locus-tag class description DNQ11_00005 PF00308 Bacterial dnaA protein DNQ11_00005 PF08299 Bacterial dnaA protein helix-turn-helix DNQ11_00005 PF11638 DnaA N-terminal domain DNQ11_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain DNQ11_00010 PF02767 DNA polymerase III beta subunit, central domain DNQ11_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain DNQ11_00020 PF02463 RecF/RecN/SMC N terminal domain DNQ11_00025 PF00986 DNA gyrase B subunit, carboxyl terminus DNQ11_00025 PF00204 DNA gyrase B DNQ11_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_00025 PF01751 Toprim domain DNQ11_00030 PF00521 DNA gyrase/topoisomerase IV, subunit A DNQ11_00030 PF03989 DNA gyrase C-terminal domain, beta-propeller DNQ11_00060 PF14175 YaaC-like Protein DNQ11_00065 PF00571 CBS domain DNQ11_00065 PF00478 IMP dehydrogenase / GMP reductase domain DNQ11_00070 PF00768 D-alanyl-D-alanine carboxypeptidase DNQ11_00070 PF07943 Penicillin-binding protein 5, C-terminal domain DNQ11_00075 PF01680 SOR/SNZ family DNQ11_00080 PF01174 SNO glutamine amidotransferase family DNQ11_00085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DNQ11_00085 PF02403 Seryl-tRNA synthetase N-terminal domain DNQ11_00100 PF01712 Deoxynucleoside kinase DNQ11_00105 PF01712 Deoxynucleoside kinase DNQ11_00110 PF00857 Isochorismatase family DNQ11_00120 PF14437 MafB19-like deaminase DNQ11_00130 PF12169 DNA polymerase III subunits gamma and tau domain III DNQ11_00135 PF02575 YbaB/EbfC DNA-binding family DNQ11_00140 PF13662 Toprim domain DNQ11_00140 PF02132 RecR protein DNQ11_00145 PF10704 Protein of unknown function (DUF2508) DNQ11_00150 PF07441 SigmaK-factor processing regulatory protein BofA DNQ11_00185 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DNQ11_00185 PF01276 Orn/Lys/Arg decarboxylase, major domain DNQ11_00190 PF02223 Thymidylate kinase DNQ11_00195 PF09115 DNA polymerase III, delta subunit, C terminal DNQ11_00200 PF04468 PSP1 C-terminal conserved region DNQ11_00205 PF06156 Initiation control protein YabA DNQ11_00210 PF05175 Methyltransferase small domain DNQ11_00215 PF01541 GIY-YIG catalytic domain DNQ11_00220 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DNQ11_00225 PF18277 AbrB C-terminal domain DNQ11_00225 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DNQ11_00230 PF01588 Putative tRNA binding domain DNQ11_00230 PF09334 tRNA synthetases class I (M) DNQ11_00230 PF08264 Anticodon-binding domain of tRNA DNQ11_00235 PF01026 TatD related DNase DNQ11_00240 PF13331 Domain of unknown function (DUF4093) DNQ11_00240 PF13662 Toprim domain DNQ11_00245 PF00398 Ribosomal RNA adenine dimethylase DNQ11_00250 PF05582 YabG peptidase U57 DNQ11_00255 PF06257 Biofilm formation stimulator VEG DNQ11_00260 PF00269 Small, acid-soluble spore proteins, alpha/beta type DNQ11_00265 PF00288 GHMP kinases N terminal domain DNQ11_00265 PF08544 GHMP kinases C terminal DNQ11_00270 PF09182 Bacterial purine repressor, N-terminal DNQ11_00270 PF00156 Phosphoribosyl transferase domain DNQ11_00280 PF01042 Endoribonuclease L-PSP DNQ11_00285 PF04026 SpoVG DNQ11_00290 PF00132 Bacterial transferase hexapeptide (six repeats) DNQ11_00290 PF00483 Nucleotidyl transferase DNQ11_00295 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DNQ11_00295 PF14572 Phosphoribosyl synthetase-associated domain DNQ11_00300 PF01195 Peptidyl-tRNA hydrolase DNQ11_00310 PF03461 TRCF domain DNQ11_00310 PF17757 UvrB interaction domain DNQ11_00310 PF00271 Helicase conserved C-terminal domain DNQ11_00310 PF00270 DEAD/DEAH box helicase DNQ11_00310 PF02559 CarD-like/TRCF domain DNQ11_00315 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DNQ11_00315 PF15714 Stage V sporulation protein T C-terminal, transcription factor DNQ11_00320 PF01943 Polysaccharide biosynthesis protein DNQ11_00320 PF14667 Polysaccharide biosynthesis C-terminal domain DNQ11_00325 PF03819 MazG nucleotide pyrophosphohydrolase domain DNQ11_00325 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DNQ11_00330 PF01479 S4 domain DNQ11_00335 PF07873 YabP family DNQ11_00340 PF09578 Spore cortex protein YabQ (Spore_YabQ) DNQ11_00350 PF00575 S1 RNA binding domain DNQ11_00365 PF07228 Stage II sporulation protein E (SpoIIE) DNQ11_00370 PF09179 TilS substrate binding domain DNQ11_00370 PF11734 TilS substrate C-terminal domain DNQ11_00370 PF01171 PP-loop family DNQ11_00380 PF01434 Peptidase family M41 DNQ11_00380 PF00004 ATPase family associated with various cellular activities (AAA) DNQ11_00380 PF17862 AAA+ lid domain DNQ11_00380 PF06480 FtsH Extracellular DNQ11_00385 PF03309 Type III pantothenate kinase DNQ11_00390 PF01430 Hsp33 protein DNQ11_00395 PF00291 Pyridoxal-phosphate dependent enzyme DNQ11_00400 PF00425 chorismate binding enzyme DNQ11_00400 PF04715 Anthranilate synthase component I, N terminal region DNQ11_00405 PF00117 Glutamine amidotransferase class-I DNQ11_00410 PF01063 Amino-transferase class IV DNQ11_00415 PF00809 Pterin binding enzyme DNQ11_00420 PF02152 Dihydroneopterin aldolase DNQ11_00425 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DNQ11_00430 PF01381 Helix-turn-helix DNQ11_00435 PF01207 Dihydrouridine synthase (Dus) DNQ11_00440 PF01336 OB-fold nucleic acid binding domain DNQ11_00440 PF00152 tRNA synthetases class II (D, K and N) DNQ11_00460 PF17727 CtsR C-terminal dimerization domain DNQ11_00460 PF05848 CtsR N-terminal HTH domain DNQ11_00465 PF02151 UvrB/uvrC motif DNQ11_00470 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain DNQ11_00475 PF10431 C-terminal, D2-small domain, of ClpB protein DNQ11_00475 PF02861 Clp amino terminal domain, pathogenicity island component DNQ11_00475 PF17871 AAA lid domain DNQ11_00475 PF07724 AAA domain (Cdc48 subfamily) DNQ11_00475 PF00004 ATPase family associated with various cellular activities (AAA) DNQ11_00480 PF18073 Rubredoxin metal binding domain DNQ11_00485 PF02457 DisA bacterial checkpoint controller nucleotide-binding DNQ11_00485 PF10635 DisA bacterial checkpoint controller linker region DNQ11_00495 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DNQ11_00500 PF02542 YgbB family DNQ11_00505 PF00749 tRNA synthetases class I (E and Q), catalytic domain DNQ11_00510 PF00132 Bacterial transferase hexapeptide (six repeats) DNQ11_00510 PF06426 Serine acetyltransferase, N-terminal DNQ11_00515 PF01406 tRNA synthetases class I (C) catalytic domain DNQ11_00515 PF09190 DALR domain DNQ11_00520 PF00636 Ribonuclease III domain DNQ11_00525 PF08032 RNA 2'-O ribose methyltransferase substrate binding DNQ11_00525 PF00588 SpoU rRNA Methylase family DNQ11_00530 PF05991 YacP-like NYN domain DNQ11_00535 PF04542 Sigma-70 region 2 DNQ11_00535 PF08281 Sigma-70, region 4 DNQ11_00540 PF00471 Ribosomal protein L33 DNQ11_00545 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DNQ11_00550 PF00467 KOW motif DNQ11_00550 PF02357 Transcription termination factor nusG DNQ11_00555 PF00298 Ribosomal protein L11, RNA binding domain DNQ11_00555 PF03946 Ribosomal protein L11, N-terminal domain DNQ11_00560 PF00687 Ribosomal protein L1p/L10e family DNQ11_00565 PF00466 Ribosomal protein L10 DNQ11_00570 PF16320 Ribosomal protein L7/L12 dimerisation domain DNQ11_00570 PF00542 Ribosomal protein L7/L12 C-terminal domain DNQ11_00575 PF05175 Methyltransferase small domain DNQ11_00580 PF04565 RNA polymerase Rpb2, domain 3 DNQ11_00580 PF10385 RNA polymerase beta subunit external 1 domain DNQ11_00580 PF00562 RNA polymerase Rpb2, domain 6 DNQ11_00580 PF04563 RNA polymerase beta subunit DNQ11_00580 PF04560 RNA polymerase Rpb2, domain 7 DNQ11_00580 PF04561 RNA polymerase Rpb2, domain 2 DNQ11_00585 PF05000 RNA polymerase Rpb1, domain 4 DNQ11_00585 PF04997 RNA polymerase Rpb1, domain 1 DNQ11_00585 PF04998 RNA polymerase Rpb1, domain 5 DNQ11_00585 PF00623 RNA polymerase Rpb1, domain 2 DNQ11_00585 PF04983 RNA polymerase Rpb1, domain 3 DNQ11_00590 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family DNQ11_00595 PF00164 Ribosomal protein S12/S23 DNQ11_00600 PF00177 Ribosomal protein S7p/S5e DNQ11_00605 PF00679 Elongation factor G C-terminus DNQ11_00605 PF03144 Elongation factor Tu domain 2 DNQ11_00605 PF03764 Elongation factor G, domain IV DNQ11_00605 PF14492 Elongation Factor G, domain II DNQ11_00605 PF00009 Elongation factor Tu GTP binding domain DNQ11_00610 PF03143 Elongation factor Tu C-terminal domain DNQ11_00610 PF03144 Elongation factor Tu domain 2 DNQ11_00610 PF00009 Elongation factor Tu GTP binding domain DNQ11_00615 PF00338 Ribosomal protein S10p/S20e DNQ11_00620 PF00297 Ribosomal protein L3 DNQ11_00625 PF00573 Ribosomal protein L4/L1 family DNQ11_00630 PF00276 Ribosomal protein L23 DNQ11_00635 PF00181 Ribosomal Proteins L2, RNA binding domain DNQ11_00635 PF03947 Ribosomal Proteins L2, C-terminal domain DNQ11_00640 PF00203 Ribosomal protein S19 DNQ11_00645 PF00237 Ribosomal protein L22p/L17e DNQ11_00650 PF00189 Ribosomal protein S3, C-terminal domain DNQ11_00650 PF07650 KH domain DNQ11_00655 PF00252 Ribosomal protein L16p/L10e DNQ11_00660 PF00831 Ribosomal L29 protein DNQ11_00665 PF00366 Ribosomal protein S17 DNQ11_00670 PF00238 Ribosomal protein L14p/L23e DNQ11_00675 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DNQ11_00675 PF00467 KOW motif DNQ11_00680 PF00673 ribosomal L5P family C-terminus DNQ11_00680 PF00281 Ribosomal protein L5 DNQ11_00685 PF00253 Ribosomal protein S14p/S29e DNQ11_00690 PF00410 Ribosomal protein S8 DNQ11_00695 PF00347 Ribosomal protein L6 DNQ11_00700 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DNQ11_00705 PF00333 Ribosomal protein S5, N-terminal domain DNQ11_00705 PF03719 Ribosomal protein S5, C-terminal domain DNQ11_00710 PF00327 Ribosomal protein L30p/L7e DNQ11_00715 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DNQ11_00720 PF00344 SecY translocase DNQ11_00725 PF05191 Adenylate kinase, active site lid DNQ11_00730 PF00557 Metallopeptidase family M24 DNQ11_00735 PF01176 Translation initiation factor 1A / IF-1 DNQ11_00740 PF00444 Ribosomal protein L36 DNQ11_00745 PF00416 Ribosomal protein S13/S18 DNQ11_00750 PF00411 Ribosomal protein S11 DNQ11_00755 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DNQ11_00755 PF01000 RNA polymerase Rpb3/RpoA insert domain DNQ11_00755 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DNQ11_00760 PF01196 Ribosomal protein L17 DNQ11_00765 PF00005 ABC transporter DNQ11_00770 PF00005 ABC transporter DNQ11_00775 PF02361 Cobalt transport protein DNQ11_00780 PF01416 tRNA pseudouridine synthase DNQ11_00785 PF00572 Ribosomal protein L13 DNQ11_00790 PF00380 Ribosomal protein S9/S16 DNQ11_00800 PF01520 N-acetylmuramoyl-L-alanine amidase DNQ11_00805 PF10609 NUBPL iron-transfer P-loop NTPase DNQ11_00810 PF17898 Spore germination GerD central core domain DNQ11_00815 PF14089 KinB-signalling pathway activation in sporulation DNQ11_00820 PF01522 Polysaccharide deacetylase DNQ11_00900 PF00491 Arginase family DNQ11_00905 PF02457 DisA bacterial checkpoint controller nucleotide-binding DNQ11_00910 PF07949 YbbR-like protein DNQ11_00915 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DNQ11_00915 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DNQ11_00915 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DNQ11_00915 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DNQ11_00925 PF01380 SIS domain DNQ11_00930 PF00561 alpha/beta hydrolase fold DNQ11_00935 PF00392 Bacterial regulatory proteins, gntR family DNQ11_00935 PF07729 FCD domain DNQ11_00945 PF02447 GntP family permease DNQ11_00950 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DNQ11_00950 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DNQ11_00960 PF00326 Prolyl oligopeptidase family DNQ11_00960 PF07676 WD40-like Beta Propeller Repeat DNQ11_00995 PF00528 Binding-protein-dependent transport system inner membrane component DNQ11_01000 PF09383 NIL domain DNQ11_01000 PF00005 ABC transporter DNQ11_01005 PF03180 NLPA lipoprotein DNQ11_01020 PF01565 FAD binding domain DNQ11_01025 PF07690 Major Facilitator Superfamily DNQ11_01035 PF07690 Major Facilitator Superfamily DNQ11_01050 PF00528 Binding-protein-dependent transport system inner membrane component DNQ11_01055 PF12911 N-terminal TM domain of oligopeptide transport permease C DNQ11_01055 PF00528 Binding-protein-dependent transport system inner membrane component DNQ11_01060 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DNQ11_01060 PF00005 ABC transporter DNQ11_01065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DNQ11_01065 PF00005 ABC transporter DNQ11_01070 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DNQ11_01080 PF12833 Helix-turn-helix domain DNQ11_01095 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DNQ11_01100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DNQ11_01105 PF00248 Aldo/keto reductase family DNQ11_01110 PF14748 Pyrroline-5-carboxylate reductase dimerisation DNQ11_01110 PF03807 NADP oxidoreductase coenzyme F420-dependent DNQ11_01120 PF04973 Nicotinamide mononucleotide transporter DNQ11_01125 PF06800 Sugar transport protein DNQ11_01130 PF00528 Binding-protein-dependent transport system inner membrane component DNQ11_01140 PF12728 Helix-turn-helix domain DNQ11_01140 PF12727 PBP superfamily domain DNQ11_01155 PF03466 LysR substrate binding domain DNQ11_01155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNQ11_01160 PF00892 EamA-like transporter family DNQ11_01165 PF14142 YrzO-like protein DNQ11_01175 PF01553 Acyltransferase DNQ11_01190 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DNQ11_01190 PF00356 Bacterial regulatory proteins, lacI family DNQ11_01200 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DNQ11_01200 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DNQ11_01215 PF01026 TatD related DNase DNQ11_01220 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) DNQ11_01245 PF16326 ABC transporter C-terminal domain DNQ11_01245 PF00005 ABC transporter DNQ11_01245 PF12848 ABC transporter DNQ11_01260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DNQ11_01265 PF00528 Binding-protein-dependent transport system inner membrane component DNQ11_01275 PF00005 ABC transporter DNQ11_01275 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DNQ11_01280 PF00005 ABC transporter DNQ11_01280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DNQ11_01320 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DNQ11_01325 PF01557 Fumarylacetoacetate (FAA) hydrolase family DNQ11_01340 PF07690 Major Facilitator Superfamily DNQ11_01350 PF01225 Mur ligase family, catalytic domain DNQ11_01350 PF08245 Mur ligase middle domain DNQ11_01350 PF02875 Mur ligase family, glutamate ligase domain DNQ11_01355 PF00270 DEAD/DEAH box helicase DNQ11_01355 PF00271 Helicase conserved C-terminal domain DNQ11_01360 PF03851 UV-endonuclease UvdE DNQ11_01365 PF01694 Rhomboid family DNQ11_01370 PF01648 4'-phosphopantetheinyl transferase superfamily DNQ11_01380 PF01168 Alanine racemase, N-terminal domain DNQ11_01380 PF00842 Alanine racemase, C-terminal domain DNQ11_01385 PF01402 Ribbon-helix-helix protein, copG family DNQ11_01390 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system DNQ11_01395 PF17674 HHH domain DNQ11_01395 PF16921 Tex protein YqgF-like domain DNQ11_01395 PF00575 S1 RNA binding domain DNQ11_01395 PF09371 Tex-like protein N-terminal domain DNQ11_01405 PF17283 SprT-like zinc ribbon domain DNQ11_01405 PF10263 SprT-like family DNQ11_01490 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DNQ11_01495 PF00814 Glycoprotease family DNQ11_01500 PF00583 Acetyltransferase (GNAT) family DNQ11_01505 PF00814 Glycoprotease family DNQ11_01510 PF00005 ABC transporter DNQ11_01510 PF16326 ABC transporter C-terminal domain DNQ11_01510 PF12848 ABC transporter DNQ11_01515 PF06971 Putative DNA-binding protein N-terminus DNQ11_01515 PF02629 CoA binding domain DNQ11_01525 PF02517 CPBP intramembrane metalloprotease DNQ11_01530 PF00166 Chaperonin 10 Kd subunit DNQ11_01535 PF00118 TCP-1/cpn60 chaperonin family DNQ11_01540 PF00117 Glutamine amidotransferase class-I DNQ11_01540 PF02540 NAD synthase DNQ11_01540 PF00958 GMP synthase C terminal domain DNQ11_01545 PF00860 Permease family DNQ11_01550 PF00072 Response regulator receiver domain DNQ11_01550 PF00486 Transcriptional regulatory protein, C terminal DNQ11_01555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_01555 PF00512 His Kinase A (phospho-acceptor) domain DNQ11_01555 PF00989 PAS fold DNQ11_01555 PF16736 Single Cache-like DNQ11_01580 PF05045 Rhamnan synthesis protein F DNQ11_01580 PF14307 Glycosyltransferase WbsX DNQ11_01590 PF08241 Methyltransferase domain DNQ11_01635 PF02673 Bacitracin resistance protein BacA DNQ11_01645 PF00005 ABC transporter DNQ11_01650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_01650 PF00512 His Kinase A (phospho-acceptor) domain DNQ11_01655 PF00072 Response regulator receiver domain DNQ11_01655 PF00486 Transcriptional regulatory protein, C terminal DNQ11_01680 PF00731 AIR carboxylase DNQ11_01685 PF02222 ATP-grasp domain DNQ11_01685 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DNQ11_01690 PF10397 Adenylosuccinate lyase C-terminus DNQ11_01690 PF00206 Lyase DNQ11_01695 PF01259 SAICAR synthetase DNQ11_01700 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase DNQ11_01710 PF02769 AIR synthase related protein, C-terminal domain DNQ11_01710 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DNQ11_01710 PF00586 AIR synthase related protein, N-terminal domain DNQ11_01715 PF00156 Phosphoribosyl transferase domain DNQ11_01720 PF02769 AIR synthase related protein, C-terminal domain DNQ11_01720 PF00586 AIR synthase related protein, N-terminal domain DNQ11_01725 PF00551 Formyl transferase DNQ11_01730 PF02142 MGS-like domain DNQ11_01730 PF01808 AICARFT/IMPCHase bienzyme DNQ11_01735 PF02843 Phosphoribosylglycinamide synthetase, C domain DNQ11_01735 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DNQ11_01735 PF02844 Phosphoribosylglycinamide synthetase, N domain DNQ11_01760 PF01884 PcrB family DNQ11_01765 PF13361 UvrD-like helicase C-terminal domain DNQ11_01765 PF00580 UvrD/REP helicase N-terminal domain DNQ11_01770 PF00533 BRCA1 C Terminus (BRCT) domain DNQ11_01770 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DNQ11_01770 PF03120 NAD-dependent DNA ligase OB-fold domain DNQ11_01770 PF01653 NAD-dependent DNA ligase adenylation domain DNQ11_01770 PF12826 Helix-hairpin-helix motif DNQ11_01775 PF07537 CamS sex pheromone cAM373 precursor DNQ11_01780 PF01925 Sulfite exporter TauE/SafE DNQ11_01785 PF00171 Aldehyde dehydrogenase family DNQ11_01795 PF00857 Isochorismatase family DNQ11_01805 PF00005 ABC transporter DNQ11_01805 PF09383 NIL domain DNQ11_01810 PF00528 Binding-protein-dependent transport system inner membrane component DNQ11_01815 PF03180 NLPA lipoprotein DNQ11_01835 PF01047 MarR family DNQ11_01845 PF02686 Glu-tRNAGln amidotransferase C subunit DNQ11_01850 PF01425 Amidase DNQ11_01855 PF02637 GatB domain DNQ11_01855 PF02934 GatB/GatE catalytic domain DNQ11_01860 PF00781 Diacylglycerol kinase catalytic domain DNQ11_01865 PF13419 Haloacid dehalogenase-like hydrolase DNQ11_01870 PF00202 Aminotransferase class-III DNQ11_01875 PF00158 Sigma-54 interaction domain DNQ11_01880 PF00171 Aldehyde dehydrogenase family DNQ11_01885 PF00893 Small Multidrug Resistance protein DNQ11_01890 PF02073 Thermophilic metalloprotease (M29) DNQ11_01905 PF07670 Nucleoside recognition DNQ11_01905 PF07662 Na+ dependent nucleoside transporter C-terminus DNQ11_01905 PF01773 Na+ dependent nucleoside transporter N-terminus DNQ11_01910 PF05958 tRNA (Uracil-5-)-methyltransferase DNQ11_01910 PF01938 TRAM domain DNQ11_01910 PF02475 Met-10+ like-protein DNQ11_01915 PF01207 Dihydrouridine synthase (Dus) DNQ11_01925 PF07308 Protein of unknown function (DUF1456) DNQ11_01940 PF13378 Enolase C-terminal domain-like DNQ11_01940 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DNQ11_01955 PF01546 Peptidase family M20/M25/M40 DNQ11_01955 PF07687 Peptidase dimerisation domain DNQ11_01965 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNQ11_01965 PF13192 Thioredoxin domain DNQ11_01970 PF00578 AhpC/TSA family DNQ11_01975 PF01636 Phosphotransferase enzyme family DNQ11_01985 PF00596 Class II Aldolase and Adducin N-terminal domain DNQ11_01990 PF01032 FecCD transport family DNQ11_01995 PF01032 FecCD transport family DNQ11_02000 PF01497 Periplasmic binding protein DNQ11_02010 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNQ11_02025 PF12728 Helix-turn-helix domain DNQ11_02070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_02070 PF00512 His Kinase A (phospho-acceptor) domain DNQ11_02070 PF13188 PAS domain DNQ11_02070 PF00989 PAS fold DNQ11_02070 PF13426 PAS domain DNQ11_02090 PF10127 RNA repair pathway DNA polymerase beta family DNQ11_02095 PF07690 Major Facilitator Superfamily DNQ11_02100 PF00355 Rieske [2Fe-2S] domain DNQ11_02100 PF01266 FAD dependent oxidoreductase DNQ11_02110 PF00528 Binding-protein-dependent transport system inner membrane component DNQ11_02115 PF00497 Bacterial extracellular solute-binding proteins, family 3 DNQ11_02120 PF00005 ABC transporter DNQ11_02130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DNQ11_02130 PF12729 Four helix bundle sensory module for signal transduction DNQ11_02130 PF00672 HAMP domain DNQ11_02135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DNQ11_02135 PF00672 HAMP domain DNQ11_02135 PF12729 Four helix bundle sensory module for signal transduction DNQ11_02140 PF00128 Alpha amylase, catalytic domain DNQ11_02140 PF16657 Maltogenic Amylase, C-terminal domain DNQ11_02145 PF02378 Phosphotransferase system, EIIC DNQ11_02145 PF00367 phosphotransferase system, EIIB DNQ11_02145 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DNQ11_02150 PF03372 Endonuclease/Exonuclease/phosphatase family DNQ11_02155 PF01061 ABC-2 type transporter DNQ11_02160 PF01131 DNA topoisomerase DNQ11_02160 PF01751 Toprim domain DNQ11_02165 PF02110 Hydroxyethylthiazole kinase family DNQ11_02170 PF02581 Thiamine monophosphate synthase DNQ11_02175 PF03605 Anaerobic c4-dicarboxylate membrane transporter DNQ11_02180 PF00672 HAMP domain DNQ11_02180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DNQ11_02185 PF01910 Thiamine-binding protein DNQ11_02190 PF00528 Binding-protein-dependent transport system inner membrane component DNQ11_02200 PF00005 ABC transporter DNQ11_02205 PF12848 ABC transporter DNQ11_02205 PF00005 ABC transporter DNQ11_02210 PF00041 Fibronectin type III domain DNQ11_02210 PF00704 Glycosyl hydrolases family 18 DNQ11_02230 PF08360 QacR-like protein, C-terminal region DNQ11_02230 PF00440 Bacterial regulatory proteins, tetR family DNQ11_02250 PF11700 Vacuole effluxer Atg22 like DNQ11_02265 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DNQ11_02265 PF09180 Prolyl-tRNA synthetase, C-terminal DNQ11_02265 PF03129 Anticodon binding domain DNQ11_02275 PF00480 ROK family DNQ11_02280 PF02342 TerD domain DNQ11_02285 PF02342 TerD domain DNQ11_02290 PF02342 TerD domain DNQ11_02295 PF03741 Integral membrane protein TerC family DNQ11_02300 PF14266 Putative component of 'biosynthetic module' DNQ11_02305 PF05816 Toxic anion resistance protein (TelA) DNQ11_02310 PF00689 Cation transporting ATPase, C-terminus DNQ11_02310 PF00690 Cation transporter/ATPase, N-terminus DNQ11_02315 PF06569 Protein of unknown function (DUF1128) DNQ11_02320 PF01451 Low molecular weight phosphotyrosine protein phosphatase DNQ11_02330 PF03631 Virulence factor BrkB DNQ11_02345 PF00892 EamA-like transporter family DNQ11_02365 PF09335 SNARE associated Golgi protein DNQ11_02380 PF16242 Pyridoxamine 5'-phosphate oxidase like DNQ11_02385 PF01699 Sodium/calcium exchanger protein DNQ11_02390 PF14167 YfkD-like protein DNQ11_02395 PF08756 YfkB-like domain DNQ11_02395 PF04055 Radical SAM superfamily DNQ11_02405 PF05681 Fumarate hydratase (Fumerase) DNQ11_02405 PF05683 Fumarase C-terminus DNQ11_02410 PF01522 Polysaccharide deacetylase DNQ11_02420 PF00730 HhH-GPD superfamily base excision DNA repair protein DNQ11_02425 PF05958 tRNA (Uracil-5-)-methyltransferase DNQ11_02425 PF01938 TRAM domain DNQ11_02430 PF14659 Phage integrase, N-terminal SAM-like domain DNQ11_02430 PF00589 Phage integrase family DNQ11_02435 PF01381 Helix-turn-helix DNQ11_02455 PF01381 Helix-turn-helix DNQ11_02490 PF07319 Primosomal protein DnaI N-terminus DNQ11_02490 PF01695 IstB-like ATP binding protein DNQ11_02595 PF00589 Phage integrase family DNQ11_02600 PF00589 Phage integrase family DNQ11_02745 PF01416 tRNA pseudouridine synthase DNQ11_02755 PF13426 PAS domain DNQ11_02755 PF00158 Sigma-54 interaction domain DNQ11_02755 PF02954 Bacterial regulatory protein, Fis family DNQ11_02765 PF00324 Amino acid permease DNQ11_02770 PF07687 Peptidase dimerisation domain DNQ11_02770 PF01546 Peptidase family M20/M25/M40 DNQ11_02800 PF04960 Glutaminase DNQ11_02810 PF00367 phosphotransferase system, EIIB DNQ11_02810 PF02378 Phosphotransferase system, EIIC DNQ11_02815 PF00144 Beta-lactamase DNQ11_02830 PF00535 Glycosyl transferase family 2 DNQ11_02835 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DNQ11_02835 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DNQ11_02835 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DNQ11_02840 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DNQ11_02840 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DNQ11_02840 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DNQ11_02845 PF00551 Formyl transferase DNQ11_02845 PF01370 NAD dependent epimerase/dehydratase family DNQ11_02845 PF02911 Formyl transferase, C-terminal domain DNQ11_02850 PF00535 Glycosyl transferase family 2 DNQ11_02860 PF01228 Glycine radical DNQ11_02860 PF02901 Pyruvate formate lyase-like DNQ11_02865 PF04055 Radical SAM superfamily DNQ11_02870 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase DNQ11_02870 PF04101 Glycosyltransferase family 28 C-terminal domain DNQ11_02885 PF01979 Amidohydrolase family DNQ11_02890 PF08338 Domain of unknown function (DUF1731) DNQ11_02890 PF01370 NAD dependent epimerase/dehydratase family DNQ11_02895 PF02631 RecX family DNQ11_02910 PF08176 Small acid-soluble spore protein K family DNQ11_02915 PF14043 WVELL protein DNQ11_02920 PF04307 LexA-binding, inner membrane-associated putative hydrolase DNQ11_02925 PF14815 NUDIX domain DNQ11_02925 PF00730 HhH-GPD superfamily base excision DNA repair protein DNQ11_02935 PF04259 Small, acid-soluble spore protein, gamma-type DNQ11_02940 PF14182 YgaB-like protein DNQ11_02945 PF04167 Protein of unknown function (DUF402) DNQ11_02950 PF00664 ABC transporter transmembrane region DNQ11_02950 PF00005 ABC transporter DNQ11_02955 PF06081 Aromatic acid exporter family member 1 DNQ11_02960 PF04898 Glutamate synthase central domain DNQ11_02960 PF01645 Conserved region in glutamate synthase DNQ11_02960 PF01493 GXGXG motif DNQ11_02960 PF00310 Glutamine amidotransferases class-II DNQ11_02965 PF00202 Aminotransferase class-III DNQ11_02970 PF00005 ABC transporter DNQ11_02985 PF07885 Ion channel DNQ11_02990 PF00578 AhpC/TSA family DNQ11_02995 PF01475 Ferric uptake regulator family DNQ11_03000 PF11023 Zinc-ribbon containing domain DNQ11_03105 PF01709 Transcriptional regulator DNQ11_03110 PF13344 Haloacid dehalogenase-like hydrolase DNQ11_03110 PF00293 NUDIX domain DNQ11_03115 PF00905 Penicillin binding protein transpeptidase domain DNQ11_03115 PF00912 Transglycosylase DNQ11_03120 PF13462 Thioredoxin DNQ11_03130 PF08331 Domain of unknown function (DUF1730) DNQ11_03135 PF12671 Putative amidase domain DNQ11_03140 PF00588 SpoU rRNA Methylase family DNQ11_03145 PF03707 Bacterial signalling protein N terminal repeat DNQ11_03145 PF00990 Diguanylate cyclase, GGDEF domain DNQ11_03145 PF00563 EAL domain DNQ11_03155 PF06798 PrkA serine protein kinase C-terminal domain DNQ11_03155 PF08298 PrkA AAA domain DNQ11_03170 PF04285 Protein of unknown function (DUF444) DNQ11_03185 PF02028 BCCT, betaine/carnitine/choline family transporter DNQ11_03190 PF08453 Peptidase family M9 N-terminal DNQ11_03190 PF01752 Collagenase DNQ11_03190 PF18496 Collagenase G catalytic helper subdomain DNQ11_03200 PF15975 Flotillin DNQ11_03200 PF01145 SPFH domain / Band 7 family DNQ11_03205 PF00672 HAMP domain DNQ11_03205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DNQ11_03205 PF02743 Cache domain DNQ11_03210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_03210 PF00989 PAS fold DNQ11_03210 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DNQ11_03210 PF17203 Single cache domain 3 DNQ11_03215 PF12431 Transcriptional regulator DNQ11_03215 PF00072 Response regulator receiver domain DNQ11_03215 PF08279 HTH domain DNQ11_03220 PF03600 Citrate transporter DNQ11_03245 PF04309 Glycerol-3-phosphate responsive antiterminator DNQ11_03250 PF17912 MalK OB fold domain DNQ11_03250 PF00005 ABC transporter DNQ11_03255 PF00528 Binding-protein-dependent transport system inner membrane component DNQ11_03260 PF00528 Binding-protein-dependent transport system inner membrane component DNQ11_03265 PF13416 Bacterial extracellular solute-binding protein DNQ11_03270 PF00149 Calcineurin-like phosphoesterase DNQ11_03275 PF00072 Response regulator receiver domain DNQ11_03275 PF00486 Transcriptional regulatory protein, C terminal DNQ11_03280 PF00512 His Kinase A (phospho-acceptor) domain DNQ11_03280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_03290 PF13529 Peptidase_C39 like family DNQ11_03295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DNQ11_03295 PF00672 HAMP domain DNQ11_03295 PF02743 Cache domain DNQ11_03300 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DNQ11_03300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_03300 PF17203 Single cache domain 3 DNQ11_03300 PF00989 PAS fold DNQ11_03305 PF00072 Response regulator receiver domain DNQ11_03310 PF03390 2-hydroxycarboxylate transporter family DNQ11_03315 PF03949 Malic enzyme, NAD binding domain DNQ11_03315 PF00390 Malic enzyme, N-terminal domain DNQ11_03325 PF00892 EamA-like transporter family DNQ11_03330 PF00155 Aminotransferase class I and II DNQ11_03330 PF00392 Bacterial regulatory proteins, gntR family DNQ11_03340 PF00672 HAMP domain DNQ11_03340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_03340 PF00989 PAS fold DNQ11_03340 PF00512 His Kinase A (phospho-acceptor) domain DNQ11_03340 PF18698 Histidine kinase sensor domain DNQ11_03345 PF00486 Transcriptional regulatory protein, C terminal DNQ11_03345 PF00072 Response regulator receiver domain DNQ11_03355 PF13508 Acetyltransferase (GNAT) domain DNQ11_03355 PF00583 Acetyltransferase (GNAT) family DNQ11_03360 PF02634 FdhD/NarQ family DNQ11_03365 PF00384 Molybdopterin oxidoreductase DNQ11_03365 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DNQ11_03365 PF00037 4Fe-4S binding domain DNQ11_03365 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DNQ11_03365 PF01568 Molydopterin dinucleotide binding domain DNQ11_03370 PF07849 Protein of unknown function (DUF1641) DNQ11_03380 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DNQ11_03380 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DNQ11_03385 PF13520 Amino acid permease DNQ11_03395 PF01022 Bacterial regulatory protein, arsR family DNQ11_03400 PF00403 Heavy-metal-associated domain DNQ11_03405 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DNQ11_03405 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DNQ11_03405 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain DNQ11_03420 PF02868 Thermolysin metallopeptidase, alpha-helical domain DNQ11_03420 PF01447 Thermolysin metallopeptidase, catalytic domain DNQ11_03420 PF03413 Peptidase propeptide and YPEB domain DNQ11_03420 PF07504 Fungalysin/Thermolysin Propeptide Motif DNQ11_03440 PF04294 VanW like protein DNQ11_03445 PF03816 Cell envelope-related transcriptional attenuator domain DNQ11_03450 PF01773 Na+ dependent nucleoside transporter N-terminus DNQ11_03450 PF07662 Na+ dependent nucleoside transporter C-terminus DNQ11_03455 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DNQ11_03460 PF03471 Transporter associated domain DNQ11_03460 PF00571 CBS domain DNQ11_03460 PF01595 Cyclin M transmembrane N-terminal domain DNQ11_03465 PF10415 Fumarase C C-terminus DNQ11_03465 PF00206 Lyase DNQ11_03470 PF02652 L-lactate permease DNQ11_03475 PF01022 Bacterial regulatory protein, arsR family DNQ11_03480 PF08141 Small acid-soluble spore protein H family DNQ11_03485 PF00854 POT family DNQ11_03490 PF01497 Periplasmic binding protein DNQ11_03495 PF01032 FecCD transport family DNQ11_03500 PF01032 FecCD transport family DNQ11_03505 PF00005 ABC transporter DNQ11_03510 PF08241 Methyltransferase domain DNQ11_03515 PF00155 Aminotransferase class I and II DNQ11_03520 PF01370 NAD dependent epimerase/dehydratase family DNQ11_03525 PF13344 Haloacid dehalogenase-like hydrolase DNQ11_03525 PF00293 NUDIX domain DNQ11_03530 PF00092 von Willebrand factor type A domain DNQ11_03535 PF07728 AAA domain (dynein-related subfamily) DNQ11_03540 PF13091 PLD-like domain DNQ11_03540 PF13396 Phospholipase_D-nuclease N-terminal DNQ11_03555 PF03707 Bacterial signalling protein N terminal repeat DNQ11_03555 PF00990 Diguanylate cyclase, GGDEF domain DNQ11_03555 PF00563 EAL domain DNQ11_03560 PF13520 Amino acid permease DNQ11_03565 PF07702 UTRA domain DNQ11_03565 PF00392 Bacterial regulatory proteins, gntR family DNQ11_03570 PF00367 phosphotransferase system, EIIB DNQ11_03570 PF02378 Phosphotransferase system, EIIC DNQ11_03575 PF16657 Maltogenic Amylase, C-terminal domain DNQ11_03575 PF00128 Alpha amylase, catalytic domain DNQ11_03590 PF03323 Bacillus/Clostridium GerA spore germination protein DNQ11_03600 PF01636 Phosphotransferase enzyme family DNQ11_03605 PF01235 Sodium:alanine symporter family DNQ11_03610 PF00005 ABC transporter DNQ11_03615 PF00497 Bacterial extracellular solute-binding proteins, family 3 DNQ11_03620 PF00528 Binding-protein-dependent transport system inner membrane component DNQ11_03625 PF00528 Binding-protein-dependent transport system inner membrane component DNQ11_03630 PF00324 Amino acid permease DNQ11_03655 PF13280 WYL domain DNQ11_03655 PF08279 HTH domain DNQ11_03660 PF01872 RibD C-terminal domain DNQ11_03665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_03665 PF00512 His Kinase A (phospho-acceptor) domain DNQ11_03665 PF00989 PAS fold DNQ11_03665 PF18698 Histidine kinase sensor domain DNQ11_03665 PF00672 HAMP domain DNQ11_03670 PF00072 Response regulator receiver domain DNQ11_03670 PF00486 Transcriptional regulatory protein, C terminal DNQ11_03680 PF00916 Sulfate permease family DNQ11_03680 PF01740 STAS domain DNQ11_03685 PF00582 Universal stress protein family DNQ11_03695 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DNQ11_03700 PF00528 Binding-protein-dependent transport system inner membrane component DNQ11_03705 PF00528 Binding-protein-dependent transport system inner membrane component DNQ11_03710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DNQ11_03710 PF00005 ABC transporter DNQ11_03715 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DNQ11_03715 PF00005 ABC transporter DNQ11_03720 PF07690 Major Facilitator Superfamily DNQ11_03725 PF01047 MarR family DNQ11_03735 PF00356 Bacterial regulatory proteins, lacI family DNQ11_03740 PF00294 pfkB family carbohydrate kinase DNQ11_03745 PF05025 RbsD / FucU transport protein family DNQ11_03750 PF00005 ABC transporter DNQ11_03755 PF02653 Branched-chain amino acid transport system / permease component DNQ11_03760 PF13407 Periplasmic binding protein domain DNQ11_03765 PF00923 Transaldolase/Fructose-6-phosphate aldolase DNQ11_03770 PF05547 Immune inhibitor A peptidase M6 DNQ11_03785 PF08240 Alcohol dehydrogenase GroES-like domain DNQ11_03785 PF00107 Zinc-binding dehydrogenase DNQ11_03795 PF00882 Zinc dependent phospholipase C DNQ11_03800 PF03372 Endonuclease/Exonuclease/phosphatase family DNQ11_03825 PF02673 Bacitracin resistance protein BacA DNQ11_03830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DNQ11_03830 PF00672 HAMP domain DNQ11_03830 PF02743 Cache domain DNQ11_03835 PF01476 LysM domain DNQ11_03835 PF06725 3D domain DNQ11_03840 PF01381 Helix-turn-helix DNQ11_03850 PF04203 Sortase domain DNQ11_03855 PF00854 POT family DNQ11_03860 PF05525 Branched-chain amino acid transport protein DNQ11_03875 PF00324 Amino acid permease DNQ11_03880 PF00860 Permease family DNQ11_03905 PF02080 TrkA-C domain DNQ11_03905 PF00999 Sodium/hydrogen exchanger family DNQ11_03905 PF02254 TrkA-N domain DNQ11_03915 PF00510 Cytochrome c oxidase subunit III DNQ11_03920 PF00115 Cytochrome C and Quinol oxidase polypeptide I DNQ11_03925 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DNQ11_03930 PF00324 Amino acid permease DNQ11_03935 PF13529 Peptidase_C39 like family DNQ11_03940 PF07687 Peptidase dimerisation domain DNQ11_03940 PF01546 Peptidase family M20/M25/M40 DNQ11_03945 PF11755 Protein of unknown function (DUF3311) DNQ11_03950 PF00474 Sodium:solute symporter family DNQ11_03955 PF03323 Bacillus/Clostridium GerA spore germination protein DNQ11_03960 PF03845 Spore germination protein DNQ11_03965 PF05504 Spore germination B3/ GerAC like, C-terminal DNQ11_03975 PF07664 Ferrous iron transport protein B C terminus DNQ11_03975 PF17910 FeoB cytosolic helical domain DNQ11_03975 PF02421 Ferrous iron transport protein B DNQ11_03975 PF07670 Nucleoside recognition DNQ11_03980 PF02421 Ferrous iron transport protein B DNQ11_03980 PF17910 FeoB cytosolic helical domain DNQ11_03980 PF07670 Nucleoside recognition DNQ11_03980 PF07664 Ferrous iron transport protein B C terminus DNQ11_03985 PF07670 Nucleoside recognition DNQ11_03985 PF07664 Ferrous iron transport protein B C terminus DNQ11_03985 PF02421 Ferrous iron transport protein B DNQ11_03985 PF17910 FeoB cytosolic helical domain DNQ11_03985 PF04023 FeoA domain DNQ11_03990 PF12849 PBP superfamily domain DNQ11_03995 PF00528 Binding-protein-dependent transport system inner membrane component DNQ11_04000 PF00528 Binding-protein-dependent transport system inner membrane component DNQ11_04010 PF00873 AcrB/AcrD/AcrF family DNQ11_04130 PF00571 CBS domain DNQ11_04150 PF00246 Zinc carboxypeptidase DNQ11_04150 PF08239 Bacterial SH3 domain DNQ11_04155 PF03070 TENA/THI-4/PQQC family DNQ11_04160 PF00005 ABC transporter DNQ11_04165 PF00528 Binding-protein-dependent transport system inner membrane component DNQ11_04170 PF09084 NMT1/THI5 like DNQ11_04175 PF02581 Thiamine monophosphate synthase DNQ11_04180 PF01266 FAD dependent oxidoreductase DNQ11_04185 PF02597 ThiS family DNQ11_04190 PF05690 Thiazole biosynthesis protein ThiG DNQ11_04195 PF00899 ThiF family DNQ11_04200 PF08543 Phosphomethylpyrimidine kinase DNQ11_04230 PF03814 Potassium-transporting ATPase A subunit DNQ11_04240 PF02669 K+-transporting ATPase, c chain DNQ11_04245 PF02702 Osmosensitive K+ channel His kinase sensor domain DNQ11_04250 PF07690 Major Facilitator Superfamily DNQ11_04255 PF01047 MarR family DNQ11_04270 PF00860 Permease family DNQ11_04290 PF00294 pfkB family carbohydrate kinase DNQ11_04295 PF00251 Glycosyl hydrolases family 32 N-terminal domain DNQ11_04295 PF08244 Glycosyl hydrolases family 32 C terminal DNQ11_04300 PF00367 phosphotransferase system, EIIB DNQ11_04300 PF02378 Phosphotransferase system, EIIC DNQ11_04305 PF13407 Periplasmic binding protein domain DNQ11_04305 PF00356 Bacterial regulatory proteins, lacI family DNQ11_04315 PF00085 Thioredoxin DNQ11_04320 PF02600 Disulfide bond formation protein DsbB DNQ11_04325 PF14148 YhdB-like protein DNQ11_04345 PF03323 Bacillus/Clostridium GerA spore germination protein DNQ11_04360 PF00881 Nitroreductase family DNQ11_04365 PF04293 SpoVR like protein DNQ11_04395 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DNQ11_04395 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNQ11_04400 PF02583 Metal-sensitive transcriptional repressor DNQ11_04405 PF01206 Sulfurtransferase TusA DNQ11_04405 PF00581 Rhodanese-like domain DNQ11_04410 PF00581 Rhodanese-like domain DNQ11_04410 PF00753 Metallo-beta-lactamase superfamily DNQ11_04415 PF01206 Sulfurtransferase TusA DNQ11_04420 PF00581 Rhodanese-like domain DNQ11_04430 PF13686 DsrE/DsrF/DrsH-like family DNQ11_04435 PF01925 Sulfite exporter TauE/SafE DNQ11_04445 PF03816 Cell envelope-related transcriptional attenuator domain DNQ11_04450 PF00107 Zinc-binding dehydrogenase DNQ11_04450 PF08240 Alcohol dehydrogenase GroES-like domain DNQ11_04455 PF02690 Na+/Pi-cotransporter DNQ11_04460 PF07690 Major Facilitator Superfamily DNQ11_04470 PF00874 PRD domain DNQ11_04470 PF05043 Mga helix-turn-helix domain DNQ11_04470 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DNQ11_04470 PF08279 HTH domain DNQ11_04475 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DNQ11_04480 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DNQ11_04485 PF02378 Phosphotransferase system, EIIC DNQ11_04500 PF06725 3D domain DNQ11_04500 PF01476 LysM domain DNQ11_04505 PF12704 MacB-like periplasmic core domain DNQ11_04505 PF02687 FtsX-like permease family DNQ11_04510 PF00005 ABC transporter DNQ11_04520 PF09529 Integral membrane protein (intg_mem_TP0381) DNQ11_04535 PF05525 Branched-chain amino acid transport protein DNQ11_04540 PF05067 Manganese containing catalase DNQ11_04545 PF12652 CotJB protein DNQ11_04550 PF11007 Spore coat associated protein JA (CotJA) DNQ11_04565 PF02735 Ku70/Ku80 beta-barrel domain DNQ11_04575 PF09335 SNARE associated Golgi protein DNQ11_04615 PF13520 Amino acid permease DNQ11_04620 PF00999 Sodium/hydrogen exchanger family DNQ11_04630 PF01380 SIS domain DNQ11_04630 PF01418 Helix-turn-helix domain, rpiR family DNQ11_04635 PF01380 SIS domain DNQ11_04640 PF00367 phosphotransferase system, EIIB DNQ11_04640 PF02378 Phosphotransferase system, EIIC DNQ11_04650 PF07681 DoxX DNQ11_04665 PF00892 EamA-like transporter family DNQ11_04670 PF01037 Lrp/AsnC ligand binding domain DNQ11_04680 PF00893 Small Multidrug Resistance protein DNQ11_04685 PF00893 Small Multidrug Resistance protein DNQ11_04690 PF00440 Bacterial regulatory proteins, tetR family DNQ11_04690 PF17934 Tetracyclin repressor-like, C-terminal domain DNQ11_04695 PF07690 Major Facilitator Superfamily DNQ11_04700 PF01638 HxlR-like helix-turn-helix DNQ11_04710 PF02525 Flavodoxin-like fold DNQ11_04715 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DNQ11_04715 PF12793 Sugar transport-related sRNA regulator N-term DNQ11_04720 PF07690 Major Facilitator Superfamily DNQ11_04730 PF01965 DJ-1/PfpI family DNQ11_04735 PF00199 Catalase DNQ11_04735 PF18011 C-terminal domain found in long catalases DNQ11_04735 PF06628 Catalase-related immune-responsive DNQ11_04745 PF13520 Amino acid permease DNQ11_04750 PF01177 Asp/Glu/Hydantoin racemase DNQ11_04760 PF00171 Aldehyde dehydrogenase family DNQ11_04780 PF00005 ABC transporter DNQ11_04780 PF00664 ABC transporter transmembrane region DNQ11_04795 PF00497 Bacterial extracellular solute-binding proteins, family 3 DNQ11_04800 PF00528 Binding-protein-dependent transport system inner membrane component DNQ11_04805 PF00005 ABC transporter DNQ11_04810 PF00269 Small, acid-soluble spore proteins, alpha/beta type DNQ11_04820 PF14398 YheC/D like ATP-grasp DNQ11_04830 PF04286 Protein of unknown function (DUF445) DNQ11_04835 PF06133 Control of competence regulator ComK, YlbF/YmcA DNQ11_04850 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DNQ11_04850 PF00205 Thiamine pyrophosphate enzyme, central domain DNQ11_04850 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DNQ11_04855 PF03306 Alpha-acetolactate decarboxylase DNQ11_04865 PF02245 Methylpurine-DNA glycosylase (MPG) DNQ11_04880 PF01476 LysM domain DNQ11_04880 PF01510 N-acetylmuramoyl-L-alanine amidase DNQ11_04880 PF01471 Putative peptidoglycan binding domain DNQ11_04890 PF04055 Radical SAM superfamily DNQ11_04895 PF13193 AMP-binding enzyme C-terminal domain DNQ11_04895 PF00501 AMP-binding enzyme DNQ11_04905 PF00916 Sulfate permease family DNQ11_04905 PF01740 STAS domain DNQ11_04925 PF07517 SecA DEAD-like domain DNQ11_04925 PF07516 SecA Wing and Scaffold domain DNQ11_04925 PF01043 SecA preprotein cross-linking domain DNQ11_04930 PF14667 Polysaccharide biosynthesis C-terminal domain DNQ11_04930 PF01943 Polysaccharide biosynthesis protein DNQ11_04940 PF00395 S-layer homology domain DNQ11_04940 PF13205 Bacterial Ig-like domain DNQ11_04940 PF02368 Bacterial Ig-like domain (group 2) DNQ11_04945 PF00395 S-layer homology domain DNQ11_04955 PF03062 MBOAT, membrane-bound O-acyltransferase family DNQ11_04960 PF03062 MBOAT, membrane-bound O-acyltransferase family DNQ11_04980 PF00378 Enoyl-CoA hydratase/isomerase DNQ11_05000 PF05343 M42 glutamyl aminopeptidase DNQ11_05005 PF01520 N-acetylmuramoyl-L-alanine amidase DNQ11_05005 PF00395 S-layer homology domain DNQ11_05015 PF11121 Protein of unknown function (DUF2639) DNQ11_05020 PF05544 Proline racemase DNQ11_05025 PF02423 Ornithine cyclodeaminase/mu-crystallin family DNQ11_05030 PF18593 CdiI immunity protein DNQ11_05050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DNQ11_05055 PF00528 Binding-protein-dependent transport system inner membrane component DNQ11_05060 PF12911 N-terminal TM domain of oligopeptide transport permease C DNQ11_05060 PF00528 Binding-protein-dependent transport system inner membrane component DNQ11_05070 PF00005 ABC transporter DNQ11_05070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DNQ11_05080 PF01541 GIY-YIG catalytic domain DNQ11_05115 PF00083 Sugar (and other) transporter DNQ11_05120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_05120 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DNQ11_05125 PF08279 HTH domain DNQ11_05125 PF00072 Response regulator receiver domain DNQ11_05125 PF12431 Transcriptional regulator DNQ11_05130 PF03401 Tripartite tricarboxylate transporter family receptor DNQ11_05135 PF02342 TerD domain DNQ11_05160 PF06445 GyrI-like small molecule binding domain DNQ11_05160 PF13411 MerR HTH family regulatory protein DNQ11_05175 PF03796 DnaB-like helicase C terminal domain DNQ11_05175 PF00772 DnaB-like helicase N terminal domain DNQ11_05205 PF01925 Sulfite exporter TauE/SafE DNQ11_05225 PF07690 Major Facilitator Superfamily DNQ11_05280 PF18665 Tetracyclin repressor-like, C-terminal domain DNQ11_05280 PF00440 Bacterial regulatory proteins, tetR family DNQ11_05300 PF01066 CDP-alcohol phosphatidyltransferase DNQ11_05325 PF02733 Dak1 domain DNQ11_05340 PF02733 Dak1 domain DNQ11_05345 PF02525 Flavodoxin-like fold DNQ11_05350 PF02082 Transcriptional regulator DNQ11_05385 PF01966 HD domain DNQ11_05385 PF00672 HAMP domain DNQ11_05420 PF00395 S-layer homology domain DNQ11_05445 PF11181 Heat induced stress protein YflT DNQ11_05450 PF05532 CsbD-like DNQ11_05465 PF01740 STAS domain DNQ11_05470 PF13581 Histidine kinase-like ATPase domain DNQ11_05475 PF04542 Sigma-70 region 2 DNQ11_05475 PF04539 Sigma-70 region 3 DNQ11_05475 PF04545 Sigma-70, region 4 DNQ11_05485 PF13426 PAS domain DNQ11_05485 PF07228 Stage II sporulation protein E (SpoIIE) DNQ11_05490 PF01739 CheR methyltransferase, SAM binding domain DNQ11_05490 PF03705 CheR methyltransferase, all-alpha domain DNQ11_05495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_05495 PF00512 His Kinase A (phospho-acceptor) domain DNQ11_05495 PF01627 Hpt domain DNQ11_05495 PF00072 Response regulator receiver domain DNQ11_05495 PF00497 Bacterial extracellular solute-binding proteins, family 3 DNQ11_05520 PF01906 Putative heavy-metal-binding DNQ11_05535 PF08240 Alcohol dehydrogenase GroES-like domain DNQ11_05535 PF00107 Zinc-binding dehydrogenase DNQ11_05540 PF11121 Protein of unknown function (DUF2639) DNQ11_05555 PF00149 Calcineurin-like phosphoesterase DNQ11_05560 PF13514 AAA domain DNQ11_05575 PF01966 HD domain DNQ11_05575 PF01336 OB-fold nucleic acid binding domain DNQ11_05580 PF00440 Bacterial regulatory proteins, tetR family DNQ11_05585 PF07690 Major Facilitator Superfamily DNQ11_05590 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DNQ11_05600 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DNQ11_05605 PF18801 response regulator aspartate phosphatase H, N terminal DNQ11_05615 PF08386 TAP-like protein DNQ11_05615 PF00561 alpha/beta hydrolase fold DNQ11_05635 PF04309 Glycerol-3-phosphate responsive antiterminator DNQ11_05640 PF00230 Major intrinsic protein DNQ11_05645 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DNQ11_05645 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DNQ11_05650 PF01266 FAD dependent oxidoreductase DNQ11_05650 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DNQ11_05670 PF08281 Sigma-70, region 4 DNQ11_05670 PF04542 Sigma-70 region 2 DNQ11_05695 PF07690 Major Facilitator Superfamily DNQ11_05700 PF07690 Major Facilitator Superfamily DNQ11_05710 PF13538 UvrD-like helicase C-terminal domain DNQ11_05735 PF01047 MarR family DNQ11_05740 PF12732 YtxH-like protein DNQ11_05745 PF01230 HIT domain DNQ11_05755 PF00005 ABC transporter DNQ11_05760 PF05975 Bacterial ABC transporter protein EcsB DNQ11_05765 PF12787 EcsC protein family DNQ11_05775 PF17934 Tetracyclin repressor-like, C-terminal domain DNQ11_05775 PF00440 Bacterial regulatory proteins, tetR family DNQ11_05785 PF03703 Bacterial PH domain DNQ11_05835 PF03703 Bacterial PH domain DNQ11_05840 PF03703 Bacterial PH domain DNQ11_05845 PF03992 Antibiotic biosynthesis monooxygenase DNQ11_05850 PF00905 Penicillin binding protein transpeptidase domain DNQ11_05850 PF00912 Transglycosylase DNQ11_05855 PF01208 Uroporphyrinogen decarboxylase (URO-D) DNQ11_05890 PF03965 Penicillinase repressor DNQ11_05900 PF17932 Tetracyclin repressor-like, C-terminal domain DNQ11_05900 PF00440 Bacterial regulatory proteins, tetR family DNQ11_05930 PF00356 Bacterial regulatory proteins, lacI family DNQ11_05935 PF14149 YhfH-like protein DNQ11_05940 PF12706 Beta-lactamase superfamily domain DNQ11_05945 PF10437 Bacterial lipoate protein ligase C-terminus DNQ11_05945 PF03099 Biotin/lipoate A/B protein ligase family DNQ11_05955 PF00501 AMP-binding enzyme DNQ11_05955 PF13193 AMP-binding enzyme C-terminal domain DNQ11_05965 PF00395 S-layer homology domain DNQ11_05965 PF01520 N-acetylmuramoyl-L-alanine amidase DNQ11_05970 PF05593 RHS Repeat DNQ11_05985 PF05593 RHS Repeat DNQ11_06020 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DNQ11_06030 PF01966 HD domain DNQ11_06040 PF08281 Sigma-70, region 4 DNQ11_06040 PF04542 Sigma-70 region 2 DNQ11_06045 PF06445 GyrI-like small molecule binding domain DNQ11_06045 PF12833 Helix-turn-helix domain DNQ11_06060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_06060 PF00512 His Kinase A (phospho-acceptor) domain DNQ11_06065 PF00072 Response regulator receiver domain DNQ11_06065 PF00486 Transcriptional regulatory protein, C terminal DNQ11_06090 PF01435 Peptidase family M48 DNQ11_06090 PF16491 CAAX prenyl protease N-terminal, five membrane helices DNQ11_06095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DNQ11_06095 PF00672 HAMP domain DNQ11_06095 PF02743 Cache domain DNQ11_06100 PF00892 EamA-like transporter family DNQ11_06105 PF03424 Carbohydrate binding domain (family 17/28) DNQ11_06105 PF00395 S-layer homology domain DNQ11_06105 PF00150 Cellulase (glycosyl hydrolase family 5) DNQ11_06115 PF00395 S-layer homology domain DNQ11_06120 PF01274 Malate synthase DNQ11_06125 PF00463 Isocitrate lyase family DNQ11_06135 PF00313 'Cold-shock' DNA-binding domain DNQ11_06150 PF06338 ComK protein DNQ11_06155 PF09335 SNARE associated Golgi protein DNQ11_06160 PF10502 Signal peptidase, peptidase S26 DNQ11_06165 PF12705 PD-(D/E)XK nuclease superfamily DNQ11_06165 PF13361 UvrD-like helicase C-terminal domain DNQ11_06170 PF12705 PD-(D/E)XK nuclease superfamily DNQ11_06170 PF00580 UvrD/REP helicase N-terminal domain DNQ11_06170 PF13361 UvrD-like helicase C-terminal domain DNQ11_06180 PF10676 Spore germination protein gerPA/gerPF DNQ11_06185 PF10970 Spore germination protein GerPE DNQ11_06195 PF10737 Spore germination protein GerPC DNQ11_06200 PF10803 Spore germination GerPB DNQ11_06205 PF10676 Spore germination protein gerPA/gerPF DNQ11_06215 PF01557 Fumarylacetoacetate (FAA) hydrolase family DNQ11_06225 PF00202 Aminotransferase class-III DNQ11_06230 PF07457 Protein of unknown function (DUF1516) DNQ11_06240 PF00733 Asparagine synthase DNQ11_06240 PF13537 Glutamine amidotransferase domain DNQ11_06250 PF00199 Catalase DNQ11_06250 PF06628 Catalase-related immune-responsive DNQ11_06255 PF00909 Ammonium Transporter Family DNQ11_06265 PF00128 Alpha amylase, catalytic domain DNQ11_06275 PF04461 Protein of unknown function (DUF520) DNQ11_06280 PF13509 S1 domain DNQ11_06280 PF17783 CvfB-like winged helix domain DNQ11_06290 PF00639 PPIC-type PPIASE domain DNQ11_06300 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DNQ11_06300 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DNQ11_06305 PF12758 Protein of unknown function (DUF3813) DNQ11_06325 PF14168 YjzC-like protein DNQ11_06330 PF00004 ATPase family associated with various cellular activities (AAA) DNQ11_06330 PF10431 C-terminal, D2-small domain, of ClpB protein DNQ11_06330 PF17871 AAA lid domain DNQ11_06330 PF02861 Clp amino terminal domain, pathogenicity island component DNQ11_06330 PF07724 AAA domain (Cdc48 subfamily) DNQ11_06350 PF10815 ComZ DNQ11_06360 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DNQ11_06360 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DNQ11_06365 PF00109 Beta-ketoacyl synthase, N-terminal domain DNQ11_06365 PF02801 Beta-ketoacyl synthase, C-terminal domain DNQ11_06370 PF10026 Predicted Zn-dependent protease (DUF2268) DNQ11_06375 PF12227 Protein of unknown function (DUF3603) DNQ11_06385 PF00579 tRNA synthetases class I (W and Y) DNQ11_06400 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DNQ11_06405 PF00528 Binding-protein-dependent transport system inner membrane component DNQ11_06410 PF12911 N-terminal TM domain of oligopeptide transport permease C DNQ11_06410 PF00528 Binding-protein-dependent transport system inner membrane component DNQ11_06415 PF00005 ABC transporter DNQ11_06415 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DNQ11_06420 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DNQ11_06420 PF00005 ABC transporter DNQ11_06425 PF01554 MatE DNQ11_06430 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DNQ11_06445 PF03960 ArsC family DNQ11_06450 PF03741 Integral membrane protein TerC family DNQ11_06455 PF05389 Negative regulator of genetic competence (MecA) DNQ11_06460 PF13091 PLD-like domain DNQ11_06460 PF13396 Phospholipase_D-nuclease N-terminal DNQ11_06470 PF08439 Oligopeptidase F DNQ11_06470 PF01432 Peptidase family M3 DNQ11_06485 PF01152 Bacterial-like globin DNQ11_06490 PF01928 CYTH domain DNQ11_06500 PF04607 Region found in RelA / SpoT proteins DNQ11_06505 PF01513 ATP-NAD kinase DNQ11_06510 PF00849 RNA pseudouridylate synthase DNQ11_06520 PF00149 Calcineurin-like phosphoesterase DNQ11_06530 PF00535 Glycosyl transferase family 2 DNQ11_06535 PF08241 Methyltransferase domain DNQ11_06540 PF05711 Macrocin-O-methyltransferase (TylF) DNQ11_06550 PF00535 Glycosyl transferase family 2 DNQ11_06550 PF13181 Tetratricopeptide repeat DNQ11_06570 PF00483 Nucleotidyl transferase DNQ11_06575 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DNQ11_06580 PF16363 GDP-mannose 4,6 dehydratase DNQ11_06585 PF04321 RmlD substrate binding domain DNQ11_06605 PF07098 Protein of unknown function (DUF1360) DNQ11_06625 PF00580 UvrD/REP helicase N-terminal domain DNQ11_06625 PF13361 UvrD-like helicase C-terminal domain DNQ11_06630 PF13673 Acetyltransferase (GNAT) domain DNQ11_06640 PF00756 Putative esterase DNQ11_06655 PF02368 Bacterial Ig-like domain (group 2) DNQ11_06660 PF00474 Sodium:solute symporter family DNQ11_06675 PF00117 Glutamine amidotransferase class-I DNQ11_06675 PF02885 Glycosyl transferase family, helical bundle domain DNQ11_06675 PF00591 Glycosyl transferase family, a/b domain DNQ11_06680 PF02885 Glycosyl transferase family, helical bundle domain DNQ11_06680 PF00591 Glycosyl transferase family, a/b domain DNQ11_06685 PF00218 Indole-3-glycerol phosphate synthase DNQ11_06690 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DNQ11_06695 PF00291 Pyridoxal-phosphate dependent enzyme DNQ11_06700 PF00290 Tryptophan synthase alpha chain DNQ11_06710 PF02652 L-lactate permease DNQ11_06715 PF10042 Uncharacterized conserved protein (DUF2278) DNQ11_06745 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNQ11_06745 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DNQ11_06775 PF02817 e3 binding domain DNQ11_06775 PF00364 Biotin-requiring enzyme DNQ11_06775 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DNQ11_06780 PF02779 Transketolase, pyrimidine binding domain DNQ11_06780 PF16870 2-oxoglutarate dehydrogenase C-terminal DNQ11_06780 PF00676 Dehydrogenase E1 component DNQ11_06785 PF01381 Helix-turn-helix DNQ11_06845 PF13649 Methyltransferase domain DNQ11_06860 PF00768 D-alanyl-D-alanine carboxypeptidase DNQ11_06860 PF07943 Penicillin-binding protein 5, C-terminal domain DNQ11_06870 PF12389 Camelysin metallo-endopeptidase DNQ11_06880 PF12389 Camelysin metallo-endopeptidase DNQ11_06885 PF01381 Helix-turn-helix DNQ11_06885 PF08671 Anti-repressor SinI DNQ11_06895 PF05547 Immune inhibitor A peptidase M6 DNQ11_06900 PF00171 Aldehyde dehydrogenase family DNQ11_06905 PF00005 ABC transporter DNQ11_06905 PF08402 TOBE domain DNQ11_06910 PF00528 Binding-protein-dependent transport system inner membrane component DNQ11_06915 PF00528 Binding-protein-dependent transport system inner membrane component DNQ11_06920 PF13416 Bacterial extracellular solute-binding protein DNQ11_06930 PF03176 MMPL family DNQ11_06940 PF01479 S4 domain DNQ11_06940 PF00849 RNA pseudouridylate synthase DNQ11_06950 PF00188 Cysteine-rich secretory protein family DNQ11_06955 PF02754 Cysteine-rich domain DNQ11_06955 PF13183 4Fe-4S dicluster domain DNQ11_06960 PF01565 FAD binding domain DNQ11_06960 PF02913 FAD linked oxidases, C-terminal domain DNQ11_06965 PF17853 GGDEF-like domain DNQ11_06965 PF05651 Putative sugar diacid recognition DNQ11_06965 PF13556 PucR C-terminal helix-turn-helix domain DNQ11_06975 PF00072 Response regulator receiver domain DNQ11_06975 PF00486 Transcriptional regulatory protein, C terminal DNQ11_06980 PF00512 His Kinase A (phospho-acceptor) domain DNQ11_06980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_06980 PF00672 HAMP domain DNQ11_06980 PF00989 PAS fold DNQ11_06980 PF18698 Histidine kinase sensor domain DNQ11_06985 PF07729 FCD domain DNQ11_06985 PF00392 Bacterial regulatory proteins, gntR family DNQ11_06990 PF02754 Cysteine-rich domain DNQ11_06995 PF02589 LUD domain DNQ11_06995 PF13183 4Fe-4S dicluster domain DNQ11_06995 PF11870 Domain of unknown function (DUF3390) DNQ11_07000 PF02589 LUD domain DNQ11_07005 PF01478 Type IV leader peptidase family DNQ11_07005 PF06750 Bacterial Peptidase A24 N-terminal domain DNQ11_07015 PF01226 Formate/nitrite transporter DNQ11_07020 PF03741 Integral membrane protein TerC family DNQ11_07025 PF02386 Cation transport protein DNQ11_07030 PF00269 Small, acid-soluble spore proteins, alpha/beta type DNQ11_07035 PF01575 MaoC like domain DNQ11_07060 PF00561 alpha/beta hydrolase fold DNQ11_07070 PF02386 Cation transport protein DNQ11_07105 PF13419 Haloacid dehalogenase-like hydrolase DNQ11_07110 PF00266 Aminotransferase class-V DNQ11_07120 PF00455 DeoR C terminal sensor domain DNQ11_07120 PF08220 DeoR-like helix-turn-helix domain DNQ11_07145 PF04748 Divergent polysaccharide deacetylase DNQ11_07150 PF09388 Spo0E like sporulation regulatory protein DNQ11_07155 PF00512 His Kinase A (phospho-acceptor) domain DNQ11_07155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_07155 PF02743 Cache domain DNQ11_07160 PF01047 MarR family DNQ11_07170 PF12867 DinB superfamily DNQ11_07180 PF13426 PAS domain DNQ11_07180 PF13188 PAS domain DNQ11_07180 PF00989 PAS fold DNQ11_07180 PF00512 His Kinase A (phospho-acceptor) domain DNQ11_07180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_07185 PF06508 Queuosine biosynthesis protein QueC DNQ11_07190 PF01242 6-pyruvoyl tetrahydropterin synthase DNQ11_07195 PF04055 Radical SAM superfamily DNQ11_07200 PF14489 QueF-like protein DNQ11_07205 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) DNQ11_07240 PF07972 NrdI Flavodoxin like DNQ11_07260 PF00268 Ribonucleotide reductase, small chain DNQ11_07265 PF00392 Bacterial regulatory proteins, gntR family DNQ11_07270 PF00005 ABC transporter DNQ11_07280 PF00005 ABC transporter DNQ11_07300 PF01037 Lrp/AsnC ligand binding domain DNQ11_07310 PF00857 Isochorismatase family DNQ11_07320 PF02016 LD-carboxypeptidase N-terminal domain DNQ11_07320 PF17676 LD-carboxypeptidase C-terminal domain DNQ11_07325 PF03060 Nitronate monooxygenase DNQ11_07330 PF04914 DltD protein DNQ11_07335 PF00550 Phosphopantetheine attachment site DNQ11_07340 PF03062 MBOAT, membrane-bound O-acyltransferase family DNQ11_07345 PF13193 AMP-binding enzyme C-terminal domain DNQ11_07345 PF00501 AMP-binding enzyme DNQ11_07355 PF01546 Peptidase family M20/M25/M40 DNQ11_07355 PF07687 Peptidase dimerisation domain DNQ11_07365 PF00258 Flavodoxin DNQ11_07380 PF01636 Phosphotransferase enzyme family DNQ11_07405 PF01554 MatE DNQ11_07410 PF02673 Bacitracin resistance protein BacA DNQ11_07425 PF01047 MarR family DNQ11_07435 PF00375 Sodium:dicarboxylate symporter family DNQ11_07440 PF02386 Cation transport protein DNQ11_07450 PF09579 Sporulation protein YtfJ (Spore_YtfJ) DNQ11_07465 PF03698 Uncharacterised protein family (UPF0180) DNQ11_07480 PF01063 Amino-transferase class IV DNQ11_07485 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DNQ11_07485 PF00205 Thiamine pyrophosphate enzyme, central domain DNQ11_07485 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DNQ11_07490 PF10369 Small subunit of acetolactate synthase DNQ11_07490 PF01842 ACT domain DNQ11_07495 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DNQ11_07495 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DNQ11_07500 PF08502 LeuA allosteric (dimerisation) domain DNQ11_07500 PF00682 HMGL-like DNQ11_07505 PF00180 Isocitrate/isopropylmalate dehydrogenase DNQ11_07510 PF00330 Aconitase family (aconitate hydratase) DNQ11_07515 PF00694 Aconitase C-terminal domain DNQ11_07520 PF13393 Histidyl-tRNA synthetase DNQ11_07525 PF01634 ATP phosphoribosyltransferase DNQ11_07530 PF00815 Histidinol dehydrogenase DNQ11_07535 PF00475 Imidazoleglycerol-phosphate dehydratase DNQ11_07540 PF00117 Glutamine amidotransferase class-I DNQ11_07545 PF00977 Histidine biosynthesis protein DNQ11_07550 PF00977 Histidine biosynthesis protein DNQ11_07555 PF01502 Phosphoribosyl-AMP cyclohydrolase DNQ11_07560 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DNQ11_07565 PF02811 PHP domain DNQ11_07575 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DNQ11_07575 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DNQ11_07580 PF01066 CDP-alcohol phosphatidyltransferase DNQ11_07585 PF00884 Sulfatase DNQ11_07595 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DNQ11_07595 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DNQ11_07605 PF01507 Phosphoadenosine phosphosulfate reductase family DNQ11_07610 PF14306 PUA-like domain DNQ11_07610 PF01747 ATP-sulfurylase DNQ11_07620 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DNQ11_07620 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DNQ11_07630 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DNQ11_07635 PF01903 CbiX DNQ11_07650 PF00209 Sodium:neurotransmitter symporter family DNQ11_07660 PF00375 Sodium:dicarboxylate symporter family DNQ11_07670 PF03553 Na+/H+ antiporter family DNQ11_07685 PF09922 Cell wall-active antibiotics response 4TMS YvqF DNQ11_07690 PF07730 Histidine kinase DNQ11_07690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_07690 PF00672 HAMP domain DNQ11_07695 PF00196 Bacterial regulatory proteins, luxR family DNQ11_07695 PF00072 Response regulator receiver domain DNQ11_07705 PF05525 Branched-chain amino acid transport protein DNQ11_07715 PF08241 Methyltransferase domain DNQ11_07740 PF00970 Oxidoreductase FAD-binding domain DNQ11_07740 PF00175 Oxidoreductase NAD-binding domain DNQ11_07740 PF00042 Globin DNQ11_07760 PF01925 Sulfite exporter TauE/SafE DNQ11_07765 PF01384 Phosphate transporter family DNQ11_07770 PF01865 Protein of unknown function DUF47 DNQ11_07775 PF00905 Penicillin binding protein transpeptidase domain DNQ11_07775 PF00912 Transglycosylase DNQ11_07795 PF00989 PAS fold DNQ11_07795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_07795 PF00512 His Kinase A (phospho-acceptor) domain DNQ11_07800 PF01904 Protein of unknown function DUF72 DNQ11_07810 PF00589 Phage integrase family DNQ11_07815 PF00512 His Kinase A (phospho-acceptor) domain DNQ11_07815 PF00989 PAS fold DNQ11_07815 PF16736 Single Cache-like DNQ11_07815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_07820 PF01048 Phosphorylase superfamily DNQ11_07845 PF09924 Uncharacterised conserved protein (DUF2156) DNQ11_07845 PF03706 Lysylphosphatidylglycerol synthase TM region DNQ11_07860 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DNQ11_07860 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DNQ11_07865 PF07943 Penicillin-binding protein 5, C-terminal domain DNQ11_07865 PF00768 D-alanyl-D-alanine carboxypeptidase DNQ11_07870 PF07670 Nucleoside recognition DNQ11_07875 PF07670 Nucleoside recognition DNQ11_07880 PF01479 S4 domain DNQ11_07880 PF00849 RNA pseudouridylate synthase DNQ11_07885 PF00578 AhpC/TSA family DNQ11_07890 PF05140 ResB-like family DNQ11_07895 PF01578 Cytochrome C assembly protein DNQ11_07900 PF00072 Response regulator receiver domain DNQ11_07900 PF00486 Transcriptional regulatory protein, C terminal DNQ11_07905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_07905 PF18698 Histidine kinase sensor domain DNQ11_07905 PF00512 His Kinase A (phospho-acceptor) domain DNQ11_07905 PF00989 PAS fold DNQ11_07905 PF00672 HAMP domain DNQ11_07910 PF01923 Cobalamin adenosyltransferase DNQ11_07925 PF12822 ECF transporter, substrate-specific component DNQ11_07935 PF14493 Helix-turn-helix domain DNQ11_07940 PF00270 DEAD/DEAH box helicase DNQ11_07940 PF00271 Helicase conserved C-terminal domain DNQ11_07945 PF02517 CPBP intramembrane metalloprotease DNQ11_07960 PF13411 MerR HTH family regulatory protein DNQ11_07960 PF02607 B12 binding domain DNQ11_07960 PF02310 B12 binding domain DNQ11_07965 PF05389 Negative regulator of genetic competence (MecA) DNQ11_07970 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DNQ11_07970 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DNQ11_07995 PF00710 Asparaginase, N-terminal DNQ11_07995 PF17763 Glutaminase/Asparaginase C-terminal domain DNQ11_08005 PF02224 Cytidylate kinase DNQ11_08010 PF00575 S1 RNA binding domain DNQ11_08015 PF01070 FMN-dependent dehydrogenase DNQ11_08020 PF14140 YpzI-like protein DNQ11_08030 PF14045 YIEGIA protein DNQ11_08040 PF01926 50S ribosome-binding GTPase DNQ11_08040 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DNQ11_08045 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DNQ11_08045 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DNQ11_08055 PF10966 Protein of unknown function (DUF2768) DNQ11_08065 PF09547 Stage IV sporulation protein A (spore_IV_A) DNQ11_08070 PF00216 Bacterial DNA-binding protein DNQ11_08075 PF01227 GTP cyclohydrolase I DNQ11_08080 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 DNQ11_08085 PF01209 ubiE/COQ5 methyltransferase family DNQ11_08090 PF00348 Polyprenyl synthetase DNQ11_08095 PF00334 Nucleoside diphosphate kinase DNQ11_08100 PF01264 Chorismate synthase DNQ11_08105 PF01761 3-dehydroquinate synthase DNQ11_08110 PF00155 Aminotransferase class I and II DNQ11_08120 PF08858 IDEAL domain DNQ11_08120 PF08864 UPF0302 domain DNQ11_08125 PF10673 Protein of unknown function (DUF2487) DNQ11_08130 PF00355 Rieske [2Fe-2S] domain DNQ11_08135 PF00033 Cytochrome b/b6/petB DNQ11_08140 PF00032 Cytochrome b(C-terminal)/b6/petD DNQ11_08140 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DNQ11_08150 PF07187 Protein of unknown function (DUF1405) DNQ11_08160 PF09577 Sporulation protein YpjB (SpoYpjB) DNQ11_08165 PF04298 Putative neutral zinc metallopeptidase DNQ11_08175 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DNQ11_08175 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DNQ11_08185 PF03819 MazG nucleotide pyrophosphohydrolase domain DNQ11_08190 PF01113 Dihydrodipicolinate reductase, N-terminus DNQ11_08190 PF05173 Dihydrodipicolinate reductase, C-terminus DNQ11_08195 PF02142 MGS-like domain DNQ11_08200 PF02585 GlcNAc-PI de-N-acetylase DNQ11_08205 PF00534 Glycosyl transferases group 1 DNQ11_08205 PF13439 Glycosyltransferase Family 4 DNQ11_08210 PF13735 tRNA nucleotidyltransferase domain 2 putative DNQ11_08210 PF12627 Probable RNA and SrmB- binding site of polymerase A DNQ11_08210 PF01743 Poly A polymerase head domain DNQ11_08215 PF08279 HTH domain DNQ11_08215 PF03099 Biotin/lipoate A/B protein ligase family DNQ11_08215 PF02237 Biotin protein ligase C terminal domain DNQ11_08230 PF02548 Ketopantoate hydroxymethyltransferase DNQ11_08235 PF02569 Pantoate-beta-alanine ligase DNQ11_08240 PF02261 Aspartate decarboxylase DNQ11_08245 PF00929 Exonuclease DNQ11_08245 PF04851 Type III restriction enzyme, res subunit DNQ11_08245 PF13307 Helicase C-terminal domain DNQ11_08250 PF14084 Protein of unknown function (DUF4264) DNQ11_08260 PF00155 Aminotransferase class I and II DNQ11_08265 PF07261 Replication initiation and membrane attachment DNQ11_08270 PF00730 HhH-GPD superfamily base excision DNA repair protein DNQ11_08270 PF10576 Iron-sulfur binding domain of endonuclease III DNQ11_08270 PF00633 Helix-hairpin-helix motif DNQ11_08280 PF00905 Penicillin binding protein transpeptidase domain DNQ11_08280 PF00912 Transglycosylase DNQ11_08285 PF03838 Recombination protein U DNQ11_08290 PF10720 Protein of unknown function (DUF2515) DNQ11_08325 PF06908 YspA SLOG family DNQ11_08330 PF05103 DivIVA protein DNQ11_08340 PF01170 Putative RNA methylase family UPF0020 DNQ11_08340 PF02926 THUMP domain DNQ11_08350 PF13307 Helicase C-terminal domain DNQ11_08355 PF02074 Carboxypeptidase Taq (M32) metallopeptidase DNQ11_08365 PF01636 Phosphotransferase enzyme family DNQ11_08370 PF00557 Metallopeptidase family M24 DNQ11_08375 PF00156 Phosphoribosyl transferase domain DNQ11_08380 PF00860 Permease family DNQ11_08385 PF04235 Protein of unknown function (DUF418) DNQ11_08395 PF00350 Dynamin family DNQ11_08405 PF00583 Acetyltransferase (GNAT) family DNQ11_08410 PF10752 Protein of unknown function (DUF2533) DNQ11_08415 PF00581 Rhodanese-like domain DNQ11_08440 PF03738 Glutathionylspermidine synthase preATP-grasp DNQ11_08450 PF00689 Cation transporting ATPase, C-terminus DNQ11_08450 PF00690 Cation transporter/ATPase, N-terminus DNQ11_08455 PF01367 5'-3' exonuclease, C-terminal SAM fold DNQ11_08455 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DNQ11_08485 PF02397 Bacterial sugar transferase DNQ11_08500 PF00535 Glycosyl transferase family 2 DNQ11_08505 PF00534 Glycosyl transferases group 1 DNQ11_08505 PF13439 Glycosyltransferase Family 4 DNQ11_08520 PF13673 Acetyltransferase (GNAT) domain DNQ11_08520 PF18014 Acetyltransferase (GNAT) domain DNQ11_08540 PF13456 Reverse transcriptase-like DNQ11_08545 PF01263 Aldose 1-epimerase DNQ11_08570 PF00313 'Cold-shock' DNA-binding domain DNQ11_08580 PF01810 LysE type translocator DNQ11_08595 PF04341 Protein of unknown function, DUF485 DNQ11_08600 PF00474 Sodium:solute symporter family DNQ11_08605 PF00202 Aminotransferase class-III DNQ11_08620 PF00999 Sodium/hydrogen exchanger family DNQ11_08625 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DNQ11_08625 PF00753 Metallo-beta-lactamase superfamily DNQ11_08625 PF17770 Ribonuclease J C-terminal domain DNQ11_08630 PF13411 MerR HTH family regulatory protein DNQ11_08630 PF06445 GyrI-like small molecule binding domain DNQ11_08640 PF04239 Protein of unknown function (DUF421) DNQ11_08645 PF02698 DUF218 domain DNQ11_08655 PF00881 Nitroreductase family DNQ11_08700 PF17209 Hfq protein DNQ11_08710 PF01618 MotA/TolQ/ExbB proton channel family DNQ11_08715 PF00691 OmpA family DNQ11_08715 PF13677 Membrane MotB of proton-channel complex MotA/MotB DNQ11_08720 PF00072 Response regulator receiver domain DNQ11_08730 PF04509 CheC-like family DNQ11_08730 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DNQ11_08745 PF01739 CheR methyltransferase, SAM binding domain DNQ11_08745 PF03705 CheR methyltransferase, all-alpha domain DNQ11_08765 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DNQ11_08765 PF00460 Flagella basal body rod protein DNQ11_08790 PF00460 Flagella basal body rod protein DNQ11_08795 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DNQ11_08795 PF00460 Flagella basal body rod protein DNQ11_08800 PF02049 Flagellar hook-basal body complex protein FliE DNQ11_08810 PF14841 FliG middle domain DNQ11_08810 PF14842 FliG N-terminal domain DNQ11_08810 PF01706 FliG C-terminal domain DNQ11_08820 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DNQ11_08820 PF02874 ATP synthase alpha/beta family, beta-barrel domain DNQ11_08820 PF18269 T3SS EscN ATPase C-terminal domain DNQ11_08845 PF07559 Flagellar basal body protein FlaE DNQ11_08845 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DNQ11_08845 PF00460 Flagella basal body rod protein DNQ11_08860 PF01584 CheW-like domain DNQ11_08860 PF00072 Response regulator receiver domain DNQ11_08865 PF12181 DNA binding domain of the motility gene repressor (MogR) DNQ11_08870 PF00535 Glycosyl transferase family 2 DNQ11_08910 PF13181 Tetratricopeptide repeat DNQ11_08910 PF00535 Glycosyl transferase family 2 DNQ11_08925 PF00700 Bacterial flagellin C-terminal helical region DNQ11_08925 PF00669 Bacterial flagellin N-terminal helical region DNQ11_08930 PF01464 Transglycosylase SLT domain DNQ11_08945 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DNQ11_08945 PF04509 CheC-like family DNQ11_08955 PF00813 FliP family DNQ11_08960 PF01313 Bacterial export proteins, family 3 DNQ11_08970 PF01312 FlhB HrpN YscU SpaS Family DNQ11_08975 PF00771 FHIPEP family DNQ11_08980 PF00448 SRP54-type protein, GTPase domain DNQ11_08985 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DNQ11_08985 PF00460 Flagella basal body rod protein DNQ11_08990 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DNQ11_08990 PF01411 tRNA synthetases class II (A) DNQ11_08990 PF02272 DHHA1 domain DNQ11_09015 PF17932 Tetracyclin repressor-like, C-terminal domain DNQ11_09015 PF00440 Bacterial regulatory proteins, tetR family DNQ11_09020 PF17329 Family of unknown function (DUF5367) DNQ11_09035 PF03992 Antibiotic biosynthesis monooxygenase DNQ11_09040 PF08141 Small acid-soluble spore protein H family DNQ11_09065 PF08402 TOBE domain DNQ11_09065 PF00005 ABC transporter DNQ11_09075 PF00528 Binding-protein-dependent transport system inner membrane component DNQ11_09080 PF00753 Metallo-beta-lactamase superfamily DNQ11_09080 PF12706 Beta-lactamase superfamily domain DNQ11_09090 PF10787 Uncharacterised protein from bacillus cereus group DNQ11_09110 PF00768 D-alanyl-D-alanine carboxypeptidase DNQ11_09110 PF07943 Penicillin-binding protein 5, C-terminal domain DNQ11_09120 PF00300 Histidine phosphatase superfamily (branch 1) DNQ11_09150 PF13537 Glutamine amidotransferase domain DNQ11_09150 PF00733 Asparagine synthase DNQ11_09170 PF01545 Cation efflux family DNQ11_09170 PF16916 Dimerisation domain of Zinc Transporter DNQ11_09180 PF00392 Bacterial regulatory proteins, gntR family DNQ11_09180 PF07729 FCD domain DNQ11_09185 PF00892 EamA-like transporter family DNQ11_09190 PF02492 CobW/HypB/UreG, nucleotide-binding domain DNQ11_09190 PF07683 Cobalamin synthesis protein cobW C-terminal domain DNQ11_09200 PF03773 Predicted permease DNQ11_09210 PF00535 Glycosyl transferase family 2 DNQ11_09215 PF03553 Na+/H+ antiporter family DNQ11_09220 PF00206 Lyase DNQ11_09220 PF10415 Fumarase C C-terminus DNQ11_09250 PF03575 Peptidase family S51 DNQ11_09270 PF02683 Cytochrome C biogenesis protein transmembrane region DNQ11_09275 PF00578 AhpC/TSA family DNQ11_09300 PF00291 Pyridoxal-phosphate dependent enzyme DNQ11_09305 PF04286 Protein of unknown function (DUF445) DNQ11_09335 PF00196 Bacterial regulatory proteins, luxR family DNQ11_09335 PF00072 Response regulator receiver domain DNQ11_09340 PF07730 Histidine kinase DNQ11_09340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_09340 PF13185 GAF domain DNQ11_09340 PF13492 GAF domain DNQ11_09345 PF00005 ABC transporter DNQ11_09360 PF13091 PLD-like domain DNQ11_09365 PF00696 Amino acid kinase family DNQ11_09370 PF00375 Sodium:dicarboxylate symporter family DNQ11_09375 PF00206 Lyase DNQ11_09375 PF10415 Fumarase C C-terminus DNQ11_09380 PF03949 Malic enzyme, NAD binding domain DNQ11_09380 PF00390 Malic enzyme, N-terminal domain DNQ11_09385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_09390 PF00072 Response regulator receiver domain DNQ11_09390 PF08664 YcbB domain DNQ11_09395 PF04434 SWIM zinc finger DNQ11_09395 PF00176 SNF2 family N-terminal domain DNQ11_09395 PF00271 Helicase conserved C-terminal domain DNQ11_09415 PF03590 Aspartate-ammonia ligase DNQ11_09435 PF00696 Amino acid kinase family DNQ11_09435 PF13840 ACT domain DNQ11_09450 PF13761 Domain of unknown function (DUF4166) DNQ11_09455 PF14158 YndJ-like protein DNQ11_09460 PF00293 NUDIX domain DNQ11_09465 PF00395 S-layer homology domain DNQ11_09465 PF02368 Bacterial Ig-like domain (group 2) DNQ11_09465 PF13205 Bacterial Ig-like domain DNQ11_09475 PF07690 Major Facilitator Superfamily DNQ11_09490 PF02554 Carbon starvation protein CstA DNQ11_09495 PF03976 Polyphosphate kinase 2 (PPK2) DNQ11_09510 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DNQ11_09510 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DNQ11_09520 PF16360 GTP-binding GTPase Middle Region DNQ11_09520 PF13167 GTP-binding GTPase N-terminal DNQ11_09520 PF01926 50S ribosome-binding GTPase DNQ11_09530 PF07690 Major Facilitator Superfamily DNQ11_09535 PF00291 Pyridoxal-phosphate dependent enzyme DNQ11_09550 PF01943 Polysaccharide biosynthesis protein DNQ11_09550 PF14667 Polysaccharide biosynthesis C-terminal domain DNQ11_09555 PF00209 Sodium:neurotransmitter symporter family DNQ11_09560 PF01522 Polysaccharide deacetylase DNQ11_09560 PF00457 Glycosyl hydrolases family 11 DNQ11_09560 PF03422 Carbohydrate binding module (family 6) DNQ11_09570 PF04239 Protein of unknown function (DUF421) DNQ11_09590 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DNQ11_09590 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DNQ11_09610 PF01625 Peptide methionine sulfoxide reductase DNQ11_09620 PF01063 Amino-transferase class IV DNQ11_09625 PF00205 Thiamine pyrophosphate enzyme, central domain DNQ11_09625 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DNQ11_09625 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DNQ11_09630 PF10369 Small subunit of acetolactate synthase DNQ11_09635 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DNQ11_09635 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DNQ11_09640 PF00920 Dehydratase family DNQ11_09645 PF00585 C-terminal regulatory domain of Threonine dehydratase DNQ11_09645 PF00291 Pyridoxal-phosphate dependent enzyme DNQ11_09655 PF09587 Bacterial capsule synthesis protein PGA_cap DNQ11_09670 PF07690 Major Facilitator Superfamily DNQ11_09675 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DNQ11_09685 PF00072 Response regulator receiver domain DNQ11_09685 PF04397 LytTr DNA-binding domain DNQ11_09690 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DNQ11_09690 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DNQ11_09705 PF01979 Amidohydrolase family DNQ11_09710 PF12146 Serine aminopeptidase, S33 DNQ11_09710 PF13026 Protein of unknown function (DUF3887) DNQ11_09715 PF00005 ABC transporter DNQ11_09720 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DNQ11_09755 PF13186 Iron-sulfur cluster-binding domain DNQ11_09755 PF04055 Radical SAM superfamily DNQ11_09760 PF13302 Acetyltransferase (GNAT) domain DNQ11_09765 PF00072 Response regulator receiver domain DNQ11_09765 PF00486 Transcriptional regulatory protein, C terminal DNQ11_09780 PF01566 Natural resistance-associated macrophage protein DNQ11_09795 PF02558 Ketopantoate reductase PanE/ApbA DNQ11_09795 PF08546 Ketopantoate reductase PanE/ApbA C terminal DNQ11_09815 PF05791 Bacillus haemolytic enterotoxin (HBL) DNQ11_09820 PF05791 Bacillus haemolytic enterotoxin (HBL) DNQ11_09830 PF04198 Putative sugar-binding domain DNQ11_09835 PF01791 DeoC/LacD family aldolase DNQ11_09840 PF07662 Na+ dependent nucleoside transporter C-terminus DNQ11_09840 PF01773 Na+ dependent nucleoside transporter N-terminus DNQ11_09845 PF02885 Glycosyl transferase family, helical bundle domain DNQ11_09845 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DNQ11_09845 PF00591 Glycosyl transferase family, a/b domain DNQ11_09850 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DNQ11_09860 PF05979 Bacterial protein of unknown function (DUF896) DNQ11_09880 PF00557 Metallopeptidase family M24 DNQ11_09880 PF05195 Aminopeptidase P, N-terminal domain DNQ11_09885 PF07732 Multicopper oxidase DNQ11_09885 PF07731 Multicopper oxidase DNQ11_09890 PF01551 Peptidase family M23 DNQ11_09915 PF02525 Flavodoxin-like fold DNQ11_09930 PF04234 CopC domain DNQ11_09930 PF05425 Copper resistance protein D DNQ11_09930 PF13115 YtkA-like DNQ11_09935 PF07987 Domain of unkown function (DUF1775) DNQ11_09945 PF00892 EamA-like transporter family DNQ11_09950 PF03466 LysR substrate binding domain DNQ11_09950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNQ11_09955 PF02082 Transcriptional regulator DNQ11_09960 PF01323 DSBA-like thioredoxin domain DNQ11_09965 PF00881 Nitroreductase family DNQ11_09975 PF01425 Amidase DNQ11_09980 PF01594 AI-2E family transporter DNQ11_09985 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DNQ11_09985 PF00056 lactate/malate dehydrogenase, NAD binding domain DNQ11_09990 PF01593 Flavin containing amine oxidoreductase DNQ11_09995 PF02492 CobW/HypB/UreG, nucleotide-binding domain DNQ11_09995 PF07683 Cobalamin synthesis protein cobW C-terminal domain DNQ11_10010 PF00501 AMP-binding enzyme DNQ11_10010 PF13193 AMP-binding enzyme C-terminal domain DNQ11_10015 PF01575 MaoC like domain DNQ11_10020 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DNQ11_10020 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DNQ11_10035 PF12399 Branched-chain amino acid ATP-binding cassette transporter DNQ11_10035 PF00005 ABC transporter DNQ11_10040 PF00005 ABC transporter DNQ11_10045 PF02653 Branched-chain amino acid transport system / permease component DNQ11_10055 PF03466 LysR substrate binding domain DNQ11_10055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNQ11_10075 PF01047 MarR family DNQ11_10085 PF01654 Cytochrome bd terminal oxidase subunit I DNQ11_10090 PF02322 Cytochrome bd terminal oxidase subunit II DNQ11_10095 PF00005 ABC transporter DNQ11_10095 PF00664 ABC transporter transmembrane region DNQ11_10100 PF00664 ABC transporter transmembrane region DNQ11_10100 PF00005 ABC transporter DNQ11_10115 PF17676 LD-carboxypeptidase C-terminal domain DNQ11_10115 PF02016 LD-carboxypeptidase N-terminal domain DNQ11_10120 PF07943 Penicillin-binding protein 5, C-terminal domain DNQ11_10120 PF00768 D-alanyl-D-alanine carboxypeptidase DNQ11_10135 PF00877 NlpC/P60 family DNQ11_10135 PF01476 LysM domain DNQ11_10150 PF00072 Response regulator receiver domain DNQ11_10150 PF00486 Transcriptional regulatory protein, C terminal DNQ11_10155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_10155 PF00512 His Kinase A (phospho-acceptor) domain DNQ11_10155 PF00989 PAS fold DNQ11_10155 PF16736 Single Cache-like DNQ11_10165 PF00106 short chain dehydrogenase DNQ11_10175 PF04439 Streptomycin adenylyltransferase DNQ11_10180 PF01522 Polysaccharide deacetylase DNQ11_10180 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain DNQ11_10205 PF01842 ACT domain DNQ11_10205 PF00742 Homoserine dehydrogenase DNQ11_10205 PF03447 Homoserine dehydrogenase, NAD binding domain DNQ11_10210 PF00291 Pyridoxal-phosphate dependent enzyme DNQ11_10215 PF08544 GHMP kinases C terminal DNQ11_10215 PF00288 GHMP kinases N terminal domain DNQ11_10230 PF03816 Cell envelope-related transcriptional attenuator domain DNQ11_10240 PF00072 Response regulator receiver domain DNQ11_10240 PF00486 Transcriptional regulatory protein, C terminal DNQ11_10245 PF00512 His Kinase A (phospho-acceptor) domain DNQ11_10245 PF16736 Single Cache-like DNQ11_10245 PF00989 PAS fold DNQ11_10245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_10250 PF01522 Polysaccharide deacetylase DNQ11_10260 PF02308 MgtC family DNQ11_10265 PF00583 Acetyltransferase (GNAT) family DNQ11_10270 PF06276 Ferric iron reductase FhuF-like transporter DNQ11_10270 PF04183 IucA / IucC family DNQ11_10275 PF06276 Ferric iron reductase FhuF-like transporter DNQ11_10275 PF04183 IucA / IucC family DNQ11_10280 PF13193 AMP-binding enzyme C-terminal domain DNQ11_10280 PF00501 AMP-binding enzyme DNQ11_10295 PF01261 Xylose isomerase-like TIM barrel DNQ11_10300 PF00269 Small, acid-soluble spore proteins, alpha/beta type DNQ11_10310 PF01810 LysE type translocator DNQ11_10325 PF01734 Patatin-like phospholipase DNQ11_10350 PF00293 NUDIX domain DNQ11_10350 PF13344 Haloacid dehalogenase-like hydrolase DNQ11_10355 PF02540 NAD synthase DNQ11_10365 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DNQ11_10365 PF18277 AbrB C-terminal domain DNQ11_10370 PF00082 Subtilase family DNQ11_10375 PF01022 Bacterial regulatory protein, arsR family DNQ11_10380 PF00248 Aldo/keto reductase family DNQ11_10390 PF07690 Major Facilitator Superfamily DNQ11_10410 PF03193 RsgA GTPase DNQ11_10415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DNQ11_10415 PF02743 Cache domain DNQ11_10415 PF00672 HAMP domain DNQ11_10440 PF00210 Ferritin-like domain DNQ11_10455 PF00296 Luciferase-like monooxygenase DNQ11_10465 PF01593 Flavin containing amine oxidoreductase DNQ11_10475 PF00248 Aldo/keto reductase family DNQ11_10480 PF02492 CobW/HypB/UreG, nucleotide-binding domain DNQ11_10480 PF07683 Cobalamin synthesis protein cobW C-terminal domain DNQ11_10485 PF00583 Acetyltransferase (GNAT) family DNQ11_10565 PF01297 Zinc-uptake complex component A periplasmic DNQ11_10565 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment DNQ11_10575 PF13460 NAD(P)H-binding DNQ11_10580 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DNQ11_10585 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DNQ11_10585 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DNQ11_10595 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DNQ11_10600 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DNQ11_10610 PF00300 Histidine phosphatase superfamily (branch 1) DNQ11_10620 PF08757 CotH kinase protein DNQ11_10625 PF00293 NUDIX domain DNQ11_10630 PF09335 SNARE associated Golgi protein DNQ11_10635 PF14667 Polysaccharide biosynthesis C-terminal domain DNQ11_10635 PF01943 Polysaccharide biosynthesis protein DNQ11_10645 PF03773 Predicted permease DNQ11_10650 PF09323 Domain of unknown function (DUF1980) DNQ11_10655 PF03061 Thioesterase superfamily DNQ11_10665 PF13091 PLD-like domain DNQ11_10665 PF13396 Phospholipase_D-nuclease N-terminal DNQ11_10680 PF13460 NAD(P)H-binding DNQ11_10685 PF04306 Protein of unknown function (DUF456) DNQ11_10690 PF01595 Cyclin M transmembrane N-terminal domain DNQ11_10690 PF00571 CBS domain DNQ11_10690 PF03471 Transporter associated domain DNQ11_10705 PF05525 Branched-chain amino acid transport protein DNQ11_10710 PF01588 Putative tRNA binding domain DNQ11_10730 PF07454 Stage II sporulation protein P (SpoIIP) DNQ11_10740 PF02557 D-alanyl-D-alanine carboxypeptidase DNQ11_10750 PF01425 Amidase DNQ11_10755 PF07690 Major Facilitator Superfamily DNQ11_10765 PF01145 SPFH domain / Band 7 family DNQ11_10770 PF00300 Histidine phosphatase superfamily (branch 1) DNQ11_10785 PF01168 Alanine racemase, N-terminal domain DNQ11_10785 PF00842 Alanine racemase, C-terminal domain DNQ11_10805 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase DNQ11_10810 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DNQ11_10810 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DNQ11_10815 PF00155 Aminotransferase class I and II DNQ11_10815 PF00392 Bacterial regulatory proteins, gntR family DNQ11_10845 PF00583 Acetyltransferase (GNAT) family DNQ11_10905 PF09579 Sporulation protein YtfJ (Spore_YtfJ) DNQ11_10930 PF01209 ubiE/COQ5 methyltransferase family DNQ11_10935 PF01268 Formate--tetrahydrofolate ligase DNQ11_10945 PF00271 Helicase conserved C-terminal domain DNQ11_10945 PF00270 DEAD/DEAH box helicase DNQ11_10950 PF01261 Xylose isomerase-like TIM barrel DNQ11_10955 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DNQ11_10965 PF08240 Alcohol dehydrogenase GroES-like domain DNQ11_10965 PF00107 Zinc-binding dehydrogenase DNQ11_10970 PF08281 Sigma-70, region 4 DNQ11_10970 PF04542 Sigma-70 region 2 DNQ11_10995 PF00255 Glutathione peroxidase DNQ11_11000 PF11992 Domain of unknown function (DUF3488) DNQ11_11000 PF13559 Domain of unknown function (DUF4129) DNQ11_11000 PF01841 Transglutaminase-like superfamily DNQ11_11005 PF01882 Protein of unknown function DUF58 DNQ11_11010 PF07726 ATPase family associated with various cellular activities (AAA) DNQ11_11010 PF17863 AAA lid domain DNQ11_11025 PF01568 Molydopterin dinucleotide binding domain DNQ11_11025 PF14710 Respiratory nitrate reductase alpha N-terminal DNQ11_11025 PF00384 Molybdopterin oxidoreductase DNQ11_11030 PF14711 Respiratory nitrate reductase beta C-terminal DNQ11_11030 PF13247 4Fe-4S dicluster domain DNQ11_11035 PF02613 Nitrate reductase delta subunit DNQ11_11040 PF02665 Nitrate reductase gamma subunit DNQ11_11045 PF00155 Aminotransferase class I and II DNQ11_11045 PF00392 Bacterial regulatory proteins, gntR family DNQ11_11050 PF00005 ABC transporter DNQ11_11060 PF00027 Cyclic nucleotide-binding domain DNQ11_11060 PF00325 Bacterial regulatory proteins, crp family DNQ11_11065 PF06463 Molybdenum Cofactor Synthesis C DNQ11_11065 PF04055 Radical SAM superfamily DNQ11_11070 PF00899 ThiF family DNQ11_11075 PF03453 MoeA N-terminal region (domain I and II) DNQ11_11075 PF03454 MoeA C-terminal region (domain IV) DNQ11_11075 PF00994 Probable molybdopterin binding domain DNQ11_11080 PF02391 MoaE protein DNQ11_11090 PF07690 Major Facilitator Superfamily DNQ11_11115 PF01903 CbiX DNQ11_11120 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DNQ11_11125 PF00355 Rieske [2Fe-2S] domain DNQ11_11130 PF04324 BFD-like [2Fe-2S] binding domain DNQ11_11130 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DNQ11_11130 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DNQ11_11130 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNQ11_11130 PF18267 Rubredoxin NAD+ reductase C-terminal domain DNQ11_11135 PF01814 Hemerythrin HHE cation binding domain DNQ11_11135 PF04405 Domain of Unknown function (DUF542) DNQ11_11170 PF04232 Stage V sporulation protein S (SpoVS) DNQ11_11190 PF01510 N-acetylmuramoyl-L-alanine amidase DNQ11_11205 PF01966 HD domain DNQ11_11210 PF00005 ABC transporter DNQ11_11210 PF12848 ABC transporter DNQ11_11210 PF16326 ABC transporter C-terminal domain DNQ11_11225 PF00436 Single-strand binding protein family DNQ11_11230 PF00440 Bacterial regulatory proteins, tetR family DNQ11_11240 PF13769 Virulence factor DNQ11_11240 PF08712 Scaffold protein Nfu/NifU N terminal DNQ11_11250 PF06491 Disulphide isomerase DNQ11_11255 PF04445 Putative SAM-dependent methyltransferase DNQ11_11260 PF03485 Arginyl tRNA synthetase N terminal domain DNQ11_11260 PF00750 tRNA synthetases class I (R) DNQ11_11260 PF05746 DALR anticodon binding domain DNQ11_11285 PF00133 tRNA synthetases class I (I, L, M and V) DNQ11_11285 PF08264 Anticodon-binding domain of tRNA DNQ11_11305 PF01225 Mur ligase family, catalytic domain DNQ11_11305 PF08245 Mur ligase middle domain DNQ11_11305 PF02875 Mur ligase family, glutamate ligase domain DNQ11_11310 PF01336 OB-fold nucleic acid binding domain DNQ11_11310 PF00152 tRNA synthetases class II (D, K and N) DNQ11_11330 PF01580 FtsK/SpoIIIE family DNQ11_11330 PF12538 DNA transporter DNQ11_11425 PF02595 Glycerate kinase family DNQ11_11430 PF00939 Sodium:sulfate symporter transmembrane region DNQ11_11435 PF00072 Response regulator receiver domain DNQ11_11435 PF00486 Transcriptional regulatory protein, C terminal DNQ11_11440 PF00672 HAMP domain DNQ11_11440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_11440 PF00512 His Kinase A (phospho-acceptor) domain DNQ11_11455 PF00209 Sodium:neurotransmitter symporter family DNQ11_11470 PF10997 Alternate to MurJ DNQ11_11475 PF13419 Haloacid dehalogenase-like hydrolase DNQ11_11485 PF00465 Iron-containing alcohol dehydrogenase DNQ11_11490 PF01177 Asp/Glu/Hydantoin racemase DNQ11_11495 PF01980 tRNA-methyltransferase O DNQ11_11500 PF00583 Acetyltransferase (GNAT) family DNQ11_11515 PF00005 ABC transporter DNQ11_11525 PF14005 YpjP-like protein DNQ11_11530 PF13419 Haloacid dehalogenase-like hydrolase DNQ11_11550 PF00144 Beta-lactamase DNQ11_11550 PF07930 D-aminopeptidase, domain B DNQ11_11555 PF00303 Thymidylate synthase DNQ11_11560 PF00186 Dihydrofolate reductase DNQ11_11565 PF00905 Penicillin binding protein transpeptidase domain DNQ11_11565 PF03717 Penicillin-binding Protein dimerisation domain DNQ11_11565 PF05223 NTF2-like N-terminal transpeptidase domain DNQ11_11570 PF02525 Flavodoxin-like fold DNQ11_11575 PF01553 Acyltransferase DNQ11_11580 PF03006 Haemolysin-III related DNQ11_11585 PF02416 mttA/Hcf106 family DNQ11_11590 PF00902 Sec-independent protein translocase protein (TatC) DNQ11_11605 PF02645 Uncharacterised protein, DegV family COG1307 DNQ11_11615 PF02630 SCO1/SenC DNQ11_11620 PF00011 Hsp20/alpha crystallin family DNQ11_11625 PF00733 Asparagine synthase DNQ11_11625 PF13537 Glutamine amidotransferase domain DNQ11_11645 PF01497 Periplasmic binding protein DNQ11_11650 PF01063 Amino-transferase class IV DNQ11_11655 PF00881 Nitroreductase family DNQ11_11675 PF00293 NUDIX domain DNQ11_11680 PF00011 Hsp20/alpha crystallin family DNQ11_11685 PF00924 Mechanosensitive ion channel DNQ11_11690 PF07730 Histidine kinase DNQ11_11690 PF13185 GAF domain DNQ11_11695 PF00196 Bacterial regulatory proteins, luxR family DNQ11_11695 PF00072 Response regulator receiver domain DNQ11_11705 PF00107 Zinc-binding dehydrogenase DNQ11_11705 PF08240 Alcohol dehydrogenase GroES-like domain DNQ11_11730 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DNQ11_11730 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DNQ11_11735 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DNQ11_11735 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DNQ11_11750 PF03358 NADPH-dependent FMN reductase DNQ11_11765 PF00571 CBS domain DNQ11_11765 PF00005 ABC transporter DNQ11_11770 PF00528 Binding-protein-dependent transport system inner membrane component DNQ11_11775 PF13520 Amino acid permease DNQ11_11805 PF00571 CBS domain DNQ11_11805 PF01595 Cyclin M transmembrane N-terminal domain DNQ11_11805 PF03471 Transporter associated domain DNQ11_11810 PF00171 Aldehyde dehydrogenase family DNQ11_11815 PF07997 Protein of unknown function (DUF1694) DNQ11_11820 PF09385 Histidine kinase N terminal DNQ11_11835 PF00202 Aminotransferase class-III DNQ11_11840 PF01144 Coenzyme A transferase DNQ11_11845 PF01144 Coenzyme A transferase DNQ11_11850 PF01546 Peptidase family M20/M25/M40 DNQ11_11850 PF07687 Peptidase dimerisation domain DNQ11_11855 PF00583 Acetyltransferase (GNAT) family DNQ11_11860 PF13426 PAS domain DNQ11_11860 PF02954 Bacterial regulatory protein, Fis family DNQ11_11860 PF00158 Sigma-54 interaction domain DNQ11_11870 PF12544 Lysine-2,3-aminomutase DNQ11_11875 PF14122 YokU-like protein, putative antitoxin DNQ11_11880 PF06855 YozE SAM-like fold DNQ11_11895 PF14162 YozD-like protein DNQ11_11910 PF07070 SpoOM protein DNQ11_11915 PF01569 PAP2 superfamily DNQ11_11920 PF16916 Dimerisation domain of Zinc Transporter DNQ11_11920 PF01545 Cation efflux family DNQ11_11925 PF00085 Thioredoxin DNQ11_11940 PF04740 LXG domain of WXG superfamily DNQ11_11940 PF14436 Bacterial EndoU nuclease DNQ11_11945 PF00150 Cellulase (glycosyl hydrolase family 5) DNQ11_11945 PF03424 Carbohydrate binding domain (family 17/28) DNQ11_11945 PF00395 S-layer homology domain DNQ11_11955 PF04471 Restriction endonuclease DNQ11_12090 PF10676 Spore germination protein gerPA/gerPF DNQ11_12110 PF00905 Penicillin binding protein transpeptidase domain DNQ11_12110 PF00912 Transglycosylase DNQ11_12115 PF07690 Major Facilitator Superfamily DNQ11_12120 PF01521 Iron-sulphur cluster biosynthesis DNQ11_12125 PF00285 Citrate synthase, C-terminal domain DNQ11_12130 PF03972 MmgE/PrpD family DNQ11_12140 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DNQ11_12140 PF02770 Acyl-CoA dehydrogenase, middle domain DNQ11_12140 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DNQ11_12145 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DNQ11_12145 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DNQ11_12150 PF00171 Aldehyde dehydrogenase family DNQ11_12155 PF01810 LysE type translocator DNQ11_12160 PF00378 Enoyl-CoA hydratase/isomerase DNQ11_12170 PF10763 Protein of unknown function (DUF2584) DNQ11_12175 PF00149 Calcineurin-like phosphoesterase DNQ11_12175 PF12320 Type 5 capsule protein repressor C-terminal domain DNQ11_12180 PF13476 AAA domain DNQ11_12195 PF01022 Bacterial regulatory protein, arsR family DNQ11_12215 PF07690 Major Facilitator Superfamily DNQ11_12225 PF00106 short chain dehydrogenase DNQ11_12230 PF00425 chorismate binding enzyme DNQ11_12235 PF00501 AMP-binding enzyme DNQ11_12235 PF13193 AMP-binding enzyme C-terminal domain DNQ11_12240 PF00857 Isochorismatase family DNQ11_12240 PF00550 Phosphopantetheine attachment site DNQ11_12245 PF00975 Thioesterase domain DNQ11_12245 PF00501 AMP-binding enzyme DNQ11_12245 PF13193 AMP-binding enzyme C-terminal domain DNQ11_12245 PF00668 Condensation domain DNQ11_12245 PF00550 Phosphopantetheine attachment site DNQ11_12250 PF03621 MbtH-like protein DNQ11_12255 PF07690 Major Facilitator Superfamily DNQ11_12270 PF00216 Bacterial DNA-binding protein DNQ11_12280 PF05163 DinB family DNQ11_12285 PF00082 Subtilase family DNQ11_12290 PF01235 Sodium:alanine symporter family DNQ11_12305 PF16291 Domain of unknown function (DUF4937 DNQ11_12310 PF01479 S4 domain DNQ11_12310 PF00849 RNA pseudouridylate synthase DNQ11_12315 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DNQ11_12315 PF02824 TGS domain DNQ11_12315 PF03129 Anticodon binding domain DNQ11_12315 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DNQ11_12335 PF12146 Serine aminopeptidase, S33 DNQ11_12340 PF07690 Major Facilitator Superfamily DNQ11_12360 PF13649 Methyltransferase domain DNQ11_12405 PF16123 Hydroxyacylglutathione hydrolase C-terminus DNQ11_12405 PF00753 Metallo-beta-lactamase superfamily DNQ11_12415 PF03176 MMPL family DNQ11_12425 PF00302 Chloramphenicol acetyltransferase DNQ11_12440 PF00583 Acetyltransferase (GNAT) family DNQ11_12480 PF13302 Acetyltransferase (GNAT) domain DNQ11_12490 PF00313 'Cold-shock' DNA-binding domain DNQ11_12560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNQ11_12560 PF03466 LysR substrate binding domain DNQ11_12565 PF01118 Semialdehyde dehydrogenase, NAD binding domain DNQ11_12565 PF02774 Semialdehyde dehydrogenase, dimerisation domain DNQ11_12580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNQ11_12580 PF03466 LysR substrate binding domain DNQ11_12585 PF03473 MOSC domain DNQ11_12585 PF03475 3-alpha domain DNQ11_12600 PF00664 ABC transporter transmembrane region DNQ11_12600 PF00005 ABC transporter DNQ11_12605 PF00005 ABC transporter DNQ11_12605 PF00664 ABC transporter transmembrane region DNQ11_12620 PF01810 LysE type translocator DNQ11_12625 PF07883 Cupin domain DNQ11_12625 PF01381 Helix-turn-helix DNQ11_12650 PF00890 FAD binding domain DNQ11_12655 PF04542 Sigma-70 region 2 DNQ11_12655 PF12680 SnoaL-like domain DNQ11_12655 PF08281 Sigma-70, region 4 DNQ11_12685 PF02638 Glycosyl hydrolase-like 10 DNQ11_12700 PF02378 Phosphotransferase system, EIIC DNQ11_12710 PF03702 Anhydro-N-acetylmuramic acid kinase DNQ11_12715 PF01869 BadF/BadG/BcrA/BcrD ATPase family DNQ11_12720 PF02660 Glycerol-3-phosphate acyltransferase DNQ11_12725 PF00266 Aminotransferase class-V DNQ11_12730 PF00291 Pyridoxal-phosphate dependent enzyme DNQ11_12755 PF16123 Hydroxyacylglutathione hydrolase C-terminus DNQ11_12755 PF00753 Metallo-beta-lactamase superfamily DNQ11_12770 PF00270 DEAD/DEAH box helicase DNQ11_12770 PF00271 Helicase conserved C-terminal domain DNQ11_12785 PF17932 Tetracyclin repressor-like, C-terminal domain DNQ11_12785 PF00440 Bacterial regulatory proteins, tetR family DNQ11_12800 PF02687 FtsX-like permease family DNQ11_12800 PF12704 MacB-like periplasmic core domain DNQ11_12800 PF00005 ABC transporter DNQ11_12805 PF09313 Domain of unknown function (DUF1971) DNQ11_12805 PF03848 Tellurite resistance protein TehB DNQ11_12815 PF08241 Methyltransferase domain DNQ11_12820 PF00205 Thiamine pyrophosphate enzyme, central domain DNQ11_12820 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DNQ11_12820 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DNQ11_12825 PF12802 MarR family DNQ11_12830 PF00300 Histidine phosphatase superfamily (branch 1) DNQ11_12840 PF14171 Toxin SpoIISA, type II toxin-antitoxin system DNQ11_12875 PF01546 Peptidase family M20/M25/M40 DNQ11_12875 PF07687 Peptidase dimerisation domain DNQ11_12895 PF04542 Sigma-70 region 2 DNQ11_12895 PF08281 Sigma-70, region 4 DNQ11_12905 PF03717 Penicillin-binding Protein dimerisation domain DNQ11_12905 PF00905 Penicillin binding protein transpeptidase domain DNQ11_12920 PF01569 PAP2 superfamily DNQ11_12925 PF00356 Bacterial regulatory proteins, lacI family DNQ11_12930 PF07690 Major Facilitator Superfamily DNQ11_12935 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DNQ11_12935 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DNQ11_12940 PF00294 pfkB family carbohydrate kinase DNQ11_12945 PF00171 Aldehyde dehydrogenase family DNQ11_12950 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DNQ11_12950 PF00205 Thiamine pyrophosphate enzyme, central domain DNQ11_12950 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DNQ11_12955 PF01261 Xylose isomerase-like TIM barrel DNQ11_12960 PF01116 Fructose-bisphosphate aldolase class-II DNQ11_12965 PF04962 KduI/IolB family DNQ11_12990 PF18801 response regulator aspartate phosphatase H, N terminal DNQ11_12995 PF01381 Helix-turn-helix DNQ11_13010 PF02557 D-alanyl-D-alanine carboxypeptidase DNQ11_13020 PF01520 N-acetylmuramoyl-L-alanine amidase DNQ11_13020 PF00395 S-layer homology domain DNQ11_13030 PF00440 Bacterial regulatory proteins, tetR family DNQ11_13045 PF00990 Diguanylate cyclase, GGDEF domain DNQ11_13045 PF03707 Bacterial signalling protein N terminal repeat DNQ11_13045 PF00563 EAL domain DNQ11_13050 PF13302 Acetyltransferase (GNAT) domain DNQ11_13065 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNQ11_13070 PF00581 Rhodanese-like domain DNQ11_13085 PF00005 ABC transporter DNQ11_13095 PF00440 Bacterial regulatory proteins, tetR family DNQ11_13095 PF08359 YsiA-like protein, C-terminal region DNQ11_13115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DNQ11_13115 PF02770 Acyl-CoA dehydrogenase, middle domain DNQ11_13115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DNQ11_13120 PF02785 Biotin carboxylase C-terminal domain DNQ11_13120 PF00289 Biotin carboxylase, N-terminal domain DNQ11_13120 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DNQ11_13125 PF00364 Biotin-requiring enzyme DNQ11_13130 PF00682 HMGL-like DNQ11_13135 PF00378 Enoyl-CoA hydratase/isomerase DNQ11_13140 PF01039 Carboxyl transferase domain DNQ11_13145 PF00501 AMP-binding enzyme DNQ11_13145 PF16177 Acetyl-coenzyme A synthetase N-terminus DNQ11_13145 PF13193 AMP-binding enzyme C-terminal domain DNQ11_13155 PF00583 Acetyltransferase (GNAT) family DNQ11_13160 PF00485 Phosphoribulokinase / Uridine kinase family DNQ11_13170 PF05163 DinB family DNQ11_13175 PF00768 D-alanyl-D-alanine carboxypeptidase DNQ11_13175 PF07943 Penicillin-binding protein 5, C-terminal domain DNQ11_13180 PF00512 His Kinase A (phospho-acceptor) domain DNQ11_13180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_13185 PF00486 Transcriptional regulatory protein, C terminal DNQ11_13185 PF00072 Response regulator receiver domain DNQ11_13190 PF01966 HD domain DNQ11_13195 PF13021 Domain of unknown function (DUF3885) DNQ11_13200 PF01048 Phosphorylase superfamily DNQ11_13240 PF17755 UvrA DNA-binding domain DNQ11_13240 PF17755 UvrA DNA-binding domain DNQ11_13240 PF17760 UvrA interaction domain DNQ11_13240 PF17760 UvrA interaction domain DNQ11_13255 PF00144 Beta-lactamase DNQ11_13260 PF09278 MerR, DNA binding DNQ11_13260 PF00376 MerR family regulatory protein DNQ11_13265 PF07690 Major Facilitator Superfamily DNQ11_13285 PF01636 Phosphotransferase enzyme family DNQ11_13290 PF12833 Helix-turn-helix domain DNQ11_13305 PF00155 Aminotransferase class I and II DNQ11_13305 PF00392 Bacterial regulatory proteins, gntR family DNQ11_13320 PF00107 Zinc-binding dehydrogenase DNQ11_13320 PF08240 Alcohol dehydrogenase GroES-like domain DNQ11_13350 PF07486 Cell Wall Hydrolase DNQ11_13365 PF00072 Response regulator receiver domain DNQ11_13365 PF00486 Transcriptional regulatory protein, C terminal DNQ11_13395 PF00005 ABC transporter DNQ11_13420 PF03447 Homoserine dehydrogenase, NAD binding domain DNQ11_13420 PF01842 ACT domain DNQ11_13420 PF00742 Homoserine dehydrogenase DNQ11_13425 PF00392 Bacterial regulatory proteins, gntR family DNQ11_13425 PF00155 Aminotransferase class I and II DNQ11_13430 PF01820 D-ala D-ala ligase N-terminus DNQ11_13430 PF07478 D-ala D-ala ligase C-terminus DNQ11_13435 PF03070 TENA/THI-4/PQQC family DNQ11_13530 PF00067 Cytochrome P450 DNQ11_13540 PF00132 Bacterial transferase hexapeptide (six repeats) DNQ11_13545 PF07561 Domain of Unknown Function (DUF1540) DNQ11_13555 PF00067 Cytochrome P450 DNQ11_13575 PF13188 PAS domain DNQ11_13575 PF00512 His Kinase A (phospho-acceptor) domain DNQ11_13575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_13575 PF00989 PAS fold DNQ11_13575 PF13426 PAS domain DNQ11_13585 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase DNQ11_13590 PF01177 Asp/Glu/Hydantoin racemase DNQ11_13595 PF07155 ECF-type riboflavin transporter, S component DNQ11_13600 PF12558 ATP-binding cassette cobalt transporter DNQ11_13600 PF00005 ABC transporter DNQ11_13615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_13615 PF00512 His Kinase A (phospho-acceptor) domain DNQ11_13630 PF08240 Alcohol dehydrogenase GroES-like domain DNQ11_13630 PF00107 Zinc-binding dehydrogenase DNQ11_13645 PF00144 Beta-lactamase DNQ11_13645 PF11954 Domain of unknown function (DUF3471) DNQ11_13680 PF01965 DJ-1/PfpI family DNQ11_13700 PF00144 Beta-lactamase DNQ11_13720 PF07690 Major Facilitator Superfamily DNQ11_13740 PF03009 Glycerophosphoryl diester phosphodiesterase family DNQ11_13760 PF00892 EamA-like transporter family DNQ11_13765 PF01270 Glycosyl hydrolases family 8 DNQ11_13780 PF00293 NUDIX domain DNQ11_13800 PF07690 Major Facilitator Superfamily DNQ11_13815 PF09297 NADH pyrophosphatase zinc ribbon domain DNQ11_13815 PF00293 NUDIX domain DNQ11_13820 PF00712 DNA polymerase III beta subunit, N-terminal domain DNQ11_13820 PF02768 DNA polymerase III beta subunit, C-terminal domain DNQ11_13820 PF02767 DNA polymerase III beta subunit, central domain DNQ11_13825 PF00293 NUDIX domain DNQ11_13840 PF12706 Beta-lactamase superfamily domain DNQ11_13860 PF09234 Domain of unknown function (DUF1963) DNQ11_13895 PF08000 Bacterial PH domain DNQ11_13905 PF12867 DinB superfamily DNQ11_13920 PF02673 Bacitracin resistance protein BacA DNQ11_13930 PF01541 GIY-YIG catalytic domain DNQ11_13975 PF01266 FAD dependent oxidoreductase DNQ11_14000 PF13419 Haloacid dehalogenase-like hydrolase DNQ11_14020 PF00282 Pyridoxal-dependent decarboxylase conserved domain DNQ11_14025 PF00668 Condensation domain DNQ11_14025 PF00550 Phosphopantetheine attachment site DNQ11_14025 PF00501 AMP-binding enzyme DNQ11_14025 PF13193 AMP-binding enzyme C-terminal domain DNQ11_14035 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DNQ11_14035 PF03714 Bacterial pullanase-associated domain DNQ11_14035 PF00128 Alpha amylase, catalytic domain DNQ11_14040 PF03413 Peptidase propeptide and YPEB domain DNQ11_14040 PF07504 Fungalysin/Thermolysin Propeptide Motif DNQ11_14040 PF01447 Thermolysin metallopeptidase, catalytic domain DNQ11_14040 PF02868 Thermolysin metallopeptidase, alpha-helical domain DNQ11_14060 PF00344 SecY translocase DNQ11_14065 PF11638 DnaA N-terminal domain DNQ11_14065 PF08299 Bacterial dnaA protein helix-turn-helix DNQ11_14065 PF00308 Bacterial dnaA protein DNQ11_14070 PF00892 EamA-like transporter family DNQ11_14075 PF00155 Aminotransferase class I and II DNQ11_14075 PF00392 Bacterial regulatory proteins, gntR family DNQ11_14080 PF00561 alpha/beta hydrolase fold DNQ11_14105 PF06081 Aromatic acid exporter family member 1 DNQ11_14120 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) DNQ11_14125 PF03413 Peptidase propeptide and YPEB domain DNQ11_14125 PF14620 YpeB sporulation DNQ11_14130 PF01471 Putative peptidoglycan binding domain DNQ11_14130 PF07486 Cell Wall Hydrolase DNQ11_14145 PF03301 Tryptophan 2,3-dioxygenase DNQ11_14150 PF04199 Putative cyclase DNQ11_14155 PF00266 Aminotransferase class-V DNQ11_14160 PF00440 Bacterial regulatory proteins, tetR family DNQ11_14160 PF08359 YsiA-like protein, C-terminal region DNQ11_14165 PF00293 NUDIX domain DNQ11_14165 PF13344 Haloacid dehalogenase-like hydrolase DNQ11_14195 PF00158 Sigma-54 interaction domain DNQ11_14195 PF02954 Bacterial regulatory protein, Fis family DNQ11_14195 PF01590 GAF domain DNQ11_14210 PF13302 Acetyltransferase (GNAT) domain DNQ11_14215 PF08220 DeoR-like helix-turn-helix domain DNQ11_14215 PF00455 DeoR C terminal sensor domain DNQ11_14230 PF00403 Heavy-metal-associated domain DNQ11_14230 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNQ11_14230 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DNQ11_14235 PF02082 Transcriptional regulator DNQ11_14255 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DNQ11_14255 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNQ11_14260 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DNQ11_14260 PF02817 e3 binding domain DNQ11_14260 PF00364 Biotin-requiring enzyme DNQ11_14265 PF02780 Transketolase, C-terminal domain DNQ11_14265 PF02779 Transketolase, pyrimidine binding domain DNQ11_14270 PF00676 Dehydrogenase E1 component DNQ11_14280 PF00106 short chain dehydrogenase DNQ11_14285 PF13673 Acetyltransferase (GNAT) domain DNQ11_14285 PF04229 GrpB protein DNQ11_14320 PF00528 Binding-protein-dependent transport system inner membrane component DNQ11_14325 PF00571 CBS domain DNQ11_14325 PF00005 ABC transporter DNQ11_14330 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DNQ11_14335 PF00574 Clp protease DNQ11_14350 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DNQ11_14355 PF13673 Acetyltransferase (GNAT) domain DNQ11_14360 PF18416 N-acetylglucosamine binding protein domain 2 DNQ11_14360 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading DNQ11_14375 PF10990 Protein of unknown function (DUF2809) DNQ11_14405 PF13567 Domain of unknown function (DUF4131) DNQ11_14405 PF03772 Competence protein DNQ11_14405 PF00753 Metallo-beta-lactamase superfamily DNQ11_14455 PF13538 UvrD-like helicase C-terminal domain DNQ11_14470 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like DNQ11_14475 PF00270 DEAD/DEAH box helicase DNQ11_14475 PF00271 Helicase conserved C-terminal domain DNQ11_14475 PF00570 HRDC domain DNQ11_14475 PF16124 RecQ zinc-binding DNQ11_14475 PF09382 RQC domain DNQ11_14525 PF02833 DHHA2 domain DNQ11_14525 PF01368 DHH family DNQ11_14530 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading DNQ11_14530 PF18416 N-acetylglucosamine binding protein domain 2 DNQ11_14545 PF02627 Carboxymuconolactone decarboxylase family DNQ11_14550 PF01235 Sodium:alanine symporter family DNQ11_14555 PF00171 Aldehyde dehydrogenase family DNQ11_14560 PF00701 Dihydrodipicolinate synthetase family DNQ11_14565 PF05544 Proline racemase DNQ11_14570 PF05544 Proline racemase DNQ11_14575 PF01266 FAD dependent oxidoreductase DNQ11_14580 PF00158 Sigma-54 interaction domain DNQ11_14580 PF13188 PAS domain DNQ11_14580 PF02954 Bacterial regulatory protein, Fis family DNQ11_14595 PF04324 BFD-like [2Fe-2S] binding domain DNQ11_14595 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNQ11_14610 PF08876 Domain of unknown function (DUF1836) DNQ11_14615 PF09335 SNARE associated Golgi protein DNQ11_14630 PF04914 DltD protein DNQ11_14635 PF00958 GMP synthase C terminal domain DNQ11_14635 PF13302 Acetyltransferase (GNAT) domain DNQ11_14635 PF03352 Methyladenine glycosylase DNQ11_14635 PF00117 Glutamine amidotransferase class-I DNQ11_14635 PF13673 Acetyltransferase (GNAT) domain DNQ11_14640 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DNQ11_14645 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain DNQ11_14645 PF00877 NlpC/P60 family DNQ11_14650 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DNQ11_14650 PF13378 Enolase C-terminal domain-like DNQ11_14675 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DNQ11_14705 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DNQ11_14705 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DNQ11_14710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_14710 PF00512 His Kinase A (phospho-acceptor) domain DNQ11_14710 PF00989 PAS fold DNQ11_14710 PF16736 Single Cache-like DNQ11_14735 PF01048 Phosphorylase superfamily DNQ11_14745 PF03808 Glycosyl transferase WecB/TagA/CpsF family DNQ11_14750 PF08439 Oligopeptidase F DNQ11_14750 PF01432 Peptidase family M3 DNQ11_14765 PF02645 Uncharacterised protein, DegV family COG1307 DNQ11_14790 PF07690 Major Facilitator Superfamily DNQ11_14800 PF04519 Polymer-forming cytoskeletal DNQ11_14805 PF13171 Protein of unknown function (DUF4004) DNQ11_14810 PF12793 Sugar transport-related sRNA regulator N-term DNQ11_14810 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DNQ11_14815 PF07690 Major Facilitator Superfamily DNQ11_14835 PF04226 Transglycosylase associated protein DNQ11_14840 PF01156 Inosine-uridine preferring nucleoside hydrolase DNQ11_14850 PF08241 Methyltransferase domain DNQ11_14890 PF00155 Aminotransferase class I and II DNQ11_14895 PF07977 FabA-like domain DNQ11_14900 PF03630 Fumble DNQ11_14920 PF00005 ABC transporter DNQ11_14970 PF01594 AI-2E family transporter DNQ11_14985 PF00296 Luciferase-like monooxygenase DNQ11_14990 PF00528 Binding-protein-dependent transport system inner membrane component DNQ11_14995 PF09084 NMT1/THI5 like DNQ11_15000 PF00005 ABC transporter DNQ11_15040 PF02522 Aminoglycoside 3-N-acetyltransferase DNQ11_15070 PF13536 Putative multidrug resistance efflux transporter DNQ11_15075 PF12867 DinB superfamily DNQ11_15095 PF08713 DNA alkylation repair enzyme DNQ11_15110 PF01522 Polysaccharide deacetylase DNQ11_15120 PF03741 Integral membrane protein TerC family DNQ11_15125 PF00884 Sulfatase DNQ11_15135 PF00005 ABC transporter DNQ11_15135 PF12848 ABC transporter DNQ11_15145 PF03176 MMPL family DNQ11_15150 PF03176 MMPL family DNQ11_15155 PF03176 MMPL family DNQ11_15160 PF16295 Tetracyclin repressor-like, C-terminal domain DNQ11_15160 PF00440 Bacterial regulatory proteins, tetR family DNQ11_15170 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DNQ11_15175 PF01842 ACT domain DNQ11_15175 PF02153 Prephenate dehydrogenase DNQ11_15180 PF00155 Aminotransferase class I and II DNQ11_15185 PF01264 Chorismate synthase DNQ11_15195 PF00793 DAHP synthetase I family DNQ11_15195 PF01817 Chorismate mutase type II DNQ11_15225 PF01636 Phosphotransferase enzyme family DNQ11_15240 PF06725 3D domain DNQ11_15240 PF01476 LysM domain DNQ11_15255 PF04542 Sigma-70 region 2 DNQ11_15255 PF08281 Sigma-70, region 4 DNQ11_15275 PF06039 Malate:quinone oxidoreductase (Mqo) DNQ11_15280 PF13407 Periplasmic binding protein domain DNQ11_15285 PF02653 Branched-chain amino acid transport system / permease component DNQ11_15290 PF02653 Branched-chain amino acid transport system / permease component DNQ11_15295 PF00005 ABC transporter DNQ11_15300 PF04198 Putative sugar-binding domain DNQ11_15300 PF00325 Bacterial regulatory proteins, crp family DNQ11_15315 PF01791 DeoC/LacD family aldolase DNQ11_15335 PF03992 Antibiotic biosynthesis monooxygenase DNQ11_15355 PF01773 Na+ dependent nucleoside transporter N-terminus DNQ11_15355 PF07662 Na+ dependent nucleoside transporter C-terminus DNQ11_15360 PF00171 Aldehyde dehydrogenase family DNQ11_15365 PF01472 PUA domain DNQ11_15365 PF00696 Amino acid kinase family DNQ11_15375 PF14748 Pyrroline-5-carboxylate reductase dimerisation DNQ11_15375 PF03807 NADP oxidoreductase coenzyme F420-dependent DNQ11_15380 PF01546 Peptidase family M20/M25/M40 DNQ11_15385 PF01614 Bacterial transcriptional regulator DNQ11_15385 PF09339 IclR helix-turn-helix domain DNQ11_15395 PF00324 Amino acid permease DNQ11_15400 PF01139 tRNA-splicing ligase RtcB DNQ11_15405 PF00487 Fatty acid desaturase DNQ11_15410 PF00245 Alkaline phosphatase DNQ11_15415 PF11188 Protein of unknown function (DUF2975) DNQ11_15420 PF13443 Cro/C1-type HTH DNA-binding domain DNQ11_15435 PF10086 YhfC intramembrane metalloprotease DNQ11_15445 PF04397 LytTr DNA-binding domain DNQ11_15445 PF00072 Response regulator receiver domain DNQ11_15455 PF13302 Acetyltransferase (GNAT) domain DNQ11_15460 PF12681 Glyoxalase-like domain DNQ11_15480 PF17863 AAA lid domain DNQ11_15480 PF07726 ATPase family associated with various cellular activities (AAA) DNQ11_15495 PF07690 Major Facilitator Superfamily DNQ11_15505 PF00535 Glycosyl transferase family 2 DNQ11_15520 PF00535 Glycosyl transferase family 2 DNQ11_15530 PF00535 Glycosyl transferase family 2 DNQ11_15540 PF00202 Aminotransferase class-III DNQ11_15545 PF06628 Catalase-related immune-responsive DNQ11_15545 PF00199 Catalase DNQ11_15560 PF00144 Beta-lactamase DNQ11_15580 PF07726 ATPase family associated with various cellular activities (AAA) DNQ11_15580 PF17863 AAA lid domain DNQ11_15590 PF00881 Nitroreductase family DNQ11_15595 PF01047 MarR family DNQ11_15605 PF00009 Elongation factor Tu GTP binding domain DNQ11_15605 PF00679 Elongation factor G C-terminus DNQ11_15605 PF14492 Elongation Factor G, domain II DNQ11_15605 PF03764 Elongation factor G, domain IV DNQ11_15615 PF00293 NUDIX domain DNQ11_15630 PF00005 ABC transporter DNQ11_15635 PF00392 Bacterial regulatory proteins, gntR family DNQ11_15650 PF02687 FtsX-like permease family DNQ11_15650 PF00005 ABC transporter DNQ11_15650 PF12704 MacB-like periplasmic core domain DNQ11_15675 PF12833 Helix-turn-helix domain DNQ11_15680 PF00583 Acetyltransferase (GNAT) family DNQ11_15695 PF00892 EamA-like transporter family DNQ11_15700 PF00392 Bacterial regulatory proteins, gntR family DNQ11_15700 PF00155 Aminotransferase class I and II DNQ11_15705 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DNQ11_15710 PF13031 Protein of unknown function (DUF3892) DNQ11_15720 PF00672 HAMP domain DNQ11_15720 PF00512 His Kinase A (phospho-acceptor) domain DNQ11_15725 PF00486 Transcriptional regulatory protein, C terminal DNQ11_15725 PF00072 Response regulator receiver domain DNQ11_15730 PF00561 alpha/beta hydrolase fold DNQ11_15760 PF01925 Sulfite exporter TauE/SafE DNQ11_15765 PF13302 Acetyltransferase (GNAT) domain DNQ11_15770 PF00324 Amino acid permease DNQ11_15780 PF08713 DNA alkylation repair enzyme DNQ11_15785 PF10898 Protein of unknown function (DUF2716) DNQ11_15805 PF00293 NUDIX domain DNQ11_15815 PF10502 Signal peptidase, peptidase S26 DNQ11_15830 PF02146 Sir2 family DNQ11_15835 PF01470 Pyroglutamyl peptidase DNQ11_15865 PF03746 LamB/YcsF family DNQ11_15870 PF02626 Carboxyltransferase domain, subdomain A and B DNQ11_15875 PF02682 Carboxyltransferase domain, subdomain C and D DNQ11_15880 PF01614 Bacterial transcriptional regulator DNQ11_15880 PF09339 IclR helix-turn-helix domain DNQ11_15885 PF10502 Signal peptidase, peptidase S26 DNQ11_15890 PF03932 CutC family DNQ11_15895 PF07454 Stage II sporulation protein P (SpoIIP) DNQ11_15910 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DNQ11_15910 PF02770 Acyl-CoA dehydrogenase, middle domain DNQ11_15910 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DNQ11_15945 PF02915 Rubrerythrin DNQ11_15955 PF00440 Bacterial regulatory proteins, tetR family DNQ11_15960 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DNQ11_15960 PF00391 PEP-utilising enzyme, mobile domain DNQ11_15970 PF00753 Metallo-beta-lactamase superfamily DNQ11_15985 PF07875 Coat F domain DNQ11_15995 PF08892 YqcI/YcgG family DNQ11_16000 PF01810 LysE type translocator DNQ11_16015 PF00269 Small, acid-soluble spore proteins, alpha/beta type DNQ11_16020 PF10710 Protein of unknown function (DUF2512) DNQ11_16025 PF11553 Protein of unknown function (DUF3231) DNQ11_16030 PF00269 Small, acid-soluble spore proteins, alpha/beta type DNQ11_16035 PF08240 Alcohol dehydrogenase GroES-like domain DNQ11_16035 PF13823 Alcohol dehydrogenase GroES-associated DNQ11_16035 PF00107 Zinc-binding dehydrogenase DNQ11_16050 PF10415 Fumarase C C-terminus DNQ11_16050 PF00206 Lyase DNQ11_16055 PF00710 Asparaginase, N-terminal DNQ11_16055 PF17763 Glutaminase/Asparaginase C-terminal domain DNQ11_16060 PF01381 Helix-turn-helix DNQ11_16070 PF12826 Helix-hairpin-helix motif DNQ11_16070 PF02151 UvrB/uvrC motif DNQ11_16070 PF08459 UvrC Helix-hairpin-helix N-terminal DNQ11_16070 PF01541 GIY-YIG catalytic domain DNQ11_16075 PF13520 Amino acid permease DNQ11_16080 PF05525 Branched-chain amino acid transport protein DNQ11_16085 PF03807 NADP oxidoreductase coenzyme F420-dependent DNQ11_16085 PF14748 Pyrroline-5-carboxylate reductase dimerisation DNQ11_16090 PF13564 DoxX-like family DNQ11_16095 PF03949 Malic enzyme, NAD binding domain DNQ11_16095 PF00390 Malic enzyme, N-terminal domain DNQ11_16110 PF03845 Spore germination protein DNQ11_16115 PF03323 Bacillus/Clostridium GerA spore germination protein DNQ11_16125 PF00072 Response regulator receiver domain DNQ11_16125 PF08664 YcbB domain DNQ11_16135 PF04960 Glutaminase DNQ11_16140 PF01235 Sodium:alanine symporter family DNQ11_16175 PF00199 Catalase DNQ11_16175 PF06628 Catalase-related immune-responsive DNQ11_16180 PF00561 alpha/beta hydrolase fold DNQ11_16185 PF00857 Isochorismatase family DNQ11_16205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNQ11_16205 PF03466 LysR substrate binding domain DNQ11_16215 PF01047 MarR family DNQ11_16235 PF11181 Heat induced stress protein YflT DNQ11_16255 PF03073 TspO/MBR family DNQ11_16260 PF00875 DNA photolyase DNQ11_16260 PF03441 FAD binding domain of DNA photolyase DNQ11_16270 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) DNQ11_16275 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DNQ11_16275 PF00361 Proton-conducting membrane transporter DNQ11_16280 PF10057 Uncharacterized conserved protein (DUF2294) DNQ11_16300 PF01040 UbiA prenyltransferase family DNQ11_16305 PF00561 alpha/beta hydrolase fold DNQ11_16315 PF01297 Zinc-uptake complex component A periplasmic DNQ11_16320 PF00950 ABC 3 transport family DNQ11_16325 PF00005 ABC transporter DNQ11_16350 PF01451 Low molecular weight phosphotyrosine protein phosphatase DNQ11_16355 PF01758 Sodium Bile acid symporter family DNQ11_16360 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DNQ11_16365 PF01022 Bacterial regulatory protein, arsR family DNQ11_16380 PF00012 Hsp70 protein DNQ11_16400 PF01037 Lrp/AsnC ligand binding domain DNQ11_16415 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DNQ11_16425 PF01609 Transposase DDE domain DNQ11_16440 PF12833 Helix-turn-helix domain DNQ11_16440 PF02805 Metal binding domain of Ada DNQ11_16450 PF00144 Beta-lactamase DNQ11_16475 PF12802 MarR family DNQ11_16480 PF00067 Cytochrome P450 DNQ11_16480 PF00258 Flavodoxin DNQ11_16480 PF00667 FAD binding domain DNQ11_16480 PF00175 Oxidoreductase NAD-binding domain DNQ11_16490 PF07690 Major Facilitator Superfamily DNQ11_16520 PF00486 Transcriptional regulatory protein, C terminal DNQ11_16520 PF00072 Response regulator receiver domain DNQ11_16525 PF00512 His Kinase A (phospho-acceptor) domain DNQ11_16525 PF00672 HAMP domain DNQ11_16525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_16560 PF00291 Pyridoxal-phosphate dependent enzyme DNQ11_16590 PF01381 Helix-turn-helix DNQ11_16605 PF00753 Metallo-beta-lactamase superfamily DNQ11_16610 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family DNQ11_16620 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DNQ11_16620 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DNQ11_16625 PF04072 Leucine carboxyl methyltransferase DNQ11_16640 PF00005 ABC transporter DNQ11_16645 PF02687 FtsX-like permease family DNQ11_16660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_16660 PF00672 HAMP domain DNQ11_16660 PF00512 His Kinase A (phospho-acceptor) domain DNQ11_16665 PF00486 Transcriptional regulatory protein, C terminal DNQ11_16665 PF00072 Response regulator receiver domain DNQ11_16675 PF01047 MarR family DNQ11_16685 PF04299 Putative FMN-binding domain DNQ11_16690 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DNQ11_16690 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DNQ11_16695 PF07690 Major Facilitator Superfamily DNQ11_16700 PF02589 LUD domain DNQ11_16705 PF11870 Domain of unknown function (DUF3390) DNQ11_16705 PF02589 LUD domain DNQ11_16705 PF13183 4Fe-4S dicluster domain DNQ11_16710 PF02754 Cysteine-rich domain DNQ11_16715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNQ11_16715 PF03466 LysR substrate binding domain DNQ11_16725 PF17676 LD-carboxypeptidase C-terminal domain DNQ11_16725 PF02016 LD-carboxypeptidase N-terminal domain DNQ11_16755 PF07690 Major Facilitator Superfamily DNQ11_16760 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DNQ11_16760 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DNQ11_16765 PF05116 Sucrose-6F-phosphate phosphohydrolase DNQ11_16775 PF00356 Bacterial regulatory proteins, lacI family DNQ11_16780 PF18801 response regulator aspartate phosphatase H, N terminal DNQ11_16800 PF00817 impB/mucB/samB family DNQ11_16800 PF11798 IMS family HHH motif DNQ11_16800 PF11799 impB/mucB/samB family C-terminal domain DNQ11_16815 PF00672 HAMP domain DNQ11_16815 PF02743 Cache domain DNQ11_16815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DNQ11_16830 PF01554 MatE DNQ11_16845 PF01752 Collagenase DNQ11_16845 PF08453 Peptidase family M9 N-terminal DNQ11_16845 PF18496 Collagenase G catalytic helper subdomain DNQ11_16850 PF02661 Fic/DOC family DNQ11_16855 PF07690 Major Facilitator Superfamily DNQ11_16860 PF00440 Bacterial regulatory proteins, tetR family DNQ11_16860 PF16859 Tetracyclin repressor-like, C-terminal domain DNQ11_16870 PF01022 Bacterial regulatory protein, arsR family DNQ11_16880 PF03313 Serine dehydratase alpha chain DNQ11_16885 PF01842 ACT domain DNQ11_16885 PF03315 Serine dehydratase beta chain DNQ11_16900 PF00202 Aminotransferase class-III DNQ11_16905 PF17788 HypF Kae1-like domain DNQ11_16905 PF07503 HypF finger DNQ11_16905 PF00708 Acylphosphatase DNQ11_16905 PF01300 Telomere recombination DNQ11_16910 PF02769 AIR synthase related protein, C-terminal domain DNQ11_16910 PF00586 AIR synthase related protein, N-terminal domain DNQ11_16915 PF00857 Isochorismatase family DNQ11_16920 PF01037 Lrp/AsnC ligand binding domain DNQ11_16925 PF13520 Amino acid permease DNQ11_16945 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DNQ11_16945 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DNQ11_16945 PF01842 ACT domain DNQ11_16950 PF00266 Aminotransferase class-V DNQ11_16965 PF08281 Sigma-70, region 4 DNQ11_16965 PF04542 Sigma-70 region 2 DNQ11_16980 PF07883 Cupin domain DNQ11_16990 PF01497 Periplasmic binding protein DNQ11_16990 PF12833 Helix-turn-helix domain DNQ11_17000 PF01804 Penicillin amidase DNQ11_17040 PF14044 NETI protein DNQ11_17045 PF07690 Major Facilitator Superfamily DNQ11_17050 PF12697 Alpha/beta hydrolase family DNQ11_17055 PF01047 MarR family DNQ11_17060 PF07690 Major Facilitator Superfamily DNQ11_17075 PF12679 ABC-2 family transporter protein DNQ11_17085 PF13396 Phospholipase_D-nuclease N-terminal DNQ11_17095 PF17314 Family of unknown function (DUF5360) DNQ11_17100 PF00893 Small Multidrug Resistance protein DNQ11_17105 PF00440 Bacterial regulatory proteins, tetR family DNQ11_17110 PF01289 Thiol-activated cytolysin DNQ11_17110 PF17440 Thiol-activated cytolysin beta sandwich domain DNQ11_17115 PF02667 Short chain fatty acid transporter DNQ11_17125 PF02525 Flavodoxin-like fold DNQ11_17145 PF14256 YwiC-like protein DNQ11_17155 PF00005 ABC transporter DNQ11_17160 PF02361 Cobalt transport protein DNQ11_17175 PF03737 Aldolase/RraA DNQ11_17180 PF03606 C4-dicarboxylate anaerobic carrier DNQ11_17185 PF04231 Endonuclease I DNQ11_17200 PF01381 Helix-turn-helix DNQ11_17205 PF02660 Glycerol-3-phosphate acyltransferase DNQ11_17210 PF04073 Aminoacyl-tRNA editing domain DNQ11_17215 PF13393 Histidyl-tRNA synthetase DNQ11_17215 PF03129 Anticodon binding domain DNQ11_17230 PF01638 HxlR-like helix-turn-helix DNQ11_17235 PF00881 Nitroreductase family DNQ11_17245 PF02887 Pyruvate kinase, alpha/beta domain DNQ11_17245 PF00391 PEP-utilising enzyme, mobile domain DNQ11_17245 PF00224 Pyruvate kinase, barrel domain DNQ11_17270 PF00005 ABC transporter DNQ11_17295 PF13419 Haloacid dehalogenase-like hydrolase DNQ11_17330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DNQ11_17335 PF00480 ROK family DNQ11_17340 PF07690 Major Facilitator Superfamily DNQ11_17345 PF14602 Hexapeptide repeat of succinyl-transferase DNQ11_17345 PF12464 Maltose acetyltransferase DNQ11_17355 PF00005 ABC transporter DNQ11_17365 PF00579 tRNA synthetases class I (W and Y) DNQ11_17370 PF13288 DXP reductoisomerase C-terminal domain DNQ11_17370 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DNQ11_17370 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DNQ11_17375 PF01594 AI-2E family transporter DNQ11_17395 PF08241 Methyltransferase domain DNQ11_17405 PF07690 Major Facilitator Superfamily DNQ11_17425 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DNQ11_17435 PF01595 Cyclin M transmembrane N-terminal domain DNQ11_17435 PF03471 Transporter associated domain DNQ11_17435 PF00571 CBS domain DNQ11_17440 PF13411 MerR HTH family regulatory protein DNQ11_17445 PF00892 EamA-like transporter family DNQ11_17450 PF00805 Pentapeptide repeats (8 copies) DNQ11_17455 PF06906 Protein of unknown function (DUF1272) DNQ11_17465 PF10282 Lactonase, 7-bladed beta-propeller DNQ11_17470 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DNQ11_17470 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DNQ11_17475 PF02447 GntP family permease DNQ11_17480 PF00923 Transaldolase/Fructose-6-phosphate aldolase DNQ11_17485 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DNQ11_17485 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DNQ11_17490 PF02779 Transketolase, pyrimidine binding domain DNQ11_17490 PF00456 Transketolase, thiamine diphosphate binding domain DNQ11_17490 PF02780 Transketolase, C-terminal domain DNQ11_17495 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DNQ11_17495 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DNQ11_17500 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DNQ11_17500 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DNQ11_17505 PF00107 Zinc-binding dehydrogenase DNQ11_17505 PF08240 Alcohol dehydrogenase GroES-like domain DNQ11_17510 PF00296 Luciferase-like monooxygenase DNQ11_17520 PF00698 Acyl transferase domain DNQ11_17520 PF14765 Polyketide synthase dehydratase DNQ11_17520 PF08240 Alcohol dehydrogenase GroES-like domain DNQ11_17520 PF02801 Beta-ketoacyl synthase, C-terminal domain DNQ11_17520 PF00107 Zinc-binding dehydrogenase DNQ11_17520 PF16197 Ketoacyl-synthetase C-terminal extension DNQ11_17520 PF00109 Beta-ketoacyl synthase, N-terminal domain DNQ11_17520 PF00550 Phosphopantetheine attachment site DNQ11_17520 PF08659 KR domain DNQ11_17530 PF00106 short chain dehydrogenase DNQ11_17535 PF07504 Fungalysin/Thermolysin Propeptide Motif DNQ11_17535 PF02868 Thermolysin metallopeptidase, alpha-helical domain DNQ11_17535 PF03413 Peptidase propeptide and YPEB domain DNQ11_17535 PF01447 Thermolysin metallopeptidase, catalytic domain DNQ11_17555 PF00248 Aldo/keto reductase family DNQ11_17560 PF07690 Major Facilitator Superfamily DNQ11_17575 PF03928 Haem-degrading DNQ11_17580 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DNQ11_17610 PF03960 ArsC family DNQ11_17620 PF01638 HxlR-like helix-turn-helix DNQ11_17625 PF00392 Bacterial regulatory proteins, gntR family DNQ11_17625 PF07702 UTRA domain DNQ11_17640 PF01638 HxlR-like helix-turn-helix DNQ11_17645 PF01638 HxlR-like helix-turn-helix DNQ11_17650 PF00248 Aldo/keto reductase family DNQ11_17680 PF02567 Phenazine biosynthesis-like protein DNQ11_17700 PF13193 AMP-binding enzyme C-terminal domain DNQ11_17700 PF00501 AMP-binding enzyme DNQ11_17710 PF01638 HxlR-like helix-turn-helix DNQ11_17730 PF01022 Bacterial regulatory protein, arsR family DNQ11_17740 PF12791 Anti-sigma factor N-terminus DNQ11_17745 PF04542 Sigma-70 region 2 DNQ11_17750 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 DNQ11_17750 PF00535 Glycosyl transferase family 2 DNQ11_17760 PF00440 Bacterial regulatory proteins, tetR family DNQ11_17780 PF05656 Protein of unknown function (DUF805) DNQ11_17785 PF01061 ABC-2 type transporter DNQ11_17790 PF13732 Domain of unknown function (DUF4162) DNQ11_17790 PF00005 ABC transporter DNQ11_17810 PF03063 Prismane/CO dehydrogenase family DNQ11_17825 PF00753 Metallo-beta-lactamase superfamily DNQ11_17830 PF01183 Glycosyl hydrolases family 25 DNQ11_17830 PF01471 Putative peptidoglycan binding domain DNQ11_17855 PF00144 Beta-lactamase DNQ11_17895 PF00753 Metallo-beta-lactamase superfamily DNQ11_17900 PF00107 Zinc-binding dehydrogenase DNQ11_17900 PF08240 Alcohol dehydrogenase GroES-like domain DNQ11_17905 PF00324 Amino acid permease DNQ11_17910 PF07690 Major Facilitator Superfamily DNQ11_17940 PF02585 GlcNAc-PI de-N-acetylase DNQ11_17945 PF08830 Protein of unknown function (DUF1806) DNQ11_17950 PF03600 Citrate transporter DNQ11_17980 PF01032 FecCD transport family DNQ11_17985 PF01032 FecCD transport family DNQ11_17990 PF05675 Protein of unknown function (DUF817) DNQ11_17995 PF02567 Phenazine biosynthesis-like protein DNQ11_18000 PF13170 Protein of unknown function (DUF4003) DNQ11_18015 PF10901 Protein of unknown function (DUF2690) DNQ11_18025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNQ11_18025 PF03466 LysR substrate binding domain DNQ11_18030 PF08240 Alcohol dehydrogenase GroES-like domain DNQ11_18030 PF00107 Zinc-binding dehydrogenase DNQ11_18045 PF01713 Smr domain DNQ11_18045 PF00488 MutS domain V DNQ11_18055 PF00128 Alpha amylase, catalytic domain DNQ11_18055 PF09154 Domain of unknown function (DUF1939) DNQ11_18070 PF00144 Beta-lactamase DNQ11_18080 PF07690 Major Facilitator Superfamily DNQ11_18085 PF03466 LysR substrate binding domain DNQ11_18085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNQ11_18100 PF03009 Glycerophosphoryl diester phosphodiesterase family DNQ11_18120 PF01494 FAD binding domain DNQ11_18125 PF01022 Bacterial regulatory protein, arsR family DNQ11_18130 PF08240 Alcohol dehydrogenase GroES-like domain DNQ11_18130 PF00107 Zinc-binding dehydrogenase DNQ11_18135 PF02696 Uncharacterized ACR, YdiU/UPF0061 family DNQ11_18150 PF04299 Putative FMN-binding domain DNQ11_18155 PF04229 GrpB protein DNQ11_18165 PF01758 Sodium Bile acid symporter family DNQ11_18170 PF01565 FAD binding domain DNQ11_18170 PF02913 FAD linked oxidases, C-terminal domain DNQ11_18200 PF00132 Bacterial transferase hexapeptide (six repeats) DNQ11_18205 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DNQ11_18215 PF00378 Enoyl-CoA hydratase/isomerase DNQ11_18220 PF08453 Peptidase family M9 N-terminal DNQ11_18220 PF18496 Collagenase G catalytic helper subdomain DNQ11_18220 PF01752 Collagenase DNQ11_18225 PF02308 MgtC family DNQ11_18240 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DNQ11_18245 PF04294 VanW like protein DNQ11_18255 PF13037 Domain of unknown function (DUF3898) DNQ11_18255 PF13039 Protein of unknown function (DUF3900) DNQ11_18275 PF00313 'Cold-shock' DNA-binding domain DNQ11_18285 PF00258 Flavodoxin DNQ11_18295 PF00293 NUDIX domain DNQ11_18305 PF00132 Bacterial transferase hexapeptide (six repeats) DNQ11_18315 PF00106 short chain dehydrogenase DNQ11_18325 PF00206 Lyase DNQ11_18325 PF14698 Argininosuccinate lyase C-terminal DNQ11_18335 PF01156 Inosine-uridine preferring nucleoside hydrolase DNQ11_18340 PF00474 Sodium:solute symporter family DNQ11_18350 PF00171 Aldehyde dehydrogenase family DNQ11_18360 PF14151 YfhD-like protein DNQ11_18365 PF13249 Squalene-hopene cyclase N-terminal domain DNQ11_18365 PF13243 Squalene-hopene cyclase C-terminal domain DNQ11_18370 PF02681 Divergent PAP2 family DNQ11_18375 PF00892 EamA-like transporter family DNQ11_18380 PF06961 Protein of unknown function (DUF1294) DNQ11_18395 PF10609 NUBPL iron-transfer P-loop NTPase DNQ11_18405 PF02391 MoaE protein DNQ11_18410 PF03453 MoeA N-terminal region (domain I and II) DNQ11_18410 PF03454 MoeA C-terminal region (domain IV) DNQ11_18410 PF00994 Probable molybdopterin binding domain DNQ11_18415 PF00899 ThiF family DNQ11_18420 PF01226 Formate/nitrite transporter DNQ11_18430 PF04055 Radical SAM superfamily DNQ11_18430 PF06463 Molybdenum Cofactor Synthesis C DNQ11_18435 PF02634 FdhD/NarQ family DNQ11_18440 PF10057 Uncharacterized conserved protein (DUF2294) DNQ11_18445 PF07849 Protein of unknown function (DUF1641) DNQ11_18450 PF00037 4Fe-4S binding domain DNQ11_18450 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DNQ11_18450 PF00384 Molybdopterin oxidoreductase DNQ11_18450 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DNQ11_18450 PF01568 Molydopterin dinucleotide binding domain DNQ11_18460 PF03323 Bacillus/Clostridium GerA spore germination protein DNQ11_18500 PF08241 Methyltransferase domain DNQ11_18505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DNQ11_18510 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DNQ11_18515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DNQ11_18520 PF00375 Sodium:dicarboxylate symporter family DNQ11_18525 PF03816 Cell envelope-related transcriptional attenuator domain DNQ11_18535 PF04542 Sigma-70 region 2 DNQ11_18535 PF08281 Sigma-70, region 4 DNQ11_18555 PF00005 ABC transporter DNQ11_18555 PF13732 Domain of unknown function (DUF4162) DNQ11_18565 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DNQ11_18565 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DNQ11_18570 PF00521 DNA gyrase/topoisomerase IV, subunit A DNQ11_18570 PF03989 DNA gyrase C-terminal domain, beta-propeller DNQ11_18575 PF00986 DNA gyrase B subunit, carboxyl terminus DNQ11_18575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_18575 PF01751 Toprim domain DNQ11_18575 PF00204 DNA gyrase B DNQ11_18585 PF13380 CoA binding domain DNQ11_18590 PF13180 PDZ domain DNQ11_18595 PF00486 Transcriptional regulatory protein, C terminal DNQ11_18595 PF00072 Response regulator receiver domain DNQ11_18605 PF13597 Anaerobic ribonucleoside-triphosphate reductase DNQ11_18605 PF03477 ATP cone domain DNQ11_18610 PF02660 Glycerol-3-phosphate acyltransferase DNQ11_18615 PF01521 Iron-sulphur cluster biosynthesis DNQ11_18620 PF03061 Thioesterase superfamily DNQ11_18625 PF00704 Glycosyl hydrolases family 18 DNQ11_18625 PF01476 LysM domain DNQ11_18635 PF08177 Small acid-soluble spore protein N family DNQ11_18640 PF13040 Fur-regulated basic protein B DNQ11_18645 PF07733 Bacterial DNA polymerase III alpha NTPase domain DNQ11_18645 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DNQ11_18645 PF14579 Helix-hairpin-helix motif DNQ11_18645 PF11490 DNA polymerase III polC-type N-terminus II DNQ11_18645 PF00929 Exonuclease DNQ11_18645 PF01336 OB-fold nucleic acid binding domain DNQ11_18645 PF02811 PHP domain DNQ11_18655 PF00578 AhpC/TSA family DNQ11_18665 PF00664 ABC transporter transmembrane region DNQ11_18665 PF00005 ABC transporter DNQ11_18665 PF03412 Peptidase C39 family DNQ11_18670 PF00330 Aconitase family (aconitate hydratase) DNQ11_18670 PF00694 Aconitase C-terminal domain DNQ11_18680 PF01522 Polysaccharide deacetylase DNQ11_18710 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DNQ11_18710 PF01411 tRNA synthetases class II (A) DNQ11_18710 PF02272 DHHA1 domain DNQ11_18715 PF00293 NUDIX domain DNQ11_18715 PF13344 Haloacid dehalogenase-like hydrolase DNQ11_18725 PF00108 Thiolase, N-terminal domain DNQ11_18725 PF02803 Thiolase, C-terminal domain DNQ11_18730 PF00501 AMP-binding enzyme DNQ11_18730 PF13193 AMP-binding enzyme C-terminal domain DNQ11_18735 PF02632 BioY family DNQ11_18740 PF13193 AMP-binding enzyme C-terminal domain DNQ11_18740 PF00501 AMP-binding enzyme DNQ11_18765 PF05532 CsbD-like DNQ11_18795 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DNQ11_18795 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DNQ11_18810 PF00512 His Kinase A (phospho-acceptor) domain DNQ11_18810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_18810 PF00989 PAS fold DNQ11_18810 PF13188 PAS domain DNQ11_18810 PF13426 PAS domain DNQ11_18815 PF01738 Dienelactone hydrolase family DNQ11_18820 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DNQ11_18825 PF00474 Sodium:solute symporter family DNQ11_18830 PF01645 Conserved region in glutamate synthase DNQ11_18835 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DNQ11_18840 PF02559 CarD-like/TRCF domain DNQ11_18845 PF00491 Arginase family DNQ11_18850 PF01979 Amidohydrolase family DNQ11_18855 PF17391 Urocanase N-terminal domain DNQ11_18855 PF17392 Urocanase C-terminal domain DNQ11_18855 PF01175 Urocanase Rossmann-like domain DNQ11_18860 PF00221 Aromatic amino acid lyase DNQ11_18865 PF09021 HutP DNQ11_18870 PF01209 ubiE/COQ5 methyltransferase family DNQ11_18895 PF11084 Protein of unknown function (DUF2621) DNQ11_18930 PF07301 Protein of unknown function (DUF1453) DNQ11_18935 PF02683 Cytochrome C biogenesis protein transmembrane region DNQ11_18950 PF03466 LysR substrate binding domain DNQ11_18950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNQ11_18955 PF03788 LrgA family DNQ11_18960 PF04172 LrgB-like family DNQ11_18965 PF13344 Haloacid dehalogenase-like hydrolase DNQ11_18965 PF00293 NUDIX domain DNQ11_18985 PF01510 N-acetylmuramoyl-L-alanine amidase DNQ11_18985 PF01471 Putative peptidoglycan binding domain DNQ11_19000 PF00005 ABC transporter DNQ11_19000 PF00664 ABC transporter transmembrane region DNQ11_19005 PF00664 ABC transporter transmembrane region DNQ11_19005 PF00005 ABC transporter DNQ11_19010 PF03672 Uncharacterised protein family (UPF0154) DNQ11_19015 PF10747 Sporulation inhibitor of replication protein SirA DNQ11_19020 PF00456 Transketolase, thiamine diphosphate binding domain DNQ11_19020 PF02779 Transketolase, pyrimidine binding domain DNQ11_19020 PF02780 Transketolase, C-terminal domain DNQ11_19030 PF12323 Helix-turn-helix domain DNQ11_19030 PF07282 Putative transposase DNA-binding domain DNQ11_19030 PF01385 Probable transposase DNQ11_19040 PF00528 Binding-protein-dependent transport system inner membrane component DNQ11_19045 PF00528 Binding-protein-dependent transport system inner membrane component DNQ11_19050 PF00005 ABC transporter DNQ11_19065 PF05979 Bacterial protein of unknown function (DUF896) DNQ11_19070 PF00239 Resolvase, N terminal domain DNQ11_19075 PF00717 Peptidase S24-like DNQ11_19075 PF01726 LexA DNA binding domain DNQ11_19090 PF03551 Transcriptional regulator PadR-like family DNQ11_19135 PF01510 N-acetylmuramoyl-L-alanine amidase DNQ11_19135 PF01471 Putative peptidoglycan binding domain DNQ11_19135 PF01476 LysM domain DNQ11_19140 PF05105 Bacteriophage holin family DNQ11_19300 PF08281 Sigma-70, region 4 DNQ11_19345 PF02511 Thymidylate synthase complementing protein DNQ11_19355 PF00145 C-5 cytosine-specific DNA methylase DNQ11_19435 PF01381 Helix-turn-helix DNQ11_19455 PF02899 Phage integrase, N-terminal SAM-like domain DNQ11_19455 PF00589 Phage integrase family DNQ11_19460 PF03951 Glutamine synthetase, beta-Grasp domain DNQ11_19460 PF00120 Glutamine synthetase, catalytic domain DNQ11_19465 PF13411 MerR HTH family regulatory protein DNQ11_19470 PF06838 Methionine gamma-lyase DNQ11_19480 PF03458 UPF0126 domain DNQ11_19490 PF17866 AAA lid domain DNQ11_19490 PF00004 ATPase family associated with various cellular activities (AAA) DNQ11_19505 PF17209 Hfq protein DNQ11_19520 PF01476 LysM domain DNQ11_19520 PF06725 3D domain DNQ11_19530 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DNQ11_19530 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DNQ11_19535 PF00294 pfkB family carbohydrate kinase DNQ11_19540 PF00455 DeoR C terminal sensor domain DNQ11_19540 PF08220 DeoR-like helix-turn-helix domain DNQ11_19550 PF04238 Protein of unknown function (DUF420) DNQ11_19575 PF00041 Fibronectin type III domain DNQ11_19575 PF00704 Glycosyl hydrolases family 18 DNQ11_19585 PF10518 TAT (twin-arginine translocation) pathway signal sequence DNQ11_19585 PF00149 Calcineurin-like phosphoesterase DNQ11_19590 PF01226 Formate/nitrite transporter DNQ11_19595 PF00216 Bacterial DNA-binding protein DNQ11_19605 PF00403 Heavy-metal-associated domain DNQ11_19610 PF00403 Heavy-metal-associated domain DNQ11_19615 PF02583 Metal-sensitive transcriptional repressor DNQ11_19625 PF00756 Putative esterase DNQ11_19630 PF00005 ABC transporter DNQ11_19635 PF01032 FecCD transport family DNQ11_19640 PF01032 FecCD transport family DNQ11_19650 PF03372 Endonuclease/Exonuclease/phosphatase family DNQ11_19655 PF02805 Metal binding domain of Ada DNQ11_19655 PF12833 Helix-turn-helix domain DNQ11_19660 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DNQ11_19660 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DNQ11_19665 PF00730 HhH-GPD superfamily base excision DNA repair protein DNQ11_19665 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain DNQ11_19670 PF01546 Peptidase family M20/M25/M40 DNQ11_19670 PF07687 Peptidase dimerisation domain DNQ11_19690 PF00561 alpha/beta hydrolase fold DNQ11_19695 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DNQ11_19700 PF00990 Diguanylate cyclase, GGDEF domain DNQ11_19700 PF03707 Bacterial signalling protein N terminal repeat DNQ11_19700 PF00563 EAL domain DNQ11_19715 PF10787 Uncharacterised protein from bacillus cereus group DNQ11_19720 PF04172 LrgB-like family DNQ11_19725 PF03788 LrgA family DNQ11_19730 PF00392 Bacterial regulatory proteins, gntR family DNQ11_19730 PF00155 Aminotransferase class I and II DNQ11_19735 PF00364 Biotin-requiring enzyme DNQ11_19735 PF00561 alpha/beta hydrolase fold DNQ11_19740 PF02585 GlcNAc-PI de-N-acetylase DNQ11_19755 PF00388 Phosphatidylinositol-specific phospholipase C, X domain DNQ11_19760 PF00082 Subtilase family DNQ11_19765 PF07486 Cell Wall Hydrolase DNQ11_19770 PF03275 UDP-galactopyranose mutase DNQ11_19775 PF00884 Sulfatase DNQ11_19790 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family DNQ11_19795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_19795 PF00512 His Kinase A (phospho-acceptor) domain DNQ11_19800 PF00072 Response regulator receiver domain DNQ11_19800 PF00486 Transcriptional regulatory protein, C terminal DNQ11_19815 PF00005 ABC transporter DNQ11_19820 PF01119 DNA mismatch repair protein, C-terminal domain DNQ11_19820 PF08676 MutL C terminal dimerisation domain DNQ11_19825 PF05188 MutS domain II DNQ11_19825 PF00488 MutS domain V DNQ11_19825 PF05192 MutS domain III DNQ11_19825 PF05190 MutS family domain IV DNQ11_19825 PF01624 MutS domain I DNQ11_19830 PF10628 Outer spore coat protein E (CotE) DNQ11_19835 PF06133 Control of competence regulator ComK, YlbF/YmcA DNQ11_19840 PF04055 Radical SAM superfamily DNQ11_19840 PF01938 TRAM domain DNQ11_19840 PF00919 Uncharacterized protein family UPF0004 DNQ11_19845 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DNQ11_19850 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DNQ11_19850 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DNQ11_19850 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DNQ11_19855 PF01244 Membrane dipeptidase (Peptidase family M19) DNQ11_19860 PF04232 Stage V sporulation protein S (SpoVS) DNQ11_19865 PF13277 YmdB-like protein DNQ11_19870 PF01966 HD domain DNQ11_19870 PF00013 KH domain DNQ11_19870 PF12072 Domain of unknown function (DUF3552) DNQ11_19875 PF00154 recA bacterial DNA recombination protein DNQ11_19885 PF00994 Probable molybdopterin binding domain DNQ11_19885 PF18146 Damage-inducible protein CinA KH domain DNQ11_19885 PF02464 Competence-damaged protein DNQ11_19890 PF01066 CDP-alcohol phosphatidyltransferase DNQ11_19895 PF13464 Domain of unknown function (DUF4115) DNQ11_19900 PF11868 Protein of unknown function (DUF3388) DNQ11_19905 PF11588 Protein of unknown function (DUF3243) DNQ11_19915 PF00675 Insulinase (Peptidase family M16) DNQ11_19915 PF05193 Peptidase M16 inactive domain DNQ11_19920 PF05193 Peptidase M16 inactive domain DNQ11_19945 PF00392 Bacterial regulatory proteins, gntR family DNQ11_19945 PF07702 UTRA domain DNQ11_19950 PF01580 FtsK/SpoIIIE family DNQ11_19950 PF17854 FtsK alpha domain DNQ11_19950 PF09397 Ftsk gamma domain DNQ11_19955 PF14035 YlzJ-like protein DNQ11_19960 PF00574 Clp protease DNQ11_19965 PF00753 Metallo-beta-lactamase superfamily DNQ11_19965 PF17770 Ribonuclease J C-terminal domain DNQ11_19965 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DNQ11_19975 PF00701 Dihydrodipicolinate synthetase family DNQ11_19980 PF13840 ACT domain DNQ11_19980 PF00696 Amino acid kinase family DNQ11_19985 PF01118 Semialdehyde dehydrogenase, NAD binding domain DNQ11_19985 PF02774 Semialdehyde dehydrogenase, dimerisation domain DNQ11_19990 PF02441 Flavoprotein DNQ11_19995 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DNQ11_19995 PF16924 Dipicolinate synthase subunit A N-terminal domain DNQ11_20005 PF05239 PRC-barrel domain DNQ11_20010 PF05193 Peptidase M16 inactive domain DNQ11_20010 PF00675 Insulinase (Peptidase family M16) DNQ11_20015 PF01522 Polysaccharide deacetylase DNQ11_20020 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DNQ11_20020 PF01138 3' exoribonuclease family, domain 1 DNQ11_20020 PF03725 3' exoribonuclease family, domain 2 DNQ11_20020 PF00575 S1 RNA binding domain DNQ11_20020 PF00013 KH domain DNQ11_20025 PF00312 Ribosomal protein S15 DNQ11_20030 PF01687 Riboflavin kinase DNQ11_20030 PF06574 FAD synthetase DNQ11_20035 PF01509 TruB family pseudouridylate synthase (N terminal domain) DNQ11_20035 PF16198 tRNA pseudouridylate synthase B C-terminal domain DNQ11_20040 PF02033 Ribosome-binding factor A DNQ11_20045 PF04456 Protein of unknown function (DUF503) DNQ11_20050 PF00009 Elongation factor Tu GTP binding domain DNQ11_20050 PF11987 Translation-initiation factor 2 DNQ11_20050 PF04760 Translation initiation factor IF-2, N-terminal region DNQ11_20055 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family DNQ11_20060 PF04296 Protein of unknown function (DUF448) DNQ11_20065 PF13184 NusA-like KH domain DNQ11_20065 PF08529 NusA N-terminal domain DNQ11_20065 PF00575 S1 RNA binding domain DNQ11_20070 PF17384 RimP C-terminal SH3 domain DNQ11_20070 PF02576 RimP N-terminal domain DNQ11_20075 PF11490 DNA polymerase III polC-type N-terminus II DNQ11_20075 PF14480 DNA polymerase III polC-type N-terminus I DNQ11_20075 PF00929 Exonuclease DNQ11_20075 PF07733 Bacterial DNA polymerase III alpha NTPase domain DNQ11_20075 PF02811 PHP domain DNQ11_20075 PF14579 Helix-hairpin-helix motif DNQ11_20075 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DNQ11_20085 PF04073 Aminoacyl-tRNA editing domain DNQ11_20085 PF03129 Anticodon binding domain DNQ11_20085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DNQ11_20090 PF02163 Peptidase family M50 DNQ11_20090 PF17820 PDZ domain DNQ11_20095 PF13288 DXP reductoisomerase C-terminal domain DNQ11_20095 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DNQ11_20095 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DNQ11_20105 PF01255 Putative undecaprenyl diphosphate synthase DNQ11_20110 PF01765 Ribosome recycling factor DNQ11_20115 PF00696 Amino acid kinase family DNQ11_20120 PF00889 Elongation factor TS DNQ11_20125 PF00318 Ribosomal protein S2 DNQ11_20130 PF08222 CodY helix-turn-helix domain DNQ11_20130 PF06018 CodY GAF-like domain DNQ11_20135 PF00004 ATPase family associated with various cellular activities (AAA) DNQ11_20135 PF07724 AAA domain (Cdc48 subfamily) DNQ11_20135 PF10431 C-terminal, D2-small domain, of ClpB protein DNQ11_20140 PF00227 Proteasome subunit DNQ11_20145 PF00589 Phage integrase family DNQ11_20145 PF02899 Phage integrase, N-terminal SAM-like domain DNQ11_20150 PF01134 Glucose inhibited division protein A DNQ11_20155 PF01751 Toprim domain DNQ11_20155 PF01131 DNA topoisomerase DNQ11_20155 PF01396 Topoisomerase DNA binding C4 zinc finger DNQ11_20165 PF00549 CoA-ligase DNQ11_20165 PF02629 CoA binding domain DNQ11_20170 PF08442 ATP-grasp domain DNQ11_20170 PF00549 CoA-ligase DNQ11_20175 PF01351 Ribonuclease HII DNQ11_20180 PF01926 50S ribosome-binding GTPase DNQ11_20185 PF10502 Signal peptidase, peptidase S26 DNQ11_20190 PF01245 Ribosomal protein L19 DNQ11_20195 PF01746 tRNA (Guanine-1)-methyltransferase DNQ11_20200 PF05239 PRC-barrel domain DNQ11_20200 PF01782 RimM N-terminal domain DNQ11_20210 PF00886 Ribosomal protein S16 DNQ11_20215 PF00448 SRP54-type protein, GTPase domain DNQ11_20215 PF02881 SRP54-type protein, helical bundle domain DNQ11_20215 PF02978 Signal peptide binding domain DNQ11_20220 PF04297 Putative helix-turn-helix protein, YlxM / p13 like DNQ11_20225 PF02881 SRP54-type protein, helical bundle domain DNQ11_20225 PF00448 SRP54-type protein, GTPase domain DNQ11_20230 PF02463 RecF/RecN/SMC N terminal domain DNQ11_20230 PF06470 SMC proteins Flexible Hinge Domain DNQ11_20235 PF14622 Ribonuclease-III-like DNQ11_20235 PF00035 Double-stranded RNA binding motif DNQ11_20240 PF00550 Phosphopantetheine attachment site DNQ11_20250 PF00698 Acyl transferase domain DNQ11_20255 PF02504 Fatty acid synthesis protein DNQ11_20260 PF03061 Thioesterase superfamily DNQ11_20265 PF17191 RecG wedge domain DNQ11_20265 PF00271 Helicase conserved C-terminal domain DNQ11_20265 PF00270 DEAD/DEAH box helicase DNQ11_20270 PF13684 Dihydroxyacetone kinase family DNQ11_20270 PF02734 DAK2 domain DNQ11_20275 PF03780 Asp23 family, cell envelope-related function DNQ11_20280 PF00830 Ribosomal L28 family DNQ11_20285 PF08183 Stage V sporulation protein family DNQ11_20290 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain DNQ11_20290 PF04263 Thiamin pyrophosphokinase, catalytic domain DNQ11_20295 PF00834 Ribulose-phosphate 3 epimerase family DNQ11_20300 PF03193 RsgA GTPase DNQ11_20300 PF16745 RsgA N-terminal domain DNQ11_20305 PF03793 PASTA domain DNQ11_20305 PF00069 Protein kinase domain DNQ11_20315 PF04055 Radical SAM superfamily DNQ11_20320 PF01189 16S rRNA methyltransferase RsmB/F DNQ11_20320 PF01029 NusB family DNQ11_20325 PF00551 Formyl transferase DNQ11_20325 PF02911 Formyl transferase, C-terminal domain DNQ11_20330 PF01327 Polypeptide deformylase DNQ11_20335 PF00271 Helicase conserved C-terminal domain DNQ11_20335 PF17764 3′ DNA-binding domain (3′BD) DNQ11_20335 PF18074 Primosomal protein N C-terminal domain DNQ11_20335 PF04851 Type III restriction enzyme, res subunit DNQ11_20335 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DNQ11_20340 PF04127 DNA / pantothenate metabolism flavoprotein DNQ11_20340 PF02441 Flavoprotein DNQ11_20345 PF01192 RNA polymerase Rpb6 DNQ11_20350 PF00625 Guanylate kinase DNQ11_20355 PF04025 Domain of unknown function (DUF370) DNQ11_20360 PF03755 YicC-like family, N-terminal region DNQ11_20360 PF08340 Domain of unknown function (DUF1732) DNQ11_20365 PF00690 Cation transporter/ATPase, N-terminus DNQ11_20365 PF00689 Cation transporting ATPase, C-terminus DNQ11_20375 PF00557 Metallopeptidase family M24 DNQ11_20375 PF01321 Creatinase/Prolidase N-terminal domain DNQ11_20410 PF00156 Phosphoribosyl transferase domain DNQ11_20415 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DNQ11_20420 PF01180 Dihydroorotate dehydrogenase DNQ11_20425 PF00175 Oxidoreductase NAD-binding domain DNQ11_20425 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B DNQ11_20430 PF02142 MGS-like domain DNQ11_20430 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DNQ11_20430 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DNQ11_20435 PF00117 Glutamine amidotransferase class-I DNQ11_20435 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DNQ11_20440 PF01979 Amidohydrolase family DNQ11_20445 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DNQ11_20445 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DNQ11_20450 PF00860 Permease family DNQ11_20455 PF00156 Phosphoribosyl transferase domain DNQ11_20460 PF01479 S4 domain DNQ11_20460 PF00849 RNA pseudouridylate synthase DNQ11_20465 PF01252 Signal peptidase (SPase) II DNQ11_20475 PF06827 Zinc finger found in FPG and IleRS DNQ11_20475 PF00133 tRNA synthetases class I (I, L, M and V) DNQ11_20475 PF08264 Anticodon-binding domain of tRNA DNQ11_20480 PF05103 DivIVA protein DNQ11_20485 PF17774 Putative RNA-binding domain in YlmH DNQ11_20485 PF01479 S4 domain DNQ11_20490 PF02325 YGGT family DNQ11_20495 PF04472 Cell division protein SepF DNQ11_20500 PF01168 Alanine racemase, N-terminal domain DNQ11_20510 PF05239 PRC-barrel domain DNQ11_20515 PF04542 Sigma-70 region 2 DNQ11_20515 PF04539 Sigma-70 region 3 DNQ11_20515 PF04545 Sigma-70, region 4 DNQ11_20520 PF04542 Sigma-70 region 2 DNQ11_20520 PF04545 Sigma-70, region 4 DNQ11_20525 PF03419 Sporulation factor SpoIIGA DNQ11_20530 PF12327 FtsZ family, C-terminal domain DNQ11_20530 PF00091 Tubulin/FtsZ family, GTPase domain DNQ11_20535 PF02491 SHS2 domain inserted in FTSA DNQ11_20540 PF03799 Cell division protein FtsQ DNQ11_20540 PF08478 POTRA domain, FtsQ-type DNQ11_20545 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DNQ11_20545 PF01565 FAD binding domain DNQ11_20550 PF03033 Glycosyltransferase family 28 N-terminal domain DNQ11_20550 PF04101 Glycosyltransferase family 28 C-terminal domain DNQ11_20555 PF01098 Cell cycle protein DNQ11_20560 PF08245 Mur ligase middle domain DNQ11_20560 PF02875 Mur ligase family, glutamate ligase domain DNQ11_20565 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DNQ11_20565 PF00953 Glycosyl transferase family 4 DNQ11_20570 PF08245 Mur ligase middle domain DNQ11_20570 PF02875 Mur ligase family, glutamate ligase domain DNQ11_20570 PF01225 Mur ligase family, catalytic domain DNQ11_20575 PF03717 Penicillin-binding Protein dimerisation domain DNQ11_20575 PF00905 Penicillin binding protein transpeptidase domain DNQ11_20575 PF03793 PASTA domain DNQ11_20585 PF04977 Septum formation initiator DNQ11_20590 PF01795 MraW methylase family DNQ11_20595 PF10079 Bacillithiol biosynthesis BshC DNQ11_20600 PF08546 Ketopantoate reductase PanE/ApbA C terminal DNQ11_20600 PF02558 Ketopantoate reductase PanE/ApbA DNQ11_20605 PF00583 Acetyltransferase (GNAT) family DNQ11_20615 PF01783 Ribosomal L32p protein family DNQ11_20620 PF02620 Large ribosomal RNA subunit accumulation protein YceD DNQ11_20665 PF12123 N-acetylmuramoyl-l-alanine amidase DNQ11_20665 PF01510 N-acetylmuramoyl-L-alanine amidase DNQ11_20670 PF05105 Bacteriophage holin family DNQ11_20750 PF00574 Clp protease DNQ11_20760 PF03354 Phage Terminase DNQ11_20780 PF10137 Predicted nucleotide-binding protein containing TIR-like domain DNQ11_20785 PF00589 Phage integrase family DNQ11_20845 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DNQ11_20875 PF04542 Sigma-70 region 2 DNQ11_20875 PF04539 Sigma-70 region 3 DNQ11_20875 PF04545 Sigma-70, region 4 DNQ11_20900 PF01695 IstB-like ATP binding protein DNQ11_20900 PF07319 Primosomal protein DnaI N-terminus DNQ11_20930 PF01381 Helix-turn-helix DNQ11_20950 PF01381 Helix-turn-helix DNQ11_20970 PF14659 Phage integrase, N-terminal SAM-like domain DNQ11_20970 PF00589 Phage integrase family DNQ11_20975 PF05636 HIGH Nucleotidyl Transferase DNQ11_20980 PF13180 PDZ domain DNQ11_20980 PF05362 Lon protease (S16) C-terminal proteolytic domain DNQ11_20985 PF01734 Patatin-like phospholipase DNQ11_20990 PF07670 Nucleoside recognition DNQ11_20995 PF01467 Cytidylyltransferase-like DNQ11_21010 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) DNQ11_21015 PF06133 Control of competence regulator ComK, YlbF/YmcA DNQ11_21020 PF00300 Histidine phosphatase superfamily (branch 1) DNQ11_21025 PF14003 YlbE-like protein DNQ11_21030 PF14071 Putative coat protein DNQ11_21035 PF00188 Cysteine-rich secretory protein family DNQ11_21035 PF14504 CAP-associated N-terminal DNQ11_21040 PF08868 YugN-like family DNQ11_21045 PF00795 Carbon-nitrogen hydrolase DNQ11_21050 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) DNQ11_21055 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DNQ11_21060 PF00510 Cytochrome c oxidase subunit III DNQ11_21065 PF00115 Cytochrome C and Quinol oxidase polypeptide I DNQ11_21070 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DNQ11_21070 PF00034 Cytochrome c DNQ11_21070 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DNQ11_21075 PF01040 UbiA prenyltransferase family DNQ11_21080 PF02628 Cytochrome oxidase assembly protein DNQ11_21085 PF02436 Conserved carboxylase domain DNQ11_21085 PF00289 Biotin carboxylase, N-terminal domain DNQ11_21085 PF00364 Biotin-requiring enzyme DNQ11_21085 PF02785 Biotin carboxylase C-terminal domain DNQ11_21085 PF00682 HMGL-like DNQ11_21085 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DNQ11_21095 PF01098 Cell cycle protein DNQ11_21100 PF07408 Protein of unknown function (DUF1507) DNQ11_21110 PF13638 PIN domain DNQ11_21110 PF02562 PhoH-like protein DNQ11_21120 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) DNQ11_21130 PF14036 YlaH-like protein DNQ11_21145 PF00459 Inositol monophosphatase family DNQ11_21155 PF06335 Protein of unknown function (DUF1054) DNQ11_21160 PF05256 Uncharacterised protein family (UPF0223) DNQ11_21165 PF01276 Orn/Lys/Arg decarboxylase, major domain DNQ11_21165 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DNQ11_21205 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNQ11_21205 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DNQ11_21210 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DNQ11_21210 PF02817 e3 binding domain DNQ11_21210 PF00364 Biotin-requiring enzyme DNQ11_21215 PF02779 Transketolase, pyrimidine binding domain DNQ11_21215 PF02780 Transketolase, C-terminal domain DNQ11_21220 PF00676 Dehydrogenase E1 component DNQ11_21230 PF01327 Polypeptide deformylase DNQ11_21250 PF00753 Metallo-beta-lactamase superfamily DNQ11_21250 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DNQ11_21250 PF17770 Ribonuclease J C-terminal domain DNQ11_21255 PF02254 TrkA-N domain DNQ11_21255 PF02080 TrkA-C domain DNQ11_21265 PF07687 Peptidase dimerisation domain DNQ11_21265 PF01546 Peptidase family M20/M25/M40 DNQ11_21270 PF00132 Bacterial transferase hexapeptide (six repeats) DNQ11_21270 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal DNQ11_21270 PF14602 Hexapeptide repeat of succinyl-transferase DNQ11_21275 PF03466 LysR substrate binding domain DNQ11_21275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNQ11_21290 PF04308 Ribonuclease H-like DNQ11_21300 PF08796 Protein of unknown function (DUF1797) DNQ11_21315 PF00563 EAL domain DNQ11_21315 PF10388 EAL-domain associated signalling protein domain DNQ11_21325 PF10518 TAT (twin-arginine translocation) pathway signal sequence DNQ11_21325 PF00149 Calcineurin-like phosphoesterase DNQ11_21340 PF13089 Polyphosphate kinase N-terminal domain DNQ11_21340 PF13090 Polyphosphate kinase C-terminal domain 2 DNQ11_21340 PF02503 Polyphosphate kinase middle domain DNQ11_21340 PF17941 Polyphosphate kinase C-terminal domain 1 DNQ11_21345 PF02541 Ppx/GppA phosphatase family DNQ11_21350 PF14177 YkyB-like protein DNQ11_21380 PF07690 Major Facilitator Superfamily DNQ11_21390 PF01717 Cobalamin-independent synthase, Catalytic domain DNQ11_21390 PF08267 Cobalamin-independent synthase, N-terminal domain DNQ11_21400 PF14040 Deoxyribonuclease NucA/NucB DNQ11_21415 PF00512 His Kinase A (phospho-acceptor) domain DNQ11_21415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_21425 PF00155 Aminotransferase class I and II DNQ11_21430 PF00356 Bacterial regulatory proteins, lacI family DNQ11_21430 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DNQ11_21435 PF00528 Binding-protein-dependent transport system inner membrane component DNQ11_21440 PF00528 Binding-protein-dependent transport system inner membrane component DNQ11_21445 PF13416 Bacterial extracellular solute-binding protein DNQ11_21450 PF00128 Alpha amylase, catalytic domain DNQ11_21450 PF16657 Maltogenic Amylase, C-terminal domain DNQ11_21450 PF02903 Alpha amylase, N-terminal ig-like domain DNQ11_21455 PF16657 Maltogenic Amylase, C-terminal domain DNQ11_21455 PF00128 Alpha amylase, catalytic domain DNQ11_21460 PF00005 ABC transporter DNQ11_21460 PF17912 MalK OB fold domain DNQ11_21460 PF03459 TOBE domain DNQ11_21500 PF02803 Thiolase, C-terminal domain DNQ11_21500 PF00108 Thiolase, N-terminal domain DNQ11_21505 PF00293 NUDIX domain DNQ11_21540 PF03551 Transcriptional regulator PadR-like family DNQ11_21560 PF01636 Phosphotransferase enzyme family DNQ11_21565 PF00795 Carbon-nitrogen hydrolase DNQ11_21570 PF00155 Aminotransferase class I and II DNQ11_21575 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain DNQ11_21575 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain DNQ11_21585 PF00596 Class II Aldolase and Adducin N-terminal domain DNQ11_21590 PF03079 ARD/ARD' family DNQ11_21615 PF00990 Diguanylate cyclase, GGDEF domain DNQ11_21620 PF00881 Nitroreductase family DNQ11_21635 PF00391 PEP-utilising enzyme, mobile domain DNQ11_21635 PF02896 PEP-utilising enzyme, TIM barrel domain DNQ11_21635 PF05524 PEP-utilising enzyme, N-terminal DNQ11_21640 PF00381 PTS HPr component phosphorylation site DNQ11_21645 PF00367 phosphotransferase system, EIIB DNQ11_21645 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DNQ11_21645 PF02378 Phosphotransferase system, EIIC DNQ11_21650 PF00874 PRD domain DNQ11_21650 PF03123 CAT RNA binding domain DNQ11_21665 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DNQ11_21670 PF01979 Amidohydrolase family DNQ11_21680 PF04079 Segregation and condensation complex subunit ScpB DNQ11_21690 PF02616 Segregation and condensation protein ScpA DNQ11_21700 PF03745 Domain of unknown function (DUF309) DNQ11_21705 PF00583 Acetyltransferase (GNAT) family DNQ11_21715 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DNQ11_21720 PF06207 Protein of unknown function (DUF1002) DNQ11_21730 PF03323 Bacillus/Clostridium GerA spore germination protein DNQ11_21735 PF14097 Stage V sporulation protein AE1 DNQ11_21740 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DNQ11_21745 PF07451 Stage V sporulation protein AD (SpoVAD) DNQ11_21750 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DNQ11_21755 PF13782 Stage V sporulation protein AB DNQ11_21760 PF12164 Stage V sporulation protein AA DNQ11_21770 PF00209 Sodium:neurotransmitter symporter family DNQ11_21775 PF04545 Sigma-70, region 4 DNQ11_21775 PF04539 Sigma-70 region 3 DNQ11_21775 PF04542 Sigma-70 region 2 DNQ11_21780 PF13581 Histidine kinase-like ATPase domain DNQ11_21785 PF01740 STAS domain DNQ11_21790 PF07943 Penicillin-binding protein 5, C-terminal domain DNQ11_21790 PF00768 D-alanyl-D-alanine carboxypeptidase DNQ11_21800 PF00392 Bacterial regulatory proteins, gntR family DNQ11_21805 PF00005 ABC transporter DNQ11_21825 PF01047 MarR family DNQ11_21835 PF00860 Permease family DNQ11_21840 PF01544 CorA-like Mg2+ transporter protein DNQ11_21845 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DNQ11_21845 PF00591 Glycosyl transferase family, a/b domain DNQ11_21845 PF02885 Glycosyl transferase family, helical bundle domain DNQ11_21850 PF01048 Phosphorylase superfamily DNQ11_21855 PF01676 Metalloenzyme superfamily DNQ11_21865 PF00589 Phage integrase family DNQ11_21865 PF02899 Phage integrase, N-terminal SAM-like domain DNQ11_21870 PF14004 Protein of unknown function (DUF4227) DNQ11_21875 PF01475 Ferric uptake regulator family DNQ11_21880 PF01944 Stage II sporulation protein M DNQ11_21890 PF00293 NUDIX domain DNQ11_21895 PF13072 Mother cell inhibitor of FtsZ DNQ11_21900 PF00248 Aldo/keto reductase family DNQ11_21905 PF00248 Aldo/keto reductase family DNQ11_21910 PF04229 GrpB protein DNQ11_21910 PF13673 Acetyltransferase (GNAT) domain DNQ11_21920 PF00746 LPXTG cell wall anchor motif DNQ11_21920 PF02872 5'-nucleotidase, C-terminal domain DNQ11_21920 PF00565 Staphylococcal nuclease homologue DNQ11_21920 PF00149 Calcineurin-like phosphoesterase DNQ11_21930 PF12146 Serine aminopeptidase, S33 DNQ11_21935 PF13726 Na+-H+ antiporter family DNQ11_21935 PF03553 Na+/H+ antiporter family DNQ11_21940 PF00356 Bacterial regulatory proteins, lacI family DNQ11_21945 PF00583 Acetyltransferase (GNAT) family DNQ11_21950 PF12146 Serine aminopeptidase, S33 DNQ11_21955 PF10827 Protein of unknown function (DUF2552) DNQ11_21965 PF01872 RibD C-terminal domain DNQ11_21965 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DNQ11_21970 PF00677 Lumazine binding domain DNQ11_21975 PF00925 GTP cyclohydrolase II DNQ11_21975 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DNQ11_21980 PF00885 6,7-dimethyl-8-ribityllumazine synthase DNQ11_21990 PF06968 Biotin and Thiamin Synthesis associated domain DNQ11_21990 PF04055 Radical SAM superfamily DNQ11_21995 PF13847 Methyltransferase domain DNQ11_22000 PF12697 Alpha/beta hydrolase family DNQ11_22000 PF08241 Methyltransferase domain DNQ11_22005 PF00155 Aminotransferase class I and II DNQ11_22015 PF00202 Aminotransferase class-III DNQ11_22035 PF00149 Calcineurin-like phosphoesterase DNQ11_22035 PF02872 5'-nucleotidase, C-terminal domain DNQ11_22045 PF01037 Lrp/AsnC ligand binding domain DNQ11_22045 PF13404 AsnC-type helix-turn-helix domain DNQ11_22060 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DNQ11_22060 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DNQ11_22065 PF00202 Aminotransferase class-III DNQ11_22070 PF00696 Amino acid kinase family DNQ11_22075 PF01960 ArgJ family DNQ11_22080 PF01118 Semialdehyde dehydrogenase, NAD binding domain DNQ11_22080 PF02774 Semialdehyde dehydrogenase, dimerisation domain DNQ11_22090 PF00106 short chain dehydrogenase DNQ11_22100 PF03807 NADP oxidoreductase coenzyme F420-dependent DNQ11_22100 PF14748 Pyrroline-5-carboxylate reductase dimerisation DNQ11_22105 PF03313 Serine dehydratase alpha chain DNQ11_22110 PF01842 ACT domain DNQ11_22110 PF03315 Serine dehydratase beta chain DNQ11_22120 PF12706 Beta-lactamase superfamily domain DNQ11_22120 PF00753 Metallo-beta-lactamase superfamily DNQ11_22135 PF00817 impB/mucB/samB family DNQ11_22135 PF11798 IMS family HHH motif DNQ11_22135 PF11799 impB/mucB/samB family C-terminal domain DNQ11_22145 PF07687 Peptidase dimerisation domain DNQ11_22145 PF01546 Peptidase family M20/M25/M40 DNQ11_22150 PF13302 Acetyltransferase (GNAT) domain DNQ11_22165 PF03734 L,D-transpeptidase catalytic domain DNQ11_22170 PF06081 Aromatic acid exporter family member 1 DNQ11_22170 PF11728 Putative aromatic acid exporter C-terminal domain DNQ11_22175 PF00005 ABC transporter DNQ11_22180 PF00528 Binding-protein-dependent transport system inner membrane component DNQ11_22185 PF00497 Bacterial extracellular solute-binding proteins, family 3 DNQ11_22195 PF06491 Disulphide isomerase DNQ11_22200 PF11208 Protein of unknown function (DUF2992) DNQ11_22205 PF09297 NADH pyrophosphatase zinc ribbon domain DNQ11_22205 PF00293 NUDIX domain DNQ11_22210 PF01098 Cell cycle protein DNQ11_22220 PF02817 e3 binding domain DNQ11_22220 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DNQ11_22220 PF00364 Biotin-requiring enzyme DNQ11_22225 PF02779 Transketolase, pyrimidine binding domain DNQ11_22225 PF02780 Transketolase, C-terminal domain DNQ11_22230 PF00676 Dehydrogenase E1 component DNQ11_22235 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DNQ11_22235 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNQ11_22240 PF00871 Acetokinase family DNQ11_22245 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DNQ11_22245 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DNQ11_22250 PF01515 Phosphate acetyl/butaryl transferase DNQ11_22260 PF00989 PAS fold DNQ11_22260 PF02954 Bacterial regulatory protein, Fis family DNQ11_22260 PF00158 Sigma-54 interaction domain DNQ11_22270 PF03009 Glycerophosphoryl diester phosphodiesterase family DNQ11_22275 PF14174 YycC-like protein DNQ11_22285 PF00072 Response regulator receiver domain DNQ11_22285 PF08769 Sporulation initiation factor Spo0A C terminal DNQ11_22295 PF17820 PDZ domain DNQ11_22295 PF05580 SpoIVB peptidase S55 DNQ11_22300 PF13476 AAA domain DNQ11_22305 PF01316 Arginine repressor, DNA binding domain DNQ11_22305 PF02863 Arginine repressor, C-terminal domain DNQ11_22310 PF01479 S4 domain DNQ11_22310 PF01728 FtsJ-like methyltransferase DNQ11_22315 PF02779 Transketolase, pyrimidine binding domain DNQ11_22315 PF02780 Transketolase, C-terminal domain DNQ11_22315 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DNQ11_22320 PF00348 Polyprenyl synthetase DNQ11_22325 PF02609 Exonuclease VII small subunit DNQ11_22330 PF13742 OB-fold nucleic acid binding domain DNQ11_22330 PF02601 Exonuclease VII, large subunit DNQ11_22335 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DNQ11_22335 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DNQ11_22340 PF01029 NusB family DNQ11_22345 PF03780 Asp23 family, cell envelope-related function DNQ11_22350 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DNQ11_22350 PF00289 Biotin carboxylase, N-terminal domain DNQ11_22350 PF02785 Biotin carboxylase C-terminal domain DNQ11_22355 PF00364 Biotin-requiring enzyme DNQ11_22365 PF12685 SpoIIIAH-like protein DNQ11_22375 PF09581 Stage III sporulation protein AF (Spore_III_AF) DNQ11_22380 PF09546 Stage III sporulation protein AE (spore_III_AE) DNQ11_22385 PF06686 Stage III sporulation protein AC/AD protein family DNQ11_22390 PF06686 Stage III sporulation protein AC/AD protein family DNQ11_22395 PF09548 Stage III sporulation protein AB (spore_III_AB) DNQ11_22420 PF01132 Elongation factor P (EF-P) OB domain DNQ11_22420 PF08207 Elongation factor P (EF-P) KOW-like domain DNQ11_22420 PF09285 Elongation factor P, C-terminal DNQ11_22425 PF00557 Metallopeptidase family M24 DNQ11_22425 PF01321 Creatinase/Prolidase N-terminal domain DNQ11_22430 PF01220 Dehydroquinase class II DNQ11_22435 PF11085 Conserved membrane protein YqhR DNQ11_22440 PF07136 Protein of unknown function (DUF1385) DNQ11_22450 PF13419 Haloacid dehalogenase-like hydrolase DNQ11_22455 PF01325 Iron dependent repressor, N-terminal DNA binding domain DNQ11_22455 PF02742 Iron dependent repressor, metal binding and dimerisation domain DNQ11_22470 PF03099 Biotin/lipoate A/B protein ligase family DNQ11_22475 PF00581 Rhodanese-like domain DNQ11_22480 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DNQ11_22480 PF00356 Bacterial regulatory proteins, lacI family DNQ11_22490 PF00893 Small Multidrug Resistance protein DNQ11_22495 PF00893 Small Multidrug Resistance protein DNQ11_22535 PF00005 ABC transporter DNQ11_22540 PF00392 Bacterial regulatory proteins, gntR family DNQ11_22560 PF02347 Glycine cleavage system P-protein DNQ11_22565 PF02347 Glycine cleavage system P-protein DNQ11_22570 PF01571 Aminomethyltransferase folate-binding domain DNQ11_22570 PF08669 Glycine cleavage T-protein C-terminal barrel domain DNQ11_22575 PF00271 Helicase conserved C-terminal domain DNQ11_22575 PF00176 SNF2 family N-terminal domain DNQ11_22580 PF11079 Bacterial protein YqhG of unknown function DNQ11_22605 PF14038 YqzE-like protein DNQ11_22610 PF01202 Shikimate kinase DNQ11_22635 PF07963 Prokaryotic N-terminal methylation motif DNQ11_22645 PF00482 Type II secretion system (T2SS), protein F DNQ11_22650 PF00437 Type II/IV secretion system protein DNQ11_22660 PF11117 Protein of unknown function (DUF2626) DNQ11_22665 PF00375 Sodium:dicarboxylate symporter family DNQ11_22700 PF03033 Glycosyltransferase family 28 N-terminal domain DNQ11_22700 PF04101 Glycosyltransferase family 28 C-terminal domain DNQ11_22705 PF02574 Homocysteine S-methyltransferase DNQ11_22705 PF00809 Pterin binding enzyme DNQ11_22705 PF02607 B12 binding domain DNQ11_22705 PF02965 Vitamin B12 dependent methionine synthase, activation domain DNQ11_22705 PF02310 B12 binding domain DNQ11_22710 PF02219 Methylenetetrahydrofolate reductase DNQ11_22710 PF02574 Homocysteine S-methyltransferase DNQ11_22715 PF01053 Cys/Met metabolism PLP-dependent enzyme DNQ11_22720 PF01053 Cys/Met metabolism PLP-dependent enzyme DNQ11_22730 PF01022 Bacterial regulatory protein, arsR family DNQ11_22740 PF00753 Metallo-beta-lactamase superfamily DNQ11_22745 PF10958 Protein of unknown function (DUF2759) DNQ11_22750 PF00480 ROK family DNQ11_22755 PF06014 Bacterial protein of unknown function (DUF910) DNQ11_22760 PF01812 5-formyltetrahydrofolate cyclo-ligase family DNQ11_22765 PF00471 Ribosomal protein L33 DNQ11_22770 PF00483 Nucleotidyl transferase DNQ11_22775 PF01895 PhoU domain DNQ11_22780 PF00005 ABC transporter DNQ11_22785 PF00528 Binding-protein-dependent transport system inner membrane component DNQ11_22790 PF00528 Binding-protein-dependent transport system inner membrane component DNQ11_22795 PF12849 PBP superfamily domain DNQ11_22805 PF07690 Major Facilitator Superfamily DNQ11_22810 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DNQ11_22810 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DNQ11_22830 PF04551 GcpE protein DNQ11_22835 PF01475 Ferric uptake regulator family DNQ11_22840 PF00950 ABC 3 transport family DNQ11_22845 PF00005 ABC transporter DNQ11_22850 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DNQ11_22850 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DNQ11_22855 PF11116 Protein of unknown function (DUF2624) DNQ11_22860 PF01261 Xylose isomerase-like TIM barrel DNQ11_22865 PF00270 DEAD/DEAH box helicase DNQ11_22865 PF00271 Helicase conserved C-terminal domain DNQ11_22875 PF02401 LytB protein DNQ11_22880 PF01784 NIF3 (NGG1p interacting factor 3) DNQ11_22885 PF04816 tRNA (adenine(22)-N(1))-methyltransferase DNQ11_22890 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DNQ11_22895 PF04545 Sigma-70, region 4 DNQ11_22895 PF04539 Sigma-70 region 3 DNQ11_22895 PF04542 Sigma-70 region 2 DNQ11_22895 PF00140 Sigma-70 factor, region 1.2 DNQ11_22895 PF03979 Sigma-70 factor, region 1.1 DNQ11_22900 PF01807 CHC2 zinc finger DNQ11_22900 PF08275 DNA primase catalytic core, N-terminal domain DNQ11_22900 PF10410 DnaB-helicase binding domain of primase DNQ11_22915 PF03618 Kinase/pyrophosphorylase DNQ11_22920 PF08279 HTH domain DNQ11_22920 PF00571 CBS domain DNQ11_22925 PF02565 Recombination protein O C terminal DNQ11_22925 PF11967 Recombination protein O N terminal DNQ11_22935 PF07650 KH domain DNQ11_22935 PF01926 50S ribosome-binding GTPase DNQ11_22940 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DNQ11_22945 PF01219 Prokaryotic diacylglycerol kinase DNQ11_22950 PF02130 Uncharacterized protein family UPF0054 DNQ11_22955 PF07698 7TM receptor with intracellular HD hydrolase DNQ11_22955 PF07697 7TM-HD extracellular DNQ11_22955 PF01966 HD domain DNQ11_22960 PF02562 PhoH-like protein DNQ11_22965 PF06898 Putative stage IV sporulation protein YqfD DNQ11_22975 PF07873 YabP family DNQ11_22980 PF09424 Yqey-like protein DNQ11_22985 PF01165 Ribosomal protein S21 DNQ11_22995 PF01938 TRAM domain DNQ11_22995 PF00919 Uncharacterized protein family UPF0004 DNQ11_22995 PF04055 Radical SAM superfamily DNQ11_23000 PF04452 RNA methyltransferase DNQ11_23010 PF00226 DnaJ domain DNQ11_23010 PF01556 DnaJ C terminal domain DNQ11_23010 PF00684 DnaJ central domain DNQ11_23015 PF00012 Hsp70 protein DNQ11_23020 PF01025 GrpE DNQ11_23025 PF01628 HrcA protein C terminal domain DNQ11_23030 PF06969 HemN C-terminal domain DNQ11_23030 PF04055 Radical SAM superfamily DNQ11_23035 PF01638 HxlR-like helix-turn-helix DNQ11_23040 PF00679 Elongation factor G C-terminus DNQ11_23040 PF06421 GTP-binding protein LepA C-terminus DNQ11_23040 PF03144 Elongation factor Tu domain 2 DNQ11_23040 PF00009 Elongation factor Tu GTP binding domain DNQ11_23050 PF03418 Germination protease DNQ11_23055 PF01649 Ribosomal protein S20 DNQ11_23060 PF06144 DNA polymerase III, delta subunit DNQ11_23065 PF14141 YqzM-like protein DNQ11_23070 PF03772 Competence protein DNQ11_23070 PF13567 Domain of unknown function (DUF4131) DNQ11_23070 PF00753 Metallo-beta-lactamase superfamily DNQ11_23075 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DNQ11_23080 PF10531 SLBB domain DNQ11_23085 PF14748 Pyrroline-5-carboxylate reductase dimerisation DNQ11_23085 PF03807 NADP oxidoreductase coenzyme F420-dependent DNQ11_23090 PF13649 Methyltransferase domain DNQ11_23100 PF01966 HD domain DNQ11_23105 PF01467 Cytidylyltransferase-like DNQ11_23110 PF01985 CRS1 / YhbY (CRM) domain DNQ11_23115 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DNQ11_23115 PF01488 Shikimate / quinate 5-dehydrogenase DNQ11_23115 PF08501 Shikimate dehydrogenase substrate binding domain DNQ11_23120 PF01926 50S ribosome-binding GTPase DNQ11_23135 PF02666 Phosphatidylserine decarboxylase DNQ11_23140 PF04545 Sigma-70, region 4 DNQ11_23140 PF04542 Sigma-70 region 2 DNQ11_23155 PF16244 Domain of unknown function (DUF4901) DNQ11_23160 PF00471 Ribosomal protein L33 DNQ11_23165 PF00881 Nitroreductase family DNQ11_23170 PF04607 Region found in RelA / SpoT proteins DNQ11_23180 PF00245 Alkaline phosphatase DNQ11_23190 PF00561 alpha/beta hydrolase fold DNQ11_23190 PF08386 TAP-like protein DNQ11_23225 PF13860 FlgD Ig-like domain DNQ11_23225 PF05922 Peptidase inhibitor I9 DNQ11_23225 PF02225 PA domain DNQ11_23225 PF00082 Subtilase family DNQ11_23230 PF00351 Biopterin-dependent aromatic amino acid hydroxylase DNQ11_23245 PF07681 DoxX DNQ11_23275 PF00005 ABC transporter DNQ11_23280 PF01032 FecCD transport family DNQ11_23285 PF01497 Periplasmic binding protein DNQ11_23290 PF14143 YrhC-like protein DNQ11_23295 PF00171 Aldehyde dehydrogenase family DNQ11_23295 PF00465 Iron-containing alcohol dehydrogenase DNQ11_23300 PF01053 Cys/Met metabolism PLP-dependent enzyme DNQ11_23305 PF00291 Pyridoxal-phosphate dependent enzyme DNQ11_23310 PF01048 Phosphorylase superfamily DNQ11_23315 PF08241 Methyltransferase domain DNQ11_23330 PF03717 Penicillin-binding Protein dimerisation domain DNQ11_23330 PF00905 Penicillin binding protein transpeptidase domain DNQ11_23335 PF01272 Transcription elongation factor, GreA/GreB, C-term DNQ11_23335 PF03449 Transcription elongation factor, N-terminal DNQ11_23340 PF00485 Phosphoribulokinase / Uridine kinase family DNQ11_23360 PF02618 YceG-like family DNQ11_23365 PF06949 Protein of unknown function (DUF1292) DNQ11_23370 PF03652 Holliday junction resolvase DNQ11_23375 PF06135 IreB regulatory phosphoprotein DNQ11_23380 PF02272 DHHA1 domain DNQ11_23380 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DNQ11_23380 PF01411 tRNA synthetases class II (A) DNQ11_23390 PF01594 AI-2E family transporter DNQ11_23410 PF14490 Helix-hairpin-helix containing domain DNQ11_23410 PF13538 UvrD-like helicase C-terminal domain DNQ11_23410 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain DNQ11_23425 PF00266 Aminotransferase class-V DNQ11_23430 PF02082 Transcriptional regulator DNQ11_23435 PF16193 AAA C-terminal domain DNQ11_23435 PF05496 Holliday junction DNA helicase RuvB P-loop domain DNQ11_23435 PF12002 MgsA AAA+ ATPase C terminal DNQ11_23445 PF00899 ThiF family DNQ11_23450 PF01336 OB-fold nucleic acid binding domain DNQ11_23450 PF00152 tRNA synthetases class II (D, K and N) DNQ11_23450 PF02938 GAD domain DNQ11_23455 PF03129 Anticodon binding domain DNQ11_23455 PF13393 Histidyl-tRNA synthetase DNQ11_23470 PF02580 D-Tyr-tRNA(Tyr) deacylase DNQ11_23475 PF04607 Region found in RelA / SpoT proteins DNQ11_23475 PF13291 ACT domain DNQ11_23475 PF02824 TGS domain DNQ11_23480 PF00156 Phosphoribosyl transferase domain DNQ11_23485 PF02272 DHHA1 domain DNQ11_23485 PF01368 DHH family DNQ11_23485 PF10141 Single-strand DNA-specific exonuclease, C terminal domain DNQ11_23485 PF17768 RecJ OB domain DNQ11_23490 PF01545 Cation efflux family DNQ11_23490 PF16916 Dimerisation domain of Zinc Transporter DNQ11_23495 PF07549 SecD/SecF GG Motif DNQ11_23495 PF02355 Protein export membrane protein DNQ11_23500 PF13797 Post-transcriptional regulator DNQ11_23505 PF01943 Polysaccharide biosynthesis protein DNQ11_23505 PF14667 Polysaccharide biosynthesis C-terminal domain DNQ11_23510 PF04239 Protein of unknown function (DUF421) DNQ11_23520 PF02699 Preprotein translocase subunit DNQ11_23525 PF01702 Queuine tRNA-ribosyltransferase DNQ11_23530 PF02547 Queuosine biosynthesis protein DNQ11_23535 PF11146 Protein of unknown function (DUF2905) DNQ11_23540 PF05491 RuvB C-terminal winged helix domain DNQ11_23540 PF17864 RuvB AAA lid domain DNQ11_23540 PF05496 Holliday junction DNA helicase RuvB P-loop domain DNQ11_23545 PF07499 RuvA, C-terminal domain DNQ11_23545 PF01330 RuvA N terminal domain DNQ11_23550 PF01497 Periplasmic binding protein DNQ11_23560 PF00892 EamA-like transporter family DNQ11_23565 PF00892 EamA-like transporter family DNQ11_23570 PF01022 Bacterial regulatory protein, arsR family DNQ11_23585 PF01476 LysM domain DNQ11_23590 PF02445 Quinolinate synthetase A protein DNQ11_23595 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DNQ11_23595 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DNQ11_23600 PF02910 Fumarate reductase flavoprotein C-term DNQ11_23600 PF00890 FAD binding domain DNQ11_23605 PF00266 Aminotransferase class-V DNQ11_23610 PF02829 3H domain DNQ11_23610 PF08279 HTH domain DNQ11_23615 PF03475 3-alpha domain DNQ11_23615 PF03473 MOSC domain DNQ11_23620 PF00800 Prephenate dehydratase DNQ11_23620 PF01842 ACT domain DNQ11_23625 PF02687 FtsX-like permease family DNQ11_23630 PF02687 FtsX-like permease family DNQ11_23635 PF00005 ABC transporter DNQ11_23645 PF00486 Transcriptional regulatory protein, C terminal DNQ11_23645 PF00072 Response regulator receiver domain DNQ11_23650 PF01926 50S ribosome-binding GTPase DNQ11_23650 PF09269 Domain of unknown function (DUF1967) DNQ11_23650 PF01018 GTP1/OBG DNQ11_23655 PF14682 Sporulation initiation phospho-transferase B, C-terminal DNQ11_23655 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DNQ11_23660 PF01016 Ribosomal L27 protein DNQ11_23665 PF04327 Cysteine protease Prp DNQ11_23670 PF00829 Ribosomal prokaryotic L21 protein DNQ11_23675 PF00575 S1 RNA binding domain DNQ11_23675 PF10150 Ribonuclease E/G family DNQ11_23680 PF02163 Peptidase family M50 DNQ11_23685 PF01551 Peptidase family M23 DNQ11_23690 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DNQ11_23695 PF03775 Septum formation inhibitor MinC, C-terminal domain DNQ11_23705 PF04085 rod shape-determining protein MreC DNQ11_23715 PF04002 RadC-like JAB domain DNQ11_23720 PF02545 Maf-like protein DNQ11_23735 PF08245 Mur ligase middle domain DNQ11_23735 PF02875 Mur ligase family, glutamate ligase domain DNQ11_23740 PF10458 Valyl tRNA synthetase tRNA binding arm DNQ11_23740 PF08264 Anticodon-binding domain of tRNA DNQ11_23740 PF00133 tRNA synthetases class I (I, L, M and V) DNQ11_23750 PF01476 LysM domain DNQ11_23755 PF00202 Aminotransferase class-III DNQ11_23760 PF00490 Delta-aminolevulinic acid dehydratase DNQ11_23765 PF02602 Uroporphyrinogen-III synthase HemD DNQ11_23770 PF03900 Porphobilinogen deaminase, C-terminal domain DNQ11_23770 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DNQ11_23775 PF01578 Cytochrome C assembly protein DNQ11_23780 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DNQ11_23780 PF01488 Shikimate / quinate 5-dehydrogenase DNQ11_23780 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DNQ11_23785 PF01047 MarR family DNQ11_23790 PF02566 OsmC-like protein DNQ11_23795 PF01926 50S ribosome-binding GTPase DNQ11_23800 PF02190 ATP-dependent protease La (LON) substrate-binding domain DNQ11_23800 PF00004 ATPase family associated with various cellular activities (AAA) DNQ11_23800 PF05362 Lon protease (S16) C-terminal proteolytic domain DNQ11_23805 PF05362 Lon protease (S16) C-terminal proteolytic domain DNQ11_23805 PF00004 ATPase family associated with various cellular activities (AAA) DNQ11_23810 PF10431 C-terminal, D2-small domain, of ClpB protein DNQ11_23810 PF06689 ClpX C4-type zinc finger DNQ11_23810 PF07724 AAA domain (Cdc48 subfamily) DNQ11_23815 PF05697 Bacterial trigger factor protein (TF) DNQ11_23815 PF05698 Bacterial trigger factor protein (TF) C-terminus DNQ11_23815 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DNQ11_23835 PF08000 Bacterial PH domain DNQ11_23835 PF11724 YvbH-like oligomerisation region DNQ11_23860 PF12850 Calcineurin-like phosphoesterase superfamily domain DNQ11_23865 PF01725 Ham1 family DNQ11_23870 PF03725 3' exoribonuclease family, domain 2 DNQ11_23870 PF01138 3' exoribonuclease family, domain 1 DNQ11_23875 PF10646 Sporulation and spore germination DNQ11_23880 PF01177 Asp/Glu/Hydantoin racemase DNQ11_23895 PF00440 Bacterial regulatory proteins, tetR family DNQ11_23910 PF00196 Bacterial regulatory proteins, luxR family DNQ11_23915 PF00860 Permease family DNQ11_23925 PF07969 Amidohydrolase family DNQ11_23930 PF07969 Amidohydrolase family DNQ11_23935 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DNQ11_23945 PF00528 Binding-protein-dependent transport system inner membrane component DNQ11_23950 PF00005 ABC transporter DNQ11_23950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DNQ11_23955 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DNQ11_23955 PF00005 ABC transporter DNQ11_23965 PF04397 LytTr DNA-binding domain DNQ11_23965 PF00072 Response regulator receiver domain DNQ11_23980 PF04024 PspC domain DNQ11_23985 PF01381 Helix-turn-helix DNQ11_23985 PF07883 Cupin domain DNQ11_23990 PF13536 Putative multidrug resistance efflux transporter DNQ11_23995 PF00230 Major intrinsic protein DNQ11_24000 PF02082 Transcriptional regulator DNQ11_24010 PF13732 Domain of unknown function (DUF4162) DNQ11_24010 PF00005 ABC transporter DNQ11_24015 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) DNQ11_24025 PF01618 MotA/TolQ/ExbB proton channel family DNQ11_24030 PF02557 D-alanyl-D-alanine carboxypeptidase DNQ11_24035 PF03061 Thioesterase superfamily DNQ11_24040 PF13183 4Fe-4S dicluster domain DNQ11_24040 PF13085 2Fe-2S iron-sulfur cluster binding domain DNQ11_24045 PF02910 Fumarate reductase flavoprotein C-term DNQ11_24045 PF00890 FAD binding domain DNQ11_24050 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DNQ11_24055 PF10702 Protein of unknown function (DUF2507) DNQ11_24060 PF08459 UvrC Helix-hairpin-helix N-terminal DNQ11_24060 PF02151 UvrB/uvrC motif DNQ11_24060 PF01541 GIY-YIG catalytic domain DNQ11_24065 PF00085 Thioredoxin DNQ11_24070 PF00766 Electron transfer flavoprotein FAD-binding domain DNQ11_24070 PF01012 Electron transfer flavoprotein domain DNQ11_24075 PF01012 Electron transfer flavoprotein domain DNQ11_24080 PF00378 Enoyl-CoA hydratase/isomerase DNQ11_24085 PF08359 YsiA-like protein, C-terminal region DNQ11_24085 PF00440 Bacterial regulatory proteins, tetR family DNQ11_24090 PF00501 AMP-binding enzyme DNQ11_24090 PF13193 AMP-binding enzyme C-terminal domain DNQ11_24105 PF01497 Periplasmic binding protein DNQ11_24110 PF01032 FecCD transport family DNQ11_24115 PF05163 DinB family DNQ11_24145 PF00005 ABC transporter DNQ11_24150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_24150 PF00512 His Kinase A (phospho-acceptor) domain DNQ11_24155 PF00072 Response regulator receiver domain DNQ11_24155 PF00486 Transcriptional regulatory protein, C terminal DNQ11_24165 PF09962 Uncharacterized conserved protein (DUF2196) DNQ11_24170 PF17785 PUA-like domain DNQ11_24170 PF10672 S-adenosylmethionine-dependent methyltransferase DNQ11_24180 PF03992 Antibiotic biosynthesis monooxygenase DNQ11_24185 PF04203 Sortase domain DNQ11_24190 PF00005 ABC transporter DNQ11_24195 PF01032 FecCD transport family DNQ11_24200 PF01497 Periplasmic binding protein DNQ11_24205 PF05031 Iron Transport-associated domain DNQ11_24215 PF05031 Iron Transport-associated domain DNQ11_24220 PF05525 Branched-chain amino acid transport protein DNQ11_24225 PF00849 RNA pseudouridylate synthase DNQ11_24225 PF01479 S4 domain DNQ11_24235 PF00488 MutS domain V DNQ11_24235 PF01713 Smr domain DNQ11_24240 PF02811 PHP domain DNQ11_24240 PF14791 DNA polymerase beta thumb DNQ11_24240 PF14716 Helix-hairpin-helix domain DNQ11_24245 PF02674 Colicin V production protein DNQ11_24250 PF05164 Cell division protein ZapA DNQ11_24255 PF01351 Ribonuclease HII DNQ11_24255 PF11858 Domain of unknown function (DUF3378) DNQ11_24275 PF00152 tRNA synthetases class II (D, K and N) DNQ11_24275 PF01336 OB-fold nucleic acid binding domain DNQ11_24280 PF03147 Ferredoxin-fold anticodon binding domain DNQ11_24280 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DNQ11_24280 PF03483 B3/4 domain DNQ11_24280 PF03484 tRNA synthetase B5 domain DNQ11_24280 PF01588 Putative tRNA binding domain DNQ11_24285 PF01409 tRNA synthetases class II core domain (F) DNQ11_24285 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DNQ11_24290 PF08032 RNA 2'-O ribose methyltransferase substrate binding DNQ11_24290 PF00588 SpoU rRNA Methylase family DNQ11_24295 PF14098 Small, acid-soluble spore protein I DNQ11_24300 PF01966 HD domain DNQ11_24325 PF07690 Major Facilitator Superfamily DNQ11_24335 PF00440 Bacterial regulatory proteins, tetR family DNQ11_24335 PF16859 Tetracyclin repressor-like, C-terminal domain DNQ11_24340 PF05343 M42 glutamyl aminopeptidase DNQ11_24350 PF00453 Ribosomal protein L20 DNQ11_24355 PF01632 Ribosomal protein L35 DNQ11_24360 PF00707 Translation initiation factor IF-3, C-terminal domain DNQ11_24360 PF05198 Translation initiation factor IF-3, N-terminal domain DNQ11_24365 PF03129 Anticodon binding domain DNQ11_24365 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DNQ11_24365 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DNQ11_24365 PF02824 TGS domain DNQ11_24370 PF08812 YtxC-like family DNQ11_24375 PF01695 IstB-like ATP binding protein DNQ11_24375 PF07319 Primosomal protein DnaI N-terminus DNQ11_24380 PF07261 Replication initiation and membrane attachment DNQ11_24385 PF03477 ATP cone domain DNQ11_24390 PF02675 S-adenosylmethionine decarboxylase DNQ11_24400 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DNQ11_24400 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DNQ11_24405 PF01121 Dephospho-CoA kinase DNQ11_24410 PF02659 Putative manganese efflux pump DNQ11_24415 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DNQ11_24415 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DNQ11_24415 PF06827 Zinc finger found in FPG and IleRS DNQ11_24420 PF01367 5'-3' exonuclease, C-terminal SAM fold DNQ11_24420 PF00476 DNA polymerase family A DNQ11_24420 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DNQ11_24425 PF16736 Single Cache-like DNQ11_24425 PF00989 PAS fold DNQ11_24425 PF00512 His Kinase A (phospho-acceptor) domain DNQ11_24425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_24430 PF00072 Response regulator receiver domain DNQ11_24430 PF00486 Transcriptional regulatory protein, C terminal DNQ11_24450 PF00056 lactate/malate dehydrogenase, NAD binding domain DNQ11_24450 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DNQ11_24455 PF00180 Isocitrate/isopropylmalate dehydrogenase DNQ11_24460 PF00285 Citrate synthase, C-terminal domain DNQ11_24470 PF04284 Protein of unknown function (DUF441) DNQ11_24475 PF01594 AI-2E family transporter DNQ11_24480 PF04186 FxsA cytoplasmic membrane protein DNQ11_24485 PF00391 PEP-utilising enzyme, mobile domain DNQ11_24485 PF00224 Pyruvate kinase, barrel domain DNQ11_24485 PF02887 Pyruvate kinase, alpha/beta domain DNQ11_24490 PF00365 Phosphofructokinase DNQ11_24495 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DNQ11_24500 PF01039 Carboxyl transferase domain DNQ11_24500 PF17848 Acetyl-coA carboxylase zinc finger domain DNQ11_24505 PF00392 Bacterial regulatory proteins, gntR family DNQ11_24510 PF03949 Malic enzyme, NAD binding domain DNQ11_24510 PF00390 Malic enzyme, N-terminal domain DNQ11_24515 PF07733 Bacterial DNA polymerase III alpha NTPase domain DNQ11_24515 PF02811 PHP domain DNQ11_24515 PF14579 Helix-hairpin-helix motif DNQ11_24515 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DNQ11_24515 PF01336 OB-fold nucleic acid binding domain DNQ11_24520 PF14034 Sporulation protein YtrH DNQ11_24530 PF01368 DHH family DNQ11_24530 PF02272 DHHA1 domain DNQ11_24540 PF14007 YtpI-like protein DNQ11_24555 PF03061 Thioesterase superfamily DNQ11_24555 PF07085 DRTGG domain DNQ11_24555 PF00392 Bacterial regulatory proteins, gntR family DNQ11_24555 PF00571 CBS domain DNQ11_24570 PF01321 Creatinase/Prolidase N-terminal domain DNQ11_24570 PF00557 Metallopeptidase family M24 DNQ11_24575 PF11518 Protein of unknown function (DUF3221) DNQ11_24610 PF12746 GNAT acetyltransferase DNQ11_24615 PF07883 Cupin domain DNQ11_24625 PF01381 Helix-turn-helix DNQ11_24635 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DNQ11_24635 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DNQ11_24645 PF00582 Universal stress protein family DNQ11_24665 PF14698 Argininosuccinate lyase C-terminal DNQ11_24665 PF00206 Lyase DNQ11_24670 PF00764 Arginosuccinate synthase DNQ11_24695 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DNQ11_24695 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DNQ11_24700 PF12787 EcsC protein family DNQ11_24715 PF00871 Acetokinase family DNQ11_24720 PF02384 N-6 DNA Methylase DNQ11_24725 PF08534 Redoxin DNQ11_24730 PF09579 Sporulation protein YtfJ (Spore_YtfJ) DNQ11_24740 PF01513 ATP-NAD kinase DNQ11_24745 PF07969 Amidohydrolase family DNQ11_24755 PF00501 AMP-binding enzyme DNQ11_24755 PF13193 AMP-binding enzyme C-terminal domain DNQ11_24760 PF00269 Small, acid-soluble spore proteins, alpha/beta type DNQ11_24765 PF02568 Thiamine biosynthesis protein (ThiI) DNQ11_24765 PF02926 THUMP domain DNQ11_24770 PF00266 Aminotransferase class-V DNQ11_24775 PF06160 Septation ring formation regulator, EzrA DNQ11_24780 PF03466 LysR substrate binding domain DNQ11_24780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNQ11_24785 PF00892 EamA-like transporter family DNQ11_24795 PF13185 GAF domain DNQ11_24800 PF01053 Cys/Met metabolism PLP-dependent enzyme DNQ11_24810 PF00163 Ribosomal protein S4/S9 N-terminal domain DNQ11_24810 PF01479 S4 domain DNQ11_24825 PF00579 tRNA synthetases class I (W and Y) DNQ11_24825 PF01479 S4 domain DNQ11_24835 PF04542 Sigma-70 region 2 DNQ11_24835 PF08281 Sigma-70, region 4 DNQ11_24850 PF13193 AMP-binding enzyme C-terminal domain DNQ11_24850 PF00501 AMP-binding enzyme DNQ11_24855 PF00583 Acetyltransferase (GNAT) family DNQ11_24860 PF00571 CBS domain DNQ11_24865 PF00850 Histone deacetylase domain DNQ11_24875 PF00072 Response regulator receiver domain DNQ11_24875 PF00486 Transcriptional regulatory protein, C terminal DNQ11_24880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_24880 PF13426 PAS domain DNQ11_24880 PF00672 HAMP domain DNQ11_24880 PF00512 His Kinase A (phospho-acceptor) domain DNQ11_24885 PF12796 Ankyrin repeats (3 copies) DNQ11_24890 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DNQ11_24895 PF01741 Large-conductance mechanosensitive channel, MscL DNQ11_24920 PF00356 Bacterial regulatory proteins, lacI family DNQ11_24930 PF07537 CamS sex pheromone cAM373 precursor DNQ11_24935 PF11009 Protein of unknown function (DUF2847) DNQ11_24945 PF02073 Thermophilic metalloprotease (M29) DNQ11_24965 PF13302 Acetyltransferase (GNAT) domain DNQ11_24970 PF08245 Mur ligase middle domain DNQ11_24970 PF02875 Mur ligase family, glutamate ligase domain DNQ11_24970 PF01225 Mur ligase family, catalytic domain DNQ11_24980 PF09397 Ftsk gamma domain DNQ11_24980 PF17854 FtsK alpha domain DNQ11_24980 PF01580 FtsK/SpoIIIE family DNQ11_24990 PF14794 Domain of unknown function (DUF4479) DNQ11_24990 PF01588 Putative tRNA binding domain DNQ11_24995 PF07285 Protein of unknown function (DUF1444) DNQ11_25000 PF00085 Thioredoxin DNQ11_25005 PF01931 Protein of unknown function DUF84 DNQ11_25010 PF05343 M42 glutamyl aminopeptidase DNQ11_25020 PF00753 Metallo-beta-lactamase superfamily DNQ11_25025 PF02390 Putative methyltransferase DNQ11_25030 PF14165 YtzH-like protein DNQ11_25035 PF01636 Phosphotransferase enzyme family DNQ11_25040 PF17999 Pullulanase N1-terminal domain DNQ11_25040 PF00128 Alpha amylase, catalytic domain DNQ11_25040 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DNQ11_25050 PF02834 LigT like Phosphoesterase DNQ11_25060 PF08220 DeoR-like helix-turn-helix domain DNQ11_25065 PF00849 RNA pseudouridylate synthase DNQ11_25065 PF01479 S4 domain DNQ11_25070 PF14667 Polysaccharide biosynthesis C-terminal domain DNQ11_25070 PF01943 Polysaccharide biosynthesis protein DNQ11_25080 PF07690 Major Facilitator Superfamily DNQ11_25085 PF01022 Bacterial regulatory protein, arsR family DNQ11_25090 PF08327 Activator of Hsp90 ATPase homolog 1-like protein DNQ11_25105 PF10957 Sporulation protein Cse60 DNQ11_25115 PF02559 CarD-like/TRCF domain DNQ11_25125 PF06800 Sugar transport protein DNQ11_25140 PF02391 MoaE protein DNQ11_25145 PF03205 Molybdopterin guanine dinucleotide synthesis protein B DNQ11_25150 PF00994 Probable molybdopterin binding domain DNQ11_25150 PF03454 MoeA C-terminal region (domain IV) DNQ11_25150 PF03453 MoeA N-terminal region (domain I and II) DNQ11_25155 PF01967 MoaC family DNQ11_25160 PF00899 ThiF family DNQ11_25185 PF00581 Rhodanese-like domain DNQ11_25195 PF00561 alpha/beta hydrolase fold DNQ11_25200 PF03323 Bacillus/Clostridium GerA spore germination protein DNQ11_25205 PF03845 Spore germination protein DNQ11_25235 PF08264 Anticodon-binding domain of tRNA DNQ11_25235 PF00133 tRNA synthetases class I (I, L, M and V) DNQ11_25235 PF13603 Leucyl-tRNA synthetase, Domain 2 DNQ11_25235 PF09334 tRNA synthetases class I (M) DNQ11_25240 PF07690 Major Facilitator Superfamily DNQ11_25245 PF00999 Sodium/hydrogen exchanger family DNQ11_25250 PF02080 TrkA-C domain DNQ11_25255 PF00589 Phage integrase family DNQ11_25265 PF00005 ABC transporter DNQ11_25270 PF07786 Protein of unknown function (DUF1624) DNQ11_25270 PF04235 Protein of unknown function (DUF418) DNQ11_25280 PF10732 Protein of unknown function (DUF2524) DNQ11_25285 PF04055 Radical SAM superfamily DNQ11_25285 PF16199 Radical_SAM C-terminal domain DNQ11_25290 PF06962 Putative rRNA methylase DNQ11_25300 PF13732 Domain of unknown function (DUF4162) DNQ11_25300 PF00005 ABC transporter DNQ11_25310 PF01177 Asp/Glu/Hydantoin racemase DNQ11_25330 PF10776 Protein of unknown function (DUF2600) DNQ11_25335 PF12146 Serine aminopeptidase, S33 DNQ11_25340 PF00132 Bacterial transferase hexapeptide (six repeats) DNQ11_25345 PF01569 PAP2 superfamily DNQ11_25350 PF00534 Glycosyl transferases group 1 DNQ11_25350 PF13439 Glycosyltransferase Family 4 DNQ11_25355 PF12804 MobA-like NTP transferase domain DNQ11_25360 PF00994 Probable molybdopterin binding domain DNQ11_25375 PF00438 S-adenosylmethionine synthetase, N-terminal domain DNQ11_25375 PF02772 S-adenosylmethionine synthetase, central domain DNQ11_25375 PF02773 S-adenosylmethionine synthetase, C-terminal domain DNQ11_25385 PF01293 Phosphoenolpyruvate carboxykinase DNQ11_25420 PF01784 NIF3 (NGG1p interacting factor 3) DNQ11_25425 PF13426 PAS domain DNQ11_25425 PF13188 PAS domain DNQ11_25425 PF00989 PAS fold DNQ11_25425 PF00512 His Kinase A (phospho-acceptor) domain DNQ11_25425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_25430 PF00512 His Kinase A (phospho-acceptor) domain DNQ11_25430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_25430 PF08447 PAS fold DNQ11_25430 PF00989 PAS fold DNQ11_25435 PF00561 alpha/beta hydrolase fold DNQ11_25435 PF08386 TAP-like protein DNQ11_25440 PF00884 Sulfatase DNQ11_25465 PF00005 ABC transporter DNQ11_25470 PF00528 Binding-protein-dependent transport system inner membrane component DNQ11_25495 PF00293 NUDIX domain DNQ11_25520 PF02664 S-Ribosylhomocysteinase (LuxS) DNQ11_25525 PF01809 Putative membrane protein insertion efficiency factor DNQ11_25530 PF00484 Carbonic anhydrase DNQ11_25535 PF01654 Cytochrome bd terminal oxidase subunit I DNQ11_25540 PF02322 Cytochrome bd terminal oxidase subunit II DNQ11_25545 PF10676 Spore germination protein gerPA/gerPF DNQ11_25565 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DNQ11_25565 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DNQ11_25590 PF04012 PspA/IM30 family DNQ11_25610 PF17910 FeoB cytosolic helical domain DNQ11_25610 PF02421 Ferrous iron transport protein B DNQ11_25610 PF07670 Nucleoside recognition DNQ11_25610 PF07664 Ferrous iron transport protein B C terminus DNQ11_25620 PF09515 Thiamine transporter protein (Thia_YuaJ) DNQ11_25625 PF00512 His Kinase A (phospho-acceptor) domain DNQ11_25625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_25625 PF00672 HAMP domain DNQ11_25630 PF00486 Transcriptional regulatory protein, C terminal DNQ11_25630 PF00072 Response regulator receiver domain DNQ11_25655 PF00156 Phosphoribosyl transferase domain DNQ11_25660 PF00781 Diacylglycerol kinase catalytic domain DNQ11_25680 PF00248 Aldo/keto reductase family DNQ11_25700 PF09335 SNARE associated Golgi protein DNQ11_25705 PF00398 Ribosomal RNA adenine dimethylase DNQ11_25710 PF02687 FtsX-like permease family DNQ11_25715 PF00005 ABC transporter DNQ11_25720 PF06445 GyrI-like small molecule binding domain DNQ11_25720 PF12833 Helix-turn-helix domain DNQ11_25725 PF00486 Transcriptional regulatory protein, C terminal DNQ11_25725 PF00072 Response regulator receiver domain DNQ11_25730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_25740 PF02687 FtsX-like permease family DNQ11_25745 PF00005 ABC transporter DNQ11_25760 PF02447 GntP family permease DNQ11_25775 PF07071 KDGP aldolase DNQ11_25780 PF03841 L-seryl-tRNA selenium transferase DNQ11_25785 PF01979 Amidohydrolase family DNQ11_25800 PF02557 D-alanyl-D-alanine carboxypeptidase DNQ11_25805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_25805 PF00512 His Kinase A (phospho-acceptor) domain DNQ11_25810 PF00486 Transcriptional regulatory protein, C terminal DNQ11_25810 PF00072 Response regulator receiver domain DNQ11_25815 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DNQ11_25815 PF13378 Enolase C-terminal domain-like DNQ11_25820 PF00501 AMP-binding enzyme DNQ11_25820 PF13193 AMP-binding enzyme C-terminal domain DNQ11_25825 PF00378 Enoyl-CoA hydratase/isomerase DNQ11_25830 PF00561 alpha/beta hydrolase fold DNQ11_25835 PF16582 Middle domain of thiamine pyrophosphate DNQ11_25835 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DNQ11_25835 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DNQ11_25840 PF00425 chorismate binding enzyme DNQ11_25845 PF01040 UbiA prenyltransferase family DNQ11_25850 PF01258 Prokaryotic dksA/traR C4-type zinc finger DNQ11_25855 PF00313 'Cold-shock' DNA-binding domain DNQ11_25875 PF00343 Carbohydrate phosphorylase DNQ11_25880 PF08323 Starch synthase catalytic domain DNQ11_25880 PF00534 Glycosyl transferases group 1 DNQ11_25885 PF00483 Nucleotidyl transferase DNQ11_25890 PF00483 Nucleotidyl transferase DNQ11_25895 PF00128 Alpha amylase, catalytic domain DNQ11_25895 PF02806 Alpha amylase, C-terminal all-beta domain DNQ11_25895 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DNQ11_25915 PF00056 lactate/malate dehydrogenase, NAD binding domain DNQ11_25915 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DNQ11_26015 PF05698 Bacterial trigger factor protein (TF) C-terminus DNQ11_26015 PF05697 Bacterial trigger factor protein (TF) DNQ11_26055 PF02308 MgtC family DNQ11_26060 PF07885 Ion channel DNQ11_26060 PF02254 TrkA-N domain DNQ11_26065 PF08868 YugN-like family DNQ11_26070 PF00342 Phosphoglucose isomerase DNQ11_26080 PF04070 Domain of unknown function (DUF378) DNQ11_26085 PF00575 S1 RNA binding domain DNQ11_26090 PF00155 Aminotransferase class I and II DNQ11_26095 PF01037 Lrp/AsnC ligand binding domain DNQ11_26100 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DNQ11_26100 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DNQ11_26105 PF00561 alpha/beta hydrolase fold DNQ11_26105 PF08386 TAP-like protein DNQ11_26115 PF00155 Aminotransferase class I and II DNQ11_26125 PF08810 Kinase associated protein B DNQ11_26130 PF00929 Exonuclease DNQ11_26135 PF03600 Citrate transporter DNQ11_26155 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DNQ11_26155 PF03129 Anticodon binding domain DNQ11_26160 PF03061 Thioesterase superfamily DNQ11_26170 PF02632 BioY family DNQ11_26180 PF00483 Nucleotidyl transferase DNQ11_26185 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DNQ11_26185 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DNQ11_26185 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DNQ11_26185 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DNQ11_26190 PF02457 DisA bacterial checkpoint controller nucleotide-binding DNQ11_26190 PF10372 Bacterial membrane-spanning protein N-terminus DNQ11_26195 PF00883 Cytosol aminopeptidase family, catalytic domain DNQ11_26195 PF02789 Cytosol aminopeptidase family, N-terminal domain DNQ11_26200 PF06725 3D domain DNQ11_26210 PF00293 NUDIX domain DNQ11_26210 PF13344 Haloacid dehalogenase-like hydrolase DNQ11_26215 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNQ11_26220 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNQ11_26230 PF06445 GyrI-like small molecule binding domain DNQ11_26245 PF04463 Protein of unknown function (DUF523) DNQ11_26265 PF01521 Iron-sulphur cluster biosynthesis DNQ11_26270 PF01678 Diaminopimelate epimerase DNQ11_26275 PF07293 Protein of unknown function (DUF1450) DNQ11_26280 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNQ11_26290 PF09383 NIL domain DNQ11_26290 PF00005 ABC transporter DNQ11_26295 PF03649 Uncharacterised protein family (UPF0014) DNQ11_26300 PF03831 PhnA domain DNQ11_26300 PF08274 PhnA Zinc-Ribbon DNQ11_26340 PF07315 Protein of unknown function (DUF1462) DNQ11_26345 PF01106 NifU-like domain DNQ11_26365 PF04608 Phosphatidylglycerophosphatase A DNQ11_26375 PF02525 Flavodoxin-like fold DNQ11_26380 PF13344 Haloacid dehalogenase-like hydrolase DNQ11_26390 PF01934 Protein of unknown function DUF86 DNQ11_26395 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DNQ11_26415 PF06265 Protein of unknown function (DUF1027) DNQ11_26420 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) DNQ11_26425 PF13411 MerR HTH family regulatory protein DNQ11_26425 PF07739 TipAS antibiotic-recognition domain DNQ11_26430 PF10086 YhfC intramembrane metalloprotease DNQ11_26450 PF04055 Radical SAM superfamily DNQ11_26450 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DNQ11_26455 PF01551 Peptidase family M23 DNQ11_26465 PF08827 Domain of unknown function (DUF1805) DNQ11_26470 PF02872 5'-nucleotidase, C-terminal domain DNQ11_26485 PF03551 Transcriptional regulator PadR-like family DNQ11_26490 PF04892 VanZ like family DNQ11_26500 PF01458 Uncharacterized protein family (UPF0051) DNQ11_26505 PF01592 NifU-like N terminal domain DNQ11_26510 PF00266 Aminotransferase class-V DNQ11_26515 PF01458 Uncharacterized protein family (UPF0051) DNQ11_26520 PF00005 ABC transporter DNQ11_26525 PF03180 NLPA lipoprotein DNQ11_26530 PF03180 NLPA lipoprotein DNQ11_26535 PF00528 Binding-protein-dependent transport system inner membrane component DNQ11_26540 PF09383 NIL domain DNQ11_26540 PF00005 ABC transporter DNQ11_26550 PF00085 Thioredoxin DNQ11_26555 PF01751 Toprim domain DNQ11_26570 PF01597 Glycine cleavage H-protein DNQ11_26575 PF03960 ArsC family DNQ11_26630 PF00056 lactate/malate dehydrogenase, NAD binding domain DNQ11_26630 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DNQ11_26655 PF00440 Bacterial regulatory proteins, tetR family DNQ11_26655 PF13305 Tetracyclin repressor-like, C-terminal domain DNQ11_26660 PF00753 Metallo-beta-lactamase superfamily DNQ11_26665 PF02770 Acyl-CoA dehydrogenase, middle domain DNQ11_26665 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DNQ11_26665 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DNQ11_26675 PF02803 Thiolase, C-terminal domain DNQ11_26675 PF00108 Thiolase, N-terminal domain DNQ11_26680 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DNQ11_26680 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DNQ11_26680 PF00378 Enoyl-CoA hydratase/isomerase DNQ11_26690 PF14115 YuzL-like protein DNQ11_26695 PF00768 D-alanyl-D-alanine carboxypeptidase DNQ11_26695 PF07943 Penicillin-binding protein 5, C-terminal domain DNQ11_26700 PF01619 Proline dehydrogenase DNQ11_26705 PF10835 Protein of unknown function (DUF2573) DNQ11_26710 PF01910 Thiamine-binding protein DNQ11_26715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DNQ11_26715 PF02743 Cache domain DNQ11_26715 PF00672 HAMP domain DNQ11_26735 PF07690 Major Facilitator Superfamily DNQ11_26740 PF13520 Amino acid permease DNQ11_26750 PF02096 60Kd inner membrane protein DNQ11_26760 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DNQ11_26760 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DNQ11_26800 PF09335 SNARE associated Golgi protein DNQ11_26810 PF03734 L,D-transpeptidase catalytic domain DNQ11_26810 PF17969 L,D-transpeptidase C-terminal domain DNQ11_26815 PF00072 Response regulator receiver domain DNQ11_26815 PF00486 Transcriptional regulatory protein, C terminal DNQ11_26820 PF16736 Single Cache-like DNQ11_26820 PF00512 His Kinase A (phospho-acceptor) domain DNQ11_26820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_26820 PF00989 PAS fold DNQ11_26830 PF09334 tRNA synthetases class I (M) DNQ11_26830 PF08264 Anticodon-binding domain of tRNA DNQ11_26840 PF02743 Cache domain DNQ11_26840 PF00672 HAMP domain DNQ11_26840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DNQ11_26845 PF01883 Iron-sulfur cluster assembly protein DNQ11_26850 PF01447 Thermolysin metallopeptidase, catalytic domain DNQ11_26850 PF07504 Fungalysin/Thermolysin Propeptide Motif DNQ11_26850 PF03413 Peptidase propeptide and YPEB domain DNQ11_26850 PF02868 Thermolysin metallopeptidase, alpha-helical domain DNQ11_26855 PF17954 Quercetinase C-terminal cupin domain DNQ11_26855 PF02678 Pirin DNQ11_26860 PF01047 MarR family DNQ11_26870 PF00999 Sodium/hydrogen exchanger family DNQ11_26875 PF02080 TrkA-C domain DNQ11_26885 PF01235 Sodium:alanine symporter family DNQ11_26890 PF00210 Ferritin-like domain DNQ11_26905 PF03641 Possible lysine decarboxylase DNQ11_26915 PF00210 Ferritin-like domain DNQ11_26925 PF07662 Na+ dependent nucleoside transporter C-terminus DNQ11_26925 PF01773 Na+ dependent nucleoside transporter N-terminus DNQ11_26930 PF01773 Na+ dependent nucleoside transporter N-terminus DNQ11_26930 PF07662 Na+ dependent nucleoside transporter C-terminus DNQ11_26935 PF01235 Sodium:alanine symporter family DNQ11_26940 PF01235 Sodium:alanine symporter family DNQ11_26945 PF13460 NAD(P)H-binding DNQ11_26975 PF00248 Aldo/keto reductase family DNQ11_26980 PF07690 Major Facilitator Superfamily DNQ11_26985 PF01638 HxlR-like helix-turn-helix DNQ11_26990 PF07849 Protein of unknown function (DUF1641) DNQ11_26995 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNQ11_27000 PF01479 S4 domain DNQ11_27000 PF00579 tRNA synthetases class I (W and Y) DNQ11_27005 PF01565 FAD binding domain DNQ11_27005 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DNQ11_27015 PF00672 HAMP domain DNQ11_27015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DNQ11_27015 PF17202 Single cache domain 3 DNQ11_27025 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DNQ11_27030 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DNQ11_27045 PF13302 Acetyltransferase (GNAT) domain DNQ11_27050 PF06146 Phosphate-starvation-inducible E DNQ11_27070 PF00005 ABC transporter DNQ11_27075 PF01032 FecCD transport family DNQ11_27080 PF01032 FecCD transport family DNQ11_27090 PF00486 Transcriptional regulatory protein, C terminal DNQ11_27090 PF00072 Response regulator receiver domain DNQ11_27100 PF01668 SmpB protein DNQ11_27110 PF08206 Ribonuclease B OB domain DNQ11_27110 PF17876 Cold shock domain DNQ11_27110 PF00575 S1 RNA binding domain DNQ11_27110 PF00773 RNB domain DNQ11_27115 PF12146 Serine aminopeptidase, S33 DNQ11_27120 PF03840 Preprotein translocase SecG subunit DNQ11_27125 PF04172 LrgB-like family DNQ11_27130 PF03788 LrgA family DNQ11_27135 PF01156 Inosine-uridine preferring nucleoside hydrolase DNQ11_27235 PF04860 Phage portal protein DNQ11_27260 PF00589 Phage integrase family DNQ11_27260 PF02899 Phage integrase, N-terminal SAM-like domain DNQ11_27265 PF00113 Enolase, C-terminal TIM barrel domain DNQ11_27265 PF03952 Enolase, N-terminal domain DNQ11_27270 PF01676 Metalloenzyme superfamily DNQ11_27270 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DNQ11_27275 PF00121 Triosephosphate isomerase DNQ11_27280 PF00162 Phosphoglycerate kinase DNQ11_27285 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DNQ11_27285 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DNQ11_27290 PF04198 Putative sugar-binding domain DNQ11_27300 PF00309 Sigma-54 factor, Activator interacting domain (AID) DNQ11_27300 PF04963 Sigma-54 factor, core binding domain DNQ11_27300 PF04552 Sigma-54, DNA binding domain DNQ11_27320 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DNQ11_27325 PF07451 Stage V sporulation protein AD (SpoVAD) DNQ11_27330 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DNQ11_27340 PF04239 Protein of unknown function (DUF421) DNQ11_27345 PF00574 Clp protease DNQ11_27355 PF00381 PTS HPr component phosphorylation site DNQ11_27360 PF02650 WhiA C-terminal HTH domain DNQ11_27360 PF14527 WhiA LAGLIDADG-like domain DNQ11_27360 PF10298 WhiA N-terminal LAGLIDADG-like domain DNQ11_27365 PF01933 Uncharacterised protein family UPF0052 DNQ11_27370 PF03668 P-loop ATPase protein family DNQ11_27375 PF00293 NUDIX domain DNQ11_27385 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNQ11_27395 PF14602 Hexapeptide repeat of succinyl-transferase DNQ11_27400 PF13419 Haloacid dehalogenase-like hydrolase DNQ11_27405 PF01790 Prolipoprotein diacylglyceryl transferase DNQ11_27410 PF07475 HPr Serine kinase C-terminal domain DNQ11_27410 PF02603 HPr Serine kinase N terminus DNQ11_27415 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV DNQ11_27425 PF17760 UvrA interaction domain DNQ11_27425 PF17755 UvrA DNA-binding domain DNQ11_27425 PF00005 ABC transporter DNQ11_27430 PF17757 UvrB interaction domain DNQ11_27430 PF02151 UvrB/uvrC motif DNQ11_27430 PF04851 Type III restriction enzyme, res subunit DNQ11_27430 PF12344 Ultra-violet resistance protein B DNQ11_27430 PF00271 Helicase conserved C-terminal domain DNQ11_27435 PF12323 Helix-turn-helix domain DNQ11_27435 PF07282 Putative transposase DNA-binding domain DNQ11_27435 PF01385 Probable transposase DNQ11_27450 PF13411 MerR HTH family regulatory protein DNQ11_27450 PF07739 TipAS antibiotic-recognition domain DNQ11_27480 PF03601 Conserved hypothetical protein 698 DNQ11_27485 PF03466 LysR substrate binding domain DNQ11_27485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNQ11_27490 PF00376 MerR family regulatory protein DNQ11_27490 PF09278 MerR, DNA binding DNQ11_27495 PF03358 NADPH-dependent FMN reductase DNQ11_27510 PF00664 ABC transporter transmembrane region DNQ11_27510 PF00005 ABC transporter DNQ11_27515 PF17820 PDZ domain DNQ11_27520 PF03572 Peptidase family S41 DNQ11_27520 PF01471 Putative peptidoglycan binding domain DNQ11_27520 PF17820 PDZ domain DNQ11_27525 PF18075 FtsX extracellular domain DNQ11_27525 PF02687 FtsX-like permease family DNQ11_27530 PF00005 ABC transporter DNQ11_27535 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DNQ11_27550 PF02810 SEC-C motif DNQ11_27550 PF07516 SecA Wing and Scaffold domain DNQ11_27550 PF07517 SecA DEAD-like domain DNQ11_27550 PF01043 SecA preprotein cross-linking domain DNQ11_27555 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus DNQ11_27555 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DNQ11_27560 PF00313 'Cold-shock' DNA-binding domain DNQ11_27570 PF04851 Type III restriction enzyme, res subunit DNQ11_27570 PF00271 Helicase conserved C-terminal domain DNQ11_27575 PF00877 NlpC/P60 family DNQ11_27575 PF01476 LysM domain DNQ11_27580 PF01638 HxlR-like helix-turn-helix DNQ11_27590 PF02645 Uncharacterised protein, DegV family COG1307 DNQ11_27595 PF01205 Uncharacterized protein family UPF0029 DNQ11_27595 PF09186 Domain of unknown function (DUF1949) DNQ11_27600 PF03816 Cell envelope-related transcriptional attenuator domain DNQ11_27605 PF02350 UDP-N-acetylglucosamine 2-epimerase DNQ11_27610 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DNQ11_27610 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DNQ11_27610 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DNQ11_27615 PF00953 Glycosyl transferase family 4 DNQ11_27625 PF00158 Sigma-54 interaction domain DNQ11_27625 PF03610 PTS system fructose IIA component DNQ11_27625 PF00874 PRD domain DNQ11_27635 PF02417 Chromate transporter DNQ11_27640 PF04794 YdjC-like protein DNQ11_27645 PF02056 Family 4 glycosyl hydrolase DNQ11_27645 PF11975 Family 4 glycosyl hydrolase C-terminal domain DNQ11_27650 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DNQ11_27655 PF02378 Phosphotransferase system, EIIC DNQ11_27660 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DNQ11_27670 PF02675 S-adenosylmethionine decarboxylase DNQ11_27675 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DNQ11_27680 PF02378 Phosphotransferase system, EIIC DNQ11_27685 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DNQ11_27690 PF00375 Sodium:dicarboxylate symporter family DNQ11_27700 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DNQ11_27710 PF03466 LysR substrate binding domain DNQ11_27710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNQ11_27735 PF01654 Cytochrome bd terminal oxidase subunit I DNQ11_27740 PF02322 Cytochrome bd terminal oxidase subunit II DNQ11_27745 PF02040 Arsenical pump membrane protein DNQ11_27750 PF13667 ThiC-associated domain DNQ11_27750 PF01964 Radical SAM ThiC family DNQ11_27755 PF02652 L-lactate permease DNQ11_27765 PF09988 Uncharacterized metal-binding protein (DUF2227) DNQ11_27780 PF00884 Sulfatase DNQ11_27790 PF01063 Amino-transferase class IV DNQ11_27800 PF07662 Na+ dependent nucleoside transporter C-terminus DNQ11_27800 PF01773 Na+ dependent nucleoside transporter N-terminus DNQ11_27820 PF02028 BCCT, betaine/carnitine/choline family transporter DNQ11_27830 PF06725 3D domain DNQ11_27830 PF01476 LysM domain DNQ11_27855 PF04434 SWIM zinc finger DNQ11_27860 PF12419 SNF2 Helicase protein DNQ11_27860 PF00176 SNF2 family N-terminal domain DNQ11_27860 PF00271 Helicase conserved C-terminal domain DNQ11_27890 PF04542 Sigma-70 region 2 DNQ11_27890 PF04545 Sigma-70, region 4 DNQ11_27895 PF04893 Yip1 domain DNQ11_27900 PF02687 FtsX-like permease family DNQ11_27900 PF12704 MacB-like periplasmic core domain DNQ11_27905 PF00005 ABC transporter DNQ11_27925 PF07690 Major Facilitator Superfamily DNQ11_27940 PF16736 Single Cache-like DNQ11_27940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_27940 PF00512 His Kinase A (phospho-acceptor) domain DNQ11_27940 PF00989 PAS fold DNQ11_27945 PF00072 Response regulator receiver domain DNQ11_27945 PF00486 Transcriptional regulatory protein, C terminal DNQ11_27950 PF16363 GDP-mannose 4,6 dehydratase DNQ11_27955 PF03816 Cell envelope-related transcriptional attenuator domain DNQ11_27965 PF07977 FabA-like domain DNQ11_27970 PF02350 UDP-N-acetylglucosamine 2-epimerase DNQ11_27975 PF00005 ABC transporter DNQ11_27975 PF08239 Bacterial SH3 domain DNQ11_27980 PF01061 ABC-2 type transporter DNQ11_27985 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DNQ11_27985 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DNQ11_27985 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DNQ11_28030 PF12116 Stage III sporulation protein D DNQ11_28045 PF01551 Peptidase family M23 DNQ11_28055 PF00005 ABC transporter DNQ11_28065 PF08486 Stage II sporulation protein DNQ11_28070 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DNQ11_28080 PF06612 Protein of unknown function (DUF1146) DNQ11_28090 PF00361 Proton-conducting membrane transporter DNQ11_28095 PF00361 Proton-conducting membrane transporter DNQ11_28100 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus DNQ11_28100 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DNQ11_28100 PF00361 Proton-conducting membrane transporter DNQ11_28105 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DNQ11_28110 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DNQ11_28120 PF00146 NADH dehydrogenase DNQ11_28125 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DNQ11_28130 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DNQ11_28135 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DNQ11_28140 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DNQ11_28145 PF03707 Bacterial signalling protein N terminal repeat DNQ11_28145 PF00990 Diguanylate cyclase, GGDEF domain DNQ11_28145 PF00563 EAL domain DNQ11_28160 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DNQ11_28160 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DNQ11_28165 PF02874 ATP synthase alpha/beta family, beta-barrel domain DNQ11_28165 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DNQ11_28170 PF00231 ATP synthase DNQ11_28175 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DNQ11_28175 PF00306 ATP synthase alpha/beta chain, C terminal domain DNQ11_28175 PF02874 ATP synthase alpha/beta family, beta-barrel domain DNQ11_28180 PF00213 ATP synthase delta (OSCP) subunit DNQ11_28185 PF00430 ATP synthase B/B' CF(0) DNQ11_28190 PF00137 ATP synthase subunit C DNQ11_28195 PF00119 ATP synthase A chain DNQ11_28200 PF03899 ATP synthase I chain DNQ11_28220 PF00464 Serine hydroxymethyltransferase DNQ11_28225 PF04260 Protein of unknown function (DUF436) DNQ11_28230 PF02502 Ribose/Galactose Isomerase DNQ11_28235 PF01451 Low molecular weight phosphotyrosine protein phosphatase DNQ11_28245 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DNQ11_28250 PF07681 DoxX DNQ11_28255 PF01613 Flavin reductase like domain DNQ11_28270 PF02659 Putative manganese efflux pump DNQ11_28275 PF03481 Putative GTP-binding controlling metal-binding DNQ11_28275 PF01300 Telomere recombination DNQ11_28285 PF09551 Stage II sporulation protein R (spore_II_R) DNQ11_28290 PF17827 PrmC N-terminal domain DNQ11_28290 PF13847 Methyltransferase domain DNQ11_28295 PF00472 RF-1 domain DNQ11_28295 PF03462 PCRF domain DNQ11_28300 PF00265 Thymidine kinase DNQ11_28305 PF01197 Ribosomal protein L31 DNQ11_28310 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DNQ11_28310 PF07498 Rho termination factor, N-terminal domain DNQ11_28310 PF07497 Rho termination factor, RNA-binding domain DNQ11_28315 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DNQ11_28325 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DNQ11_28330 PF01116 Fructose-bisphosphate aldolase class-II DNQ11_28335 PF00072 Response regulator receiver domain DNQ11_28340 PF10740 Domain of unknown function (DUF2529) DNQ11_28345 PF00117 Glutamine amidotransferase class-I DNQ11_28345 PF06418 CTP synthase N-terminus DNQ11_28350 PF05066 HB1, ASXL, restriction endonuclease HTH domain DNQ11_28360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DNQ11_28360 PF02770 Acyl-CoA dehydrogenase, middle domain DNQ11_28360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DNQ11_28365 PF02770 Acyl-CoA dehydrogenase, middle domain DNQ11_28365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DNQ11_28365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DNQ11_28370 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DNQ11_28370 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DNQ11_28375 PF00108 Thiolase, N-terminal domain DNQ11_28375 PF02803 Thiolase, C-terminal domain DNQ11_28380 PF02754 Cysteine-rich domain DNQ11_28380 PF13183 4Fe-4S dicluster domain DNQ11_28385 PF13091 PLD-like domain DNQ11_28390 PF03851 UV-endonuclease UvdE DNQ11_28395 PF00990 Diguanylate cyclase, GGDEF domain DNQ11_28395 PF00563 EAL domain DNQ11_28395 PF03707 Bacterial signalling protein N terminal repeat DNQ11_28415 PF00072 Response regulator receiver domain DNQ11_28415 PF00196 Bacterial regulatory proteins, luxR family DNQ11_28420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_28420 PF07730 Histidine kinase DNQ11_28430 PF00005 ABC transporter DNQ11_28435 PF00557 Metallopeptidase family M24 DNQ11_28445 PF01473 Putative cell wall binding repeat DNQ11_28445 PF02324 Glycosyl hydrolase family 70 DNQ11_28455 PF02225 PA domain DNQ11_28455 PF04389 Peptidase family M28 DNQ11_28475 PF08281 Sigma-70, region 4 DNQ11_28475 PF04542 Sigma-70 region 2 DNQ11_28480 PF00750 tRNA synthetases class I (R) DNQ11_28480 PF03485 Arginyl tRNA synthetase N terminal domain DNQ11_28480 PF05746 DALR anticodon binding domain DNQ11_28485 PF09148 Domain of unknown function (DUF1934) DNQ11_28490 PF17676 LD-carboxypeptidase C-terminal domain DNQ11_28490 PF02016 LD-carboxypeptidase N-terminal domain DNQ11_28510 PF00491 Arginase family DNQ11_28515 PF17284 Spermidine synthase tetramerisation domain DNQ11_28520 PF07690 Major Facilitator Superfamily DNQ11_28525 PF13411 MerR HTH family regulatory protein DNQ11_28530 PF03009 Glycerophosphoryl diester phosphodiesterase family DNQ11_28535 PF00905 Penicillin binding protein transpeptidase domain DNQ11_28535 PF00912 Transglycosylase DNQ11_28545 PF08741 YwhD family DNQ11_28550 PF02163 Peptidase family M50 DNQ11_28555 PF01361 Tautomerase enzyme DNQ11_28560 PF01966 HD domain DNQ11_28565 PF01497 Periplasmic binding protein DNQ11_28575 PF01032 FecCD transport family DNQ11_28585 PF07293 Protein of unknown function (DUF1450) DNQ11_28600 PF03099 Biotin/lipoate A/B protein ligase family DNQ11_28605 PF01515 Phosphate acetyl/butaryl transferase DNQ11_28615 PF07943 Penicillin-binding protein 5, C-terminal domain DNQ11_28615 PF00768 D-alanyl-D-alanine carboxypeptidase DNQ11_28620 PF07486 Cell Wall Hydrolase DNQ11_28625 PF09671 Spore coat protein (Spore_GerQ) DNQ11_28630 PF04241 Protein of unknown function (DUF423) DNQ11_28640 PF02254 TrkA-N domain DNQ11_28640 PF07885 Ion channel DNQ11_28645 PF00860 Permease family DNQ11_28655 PF12823 Domain of unknown function (DUF3817) DNQ11_28660 PF03167 Uracil DNA glycosylase superfamily DNQ11_28665 PF12679 ABC-2 family transporter protein DNQ11_28670 PF00005 ABC transporter DNQ11_28675 PF13472 GDSL-like Lipase/Acylhydrolase family DNQ11_28680 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DNQ11_28680 PF00356 Bacterial regulatory proteins, lacI family DNQ11_28695 PF04204 Homoserine O-succinyltransferase DNQ11_28700 PF01053 Cys/Met metabolism PLP-dependent enzyme DNQ11_28715 PF00027 Cyclic nucleotide-binding domain DNQ11_28720 PF02525 Flavodoxin-like fold DNQ11_28725 PF00072 Response regulator receiver domain DNQ11_28725 PF00196 Bacterial regulatory proteins, luxR family DNQ11_28735 PF08543 Phosphomethylpyrimidine kinase DNQ11_28740 PF07694 5TMR of 5TMR-LYT DNQ11_28740 PF00990 Diguanylate cyclase, GGDEF domain DNQ11_28745 PF04328 Selenoprotein, putative DNQ11_28750 PF13722 5TM C-terminal transporter carbon starvation CstA DNQ11_28750 PF02554 Carbon starvation protein CstA DNQ11_28755 PF00072 Response regulator receiver domain DNQ11_28755 PF04397 LytTr DNA-binding domain DNQ11_28760 PF07690 Major Facilitator Superfamily DNQ11_28765 PF03808 Glycosyl transferase WecB/TagA/CpsF family DNQ11_28780 PF03458 UPF0126 domain DNQ11_28785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DNQ11_28795 PF03061 Thioesterase superfamily DNQ11_28805 PF00535 Glycosyl transferase family 2 DNQ11_28810 PF00005 ABC transporter DNQ11_28810 PF12848 ABC transporter DNQ11_28840 PF00535 Glycosyl transferase family 2 DNQ11_28845 PF00440 Bacterial regulatory proteins, tetR family DNQ11_28850 PF00873 AcrB/AcrD/AcrF family DNQ11_28855 PF01625 Peptide methionine sulfoxide reductase DNQ11_28855 PF01641 SelR domain DNQ11_28860 PF01594 AI-2E family transporter DNQ11_28865 PF04172 LrgB-like family DNQ11_28870 PF03788 LrgA family DNQ11_28875 PF04397 LytTr DNA-binding domain DNQ11_28875 PF00072 Response regulator receiver domain DNQ11_28880 PF13492 GAF domain DNQ11_28880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_28880 PF07694 5TMR of 5TMR-LYT DNQ11_28880 PF06580 Histidine kinase DNQ11_28885 PF07690 Major Facilitator Superfamily DNQ11_28890 PF02028 BCCT, betaine/carnitine/choline family transporter DNQ11_28895 PF02898 Nitric oxide synthase, oxygenase domain DNQ11_28905 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DNQ11_28905 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DNQ11_28915 PF02293 AmiS/UreI family transporter DNQ11_28925 PF16363 GDP-mannose 4,6 dehydratase DNQ11_28930 PF03006 Haemolysin-III related DNQ11_28940 PF00270 DEAD/DEAH box helicase DNQ11_28940 PF00271 Helicase conserved C-terminal domain DNQ11_28940 PF03880 DbpA RNA binding domain DNQ11_28950 PF00478 IMP dehydrogenase / GMP reductase domain DNQ11_28955 PF01432 Peptidase family M3 DNQ11_28955 PF08439 Oligopeptidase F DNQ11_28965 PF02590 Predicted SPOUT methyltransferase DNQ11_28975 PF13180 PDZ domain DNQ11_28980 PF00753 Metallo-beta-lactamase superfamily DNQ11_28985 PF09648 YycH protein DNQ11_28990 PF07435 YycH protein DNQ11_28995 PF13426 PAS domain DNQ11_28995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNQ11_28995 PF00672 HAMP domain DNQ11_28995 PF00512 His Kinase A (phospho-acceptor) domain DNQ11_29000 PF00486 Transcriptional regulatory protein, C terminal DNQ11_29000 PF00072 Response regulator receiver domain DNQ11_29025 PF00709 Adenylosuccinate synthetase DNQ11_29030 PF00772 DnaB-like helicase N terminal domain DNQ11_29030 PF03796 DnaB-like helicase C terminal domain DNQ11_29035 PF03948 Ribosomal protein L9, C-terminal domain DNQ11_29035 PF01281 Ribosomal protein L9, N-terminal domain DNQ11_29040 PF02272 DHHA1 domain DNQ11_29040 PF01368 DHH family DNQ11_29045 PF09991 Predicted membrane protein (DUF2232) DNQ11_29050 PF01084 Ribosomal protein S18 DNQ11_29055 PF00436 Single-strand binding protein family DNQ11_29060 PF01250 Ribosomal protein S6 DNQ11_29065 PF06071 Protein of unknown function (DUF933) DNQ11_29065 PF01926 50S ribosome-binding GTPase DNQ11_29070 PF06107 Bacterial protein of unknown function (DUF951) DNQ11_29075 PF00924 Mechanosensitive ion channel DNQ11_29080 PF06866 Protein of unknown function (DUF1256) DNQ11_29085 PF17762 HTH domain found in ParB protein DNQ11_29085 PF02195 ParB-like nuclease domain DNQ11_29090 PF13614 AAA domain DNQ11_29095 PF02195 ParB-like nuclease domain DNQ11_29095 PF17762 HTH domain found in ParB protein DNQ11_29100 PF02527 rRNA small subunit methyltransferase G DNQ11_29105 PF01134 Glucose inhibited division protein A DNQ11_29105 PF13932 GidA associated domain DNQ11_29110 PF01926 50S ribosome-binding GTPase DNQ11_29110 PF12631 MnmE helical domain DNQ11_29110 PF10396 GTP-binding protein TrmE N-terminus DNQ11_29115 PF14804 Jag N-terminus DNQ11_29115 PF01424 R3H domain DNQ11_29120 PF02096 60Kd inner membrane protein DNQ11_29125 PF00825 Ribonuclease P DNQ11_29130 PF00468 Ribosomal protein L34 DNQ11_29145 PF08378 Nuclease-related domain DNQ11_29185 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DNQ11_29280 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DNQ11_29385 PF01609 Transposase DDE domain DNQ11_29390 PF01609 Transposase DDE domain DNQ11_29400 PF17854 FtsK alpha domain DNQ11_29400 PF01580 FtsK/SpoIIIE family DNQ11_29400 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DNQ11_29400 PF09397 Ftsk gamma domain DNQ11_29490 PF00437 Type II/IV secretion system protein DNQ11_29610 PF10087 Uncharacterized protein conserved in bacteria (DUF2325) DNQ11_29625 PF04235 Protein of unknown function (DUF418) DNQ11_29645 PF00395 S-layer homology domain DNQ11_29650 PF01569 PAP2 superfamily DNQ11_29675 PF00535 Glycosyl transferase family 2 DNQ11_29680 PF00483 Nucleotidyl transferase DNQ11_29685 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DNQ11_29685 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DNQ11_29685 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DNQ11_29730 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain DNQ11_29730 PF03497 Anthrax toxin LF subunit DNQ11_29735 PF00156 Phosphoribosyl transferase domain DNQ11_29740 PF00156 Phosphoribosyl transferase domain DNQ11_29750 PF02660 Glycerol-3-phosphate acyltransferase DNQ11_29755 PF00874 PRD domain DNQ11_29755 PF05043 Mga helix-turn-helix domain DNQ11_29755 PF08279 HTH domain DNQ11_29760 PF09385 Histidine kinase N terminal DNQ11_29780 PF01526 Tn3 transposase DDE domain DNQ11_29780 PF13700 Domain of unknown function (DUF4158) DNQ11_29785 PF02796 Helix-turn-helix domain of resolvase DNQ11_29785 PF00239 Resolvase, N terminal domain DNQ11_29790 PF03845 Spore germination protein DNQ11_29795 PF03323 Bacillus/Clostridium GerA spore germination protein DNQ11_29815 PF03495 Clostridial binary toxin B/anthrax toxin PA Ca-binding domain DNQ11_29815 PF17476 Clostridial binary toxin B/anthrax toxin PA domain 3 DNQ11_29815 PF07691 PA14 domain DNQ11_29815 PF17475 Clostridial binary toxin B/anthrax toxin PA domain 2 DNQ11_29820 PF01022 Bacterial regulatory protein, arsR family DNQ11_29845 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain DNQ11_29845 PF09156 Anthrax toxin lethal factor, middle domain DNQ11_29875 PF00589 Phage integrase family DNQ11_29875 PF02899 Phage integrase, N-terminal SAM-like domain DNQ11_29905 PF14436 Bacterial EndoU nuclease DNQ11_29905 PF04740 LXG domain of WXG superfamily DNQ11_29930 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment DNQ11_29945 PF00589 Phage integrase family DNQ11_29970 PF18801 response regulator aspartate phosphatase H, N terminal DNQ11_29975 PF17209 Hfq protein DNQ11_29980 PF01022 Bacterial regulatory protein, arsR family DNQ11_29985 PF02600 Disulfide bond formation protein DsbB DNQ11_30000 PF00565 Staphylococcal nuclease homologue DNQ11_30010 PF01131 DNA topoisomerase DNQ11_30010 PF01751 Toprim domain DNQ11_30010 PF13342 C-terminal repeat of topoisomerase DNQ11_30040 PF17632 Family of unknown function (DUF5513) DNQ11_30050 PF00877 NlpC/P60 family DNQ11_30085 PF12696 TraM recognition site of TraD and TraG DNQ11_30100 PF04956 TrbC/VIRB2 family DNQ11_30125 PF00437 Type II/IV secretion system protein DNQ11_30165 PF17631 Family of unknown function (DUF5512) DNQ11_30180 PF17362 Family of unknown function DNQ11_30205 PF08708 Primase C terminal 1 (PriCT-1) DNQ11_30215 PF13614 AAA domain DNQ11_30230 PF00395 S-layer homology domain DNQ11_30230 PF01520 N-acetylmuramoyl-L-alanine amidase DNQ11_30260 PF01906 Putative heavy-metal-binding DNQ11_30265 PF02517 CPBP intramembrane metalloprotease DNQ11_30270 PF04463 Protein of unknown function (DUF523) DNQ11_30275 PF00440 Bacterial regulatory proteins, tetR family DNQ11_30285 PF01569 PAP2 superfamily DNQ11_30290 PF01569 PAP2 superfamily DNQ11_30300 PF08280 M protein trans-acting positive regulator (MGA) HTH domain DNQ11_30300 PF05043 Mga helix-turn-helix domain DNQ11_30315 PF09587 Bacterial capsule synthesis protein PGA_cap DNQ11_30320 PF14102 Capsule biosynthesis CapC DNQ11_30325 PF08245 Mur ligase middle domain DNQ11_30340 PF01022 Bacterial regulatory protein, arsR family DNQ11_30360 PF10502 Signal peptidase, peptidase S26 DNQ11_30370 PF09385 Histidine kinase N terminal DNQ11_30375 PF08279 HTH domain DNQ11_30375 PF05043 Mga helix-turn-helix domain DNQ11_30375 PF00874 PRD domain DNQ11_30380 PF00874 PRD domain DNQ11_30380 PF05043 Mga helix-turn-helix domain DNQ11_30380 PF08279 HTH domain DNQ11_30385 PF01810 LysE type translocator DNQ11_30395 PF00874 PRD domain DNQ11_30395 PF08280 M protein trans-acting positive regulator (MGA) HTH domain DNQ11_30395 PF05043 Mga helix-turn-helix domain DNQ11_30425 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DNQ11_30435 PF13411 MerR HTH family regulatory protein DNQ11_30435 PF13152 Protein of unknown function (DUF3967) DNQ11_30440 PF11798 IMS family HHH motif DNQ11_30440 PF11799 impB/mucB/samB family C-terminal domain DNQ11_30440 PF00817 impB/mucB/samB family DNQ11_30460 PF17443 Uncharacterized protein pXO2-72 DNQ11_30500 PF13154 Protein of unknown function (DUF3991) DNQ11_30515 PF18840 Large polyvalent protein associated domain 25 DNQ11_30520 PF17630 Family of unknown function (DUF5511) DNQ11_30525 PF17633 Family of unknown function (DUF5514)