locus-tag class description C3496_00010 PF01545 Cation efflux family C3496_00010 PF16916 Dimerisation domain of Zinc Transporter C3496_00015 PF02355 Protein export membrane protein C3496_00015 PF07549 SecD/SecF GG Motif C3496_00020 PF13797 Post-transcriptional regulator C3496_00025 PF14667 Polysaccharide biosynthesis C-terminal domain C3496_00025 PF01943 Polysaccharide biosynthesis protein C3496_00030 PF04239 Protein of unknown function (DUF421) C3496_00040 PF02699 Preprotein translocase subunit C3496_00045 PF01702 Queuine tRNA-ribosyltransferase C3496_00050 PF02547 Queuosine biosynthesis protein C3496_00055 PF11146 Protein of unknown function (DUF2905) C3496_00060 PF05496 Holliday junction DNA helicase RuvB P-loop domain C3496_00060 PF05491 RuvB C-terminal winged helix domain C3496_00060 PF17864 RuvB AAA lid domain C3496_00065 PF01330 RuvA N terminal domain C3496_00065 PF07499 RuvA, C-terminal domain C3496_00070 PF01497 Periplasmic binding protein C3496_00080 PF00892 EamA-like transporter family C3496_00085 PF01022 Bacterial regulatory protein, arsR family C3496_00100 PF01476 LysM domain C3496_00105 PF02445 Quinolinate synthetase A protein C3496_00110 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain C3496_00110 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain C3496_00115 PF02910 Fumarate reductase flavoprotein C-term C3496_00115 PF00890 FAD binding domain C3496_00120 PF00266 Aminotransferase class-V C3496_00125 PF08279 HTH domain C3496_00125 PF02829 3H domain C3496_00130 PF03475 3-alpha domain C3496_00130 PF03473 MOSC domain C3496_00135 PF01842 ACT domain C3496_00135 PF00800 Prephenate dehydratase C3496_00140 PF02687 FtsX-like permease family C3496_00145 PF02687 FtsX-like permease family C3496_00150 PF00005 ABC transporter C3496_00155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_00160 PF00072 Response regulator receiver domain C3496_00160 PF00486 Transcriptional regulatory protein, C terminal C3496_00165 PF01018 GTP1/OBG C3496_00165 PF09269 Domain of unknown function (DUF1967) C3496_00165 PF01926 50S ribosome-binding GTPase C3496_00170 PF14682 Sporulation initiation phospho-transferase B, C-terminal C3496_00170 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain C3496_00175 PF01016 Ribosomal L27 protein C3496_00180 PF04327 Cysteine protease Prp C3496_00185 PF00829 Ribosomal prokaryotic L21 protein C3496_00190 PF00575 S1 RNA binding domain C3496_00190 PF10150 Ribonuclease E/G family C3496_00195 PF02163 Peptidase family M50 C3496_00200 PF01551 Peptidase family M23 C3496_00205 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C3496_00210 PF03775 Septum formation inhibitor MinC, C-terminal domain C3496_00220 PF04085 rod shape-determining protein MreC C3496_00230 PF04002 RadC-like JAB domain C3496_00235 PF02545 Maf-like protein C3496_00250 PF02875 Mur ligase family, glutamate ligase domain C3496_00250 PF08245 Mur ligase middle domain C3496_00255 PF00133 tRNA synthetases class I (I, L, M and V) C3496_00255 PF08264 Anticodon-binding domain of tRNA C3496_00255 PF10458 Valyl tRNA synthetase tRNA binding arm C3496_00265 PF01476 LysM domain C3496_00270 PF00202 Aminotransferase class-III C3496_00275 PF00490 Delta-aminolevulinic acid dehydratase C3496_00280 PF02602 Uroporphyrinogen-III synthase HemD C3496_00285 PF03900 Porphobilinogen deaminase, C-terminal domain C3496_00285 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain C3496_00290 PF01578 Cytochrome C assembly protein C3496_00295 PF01488 Shikimate / quinate 5-dehydrogenase C3496_00295 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain C3496_00295 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain C3496_00300 PF01047 MarR family C3496_00305 PF02566 OsmC-like protein C3496_00310 PF01926 50S ribosome-binding GTPase C3496_00315 PF05362 Lon protease (S16) C-terminal proteolytic domain C3496_00315 PF00004 ATPase family associated with various cellular activities (AAA) C3496_00315 PF02190 ATP-dependent protease La (LON) substrate-binding domain C3496_00320 PF00004 ATPase family associated with various cellular activities (AAA) C3496_00320 PF05362 Lon protease (S16) C-terminal proteolytic domain C3496_00325 PF07724 AAA domain (Cdc48 subfamily) C3496_00325 PF10431 C-terminal, D2-small domain, of ClpB protein C3496_00325 PF06689 ClpX C4-type zinc finger C3496_00330 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C3496_00330 PF05698 Bacterial trigger factor protein (TF) C-terminus C3496_00330 PF05697 Bacterial trigger factor protein (TF) C3496_00350 PF11724 YvbH-like oligomerisation region C3496_00350 PF08000 Bacterial PH domain C3496_00370 PF12850 Calcineurin-like phosphoesterase superfamily domain C3496_00375 PF01725 Ham1 family C3496_00380 PF03725 3' exoribonuclease family, domain 2 C3496_00380 PF01138 3' exoribonuclease family, domain 1 C3496_00385 PF10646 Sporulation and spore germination C3496_00390 PF01177 Asp/Glu/Hydantoin racemase C3496_00395 PF07690 Major Facilitator Superfamily C3496_00405 PF00440 Bacterial regulatory proteins, tetR family C3496_00410 PF01965 DJ-1/PfpI family C3496_00420 PF00196 Bacterial regulatory proteins, luxR family C3496_00440 PF02374 Anion-transporting ATPase C3496_00445 PF06953 Arsenical resistance operon trans-acting repressor ArsD C3496_00450 PF01451 Low molecular weight phosphotyrosine protein phosphatase C3496_00455 PF01022 Bacterial regulatory protein, arsR family C3496_00465 PF01758 Sodium Bile acid symporter family C3496_00480 PF01297 Zinc-uptake complex component A periplasmic C3496_00485 PF00950 ABC 3 transport family C3496_00490 PF00005 ABC transporter C3496_00495 PF01022 Bacterial regulatory protein, arsR family C3496_00500 PF00403 Heavy-metal-associated domain C3496_00505 PF02630 SCO1/SenC C3496_00510 PF13462 Thioredoxin C3496_00515 PF02600 Disulfide bond formation protein DsbB C3496_00545 PF10141 Single-strand DNA-specific exonuclease, C terminal domain C3496_00545 PF17768 RecJ OB domain C3496_00545 PF02272 DHHA1 domain C3496_00545 PF01368 DHH family C3496_00560 PF00196 Bacterial regulatory proteins, luxR family C3496_00565 PF00860 Permease family C3496_00570 PF07969 Amidohydrolase family C3496_00580 PF01381 Helix-turn-helix C3496_00580 PF07883 Cupin domain C3496_00585 PF13536 Putative multidrug resistance efflux transporter C3496_00590 PF00230 Major intrinsic protein C3496_00595 PF02082 Transcriptional regulator C3496_00605 PF13732 Domain of unknown function (DUF4162) C3496_00605 PF00005 ABC transporter C3496_00610 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) C3496_00615 PF00691 OmpA family C3496_00615 PF13677 Membrane MotB of proton-channel complex MotA/MotB C3496_00620 PF01618 MotA/TolQ/ExbB proton channel family C3496_00625 PF02557 D-alanyl-D-alanine carboxypeptidase C3496_00630 PF03061 Thioesterase superfamily C3496_00635 PF13183 4Fe-4S dicluster domain C3496_00635 PF13085 2Fe-2S iron-sulfur cluster binding domain C3496_00640 PF00890 FAD binding domain C3496_00640 PF02910 Fumarate reductase flavoprotein C-term C3496_00645 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C3496_00650 PF10702 Protein of unknown function (DUF2507) C3496_00655 PF01541 GIY-YIG catalytic domain C3496_00655 PF02151 UvrB/uvrC motif C3496_00655 PF08459 UvrC Helix-hairpin-helix N-terminal C3496_00660 PF00085 Thioredoxin C3496_00665 PF01012 Electron transfer flavoprotein domain C3496_00665 PF00766 Electron transfer flavoprotein FAD-binding domain C3496_00670 PF01012 Electron transfer flavoprotein domain C3496_00675 PF00378 Enoyl-CoA hydratase/isomerase C3496_00680 PF08359 YsiA-like protein, C-terminal region C3496_00680 PF00440 Bacterial regulatory proteins, tetR family C3496_00685 PF13193 AMP-binding enzyme C-terminal domain C3496_00685 PF00501 AMP-binding enzyme C3496_00695 PF05163 DinB family C3496_00720 PF00005 ABC transporter C3496_00725 PF00512 His Kinase A (phospho-acceptor) domain C3496_00725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_00730 PF00072 Response regulator receiver domain C3496_00730 PF00486 Transcriptional regulatory protein, C terminal C3496_00740 PF09962 Uncharacterized conserved protein (DUF2196) C3496_00745 PF10672 S-adenosylmethionine-dependent methyltransferase C3496_00745 PF17785 PUA-like domain C3496_00755 PF03992 Antibiotic biosynthesis monooxygenase C3496_00760 PF04203 Sortase domain C3496_00765 PF00005 ABC transporter C3496_00770 PF01032 FecCD transport family C3496_00775 PF01497 Periplasmic binding protein C3496_00780 PF05031 Iron Transport-associated domain C3496_00785 PF05031 Iron Transport-associated domain C3496_00790 PF05525 Branched-chain amino acid transport protein C3496_00795 PF00849 RNA pseudouridylate synthase C3496_00795 PF01479 S4 domain C3496_00805 PF00488 MutS domain V C3496_00805 PF01713 Smr domain C3496_00810 PF14791 DNA polymerase beta thumb C3496_00810 PF14716 Helix-hairpin-helix domain C3496_00810 PF02811 PHP domain C3496_00815 PF02674 Colicin V production protein C3496_00820 PF05164 Cell division protein ZapA C3496_00825 PF11858 Domain of unknown function (DUF3378) C3496_00825 PF01351 Ribonuclease HII C3496_00845 PF00152 tRNA synthetases class II (D, K and N) C3496_00845 PF01336 OB-fold nucleic acid binding domain C3496_00855 PF03483 B3/4 domain C3496_00855 PF03484 tRNA synthetase B5 domain C3496_00855 PF03147 Ferredoxin-fold anticodon binding domain C3496_00855 PF01588 Putative tRNA binding domain C3496_00855 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain C3496_00860 PF01409 tRNA synthetases class II core domain (F) C3496_00860 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain C3496_00865 PF08032 RNA 2'-O ribose methyltransferase substrate binding C3496_00865 PF00588 SpoU rRNA Methylase family C3496_00870 PF14098 Small, acid-soluble spore protein I C3496_00875 PF01966 HD domain C3496_00885 PF07690 Major Facilitator Superfamily C3496_00895 PF16859 Tetracyclin repressor-like, C-terminal domain C3496_00895 PF00440 Bacterial regulatory proteins, tetR family C3496_00900 PF05343 M42 glutamyl aminopeptidase C3496_00910 PF00453 Ribosomal protein L20 C3496_00915 PF01632 Ribosomal protein L35 C3496_00920 PF00707 Translation initiation factor IF-3, C-terminal domain C3496_00920 PF05198 Translation initiation factor IF-3, N-terminal domain C3496_00925 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C3496_00925 PF02824 TGS domain C3496_00925 PF03129 Anticodon binding domain C3496_00925 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C3496_00930 PF08812 YtxC-like family C3496_00935 PF07319 Primosomal protein DnaI N-terminus C3496_00935 PF01695 IstB-like ATP binding protein C3496_00940 PF07261 Replication initiation and membrane attachment C3496_00945 PF03477 ATP cone domain C3496_00950 PF02675 S-adenosylmethionine decarboxylase C3496_00960 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C3496_00960 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C3496_00965 PF01121 Dephospho-CoA kinase C3496_00970 PF02659 Putative manganese efflux pump C3496_00975 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain C3496_00975 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain C3496_00975 PF06827 Zinc finger found in FPG and IleRS C3496_00980 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C3496_00980 PF00476 DNA polymerase family A C3496_00980 PF01367 5'-3' exonuclease, C-terminal SAM fold C3496_00985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_00985 PF16736 Single Cache-like C3496_00985 PF00989 PAS fold C3496_00985 PF00512 His Kinase A (phospho-acceptor) domain C3496_00990 PF00486 Transcriptional regulatory protein, C terminal C3496_00990 PF00072 Response regulator receiver domain C3496_01010 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain C3496_01010 PF00056 lactate/malate dehydrogenase, NAD binding domain C3496_01015 PF00180 Isocitrate/isopropylmalate dehydrogenase C3496_01020 PF00285 Citrate synthase, C-terminal domain C3496_01030 PF04284 Protein of unknown function (DUF441) C3496_01035 PF01594 AI-2E family transporter C3496_01040 PF04186 FxsA cytoplasmic membrane protein C3496_01045 PF00224 Pyruvate kinase, barrel domain C3496_01045 PF02887 Pyruvate kinase, alpha/beta domain C3496_01045 PF00391 PEP-utilising enzyme, mobile domain C3496_01050 PF00365 Phosphofructokinase C3496_01055 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit C3496_01060 PF17848 Acetyl-coA carboxylase zinc finger domain C3496_01060 PF01039 Carboxyl transferase domain C3496_01065 PF00392 Bacterial regulatory proteins, gntR family C3496_01070 PF00390 Malic enzyme, N-terminal domain C3496_01070 PF03949 Malic enzyme, NAD binding domain C3496_01075 PF01336 OB-fold nucleic acid binding domain C3496_01075 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C3496_01075 PF14579 Helix-hairpin-helix motif C3496_01075 PF07733 Bacterial DNA polymerase III alpha NTPase domain C3496_01075 PF02811 PHP domain C3496_01080 PF14034 Sporulation protein YtrH C3496_01090 PF01368 DHH family C3496_01090 PF02272 DHHA1 domain C3496_01100 PF14007 YtpI-like protein C3496_01115 PF03061 Thioesterase superfamily C3496_01115 PF00571 CBS domain C3496_01115 PF00392 Bacterial regulatory proteins, gntR family C3496_01115 PF07085 DRTGG domain C3496_01130 PF01321 Creatinase/Prolidase N-terminal domain C3496_01130 PF00557 Metallopeptidase family M24 C3496_01160 PF08281 Sigma-70, region 4 C3496_01160 PF04542 Sigma-70 region 2 C3496_01175 PF07883 Cupin domain C3496_01185 PF01381 Helix-turn-helix C3496_01195 PF05222 Alanine dehydrogenase/PNT, N-terminal domain C3496_01195 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C3496_01205 PF00582 Universal stress protein family C3496_01230 PF14698 Argininosuccinate lyase C-terminal C3496_01230 PF00206 Lyase C3496_01235 PF00764 Arginosuccinate synthase C3496_01260 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 C3496_01260 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) C3496_01265 PF12787 EcsC protein family C3496_01275 PF00871 Acetokinase family C3496_01280 PF02384 N-6 DNA Methylase C3496_01285 PF08534 Redoxin C3496_01290 PF09579 Sporulation protein YtfJ (Spore_YtfJ) C3496_01300 PF01513 ATP-NAD kinase C3496_01305 PF07969 Amidohydrolase family C3496_01315 PF00501 AMP-binding enzyme C3496_01315 PF13193 AMP-binding enzyme C-terminal domain C3496_01320 PF00269 Small, acid-soluble spore proteins, alpha/beta type C3496_01325 PF02568 Thiamine biosynthesis protein (ThiI) C3496_01325 PF02926 THUMP domain C3496_01330 PF00266 Aminotransferase class-V C3496_01335 PF06160 Septation ring formation regulator, EzrA C3496_01340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3496_01340 PF03466 LysR substrate binding domain C3496_01345 PF00892 EamA-like transporter family C3496_01350 PF00440 Bacterial regulatory proteins, tetR family C3496_01355 PF13185 GAF domain C3496_01360 PF01053 Cys/Met metabolism PLP-dependent enzyme C3496_01370 PF01479 S4 domain C3496_01370 PF00163 Ribosomal protein S4/S9 N-terminal domain C3496_01385 PF00579 tRNA synthetases class I (W and Y) C3496_01385 PF01479 S4 domain C3496_01395 PF04542 Sigma-70 region 2 C3496_01395 PF08281 Sigma-70, region 4 C3496_01405 PF13193 AMP-binding enzyme C-terminal domain C3496_01405 PF00501 AMP-binding enzyme C3496_01410 PF00583 Acetyltransferase (GNAT) family C3496_01415 PF00571 CBS domain C3496_01420 PF00850 Histone deacetylase domain C3496_01435 PF00072 Response regulator receiver domain C3496_01435 PF00486 Transcriptional regulatory protein, C terminal C3496_01440 PF00512 His Kinase A (phospho-acceptor) domain C3496_01440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_01440 PF13426 PAS domain C3496_01440 PF00672 HAMP domain C3496_01445 PF12796 Ankyrin repeats (3 copies) C3496_01450 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C3496_01455 PF01741 Large-conductance mechanosensitive channel, MscL C3496_01480 PF00356 Bacterial regulatory proteins, lacI family C3496_01495 PF07537 CamS sex pheromone cAM373 precursor C3496_01500 PF11009 Protein of unknown function (DUF2847) C3496_01510 PF02073 Thermophilic metalloprotease (M29) C3496_01530 PF13302 Acetyltransferase (GNAT) domain C3496_01545 PF08245 Mur ligase middle domain C3496_01545 PF02875 Mur ligase family, glutamate ligase domain C3496_01545 PF01225 Mur ligase family, catalytic domain C3496_01555 PF01580 FtsK/SpoIIIE family C3496_01555 PF09397 Ftsk gamma domain C3496_01555 PF17854 FtsK alpha domain C3496_01570 PF14794 Domain of unknown function (DUF4479) C3496_01570 PF01588 Putative tRNA binding domain C3496_01575 PF07285 Protein of unknown function (DUF1444) C3496_01580 PF00085 Thioredoxin C3496_01585 PF01931 Protein of unknown function DUF84 C3496_01590 PF05343 M42 glutamyl aminopeptidase C3496_01600 PF00753 Metallo-beta-lactamase superfamily C3496_01605 PF02390 Putative methyltransferase C3496_01610 PF14165 YtzH-like protein C3496_01615 PF01636 Phosphotransferase enzyme family C3496_01620 PF17999 Pullulanase N1-terminal domain C3496_01620 PF00128 Alpha amylase, catalytic domain C3496_01620 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C3496_01630 PF02834 LigT like Phosphoesterase C3496_01635 PF01546 Peptidase family M20/M25/M40 C3496_01640 PF08220 DeoR-like helix-turn-helix domain C3496_01645 PF00849 RNA pseudouridylate synthase C3496_01645 PF01479 S4 domain C3496_01650 PF01943 Polysaccharide biosynthesis protein C3496_01650 PF14667 Polysaccharide biosynthesis C-terminal domain C3496_01660 PF07690 Major Facilitator Superfamily C3496_01665 PF01022 Bacterial regulatory protein, arsR family C3496_01670 PF08327 Activator of Hsp90 ATPase homolog 1-like protein C3496_01685 PF10957 Sporulation protein Cse60 C3496_01695 PF02559 CarD-like/TRCF domain C3496_01705 PF06800 Sugar transport protein C3496_01720 PF02391 MoaE protein C3496_01725 PF07282 Putative transposase DNA-binding domain C3496_01725 PF01385 Probable transposase C3496_01725 PF12323 Helix-turn-helix domain C3496_01735 PF03205 Molybdopterin guanine dinucleotide synthesis protein B C3496_01740 PF03453 MoeA N-terminal region (domain I and II) C3496_01740 PF03454 MoeA C-terminal region (domain IV) C3496_01740 PF00994 Probable molybdopterin binding domain C3496_01745 PF01967 MoaC family C3496_01750 PF00899 ThiF family C3496_01755 PF06463 Molybdenum Cofactor Synthesis C C3496_01755 PF04055 Radical SAM superfamily C3496_01775 PF00581 Rhodanese-like domain C3496_01785 PF00561 alpha/beta hydrolase fold C3496_01790 PF03323 Bacillus/Clostridium GerA spore germination protein C3496_01795 PF03845 Spore germination protein C3496_01820 PF09334 tRNA synthetases class I (M) C3496_01820 PF00133 tRNA synthetases class I (I, L, M and V) C3496_01820 PF08264 Anticodon-binding domain of tRNA C3496_01820 PF13603 Leucyl-tRNA synthetase, Domain 2 C3496_01825 PF07690 Major Facilitator Superfamily C3496_01830 PF00999 Sodium/hydrogen exchanger family C3496_01835 PF02080 TrkA-C domain C3496_01840 PF00589 Phage integrase family C3496_01850 PF00005 ABC transporter C3496_01855 PF07786 Protein of unknown function (DUF1624) C3496_01855 PF04235 Protein of unknown function (DUF418) C3496_01870 PF16199 Radical_SAM C-terminal domain C3496_01870 PF04055 Radical SAM superfamily C3496_01875 PF06962 Putative rRNA methylase C3496_01880 PF00005 ABC transporter C3496_01890 PF01177 Asp/Glu/Hydantoin racemase C3496_01910 PF10776 Protein of unknown function (DUF2600) C3496_01915 PF12146 Serine aminopeptidase, S33 C3496_01920 PF00132 Bacterial transferase hexapeptide (six repeats) C3496_01925 PF01569 PAP2 superfamily C3496_01930 PF13439 Glycosyltransferase Family 4 C3496_01930 PF00534 Glycosyl transferases group 1 C3496_01935 PF12804 MobA-like NTP transferase domain C3496_01940 PF00994 Probable molybdopterin binding domain C3496_01955 PF13302 Acetyltransferase (GNAT) domain C3496_01960 PF00438 S-adenosylmethionine synthetase, N-terminal domain C3496_01960 PF02772 S-adenosylmethionine synthetase, central domain C3496_01960 PF02773 S-adenosylmethionine synthetase, C-terminal domain C3496_01970 PF01293 Phosphoenolpyruvate carboxykinase C3496_02005 PF01784 NIF3 (NGG1p interacting factor 3) C3496_02010 PF13426 PAS domain C3496_02010 PF13188 PAS domain C3496_02010 PF00989 PAS fold C3496_02010 PF00512 His Kinase A (phospho-acceptor) domain C3496_02010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_02015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_02015 PF00512 His Kinase A (phospho-acceptor) domain C3496_02015 PF08447 PAS fold C3496_02015 PF00989 PAS fold C3496_02020 PF00561 alpha/beta hydrolase fold C3496_02020 PF08386 TAP-like protein C3496_02050 PF00005 ABC transporter C3496_02055 PF00528 Binding-protein-dependent transport system inner membrane component C3496_02075 PF00293 NUDIX domain C3496_02095 PF02664 S-Ribosylhomocysteinase (LuxS) C3496_02100 PF01809 Putative membrane protein insertion efficiency factor C3496_02105 PF00484 Carbonic anhydrase C3496_02110 PF01654 Cytochrome bd terminal oxidase subunit I C3496_02115 PF02322 Cytochrome bd terminal oxidase subunit II C3496_02120 PF10676 Spore germination protein gerPA/gerPF C3496_02140 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) C3496_02140 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 C3496_02165 PF04012 PspA/IM30 family C3496_02195 PF17910 FeoB cytosolic helical domain C3496_02195 PF02421 Ferrous iron transport protein B C3496_02195 PF07670 Nucleoside recognition C3496_02195 PF07664 Ferrous iron transport protein B C terminus C3496_02205 PF09515 Thiamine transporter protein (Thia_YuaJ) C3496_02210 PF00512 His Kinase A (phospho-acceptor) domain C3496_02210 PF00672 HAMP domain C3496_02210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_02215 PF00486 Transcriptional regulatory protein, C terminal C3496_02215 PF00072 Response regulator receiver domain C3496_02240 PF00156 Phosphoribosyl transferase domain C3496_02245 PF00781 Diacylglycerol kinase catalytic domain C3496_02260 PF02687 FtsX-like permease family C3496_02265 PF00005 ABC transporter C3496_02275 PF00248 Aldo/keto reductase family C3496_02290 PF09335 SNARE associated Golgi protein C3496_02295 PF00398 Ribosomal RNA adenine dimethylase C3496_02300 PF02311 AraC-like ligand binding domain C3496_02300 PF12833 Helix-turn-helix domain C3496_02310 PF02687 FtsX-like permease family C3496_02315 PF00005 ABC transporter C3496_02320 PF06445 GyrI-like small molecule binding domain C3496_02320 PF12833 Helix-turn-helix domain C3496_02330 PF00005 ABC transporter C3496_02335 PF07853 Protein of unknown function (DUF1648) C3496_02335 PF13630 SdpI/YhfL protein family C3496_02340 PF01022 Bacterial regulatory protein, arsR family C3496_02345 PF00486 Transcriptional regulatory protein, C terminal C3496_02345 PF00072 Response regulator receiver domain C3496_02350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_02355 PF02687 FtsX-like permease family C3496_02360 PF02687 FtsX-like permease family C3496_02365 PF00005 ABC transporter C3496_02370 PF02687 FtsX-like permease family C3496_02380 PF02447 GntP family permease C3496_02385 PF00392 Bacterial regulatory proteins, gntR family C3496_02385 PF07702 UTRA domain C3496_02395 PF07071 KDGP aldolase C3496_02400 PF03841 L-seryl-tRNA selenium transferase C3496_02405 PF01979 Amidohydrolase family C3496_02410 PF02557 D-alanyl-D-alanine carboxypeptidase C3496_02415 PF00512 His Kinase A (phospho-acceptor) domain C3496_02415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_02420 PF00486 Transcriptional regulatory protein, C terminal C3496_02420 PF00072 Response regulator receiver domain C3496_02425 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C3496_02425 PF13378 Enolase C-terminal domain-like C3496_02430 PF13193 AMP-binding enzyme C-terminal domain C3496_02430 PF00501 AMP-binding enzyme C3496_02440 PF00378 Enoyl-CoA hydratase/isomerase C3496_02445 PF00561 alpha/beta hydrolase fold C3496_02450 PF16582 Middle domain of thiamine pyrophosphate C3496_02450 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C3496_02450 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C3496_02455 PF00425 chorismate binding enzyme C3496_02460 PF01040 UbiA prenyltransferase family C3496_02465 PF01258 Prokaryotic dksA/traR C4-type zinc finger C3496_02470 PF00313 'Cold-shock' DNA-binding domain C3496_02490 PF00343 Carbohydrate phosphorylase C3496_02495 PF08323 Starch synthase catalytic domain C3496_02495 PF00534 Glycosyl transferases group 1 C3496_02500 PF00483 Nucleotidyl transferase C3496_02505 PF00483 Nucleotidyl transferase C3496_02510 PF00128 Alpha amylase, catalytic domain C3496_02510 PF02806 Alpha amylase, C-terminal all-beta domain C3496_02510 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C3496_02530 PF00056 lactate/malate dehydrogenase, NAD binding domain C3496_02530 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain C3496_02635 PF05697 Bacterial trigger factor protein (TF) C3496_02635 PF05698 Bacterial trigger factor protein (TF) C-terminus C3496_02675 PF02308 MgtC family C3496_02680 PF07885 Ion channel C3496_02680 PF02254 TrkA-N domain C3496_02685 PF08868 YugN-like family C3496_02690 PF00342 Phosphoglucose isomerase C3496_02700 PF04070 Domain of unknown function (DUF378) C3496_02705 PF00575 S1 RNA binding domain C3496_02710 PF00155 Aminotransferase class I and II C3496_02715 PF01037 Lrp/AsnC ligand binding domain C3496_02720 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C3496_02720 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C3496_02725 PF08386 TAP-like protein C3496_02725 PF00561 alpha/beta hydrolase fold C3496_02735 PF00155 Aminotransferase class I and II C3496_02745 PF08810 Kinase associated protein B C3496_02750 PF00929 Exonuclease C3496_02755 PF03600 Citrate transporter C3496_02775 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C3496_02775 PF03129 Anticodon binding domain C3496_02780 PF03061 Thioesterase superfamily C3496_02790 PF02632 BioY family C3496_02795 PF03023 Lipid II flippase MurJ C3496_02800 PF13439 Glycosyltransferase Family 4 C3496_02800 PF00534 Glycosyl transferases group 1 C3496_02820 PF09586 Bacterial membrane protein YfhO C3496_02825 PF04138 GtrA-like protein C3496_02830 PF00535 Glycosyl transferase family 2 C3496_02835 PF00483 Nucleotidyl transferase C3496_02840 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C3496_02840 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C3496_02840 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C3496_02840 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C3496_02845 PF02457 DisA bacterial checkpoint controller nucleotide-binding C3496_02845 PF10372 Bacterial membrane-spanning protein N-terminus C3496_02855 PF02789 Cytosol aminopeptidase family, N-terminal domain C3496_02855 PF00883 Cytosol aminopeptidase family, catalytic domain C3496_02860 PF06725 3D domain C3496_02870 PF13344 Haloacid dehalogenase-like hydrolase C3496_02870 PF00293 NUDIX domain C3496_02875 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3496_02880 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3496_02890 PF06445 GyrI-like small molecule binding domain C3496_02905 PF04463 Protein of unknown function (DUF523) C3496_02920 PF01521 Iron-sulphur cluster biosynthesis C3496_02925 PF01678 Diaminopimelate epimerase C3496_02930 PF07293 Protein of unknown function (DUF1450) C3496_02935 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3496_02945 PF00005 ABC transporter C3496_02945 PF09383 NIL domain C3496_02950 PF03649 Uncharacterised protein family (UPF0014) C3496_02955 PF03831 PhnA domain C3496_02955 PF08274 PhnA Zinc-Ribbon C3496_02970 PF01909 Nucleotidyltransferase domain C3496_02970 PF13427 Domain of unknown function (DUF4111) C3496_02975 PF07315 Protein of unknown function (DUF1462) C3496_02980 PF01106 NifU-like domain C3496_02995 PF04608 Phosphatidylglycerophosphatase A C3496_03010 PF00005 ABC transporter C3496_03010 PF02687 FtsX-like permease family C3496_03010 PF12704 MacB-like periplasmic core domain C3496_03015 PF02525 Flavodoxin-like fold C3496_03025 PF13344 Haloacid dehalogenase-like hydrolase C3496_03035 PF01934 Protein of unknown function DUF86 C3496_03040 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded C3496_03060 PF06265 Protein of unknown function (DUF1027) C3496_03065 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) C3496_03070 PF07739 TipAS antibiotic-recognition domain C3496_03070 PF13411 MerR HTH family regulatory protein C3496_03075 PF10086 YhfC intramembrane metalloprotease C3496_03095 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family C3496_03095 PF04055 Radical SAM superfamily C3496_03100 PF01551 Peptidase family M23 C3496_03110 PF08827 Domain of unknown function (DUF1805) C3496_03115 PF02872 5'-nucleotidase, C-terminal domain C3496_03125 PF01458 Uncharacterized protein family (UPF0051) C3496_03130 PF01592 NifU-like N terminal domain C3496_03135 PF00266 Aminotransferase class-V C3496_03140 PF01458 Uncharacterized protein family (UPF0051) C3496_03145 PF00005 ABC transporter C3496_03150 PF03180 NLPA lipoprotein C3496_03155 PF03180 NLPA lipoprotein C3496_03160 PF00528 Binding-protein-dependent transport system inner membrane component C3496_03165 PF09383 NIL domain C3496_03165 PF00005 ABC transporter C3496_03175 PF00085 Thioredoxin C3496_03180 PF01751 Toprim domain C3496_03195 PF01597 Glycine cleavage H-protein C3496_03200 PF03960 ArsC family C3496_03235 PF00056 lactate/malate dehydrogenase, NAD binding domain C3496_03235 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain C3496_03260 PF13305 Tetracyclin repressor-like, C-terminal domain C3496_03260 PF00440 Bacterial regulatory proteins, tetR family C3496_03265 PF00753 Metallo-beta-lactamase superfamily C3496_03270 PF02770 Acyl-CoA dehydrogenase, middle domain C3496_03270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C3496_03270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C3496_03280 PF00108 Thiolase, N-terminal domain C3496_03280 PF02803 Thiolase, C-terminal domain C3496_03285 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C3496_03285 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C3496_03285 PF00378 Enoyl-CoA hydratase/isomerase C3496_03295 PF14115 YuzL-like protein C3496_03300 PF07943 Penicillin-binding protein 5, C-terminal domain C3496_03300 PF00768 D-alanyl-D-alanine carboxypeptidase C3496_03305 PF01619 Proline dehydrogenase C3496_03310 PF10835 Protein of unknown function (DUF2573) C3496_03315 PF01910 Thiamine-binding protein C3496_03320 PF02743 Cache domain C3496_03320 PF00672 HAMP domain C3496_03320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3496_03335 PF07690 Major Facilitator Superfamily C3496_03340 PF13520 Amino acid permease C3496_03355 PF02096 60Kd inner membrane protein C3496_03365 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 C3496_03365 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) C3496_03410 PF09335 SNARE associated Golgi protein C3496_03420 PF03734 L,D-transpeptidase catalytic domain C3496_03420 PF17969 L,D-transpeptidase C-terminal domain C3496_03425 PF00486 Transcriptional regulatory protein, C terminal C3496_03425 PF00072 Response regulator receiver domain C3496_03430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_03430 PF00512 His Kinase A (phospho-acceptor) domain C3496_03430 PF00989 PAS fold C3496_03430 PF16736 Single Cache-like C3496_03445 PF09334 tRNA synthetases class I (M) C3496_03445 PF08264 Anticodon-binding domain of tRNA C3496_03455 PF02743 Cache domain C3496_03455 PF00672 HAMP domain C3496_03455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3496_03460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3496_03460 PF00672 HAMP domain C3496_03460 PF02743 Cache domain C3496_03465 PF01883 Iron-sulfur cluster assembly protein C3496_03470 PF07504 Fungalysin/Thermolysin Propeptide Motif C3496_03470 PF02868 Thermolysin metallopeptidase, alpha-helical domain C3496_03470 PF01447 Thermolysin metallopeptidase, catalytic domain C3496_03470 PF03413 Peptidase propeptide and YPEB domain C3496_03475 PF02678 Pirin C3496_03475 PF17954 Quercetinase C-terminal cupin domain C3496_03480 PF01047 MarR family C3496_03490 PF09335 SNARE associated Golgi protein C3496_03495 PF00999 Sodium/hydrogen exchanger family C3496_03500 PF02080 TrkA-C domain C3496_03510 PF01235 Sodium:alanine symporter family C3496_03515 PF00210 Ferritin-like domain C3496_03530 PF03641 Possible lysine decarboxylase C3496_03540 PF00210 Ferritin-like domain C3496_03550 PF01773 Na+ dependent nucleoside transporter N-terminus C3496_03550 PF07662 Na+ dependent nucleoside transporter C-terminus C3496_03555 PF07662 Na+ dependent nucleoside transporter C-terminus C3496_03555 PF01773 Na+ dependent nucleoside transporter N-terminus C3496_03560 PF01235 Sodium:alanine symporter family C3496_03565 PF01235 Sodium:alanine symporter family C3496_03570 PF13460 NAD(P)H-binding C3496_03590 PF00248 Aldo/keto reductase family C3496_03595 PF07690 Major Facilitator Superfamily C3496_03600 PF01638 HxlR-like helix-turn-helix C3496_03605 PF07849 Protein of unknown function (DUF1641) C3496_03610 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3496_03615 PF01479 S4 domain C3496_03615 PF00579 tRNA synthetases class I (W and Y) C3496_03620 PF01565 FAD binding domain C3496_03620 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain C3496_03630 PF00672 HAMP domain C3496_03630 PF17202 Single cache domain 3 C3496_03630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3496_03640 PF02537 CrcB-like protein, Camphor Resistance (CrcB) C3496_03645 PF02537 CrcB-like protein, Camphor Resistance (CrcB) C3496_03660 PF13302 Acetyltransferase (GNAT) domain C3496_03665 PF06146 Phosphate-starvation-inducible E C3496_03680 PF00005 ABC transporter C3496_03685 PF01032 FecCD transport family C3496_03690 PF01032 FecCD transport family C3496_03700 PF00486 Transcriptional regulatory protein, C terminal C3496_03700 PF00072 Response regulator receiver domain C3496_03710 PF01668 SmpB protein C3496_03720 PF00575 S1 RNA binding domain C3496_03720 PF00773 RNB domain C3496_03720 PF17876 Cold shock domain C3496_03720 PF08206 Ribonuclease B OB domain C3496_03725 PF12146 Serine aminopeptidase, S33 C3496_03730 PF03840 Preprotein translocase SecG subunit C3496_03735 PF04172 LrgB-like family C3496_03740 PF03788 LrgA family C3496_03745 PF01156 Inosine-uridine preferring nucleoside hydrolase C3496_03750 PF03952 Enolase, N-terminal domain C3496_03750 PF00113 Enolase, C-terminal TIM barrel domain C3496_03755 PF06415 BPG-independent PGAM N-terminus (iPGM_N) C3496_03755 PF01676 Metalloenzyme superfamily C3496_03760 PF00121 Triosephosphate isomerase C3496_03765 PF00162 Phosphoglycerate kinase C3496_03770 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C3496_03770 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C3496_03775 PF04198 Putative sugar-binding domain C3496_03785 PF00309 Sigma-54 factor, Activator interacting domain (AID) C3496_03785 PF04963 Sigma-54 factor, core binding domain C3496_03785 PF04552 Sigma-54, DNA binding domain C3496_03805 PF03862 SpoVAC/SpoVAEB sporulation membrane protein C3496_03810 PF07451 Stage V sporulation protein AD (SpoVAD) C3496_03815 PF03862 SpoVAC/SpoVAEB sporulation membrane protein C3496_03825 PF04239 Protein of unknown function (DUF421) C3496_03830 PF00574 Clp protease C3496_03835 PF00381 PTS HPr component phosphorylation site C3496_03840 PF10298 WhiA N-terminal LAGLIDADG-like domain C3496_03840 PF02650 WhiA C-terminal HTH domain C3496_03840 PF14527 WhiA LAGLIDADG-like domain C3496_03845 PF01933 Uncharacterised protein family UPF0052 C3496_03850 PF03668 P-loop ATPase protein family C3496_03855 PF00293 NUDIX domain C3496_03865 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3496_03875 PF14602 Hexapeptide repeat of succinyl-transferase C3496_03880 PF13419 Haloacid dehalogenase-like hydrolase C3496_03885 PF01790 Prolipoprotein diacylglyceryl transferase C3496_03890 PF02603 HPr Serine kinase N terminus C3496_03890 PF07475 HPr Serine kinase C-terminal domain C3496_03895 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV C3496_03905 PF00005 ABC transporter C3496_03905 PF17760 UvrA interaction domain C3496_03905 PF17755 UvrA DNA-binding domain C3496_03910 PF00271 Helicase conserved C-terminal domain C3496_03910 PF04851 Type III restriction enzyme, res subunit C3496_03910 PF02151 UvrB/uvrC motif C3496_03910 PF12344 Ultra-violet resistance protein B C3496_03910 PF17757 UvrB interaction domain C3496_03925 PF13411 MerR HTH family regulatory protein C3496_03925 PF07739 TipAS antibiotic-recognition domain C3496_03950 PF03601 Conserved hypothetical protein 698 C3496_03955 PF03466 LysR substrate binding domain C3496_03955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3496_03960 PF00376 MerR family regulatory protein C3496_03960 PF09278 MerR, DNA binding C3496_03965 PF03358 NADPH-dependent FMN reductase C3496_03975 PF01906 Putative heavy-metal-binding C3496_03980 PF00664 ABC transporter transmembrane region C3496_03980 PF00005 ABC transporter C3496_03985 PF17820 PDZ domain C3496_03990 PF17820 PDZ domain C3496_03990 PF03572 Peptidase family S41 C3496_03990 PF01471 Putative peptidoglycan binding domain C3496_03995 PF02687 FtsX-like permease family C3496_03995 PF18075 FtsX extracellular domain C3496_04000 PF00005 ABC transporter C3496_04005 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C3496_04015 PF07517 SecA DEAD-like domain C3496_04015 PF07516 SecA Wing and Scaffold domain C3496_04015 PF01043 SecA preprotein cross-linking domain C3496_04015 PF02810 SEC-C motif C3496_04020 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus C3496_04020 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C3496_04025 PF00313 'Cold-shock' DNA-binding domain C3496_04035 PF00271 Helicase conserved C-terminal domain C3496_04035 PF04851 Type III restriction enzyme, res subunit C3496_04040 PF00877 NlpC/P60 family C3496_04040 PF01476 LysM domain C3496_04045 PF01638 HxlR-like helix-turn-helix C3496_04055 PF02645 Uncharacterised protein, DegV family COG1307 C3496_04060 PF01205 Uncharacterized protein family UPF0029 C3496_04060 PF09186 Domain of unknown function (DUF1949) C3496_04065 PF03816 Cell envelope-related transcriptional attenuator domain C3496_04070 PF02350 UDP-N-acetylglucosamine 2-epimerase C3496_04075 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C3496_04075 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C3496_04075 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C3496_04080 PF00953 Glycosyl transferase family 4 C3496_04085 PF01522 Polysaccharide deacetylase C3496_04090 PF00874 PRD domain C3496_04090 PF03610 PTS system fructose IIA component C3496_04090 PF00158 Sigma-54 interaction domain C3496_04100 PF02417 Chromate transporter C3496_04105 PF04794 YdjC-like protein C3496_04110 PF02056 Family 4 glycosyl hydrolase C3496_04110 PF11975 Family 4 glycosyl hydrolase C-terminal domain C3496_04115 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit C3496_04120 PF02378 Phosphotransferase system, EIIC C3496_04125 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C3496_04135 PF02675 S-adenosylmethionine decarboxylase C3496_04140 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit C3496_04145 PF02378 Phosphotransferase system, EIIC C3496_04150 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C3496_04155 PF00375 Sodium:dicarboxylate symporter family C3496_04165 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C3496_04175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3496_04175 PF03466 LysR substrate binding domain C3496_04190 PF01654 Cytochrome bd terminal oxidase subunit I C3496_04195 PF02322 Cytochrome bd terminal oxidase subunit II C3496_04200 PF02040 Arsenical pump membrane protein C3496_04205 PF13667 ThiC-associated domain C3496_04205 PF01964 Radical SAM ThiC family C3496_04210 PF02652 L-lactate permease C3496_04220 PF09988 Uncharacterized metal-binding protein (DUF2227) C3496_04235 PF00884 Sulfatase C3496_04245 PF01063 Amino-transferase class IV C3496_04250 PF01476 LysM domain C3496_04250 PF00877 NlpC/P60 family C3496_04255 PF01773 Na+ dependent nucleoside transporter N-terminus C3496_04255 PF07662 Na+ dependent nucleoside transporter C-terminus C3496_04275 PF02028 BCCT, betaine/carnitine/choline family transporter C3496_04285 PF01476 LysM domain C3496_04285 PF06725 3D domain C3496_04295 PF04434 SWIM zinc finger C3496_04300 PF00176 SNF2 family N-terminal domain C3496_04300 PF00271 Helicase conserved C-terminal domain C3496_04300 PF12419 SNF2 Helicase protein C3496_04330 PF04545 Sigma-70, region 4 C3496_04330 PF04542 Sigma-70 region 2 C3496_04335 PF04893 Yip1 domain C3496_04340 PF12704 MacB-like periplasmic core domain C3496_04340 PF02687 FtsX-like permease family C3496_04345 PF00005 ABC transporter C3496_04365 PF07690 Major Facilitator Superfamily C3496_04380 PF16736 Single Cache-like C3496_04380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_04380 PF00989 PAS fold C3496_04380 PF00512 His Kinase A (phospho-acceptor) domain C3496_04385 PF00072 Response regulator receiver domain C3496_04385 PF00486 Transcriptional regulatory protein, C terminal C3496_04390 PF16363 GDP-mannose 4,6 dehydratase C3496_04395 PF03816 Cell envelope-related transcriptional attenuator domain C3496_04405 PF07977 FabA-like domain C3496_04410 PF02350 UDP-N-acetylglucosamine 2-epimerase C3496_04425 PF08239 Bacterial SH3 domain C3496_04425 PF00005 ABC transporter C3496_04430 PF01061 ABC-2 type transporter C3496_04435 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C3496_04435 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C3496_04435 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C3496_04455 PF00535 Glycosyl transferase family 2 C3496_04480 PF12116 Stage III sporulation protein D C3496_04495 PF01551 Peptidase family M23 C3496_04505 PF00005 ABC transporter C3496_04510 PF00072 Response regulator receiver domain C3496_04510 PF04397 LytTr DNA-binding domain C3496_04515 PF08486 Stage II sporulation protein C3496_04520 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C3496_04530 PF06612 Protein of unknown function (DUF1146) C3496_04535 PF00361 Proton-conducting membrane transporter C3496_04540 PF00361 Proton-conducting membrane transporter C3496_04545 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C3496_04545 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus C3496_04545 PF00361 Proton-conducting membrane transporter C3496_04550 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C3496_04555 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 C3496_04565 PF00146 NADH dehydrogenase C3496_04570 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit C3496_04575 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit C3496_04580 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C3496_04585 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 C3496_04590 PF00990 Diguanylate cyclase, GGDEF domain C3496_04590 PF00563 EAL domain C3496_04590 PF03707 Bacterial signalling protein N terminal repeat C3496_04605 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain C3496_04605 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain C3496_04610 PF02874 ATP synthase alpha/beta family, beta-barrel domain C3496_04610 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C3496_04615 PF00231 ATP synthase C3496_04620 PF02874 ATP synthase alpha/beta family, beta-barrel domain C3496_04620 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C3496_04620 PF00306 ATP synthase alpha/beta chain, C terminal domain C3496_04625 PF00213 ATP synthase delta (OSCP) subunit C3496_04630 PF00430 ATP synthase B/B' CF(0) C3496_04635 PF00137 ATP synthase subunit C C3496_04640 PF00119 ATP synthase A chain C3496_04645 PF03899 ATP synthase I chain C3496_04665 PF00464 Serine hydroxymethyltransferase C3496_04670 PF04260 Protein of unknown function (DUF436) C3496_04675 PF02502 Ribose/Galactose Isomerase C3496_04680 PF01451 Low molecular weight phosphotyrosine protein phosphatase C3496_04690 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C3496_04695 PF07681 DoxX C3496_04700 PF01613 Flavin reductase like domain C3496_04715 PF02659 Putative manganese efflux pump C3496_04720 PF01300 Telomere recombination C3496_04720 PF03481 Putative GTP-binding controlling metal-binding C3496_04730 PF09551 Stage II sporulation protein R (spore_II_R) C3496_04735 PF13847 Methyltransferase domain C3496_04735 PF17827 PrmC N-terminal domain C3496_04740 PF03462 PCRF domain C3496_04740 PF00472 RF-1 domain C3496_04745 PF00265 Thymidine kinase C3496_04750 PF01197 Ribosomal protein L31 C3496_04760 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C3496_04760 PF07497 Rho termination factor, RNA-binding domain C3496_04760 PF07498 Rho termination factor, N-terminal domain C3496_04765 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded C3496_04775 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C3496_04780 PF01116 Fructose-bisphosphate aldolase class-II C3496_04785 PF00072 Response regulator receiver domain C3496_04790 PF10740 Domain of unknown function (DUF2529) C3496_04795 PF06418 CTP synthase N-terminus C3496_04795 PF00117 Glutamine amidotransferase class-I C3496_04800 PF05066 HB1, ASXL, restriction endonuclease HTH domain C3496_04810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C3496_04810 PF02770 Acyl-CoA dehydrogenase, middle domain C3496_04810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C3496_04815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C3496_04815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C3496_04815 PF02770 Acyl-CoA dehydrogenase, middle domain C3496_04820 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C3496_04820 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C3496_04825 PF00108 Thiolase, N-terminal domain C3496_04825 PF02803 Thiolase, C-terminal domain C3496_04830 PF13183 4Fe-4S dicluster domain C3496_04830 PF02754 Cysteine-rich domain C3496_04835 PF13091 PLD-like domain C3496_04840 PF03851 UV-endonuclease UvdE C3496_04845 PF00563 EAL domain C3496_04845 PF00990 Diguanylate cyclase, GGDEF domain C3496_04845 PF03707 Bacterial signalling protein N terminal repeat C3496_04865 PF00072 Response regulator receiver domain C3496_04865 PF00196 Bacterial regulatory proteins, luxR family C3496_04870 PF07730 Histidine kinase C3496_04870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_04880 PF00005 ABC transporter C3496_04885 PF00557 Metallopeptidase family M24 C3496_04895 PF04389 Peptidase family M28 C3496_04895 PF02225 PA domain C3496_04915 PF04542 Sigma-70 region 2 C3496_04915 PF08281 Sigma-70, region 4 C3496_04920 PF03485 Arginyl tRNA synthetase N terminal domain C3496_04920 PF00750 tRNA synthetases class I (R) C3496_04920 PF05746 DALR anticodon binding domain C3496_04925 PF09148 Domain of unknown function (DUF1934) C3496_04930 PF02016 LD-carboxypeptidase N-terminal domain C3496_04930 PF17676 LD-carboxypeptidase C-terminal domain C3496_04950 PF00491 Arginase family C3496_04955 PF17284 Spermidine synthase tetramerisation domain C3496_04960 PF07690 Major Facilitator Superfamily C3496_04965 PF13411 MerR HTH family regulatory protein C3496_04970 PF03009 Glycerophosphoryl diester phosphodiesterase family C3496_04975 PF00912 Transglycosylase C3496_04975 PF00905 Penicillin binding protein transpeptidase domain C3496_04980 PF08741 YwhD family C3496_04985 PF02163 Peptidase family M50 C3496_04990 PF01361 Tautomerase enzyme C3496_04995 PF01966 HD domain C3496_05000 PF01497 Periplasmic binding protein C3496_05005 PF00005 ABC transporter C3496_05010 PF01032 FecCD transport family C3496_05015 PF01032 FecCD transport family C3496_05020 PF07293 Protein of unknown function (DUF1450) C3496_05035 PF03099 Biotin/lipoate A/B protein ligase family C3496_05040 PF01515 Phosphate acetyl/butaryl transferase C3496_05045 PF06778 Chlorite dismutase C3496_05050 PF00768 D-alanyl-D-alanine carboxypeptidase C3496_05050 PF07943 Penicillin-binding protein 5, C-terminal domain C3496_05055 PF07486 Cell Wall Hydrolase C3496_05060 PF09671 Spore coat protein (Spore_GerQ) C3496_05065 PF04241 Protein of unknown function (DUF423) C3496_05075 PF02254 TrkA-N domain C3496_05075 PF07885 Ion channel C3496_05080 PF00860 Permease family C3496_05090 PF12823 Domain of unknown function (DUF3817) C3496_05095 PF03167 Uracil DNA glycosylase superfamily C3496_05100 PF12679 ABC-2 family transporter protein C3496_05105 PF00005 ABC transporter C3496_05110 PF13472 GDSL-like Lipase/Acylhydrolase family C3496_05115 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C3496_05115 PF00356 Bacterial regulatory proteins, lacI family C3496_05125 PF01842 ACT domain C3496_05125 PF00742 Homoserine dehydrogenase C3496_05125 PF03447 Homoserine dehydrogenase, NAD binding domain C3496_05130 PF04204 Homoserine O-succinyltransferase C3496_05135 PF01053 Cys/Met metabolism PLP-dependent enzyme C3496_05145 PF13419 Haloacid dehalogenase-like hydrolase C3496_05150 PF00027 Cyclic nucleotide-binding domain C3496_05155 PF02525 Flavodoxin-like fold C3496_05160 PF00196 Bacterial regulatory proteins, luxR family C3496_05160 PF00072 Response regulator receiver domain C3496_05165 PF13185 GAF domain C3496_05165 PF07730 Histidine kinase C3496_05170 PF08543 Phosphomethylpyrimidine kinase C3496_05175 PF07694 5TMR of 5TMR-LYT C3496_05175 PF00990 Diguanylate cyclase, GGDEF domain C3496_05180 PF04328 Selenoprotein, putative C3496_05185 PF02554 Carbon starvation protein CstA C3496_05185 PF13722 5TM C-terminal transporter carbon starvation CstA C3496_05190 PF04397 LytTr DNA-binding domain C3496_05190 PF00072 Response regulator receiver domain C3496_05195 PF07690 Major Facilitator Superfamily C3496_05200 PF03808 Glycosyl transferase WecB/TagA/CpsF family C3496_05215 PF03458 UPF0126 domain C3496_05220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3496_05230 PF03061 Thioesterase superfamily C3496_05240 PF00535 Glycosyl transferase family 2 C3496_05245 PF00005 ABC transporter C3496_05245 PF12848 ABC transporter C3496_05255 PF00440 Bacterial regulatory proteins, tetR family C3496_05260 PF00873 AcrB/AcrD/AcrF family C3496_05265 PF01625 Peptide methionine sulfoxide reductase C3496_05265 PF01641 SelR domain C3496_05270 PF01594 AI-2E family transporter C3496_05275 PF04172 LrgB-like family C3496_05280 PF03788 LrgA family C3496_05285 PF04397 LytTr DNA-binding domain C3496_05285 PF00072 Response regulator receiver domain C3496_05290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_05290 PF13492 GAF domain C3496_05290 PF06580 Histidine kinase C3496_05290 PF07694 5TMR of 5TMR-LYT C3496_05295 PF07690 Major Facilitator Superfamily C3496_05300 PF02028 BCCT, betaine/carnitine/choline family transporter C3496_05305 PF02898 Nitric oxide synthase, oxygenase domain C3496_05315 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C3496_05315 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C3496_05325 PF02293 AmiS/UreI family transporter C3496_05335 PF16363 GDP-mannose 4,6 dehydratase C3496_05340 PF03006 Haemolysin-III related C3496_05350 PF03880 DbpA RNA binding domain C3496_05350 PF00271 Helicase conserved C-terminal domain C3496_05350 PF00270 DEAD/DEAH box helicase C3496_05355 PF00478 IMP dehydrogenase / GMP reductase domain C3496_05360 PF01432 Peptidase family M3 C3496_05360 PF08439 Oligopeptidase F C3496_05370 PF02590 Predicted SPOUT methyltransferase C3496_05380 PF13180 PDZ domain C3496_05385 PF00753 Metallo-beta-lactamase superfamily C3496_05390 PF09648 YycH protein C3496_05395 PF07435 YycH protein C3496_05400 PF00672 HAMP domain C3496_05400 PF00512 His Kinase A (phospho-acceptor) domain C3496_05400 PF13426 PAS domain C3496_05400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_05405 PF00072 Response regulator receiver domain C3496_05405 PF00486 Transcriptional regulatory protein, C terminal C3496_05430 PF00709 Adenylosuccinate synthetase C3496_05435 PF00772 DnaB-like helicase N terminal domain C3496_05435 PF03796 DnaB-like helicase C terminal domain C3496_05440 PF03948 Ribosomal protein L9, C-terminal domain C3496_05440 PF01281 Ribosomal protein L9, N-terminal domain C3496_05445 PF02272 DHHA1 domain C3496_05445 PF01368 DHH family C3496_05450 PF09991 Predicted membrane protein (DUF2232) C3496_05455 PF01084 Ribosomal protein S18 C3496_05460 PF00436 Single-strand binding protein family C3496_05465 PF01250 Ribosomal protein S6 C3496_05470 PF01926 50S ribosome-binding GTPase C3496_05470 PF06071 Protein of unknown function (DUF933) C3496_05475 PF06107 Bacterial protein of unknown function (DUF951) C3496_05480 PF00924 Mechanosensitive ion channel C3496_05485 PF06866 Protein of unknown function (DUF1256) C3496_05490 PF17762 HTH domain found in ParB protein C3496_05490 PF02195 ParB-like nuclease domain C3496_05495 PF13614 AAA domain C3496_05500 PF17762 HTH domain found in ParB protein C3496_05500 PF02195 ParB-like nuclease domain C3496_05505 PF02527 rRNA small subunit methyltransferase G C3496_05510 PF01134 Glucose inhibited division protein A C3496_05510 PF13932 GidA associated domain C3496_05515 PF12631 MnmE helical domain C3496_05515 PF01926 50S ribosome-binding GTPase C3496_05515 PF10396 GTP-binding protein TrmE N-terminus C3496_05520 PF14804 Jag N-terminus C3496_05520 PF01424 R3H domain C3496_05525 PF02096 60Kd inner membrane protein C3496_05530 PF00825 Ribonuclease P C3496_05535 PF00468 Ribosomal protein L34 C3496_05540 PF00308 Bacterial dnaA protein C3496_05540 PF08299 Bacterial dnaA protein helix-turn-helix C3496_05540 PF11638 DnaA N-terminal domain C3496_05545 PF02768 DNA polymerase III beta subunit, C-terminal domain C3496_05545 PF02767 DNA polymerase III beta subunit, central domain C3496_05545 PF00712 DNA polymerase III beta subunit, N-terminal domain C3496_05555 PF02463 RecF/RecN/SMC N terminal domain C3496_05560 PF00204 DNA gyrase B C3496_05560 PF00986 DNA gyrase B subunit, carboxyl terminus C3496_05560 PF01751 Toprim domain C3496_05560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_05565 PF00521 DNA gyrase/topoisomerase IV, subunit A C3496_05565 PF03989 DNA gyrase C-terminal domain, beta-propeller C3496_05595 PF14175 YaaC-like Protein C3496_05600 PF00571 CBS domain C3496_05600 PF00478 IMP dehydrogenase / GMP reductase domain C3496_05605 PF00768 D-alanyl-D-alanine carboxypeptidase C3496_05605 PF07943 Penicillin-binding protein 5, C-terminal domain C3496_05610 PF01680 SOR/SNZ family C3496_05615 PF01174 SNO glutamine amidotransferase family C3496_05620 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C3496_05620 PF02403 Seryl-tRNA synthetase N-terminal domain C3496_05635 PF01712 Deoxynucleoside kinase C3496_05640 PF01712 Deoxynucleoside kinase C3496_05645 PF00857 Isochorismatase family C3496_05655 PF14437 MafB19-like deaminase C3496_05665 PF12169 DNA polymerase III subunits gamma and tau domain III C3496_05670 PF02575 YbaB/EbfC DNA-binding family C3496_05675 PF13662 Toprim domain C3496_05675 PF02132 RecR protein C3496_05680 PF10704 Protein of unknown function (DUF2508) C3496_05685 PF07441 SigmaK-factor processing regulatory protein BofA C3496_05720 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain C3496_05720 PF01276 Orn/Lys/Arg decarboxylase, major domain C3496_05725 PF02223 Thymidylate kinase C3496_05730 PF09115 DNA polymerase III, delta subunit, C terminal C3496_05735 PF04468 PSP1 C-terminal conserved region C3496_05740 PF06156 Initiation control protein YabA C3496_05745 PF05175 Methyltransferase small domain C3496_05750 PF01541 GIY-YIG catalytic domain C3496_05760 PF18277 AbrB C-terminal domain C3496_05760 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin C3496_05765 PF09334 tRNA synthetases class I (M) C3496_05765 PF01588 Putative tRNA binding domain C3496_05765 PF08264 Anticodon-binding domain of tRNA C3496_05770 PF01026 TatD related DNase C3496_05775 PF13331 Domain of unknown function (DUF4093) C3496_05775 PF13662 Toprim domain C3496_05780 PF00398 Ribosomal RNA adenine dimethylase C3496_05785 PF05582 YabG peptidase U57 C3496_05790 PF06257 Biofilm formation stimulator VEG C3496_05795 PF00269 Small, acid-soluble spore proteins, alpha/beta type C3496_05800 PF00288 GHMP kinases N terminal domain C3496_05800 PF08544 GHMP kinases C terminal C3496_05805 PF00156 Phosphoribosyl transferase domain C3496_05805 PF09182 Bacterial purine repressor, N-terminal C3496_05815 PF01042 Endoribonuclease L-PSP C3496_05820 PF04026 SpoVG C3496_05825 PF00132 Bacterial transferase hexapeptide (six repeats) C3496_05825 PF00483 Nucleotidyl transferase C3496_05830 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase C3496_05830 PF14572 Phosphoribosyl synthetase-associated domain C3496_05835 PF01195 Peptidyl-tRNA hydrolase C3496_05845 PF00270 DEAD/DEAH box helicase C3496_05845 PF03461 TRCF domain C3496_05845 PF00271 Helicase conserved C-terminal domain C3496_05845 PF17757 UvrB interaction domain C3496_05845 PF02559 CarD-like/TRCF domain C3496_05850 PF15714 Stage V sporulation protein T C-terminal, transcription factor C3496_05850 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin C3496_05855 PF14667 Polysaccharide biosynthesis C-terminal domain C3496_05855 PF01943 Polysaccharide biosynthesis protein C3496_05860 PF03819 MazG nucleotide pyrophosphohydrolase domain C3496_05860 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C3496_05865 PF01479 S4 domain C3496_05870 PF07873 YabP family C3496_05875 PF09578 Spore cortex protein YabQ (Spore_YabQ) C3496_05885 PF00575 S1 RNA binding domain C3496_05900 PF07228 Stage II sporulation protein E (SpoIIE) C3496_05905 PF09179 TilS substrate binding domain C3496_05905 PF01171 PP-loop family C3496_05905 PF11734 TilS substrate C-terminal domain C3496_05910 PF00156 Phosphoribosyl transferase domain C3496_05915 PF17862 AAA+ lid domain C3496_05915 PF01434 Peptidase family M41 C3496_05915 PF00004 ATPase family associated with various cellular activities (AAA) C3496_05915 PF06480 FtsH Extracellular C3496_05920 PF03309 Type III pantothenate kinase C3496_05925 PF01430 Hsp33 protein C3496_05930 PF00291 Pyridoxal-phosphate dependent enzyme C3496_05935 PF00425 chorismate binding enzyme C3496_05935 PF04715 Anthranilate synthase component I, N terminal region C3496_05940 PF00117 Glutamine amidotransferase class-I C3496_05945 PF01063 Amino-transferase class IV C3496_05950 PF00809 Pterin binding enzyme C3496_05955 PF02152 Dihydroneopterin aldolase C3496_05960 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C3496_05965 PF01381 Helix-turn-helix C3496_05970 PF01207 Dihydrouridine synthase (Dus) C3496_05975 PF01336 OB-fold nucleic acid binding domain C3496_05975 PF00152 tRNA synthetases class II (D, K and N) C3496_06055 PF05848 CtsR N-terminal HTH domain C3496_06055 PF17727 CtsR C-terminal dimerization domain C3496_06060 PF02151 UvrB/uvrC motif C3496_06065 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain C3496_06070 PF17871 AAA lid domain C3496_06070 PF10431 C-terminal, D2-small domain, of ClpB protein C3496_06070 PF02861 Clp amino terminal domain, pathogenicity island component C3496_06070 PF00004 ATPase family associated with various cellular activities (AAA) C3496_06070 PF07724 AAA domain (Cdc48 subfamily) C3496_06075 PF18073 Rubredoxin metal binding domain C3496_06080 PF10635 DisA bacterial checkpoint controller linker region C3496_06080 PF02457 DisA bacterial checkpoint controller nucleotide-binding C3496_06090 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase C3496_06095 PF02542 YgbB family C3496_06100 PF00749 tRNA synthetases class I (E and Q), catalytic domain C3496_06105 PF06426 Serine acetyltransferase, N-terminal C3496_06105 PF00132 Bacterial transferase hexapeptide (six repeats) C3496_06110 PF09190 DALR domain C3496_06110 PF01406 tRNA synthetases class I (C) catalytic domain C3496_06115 PF00636 Ribonuclease III domain C3496_06120 PF08032 RNA 2'-O ribose methyltransferase substrate binding C3496_06120 PF00588 SpoU rRNA Methylase family C3496_06125 PF05991 YacP-like NYN domain C3496_06130 PF08281 Sigma-70, region 4 C3496_06130 PF04542 Sigma-70 region 2 C3496_06135 PF00471 Ribosomal protein L33 C3496_06140 PF00584 SecE/Sec61-gamma subunits of protein translocation complex C3496_06145 PF00467 KOW motif C3496_06145 PF02357 Transcription termination factor nusG C3496_06150 PF00298 Ribosomal protein L11, RNA binding domain C3496_06150 PF03946 Ribosomal protein L11, N-terminal domain C3496_06155 PF00687 Ribosomal protein L1p/L10e family C3496_06160 PF00466 Ribosomal protein L10 C3496_06165 PF00542 Ribosomal protein L7/L12 C-terminal domain C3496_06165 PF16320 Ribosomal protein L7/L12 dimerisation domain C3496_06170 PF05175 Methyltransferase small domain C3496_06175 PF04560 RNA polymerase Rpb2, domain 7 C3496_06175 PF00562 RNA polymerase Rpb2, domain 6 C3496_06175 PF04565 RNA polymerase Rpb2, domain 3 C3496_06175 PF04561 RNA polymerase Rpb2, domain 2 C3496_06175 PF04563 RNA polymerase beta subunit C3496_06175 PF10385 RNA polymerase beta subunit external 1 domain C3496_06180 PF05000 RNA polymerase Rpb1, domain 4 C3496_06180 PF00623 RNA polymerase Rpb1, domain 2 C3496_06180 PF04997 RNA polymerase Rpb1, domain 1 C3496_06180 PF04998 RNA polymerase Rpb1, domain 5 C3496_06180 PF04983 RNA polymerase Rpb1, domain 3 C3496_06185 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family C3496_06190 PF00164 Ribosomal protein S12/S23 C3496_06195 PF00177 Ribosomal protein S7p/S5e C3496_06200 PF00679 Elongation factor G C-terminus C3496_06200 PF14492 Elongation Factor G, domain II C3496_06200 PF03144 Elongation factor Tu domain 2 C3496_06200 PF03764 Elongation factor G, domain IV C3496_06200 PF00009 Elongation factor Tu GTP binding domain C3496_06205 PF00009 Elongation factor Tu GTP binding domain C3496_06205 PF03144 Elongation factor Tu domain 2 C3496_06205 PF03143 Elongation factor Tu C-terminal domain C3496_06210 PF00338 Ribosomal protein S10p/S20e C3496_06215 PF00297 Ribosomal protein L3 C3496_06220 PF00573 Ribosomal protein L4/L1 family C3496_06225 PF00276 Ribosomal protein L23 C3496_06230 PF03947 Ribosomal Proteins L2, C-terminal domain C3496_06230 PF00181 Ribosomal Proteins L2, RNA binding domain C3496_06235 PF00203 Ribosomal protein S19 C3496_06240 PF00237 Ribosomal protein L22p/L17e C3496_06245 PF00189 Ribosomal protein S3, C-terminal domain C3496_06245 PF07650 KH domain C3496_06250 PF00252 Ribosomal protein L16p/L10e C3496_06255 PF00831 Ribosomal L29 protein C3496_06260 PF00366 Ribosomal protein S17 C3496_06265 PF00238 Ribosomal protein L14p/L23e C3496_06270 PF00467 KOW motif C3496_06270 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 C3496_06275 PF00673 ribosomal L5P family C-terminus C3496_06275 PF00281 Ribosomal protein L5 C3496_06280 PF00253 Ribosomal protein S14p/S29e C3496_06285 PF00410 Ribosomal protein S8 C3496_06290 PF00347 Ribosomal protein L6 C3496_06295 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast C3496_06300 PF03719 Ribosomal protein S5, C-terminal domain C3496_06300 PF00333 Ribosomal protein S5, N-terminal domain C3496_06305 PF00327 Ribosomal protein L30p/L7e C3496_06310 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A C3496_06315 PF00344 SecY translocase C3496_06320 PF05191 Adenylate kinase, active site lid C3496_06325 PF00557 Metallopeptidase family M24 C3496_06330 PF01176 Translation initiation factor 1A / IF-1 C3496_06335 PF00444 Ribosomal protein L36 C3496_06340 PF00416 Ribosomal protein S13/S18 C3496_06345 PF00411 Ribosomal protein S11 C3496_06350 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain C3496_06350 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain C3496_06350 PF01000 RNA polymerase Rpb3/RpoA insert domain C3496_06355 PF01196 Ribosomal protein L17 C3496_06360 PF00005 ABC transporter C3496_06365 PF00005 ABC transporter C3496_06370 PF02361 Cobalt transport protein C3496_06375 PF01416 tRNA pseudouridine synthase C3496_06380 PF00572 Ribosomal protein L13 C3496_06385 PF00380 Ribosomal protein S9/S16 C3496_06395 PF01520 N-acetylmuramoyl-L-alanine amidase C3496_06400 PF10609 NUBPL iron-transfer P-loop NTPase C3496_06405 PF17898 Spore germination GerD central core domain C3496_06410 PF14089 KinB-signalling pathway activation in sporulation C3496_06415 PF01522 Polysaccharide deacetylase C3496_06485 PF02595 Glycerate kinase family C3496_06490 PF00491 Arginase family C3496_06495 PF02457 DisA bacterial checkpoint controller nucleotide-binding C3496_06500 PF07949 YbbR-like protein C3496_06505 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C3496_06505 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C3496_06505 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C3496_06505 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C3496_06515 PF01380 SIS domain C3496_06525 PF08722 TnsA endonuclease N terminal C3496_06525 PF08721 TnsA endonuclease C terminal C3496_06530 PF00665 Integrase core domain C3496_06535 PF11426 Tn7 transposition regulator TnsC C3496_06535 PF13401 AAA domain C3496_06550 PF02086 D12 class N6 adenine-specific DNA methyltransferase C3496_06600 PF00561 alpha/beta hydrolase fold C3496_06605 PF07729 FCD domain C3496_06605 PF00392 Bacterial regulatory proteins, gntR family C3496_06610 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C3496_06610 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C3496_06615 PF02447 GntP family permease C3496_06620 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C3496_06620 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain C3496_06625 PF00326 Prolyl oligopeptidase family C3496_06625 PF07676 WD40-like Beta Propeller Repeat C3496_06660 PF00528 Binding-protein-dependent transport system inner membrane component C3496_06665 PF00005 ABC transporter C3496_06665 PF09383 NIL domain C3496_06670 PF03180 NLPA lipoprotein C3496_06675 PF00107 Zinc-binding dehydrogenase C3496_06675 PF08240 Alcohol dehydrogenase GroES-like domain C3496_06685 PF01565 FAD binding domain C3496_06690 PF07690 Major Facilitator Superfamily C3496_06700 PF07690 Major Facilitator Superfamily C3496_06715 PF00528 Binding-protein-dependent transport system inner membrane component C3496_06720 PF12911 N-terminal TM domain of oligopeptide transport permease C C3496_06720 PF00528 Binding-protein-dependent transport system inner membrane component C3496_06725 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C3496_06725 PF00005 ABC transporter C3496_06730 PF00005 ABC transporter C3496_06730 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C3496_06735 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C3496_06745 PF12833 Helix-turn-helix domain C3496_06755 PF00440 Bacterial regulatory proteins, tetR family C3496_06765 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C3496_06770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C3496_06775 PF00248 Aldo/keto reductase family C3496_06780 PF03807 NADP oxidoreductase coenzyme F420-dependent C3496_06780 PF14748 Pyrroline-5-carboxylate reductase dimerisation C3496_06785 PF04973 Nicotinamide mononucleotide transporter C3496_06790 PF06800 Sugar transport protein C3496_06795 PF00528 Binding-protein-dependent transport system inner membrane component C3496_06805 PF12727 PBP superfamily domain C3496_06805 PF12728 Helix-turn-helix domain C3496_06820 PF03466 LysR substrate binding domain C3496_06820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3496_06825 PF00892 EamA-like transporter family C3496_06830 PF14142 YrzO-like protein C3496_06840 PF01553 Acyltransferase C3496_06855 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C3496_06855 PF00356 Bacterial regulatory proteins, lacI family C3496_06865 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) C3496_06865 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 C3496_06890 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) C3496_06915 PF12848 ABC transporter C3496_06915 PF00005 ABC transporter C3496_06915 PF16326 ABC transporter C-terminal domain C3496_06920 PF07730 Histidine kinase C3496_06925 PF00072 Response regulator receiver domain C3496_06925 PF00196 Bacterial regulatory proteins, luxR family C3496_06930 PF00005 ABC transporter C3496_06955 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C3496_06960 PF00528 Binding-protein-dependent transport system inner membrane component C3496_06965 PF00528 Binding-protein-dependent transport system inner membrane component C3496_06965 PF12911 N-terminal TM domain of oligopeptide transport permease C C3496_06970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C3496_06970 PF00005 ABC transporter C3496_06975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C3496_06975 PF00005 ABC transporter C3496_07015 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C3496_07020 PF01557 Fumarylacetoacetate (FAA) hydrolase family C3496_07035 PF13520 Amino acid permease C3496_07045 PF07478 D-ala D-ala ligase C-terminus C3496_07045 PF01820 D-ala D-ala ligase N-terminus C3496_07050 PF01225 Mur ligase family, catalytic domain C3496_07050 PF02875 Mur ligase family, glutamate ligase domain C3496_07050 PF08245 Mur ligase middle domain C3496_07055 PF00271 Helicase conserved C-terminal domain C3496_07055 PF00270 DEAD/DEAH box helicase C3496_07060 PF03851 UV-endonuclease UvdE C3496_07065 PF01694 Rhomboid family C3496_07070 PF01648 4'-phosphopantetheinyl transferase superfamily C3496_07080 PF00842 Alanine racemase, C-terminal domain C3496_07080 PF01168 Alanine racemase, N-terminal domain C3496_07085 PF01402 Ribbon-helix-helix protein, copG family C3496_07090 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system C3496_07095 PF17674 HHH domain C3496_07095 PF16921 Tex protein YqgF-like domain C3496_07095 PF09371 Tex-like protein N-terminal domain C3496_07095 PF00575 S1 RNA binding domain C3496_07105 PF17283 SprT-like zinc ribbon domain C3496_07105 PF10263 SprT-like family C3496_07190 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE C3496_07195 PF00814 Glycoprotease family C3496_07200 PF00583 Acetyltransferase (GNAT) family C3496_07205 PF00814 Glycoprotease family C3496_07210 PF12848 ABC transporter C3496_07210 PF16326 ABC transporter C-terminal domain C3496_07210 PF00005 ABC transporter C3496_07215 PF02629 CoA binding domain C3496_07215 PF06971 Putative DNA-binding protein N-terminus C3496_07225 PF02517 CPBP intramembrane metalloprotease C3496_07230 PF00166 Chaperonin 10 Kd subunit C3496_07235 PF00118 TCP-1/cpn60 chaperonin family C3496_07240 PF00958 GMP synthase C terminal domain C3496_07240 PF00117 Glutamine amidotransferase class-I C3496_07240 PF02540 NAD synthase C3496_07245 PF00860 Permease family C3496_07250 PF00486 Transcriptional regulatory protein, C terminal C3496_07250 PF00072 Response regulator receiver domain C3496_07255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_07255 PF00512 His Kinase A (phospho-acceptor) domain C3496_07255 PF00989 PAS fold C3496_07255 PF16736 Single Cache-like C3496_07280 PF01323 DSBA-like thioredoxin domain C3496_07340 PF02673 Bacitracin resistance protein BacA C3496_07350 PF00005 ABC transporter C3496_07355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_07355 PF00512 His Kinase A (phospho-acceptor) domain C3496_07360 PF00486 Transcriptional regulatory protein, C terminal C3496_07360 PF00072 Response regulator receiver domain C3496_07380 PF00892 EamA-like transporter family C3496_07410 PF00731 AIR carboxylase C3496_07415 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain C3496_07415 PF02222 ATP-grasp domain C3496_07420 PF00206 Lyase C3496_07420 PF10397 Adenylosuccinate lyase C-terminus C3496_07425 PF01259 SAICAR synthetase C3496_07430 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase C3496_07440 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain C3496_07440 PF02769 AIR synthase related protein, C-terminal domain C3496_07440 PF00586 AIR synthase related protein, N-terminal domain C3496_07445 PF00156 Phosphoribosyl transferase domain C3496_07450 PF00586 AIR synthase related protein, N-terminal domain C3496_07450 PF02769 AIR synthase related protein, C-terminal domain C3496_07455 PF00551 Formyl transferase C3496_07460 PF02142 MGS-like domain C3496_07460 PF01808 AICARFT/IMPCHase bienzyme C3496_07465 PF02844 Phosphoribosylglycinamide synthetase, N domain C3496_07465 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain C3496_07465 PF02843 Phosphoribosylglycinamide synthetase, C domain C3496_07490 PF01884 PcrB family C3496_07495 PF13361 UvrD-like helicase C-terminal domain C3496_07495 PF00580 UvrD/REP helicase N-terminal domain C3496_07500 PF00533 BRCA1 C Terminus (BRCT) domain C3496_07500 PF01653 NAD-dependent DNA ligase adenylation domain C3496_07500 PF12826 Helix-hairpin-helix motif C3496_07500 PF03119 NAD-dependent DNA ligase C4 zinc finger domain C3496_07500 PF03120 NAD-dependent DNA ligase OB-fold domain C3496_07505 PF07537 CamS sex pheromone cAM373 precursor C3496_07510 PF01925 Sulfite exporter TauE/SafE C3496_07515 PF00171 Aldehyde dehydrogenase family C3496_07525 PF00857 Isochorismatase family C3496_07535 PF09383 NIL domain C3496_07535 PF00005 ABC transporter C3496_07540 PF00528 Binding-protein-dependent transport system inner membrane component C3496_07545 PF03180 NLPA lipoprotein C3496_07560 PF02374 Anion-transporting ATPase C3496_07560 PF17886 HSP20-like domain found in ArsA C3496_07565 PF01047 MarR family C3496_07570 PF05360 yiaA/B two helix domain C3496_07575 PF02686 Glu-tRNAGln amidotransferase C subunit C3496_07580 PF01425 Amidase C3496_07585 PF02934 GatB/GatE catalytic domain C3496_07585 PF02637 GatB domain C3496_07590 PF00781 Diacylglycerol kinase catalytic domain C3496_07595 PF13419 Haloacid dehalogenase-like hydrolase C3496_07600 PF00202 Aminotransferase class-III C3496_07605 PF00158 Sigma-54 interaction domain C3496_07610 PF00171 Aldehyde dehydrogenase family C3496_07615 PF00893 Small Multidrug Resistance protein C3496_07620 PF02073 Thermophilic metalloprotease (M29) C3496_07635 PF01773 Na+ dependent nucleoside transporter N-terminus C3496_07635 PF07662 Na+ dependent nucleoside transporter C-terminus C3496_07635 PF07670 Nucleoside recognition C3496_07640 PF01938 TRAM domain C3496_07640 PF02475 Met-10+ like-protein C3496_07640 PF05958 tRNA (Uracil-5-)-methyltransferase C3496_07645 PF01207 Dihydrouridine synthase (Dus) C3496_07655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_07655 PF13188 PAS domain C3496_07655 PF00989 PAS fold C3496_07655 PF00512 His Kinase A (phospho-acceptor) domain C3496_07655 PF13426 PAS domain C3496_07660 PF07308 Protein of unknown function (DUF1456) C3496_07675 PF13378 Enolase C-terminal domain-like C3496_07675 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C3496_07685 PF03553 Na+/H+ antiporter family C3496_07690 PF01546 Peptidase family M20/M25/M40 C3496_07690 PF07687 Peptidase dimerisation domain C3496_07700 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3496_07700 PF13192 Thioredoxin domain C3496_07705 PF00578 AhpC/TSA family C3496_07710 PF01636 Phosphotransferase enzyme family C3496_07715 PF01008 Initiation factor 2 subunit family C3496_07720 PF00596 Class II Aldolase and Adducin N-terminal domain C3496_07725 PF01032 FecCD transport family C3496_07730 PF01032 FecCD transport family C3496_07735 PF01497 Periplasmic binding protein C3496_07745 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3496_07760 PF12728 Helix-turn-helix domain C3496_07795 PF13426 PAS domain C3496_07795 PF13188 PAS domain C3496_07795 PF00512 His Kinase A (phospho-acceptor) domain C3496_07795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_07795 PF00989 PAS fold C3496_07815 PF10127 RNA repair pathway DNA polymerase beta family C3496_07820 PF07690 Major Facilitator Superfamily C3496_07825 PF01266 FAD dependent oxidoreductase C3496_07825 PF00355 Rieske [2Fe-2S] domain C3496_07835 PF00528 Binding-protein-dependent transport system inner membrane component C3496_07840 PF00497 Bacterial extracellular solute-binding proteins, family 3 C3496_07845 PF00005 ABC transporter C3496_07850 PF12729 Four helix bundle sensory module for signal transduction C3496_07850 PF00672 HAMP domain C3496_07850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3496_07855 PF00128 Alpha amylase, catalytic domain C3496_07855 PF16657 Maltogenic Amylase, C-terminal domain C3496_07860 PF00367 phosphotransferase system, EIIB C3496_07860 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C3496_07860 PF02378 Phosphotransferase system, EIIC C3496_07865 PF03372 Endonuclease/Exonuclease/phosphatase family C3496_07870 PF01061 ABC-2 type transporter C3496_07875 PF01751 Toprim domain C3496_07875 PF01131 DNA topoisomerase C3496_07880 PF02110 Hydroxyethylthiazole kinase family C3496_07885 PF02581 Thiamine monophosphate synthase C3496_07895 PF03605 Anaerobic c4-dicarboxylate membrane transporter C3496_07900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3496_07900 PF00672 HAMP domain C3496_07905 PF01910 Thiamine-binding protein C3496_07910 PF00528 Binding-protein-dependent transport system inner membrane component C3496_07920 PF00005 ABC transporter C3496_07925 PF12848 ABC transporter C3496_07925 PF00005 ABC transporter C3496_07930 PF00704 Glycosyl hydrolases family 18 C3496_07930 PF00041 Fibronectin type III domain C3496_07950 PF08360 QacR-like protein, C-terminal region C3496_07950 PF00440 Bacterial regulatory proteins, tetR family C3496_07970 PF11700 Vacuole effluxer Atg22 like C3496_07985 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C3496_07985 PF09180 Prolyl-tRNA synthetase, C-terminal C3496_07985 PF03129 Anticodon binding domain C3496_07995 PF05036 Sporulation related domain C3496_07995 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase C3496_07995 PF08239 Bacterial SH3 domain C3496_08000 PF00480 ROK family C3496_08005 PF02342 TerD domain C3496_08010 PF02342 TerD domain C3496_08015 PF02342 TerD domain C3496_08020 PF03741 Integral membrane protein TerC family C3496_08025 PF14266 Putative component of 'biosynthetic module' C3496_08030 PF05816 Toxic anion resistance protein (TelA) C3496_08035 PF00689 Cation transporting ATPase, C-terminus C3496_08035 PF00690 Cation transporter/ATPase, N-terminus C3496_08040 PF06569 Protein of unknown function (DUF1128) C3496_08045 PF01451 Low molecular weight phosphotyrosine protein phosphatase C3496_08055 PF03631 Virulence factor BrkB C3496_08070 PF00892 EamA-like transporter family C3496_08080 PF10502 Signal peptidase, peptidase S26 C3496_08090 PF09335 SNARE associated Golgi protein C3496_08105 PF16242 Pyridoxamine 5'-phosphate oxidase like C3496_08110 PF01699 Sodium/calcium exchanger protein C3496_08115 PF14167 YfkD-like protein C3496_08120 PF04055 Radical SAM superfamily C3496_08120 PF08756 YfkB-like domain C3496_08130 PF05681 Fumarate hydratase (Fumerase) C3496_08130 PF05683 Fumarase C-terminus C3496_08135 PF01522 Polysaccharide deacetylase C3496_08140 PF00730 HhH-GPD superfamily base excision DNA repair protein C3496_08145 PF01938 TRAM domain C3496_08145 PF05958 tRNA (Uracil-5-)-methyltransferase C3496_08150 PF01416 tRNA pseudouridine synthase C3496_08160 PF13426 PAS domain C3496_08160 PF02954 Bacterial regulatory protein, Fis family C3496_08160 PF00158 Sigma-54 interaction domain C3496_08170 PF00324 Amino acid permease C3496_08175 PF07687 Peptidase dimerisation domain C3496_08175 PF01546 Peptidase family M20/M25/M40 C3496_08205 PF04960 Glutaminase C3496_08215 PF02378 Phosphotransferase system, EIIC C3496_08215 PF00367 phosphotransferase system, EIIB C3496_08220 PF00144 Beta-lactamase C3496_08240 PF00535 Glycosyl transferase family 2 C3496_08245 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C3496_08245 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C3496_08245 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C3496_08250 PF01370 NAD dependent epimerase/dehydratase family C3496_08250 PF02911 Formyl transferase, C-terminal domain C3496_08250 PF00551 Formyl transferase C3496_08255 PF00535 Glycosyl transferase family 2 C3496_08260 PF02901 Pyruvate formate lyase-like C3496_08260 PF01228 Glycine radical C3496_08265 PF04055 Radical SAM superfamily C3496_08270 PF04101 Glycosyltransferase family 28 C-terminal domain C3496_08270 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase C3496_08285 PF01979 Amidohydrolase family C3496_08290 PF08338 Domain of unknown function (DUF1731) C3496_08290 PF01370 NAD dependent epimerase/dehydratase family C3496_08295 PF02631 RecX family C3496_08310 PF08176 Small acid-soluble spore protein K family C3496_08315 PF14043 WVELL protein C3496_08320 PF04307 LexA-binding, inner membrane-associated putative hydrolase C3496_08325 PF14815 NUDIX domain C3496_08325 PF00730 HhH-GPD superfamily base excision DNA repair protein C3496_08335 PF04259 Small, acid-soluble spore protein, gamma-type C3496_08340 PF14182 YgaB-like protein C3496_08345 PF04167 Protein of unknown function (DUF402) C3496_08350 PF00664 ABC transporter transmembrane region C3496_08350 PF00005 ABC transporter C3496_08355 PF06081 Aromatic acid exporter family member 1 C3496_08360 PF00310 Glutamine amidotransferases class-II C3496_08360 PF04898 Glutamate synthase central domain C3496_08360 PF01645 Conserved region in glutamate synthase C3496_08360 PF01493 GXGXG motif C3496_08365 PF00202 Aminotransferase class-III C3496_08370 PF00005 ABC transporter C3496_08385 PF07885 Ion channel C3496_08390 PF00578 AhpC/TSA family C3496_08395 PF01475 Ferric uptake regulator family C3496_08400 PF11023 Zinc-ribbon containing domain C3496_08505 PF01709 Transcriptional regulator C3496_08510 PF00293 NUDIX domain C3496_08510 PF13344 Haloacid dehalogenase-like hydrolase C3496_08515 PF00905 Penicillin binding protein transpeptidase domain C3496_08515 PF00912 Transglycosylase C3496_08520 PF13462 Thioredoxin C3496_08530 PF08331 Domain of unknown function (DUF1730) C3496_08535 PF12671 Putative amidase domain C3496_08540 PF00588 SpoU rRNA Methylase family C3496_08545 PF00563 EAL domain C3496_08545 PF00990 Diguanylate cyclase, GGDEF domain C3496_08545 PF03707 Bacterial signalling protein N terminal repeat C3496_08555 PF08298 PrkA AAA domain C3496_08555 PF06798 PrkA serine protein kinase C-terminal domain C3496_08570 PF04285 Protein of unknown function (DUF444) C3496_08585 PF02028 BCCT, betaine/carnitine/choline family transporter C3496_08590 PF18496 Collagenase G catalytic helper subdomain C3496_08590 PF01752 Collagenase C3496_08590 PF08453 Peptidase family M9 N-terminal C3496_08600 PF01145 SPFH domain / Band 7 family C3496_08600 PF15975 Flotillin C3496_08605 PF02743 Cache domain C3496_08605 PF00672 HAMP domain C3496_08605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3496_08610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_08610 PF00989 PAS fold C3496_08610 PF17203 Single cache domain 3 C3496_08610 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain C3496_08615 PF00072 Response regulator receiver domain C3496_08615 PF12431 Transcriptional regulator C3496_08620 PF03600 Citrate transporter C3496_08650 PF04309 Glycerol-3-phosphate responsive antiterminator C3496_08655 PF17912 MalK OB fold domain C3496_08655 PF00005 ABC transporter C3496_08660 PF00528 Binding-protein-dependent transport system inner membrane component C3496_08665 PF00528 Binding-protein-dependent transport system inner membrane component C3496_08670 PF13416 Bacterial extracellular solute-binding protein C3496_08675 PF00149 Calcineurin-like phosphoesterase C3496_08680 PF00072 Response regulator receiver domain C3496_08680 PF00486 Transcriptional regulatory protein, C terminal C3496_08685 PF00512 His Kinase A (phospho-acceptor) domain C3496_08685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_08695 PF13529 Peptidase_C39 like family C3496_08700 PF02743 Cache domain C3496_08700 PF00672 HAMP domain C3496_08700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3496_08705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_08705 PF00989 PAS fold C3496_08705 PF17203 Single cache domain 3 C3496_08705 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain C3496_08710 PF00072 Response regulator receiver domain C3496_08715 PF03390 2-hydroxycarboxylate transporter family C3496_08720 PF00390 Malic enzyme, N-terminal domain C3496_08720 PF03949 Malic enzyme, NAD binding domain C3496_08730 PF00892 EamA-like transporter family C3496_08735 PF00155 Aminotransferase class I and II C3496_08735 PF00392 Bacterial regulatory proteins, gntR family C3496_08745 PF00672 HAMP domain C3496_08745 PF00512 His Kinase A (phospho-acceptor) domain C3496_08745 PF18698 Histidine kinase sensor domain C3496_08745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_08745 PF00989 PAS fold C3496_08750 PF00072 Response regulator receiver domain C3496_08750 PF00486 Transcriptional regulatory protein, C terminal C3496_08760 PF00583 Acetyltransferase (GNAT) family C3496_08760 PF13508 Acetyltransferase (GNAT) domain C3496_08765 PF02634 FdhD/NarQ family C3496_08770 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C3496_08770 PF01568 Molydopterin dinucleotide binding domain C3496_08770 PF00384 Molybdopterin oxidoreductase C3496_08770 PF00037 4Fe-4S binding domain C3496_08770 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C3496_08775 PF07849 Protein of unknown function (DUF1641) C3496_08785 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C3496_08785 PF05222 Alanine dehydrogenase/PNT, N-terminal domain C3496_08790 PF13520 Amino acid permease C3496_08800 PF01022 Bacterial regulatory protein, arsR family C3496_08805 PF00403 Heavy-metal-associated domain C3496_08810 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family C3496_08810 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain C3496_08810 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain C3496_08820 PF07504 Fungalysin/Thermolysin Propeptide Motif C3496_08820 PF03413 Peptidase propeptide and YPEB domain C3496_08820 PF01447 Thermolysin metallopeptidase, catalytic domain C3496_08820 PF02868 Thermolysin metallopeptidase, alpha-helical domain C3496_08840 PF04294 VanW like protein C3496_08845 PF03816 Cell envelope-related transcriptional attenuator domain C3496_08850 PF01773 Na+ dependent nucleoside transporter N-terminus C3496_08850 PF07662 Na+ dependent nucleoside transporter C-terminus C3496_08855 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C3496_08860 PF00571 CBS domain C3496_08860 PF03471 Transporter associated domain C3496_08860 PF01595 Cyclin M transmembrane N-terminal domain C3496_08865 PF00206 Lyase C3496_08865 PF10415 Fumarase C C-terminus C3496_08870 PF02652 L-lactate permease C3496_08875 PF01022 Bacterial regulatory protein, arsR family C3496_08880 PF08141 Small acid-soluble spore protein H family C3496_08885 PF00854 POT family C3496_08890 PF01497 Periplasmic binding protein C3496_08895 PF01032 FecCD transport family C3496_08900 PF01032 FecCD transport family C3496_08905 PF00005 ABC transporter C3496_08910 PF08241 Methyltransferase domain C3496_08915 PF00155 Aminotransferase class I and II C3496_08920 PF01370 NAD dependent epimerase/dehydratase family C3496_08925 PF00156 Phosphoribosyl transferase domain C3496_08930 PF13344 Haloacid dehalogenase-like hydrolase C3496_08930 PF00293 NUDIX domain C3496_08935 PF00092 von Willebrand factor type A domain C3496_08940 PF07728 AAA domain (dynein-related subfamily) C3496_08945 PF13091 PLD-like domain C3496_08945 PF13396 Phospholipase_D-nuclease N-terminal C3496_08960 PF00990 Diguanylate cyclase, GGDEF domain C3496_08960 PF03707 Bacterial signalling protein N terminal repeat C3496_08960 PF00563 EAL domain C3496_08965 PF13520 Amino acid permease C3496_08970 PF00392 Bacterial regulatory proteins, gntR family C3496_08970 PF07702 UTRA domain C3496_08975 PF02378 Phosphotransferase system, EIIC C3496_08975 PF00367 phosphotransferase system, EIIB C3496_08980 PF16657 Maltogenic Amylase, C-terminal domain C3496_08980 PF00128 Alpha amylase, catalytic domain C3496_08995 PF03323 Bacillus/Clostridium GerA spore germination protein C3496_09005 PF01636 Phosphotransferase enzyme family C3496_09010 PF01235 Sodium:alanine symporter family C3496_09020 PF00005 ABC transporter C3496_09025 PF00497 Bacterial extracellular solute-binding proteins, family 3 C3496_09030 PF00528 Binding-protein-dependent transport system inner membrane component C3496_09035 PF00528 Binding-protein-dependent transport system inner membrane component C3496_09040 PF00324 Amino acid permease C3496_09065 PF08279 HTH domain C3496_09065 PF13280 WYL domain C3496_09070 PF01872 RibD C-terminal domain C3496_09075 PF00512 His Kinase A (phospho-acceptor) domain C3496_09075 PF00989 PAS fold C3496_09075 PF18698 Histidine kinase sensor domain C3496_09075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_09075 PF00672 HAMP domain C3496_09080 PF00486 Transcriptional regulatory protein, C terminal C3496_09080 PF00072 Response regulator receiver domain C3496_09090 PF01740 STAS domain C3496_09090 PF00916 Sulfate permease family C3496_09095 PF00582 Universal stress protein family C3496_09105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C3496_09110 PF00528 Binding-protein-dependent transport system inner membrane component C3496_09115 PF00528 Binding-protein-dependent transport system inner membrane component C3496_09120 PF00005 ABC transporter C3496_09120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C3496_09125 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C3496_09125 PF00005 ABC transporter C3496_09130 PF07690 Major Facilitator Superfamily C3496_09135 PF01047 MarR family C3496_09140 PF07690 Major Facilitator Superfamily C3496_09145 PF00356 Bacterial regulatory proteins, lacI family C3496_09150 PF00294 pfkB family carbohydrate kinase C3496_09155 PF05025 RbsD / FucU transport protein family C3496_09160 PF00005 ABC transporter C3496_09165 PF02653 Branched-chain amino acid transport system / permease component C3496_09170 PF13407 Periplasmic binding protein domain C3496_09175 PF00923 Transaldolase/Fructose-6-phosphate aldolase C3496_09180 PF05547 Immune inhibitor A peptidase M6 C3496_09185 PF01520 N-acetylmuramoyl-L-alanine amidase C3496_09185 PF05036 Sporulation related domain C3496_09195 PF00107 Zinc-binding dehydrogenase C3496_09195 PF08240 Alcohol dehydrogenase GroES-like domain C3496_09205 PF00882 Zinc dependent phospholipase C C3496_09210 PF03372 Endonuclease/Exonuclease/phosphatase family C3496_09235 PF02673 Bacitracin resistance protein BacA C3496_09240 PF00672 HAMP domain C3496_09240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3496_09240 PF02743 Cache domain C3496_09245 PF06725 3D domain C3496_09245 PF01476 LysM domain C3496_09250 PF01381 Helix-turn-helix C3496_09260 PF04203 Sortase domain C3496_09265 PF00854 POT family C3496_09270 PF05525 Branched-chain amino acid transport protein C3496_09285 PF00324 Amino acid permease C3496_09290 PF00860 Permease family C3496_09305 PF13673 Acetyltransferase (GNAT) domain C3496_09315 PF00999 Sodium/hydrogen exchanger family C3496_09315 PF02080 TrkA-C domain C3496_09315 PF02254 TrkA-N domain C3496_09325 PF00510 Cytochrome c oxidase subunit III C3496_09330 PF00115 Cytochrome C and Quinol oxidase polypeptide I C3496_09335 PF02790 Cytochrome C oxidase subunit II, transmembrane domain C3496_09340 PF00324 Amino acid permease C3496_09345 PF13529 Peptidase_C39 like family C3496_09350 PF01546 Peptidase family M20/M25/M40 C3496_09350 PF07687 Peptidase dimerisation domain C3496_09355 PF11755 Protein of unknown function (DUF3311) C3496_09360 PF00474 Sodium:solute symporter family C3496_09365 PF03323 Bacillus/Clostridium GerA spore germination protein C3496_09370 PF03845 Spore germination protein C3496_09375 PF05504 Spore germination B3/ GerAC like, C-terminal C3496_09385 PF07664 Ferrous iron transport protein B C terminus C3496_09385 PF17910 FeoB cytosolic helical domain C3496_09385 PF07670 Nucleoside recognition C3496_09385 PF02421 Ferrous iron transport protein B C3496_09390 PF07664 Ferrous iron transport protein B C terminus C3496_09390 PF07670 Nucleoside recognition C3496_09390 PF02421 Ferrous iron transport protein B C3496_09390 PF17910 FeoB cytosolic helical domain C3496_09395 PF04023 FeoA domain C3496_09395 PF07664 Ferrous iron transport protein B C terminus C3496_09395 PF17910 FeoB cytosolic helical domain C3496_09395 PF02421 Ferrous iron transport protein B C3496_09395 PF07670 Nucleoside recognition C3496_09400 PF12849 PBP superfamily domain C3496_09405 PF00528 Binding-protein-dependent transport system inner membrane component C3496_09410 PF00528 Binding-protein-dependent transport system inner membrane component C3496_09420 PF00873 AcrB/AcrD/AcrF family C3496_09540 PF00571 CBS domain C3496_09560 PF00246 Zinc carboxypeptidase C3496_09560 PF08239 Bacterial SH3 domain C3496_09565 PF03070 TENA/THI-4/PQQC family C3496_09570 PF00005 ABC transporter C3496_09575 PF00528 Binding-protein-dependent transport system inner membrane component C3496_09580 PF09084 NMT1/THI5 like C3496_09585 PF02581 Thiamine monophosphate synthase C3496_09590 PF01266 FAD dependent oxidoreductase C3496_09595 PF02597 ThiS family C3496_09600 PF05690 Thiazole biosynthesis protein ThiG C3496_09605 PF00899 ThiF family C3496_09610 PF08543 Phosphomethylpyrimidine kinase C3496_09640 PF03814 Potassium-transporting ATPase A subunit C3496_09650 PF02669 K+-transporting ATPase, c chain C3496_09655 PF02702 Osmosensitive K+ channel His kinase sensor domain C3496_09660 PF07690 Major Facilitator Superfamily C3496_09665 PF01047 MarR family C3496_09680 PF00860 Permease family C3496_09690 PF17969 L,D-transpeptidase C-terminal domain C3496_09690 PF03734 L,D-transpeptidase catalytic domain C3496_09705 PF00085 Thioredoxin C3496_09710 PF02600 Disulfide bond formation protein DsbB C3496_09715 PF14148 YhdB-like protein C3496_09725 PF03845 Spore germination protein C3496_09735 PF03323 Bacillus/Clostridium GerA spore germination protein C3496_09745 PF00881 Nitroreductase family C3496_09750 PF04293 SpoVR like protein C3496_09760 PF01614 Bacterial transcriptional regulator C3496_09760 PF09339 IclR helix-turn-helix domain C3496_09780 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C3496_09780 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3496_09785 PF02583 Metal-sensitive transcriptional repressor C3496_09790 PF00581 Rhodanese-like domain C3496_09790 PF01206 Sulfurtransferase TusA C3496_09795 PF00581 Rhodanese-like domain C3496_09795 PF00753 Metallo-beta-lactamase superfamily C3496_09800 PF01206 Sulfurtransferase TusA C3496_09805 PF01206 Sulfurtransferase TusA C3496_09815 PF01206 Sulfurtransferase TusA C3496_09815 PF00581 Rhodanese-like domain C3496_09825 PF13686 DsrE/DsrF/DrsH-like family C3496_09830 PF01925 Sulfite exporter TauE/SafE C3496_09840 PF03816 Cell envelope-related transcriptional attenuator domain C3496_09845 PF00107 Zinc-binding dehydrogenase C3496_09845 PF08240 Alcohol dehydrogenase GroES-like domain C3496_09855 PF07690 Major Facilitator Superfamily C3496_09865 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C3496_09865 PF05043 Mga helix-turn-helix domain C3496_09865 PF08279 HTH domain C3496_09865 PF00874 PRD domain C3496_09870 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit C3496_09875 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C3496_09880 PF02378 Phosphotransferase system, EIIC C3496_09895 PF06725 3D domain C3496_09895 PF01476 LysM domain C3496_09900 PF02687 FtsX-like permease family C3496_09900 PF12704 MacB-like periplasmic core domain C3496_09905 PF00005 ABC transporter C3496_09915 PF09529 Integral membrane protein (intg_mem_TP0381) C3496_09930 PF02687 FtsX-like permease family C3496_09935 PF05525 Branched-chain amino acid transport protein C3496_09940 PF05067 Manganese containing catalase C3496_09945 PF12652 CotJB protein C3496_09950 PF11007 Spore coat associated protein JA (CotJA) C3496_09965 PF02735 Ku70/Ku80 beta-barrel domain C3496_09975 PF09335 SNARE associated Golgi protein C3496_10010 PF13520 Amino acid permease C3496_10015 PF00999 Sodium/hydrogen exchanger family C3496_10025 PF01418 Helix-turn-helix domain, rpiR family C3496_10025 PF01380 SIS domain C3496_10030 PF13580 SIS domain C3496_10035 PF02378 Phosphotransferase system, EIIC C3496_10035 PF00367 phosphotransferase system, EIIB C3496_10045 PF07681 DoxX C3496_10060 PF00892 EamA-like transporter family C3496_10065 PF01037 Lrp/AsnC ligand binding domain C3496_10075 PF00893 Small Multidrug Resistance protein C3496_10080 PF00893 Small Multidrug Resistance protein C3496_10085 PF00440 Bacterial regulatory proteins, tetR family C3496_10085 PF17934 Tetracyclin repressor-like, C-terminal domain C3496_10090 PF07690 Major Facilitator Superfamily C3496_10095 PF01638 HxlR-like helix-turn-helix C3496_10105 PF02525 Flavodoxin-like fold C3496_10110 PF12793 Sugar transport-related sRNA regulator N-term C3496_10110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C3496_10115 PF07690 Major Facilitator Superfamily C3496_10125 PF01965 DJ-1/PfpI family C3496_10130 PF18011 C-terminal domain found in long catalases C3496_10130 PF06628 Catalase-related immune-responsive C3496_10130 PF00199 Catalase C3496_10140 PF13520 Amino acid permease C3496_10145 PF01177 Asp/Glu/Hydantoin racemase C3496_10155 PF00171 Aldehyde dehydrogenase family C3496_10175 PF00664 ABC transporter transmembrane region C3496_10175 PF00005 ABC transporter C3496_10180 PF00664 ABC transporter transmembrane region C3496_10180 PF00005 ABC transporter C3496_10190 PF00497 Bacterial extracellular solute-binding proteins, family 3 C3496_10195 PF00528 Binding-protein-dependent transport system inner membrane component C3496_10200 PF00005 ABC transporter C3496_10205 PF00269 Small, acid-soluble spore proteins, alpha/beta type C3496_10215 PF14398 YheC/D like ATP-grasp C3496_10225 PF04286 Protein of unknown function (DUF445) C3496_10230 PF06133 Control of competence regulator ComK, YlbF/YmcA C3496_10245 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C3496_10245 PF00205 Thiamine pyrophosphate enzyme, central domain C3496_10245 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C3496_10250 PF03306 Alpha-acetolactate decarboxylase C3496_10260 PF02245 Methylpurine-DNA glycosylase (MPG) C3496_10285 PF04055 Radical SAM superfamily C3496_10290 PF00501 AMP-binding enzyme C3496_10290 PF13193 AMP-binding enzyme C-terminal domain C3496_10305 PF01740 STAS domain C3496_10305 PF00916 Sulfate permease family C3496_10315 PF00378 Enoyl-CoA hydratase/isomerase C3496_10330 PF05343 M42 glutamyl aminopeptidase C3496_10345 PF11121 Protein of unknown function (DUF2639) C3496_10350 PF05544 Proline racemase C3496_10355 PF02423 Ornithine cyclodeaminase/mu-crystallin family C3496_10370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C3496_10375 PF00528 Binding-protein-dependent transport system inner membrane component C3496_10380 PF00528 Binding-protein-dependent transport system inner membrane component C3496_10380 PF12911 N-terminal TM domain of oligopeptide transport permease C C3496_10385 PF00005 ABC transporter C3496_10385 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C3496_10390 PF00005 ABC transporter C3496_10390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C3496_10400 PF00083 Sugar (and other) transporter C3496_10405 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain C3496_10405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_10410 PF12431 Transcriptional regulator C3496_10410 PF00072 Response regulator receiver domain C3496_10410 PF08279 HTH domain C3496_10415 PF03401 Tripartite tricarboxylate transporter family receptor C3496_10500 PF02384 N-6 DNA Methylase C3496_10510 PF18766 SWI2/SNF2 ATPase C3496_10510 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) C3496_10510 PF11867 Domain of unknown function (DUF3387) C3496_10525 PF13411 MerR HTH family regulatory protein C3496_10525 PF06445 GyrI-like small molecule binding domain C3496_10540 PF00772 DnaB-like helicase N terminal domain C3496_10540 PF03796 DnaB-like helicase C terminal domain C3496_10550 PF01925 Sulfite exporter TauE/SafE C3496_10565 PF07690 Major Facilitator Superfamily C3496_10620 PF00550 Phosphopantetheine attachment site C3496_10620 PF07993 Male sterility protein C3496_10625 PF00440 Bacterial regulatory proteins, tetR family C3496_10625 PF18665 Tetracyclin repressor-like, C-terminal domain C3496_10635 PF03123 CAT RNA binding domain C3496_10635 PF00874 PRD domain C3496_10640 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C3496_10640 PF02378 Phosphotransferase system, EIIC C3496_10640 PF00367 phosphotransferase system, EIIB C3496_10645 PF00232 Glycosyl hydrolase family 1 C3496_10655 PF01066 CDP-alcohol phosphatidyltransferase C3496_10700 PF02733 Dak1 domain C3496_10715 PF02733 Dak1 domain C3496_10765 PF01966 HD domain C3496_10765 PF00072 Response regulator receiver domain C3496_10825 PF11181 Heat induced stress protein YflT C3496_10830 PF05532 CsbD-like C3496_10845 PF01740 STAS domain C3496_10850 PF13581 Histidine kinase-like ATPase domain C3496_10855 PF04539 Sigma-70 region 3 C3496_10855 PF04545 Sigma-70, region 4 C3496_10855 PF04542 Sigma-70 region 2 C3496_10865 PF07228 Stage II sporulation protein E (SpoIIE) C3496_10865 PF13426 PAS domain C3496_10870 PF01739 CheR methyltransferase, SAM binding domain C3496_10870 PF03705 CheR methyltransferase, all-alpha domain C3496_10875 PF00512 His Kinase A (phospho-acceptor) domain C3496_10875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_10875 PF00072 Response regulator receiver domain C3496_10875 PF01627 Hpt domain C3496_10900 PF01906 Putative heavy-metal-binding C3496_10910 PF12323 Helix-turn-helix domain C3496_10910 PF01385 Probable transposase C3496_10910 PF07282 Putative transposase DNA-binding domain C3496_10925 PF07730 Histidine kinase C3496_10925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_10930 PF00072 Response regulator receiver domain C3496_10930 PF00196 Bacterial regulatory proteins, luxR family C3496_10945 PF11121 Protein of unknown function (DUF2639) C3496_10960 PF00149 Calcineurin-like phosphoesterase C3496_10965 PF13514 AAA domain C3496_10970 PF01966 HD domain C3496_10970 PF01336 OB-fold nucleic acid binding domain C3496_11000 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C3496_11005 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C3496_11010 PF18801 response regulator aspartate phosphatase H, N terminal C3496_11020 PF08386 TAP-like protein C3496_11020 PF00561 alpha/beta hydrolase fold C3496_11050 PF04309 Glycerol-3-phosphate responsive antiterminator C3496_11055 PF00230 Major intrinsic protein C3496_11060 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C3496_11060 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C3496_11065 PF01266 FAD dependent oxidoreductase C3496_11065 PF16901 C-terminal domain of alpha-glycerophosphate oxidase C3496_11075 PF04542 Sigma-70 region 2 C3496_11075 PF08281 Sigma-70, region 4 C3496_11085 PF01098 Cell cycle protein C3496_11100 PF07690 Major Facilitator Superfamily C3496_11105 PF07690 Major Facilitator Superfamily C3496_11115 PF13538 UvrD-like helicase C-terminal domain C3496_11140 PF01047 MarR family C3496_11145 PF12732 YtxH-like protein C3496_11150 PF01230 HIT domain C3496_11160 PF00005 ABC transporter C3496_11165 PF05975 Bacterial ABC transporter protein EcsB C3496_11170 PF12787 EcsC protein family C3496_11245 PF17934 Tetracyclin repressor-like, C-terminal domain C3496_11245 PF00440 Bacterial regulatory proteins, tetR family C3496_11255 PF03703 Bacterial PH domain C3496_11260 PF03703 Bacterial PH domain C3496_11280 PF03703 Bacterial PH domain C3496_11285 PF03703 Bacterial PH domain C3496_11290 PF03992 Antibiotic biosynthesis monooxygenase C3496_11295 PF00905 Penicillin binding protein transpeptidase domain C3496_11295 PF00912 Transglycosylase C3496_11300 PF01208 Uroporphyrinogen decarboxylase (URO-D) C3496_11305 PF00762 Ferrochelatase C3496_11310 PF01593 Flavin containing amine oxidoreductase C3496_11335 PF03965 Penicillinase repressor C3496_11345 PF00440 Bacterial regulatory proteins, tetR family C3496_11345 PF17932 Tetracyclin repressor-like, C-terminal domain C3496_11365 PF13302 Acetyltransferase (GNAT) domain C3496_11375 PF13280 WYL domain C3496_11375 PF08279 HTH domain C3496_11385 PF00356 Bacterial regulatory proteins, lacI family C3496_11390 PF14149 YhfH-like protein C3496_11395 PF12706 Beta-lactamase superfamily domain C3496_11400 PF03099 Biotin/lipoate A/B protein ligase family C3496_11400 PF10437 Bacterial lipoate protein ligase C-terminus C3496_11410 PF13193 AMP-binding enzyme C-terminal domain C3496_11410 PF00501 AMP-binding enzyme C3496_11425 PF07968 Leukocidin/Hemolysin toxin family C3496_11430 PF00149 Calcineurin-like phosphoesterase C3496_11440 PF01966 HD domain C3496_11445 PF01638 HxlR-like helix-turn-helix C3496_11450 PF07690 Major Facilitator Superfamily C3496_11460 PF08281 Sigma-70, region 4 C3496_11460 PF04542 Sigma-70 region 2 C3496_11470 PF12833 Helix-turn-helix domain C3496_11470 PF06445 GyrI-like small molecule binding domain C3496_11485 PF00512 His Kinase A (phospho-acceptor) domain C3496_11485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_11490 PF00072 Response regulator receiver domain C3496_11490 PF00486 Transcriptional regulatory protein, C terminal C3496_11515 PF01435 Peptidase family M48 C3496_11515 PF16491 CAAX prenyl protease N-terminal, five membrane helices C3496_11520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3496_11520 PF02743 Cache domain C3496_11520 PF00672 HAMP domain C3496_11525 PF00892 EamA-like transporter family C3496_11535 PF01274 Malate synthase C3496_11540 PF00463 Isocitrate lyase family C3496_11555 PF00313 'Cold-shock' DNA-binding domain C3496_11570 PF06338 ComK protein C3496_11575 PF09335 SNARE associated Golgi protein C3496_11580 PF10502 Signal peptidase, peptidase S26 C3496_11585 PF13361 UvrD-like helicase C-terminal domain C3496_11585 PF12705 PD-(D/E)XK nuclease superfamily C3496_11590 PF00580 UvrD/REP helicase N-terminal domain C3496_11590 PF13361 UvrD-like helicase C-terminal domain C3496_11590 PF12705 PD-(D/E)XK nuclease superfamily C3496_11600 PF10676 Spore germination protein gerPA/gerPF C3496_11605 PF10970 Spore germination protein GerPE C3496_11615 PF10737 Spore germination protein GerPC C3496_11620 PF10803 Spore germination GerPB C3496_11625 PF10676 Spore germination protein gerPA/gerPF C3496_11630 PF09388 Spo0E like sporulation regulatory protein C3496_11635 PF01557 Fumarylacetoacetate (FAA) hydrolase family C3496_11645 PF00202 Aminotransferase class-III C3496_11650 PF07457 Protein of unknown function (DUF1516) C3496_11660 PF00733 Asparagine synthase C3496_11660 PF13537 Glutamine amidotransferase domain C3496_11665 PF00762 Ferrochelatase C3496_11670 PF06628 Catalase-related immune-responsive C3496_11670 PF00199 Catalase C3496_11675 PF00909 Ammonium Transporter Family C3496_11685 PF00128 Alpha amylase, catalytic domain C3496_11695 PF04461 Protein of unknown function (DUF520) C3496_11700 PF13509 S1 domain C3496_11700 PF17783 CvfB-like winged helix domain C3496_11705 PF00639 PPIC-type PPIASE domain C3496_11715 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) C3496_11715 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 C3496_11720 PF12758 Protein of unknown function (DUF3813) C3496_11740 PF14168 YjzC-like protein C3496_11745 PF00004 ATPase family associated with various cellular activities (AAA) C3496_11745 PF10431 C-terminal, D2-small domain, of ClpB protein C3496_11745 PF02861 Clp amino terminal domain, pathogenicity island component C3496_11745 PF17871 AAA lid domain C3496_11745 PF07724 AAA domain (Cdc48 subfamily) C3496_11765 PF10815 ComZ C3496_11775 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C3496_11775 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C3496_11780 PF02801 Beta-ketoacyl synthase, C-terminal domain C3496_11780 PF00109 Beta-ketoacyl synthase, N-terminal domain C3496_11785 PF10026 Predicted Zn-dependent protease (DUF2268) C3496_11790 PF12227 Protein of unknown function (DUF3603) C3496_11800 PF00579 tRNA synthetases class I (W and Y) C3496_11815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C3496_11820 PF00528 Binding-protein-dependent transport system inner membrane component C3496_11825 PF00528 Binding-protein-dependent transport system inner membrane component C3496_11825 PF12911 N-terminal TM domain of oligopeptide transport permease C C3496_11830 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C3496_11830 PF00005 ABC transporter C3496_11835 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C3496_11835 PF00005 ABC transporter C3496_11840 PF01554 MatE C3496_11845 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C3496_11860 PF03960 ArsC family C3496_11865 PF03741 Integral membrane protein TerC family C3496_11870 PF05389 Negative regulator of genetic competence (MecA) C3496_11875 PF13091 PLD-like domain C3496_11875 PF13396 Phospholipase_D-nuclease N-terminal C3496_11885 PF08439 Oligopeptidase F C3496_11885 PF01432 Peptidase family M3 C3496_11900 PF01152 Bacterial-like globin C3496_11905 PF01928 CYTH domain C3496_11915 PF04607 Region found in RelA / SpoT proteins C3496_11920 PF01513 ATP-NAD kinase C3496_11925 PF00849 RNA pseudouridylate synthase C3496_11935 PF00149 Calcineurin-like phosphoesterase C3496_11940 PF01098 Cell cycle protein C3496_11945 PF00535 Glycosyl transferase family 2 C3496_11950 PF08241 Methyltransferase domain C3496_11955 PF05711 Macrocin-O-methyltransferase (TylF) C3496_11965 PF13181 Tetratricopeptide repeat C3496_11965 PF00535 Glycosyl transferase family 2 C3496_11985 PF00483 Nucleotidyl transferase C3496_11990 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase C3496_11995 PF16363 GDP-mannose 4,6 dehydratase C3496_12000 PF04321 RmlD substrate binding domain C3496_12020 PF07098 Protein of unknown function (DUF1360) C3496_12040 PF00580 UvrD/REP helicase N-terminal domain C3496_12040 PF13361 UvrD-like helicase C-terminal domain C3496_12045 PF13673 Acetyltransferase (GNAT) domain C3496_12055 PF00756 Putative esterase C3496_12070 PF02368 Bacterial Ig-like domain (group 2) C3496_12075 PF00474 Sodium:solute symporter family C3496_12085 PF04715 Anthranilate synthase component I, N terminal region C3496_12085 PF00425 chorismate binding enzyme C3496_12090 PF00117 Glutamine amidotransferase class-I C3496_12090 PF00591 Glycosyl transferase family, a/b domain C3496_12090 PF02885 Glycosyl transferase family, helical bundle domain C3496_12095 PF02885 Glycosyl transferase family, helical bundle domain C3496_12095 PF00591 Glycosyl transferase family, a/b domain C3496_12100 PF00218 Indole-3-glycerol phosphate synthase C3496_12105 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase C3496_12110 PF00291 Pyridoxal-phosphate dependent enzyme C3496_12115 PF00290 Tryptophan synthase alpha chain C3496_12125 PF02652 L-lactate permease C3496_12130 PF10042 Uncharacterized conserved protein (DUF2278) C3496_12160 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C3496_12160 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3496_12195 PF00364 Biotin-requiring enzyme C3496_12195 PF02817 e3 binding domain C3496_12195 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C3496_12200 PF16870 2-oxoglutarate dehydrogenase C-terminal C3496_12200 PF00676 Dehydrogenase E1 component C3496_12200 PF02779 Transketolase, pyrimidine binding domain C3496_12205 PF01381 Helix-turn-helix C3496_12335 PF00589 Phage integrase family C3496_12335 PF02899 Phage integrase, N-terminal SAM-like domain C3496_12345 PF13649 Methyltransferase domain C3496_12360 PF00768 D-alanyl-D-alanine carboxypeptidase C3496_12360 PF07943 Penicillin-binding protein 5, C-terminal domain C3496_12370 PF12389 Camelysin metallo-endopeptidase C3496_12380 PF12389 Camelysin metallo-endopeptidase C3496_12385 PF08671 Anti-repressor SinI C3496_12385 PF01381 Helix-turn-helix C3496_12395 PF05547 Immune inhibitor A peptidase M6 C3496_12400 PF00171 Aldehyde dehydrogenase family C3496_12405 PF00005 ABC transporter C3496_12405 PF08402 TOBE domain C3496_12410 PF00528 Binding-protein-dependent transport system inner membrane component C3496_12415 PF00528 Binding-protein-dependent transport system inner membrane component C3496_12420 PF13416 Bacterial extracellular solute-binding protein C3496_12430 PF03176 MMPL family C3496_12440 PF00849 RNA pseudouridylate synthase C3496_12440 PF01479 S4 domain C3496_12450 PF00188 Cysteine-rich secretory protein family C3496_12455 PF13183 4Fe-4S dicluster domain C3496_12455 PF02754 Cysteine-rich domain C3496_12460 PF02913 FAD linked oxidases, C-terminal domain C3496_12460 PF01565 FAD binding domain C3496_12465 PF17853 GGDEF-like domain C3496_12465 PF05651 Putative sugar diacid recognition C3496_12465 PF13556 PucR C-terminal helix-turn-helix domain C3496_12475 PF00486 Transcriptional regulatory protein, C terminal C3496_12475 PF00072 Response regulator receiver domain C3496_12480 PF00512 His Kinase A (phospho-acceptor) domain C3496_12480 PF00672 HAMP domain C3496_12480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_12480 PF18698 Histidine kinase sensor domain C3496_12480 PF00989 PAS fold C3496_12485 PF07729 FCD domain C3496_12485 PF00392 Bacterial regulatory proteins, gntR family C3496_12490 PF02754 Cysteine-rich domain C3496_12495 PF02589 LUD domain C3496_12495 PF13183 4Fe-4S dicluster domain C3496_12495 PF11870 Domain of unknown function (DUF3390) C3496_12500 PF02589 LUD domain C3496_12505 PF01478 Type IV leader peptidase family C3496_12505 PF06750 Bacterial Peptidase A24 N-terminal domain C3496_12515 PF01226 Formate/nitrite transporter C3496_12520 PF03741 Integral membrane protein TerC family C3496_12525 PF02386 Cation transport protein C3496_12530 PF00269 Small, acid-soluble spore proteins, alpha/beta type C3496_12535 PF01575 MaoC like domain C3496_12560 PF00561 alpha/beta hydrolase fold C3496_12570 PF02386 Cation transport protein C3496_12595 PF08402 TOBE domain C3496_12595 PF00005 ABC transporter C3496_12600 PF00528 Binding-protein-dependent transport system inner membrane component C3496_12605 PF13419 Haloacid dehalogenase-like hydrolase C3496_12610 PF00266 Aminotransferase class-V C3496_12620 PF00455 DeoR C terminal sensor domain C3496_12620 PF08220 DeoR-like helix-turn-helix domain C3496_12635 PF00596 Class II Aldolase and Adducin N-terminal domain C3496_12645 PF04748 Divergent polysaccharide deacetylase C3496_12650 PF09388 Spo0E like sporulation regulatory protein C3496_12655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_12655 PF02743 Cache domain C3496_12655 PF00512 His Kinase A (phospho-acceptor) domain C3496_12660 PF01047 MarR family C3496_12670 PF12867 DinB superfamily C3496_12680 PF00512 His Kinase A (phospho-acceptor) domain C3496_12680 PF13188 PAS domain C3496_12680 PF13426 PAS domain C3496_12680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_12680 PF00989 PAS fold C3496_12685 PF06508 Queuosine biosynthesis protein QueC C3496_12690 PF01242 6-pyruvoyl tetrahydropterin synthase C3496_12695 PF04055 Radical SAM superfamily C3496_12700 PF14489 QueF-like protein C3496_12705 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) C3496_12740 PF07972 NrdI Flavodoxin like C3496_12755 PF00268 Ribonucleotide reductase, small chain C3496_12760 PF00392 Bacterial regulatory proteins, gntR family C3496_12765 PF00005 ABC transporter C3496_12775 PF00005 ABC transporter C3496_12785 PF02517 CPBP intramembrane metalloprotease C3496_12795 PF01037 Lrp/AsnC ligand binding domain C3496_12805 PF00857 Isochorismatase family C3496_12815 PF17676 LD-carboxypeptidase C-terminal domain C3496_12815 PF02016 LD-carboxypeptidase N-terminal domain C3496_12820 PF03060 Nitronate monooxygenase C3496_12825 PF04914 DltD protein C3496_12830 PF00550 Phosphopantetheine attachment site C3496_12835 PF03062 MBOAT, membrane-bound O-acyltransferase family C3496_12840 PF00501 AMP-binding enzyme C3496_12840 PF13193 AMP-binding enzyme C-terminal domain C3496_12850 PF07687 Peptidase dimerisation domain C3496_12850 PF01546 Peptidase family M20/M25/M40 C3496_12860 PF00258 Flavodoxin C3496_12875 PF01636 Phosphotransferase enzyme family C3496_12900 PF01554 MatE C3496_12905 PF02673 Bacitracin resistance protein BacA C3496_12920 PF01047 MarR family C3496_12930 PF00375 Sodium:dicarboxylate symporter family C3496_12935 PF02386 Cation transport protein C3496_12945 PF09579 Sporulation protein YtfJ (Spore_YtfJ) C3496_12960 PF03698 Uncharacterised protein family (UPF0180) C3496_12975 PF01063 Amino-transferase class IV C3496_12980 PF00205 Thiamine pyrophosphate enzyme, central domain C3496_12980 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C3496_12980 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C3496_12985 PF10369 Small subunit of acetolactate synthase C3496_12985 PF01842 ACT domain C3496_12990 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain C3496_12990 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain C3496_12995 PF08502 LeuA allosteric (dimerisation) domain C3496_12995 PF00682 HMGL-like C3496_13000 PF00180 Isocitrate/isopropylmalate dehydrogenase C3496_13005 PF00330 Aconitase family (aconitate hydratase) C3496_13010 PF00694 Aconitase C-terminal domain C3496_13015 PF13393 Histidyl-tRNA synthetase C3496_13020 PF01634 ATP phosphoribosyltransferase C3496_13025 PF00815 Histidinol dehydrogenase C3496_13030 PF00475 Imidazoleglycerol-phosphate dehydratase C3496_13035 PF00117 Glutamine amidotransferase class-I C3496_13040 PF00977 Histidine biosynthesis protein C3496_13045 PF00977 Histidine biosynthesis protein C3496_13050 PF01502 Phosphoribosyl-AMP cyclohydrolase C3496_13055 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase C3496_13060 PF02811 PHP domain C3496_13070 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C3496_13070 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C3496_13075 PF01066 CDP-alcohol phosphatidyltransferase C3496_13080 PF00884 Sulfatase C3496_13090 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C3496_13090 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C3496_13100 PF01507 Phosphoadenosine phosphosulfate reductase family C3496_13105 PF01747 ATP-sulfurylase C3496_13105 PF14306 PUA-like domain C3496_13115 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C3496_13115 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C3496_13125 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C3496_13130 PF01903 CbiX C3496_13145 PF00209 Sodium:neurotransmitter symporter family C3496_13155 PF00375 Sodium:dicarboxylate symporter family C3496_13165 PF03553 Na+/H+ antiporter family C3496_13180 PF09922 Cell wall-active antibiotics response 4TMS YvqF C3496_13185 PF07730 Histidine kinase C3496_13185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_13185 PF00672 HAMP domain C3496_13190 PF00196 Bacterial regulatory proteins, luxR family C3496_13190 PF00072 Response regulator receiver domain C3496_13200 PF05525 Branched-chain amino acid transport protein C3496_13210 PF08241 Methyltransferase domain C3496_13225 PF02163 Peptidase family M50 C3496_13235 PF00970 Oxidoreductase FAD-binding domain C3496_13235 PF00175 Oxidoreductase NAD-binding domain C3496_13235 PF00042 Globin C3496_13255 PF01925 Sulfite exporter TauE/SafE C3496_13260 PF01384 Phosphate transporter family C3496_13265 PF01865 Protein of unknown function DUF47 C3496_13270 PF00905 Penicillin binding protein transpeptidase domain C3496_13270 PF00912 Transglycosylase C3496_13285 PF00989 PAS fold C3496_13285 PF00512 His Kinase A (phospho-acceptor) domain C3496_13285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_13290 PF01904 Protein of unknown function DUF72 C3496_13300 PF00589 Phage integrase family C3496_13305 PF16736 Single Cache-like C3496_13305 PF00989 PAS fold C3496_13305 PF00512 His Kinase A (phospho-acceptor) domain C3496_13305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_13310 PF01048 Phosphorylase superfamily C3496_13320 PF09924 Uncharacterised conserved protein (DUF2156) C3496_13320 PF03706 Lysylphosphatidylglycerol synthase TM region C3496_13335 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C3496_13335 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C3496_13340 PF00768 D-alanyl-D-alanine carboxypeptidase C3496_13340 PF07943 Penicillin-binding protein 5, C-terminal domain C3496_13345 PF07670 Nucleoside recognition C3496_13350 PF07670 Nucleoside recognition C3496_13355 PF00849 RNA pseudouridylate synthase C3496_13355 PF01479 S4 domain C3496_13360 PF00578 AhpC/TSA family C3496_13365 PF05140 ResB-like family C3496_13370 PF01578 Cytochrome C assembly protein C3496_13375 PF00072 Response regulator receiver domain C3496_13375 PF00486 Transcriptional regulatory protein, C terminal C3496_13380 PF00672 HAMP domain C3496_13380 PF00989 PAS fold C3496_13380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_13380 PF18698 Histidine kinase sensor domain C3496_13380 PF00512 His Kinase A (phospho-acceptor) domain C3496_13385 PF01923 Cobalamin adenosyltransferase C3496_13390 PF01551 Peptidase family M23 C3496_13400 PF12822 ECF transporter, substrate-specific component C3496_13415 PF00271 Helicase conserved C-terminal domain C3496_13415 PF00270 DEAD/DEAH box helicase C3496_13420 PF02517 CPBP intramembrane metalloprotease C3496_13430 PF00149 Calcineurin-like phosphoesterase C3496_13435 PF13411 MerR HTH family regulatory protein C3496_13435 PF02310 B12 binding domain C3496_13435 PF02607 B12 binding domain C3496_13440 PF05389 Negative regulator of genetic competence (MecA) C3496_13445 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C3496_13445 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C3496_13470 PF17763 Glutaminase/Asparaginase C-terminal domain C3496_13470 PF00710 Asparaginase, N-terminal C3496_13480 PF02224 Cytidylate kinase C3496_13485 PF00575 S1 RNA binding domain C3496_13490 PF01070 FMN-dependent dehydrogenase C3496_13495 PF14140 YpzI-like protein C3496_13505 PF14045 YIEGIA protein C3496_13515 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal C3496_13515 PF01926 50S ribosome-binding GTPase C3496_13520 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C3496_13520 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C3496_13530 PF10966 Protein of unknown function (DUF2768) C3496_13540 PF09547 Stage IV sporulation protein A (spore_IV_A) C3496_13545 PF00216 Bacterial DNA-binding protein C3496_13550 PF01227 GTP cyclohydrolase I C3496_13555 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 C3496_13560 PF01209 ubiE/COQ5 methyltransferase family C3496_13565 PF00348 Polyprenyl synthetase C3496_13570 PF00334 Nucleoside diphosphate kinase C3496_13575 PF01264 Chorismate synthase C3496_13580 PF01761 3-dehydroquinate synthase C3496_13585 PF00155 Aminotransferase class I and II C3496_13595 PF08864 UPF0302 domain C3496_13595 PF08858 IDEAL domain C3496_13600 PF10673 Protein of unknown function (DUF2487) C3496_13605 PF00355 Rieske [2Fe-2S] domain C3496_13610 PF00033 Cytochrome b/b6/petB C3496_13615 PF00032 Cytochrome b(C-terminal)/b6/petD C3496_13615 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C3496_13625 PF07187 Protein of unknown function (DUF1405) C3496_13635 PF09577 Sporulation protein YpjB (SpoYpjB) C3496_13640 PF04298 Putative neutral zinc metallopeptidase C3496_13650 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 C3496_13650 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) C3496_13660 PF03819 MazG nucleotide pyrophosphohydrolase domain C3496_13665 PF05173 Dihydrodipicolinate reductase, C-terminus C3496_13665 PF01113 Dihydrodipicolinate reductase, N-terminus C3496_13670 PF02142 MGS-like domain C3496_13675 PF02585 GlcNAc-PI de-N-acetylase C3496_13680 PF00534 Glycosyl transferases group 1 C3496_13680 PF13439 Glycosyltransferase Family 4 C3496_13685 PF13735 tRNA nucleotidyltransferase domain 2 putative C3496_13685 PF12627 Probable RNA and SrmB- binding site of polymerase A C3496_13685 PF01743 Poly A polymerase head domain C3496_13690 PF08279 HTH domain C3496_13690 PF02237 Biotin protein ligase C terminal domain C3496_13690 PF03099 Biotin/lipoate A/B protein ligase family C3496_13705 PF02548 Ketopantoate hydroxymethyltransferase C3496_13710 PF02569 Pantoate-beta-alanine ligase C3496_13715 PF02261 Aspartate decarboxylase C3496_13720 PF00929 Exonuclease C3496_13720 PF04851 Type III restriction enzyme, res subunit C3496_13720 PF13307 Helicase C-terminal domain C3496_13725 PF14084 Protein of unknown function (DUF4264) C3496_13735 PF00155 Aminotransferase class I and II C3496_13740 PF07261 Replication initiation and membrane attachment C3496_13745 PF00730 HhH-GPD superfamily base excision DNA repair protein C3496_13745 PF10576 Iron-sulfur binding domain of endonuclease III C3496_13745 PF00633 Helix-hairpin-helix motif C3496_13755 PF00912 Transglycosylase C3496_13755 PF00905 Penicillin binding protein transpeptidase domain C3496_13760 PF03838 Recombination protein U C3496_13765 PF10720 Protein of unknown function (DUF2515) C3496_13800 PF06908 YspA SLOG family C3496_13805 PF05103 DivIVA protein C3496_13815 PF01170 Putative RNA methylase family UPF0020 C3496_13815 PF02926 THUMP domain C3496_13825 PF13307 Helicase C-terminal domain C3496_13830 PF02074 Carboxypeptidase Taq (M32) metallopeptidase C3496_13840 PF01636 Phosphotransferase enzyme family C3496_13845 PF00557 Metallopeptidase family M24 C3496_13850 PF00156 Phosphoribosyl transferase domain C3496_13855 PF00860 Permease family C3496_13860 PF04235 Protein of unknown function (DUF418) C3496_13870 PF00350 Dynamin family C3496_13880 PF00583 Acetyltransferase (GNAT) family C3496_13885 PF10752 Protein of unknown function (DUF2533) C3496_13890 PF00581 Rhodanese-like domain C3496_13915 PF03738 Glutathionylspermidine synthase preATP-grasp C3496_13925 PF00689 Cation transporting ATPase, C-terminus C3496_13925 PF00690 Cation transporter/ATPase, N-terminus C3496_13930 PF01367 5'-3' exonuclease, C-terminal SAM fold C3496_13930 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C3496_13955 PF02397 Bacterial sugar transferase C3496_13970 PF00535 Glycosyl transferase family 2 C3496_13975 PF13439 Glycosyltransferase Family 4 C3496_13975 PF00534 Glycosyl transferases group 1 C3496_14010 PF13456 Reverse transcriptase-like C3496_14015 PF01263 Aldose 1-epimerase C3496_14040 PF00313 'Cold-shock' DNA-binding domain C3496_14045 PF08892 YqcI/YcgG family C3496_14050 PF01810 LysE type translocator C3496_14065 PF04341 Protein of unknown function, DUF485 C3496_14070 PF00474 Sodium:solute symporter family C3496_14075 PF00202 Aminotransferase class-III C3496_14085 PF00999 Sodium/hydrogen exchanger family C3496_14090 PF00753 Metallo-beta-lactamase superfamily C3496_14090 PF17770 Ribonuclease J C-terminal domain C3496_14090 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain C3496_14095 PF06445 GyrI-like small molecule binding domain C3496_14095 PF13411 MerR HTH family regulatory protein C3496_14105 PF04239 Protein of unknown function (DUF421) C3496_14110 PF02698 DUF218 domain C3496_14120 PF00881 Nitroreductase family C3496_14165 PF17209 Hfq protein C3496_14175 PF01618 MotA/TolQ/ExbB proton channel family C3496_14180 PF13677 Membrane MotB of proton-channel complex MotA/MotB C3496_14180 PF00691 OmpA family C3496_14185 PF00072 Response regulator receiver domain C3496_14190 PF02895 Signal transducing histidine kinase, homodimeric domain C3496_14190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_14190 PF01584 CheW-like domain C3496_14190 PF07194 P2 response regulator binding domain C3496_14190 PF01627 Hpt domain C3496_14195 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C3496_14195 PF04509 CheC-like family C3496_14210 PF03705 CheR methyltransferase, all-alpha domain C3496_14210 PF01739 CheR methyltransferase, SAM binding domain C3496_14230 PF00460 Flagella basal body rod protein C3496_14230 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C3496_14235 PF00700 Bacterial flagellin C-terminal helical region C3496_14235 PF00669 Bacterial flagellin N-terminal helical region C3496_14255 PF00460 Flagella basal body rod protein C3496_14260 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C3496_14260 PF00460 Flagella basal body rod protein C3496_14265 PF02049 Flagellar hook-basal body complex protein FliE C3496_14270 PF01514 Secretory protein of YscJ/FliF family C3496_14270 PF08345 Flagellar M-ring protein C-terminal C3496_14275 PF14841 FliG middle domain C3496_14275 PF01706 FliG C-terminal domain C3496_14275 PF14842 FliG N-terminal domain C3496_14285 PF18269 T3SS EscN ATPase C-terminal domain C3496_14285 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C3496_14285 PF02874 ATP synthase alpha/beta family, beta-barrel domain C3496_14305 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C3496_14305 PF07559 Flagellar basal body protein FlaE C3496_14305 PF00460 Flagella basal body rod protein C3496_14320 PF01584 CheW-like domain C3496_14320 PF00072 Response regulator receiver domain C3496_14325 PF12181 DNA binding domain of the motility gene repressor (MogR) C3496_14330 PF00700 Bacterial flagellin C-terminal helical region C3496_14330 PF00669 Bacterial flagellin N-terminal helical region C3496_14335 PF00700 Bacterial flagellin C-terminal helical region C3496_14335 PF00669 Bacterial flagellin N-terminal helical region C3496_14340 PF01464 Transglycosylase SLT domain C3496_14350 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C3496_14350 PF02154 Flagellar motor switch protein FliM C3496_14355 PF04509 CheC-like family C3496_14355 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C3496_14365 PF00813 FliP family C3496_14370 PF01313 Bacterial export proteins, family 3 C3496_14380 PF01312 FlhB HrpN YscU SpaS Family C3496_14385 PF00771 FHIPEP family C3496_14390 PF00448 SRP54-type protein, GTPase domain C3496_14395 PF00460 Flagella basal body rod protein C3496_14395 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C3496_14400 PF01411 tRNA synthetases class II (A) C3496_14400 PF02272 DHHA1 domain C3496_14400 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C3496_14425 PF17932 Tetracyclin repressor-like, C-terminal domain C3496_14425 PF00440 Bacterial regulatory proteins, tetR family C3496_14430 PF17329 Family of unknown function (DUF5367) C3496_14445 PF03992 Antibiotic biosynthesis monooxygenase C3496_14450 PF08141 Small acid-soluble spore protein H family C3496_14470 PF03466 LysR substrate binding domain C3496_14470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3496_14475 PF08402 TOBE domain C3496_14475 PF00005 ABC transporter C3496_14485 PF00528 Binding-protein-dependent transport system inner membrane component C3496_14490 PF00753 Metallo-beta-lactamase superfamily C3496_14490 PF12706 Beta-lactamase superfamily domain C3496_14500 PF10787 Uncharacterised protein from bacillus cereus group C3496_14520 PF07943 Penicillin-binding protein 5, C-terminal domain C3496_14520 PF00768 D-alanyl-D-alanine carboxypeptidase C3496_14530 PF00300 Histidine phosphatase superfamily (branch 1) C3496_14545 PF01047 MarR family C3496_14555 PF00733 Asparagine synthase C3496_14555 PF13537 Glutamine amidotransferase domain C3496_14575 PF01545 Cation efflux family C3496_14575 PF16916 Dimerisation domain of Zinc Transporter C3496_14585 PF07729 FCD domain C3496_14585 PF00392 Bacterial regulatory proteins, gntR family C3496_14590 PF00892 EamA-like transporter family C3496_14595 PF07683 Cobalamin synthesis protein cobW C-terminal domain C3496_14595 PF02492 CobW/HypB/UreG, nucleotide-binding domain C3496_14610 PF00535 Glycosyl transferase family 2 C3496_14615 PF03553 Na+/H+ antiporter family C3496_14620 PF13411 MerR HTH family regulatory protein C3496_14630 PF00206 Lyase C3496_14630 PF10415 Fumarase C C-terminus C3496_14650 PF01554 MatE C3496_14660 PF03575 Peptidase family S51 C3496_14680 PF02683 Cytochrome C biogenesis protein transmembrane region C3496_14685 PF00578 AhpC/TSA family C3496_14700 PF00291 Pyridoxal-phosphate dependent enzyme C3496_14705 PF04286 Protein of unknown function (DUF445) C3496_14735 PF00196 Bacterial regulatory proteins, luxR family C3496_14735 PF00072 Response regulator receiver domain C3496_14740 PF13185 GAF domain C3496_14740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_14740 PF13492 GAF domain C3496_14740 PF07730 Histidine kinase C3496_14745 PF00005 ABC transporter C3496_14760 PF13091 PLD-like domain C3496_14765 PF00696 Amino acid kinase family C3496_14770 PF00375 Sodium:dicarboxylate symporter family C3496_14775 PF10415 Fumarase C C-terminus C3496_14775 PF00206 Lyase C3496_14780 PF03949 Malic enzyme, NAD binding domain C3496_14780 PF00390 Malic enzyme, N-terminal domain C3496_14785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_14790 PF00072 Response regulator receiver domain C3496_14790 PF08664 YcbB domain C3496_14795 PF04434 SWIM zinc finger C3496_14795 PF00176 SNF2 family N-terminal domain C3496_14795 PF00271 Helicase conserved C-terminal domain C3496_14815 PF03590 Aspartate-ammonia ligase C3496_14820 PF01381 Helix-turn-helix C3496_14830 PF00696 Amino acid kinase family C3496_14830 PF13840 ACT domain C3496_14845 PF13761 Domain of unknown function (DUF4166) C3496_14850 PF14158 YndJ-like protein C3496_14860 PF07690 Major Facilitator Superfamily C3496_14875 PF02554 Carbon starvation protein CstA C3496_14880 PF03976 Polyphosphate kinase 2 (PPK2) C3496_14890 PF07690 Major Facilitator Superfamily C3496_14895 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C3496_14895 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C3496_14900 PF01926 50S ribosome-binding GTPase C3496_14900 PF13167 GTP-binding GTPase N-terminal C3496_14900 PF16360 GTP-binding GTPase Middle Region C3496_14905 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C3496_14910 PF07690 Major Facilitator Superfamily C3496_14915 PF00291 Pyridoxal-phosphate dependent enzyme C3496_14930 PF14667 Polysaccharide biosynthesis C-terminal domain C3496_14930 PF01943 Polysaccharide biosynthesis protein C3496_14935 PF00209 Sodium:neurotransmitter symporter family C3496_14940 PF00457 Glycosyl hydrolases family 11 C3496_14940 PF03422 Carbohydrate binding module (family 6) C3496_14940 PF01522 Polysaccharide deacetylase C3496_14950 PF04239 Protein of unknown function (DUF421) C3496_14975 PF01625 Peptide methionine sulfoxide reductase C3496_14985 PF01063 Amino-transferase class IV C3496_14990 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C3496_14990 PF00205 Thiamine pyrophosphate enzyme, central domain C3496_14990 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C3496_15000 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain C3496_15000 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain C3496_15005 PF00920 Dehydratase family C3496_15010 PF00291 Pyridoxal-phosphate dependent enzyme C3496_15010 PF00585 C-terminal regulatory domain of Threonine dehydratase C3496_15020 PF09587 Bacterial capsule synthesis protein PGA_cap C3496_15035 PF07690 Major Facilitator Superfamily C3496_15040 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase C3496_15050 PF04397 LytTr DNA-binding domain C3496_15050 PF00072 Response regulator receiver domain C3496_15055 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain C3496_15055 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain C3496_15070 PF01979 Amidohydrolase family C3496_15075 PF12146 Serine aminopeptidase, S33 C3496_15075 PF13026 Protein of unknown function (DUF3887) C3496_15080 PF00005 ABC transporter C3496_15085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C3496_15110 PF13186 Iron-sulfur cluster-binding domain C3496_15110 PF04055 Radical SAM superfamily C3496_15115 PF13302 Acetyltransferase (GNAT) domain C3496_15120 PF00072 Response regulator receiver domain C3496_15120 PF00486 Transcriptional regulatory protein, C terminal C3496_15140 PF01566 Natural resistance-associated macrophage protein C3496_15145 PF17773 UPF0176 acylphosphatase like domain C3496_15145 PF12368 Rhodanase C-terminal C3496_15145 PF00581 Rhodanese-like domain C3496_15155 PF02558 Ketopantoate reductase PanE/ApbA C3496_15155 PF08546 Ketopantoate reductase PanE/ApbA C terminal C3496_15160 PF13520 Amino acid permease C3496_15170 PF05791 Bacillus haemolytic enterotoxin (HBL) C3496_15195 PF07728 AAA domain (dynein-related subfamily) C3496_15205 PF05762 VWA domain containing CoxE-like protein C3496_15230 PF04198 Putative sugar-binding domain C3496_15235 PF01791 DeoC/LacD family aldolase C3496_15240 PF07662 Na+ dependent nucleoside transporter C-terminus C3496_15240 PF01773 Na+ dependent nucleoside transporter N-terminus C3496_15245 PF02885 Glycosyl transferase family, helical bundle domain C3496_15245 PF00591 Glycosyl transferase family, a/b domain C3496_15245 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain C3496_15250 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C3496_15255 PF07301 Protein of unknown function (DUF1453) C3496_15260 PF05979 Bacterial protein of unknown function (DUF896) C3496_15285 PF00394 Multicopper oxidase C3496_15285 PF07732 Multicopper oxidase C3496_15285 PF07731 Multicopper oxidase C3496_15290 PF01551 Peptidase family M23 C3496_15300 PF01396 Topoisomerase DNA binding C4 zinc finger C3496_15300 PF01131 DNA topoisomerase C3496_15300 PF01751 Toprim domain C3496_15300 PF13342 C-terminal repeat of topoisomerase C3496_15310 PF00005 ABC transporter C3496_15340 PF02525 Flavodoxin-like fold C3496_15345 PF05525 Branched-chain amino acid transport protein C3496_15355 PF13115 YtkA-like C3496_15355 PF04234 CopC domain C3496_15355 PF05425 Copper resistance protein D C3496_15360 PF07987 Domain of unkown function (DUF1775) C3496_15370 PF00892 EamA-like transporter family C3496_15375 PF03466 LysR substrate binding domain C3496_15375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3496_15380 PF02082 Transcriptional regulator C3496_15385 PF01323 DSBA-like thioredoxin domain C3496_15390 PF00881 Nitroreductase family C3496_15400 PF01425 Amidase C3496_15405 PF01594 AI-2E family transporter C3496_15415 PF00056 lactate/malate dehydrogenase, NAD binding domain C3496_15415 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain C3496_15420 PF01593 Flavin containing amine oxidoreductase C3496_15430 PF07683 Cobalamin synthesis protein cobW C-terminal domain C3496_15430 PF02492 CobW/HypB/UreG, nucleotide-binding domain C3496_15440 PF13193 AMP-binding enzyme C-terminal domain C3496_15440 PF00501 AMP-binding enzyme C3496_15445 PF01575 MaoC like domain C3496_15450 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C3496_15450 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C3496_15465 PF00005 ABC transporter C3496_15465 PF12399 Branched-chain amino acid ATP-binding cassette transporter C3496_15470 PF00005 ABC transporter C3496_15475 PF02653 Branched-chain amino acid transport system / permease component C3496_15485 PF03466 LysR substrate binding domain C3496_15485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3496_15495 PF14552 Tautomerase enzyme C3496_15505 PF01047 MarR family C3496_15515 PF01654 Cytochrome bd terminal oxidase subunit I C3496_15520 PF02322 Cytochrome bd terminal oxidase subunit II C3496_15525 PF00005 ABC transporter C3496_15525 PF00664 ABC transporter transmembrane region C3496_15530 PF00005 ABC transporter C3496_15530 PF00664 ABC transporter transmembrane region C3496_15550 PF02016 LD-carboxypeptidase N-terminal domain C3496_15550 PF17676 LD-carboxypeptidase C-terminal domain C3496_15555 PF00768 D-alanyl-D-alanine carboxypeptidase C3496_15555 PF07943 Penicillin-binding protein 5, C-terminal domain C3496_15570 PF00877 NlpC/P60 family C3496_15570 PF01476 LysM domain C3496_15580 PF00664 ABC transporter transmembrane region C3496_15580 PF00005 ABC transporter C3496_15585 PF00486 Transcriptional regulatory protein, C terminal C3496_15585 PF00072 Response regulator receiver domain C3496_15590 PF00989 PAS fold C3496_15590 PF16736 Single Cache-like C3496_15590 PF00512 His Kinase A (phospho-acceptor) domain C3496_15590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_15600 PF00106 short chain dehydrogenase C3496_15605 PF01596 O-methyltransferase C3496_15610 PF04439 Streptomycin adenylyltransferase C3496_15615 PF01522 Polysaccharide deacetylase C3496_15640 PF01842 ACT domain C3496_15640 PF03447 Homoserine dehydrogenase, NAD binding domain C3496_15640 PF00742 Homoserine dehydrogenase C3496_15645 PF00291 Pyridoxal-phosphate dependent enzyme C3496_15650 PF00288 GHMP kinases N terminal domain C3496_15650 PF08544 GHMP kinases C terminal C3496_15665 PF03816 Cell envelope-related transcriptional attenuator domain C3496_15675 PF00072 Response regulator receiver domain C3496_15675 PF00486 Transcriptional regulatory protein, C terminal C3496_15680 PF00989 PAS fold C3496_15680 PF00512 His Kinase A (phospho-acceptor) domain C3496_15680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_15680 PF16736 Single Cache-like C3496_15685 PF01522 Polysaccharide deacetylase C3496_15695 PF02308 MgtC family C3496_15700 PF00583 Acetyltransferase (GNAT) family C3496_15705 PF04183 IucA / IucC family C3496_15705 PF06276 Ferric iron reductase FhuF-like transporter C3496_15710 PF06276 Ferric iron reductase FhuF-like transporter C3496_15710 PF04183 IucA / IucC family C3496_15715 PF13193 AMP-binding enzyme C-terminal domain C3496_15715 PF00501 AMP-binding enzyme C3496_15730 PF01261 Xylose isomerase-like TIM barrel C3496_15735 PF00269 Small, acid-soluble spore proteins, alpha/beta type C3496_15740 PF07690 Major Facilitator Superfamily C3496_15745 PF01810 LysE type translocator C3496_15750 PF00392 Bacterial regulatory proteins, gntR family C3496_15750 PF00155 Aminotransferase class I and II C3496_15760 PF01734 Patatin-like phospholipase C3496_15785 PF13344 Haloacid dehalogenase-like hydrolase C3496_15785 PF00293 NUDIX domain C3496_15790 PF02540 NAD synthase C3496_15795 PF02687 FtsX-like permease family C3496_15800 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin C3496_15800 PF18277 AbrB C-terminal domain C3496_15805 PF00082 Subtilase family C3496_15810 PF01022 Bacterial regulatory protein, arsR family C3496_15815 PF00248 Aldo/keto reductase family C3496_15825 PF07690 Major Facilitator Superfamily C3496_15845 PF03193 RsgA GTPase C3496_15850 PF00672 HAMP domain C3496_15850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3496_15850 PF02743 Cache domain C3496_15875 PF00210 Ferritin-like domain C3496_15890 PF00296 Luciferase-like monooxygenase C3496_15900 PF01593 Flavin containing amine oxidoreductase C3496_15910 PF00248 Aldo/keto reductase family C3496_15920 PF07683 Cobalamin synthesis protein cobW C-terminal domain C3496_15920 PF02492 CobW/HypB/UreG, nucleotide-binding domain C3496_15925 PF00583 Acetyltransferase (GNAT) family C3496_15930 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment C3496_15930 PF01297 Zinc-uptake complex component A periplasmic C3496_15940 PF13460 NAD(P)H-binding C3496_15945 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C3496_15950 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C3496_15950 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C3496_15960 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C3496_15965 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C3496_15975 PF00300 Histidine phosphatase superfamily (branch 1) C3496_15985 PF08757 CotH kinase protein C3496_15990 PF00293 NUDIX domain C3496_15995 PF09335 SNARE associated Golgi protein C3496_16000 PF14667 Polysaccharide biosynthesis C-terminal domain C3496_16000 PF01943 Polysaccharide biosynthesis protein C3496_16010 PF03773 Predicted permease C3496_16015 PF09323 Domain of unknown function (DUF1980) C3496_16020 PF03061 Thioesterase superfamily C3496_16030 PF13396 Phospholipase_D-nuclease N-terminal C3496_16030 PF13091 PLD-like domain C3496_16045 PF13460 NAD(P)H-binding C3496_16050 PF04306 Protein of unknown function (DUF456) C3496_16055 PF01595 Cyclin M transmembrane N-terminal domain C3496_16055 PF03471 Transporter associated domain C3496_16055 PF00571 CBS domain C3496_16070 PF05525 Branched-chain amino acid transport protein C3496_16075 PF01588 Putative tRNA binding domain C3496_16095 PF07454 Stage II sporulation protein P (SpoIIP) C3496_16105 PF02557 D-alanyl-D-alanine carboxypeptidase C3496_16115 PF01425 Amidase C3496_16120 PF07690 Major Facilitator Superfamily C3496_16130 PF01145 SPFH domain / Band 7 family C3496_16135 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal C3496_16135 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal C3496_16145 PF06574 FAD synthetase C3496_16150 PF06052 3-hydroxyanthranilic acid dioxygenase C3496_16160 PF01042 Endoribonuclease L-PSP C3496_16165 PF00171 Aldehyde dehydrogenase family C3496_16170 PF01557 Fumarylacetoacetate (FAA) hydrolase family C3496_16175 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation C3496_16175 PF01118 Semialdehyde dehydrogenase, NAD binding domain C3496_16180 PF07836 DmpG-like communication domain C3496_16180 PF00682 HMGL-like C3496_16190 PF01361 Tautomerase enzyme C3496_16195 PF00300 Histidine phosphatase superfamily (branch 1) C3496_16210 PF01168 Alanine racemase, N-terminal domain C3496_16210 PF00842 Alanine racemase, C-terminal domain C3496_16215 PF01209 ubiE/COQ5 methyltransferase family C3496_16230 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase C3496_16235 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) C3496_16235 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 C3496_16240 PF00392 Bacterial regulatory proteins, gntR family C3496_16240 PF00155 Aminotransferase class I and II C3496_16270 PF00583 Acetyltransferase (GNAT) family C3496_16360 PF00589 Phage integrase family C3496_16465 PF09579 Sporulation protein YtfJ (Spore_YtfJ) C3496_16490 PF01209 ubiE/COQ5 methyltransferase family C3496_16495 PF01268 Formate--tetrahydrofolate ligase C3496_16505 PF00270 DEAD/DEAH box helicase C3496_16505 PF00271 Helicase conserved C-terminal domain C3496_16510 PF01261 Xylose isomerase-like TIM barrel C3496_16515 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C3496_16525 PF08240 Alcohol dehydrogenase GroES-like domain C3496_16525 PF00107 Zinc-binding dehydrogenase C3496_16530 PF08281 Sigma-70, region 4 C3496_16530 PF04542 Sigma-70 region 2 C3496_16555 PF01613 Flavin reductase like domain C3496_16555 PF00258 Flavodoxin C3496_16575 PF00255 Glutathione peroxidase C3496_16580 PF13559 Domain of unknown function (DUF4129) C3496_16580 PF11992 Domain of unknown function (DUF3488) C3496_16580 PF01841 Transglutaminase-like superfamily C3496_16585 PF01882 Protein of unknown function DUF58 C3496_16590 PF17863 AAA lid domain C3496_16590 PF07726 ATPase family associated with various cellular activities (AAA) C3496_16605 PF01568 Molydopterin dinucleotide binding domain C3496_16605 PF14710 Respiratory nitrate reductase alpha N-terminal C3496_16605 PF00384 Molybdopterin oxidoreductase C3496_16610 PF14711 Respiratory nitrate reductase beta C-terminal C3496_16610 PF13247 4Fe-4S dicluster domain C3496_16615 PF02613 Nitrate reductase delta subunit C3496_16620 PF02665 Nitrate reductase gamma subunit C3496_16625 PF00027 Cyclic nucleotide-binding domain C3496_16625 PF00325 Bacterial regulatory proteins, crp family C3496_16630 PF06463 Molybdenum Cofactor Synthesis C C3496_16630 PF04055 Radical SAM superfamily C3496_16635 PF00899 ThiF family C3496_16640 PF03454 MoeA C-terminal region (domain IV) C3496_16640 PF00994 Probable molybdopterin binding domain C3496_16640 PF03453 MoeA N-terminal region (domain I and II) C3496_16645 PF02391 MoaE protein C3496_16655 PF07690 Major Facilitator Superfamily C3496_16680 PF01903 CbiX C3496_16685 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C3496_16690 PF00355 Rieske [2Fe-2S] domain C3496_16695 PF04324 BFD-like [2Fe-2S] binding domain C3496_16695 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C3496_16695 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C3496_16695 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3496_16695 PF18267 Rubredoxin NAD+ reductase C-terminal domain C3496_16700 PF04405 Domain of Unknown function (DUF542) C3496_16700 PF01814 Hemerythrin HHE cation binding domain C3496_16735 PF04232 Stage V sporulation protein S (SpoVS) C3496_16780 PF01966 HD domain C3496_16785 PF12848 ABC transporter C3496_16785 PF16326 ABC transporter C-terminal domain C3496_16785 PF00005 ABC transporter C3496_16800 PF00436 Single-strand binding protein family C3496_16805 PF13769 Virulence factor C3496_16805 PF08712 Scaffold protein Nfu/NifU N terminal C3496_16815 PF06491 Disulphide isomerase C3496_16820 PF04445 Putative SAM-dependent methyltransferase C3496_16825 PF03485 Arginyl tRNA synthetase N terminal domain C3496_16825 PF05746 DALR anticodon binding domain C3496_16825 PF00750 tRNA synthetases class I (R) C3496_16845 PF00133 tRNA synthetases class I (I, L, M and V) C3496_16845 PF08264 Anticodon-binding domain of tRNA C3496_16875 PF08245 Mur ligase middle domain C3496_16875 PF02875 Mur ligase family, glutamate ligase domain C3496_16875 PF01225 Mur ligase family, catalytic domain C3496_16885 PF00152 tRNA synthetases class II (D, K and N) C3496_16885 PF01336 OB-fold nucleic acid binding domain C3496_16905 PF12538 DNA transporter C3496_16905 PF01580 FtsK/SpoIIIE family C3496_16970 PF02371 Transposase IS116/IS110/IS902 family C3496_16970 PF01548 Transposase C3496_17050 PF00209 Sodium:neurotransmitter symporter family C3496_17065 PF10997 Alternate to MurJ C3496_17070 PF13419 Haloacid dehalogenase-like hydrolase C3496_17080 PF00465 Iron-containing alcohol dehydrogenase C3496_17085 PF01177 Asp/Glu/Hydantoin racemase C3496_17090 PF01980 tRNA-methyltransferase O C3496_17095 PF00583 Acetyltransferase (GNAT) family C3496_17110 PF00005 ABC transporter C3496_17115 PF05975 Bacterial ABC transporter protein EcsB C3496_17120 PF14005 YpjP-like protein C3496_17125 PF13419 Haloacid dehalogenase-like hydrolase C3496_17145 PF00144 Beta-lactamase C3496_17145 PF07930 D-aminopeptidase, domain B C3496_17150 PF00303 Thymidylate synthase C3496_17155 PF00186 Dihydrofolate reductase C3496_17160 PF00905 Penicillin binding protein transpeptidase domain C3496_17160 PF03717 Penicillin-binding Protein dimerisation domain C3496_17160 PF05223 NTF2-like N-terminal transpeptidase domain C3496_17165 PF02525 Flavodoxin-like fold C3496_17170 PF01553 Acyltransferase C3496_17175 PF03006 Haemolysin-III related C3496_17180 PF02416 mttA/Hcf106 family C3496_17185 PF00902 Sec-independent protein translocase protein (TatC) C3496_17200 PF02645 Uncharacterised protein, DegV family COG1307 C3496_17205 PF12706 Beta-lactamase superfamily domain C3496_17210 PF02630 SCO1/SenC C3496_17215 PF00011 Hsp20/alpha crystallin family C3496_17220 PF00733 Asparagine synthase C3496_17220 PF13537 Glutamine amidotransferase domain C3496_17240 PF01497 Periplasmic binding protein C3496_17245 PF01063 Amino-transferase class IV C3496_17250 PF00881 Nitroreductase family C3496_17260 PF00857 Isochorismatase family C3496_17265 PF00293 NUDIX domain C3496_17270 PF00011 Hsp20/alpha crystallin family C3496_17275 PF00924 Mechanosensitive ion channel C3496_17280 PF07730 Histidine kinase C3496_17280 PF13185 GAF domain C3496_17285 PF00072 Response regulator receiver domain C3496_17285 PF00196 Bacterial regulatory proteins, luxR family C3496_17290 PF01418 Helix-turn-helix domain, rpiR family C3496_17290 PF01380 SIS domain C3496_17295 PF00107 Zinc-binding dehydrogenase C3496_17295 PF08240 Alcohol dehydrogenase GroES-like domain C3496_17310 PF00144 Beta-lactamase C3496_17335 PF03358 NADPH-dependent FMN reductase C3496_17350 PF00005 ABC transporter C3496_17350 PF00571 CBS domain C3496_17355 PF00528 Binding-protein-dependent transport system inner membrane component C3496_17360 PF13520 Amino acid permease C3496_17390 PF01595 Cyclin M transmembrane N-terminal domain C3496_17390 PF03471 Transporter associated domain C3496_17390 PF00571 CBS domain C3496_17395 PF00171 Aldehyde dehydrogenase family C3496_17400 PF07997 Protein of unknown function (DUF1694) C3496_17405 PF09385 Histidine kinase N terminal C3496_17420 PF00202 Aminotransferase class-III C3496_17425 PF01144 Coenzyme A transferase C3496_17430 PF01144 Coenzyme A transferase C3496_17435 PF07687 Peptidase dimerisation domain C3496_17435 PF01546 Peptidase family M20/M25/M40 C3496_17440 PF00583 Acetyltransferase (GNAT) family C3496_17445 PF00158 Sigma-54 interaction domain C3496_17445 PF02954 Bacterial regulatory protein, Fis family C3496_17445 PF13426 PAS domain C3496_17455 PF12544 Lysine-2,3-aminomutase C3496_17460 PF14122 YokU-like protein, putative antitoxin C3496_17465 PF06855 YozE SAM-like fold C3496_17480 PF14162 YozD-like protein C3496_17490 PF08239 Bacterial SH3 domain C3496_17490 PF00069 Protein kinase domain C3496_17495 PF07070 SpoOM protein C3496_17500 PF01569 PAP2 superfamily C3496_17505 PF16916 Dimerisation domain of Zinc Transporter C3496_17505 PF01545 Cation efflux family C3496_17510 PF00085 Thioredoxin C3496_17610 PF10676 Spore germination protein gerPA/gerPF C3496_17635 PF00905 Penicillin binding protein transpeptidase domain C3496_17635 PF00912 Transglycosylase C3496_17645 PF07690 Major Facilitator Superfamily C3496_17650 PF01521 Iron-sulphur cluster biosynthesis C3496_17655 PF00285 Citrate synthase, C-terminal domain C3496_17660 PF03972 MmgE/PrpD family C3496_17670 PF02770 Acyl-CoA dehydrogenase, middle domain C3496_17670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C3496_17670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C3496_17675 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C3496_17675 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C3496_17680 PF00171 Aldehyde dehydrogenase family C3496_17685 PF01810 LysE type translocator C3496_17690 PF00378 Enoyl-CoA hydratase/isomerase C3496_17700 PF10763 Protein of unknown function (DUF2584) C3496_17705 PF00149 Calcineurin-like phosphoesterase C3496_17705 PF12320 Type 5 capsule protein repressor C-terminal domain C3496_17710 PF13476 AAA domain C3496_17720 PF01022 Bacterial regulatory protein, arsR family C3496_17740 PF07690 Major Facilitator Superfamily C3496_17750 PF00106 short chain dehydrogenase C3496_17755 PF00425 chorismate binding enzyme C3496_17760 PF13193 AMP-binding enzyme C-terminal domain C3496_17760 PF00501 AMP-binding enzyme C3496_17765 PF00857 Isochorismatase family C3496_17765 PF00550 Phosphopantetheine attachment site C3496_17770 PF00550 Phosphopantetheine attachment site C3496_17770 PF00501 AMP-binding enzyme C3496_17770 PF13193 AMP-binding enzyme C-terminal domain C3496_17770 PF00668 Condensation domain C3496_17770 PF00975 Thioesterase domain C3496_17775 PF03621 MbtH-like protein C3496_17780 PF07690 Major Facilitator Superfamily C3496_17795 PF00216 Bacterial DNA-binding protein C3496_17805 PF05163 DinB family C3496_17810 PF00082 Subtilase family C3496_17815 PF01235 Sodium:alanine symporter family C3496_17830 PF16291 Domain of unknown function (DUF4937 C3496_17835 PF01479 S4 domain C3496_17835 PF00849 RNA pseudouridylate synthase C3496_17840 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C3496_17840 PF03129 Anticodon binding domain C3496_17840 PF02824 TGS domain C3496_17840 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C3496_17845 PF00005 ABC transporter C3496_17860 PF12146 Serine aminopeptidase, S33 C3496_17865 PF07690 Major Facilitator Superfamily C3496_17880 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C3496_17880 PF00205 Thiamine pyrophosphate enzyme, central domain C3496_17880 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C3496_17930 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C3496_17930 PF02403 Seryl-tRNA synthetase N-terminal domain C3496_17935 PF03176 MMPL family C3496_17945 PF00302 Chloramphenicol acetyltransferase C3496_17960 PF00583 Acetyltransferase (GNAT) family C3496_17985 PF01593 Flavin containing amine oxidoreductase C3496_18000 PF13302 Acetyltransferase (GNAT) domain C3496_18010 PF00313 'Cold-shock' DNA-binding domain C3496_18045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3496_18045 PF03466 LysR substrate binding domain C3496_18050 PF01118 Semialdehyde dehydrogenase, NAD binding domain C3496_18050 PF02774 Semialdehyde dehydrogenase, dimerisation domain C3496_18065 PF03466 LysR substrate binding domain C3496_18065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3496_18070 PF03475 3-alpha domain C3496_18070 PF03473 MOSC domain C3496_18085 PF00005 ABC transporter C3496_18085 PF00664 ABC transporter transmembrane region C3496_18090 PF00005 ABC transporter C3496_18090 PF00664 ABC transporter transmembrane region C3496_18105 PF01810 LysE type translocator C3496_18110 PF07883 Cupin domain C3496_18110 PF01381 Helix-turn-helix C3496_18140 PF13291 ACT domain C3496_18140 PF02824 TGS domain C3496_18140 PF04607 Region found in RelA / SpoT proteins C3496_18150 PF00890 FAD binding domain C3496_18155 PF04542 Sigma-70 region 2 C3496_18155 PF08281 Sigma-70, region 4 C3496_18155 PF12680 SnoaL-like domain C3496_18185 PF02638 Glycosyl hydrolase-like 10 C3496_18200 PF02378 Phosphotransferase system, EIIC C3496_18210 PF03702 Anhydro-N-acetylmuramic acid kinase C3496_18215 PF01869 BadF/BadG/BcrA/BcrD ATPase family C3496_18220 PF02660 Glycerol-3-phosphate acyltransferase C3496_18225 PF00266 Aminotransferase class-V C3496_18230 PF00291 Pyridoxal-phosphate dependent enzyme C3496_18265 PF00753 Metallo-beta-lactamase superfamily C3496_18265 PF16123 Hydroxyacylglutathione hydrolase C-terminus C3496_18280 PF00271 Helicase conserved C-terminal domain C3496_18280 PF00270 DEAD/DEAH box helicase C3496_18295 PF17932 Tetracyclin repressor-like, C-terminal domain C3496_18295 PF00440 Bacterial regulatory proteins, tetR family C3496_18310 PF12704 MacB-like periplasmic core domain C3496_18310 PF02687 FtsX-like permease family C3496_18310 PF00005 ABC transporter C3496_18315 PF03848 Tellurite resistance protein TehB C3496_18315 PF09313 Domain of unknown function (DUF1971) C3496_18325 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C3496_18325 PF00205 Thiamine pyrophosphate enzyme, central domain C3496_18325 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C3496_18330 PF12802 MarR family C3496_18335 PF00300 Histidine phosphatase superfamily (branch 1) C3496_18345 PF14171 Toxin SpoIISA, type II toxin-antitoxin system C3496_18360 PF07687 Peptidase dimerisation domain C3496_18360 PF01546 Peptidase family M20/M25/M40 C3496_18375 PF00132 Bacterial transferase hexapeptide (six repeats) C3496_18385 PF00905 Penicillin binding protein transpeptidase domain C3496_18385 PF05223 NTF2-like N-terminal transpeptidase domain C3496_18385 PF03717 Penicillin-binding Protein dimerisation domain C3496_18390 PF04542 Sigma-70 region 2 C3496_18390 PF08281 Sigma-70, region 4 C3496_18400 PF03717 Penicillin-binding Protein dimerisation domain C3496_18400 PF00905 Penicillin binding protein transpeptidase domain C3496_18405 PF00905 Penicillin binding protein transpeptidase domain C3496_18405 PF03717 Penicillin-binding Protein dimerisation domain C3496_18420 PF00356 Bacterial regulatory proteins, lacI family C3496_18425 PF07690 Major Facilitator Superfamily C3496_18430 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C3496_18430 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C3496_18435 PF00294 pfkB family carbohydrate kinase C3496_18440 PF00171 Aldehyde dehydrogenase family C3496_18445 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C3496_18445 PF00205 Thiamine pyrophosphate enzyme, central domain C3496_18445 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C3496_18450 PF01261 Xylose isomerase-like TIM barrel C3496_18455 PF01116 Fructose-bisphosphate aldolase class-II C3496_18460 PF04962 KduI/IolB family C3496_18475 PF07486 Cell Wall Hydrolase C3496_18490 PF01757 Acyltransferase family C3496_18510 PF00753 Metallo-beta-lactamase superfamily C3496_18510 PF16123 Hydroxyacylglutathione hydrolase C-terminus C3496_18545 PF03707 Bacterial signalling protein N terminal repeat C3496_18545 PF00563 EAL domain C3496_18545 PF00990 Diguanylate cyclase, GGDEF domain C3496_18555 PF00005 ABC transporter C3496_18570 PF13302 Acetyltransferase (GNAT) domain C3496_18585 PF02743 Cache domain C3496_18585 PF00672 HAMP domain C3496_18585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3496_18600 PF11798 IMS family HHH motif C3496_18600 PF11799 impB/mucB/samB family C-terminal domain C3496_18600 PF00817 impB/mucB/samB family C3496_18630 PF00486 Transcriptional regulatory protein, C terminal C3496_18630 PF00072 Response regulator receiver domain C3496_18635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_18635 PF00512 His Kinase A (phospho-acceptor) domain C3496_18655 PF03009 Glycerophosphoryl diester phosphodiesterase family C3496_18665 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3496_18670 PF00753 Metallo-beta-lactamase superfamily C3496_18685 PF00005 ABC transporter C3496_18695 PF08359 YsiA-like protein, C-terminal region C3496_18695 PF00440 Bacterial regulatory proteins, tetR family C3496_18715 PF02770 Acyl-CoA dehydrogenase, middle domain C3496_18715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C3496_18715 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C3496_18720 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C3496_18720 PF00289 Biotin carboxylase, N-terminal domain C3496_18720 PF02785 Biotin carboxylase C-terminal domain C3496_18725 PF00364 Biotin-requiring enzyme C3496_18730 PF00682 HMGL-like C3496_18735 PF00378 Enoyl-CoA hydratase/isomerase C3496_18740 PF01039 Carboxyl transferase domain C3496_18745 PF00501 AMP-binding enzyme C3496_18745 PF16177 Acetyl-coenzyme A synthetase N-terminus C3496_18745 PF13193 AMP-binding enzyme C-terminal domain C3496_18755 PF00583 Acetyltransferase (GNAT) family C3496_18760 PF00485 Phosphoribulokinase / Uridine kinase family C3496_18770 PF05163 DinB family C3496_18775 PF07943 Penicillin-binding protein 5, C-terminal domain C3496_18775 PF00768 D-alanyl-D-alanine carboxypeptidase C3496_18780 PF00512 His Kinase A (phospho-acceptor) domain C3496_18780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_18785 PF00486 Transcriptional regulatory protein, C terminal C3496_18785 PF00072 Response regulator receiver domain C3496_18790 PF01966 HD domain C3496_18800 PF01048 Phosphorylase superfamily C3496_18805 PF13460 NAD(P)H-binding C3496_18820 PF07504 Fungalysin/Thermolysin Propeptide Motif C3496_18820 PF01447 Thermolysin metallopeptidase, catalytic domain C3496_18820 PF03413 Peptidase propeptide and YPEB domain C3496_18820 PF02868 Thermolysin metallopeptidase, alpha-helical domain C3496_18825 PF12833 Helix-turn-helix domain C3496_18825 PF17853 GGDEF-like domain C3496_18865 PF00144 Beta-lactamase C3496_18870 PF00376 MerR family regulatory protein C3496_18870 PF09278 MerR, DNA binding C3496_18875 PF07690 Major Facilitator Superfamily C3496_18890 PF13847 Methyltransferase domain C3496_18905 PF01636 Phosphotransferase enzyme family C3496_18910 PF12833 Helix-turn-helix domain C3496_18925 PF00392 Bacterial regulatory proteins, gntR family C3496_18925 PF00155 Aminotransferase class I and II C3496_18940 PF00107 Zinc-binding dehydrogenase C3496_18940 PF08240 Alcohol dehydrogenase GroES-like domain C3496_18945 PF04239 Protein of unknown function (DUF421) C3496_18950 PF08241 Methyltransferase domain C3496_18960 PF08450 SMP-30/Gluconolactonase/LRE-like region C3496_18970 PF01921 tRNA synthetases class I (K) C3496_18975 PF07486 Cell Wall Hydrolase C3496_18990 PF00072 Response regulator receiver domain C3496_18990 PF00486 Transcriptional regulatory protein, C terminal C3496_18995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_19000 PF12848 ABC transporter C3496_19000 PF00005 ABC transporter C3496_19015 PF00005 ABC transporter C3496_19020 PF02687 FtsX-like permease family C3496_19040 PF03447 Homoserine dehydrogenase, NAD binding domain C3496_19040 PF00742 Homoserine dehydrogenase C3496_19040 PF01842 ACT domain C3496_19045 PF00155 Aminotransferase class I and II C3496_19045 PF00392 Bacterial regulatory proteins, gntR family C3496_19050 PF07478 D-ala D-ala ligase C-terminus C3496_19050 PF01820 D-ala D-ala ligase N-terminus C3496_19055 PF03070 TENA/THI-4/PQQC family C3496_19155 PF00067 Cytochrome P450 C3496_19165 PF00132 Bacterial transferase hexapeptide (six repeats) C3496_19170 PF07561 Domain of Unknown Function (DUF1540) C3496_19180 PF00067 Cytochrome P450 C3496_19200 PF13188 PAS domain C3496_19200 PF13426 PAS domain C3496_19200 PF00512 His Kinase A (phospho-acceptor) domain C3496_19200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_19200 PF00989 PAS fold C3496_19205 PF03717 Penicillin-binding Protein dimerisation domain C3496_19205 PF00905 Penicillin binding protein transpeptidase domain C3496_19210 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase C3496_19215 PF01177 Asp/Glu/Hydantoin racemase C3496_19220 PF07155 ECF-type riboflavin transporter, S component C3496_19225 PF12558 ATP-binding cassette cobalt transporter C3496_19225 PF00005 ABC transporter C3496_19240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_19240 PF00512 His Kinase A (phospho-acceptor) domain C3496_19250 PF04229 GrpB protein C3496_19255 PF08240 Alcohol dehydrogenase GroES-like domain C3496_19255 PF00107 Zinc-binding dehydrogenase C3496_19260 PF01569 PAP2 superfamily C3496_19265 PF03717 Penicillin-binding Protein dimerisation domain C3496_19265 PF00905 Penicillin binding protein transpeptidase domain C3496_19265 PF03793 PASTA domain C3496_19270 PF08361 MAATS-type transcriptional repressor, C-terminal region C3496_19270 PF00440 Bacterial regulatory proteins, tetR family C3496_19325 PF01965 DJ-1/PfpI family C3496_19335 PF00144 Beta-lactamase C3496_19350 PF07739 TipAS antibiotic-recognition domain C3496_19350 PF13411 MerR HTH family regulatory protein C3496_19360 PF07690 Major Facilitator Superfamily C3496_19380 PF03009 Glycerophosphoryl diester phosphodiesterase family C3496_19400 PF00392 Bacterial regulatory proteins, gntR family C3496_19400 PF00155 Aminotransferase class I and II C3496_19405 PF00892 EamA-like transporter family C3496_19415 PF00293 NUDIX domain C3496_19425 PF00144 Beta-lactamase C3496_19435 PF07690 Major Facilitator Superfamily C3496_19450 PF00293 NUDIX domain C3496_19450 PF09297 NADH pyrophosphatase zinc ribbon domain C3496_19455 PF02768 DNA polymerase III beta subunit, C-terminal domain C3496_19455 PF00712 DNA polymerase III beta subunit, N-terminal domain C3496_19455 PF02767 DNA polymerase III beta subunit, central domain C3496_19460 PF00293 NUDIX domain C3496_19475 PF12706 Beta-lactamase superfamily domain C3496_19495 PF09234 Domain of unknown function (DUF1963) C3496_19515 PF01734 Patatin-like phospholipase C3496_19520 PF08000 Bacterial PH domain C3496_19530 PF12867 DinB superfamily C3496_19545 PF02673 Bacitracin resistance protein BacA C3496_19555 PF01541 GIY-YIG catalytic domain C3496_19600 PF01266 FAD dependent oxidoreductase C3496_19620 PF13419 Haloacid dehalogenase-like hydrolase C3496_19640 PF01569 PAP2 superfamily C3496_19650 PF03714 Bacterial pullanase-associated domain C3496_19650 PF00128 Alpha amylase, catalytic domain C3496_19650 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C3496_19655 PF03413 Peptidase propeptide and YPEB domain C3496_19655 PF01447 Thermolysin metallopeptidase, catalytic domain C3496_19655 PF02868 Thermolysin metallopeptidase, alpha-helical domain C3496_19655 PF07504 Fungalysin/Thermolysin Propeptide Motif C3496_19675 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C3496_19680 PF00344 SecY translocase C3496_19685 PF08299 Bacterial dnaA protein helix-turn-helix C3496_19685 PF11638 DnaA N-terminal domain C3496_19685 PF00308 Bacterial dnaA protein C3496_19690 PF00892 EamA-like transporter family C3496_19695 PF00155 Aminotransferase class I and II C3496_19695 PF00392 Bacterial regulatory proteins, gntR family C3496_19700 PF00561 alpha/beta hydrolase fold C3496_19730 PF06081 Aromatic acid exporter family member 1 C3496_19745 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) C3496_19750 PF03413 Peptidase propeptide and YPEB domain C3496_19750 PF14620 YpeB sporulation C3496_19755 PF01471 Putative peptidoglycan binding domain C3496_19755 PF07486 Cell Wall Hydrolase C3496_19770 PF03301 Tryptophan 2,3-dioxygenase C3496_19775 PF04199 Putative cyclase C3496_19780 PF00266 Aminotransferase class-V C3496_19785 PF00440 Bacterial regulatory proteins, tetR family C3496_19785 PF08359 YsiA-like protein, C-terminal region C3496_19790 PF00293 NUDIX domain C3496_19790 PF13344 Haloacid dehalogenase-like hydrolase C3496_19820 PF02954 Bacterial regulatory protein, Fis family C3496_19820 PF01590 GAF domain C3496_19820 PF00158 Sigma-54 interaction domain C3496_19830 PF13302 Acetyltransferase (GNAT) domain C3496_19835 PF08220 DeoR-like helix-turn-helix domain C3496_19835 PF00455 DeoR C terminal sensor domain C3496_19855 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3496_19855 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C3496_19860 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C3496_19860 PF00364 Biotin-requiring enzyme C3496_19860 PF02817 e3 binding domain C3496_19865 PF02780 Transketolase, C-terminal domain C3496_19865 PF02779 Transketolase, pyrimidine binding domain C3496_19870 PF00676 Dehydrogenase E1 component C3496_19880 PF00106 short chain dehydrogenase C3496_19885 PF13673 Acetyltransferase (GNAT) domain C3496_19885 PF04229 GrpB protein C3496_19920 PF00528 Binding-protein-dependent transport system inner membrane component C3496_19925 PF00005 ABC transporter C3496_19925 PF00571 CBS domain C3496_19930 PF04069 Substrate binding domain of ABC-type glycine betaine transport system C3496_19935 PF00574 Clp protease C3496_19950 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) C3496_19955 PF13673 Acetyltransferase (GNAT) domain C3496_19960 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading C3496_19960 PF18416 N-acetylglucosamine binding protein domain 2 C3496_19965 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase C3496_19970 PF03781 Sulfatase-modifying factor enzyme 1 C3496_19985 PF10990 Protein of unknown function (DUF2809) C3496_19990 PF08241 Methyltransferase domain C3496_20030 PF13538 UvrD-like helicase C-terminal domain C3496_20045 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like C3496_20050 PF00270 DEAD/DEAH box helicase C3496_20050 PF09382 RQC domain C3496_20050 PF00570 HRDC domain C3496_20050 PF16124 RecQ zinc-binding C3496_20050 PF00271 Helicase conserved C-terminal domain C3496_20100 PF01368 DHH family C3496_20100 PF02833 DHHA2 domain C3496_20105 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading C3496_20105 PF18416 N-acetylglucosamine binding protein domain 2 C3496_20120 PF02627 Carboxymuconolactone decarboxylase family C3496_20125 PF01235 Sodium:alanine symporter family C3496_20130 PF00171 Aldehyde dehydrogenase family C3496_20135 PF00701 Dihydrodipicolinate synthetase family C3496_20140 PF05544 Proline racemase C3496_20145 PF05544 Proline racemase C3496_20150 PF01266 FAD dependent oxidoreductase C3496_20155 PF00158 Sigma-54 interaction domain C3496_20155 PF02954 Bacterial regulatory protein, Fis family C3496_20155 PF13188 PAS domain C3496_20160 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3496_20160 PF04324 BFD-like [2Fe-2S] binding domain C3496_20170 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3496_20170 PF04324 BFD-like [2Fe-2S] binding domain C3496_20185 PF08876 Domain of unknown function (DUF1836) C3496_20190 PF09335 SNARE associated Golgi protein C3496_20205 PF04914 DltD protein C3496_20215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C3496_20220 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain C3496_20220 PF00877 NlpC/P60 family C3496_20225 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C3496_20225 PF13378 Enolase C-terminal domain-like C3496_20240 PF01965 DJ-1/PfpI family C3496_20245 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C3496_20275 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain C3496_20275 PF02129 X-Pro dipeptidyl-peptidase (S15 family) C3496_20280 PF16736 Single Cache-like C3496_20280 PF00989 PAS fold C3496_20280 PF00512 His Kinase A (phospho-acceptor) domain C3496_20280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_20285 PF00072 Response regulator receiver domain C3496_20285 PF00486 Transcriptional regulatory protein, C terminal C3496_20305 PF01048 Phosphorylase superfamily C3496_20310 PF03808 Glycosyl transferase WecB/TagA/CpsF family C3496_20315 PF01432 Peptidase family M3 C3496_20315 PF08439 Oligopeptidase F C3496_20320 PF13520 Amino acid permease C3496_20325 PF01037 Lrp/AsnC ligand binding domain C3496_20340 PF02645 Uncharacterised protein, DegV family COG1307 C3496_20370 PF07690 Major Facilitator Superfamily C3496_20380 PF04519 Polymer-forming cytoskeletal C3496_20385 PF13171 Protein of unknown function (DUF4004) C3496_20390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C3496_20390 PF12793 Sugar transport-related sRNA regulator N-term C3496_20395 PF07690 Major Facilitator Superfamily C3496_20415 PF04226 Transglycosylase associated protein C3496_20420 PF01156 Inosine-uridine preferring nucleoside hydrolase C3496_20430 PF08241 Methyltransferase domain C3496_20470 PF00155 Aminotransferase class I and II C3496_20475 PF07977 FabA-like domain C3496_20480 PF03630 Fumble C3496_20500 PF00005 ABC transporter C3496_20555 PF01594 AI-2E family transporter C3496_20570 PF00296 Luciferase-like monooxygenase C3496_20575 PF00528 Binding-protein-dependent transport system inner membrane component C3496_20580 PF09084 NMT1/THI5 like C3496_20585 PF00005 ABC transporter C3496_20595 PF13344 Haloacid dehalogenase-like hydrolase C3496_20595 PF00293 NUDIX domain C3496_20615 PF02522 Aminoglycoside 3-N-acetyltransferase C3496_20640 PF13536 Putative multidrug resistance efflux transporter C3496_20645 PF12867 DinB superfamily C3496_20665 PF08713 DNA alkylation repair enzyme C3496_20670 PF01522 Polysaccharide deacetylase C3496_20675 PF03611 PTS system sugar-specific permease component C3496_20685 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C3496_20690 PF03741 Integral membrane protein TerC family C3496_20695 PF00884 Sulfatase C3496_20705 PF00005 ABC transporter C3496_20705 PF12848 ABC transporter C3496_20715 PF03176 MMPL family C3496_20720 PF00440 Bacterial regulatory proteins, tetR family C3496_20720 PF16295 Tetracyclin repressor-like, C-terminal domain C3496_20730 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C3496_20735 PF02153 Prephenate dehydrogenase C3496_20735 PF01842 ACT domain C3496_20740 PF00155 Aminotransferase class I and II C3496_20745 PF01264 Chorismate synthase C3496_20755 PF00793 DAHP synthetase I family C3496_20755 PF01817 Chorismate mutase type II C3496_20780 PF01636 Phosphotransferase enzyme family C3496_20795 PF06725 3D domain C3496_20795 PF01476 LysM domain C3496_20810 PF00378 Enoyl-CoA hydratase/isomerase C3496_20815 PF00501 AMP-binding enzyme C3496_20815 PF13193 AMP-binding enzyme C-terminal domain C3496_20820 PF00158 Sigma-54 interaction domain C3496_20820 PF00989 PAS fold C3496_20820 PF02954 Bacterial regulatory protein, Fis family C3496_20830 PF06039 Malate:quinone oxidoreductase (Mqo) C3496_20835 PF13407 Periplasmic binding protein domain C3496_20840 PF02653 Branched-chain amino acid transport system / permease component C3496_20845 PF02653 Branched-chain amino acid transport system / permease component C3496_20850 PF00005 ABC transporter C3496_20855 PF04198 Putative sugar-binding domain C3496_20855 PF00325 Bacterial regulatory proteins, crp family C3496_20860 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C3496_20860 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C3496_20870 PF01791 DeoC/LacD family aldolase C3496_20895 PF03992 Antibiotic biosynthesis monooxygenase C3496_20915 PF07662 Na+ dependent nucleoside transporter C-terminus C3496_20915 PF01773 Na+ dependent nucleoside transporter N-terminus C3496_20920 PF00171 Aldehyde dehydrogenase family C3496_20925 PF01472 PUA domain C3496_20925 PF00696 Amino acid kinase family C3496_20935 PF14748 Pyrroline-5-carboxylate reductase dimerisation C3496_20935 PF03807 NADP oxidoreductase coenzyme F420-dependent C3496_20950 PF01546 Peptidase family M20/M25/M40 C3496_20955 PF01614 Bacterial transcriptional regulator C3496_20955 PF09339 IclR helix-turn-helix domain C3496_20960 PF00324 Amino acid permease C3496_20965 PF01139 tRNA-splicing ligase RtcB C3496_20970 PF00487 Fatty acid desaturase C3496_20975 PF00245 Alkaline phosphatase C3496_20980 PF11188 Protein of unknown function (DUF2975) C3496_20985 PF13443 Cro/C1-type HTH DNA-binding domain C3496_21000 PF10086 YhfC intramembrane metalloprotease C3496_21010 PF00072 Response regulator receiver domain C3496_21010 PF04397 LytTr DNA-binding domain C3496_21020 PF13302 Acetyltransferase (GNAT) domain C3496_21025 PF12681 Glyoxalase-like domain C3496_21050 PF07726 ATPase family associated with various cellular activities (AAA) C3496_21050 PF17863 AAA lid domain C3496_21065 PF07690 Major Facilitator Superfamily C3496_21075 PF00535 Glycosyl transferase family 2 C3496_21090 PF00535 Glycosyl transferase family 2 C3496_21095 PF00535 Glycosyl transferase family 2 C3496_21105 PF00202 Aminotransferase class-III C3496_21110 PF06628 Catalase-related immune-responsive C3496_21110 PF00199 Catalase C3496_21120 PF13382 Adenine deaminase C-terminal domain C3496_21120 PF01979 Amidohydrolase family C3496_21130 PF01810 LysE type translocator C3496_21135 PF08892 YqcI/YcgG family C3496_21145 PF00144 Beta-lactamase C3496_21170 PF00881 Nitroreductase family C3496_21175 PF01047 MarR family C3496_21185 PF00009 Elongation factor Tu GTP binding domain C3496_21185 PF03764 Elongation factor G, domain IV C3496_21185 PF14492 Elongation Factor G, domain II C3496_21185 PF00679 Elongation factor G C-terminus C3496_21195 PF00293 NUDIX domain C3496_21200 PF05406 WGR domain C3496_21210 PF00005 ABC transporter C3496_21235 PF12833 Helix-turn-helix domain C3496_21240 PF00583 Acetyltransferase (GNAT) family C3496_21255 PF00892 EamA-like transporter family C3496_21260 PF00392 Bacterial regulatory proteins, gntR family C3496_21260 PF00155 Aminotransferase class I and II C3496_21265 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 C3496_21270 PF13031 Protein of unknown function (DUF3892) C3496_21305 PF01925 Sulfite exporter TauE/SafE C3496_21310 PF13302 Acetyltransferase (GNAT) domain C3496_21315 PF00324 Amino acid permease C3496_21325 PF08713 DNA alkylation repair enzyme C3496_21330 PF13411 MerR HTH family regulatory protein C3496_21330 PF06445 GyrI-like small molecule binding domain C3496_21345 PF00293 NUDIX domain C3496_21355 PF10502 Signal peptidase, peptidase S26 C3496_21360 PF03717 Penicillin-binding Protein dimerisation domain C3496_21360 PF00905 Penicillin binding protein transpeptidase domain C3496_21370 PF02146 Sir2 family C3496_21375 PF01470 Pyroglutamyl peptidase C3496_21390 PF03746 LamB/YcsF family C3496_21395 PF02626 Carboxyltransferase domain, subdomain A and B C3496_21400 PF02682 Carboxyltransferase domain, subdomain C and D C3496_21405 PF09339 IclR helix-turn-helix domain C3496_21405 PF01614 Bacterial transcriptional regulator C3496_21410 PF10502 Signal peptidase, peptidase S26 C3496_21415 PF03932 CutC family C3496_21420 PF07454 Stage II sporulation protein P (SpoIIP) C3496_21440 PF02770 Acyl-CoA dehydrogenase, middle domain C3496_21440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C3496_21440 PF08028 Acyl-CoA dehydrogenase, C-terminal domain C3496_21455 PF07670 Nucleoside recognition C3496_21465 PF02915 Rubrerythrin C3496_21475 PF00440 Bacterial regulatory proteins, tetR family C3496_21480 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain C3496_21480 PF00391 PEP-utilising enzyme, mobile domain C3496_21490 PF00753 Metallo-beta-lactamase superfamily C3496_21495 PF07875 Coat F domain C3496_21505 PF08892 YqcI/YcgG family C3496_21510 PF01810 LysE type translocator C3496_21515 PF00324 Amino acid permease C3496_21525 PF00269 Small, acid-soluble spore proteins, alpha/beta type C3496_21530 PF10710 Protein of unknown function (DUF2512) C3496_21535 PF11553 Protein of unknown function (DUF3231) C3496_21540 PF00269 Small, acid-soluble spore proteins, alpha/beta type C3496_21545 PF08240 Alcohol dehydrogenase GroES-like domain C3496_21545 PF13823 Alcohol dehydrogenase GroES-associated C3496_21545 PF00107 Zinc-binding dehydrogenase C3496_21555 PF00206 Lyase C3496_21555 PF10415 Fumarase C C-terminus C3496_21560 PF00710 Asparaginase, N-terminal C3496_21560 PF17763 Glutaminase/Asparaginase C-terminal domain C3496_21565 PF01381 Helix-turn-helix C3496_21570 PF13333 Integrase core domain C3496_21570 PF00665 Integrase core domain C3496_21570 PF13276 HTH-like domain C3496_21575 PF02151 UvrB/uvrC motif C3496_21575 PF08459 UvrC Helix-hairpin-helix N-terminal C3496_21575 PF12826 Helix-hairpin-helix motif C3496_21575 PF01541 GIY-YIG catalytic domain C3496_21580 PF13520 Amino acid permease C3496_21585 PF03807 NADP oxidoreductase coenzyme F420-dependent C3496_21585 PF14748 Pyrroline-5-carboxylate reductase dimerisation C3496_21595 PF08664 YcbB domain C3496_21595 PF00072 Response regulator receiver domain C3496_21600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_21605 PF04960 Glutaminase C3496_21610 PF01235 Sodium:alanine symporter family C3496_21640 PF02872 5'-nucleotidase, C-terminal domain C3496_21640 PF17936 Bacterial Ig domain C3496_21640 PF00149 Calcineurin-like phosphoesterase C3496_21645 PF06628 Catalase-related immune-responsive C3496_21645 PF00199 Catalase C3496_21650 PF00561 alpha/beta hydrolase fold C3496_21655 PF00857 Isochorismatase family C3496_21670 PF01979 Amidohydrolase family C3496_21675 PF03466 LysR substrate binding domain C3496_21675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3496_21705 PF11181 Heat induced stress protein YflT C3496_21750 PF03073 TspO/MBR family C3496_21755 PF03441 FAD binding domain of DNA photolyase C3496_21755 PF00875 DNA photolyase C3496_21765 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) C3496_21770 PF00361 Proton-conducting membrane transporter C3496_21770 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C3496_21775 PF10057 Uncharacterized conserved protein (DUF2294) C3496_21795 PF01040 UbiA prenyltransferase family C3496_21800 PF00561 alpha/beta hydrolase fold C3496_21805 PF12996 DUF based on E. rectale Gene description (DUF3880) C3496_21810 PF00005 ABC transporter C3496_21815 PF02687 FtsX-like permease family C3496_21825 PF04397 LytTr DNA-binding domain C3496_21825 PF00072 Response regulator receiver domain C3496_21860 PF01451 Low molecular weight phosphotyrosine protein phosphatase C3496_21865 PF01758 Sodium Bile acid symporter family C3496_21870 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C3496_21875 PF01022 Bacterial regulatory protein, arsR family C3496_21890 PF00012 Hsp70 protein C3496_21925 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C3496_21945 PF02805 Metal binding domain of Ada C3496_21945 PF12833 Helix-turn-helix domain C3496_21955 PF00144 Beta-lactamase C3496_21980 PF12802 MarR family C3496_21985 PF00067 Cytochrome P450 C3496_21985 PF00175 Oxidoreductase NAD-binding domain C3496_21985 PF00667 FAD binding domain C3496_21985 PF00258 Flavodoxin C3496_21995 PF07690 Major Facilitator Superfamily C3496_22055 PF00291 Pyridoxal-phosphate dependent enzyme C3496_22065 PF00144 Beta-lactamase C3496_22080 PF00753 Metallo-beta-lactamase superfamily C3496_22085 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family C3496_22095 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C3496_22095 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C3496_22100 PF04072 Leucine carboxyl methyltransferase C3496_22115 PF00005 ABC transporter C3496_22120 PF02687 FtsX-like permease family C3496_22135 PF00512 His Kinase A (phospho-acceptor) domain C3496_22135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_22135 PF00672 HAMP domain C3496_22140 PF00486 Transcriptional regulatory protein, C terminal C3496_22140 PF00072 Response regulator receiver domain C3496_22145 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) C3496_22145 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 C3496_22150 PF07690 Major Facilitator Superfamily C3496_22155 PF02589 LUD domain C3496_22160 PF02589 LUD domain C3496_22160 PF11870 Domain of unknown function (DUF3390) C3496_22160 PF13183 4Fe-4S dicluster domain C3496_22165 PF02754 Cysteine-rich domain C3496_22170 PF03466 LysR substrate binding domain C3496_22170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3496_22190 PF02016 LD-carboxypeptidase N-terminal domain C3496_22190 PF17676 LD-carboxypeptidase C-terminal domain C3496_22210 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C3496_22210 PF01842 ACT domain C3496_22210 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C3496_22215 PF00266 Aminotransferase class-V C3496_22230 PF07883 Cupin domain C3496_22240 PF01497 Periplasmic binding protein C3496_22240 PF12833 Helix-turn-helix domain C3496_22255 PF04740 LXG domain of WXG superfamily C3496_22255 PF14436 Bacterial EndoU nuclease C3496_22265 PF01804 Penicillin amidase C3496_22280 PF01510 N-acetylmuramoyl-L-alanine amidase C3496_22280 PF01476 LysM domain C3496_22280 PF01471 Putative peptidoglycan binding domain C3496_22315 PF14044 NETI protein C3496_22320 PF07690 Major Facilitator Superfamily C3496_22330 PF12697 Alpha/beta hydrolase family C3496_22335 PF01047 MarR family C3496_22340 PF07690 Major Facilitator Superfamily C3496_22350 PF17314 Family of unknown function (DUF5360) C3496_22355 PF00893 Small Multidrug Resistance protein C3496_22360 PF00440 Bacterial regulatory proteins, tetR family C3496_22365 PF17440 Thiol-activated cytolysin beta sandwich domain C3496_22365 PF01289 Thiol-activated cytolysin C3496_22370 PF02667 Short chain fatty acid transporter C3496_22380 PF02525 Flavodoxin-like fold C3496_22400 PF14256 YwiC-like protein C3496_22410 PF00005 ABC transporter C3496_22415 PF02361 Cobalt transport protein C3496_22430 PF03737 Aldolase/RraA C3496_22435 PF03606 C4-dicarboxylate anaerobic carrier C3496_22455 PF07739 TipAS antibiotic-recognition domain C3496_22455 PF13411 MerR HTH family regulatory protein C3496_22505 PF04073 Aminoacyl-tRNA editing domain C3496_22510 PF03129 Anticodon binding domain C3496_22510 PF13393 Histidyl-tRNA synthetase C3496_22520 PF01638 HxlR-like helix-turn-helix C3496_22525 PF00881 Nitroreductase family C3496_22535 PF00391 PEP-utilising enzyme, mobile domain C3496_22535 PF00224 Pyruvate kinase, barrel domain C3496_22535 PF02887 Pyruvate kinase, alpha/beta domain C3496_22560 PF00005 ABC transporter C3496_22590 PF13419 Haloacid dehalogenase-like hydrolase C3496_22600 PF13350 Tyrosine phosphatase family C3496_22620 PF13344 Haloacid dehalogenase-like hydrolase C3496_22620 PF00293 NUDIX domain C3496_22630 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C3496_22635 PF00480 ROK family C3496_22640 PF07690 Major Facilitator Superfamily C3496_22645 PF12464 Maltose acetyltransferase C3496_22645 PF14602 Hexapeptide repeat of succinyl-transferase C3496_22655 PF02687 FtsX-like permease family C3496_22655 PF00005 ABC transporter C3496_22655 PF12704 MacB-like periplasmic core domain C3496_22665 PF00579 tRNA synthetases class I (W and Y) C3496_22670 PF13288 DXP reductoisomerase C-terminal domain C3496_22670 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase C3496_22670 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain C3496_22675 PF01594 AI-2E family transporter C3496_22695 PF08241 Methyltransferase domain C3496_22725 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) C3496_22735 PF03471 Transporter associated domain C3496_22735 PF00571 CBS domain C3496_22735 PF01595 Cyclin M transmembrane N-terminal domain C3496_22740 PF13411 MerR HTH family regulatory protein C3496_22750 PF00483 Nucleotidyl transferase C3496_22755 PF16363 GDP-mannose 4,6 dehydratase C3496_22760 PF08421 Putative zinc binding domain C3496_22760 PF08484 C-methyltransferase C-terminal domain C3496_22765 PF01370 NAD dependent epimerase/dehydratase family C3496_22780 PF00892 EamA-like transporter family C3496_22785 PF00805 Pentapeptide repeats (8 copies) C3496_22790 PF06906 Protein of unknown function (DUF1272) C3496_22795 PF10282 Lactonase, 7-bladed beta-propeller C3496_22800 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C3496_22800 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C3496_22805 PF02447 GntP family permease C3496_22810 PF00923 Transaldolase/Fructose-6-phosphate aldolase C3496_22815 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain C3496_22815 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C3496_22820 PF02779 Transketolase, pyrimidine binding domain C3496_22820 PF02780 Transketolase, C-terminal domain C3496_22820 PF00456 Transketolase, thiamine diphosphate binding domain C3496_22825 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain C3496_22825 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain C3496_22830 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain C3496_22830 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain C3496_22835 PF08240 Alcohol dehydrogenase GroES-like domain C3496_22835 PF00107 Zinc-binding dehydrogenase C3496_22840 PF00296 Luciferase-like monooxygenase C3496_22850 PF14765 Polyketide synthase dehydratase C3496_22850 PF02801 Beta-ketoacyl synthase, C-terminal domain C3496_22850 PF08659 KR domain C3496_22850 PF00109 Beta-ketoacyl synthase, N-terminal domain C3496_22850 PF16197 Ketoacyl-synthetase C-terminal extension C3496_22850 PF00107 Zinc-binding dehydrogenase C3496_22850 PF08240 Alcohol dehydrogenase GroES-like domain C3496_22850 PF00698 Acyl transferase domain C3496_22850 PF00550 Phosphopantetheine attachment site C3496_22860 PF00106 short chain dehydrogenase C3496_22865 PF07504 Fungalysin/Thermolysin Propeptide Motif C3496_22865 PF02868 Thermolysin metallopeptidase, alpha-helical domain C3496_22865 PF01447 Thermolysin metallopeptidase, catalytic domain C3496_22865 PF03413 Peptidase propeptide and YPEB domain C3496_22875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3496_22875 PF00672 HAMP domain C3496_22875 PF12729 Four helix bundle sensory module for signal transduction C3496_22880 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) C3496_22885 PF01872 RibD C-terminal domain C3496_22885 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C3496_22890 PF00925 GTP cyclohydrolase II C3496_22890 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C3496_22895 PF01638 HxlR-like helix-turn-helix C3496_22900 PF00144 Beta-lactamase C3496_22910 PF03928 Haem-degrading C3496_22925 PF01609 Transposase DDE domain C3496_22955 PF03960 ArsC family C3496_22965 PF01638 HxlR-like helix-turn-helix C3496_22970 PF07702 UTRA domain C3496_22970 PF00392 Bacterial regulatory proteins, gntR family C3496_22975 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C3496_22975 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C3496_22985 PF01638 HxlR-like helix-turn-helix C3496_22990 PF01638 HxlR-like helix-turn-helix C3496_22995 PF00248 Aldo/keto reductase family C3496_23030 PF02567 Phenazine biosynthesis-like protein C3496_23050 PF13302 Acetyltransferase (GNAT) domain C3496_23055 PF00501 AMP-binding enzyme C3496_23055 PF13193 AMP-binding enzyme C-terminal domain C3496_23060 PF02525 Flavodoxin-like fold C3496_23065 PF01638 HxlR-like helix-turn-helix C3496_23070 PF01022 Bacterial regulatory protein, arsR family C3496_23075 PF01522 Polysaccharide deacetylase C3496_23080 PF12791 Anti-sigma factor N-terminus C3496_23085 PF04542 Sigma-70 region 2 C3496_23100 PF00440 Bacterial regulatory proteins, tetR family C3496_23120 PF05656 Protein of unknown function (DUF805) C3496_23125 PF01061 ABC-2 type transporter C3496_23130 PF13732 Domain of unknown function (DUF4162) C3496_23130 PF00005 ABC transporter C3496_23150 PF03063 Prismane/CO dehydrogenase family C3496_23165 PF00753 Metallo-beta-lactamase superfamily C3496_23170 PF01183 Glycosyl hydrolases family 25 C3496_23170 PF01471 Putative peptidoglycan binding domain C3496_23195 PF00144 Beta-lactamase C3496_23250 PF17863 AAA lid domain C3496_23250 PF07726 ATPase family associated with various cellular activities (AAA) C3496_23265 PF00005 ABC transporter C3496_23285 PF00753 Metallo-beta-lactamase superfamily C3496_23290 PF08240 Alcohol dehydrogenase GroES-like domain C3496_23290 PF00107 Zinc-binding dehydrogenase C3496_23295 PF00324 Amino acid permease C3496_23300 PF07690 Major Facilitator Superfamily C3496_23330 PF02585 GlcNAc-PI de-N-acetylase C3496_23335 PF08830 Protein of unknown function (DUF1806) C3496_23340 PF03600 Citrate transporter C3496_23350 PF01497 Periplasmic binding protein C3496_23355 PF01032 FecCD transport family C3496_23360 PF01032 FecCD transport family C3496_23365 PF05675 Protein of unknown function (DUF817) C3496_23370 PF02567 Phenazine biosynthesis-like protein C3496_23375 PF13170 Protein of unknown function (DUF4003) C3496_23395 PF10901 Protein of unknown function (DUF2690) C3496_23405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3496_23405 PF03466 LysR substrate binding domain C3496_23410 PF08240 Alcohol dehydrogenase GroES-like domain C3496_23410 PF00107 Zinc-binding dehydrogenase C3496_23415 PF17827 PrmC N-terminal domain C3496_23415 PF05175 Methyltransferase small domain C3496_23430 PF00488 MutS domain V C3496_23430 PF01713 Smr domain C3496_23440 PF00128 Alpha amylase, catalytic domain C3496_23440 PF09154 Domain of unknown function (DUF1939) C3496_23445 PF00797 N-acetyltransferase C3496_23450 PF01432 Peptidase family M3 C3496_23450 PF08439 Oligopeptidase F C3496_23455 PF00144 Beta-lactamase C3496_23465 PF07690 Major Facilitator Superfamily C3496_23470 PF03466 LysR substrate binding domain C3496_23470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3496_23480 PF03009 Glycerophosphoryl diester phosphodiesterase family C3496_23500 PF01494 FAD binding domain C3496_23505 PF01022 Bacterial regulatory protein, arsR family C3496_23510 PF00107 Zinc-binding dehydrogenase C3496_23510 PF08240 Alcohol dehydrogenase GroES-like domain C3496_23515 PF02696 Uncharacterized ACR, YdiU/UPF0061 family C3496_23520 PF18801 response regulator aspartate phosphatase H, N terminal C3496_23530 PF04299 Putative FMN-binding domain C3496_23545 PF01758 Sodium Bile acid symporter family C3496_23550 PF02913 FAD linked oxidases, C-terminal domain C3496_23550 PF01565 FAD binding domain C3496_23580 PF00132 Bacterial transferase hexapeptide (six repeats) C3496_23585 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C3496_23590 PF00535 Glycosyl transferase family 2 C3496_23595 PF00378 Enoyl-CoA hydratase/isomerase C3496_23600 PF01752 Collagenase C3496_23600 PF08453 Peptidase family M9 N-terminal C3496_23600 PF18496 Collagenase G catalytic helper subdomain C3496_23605 PF02308 MgtC family C3496_23620 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C3496_23625 PF04294 VanW like protein C3496_23635 PF13037 Domain of unknown function (DUF3898) C3496_23635 PF13039 Protein of unknown function (DUF3900) C3496_23655 PF00313 'Cold-shock' DNA-binding domain C3496_23665 PF00258 Flavodoxin C3496_23685 PF00132 Bacterial transferase hexapeptide (six repeats) C3496_23695 PF00106 short chain dehydrogenase C3496_23705 PF00206 Lyase C3496_23705 PF14698 Argininosuccinate lyase C-terminal C3496_23715 PF01156 Inosine-uridine preferring nucleoside hydrolase C3496_23720 PF00474 Sodium:solute symporter family C3496_23730 PF00171 Aldehyde dehydrogenase family C3496_23740 PF14151 YfhD-like protein C3496_23745 PF13249 Squalene-hopene cyclase N-terminal domain C3496_23745 PF13243 Squalene-hopene cyclase C-terminal domain C3496_23750 PF02681 Divergent PAP2 family C3496_23755 PF00892 EamA-like transporter family C3496_23760 PF06961 Protein of unknown function (DUF1294) C3496_23775 PF10609 NUBPL iron-transfer P-loop NTPase C3496_23785 PF02391 MoaE protein C3496_23790 PF03454 MoeA C-terminal region (domain IV) C3496_23790 PF00994 Probable molybdopterin binding domain C3496_23790 PF03453 MoeA N-terminal region (domain I and II) C3496_23795 PF00899 ThiF family C3496_23800 PF01226 Formate/nitrite transporter C3496_23810 PF04055 Radical SAM superfamily C3496_23810 PF06463 Molybdenum Cofactor Synthesis C C3496_23815 PF02634 FdhD/NarQ family C3496_23820 PF10057 Uncharacterized conserved protein (DUF2294) C3496_23825 PF07849 Protein of unknown function (DUF1641) C3496_23830 PF00037 4Fe-4S binding domain C3496_23830 PF00384 Molybdopterin oxidoreductase C3496_23830 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C3496_23830 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C3496_23830 PF01568 Molydopterin dinucleotide binding domain C3496_23840 PF03323 Bacillus/Clostridium GerA spore germination protein C3496_23890 PF08241 Methyltransferase domain C3496_23900 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C3496_23905 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C3496_23910 PF00375 Sodium:dicarboxylate symporter family C3496_23915 PF03816 Cell envelope-related transcriptional attenuator domain C3496_23925 PF04542 Sigma-70 region 2 C3496_23925 PF08281 Sigma-70, region 4 C3496_23940 PF00005 ABC transporter C3496_23940 PF13732 Domain of unknown function (DUF4162) C3496_23950 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C3496_23950 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C3496_23955 PF03989 DNA gyrase C-terminal domain, beta-propeller C3496_23955 PF00521 DNA gyrase/topoisomerase IV, subunit A C3496_23960 PF01751 Toprim domain C3496_23960 PF00204 DNA gyrase B C3496_23960 PF00986 DNA gyrase B subunit, carboxyl terminus C3496_23960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_23970 PF13380 CoA binding domain C3496_23975 PF13180 PDZ domain C3496_23980 PF00072 Response regulator receiver domain C3496_23980 PF00486 Transcriptional regulatory protein, C terminal C3496_23985 PF04055 Radical SAM superfamily C3496_23990 PF13597 Anaerobic ribonucleoside-triphosphate reductase C3496_23990 PF03477 ATP cone domain C3496_23995 PF02660 Glycerol-3-phosphate acyltransferase C3496_24000 PF01521 Iron-sulphur cluster biosynthesis C3496_24005 PF03061 Thioesterase superfamily C3496_24010 PF00704 Glycosyl hydrolases family 18 C3496_24010 PF01476 LysM domain C3496_24020 PF08177 Small acid-soluble spore protein N family C3496_24025 PF13040 Fur-regulated basic protein B C3496_24030 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C3496_24030 PF00929 Exonuclease C3496_24030 PF01336 OB-fold nucleic acid binding domain C3496_24030 PF02811 PHP domain C3496_24030 PF11490 DNA polymerase III polC-type N-terminus II C3496_24030 PF14579 Helix-hairpin-helix motif C3496_24030 PF07733 Bacterial DNA polymerase III alpha NTPase domain C3496_24040 PF00578 AhpC/TSA family C3496_24055 PF00694 Aconitase C-terminal domain C3496_24055 PF00330 Aconitase family (aconitate hydratase) C3496_24065 PF01522 Polysaccharide deacetylase C3496_24075 PF08179 Small acid-soluble spore protein P family C3496_24085 PF07690 Major Facilitator Superfamily C3496_24095 PF02272 DHHA1 domain C3496_24095 PF01411 tRNA synthetases class II (A) C3496_24095 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C3496_24100 PF13344 Haloacid dehalogenase-like hydrolase C3496_24100 PF00293 NUDIX domain C3496_24110 PF00108 Thiolase, N-terminal domain C3496_24110 PF02803 Thiolase, C-terminal domain C3496_24115 PF13193 AMP-binding enzyme C-terminal domain C3496_24115 PF00501 AMP-binding enzyme C3496_24120 PF02632 BioY family C3496_24125 PF00501 AMP-binding enzyme C3496_24125 PF13193 AMP-binding enzyme C-terminal domain C3496_24135 PF00005 ABC transporter C3496_24140 PF01381 Helix-turn-helix C3496_24160 PF05532 CsbD-like C3496_24190 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 C3496_24190 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) C3496_24205 PF13188 PAS domain C3496_24205 PF00989 PAS fold C3496_24205 PF00512 His Kinase A (phospho-acceptor) domain C3496_24205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_24205 PF13426 PAS domain C3496_24210 PF01738 Dienelactone hydrolase family C3496_24215 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C3496_24220 PF00474 Sodium:solute symporter family C3496_24225 PF01645 Conserved region in glutamate synthase C3496_24230 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C3496_24235 PF02559 CarD-like/TRCF domain C3496_24240 PF00491 Arginase family C3496_24245 PF01979 Amidohydrolase family C3496_24250 PF17392 Urocanase C-terminal domain C3496_24250 PF17391 Urocanase N-terminal domain C3496_24250 PF01175 Urocanase Rossmann-like domain C3496_24255 PF00221 Aromatic amino acid lyase C3496_24260 PF09021 HutP C3496_24290 PF11084 Protein of unknown function (DUF2621) C3496_24305 PF07301 Protein of unknown function (DUF1453) C3496_24310 PF02683 Cytochrome C biogenesis protein transmembrane region C3496_24325 PF01546 Peptidase family M20/M25/M40 C3496_24325 PF07687 Peptidase dimerisation domain C3496_24335 PF00005 ABC transporter C3496_24345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3496_24345 PF03466 LysR substrate binding domain C3496_24350 PF03788 LrgA family C3496_24355 PF04172 LrgB-like family C3496_24360 PF13344 Haloacid dehalogenase-like hydrolase C3496_24360 PF00293 NUDIX domain C3496_24370 PF01925 Sulfite exporter TauE/SafE C3496_24395 PF00664 ABC transporter transmembrane region C3496_24395 PF00005 ABC transporter C3496_24400 PF00005 ABC transporter C3496_24400 PF00664 ABC transporter transmembrane region C3496_24405 PF03672 Uncharacterised protein family (UPF0154) C3496_24410 PF10747 Sporulation inhibitor of replication protein SirA C3496_24415 PF02779 Transketolase, pyrimidine binding domain C3496_24415 PF02780 Transketolase, C-terminal domain C3496_24415 PF00456 Transketolase, thiamine diphosphate binding domain C3496_24425 PF00528 Binding-protein-dependent transport system inner membrane component C3496_24430 PF00528 Binding-protein-dependent transport system inner membrane component C3496_24435 PF00005 ABC transporter C3496_24445 PF02872 5'-nucleotidase, C-terminal domain C3496_24445 PF00149 Calcineurin-like phosphoesterase C3496_24450 PF05979 Bacterial protein of unknown function (DUF896) C3496_24455 PF00239 Resolvase, N terminal domain C3496_24460 PF01726 LexA DNA binding domain C3496_24460 PF00717 Peptidase S24-like C3496_24475 PF03551 Transcriptional regulator PadR-like family C3496_24485 PF01183 Glycosyl hydrolases family 25 C3496_24490 PF10145 Phage-related minor tail protein C3496_24490 PF01464 Transglycosylase SLT domain C3496_24490 PF01551 Peptidase family M23 C3496_24525 PF01726 LexA DNA binding domain C3496_24525 PF00717 Peptidase S24-like C3496_24530 PF03951 Glutamine synthetase, beta-Grasp domain C3496_24530 PF00120 Glutamine synthetase, catalytic domain C3496_24535 PF13411 MerR HTH family regulatory protein C3496_24540 PF06838 Methionine gamma-lyase C3496_24545 PF01926 50S ribosome-binding GTPase C3496_24545 PF16360 GTP-binding GTPase Middle Region C3496_24545 PF13167 GTP-binding GTPase N-terminal C3496_24550 PF03458 UPF0126 domain C3496_24555 PF00004 ATPase family associated with various cellular activities (AAA) C3496_24555 PF17866 AAA lid domain C3496_24570 PF17209 Hfq protein C3496_24585 PF06725 3D domain C3496_24585 PF01476 LysM domain C3496_24595 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C3496_24595 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C3496_24600 PF00294 pfkB family carbohydrate kinase C3496_24605 PF08220 DeoR-like helix-turn-helix domain C3496_24605 PF00455 DeoR C terminal sensor domain C3496_24610 PF00465 Iron-containing alcohol dehydrogenase C3496_24615 PF04238 Protein of unknown function (DUF420) C3496_24630 PF00324 Amino acid permease C3496_24640 PF00704 Glycosyl hydrolases family 18 C3496_24640 PF00041 Fibronectin type III domain C3496_24650 PF00149 Calcineurin-like phosphoesterase C3496_24650 PF10518 TAT (twin-arginine translocation) pathway signal sequence C3496_24655 PF01226 Formate/nitrite transporter C3496_24660 PF00216 Bacterial DNA-binding protein C3496_24670 PF00403 Heavy-metal-associated domain C3496_24675 PF00403 Heavy-metal-associated domain C3496_24680 PF02583 Metal-sensitive transcriptional repressor C3496_24690 PF00756 Putative esterase C3496_24695 PF00005 ABC transporter C3496_24700 PF01032 FecCD transport family C3496_24705 PF01032 FecCD transport family C3496_24710 PF01497 Periplasmic binding protein C3496_24715 PF03372 Endonuclease/Exonuclease/phosphatase family C3496_24720 PF02805 Metal binding domain of Ada C3496_24720 PF12833 Helix-turn-helix domain C3496_24725 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C3496_24725 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C3496_24730 PF00730 HhH-GPD superfamily base excision DNA repair protein C3496_24730 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain C3496_24735 PF07687 Peptidase dimerisation domain C3496_24735 PF01546 Peptidase family M20/M25/M40 C3496_24755 PF00561 alpha/beta hydrolase fold C3496_24760 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C3496_24765 PF03707 Bacterial signalling protein N terminal repeat C3496_24765 PF00990 Diguanylate cyclase, GGDEF domain C3496_24765 PF00563 EAL domain C3496_24780 PF10787 Uncharacterised protein from bacillus cereus group C3496_24785 PF03788 LrgA family C3496_24790 PF00392 Bacterial regulatory proteins, gntR family C3496_24790 PF00155 Aminotransferase class I and II C3496_24795 PF00561 alpha/beta hydrolase fold C3496_24795 PF00364 Biotin-requiring enzyme C3496_24800 PF02585 GlcNAc-PI de-N-acetylase C3496_24815 PF00388 Phosphatidylinositol-specific phospholipase C, X domain C3496_24820 PF00082 Subtilase family C3496_24825 PF07486 Cell Wall Hydrolase C3496_24835 PF00884 Sulfatase C3496_24840 PF00350 Dynamin family C3496_24855 PF01648 4'-phosphopantetheinyl transferase superfamily C3496_24865 PF00975 Thioesterase domain C3496_24870 PF00109 Beta-ketoacyl synthase, N-terminal domain C3496_24870 PF00202 Aminotransferase class-III C3496_24870 PF00501 AMP-binding enzyme C3496_24870 PF13193 AMP-binding enzyme C-terminal domain C3496_24870 PF00668 Condensation domain C3496_24870 PF16197 Ketoacyl-synthetase C-terminal extension C3496_24870 PF00550 Phosphopantetheine attachment site C3496_24870 PF02801 Beta-ketoacyl synthase, C-terminal domain C3496_24875 PF08659 KR domain C3496_24875 PF00698 Acyl transferase domain C3496_24875 PF14765 Polyketide synthase dehydratase C3496_24875 PF00550 Phosphopantetheine attachment site C3496_24875 PF08240 Alcohol dehydrogenase GroES-like domain C3496_24875 PF02801 Beta-ketoacyl synthase, C-terminal domain C3496_24875 PF00109 Beta-ketoacyl synthase, N-terminal domain C3496_24875 PF16197 Ketoacyl-synthetase C-terminal extension C3496_24880 PF16197 Ketoacyl-synthetase C-terminal extension C3496_24880 PF14765 Polyketide synthase dehydratase C3496_24880 PF08659 KR domain C3496_24880 PF02801 Beta-ketoacyl synthase, C-terminal domain C3496_24880 PF00698 Acyl transferase domain C3496_24880 PF00109 Beta-ketoacyl synthase, N-terminal domain C3496_24880 PF00550 Phosphopantetheine attachment site C3496_24885 PF00766 Electron transfer flavoprotein FAD-binding domain C3496_24885 PF01012 Electron transfer flavoprotein domain C3496_24890 PF01012 Electron transfer flavoprotein domain C3496_24895 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C3496_24895 PF02770 Acyl-CoA dehydrogenase, middle domain C3496_24895 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C3496_24910 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C3496_24910 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C3496_24915 PF00550 Phosphopantetheine attachment site C3496_24915 PF00668 Condensation domain C3496_24915 PF13193 AMP-binding enzyme C-terminal domain C3496_24915 PF00501 AMP-binding enzyme C3496_24920 PF00501 AMP-binding enzyme C3496_24920 PF13193 AMP-binding enzyme C-terminal domain C3496_24920 PF00668 Condensation domain C3496_24920 PF00550 Phosphopantetheine attachment site C3496_24935 PF00005 ABC transporter C3496_24950 PF01119 DNA mismatch repair protein, C-terminal domain C3496_24950 PF08676 MutL C terminal dimerisation domain C3496_24955 PF05190 MutS family domain IV C3496_24955 PF05192 MutS domain III C3496_24955 PF05188 MutS domain II C3496_24955 PF01624 MutS domain I C3496_24955 PF00488 MutS domain V C3496_24960 PF10628 Outer spore coat protein E (CotE) C3496_24965 PF06133 Control of competence regulator ComK, YlbF/YmcA C3496_24970 PF04055 Radical SAM superfamily C3496_24970 PF00919 Uncharacterized protein family UPF0004 C3496_24970 PF01938 TRAM domain C3496_24975 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C3496_24980 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg C3496_24980 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase C3496_24980 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II C3496_24985 PF01244 Membrane dipeptidase (Peptidase family M19) C3496_24990 PF04232 Stage V sporulation protein S (SpoVS) C3496_24995 PF13277 YmdB-like protein C3496_25000 PF12072 Domain of unknown function (DUF3552) C3496_25000 PF00013 KH domain C3496_25000 PF01966 HD domain C3496_25005 PF00154 recA bacterial DNA recombination protein C3496_25015 PF02464 Competence-damaged protein C3496_25015 PF00994 Probable molybdopterin binding domain C3496_25015 PF18146 Damage-inducible protein CinA KH domain C3496_25020 PF01066 CDP-alcohol phosphatidyltransferase C3496_25025 PF13464 Domain of unknown function (DUF4115) C3496_25030 PF11868 Protein of unknown function (DUF3388) C3496_25035 PF11588 Protein of unknown function (DUF3243) C3496_25045 PF05193 Peptidase M16 inactive domain C3496_25045 PF00675 Insulinase (Peptidase family M16) C3496_25050 PF05193 Peptidase M16 inactive domain C3496_25055 PF02653 Branched-chain amino acid transport system / permease component C3496_25060 PF02653 Branched-chain amino acid transport system / permease component C3496_25065 PF00005 ABC transporter C3496_25070 PF02608 ABC transporter substrate-binding protein PnrA-like C3496_25075 PF07702 UTRA domain C3496_25075 PF00392 Bacterial regulatory proteins, gntR family C3496_25085 PF01580 FtsK/SpoIIIE family C3496_25085 PF09397 Ftsk gamma domain C3496_25085 PF17854 FtsK alpha domain C3496_25090 PF14035 YlzJ-like protein C3496_25095 PF00574 Clp protease C3496_25100 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain C3496_25100 PF17770 Ribonuclease J C-terminal domain C3496_25100 PF00753 Metallo-beta-lactamase superfamily C3496_25110 PF00701 Dihydrodipicolinate synthetase family C3496_25115 PF13840 ACT domain C3496_25115 PF00696 Amino acid kinase family C3496_25120 PF02774 Semialdehyde dehydrogenase, dimerisation domain C3496_25120 PF01118 Semialdehyde dehydrogenase, NAD binding domain C3496_25125 PF02441 Flavoprotein C3496_25150 PF05105 Bacteriophage holin family C3496_25210 PF00589 Phage integrase family C3496_25245 PF03796 DnaB-like helicase C terminal domain C3496_25245 PF00772 DnaB-like helicase N terminal domain C3496_25280 PF01381 Helix-turn-helix C3496_25315 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C3496_25315 PF16924 Dipicolinate synthase subunit A N-terminal domain C3496_25325 PF05239 PRC-barrel domain C3496_25330 PF05193 Peptidase M16 inactive domain C3496_25330 PF00675 Insulinase (Peptidase family M16) C3496_25335 PF01522 Polysaccharide deacetylase C3496_25340 PF00575 S1 RNA binding domain C3496_25340 PF00013 KH domain C3496_25340 PF03725 3' exoribonuclease family, domain 2 C3496_25340 PF01138 3' exoribonuclease family, domain 1 C3496_25340 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain C3496_25345 PF00312 Ribosomal protein S15 C3496_25350 PF06574 FAD synthetase C3496_25350 PF01687 Riboflavin kinase C3496_25355 PF01509 TruB family pseudouridylate synthase (N terminal domain) C3496_25355 PF16198 tRNA pseudouridylate synthase B C-terminal domain C3496_25360 PF02033 Ribosome-binding factor A C3496_25365 PF04456 Protein of unknown function (DUF503) C3496_25370 PF00009 Elongation factor Tu GTP binding domain C3496_25370 PF11987 Translation-initiation factor 2 C3496_25370 PF04760 Translation initiation factor IF-2, N-terminal region C3496_25375 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family C3496_25380 PF04296 Protein of unknown function (DUF448) C3496_25385 PF08529 NusA N-terminal domain C3496_25385 PF13184 NusA-like KH domain C3496_25385 PF00575 S1 RNA binding domain C3496_25390 PF02576 RimP N-terminal domain C3496_25390 PF17384 RimP C-terminal SH3 domain C3496_25395 PF11490 DNA polymerase III polC-type N-terminus II C3496_25395 PF14480 DNA polymerase III polC-type N-terminus I C3496_25395 PF00929 Exonuclease C3496_25395 PF02811 PHP domain C3496_25395 PF14579 Helix-hairpin-helix motif C3496_25395 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C3496_25395 PF07733 Bacterial DNA polymerase III alpha NTPase domain C3496_25405 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C3496_25405 PF04073 Aminoacyl-tRNA editing domain C3496_25405 PF03129 Anticodon binding domain C3496_25410 PF17820 PDZ domain C3496_25410 PF02163 Peptidase family M50 C3496_25415 PF13288 DXP reductoisomerase C-terminal domain C3496_25415 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase C3496_25415 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain C3496_25425 PF01255 Putative undecaprenyl diphosphate synthase C3496_25430 PF01765 Ribosome recycling factor C3496_25435 PF00696 Amino acid kinase family C3496_25440 PF00889 Elongation factor TS C3496_25445 PF00318 Ribosomal protein S2 C3496_25450 PF06018 CodY GAF-like domain C3496_25450 PF08222 CodY helix-turn-helix domain C3496_25455 PF10431 C-terminal, D2-small domain, of ClpB protein C3496_25455 PF07724 AAA domain (Cdc48 subfamily) C3496_25455 PF00004 ATPase family associated with various cellular activities (AAA) C3496_25460 PF00227 Proteasome subunit C3496_25465 PF00589 Phage integrase family C3496_25465 PF02899 Phage integrase, N-terminal SAM-like domain C3496_25470 PF01134 Glucose inhibited division protein A C3496_25475 PF01751 Toprim domain C3496_25475 PF01396 Topoisomerase DNA binding C4 zinc finger C3496_25475 PF01131 DNA topoisomerase C3496_25480 PF02481 DNA recombination-mediator protein A C3496_25485 PF02629 CoA binding domain C3496_25485 PF00549 CoA-ligase C3496_25490 PF00549 CoA-ligase C3496_25490 PF08442 ATP-grasp domain C3496_25495 PF01351 Ribonuclease HII C3496_25500 PF01926 50S ribosome-binding GTPase C3496_25505 PF10502 Signal peptidase, peptidase S26 C3496_25510 PF01245 Ribosomal protein L19 C3496_25515 PF01746 tRNA (Guanine-1)-methyltransferase C3496_25520 PF01782 RimM N-terminal domain C3496_25520 PF05239 PRC-barrel domain C3496_25530 PF00886 Ribosomal protein S16 C3496_25535 PF02978 Signal peptide binding domain C3496_25535 PF00448 SRP54-type protein, GTPase domain C3496_25535 PF02881 SRP54-type protein, helical bundle domain C3496_25540 PF04297 Putative helix-turn-helix protein, YlxM / p13 like C3496_25545 PF00448 SRP54-type protein, GTPase domain C3496_25545 PF02881 SRP54-type protein, helical bundle domain C3496_25550 PF06470 SMC proteins Flexible Hinge Domain C3496_25550 PF02463 RecF/RecN/SMC N terminal domain C3496_25555 PF14622 Ribonuclease-III-like C3496_25555 PF00035 Double-stranded RNA binding motif C3496_25560 PF00550 Phosphopantetheine attachment site C3496_25570 PF00698 Acyl transferase domain C3496_25575 PF02504 Fatty acid synthesis protein C3496_25580 PF03061 Thioesterase superfamily C3496_25585 PF17191 RecG wedge domain C3496_25585 PF00271 Helicase conserved C-terminal domain C3496_25585 PF00270 DEAD/DEAH box helicase C3496_25590 PF02734 DAK2 domain C3496_25590 PF13684 Dihydroxyacetone kinase family C3496_25595 PF03780 Asp23 family, cell envelope-related function C3496_25600 PF00830 Ribosomal L28 family C3496_25605 PF08183 Stage V sporulation protein family C3496_25610 PF04263 Thiamin pyrophosphokinase, catalytic domain C3496_25610 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain C3496_25615 PF00834 Ribulose-phosphate 3 epimerase family C3496_25620 PF16745 RsgA N-terminal domain C3496_25620 PF03193 RsgA GTPase C3496_25625 PF00069 Protein kinase domain C3496_25625 PF03793 PASTA domain C3496_25635 PF04055 Radical SAM superfamily C3496_25640 PF01029 NusB family C3496_25640 PF01189 16S rRNA methyltransferase RsmB/F C3496_25645 PF02911 Formyl transferase, C-terminal domain C3496_25645 PF00551 Formyl transferase C3496_25650 PF01327 Polypeptide deformylase C3496_25655 PF18319 PriA DNA helicase Cys-rich region (CRR) domain C3496_25655 PF04851 Type III restriction enzyme, res subunit C3496_25655 PF18074 Primosomal protein N C-terminal domain C3496_25655 PF17764 3′ DNA-binding domain (3′BD) C3496_25655 PF00271 Helicase conserved C-terminal domain C3496_25660 PF04127 DNA / pantothenate metabolism flavoprotein C3496_25660 PF02441 Flavoprotein C3496_25665 PF01192 RNA polymerase Rpb6 C3496_25670 PF00625 Guanylate kinase C3496_25675 PF04025 Domain of unknown function (DUF370) C3496_25680 PF03755 YicC-like family, N-terminal region C3496_25680 PF08340 Domain of unknown function (DUF1732) C3496_25685 PF00690 Cation transporter/ATPase, N-terminus C3496_25685 PF00689 Cation transporting ATPase, C-terminus C3496_25690 PF05670 NFACT protein RNA binding domain C3496_25695 PF01321 Creatinase/Prolidase N-terminal domain C3496_25695 PF00557 Metallopeptidase family M24 C3496_25730 PF00156 Phosphoribosyl transferase domain C3496_25735 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family C3496_25740 PF01180 Dihydroorotate dehydrogenase C3496_25745 PF00175 Oxidoreductase NAD-binding domain C3496_25745 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B C3496_25750 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C3496_25750 PF02142 MGS-like domain C3496_25750 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C3496_25755 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain C3496_25755 PF00117 Glutamine amidotransferase class-I C3496_25760 PF01979 Amidohydrolase family C3496_25765 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C3496_25765 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C3496_25770 PF00860 Permease family C3496_25775 PF00156 Phosphoribosyl transferase domain C3496_25780 PF01479 S4 domain C3496_25780 PF00849 RNA pseudouridylate synthase C3496_25785 PF01252 Signal peptidase (SPase) II C3496_25795 PF08264 Anticodon-binding domain of tRNA C3496_25795 PF00133 tRNA synthetases class I (I, L, M and V) C3496_25795 PF06827 Zinc finger found in FPG and IleRS C3496_25800 PF05103 DivIVA protein C3496_25805 PF17774 Putative RNA-binding domain in YlmH C3496_25805 PF01479 S4 domain C3496_25810 PF02325 YGGT family C3496_25815 PF04472 Cell division protein SepF C3496_25820 PF01168 Alanine racemase, N-terminal domain C3496_25825 PF02578 Multi-copper polyphenol oxidoreductase laccase C3496_25830 PF05239 PRC-barrel domain C3496_25835 PF04542 Sigma-70 region 2 C3496_25835 PF04539 Sigma-70 region 3 C3496_25835 PF04545 Sigma-70, region 4 C3496_25840 PF04542 Sigma-70 region 2 C3496_25840 PF04545 Sigma-70, region 4 C3496_25845 PF03419 Sporulation factor SpoIIGA C3496_25850 PF12327 FtsZ family, C-terminal domain C3496_25850 PF00091 Tubulin/FtsZ family, GTPase domain C3496_25855 PF02491 SHS2 domain inserted in FTSA C3496_25860 PF03799 Cell division protein FtsQ C3496_25860 PF08478 POTRA domain, FtsQ-type C3496_25865 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain C3496_25865 PF01565 FAD binding domain C3496_25870 PF03033 Glycosyltransferase family 28 N-terminal domain C3496_25870 PF04101 Glycosyltransferase family 28 C-terminal domain C3496_25875 PF01098 Cell cycle protein C3496_25880 PF08245 Mur ligase middle domain C3496_25880 PF02875 Mur ligase family, glutamate ligase domain C3496_25885 PF00953 Glycosyl transferase family 4 C3496_25885 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 C3496_25890 PF01225 Mur ligase family, catalytic domain C3496_25890 PF02875 Mur ligase family, glutamate ligase domain C3496_25890 PF08245 Mur ligase middle domain C3496_25895 PF03793 PASTA domain C3496_25895 PF03717 Penicillin-binding Protein dimerisation domain C3496_25895 PF00905 Penicillin binding protein transpeptidase domain C3496_25900 PF03793 PASTA domain C3496_25900 PF03717 Penicillin-binding Protein dimerisation domain C3496_25900 PF00905 Penicillin binding protein transpeptidase domain C3496_25905 PF04977 Septum formation initiator C3496_25910 PF01795 MraW methylase family C3496_25915 PF10079 Bacillithiol biosynthesis BshC C3496_25920 PF02558 Ketopantoate reductase PanE/ApbA C3496_25920 PF08546 Ketopantoate reductase PanE/ApbA C terminal C3496_25925 PF00583 Acetyltransferase (GNAT) family C3496_25935 PF01783 Ribosomal L32p protein family C3496_25940 PF02620 Large ribosomal RNA subunit accumulation protein YceD C3496_25945 PF05636 HIGH Nucleotidyl Transferase C3496_25950 PF13180 PDZ domain C3496_25950 PF05362 Lon protease (S16) C-terminal proteolytic domain C3496_25955 PF01734 Patatin-like phospholipase C3496_25960 PF07670 Nucleoside recognition C3496_25965 PF01467 Cytidylyltransferase-like C3496_25980 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) C3496_25985 PF06133 Control of competence regulator ComK, YlbF/YmcA C3496_25990 PF00300 Histidine phosphatase superfamily (branch 1) C3496_25995 PF14003 YlbE-like protein C3496_26000 PF14071 Putative coat protein C3496_26005 PF14504 CAP-associated N-terminal C3496_26005 PF00188 Cysteine-rich secretory protein family C3496_26010 PF08868 YugN-like family C3496_26015 PF00795 Carbon-nitrogen hydrolase C3496_26020 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) C3496_26025 PF03626 Prokaryotic Cytochrome C oxidase subunit IV C3496_26030 PF00510 Cytochrome c oxidase subunit III C3496_26035 PF00115 Cytochrome C and Quinol oxidase polypeptide I C3496_26040 PF00034 Cytochrome c C3496_26040 PF02790 Cytochrome C oxidase subunit II, transmembrane domain C3496_26040 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C3496_26045 PF01040 UbiA prenyltransferase family C3496_26050 PF02628 Cytochrome oxidase assembly protein C3496_26055 PF00289 Biotin carboxylase, N-terminal domain C3496_26055 PF02785 Biotin carboxylase C-terminal domain C3496_26055 PF00364 Biotin-requiring enzyme C3496_26055 PF00682 HMGL-like C3496_26055 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C3496_26055 PF02436 Conserved carboxylase domain C3496_26065 PF01098 Cell cycle protein C3496_26070 PF07408 Protein of unknown function (DUF1507) C3496_26080 PF02562 PhoH-like protein C3496_26080 PF13638 PIN domain C3496_26090 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) C3496_26100 PF14036 YlaH-like protein C3496_26105 PF00679 Elongation factor G C-terminus C3496_26105 PF14492 Elongation Factor G, domain II C3496_26105 PF00009 Elongation factor Tu GTP binding domain C3496_26105 PF03144 Elongation factor Tu domain 2 C3496_26115 PF00459 Inositol monophosphatase family C3496_26125 PF06335 Protein of unknown function (DUF1054) C3496_26130 PF05256 Uncharacterised protein family (UPF0223) C3496_26135 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain C3496_26135 PF01276 Orn/Lys/Arg decarboxylase, major domain C3496_26175 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C3496_26175 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3496_26180 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C3496_26180 PF00364 Biotin-requiring enzyme C3496_26180 PF02817 e3 binding domain C3496_26185 PF02779 Transketolase, pyrimidine binding domain C3496_26185 PF02780 Transketolase, C-terminal domain C3496_26190 PF00676 Dehydrogenase E1 component C3496_26200 PF01327 Polypeptide deformylase C3496_26215 PF07288 Protein of unknown function (DUF1447) C3496_26220 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain C3496_26220 PF00753 Metallo-beta-lactamase superfamily C3496_26220 PF17770 Ribonuclease J C-terminal domain C3496_26225 PF02254 TrkA-N domain C3496_26225 PF02080 TrkA-C domain C3496_26235 PF07687 Peptidase dimerisation domain C3496_26235 PF01546 Peptidase family M20/M25/M40 C3496_26240 PF00132 Bacterial transferase hexapeptide (six repeats) C3496_26240 PF14602 Hexapeptide repeat of succinyl-transferase C3496_26240 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal C3496_26245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3496_26245 PF03466 LysR substrate binding domain C3496_26260 PF04308 Ribonuclease H-like C3496_26270 PF08796 Protein of unknown function (DUF1797) C3496_26285 PF10388 EAL-domain associated signalling protein domain C3496_26285 PF00563 EAL domain C3496_26295 PF00149 Calcineurin-like phosphoesterase C3496_26295 PF10518 TAT (twin-arginine translocation) pathway signal sequence C3496_26310 PF02503 Polyphosphate kinase middle domain C3496_26310 PF17941 Polyphosphate kinase C-terminal domain 1 C3496_26310 PF13089 Polyphosphate kinase N-terminal domain C3496_26310 PF13090 Polyphosphate kinase C-terminal domain 2 C3496_26315 PF02541 Ppx/GppA phosphatase family C3496_26320 PF14177 YkyB-like protein C3496_26350 PF07690 Major Facilitator Superfamily C3496_26365 PF08267 Cobalamin-independent synthase, N-terminal domain C3496_26365 PF01717 Cobalamin-independent synthase, Catalytic domain C3496_26375 PF14040 Deoxyribonuclease NucA/NucB C3496_26390 PF00512 His Kinase A (phospho-acceptor) domain C3496_26390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3496_26400 PF00155 Aminotransferase class I and II C3496_26405 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C3496_26405 PF00356 Bacterial regulatory proteins, lacI family C3496_26410 PF00528 Binding-protein-dependent transport system inner membrane component C3496_26415 PF00528 Binding-protein-dependent transport system inner membrane component C3496_26420 PF13416 Bacterial extracellular solute-binding protein C3496_26425 PF00128 Alpha amylase, catalytic domain C3496_26425 PF02903 Alpha amylase, N-terminal ig-like domain C3496_26425 PF16657 Maltogenic Amylase, C-terminal domain C3496_26430 PF00128 Alpha amylase, catalytic domain C3496_26430 PF16657 Maltogenic Amylase, C-terminal domain C3496_26435 PF00005 ABC transporter C3496_26435 PF17912 MalK OB fold domain C3496_26435 PF03459 TOBE domain C3496_26480 PF00108 Thiolase, N-terminal domain C3496_26480 PF02803 Thiolase, C-terminal domain C3496_26485 PF00293 NUDIX domain C3496_26515 PF03551 Transcriptional regulator PadR-like family C3496_26530 PF01008 Initiation factor 2 subunit family C3496_26535 PF01636 Phosphotransferase enzyme family C3496_26540 PF00795 Carbon-nitrogen hydrolase C3496_26545 PF00155 Aminotransferase class I and II C3496_26550 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain C3496_26550 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain C3496_26560 PF00596 Class II Aldolase and Adducin N-terminal domain C3496_26565 PF03079 ARD/ARD' family C3496_26580 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C3496_26580 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C3496_26590 PF08448 PAS fold C3496_26590 PF00990 Diguanylate cyclase, GGDEF domain C3496_26595 PF00881 Nitroreductase family C3496_26610 PF05524 PEP-utilising enzyme, N-terminal C3496_26610 PF02896 PEP-utilising enzyme, TIM barrel domain C3496_26610 PF00391 PEP-utilising enzyme, mobile domain C3496_26615 PF00381 PTS HPr component phosphorylation site C3496_26620 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C3496_26620 PF00367 phosphotransferase system, EIIB C3496_26620 PF02378 Phosphotransferase system, EIIC C3496_26625 PF03123 CAT RNA binding domain C3496_26625 PF00874 PRD domain C3496_26635 PF00392 Bacterial regulatory proteins, gntR family C3496_26635 PF07702 UTRA domain C3496_26640 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase C3496_26645 PF01979 Amidohydrolase family C3496_26655 PF04079 Segregation and condensation complex subunit ScpB C3496_26665 PF02616 Segregation and condensation protein ScpA C3496_26675 PF03745 Domain of unknown function (DUF309) C3496_26680 PF00583 Acetyltransferase (GNAT) family C3496_26690 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C3496_26695 PF06207 Protein of unknown function (DUF1002) C3496_26705 PF03323 Bacillus/Clostridium GerA spore germination protein C3496_26710 PF14097 Stage V sporulation protein AE1 C3496_26715 PF03862 SpoVAC/SpoVAEB sporulation membrane protein C3496_26720 PF07451 Stage V sporulation protein AD (SpoVAD) C3496_26725 PF03862 SpoVAC/SpoVAEB sporulation membrane protein C3496_26730 PF13782 Stage V sporulation protein AB C3496_26735 PF12164 Stage V sporulation protein AA C3496_26745 PF00209 Sodium:neurotransmitter symporter family C3496_26750 PF04539 Sigma-70 region 3 C3496_26750 PF04545 Sigma-70, region 4 C3496_26750 PF04542 Sigma-70 region 2 C3496_26755 PF13581 Histidine kinase-like ATPase domain C3496_26760 PF01740 STAS domain C3496_26765 PF07943 Penicillin-binding protein 5, C-terminal domain C3496_26765 PF00768 D-alanyl-D-alanine carboxypeptidase C3496_26775 PF00392 Bacterial regulatory proteins, gntR family C3496_26780 PF00005 ABC transporter C3496_26800 PF01047 MarR family C3496_26810 PF00860 Permease family C3496_26815 PF01544 CorA-like Mg2+ transporter protein C3496_26820 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain C3496_26820 PF00591 Glycosyl transferase family, a/b domain C3496_26820 PF02885 Glycosyl transferase family, helical bundle domain C3496_26825 PF01048 Phosphorylase superfamily C3496_26830 PF01676 Metalloenzyme superfamily C3496_26840 PF02899 Phage integrase, N-terminal SAM-like domain C3496_26840 PF00589 Phage integrase family C3496_26845 PF14004 Protein of unknown function (DUF4227) C3496_26850 PF01475 Ferric uptake regulator family C3496_26855 PF01944 Stage II sporulation protein M C3496_26865 PF00293 NUDIX domain C3496_26870 PF13072 Mother cell inhibitor of FtsZ C3496_26875 PF00248 Aldo/keto reductase family C3496_26880 PF00248 Aldo/keto reductase family C3496_26885 PF13673 Acetyltransferase (GNAT) domain C3496_26885 PF04229 GrpB protein C3496_26895 PF00746 LPXTG cell wall anchor motif C3496_26895 PF00149 Calcineurin-like phosphoesterase C3496_26895 PF00565 Staphylococcal nuclease homologue C3496_26895 PF02872 5'-nucleotidase, C-terminal domain C3496_26905 PF12146 Serine aminopeptidase, S33 C3496_26910 PF03553 Na+/H+ antiporter family C3496_26910 PF13726 Na+-H+ antiporter family C3496_26915 PF00356 Bacterial regulatory proteins, lacI family C3496_26920 PF00583 Acetyltransferase (GNAT) family C3496_26925 PF12146 Serine aminopeptidase, S33 C3496_26930 PF10827 Protein of unknown function (DUF2552) C3496_26940 PF01872 RibD C-terminal domain C3496_26940 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C3496_26945 PF00677 Lumazine binding domain C3496_26950 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C3496_26950 PF00925 GTP cyclohydrolase II C3496_26955 PF00885 6,7-dimethyl-8-ribityllumazine synthase C3496_26965 PF04055 Radical SAM superfamily C3496_26965 PF06968 Biotin and Thiamin Synthesis associated domain C3496_26970 PF13847 Methyltransferase domain C3496_26975 PF08241 Methyltransferase domain C3496_26975 PF12697 Alpha/beta hydrolase family C3496_26980 PF00155 Aminotransferase class I and II C3496_26990 PF00202 Aminotransferase class-III C3496_27005 PF03553 Na+/H+ antiporter family C3496_27010 PF02872 5'-nucleotidase, C-terminal domain C3496_27010 PF00149 Calcineurin-like phosphoesterase C3496_27020 PF01037 Lrp/AsnC ligand binding domain C3496_27020 PF13404 AsnC-type helix-turn-helix domain C3496_27035 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C3496_27035 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C3496_27040 PF00202 Aminotransferase class-III C3496_27045 PF00696 Amino acid kinase family C3496_27050 PF01960 ArgJ family C3496_27055 PF01118 Semialdehyde dehydrogenase, NAD binding domain C3496_27055 PF02774 Semialdehyde dehydrogenase, dimerisation domain C3496_27065 PF00106 short chain dehydrogenase C3496_27070 PF00753 Metallo-beta-lactamase superfamily C3496_27075 PF14748 Pyrroline-5-carboxylate reductase dimerisation C3496_27075 PF03807 NADP oxidoreductase coenzyme F420-dependent C3496_27080 PF03313 Serine dehydratase alpha chain C3496_27085 PF03315 Serine dehydratase beta chain C3496_27085 PF01842 ACT domain C3496_27095 PF12706 Beta-lactamase superfamily domain C3496_27095 PF00753 Metallo-beta-lactamase superfamily C3496_27110 PF11799 impB/mucB/samB family C-terminal domain C3496_27110 PF00817 impB/mucB/samB family C3496_27110 PF11798 IMS family HHH motif C3496_27120 PF01546 Peptidase family M20/M25/M40 C3496_27120 PF07687 Peptidase dimerisation domain C3496_27125 PF13302 Acetyltransferase (GNAT) domain C3496_27140 PF03734 L,D-transpeptidase catalytic domain C3496_27145 PF11728 Putative aromatic acid exporter C-terminal domain C3496_27145 PF06081 Aromatic acid exporter family member 1 C3496_27150 PF00005 ABC transporter C3496_27155 PF00528 Binding-protein-dependent transport system inner membrane component C3496_27160 PF00497 Bacterial extracellular solute-binding proteins, family 3 C3496_27170 PF06491 Disulphide isomerase C3496_27175 PF11208 Protein of unknown function (DUF2992) C3496_27180 PF09297 NADH pyrophosphatase zinc ribbon domain C3496_27180 PF00293 NUDIX domain C3496_27185 PF04239 Protein of unknown function (DUF421) C3496_27190 PF01098 Cell cycle protein C3496_27200 PF02817 e3 binding domain C3496_27200 PF00364 Biotin-requiring enzyme C3496_27200 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C3496_27205 PF02779 Transketolase, pyrimidine binding domain C3496_27205 PF02780 Transketolase, C-terminal domain C3496_27210 PF00676 Dehydrogenase E1 component C3496_27215 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C3496_27215 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3496_27220 PF00871 Acetokinase family C3496_27225 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C3496_27225 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C3496_27230 PF01515 Phosphate acetyl/butaryl transferase C3496_27240 PF02954 Bacterial regulatory protein, Fis family C3496_27240 PF00989 PAS fold C3496_27240 PF00158 Sigma-54 interaction domain C3496_27245 PF11118 Protein of unknown function (DUF2627) C3496_27250 PF03009 Glycerophosphoryl diester phosphodiesterase family C3496_27255 PF14174 YycC-like protein C3496_27265 PF08769 Sporulation initiation factor Spo0A C terminal C3496_27265 PF00072 Response regulator receiver domain C3496_27275 PF05580 SpoIVB peptidase S55 C3496_27275 PF17820 PDZ domain C3496_27280 PF13476 AAA domain C3496_27285 PF02863 Arginine repressor, C-terminal domain C3496_27285 PF01316 Arginine repressor, DNA binding domain C3496_27290 PF01479 S4 domain C3496_27290 PF01728 FtsJ-like methyltransferase C3496_27295 PF02779 Transketolase, pyrimidine binding domain C3496_27295 PF02780 Transketolase, C-terminal domain C3496_27295 PF13292 1-deoxy-D-xylulose-5-phosphate synthase C3496_27300 PF00348 Polyprenyl synthetase C3496_27305 PF02609 Exonuclease VII small subunit C3496_27310 PF13742 OB-fold nucleic acid binding domain C3496_27310 PF02601 Exonuclease VII, large subunit C3496_27315 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain C3496_27315 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain C3496_27320 PF01029 NusB family C3496_27325 PF03780 Asp23 family, cell envelope-related function C3496_27330 PF00289 Biotin carboxylase, N-terminal domain C3496_27330 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C3496_27330 PF02785 Biotin carboxylase C-terminal domain C3496_27335 PF00364 Biotin-requiring enzyme C3496_27345 PF12685 SpoIIIAH-like protein C3496_27355 PF09581 Stage III sporulation protein AF (Spore_III_AF) C3496_27360 PF09546 Stage III sporulation protein AE (spore_III_AE) C3496_27365 PF06686 Stage III sporulation protein AC/AD protein family C3496_27370 PF06686 Stage III sporulation protein AC/AD protein family C3496_27375 PF09548 Stage III sporulation protein AB (spore_III_AB) C3496_27400 PF01132 Elongation factor P (EF-P) OB domain C3496_27400 PF08207 Elongation factor P (EF-P) KOW-like domain C3496_27400 PF09285 Elongation factor P, C-terminal C3496_27405 PF01321 Creatinase/Prolidase N-terminal domain C3496_27405 PF00557 Metallopeptidase family M24 C3496_27410 PF01220 Dehydroquinase class II C3496_27415 PF11085 Conserved membrane protein YqhR C3496_27420 PF07136 Protein of unknown function (DUF1385) C3496_27430 PF13419 Haloacid dehalogenase-like hydrolase C3496_27435 PF01325 Iron dependent repressor, N-terminal DNA binding domain C3496_27435 PF02742 Iron dependent repressor, metal binding and dimerisation domain C3496_27465 PF03099 Biotin/lipoate A/B protein ligase family C3496_27470 PF00581 Rhodanese-like domain C3496_27475 PF00356 Bacterial regulatory proteins, lacI family C3496_27475 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C3496_27485 PF00893 Small Multidrug Resistance protein C3496_27490 PF00893 Small Multidrug Resistance protein C3496_27530 PF00005 ABC transporter C3496_27535 PF00392 Bacterial regulatory proteins, gntR family C3496_27555 PF02347 Glycine cleavage system P-protein C3496_27560 PF02347 Glycine cleavage system P-protein C3496_27565 PF08669 Glycine cleavage T-protein C-terminal barrel domain C3496_27565 PF01571 Aminomethyltransferase folate-binding domain C3496_27570 PF00176 SNF2 family N-terminal domain C3496_27570 PF00271 Helicase conserved C-terminal domain C3496_27575 PF11079 Bacterial protein YqhG of unknown function C3496_27600 PF14038 YqzE-like protein C3496_27605 PF01202 Shikimate kinase C3496_27630 PF07963 Prokaryotic N-terminal methylation motif C3496_27640 PF00482 Type II secretion system (T2SS), protein F C3496_27645 PF00437 Type II/IV secretion system protein C3496_27655 PF11117 Protein of unknown function (DUF2626) C3496_27660 PF00375 Sodium:dicarboxylate symporter family C3496_27690 PF04101 Glycosyltransferase family 28 C-terminal domain C3496_27690 PF03033 Glycosyltransferase family 28 N-terminal domain C3496_27695 PF02607 B12 binding domain C3496_27695 PF02965 Vitamin B12 dependent methionine synthase, activation domain C3496_27695 PF00809 Pterin binding enzyme C3496_27695 PF02310 B12 binding domain C3496_27695 PF02574 Homocysteine S-methyltransferase C3496_27700 PF02574 Homocysteine S-methyltransferase C3496_27700 PF02219 Methylenetetrahydrofolate reductase C3496_27705 PF01053 Cys/Met metabolism PLP-dependent enzyme C3496_27710 PF01053 Cys/Met metabolism PLP-dependent enzyme C3496_27720 PF01022 Bacterial regulatory protein, arsR family C3496_27730 PF00753 Metallo-beta-lactamase superfamily C3496_27735 PF10958 Protein of unknown function (DUF2759) C3496_27740 PF00480 ROK family C3496_27745 PF06014 Bacterial protein of unknown function (DUF910) C3496_27750 PF01812 5-formyltetrahydrofolate cyclo-ligase family C3496_27755 PF00471 Ribosomal protein L33 C3496_27760 PF00483 Nucleotidyl transferase C3496_27765 PF01895 PhoU domain C3496_27770 PF00005 ABC transporter C3496_27775 PF00528 Binding-protein-dependent transport system inner membrane component C3496_27780 PF00528 Binding-protein-dependent transport system inner membrane component C3496_27785 PF12849 PBP superfamily domain C3496_27790 PF03717 Penicillin-binding Protein dimerisation domain C3496_27790 PF00905 Penicillin binding protein transpeptidase domain C3496_27795 PF07690 Major Facilitator Superfamily C3496_27800 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C3496_27800 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C3496_27820 PF04551 GcpE protein C3496_27825 PF01475 Ferric uptake regulator family C3496_27830 PF00950 ABC 3 transport family C3496_27835 PF00005 ABC transporter C3496_27840 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 C3496_27840 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) C3496_27845 PF11116 Protein of unknown function (DUF2624) C3496_27850 PF01261 Xylose isomerase-like TIM barrel C3496_27855 PF00271 Helicase conserved C-terminal domain C3496_27855 PF00270 DEAD/DEAH box helicase C3496_27865 PF02401 LytB protein C3496_27870 PF01784 NIF3 (NGG1p interacting factor 3) C3496_27875 PF04816 tRNA (adenine(22)-N(1))-methyltransferase C3496_27880 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C3496_27885 PF04539 Sigma-70 region 3 C3496_27885 PF04542 Sigma-70 region 2 C3496_27885 PF00140 Sigma-70 factor, region 1.2 C3496_27885 PF03979 Sigma-70 factor, region 1.1 C3496_27885 PF04545 Sigma-70, region 4 C3496_27890 PF10410 DnaB-helicase binding domain of primase C3496_27890 PF01807 CHC2 zinc finger C3496_27890 PF08275 DNA primase catalytic core, N-terminal domain C3496_27905 PF03618 Kinase/pyrophosphorylase C3496_27910 PF08279 HTH domain C3496_27910 PF00571 CBS domain C3496_27915 PF11967 Recombination protein O N terminal C3496_27915 PF02565 Recombination protein O C terminal C3496_27925 PF07650 KH domain C3496_27925 PF01926 50S ribosome-binding GTPase C3496_27930 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C3496_27935 PF01219 Prokaryotic diacylglycerol kinase C3496_27940 PF02130 Uncharacterized protein family UPF0054 C3496_27945 PF07698 7TM receptor with intracellular HD hydrolase C3496_27945 PF07697 7TM-HD extracellular C3496_27945 PF01966 HD domain C3496_27950 PF02562 PhoH-like protein C3496_27955 PF06898 Putative stage IV sporulation protein YqfD C3496_27965 PF07873 YabP family C3496_27970 PF09424 Yqey-like protein C3496_27975 PF01165 Ribosomal protein S21 C3496_27985 PF04055 Radical SAM superfamily C3496_27985 PF01938 TRAM domain C3496_27985 PF00919 Uncharacterized protein family UPF0004 C3496_27990 PF04452 RNA methyltransferase C3496_28000 PF01556 DnaJ C terminal domain C3496_28000 PF00226 DnaJ domain C3496_28000 PF00684 DnaJ central domain C3496_28005 PF00012 Hsp70 protein C3496_28010 PF01025 GrpE C3496_28015 PF01628 HrcA protein C terminal domain C3496_28020 PF04055 Radical SAM superfamily C3496_28020 PF06969 HemN C-terminal domain C3496_28025 PF01638 HxlR-like helix-turn-helix C3496_28030 PF00009 Elongation factor Tu GTP binding domain C3496_28030 PF03144 Elongation factor Tu domain 2 C3496_28030 PF00679 Elongation factor G C-terminus C3496_28030 PF06421 GTP-binding protein LepA C-terminus C3496_28040 PF03418 Germination protease C3496_28045 PF01649 Ribosomal protein S20 C3496_28050 PF06144 DNA polymerase III, delta subunit C3496_28055 PF14141 YqzM-like protein C3496_28060 PF13567 Domain of unknown function (DUF4131) C3496_28060 PF00753 Metallo-beta-lactamase superfamily C3496_28060 PF03772 Competence protein C3496_28065 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C3496_28070 PF10531 SLBB domain C3496_28075 PF14748 Pyrroline-5-carboxylate reductase dimerisation C3496_28075 PF03807 NADP oxidoreductase coenzyme F420-dependent C3496_28080 PF13649 Methyltransferase domain C3496_28090 PF01966 HD domain C3496_28095 PF01467 Cytidylyltransferase-like C3496_28100 PF01985 CRS1 / YhbY (CRM) domain C3496_28105 PF08501 Shikimate dehydrogenase substrate binding domain C3496_28105 PF01488 Shikimate / quinate 5-dehydrogenase C3496_28105 PF18317 Shikimate 5'-dehydrogenase C-terminal domain C3496_28110 PF01926 50S ribosome-binding GTPase C3496_28125 PF02666 Phosphatidylserine decarboxylase C3496_28130 PF04542 Sigma-70 region 2 C3496_28130 PF04545 Sigma-70, region 4 C3496_28140 PF16244 Domain of unknown function (DUF4901) C3496_28145 PF00471 Ribosomal protein L33 C3496_28150 PF00881 Nitroreductase family C3496_28155 PF04607 Region found in RelA / SpoT proteins C3496_28165 PF00245 Alkaline phosphatase C3496_28175 PF00561 alpha/beta hydrolase fold C3496_28175 PF08386 TAP-like protein C3496_28210 PF02225 PA domain C3496_28210 PF05922 Peptidase inhibitor I9 C3496_28210 PF13860 FlgD Ig-like domain C3496_28210 PF00082 Subtilase family C3496_28215 PF00351 Biopterin-dependent aromatic amino acid hydroxylase C3496_28225 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C3496_28230 PF07681 DoxX C3496_28260 PF00005 ABC transporter C3496_28265 PF01032 FecCD transport family C3496_28270 PF01497 Periplasmic binding protein C3496_28275 PF14143 YrhC-like protein C3496_28280 PF00171 Aldehyde dehydrogenase family C3496_28280 PF00465 Iron-containing alcohol dehydrogenase C3496_28285 PF01053 Cys/Met metabolism PLP-dependent enzyme C3496_28290 PF00291 Pyridoxal-phosphate dependent enzyme C3496_28295 PF01048 Phosphorylase superfamily C3496_28300 PF08241 Methyltransferase domain C3496_28315 PF00905 Penicillin binding protein transpeptidase domain C3496_28315 PF03717 Penicillin-binding Protein dimerisation domain C3496_28325 PF03449 Transcription elongation factor, N-terminal C3496_28325 PF01272 Transcription elongation factor, GreA/GreB, C-term C3496_28330 PF00485 Phosphoribulokinase / Uridine kinase family C3496_28335 PF16325 Peptidase family U32 C-terminal domain C3496_28335 PF01136 Peptidase family U32 C3496_28340 PF01136 Peptidase family U32 C3496_28345 PF01596 O-methyltransferase C3496_28350 PF02618 YceG-like family C3496_28355 PF06949 Protein of unknown function (DUF1292) C3496_28360 PF03652 Holliday junction resolvase C3496_28365 PF06135 IreB regulatory phosphoprotein C3496_28370 PF02272 DHHA1 domain C3496_28370 PF01411 tRNA synthetases class II (A) C3496_28370 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C3496_28380 PF01594 AI-2E family transporter C3496_28400 PF14490 Helix-hairpin-helix containing domain C3496_28400 PF13538 UvrD-like helicase C-terminal domain C3496_28400 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain C3496_28415 PF00266 Aminotransferase class-V C3496_28420 PF02082 Transcriptional regulator C3496_28425 PF16193 AAA C-terminal domain C3496_28425 PF12002 MgsA AAA+ ATPase C terminal C3496_28425 PF05496 Holliday junction DNA helicase RuvB P-loop domain C3496_28440 PF00899 ThiF family C3496_28445 PF02938 GAD domain C3496_28445 PF01336 OB-fold nucleic acid binding domain C3496_28445 PF00152 tRNA synthetases class II (D, K and N) C3496_28450 PF13393 Histidyl-tRNA synthetase C3496_28450 PF03129 Anticodon binding domain C3496_28465 PF02580 D-Tyr-tRNA(Tyr) deacylase C3496_28470 PF13291 ACT domain C3496_28470 PF04607 Region found in RelA / SpoT proteins C3496_28470 PF02824 TGS domain C3496_28475 PF00156 Phosphoribosyl transferase domain