BF37_1 SM00411 bacterial (prokaryotic) histone like domain BF37_1007 SM00984 UDP binding domain BF37_1018 SM00530 Helix-turn-helix XRE-family like proteins BF37_1022 SM00382 ATPases associated with a variety of cellular activities BF37_1071 SM00382 ATPases associated with a variety of cellular activities BF37_1078 SM00530 Helix-turn-helix XRE-family like proteins BF37_1084 SM00478 endonuclease III BF37_110 SM01329 BF37_110 BF37_1104 SM00226 Low molecular weight phosphatase family BF37_1106 SM00831 Cation transporter/ATPase, N-terminus BF37_111 SM00917 LeuA allosteric (dimerisation) domain BF37_1115 SM00946 Prolyl-tRNA synthetase, C-terminal BF37_1120 SM00530 Helix-turn-helix XRE-family like proteins BF37_1126 SM00060 Fibronectin type 3 domain BF37_1126 SM00636 BF37_1126 BF37_1126 SM00637 BF37_1126 BF37_1127 SM00382 ATPases associated with a variety of cellular activities BF37_1128 SM00382 ATPases associated with a variety of cellular activities BF37_1132 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BF37_1132 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF37_1136 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BF37_1136 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BF37_1136 SM00493 BF37_1136 BF37_1140 SM00642 Alpha-amylase domain BF37_1141 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BF37_1141 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF37_1142 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BF37_1142 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF37_1143 SM00382 ATPases associated with a variety of cellular activities BF37_1144 SM00062 Bacterial periplasmic substrate-binding proteins BF37_1144 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BF37_1165 SM01007 Class II Aldolase and Adducin N-terminal domain BF37_1174 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BF37_1187 SM00382 ATPases associated with a variety of cellular activities BF37_1190 SM00046 Diacylglycerol kinase catalytic domain (presumed) BF37_1191 SM00845 GatB domain BF37_1195 SM00347 helix_turn_helix multiple antibiotic resistance protein BF37_12 SM01240 BF37_12 BF37_1202 SM00382 ATPases associated with a variety of cellular activities BF37_1202 SM00930 BF37_1202 BF37_1208 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BF37_1208 SM00292 breast cancer carboxy-terminal domain BF37_1208 SM00532 Ligase N family BF37_1212 SM00244 prohibitin homologues BF37_1214 SM01209 BF37_1214 BF37_1214 SM01210 BF37_1214 BF37_1215 SM00798 AICARFT/IMPCHase bienzyme BF37_1215 SM00851 MGS-like domain BF37_1220 SM01211 BF37_1220 BF37_1223 SM00998 Adenylosuccinate lyase C-terminus BF37_1225 SM01001 AIR carboxylase BF37_1230 SM00448 cheY-homologous receiver domain BF37_1230 SM00862 Transcriptional regulatory protein, C terminal BF37_1231 SM00387 Histidine kinase-like ATPases BF37_1231 SM00388 His Kinase A (phosphoacceptor) domain BF37_1232 SM00382 ATPases associated with a variety of cellular activities BF37_125 SM00347 helix_turn_helix multiple antibiotic resistance protein BF37_1252 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF37_1252 SM00387 Histidine kinase-like ATPases BF37_1252 SM00388 His Kinase A (phosphoacceptor) domain BF37_1253 SM00448 cheY-homologous receiver domain BF37_1253 SM00862 Transcriptional regulatory protein, C terminal BF37_1257 SM00883 Chaperonin 10 Kd subunit BF37_1260 SM00881 CoA binding domain BF37_1261 SM00382 ATPases associated with a variety of cellular activities BF37_1283 SM00731 SprT homologues. BF37_1284 SM00316 Ribosomal protein S1-like RNA-binding domain BF37_1284 SM00732 Likely ribonuclease with RNase H fold. BF37_1287 SM01005 Alanine racemase, C-terminal domain BF37_1292 SM00487 DEAD-like helicases superfamily BF37_1292 SM00490 helicase superfamily c-terminal domain BF37_13 SM00316 Ribosomal protein S1-like RNA-binding domain BF37_1307 SM00382 ATPases associated with a variety of cellular activities BF37_1308 SM00382 ATPases associated with a variety of cellular activities BF37_1314 SM00382 ATPases associated with a variety of cellular activities BF37_1324 SM00354 helix_turn _helix lactose operon repressor BF37_1326 SM00563 Phosphate acyltransferases BF37_1345 SM00342 helix_turn_helix, arabinose operon control protein BF37_1348 SM00382 ATPases associated with a variety of cellular activities BF37_1349 SM00382 ATPases associated with a variety of cellular activities BF37_1359 SM00829 Enoylreductase BF37_1361 SM00382 ATPases associated with a variety of cellular activities BF37_1361 SM00930 BF37_1361 BF37_1372 SM01350 BF37_1372 BF37_1376 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF37_1376 SM00895 BF37_1376 BF37_1400 SM01251 BF37_1400 BF37_1403 SM00646 BF37_1403 BF37_1409 SM00382 ATPases associated with a variety of cellular activities BF37_1410 SM00382 ATPases associated with a variety of cellular activities BF37_1412 SM00662 RNA polymerases D BF37_1416 SM00316 Ribosomal protein S1-like RNA-binding domain BF37_1428 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BF37_1429 SM01374 BF37_1429 BF37_1433 SM00322 K homology RNA-binding domain BF37_1436 SM01382 BF37_1436 BF37_1436 SM01383 BF37_1436 BF37_1440 SM01403 BF37_1440 BF37_1442 SM00838 Elongation factor G C-terminus BF37_1442 SM00889 Elongation factor G, domain IV BF37_1446 SM00663 RNA polymerase I subunit A N-terminus BF37_1452 SM00649 Ribosomal protein L11/L12 BF37_1453 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BF37_1455 SM00421 helix_turn_helix, Lux Regulon BF37_1457 SM00967 RNA 2'-O ribose methyltransferase substrate binding BF37_1458 SM00535 Ribonuclease III family BF37_1459 SM00840 BF37_1459 BF37_1464 SM00670 Large family of predicted nucleotide-binding domains BF37_1466 SM00382 ATPases associated with a variety of cellular activities BF37_1467 SM00382 ATPases associated with a variety of cellular activities BF37_1467 SM01086 C-terminal, D2-small domain, of ClpB protein BF37_1477 SM00530 Helix-turn-helix XRE-family like proteins BF37_1479 SM00905 Dihydroneopterin aldolase BF37_1487 SM00382 ATPases associated with a variety of cellular activities BF37_1489 SM00977 TilS substrate C-terminal domain BF37_149 SM00344 helix_turn_helix ASNC type BF37_1490 SM00331 Sigma factor PP2C-like phosphatases BF37_1490 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BF37_1493 SM00316 Ribosomal protein S1-like RNA-binding domain BF37_1497 SM00363 S4 RNA-binding domain BF37_1500 SM00966 SpoVT / AbrB like domain BF37_1501 SM00487 DEAD-like helicases superfamily BF37_1501 SM00490 helicase superfamily c-terminal domain BF37_1501 SM00982 BF37_1501 BF37_1501 SM01058 CarD-like/TRCF domain BF37_1504 SM01400 BF37_1504 BF37_1513 SM00650 Ribosomal RNA adenine dimethylases BF37_1514 SM00493 BF37_1514 BF37_1517 SM00966 SpoVT / AbrB like domain BF37_153 SM00382 ATPases associated with a variety of cellular activities BF37_1535 SM00493 BF37_1535 BF37_1537 SM00382 ATPases associated with a variety of cellular activities BF37_1547 SM00936 Penicillin-binding protein 5, C-terminal domain BF37_1548 SM00116 Domain in cystathionine beta-synthase and other proteins. BF37_1548 SM01240 BF37_1548 BF37_155 SM00382 ATPases associated with a variety of cellular activities BF37_1556 SM00434 DNA Topoisomerase IV BF37_1557 SM00387 Histidine kinase-like ATPases BF37_1557 SM00433 TopoisomeraseII BF37_156 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF37_1560 SM00480 DNA polymerase III beta subunit BF37_1561 SM00382 ATPases associated with a variety of cellular activities BF37_1561 SM00760 Bacterial dnaA protein helix-turn-helix domain BF37_1565 SM00393 Putative single-stranded nucleic acids-binding domain BF37_1565 SM01245 BF37_1565 BF37_1567 SM01228 BF37_1567 BF37_1569 SM00470 ParB-like nuclease domain BF37_1571 SM00470 ParB-like nuclease domain BF37_1580 SM00267 diguanylate cyclase BF37_1583 SM00788 Adenylosuccinate synthetase BF37_1588 SM00448 cheY-homologous receiver domain BF37_1588 SM00862 Transcriptional regulatory protein, C terminal BF37_1589 SM00091 PAS domain BF37_1589 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF37_1589 SM00387 Histidine kinase-like ATPases BF37_1589 SM00388 His Kinase A (phosphoacceptor) domain BF37_159 SM00465 GIY-YIG type nucleases (URI domain) BF37_159 SM00496 Intron-encoded nuclease repeat 2 BF37_1592 SM00849 Metallo-beta-lactamase superfamily BF37_1593 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BF37_1598 SM01240 BF37_1598 BF37_16 SM00870 BF37_16 BF37_1600 SM00487 DEAD-like helicases superfamily BF37_1600 SM00490 helicase superfamily c-terminal domain BF37_1611 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BF37_1611 SM00387 Histidine kinase-like ATPases BF37_1612 SM00448 cheY-homologous receiver domain BF37_1612 SM00850 LytTr DNA-binding domain BF37_1624 SM00382 ATPases associated with a variety of cellular activities BF37_1629 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BF37_1635 SM00448 cheY-homologous receiver domain BF37_1635 SM00850 LytTr DNA-binding domain BF37_1638 SM00267 diguanylate cyclase BF37_1640 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BF37_1642 SM00421 helix_turn_helix, Lux Regulon BF37_1642 SM00448 cheY-homologous receiver domain BF37_1644 SM00100 Cyclic nucleotide-monophosphate binding domain BF37_1652 SM00354 helix_turn _helix lactose operon repressor BF37_1654 SM00382 ATPases associated with a variety of cellular activities BF37_1656 SM00986 Uracil DNA glycosylase superfamily BF37_1656 SM00987 UreE urease accessory protein, C-terminal domain BF37_1665 SM00936 Penicillin-binding protein 5, C-terminal domain BF37_1675 SM00382 ATPases associated with a variety of cellular activities BF37_1677 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BF37_1683 SM00422 helix_turn_helix, mercury resistance BF37_1691 SM00836 DALR anticodon binding domain BF37_1691 SM01016 Arginyl tRNA synthetase N terminal dom BF37_1701 SM00382 ATPases associated with a variety of cellular activities BF37_1703 SM00387 Histidine kinase-like ATPases BF37_1704 SM00421 helix_turn_helix, Lux Regulon BF37_1704 SM00448 cheY-homologous receiver domain BF37_1705 SM00530 Helix-turn-helix XRE-family like proteins BF37_1708 SM00052 Putative diguanylate phosphodiesterase BF37_1708 SM00267 diguanylate cyclase BF37_1710 SM00155 Phospholipase D. Active site motifs. BF37_172 SM00387 Histidine kinase-like ATPases BF37_172 SM00388 His Kinase A (phosphoacceptor) domain BF37_1720 SM00448 cheY-homologous receiver domain BF37_1724 SM00357 Cold shock protein domain BF37_1724 SM00382 ATPases associated with a variety of cellular activities BF37_1724 SM00959 Rho termination factor, N-terminal domain BF37_1727 SM00937 BF37_1727 BF37_1734 SM00903 Flavin reductase like domain BF37_1737 SM00226 Low molecular weight phosphatase family BF37_1750 SM00382 ATPases associated with a variety of cellular activities BF37_1754 SM00052 Putative diguanylate phosphodiesterase BF37_1754 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BF37_1754 SM00091 PAS domain BF37_1754 SM00267 diguanylate cyclase BF37_176 SM00347 helix_turn_helix multiple antibiotic resistance protein BF37_177 SM00387 Histidine kinase-like ATPases BF37_177 SM00388 His Kinase A (phosphoacceptor) domain BF37_1771 SM00850 LytTr DNA-binding domain BF37_1772 SM00382 ATPases associated with a variety of cellular activities BF37_1785 SM00984 UDP binding domain BF37_1793 SM00448 cheY-homologous receiver domain BF37_1793 SM00862 Transcriptional regulatory protein, C terminal BF37_1794 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF37_1794 SM00387 Histidine kinase-like ATPases BF37_1794 SM00388 His Kinase A (phosphoacceptor) domain BF37_1799 SM00530 Helix-turn-helix XRE-family like proteins BF37_18 SM00644 BF37_18 BF37_1801 SM00382 ATPases associated with a variety of cellular activities BF37_1810 SM00487 DEAD-like helicases superfamily BF37_1810 SM00490 helicase superfamily c-terminal domain BF37_1816 SM00287 Bacterial SH3 domain homologues BF37_1822 SM00287 Bacterial SH3 domain homologues BF37_1823 SM00287 Bacterial SH3 domain homologues BF37_183 SM00365 Leucine-rich repeat, SDS22-like subfamily BF37_183 SM00369 Leucine-rich repeats, typical (most populated) subfamily BF37_1854 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. BF37_1855 SM00382 ATPases associated with a variety of cellular activities BF37_1858 SM00984 UDP binding domain BF37_1865 SM00487 DEAD-like helicases superfamily BF37_1865 SM00490 helicase superfamily c-terminal domain BF37_1867 SM00357 Cold shock protein domain BF37_1869 SM00957 SecA DEAD-like domain BF37_1869 SM00958 SecA preprotein cross-linking domain BF37_187 SM00420 helix_turn_helix, Deoxyribose operon repressor BF37_187 SM01134 BF37_187 BF37_1870 SM00937 BF37_1870 BF37_1872 SM00382 ATPases associated with a variety of cellular activities BF37_1874 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BF37_1874 SM00245 tail specific protease BF37_1876 SM00382 ATPases associated with a variety of cellular activities BF37_1878 SM00382 ATPases associated with a variety of cellular activities BF37_1880 SM00422 helix_turn_helix, mercury resistance BF37_1883 SM00530 Helix-turn-helix XRE-family like proteins BF37_1886 SM00422 helix_turn_helix, mercury resistance BF37_1890 SM00487 DEAD-like helicases superfamily BF37_1890 SM00490 helicase superfamily c-terminal domain BF37_1898 SM00028 Tetratricopeptide repeats BF37_1918 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BF37_1922 SM01192 BF37_1922 BF37_1922 SM01193 BF37_1922 BF37_1951 SM00316 Ribosomal protein S1-like RNA-binding domain BF37_1951 SM00357 Cold shock protein domain BF37_1951 SM00955 BF37_1951 BF37_1953 SM00448 cheY-homologous receiver domain BF37_1953 SM00862 Transcriptional regulatory protein, C terminal BF37_1957 SM00382 ATPases associated with a variety of cellular activities BF37_1967 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BF37_1968 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain BF37_1970 SM00363 S4 RNA-binding domain BF37_1977 SM01276 BF37_1977 BF37_1997 SM00347 helix_turn_helix multiple antibiotic resistance protein BF37_2001 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BF37_2001 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF37_2005 SM00387 Histidine kinase-like ATPases BF37_2005 SM00388 His Kinase A (phosphoacceptor) domain BF37_2006 SM00448 cheY-homologous receiver domain BF37_2006 SM00862 Transcriptional regulatory protein, C terminal BF37_2011 SM00530 Helix-turn-helix XRE-family like proteins BF37_2025 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BF37_2025 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF37_203 SM00822 BF37_203 BF37_2034 SM00849 Metallo-beta-lactamase superfamily BF37_2051 SM00493 BF37_2051 BF37_2054 SM00382 ATPases associated with a variety of cellular activities BF37_2054 SM00930 BF37_2054 BF37_2058 SM00382 ATPases associated with a variety of cellular activities BF37_2069 SM00729 Elongator protein 3, MiaB family, Radical SAM BF37_2071 SM00855 Phosphoglycerate mutase family BF37_2074 SM00422 helix_turn_helix, mercury resistance BF37_2081 SM00420 helix_turn_helix, Deoxyribose operon repressor BF37_2094 SM00860 SMI1 / KNR4 family BF37_2099 SM00382 ATPases associated with a variety of cellular activities BF37_21 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BF37_2109 SM00871 Bacterial transcription activator, effector binding domain BF37_2128 SM00479 BF37_2128 BF37_2129 SM01298 BF37_2129 BF37_2136 SM00344 helix_turn_helix ASNC type BF37_2138 SM00316 Ribosomal protein S1-like RNA-binding domain BF37_217 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF37_217 SM00895 BF37_217 BF37_2171 SM00642 Alpha-amylase domain BF37_2179 SM00357 Cold shock protein domain BF37_218 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF37_218 SM00387 Histidine kinase-like ATPases BF37_218 SM00388 His Kinase A (phosphoacceptor) domain BF37_2187 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BF37_2188 SM00448 cheY-homologous receiver domain BF37_2188 SM00862 Transcriptional regulatory protein, C terminal BF37_2189 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF37_2189 SM00387 Histidine kinase-like ATPases BF37_2189 SM00388 His Kinase A (phosphoacceptor) domain BF37_219 SM00448 cheY-homologous receiver domain BF37_219 SM00862 Transcriptional regulatory protein, C terminal BF37_2197 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF37_2197 SM00866 BF37_2197 BF37_2202 SM00382 ATPases associated with a variety of cellular activities BF37_2207 SM00387 Histidine kinase-like ATPases BF37_2208 SM00448 cheY-homologous receiver domain BF37_2208 SM00862 Transcriptional regulatory protein, C terminal BF37_2209 SM00342 helix_turn_helix, arabinose operon control protein BF37_2209 SM00871 Bacterial transcription activator, effector binding domain BF37_2210 SM00382 ATPases associated with a variety of cellular activities BF37_2220 SM00046 Diacylglycerol kinase catalytic domain (presumed) BF37_2226 SM00448 cheY-homologous receiver domain BF37_2226 SM00862 Transcriptional regulatory protein, C terminal BF37_2227 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF37_2227 SM00387 Histidine kinase-like ATPases BF37_2227 SM00388 His Kinase A (phosphoacceptor) domain BF37_2229 SM00899 BF37_2229 BF37_2241 SM00894 Excalibur calcium-binding domain BF37_2245 SM01234 BF37_2245 BF37_2246 SM00947 Carbonic anhydrase BF37_2258 SM00382 ATPases associated with a variety of cellular activities BF37_2267 SM00387 Histidine kinase-like ATPases BF37_2278 SM00852 Probable molybdopterin binding domain BF37_2281 SM00014 Acid phosphatase homologues BF37_2289 SM00382 ATPases associated with a variety of cellular activities BF37_229 SM00014 Acid phosphatase homologues BF37_2291 SM00729 Elongator protein 3, MiaB family, Radical SAM BF37_2295 SM00382 ATPases associated with a variety of cellular activities BF37_23 SM00422 helix_turn_helix, mercury resistance BF37_2310 SM00450 Rhodanese Homology Domain BF37_2314 SM00729 Elongator protein 3, MiaB family, Radical SAM BF37_2317 SM00852 Probable molybdopterin binding domain BF37_2324 SM01058 CarD-like/TRCF domain BF37_2329 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF37_233 SM00382 ATPases associated with a variety of cellular activities BF37_2333 SM00363 S4 RNA-binding domain BF37_2334 SM00420 helix_turn_helix, Deoxyribose operon repressor BF37_2338 SM00642 Alpha-amylase domain BF37_2342 SM00849 Metallo-beta-lactamase superfamily BF37_2350 SM00843 BF37_2350 BF37_236 SM00530 Helix-turn-helix XRE-family like proteins BF37_2361 SM00354 helix_turn _helix lactose operon repressor BF37_2368 SM00248 ankyrin repeats BF37_2369 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF37_2369 SM00387 Histidine kinase-like ATPases BF37_2369 SM00388 His Kinase A (phosphoacceptor) domain BF37_2370 SM00448 cheY-homologous receiver domain BF37_2370 SM00862 Transcriptional regulatory protein, C terminal BF37_2373 SM00116 Domain in cystathionine beta-synthase and other proteins. BF37_2379 SM00363 S4 RNA-binding domain BF37_2382 SM00363 S4 RNA-binding domain BF37_2382 SM01390 BF37_2382 BF37_2391 SM00981 BF37_2391 BF37_2416 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BF37_2416 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BF37_2418 SM00530 Helix-turn-helix XRE-family like proteins BF37_2429 SM00849 Metallo-beta-lactamase superfamily BF37_2431 SM00116 Domain in cystathionine beta-synthase and other proteins. BF37_2438 SM00481 DNA polymerase alpha chain like domain BF37_2439 SM00919 Malic enzyme, NAD binding domain BF37_2439 SM01274 BF37_2439 BF37_2440 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF37_2449 SM01329 BF37_2449 BF37_2453 SM00448 cheY-homologous receiver domain BF37_2453 SM00862 Transcriptional regulatory protein, C terminal BF37_2454 SM00091 PAS domain BF37_2454 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF37_2454 SM00387 Histidine kinase-like ATPases BF37_2454 SM00388 His Kinase A (phosphoacceptor) domain BF37_2455 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BF37_2455 SM00474 3'-5' exonuclease BF37_2455 SM00475 5'-3' exonuclease BF37_2455 SM00482 DNA polymerase A domain BF37_2456 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BF37_2456 SM01232 BF37_2456 BF37_2459 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BF37_2463 SM00382 ATPases associated with a variety of cellular activities BF37_2465 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BF37_2480 SM00967 RNA 2'-O ribose methyltransferase substrate binding BF37_2482 SM00873 B3/4 domain BF37_2482 SM00874 tRNA synthetase B5 domain BF37_2482 SM00896 Ferredoxin-fold anticodon binding domain BF37_2490 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BF37_2490 SM00481 DNA polymerase alpha chain like domain BF37_2490 SM00483 DNA polymerase X family BF37_2491 SM00463 Small MutS-related domain BF37_2491 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BF37_2491 SM00534 ATPase domain of DNA mismatch repair MUTS family BF37_2493 SM00363 S4 RNA-binding domain BF37_2495 SM00725 NEAr Transporter domain BF37_2496 SM00725 NEAr Transporter domain BF37_2497 SM00725 NEAr Transporter domain BF37_25 SM00257 Lysin motif BF37_2500 SM00382 ATPases associated with a variety of cellular activities BF37_2504 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BF37_2507 SM00448 cheY-homologous receiver domain BF37_2507 SM00862 Transcriptional regulatory protein, C terminal BF37_2508 SM00387 Histidine kinase-like ATPases BF37_2508 SM00388 His Kinase A (phosphoacceptor) domain BF37_2509 SM00382 ATPases associated with a variety of cellular activities BF37_2522 SM00893 Electron transfer flavoprotein domain BF37_2523 SM00893 Electron transfer flavoprotein domain BF37_2525 SM00465 GIY-YIG type nucleases (URI domain) BF37_2536 SM00382 ATPases associated with a variety of cellular activities BF37_254 SM00530 Helix-turn-helix XRE-family like proteins BF37_2541 SM00530 Helix-turn-helix XRE-family like proteins BF37_2545 SM00342 helix_turn_helix, arabinose operon control protein BF37_2545 SM00448 cheY-homologous receiver domain BF37_2547 SM00382 ATPases associated with a variety of cellular activities BF37_2548 SM00382 ATPases associated with a variety of cellular activities BF37_255 SM00861 Transketolase, pyrimidine binding domain BF37_2556 SM00421 helix_turn_helix, Lux Regulon BF37_2563 SM00909 Sporulation and spore germination BF37_2575 SM00382 ATPases associated with a variety of cellular activities BF37_2575 SM00994 ClpX C4-type zinc finger BF37_2575 SM01086 C-terminal, D2-small domain, of ClpB protein BF37_2576 SM00382 ATPases associated with a variety of cellular activities BF37_2577 SM00382 ATPases associated with a variety of cellular activities BF37_2577 SM00464 Found in ATP-dependent protease La (LON) BF37_2580 SM00347 helix_turn_helix multiple antibiotic resistance protein BF37_2585 SM01004 Delta-aminolevulinic acid dehydratase BF37_2587 SM00257 Lysin motif BF37_2605 SM01317 BF37_2605 BF37_2607 SM00448 cheY-homologous receiver domain BF37_2607 SM00862 Transcriptional regulatory protein, C terminal BF37_2609 SM00387 Histidine kinase-like ATPases BF37_2610 SM00382 ATPases associated with a variety of cellular activities BF37_2620 SM00257 Lysin motif BF37_2623 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF37_2628 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BF37_2629 SM00382 ATPases associated with a variety of cellular activities BF37_2633 SM01323 BF37_2633 BF37_2642 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BF37_2642 SM00954 Region found in RelA / SpoT proteins BF37_2649 SM00382 ATPases associated with a variety of cellular activities BF37_2653 SM00028 Tetratricopeptide repeats BF37_2660 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BF37_2662 SM00732 Likely ribonuclease with RNase H fold. BF37_2681 SM00382 ATPases associated with a variety of cellular activities BF37_2686 SM00530 Helix-turn-helix XRE-family like proteins BF37_2696 SM00855 Phosphoglycerate mutase family BF37_27 SM00487 DEAD-like helicases superfamily BF37_27 SM00490 helicase superfamily c-terminal domain BF37_2701 SM00098 Alkaline phosphatase homologues BF37_2703 SM00954 Region found in RelA / SpoT proteins BF37_2714 SM01103 BF37_2714 BF37_2716 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BF37_2720 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BF37_2722 SM00849 Metallo-beta-lactamase superfamily BF37_2728 SM00838 Elongation factor G C-terminus BF37_2730 SM00729 Elongator protein 3, MiaB family, Radical SAM BF37_2734 SM00271 DnaJ molecular chaperone homology domain BF37_2737 SM00729 Elongator protein 3, MiaB family, Radical SAM BF37_2743 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BF37_2750 SM00116 Domain in cystathionine beta-synthase and other proteins. BF37_2752 SM00400 zinc finger BF37_2752 SM00493 BF37_2752 BF37_2752 SM00766 DNA primase DnaG DnaB-binding BF37_2759 SM00487 DEAD-like helicases superfamily BF37_2759 SM00490 helicase superfamily c-terminal domain BF37_2760 SM00518 AP endonuclease family 2 BF37_2763 SM00382 ATPases associated with a variety of cellular activities BF37_277 SM00635 Bacterial Ig-like domain 2 BF37_2776 SM00382 ATPases associated with a variety of cellular activities BF37_2784 SM00849 Metallo-beta-lactamase superfamily BF37_2786 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF37_2791 SM01018 B12 binding domain BF37_2802 SM00382 ATPases associated with a variety of cellular activities BF37_2809 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. BF37_2816 SM00487 DEAD-like helicases superfamily BF37_2816 SM00490 helicase superfamily c-terminal domain BF37_2822 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF37_2823 SM00382 ATPases associated with a variety of cellular activities BF37_2833 SM00354 helix_turn _helix lactose operon repressor BF37_2834 SM00450 Rhodanese Homology Domain BF37_2838 SM00529 Helix-turn-helix diphteria tox regulatory element BF37_2845 SM00841 Elongation factor P, C-terminal BF37_2845 SM01185 BF37_2845 BF37_2849 SM00382 ATPases associated with a variety of cellular activities BF37_2859 SM00878 Biotin carboxylase C-terminal domain BF37_2866 SM00861 Transketolase, pyrimidine binding domain BF37_2867 SM00363 S4 RNA-binding domain BF37_2870 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BF37_2871 SM00448 cheY-homologous receiver domain BF37_2876 SM00091 PAS domain BF37_2876 SM00382 ATPases associated with a variety of cellular activities BF37_2878 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BF37_2882 SM00861 Transketolase, pyrimidine binding domain BF37_2888 SM00062 Bacterial periplasmic substrate-binding proteins BF37_2888 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BF37_2890 SM00382 ATPases associated with a variety of cellular activities BF37_2900 SM00849 Metallo-beta-lactamase superfamily BF37_2908 SM00859 Semialdehyde dehydrogenase, NAD binding domain BF37_2915 SM00347 helix_turn_helix multiple antibiotic resistance protein BF37_2925 SM00729 Elongator protein 3, MiaB family, Radical SAM BF37_2925 SM00876 Biotin and Thiamin Synthesis associated domain BF37_2931 SM00704 CDGSH-type zinc finger. Function unknown. BF37_2935 SM00354 helix_turn _helix lactose operon repressor BF37_2954 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BF37_2958 SM00347 helix_turn_helix multiple antibiotic resistance protein BF37_2962 SM00382 ATPases associated with a variety of cellular activities BF37_2963 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF37_2964 SM00936 Penicillin-binding protein 5, C-terminal domain BF37_2966 SM00387 Histidine kinase-like ATPases BF37_2985 SM00849 Metallo-beta-lactamase superfamily BF37_2988 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF37_2988 SM00866 BF37_2988 BF37_2990 SM01061 CAT RNA binding domain BF37_2997 SM00267 diguanylate cyclase BF37_3003 SM01007 Class II Aldolase and Adducin N-terminal domain BF37_3020 SM00382 ATPases associated with a variety of cellular activities BF37_3027 SM00382 ATPases associated with a variety of cellular activities BF37_3028 SM00642 Alpha-amylase domain BF37_3029 SM00642 Alpha-amylase domain BF37_3033 SM00354 helix_turn _helix lactose operon repressor BF37_3036 SM00387 Histidine kinase-like ATPases BF37_3036 SM00388 His Kinase A (phosphoacceptor) domain BF37_3045 SM00267 diguanylate cyclase BF37_3053 SM00052 Putative diguanylate phosphodiesterase BF37_3066 SM00849 Metallo-beta-lactamase superfamily BF37_3072 SM00861 Transketolase, pyrimidine binding domain BF37_308 SM00954 Region found in RelA / SpoT proteins BF37_3088 SM00838 Elongation factor G C-terminus BF37_3093 SM00670 Large family of predicted nucleotide-binding domains BF37_3097 SM00878 Biotin carboxylase C-terminal domain BF37_310 SM01118 BF37_310 BF37_3110 SM00855 Phosphoglycerate mutase family BF37_3119 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BF37_3125 SM00530 Helix-turn-helix XRE-family like proteins BF37_3129 SM00530 Helix-turn-helix XRE-family like proteins BF37_3130 SM00530 Helix-turn-helix XRE-family like proteins BF37_3135 SM00382 ATPases associated with a variety of cellular activities BF37_3149 SM00530 Helix-turn-helix XRE-family like proteins BF37_3159 SM00507 HNH nucleases BF37_316 SM00155 Phospholipase D. Active site motifs. BF37_3181 SM00644 BF37_3181 BF37_3184 SM00530 Helix-turn-helix XRE-family like proteins BF37_3192 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains BF37_3198 SM00740 BF37_3198 BF37_3199 SM00740 BF37_3199 BF37_32 SM00257 Lysin motif BF37_3207 SM00842 Cell division protein FtsA BF37_3208 SM00864 Tubulin/FtsZ family, GTPase domain BF37_3208 SM00865 Tubulin/FtsZ family, C-terminal domain BF37_3217 SM00363 S4 RNA-binding domain BF37_3222 SM00363 S4 RNA-binding domain BF37_3227 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BF37_3228 SM00851 MGS-like domain BF37_3228 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BF37_3228 SM01209 BF37_3228 BF37_323 SM00382 ATPases associated with a variety of cellular activities BF37_3231 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BF37_324 SM00382 ATPases associated with a variety of cellular activities BF37_3240 SM00831 Cation transporter/ATPase, N-terminus BF37_3243 SM00072 Guanylate kinase homologues. BF37_3244 SM01409 BF37_3244 BF37_3246 SM00487 DEAD-like helicases superfamily BF37_3246 SM00490 helicase superfamily c-terminal domain BF37_3251 SM00331 Sigma factor PP2C-like phosphatases BF37_3251 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BF37_3252 SM00220 Serine/Threonine protein kinases, catalytic domain BF37_3252 SM00740 BF37_3252 BF37_3255 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain BF37_3258 SM01120 BF37_3258 BF37_3258 SM01121 BF37_3258 BF37_3259 SM00487 DEAD-like helicases superfamily BF37_3259 SM00490 helicase superfamily c-terminal domain BF37_3262 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BF37_3263 SM00822 BF37_3263 BF37_3265 SM00358 Double-stranded RNA binding motif BF37_3265 SM00535 Ribonuclease III family BF37_3266 SM00968 SMC proteins Flexible Hinge Domain BF37_3267 SM00382 ATPases associated with a variety of cellular activities BF37_3267 SM00962 SRP54-type protein, GTPase domain BF37_3267 SM00963 SRP54-type protein, helical bundle domain BF37_3269 SM00382 ATPases associated with a variety of cellular activities BF37_3269 SM00962 SRP54-type protein, GTPase domain BF37_3269 SM00963 SRP54-type protein, helical bundle domain BF37_3279 SM00881 CoA binding domain BF37_3281 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BF37_3281 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BF37_3281 SM00493 BF37_3281 BF37_3285 SM00382 ATPases associated with a variety of cellular activities BF37_3285 SM01086 C-terminal, D2-small domain, of ClpB protein BF37_3294 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BF37_3296 SM00479 BF37_3296 BF37_3296 SM00481 DNA polymerase alpha chain like domain BF37_3298 SM00316 Ribosomal protein S1-like RNA-binding domain BF37_3298 SM00322 K homology RNA-binding domain BF37_3305 SM00904 Riboflavin kinase BF37_3306 SM01387 BF37_3306 BF37_3307 SM00316 Ribosomal protein S1-like RNA-binding domain BF37_3307 SM00322 K homology RNA-binding domain BF37_3313 SM00859 Semialdehyde dehydrogenase, NAD binding domain BF37_3315 SM01130 BF37_3315 BF37_3316 SM00849 Metallo-beta-lactamase superfamily BF37_3319 SM00382 ATPases associated with a variety of cellular activities BF37_3319 SM00843 BF37_3319 BF37_332 SM00825 Beta-ketoacyl synthase BF37_3320 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF37_3320 SM00866 BF37_3320 BF37_3322 SM00382 ATPases associated with a variety of cellular activities BF37_3333 SM00852 Probable molybdopterin binding domain BF37_3334 SM00382 ATPases associated with a variety of cellular activities BF37_3336 SM00322 K homology RNA-binding domain BF37_3336 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BF37_3342 SM00729 Elongator protein 3, MiaB family, Radical SAM BF37_3345 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BF37_3345 SM00534 ATPase domain of DNA mismatch repair MUTS family BF37_3346 SM00853 MutL C terminal dimerisation domain BF37_3346 SM01340 BF37_3346 BF37_3347 SM00382 ATPases associated with a variety of cellular activities BF37_3350 SM00448 cheY-homologous receiver domain BF37_3350 SM00862 Transcriptional regulatory protein, C terminal BF37_3351 SM00387 Histidine kinase-like ATPases BF37_3351 SM00388 His Kinase A (phosphoacceptor) domain BF37_3357 SM00257 Lysin motif BF37_3359 SM00148 Phospholipase C, catalytic domain (part); domain X BF37_3363 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF37_3369 SM00052 Putative diguanylate phosphodiesterase BF37_3369 SM00091 PAS domain BF37_3369 SM00267 diguanylate cyclase BF37_3376 SM00478 endonuclease III BF37_3379 SM00342 helix_turn_helix, arabinose operon control protein BF37_338 SM00382 ATPases associated with a variety of cellular activities BF37_338 SM01086 C-terminal, D2-small domain, of ClpB protein BF37_3385 SM00382 ATPases associated with a variety of cellular activities BF37_3392 SM00411 bacterial (prokaryotic) histone like domain BF37_3396 SM00636 BF37_3396 BF37_34 SM00091 PAS domain BF37_34 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF37_34 SM00387 Histidine kinase-like ATPases BF37_34 SM00388 His Kinase A (phosphoacceptor) domain BF37_3403 SM00420 helix_turn_helix, Deoxyribose operon repressor BF37_3403 SM01134 BF37_3403 BF37_3406 SM00287 Bacterial SH3 domain homologues BF37_3413 SM00382 ATPases associated with a variety of cellular activities BF37_3418 SM00422 helix_turn_helix, mercury resistance BF37_3419 SM01230 BF37_3419 BF37_3424 SM00530 Helix-turn-helix XRE-family like proteins BF37_3425 SM00530 Helix-turn-helix XRE-family like proteins BF37_3436 SM00382 ATPases associated with a variety of cellular activities BF37_3451 SM00530 Helix-turn-helix XRE-family like proteins BF37_347 SM00316 Ribosomal protein S1-like RNA-binding domain BF37_3482 SM00287 Bacterial SH3 domain homologues BF37_3482 SM00644 BF37_3482 BF37_3488 SM00028 Tetratricopeptide repeats BF37_3494 SM00857 Resolvase, N terminal domain BF37_3498 SM00062 Bacterial periplasmic substrate-binding proteins BF37_3499 SM00382 ATPases associated with a variety of cellular activities BF37_35 SM00448 cheY-homologous receiver domain BF37_35 SM00862 Transcriptional regulatory protein, C terminal BF37_3503 SM00861 Transketolase, pyrimidine binding domain BF37_3506 SM00382 ATPases associated with a variety of cellular activities BF37_3507 SM00382 ATPases associated with a variety of cellular activities BF37_351 SM00642 Alpha-amylase domain BF37_3510 SM00644 BF37_3510 BF37_353 SM01060 BF37_353 BF37_3536 SM01058 CarD-like/TRCF domain BF37_3542 SM00091 PAS domain BF37_3542 SM00387 Histidine kinase-like ATPases BF37_3542 SM00388 His Kinase A (phosphoacceptor) domain BF37_3545 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BF37_3546 SM00644 BF37_3546 BF37_3546 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. BF37_3559 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BF37_3567 SM00382 ATPases associated with a variety of cellular activities BF37_3570 SM00479 BF37_3570 BF37_3574 SM00257 Lysin motif BF37_3574 SM00636 BF37_3574 BF37_3577 SM01207 BF37_3577 BF37_3580 SM00448 cheY-homologous receiver domain BF37_3580 SM00862 Transcriptional regulatory protein, C terminal BF37_3581 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BF37_3582 SM00881 CoA binding domain BF37_3583 SM00387 Histidine kinase-like ATPases BF37_3583 SM00433 TopoisomeraseII BF37_3584 SM00434 DNA Topoisomerase IV BF37_3587 SM00382 ATPases associated with a variety of cellular activities BF37_3609 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BF37_3609 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BF37_3613 SM00729 Elongator protein 3, MiaB family, Radical SAM BF37_3616 SM00852 Probable molybdopterin binding domain BF37_3639 SM01022 BF37_3639 BF37_3644 SM00357 Cold shock protein domain BF37_3645 SM00479 BF37_3645 BF37_3654 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BF37_3669 SM00028 Tetratricopeptide repeats BF37_3671 SM00829 Enoylreductase BF37_3672 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF37_3685 SM00642 Alpha-amylase domain BF37_3687 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BF37_3687 SM00534 ATPase domain of DNA mismatch repair MUTS family BF37_3689 SM00855 Phosphoglycerate mutase family BF37_3690 SM00829 Enoylreductase BF37_3715 SM00829 Enoylreductase BF37_3716 SM00849 Metallo-beta-lactamase superfamily BF37_3729 SM00641 Glycosyl hydrolases family 25 BF37_3730 SM00849 Metallo-beta-lactamase superfamily BF37_3736 SM00382 ATPases associated with a variety of cellular activities BF37_3740 SM00871 Bacterial transcription activator, effector binding domain BF37_3748 SM00636 BF37_3748 BF37_3749 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF37_375 SM00357 Cold shock protein domain BF37_3750 SM00248 ankyrin repeats BF37_3763 SM00849 Metallo-beta-lactamase superfamily BF37_3771 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF37_3771 SM00866 BF37_3771 BF37_3778 SM00914 BF37_3778 BF37_3787 SM01276 BF37_3787 BF37_3790 SM00829 Enoylreductase BF37_3793 SM00829 Enoylreductase BF37_3796 SM00861 Transketolase, pyrimidine binding domain BF37_3797 SM01350 BF37_3797 BF37_3805 SM00422 helix_turn_helix, mercury resistance BF37_3806 SM01091 Transporter associated domain BF37_3811 SM00028 Tetratricopeptide repeats BF37_3822 SM00382 ATPases associated with a variety of cellular activities BF37_3824 SM01266 BF37_3824 BF37_3835 SM00530 Helix-turn-helix XRE-family like proteins BF37_3839 SM00382 ATPases associated with a variety of cellular activities BF37_3851 SM01207 BF37_3851 BF37_3852 SM00530 Helix-turn-helix XRE-family like proteins BF37_3861 SM00382 ATPases associated with a variety of cellular activities BF37_3874 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF37_3876 SM00382 ATPases associated with a variety of cellular activities BF37_3881 SM00347 helix_turn_helix multiple antibiotic resistance protein BF37_3891 SM00287 Bacterial SH3 domain homologues BF37_3894 SM00342 helix_turn_helix, arabinose operon control protein BF37_39 SM00363 S4 RNA-binding domain BF37_390 SM00448 cheY-homologous receiver domain BF37_390 SM00862 Transcriptional regulatory protein, C terminal BF37_3906 SM00344 helix_turn_helix ASNC type BF37_391 SM00387 Histidine kinase-like ATPases BF37_391 SM00388 His Kinase A (phosphoacceptor) domain BF37_3914 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF37_3920 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BF37_3925 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BF37_3925 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF37_3925 SM00319 Homologues of the ligand binding domain of Tar BF37_3932 SM00028 Tetratricopeptide repeats BF37_3933 SM00354 helix_turn _helix lactose operon repressor BF37_394 SM00342 helix_turn_helix, arabinose operon control protein BF37_394 SM00871 Bacterial transcription activator, effector binding domain BF37_3952 SM00347 helix_turn_helix multiple antibiotic resistance protein BF37_3954 SM00448 cheY-homologous receiver domain BF37_3954 SM00862 Transcriptional regulatory protein, C terminal BF37_3955 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF37_3955 SM00387 Histidine kinase-like ATPases BF37_3955 SM00388 His Kinase A (phosphoacceptor) domain BF37_3957 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF37_3959 SM00382 ATPases associated with a variety of cellular activities BF37_3969 SM00530 Helix-turn-helix XRE-family like proteins BF37_397 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BF37_3980 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF37_3980 SM00387 Histidine kinase-like ATPases BF37_3980 SM00388 His Kinase A (phosphoacceptor) domain BF37_3981 SM00448 cheY-homologous receiver domain BF37_3981 SM00862 Transcriptional regulatory protein, C terminal BF37_3988 SM00347 helix_turn_helix multiple antibiotic resistance protein BF37_4001 SM00344 helix_turn_helix ASNC type BF37_4009 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF37_4012 SM00226 Low molecular weight phosphatase family BF37_4017 SM00382 ATPases associated with a variety of cellular activities BF37_4044 SM01060 BF37_4044 BF37_4055 SM00387 Histidine kinase-like ATPases BF37_4056 SM00448 cheY-homologous receiver domain BF37_4063 SM00919 Malic enzyme, NAD binding domain BF37_4063 SM01274 BF37_4063 BF37_4070 SM00530 Helix-turn-helix XRE-family like proteins BF37_4071 SM00870 BF37_4071 BF37_4089 SM00849 Metallo-beta-lactamase superfamily BF37_409 SM00725 NEAr Transporter domain BF37_4102 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF37_4106 SM00346 helix_turn_helix isocitrate lyase regulation BF37_4107 SM00796 Allophanate hydrolase subunit 1 BF37_4108 SM00797 Allophanate hydrolase subunit 2 BF37_4135 SM00448 cheY-homologous receiver domain BF37_4135 SM00862 Transcriptional regulatory protein, C terminal BF37_4136 SM00387 Histidine kinase-like ATPases BF37_4136 SM00388 His Kinase A (phosphoacceptor) domain BF37_414 SM00849 Metallo-beta-lactamase superfamily BF37_4140 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF37_4145 SM00342 helix_turn_helix, arabinose operon control protein BF37_4145 SM00871 Bacterial transcription activator, effector binding domain BF37_4150 SM00382 ATPases associated with a variety of cellular activities BF37_4152 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF37_4153 SM00382 ATPases associated with a variety of cellular activities BF37_4158 SM00889 Elongation factor G, domain IV BF37_4159 SM00347 helix_turn_helix multiple antibiotic resistance protein BF37_416 SM00354 helix_turn _helix lactose operon repressor BF37_4170 SM01060 BF37_4170 BF37_4190 SM00850 LytTr DNA-binding domain BF37_4195 SM00530 Helix-turn-helix XRE-family like proteins BF37_4197 SM00098 Alkaline phosphatase homologues BF37_4201 SM00346 helix_turn_helix isocitrate lyase regulation BF37_4204 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BF37_4208 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF37_4214 SM01133 BF37_4214 BF37_4219 SM00382 ATPases associated with a variety of cellular activities BF37_4230 SM00287 Bacterial SH3 domain homologues BF37_4238 SM00830 Chorismate mutase type II BF37_4248 SM00382 ATPases associated with a variety of cellular activities BF37_4266 SM00028 Tetratricopeptide repeats BF37_4272 SM00382 ATPases associated with a variety of cellular activities BF37_4273 SM00062 Bacterial periplasmic substrate-binding proteins BF37_4284 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF37_4286 SM00382 ATPases associated with a variety of cellular activities BF37_4325 SM00448 cheY-homologous receiver domain BF37_4325 SM00862 Transcriptional regulatory protein, C terminal BF37_4326 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF37_4326 SM00387 Histidine kinase-like ATPases BF37_4326 SM00388 His Kinase A (phosphoacceptor) domain BF37_4327 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BF37_4335 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BF37_4348 SM00091 PAS domain BF37_4348 SM00382 ATPases associated with a variety of cellular activities BF37_4352 SM01130 BF37_4352 BF37_4358 SM01131 BF37_4358 BF37_4365 SM00341 Helicase and RNase D C-terminal BF37_4365 SM00487 DEAD-like helicases superfamily BF37_4365 SM00490 helicase superfamily c-terminal domain BF37_4365 SM00956 BF37_4365 BF37_437 SM00422 helix_turn_helix, mercury resistance BF37_4379 SM00849 Metallo-beta-lactamase superfamily BF37_4388 SM00060 Fibronectin type 3 domain BF37_4388 SM00495 Chitin-binding domain type 3 BF37_4395 SM00116 Domain in cystathionine beta-synthase and other proteins. BF37_4395 SM00382 ATPases associated with a variety of cellular activities BF37_4406 SM00861 Transketolase, pyrimidine binding domain BF37_4416 SM00420 helix_turn_helix, Deoxyribose operon repressor BF37_4416 SM01134 BF37_4416 BF37_4420 SM00382 ATPases associated with a variety of cellular activities BF37_4443 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF37_4447 SM00871 Bacterial transcription activator, effector binding domain BF37_4473 SM00465 GIY-YIG type nucleases (URI domain) BF37_4495 SM00480 DNA polymerase III beta subunit BF37_4506 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF37_4515 SM00422 helix_turn_helix, mercury resistance BF37_452 SM00382 ATPases associated with a variety of cellular activities BF37_4527 SM00740 BF37_4527 BF37_4532 SM00387 Histidine kinase-like ATPases BF37_4532 SM00388 His Kinase A (phosphoacceptor) domain BF37_4535 SM00382 ATPases associated with a variety of cellular activities BF37_4540 SM00091 PAS domain BF37_4540 SM00387 Histidine kinase-like ATPases BF37_4540 SM00388 His Kinase A (phosphoacceptor) domain BF37_455 SM00347 helix_turn_helix multiple antibiotic resistance protein BF37_4567 SM01209 BF37_4567 BF37_4568 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF37_4575 SM00382 ATPases associated with a variety of cellular activities BF37_4578 SM00382 ATPases associated with a variety of cellular activities BF37_4580 SM00387 Histidine kinase-like ATPases BF37_4582 SM00448 cheY-homologous receiver domain BF37_4582 SM00862 Transcriptional regulatory protein, C terminal BF37_4593 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF37_4596 SM00342 helix_turn_helix, arabinose operon control protein BF37_4602 SM00422 helix_turn_helix, mercury resistance BF37_4602 SM00871 Bacterial transcription activator, effector binding domain BF37_4606 SM00382 ATPases associated with a variety of cellular activities BF37_4618 SM00448 cheY-homologous receiver domain BF37_4618 SM00862 Transcriptional regulatory protein, C terminal BF37_4619 SM00387 Histidine kinase-like ATPases BF37_4619 SM00388 His Kinase A (phosphoacceptor) domain BF37_4631 SM00878 Biotin carboxylase C-terminal domain BF37_4637 SM00382 ATPases associated with a variety of cellular activities BF37_464 SM00347 helix_turn_helix multiple antibiotic resistance protein BF37_4640 SM00450 Rhodanese Homology Domain BF37_4640 SM00849 Metallo-beta-lactamase superfamily BF37_4642 SM00860 SMI1 / KNR4 family BF37_4644 SM00052 Putative diguanylate phosphodiesterase BF37_4644 SM00091 PAS domain BF37_4644 SM00267 diguanylate cyclase BF37_4646 SM00382 ATPases associated with a variety of cellular activities BF37_4650 SM00646 BF37_4650 BF37_4655 SM00530 Helix-turn-helix XRE-family like proteins BF37_4671 SM00354 helix_turn _helix lactose operon repressor BF37_4672 SM00014 Acid phosphatase homologues BF37_4687 SM00855 Phosphoglycerate mutase family BF37_4688 SM00347 helix_turn_helix multiple antibiotic resistance protein BF37_4693 SM00382 ATPases associated with a variety of cellular activities BF37_4698 SM00487 DEAD-like helicases superfamily BF37_4698 SM00490 helicase superfamily c-terminal domain BF37_4701 SM00849 Metallo-beta-lactamase superfamily BF37_4705 SM01207 BF37_4705 BF37_4721 SM00530 Helix-turn-helix XRE-family like proteins BF37_4723 SM00646 BF37_4723 BF37_4725 SM00382 ATPases associated with a variety of cellular activities BF37_4726 SM00382 ATPases associated with a variety of cellular activities BF37_4733 SM00859 Semialdehyde dehydrogenase, NAD binding domain BF37_474 SM00530 Helix-turn-helix XRE-family like proteins BF37_4746 SM00357 Cold shock protein domain BF37_4754 SM00530 Helix-turn-helix XRE-family like proteins BF37_4759 SM01059 Chloramphenicol acetyltransferase BF37_4763 SM00849 Metallo-beta-lactamase superfamily BF37_4769 SM00849 Metallo-beta-lactamase superfamily BF37_4782 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BF37_4783 SM00363 S4 RNA-binding domain BF37_479 SM00028 Tetratricopeptide repeats BF37_4791 SM00411 bacterial (prokaryotic) histone like domain BF37_4795 SM00923 MbtH-like protein BF37_4796 SM00823 Phosphopantetheine attachment site BF37_4796 SM00824 Thioesterase BF37_4803 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF37_4831 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. BF37_484 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BF37_4842 SM00530 Helix-turn-helix XRE-family like proteins BF37_4847 SM00860 SMI1 / KNR4 family BF37_4849 SM00014 Acid phosphatase homologues BF37_4852 SM00219 Tyrosine kinase, catalytic domain BF37_4860 SM00382 ATPases associated with a variety of cellular activities BF37_4863 SM00882 Coenzyme A transferase BF37_4864 SM00882 Coenzyme A transferase BF37_4867 SM00387 Histidine kinase-like ATPases BF37_4867 SM00388 His Kinase A (phosphoacceptor) domain BF37_4870 SM01091 Transporter associated domain BF37_4878 SM00382 ATPases associated with a variety of cellular activities BF37_4893 SM00829 Enoylreductase BF37_4896 SM00421 helix_turn_helix, Lux Regulon BF37_4896 SM00448 cheY-homologous receiver domain BF37_4897 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BF37_4919 SM00563 Phosphate acyltransferases BF37_492 SM00829 Enoylreductase BF37_4931 SM00382 ATPases associated with a variety of cellular activities BF37_4947 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF37_4947 SM00387 Histidine kinase-like ATPases BF37_4947 SM00388 His Kinase A (phosphoacceptor) domain BF37_4948 SM00448 cheY-homologous receiver domain BF37_4948 SM00862 Transcriptional regulatory protein, C terminal BF37_4959 SM00857 Resolvase, N terminal domain BF37_4966 SM00028 Tetratricopeptide repeats BF37_4968 SM00382 ATPases associated with a variety of cellular activities BF37_4971 SM00327 von Willebrand factor (vWF) type A domain BF37_4977 SM00028 Tetratricopeptide repeats BF37_4978 SM00028 Tetratricopeptide repeats BF37_4982 SM00836 DALR anticodon binding domain BF37_4982 SM01016 Arginyl tRNA synthetase N terminal dom BF37_4986 SM00567 E-Z type HEAT repeats BF37_4986 SM00932 Scaffold protein Nfu/NifU N terminal BF37_499 SM00387 Histidine kinase-like ATPases BF37_499 SM00388 His Kinase A (phosphoacceptor) domain BF37_499 SM00448 cheY-homologous receiver domain BF37_4993 SM00382 ATPases associated with a variety of cellular activities BF37_4994 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BF37_500 SM00138 Methyltransferase, chemotaxis proteins BF37_5005 SM00894 Excalibur calcium-binding domain BF37_501 SM00331 Sigma factor PP2C-like phosphatases BF37_501 SM00448 cheY-homologous receiver domain BF37_5018 SM00852 Probable molybdopterin binding domain BF37_5020 SM00729 Elongator protein 3, MiaB family, Radical SAM BF37_5021 SM00100 Cyclic nucleotide-monophosphate binding domain BF37_5021 SM00419 helix_turn_helix, cAMP Regulatory protein BF37_5023 SM00382 ATPases associated with a variety of cellular activities BF37_5024 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF37_5028 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BF37_5033 SM00460 Transglutaminase/protease-like homologues BF37_5036 SM00849 Metallo-beta-lactamase superfamily BF37_5040 SM00829 Enoylreductase BF37_5044 SM00487 DEAD-like helicases superfamily BF37_5044 SM00490 helicase superfamily c-terminal domain BF37_5067 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF37_5073 SM01005 Alanine racemase, C-terminal domain BF37_5076 SM00855 Phosphoglycerate mutase family BF37_5077 SM00244 prohibitin homologues BF37_5092 SM01091 Transporter associated domain BF37_5097 SM00155 Phospholipase D. Active site motifs. BF37_51 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF37_51 SM00387 Histidine kinase-like ATPases BF37_51 SM00388 His Kinase A (phosphoacceptor) domain BF37_5107 SM00855 Phosphoglycerate mutase family BF37_5128 SM00833 Cobalamin synthesis protein cobW C-terminal domain BF37_513 SM00460 Transglutaminase/protease-like homologues BF37_5140 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BF37_5140 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF37_5147 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF37_5149 SM00966 SpoVT / AbrB like domain BF37_5155 SM00460 Transglutaminase/protease-like homologues BF37_5174 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF37_5174 SM00387 Histidine kinase-like ATPases BF37_5174 SM00388 His Kinase A (phosphoacceptor) domain BF37_5175 SM00448 cheY-homologous receiver domain BF37_5175 SM00862 Transcriptional regulatory protein, C terminal BF37_518 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BF37_5190 SM00387 Histidine kinase-like ATPases BF37_5190 SM00388 His Kinase A (phosphoacceptor) domain BF37_5191 SM00448 cheY-homologous receiver domain BF37_5191 SM00862 Transcriptional regulatory protein, C terminal BF37_5192 SM00382 ATPases associated with a variety of cellular activities BF37_5195 SM00287 Bacterial SH3 domain homologues BF37_5201 SM00382 ATPases associated with a variety of cellular activities BF37_5202 SM00382 ATPases associated with a variety of cellular activities BF37_5206 SM00347 helix_turn_helix multiple antibiotic resistance protein BF37_5213 SM00382 ATPases associated with a variety of cellular activities BF37_5214 SM00382 ATPases associated with a variety of cellular activities BF37_5221 SM00833 Cobalamin synthesis protein cobW C-terminal domain BF37_5241 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BF37_5241 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BF37_5241 SM00493 BF37_5241 BF37_5243 SM00287 Bacterial SH3 domain homologues BF37_5245 SM01011 Aminopeptidase P, N-terminal domain BF37_525 SM01120 BF37_525 BF37_5251 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BF37_5253 SM01133 BF37_5253 BF37_5264 SM00450 Rhodanese Homology Domain BF37_5267 SM00387 Histidine kinase-like ATPases BF37_5267 SM00388 His Kinase A (phosphoacceptor) domain BF37_5268 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF37_5269 SM00448 cheY-homologous receiver domain BF37_5269 SM00862 Transcriptional regulatory protein, C terminal BF37_5271 SM00729 Elongator protein 3, MiaB family, Radical SAM BF37_5282 SM00850 LytTr DNA-binding domain BF37_5288 SM00854 Bacterial capsule synthesis protein PGA_cap BF37_532 SM00347 helix_turn_helix multiple antibiotic resistance protein BF37_5325 SM00047 Lysozyme subfamily 2 BF37_5326 SM00646 BF37_5326 BF37_5338 SM00487 DEAD-like helicases superfamily BF37_5338 SM00490 helicase superfamily c-terminal domain BF37_5339 SM00448 cheY-homologous receiver domain BF37_5340 SM00387 Histidine kinase-like ATPases BF37_5341 SM00919 Malic enzyme, NAD binding domain BF37_5341 SM01274 BF37_5341 BF37_5345 SM00155 Phospholipase D. Active site motifs. BF37_5348 SM00382 ATPases associated with a variety of cellular activities BF37_5350 SM00421 helix_turn_helix, Lux Regulon BF37_5350 SM00448 cheY-homologous receiver domain BF37_5359 SM00530 Helix-turn-helix XRE-family like proteins BF37_5377 SM00833 Cobalamin synthesis protein cobW C-terminal domain BF37_5379 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF37_5379 SM00895 BF37_5379 BF37_5392 SM00855 Phosphoglycerate mutase family BF37_5395 SM00835 Cupin BF37_5399 SM00849 Metallo-beta-lactamase superfamily BF37_5399 SM01027 Beta-Casp domain BF37_5402 SM00382 ATPases associated with a variety of cellular activities BF37_5406 SM00530 Helix-turn-helix XRE-family like proteins BF37_5417 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BF37_5419 SM00382 ATPases associated with a variety of cellular activities BF37_5419 SM00962 SRP54-type protein, GTPase domain BF37_5435 SM00028 Tetratricopeptide repeats BF37_5438 SM00028 Tetratricopeptide repeats BF37_5444 SM00260 Two component signalling adaptor domain BF37_5444 SM00448 cheY-homologous receiver domain BF37_5454 SM00382 ATPases associated with a variety of cellular activities BF37_5471 SM00138 Methyltransferase, chemotaxis proteins BF37_5475 SM00260 Two component signalling adaptor domain BF37_5475 SM00387 Histidine kinase-like ATPases BF37_5475 SM01231 BF37_5475 BF37_5476 SM00073 Histidine Phosphotransfer domain BF37_5477 SM00448 cheY-homologous receiver domain BF37_5495 SM00422 helix_turn_helix, mercury resistance BF37_5495 SM00871 Bacterial transcription activator, effector binding domain BF37_5496 SM00849 Metallo-beta-lactamase superfamily BF37_55 SM00091 PAS domain BF37_55 SM00387 Histidine kinase-like ATPases BF37_55 SM00388 His Kinase A (phosphoacceptor) domain BF37_5506 SM00357 Cold shock protein domain BF37_5531 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BF37_5531 SM00475 5'-3' exonuclease BF37_5537 SM00450 Rhodanese Homology Domain BF37_5550 SM00491 BF37_5550 BF37_5552 SM00981 BF37_5552 BF37_5563 SM00060 Fibronectin type 3 domain BF37_5565 SM00478 endonuclease III BF37_5565 SM00525 BF37_5565 BF37_557 SM00422 helix_turn_helix, mercury resistance BF37_5570 SM00479 BF37_5570 BF37_5570 SM00487 DEAD-like helicases superfamily BF37_5570 SM00491 BF37_5570 BF37_5579 SM00851 MGS-like domain BF37_5583 SM00986 Uracil DNA glycosylase superfamily BF37_5583 SM00987 UreE urease accessory protein, C-terminal domain BF37_5592 SM00914 BF37_5592 BF37_5593 SM00028 Tetratricopeptide repeats BF37_5597 SM00562 BF37_5597 BF37_5601 SM00758 BF37_5601 BF37_5602 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF37_5621 SM00860 SMI1 / KNR4 family BF37_563 SM00448 cheY-homologous receiver domain BF37_5630 SM00954 Region found in RelA / SpoT proteins BF37_5636 SM00028 Tetratricopeptide repeats BF37_5639 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF37_564 SM00091 PAS domain BF37_564 SM00387 Histidine kinase-like ATPases BF37_5643 SM00318 Staphylococcal nuclease homologues BF37_5645 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BF37_5645 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BF37_5645 SM00493 BF37_5645 BF37_5659 SM00507 HNH nucleases BF37_566 SM00860 SMI1 / KNR4 family BF37_5660 SM00487 DEAD-like helicases superfamily BF37_567 SM00860 SMI1 / KNR4 family BF37_5679 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BF37_5703 SM00530 Helix-turn-helix XRE-family like proteins BF37_5706 SM00843 BF37_5706 BF37_5709 SM00864 Tubulin/FtsZ family, GTPase domain BF37_571 SM00382 ATPases associated with a variety of cellular activities BF37_5757 SM00725 NEAr Transporter domain BF37_5762 SM00014 Acid phosphatase homologues BF37_5768 SM00984 UDP binding domain BF37_5793 SM00857 Resolvase, N terminal domain BF37_5823 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BF37_5824 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BF37_5824 SM00493 BF37_5824 BF37_585 SM00646 BF37_585 BF37_5875 SM00646 BF37_5875 BF37_5888 SM00014 Acid phosphatase homologues BF37_5895 SM00854 Bacterial capsule synthesis protein PGA_cap BF37_5899 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF37_596 SM00635 Bacterial Ig-like domain 2 BF37_599 SM00957 SecA DEAD-like domain BF37_599 SM00958 SecA preprotein cross-linking domain BF37_606 SM00729 Elongator protein 3, MiaB family, Radical SAM BF37_623 SM00382 ATPases associated with a variety of cellular activities BF37_625 SM00062 Bacterial periplasmic substrate-binding proteins BF37_625 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BF37_626 SM00382 ATPases associated with a variety of cellular activities BF37_628 SM00382 ATPases associated with a variety of cellular activities BF37_634 SM01060 BF37_634 BF37_647 SM00344 helix_turn_helix ASNC type BF37_667 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen BF37_678 SM00382 ATPases associated with a variety of cellular activities BF37_680 SM00287 Bacterial SH3 domain homologues BF37_690 SM00829 Enoylreductase BF37_695 SM00450 Rhodanese Homology Domain BF37_699 SM00450 Rhodanese Homology Domain BF37_699 SM00849 Metallo-beta-lactamase superfamily BF37_700 SM00450 Rhodanese Homology Domain BF37_702 SM00450 Rhodanese Homology Domain BF37_705 SM00347 helix_turn_helix multiple antibiotic resistance protein BF37_719 SM00354 helix_turn _helix lactose operon repressor BF37_721 SM00640 Glycosyl hydrolases family 32 BF37_73 SM00421 helix_turn_helix, Lux Regulon BF37_73 SM00448 cheY-homologous receiver domain BF37_730 SM00347 helix_turn_helix multiple antibiotic resistance protein BF37_74 SM00387 Histidine kinase-like ATPases BF37_747 SM00382 ATPases associated with a variety of cellular activities BF37_749 SM00287 Bacterial SH3 domain homologues BF37_752 SM00116 Domain in cystathionine beta-synthase and other proteins. BF37_782 SM00899 BF37_782 BF37_800 SM00530 Helix-turn-helix XRE-family like proteins BF37_809 SM00530 Helix-turn-helix XRE-family like proteins BF37_811 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BF37_818 SM00770 Zinc dependent phospholipase C (alpha toxin) BF37_820 SM00829 Enoylreductase BF37_827 SM00382 ATPases associated with a variety of cellular activities BF37_830 SM00354 helix_turn _helix lactose operon repressor BF37_833 SM00347 helix_turn_helix multiple antibiotic resistance protein BF37_835 SM00382 ATPases associated with a variety of cellular activities BF37_836 SM00382 ATPases associated with a variety of cellular activities BF37_844 SM00448 cheY-homologous receiver domain BF37_844 SM00862 Transcriptional regulatory protein, C terminal BF37_845 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF37_845 SM00387 Histidine kinase-like ATPases BF37_845 SM00388 His Kinase A (phosphoacceptor) domain BF37_855 SM00062 Bacterial periplasmic substrate-binding proteins BF37_855 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BF37_856 SM00382 ATPases associated with a variety of cellular activities BF37_863 SM00642 Alpha-amylase domain BF37_865 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF37_865 SM00866 BF37_865 BF37_867 SM00052 Putative diguanylate phosphodiesterase BF37_867 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BF37_867 SM00091 PAS domain BF37_867 SM00267 diguanylate cyclase BF37_870 SM00155 Phospholipase D. Active site motifs. BF37_871 SM00382 ATPases associated with a variety of cellular activities BF37_872 SM00327 von Willebrand factor (vWF) type A domain BF37_877 SM00382 ATPases associated with a variety of cellular activities BF37_883 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF37_896 SM00028 Tetratricopeptide repeats BF37_896 SM00530 Helix-turn-helix XRE-family like proteins BF37_899 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF37_901 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BF37_901 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BF37_905 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BF37_905 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BF37_909 SM00448 cheY-homologous receiver domain BF37_909 SM00862 Transcriptional regulatory protein, C terminal BF37_910 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF37_910 SM00387 Histidine kinase-like ATPases BF37_910 SM00388 His Kinase A (phosphoacceptor) domain BF37_912 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF37_915 SM00919 Malic enzyme, NAD binding domain BF37_915 SM01274 BF37_915 BF37_917 SM00448 cheY-homologous receiver domain BF37_918 SM00387 Histidine kinase-like ATPases BF37_919 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BF37_919 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF37_922 SM00387 Histidine kinase-like ATPases BF37_922 SM00388 His Kinase A (phosphoacceptor) domain BF37_923 SM00448 cheY-homologous receiver domain BF37_923 SM00862 Transcriptional regulatory protein, C terminal BF37_928 SM00382 ATPases associated with a variety of cellular activities BF37_930 SM00248 ankyrin repeats BF37_934 SM00448 cheY-homologous receiver domain BF37_935 SM00091 PAS domain BF37_935 SM00387 Histidine kinase-like ATPases BF37_936 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BF37_936 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF37_937 SM00244 prohibitin homologues BF37_939 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BF37_942 SM00364 Leucine-rich repeats, bacterial type BF37_942 SM00365 Leucine-rich repeat, SDS22-like subfamily BF37_942 SM00369 Leucine-rich repeats, typical (most populated) subfamily BF37_942 SM00725 NEAr Transporter domain BF37_944 SM00763 PrkA AAA domain BF37_946 SM00052 Putative diguanylate phosphodiesterase BF37_946 SM00091 PAS domain BF37_946 SM00267 diguanylate cyclase BF37_949 SM00567 E-Z type HEAT repeats BF37_982 SM00382 ATPases associated with a variety of cellular activities BF37_986 SM00382 ATPases associated with a variety of cellular activities BF37_991 SM00478 endonuclease III BF37_991 SM00525 BF37_991