locus-tag	class	description
DNQ11_00010	COG0592	DNA-directed DNA polymerase activity
DNQ11_00015	COG2501	S4 domain
DNQ11_00025	COG0187	DNA topoisomerase II activity
DNQ11_00030	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
DNQ11_00065	COG0516	GMP reductase activity
DNQ11_00065	COG0517	IMP dehydrogenase activity
DNQ11_00070	COG1686	Belongs to the peptidase S11 family
DNQ11_00100	COG1428	Deoxynucleoside kinase
DNQ11_00105	COG1428	Deoxynucleoside kinase
DNQ11_00110	COG1335	isochorismatase
DNQ11_00120	COG0590	tRNA wobble adenosine to inosine editing
DNQ11_00130	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
DNQ11_00185	COG1982	Orn Lys Arg decarboxylase major
DNQ11_00195	COG0470	DNA polymerase III
DNQ11_00200	COG1774	PSP1 C-terminal conserved region
DNQ11_00210	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
DNQ11_00220	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
DNQ11_00225	COG2002	toxin-antitoxin pair type II binding
DNQ11_00230	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DNQ11_00230	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DNQ11_00235	COG0084	hydrolase, TatD family'
DNQ11_00240	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
DNQ11_00255	COG4466	Protein conserved in bacteria
DNQ11_00270	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
DNQ11_00280	COG0251	oxidation-reduction process
DNQ11_00295	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
DNQ11_00300	COG0193	aminoacyl-tRNA hydrolase activity
DNQ11_00310	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
DNQ11_00315	COG2002	toxin-antitoxin pair type II binding
DNQ11_00320	COG2244	polysaccharide biosynthetic process
DNQ11_00325	COG3956	TIGRFAM MazG family protein
DNQ11_00330	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
DNQ11_00350	COG1098	S1 RNA binding domain
DNQ11_00365	COG2208	phosphoserine phosphatase activity
DNQ11_00370	COG0037	tRNA processing
DNQ11_00380	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
DNQ11_00395	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
DNQ11_00400	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
DNQ11_00405	COG0512	Glutamine amidotransferase of anthranilate synthase
DNQ11_00410	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
DNQ11_00415	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
DNQ11_00420	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
DNQ11_00425	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
DNQ11_00430	COG1396	sequence-specific DNA binding
DNQ11_00435	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DNQ11_00465	COG3880	PFAM UvrB UvrC protein
DNQ11_00475	COG0542	response to heat
DNQ11_00480	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
DNQ11_00490	COG4956	integral membrane protein (PIN domain superfamily)
DNQ11_00510	COG1045	serine acetyltransferase
DNQ11_00525	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DNQ11_00530	COG3688	RNA-binding protein containing a PIN domain
DNQ11_00540	COG0267	Belongs to the bacterial ribosomal protein bL33 family
DNQ11_00545	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
DNQ11_00550	COG0250	Participates in transcription elongation, termination and antitermination
DNQ11_00575	COG2813	Specifically methylates the guanine in position
DNQ11_00585	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DNQ11_00590	COG1358	cellular component organization or biogenesis
DNQ11_00695	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
DNQ11_00720	COG0201	protein transport
DNQ11_00730	COG0024	Methionine aminopeptidase
DNQ11_00740	COG0257	Belongs to the bacterial ribosomal protein bL36 family
DNQ11_00770	COG1122	ATPase activity
DNQ11_00775	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
DNQ11_00780	COG0101	tRNA pseudouridine synthase activity
DNQ11_00800	COG0860	N-Acetylmuramoyl-L-alanine amidase
DNQ11_00805	COG0489	protein tyrosine kinase activity
DNQ11_00815	COG2194	sulfuric ester hydrolase activity
DNQ11_00820	COG0726	polysaccharide deacetylase
DNQ11_00905	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
DNQ11_00910	COG4856	YbbR-like protein
DNQ11_00925	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
DNQ11_00930	COG0596	Alpha beta hydrolase
DNQ11_00950	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
DNQ11_00960	COG0823	Involved in the tonB-independent uptake of proteins
DNQ11_00960	COG4946	Tricorn protease homolog
DNQ11_00960	COG1506	peptidase
DNQ11_00995	COG2011	ABC-type metal ion transport system permease component
DNQ11_01000	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
DNQ11_01005	COG1464	Belongs to the NlpA lipoprotein family
DNQ11_01020	COG0277	FAD linked oxidase domain protein
DNQ11_01025	COG2271	Major facilitator Superfamily
DNQ11_01035	COG2814	Major facilitator Superfamily
DNQ11_01050	COG0601	transmembrane transport
DNQ11_01055	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DNQ11_01060	COG0444	Belongs to the ABC transporter superfamily
DNQ11_01065	COG4608	Belongs to the ABC transporter superfamily
DNQ11_01070	COG4166	transmembrane transport
DNQ11_01080	COG2207	Transcriptional regulator
DNQ11_01095	COG4166	transmembrane transport
DNQ11_01100	COG4166	transmembrane transport
DNQ11_01105	COG0656	L-ascorbic acid biosynthetic process
DNQ11_01110	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DNQ11_01130	COG4149	molybdate abc transporter
DNQ11_01140	COG1910	domain protein
DNQ11_01155	COG0583	DNA-binding transcription factor activity
DNQ11_01160	COG0697	spore germination
DNQ11_01175	COG0204	Acyl-transferase
DNQ11_01190	COG1609	Transcriptional regulator
DNQ11_01200	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DNQ11_01215	COG0084	hydrolase, TatD family'
DNQ11_01220	COG5298	Protein conserved in bacteria
DNQ11_01245	COG0488	(ABC) transporter
DNQ11_01260	COG0747	negative chemotaxis
DNQ11_01265	COG0601	transmembrane transport
DNQ11_01275	COG0444	Belongs to the ABC transporter superfamily
DNQ11_01280	COG4608	Belongs to the ABC transporter superfamily
DNQ11_01320	COG3185	4-Hydroxyphenylpyruvate dioxygenase
DNQ11_01325	COG0179	Fumarylacetoacetate (FAA) hydrolase
DNQ11_01340	COG2814	Major facilitator Superfamily
DNQ11_01350	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
DNQ11_01360	COG4294	response to UV
DNQ11_01365	COG0705	Rhomboid family
DNQ11_01365	COG0457	Tetratricopeptide repeat
DNQ11_01375	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
DNQ11_01380	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
DNQ11_01385	COG0864	Transcriptional regulator
DNQ11_01390	COG2337	Toxic component of a toxin-antitoxin (TA) module
DNQ11_01395	COG2183	response to ionizing radiation
DNQ11_01490	COG0802	atpase or kinase
DNQ11_01495	COG1214	PFAM Peptidase M22, glycoprotease
DNQ11_01500	COG0456	acetyltransferase
DNQ11_01505	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
DNQ11_01510	COG0488	(ABC) transporter
DNQ11_01525	COG1266	CAAX protease self-immunity
DNQ11_01545	COG2252	PERMEase
DNQ11_01555	COG5002	protein histidine kinase activity
DNQ11_01590	COG2226	methyltransferase
DNQ11_01635	COG1968	undecaprenyl-diphosphatase activity
DNQ11_01650	COG2205	protein histidine kinase activity
DNQ11_01655	COG0745	RESPONSE REGULATOR receiver
DNQ11_01680	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
DNQ11_01685	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
DNQ11_01690	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
DNQ11_01700	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
DNQ11_01715	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
DNQ11_01725	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
DNQ11_01735	COG0151	Belongs to the GarS family
DNQ11_01765	COG0210	DNA helicase
DNQ11_01775	COG4851	CamS sex pheromone cAM373 precursor
DNQ11_01795	COG1335	isochorismatase
DNQ11_01805	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
DNQ11_01810	COG2011	ABC-type metal ion transport system permease component
DNQ11_01815	COG1464	Belongs to the NlpA lipoprotein family
DNQ11_01835	COG1846	Transcriptional regulator
DNQ11_01860	COG1597	lipid kinase activity
DNQ11_01865	COG0546	phosphoglycolate phosphatase activity
DNQ11_01870	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
DNQ11_01880	COG1012	belongs to the aldehyde dehydrogenase family
DNQ11_01885	COG2076	Multidrug Resistance protein
DNQ11_01890	COG2309	aminopeptidase activity
DNQ11_01905	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DNQ11_01910	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
DNQ11_01915	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DNQ11_01925	COG4807	Protein conserved in bacteria
DNQ11_01955	COG1473	amidohydrolase
DNQ11_01970	COG0450	alkyl hydroperoxide reductase
DNQ11_01975	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
DNQ11_01985	COG0235	Class ii aldolase
DNQ11_01990	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DNQ11_01995	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DNQ11_02000	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DNQ11_02025	COG0166	Belongs to the GPI family
DNQ11_02070	COG5002	protein histidine kinase activity
DNQ11_02090	COG3541	Predicted nucleotidyltransferase
DNQ11_02095	COG2814	Major facilitator Superfamily
DNQ11_02100	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DNQ11_02100	COG0723	plastoquinol--plastocyanin reductase activity
DNQ11_02110	COG0765	amino acid transport
DNQ11_02115	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DNQ11_02130	COG0840	transmembrane signaling receptor activity
DNQ11_02135	COG0840	transmembrane signaling receptor activity
DNQ11_02140	COG0366	Alpha amylase catalytic
DNQ11_02145	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DNQ11_02145	COG2190	(PTS) system
DNQ11_02145	COG1263	PTS System
DNQ11_02175	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
DNQ11_02190	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DNQ11_02200	COG1116	anion transmembrane transporter activity
DNQ11_02205	COG0488	(ABC) transporter
DNQ11_02250	COG2270	Major facilitator Superfamily
DNQ11_02265	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
DNQ11_02280	COG2310	stress, protein
DNQ11_02285	COG2310	stress, protein
DNQ11_02290	COG2310	stress, protein
DNQ11_02295	COG0861	Integral membrane protein TerC family
DNQ11_02305	COG3853	Toxic anion resistance protein (TelA)
DNQ11_02320	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
DNQ11_02330	COG1295	ribonuclease BN
DNQ11_02340	COG2217	Heavy metal translocating P-type atpase
DNQ11_02345	COG0697	spore germination
DNQ11_02365	COG0586	Pfam SNARE associated Golgi protein
DNQ11_02380	COG3871	stress protein (general stress protein 26)
DNQ11_02385	COG0387	Pfam Sodium calcium exchanger
DNQ11_02395	COG0535	radical SAM domain protein
DNQ11_02420	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
DNQ11_02425	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
DNQ11_02430	COG0582	viral genome integration into host DNA
DNQ11_02435	COG1396	sequence-specific DNA binding
DNQ11_02455	COG1396	sequence-specific DNA binding
DNQ11_02490	COG1484	DNA-dependent DNA replication
DNQ11_02595	COG0582	viral genome integration into host DNA
DNQ11_02600	COG0582	viral genome integration into host DNA
DNQ11_02745	COG0101	tRNA pseudouridine synthase activity
DNQ11_02755	COG3829	transcription factor binding
DNQ11_02765	COG0833	amino acid
DNQ11_02770	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
DNQ11_02800	COG2066	Belongs to the glutaminase family
DNQ11_02810	COG1263	PTS System
DNQ11_02810	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DNQ11_02815	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DNQ11_02830	COG0463	Glycosyl transferase, family 2
DNQ11_02845	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
DNQ11_02845	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DNQ11_02865	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
DNQ11_02885	COG1228	amidohydrolase
DNQ11_02890	COG1090	epimerase
DNQ11_02920	COG1988	membrane-bound metal-dependent
DNQ11_02925	COG1194	a g-specific adenine glycosylase
DNQ11_02950	COG1132	(ABC) transporter
DNQ11_02955	COG4129	membrane
DNQ11_02960	COG0067	glutamate synthase
DNQ11_02960	COG0069	glutamate synthase activity
DNQ11_02960	COG0070	glutamate synthase
DNQ11_02970	COG4555	ABC transporter
DNQ11_02990	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
DNQ11_02995	COG0735	belongs to the Fur family
DNQ11_03115	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
DNQ11_03120	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
DNQ11_03130	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
DNQ11_03140	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
DNQ11_03155	COG2766	serine protein kinase
DNQ11_03185	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DNQ11_03195	COG1585	Membrane protein implicated in regulation of membrane protease activity
DNQ11_03200	COG2268	Band 7 protein
DNQ11_03210	COG3290	protein histidine kinase activity
DNQ11_03215	COG4565	transcriptional regulatory protein
DNQ11_03220	COG2851	Citrate transporter
DNQ11_03245	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
DNQ11_03250	COG3842	ATPase activity
DNQ11_03255	COG1175	transmembrane transport
DNQ11_03260	COG0395	ABC-type sugar transport system, permease component
DNQ11_03270	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
DNQ11_03275	COG0745	RESPONSE REGULATOR receiver
DNQ11_03280	COG5002	protein histidine kinase activity
DNQ11_03290	COG4990	cell redox homeostasis
DNQ11_03300	COG3290	protein histidine kinase activity
DNQ11_03305	COG4565	transcriptional regulatory protein
DNQ11_03310	COG3493	citrate carrier protein
DNQ11_03315	COG0281	malic enzyme
DNQ11_03330	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DNQ11_03340	COG5002	protein histidine kinase activity
DNQ11_03345	COG0745	RESPONSE REGULATOR receiver
DNQ11_03355	COG0456	acetyltransferase
DNQ11_03355	COG0454	-acetyltransferase
DNQ11_03360	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
DNQ11_03365	COG3383	formate dehydrogenase (NAD+) activity
DNQ11_03370	COG2427	Protein of unknown function (DUF1641)
DNQ11_03385	COG0531	amino acid
DNQ11_03395	COG0640	Transcriptional regulator
DNQ11_03400	COG2217	Heavy metal translocating P-type atpase
DNQ11_03405	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
DNQ11_03420	COG3227	Zinc metalloprotease (Elastase)
DNQ11_03440	COG2720	vancomycin resistance protein
DNQ11_03445	COG1316	TRANSCRIPTIONal
DNQ11_03450	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DNQ11_03455	COG0346	lactoylglutathione lyase activity
DNQ11_03460	COG1253	flavin adenine dinucleotide binding
DNQ11_03465	COG1027	Aspartate ammonia-lyase
DNQ11_03470	COG1620	l-lactate permease
DNQ11_03485	COG3104	oligopeptide transport
DNQ11_03490	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DNQ11_03495	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DNQ11_03500	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DNQ11_03510	COG2226	methyltransferase
DNQ11_03515	COG0156	8-amino-7-oxononanoate synthase activity
DNQ11_03520	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DNQ11_03530	COG4548	von Willebrand factor, type A
DNQ11_03535	COG0714	Associated with various cellular activities
DNQ11_03540	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DNQ11_03560	COG0531	amino acid
DNQ11_03565	COG2188	Transcriptional regulator
DNQ11_03570	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DNQ11_03570	COG1263	PTS System
DNQ11_03575	COG0366	Alpha amylase catalytic
DNQ11_03590	COG0697	spore germination
DNQ11_03600	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
DNQ11_03605	COG1115	amino acid carrier protein
DNQ11_03610	COG1126	abc transporter atp-binding protein
DNQ11_03615	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DNQ11_03620	COG0765	amino acid transport
DNQ11_03625	COG0765	amino acid transport
DNQ11_03630	COG0833	amino acid
DNQ11_03655	COG2378	regulation of single-species biofilm formation
DNQ11_03660	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
DNQ11_03665	COG5002	protein histidine kinase activity
DNQ11_03680	COG0659	secondary active sulfate transmembrane transporter activity
DNQ11_03695	COG0747	negative chemotaxis
DNQ11_03705	COG0601	transmembrane transport
DNQ11_03710	COG4608	Belongs to the ABC transporter superfamily
DNQ11_03720	COG2271	Major facilitator Superfamily
DNQ11_03725	COG1846	Transcriptional regulator
DNQ11_03735	COG1609	Transcriptional regulator
DNQ11_03740	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DNQ11_03750	COG1129	ABC transporter
DNQ11_03755	COG1172	Belongs to the binding-protein-dependent transport system permease family
DNQ11_03760	COG1879	ABC-type sugar transport system periplasmic component
DNQ11_03765	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
DNQ11_03785	COG1063	alcohol dehydrogenase
DNQ11_03800	COG3568	Endonuclease Exonuclease Phosphatase
DNQ11_03825	COG1968	undecaprenyl-diphosphatase activity
DNQ11_03830	COG0840	transmembrane signaling receptor activity
DNQ11_03835	COG3584	3D domain protein
DNQ11_03835	COG1388	LysM domain
DNQ11_03840	COG1476	TRANSCRIPTIONal
DNQ11_03855	COG3104	oligopeptide transport
DNQ11_03860	COG1114	Component of the transport system for branched-chain amino acids
DNQ11_03875	COG1113	amino acid transport
DNQ11_03880	COG2252	PERMEase
DNQ11_03905	COG0475	glutathione-regulated potassium exporter activity
DNQ11_03905	COG0569	domain protein
DNQ11_03920	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
DNQ11_03925	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
DNQ11_03930	COG0833	amino acid
DNQ11_03935	COG4990	cell redox homeostasis
DNQ11_03950	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DNQ11_03955	COG0697	spore germination
DNQ11_03960	COG0531	amino acid
DNQ11_03975	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
DNQ11_03980	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
DNQ11_03985	COG1918	ferrous iron import across plasma membrane
DNQ11_03985	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
DNQ11_03990	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
DNQ11_03995	COG0573	inorganic phosphate transmembrane transporter activity
DNQ11_04000	COG0581	inorganic phosphate transmembrane transporter activity
DNQ11_04010	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DNQ11_04130	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
DNQ11_04155	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
DNQ11_04160	COG1116	anion transmembrane transporter activity
DNQ11_04165	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DNQ11_04170	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
DNQ11_04175	COG0352	thiamine-phosphate diphosphorylase activity
DNQ11_04180	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DNQ11_04185	COG2104	thiamine diphosphate biosynthetic process
DNQ11_04195	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
DNQ11_04200	COG0351	phosphomethylpyrimidine kinase
DNQ11_04245	COG2205	protein histidine kinase activity
DNQ11_04250	COG2814	Major facilitator Superfamily
DNQ11_04255	COG1846	Transcriptional regulator
DNQ11_04270	COG2252	PERMEase
DNQ11_04275	COG1028	Short-chain dehydrogenase reductase Sdr
DNQ11_04290	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DNQ11_04295	COG1621	beta-fructofuranosidase activity
DNQ11_04300	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DNQ11_04300	COG1263	PTS System
DNQ11_04305	COG1609	Transcriptional regulator
DNQ11_04315	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DNQ11_04320	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
DNQ11_04360	COG0778	Nitroreductase
DNQ11_04365	COG2719	SpoVR family
DNQ11_04395	COG0446	pyridine nucleotide-disulphide oxidoreductase
DNQ11_04400	COG1937	Protein conserved in bacteria
DNQ11_04405	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DNQ11_04405	COG0425	Belongs to the sulfur carrier protein TusA family
DNQ11_04410	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DNQ11_04410	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DNQ11_04415	COG0425	Belongs to the sulfur carrier protein TusA family
DNQ11_04420	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DNQ11_04430	COG2210	Belongs to the sulfur carrier protein TusA family
DNQ11_04435	COG0730	response to heat
DNQ11_04445	COG1316	TRANSCRIPTIONal
DNQ11_04450	COG0604	alcohol dehydrogenase
DNQ11_04455	COG1283	sodium-dependent phosphate transmembrane transporter activity
DNQ11_04470	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DNQ11_04470	COG3711	transcriptional antiterminator
DNQ11_04475	COG1447	Phosphotransferase system cellobiose-specific component IIA
DNQ11_04480	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DNQ11_04500	COG3584	3D domain protein
DNQ11_04500	COG1388	LysM domain
DNQ11_04505	COG0577	efflux transmembrane transporter activity
DNQ11_04510	COG1136	(ABC) transporter
DNQ11_04520	COG5522	Integral membrane protein (intg_mem_TP0381)
DNQ11_04535	COG1114	Component of the transport system for branched-chain amino acids
DNQ11_04540	COG3546	catalase activity
DNQ11_04575	COG0586	Pfam SNARE associated Golgi protein
DNQ11_04615	COG0531	amino acid
DNQ11_04620	COG0475	glutathione-regulated potassium exporter activity
DNQ11_04630	COG1737	Transcriptional regulator
DNQ11_04640	COG1263	PTS System
DNQ11_04640	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DNQ11_04650	COG2259	Doxx family
DNQ11_04665	COG0697	spore germination
DNQ11_04670	COG1522	sequence-specific DNA binding
DNQ11_04680	COG2076	Multidrug Resistance protein
DNQ11_04685	COG2076	Multidrug Resistance protein
DNQ11_04690	COG1309	transcriptional regulator
DNQ11_04695	COG2814	Major facilitator Superfamily
DNQ11_04700	COG1733	regulation of RNA biosynthetic process
DNQ11_04710	COG2249	NAD(P)H dehydrogenase (quinone) activity
DNQ11_04715	COG4533	DNA binding
DNQ11_04720	COG2211	Major facilitator Superfamily
DNQ11_04730	COG0693	protein deglycase activity
DNQ11_04735	COG0753	catalase activity
DNQ11_04735	COG0693	protein deglycase activity
DNQ11_04745	COG0531	amino acid
DNQ11_04750	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
DNQ11_04760	COG1012	belongs to the aldehyde dehydrogenase family
DNQ11_04780	COG1132	(ABC) transporter
DNQ11_04795	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DNQ11_04800	COG0765	amino acid transport
DNQ11_04805	COG1126	abc transporter atp-binding protein
DNQ11_04820	COG0189	ligase activity
DNQ11_04850	COG0028	Belongs to the TPP enzyme family
DNQ11_04855	COG3527	Alpha-acetolactate decarboxylase
DNQ11_04870	COG0561	phosphatase activity
DNQ11_04880	COG3409	Peptidoglycan-binding domain 1 protein
DNQ11_04880	COG5632	N-Acetylmuramoyl-L-alanine amidase
DNQ11_04890	COG0635	Involved in the biosynthesis of porphyrin-containing compound
DNQ11_04905	COG0659	secondary active sulfate transmembrane transporter activity
DNQ11_04925	COG0653	protein targeting
DNQ11_04930	COG2244	polysaccharide biosynthetic process
DNQ11_04940	COG0860	N-Acetylmuramoyl-L-alanine amidase
DNQ11_04945	COG4196	transglutaminase domain protein
DNQ11_04960	COG1696	Membrane protein involved in D-alanine export
DNQ11_04980	COG1024	Enoyl-CoA hydratase
DNQ11_05000	COG1363	Peptidase, m42
DNQ11_05020	COG3938	Belongs to the proline racemase family
DNQ11_05055	COG0601	transmembrane transport
DNQ11_05060	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DNQ11_05070	COG4608	Belongs to the ABC transporter superfamily
DNQ11_05080	COG0322	excinuclease ABC activity
DNQ11_05115	COG0477	Major facilitator Superfamily
DNQ11_05120	COG3290	protein histidine kinase activity
DNQ11_05125	COG4565	transcriptional regulatory protein
DNQ11_05130	COG3181	Tripartite tricarboxylate transporter family receptor
DNQ11_05160	COG4978	Transcriptional regulator
DNQ11_05160	COG0789	Transcriptional regulator
DNQ11_05175	COG0305	Participates in initiation and elongation during chromosome replication
DNQ11_05225	COG0477	Major facilitator Superfamily
DNQ11_05300	COG1183	phosphatidylcholine synthase activity
DNQ11_05325	COG2376	Dihydroxyacetone kinase
DNQ11_05340	COG2376	Dihydroxyacetone kinase
DNQ11_05345	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
DNQ11_05350	COG1959	2 iron, 2 sulfur cluster binding
DNQ11_05385	COG3437	response regulator, receiver
DNQ11_05385	COG2770	Histidine kinase
DNQ11_05450	COG3237	CsbD-like
DNQ11_05475	COG1191	sigma factor activity
DNQ11_05485	COG2208	phosphoserine phosphatase activity
DNQ11_05490	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
DNQ11_05495	COG0784	Response regulator, receiver
DNQ11_05495	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DNQ11_05495	COG2198	Histidine kinase
DNQ11_05495	COG2205	protein histidine kinase activity
DNQ11_05520	COG0393	Putative heavy-metal-binding
DNQ11_05555	COG0420	3'-5' exonuclease activity
DNQ11_05560	COG4717	serine-type aminopeptidase activity
DNQ11_05580	COG1309	transcriptional regulator
DNQ11_05585	COG2814	Major facilitator Superfamily
DNQ11_05590	COG0346	lactoylglutathione lyase activity
DNQ11_05600	COG0346	lactoylglutathione lyase activity
DNQ11_05605	COG0457	Tetratricopeptide repeat
DNQ11_05615	COG2267	carboxylic ester hydrolase activity
DNQ11_05635	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
DNQ11_05640	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
DNQ11_05650	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
DNQ11_05695	COG0477	Major facilitator Superfamily
DNQ11_05700	COG0477	Major facilitator Superfamily
DNQ11_05710	COG3973	AAA domain
DNQ11_05715	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
DNQ11_05740	COG4980	gas vesicle protein
DNQ11_05745	COG0537	adenosine 5'-monophosphoramidase activity
DNQ11_05755	COG1131	(ABC) transporter
DNQ11_05760	COG4473	ABC transporter
DNQ11_05775	COG1309	transcriptional regulator
DNQ11_05785	COG3402	PFAM membrane-flanked domain
DNQ11_05835	COG3402	PFAM membrane-flanked domain
DNQ11_05840	COG3428	Bacterial PH domain
DNQ11_05845	COG2329	Antibiotic biosynthesis monooxygenase
DNQ11_05850	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DNQ11_05855	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
DNQ11_05900	COG1309	transcriptional regulator
DNQ11_05930	COG1609	Transcriptional regulator
DNQ11_05940	COG1234	tRNA 3'-trailer cleavage
DNQ11_05945	COG0095	Lipoate-protein ligase
DNQ11_05955	COG0318	PFAM AMP-dependent synthetase and ligase
DNQ11_05985	COG3209	COG3209 Rhs family protein
DNQ11_06030	COG1078	dGTPase activity
DNQ11_06040	COG1595	DNA-templated transcription, initiation
DNQ11_06045	COG2207	Transcriptional regulator
DNQ11_06045	COG3708	Transcriptional regulator
DNQ11_06060	COG2205	protein histidine kinase activity
DNQ11_06065	COG0745	RESPONSE REGULATOR receiver
DNQ11_06090	COG0501	Belongs to the peptidase M48B family
DNQ11_06095	COG0840	transmembrane signaling receptor activity
DNQ11_06100	COG0697	spore germination
DNQ11_06115	COG0497	DNA recombination
DNQ11_06120	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
DNQ11_06125	COG2224	Isocitrate lyase
DNQ11_06135	COG1278	Cold shock
DNQ11_06150	COG4903	ComK protein
DNQ11_06155	COG0398	Pfam SNARE associated Golgi protein
DNQ11_06165	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
DNQ11_06170	COG1074	ATP-dependent DNA helicase activity
DNQ11_06215	COG0179	Fumarylacetoacetate (FAA) hydrolase
DNQ11_06240	COG0367	asparagine synthase
DNQ11_06250	COG0753	catalase activity
DNQ11_06255	COG0004	ammonium transporteR
DNQ11_06280	COG2996	Protein conserved in bacteria
DNQ11_06290	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
DNQ11_06300	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DNQ11_06315	COG0561	phosphatase activity
DNQ11_06330	COG0542	response to heat
DNQ11_06340	COG2267	carboxylic ester hydrolase activity
DNQ11_06360	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DNQ11_06365	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DNQ11_06370	COG5504	Zn-dependent protease
DNQ11_06385	COG0180	Tryptophanyl-tRNA synthetase
DNQ11_06400	COG4166	transmembrane transport
DNQ11_06405	COG0601	transmembrane transport
DNQ11_06410	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DNQ11_06415	COG0444	Belongs to the ABC transporter superfamily
DNQ11_06420	COG4608	Belongs to the ABC transporter superfamily
DNQ11_06425	COG0534	Mate efflux family protein
DNQ11_06430	COG4166	transmembrane transport
DNQ11_06445	COG1393	Belongs to the ArsC family
DNQ11_06450	COG0861	Integral membrane protein TerC family
DNQ11_06455	COG4862	establishment of competence for transformation
DNQ11_06460	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DNQ11_06470	COG1164	Oligoendopeptidase f
DNQ11_06485	COG2346	COG2346, Truncated hemoglobins
DNQ11_06490	COG4116	CYTH
DNQ11_06500	COG2357	RelA SpoT domain protein
DNQ11_06505	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
DNQ11_06510	COG0564	pseudouridine synthase activity
DNQ11_06530	COG1216	Glycosyl transferase, family 2
DNQ11_06550	COG0463	Glycosyl transferase, family 2
DNQ11_06550	COG0457	Tetratricopeptide repeat
DNQ11_06570	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
DNQ11_06585	COG1091	dTDP-4-dehydrorhamnose reductase activity
DNQ11_06630	COG2153	protein acetylation
DNQ11_06635	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
DNQ11_06640	COG2382	esterase
DNQ11_06655	COG5492	domain, Protein
DNQ11_06660	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DNQ11_06675	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
DNQ11_06675	COG0512	Glutamine amidotransferase of anthranilate synthase
DNQ11_06710	COG1620	l-lactate permease
DNQ11_06715	COG5634	Uncharacterized conserved protein (DUF2278)
DNQ11_06775	COG0508	dehydrogenase complex catalyzes the overall conversion of
DNQ11_06785	COG1476	TRANSCRIPTIONal
DNQ11_06845	COG2226	methyltransferase
DNQ11_06860	COG1686	Belongs to the peptidase S11 family
DNQ11_06865	COG0681	Belongs to the peptidase S26 family
DNQ11_06900	COG1012	belongs to the aldehyde dehydrogenase family
DNQ11_06905	COG3842	ATPase activity
DNQ11_06910	COG1176	ABC-type spermidine putrescine transport system, permease component I
DNQ11_06915	COG1177	transmembrane transport
DNQ11_06920	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
DNQ11_06930	COG2409	Drug exporters of the RND superfamily
DNQ11_06940	COG0564	pseudouridine synthase activity
DNQ11_06950	COG2340	Cysteine-rich secretory protein family
DNQ11_06955	COG0247	lactate metabolic process
DNQ11_06960	COG0277	FAD linked oxidase domain protein
DNQ11_06965	COG3835	regulator
DNQ11_06975	COG0745	RESPONSE REGULATOR receiver
DNQ11_06980	COG5002	protein histidine kinase activity
DNQ11_06985	COG2186	Transcriptional regulator
DNQ11_07005	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
DNQ11_07015	COG2116	formate transmembrane transporter activity
DNQ11_07020	COG0861	Integral membrane protein TerC family
DNQ11_07025	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
DNQ11_07035	COG2030	dehydratase
DNQ11_07055	COG1028	Short-chain dehydrogenase reductase Sdr
DNQ11_07060	COG3243	poly(R)-hydroxyalkanoic acid synthase
DNQ11_07070	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
DNQ11_07090	COG1840	ABC-type Fe3 transport system, periplasmic component
DNQ11_07105	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DNQ11_07120	COG1349	DNA-binding transcription factor activity
DNQ11_07145	COG2861	carbohydrate metabolic process
DNQ11_07155	COG3852	Histidine kinase
DNQ11_07160	COG1846	Transcriptional regulator
DNQ11_07170	COG2318	DinB family
DNQ11_07180	COG5002	protein histidine kinase activity
DNQ11_07190	COG0720	synthase
DNQ11_07205	COG4873	Protein conserved in bacteria
DNQ11_07240	COG1780	Probably involved in ribonucleotide reductase function
DNQ11_07260	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DNQ11_07265	COG1725	Transcriptional regulator
DNQ11_07270	COG1131	(ABC) transporter
DNQ11_07280	COG1131	(ABC) transporter
DNQ11_07285	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
DNQ11_07300	COG1522	sequence-specific DNA binding
DNQ11_07310	COG1335	isochorismatase
DNQ11_07320	COG1619	proteins homologs of microcin C7 resistance protein MccF
DNQ11_07325	COG2070	2-Nitropropane dioxygenase
DNQ11_07330	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
DNQ11_07340	COG1696	Membrane protein involved in D-alanine export
DNQ11_07365	COG0716	FMN binding
DNQ11_07380	COG3173	Aminoglycoside phosphotransferase
DNQ11_07405	COG0534	Mate efflux family protein
DNQ11_07410	COG1968	undecaprenyl-diphosphatase activity
DNQ11_07425	COG1846	Transcriptional regulator
DNQ11_07435	COG1301	dicarboxylic acid transport
DNQ11_07440	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
DNQ11_07445	COG4709	membrane
DNQ11_07450	COG3874	Sporulation protein YtfJ
DNQ11_07480	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
DNQ11_07485	COG0028	Belongs to the TPP enzyme family
DNQ11_07490	COG0440	acetolactate synthase activity
DNQ11_07495	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
DNQ11_07505	COG0473	3-isopropylmalate dehydrogenase activity
DNQ11_07530	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
DNQ11_07565	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
DNQ11_07580	COG1183	phosphatidylcholine synthase activity
DNQ11_07585	COG1368	sulfuric ester hydrolase activity
DNQ11_07595	COG0019	diaminopimelate decarboxylase activity
DNQ11_07615	COG0529	Catalyzes the synthesis of activated sulfate
DNQ11_07620	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
DNQ11_07640	COG1648	precorrin-2 dehydrogenase activity
DNQ11_07650	COG0733	neurotransmitter:sodium symporter activity
DNQ11_07670	COG1757	Na H antiporter
DNQ11_07685	COG4758	membrane
DNQ11_07690	COG4585	Histidine kinase
DNQ11_07695	COG2197	response regulator
DNQ11_07705	COG1114	Component of the transport system for branched-chain amino acids
DNQ11_07715	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
DNQ11_07740	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DNQ11_07740	COG1017	nitric oxide dioxygenase activity
DNQ11_07760	COG0730	response to heat
DNQ11_07765	COG0306	phosphate transporter
DNQ11_07770	COG1392	Phosphate transport regulator
DNQ11_07775	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DNQ11_07795	COG3852	Histidine kinase
DNQ11_07800	COG1801	Protein of unknown function DUF72
DNQ11_07810	COG0582	viral genome integration into host DNA
DNQ11_07815	COG5002	protein histidine kinase activity
DNQ11_07845	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
DNQ11_07845	COG0392	lysyltransferase activity
DNQ11_07860	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
DNQ11_07865	COG1686	Belongs to the peptidase S11 family
DNQ11_07870	COG2715	membrane protein required for spore maturation
DNQ11_07875	COG0700	Nucleoside recognition
DNQ11_07880	COG1187	pseudouridine synthase activity
DNQ11_07890	COG1333	cytochrome c biogenesis protein
DNQ11_07895	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
DNQ11_07900	COG0745	RESPONSE REGULATOR receiver
DNQ11_07905	COG5002	protein histidine kinase activity
DNQ11_07910	COG2096	Adenosyltransferase
DNQ11_07925	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
DNQ11_07930	COG1141	Ferredoxin
DNQ11_07935	COG4955	Helix-turn-helix domain
DNQ11_07940	COG0514	ATP-dependent DNA helicase (RecQ)
DNQ11_07945	COG1266	CAAX protease self-immunity
DNQ11_07965	COG4862	establishment of competence for transformation
DNQ11_07970	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
DNQ11_07990	COG0492	ferredoxin-NADP+ reductase activity
DNQ11_08065	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
DNQ11_08080	COG0142	geranyltranstransferase activity
DNQ11_08090	COG0142	geranyltranstransferase activity
DNQ11_08095	COG0105	UTP biosynthetic process
DNQ11_08110	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
DNQ11_08115	COG0457	Tetratricopeptide repeat
DNQ11_08135	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
DNQ11_08150	COG4347	Protein of unknown function (DUF1405)
DNQ11_08165	COG2738	Putative neutral zinc metallopeptidase
DNQ11_08175	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DNQ11_08185	COG1694	Mazg nucleotide pyrophosphohydrolase
DNQ11_08200	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
DNQ11_08205	COG0438	transferase activity, transferring glycosyl groups
DNQ11_08245	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
DNQ11_08245	COG1199	ATP-dependent helicase activity
DNQ11_08265	COG3935	DnaD domain protein
DNQ11_08270	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
DNQ11_08280	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DNQ11_08280	COG4499	WXG100 protein secretion system (Wss), protein YukC
DNQ11_08325	COG4474	Belongs to the UPF0398 family
DNQ11_08340	COG0116	Belongs to the methyltransferase superfamily
DNQ11_08350	COG1199	ATP-dependent helicase activity
DNQ11_08355	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
DNQ11_08365	COG3173	Aminoglycoside phosphotransferase
DNQ11_08370	COG0024	Methionine aminopeptidase
DNQ11_08380	COG2233	PERMEase
DNQ11_08385	COG2311	Membrane
DNQ11_08395	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
DNQ11_08405	COG0456	acetyltransferase
DNQ11_08440	COG0754	glutathionylspermidine amidase activity
DNQ11_08455	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DNQ11_08485	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
DNQ11_08500	COG1215	transferase activity, transferring glycosyl groups
DNQ11_08505	COG0438	transferase activity, transferring glycosyl groups
DNQ11_08520	COG0454	-acetyltransferase
DNQ11_08540	COG0328	RNA-DNA hybrid ribonuclease activity
DNQ11_08580	COG1280	lysine exporter protein (LysE YggA)
DNQ11_08595	COG3162	membrane
DNQ11_08600	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DNQ11_08605	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
DNQ11_08620	COG0475	glutathione-regulated potassium exporter activity
DNQ11_08625	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
DNQ11_08630	COG4978	Transcriptional regulator
DNQ11_08630	COG0789	Transcriptional regulator
DNQ11_08640	COG2323	membrane
DNQ11_08645	COG1434	Gram-negative-bacterium-type cell wall biogenesis
DNQ11_08700	COG1923	regulation of RNA biosynthetic process
DNQ11_08710	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
DNQ11_08715	COG1360	Flagellar Motor Protein
DNQ11_08720	COG2201	protein-glutamate methylesterase activity
DNQ11_08730	COG1776	CheC inhibitor of MCP methylation
DNQ11_08730	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
DNQ11_08745	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
DNQ11_08765	COG1256	bacterial-type flagellum assembly
DNQ11_08790	COG1815	bacterial-type flagellum-dependent cell motility
DNQ11_08795	COG1558	bacterial-type flagellum-dependent cell motility
DNQ11_08800	COG1677	Flagellar hook-basal body complex protein FliE
DNQ11_08810	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
DNQ11_08820	COG1157	protein secretion by the type III secretion system
DNQ11_08860	COG0835	chemotaxis
DNQ11_08860	COG0784	Response regulator, receiver
DNQ11_08870	COG0463	Glycosyl transferase, family 2
DNQ11_08910	COG0457	Tetratricopeptide repeat
DNQ11_08910	COG0463	Glycosyl transferase, family 2
DNQ11_08925	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
DNQ11_08930	COG0741	lytic transglycosylase activity
DNQ11_08945	COG1776	CheC inhibitor of MCP methylation
DNQ11_08945	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
DNQ11_08955	COG1338	Plays a role in the flagellum-specific transport system
DNQ11_08960	COG1987	bacterial-type flagellum assembly
DNQ11_08970	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
DNQ11_08975	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
DNQ11_08980	COG1419	protein localization to endoplasmic reticulum
DNQ11_08985	COG4786	Flagellar basal body rod
DNQ11_08990	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
DNQ11_09015	COG1309	transcriptional regulator
DNQ11_09035	COG2329	Antibiotic biosynthesis monooxygenase
DNQ11_09065	COG3842	ATPase activity
DNQ11_09070	COG0725	ABC transporter, periplasmic molybdate-binding protein
DNQ11_09075	COG1177	transmembrane transport
DNQ11_09080	COG1234	tRNA 3'-trailer cleavage
DNQ11_09110	COG1686	Belongs to the peptidase S11 family
DNQ11_09120	COG0406	alpha-ribazole phosphatase activity
DNQ11_09150	COG0367	asparagine synthase
DNQ11_09180	COG1802	Transcriptional regulator
DNQ11_09185	COG0697	spore germination
DNQ11_09190	COG0523	cobalamin synthesis protein
DNQ11_09200	COG0701	Predicted permease
DNQ11_09210	COG0438	transferase activity, transferring glycosyl groups
DNQ11_09210	COG1216	Glycosyl transferase, family 2
DNQ11_09215	COG1757	Na H antiporter
DNQ11_09220	COG0114	fumarate hydratase activity
DNQ11_09250	COG3340	Belongs to the peptidase S51 family
DNQ11_09270	COG0785	Cytochrome C biogenesis protein
DNQ11_09305	COG2733	membrane
DNQ11_09345	COG1131	(ABC) transporter
DNQ11_09360	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DNQ11_09365	COG0528	UMP kinase activity
DNQ11_09375	COG1027	Aspartate ammonia-lyase
DNQ11_09380	COG0281	malic enzyme
DNQ11_09385	COG4191	Histidine kinase
DNQ11_09390	COG0784	Response regulator, receiver
DNQ11_09395	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
DNQ11_09460	COG1051	belongs to the nudix hydrolase family
DNQ11_09465	COG0860	N-Acetylmuramoyl-L-alanine amidase
DNQ11_09490	COG1966	Carbon starvation protein
DNQ11_09510	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DNQ11_09520	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
DNQ11_09530	COG2223	nitrite transmembrane transporter activity
DNQ11_09535	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
DNQ11_09550	COG2244	polysaccharide biosynthetic process
DNQ11_09555	COG0733	neurotransmitter:sodium symporter activity
DNQ11_09565	COG5566	PFAM Mor transcription activator
DNQ11_09570	COG2323	membrane
DNQ11_09590	COG2084	Dehydrogenase
DNQ11_09610	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
DNQ11_09620	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
DNQ11_09625	COG0028	Belongs to the TPP enzyme family
DNQ11_09630	COG0440	acetolactate synthase activity
DNQ11_09635	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
DNQ11_09645	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
DNQ11_09670	COG2814	Major facilitator Superfamily
DNQ11_09675	COG3384	dioxygenase
DNQ11_09685	COG3279	Response regulator of the LytR AlgR family
DNQ11_09690	COG0427	acetyl-CoA hydrolase
DNQ11_09710	COG1073	alpha beta
DNQ11_09715	COG1131	(ABC) transporter
DNQ11_09720	COG4166	transmembrane transport
DNQ11_09760	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DNQ11_09780	COG1914	H( )-stimulated, divalent metal cation uptake system
DNQ11_09795	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
DNQ11_09830	COG2390	Transcriptional regulator
DNQ11_09840	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DNQ11_09845	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
DNQ11_09860	COG4224	UPF0291 protein
DNQ11_09880	COG0006	proline dipeptidase activity
DNQ11_09885	COG2132	Multicopper oxidase
DNQ11_09915	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
DNQ11_09930	COG2372	response to copper ion
DNQ11_09930	COG1276	copper resistance
DNQ11_09935	COG4549	nuclear export factor GLE1
DNQ11_09945	COG0697	spore germination
DNQ11_09950	COG0583	DNA-binding transcription factor activity
DNQ11_09955	COG1959	2 iron, 2 sulfur cluster binding
DNQ11_09960	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
DNQ11_09965	COG0778	Nitroreductase
DNQ11_09980	COG0628	permease
DNQ11_09985	COG0039	L-malate dehydrogenase activity
DNQ11_09990	COG1231	oxidoreductase activity
DNQ11_09995	COG0523	cobalamin synthesis protein
DNQ11_10010	COG0318	PFAM AMP-dependent synthetase and ligase
DNQ11_10015	COG2030	dehydratase
DNQ11_10020	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DNQ11_10035	COG0411	ABC transporter
DNQ11_10055	COG0583	DNA-binding transcription factor activity
DNQ11_10075	COG1846	Transcriptional regulator
DNQ11_10085	COG1271	oxidase subunit
DNQ11_10090	COG1294	oxidase, subunit
DNQ11_10095	COG4988	ABC transporter
DNQ11_10100	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
DNQ11_10120	COG1686	Belongs to the peptidase S11 family
DNQ11_10135	COG1388	LysM domain
DNQ11_10135	COG0791	NLP P60 protein
DNQ11_10150	COG0745	RESPONSE REGULATOR receiver
DNQ11_10155	COG5002	protein histidine kinase activity
DNQ11_10165	COG0300	oxidoreductase activity
DNQ11_10180	COG0726	polysaccharide deacetylase
DNQ11_10205	COG0460	homoserine dehydrogenase
DNQ11_10230	COG1316	TRANSCRIPTIONal
DNQ11_10240	COG0745	RESPONSE REGULATOR receiver
DNQ11_10245	COG5002	protein histidine kinase activity
DNQ11_10250	COG0726	polysaccharide deacetylase
DNQ11_10260	COG1285	pathogenesis
DNQ11_10265	COG1247	-acetyltransferase
DNQ11_10275	COG4264	IucA IucC family
DNQ11_10280	COG0318	PFAM AMP-dependent synthetase and ligase
DNQ11_10295	COG1082	Xylose isomerase domain protein TIM barrel
DNQ11_10310	COG1279	arginine transmembrane transporter activity
DNQ11_10325	COG1752	Esterase of the alpha-beta hydrolase superfamily
DNQ11_10365	COG2002	toxin-antitoxin pair type II binding
DNQ11_10370	COG1404	Belongs to the peptidase S8 family
DNQ11_10375	COG0640	Transcriptional regulator
DNQ11_10380	COG0667	Aldo Keto reductase
DNQ11_10390	COG2814	Major facilitator Superfamily
DNQ11_10415	COG0840	transmembrane signaling receptor activity
DNQ11_10435	COG3949	Membrane
DNQ11_10440	COG0783	Belongs to the Dps family
DNQ11_10455	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DNQ11_10465	COG1231	oxidoreductase activity
DNQ11_10475	COG4989	oxidoreductase activity
DNQ11_10480	COG0523	cobalamin synthesis protein
DNQ11_10485	COG0456	acetyltransferase
DNQ11_10565	COG3443	Belongs to the bacterial solute-binding protein 9 family
DNQ11_10565	COG0803	Belongs to the bacterial solute-binding protein 9 family
DNQ11_10575	COG0702	epimerase
DNQ11_10585	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
DNQ11_10595	COG4166	transmembrane transport
DNQ11_10610	COG0406	alpha-ribazole phosphatase activity
DNQ11_10620	COG5337	Spore coat protein CotH
DNQ11_10625	COG1051	belongs to the nudix hydrolase family
DNQ11_10630	COG0586	Pfam SNARE associated Golgi protein
DNQ11_10635	COG2244	polysaccharide biosynthetic process
DNQ11_10645	COG0701	Predicted permease
DNQ11_10650	COG3689	TIGRFAM TIGR03943 family protein
DNQ11_10655	COG1607	acyl-coa hydrolase
DNQ11_10665	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DNQ11_10680	COG0702	epimerase
DNQ11_10685	COG2839	Protein conserved in bacteria
DNQ11_10690	COG1253	flavin adenine dinucleotide binding
DNQ11_10705	COG1114	Component of the transport system for branched-chain amino acids
DNQ11_10710	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DNQ11_10730	COG0860	N-Acetylmuramoyl-L-alanine amidase
DNQ11_10740	COG1876	peptidase activity
DNQ11_10750	COG0154	amidase activity
DNQ11_10755	COG2211	Major facilitator Superfamily
DNQ11_10775	COG0561	phosphatase activity
DNQ11_10785	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
DNQ11_10805	COG1819	glycosyl
DNQ11_10810	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DNQ11_10815	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DNQ11_10845	COG0456	acetyltransferase
DNQ11_10905	COG3874	Sporulation protein YtfJ
DNQ11_10930	COG2226	methyltransferase
DNQ11_10950	COG1082	Xylose isomerase domain protein TIM barrel
DNQ11_10955	COG0346	lactoylglutathione lyase activity
DNQ11_10965	COG0604	alcohol dehydrogenase
DNQ11_10970	COG1595	DNA-templated transcription, initiation
DNQ11_10995	COG0386	Belongs to the glutathione peroxidase family
DNQ11_11000	COG1305	Transglutaminase-like
DNQ11_11005	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
DNQ11_11010	COG0714	Associated with various cellular activities
DNQ11_11025	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
DNQ11_11030	COG1140	nitrate reductase beta subunit
DNQ11_11035	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
DNQ11_11040	COG2181	nitrate reductase activity
DNQ11_11060	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DNQ11_11065	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
DNQ11_11070	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
DNQ11_11075	COG0303	'Molybdopterin
DNQ11_11080	COG0314	molybdopterin synthase activity
DNQ11_11090	COG2223	nitrite transmembrane transporter activity
DNQ11_11110	COG1648	precorrin-2 dehydrogenase activity
DNQ11_11120	COG1587	Uroporphyrinogen-III synthase
DNQ11_11120	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
DNQ11_11125	COG2146	nitrite reductase [NAD(P)H] activity
DNQ11_11130	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
DNQ11_11135	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
DNQ11_11170	COG2359	stage V sporulation protein S
DNQ11_11190	COG5632	N-Acetylmuramoyl-L-alanine amidase
DNQ11_11205	COG1418	mRNA catabolic process
DNQ11_11210	COG0488	(ABC) transporter
DNQ11_11225	COG0629	single-stranded DNA binding
DNQ11_11240	COG1413	lyase activity
DNQ11_11255	COG2521	methyltransferase
DNQ11_11255	COG2136	Putative SAM-dependent methyltransferase
DNQ11_11260	COG0018	arginyl-trna synthetase
DNQ11_11285	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
DNQ11_11305	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
DNQ11_11310	COG0017	Asparaginyl-tRNA synthetase
DNQ11_11330	COG1674	ftsk spoiiie
DNQ11_11425	COG1929	Belongs to the glycerate kinase type-1 family
DNQ11_11430	COG0471	metal ion transport
DNQ11_11435	COG0745	RESPONSE REGULATOR receiver
DNQ11_11440	COG5002	protein histidine kinase activity
DNQ11_11440	COG3850	Histidine kinase
DNQ11_11455	COG0733	neurotransmitter:sodium symporter activity
DNQ11_11480	COG2610	gluconate transmembrane transporter activity
DNQ11_11485	COG1454	alcohol dehydrogenase
DNQ11_11490	COG1794	racemase activity, acting on amino acids and derivatives
DNQ11_11500	COG0456	acetyltransferase
DNQ11_11515	COG1131	(ABC) transporter
DNQ11_11530	COG0546	phosphoglycolate phosphatase activity
DNQ11_11550	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DNQ11_11565	COG0768	penicillin binding
DNQ11_11570	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
DNQ11_11575	COG0204	Acyl-transferase
DNQ11_11580	COG1272	protein, Hemolysin III
DNQ11_11590	COG0805	protein transport
DNQ11_11605	COG1307	EDD domain protein, DegV family
DNQ11_11610	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
DNQ11_11615	COG1999	signal sequence binding
DNQ11_11620	COG0071	Belongs to the small heat shock protein (HSP20) family
DNQ11_11625	COG0367	asparagine synthase
DNQ11_11645	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DNQ11_11650	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
DNQ11_11675	COG1051	belongs to the nudix hydrolase family
DNQ11_11685	COG0668	transmembrane transport
DNQ11_11690	COG2203	Gaf domain
DNQ11_11690	COG4585	Histidine kinase
DNQ11_11695	COG2197	response regulator
DNQ11_11705	COG1064	alcohol dehydrogenase
DNQ11_11730	COG1070	Carbohydrate kinase
DNQ11_11765	COG1125	glycine betaine transport
DNQ11_11765	COG0517	IMP dehydrogenase activity
DNQ11_11770	COG1174	glycine betaine transport
DNQ11_11805	COG1253	flavin adenine dinucleotide binding
DNQ11_11810	COG1012	belongs to the aldehyde dehydrogenase family
DNQ11_11815	COG5506	Protein of unknown function (DUF1694)
DNQ11_11835	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
DNQ11_11840	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
DNQ11_11845	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
DNQ11_11850	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
DNQ11_11855	COG0456	acetyltransferase
DNQ11_11860	COG3829	transcription factor binding
DNQ11_11870	COG1509	lysine 2,3-aminomutase activity
DNQ11_11910	COG4326	sporulation control protein
DNQ11_11915	COG0671	phosphoesterase, PA-phosphatase related
DNQ11_11920	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
DNQ11_11925	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DNQ11_11955	COG1715	Restriction endonuclease
DNQ11_11955	COG1787	Restriction endonuclease
DNQ11_12070	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
DNQ11_12110	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DNQ11_12110	COG4499	WXG100 protein secretion system (Wss), protein YukC
DNQ11_12115	COG2814	Major facilitator Superfamily
DNQ11_12120	COG4841	protein insertion into membrane
DNQ11_12125	COG0372	Belongs to the citrate synthase family
DNQ11_12130	COG2079	MmgE PrpD family protein
DNQ11_12135	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
DNQ11_12140	COG1960	acyl-CoA dehydrogenase activity
DNQ11_12145	COG2084	Dehydrogenase
DNQ11_12150	COG1012	belongs to the aldehyde dehydrogenase family
DNQ11_12155	COG1280	lysine exporter protein (LysE YggA)
DNQ11_12160	COG1024	Enoyl-CoA hydratase
DNQ11_12175	COG0420	3'-5' exonuclease activity
DNQ11_12180	COG0419	ATPase involved in DNA repair
DNQ11_12215	COG2223	nitrite transmembrane transporter activity
DNQ11_12225	COG1028	Short-chain dehydrogenase reductase Sdr
DNQ11_12230	COG1169	isochorismate synthase
DNQ11_12235	COG1021	2,3-dihydroxybenzoate-AMP ligase
DNQ11_12240	COG1535	isochorismatase
DNQ11_12240	COG3433	isochorismatase activity
DNQ11_12245	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
DNQ11_12250	COG3251	PFAM MbtH domain protein
DNQ11_12255	COG2814	Major facilitator Superfamily
DNQ11_12270	COG0776	regulation of translation
DNQ11_12280	COG2318	DinB family
DNQ11_12290	COG1115	amino acid carrier protein
DNQ11_12305	COG2329	Antibiotic biosynthesis monooxygenase
DNQ11_12310	COG1187	pseudouridine synthase activity
DNQ11_12315	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
DNQ11_12335	COG0596	Alpha beta hydrolase
DNQ11_12340	COG2814	Major facilitator Superfamily
DNQ11_12360	COG2226	methyltransferase
DNQ11_12405	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DNQ11_12440	COG1247	-acetyltransferase
DNQ11_12480	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DNQ11_12490	COG1278	Cold shock
DNQ11_12505	COG0010	Belongs to the arginase family
DNQ11_12510	COG0561	phosphatase activity
DNQ11_12560	COG0583	DNA-binding transcription factor activity
DNQ11_12565	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
DNQ11_12580	COG0583	DNA-binding transcription factor activity
DNQ11_12585	COG2258	MOSC domain
DNQ11_12600	COG1132	(ABC) transporter
DNQ11_12605	COG1132	(ABC) transporter
DNQ11_12625	COG1396	sequence-specific DNA binding
DNQ11_12655	COG1595	DNA-templated transcription, initiation
DNQ11_12685	COG1649	PFAM Uncharacterised BCR, COG1649
DNQ11_12715	COG2971	BadF BadG BcrA BcrD
DNQ11_12720	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
DNQ11_12725	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
DNQ11_12755	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DNQ11_12785	COG1309	transcriptional regulator
DNQ11_12800	COG1136	(ABC) transporter
DNQ11_12800	COG0577	efflux transmembrane transporter activity
DNQ11_12805	COG0500	methyltransferase
DNQ11_12805	COG3615	Tellurite resistance protein tehB
DNQ11_12815	COG2226	methyltransferase
DNQ11_12820	COG3961	Belongs to the TPP enzyme family
DNQ11_12825	COG1846	Transcriptional regulator
DNQ11_12875	COG2195	Cleaves the N-terminal amino acid of tripeptides
DNQ11_12895	COG1595	DNA-templated transcription, initiation
DNQ11_12905	COG0768	penicillin binding
DNQ11_12915	COG2367	Beta-lactamase
DNQ11_12920	COG0671	phosphoesterase, PA-phosphatase related
DNQ11_12925	COG1609	Transcriptional regulator
DNQ11_12930	COG2814	Major facilitator Superfamily
DNQ11_12935	COG0673	inositol 2-dehydrogenase activity
DNQ11_12945	COG1012	belongs to the aldehyde dehydrogenase family
DNQ11_12965	COG3718	enzyme involved in inositol metabolism
DNQ11_12990	COG0457	Tetratricopeptide repeat
DNQ11_12995	COG1476	TRANSCRIPTIONal
DNQ11_13010	COG1876	peptidase activity
DNQ11_13030	COG1309	transcriptional regulator
DNQ11_13050	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DNQ11_13065	COG1252	NADH dehydrogenase
DNQ11_13070	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DNQ11_13085	COG1131	(ABC) transporter
DNQ11_13095	COG1309	transcriptional regulator
DNQ11_13115	COG1960	acyl-CoA dehydrogenase activity
DNQ11_13120	COG0439	Biotin carboxylase
DNQ11_13125	COG0511	ligase activity, forming carbon-carbon bonds
DNQ11_13130	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
DNQ11_13135	COG1024	Enoyl-CoA hydratase
DNQ11_13140	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
DNQ11_13145	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
DNQ11_13155	COG1247	-acetyltransferase
DNQ11_13160	COG0572	uridine kinase
DNQ11_13170	COG2318	DinB family
DNQ11_13175	COG1686	Belongs to the peptidase S11 family
DNQ11_13200	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
DNQ11_13240	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
DNQ11_13240	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
DNQ11_13255	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DNQ11_13265	COG2814	Major facilitator Superfamily
DNQ11_13285	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
DNQ11_13305	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DNQ11_13320	COG1063	alcohol dehydrogenase
DNQ11_13350	COG3773	Cell wall hydrolase
DNQ11_13365	COG0745	RESPONSE REGULATOR receiver
DNQ11_13395	COG1136	(ABC) transporter
DNQ11_13420	COG0460	homoserine dehydrogenase
DNQ11_13425	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DNQ11_13435	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
DNQ11_13530	COG2124	cytochrome p450
DNQ11_13565	COG0561	phosphatase activity
DNQ11_13575	COG5002	protein histidine kinase activity
DNQ11_13585	COG1819	glycosyl
DNQ11_13590	COG1794	racemase activity, acting on amino acids and derivatives
DNQ11_13600	COG1122	ATPase activity
DNQ11_13615	COG2205	protein histidine kinase activity
DNQ11_13630	COG0604	alcohol dehydrogenase
DNQ11_13645	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DNQ11_13680	COG0693	protein deglycase activity
DNQ11_13720	COG2814	Major facilitator Superfamily
DNQ11_13740	COG0584	glycerophosphoryl diester phosphodiesterase
DNQ11_13760	COG0697	spore germination
DNQ11_13800	COG2223	nitrite transmembrane transporter activity
DNQ11_13815	COG2816	NAD+ diphosphatase activity
DNQ11_13820	COG0592	DNA-directed DNA polymerase activity
DNQ11_13825	COG1051	belongs to the nudix hydrolase family
DNQ11_13860	COG3878	Protein conserved in bacteria
DNQ11_13915	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DNQ11_13930	COG0322	excinuclease ABC activity
DNQ11_13975	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DNQ11_14000	COG1011	Hydrolase
DNQ11_14020	COG0076	glutamate decarboxylase activity
DNQ11_14035	COG1523	belongs to the glycosyl hydrolase 13 family
DNQ11_14040	COG3227	Zinc metalloprotease (Elastase)
DNQ11_14060	COG0201	protein transport
DNQ11_14070	COG0697	spore germination
DNQ11_14075	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DNQ11_14105	COG4129	membrane
DNQ11_14110	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DNQ11_14125	COG2959	enzyme of heme biosynthesis
DNQ11_14130	COG3409	Peptidoglycan-binding domain 1 protein
DNQ11_14130	COG3773	Cell wall hydrolase
DNQ11_14145	COG3483	tryptophan 2,3-dioxygenase activity
DNQ11_14150	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
DNQ11_14155	COG3844	kynureninase activity
DNQ11_14160	COG1309	transcriptional regulator
DNQ11_14195	COG3284	Transcriptional regulator
DNQ11_14215	COG1349	DNA-binding transcription factor activity
DNQ11_14235	COG1959	2 iron, 2 sulfur cluster binding
DNQ11_14255	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DNQ11_14260	COG0508	dehydrogenase complex catalyzes the overall conversion of
DNQ11_14265	COG0022	dehydrogenase e1 component
DNQ11_14270	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
DNQ11_14280	COG1028	Short-chain dehydrogenase reductase Sdr
DNQ11_14285	COG0456	acetyltransferase
DNQ11_14285	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
DNQ11_14320	COG4176	ABC-type proline glycine betaine transport system permease component
DNQ11_14325	COG4175	Glycine betaine
DNQ11_14325	COG0517	IMP dehydrogenase activity
DNQ11_14335	COG0740	serine-type endopeptidase activity
DNQ11_14350	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
DNQ11_14355	COG2153	protein acetylation
DNQ11_14360	COG3397	chitin binding
DNQ11_14375	COG2205	protein histidine kinase activity
DNQ11_14405	COG0658	competence protein
DNQ11_14405	COG2333	competence protein COMEC
DNQ11_14455	COG3973	AAA domain
DNQ11_14470	COG2105	PFAM AIG2 family protein
DNQ11_14475	COG0514	ATP-dependent DNA helicase (RecQ)
DNQ11_14505	COG4637	Psort location Cytoplasmic, score
DNQ11_14530	COG3397	chitin binding
DNQ11_14545	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DNQ11_14550	COG1115	amino acid carrier protein
DNQ11_14555	COG1012	belongs to the aldehyde dehydrogenase family
DNQ11_14560	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DNQ11_14570	COG3938	Belongs to the proline racemase family
DNQ11_14575	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DNQ11_14615	COG0586	Pfam SNARE associated Golgi protein
DNQ11_14630	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
DNQ11_14635	COG0519	Catalyzes the synthesis of GMP from XMP
DNQ11_14640	COG4166	transmembrane transport
DNQ11_14650	COG4948	Mandelate Racemase Muconate Lactonizing
DNQ11_14705	COG2936	dipeptidyl-peptidase activity
DNQ11_14710	COG5002	protein histidine kinase activity
DNQ11_14750	COG1164	Oligoendopeptidase f
DNQ11_14765	COG1307	EDD domain protein, DegV family
DNQ11_14790	COG2814	Major facilitator Superfamily
DNQ11_14800	COG1664	Polymer-forming cytoskeletal
DNQ11_14805	COG0789	Transcriptional regulator
DNQ11_14810	COG4533	DNA binding
DNQ11_14815	COG0477	Major facilitator Superfamily
DNQ11_14815	COG2814	Major facilitator Superfamily
DNQ11_14835	COG2261	transglycosylase associated protein
DNQ11_14850	COG2226	methyltransferase
DNQ11_14890	COG0436	Aminotransferase
DNQ11_14895	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
DNQ11_14900	COG5146	pantothenate kinase activity
DNQ11_14920	COG1131	(ABC) transporter
DNQ11_14970	COG0628	permease
DNQ11_14985	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DNQ11_14990	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DNQ11_14995	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
DNQ11_15000	COG1116	anion transmembrane transporter activity
DNQ11_15040	COG2746	aminoglycoside 3-N-acetyltransferase activity
DNQ11_15070	COG0697	spore germination
DNQ11_15075	COG2318	DinB family
DNQ11_15095	COG4912	Dna alkylation repair
DNQ11_15110	COG0726	polysaccharide deacetylase
DNQ11_15120	COG0861	Integral membrane protein TerC family
DNQ11_15125	COG1368	sulfuric ester hydrolase activity
DNQ11_15135	COG0488	(ABC) transporter
DNQ11_15145	COG1033	growth of symbiont in host cell
DNQ11_15145	COG2409	Drug exporters of the RND superfamily
DNQ11_15150	COG1033	growth of symbiont in host cell
DNQ11_15150	COG2409	Drug exporters of the RND superfamily
DNQ11_15155	COG1033	growth of symbiont in host cell
DNQ11_15155	COG2409	Drug exporters of the RND superfamily
DNQ11_15160	COG1309	transcriptional regulator
DNQ11_15175	COG0287	Prephenate dehydrogenase
DNQ11_15180	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
DNQ11_15185	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
DNQ11_15195	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
DNQ11_15195	COG1605	Chorismate mutase
DNQ11_15240	COG1388	LysM domain
DNQ11_15240	COG3584	3D domain protein
DNQ11_15255	COG1595	DNA-templated transcription, initiation
DNQ11_15280	COG1879	ABC-type sugar transport system periplasmic component
DNQ11_15290	COG1172	Belongs to the binding-protein-dependent transport system permease family
DNQ11_15300	COG2390	Transcriptional regulator
DNQ11_15335	COG2329	Antibiotic biosynthesis monooxygenase
DNQ11_15355	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DNQ11_15365	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
DNQ11_15375	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DNQ11_15380	COG4187	Peptidase family M20/M25/M40
DNQ11_15385	COG1414	Transcriptional regulator
DNQ11_15395	COG0833	amino acid
DNQ11_15400	COG1690	Belongs to the RtcB family
DNQ11_15405	COG3239	Fatty acid desaturase
DNQ11_15410	COG1785	Belongs to the alkaline phosphatase family
DNQ11_15420	COG3655	Transcriptional regulator
DNQ11_15435	COG4377	Putative membrane peptidase family (DUF2324)
DNQ11_15445	COG3279	Response regulator of the LytR AlgR family
DNQ11_15455	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DNQ11_15460	COG0346	lactoylglutathione lyase activity
DNQ11_15480	COG0714	Associated with various cellular activities
DNQ11_15505	COG0463	Glycosyl transferase, family 2
DNQ11_15530	COG0463	Glycosyl transferase, family 2
DNQ11_15540	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
DNQ11_15545	COG0753	catalase activity
DNQ11_15580	COG0714	Associated with various cellular activities
DNQ11_15590	COG0778	Nitroreductase
DNQ11_15595	COG1846	Transcriptional regulator
DNQ11_15635	COG1725	Transcriptional regulator
DNQ11_15650	COG1136	(ABC) transporter
DNQ11_15650	COG0577	efflux transmembrane transporter activity
DNQ11_15675	COG2207	Transcriptional regulator
DNQ11_15680	COG0456	acetyltransferase
DNQ11_15700	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DNQ11_15720	COG0642	Histidine kinase
DNQ11_15725	COG0745	RESPONSE REGULATOR receiver
DNQ11_15730	COG0596	Alpha beta hydrolase
DNQ11_15760	COG0730	response to heat
DNQ11_15770	COG0833	amino acid
DNQ11_15780	COG4335	DNA alkylation repair
DNQ11_15830	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
DNQ11_15870	COG1984	allophanate hydrolase subunit 2
DNQ11_15875	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
DNQ11_15880	COG1414	Transcriptional regulator
DNQ11_15895	COG0860	N-Acetylmuramoyl-L-alanine amidase
DNQ11_15900	COG0640	Transcriptional regulator
DNQ11_15910	COG1960	acyl-CoA dehydrogenase activity
DNQ11_15945	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
DNQ11_15960	COG0574	Belongs to the PEP-utilizing enzyme family
DNQ11_15960	COG3848	Pyruvate phosphate dikinase
DNQ11_15970	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DNQ11_15985	COG5577	PFAM Coat F domain
DNQ11_15995	COG3403	YqcI/YcgG family
DNQ11_16000	COG1280	lysine exporter protein (LysE YggA)
DNQ11_16035	COG1063	alcohol dehydrogenase
DNQ11_16050	COG1027	Aspartate ammonia-lyase
DNQ11_16055	COG0252	asparaginase activity
DNQ11_16060	COG1396	sequence-specific DNA binding
DNQ11_16070	COG0322	excinuclease ABC activity
DNQ11_16075	COG0531	amino acid
DNQ11_16080	COG1114	Component of the transport system for branched-chain amino acids
DNQ11_16085	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DNQ11_16095	COG0281	malic enzyme
DNQ11_16110	COG0531	amino acid
DNQ11_16115	COG0697	spore germination
DNQ11_16125	COG0784	Response regulator, receiver
DNQ11_16135	COG2066	Belongs to the glutaminase family
DNQ11_16140	COG1115	amino acid carrier protein
DNQ11_16175	COG0753	catalase activity
DNQ11_16180	COG2267	carboxylic ester hydrolase activity
DNQ11_16185	COG1335	isochorismatase
DNQ11_16205	COG0583	DNA-binding transcription factor activity
DNQ11_16215	COG1846	Transcriptional regulator
DNQ11_16260	COG0415	Belongs to the DNA photolyase family
DNQ11_16265	COG0288	reversible hydration of carbon dioxide
DNQ11_16275	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
DNQ11_16280	COG5609	conserved protein (DUF2294)
DNQ11_16300	COG1575	Belongs to the MenA family. Type 1 subfamily
DNQ11_16305	COG2267	carboxylic ester hydrolase activity
DNQ11_16315	COG0803	Belongs to the bacterial solute-binding protein 9 family
DNQ11_16320	COG1108	ABC-type Mn2 Zn2 transport systems permease components
DNQ11_16325	COG1121	(ABC) transporter
DNQ11_16355	COG0798	PFAM Bile acid sodium symporter
DNQ11_16360	COG0346	lactoylglutathione lyase activity
DNQ11_16365	COG0640	Transcriptional regulator
DNQ11_16380	COG0443	Heat shock 70 kDa protein
DNQ11_16400	COG1522	sequence-specific DNA binding
DNQ11_16415	COG0346	lactoylglutathione lyase activity
DNQ11_16440	COG2169	Transcriptional regulator
DNQ11_16490	COG2814	Major facilitator Superfamily
DNQ11_16520	COG0745	RESPONSE REGULATOR receiver
DNQ11_16525	COG5002	protein histidine kinase activity
DNQ11_16525	COG3850	Histidine kinase
DNQ11_16560	COG2515	1-aminocyclopropane-1-carboxylate deaminase
DNQ11_16590	COG1476	TRANSCRIPTIONal
DNQ11_16605	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DNQ11_16610	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DNQ11_16620	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DNQ11_16625	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
DNQ11_16640	COG1136	(ABC) transporter
DNQ11_16645	COG0577	efflux transmembrane transporter activity
DNQ11_16660	COG5002	protein histidine kinase activity
DNQ11_16660	COG3850	Histidine kinase
DNQ11_16670	COG2364	Membrane
DNQ11_16675	COG1846	Transcriptional regulator
DNQ11_16685	COG2808	Putative FMN-binding domain
DNQ11_16690	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DNQ11_16695	COG2271	Major facilitator Superfamily
DNQ11_16700	COG1556	Lactate utilization protein
DNQ11_16705	COG1139	Iron-sulfur cluster binding protein
DNQ11_16715	COG0583	DNA-binding transcription factor activity
DNQ11_16725	COG1619	proteins homologs of microcin C7 resistance protein MccF
DNQ11_16755	COG0738	Major facilitator superfamily
DNQ11_16760	COG0673	inositol 2-dehydrogenase activity
DNQ11_16765	COG0561	phosphatase activity
DNQ11_16775	COG1609	Transcriptional regulator
DNQ11_16780	COG0457	Tetratricopeptide repeat
DNQ11_16800	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
DNQ11_16830	COG0534	Mate efflux family protein
DNQ11_16850	COG2184	nucleotidyltransferase activity
DNQ11_16855	COG2814	Major facilitator Superfamily
DNQ11_16860	COG1309	transcriptional regulator
DNQ11_16875	COG0814	amino acid
DNQ11_16880	COG1760	l-serine dehydratase
DNQ11_16885	COG1760	l-serine dehydratase
DNQ11_16900	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
DNQ11_16905	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
DNQ11_16915	COG1335	isochorismatase
DNQ11_16920	COG1522	sequence-specific DNA binding
DNQ11_16925	COG0531	amino acid
DNQ11_16945	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
DNQ11_16965	COG1595	DNA-templated transcription, initiation
DNQ11_16980	COG0662	Cupin 2, conserved barrel domain protein
DNQ11_16990	COG2207	Transcriptional regulator
DNQ11_16990	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DNQ11_17045	COG0477	Major facilitator Superfamily
DNQ11_17055	COG1846	Transcriptional regulator
DNQ11_17060	COG2814	Major facilitator Superfamily
DNQ11_17075	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
DNQ11_17100	COG2076	Multidrug Resistance protein
DNQ11_17105	COG1309	transcriptional regulator
DNQ11_17115	COG2031	fatty acid transporter
DNQ11_17125	COG2249	NAD(P)H dehydrogenase (quinone) activity
DNQ11_17155	COG1122	ATPase activity
DNQ11_17160	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
DNQ11_17175	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
DNQ11_17180	COG1288	antiporter activity
DNQ11_17185	COG2356	endonuclease I
DNQ11_17200	COG3620	sequence-specific DNA binding
DNQ11_17205	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
DNQ11_17210	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
DNQ11_17215	COG0124	histidyl-tRNA synthetase
DNQ11_17230	COG1733	regulation of RNA biosynthetic process
DNQ11_17235	COG0778	Nitroreductase
DNQ11_17260	COG1028	Short-chain dehydrogenase reductase Sdr
DNQ11_17270	COG1131	(ABC) transporter
DNQ11_17295	COG1011	Hydrolase
DNQ11_17330	COG0346	lactoylglutathione lyase activity
DNQ11_17335	COG1940	carbohydrate kinase activity
DNQ11_17340	COG0738	Major facilitator superfamily
DNQ11_17345	COG0110	maltose O-acetyltransferase activity
DNQ11_17355	COG1136	(ABC) transporter
DNQ11_17365	COG0180	Tryptophanyl-tRNA synthetase
DNQ11_17370	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
DNQ11_17375	COG0628	permease
DNQ11_17395	COG2226	methyltransferase
DNQ11_17405	COG0477	Major facilitator Superfamily
DNQ11_17435	COG1253	flavin adenine dinucleotide binding
DNQ11_17440	COG0789	Transcriptional regulator
DNQ11_17445	COG0697	spore germination
DNQ11_17450	COG1357	PFAM Pentapeptide repeats (8 copies)
DNQ11_17455	COG3813	Protein conserved in bacteria
DNQ11_17465	COG2706	6-phosphogluconolactonase activity
DNQ11_17470	COG1070	Carbohydrate kinase
DNQ11_17480	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
DNQ11_17485	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
DNQ11_17495	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
DNQ11_17500	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
DNQ11_17505	COG0604	alcohol dehydrogenase
DNQ11_17510	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DNQ11_17530	COG1028	Short-chain dehydrogenase reductase Sdr
DNQ11_17555	COG0656	L-ascorbic acid biosynthetic process
DNQ11_17560	COG2814	Major facilitator Superfamily
DNQ11_17580	COG0346	lactoylglutathione lyase activity
DNQ11_17585	COG0814	amino acid
DNQ11_17610	COG1393	Belongs to the ArsC family
DNQ11_17620	COG1733	regulation of RNA biosynthetic process
DNQ11_17625	COG2188	Transcriptional regulator
DNQ11_17635	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
DNQ11_17640	COG1733	regulation of RNA biosynthetic process
DNQ11_17645	COG1733	regulation of RNA biosynthetic process
DNQ11_17660	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DNQ11_17680	COG0384	phenazine biosynthesis protein PhzF
DNQ11_17690	COG1028	Short-chain dehydrogenase reductase Sdr
DNQ11_17700	COG0318	PFAM AMP-dependent synthetase and ligase
DNQ11_17710	COG1733	regulation of RNA biosynthetic process
DNQ11_17745	COG1191	sigma factor activity
DNQ11_17760	COG1309	transcriptional regulator
DNQ11_17780	COG3152	Membrane
DNQ11_17810	COG1151	hydroxylamine reductase activity
DNQ11_17825	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DNQ11_17830	COG3757	hydrolase, family 25
DNQ11_17830	COG3409	Peptidoglycan-binding domain 1 protein
DNQ11_17865	COG2072	flavoprotein involved in K transport
DNQ11_17900	COG0604	alcohol dehydrogenase
DNQ11_17905	COG1113	amino acid transport
DNQ11_17910	COG2814	Major facilitator Superfamily
DNQ11_17945	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
DNQ11_17950	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
DNQ11_17980	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DNQ11_17985	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DNQ11_17990	COG3739	integral membrane protein
DNQ11_17995	COG0384	phenazine biosynthesis protein PhzF
DNQ11_18025	COG0583	DNA-binding transcription factor activity
DNQ11_18045	COG1193	negative regulation of DNA recombination
DNQ11_18070	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DNQ11_18100	COG0584	glycerophosphoryl diester phosphodiesterase
DNQ11_18125	COG0640	Transcriptional regulator
DNQ11_18130	COG0604	alcohol dehydrogenase
DNQ11_18150	COG2808	Putative FMN-binding domain
DNQ11_18155	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
DNQ11_18165	COG0385	Bile acid
DNQ11_18170	COG0277	FAD linked oxidase domain protein
DNQ11_18215	COG1024	Enoyl-CoA hydratase
DNQ11_18225	COG1285	pathogenesis
DNQ11_18240	COG2514	catechol 2,3-dioxygenase activity
DNQ11_18245	COG2720	vancomycin resistance protein
DNQ11_18275	COG1278	Cold shock
DNQ11_18285	COG0716	FMN binding
DNQ11_18315	COG1028	Short-chain dehydrogenase reductase Sdr
DNQ11_18325	COG0165	Argininosuccinate lyase
DNQ11_18340	COG4145	pantothenate transmembrane transporter activity
DNQ11_18350	COG1012	belongs to the aldehyde dehydrogenase family
DNQ11_18355	COG1028	Short-chain dehydrogenase reductase Sdr
DNQ11_18365	COG1657	PFAM Prenyltransferase squalene oxidase
DNQ11_18370	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
DNQ11_18375	COG2962	Rard protein
DNQ11_18380	COG3326	Membrane
DNQ11_18395	COG0489	protein tyrosine kinase activity
DNQ11_18405	COG0314	molybdopterin synthase activity
DNQ11_18410	COG0303	'Molybdopterin
DNQ11_18415	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
DNQ11_18420	COG2116	formate transmembrane transporter activity
DNQ11_18435	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
DNQ11_18440	COG5609	conserved protein (DUF2294)
DNQ11_18445	COG2427	Protein of unknown function (DUF1641)
DNQ11_18450	COG3383	formate dehydrogenase (NAD+) activity
DNQ11_18460	COG0697	spore germination
DNQ11_18500	COG2226	methyltransferase
DNQ11_18505	COG4166	transmembrane transport
DNQ11_18510	COG4166	transmembrane transport
DNQ11_18515	COG4166	transmembrane transport
DNQ11_18520	COG1301	dicarboxylic acid transport
DNQ11_18525	COG1316	TRANSCRIPTIONal
DNQ11_18535	COG1595	DNA-templated transcription, initiation
DNQ11_18555	COG1131	(ABC) transporter
DNQ11_18565	COG0673	inositol 2-dehydrogenase activity
DNQ11_18570	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
DNQ11_18575	COG0187	DNA topoisomerase II activity
DNQ11_18585	COG1832	CoA-binding protein
DNQ11_18590	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DNQ11_18595	COG0745	RESPONSE REGULATOR receiver
DNQ11_18610	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
DNQ11_18615	COG4841	protein insertion into membrane
DNQ11_18620	COG0824	Thioesterase
DNQ11_18655	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DNQ11_18665	COG2274	protein secretion by the type I secretion system
DNQ11_18670	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
DNQ11_18680	COG0726	polysaccharide deacetylase
DNQ11_18710	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
DNQ11_18725	COG0183	Belongs to the thiolase family
DNQ11_18730	COG0318	PFAM AMP-dependent synthetase and ligase
DNQ11_18735	COG1268	BioY protein
DNQ11_18740	COG0318	PFAM AMP-dependent synthetase and ligase
DNQ11_18795	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DNQ11_18810	COG5002	protein histidine kinase activity
DNQ11_18815	COG0400	carboxylic ester hydrolase activity
DNQ11_18820	COG0346	lactoylglutathione lyase activity
DNQ11_18825	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DNQ11_18830	COG0069	glutamate synthase activity
DNQ11_18835	COG1902	pentaerythritol trinitrate reductase activity
DNQ11_18840	COG1329	Transcriptional regulator
DNQ11_18845	COG0010	Belongs to the arginase family
DNQ11_18870	COG2226	methyltransferase
DNQ11_18930	COG4846	Membrane protein involved in cytochrome C biogenesis
DNQ11_18935	COG0785	Cytochrome C biogenesis protein
DNQ11_18950	COG0583	DNA-binding transcription factor activity
DNQ11_18955	COG1380	Effector of murein hydrolase LrgA
DNQ11_18960	COG1346	cytolysis
DNQ11_18985	COG5632	N-Acetylmuramoyl-L-alanine amidase
DNQ11_18985	COG3409	Peptidoglycan-binding domain 1 protein
DNQ11_19000	COG1132	(ABC) transporter
DNQ11_19005	COG1132	(ABC) transporter
DNQ11_19045	COG3639	organic phosphonate transmembrane transporter activity
DNQ11_19050	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
DNQ11_19070	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
DNQ11_19090	COG1695	Transcriptional regulator
DNQ11_19135	COG5632	N-Acetylmuramoyl-L-alanine amidase
DNQ11_19135	COG1388	LysM domain
DNQ11_19135	COG3409	Peptidoglycan-binding domain 1 protein
DNQ11_19140	COG4824	toxin secretion phage lysis holin
DNQ11_19300	COG1595	DNA-templated transcription, initiation
DNQ11_19345	COG1351	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NAD(P)H and FADH(2) as the reductant
DNQ11_19435	COG1396	sequence-specific DNA binding
DNQ11_19460	COG0174	glutamine synthetase
DNQ11_19465	COG0789	Transcriptional regulator
DNQ11_19470	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
DNQ11_19480	COG2860	membrane
DNQ11_19490	COG0464	growth
DNQ11_19520	COG3584	3D domain protein
DNQ11_19520	COG1388	LysM domain
DNQ11_19530	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DNQ11_19530	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DNQ11_19530	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DNQ11_19535	COG1105	Belongs to the carbohydrate kinase PfkB family
DNQ11_19540	COG1349	DNA-binding transcription factor activity
DNQ11_19550	COG2322	membrane
DNQ11_19585	COG1408	metallophosphoesterase
DNQ11_19590	COG2116	formate transmembrane transporter activity
DNQ11_19605	COG2217	Heavy metal translocating P-type atpase
DNQ11_19610	COG2608	mercury ion transmembrane transporter activity
DNQ11_19615	COG1937	Protein conserved in bacteria
DNQ11_19625	COG2819	hydrolase of the alpha beta superfamily
DNQ11_19630	COG1120	ATPase activity
DNQ11_19635	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DNQ11_19640	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DNQ11_19650	COG0708	Exodeoxyribonuclease III
DNQ11_19655	COG2169	Transcriptional regulator
DNQ11_19660	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
DNQ11_19665	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
DNQ11_19675	COG2364	Membrane
DNQ11_19690	COG2267	carboxylic ester hydrolase activity
DNQ11_19695	COG0346	lactoylglutathione lyase activity
DNQ11_19700	COG3300	MHYT domain
DNQ11_19700	COG5001	Diguanylate cyclase
DNQ11_19720	COG1346	cytolysis
DNQ11_19725	COG1380	Effector of murein hydrolase LrgA
DNQ11_19730	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DNQ11_19735	COG0596	Alpha beta hydrolase
DNQ11_19735	COG0508	dehydrogenase complex catalyzes the overall conversion of
DNQ11_19740	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
DNQ11_19760	COG1404	Belongs to the peptidase S8 family
DNQ11_19765	COG3773	Cell wall hydrolase
DNQ11_19770	COG0562	UDP-galactopyranose mutase
DNQ11_19775	COG1368	sulfuric ester hydrolase activity
DNQ11_19790	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
DNQ11_19835	COG4550	Control of competence regulator ComK, YlbF/YmcA
DNQ11_19840	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
DNQ11_19845	COG1013	pyruvate-flavodoxin oxidoreductase activity
DNQ11_19850	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
DNQ11_19850	COG0674	pyruvate-flavodoxin oxidoreductase activity
DNQ11_19860	COG2359	stage V sporulation protein S
DNQ11_19865	COG1692	metallophosphoesterase
DNQ11_19890	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
DNQ11_19895	COG1426	Protein conserved in bacteria
DNQ11_19910	COG0300	oxidoreductase activity
DNQ11_19915	COG0612	Peptidase, M16
DNQ11_19920	COG0612	Peptidase, M16
DNQ11_19945	COG2188	Transcriptional regulator
DNQ11_19950	COG1674	ftsk spoiiie
DNQ11_19960	COG0740	serine-type endopeptidase activity
DNQ11_19965	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
DNQ11_19980	COG0527	aspartate kinase activity
DNQ11_19985	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
DNQ11_19990	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
DNQ11_19995	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DNQ11_20005	COG1873	PFAM PRC-barrel domain
DNQ11_20010	COG0612	Peptidase, M16
DNQ11_20015	COG0726	polysaccharide deacetylase
DNQ11_20030	COG0196	riboflavin kinase activity
DNQ11_20035	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
DNQ11_20045	COG1550	Protein conserved in bacteria
DNQ11_20055	COG1358	cellular component organization or biogenesis
DNQ11_20060	COG2740	Nucleic-acid-binding protein implicated in transcription termination
DNQ11_20065	COG0195	Participates in both transcription termination and antitermination
DNQ11_20090	COG0750	zinc metalloprotease
DNQ11_20095	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
DNQ11_20100	COG4589	Belongs to the CDS family
DNQ11_20105	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
DNQ11_20115	COG0528	UMP kinase activity
DNQ11_20145	COG4974	Belongs to the 'phage' integrase family
DNQ11_20155	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
DNQ11_20165	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
DNQ11_20205	COG1837	Belongs to the UPF0109 family
DNQ11_20215	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
DNQ11_20225	COG0552	protein localization to endoplasmic reticulum
DNQ11_20230	COG1196	nuclear chromosome segregation
DNQ11_20245	COG1028	Short-chain dehydrogenase reductase Sdr
DNQ11_20250	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
DNQ11_20265	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
DNQ11_20270	COG1461	Dihydroxyacetone kinase
DNQ11_20275	COG1302	Protein conserved in bacteria
DNQ11_20290	COG1564	THIamine pyrophosphokinase
DNQ11_20295	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
DNQ11_20300	COG1162	GTPase activity
DNQ11_20305	COG2815	serine threonine protein kinase
DNQ11_20305	COG0515	serine threonine protein kinase
DNQ11_20310	COG0631	protein serine/threonine phosphatase activity
DNQ11_20320	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
DNQ11_20320	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
DNQ11_20330	COG0242	peptide deformylase activity
DNQ11_20335	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
DNQ11_20340	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
DNQ11_20350	COG0194	GDP metabolic process
DNQ11_20360	COG1561	YicC-like family, N-terminal region
DNQ11_20365	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
DNQ11_20375	COG0006	proline dipeptidase activity
DNQ11_20395	COG3069	C4-dicarboxylate transmembrane transporter activity
DNQ11_20435	COG0505	Belongs to the CarA family
DNQ11_20460	COG0564	pseudouridine synthase activity
DNQ11_20475	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
DNQ11_20480	COG3599	regulation of cell shape
DNQ11_20485	COG2302	S4 RNA-binding domain
DNQ11_20490	COG0762	integral membrane protein
DNQ11_20500	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
DNQ11_20510	COG1873	PFAM PRC-barrel domain
DNQ11_20515	COG1191	sigma factor activity
DNQ11_20520	COG1191	sigma factor activity
DNQ11_20530	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
DNQ11_20535	COG0849	cell division
DNQ11_20540	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
DNQ11_20545	COG0812	UDP-N-acetylmuramate dehydrogenase activity
DNQ11_20550	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
DNQ11_20555	COG0772	Belongs to the SEDS family
DNQ11_20570	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
DNQ11_20575	COG0768	penicillin binding
DNQ11_20585	COG4839	cell division protein FtsL
DNQ11_20600	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
DNQ11_20620	COG1399	metal-binding, possibly nucleic acid-binding protein
DNQ11_20670	COG4824	toxin secretion phage lysis holin
DNQ11_20760	COG4626	Terminase
DNQ11_20760	COG1802	Transcriptional regulator
DNQ11_20785	COG0582	viral genome integration into host DNA
DNQ11_20875	COG1191	sigma factor activity
DNQ11_20900	COG1484	DNA-dependent DNA replication
DNQ11_20930	COG1396	sequence-specific DNA binding
DNQ11_20950	COG1396	sequence-specific DNA binding
DNQ11_20970	COG0582	viral genome integration into host DNA
DNQ11_20980	COG3480	Lon protease (S16) C-terminal proteolytic domain
DNQ11_20985	COG1752	Esterase of the alpha-beta hydrolase superfamily
DNQ11_20990	COG3314	Sporulation integral membrane protein YlbJ
DNQ11_21000	COG0742	ribosomal rna small subunit methyltransferase
DNQ11_21015	COG3679	Belongs to the UPF0342 family
DNQ11_21020	COG0406	alpha-ribazole phosphatase activity
DNQ11_21035	COG2340	Cysteine-rich secretory protein family
DNQ11_21050	COG3336	cytochrome c oxidase
DNQ11_21085	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
DNQ11_21095	COG0772	Belongs to the SEDS family
DNQ11_21100	COG4838	Belongs to the UPF0358 family
DNQ11_21105	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
DNQ11_21110	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
DNQ11_21120	COG4896	Protein conserved in bacteria
DNQ11_21145	COG0483	inositol monophosphate 1-phosphatase activity
DNQ11_21165	COG1982	Orn Lys Arg decarboxylase major
DNQ11_21210	COG0508	dehydrogenase complex catalyzes the overall conversion of
DNQ11_21215	COG0022	dehydrogenase e1 component
DNQ11_21220	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
DNQ11_21230	COG0242	peptide deformylase activity
DNQ11_21235	COG0561	phosphatase activity
DNQ11_21250	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
DNQ11_21255	COG0569	domain protein
DNQ11_21275	COG0583	DNA-binding transcription factor activity
DNQ11_21280	COG0517	IMP dehydrogenase activity
DNQ11_21290	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
DNQ11_21300	COG4703	Protein of unknown function (DUF1797)
DNQ11_21315	COG2200	EAL domain
DNQ11_21320	COG1028	Short-chain dehydrogenase reductase Sdr
DNQ11_21325	COG1408	metallophosphoesterase
DNQ11_21340	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
DNQ11_21380	COG2814	Major facilitator Superfamily
DNQ11_21400	COG3209	COG3209 Rhs family protein
DNQ11_21415	COG2205	protein histidine kinase activity
DNQ11_21425	COG0436	Aminotransferase
DNQ11_21430	COG1609	Transcriptional regulator
DNQ11_21435	COG3833	ABC-type maltose transport systems, permease component
DNQ11_21440	COG1175	transmembrane transport
DNQ11_21445	COG2182	Extracellular solute-binding protein
DNQ11_21455	COG0366	Alpha amylase catalytic
DNQ11_21460	COG3842	ATPase activity
DNQ11_21500	COG0183	Belongs to the thiolase family
DNQ11_21540	COG1695	Transcriptional regulator
DNQ11_21545	COG1028	Short-chain dehydrogenase reductase Sdr
DNQ11_21565	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
DNQ11_21570	COG0436	Aminotransferase
DNQ11_21590	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
DNQ11_21615	COG3706	GGDEF domain
DNQ11_21620	COG0778	Nitroreductase
DNQ11_21645	COG1263	PTS System
DNQ11_21645	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DNQ11_21645	COG2190	(PTS) system
DNQ11_21650	COG3711	transcriptional antiterminator
DNQ11_21670	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
DNQ11_21700	COG1547	Domain of unknown function (DUF309)
DNQ11_21705	COG0456	acetyltransferase
DNQ11_21715	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
DNQ11_21720	COG4086	secreted protein
DNQ11_21725	COG0561	phosphatase activity
DNQ11_21730	COG0697	spore germination
DNQ11_21745	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DNQ11_21770	COG0733	neurotransmitter:sodium symporter activity
DNQ11_21790	COG1686	Belongs to the peptidase S11 family
DNQ11_21800	COG1725	Transcriptional regulator
DNQ11_21805	COG1131	(ABC) transporter
DNQ11_21825	COG1846	Transcriptional regulator
DNQ11_21840	COG0598	Magnesium transport protein CorA
DNQ11_21865	COG4974	Belongs to the 'phage' integrase family
DNQ11_21875	COG0735	belongs to the Fur family
DNQ11_21880	COG1300	Membrane
DNQ11_21900	COG0667	Aldo Keto reductase
DNQ11_21905	COG0656	L-ascorbic acid biosynthetic process
DNQ11_21910	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
DNQ11_21910	COG0456	acetyltransferase
DNQ11_21920	COG0737	Belongs to the 5'-nucleotidase family
DNQ11_21920	COG1525	nuclease
DNQ11_21920	COG4085	toxin activity
DNQ11_21930	COG0596	Alpha beta hydrolase
DNQ11_21935	COG2056	Na+-H+ antiporter family
DNQ11_21940	COG1609	Transcriptional regulator
DNQ11_21945	COG0456	acetyltransferase
DNQ11_21950	COG1073	alpha beta
DNQ11_21965	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DNQ11_21965	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DNQ11_21970	COG0307	riboflavin synthase, alpha
DNQ11_21990	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
DNQ11_21995	COG4106	trans-aconitate 2-methyltransferase activity
DNQ11_22000	COG2226	methyltransferase
DNQ11_22000	COG1073	alpha beta
DNQ11_22005	COG0156	8-amino-7-oxononanoate synthase activity
DNQ11_22015	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
DNQ11_22035	COG0737	Belongs to the 5'-nucleotidase family
DNQ11_22045	COG1522	sequence-specific DNA binding
DNQ11_22065	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
DNQ11_22075	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
DNQ11_22090	COG0300	oxidoreductase activity
DNQ11_22100	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DNQ11_22105	COG1760	l-serine dehydratase
DNQ11_22110	COG1760	l-serine dehydratase
DNQ11_22135	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
DNQ11_22145	COG2195	Cleaves the N-terminal amino acid of tripeptides
DNQ11_22150	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DNQ11_22165	COG1376	ErfK ybiS ycfS ynhG family protein
DNQ11_22170	COG4129	membrane
DNQ11_22175	COG1126	abc transporter atp-binding protein
DNQ11_22180	COG0765	amino acid transport
DNQ11_22185	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DNQ11_22205	COG2816	NAD+ diphosphatase activity
DNQ11_22210	COG0772	Belongs to the SEDS family
DNQ11_22220	COG0508	dehydrogenase complex catalyzes the overall conversion of
DNQ11_22225	COG0022	dehydrogenase e1 component
DNQ11_22230	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
DNQ11_22235	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DNQ11_22245	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
DNQ11_22250	COG0280	phosphate acetyltransferase
DNQ11_22260	COG3290	protein histidine kinase activity
DNQ11_22260	COG3829	transcription factor binding
DNQ11_22270	COG0584	glycerophosphoryl diester phosphodiesterase
DNQ11_22275	COG3093	addiction module antidote protein HigA
DNQ11_22285	COG0745	RESPONSE REGULATOR receiver
DNQ11_22295	COG0750	zinc metalloprotease
DNQ11_22300	COG0497	DNA recombination
DNQ11_22310	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
DNQ11_22320	COG0142	geranyltranstransferase activity
DNQ11_22345	COG1302	Protein conserved in bacteria
DNQ11_22350	COG0439	Biotin carboxylase
DNQ11_22355	COG0511	ligase activity, forming carbon-carbon bonds
DNQ11_22400	COG3854	ATPases associated with a variety of cellular activities
DNQ11_22425	COG0006	proline dipeptidase activity
DNQ11_22440	COG3872	metal-dependent enzyme
DNQ11_22450	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DNQ11_22470	COG0095	Lipoate-protein ligase
DNQ11_22475	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DNQ11_22480	COG1609	Transcriptional regulator
DNQ11_22490	COG2076	Multidrug Resistance protein
DNQ11_22495	COG2076	Multidrug Resistance protein
DNQ11_22535	COG1131	(ABC) transporter
DNQ11_22540	COG1725	Transcriptional regulator
DNQ11_22575	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
DNQ11_22635	COG4970	Tfp pilus assembly protein FimT
DNQ11_22645	COG1459	type II secretion system
DNQ11_22650	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
DNQ11_22700	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
DNQ11_22705	COG1410	methionine synthase
DNQ11_22705	COG0646	methionine synthase
DNQ11_22710	COG0646	methionine synthase
DNQ11_22710	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
DNQ11_22715	COG0626	cystathionine gamma-synthase activity
DNQ11_22720	COG0626	cystathionine gamma-synthase activity
DNQ11_22740	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DNQ11_22750	COG1940	carbohydrate kinase activity
DNQ11_22755	COG4483	Protein conserved in bacteria
DNQ11_22760	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
DNQ11_22770	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
DNQ11_22775	COG0704	Plays a role in the regulation of phosphate uptake
DNQ11_22780	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
DNQ11_22785	COG0581	inorganic phosphate transmembrane transporter activity
DNQ11_22790	COG0573	inorganic phosphate transmembrane transporter activity
DNQ11_22795	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
DNQ11_22805	COG0477	Major facilitator Superfamily
DNQ11_22810	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
DNQ11_22835	COG0735	belongs to the Fur family
DNQ11_22840	COG1108	ABC-type Mn2 Zn2 transport systems permease components
DNQ11_22845	COG1121	(ABC) transporter
DNQ11_22850	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DNQ11_22880	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
DNQ11_22885	COG2384	SAM-dependent methyltransferase
DNQ11_22890	COG2010	Cytochrome c
DNQ11_22895	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
DNQ11_22900	COG0358	DNA primase activity
DNQ11_22920	COG0517	IMP dehydrogenase activity
DNQ11_22935	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
DNQ11_22940	COG0295	cytidine deaminase activity
DNQ11_22945	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
DNQ11_22955	COG1480	7TM receptor with intracellular HD hydrolase
DNQ11_22960	COG1702	phosphate starvation-inducible protein PhoH
DNQ11_22980	COG1610	YqeY-like protein
DNQ11_22995	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
DNQ11_23000	COG1385	rRNA (uridine-N3-)-methyltransferase activity
DNQ11_23020	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
DNQ11_23030	COG0635	Involved in the biosynthesis of porphyrin-containing compound
DNQ11_23035	COG1733	regulation of RNA biosynthetic process
DNQ11_23060	COG1466	dna polymerase III delta subunit
DNQ11_23070	COG0658	competence protein
DNQ11_23070	COG2333	competence protein COMEC
DNQ11_23075	COG2131	deaminase
DNQ11_23080	COG1596	polysaccharide export
DNQ11_23080	COG1555	photosystem II stabilization
DNQ11_23085	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DNQ11_23090	COG2226	methyltransferase
DNQ11_23095	COG0799	negative regulation of ribosome biogenesis
DNQ11_23100	COG1713	HD superfamily hydrolase involved in NAD metabolism
DNQ11_23110	COG1534	Rna-binding protein
DNQ11_23120	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
DNQ11_23125	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
DNQ11_23140	COG1191	sigma factor activity
DNQ11_23155	COG1595	DNA-templated transcription, initiation
DNQ11_23165	COG0778	Nitroreductase
DNQ11_23170	COG2357	RelA SpoT domain protein
DNQ11_23180	COG1785	Belongs to the alkaline phosphatase family
DNQ11_23190	COG2267	carboxylic ester hydrolase activity
DNQ11_23225	COG1404	Belongs to the peptidase S8 family
DNQ11_23230	COG3186	Phenylalanine-4-hydroxylase
DNQ11_23245	COG2259	Doxx family
DNQ11_23285	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DNQ11_23295	COG1454	alcohol dehydrogenase
DNQ11_23295	COG1012	belongs to the aldehyde dehydrogenase family
DNQ11_23300	COG0626	cystathionine gamma-synthase activity
DNQ11_23305	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
DNQ11_23330	COG0768	penicillin binding
DNQ11_23360	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
DNQ11_23380	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
DNQ11_23390	COG0628	permease
DNQ11_23410	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
DNQ11_23420	COG0482	sulfurtransferase activity
DNQ11_23425	COG1104	cysteine desulfurase activity
DNQ11_23430	COG1959	2 iron, 2 sulfur cluster binding
DNQ11_23435	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
DNQ11_23445	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
DNQ11_23455	COG0124	histidyl-tRNA synthetase
DNQ11_23475	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
DNQ11_23485	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
DNQ11_23485	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
DNQ11_23490	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
DNQ11_23495	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
DNQ11_23495	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
DNQ11_23505	COG2244	polysaccharide biosynthetic process
DNQ11_23510	COG2323	membrane
DNQ11_23520	COG1862	Preprotein translocase
DNQ11_23550	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
DNQ11_23560	COG0697	spore germination
DNQ11_23565	COG0697	spore germination
DNQ11_23570	COG0640	Transcriptional regulator
DNQ11_23595	COG0157	Belongs to the NadC ModD family
DNQ11_23600	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
DNQ11_23605	COG1104	cysteine desulfurase activity
DNQ11_23610	COG1827	regulation of RNA biosynthetic process
DNQ11_23615	COG2258	MOSC domain
DNQ11_23620	COG0077	Prephenate dehydratase
DNQ11_23625	COG0577	efflux transmembrane transporter activity
DNQ11_23630	COG0577	efflux transmembrane transporter activity
DNQ11_23635	COG1136	(ABC) transporter
DNQ11_23645	COG0745	RESPONSE REGULATOR receiver
DNQ11_23650	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
DNQ11_23655	COG3290	protein histidine kinase activity
DNQ11_23665	COG2868	ribosomal protein
DNQ11_23675	COG1530	ribonuclease E activity
DNQ11_23680	COG1994	Peptidase M50
DNQ11_23685	COG0739	heme binding
DNQ11_23690	COG2894	cell division
DNQ11_23705	COG1792	Involved in formation and maintenance of cell shape
DNQ11_23710	COG1077	Cell shape determining protein MreB Mrl
DNQ11_23735	COG0285	dihydrofolate synthase activity
DNQ11_23740	COG0525	valine-tRNA ligase activity
DNQ11_23750	COG1388	LysM domain
DNQ11_23760	COG0113	porphobilinogen synthase activity
DNQ11_23765	COG1587	Uroporphyrinogen-III synthase
DNQ11_23775	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
DNQ11_23785	COG1846	Transcriptional regulator
DNQ11_23790	COG1764	response to oxidative stress
DNQ11_23805	COG1067	ATP-dependent peptidase activity
DNQ11_23805	COG0470	DNA polymerase III
DNQ11_23860	COG0622	Phosphoesterase
DNQ11_23875	COG5401	PFAM Sporulation and spore germination
DNQ11_23895	COG1309	transcriptional regulator
DNQ11_23910	COG2197	response regulator
DNQ11_23915	COG2233	PERMEase
DNQ11_23925	COG0402	S-adenosylhomocysteine deaminase activity
DNQ11_23930	COG0402	S-adenosylhomocysteine deaminase activity
DNQ11_23950	COG0444	Belongs to the ABC transporter superfamily
DNQ11_23955	COG4608	Belongs to the ABC transporter superfamily
DNQ11_23965	COG3279	Response regulator of the LytR AlgR family
DNQ11_23980	COG1983	PspC domain protein
DNQ11_23985	COG1396	sequence-specific DNA binding
DNQ11_23990	COG0697	spore germination
DNQ11_24000	COG1959	2 iron, 2 sulfur cluster binding
DNQ11_24005	COG1668	transmembrane transport
DNQ11_24010	COG4152	abc transporter atp-binding protein
DNQ11_24015	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
DNQ11_24025	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
DNQ11_24030	COG1876	peptidase activity
DNQ11_24035	COG0824	Thioesterase
DNQ11_24040	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
DNQ11_24045	COG1053	succinate dehydrogenase
DNQ11_24050	COG2009	succinate dehydrogenase
DNQ11_24055	COG1719	4-vinyl reductase, 4VR
DNQ11_24065	COG3118	belongs to the thioredoxin family
DNQ11_24070	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
DNQ11_24075	COG2086	electron transfer activity
DNQ11_24080	COG1024	Enoyl-CoA hydratase
DNQ11_24085	COG1309	transcriptional regulator
DNQ11_24090	COG0318	PFAM AMP-dependent synthetase and ligase
DNQ11_24115	COG2318	DinB family
DNQ11_24145	COG1131	(ABC) transporter
DNQ11_24150	COG2205	protein histidine kinase activity
DNQ11_24155	COG0745	RESPONSE REGULATOR receiver
DNQ11_24165	COG4895	conserved protein (DUF2196)
DNQ11_24170	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
DNQ11_24185	COG4509	Sortase family
DNQ11_24190	COG1120	ATPase activity
DNQ11_24205	COG5386	Cell surface protein
DNQ11_24215	COG5386	Cell surface protein
DNQ11_24220	COG1114	Component of the transport system for branched-chain amino acids
DNQ11_24225	COG1187	pseudouridine synthase activity
DNQ11_24240	COG1796	DNA polymerase
DNQ11_24240	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
DNQ11_24245	COG1286	toxin biosynthetic process
DNQ11_24275	COG0017	Asparaginyl-tRNA synthetase
DNQ11_24280	COG0072	phenylalanine-tRNA ligase activity
DNQ11_24280	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DNQ11_24290	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DNQ11_24300	COG1418	mRNA catabolic process
DNQ11_24325	COG2814	Major facilitator Superfamily
DNQ11_24330	COG1566	PFAM secretion protein HlyD family protein
DNQ11_24335	COG1309	transcriptional regulator
DNQ11_24340	COG1363	Peptidase, m42
DNQ11_24360	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
DNQ11_24365	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
DNQ11_24375	COG1484	DNA-dependent DNA replication
DNQ11_24380	COG3611	Membrane attachment protein
DNQ11_24390	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
DNQ11_24400	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
DNQ11_24405	COG0237	dephospho-CoA kinase activity
DNQ11_24410	COG1971	Probably functions as a manganese efflux pump
DNQ11_24415	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
DNQ11_24420	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DNQ11_24420	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DNQ11_24425	COG5002	protein histidine kinase activity
DNQ11_24430	COG0745	RESPONSE REGULATOR receiver
DNQ11_24455	COG0538	isocitrate dehydrogenase activity
DNQ11_24460	COG0372	Belongs to the citrate synthase family
DNQ11_24475	COG0628	permease
DNQ11_24480	COG3030	protein affecting phage T7 exclusion by the F plasmid
DNQ11_24505	COG1725	Transcriptional regulator
DNQ11_24510	COG0281	malic enzyme
DNQ11_24515	COG0587	DNA-directed DNA polymerase activity
DNQ11_24530	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
DNQ11_24555	COG4109	DRTGG domain
DNQ11_24570	COG0006	proline dipeptidase activity
DNQ11_24610	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DNQ11_24615	COG0662	Cupin 2, conserved barrel domain protein
DNQ11_24625	COG1476	TRANSCRIPTIONal
DNQ11_24640	COG1028	Short-chain dehydrogenase reductase Sdr
DNQ11_24645	COG0589	response to stress
DNQ11_24695	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DNQ11_24715	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
DNQ11_24720	COG0827	DNA restriction-modification system
DNQ11_24725	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
DNQ11_24730	COG3874	Sporulation protein YtfJ
DNQ11_24740	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
DNQ11_24745	COG1574	metal-dependent hydrolase with the TIM-barrel fold
DNQ11_24755	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
DNQ11_24770	COG1104	cysteine desulfurase activity
DNQ11_24780	COG0583	DNA-binding transcription factor activity
DNQ11_24785	COG0697	spore germination
DNQ11_24795	COG1956	GAF domain-containing protein
DNQ11_24800	COG0626	cystathionine gamma-synthase activity
DNQ11_24825	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
DNQ11_24835	COG1595	DNA-templated transcription, initiation
DNQ11_24850	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
DNQ11_24855	COG0454	-acetyltransferase
DNQ11_24860	COG0517	IMP dehydrogenase activity
DNQ11_24865	COG0123	including yeast histone deacetylase and acetoin utilization protein
DNQ11_24875	COG0745	RESPONSE REGULATOR receiver
DNQ11_24885	COG0666	response to abiotic stimulus
DNQ11_24920	COG1609	Transcriptional regulator
DNQ11_24930	COG4851	CamS sex pheromone cAM373 precursor
DNQ11_24935	COG3118	belongs to the thioredoxin family
DNQ11_24945	COG2309	aminopeptidase activity
DNQ11_24965	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DNQ11_24980	COG1674	ftsk spoiiie
DNQ11_24990	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DNQ11_24995	COG4848	Belongs to the UPF0354 family
DNQ11_25000	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DNQ11_25005	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
DNQ11_25010	COG1363	Peptidase, m42
DNQ11_25020	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DNQ11_25035	COG0510	thiamine kinase activity
DNQ11_25040	COG1523	belongs to the glycosyl hydrolase 13 family
DNQ11_25060	COG1349	DNA-binding transcription factor activity
DNQ11_25065	COG1187	pseudouridine synthase activity
DNQ11_25070	COG2244	polysaccharide biosynthetic process
DNQ11_25075	COG2081	HI0933 family
DNQ11_25080	COG2814	Major facilitator Superfamily
DNQ11_25090	COG3832	glyoxalase III activity
DNQ11_25115	COG1329	Transcriptional regulator
DNQ11_25125	COG4975	Glucose uptake
DNQ11_25140	COG0314	molybdopterin synthase activity
DNQ11_25145	COG1763	Mo-molybdopterin cofactor biosynthetic process
DNQ11_25150	COG0303	'Molybdopterin
DNQ11_25160	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
DNQ11_25185	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DNQ11_25195	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
DNQ11_25240	COG2814	Major facilitator Superfamily
DNQ11_25245	COG0475	glutathione-regulated potassium exporter activity
DNQ11_25250	COG0490	domain, Protein
DNQ11_25255	COG0582	viral genome integration into host DNA
DNQ11_25265	COG1136	(ABC) transporter
DNQ11_25285	COG1242	4 iron, 4 sulfur cluster binding
DNQ11_25290	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
DNQ11_25300	COG1131	(ABC) transporter
DNQ11_25310	COG1794	racemase activity, acting on amino acids and derivatives
DNQ11_25335	COG2267	carboxylic ester hydrolase activity
DNQ11_25340	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
DNQ11_25345	COG0671	phosphoesterase, PA-phosphatase related
DNQ11_25350	COG0438	transferase activity, transferring glycosyl groups
DNQ11_25360	COG0521	Mo-molybdopterin cofactor biosynthetic process
DNQ11_25420	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
DNQ11_25425	COG5002	protein histidine kinase activity
DNQ11_25430	COG4191	Histidine kinase
DNQ11_25435	COG2267	carboxylic ester hydrolase activity
DNQ11_25440	COG1368	sulfuric ester hydrolase activity
DNQ11_25460	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
DNQ11_25465	COG1116	anion transmembrane transporter activity
DNQ11_25470	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DNQ11_25495	COG0494	nUDIX hydrolase
DNQ11_25530	COG0288	reversible hydration of carbon dioxide
DNQ11_25535	COG1271	oxidase subunit
DNQ11_25540	COG1294	oxidase, subunit
DNQ11_25565	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DNQ11_25590	COG1842	Phage shock protein A
DNQ11_25625	COG5002	protein histidine kinase activity
DNQ11_25630	COG0745	RESPONSE REGULATOR receiver
DNQ11_25660	COG1597	lipid kinase activity
DNQ11_25700	COG0586	Pfam SNARE associated Golgi protein
DNQ11_25710	COG0577	efflux transmembrane transporter activity
DNQ11_25715	COG1136	(ABC) transporter
DNQ11_25720	COG2207	Transcriptional regulator
DNQ11_25720	COG3708	Transcriptional regulator
DNQ11_25725	COG0745	RESPONSE REGULATOR receiver
DNQ11_25730	COG2205	protein histidine kinase activity
DNQ11_25740	COG0577	efflux transmembrane transporter activity
DNQ11_25745	COG1136	(ABC) transporter
DNQ11_25785	COG3964	amidohydrolase
DNQ11_25815	COG4948	Mandelate Racemase Muconate Lactonizing
DNQ11_25825	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
DNQ11_25830	COG0596	Alpha beta hydrolase
DNQ11_25835	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
DNQ11_25840	COG1169	isochorismate synthase
DNQ11_25845	COG1575	Belongs to the MenA family. Type 1 subfamily
DNQ11_25850	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
DNQ11_25855	COG1278	Cold shock
DNQ11_25875	COG0058	SHG alpha-glucan phosphorylase activity
DNQ11_25880	COG0297	glycogen (starch) synthase activity
DNQ11_25885	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
DNQ11_25890	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
DNQ11_25915	COG0039	L-malate dehydrogenase activity
DNQ11_26015	COG0544	peptidyl-prolyl cis-trans isomerase activity
DNQ11_26055	COG1285	pathogenesis
DNQ11_26060	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
DNQ11_26070	COG0166	Belongs to the GPI family
DNQ11_26080	COG2155	Conserved Protein
DNQ11_26085	COG1098	S1 RNA binding domain
DNQ11_26090	COG0436	Aminotransferase
DNQ11_26095	COG1522	sequence-specific DNA binding
DNQ11_26100	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DNQ11_26105	COG2267	carboxylic ester hydrolase activity
DNQ11_26115	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
DNQ11_26130	COG5018	Exonuclease
DNQ11_26135	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
DNQ11_26155	COG0423	glycine-tRNA ligase activity
DNQ11_26160	COG2050	protein possibly involved in aromatic compounds catabolism
DNQ11_26170	COG1268	BioY protein
DNQ11_26180	COG1210	Utp--glucose-1-phosphate uridylyltransferase
DNQ11_26185	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
DNQ11_26200	COG3584	3D domain protein
DNQ11_26215	COG1252	NADH dehydrogenase
DNQ11_26230	COG3708	Transcriptional regulator
DNQ11_26245	COG1683	Conserved Protein
DNQ11_26265	COG0316	Belongs to the HesB IscA family
DNQ11_26280	COG1252	NADH dehydrogenase
DNQ11_26295	COG0390	transport system, permease component
DNQ11_26300	COG2824	Alkylphosphonate utilization operon protein PhnA
DNQ11_26340	COG4837	Protein of unknown function (DUF1462)
DNQ11_26345	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
DNQ11_26360	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
DNQ11_26365	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
DNQ11_26375	COG2249	NAD(P)H dehydrogenase (quinone) activity
DNQ11_26380	COG0647	UMP catabolic process
DNQ11_26390	COG2445	Protein of unknown function DUF86
DNQ11_26395	COG1494	fructose-1,6-bisphosphatase
DNQ11_26415	COG4470	Protein conserved in bacteria
DNQ11_26425	COG0789	Transcriptional regulator
DNQ11_26430	COG4377	Putative membrane peptidase family (DUF2324)
DNQ11_26455	COG0739	heme binding
DNQ11_26465	COG3377	Domain of unknown function (DUF1805)
DNQ11_26470	COG0737	Belongs to the 5'-nucleotidase family
DNQ11_26485	COG1695	Transcriptional regulator
DNQ11_26500	COG0719	Fe-S assembly protein
DNQ11_26505	COG0822	iron-sulfur transferase activity
DNQ11_26510	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
DNQ11_26515	COG0719	Fe-S assembly protein
DNQ11_26520	COG0396	ATPase activity
DNQ11_26525	COG1464	Belongs to the NlpA lipoprotein family
DNQ11_26530	COG1464	Belongs to the NlpA lipoprotein family
DNQ11_26535	COG2011	ABC-type metal ion transport system permease component
DNQ11_26540	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
DNQ11_26550	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DNQ11_26555	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
DNQ11_26575	COG1393	Belongs to the ArsC family
DNQ11_26630	COG0039	L-malate dehydrogenase activity
DNQ11_26655	COG1309	transcriptional regulator
DNQ11_26660	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DNQ11_26665	COG1960	acyl-CoA dehydrogenase activity
DNQ11_26675	COG0183	Belongs to the thiolase family
DNQ11_26680	COG1250	3-hydroxyacyl-CoA dehydrogenase
DNQ11_26680	COG1024	Enoyl-CoA hydratase
DNQ11_26695	COG1686	Belongs to the peptidase S11 family
DNQ11_26710	COG0011	TIGRFAM Protein of
DNQ11_26715	COG0840	transmembrane signaling receptor activity
DNQ11_26735	COG2814	Major facilitator Superfamily
DNQ11_26740	COG0531	amino acid
DNQ11_26750	COG0706	membrane insertase activity
DNQ11_26760	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DNQ11_26800	COG0586	Pfam SNARE associated Golgi protein
DNQ11_26810	COG1376	ErfK ybiS ycfS ynhG family protein
DNQ11_26815	COG0745	RESPONSE REGULATOR receiver
DNQ11_26820	COG5002	protein histidine kinase activity
DNQ11_26830	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DNQ11_26845	COG2151	metal-sulfur cluster biosynthetic enzyme
DNQ11_26850	COG3227	Zinc metalloprotease (Elastase)
DNQ11_26855	COG1741	Belongs to the pirin family
DNQ11_26870	COG0475	glutathione-regulated potassium exporter activity
DNQ11_26875	COG0490	domain, Protein
DNQ11_26885	COG1115	amino acid carrier protein
DNQ11_26890	COG0783	Belongs to the Dps family
DNQ11_26905	COG1611	Belongs to the LOG family
DNQ11_26925	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DNQ11_26930	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DNQ11_26935	COG1115	amino acid carrier protein
DNQ11_26940	COG1115	amino acid carrier protein
DNQ11_26945	COG2910	NAD(P)H-binding
DNQ11_26975	COG0656	L-ascorbic acid biosynthetic process
DNQ11_26980	COG2814	Major facilitator Superfamily
DNQ11_26985	COG1733	regulation of RNA biosynthetic process
DNQ11_26995	COG1252	NADH dehydrogenase
DNQ11_27000	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
DNQ11_27005	COG0812	UDP-N-acetylmuramate dehydrogenase activity
DNQ11_27015	COG0840	transmembrane signaling receptor activity
DNQ11_27015	COG3290	protein histidine kinase activity
DNQ11_27025	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
DNQ11_27030	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
DNQ11_27045	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DNQ11_27050	COG3223	Belongs to the PsiE family
DNQ11_27110	COG0557	exoribonuclease II activity
DNQ11_27115	COG1647	Serine aminopeptidase, S33
DNQ11_27120	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
DNQ11_27125	COG1346	cytolysis
DNQ11_27235	COG4695	Portal protein
DNQ11_27260	COG4974	Belongs to the 'phage' integrase family
DNQ11_27270	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
DNQ11_27275	COG0149	triose-phosphate isomerase activity
DNQ11_27285	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
DNQ11_27300	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
DNQ11_27325	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DNQ11_27340	COG2323	membrane
DNQ11_27345	COG0740	serine-type endopeptidase activity
DNQ11_27355	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
DNQ11_27365	COG0391	Required for morphogenesis under gluconeogenic growth conditions
DNQ11_27375	COG1051	belongs to the nudix hydrolase family
DNQ11_27385	COG0492	ferredoxin-NADP+ reductase activity
DNQ11_27390	COG0457	Tetratricopeptide repeat
DNQ11_27395	COG0110	maltose O-acetyltransferase activity
DNQ11_27415	COG1950	PFAM Membrane protein of
DNQ11_27425	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
DNQ11_27430	COG0556	nucleotide-excision repair
DNQ11_27450	COG0789	Transcriptional regulator
DNQ11_27485	COG0583	DNA-binding transcription factor activity
DNQ11_27495	COG0655	NAD(P)H dehydrogenase (quinone) activity
DNQ11_27510	COG1132	(ABC) transporter
DNQ11_27515	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DNQ11_27520	COG0793	Belongs to the peptidase S41A family
DNQ11_27520	COG3409	Peptidoglycan-binding domain 1 protein
DNQ11_27525	COG2177	Part of the ABC transporter FtsEX involved in
DNQ11_27530	COG2884	Cell division ATP-binding protein ftsE
DNQ11_27550	COG0653	protein targeting
DNQ11_27555	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
DNQ11_27560	COG1278	Cold shock
DNQ11_27565	COG1040	competence protein
DNQ11_27570	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
DNQ11_27575	COG1388	LysM domain
DNQ11_27575	COG0791	NLP P60 protein
DNQ11_27580	COG1733	regulation of RNA biosynthetic process
DNQ11_27590	COG1307	EDD domain protein, DegV family
DNQ11_27595	COG1739	Uncharacterized protein family UPF0029
DNQ11_27600	COG1316	TRANSCRIPTIONal
DNQ11_27605	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
DNQ11_27610	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
DNQ11_27615	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
DNQ11_27625	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
DNQ11_27625	COG3933	PFAM sigma-54 factor interaction domain-containing protein
DNQ11_27640	COG3394	polysaccharide catabolic process
DNQ11_27645	COG1486	melibiose metabolic process
DNQ11_27650	COG1447	Phosphotransferase system cellobiose-specific component IIA
DNQ11_27655	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DNQ11_27665	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
DNQ11_27670	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
DNQ11_27675	COG1447	Phosphotransferase system cellobiose-specific component IIA
DNQ11_27685	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DNQ11_27690	COG1301	dicarboxylic acid transport
DNQ11_27700	COG0346	lactoylglutathione lyase activity
DNQ11_27705	COG1511	domain protein
DNQ11_27710	COG0583	DNA-binding transcription factor activity
DNQ11_27715	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
DNQ11_27735	COG1271	oxidase subunit
DNQ11_27740	COG1294	oxidase, subunit
DNQ11_27745	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
DNQ11_27755	COG1620	l-lactate permease
DNQ11_27765	COG2389	metal-binding protein
DNQ11_27780	COG1368	sulfuric ester hydrolase activity
DNQ11_27800	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DNQ11_27810	COG1215	transferase activity, transferring glycosyl groups
DNQ11_27820	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DNQ11_27830	COG3584	3D domain protein
DNQ11_27830	COG1388	LysM domain
DNQ11_27855	COG4715	Zinc finger, swim domain protein
DNQ11_27860	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
DNQ11_27890	COG1191	sigma factor activity
DNQ11_27900	COG0577	efflux transmembrane transporter activity
DNQ11_27905	COG1136	(ABC) transporter
DNQ11_27940	COG5002	protein histidine kinase activity
DNQ11_27945	COG0745	RESPONSE REGULATOR receiver
DNQ11_27950	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
DNQ11_27970	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
DNQ11_27975	COG1134	teichoic acid transport
DNQ11_27980	COG1682	transport, permease protein
DNQ11_27985	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
DNQ11_28030	COG1609	Transcriptional regulator
DNQ11_28045	COG0739	heme binding
DNQ11_28065	COG2385	sporulation resulting in formation of a cellular spore
DNQ11_28070	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
DNQ11_28080	COG4836	Membrane
DNQ11_28090	COG1007	ATP synthesis coupled electron transport
DNQ11_28095	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DNQ11_28100	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
DNQ11_28110	COG0839	Belongs to the complex I subunit 6 family
DNQ11_28125	COG0649	NAD binding
DNQ11_28130	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DNQ11_28140	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DNQ11_28145	COG5001	Diguanylate cyclase
DNQ11_28145	COG3300	MHYT domain
DNQ11_28195	COG0356	it plays a direct role in the translocation of protons across the membrane
DNQ11_28230	COG0698	ribose 5-phosphate isomerase
DNQ11_28245	COG2190	(PTS) system
DNQ11_28250	COG2259	Doxx family
DNQ11_28255	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
DNQ11_28275	COG0009	L-threonylcarbamoyladenylate synthase
DNQ11_28290	COG2890	protein-(glutamine-N5) methyltransferase activity
DNQ11_28295	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
DNQ11_28310	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
DNQ11_28315	COG1494	fructose-1,6-bisphosphatase
DNQ11_28325	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
DNQ11_28340	COG4821	SIS domain
DNQ11_28350	COG3343	RNA polymerase activity
DNQ11_28360	COG1960	acyl-CoA dehydrogenase activity
DNQ11_28365	COG1960	acyl-CoA dehydrogenase activity
DNQ11_28370	COG1250	3-hydroxyacyl-CoA dehydrogenase
DNQ11_28375	COG0183	Belongs to the thiolase family
DNQ11_28380	COG0247	lactate metabolic process
DNQ11_28380	COG2181	nitrate reductase activity
DNQ11_28385	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DNQ11_28395	COG5001	Diguanylate cyclase
DNQ11_28395	COG3300	MHYT domain
DNQ11_28415	COG2197	response regulator
DNQ11_28420	COG4585	Histidine kinase
DNQ11_28425	COG0842	Transport permease protein
DNQ11_28430	COG1131	(ABC) transporter
DNQ11_28435	COG0024	Methionine aminopeptidase
DNQ11_28455	COG2234	aminopeptidase activity
DNQ11_28475	COG1595	DNA-templated transcription, initiation
DNQ11_28480	COG0018	arginyl-trna synthetase
DNQ11_28485	COG4506	Protein conserved in bacteria
DNQ11_28490	COG1619	proteins homologs of microcin C7 resistance protein MccF
DNQ11_28510	COG0010	Belongs to the arginase family
DNQ11_28515	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
DNQ11_28520	COG2814	Major facilitator Superfamily
DNQ11_28525	COG0789	Transcriptional regulator
DNQ11_28530	COG0584	glycerophosphoryl diester phosphodiesterase
DNQ11_28535	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DNQ11_28550	COG1994	Peptidase M50
DNQ11_28560	COG1078	dGTPase activity
DNQ11_28565	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DNQ11_28575	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DNQ11_28600	COG0095	Lipoate-protein ligase
DNQ11_28605	COG0280	phosphate acetyltransferase
DNQ11_28620	COG3773	Cell wall hydrolase
DNQ11_28630	COG2363	Small membrane protein
DNQ11_28640	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
DNQ11_28645	COG2233	PERMEase
DNQ11_28650	COG0561	phosphatase activity
DNQ11_28655	COG2814	Major facilitator Superfamily
DNQ11_28665	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
DNQ11_28670	COG1131	(ABC) transporter
DNQ11_28675	COG2755	lipolytic protein G-D-S-L family
DNQ11_28680	COG1609	Transcriptional regulator
DNQ11_28715	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DNQ11_28725	COG2197	response regulator
DNQ11_28735	COG0351	phosphomethylpyrimidine kinase
DNQ11_28740	COG3706	GGDEF domain
DNQ11_28745	COG2879	small protein
DNQ11_28750	COG1966	Carbon starvation protein
DNQ11_28755	COG3279	Response regulator of the LytR AlgR family
DNQ11_28760	COG0477	Major facilitator Superfamily
DNQ11_28785	COG0840	transmembrane signaling receptor activity
DNQ11_28795	COG1607	acyl-coa hydrolase
DNQ11_28810	COG0488	(ABC) transporter
DNQ11_28840	COG0463	Glycosyl transferase, family 2
DNQ11_28845	COG1309	transcriptional regulator
DNQ11_28850	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DNQ11_28855	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
DNQ11_28855	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
DNQ11_28860	COG0628	permease
DNQ11_28875	COG3279	Response regulator of the LytR AlgR family
DNQ11_28880	COG3275	phosphorelay sensor kinase activity
DNQ11_28885	COG2814	Major facilitator Superfamily
DNQ11_28890	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DNQ11_28895	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
DNQ11_28905	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
DNQ11_28925	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
DNQ11_28930	COG1272	protein, Hemolysin III
DNQ11_28950	COG0516	GMP reductase activity
DNQ11_28955	COG1164	Oligoendopeptidase f
DNQ11_28975	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DNQ11_28980	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
DNQ11_28985	COG4853	Protein conserved in bacteria
DNQ11_28990	COG4863	YycH protein
DNQ11_28995	COG5002	protein histidine kinase activity
DNQ11_29000	COG0745	RESPONSE REGULATOR receiver
DNQ11_29030	COG0305	Participates in initiation and elongation during chromosome replication
DNQ11_29040	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
DNQ11_29045	COG4241	membrane
DNQ11_29055	COG0629	single-stranded DNA binding
DNQ11_29065	COG0012	GTP binding
DNQ11_29070	COG4481	Protein conserved in bacteria
DNQ11_29075	COG0668	transmembrane transport
DNQ11_29085	COG1475	DNA binding
DNQ11_29090	COG1192	Involved in chromosome partitioning
DNQ11_29110	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
DNQ11_29115	COG1847	R3H domain protein
DNQ11_29120	COG0706	membrane insertase activity
DNQ11_29185	COG3344	reverse transcriptase
DNQ11_29280	COG3344	reverse transcriptase
DNQ11_29490	COG4962	Type ii secretion system protein e
DNQ11_29625	COG2311	Membrane
DNQ11_29645	COG4196	transglutaminase domain protein
DNQ11_29650	COG0671	phosphoesterase, PA-phosphatase related
DNQ11_29680	COG1210	Utp--glucose-1-phosphate uridylyltransferase
DNQ11_29685	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
DNQ11_29875	COG4974	Belongs to the 'phage' integrase family
DNQ11_29930	COG3443	Belongs to the bacterial solute-binding protein 9 family
DNQ11_29945	COG4974	Belongs to the 'phage' integrase family
DNQ11_29970	COG0457	Tetratricopeptide repeat
DNQ11_29975	COG1923	regulation of RNA biosynthetic process
DNQ11_30050	COG0791	NLP P60 protein
DNQ11_30050	COG0741	lytic transglycosylase activity
DNQ11_30215	COG1192	Involved in chromosome partitioning
DNQ11_30270	COG1683	Conserved Protein
DNQ11_30275	COG1309	transcriptional regulator
DNQ11_30360	COG0681	Belongs to the peptidase S26 family
DNQ11_30385	COG1280	lysine exporter protein (LysE YggA)
DNQ11_30425	COG4166	transmembrane transport
DNQ11_30440	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII