the 'phage' integrase family
FOC13_15940	COG0598	Magnesium transport protein CorA
FOC13_15955	COG1846	Transcriptional regulator
FOC13_15970	COG1131	(ABC) transporter
FOC13_15975	COG1725	Transcriptional regulator
FOC13_15980	COG1686	Belongs to the peptidase S11 family
FOC13_16000	COG0733	neurotransmitter:sodium symporter activity
FOC13_16025	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FOC13_16040	COG0697	spore germination
FOC13_16045	COG0561	phosphatase activity
FOC13_16050	COG4086	secreted protein
FOC13_16055	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
FOC13_16060	COG0456	acetyltransferase
FOC13_16065	COG1547	Domain of unknown function (DUF309)
FOC13_16090	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
FOC13_16110	COG3711	transcriptional antiterminator
FOC13_16115	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOC13_16115	COG2190	(PTS) system
FOC13_16115	COG1263	PTS System
FOC13_16140	COG0778	Nitroreductase
FOC13_16145	COG3706	GGDEF domain
FOC13_16165	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
FOC13_16185	COG0436	Aminotransferase
FOC13_16190	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FOC13_16210	COG1028	Short-chain dehydrogenase reductase Sdr
FOC13_16215	COG1695	Transcriptional regulator
FOC13_16255	COG0183	Belongs to the thiolase family
FOC13_16295	COG3842	ATPase activity
FOC13_16300	COG0366	Alpha amylase catalytic
FOC13_16310	COG2182	Extracellular solute-binding protein
FOC13_16315	COG1175	transmembrane transport
FOC13_16320	COG3833	ABC-type maltose transport systems, permease component
FOC13_16325	COG1609	Transcriptional regulator
FOC13_16330	COG0436	Aminotransferase
FOC13_16340	COG2205	protein histidine kinase activity
FOC13_16350	COG3209	COG3209 Rhs family protein
FOC13_16370	COG2814	Major facilitator Superfamily
FOC13_16405	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
FOC13_16415	COG1408	metallophosphoesterase
FOC13_16420	COG1028	Short-chain dehydrogenase reductase Sdr
FOC13_16425	COG2200	EAL domain
FOC13_16440	COG4703	Protein of unknown function (DUF1797)
FOC13_16445	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
FOC13_16455	COG0517	IMP dehydrogenase activity
FOC13_16460	COG0583	DNA-binding transcription factor activity
FOC13_16480	COG0569	domain protein
FOC13_16485	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
FOC13_16500	COG0242	peptide deformylase activity
FOC13_16510	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
FOC13_16515	COG0022	dehydrogenase e1 component
FOC13_16520	COG0508	dehydrogenase complex catalyzes the overall conversion of
FOC13_16565	COG1982	Orn Lys Arg decarboxylase major
FOC13_16585	COG0483	inositol monophosphate 1-phosphatase activity
FOC13_16610	COG4896	Protein conserved in bacteria
FOC13_16620	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
FOC13_16625	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
FOC13_16630	COG4838	Belongs to the UPF0358 family
FOC13_16635	COG0772	Belongs to the SEDS family
FOC13_16640	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
FOC13_16675	COG3336	cytochrome c oxidase
FOC13_16690	COG2340	Cysteine-rich secretory protein family
FOC13_16705	COG0406	alpha-ribazole phosphatase activity
FOC13_16710	COG3679	Belongs to the UPF0342 family
FOC13_16725	COG0742	ribosomal rna small subunit methyltransferase
FOC13_16735	COG3314	Sporulation integral membrane protein YlbJ
FOC13_16740	COG1752	Esterase of the alpha-beta hydrolase superfamily
FOC13_16745	COG3480	Lon protease (S16) C-terminal proteolytic domain
FOC13_16755	COG0582	viral genome integration into host DNA
FOC13_16765	COG1396	sequence-specific DNA binding
FOC13_16775	COG1396	sequence-specific DNA binding
FOC13_16795	COG1484	DNA-dependent DNA replication
FOC13_16820	COG1191	sigma factor activity
FOC13_16895	COG0582	viral genome integration into host DNA
FOC13_16920	COG4626	Terminase
FOC13_16920	COG1802	Transcriptional regulator
FOC13_17010	COG4824	toxin secretion phage lysis holin
FOC13_17060	COG1399	metal-binding, possibly nucleic acid-binding protein
FOC13_17085	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
FOC13_17100	COG4839	cell division protein FtsL
FOC13_17110	COG0768	penicillin binding
FOC13_17115	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FOC13_17130	COG0772	Belongs to the SEDS family
FOC13_17135	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
FOC13_17140	COG0812	UDP-N-acetylmuramate dehydrogenase activity
FOC13_17145	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
FOC13_17150	COG0849	cell division
FOC13_17155	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
FOC13_17165	COG1191	sigma factor activity
FOC13_17170	COG1191	sigma factor activity
FOC13_17175	COG1873	PFAM PRC-barrel domain
FOC13_17185	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
FOC13_17195	COG0762	integral membrane protein
FOC13_17200	COG2302	S4 RNA-binding domain
FOC13_17205	COG3599	regulation of cell shape
FOC13_17225	COG0564	pseudouridine synthase activity
FOC13_17250	COG0505	Belongs to the CarA family
FOC13_17290	COG3069	C4-dicarboxylate transmembrane transporter activity
FOC13_17305	COG0006	proline dipeptidase activity
FOC13_17315	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
FOC13_17320	COG1561	YicC-like family, N-terminal region
FOC13_17330	COG0194	GDP metabolic process
FOC13_17340	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
FOC13_17345	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
FOC13_17350	COG0242	peptide deformylase activity
FOC13_17360	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FOC13_17360	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FOC13_17370	COG0631	protein serine/threonine phosphatase activity
FOC13_17375	COG0515	serine threonine protein kinase
FOC13_17375	COG2815	serine threonine protein kinase
FOC13_17380	COG1162	GTPase activity
FOC13_17385	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
FOC13_17390	COG1564	THIamine pyrophosphokinase
FOC13_17405	COG1302	Protein conserved in bacteria
FOC13_17410	COG1461	Dihydroxyacetone kinase
FOC13_17415	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
FOC13_17430	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
FOC13_17435	COG1028	Short-chain dehydrogenase reductase Sdr
FOC13_17450	COG1196	nuclear chromosome segregation
FOC13_17455	COG0552	protein localization to endoplasmic reticulum
FOC13_17465	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
FOC13_17475	COG1837	Belongs to the UPF0109 family
FOC13_17515	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
FOC13_17525	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FOC13_17535	COG4974	Belongs to the 'phage' integrase family
FOC13_17565	COG0528	UMP kinase activity
FOC13_17575	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
FOC13_17580	COG4589	Belongs to the CDS family
FOC13_17585	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
FOC13_17590	COG0750	zinc metalloprotease
FOC13_17610	COG0195	Participates in both transcription termination and antitermination
FOC13_17615	COG2740	Nucleic-acid-binding protein implicated in transcription termination
FOC13_17620	COG1358	cellular component organization or biogenesis
FOC13_17630	COG1550	Protein conserved in bacteria
FOC13_17640	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
FOC13_17645	COG0196	riboflavin kinase activity
FOC13_17660	COG0726	polysaccharide deacetylase
FOC13_17665	COG0612	Peptidase, M16
FOC13_17670	COG1873	PFAM PRC-barrel domain
FOC13_17675	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FOC13_17680	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
FOC13_17685	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FOC13_17690	COG0527	aspartate kinase activity
FOC13_17700	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
FOC13_17705	COG0740	serine-type endopeptidase activity
FOC13_17715	COG1674	ftsk spoiiie
FOC13_17720	COG2188	Transcriptional regulator
FOC13_17745	COG0612	Peptidase, M16
FOC13_17750	COG0612	Peptidase, M16
FOC13_17755	COG0300	oxidoreductase activity
FOC13_17770	COG1426	Protein conserved in bacteria
FOC13_17775	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
FOC13_17800	COG1692	metallophosphoesterase
FOC13_17805	COG2359	stage V sporulation protein S
FOC13_17815	COG0674	pyruvate-flavodoxin oxidoreductase activity
FOC13_17815	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
FOC13_17820	COG1013	pyruvate-flavodoxin oxidoreductase activity
FOC13_17825	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
FOC13_17830	COG4550	Control of competence regulator ComK, YlbF/YmcA
FOC13_17875	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
FOC13_17885	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
FOC13_17890	COG1368	sulfuric ester hydrolase activity
FOC13_17895	COG0562	UDP-galactopyranose mutase
FOC13_17900	COG3773	Cell wall hydrolase
FOC13_17905	COG1404	Belongs to the peptidase S8 family
FOC13_17925	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
FOC13_17930	COG0508	dehydrogenase complex catalyzes the overall conversion of
FOC13_17930	COG0596	Alpha beta hydrolase
FOC13_17935	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC13_17940	COG1380	Effector of murein hydrolase LrgA
FOC13_17945	COG1346	cytolysis
FOC13_17965	COG5001	Diguanylate cyclase
FOC13_17965	COG3300	MHYT domain
FOC13_17970	COG0346	lactoylglutathione lyase activity
FOC13_17975	COG2267	carboxylic ester hydrolase activity
FOC13_17990	COG2364	Membrane
FOC13_18000	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
FOC13_18005	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FOC13_18010	COG2169	Transcriptional regulator
FOC13_18015	COG0708	Exodeoxyribonuclease III
FOC13_18025	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC13_18030	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC13_18035	COG1120	ATPase activity
FOC13_18040	COG2819	hydrolase of the alpha beta superfamily
FOC13_18050	COG1937	Protein conserved in bacteria
FOC13_18055	COG2608	mercury ion transmembrane transporter activity
FOC13_18060	COG2217	Heavy metal translocating P-type atpase
FOC13_18070	COG2116	formate transmembrane transporter activity
FOC13_18075	COG1408	metallophosphoesterase
FOC13_18085	COG1113	amino acid transport
FOC13_18095	COG2322	membrane
FOC13_18105	COG1349	DNA-binding transcription factor activity
FOC13_18110	COG1105	Belongs to the carbohydrate kinase PfkB family
FOC13_18115	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOC13_18115	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FOC13_18115	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FOC13_18120	COG1388	LysM domain
FOC13_18120	COG3584	3D domain protein
FOC13_18150	COG0464	growth
FOC13_18160	COG2860	membrane
FOC13_18170	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
FOC13_18175	COG0789	Transcriptional regulator
FOC13_18180	COG0174	glutamine synthetase
FOC13_18200	COG1396	sequence-specific DNA binding
FOC13_18280	COG1351	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NAD(P)H and FADH(2) as the reductant
FOC13_18320	COG1595	DNA-templated transcription, initiation
FOC13_18465	COG4824	toxin secretion phage lysis holin
FOC13_18470	COG5632	N-Acetylmuramoyl-L-alanine amidase
FOC13_18470	COG3409	Peptidoglycan-binding domain 1 protein
FOC13_18470	COG1388	LysM domain
FOC13_18500	COG1695	Transcriptional regulator
FOC13_18520	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
FOC13_18540	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
FOC13_18545	COG3639	organic phosphonate transmembrane transporter activity
FOC13_18575	COG1132	(ABC) transporter
FOC13_18580	COG1132	(ABC) transporter
FOC13_18595	COG3409	Peptidoglycan-binding domain 1 protein
FOC13_18595	COG5632	N-Acetylmuramoyl-L-alanine amidase
FOC13_18620	COG1346	cytolysis
FOC13_18625	COG1380	Effector of murein hydrolase LrgA
FOC13_18630	COG0583	DNA-binding transcription factor activity
FOC13_18640	COG0785	Cytochrome C biogenesis protein
FOC13_18645	COG4846	Membrane protein involved in cytochrome C biogenesis
FOC13_18695	COG2226	methyltransferase
FOC13_18720	COG0010	Belongs to the arginase family
FOC13_18725	COG1329	Transcriptional regulator
FOC13_18730	COG1902	pentaerythritol trinitrate reductase activity
FOC13_18735	COG0069	glutamate synthase activity
FOC13_18740	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FOC13_18745	COG0346	lactoylglutathione lyase activity
FOC13_18750	COG0400	carboxylic ester hydrolase activity
FOC13_18755	COG5002	protein histidine kinase activity
FOC13_18765	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC13_18815	COG0318	PFAM AMP-dependent synthetase and ligase
FOC13_18820	COG1268	BioY protein
FOC13_18825	COG0318	PFAM AMP-dependent synthetase and ligase
FOC13_18830	COG0183	Belongs to the thiolase family
FOC13_18845	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
FOC13_18875	COG0726	polysaccharide deacetylase
FOC13_18885	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
FOC13_18890	COG2274	protein secretion by the type I secretion system
FOC13_18900	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC13_18930	COG0824	Thioesterase
FOC13_18935	COG4841	protein insertion into membrane
FOC13_18940	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
FOC13_18955	COG0745	RESPONSE REGULATOR receiver
FOC13_18960	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FOC13_18965	COG1832	CoA-binding protein
FOC13_18970	COG0187	DNA topoisomerase II activity
FOC13_18975	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
FOC13_18980	COG0673	inositol 2-dehydrogenase activity
FOC13_18990	COG1131	(ABC) transporter
FOC13_19005	COG1595	DNA-templated transcription, initiation
FOC13_19015	COG1316	TRANSCRIPTIONal
FOC13_19025	COG4166	transmembrane transport
FOC13_19030	COG4166	transmembrane transport
FOC13_19035	COG4166	transmembrane transport
FOC13_19040	COG2226	methyltransferase
FOC13_19080	COG0697	spore germination
FOC13_19085	COG3383	formate dehydrogenase (NAD+) activity
FOC13_19090	COG2427	Protein of unknown function (DUF1641)
FOC13_19095	COG5609	conserved protein (DUF2294)
FOC13_19100	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
FOC13_19110	COG2116	formate transmembrane transporter activity
FOC13_19115	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FOC13_19120	COG0303	'Molybdopterin
FOC13_19125	COG0314	molybdopterin synthase activity
FOC13_19135	COG0489	protein tyrosine kinase activity
FOC13_19150	COG3326	Membrane
FOC13_19155	COG2962	Rard protein
FOC13_19160	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
FOC13_19165	COG1657	PFAM Prenyltransferase squalene oxidase
FOC13_19175	COG1028	Short-chain dehydrogenase reductase Sdr
FOC13_19180	COG1012	belongs to the aldehyde dehydrogenase family
FOC13_19190	COG4145	pantothenate transmembrane transporter activity
FOC13_19205	COG0165	Argininosuccinate lyase
FOC13_19215	COG1028	Short-chain dehydrogenase reductase Sdr
FOC13_19245	COG0716	FMN binding
FOC13_19255	COG1278	Cold shock
FOC13_19280	COG2720	vancomycin resistance protein
FOC13_19285	COG2514	catechol 2,3-dioxygenase activity
FOC13_19300	COG1285	pathogenesis
FOC13_19310	COG1024	Enoyl-CoA hydratase
FOC13_19315	COG1216	Glycosyl transferase, family 2
FOC13_19345	COG0277	FAD linked oxidase domain protein
FOC13_19350	COG0385	Bile acid
FOC13_19360	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
FOC13_19365	COG2808	Putative FMN-binding domain
FOC13_19385	COG0604	alcohol dehydrogenase
FOC13_19390	COG0640	Transcriptional regulator
FOC13_19415	COG0584	glycerophosphoryl diester phosphodiesterase
FOC13_19445	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FOC13_19450	COG1164	Oligoendopeptidase f
FOC13_19470	COG1193	negative regulation of DNA recombination
FOC13_19490	COG0583	DNA-binding transcription factor activity
FOC13_19520	COG0384	phenazine biosynthesis protein PhzF
FOC13_19525	COG3739	integral membrane protein
FOC13_19530	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC13_19535	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC13_19540	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FOC13_19560	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
FOC13_19565	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
FOC13_19595	COG2814	Major facilitator Superfamily
FOC13_19600	COG1113	amino acid transport
FOC13_19640	COG2072	flavoprotein involved in K transport
FOC13_19675	COG3409	Peptidoglycan-binding domain 1 protein
FOC13_19675	COG3757	hydrolase, family 25
FOC13_19680	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC13_19690	COG1151	hydroxylamine reductase activity
FOC13_19715	COG3152	Membrane
FOC13_19735	COG1309	transcriptional regulator
FOC13_19750	COG1191	sigma factor activity
FOC13_19785	COG1733	regulation of RNA biosynthetic process
FOC13_19795	COG0318	PFAM AMP-dependent synthetase and ligase
FOC13_19805	COG1028	Short-chain dehydrogenase reductase Sdr
FOC13_19815	COG0384	phenazine biosynthesis protein PhzF
FOC13_19835	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC13_19850	COG1733	regulation of RNA biosynthetic process
FOC13_19855	COG1733	regulation of RNA biosynthetic process
FOC13_19860	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FOC13_19870	COG2188	Transcriptional regulator
FOC13_19875	COG1733	regulation of RNA biosynthetic process
FOC13_19880	COG1393	Belongs to the ArsC family
FOC13_19905	COG0814	amino acid
FOC13_19910	COG0346	lactoylglutathione lyase activity
FOC13_19925	COG2814	Major facilitator Superfamily
FOC13_19930	COG0656	L-ascorbic acid biosynthetic process
FOC13_19955	COG1028	Short-chain dehydrogenase reductase Sdr
FOC13_19970	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FOC13_19975	COG0604	alcohol dehydrogenase
FOC13_19980	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
FOC13_19985	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
FOC13_19995	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
FOC13_20000	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FOC13_20010	COG1070	Carbohydrate kinase
FOC13_20015	COG2706	6-phosphogluconolactonase activity
FOC13_20020	COG3813	Protein conserved in bacteria
FOC13_20025	COG1357	PFAM Pentapeptide repeats (8 copies)
FOC13_20030	COG0697	spore germination
FOC13_20035	COG0789	Transcriptional regulator
FOC13_20040	COG1253	flavin adenine dinucleotide binding
FOC13_20070	COG0477	Major facilitator Superfamily
FOC13_20080	COG2226	methyltransferase
FOC13_20095	COG0628	permease
FOC13_20100	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
FOC13_20105	COG0180	Tryptophanyl-tRNA synthetase
FOC13_20110	COG1136	(ABC) transporter
FOC13_20120	COG0110	maltose O-acetyltransferase activity
FOC13_20125	COG0738	Major facilitator superfamily
FOC13_20130	COG1940	carbohydrate kinase activity
FOC13_20135	COG0346	lactoylglutathione lyase activity
FOC13_20170	COG1011	Hydrolase
FOC13_20195	COG1131	(ABC) transporter
FOC13_20205	COG1028	Short-chain dehydrogenase reductase Sdr
FOC13_20225	COG0778	Nitroreductase
FOC13_20230	COG1733	regulation of RNA biosynthetic process
FOC13_20245	COG0124	histidyl-tRNA synthetase
FOC13_20250	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FOC13_20255	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
FOC13_20260	COG3620	sequence-specific DNA binding
FOC13_20275	COG2356	endonuclease I
FOC13_20280	COG1288	antiporter activity
FOC13_20285	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FOC13_20300	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
FOC13_20305	COG1122	ATPase activity
FOC13_20335	COG2249	NAD(P)H dehydrogenase (quinone) activity
FOC13_20345	COG2031	fatty acid transporter
FOC13_20355	COG1309	transcriptional regulator
FOC13_20360	COG2076	Multidrug Resistance protein
FOC13_20380	COG1131	(ABC) transporter
FOC13_20385	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
FOC13_20400	COG2814	Major facilitator Superfamily
FOC13_20405	COG1846	Transcriptional regulator
FOC13_20415	COG0477	Major facilitator Superfamily
FOC13_20465	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FOC13_20465	COG2207	Transcriptional regulator
FOC13_20470	COG0662	Cupin 2, conserved barrel domain protein
FOC13_20485	COG1595	DNA-templated transcription, initiation
FOC13_20505	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FOC13_20520	COG0531	amino acid
FOC13_20525	COG1522	sequence-specific DNA binding
FOC13_20530	COG1335	isochorismatase
FOC13_20540	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
FOC13_20545	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FOC13_20555	COG1760	l-serine dehydratase
FOC13_20560	COG1760	l-serine dehydratase
FOC13_20565	COG0814	amino acid
FOC13_20580	COG1309	transcriptional regulator
FOC13_20585	COG2814	Major facilitator Superfamily
FOC13_20605	COG0534	Mate efflux family protein
FOC13_20635	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
FOC13_20650	COG0457	Tetratricopeptide repeat
FOC13_20655	COG1609	Transcriptional regulator
FOC13_20665	COG0561	phosphatase activity
FOC13_20670	COG0673	inositol 2-dehydrogenase activity
FOC13_20675	COG0738	Major facilitator superfamily
FOC13_20695	COG1619	proteins homologs of microcin C7 resistance protein MccF
FOC13_20705	COG0583	DNA-binding transcription factor activity
FOC13_20715	COG1139	Iron-sulfur cluster binding protein
FOC13_20720	COG1556	Lactate utilization protein
FOC13_20725	COG2271	Major facilitator Superfamily
FOC13_20730	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC13_20735	COG2808	Putative FMN-binding domain
FOC13_20745	COG1846	Transcriptional regulator
FOC13_20750	COG2364	Membrane
FOC13_20760	COG5002	protein histidine kinase activity
FOC13_20760	COG3850	Histidine kinase
FOC13_20775	COG0577	efflux transmembrane transporter activity
FOC13_20780	COG1136	(ABC) transporter
FOC13_20795	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
FOC13_20800	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FOC13_20810	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FOC13_20815	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC13_20830	COG1476	TRANSCRIPTIONal
FOC13_20850	COG2515	1-aminocyclopropane-1-carboxylate deaminase
FOC13_20875	COG3850	Histidine kinase
FOC13_20875	COG5002	protein histidine kinase activity
FOC13_20880	COG0745	RESPONSE REGULATOR receiver
FOC13_20905	COG2814	Major facilitator Superfamily
FOC13_20945	COG2169	Transcriptional regulator
FOC13_20970	COG0346	lactoylglutathione lyase activity
FOC13_20985	COG1522	sequence-specific DNA binding
FOC13_21000	COG0443	Heat shock 70 kDa protein
FOC13_21015	COG0640	Transcriptional regulator
FOC13_21020	COG0346	lactoylglutathione lyase activity
FOC13_21025	COG0798	PFAM Bile acid sodium symporter
FOC13_21055	COG1121	(ABC) transporter
FOC13_21060	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FOC13_21065	COG0803	Belongs to the bacterial solute-binding protein 9 family
FOC13_21070	COG2267	carboxylic ester hydrolase activity
FOC13_21075	COG1575	Belongs to the MenA family. Type 1 subfamily
FOC13_21090	COG5609	conserved protein (DUF2294)
FOC13_21095	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
FOC13_21105	COG0288	reversible hydration of carbon dioxide
FOC13_21110	COG0415	Belongs to the DNA photolyase family
FOC13_21150	COG1846	Transcriptional regulator
FOC13_21155	COG0583	DNA-binding transcription factor activity
FOC13_21175	COG1335	isochorismatase
FOC13_21180	COG2267	carboxylic ester hydrolase activity
FOC13_21185	COG0753	catalase activity
FOC13_21190	COG0737	Belongs to the 5'-nucleotidase family
FOC13_21225	COG2066	Belongs to the glutaminase family
FOC13_21235	COG0784	Response regulator, receiver
FOC13_21260	COG0281	malic enzyme
FOC13_21270	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
FOC13_21275	COG1114	Component of the transport system for branched-chain amino acids
FOC13_21280	COG0531	amino acid
FOC13_21285	COG0322	excinuclease ABC activity
FOC13_21295	COG1396	sequence-specific DNA binding
FOC13_21300	COG0252	asparaginase activity
FOC13_21305	COG1027	Aspartate ammonia-lyase
FOC13_21320	COG1063	alcohol dehydrogenase
FOC13_21350	COG1280	lysine exporter protein (LysE YggA)
FOC13_21355	COG3403	YqcI/YcgG family
FOC13_21360	COG5577	PFAM Coat F domain
FOC13_21375	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC13_21380	COG0574	Belongs to the PEP-utilizing enzyme family
FOC13_21380	COG3848	Pyruvate phosphate dikinase
FOC13_21395	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
FOC13_21425	COG1960	acyl-CoA dehydrogenase activity
FOC13_21435	COG0640	Transcriptional regulator
FOC13_21440	COG0860	N-Acetylmuramoyl-L-alanine amidase
FOC13_21455	COG1414	Transcriptional regulator
FOC13_21460	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
FOC13_21465	COG1984	allophanate hydrolase subunit 2
FOC13_21495	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
FOC13_21540	COG4335	DNA alkylation repair
FOC13_21550	COG0833	amino acid
FOC13_21560	COG0730	response to heat
FOC13_21590	COG0596	Alpha beta hydrolase
FOC13_21595	COG0745	RESPONSE REGULATOR receiver
FOC13_21600	COG0642	Histidine kinase
FOC13_21620	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC13_21640	COG0456	acetyltransferase
FOC13_21645	COG2207	Transcriptional regulator
FOC13_21670	COG1136	(ABC) transporter
FOC13_21670	COG0577	efflux transmembrane transporter activity
FOC13_21680	COG1725	Transcriptional regulator
FOC13_21715	COG1846	Transcriptional regulator
FOC13_21720	COG0778	Nitroreductase
FOC13_21730	COG0714	Associated with various cellular activities
FOC13_21755	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
FOC13_21765	COG0753	catalase activity
FOC13_21770	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FOC13_21780	COG0463	Glycosyl transferase, family 2
FOC13_21805	COG0463	Glycosyl transferase, family 2
FOC13_21830	COG0714	Associated with various cellular activities
FOC13_21850	COG0346	lactoylglutathione lyase activity
FOC13_21855	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC13_21865	COG3279	Response regulator of the LytR AlgR family
FOC13_21875	COG4377	Putative membrane peptidase family (DUF2324)
FOC13_21890	COG3655	Transcriptional regulator
FOC13_21900	COG1785	Belongs to the alkaline phosphatase family
FOC13_21905	COG3239	Fatty acid desaturase
FOC13_21910	COG1690	Belongs to the RtcB family
FOC13_21915	COG0833	amino acid
FOC13_21920	COG1414	Transcriptional regulator
FOC13_21925	COG4187	Peptidase family M20/M25/M40
FOC13_21930	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
FOC13_21935	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
FOC13_21945	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FOC13_21965	COG2329	Antibiotic biosynthesis monooxygenase
FOC13_22000	COG2390	Transcriptional regulator
FOC13_22010	COG1172	Belongs to the binding-protein-dependent transport system permease family
FOC13_22020	COG1879	ABC-type sugar transport system periplasmic component
FOC13_22045	COG1595	DNA-templated transcription, initiation
FOC13_22055	COG3584	3D domain protein
FOC13_22055	COG1388	LysM domain
FOC13_22090	COG1605	Chorismate mutase
FOC13_22090	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
FOC13_22095	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
FOC13_22100	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
FOC13_22105	COG0287	Prephenate dehydrogenase
FOC13_22120	COG1309	transcriptional regulator
FOC13_22125	COG2409	Drug exporters of the RND superfamily
FOC13_22125	COG1033	growth of symbiont in host cell
FOC13_22130	COG1033	growth of symbiont in host cell
FOC13_22130	COG2409	Drug exporters of the RND superfamily
FOC13_22135	COG1033	growth of symbiont in host cell
FOC13_22135	COG2409	Drug exporters of the RND superfamily
FOC13_22145	COG0488	(ABC) transporter
FOC13_22150	COG1368	sulfuric ester hydrolase activity
FOC13_22155	COG0861	Integral membrane protein TerC family
FOC13_22165	COG0726	polysaccharide deacetylase
FOC13_22175	COG4912	Dna alkylation repair
FOC13_22195	COG2318	DinB family
FOC13_22200	COG0697	spore germination
FOC13_22225	COG2746	aminoglycoside 3-N-acetyltransferase activity
FOC13_22265	COG1116	anion transmembrane transporter activity
FOC13_22270	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FOC13_22275	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC13_22280	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FOC13_22290	COG0628	permease
FOC13_22350	COG5146	pantothenate kinase activity
FOC13_22355	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
FOC13_22360	COG0436	Aminotransferase
FOC13_22395	COG2226	methyltransferase
FOC13_22410	COG2261	transglycosylase associated protein
FOC13_22430	COG2814	Major facilitator Superfamily
FOC13_22430	COG0477	Major facilitator Superfamily
FOC13_22435	COG4533	DNA binding
FOC13_22440	COG0789	Transcriptional regulator
FOC13_22445	COG1664	Polymer-forming cytoskeletal
FOC13_22455	COG2814	Major facilitator Superfamily
FOC13_22475	COG1307	EDD domain protein, DegV family
FOC13_22490	COG1164	Oligoendopeptidase f
FOC13_22530	COG5002	protein histidine kinase activity
FOC13_22535	COG2936	dipeptidyl-peptidase activity
FOC13_22580	COG4948	Mandelate Racemase Muconate Lactonizing
FOC13_22590	COG4166	transmembrane transport
FOC13_22595	COG0519	Catalyzes the synthesis of GMP from XMP
FOC13_22600	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
FOC13_22615	COG0586	Pfam SNARE associated Golgi protein
FOC13_22655	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC13_22660	COG3938	Belongs to the proline racemase family
FOC13_22670	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FOC13_22675	COG1012	belongs to the aldehyde dehydrogenase family
FOC13_22680	COG1115	amino acid carrier protein
FOC13_22685	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FOC13_22700	COG3397	chitin binding
FOC13_22725	COG4637	Psort location Cytoplasmic, score
FOC13_22745	COG0514	ATP-dependent DNA helicase (RecQ)
FOC13_22750	COG2105	PFAM AIG2 family protein
FOC13_22765	COG3973	AAA domain
FOC13_22815	COG2333	competence protein COMEC
FOC13_22815	COG0658	competence protein
FOC13_22835	COG2205	protein histidine kinase activity
FOC13_22850	COG3397	chitin binding
FOC13_22855	COG2153	protein acetylation
FOC13_22860	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
FOC13_22875	COG0740	serine-type endopeptidase activity
FOC13_22885	COG4175	Glycine betaine
FOC13_22885	COG0517	IMP dehydrogenase activity
FOC13_22890	COG4176	ABC-type proline glycine betaine transport system permease component
FOC13_22920	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
FOC13_22920	COG0456	acetyltransferase
FOC13_22925	COG1028	Short-chain dehydrogenase reductase Sdr
FOC13_22935	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
FOC13_22940	COG0022	dehydrogenase e1 component
FOC13_22945	COG0508	dehydrogenase complex catalyzes the overall conversion of
FOC13_22950	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FOC13_22965	COG1959	2 iron, 2 sulfur cluster binding
FOC13_22985	COG1349	DNA-binding transcription factor activity
FOC13_23000	COG3284	Transcriptional regulator
FOC13_23030	COG1309	transcriptional regulator
FOC13_23035	COG3844	kynureninase activity
FOC13_23040	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
FOC13_23045	COG3483	tryptophan 2,3-dioxygenase activity
FOC13_23060	COG3409	Peptidoglycan-binding domain 1 protein
FOC13_23060	COG3773	Cell wall hydrolase
FOC13_23065	COG2959	enzyme of heme biosynthesis
FOC13_23080	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC13_23085	COG4129	membrane
FOC13_23115	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC13_23120	COG0697	spore germination
FOC13_23130	COG0201	protein transport
FOC13_23150	COG3227	Zinc metalloprotease (Elastase)
FOC13_23155	COG1523	belongs to the glycosyl hydrolase 13 family
FOC13_23170	COG0076	glutamate decarboxylase activity
FOC13_23190	COG1011	Hydrolase
FOC13_23215	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC13_23255	COG0322	excinuclease ABC activity
FOC13_23270	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FOC13_23320	COG3878	Protein conserved in bacteria
FOC13_23355	COG1051	belongs to the nudix hydrolase family
FOC13_23360	COG0592	DNA-directed DNA polymerase activity
FOC13_23365	COG2816	NAD+ diphosphatase activity
FOC13_23380	COG2223	nitrite transmembrane transporter activity
FOC13_23410	COG0697	spore germination
FOC13_23430	COG0584	glycerophosphoryl diester phosphodiesterase
FOC13_23445	COG2814	Major facilitator Superfamily
FOC13_23475	COG0693	protein deglycase activity
FOC13_23510	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FOC13_23525	COG0604	alcohol dehydrogenase
FOC13_23540	COG2205	protein histidine kinase activity
FOC13_23555	COG1122	ATPase activity
FOC13_23565	COG1794	racemase activity, acting on amino acids and derivatives
FOC13_23570	COG1819	glycosyl
FOC13_23580	COG5002	protein histidine kinase activity
FOC13_23590	COG0561	phosphatase activity
FOC13_23625	COG2124	cytochrome p450
FOC13_23690	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
FOC13_23700	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC13_23705	COG0460	homoserine dehydrogenase
FOC13_23730	COG1136	(ABC) transporter
FOC13_23760	COG0745	RESPONSE REGULATOR receiver
FOC13_23770	COG3773	Cell wall hydrolase
FOC13_23795	COG1063	alcohol dehydrogenase
FOC13_23810	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC13_23830	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
FOC13_23845	COG2814	Major facilitator Superfamily
FOC13_23855	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FOC13_23870	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
FOC13_23870	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
FOC13_23910	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FOC13_23935	COG1686	Belongs to the peptidase S11 family
FOC13_23940	COG2318	DinB family
FOC13_23950	COG0572	uridine kinase
FOC13_23955	COG1247	-acetyltransferase
FOC13_23965	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FOC13_23970	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
FOC13_23975	COG1024	Enoyl-CoA hydratase
FOC13_23980	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FOC13_23985	COG0511	ligase activity, forming carbon-carbon bonds
FOC13_23990	COG0439	Biotin carboxylase
FOC13_23995	COG1960	acyl-CoA dehydrogenase activity
FOC13_24010	COG1309	transcriptional regulator
FOC13_24020	COG1131	(ABC) transporter
FOC13_24035	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FOC13_24040	COG1252	NADH dehydrogenase
FOC13_24055	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC13_24075	COG1309	transcriptional regulator
FOC13_24095	COG1876	peptidase activity
FOC13_24110	COG1476	TRANSCRIPTIONal
FOC13_24115	COG0457	Tetratricopeptide repeat
FOC13_24140	COG3718	enzyme involved in inositol metabolism
FOC13_24160	COG1012	belongs to the aldehyde dehydrogenase family
FOC13_24170	COG0673	inositol 2-dehydrogenase activity
FOC13_24175	COG2814	Major facilitator Superfamily
FOC13_24180	COG1609	Transcriptional regulator
FOC13_24185	COG0671	phosphoesterase, PA-phosphatase related
FOC13_24190	COG2367	Beta-lactamase
FOC13_24200	COG0768	penicillin binding
FOC13_24210	COG1595	DNA-templated transcription, initiation
FOC13_24225	COG2195	Cleaves the N-terminal amino acid of tripeptides
FOC13_24255	COG1846	Transcriptional regulator
FOC13_24260	COG3961	Belongs to the TPP enzyme family
FOC13_24265	COG2226	methyltransferase
FOC13_24275	COG3615	Tellurite resistance protein tehB
FOC13_24275	COG0500	methyltransferase
FOC13_24280	COG1136	(ABC) transporter
FOC13_24280	COG0577	efflux transmembrane transporter activity
FOC13_24295	COG1309	transcriptional regulator
FOC13_24325	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC13_24345	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
FOC13_24350	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
FOC13_24355	COG2971	BadF BadG BcrA BcrD
FOC13_24405	COG1595	DNA-templated transcription, initiation
FOC13_24435	COG1396	sequence-specific DNA binding
FOC13_24455	COG1132	(ABC) transporter
FOC13_24460	COG1132	(ABC) transporter
FOC13_24475	COG2258	MOSC domain
FOC13_24480	COG0583	DNA-binding transcription factor activity
FOC13_24495	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FOC13_24500	COG0583	DNA-binding transcription factor activity
FOC13_24535	COG0561	phosphatase activity
FOC13_24540	COG0010	Belongs to the arginase family
FOC13_24555	COG1278	Cold shock
FOC13_24565	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC13_24605	COG1247	-acetyltransferase
FOC13_24640	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC13_24685	COG2226	methyltransferase
FOC13_24705	COG2814	Major facilitator Superfamily
FOC13_24710	COG0596	Alpha beta hydrolase
FOC13_24725	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
FOC13_24730	COG1187	pseudouridine synthase activity
FOC13_24735	COG2329	Antibiotic biosynthesis monooxygenase
FOC13_24750	COG1115	amino acid carrier protein
FOC13_24760	COG2318	DinB family
FOC13_24770	COG0776	regulation of translation
FOC13_24785	COG2814	Major facilitator Superfamily
FOC13_24790	COG3251	PFAM MbtH domain protein
FOC13_24795	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FOC13_24800	COG3433	isochorismatase activity
FOC13_24800	COG1535	isochorismatase
FOC13_24805	COG1021	2,3-dihydroxybenzoate-AMP ligase
FOC13_24810	COG1169	isochorismate synthase
FOC13_24815	COG1028	Short-chain dehydrogenase reductase Sdr
FOC13_24820	COG2223	nitrite transmembrane transporter activity
FOC13_24840	COG0419	ATPase involved in DNA repair
FOC13_24845	COG0420	3'-5' exonuclease activity
FOC13_24860	COG1024	Enoyl-CoA hydratase
FOC13_24865	COG1280	lysine exporter protein (LysE YggA)
FOC13_24870	COG1012	belongs to the aldehyde dehydrogenase family
FOC13_24875	COG2084	Dehydrogenase
FOC13_24880	COG1960	acyl-CoA dehydrogenase activity
FOC13_24885	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
FOC13_24890	COG2079	MmgE PrpD family protein
FOC13_24895	COG0372	Belongs to the citrate synthase family
FOC13_24900	COG4841	protein insertion into membrane
FOC13_24905	COG2814	Major facilitator Superfamily
FOC13_24910	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FOC13_24910	COG4499	WXG100 protein secretion system (Wss), protein YukC
FOC13_24950	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FOC13_25040	COG1715	Restriction endonuclease
FOC13_25040	COG1787	Restriction endonuclease
FOC13_25070	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC13_25075	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
FOC13_25080	COG0671	phosphoesterase, PA-phosphatase related
FOC13_25085	COG4326	sporulation control protein
FOC13_25125	COG1509	lysine 2,3-aminomutase activity
FOC13_25130	COG3829	transcription factor binding
FOC13_25135	COG0456	acetyltransferase
FOC13_25140	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FOC13_25145	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
FOC13_25150	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
FOC13_25155	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FOC13_25170	COG5506	Protein of unknown function (DUF1694)
FOC13_25175	COG1012	belongs to the aldehyde dehydrogenase family
FOC13_25180	COG1253	flavin adenine dinucleotide binding
FOC13_25215	COG1174	glycine betaine transport
FOC13_25220	COG0517	IMP dehydrogenase activity
FOC13_25220	COG1125	glycine betaine transport
FOC13_25250	COG1070	Carbohydrate kinase
FOC13_25275	COG1064	alcohol dehydrogenase
FOC13_25285	COG2197	response regulator
FOC13_25290	COG2203	Gaf domain
FOC13_25290	COG4585	Histidine kinase
FOC13_25295	COG0668	transmembrane transport
FOC13_25305	COG1051	belongs to the nudix hydrolase family
FOC13_25330	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FOC13_25335	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FOC13_25350	COG0367	asparagine synthase
FOC13_25355	COG0071	Belongs to the small heat shock protein (HSP20) family
FOC13_25360	COG1999	signal sequence binding
FOC13_25365	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
FOC13_25370	COG1307	EDD domain protein, DegV family
FOC13_25380	COG0805	protein transport
FOC13_25390	COG1272	protein, Hemolysin III
FOC13_25400	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
FOC13_25405	COG0768	penicillin binding
FOC13_25420	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FOC13_25440	COG0546	phosphoglycolate phosphatase activity
FOC13_25455	COG1131	(ABC) transporter
FOC13_25470	COG0456	acetyltransferase
FOC13_25480	COG1794	racemase activity, acting on amino acids and derivatives
FOC13_25485	COG1454	alcohol dehydrogenase
FOC13_25490	COG2610	gluconate transmembrane transporter activity
FOC13_25515	COG0733	neurotransmitter:sodium symporter activity
FOC13_25530	COG3850	Histidine kinase
FOC13_25530	COG5002	protein histidine kinase activity
FOC13_25535	COG0745	RESPONSE REGULATOR receiver
FOC13_25540	COG0471	metal ion transport
FOC13_25545	COG1929	Belongs to the glycerate kinase type-1 family
FOC13_25615	COG1674	ftsk spoiiie
FOC13_25635	COG0017	Asparaginyl-tRNA synthetase
FOC13_25655	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
FOC13_25680	COG0018	arginyl-trna synthetase
FOC13_25685	COG2136	Putative SAM-dependent methyltransferase
FOC13_25685	COG2521	methyltransferase
FOC13_25700	COG1413	lyase activity
FOC13_25715	COG0629	single-stranded DNA binding
FOC13_25730	COG0488	(ABC) transporter
FOC13_25735	COG1418	mRNA catabolic process
FOC13_25750	COG5632	N-Acetylmuramoyl-L-alanine amidase
FOC13_25765	COG2359	stage V sporulation protein S
FOC13_25800	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
FOC13_25805	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FOC13_25810	COG2146	nitrite reductase [NAD(P)H] activity
FOC13_25815	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
FOC13_25815	COG1587	Uroporphyrinogen-III synthase
FOC13_25825	COG1648	precorrin-2 dehydrogenase activity
FOC13_25840	COG2223	nitrite transmembrane transporter activity
FOC13_25850	COG0314	molybdopterin synthase activity
FOC13_25855	COG0303	'Molybdopterin
FOC13_25860	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FOC13_25865	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
FOC13_25870	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FOC13_25890	COG2181	nitrate reductase activity
FOC13_25895	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
FOC13_25900	COG1140	nitrate reductase beta subunit
FOC13_25905	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
FOC13_25920	COG0714	Associated with various cellular activities
FOC13_25925	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
FOC13_25930	COG1305	Transglutaminase-like
FOC13_25935	COG0386	Belongs to the glutathione peroxidase family
FOC13_25960	COG1595	DNA-templated transcription, initiation
FOC13_25965	COG0604	alcohol dehydrogenase
FOC13_25975	COG0346	lactoylglutathione lyase activity
FOC13_26000	COG2226	methyltransferase
FOC13_26025	COG3874	Sporulation protein YtfJ
FOC13_26075	COG0456	acetyltransferase
FOC13_26100	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC13_26105	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC13_26110	COG1819	glycosyl
FOC13_26130	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FOC13_26140	COG0561	phosphatase activity
FOC13_26160	COG2211	Major facilitator Superfamily
FOC13_26165	COG0154	amidase activity
FOC13_26175	COG1876	peptidase activity
FOC13_26185	COG0860	N-Acetylmuramoyl-L-alanine amidase
FOC13_26205	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOC13_26210	COG1114	Component of the transport system for branched-chain amino acids
FOC13_26225	COG1253	flavin adenine dinucleotide binding
FOC13_26230	COG2839	Protein conserved in bacteria
FOC13_26235	COG0702	epimerase
FOC13_26250	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FOC13_26260	COG1607	acyl-coa hydrolase
FOC13_26265	COG3689	TIGRFAM TIGR03943 family protein
FOC13_26270	COG0701	Predicted permease
FOC13_26280	COG2244	polysaccharide biosynthetic process
FOC13_26285	COG0586	Pfam SNARE associated Golgi protein
FOC13_26290	COG1051	belongs to the nudix hydrolase family
FOC13_26295	COG5337	Spore coat protein CotH
FOC13_26305	COG0406	alpha-ribazole phosphatase activity
FOC13_26320	COG4166	transmembrane transport
FOC13_26330	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FOC13_26340	COG0702	epimerase
FOC13_26345	COG3443	Belongs to the bacterial solute-binding protein 9 family
FOC13_26345	COG0803	Belongs to the bacterial solute-binding protein 9 family
FOC13_26395	COG0456	acetyltransferase
FOC13_26400	COG0523	cobalamin synthesis protein
FOC13_26405	COG4989	oxidoreductase activity
FOC13_26415	COG1231	oxidoreductase activity
FOC13_26425	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FOC13_26440	COG0783	Belongs to the Dps family
FOC13_26445	COG3949	Membrane
FOC13_26460	COG0840	transmembrane signaling receptor activity
FOC13_26485	COG2814	Major facilitator Superfamily
FOC13_26490	COG0667	Aldo Keto reductase
FOC13_26495	COG0640	Transcriptional regulator
FOC13_26500	COG1404	Belongs to the peptidase S8 family
FOC13_26505	COG2002	toxin-antitoxin pair type II binding
FOC13_26545	COG1752	Esterase of the alpha-beta hydrolase superfamily
FOC13_26555	COG1279	arginine transmembrane transporter activity
FOC13_26570	COG1082	Xylose isomerase domain protein TIM barrel
FOC13_26585	COG0318	PFAM AMP-dependent synthetase and ligase
FOC13_26590	COG4264	IucA IucC family
FOC13_26600	COG1247	-acetyltransferase
FOC13_26605	COG1285	pathogenesis
FOC13_26615	COG0726	polysaccharide deacetylase
FOC13_26620	COG5002	protein histidine kinase activity
FOC13_26625	COG0745	RESPONSE REGULATOR receiver
FOC13_26635	COG1316	TRANSCRIPTIONal
FOC13_26660	COG0460	homoserine dehydrogenase
FOC13_26680	COG0726	polysaccharide deacetylase
FOC13_26695	COG0300	oxidoreductase activity
FOC13_26705	COG5002	protein histidine kinase activity
FOC13_26710	COG0745	RESPONSE REGULATOR receiver
FOC13_26725	COG1388	LysM domain
FOC13_26725	COG0791	NLP P60 protein
FOC13_26740	COG1686	Belongs to the peptidase S11 family
FOC13_26760	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
FOC13_26765	COG4988	ABC transporter
FOC13_26770	COG1294	oxidase, subunit
FOC13_26775	COG1271	oxidase subunit
FOC13_26785	COG1846	Transcriptional regulator
FOC13_26805	COG0583	DNA-binding transcription factor activity
FOC13_26825	COG0411	ABC transporter
FOC13_26835	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FOC13_26840	COG2030	dehydratase
FOC13_26845	COG0318	PFAM AMP-dependent synthetase and ligase
FOC13_26860	COG0523	cobalamin synthesis protein
FOC13_26865	COG1231	oxidoreductase activity
FOC13_26870	COG0039	L-malate dehydrogenase activity
FOC13_26875	COG0628	permease
FOC13_26885	COG0778	Nitroreductase
FOC13_26890	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
FOC13_26895	COG1959	2 iron, 2 sulfur cluster binding
FOC13_26900	COG0583	DNA-binding transcription factor activity
FOC13_26905	COG0697	spore germination
FOC13_26915	COG4549	nuclear export factor GLE1
FOC13_26920	COG1276	copper resistance
FOC13_26920	COG2372	response to copper ion
FOC13_26935	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
FOC13_26965	COG2132	Multicopper oxidase
FOC13_26970	COG0006	proline dipeptidase activity
FOC13_26990	COG4224	UPF0291 protein
FOC13_27005	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
FOC13_27010	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FOC13_27020	COG2390	Transcriptional regulator
FOC13_27050	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
FOC13_27065	COG1914	H( )-stimulated, divalent metal cation uptake system
FOC13_27100	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)