locus-tag class description BD64_1 PF00772 DnaB-like helicase N terminal domain BD64_1 PF03796 DnaB-like helicase C terminal domain BD64_10 PF09648 YycH protein BD64_100 PF03009 Glycerophosphoryl diester phosphodiesterase family BD64_1000 PF03900 Porphobilinogen deaminase, C-terminal domain BD64_1000 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BD64_1001 PF02602 Uroporphyrinogen-III synthase HemD BD64_1002 PF00490 Delta-aminolevulinic acid dehydratase BD64_1003 PF00202 Aminotransferase class-III BD64_1004 PF01476 LysM domain BD64_1006 PF10458 Valyl tRNA synthetase tRNA binding arm BD64_1006 PF08264 Anticodon-binding domain of tRNA BD64_1006 PF00133 tRNA synthetases class I (I, L, M and V) BD64_1007 PF08245 Mur ligase middle domain BD64_1007 PF02875 Mur ligase family, glutamate ligase domain BD64_1009 PF02545 Maf-like protein BD64_101 PF13411 MerR HTH family regulatory protein BD64_1010 PF04002 RadC-like JAB domain BD64_1012 PF04085 rod shape-determining protein MreC BD64_1014 PF03775 Septum formation inhibitor MinC, C-terminal domain BD64_1015 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BD64_1016 PF01551 Peptidase family M23 BD64_1017 PF02163 Peptidase family M50 BD64_1018 PF00575 S1 RNA binding domain BD64_1018 PF10150 Ribonuclease E/G family BD64_1019 PF00829 Ribosomal prokaryotic L21 protein BD64_102 PF07690 Major Facilitator Superfamily BD64_1020 PF04327 Cysteine protease Prp BD64_1021 PF01016 Ribosomal L27 protein BD64_1022 PF14682 Sporulation initiation phospho-transferase B, C-terminal BD64_1022 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BD64_1023 PF01926 50S ribosome-binding GTPase BD64_1023 PF01018 GTP1/OBG BD64_1023 PF09269 Domain of unknown function (DUF1967) BD64_1024 PF00072 Response regulator receiver domain BD64_1024 PF00486 Transcriptional regulatory protein, C terminal BD64_1026 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_1027 PF00005 ABC transporter BD64_1028 PF02687 FtsX-like permease family BD64_1029 PF02687 FtsX-like permease family BD64_103 PF17284 Spermidine synthase tetramerisation domain BD64_1030 PF01842 ACT domain BD64_1030 PF00800 Prephenate dehydratase BD64_1031 PF03475 3-alpha domain BD64_1031 PF03473 MOSC domain BD64_1032 PF02829 3H domain BD64_1032 PF08279 HTH domain BD64_1033 PF00266 Aminotransferase class-V BD64_1034 PF00890 FAD binding domain BD64_1034 PF02910 Fumarate reductase flavoprotein C-term BD64_1035 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BD64_1035 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BD64_1036 PF02445 Quinolinate synthetase A protein BD64_1037 PF01476 LysM domain BD64_104 PF00491 Arginase family BD64_1040 PF01022 Bacterial regulatory protein, arsR family BD64_1041 PF00892 EamA-like transporter family BD64_1042 PF00892 EamA-like transporter family BD64_1044 PF01497 Periplasmic binding protein BD64_1045 PF07499 RuvA, C-terminal domain BD64_1045 PF01330 RuvA N terminal domain BD64_1046 PF05496 Holliday junction DNA helicase RuvB P-loop domain BD64_1046 PF05491 RuvB C-terminal winged helix domain BD64_1046 PF17864 RuvB AAA lid domain BD64_1047 PF11146 Protein of unknown function (DUF2905) BD64_1048 PF02547 Queuosine biosynthesis protein BD64_1049 PF01702 Queuine tRNA-ribosyltransferase BD64_1050 PF02699 Preprotein translocase subunit BD64_1052 PF04239 Protein of unknown function (DUF421) BD64_1053 PF14667 Polysaccharide biosynthesis C-terminal domain BD64_1053 PF01943 Polysaccharide biosynthesis protein BD64_1054 PF13797 Post-transcriptional regulator BD64_1055 PF02355 Protein export membrane protein BD64_1055 PF07549 SecD/SecF GG Motif BD64_1056 PF16916 Dimerisation domain of Zinc Transporter BD64_1056 PF01545 Cation efflux family BD64_1057 PF10141 Single-strand DNA-specific exonuclease, C terminal domain BD64_1057 PF17768 RecJ OB domain BD64_1057 PF01368 DHH family BD64_1057 PF02272 DHHA1 domain BD64_1058 PF00156 Phosphoribosyl transferase domain BD64_1059 PF04607 Region found in RelA / SpoT proteins BD64_1059 PF13291 ACT domain BD64_1059 PF02824 TGS domain BD64_1060 PF02580 D-Tyr-tRNA(Tyr) deacylase BD64_1062 PF03129 Anticodon binding domain BD64_1062 PF13393 Histidyl-tRNA synthetase BD64_1063 PF01336 OB-fold nucleic acid binding domain BD64_1063 PF02938 GAD domain BD64_1063 PF00152 tRNA synthetases class II (D, K and N) BD64_1064 PF00899 ThiF family BD64_1066 PF05496 Holliday junction DNA helicase RuvB P-loop domain BD64_1066 PF12002 MgsA AAA+ ATPase C terminal BD64_1066 PF16193 AAA C-terminal domain BD64_1067 PF02082 Transcriptional regulator BD64_1068 PF00266 Aminotransferase class-V BD64_107 PF17676 LD-carboxypeptidase C-terminal domain BD64_107 PF02016 LD-carboxypeptidase N-terminal domain BD64_1071 PF14490 Helix-hairpin-helix containing domain BD64_1071 PF13538 UvrD-like helicase C-terminal domain BD64_1071 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain BD64_1075 PF01594 AI-2E family transporter BD64_1077 PF02272 DHHA1 domain BD64_1077 PF01411 tRNA synthetases class II (A) BD64_1077 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BD64_1078 PF06135 IreB regulatory phosphoprotein BD64_1079 PF03652 Holliday junction resolvase BD64_108 PF09148 Domain of unknown function (DUF1934) BD64_1080 PF06949 Protein of unknown function (DUF1292) BD64_1081 PF02618 YceG-like family BD64_1085 PF00485 Phosphoribulokinase / Uridine kinase family BD64_1086 PF01272 Transcription elongation factor, GreA/GreB, C-term BD64_1086 PF03449 Transcription elongation factor, N-terminal BD64_1087 PF00905 Penicillin binding protein transpeptidase domain BD64_1087 PF03717 Penicillin-binding Protein dimerisation domain BD64_109 PF03485 Arginyl tRNA synthetase N terminal domain BD64_109 PF05746 DALR anticodon binding domain BD64_109 PF00750 tRNA synthetases class I (R) BD64_1090 PF08241 Methyltransferase domain BD64_1091 PF01048 Phosphorylase superfamily BD64_1092 PF00291 Pyridoxal-phosphate dependent enzyme BD64_1093 PF01053 Cys/Met metabolism PLP-dependent enzyme BD64_1094 PF00465 Iron-containing alcohol dehydrogenase BD64_1094 PF00171 Aldehyde dehydrogenase family BD64_1095 PF14143 YrhC-like protein BD64_1096 PF01497 Periplasmic binding protein BD64_1097 PF01032 FecCD transport family BD64_1098 PF00005 ABC transporter BD64_11 PF00753 Metallo-beta-lactamase superfamily BD64_110 PF08281 Sigma-70, region 4 BD64_110 PF04542 Sigma-70 region 2 BD64_1104 PF07681 DoxX BD64_1105 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BD64_1106 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BD64_1108 PF00351 Biopterin-dependent aromatic amino acid hydroxylase BD64_1109 PF02225 PA domain BD64_1109 PF05922 Peptidase inhibitor I9 BD64_1109 PF00082 Subtilase family BD64_1109 PF13860 FlgD Ig-like domain BD64_1116 PF08386 TAP-like protein BD64_1116 PF00561 alpha/beta hydrolase fold BD64_1118 PF00245 Alkaline phosphatase BD64_1120 PF04607 Region found in RelA / SpoT proteins BD64_1121 PF00881 Nitroreductase family BD64_1122 PF00471 Ribosomal protein L33 BD64_1123 PF16244 Domain of unknown function (DUF4901) BD64_1126 PF04545 Sigma-70, region 4 BD64_1126 PF04542 Sigma-70 region 2 BD64_1127 PF02666 Phosphatidylserine decarboxylase BD64_1129 PF01926 50S ribosome-binding GTPase BD64_1130 PF01488 Shikimate / quinate 5-dehydrogenase BD64_1130 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BD64_1130 PF08501 Shikimate dehydrogenase substrate binding domain BD64_1131 PF01985 CRS1 / YhbY (CRM) domain BD64_1132 PF01467 Cytidylyltransferase-like BD64_1133 PF01966 HD domain BD64_1135 PF13649 Methyltransferase domain BD64_1136 PF14748 Pyrroline-5-carboxylate reductase dimerisation BD64_1136 PF03807 NADP oxidoreductase coenzyme F420-dependent BD64_1137 PF10531 SLBB domain BD64_1138 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BD64_1139 PF00753 Metallo-beta-lactamase superfamily BD64_1139 PF13567 Domain of unknown function (DUF4131) BD64_1139 PF03772 Competence protein BD64_114 PF02225 PA domain BD64_114 PF04389 Peptidase family M28 BD64_1140 PF14141 YqzM-like protein BD64_1141 PF06144 DNA polymerase III, delta subunit BD64_1142 PF01649 Ribosomal protein S20 BD64_1143 PF03418 Germination protease BD64_1145 PF06421 GTP-binding protein LepA C-terminus BD64_1145 PF00679 Elongation factor G C-terminus BD64_1145 PF00009 Elongation factor Tu GTP binding domain BD64_1145 PF03144 Elongation factor Tu domain 2 BD64_1146 PF01638 HxlR-like helix-turn-helix BD64_1147 PF06969 HemN C-terminal domain BD64_1147 PF04055 Radical SAM superfamily BD64_1148 PF01628 HrcA protein C terminal domain BD64_1149 PF01025 GrpE BD64_115 PF02324 Glycosyl hydrolase family 70 BD64_115 PF01473 Putative cell wall binding repeat BD64_1150 PF00012 Hsp70 protein BD64_1151 PF01556 DnaJ C terminal domain BD64_1151 PF00684 DnaJ central domain BD64_1151 PF00226 DnaJ domain BD64_1153 PF04452 RNA methyltransferase BD64_1154 PF04055 Radical SAM superfamily BD64_1154 PF00919 Uncharacterized protein family UPF0004 BD64_1154 PF01938 TRAM domain BD64_1155 PF01165 Ribosomal protein S21 BD64_1156 PF09424 Yqey-like protein BD64_1157 PF07873 YabP family BD64_1158 PF06898 Putative stage IV sporulation protein YqfD BD64_1159 PF02562 PhoH-like protein BD64_1160 PF07698 7TM receptor with intracellular HD hydrolase BD64_1160 PF01966 HD domain BD64_1160 PF07697 7TM-HD extracellular BD64_1161 PF02130 Uncharacterized protein family UPF0054 BD64_1162 PF01219 Prokaryotic diacylglycerol kinase BD64_1163 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BD64_1164 PF07650 KH domain BD64_1164 PF01926 50S ribosome-binding GTPase BD64_1166 PF11967 Recombination protein O N terminal BD64_1166 PF02565 Recombination protein O C terminal BD64_1167 PF08279 HTH domain BD64_1167 PF00571 CBS domain BD64_1168 PF03618 Kinase/pyrophosphorylase BD64_1169 PF08275 DNA primase catalytic core, N-terminal domain BD64_1169 PF10410 DnaB-helicase binding domain of primase BD64_1169 PF01807 CHC2 zinc finger BD64_1170 PF04545 Sigma-70, region 4 BD64_1170 PF04542 Sigma-70 region 2 BD64_1170 PF00140 Sigma-70 factor, region 1.2 BD64_1170 PF04539 Sigma-70 region 3 BD64_1170 PF03979 Sigma-70 factor, region 1.1 BD64_1171 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BD64_1172 PF04816 tRNA (adenine(22)-N(1))-methyltransferase BD64_1173 PF01784 NIF3 (NGG1p interacting factor 3) BD64_1174 PF02401 LytB protein BD64_1176 PF00271 Helicase conserved C-terminal domain BD64_1176 PF00270 DEAD/DEAH box helicase BD64_1177 PF01261 Xylose isomerase-like TIM barrel BD64_1178 PF11116 Protein of unknown function (DUF2624) BD64_1179 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BD64_1179 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BD64_118 PF00557 Metallopeptidase family M24 BD64_1180 PF00005 ABC transporter BD64_1181 PF00950 ABC 3 transport family BD64_1182 PF01475 Ferric uptake regulator family BD64_1183 PF04551 GcpE protein BD64_1187 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BD64_1187 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BD64_1188 PF07690 Major Facilitator Superfamily BD64_119 PF00005 ABC transporter BD64_1190 PF12849 PBP superfamily domain BD64_1191 PF00528 Binding-protein-dependent transport system inner membrane component BD64_1192 PF00528 Binding-protein-dependent transport system inner membrane component BD64_1193 PF00005 ABC transporter BD64_1194 PF01895 PhoU domain BD64_1195 PF00483 Nucleotidyl transferase BD64_1196 PF00471 Ribosomal protein L33 BD64_1197 PF01812 5-formyltetrahydrofolate cyclo-ligase family BD64_1198 PF06014 Bacterial protein of unknown function (DUF910) BD64_1199 PF00480 ROK family BD64_12 PF13180 PDZ domain BD64_1200 PF10958 Protein of unknown function (DUF2759) BD64_1201 PF00753 Metallo-beta-lactamase superfamily BD64_1203 PF01022 Bacterial regulatory protein, arsR family BD64_1205 PF01053 Cys/Met metabolism PLP-dependent enzyme BD64_1206 PF01053 Cys/Met metabolism PLP-dependent enzyme BD64_1207 PF02574 Homocysteine S-methyltransferase BD64_1207 PF02219 Methylenetetrahydrofolate reductase BD64_1208 PF02310 B12 binding domain BD64_1208 PF02607 B12 binding domain BD64_1208 PF02965 Vitamin B12 dependent methionine synthase, activation domain BD64_1208 PF02574 Homocysteine S-methyltransferase BD64_1208 PF00809 Pterin binding enzyme BD64_1209 PF03033 Glycosyltransferase family 28 N-terminal domain BD64_1209 PF04101 Glycosyltransferase family 28 C-terminal domain BD64_121 PF07730 Histidine kinase BD64_121 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_1215 PF00375 Sodium:dicarboxylate symporter family BD64_1216 PF11117 Protein of unknown function (DUF2626) BD64_1218 PF00437 Type II/IV secretion system protein BD64_1219 PF00482 Type II secretion system (T2SS), protein F BD64_122 PF00196 Bacterial regulatory proteins, luxR family BD64_122 PF00072 Response regulator receiver domain BD64_1221 PF07963 Prokaryotic N-terminal methylation motif BD64_1226 PF01202 Shikimate kinase BD64_1227 PF14038 YqzE-like protein BD64_1231 PF11079 Bacterial protein YqhG of unknown function BD64_1232 PF00176 SNF2 family N-terminal domain BD64_1232 PF00271 Helicase conserved C-terminal domain BD64_1233 PF01571 Aminomethyltransferase folate-binding domain BD64_1233 PF08669 Glycine cleavage T-protein C-terminal barrel domain BD64_1234 PF02347 Glycine cleavage system P-protein BD64_1235 PF02347 Glycine cleavage system P-protein BD64_1238 PF00392 Bacterial regulatory proteins, gntR family BD64_1239 PF00005 ABC transporter BD64_1246 PF00893 Small Multidrug Resistance protein BD64_1247 PF00893 Small Multidrug Resistance protein BD64_1249 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BD64_1249 PF00356 Bacterial regulatory proteins, lacI family BD64_1250 PF00581 Rhodanese-like domain BD64_1251 PF03099 Biotin/lipoate A/B protein ligase family BD64_1254 PF02742 Iron dependent repressor, metal binding and dimerisation domain BD64_1254 PF01325 Iron dependent repressor, N-terminal DNA binding domain BD64_1256 PF13419 Haloacid dehalogenase-like hydrolase BD64_1257 PF07136 Protein of unknown function (DUF1385) BD64_1258 PF11085 Conserved membrane protein YqhR BD64_1259 PF01220 Dehydroquinase class II BD64_126 PF00563 EAL domain BD64_126 PF00990 Diguanylate cyclase, GGDEF domain BD64_126 PF03707 Bacterial signalling protein N terminal repeat BD64_1260 PF00557 Metallopeptidase family M24 BD64_1260 PF01321 Creatinase/Prolidase N-terminal domain BD64_1261 PF01132 Elongation factor P (EF-P) OB domain BD64_1261 PF08207 Elongation factor P (EF-P) KOW-like domain BD64_1261 PF09285 Elongation factor P, C-terminal BD64_1266 PF09548 Stage III sporulation protein AB (spore_III_AB) BD64_1267 PF06686 Stage III sporulation protein AC/AD protein family BD64_1268 PF06686 Stage III sporulation protein AC/AD protein family BD64_1269 PF09546 Stage III sporulation protein AE (spore_III_AE) BD64_127 PF03851 UV-endonuclease UvdE BD64_1270 PF09581 Stage III sporulation protein AF (Spore_III_AF) BD64_1272 PF12685 SpoIIIAH-like protein BD64_1274 PF00364 Biotin-requiring enzyme BD64_1275 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BD64_1275 PF00289 Biotin carboxylase, N-terminal domain BD64_1275 PF02785 Biotin carboxylase C-terminal domain BD64_1276 PF03780 Asp23 family, cell envelope-related function BD64_1277 PF01029 NusB family BD64_1278 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BD64_1278 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BD64_1279 PF13742 OB-fold nucleic acid binding domain BD64_1279 PF02601 Exonuclease VII, large subunit BD64_128 PF13091 PLD-like domain BD64_1280 PF02609 Exonuclease VII small subunit BD64_1281 PF00348 Polyprenyl synthetase BD64_1282 PF02779 Transketolase, pyrimidine binding domain BD64_1282 PF02780 Transketolase, C-terminal domain BD64_1282 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BD64_1283 PF01479 S4 domain BD64_1283 PF01728 FtsJ-like methyltransferase BD64_1284 PF01316 Arginine repressor, DNA binding domain BD64_1284 PF02863 Arginine repressor, C-terminal domain BD64_1285 PF13476 AAA domain BD64_1286 PF05580 SpoIVB peptidase S55 BD64_1286 PF17820 PDZ domain BD64_1287 PF08769 Sporulation initiation factor Spo0A C terminal BD64_1287 PF00072 Response regulator receiver domain BD64_1289 PF14174 YycC-like protein BD64_129 PF13183 4Fe-4S dicluster domain BD64_129 PF02754 Cysteine-rich domain BD64_1290 PF03009 Glycerophosphoryl diester phosphodiesterase family BD64_1292 PF00158 Sigma-54 interaction domain BD64_1292 PF00989 PAS fold BD64_1292 PF02954 Bacterial regulatory protein, Fis family BD64_1293 PF01515 Phosphate acetyl/butaryl transferase BD64_1294 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BD64_1294 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BD64_1295 PF00871 Acetokinase family BD64_1296 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BD64_1296 PF07992 Pyridine nucleotide-disulphide oxidoreductase BD64_1297 PF00676 Dehydrogenase E1 component BD64_1298 PF02779 Transketolase, pyrimidine binding domain BD64_1298 PF02780 Transketolase, C-terminal domain BD64_1299 PF02817 e3 binding domain BD64_1299 PF00364 Biotin-requiring enzyme BD64_1299 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BD64_130 PF00108 Thiolase, N-terminal domain BD64_130 PF02803 Thiolase, C-terminal domain BD64_1300 PF01098 Cell cycle protein BD64_1301 PF00293 NUDIX domain BD64_1301 PF09297 NADH pyrophosphatase zinc ribbon domain BD64_1302 PF11208 Protein of unknown function (DUF2992) BD64_1303 PF06491 Disulphide isomerase BD64_1304 PF00497 Bacterial extracellular solute-binding proteins, family 3 BD64_1305 PF00528 Binding-protein-dependent transport system inner membrane component BD64_1306 PF00005 ABC transporter BD64_1307 PF11728 Putative aromatic acid exporter C-terminal domain BD64_1307 PF06081 Aromatic acid exporter family member 1 BD64_1308 PF03734 L,D-transpeptidase catalytic domain BD64_131 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BD64_131 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BD64_1310 PF13302 Acetyltransferase (GNAT) domain BD64_1311 PF07687 Peptidase dimerisation domain BD64_1311 PF01546 Peptidase family M20/M25/M40 BD64_1313 PF00817 impB/mucB/samB family BD64_1313 PF11798 IMS family HHH motif BD64_1313 PF11799 impB/mucB/samB family C-terminal domain BD64_1315 PF00753 Metallo-beta-lactamase superfamily BD64_1315 PF12706 Beta-lactamase superfamily domain BD64_1316 PF01842 ACT domain BD64_1316 PF03315 Serine dehydratase beta chain BD64_1317 PF03313 Serine dehydratase alpha chain BD64_1318 PF03807 NADP oxidoreductase coenzyme F420-dependent BD64_1318 PF14748 Pyrroline-5-carboxylate reductase dimerisation BD64_132 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BD64_132 PF02770 Acyl-CoA dehydrogenase, middle domain BD64_132 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BD64_1320 PF00753 Metallo-beta-lactamase superfamily BD64_1321 PF00106 short chain dehydrogenase BD64_1323 PF01118 Semialdehyde dehydrogenase, NAD binding domain BD64_1323 PF02774 Semialdehyde dehydrogenase, dimerisation domain BD64_1324 PF01960 ArgJ family BD64_1325 PF00696 Amino acid kinase family BD64_1326 PF00202 Aminotransferase class-III BD64_1327 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BD64_1327 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BD64_133 PF02770 Acyl-CoA dehydrogenase, middle domain BD64_133 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BD64_133 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BD64_1330 PF13404 AsnC-type helix-turn-helix domain BD64_1330 PF01037 Lrp/AsnC ligand binding domain BD64_1332 PF00149 Calcineurin-like phosphoesterase BD64_1332 PF02872 5'-nucleotidase, C-terminal domain BD64_1335 PF00202 Aminotransferase class-III BD64_1337 PF00155 Aminotransferase class I and II BD64_1338 PF08241 Methyltransferase domain BD64_1338 PF12697 Alpha/beta hydrolase family BD64_1339 PF13847 Methyltransferase domain BD64_1340 PF06968 Biotin and Thiamin Synthesis associated domain BD64_1340 PF04055 Radical SAM superfamily BD64_1341 PF00885 6,7-dimethyl-8-ribityllumazine synthase BD64_1343 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BD64_1343 PF00925 GTP cyclohydrolase II BD64_1344 PF00677 Lumazine binding domain BD64_1345 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BD64_1345 PF01872 RibD C-terminal domain BD64_1347 PF10827 Protein of unknown function (DUF2552) BD64_1348 PF12146 Serine aminopeptidase, S33 BD64_1349 PF00583 Acetyltransferase (GNAT) family BD64_135 PF05066 HB1, ASXL, restriction endonuclease HTH domain BD64_1352 PF03553 Na+/H+ antiporter family BD64_1352 PF13726 Na+-H+ antiporter family BD64_1353 PF12146 Serine aminopeptidase, S33 BD64_1355 PF00746 LPXTG cell wall anchor motif BD64_1355 PF02872 5'-nucleotidase, C-terminal domain BD64_1355 PF00149 Calcineurin-like phosphoesterase BD64_1355 PF00565 Staphylococcal nuclease homologue BD64_1357 PF13673 Acetyltransferase (GNAT) domain BD64_1357 PF04229 GrpB protein BD64_1358 PF00248 Aldo/keto reductase family BD64_1359 PF00248 Aldo/keto reductase family BD64_136 PF00117 Glutamine amidotransferase class-I BD64_136 PF06418 CTP synthase N-terminus BD64_1360 PF13072 Mother cell inhibitor of FtsZ BD64_1361 PF00293 NUDIX domain BD64_1363 PF01944 Stage II sporulation protein M BD64_1364 PF01475 Ferric uptake regulator family BD64_1365 PF14004 Protein of unknown function (DUF4227) BD64_1366 PF02899 Phage integrase, N-terminal SAM-like domain BD64_1366 PF00589 Phage integrase family BD64_1368 PF01676 Metalloenzyme superfamily BD64_1369 PF01048 Phosphorylase superfamily BD64_137 PF10740 Domain of unknown function (DUF2529) BD64_1370 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BD64_1370 PF00591 Glycosyl transferase family, a/b domain BD64_1370 PF02885 Glycosyl transferase family, helical bundle domain BD64_1371 PF01544 CorA-like Mg2+ transporter protein BD64_1372 PF00860 Permease family BD64_1374 PF01047 MarR family BD64_1377 PF00005 ABC transporter BD64_1378 PF00392 Bacterial regulatory proteins, gntR family BD64_1379 PF00768 D-alanyl-D-alanine carboxypeptidase BD64_1379 PF07943 Penicillin-binding protein 5, C-terminal domain BD64_138 PF00072 Response regulator receiver domain BD64_1380 PF01740 STAS domain BD64_1381 PF13581 Histidine kinase-like ATPase domain BD64_1382 PF04545 Sigma-70, region 4 BD64_1382 PF04542 Sigma-70 region 2 BD64_1382 PF04539 Sigma-70 region 3 BD64_1383 PF00209 Sodium:neurotransmitter symporter family BD64_1385 PF12164 Stage V sporulation protein AA BD64_1386 PF13782 Stage V sporulation protein AB BD64_1387 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BD64_1388 PF07451 Stage V sporulation protein AD (SpoVAD) BD64_1389 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BD64_139 PF01116 Fructose-bisphosphate aldolase class-II BD64_1390 PF14097 Stage V sporulation protein AE1 BD64_1391 PF03323 Bacillus/Clostridium GerA spore germination protein BD64_1393 PF06207 Protein of unknown function (DUF1002) BD64_1394 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BD64_1395 PF00583 Acetyltransferase (GNAT) family BD64_1396 PF03745 Domain of unknown function (DUF309) BD64_1398 PF02616 Segregation and condensation protein ScpA BD64_1399 PF04079 Segregation and condensation complex subunit ScpB BD64_14 PF02590 Predicted SPOUT methyltransferase BD64_140 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BD64_1401 PF01979 Amidohydrolase family BD64_1402 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BD64_1405 PF03123 CAT RNA binding domain BD64_1405 PF00874 PRD domain BD64_1406 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BD64_1406 PF00367 phosphotransferase system, EIIB BD64_1406 PF02378 Phosphotransferase system, EIIC BD64_1407 PF00381 PTS HPr component phosphorylation site BD64_1408 PF02896 PEP-utilising enzyme, TIM barrel domain BD64_1408 PF05524 PEP-utilising enzyme, N-terminal BD64_1408 PF00391 PEP-utilising enzyme, mobile domain BD64_141 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BD64_1411 PF00881 Nitroreductase family BD64_1412 PF00990 Diguanylate cyclase, GGDEF domain BD64_1413 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BD64_1413 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BD64_1414 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BD64_1414 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BD64_1417 PF03079 ARD/ARD' family BD64_1418 PF00596 Class II Aldolase and Adducin N-terminal domain BD64_142 PF07498 Rho termination factor, N-terminal domain BD64_142 PF07497 Rho termination factor, RNA-binding domain BD64_142 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BD64_1420 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain BD64_1420 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain BD64_1421 PF00155 Aminotransferase class I and II BD64_1422 PF00795 Carbon-nitrogen hydrolase BD64_1423 PF01636 Phosphotransferase enzyme family BD64_1427 PF03551 Transcriptional regulator PadR-like family BD64_143 PF01197 Ribosomal protein L31 BD64_1433 PF00293 NUDIX domain BD64_1434 PF02803 Thiolase, C-terminal domain BD64_1434 PF00108 Thiolase, N-terminal domain BD64_144 PF00265 Thymidine kinase BD64_1442 PF00005 ABC transporter BD64_1442 PF03459 TOBE domain BD64_1442 PF17912 MalK OB fold domain BD64_1443 PF00128 Alpha amylase, catalytic domain BD64_1443 PF16657 Maltogenic Amylase, C-terminal domain BD64_1444 PF16657 Maltogenic Amylase, C-terminal domain BD64_1444 PF00128 Alpha amylase, catalytic domain BD64_1444 PF02903 Alpha amylase, N-terminal ig-like domain BD64_1445 PF13416 Bacterial extracellular solute-binding protein BD64_1446 PF00528 Binding-protein-dependent transport system inner membrane component BD64_1447 PF00528 Binding-protein-dependent transport system inner membrane component BD64_1448 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BD64_1448 PF00356 Bacterial regulatory proteins, lacI family BD64_1449 PF00155 Aminotransferase class I and II BD64_145 PF00472 RF-1 domain BD64_145 PF03462 PCRF domain BD64_1451 PF00512 His Kinase A (phospho-acceptor) domain BD64_1451 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_1453 PF14040 Deoxyribonuclease NucA/NucB BD64_1455 PF01717 Cobalamin-independent synthase, Catalytic domain BD64_1455 PF08267 Cobalamin-independent synthase, N-terminal domain BD64_1457 PF07690 Major Facilitator Superfamily BD64_146 PF13847 Methyltransferase domain BD64_146 PF17827 PrmC N-terminal domain BD64_1462 PF14177 YkyB-like protein BD64_1463 PF02541 Ppx/GppA phosphatase family BD64_1464 PF17941 Polyphosphate kinase C-terminal domain 1 BD64_1464 PF02503 Polyphosphate kinase middle domain BD64_1464 PF13089 Polyphosphate kinase N-terminal domain BD64_1464 PF13090 Polyphosphate kinase C-terminal domain 2 BD64_1466 PF00149 Calcineurin-like phosphoesterase BD64_1466 PF10518 TAT (twin-arginine translocation) pathway signal sequence BD64_1468 PF00563 EAL domain BD64_1468 PF10388 EAL-domain associated signalling protein domain BD64_147 PF09551 Stage II sporulation protein R (spore_II_R) BD64_1471 PF08796 Protein of unknown function (DUF1797) BD64_1473 PF04308 Ribonuclease H-like BD64_1476 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BD64_1476 PF03466 LysR substrate binding domain BD64_1477 PF00132 Bacterial transferase hexapeptide (six repeats) BD64_1477 PF14602 Hexapeptide repeat of succinyl-transferase BD64_1477 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal BD64_1478 PF01546 Peptidase family M20/M25/M40 BD64_1478 PF07687 Peptidase dimerisation domain BD64_1480 PF02080 TrkA-C domain BD64_1480 PF02254 TrkA-N domain BD64_1481 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BD64_1481 PF17770 Ribonuclease J C-terminal domain BD64_1481 PF00753 Metallo-beta-lactamase superfamily BD64_1484 PF01327 Polypeptide deformylase BD64_1486 PF00676 Dehydrogenase E1 component BD64_1487 PF02780 Transketolase, C-terminal domain BD64_1487 PF02779 Transketolase, pyrimidine binding domain BD64_1488 PF02817 e3 binding domain BD64_1488 PF00364 Biotin-requiring enzyme BD64_1488 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BD64_1489 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BD64_1489 PF07992 Pyridine nucleotide-disulphide oxidoreductase BD64_149 PF01300 Telomere recombination BD64_149 PF03481 Putative GTP-binding controlling metal-binding BD64_1497 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BD64_1497 PF01276 Orn/Lys/Arg decarboxylase, major domain BD64_1498 PF05256 Uncharacterised protein family (UPF0223) BD64_1499 PF06335 Protein of unknown function (DUF1054) BD64_150 PF02659 Putative manganese efflux pump BD64_1501 PF00459 Inositol monophosphatase family BD64_1504 PF14036 YlaH-like protein BD64_1506 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) BD64_1508 PF02562 PhoH-like protein BD64_1508 PF13638 PIN domain BD64_1510 PF07408 Protein of unknown function (DUF1507) BD64_1511 PF01098 Cell cycle protein BD64_1512 PF02436 Conserved carboxylase domain BD64_1512 PF02785 Biotin carboxylase C-terminal domain BD64_1512 PF00364 Biotin-requiring enzyme BD64_1512 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BD64_1512 PF00682 HMGL-like BD64_1512 PF00289 Biotin carboxylase, N-terminal domain BD64_1513 PF02628 Cytochrome oxidase assembly protein BD64_1514 PF01040 UbiA prenyltransferase family BD64_1515 PF00034 Cytochrome c BD64_1515 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BD64_1515 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BD64_1516 PF00115 Cytochrome C and Quinol oxidase polypeptide I BD64_1517 PF00510 Cytochrome c oxidase subunit III BD64_1518 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BD64_1519 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) BD64_152 PF01613 Flavin reductase like domain BD64_1520 PF00795 Carbon-nitrogen hydrolase BD64_1521 PF08868 YugN-like family BD64_1522 PF14504 CAP-associated N-terminal BD64_1522 PF00188 Cysteine-rich secretory protein family BD64_1523 PF14071 Putative coat protein BD64_1524 PF14003 YlbE-like protein BD64_1525 PF00300 Histidine phosphatase superfamily (branch 1) BD64_1526 PF06133 Control of competence regulator ComK, YlbF/YmcA BD64_1527 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) BD64_153 PF07681 DoxX BD64_1531 PF07670 Nucleoside recognition BD64_1532 PF01467 Cytidylyltransferase-like BD64_1533 PF01734 Patatin-like phospholipase BD64_1534 PF05362 Lon protease (S16) C-terminal proteolytic domain BD64_1534 PF13180 PDZ domain BD64_1535 PF05636 HIGH Nucleotidyl Transferase BD64_1536 PF00589 Phage integrase family BD64_1536 PF14659 Phage integrase, N-terminal SAM-like domain BD64_154 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BD64_1540 PF01381 Helix-turn-helix BD64_1544 PF01381 Helix-turn-helix BD64_155 PF01451 Low molecular weight phosphotyrosine protein phosphatase BD64_1550 PF01695 IstB-like ATP binding protein BD64_1550 PF07319 Primosomal protein DnaI N-terminus BD64_1555 PF04539 Sigma-70 region 3 BD64_1555 PF04542 Sigma-70 region 2 BD64_1555 PF04545 Sigma-70, region 4 BD64_156 PF02502 Ribose/Galactose Isomerase BD64_1560 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BD64_157 PF04260 Protein of unknown function (DUF436) BD64_1570 PF00589 Phage integrase family BD64_1571 PF10137 Predicted nucleotide-binding protein containing TIR-like domain BD64_1575 PF03354 Phage Terminase BD64_1577 PF00574 Clp protease BD64_158 PF00464 Serine hydroxymethyltransferase BD64_1594 PF05105 Bacteriophage holin family BD64_1595 PF12123 N-acetylmuramoyl-l-alanine amidase BD64_1595 PF01510 N-acetylmuramoyl-L-alanine amidase BD64_16 PF08439 Oligopeptidase F BD64_16 PF01432 Peptidase family M3 BD64_1604 PF02620 Large ribosomal RNA subunit accumulation protein YceD BD64_1605 PF01783 Ribosomal L32p protein family BD64_1607 PF00583 Acetyltransferase (GNAT) family BD64_1608 PF08546 Ketopantoate reductase PanE/ApbA C terminal BD64_1608 PF02558 Ketopantoate reductase PanE/ApbA BD64_1609 PF10079 Bacillithiol biosynthesis BshC BD64_161 PF03899 ATP synthase I chain BD64_1610 PF01795 MraW methylase family BD64_1611 PF04977 Septum formation initiator BD64_1613 PF03793 PASTA domain BD64_1613 PF03717 Penicillin-binding Protein dimerisation domain BD64_1613 PF00905 Penicillin binding protein transpeptidase domain BD64_1614 PF08245 Mur ligase middle domain BD64_1614 PF02875 Mur ligase family, glutamate ligase domain BD64_1614 PF01225 Mur ligase family, catalytic domain BD64_1615 PF00953 Glycosyl transferase family 4 BD64_1615 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BD64_1616 PF02875 Mur ligase family, glutamate ligase domain BD64_1616 PF08245 Mur ligase middle domain BD64_1617 PF01098 Cell cycle protein BD64_1618 PF04101 Glycosyltransferase family 28 C-terminal domain BD64_1618 PF03033 Glycosyltransferase family 28 N-terminal domain BD64_1619 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BD64_1619 PF01565 FAD binding domain BD64_162 PF00119 ATP synthase A chain BD64_1620 PF03799 Cell division protein FtsQ BD64_1620 PF08478 POTRA domain, FtsQ-type BD64_1621 PF02491 SHS2 domain inserted in FTSA BD64_1622 PF00091 Tubulin/FtsZ family, GTPase domain BD64_1622 PF12327 FtsZ family, C-terminal domain BD64_1623 PF03419 Sporulation factor SpoIIGA BD64_1624 PF04542 Sigma-70 region 2 BD64_1624 PF04545 Sigma-70, region 4 BD64_1625 PF04545 Sigma-70, region 4 BD64_1625 PF04539 Sigma-70 region 3 BD64_1625 PF04542 Sigma-70 region 2 BD64_1626 PF05239 PRC-barrel domain BD64_1628 PF01168 Alanine racemase, N-terminal domain BD64_1629 PF04472 Cell division protein SepF BD64_163 PF00137 ATP synthase subunit C BD64_1630 PF02325 YGGT family BD64_1631 PF01479 S4 domain BD64_1631 PF17774 Putative RNA-binding domain in YlmH BD64_1632 PF05103 DivIVA protein BD64_1633 PF08264 Anticodon-binding domain of tRNA BD64_1633 PF00133 tRNA synthetases class I (I, L, M and V) BD64_1633 PF06827 Zinc finger found in FPG and IleRS BD64_1635 PF01252 Signal peptidase (SPase) II BD64_1636 PF01479 S4 domain BD64_1636 PF00849 RNA pseudouridylate synthase BD64_1637 PF00156 Phosphoribosyl transferase domain BD64_1638 PF00860 Permease family BD64_1639 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BD64_1639 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BD64_164 PF00430 ATP synthase B/B' CF(0) BD64_1640 PF01979 Amidohydrolase family BD64_1641 PF00117 Glutamine amidotransferase class-I BD64_1641 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BD64_1642 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BD64_1642 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BD64_1642 PF02142 MGS-like domain BD64_1643 PF00175 Oxidoreductase NAD-binding domain BD64_1643 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B BD64_1644 PF01180 Dihydroorotate dehydrogenase BD64_1645 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BD64_1646 PF00156 Phosphoribosyl transferase domain BD64_165 PF00213 ATP synthase delta (OSCP) subunit BD64_1652 PF00557 Metallopeptidase family M24 BD64_1652 PF01321 Creatinase/Prolidase N-terminal domain BD64_1654 PF00689 Cation transporting ATPase, C-terminus BD64_1654 PF00690 Cation transporter/ATPase, N-terminus BD64_1655 PF03755 YicC-like family, N-terminal region BD64_1655 PF08340 Domain of unknown function (DUF1732) BD64_1656 PF04025 Domain of unknown function (DUF370) BD64_1657 PF00625 Guanylate kinase BD64_1658 PF01192 RNA polymerase Rpb6 BD64_1659 PF02441 Flavoprotein BD64_1659 PF04127 DNA / pantothenate metabolism flavoprotein BD64_166 PF00306 ATP synthase alpha/beta chain, C terminal domain BD64_166 PF02874 ATP synthase alpha/beta family, beta-barrel domain BD64_166 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BD64_1660 PF00271 Helicase conserved C-terminal domain BD64_1660 PF17764 3′ DNA-binding domain (3′BD) BD64_1660 PF18074 Primosomal protein N C-terminal domain BD64_1660 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BD64_1660 PF04851 Type III restriction enzyme, res subunit BD64_1661 PF01327 Polypeptide deformylase BD64_1662 PF02911 Formyl transferase, C-terminal domain BD64_1662 PF00551 Formyl transferase BD64_1663 PF01189 16S rRNA methyltransferase RsmB/F BD64_1663 PF01029 NusB family BD64_1664 PF04055 Radical SAM superfamily BD64_1666 PF00069 Protein kinase domain BD64_1666 PF03793 PASTA domain BD64_1667 PF03193 RsgA GTPase BD64_1667 PF16745 RsgA N-terminal domain BD64_1668 PF00834 Ribulose-phosphate 3 epimerase family BD64_1669 PF04263 Thiamin pyrophosphokinase, catalytic domain BD64_1669 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain BD64_167 PF00231 ATP synthase BD64_1670 PF00830 Ribosomal L28 family BD64_1671 PF03780 Asp23 family, cell envelope-related function BD64_1672 PF02734 DAK2 domain BD64_1672 PF13684 Dihydroxyacetone kinase family BD64_1673 PF00270 DEAD/DEAH box helicase BD64_1673 PF00271 Helicase conserved C-terminal domain BD64_1673 PF17191 RecG wedge domain BD64_1674 PF03061 Thioesterase superfamily BD64_1675 PF02504 Fatty acid synthesis protein BD64_1676 PF00698 Acyl transferase domain BD64_1678 PF00550 Phosphopantetheine attachment site BD64_1679 PF00035 Double-stranded RNA binding motif BD64_1679 PF14622 Ribonuclease-III-like BD64_168 PF02874 ATP synthase alpha/beta family, beta-barrel domain BD64_168 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BD64_1680 PF06470 SMC proteins Flexible Hinge Domain BD64_1680 PF02463 RecF/RecN/SMC N terminal domain BD64_1681 PF02881 SRP54-type protein, helical bundle domain BD64_1681 PF00448 SRP54-type protein, GTPase domain BD64_1682 PF04297 Putative helix-turn-helix protein, YlxM / p13 like BD64_1683 PF00448 SRP54-type protein, GTPase domain BD64_1683 PF02978 Signal peptide binding domain BD64_1683 PF02881 SRP54-type protein, helical bundle domain BD64_1684 PF00886 Ribosomal protein S16 BD64_1686 PF01782 RimM N-terminal domain BD64_1686 PF05239 PRC-barrel domain BD64_1687 PF01746 tRNA (Guanine-1)-methyltransferase BD64_1688 PF01245 Ribosomal protein L19 BD64_1689 PF10502 Signal peptidase, peptidase S26 BD64_169 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BD64_169 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BD64_1690 PF01926 50S ribosome-binding GTPase BD64_1691 PF01351 Ribonuclease HII BD64_1692 PF08442 ATP-grasp domain BD64_1692 PF00549 CoA-ligase BD64_1693 PF02629 CoA binding domain BD64_1693 PF00549 CoA-ligase BD64_1695 PF01131 DNA topoisomerase BD64_1695 PF01751 Toprim domain BD64_1695 PF01396 Topoisomerase DNA binding C4 zinc finger BD64_1696 PF01134 Glucose inhibited division protein A BD64_1697 PF02899 Phage integrase, N-terminal SAM-like domain BD64_1697 PF00589 Phage integrase family BD64_1698 PF00227 Proteasome subunit BD64_1699 PF07724 AAA domain (Cdc48 subfamily) BD64_1699 PF10431 C-terminal, D2-small domain, of ClpB protein BD64_1699 PF00004 ATPase family associated with various cellular activities (AAA) BD64_17 PF00478 IMP dehydrogenase / GMP reductase domain BD64_1700 PF08222 CodY helix-turn-helix domain BD64_1700 PF06018 CodY GAF-like domain BD64_1701 PF00318 Ribosomal protein S2 BD64_1702 PF00889 Elongation factor TS BD64_1703 PF00696 Amino acid kinase family BD64_1704 PF01765 Ribosome recycling factor BD64_1705 PF01255 Putative undecaprenyl diphosphate synthase BD64_1707 PF13288 DXP reductoisomerase C-terminal domain BD64_1707 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BD64_1707 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BD64_1708 PF17820 PDZ domain BD64_1708 PF02163 Peptidase family M50 BD64_1709 PF04073 Aminoacyl-tRNA editing domain BD64_1709 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BD64_1709 PF03129 Anticodon binding domain BD64_1710 PF14480 DNA polymerase III polC-type N-terminus I BD64_1710 PF11490 DNA polymerase III polC-type N-terminus II BD64_1710 PF07733 Bacterial DNA polymerase III alpha NTPase domain BD64_1710 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BD64_1710 PF00929 Exonuclease BD64_1710 PF14579 Helix-hairpin-helix motif BD64_1710 PF02811 PHP domain BD64_1711 PF02576 RimP N-terminal domain BD64_1711 PF17384 RimP C-terminal SH3 domain BD64_1712 PF08529 NusA N-terminal domain BD64_1712 PF00575 S1 RNA binding domain BD64_1712 PF13184 NusA-like KH domain BD64_1713 PF04296 Protein of unknown function (DUF448) BD64_1714 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BD64_1715 PF00009 Elongation factor Tu GTP binding domain BD64_1715 PF11987 Translation-initiation factor 2 BD64_1715 PF04760 Translation initiation factor IF-2, N-terminal region BD64_1716 PF04456 Protein of unknown function (DUF503) BD64_1717 PF02033 Ribosome-binding factor A BD64_1718 PF16198 tRNA pseudouridylate synthase B C-terminal domain BD64_1718 PF01509 TruB family pseudouridylate synthase (N terminal domain) BD64_1719 PF06574 FAD synthetase BD64_1719 PF01687 Riboflavin kinase BD64_172 PF00563 EAL domain BD64_172 PF00990 Diguanylate cyclase, GGDEF domain BD64_172 PF03707 Bacterial signalling protein N terminal repeat BD64_1720 PF00312 Ribosomal protein S15 BD64_1721 PF01138 3' exoribonuclease family, domain 1 BD64_1721 PF00575 S1 RNA binding domain BD64_1721 PF03725 3' exoribonuclease family, domain 2 BD64_1721 PF00013 KH domain BD64_1721 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BD64_1722 PF01522 Polysaccharide deacetylase BD64_1723 PF05193 Peptidase M16 inactive domain BD64_1723 PF00675 Insulinase (Peptidase family M16) BD64_1724 PF05239 PRC-barrel domain BD64_1725 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BD64_1725 PF16924 Dipicolinate synthase subunit A N-terminal domain BD64_1726 PF02441 Flavoprotein BD64_1727 PF02774 Semialdehyde dehydrogenase, dimerisation domain BD64_1727 PF01118 Semialdehyde dehydrogenase, NAD binding domain BD64_1728 PF13840 ACT domain BD64_1728 PF00696 Amino acid kinase family BD64_1729 PF00701 Dihydrodipicolinate synthetase family BD64_173 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BD64_1730 PF17770 Ribonuclease J C-terminal domain BD64_1730 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BD64_1730 PF00753 Metallo-beta-lactamase superfamily BD64_1731 PF00574 Clp protease BD64_1732 PF14035 YlzJ-like protein BD64_1733 PF01580 FtsK/SpoIIIE family BD64_1733 PF17854 FtsK alpha domain BD64_1733 PF09397 Ftsk gamma domain BD64_1734 PF07702 UTRA domain BD64_1734 PF00392 Bacterial regulatory proteins, gntR family BD64_174 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BD64_1740 PF05193 Peptidase M16 inactive domain BD64_1741 PF05193 Peptidase M16 inactive domain BD64_1741 PF00675 Insulinase (Peptidase family M16) BD64_1743 PF11588 Protein of unknown function (DUF3243) BD64_1744 PF11868 Protein of unknown function (DUF3388) BD64_1745 PF13464 Domain of unknown function (DUF4115) BD64_1746 PF01066 CDP-alcohol phosphatidyltransferase BD64_1747 PF00994 Probable molybdopterin binding domain BD64_1747 PF18146 Damage-inducible protein CinA KH domain BD64_1747 PF02464 Competence-damaged protein BD64_1748 PF00154 recA bacterial DNA recombination protein BD64_1749 PF00154 recA bacterial DNA recombination protein BD64_175 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BD64_1750 PF01966 HD domain BD64_1750 PF00013 KH domain BD64_1750 PF12072 Domain of unknown function (DUF3552) BD64_1751 PF13277 YmdB-like protein BD64_1752 PF04232 Stage V sporulation protein S (SpoVS) BD64_1753 PF01244 Membrane dipeptidase (Peptidase family M19) BD64_1754 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg BD64_1754 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase BD64_1754 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II BD64_1755 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BD64_1756 PF00919 Uncharacterized protein family UPF0004 BD64_1756 PF01938 TRAM domain BD64_1756 PF04055 Radical SAM superfamily BD64_1757 PF06133 Control of competence regulator ComK, YlbF/YmcA BD64_1758 PF10628 Outer spore coat protein E (CotE) BD64_1759 PF00488 MutS domain V BD64_1759 PF01624 MutS domain I BD64_1759 PF05188 MutS domain II BD64_1759 PF05192 MutS domain III BD64_1759 PF05190 MutS family domain IV BD64_176 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BD64_1760 PF08676 MutL C terminal dimerisation domain BD64_1760 PF01119 DNA mismatch repair protein, C-terminal domain BD64_1761 PF00005 ABC transporter BD64_1764 PF00486 Transcriptional regulatory protein, C terminal BD64_1764 PF00072 Response regulator receiver domain BD64_1765 PF00512 His Kinase A (phospho-acceptor) domain BD64_1765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_1766 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family BD64_1768 PF00350 Dynamin family BD64_1769 PF00884 Sulfatase BD64_177 PF00146 NADH dehydrogenase BD64_1770 PF03275 UDP-galactopyranose mutase BD64_1771 PF07486 Cell Wall Hydrolase BD64_1772 PF00082 Subtilase family BD64_1773 PF00388 Phosphatidylinositol-specific phospholipase C, X domain BD64_1775 PF02585 GlcNAc-PI de-N-acetylase BD64_1776 PF00561 alpha/beta hydrolase fold BD64_1776 PF00364 Biotin-requiring enzyme BD64_1777 PF00155 Aminotransferase class I and II BD64_1777 PF00392 Bacterial regulatory proteins, gntR family BD64_1778 PF03788 LrgA family BD64_1779 PF04172 LrgB-like family BD64_1780 PF10787 Uncharacterised protein from bacillus cereus group BD64_1782 PF03707 Bacterial signalling protein N terminal repeat BD64_1782 PF00990 Diguanylate cyclase, GGDEF domain BD64_1782 PF00563 EAL domain BD64_1783 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BD64_1784 PF00561 alpha/beta hydrolase fold BD64_1788 PF01546 Peptidase family M20/M25/M40 BD64_1788 PF07687 Peptidase dimerisation domain BD64_1789 PF00730 HhH-GPD superfamily base excision DNA repair protein BD64_1789 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain BD64_179 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BD64_1790 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BD64_1790 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BD64_1791 PF02805 Metal binding domain of Ada BD64_1791 PF12833 Helix-turn-helix domain BD64_1792 PF03372 Endonuclease/Exonuclease/phosphatase family BD64_1794 PF01497 Periplasmic binding protein BD64_1795 PF01032 FecCD transport family BD64_1796 PF01032 FecCD transport family BD64_1797 PF00005 ABC transporter BD64_1798 PF00756 Putative esterase BD64_180 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BD64_1800 PF02583 Metal-sensitive transcriptional repressor BD64_1801 PF00403 Heavy-metal-associated domain BD64_1802 PF00403 Heavy-metal-associated domain BD64_1803 PF00216 Bacterial DNA-binding protein BD64_1804 PF01226 Formate/nitrite transporter BD64_1805 PF00149 Calcineurin-like phosphoesterase BD64_1805 PF10518 TAT (twin-arginine translocation) pathway signal sequence BD64_1807 PF00704 Glycosyl hydrolases family 18 BD64_1807 PF00041 Fibronectin type III domain BD64_1808 PF00324 Amino acid permease BD64_181 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus BD64_181 PF00361 Proton-conducting membrane transporter BD64_181 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BD64_1811 PF04238 Protein of unknown function (DUF420) BD64_1812 PF00465 Iron-containing alcohol dehydrogenase BD64_1813 PF00465 Iron-containing alcohol dehydrogenase BD64_1814 PF08220 DeoR-like helix-turn-helix domain BD64_1814 PF00455 DeoR C terminal sensor domain BD64_1815 PF00294 pfkB family carbohydrate kinase BD64_1816 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BD64_1816 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BD64_1817 PF01476 LysM domain BD64_1817 PF06725 3D domain BD64_182 PF00361 Proton-conducting membrane transporter BD64_1820 PF17209 Hfq protein BD64_1824 PF17866 AAA lid domain BD64_1824 PF00004 ATPase family associated with various cellular activities (AAA) BD64_1825 PF03458 UPF0126 domain BD64_1826 PF01926 50S ribosome-binding GTPase BD64_1826 PF13167 GTP-binding GTPase N-terminal BD64_1826 PF16360 GTP-binding GTPase Middle Region BD64_1827 PF01926 50S ribosome-binding GTPase BD64_1827 PF16360 GTP-binding GTPase Middle Region BD64_1827 PF13167 GTP-binding GTPase N-terminal BD64_1828 PF06838 Methionine gamma-lyase BD64_1829 PF13411 MerR HTH family regulatory protein BD64_183 PF00361 Proton-conducting membrane transporter BD64_1830 PF00120 Glutamine synthetase, catalytic domain BD64_1830 PF03951 Glutamine synthetase, beta-Grasp domain BD64_1831 PF00589 Phage integrase family BD64_1831 PF02899 Phage integrase, N-terminal SAM-like domain BD64_1835 PF01381 Helix-turn-helix BD64_184 PF06612 Protein of unknown function (DUF1146) BD64_1850 PF00145 C-5 cytosine-specific DNA methylase BD64_1853 PF00145 C-5 cytosine-specific DNA methylase BD64_1854 PF02511 Thymidylate synthase complementing protein BD64_186 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BD64_1862 PF08281 Sigma-70, region 4 BD64_187 PF08486 Stage II sporulation protein BD64_188 PF00005 ABC transporter BD64_189 PF04397 LytTr DNA-binding domain BD64_189 PF00072 Response regulator receiver domain BD64_1895 PF05105 Bacteriophage holin family BD64_1896 PF01476 LysM domain BD64_1896 PF01471 Putative peptidoglycan binding domain BD64_1896 PF01510 N-acetylmuramoyl-L-alanine amidase BD64_19 PF03880 DbpA RNA binding domain BD64_19 PF00271 Helicase conserved C-terminal domain BD64_19 PF00270 DEAD/DEAH box helicase BD64_190 PF00005 ABC transporter BD64_1904 PF03551 Transcriptional regulator PadR-like family BD64_1907 PF01726 LexA DNA binding domain BD64_1907 PF00717 Peptidase S24-like BD64_1908 PF00239 Resolvase, N terminal domain BD64_1909 PF05979 Bacterial protein of unknown function (DUF896) BD64_1910 PF02872 5'-nucleotidase, C-terminal domain BD64_1910 PF00149 Calcineurin-like phosphoesterase BD64_1913 PF00005 ABC transporter BD64_1914 PF00528 Binding-protein-dependent transport system inner membrane component BD64_1915 PF00528 Binding-protein-dependent transport system inner membrane component BD64_1916 PF12323 Helix-turn-helix domain BD64_1916 PF01385 Probable transposase BD64_1916 PF07282 Putative transposase DNA-binding domain BD64_1917 PF00456 Transketolase, thiamine diphosphate binding domain BD64_1917 PF02779 Transketolase, pyrimidine binding domain BD64_1917 PF02780 Transketolase, C-terminal domain BD64_1918 PF10747 Sporulation inhibitor of replication protein SirA BD64_1919 PF03672 Uncharacterised protein family (UPF0154) BD64_192 PF01551 Peptidase family M23 BD64_1920 PF00664 ABC transporter transmembrane region BD64_1920 PF00005 ABC transporter BD64_1921 PF00664 ABC transporter transmembrane region BD64_1921 PF00005 ABC transporter BD64_1924 PF01471 Putative peptidoglycan binding domain BD64_1924 PF01510 N-acetylmuramoyl-L-alanine amidase BD64_1926 PF01925 Sulfite exporter TauE/SafE BD64_1928 PF00293 NUDIX domain BD64_1928 PF13344 Haloacid dehalogenase-like hydrolase BD64_1929 PF04172 LrgB-like family BD64_1930 PF03788 LrgA family BD64_1931 PF03466 LysR substrate binding domain BD64_1931 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BD64_1933 PF02683 Cytochrome C biogenesis protein transmembrane region BD64_1934 PF07301 Protein of unknown function (DUF1453) BD64_194 PF12116 Stage III sporulation protein D BD64_1940 PF11084 Protein of unknown function (DUF2621) BD64_1944 PF01209 ubiE/COQ5 methyltransferase family BD64_1945 PF09021 HutP BD64_1946 PF00221 Aromatic amino acid lyase BD64_1947 PF01175 Urocanase Rossmann-like domain BD64_1947 PF17392 Urocanase C-terminal domain BD64_1947 PF17391 Urocanase N-terminal domain BD64_1948 PF01979 Amidohydrolase family BD64_1949 PF00491 Arginase family BD64_1950 PF02559 CarD-like/TRCF domain BD64_1951 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BD64_1952 PF01645 Conserved region in glutamate synthase BD64_1953 PF00474 Sodium:solute symporter family BD64_1954 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BD64_1955 PF01738 Dienelactone hydrolase family BD64_1956 PF13426 PAS domain BD64_1956 PF00989 PAS fold BD64_1956 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_1956 PF13188 PAS domain BD64_1956 PF00512 His Kinase A (phospho-acceptor) domain BD64_1958 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BD64_1958 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BD64_1964 PF05532 CsbD-like BD64_1967 PF00501 AMP-binding enzyme BD64_1967 PF13193 AMP-binding enzyme C-terminal domain BD64_1968 PF02632 BioY family BD64_1969 PF13193 AMP-binding enzyme C-terminal domain BD64_1969 PF00501 AMP-binding enzyme BD64_1970 PF00108 Thiolase, N-terminal domain BD64_1970 PF02803 Thiolase, C-terminal domain BD64_1972 PF00293 NUDIX domain BD64_1972 PF13344 Haloacid dehalogenase-like hydrolase BD64_1973 PF02272 DHHA1 domain BD64_1973 PF01411 tRNA synthetases class II (A) BD64_1973 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BD64_1975 PF07690 Major Facilitator Superfamily BD64_1978 PF01522 Polysaccharide deacetylase BD64_1980 PF00694 Aconitase C-terminal domain BD64_1980 PF00330 Aconitase family (aconitate hydratase) BD64_1981 PF00664 ABC transporter transmembrane region BD64_1981 PF03412 Peptidase C39 family BD64_1981 PF00005 ABC transporter BD64_1983 PF00578 AhpC/TSA family BD64_1984 PF07733 Bacterial DNA polymerase III alpha NTPase domain BD64_1984 PF14579 Helix-hairpin-helix motif BD64_1984 PF11490 DNA polymerase III polC-type N-terminus II BD64_1984 PF02811 PHP domain BD64_1984 PF00929 Exonuclease BD64_1984 PF01336 OB-fold nucleic acid binding domain BD64_1984 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BD64_1985 PF13040 Fur-regulated basic protein B BD64_1986 PF08177 Small acid-soluble spore protein N family BD64_1988 PF01476 LysM domain BD64_1988 PF00704 Glycosyl hydrolases family 18 BD64_1989 PF03061 Thioesterase superfamily BD64_1990 PF01521 Iron-sulphur cluster biosynthesis BD64_1991 PF02660 Glycerol-3-phosphate acyltransferase BD64_1992 PF13597 Anaerobic ribonucleoside-triphosphate reductase BD64_1992 PF03477 ATP cone domain BD64_1993 PF04055 Radical SAM superfamily BD64_1994 PF00072 Response regulator receiver domain BD64_1994 PF00486 Transcriptional regulatory protein, C terminal BD64_1995 PF13180 PDZ domain BD64_1996 PF13380 CoA binding domain BD64_1997 PF00204 DNA gyrase B BD64_1997 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_1997 PF01751 Toprim domain BD64_1997 PF00986 DNA gyrase B subunit, carboxyl terminus BD64_1998 PF00521 DNA gyrase/topoisomerase IV, subunit A BD64_1998 PF03989 DNA gyrase C-terminal domain, beta-propeller BD64_1999 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BD64_1999 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BD64_2 PF00709 Adenylosuccinate synthetase BD64_2001 PF13732 Domain of unknown function (DUF4162) BD64_2001 PF00005 ABC transporter BD64_2005 PF08281 Sigma-70, region 4 BD64_2005 PF04542 Sigma-70 region 2 BD64_2007 PF03816 Cell envelope-related transcriptional attenuator domain BD64_2008 PF00375 Sodium:dicarboxylate symporter family BD64_2009 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BD64_2010 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BD64_2011 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BD64_2012 PF08241 Methyltransferase domain BD64_202 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BD64_202 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BD64_202 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BD64_2020 PF03323 Bacillus/Clostridium GerA spore germination protein BD64_2022 PF00037 4Fe-4S binding domain BD64_2022 PF01568 Molydopterin dinucleotide binding domain BD64_2022 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BD64_2022 PF00384 Molybdopterin oxidoreductase BD64_2022 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BD64_2023 PF00037 4Fe-4S binding domain BD64_2023 PF01568 Molydopterin dinucleotide binding domain BD64_2023 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BD64_2023 PF00384 Molybdopterin oxidoreductase BD64_2023 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BD64_2024 PF07849 Protein of unknown function (DUF1641) BD64_2025 PF10057 Uncharacterized conserved protein (DUF2294) BD64_2026 PF02634 FdhD/NarQ family BD64_2027 PF06463 Molybdenum Cofactor Synthesis C BD64_2027 PF04055 Radical SAM superfamily BD64_2028 PF01226 Formate/nitrite transporter BD64_2029 PF00899 ThiF family BD64_203 PF01061 ABC-2 type transporter BD64_2030 PF03453 MoeA N-terminal region (domain I and II) BD64_2030 PF03454 MoeA C-terminal region (domain IV) BD64_2030 PF00994 Probable molybdopterin binding domain BD64_2031 PF02391 MoaE protein BD64_2033 PF10609 NUBPL iron-transfer P-loop NTPase BD64_2036 PF06961 Protein of unknown function (DUF1294) BD64_2037 PF00892 EamA-like transporter family BD64_2038 PF02681 Divergent PAP2 family BD64_2039 PF13243 Squalene-hopene cyclase C-terminal domain BD64_2039 PF13249 Squalene-hopene cyclase N-terminal domain BD64_204 PF08239 Bacterial SH3 domain BD64_204 PF00005 ABC transporter BD64_2040 PF14151 YfhD-like protein BD64_2042 PF00171 Aldehyde dehydrogenase family BD64_2044 PF00474 Sodium:solute symporter family BD64_2045 PF01156 Inosine-uridine preferring nucleoside hydrolase BD64_2047 PF14698 Argininosuccinate lyase C-terminal BD64_2047 PF00206 Lyase BD64_2049 PF00106 short chain dehydrogenase BD64_205 PF02350 UDP-N-acetylglucosamine 2-epimerase BD64_2051 PF00132 Bacterial transferase hexapeptide (six repeats) BD64_2053 PF00293 NUDIX domain BD64_2055 PF00258 Flavodoxin BD64_2057 PF00313 'Cold-shock' DNA-binding domain BD64_206 PF07977 FabA-like domain BD64_2061 PF13037 Domain of unknown function (DUF3898) BD64_2061 PF13039 Protein of unknown function (DUF3900) BD64_2063 PF04294 VanW like protein BD64_2064 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BD64_2066 PF02308 MgtC family BD64_2067 PF18496 Collagenase G catalytic helper subdomain BD64_2067 PF01752 Collagenase BD64_2067 PF08453 Peptidase family M9 N-terminal BD64_2068 PF00378 Enoyl-CoA hydratase/isomerase BD64_2069 PF00535 Glycosyl transferase family 2 BD64_207 PF03816 Cell envelope-related transcriptional attenuator domain BD64_2070 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BD64_2071 PF00132 Bacterial transferase hexapeptide (six repeats) BD64_2075 PF02913 FAD linked oxidases, C-terminal domain BD64_2075 PF01565 FAD binding domain BD64_2076 PF01758 Sodium Bile acid symporter family BD64_2078 PF04229 GrpB protein BD64_2079 PF04299 Putative FMN-binding domain BD64_208 PF16363 GDP-mannose 4,6 dehydratase BD64_2082 PF18801 response regulator aspartate phosphatase H, N terminal BD64_2083 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BD64_2084 PF00107 Zinc-binding dehydrogenase BD64_2084 PF08240 Alcohol dehydrogenase GroES-like domain BD64_2085 PF01022 Bacterial regulatory protein, arsR family BD64_2086 PF01494 FAD binding domain BD64_2089 PF03009 Glycerophosphoryl diester phosphodiesterase family BD64_209 PF00072 Response regulator receiver domain BD64_209 PF00486 Transcriptional regulatory protein, C terminal BD64_2092 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BD64_2092 PF03466 LysR substrate binding domain BD64_2093 PF07690 Major Facilitator Superfamily BD64_2095 PF00144 Beta-lactamase BD64_2098 PF00797 N-acetyltransferase BD64_2099 PF00128 Alpha amylase, catalytic domain BD64_2099 PF09154 Domain of unknown function (DUF1939) BD64_21 PF03006 Haemolysin-III related BD64_210 PF16736 Single Cache-like BD64_210 PF00989 PAS fold BD64_210 PF00512 His Kinase A (phospho-acceptor) domain BD64_210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_2101 PF01713 Smr domain BD64_2101 PF00488 MutS domain V BD64_2104 PF00107 Zinc-binding dehydrogenase BD64_2104 PF08240 Alcohol dehydrogenase GroES-like domain BD64_2105 PF03466 LysR substrate binding domain BD64_2105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BD64_2107 PF10901 Protein of unknown function (DUF2690) BD64_2110 PF13170 Protein of unknown function (DUF4003) BD64_2111 PF02567 Phenazine biosynthesis-like protein BD64_2112 PF05675 Protein of unknown function (DUF817) BD64_2113 PF01032 FecCD transport family BD64_2114 PF01032 FecCD transport family BD64_2116 PF01497 Periplasmic binding protein BD64_2120 PF03600 Citrate transporter BD64_2121 PF08830 Protein of unknown function (DUF1806) BD64_2122 PF02585 GlcNAc-PI de-N-acetylase BD64_2127 PF07690 Major Facilitator Superfamily BD64_2128 PF00324 Amino acid permease BD64_2129 PF08240 Alcohol dehydrogenase GroES-like domain BD64_2129 PF00107 Zinc-binding dehydrogenase BD64_213 PF07690 Major Facilitator Superfamily BD64_2130 PF00753 Metallo-beta-lactamase superfamily BD64_2138 PF00144 Beta-lactamase BD64_2143 PF01183 Glycosyl hydrolases family 25 BD64_2143 PF01471 Putative peptidoglycan binding domain BD64_2144 PF00753 Metallo-beta-lactamase superfamily BD64_2147 PF03063 Prismane/CO dehydrogenase family BD64_2150 PF13732 Domain of unknown function (DUF4162) BD64_2150 PF00005 ABC transporter BD64_2151 PF01061 ABC-2 type transporter BD64_2152 PF05656 Protein of unknown function (DUF805) BD64_2156 PF00440 Bacterial regulatory proteins, tetR family BD64_2158 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 BD64_2158 PF00535 Glycosyl transferase family 2 BD64_2159 PF04542 Sigma-70 region 2 BD64_2160 PF12791 Anti-sigma factor N-terminus BD64_2162 PF01522 Polysaccharide deacetylase BD64_2162 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain BD64_2163 PF01022 Bacterial regulatory protein, arsR family BD64_2166 PF01638 HxlR-like helix-turn-helix BD64_2167 PF02525 Flavodoxin-like fold BD64_2169 PF13193 AMP-binding enzyme C-terminal domain BD64_2169 PF00501 AMP-binding enzyme BD64_217 PF00005 ABC transporter BD64_2173 PF02567 Phenazine biosynthesis-like protein BD64_2179 PF00248 Aldo/keto reductase family BD64_218 PF02687 FtsX-like permease family BD64_218 PF12704 MacB-like periplasmic core domain BD64_2180 PF01638 HxlR-like helix-turn-helix BD64_2181 PF01638 HxlR-like helix-turn-helix BD64_2184 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BD64_2184 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BD64_2185 PF00392 Bacterial regulatory proteins, gntR family BD64_2185 PF07702 UTRA domain BD64_2186 PF01638 HxlR-like helix-turn-helix BD64_2187 PF03960 ArsC family BD64_219 PF04893 Yip1 domain BD64_2193 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BD64_2194 PF03928 Haem-degrading BD64_2196 PF07690 Major Facilitator Superfamily BD64_2197 PF00248 Aldo/keto reductase family BD64_22 PF16363 GDP-mannose 4,6 dehydratase BD64_220 PF04542 Sigma-70 region 2 BD64_220 PF04545 Sigma-70, region 4 BD64_2201 PF03413 Peptidase propeptide and YPEB domain BD64_2201 PF01447 Thermolysin metallopeptidase, catalytic domain BD64_2201 PF02868 Thermolysin metallopeptidase, alpha-helical domain BD64_2201 PF07504 Fungalysin/Thermolysin Propeptide Motif BD64_2202 PF00106 short chain dehydrogenase BD64_2203 PF08240 Alcohol dehydrogenase GroES-like domain BD64_2203 PF02801 Beta-ketoacyl synthase, C-terminal domain BD64_2203 PF08659 KR domain BD64_2203 PF00550 Phosphopantetheine attachment site BD64_2203 PF14765 Polyketide synthase dehydratase BD64_2203 PF00698 Acyl transferase domain BD64_2203 PF00107 Zinc-binding dehydrogenase BD64_2203 PF00109 Beta-ketoacyl synthase, N-terminal domain BD64_2203 PF16197 Ketoacyl-synthetase C-terminal extension BD64_2205 PF00296 Luciferase-like monooxygenase BD64_2206 PF08240 Alcohol dehydrogenase GroES-like domain BD64_2206 PF00107 Zinc-binding dehydrogenase BD64_2207 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BD64_2207 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BD64_2208 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BD64_2208 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BD64_2209 PF00456 Transketolase, thiamine diphosphate binding domain BD64_2209 PF02779 Transketolase, pyrimidine binding domain BD64_2209 PF02780 Transketolase, C-terminal domain BD64_2210 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BD64_2210 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BD64_2211 PF00923 Transaldolase/Fructose-6-phosphate aldolase BD64_2212 PF02447 GntP family permease BD64_2213 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BD64_2213 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BD64_2214 PF10282 Lactonase, 7-bladed beta-propeller BD64_2215 PF06906 Protein of unknown function (DUF1272) BD64_2216 PF00805 Pentapeptide repeats (8 copies) BD64_2217 PF00892 EamA-like transporter family BD64_2218 PF13411 MerR HTH family regulatory protein BD64_2219 PF00571 CBS domain BD64_2219 PF01595 Cyclin M transmembrane N-terminal domain BD64_2219 PF03471 Transporter associated domain BD64_2221 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BD64_2225 PF07690 Major Facilitator Superfamily BD64_2227 PF08241 Methyltransferase domain BD64_2231 PF01594 AI-2E family transporter BD64_2232 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BD64_2232 PF13288 DXP reductoisomerase C-terminal domain BD64_2232 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BD64_2233 PF00579 tRNA synthetases class I (W and Y) BD64_2235 PF00005 ABC transporter BD64_2237 PF14602 Hexapeptide repeat of succinyl-transferase BD64_2237 PF12464 Maltose acetyltransferase BD64_2238 PF07690 Major Facilitator Superfamily BD64_2239 PF00480 ROK family BD64_2240 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BD64_2242 PF00293 NUDIX domain BD64_2242 PF13344 Haloacid dehalogenase-like hydrolase BD64_2247 PF13419 Haloacid dehalogenase-like hydrolase BD64_2252 PF00005 ABC transporter BD64_2256 PF02887 Pyruvate kinase, alpha/beta domain BD64_2256 PF00224 Pyruvate kinase, barrel domain BD64_2256 PF00391 PEP-utilising enzyme, mobile domain BD64_2258 PF00881 Nitroreductase family BD64_2259 PF01638 HxlR-like helix-turn-helix BD64_226 PF12419 SNF2 Helicase protein BD64_226 PF00176 SNF2 family N-terminal domain BD64_226 PF00271 Helicase conserved C-terminal domain BD64_2262 PF13393 Histidyl-tRNA synthetase BD64_2262 PF03129 Anticodon binding domain BD64_2263 PF04073 Aminoacyl-tRNA editing domain BD64_2264 PF02660 Glycerol-3-phosphate acyltransferase BD64_2265 PF01381 Helix-turn-helix BD64_2268 PF04231 Endonuclease I BD64_2269 PF03606 C4-dicarboxylate anaerobic carrier BD64_227 PF04434 SWIM zinc finger BD64_2270 PF03737 Aldolase/RraA BD64_2273 PF02361 Cobalt transport protein BD64_2274 PF00005 ABC transporter BD64_2276 PF14256 YwiC-like protein BD64_2280 PF02525 Flavodoxin-like fold BD64_2282 PF02667 Short chain fatty acid transporter BD64_2283 PF17440 Thiol-activated cytolysin beta sandwich domain BD64_2283 PF01289 Thiol-activated cytolysin BD64_2284 PF00440 Bacterial regulatory proteins, tetR family BD64_2285 PF00893 Small Multidrug Resistance protein BD64_2286 PF17314 Family of unknown function (DUF5360) BD64_2288 PF13396 Phospholipase_D-nuclease N-terminal BD64_2289 PF00005 ABC transporter BD64_2289 PF13732 Domain of unknown function (DUF4162) BD64_2290 PF12679 ABC-2 family transporter protein BD64_2293 PF07690 Major Facilitator Superfamily BD64_2294 PF01047 MarR family BD64_2295 PF12697 Alpha/beta hydrolase family BD64_2296 PF07690 Major Facilitator Superfamily BD64_2297 PF14044 NETI protein BD64_2304 PF00395 S-layer homology domain BD64_2306 PF01804 Penicillin amidase BD64_2307 PF01497 Periplasmic binding protein BD64_2307 PF12833 Helix-turn-helix domain BD64_2308 PF07883 Cupin domain BD64_2311 PF04542 Sigma-70 region 2 BD64_2311 PF08281 Sigma-70, region 4 BD64_2314 PF00266 Aminotransferase class-V BD64_2315 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BD64_2315 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BD64_2315 PF01842 ACT domain BD64_2318 PF13520 Amino acid permease BD64_2319 PF01037 Lrp/AsnC ligand binding domain BD64_232 PF01476 LysM domain BD64_232 PF06725 3D domain BD64_2320 PF00857 Isochorismatase family BD64_2321 PF02769 AIR synthase related protein, C-terminal domain BD64_2321 PF00586 AIR synthase related protein, N-terminal domain BD64_2322 PF01300 Telomere recombination BD64_2322 PF07503 HypF finger BD64_2322 PF00708 Acylphosphatase BD64_2322 PF17788 HypF Kae1-like domain BD64_2323 PF00202 Aminotransferase class-III BD64_2324 PF03315 Serine dehydratase beta chain BD64_2324 PF01842 ACT domain BD64_2325 PF03313 Serine dehydratase alpha chain BD64_2327 PF01022 Bacterial regulatory protein, arsR family BD64_2329 PF00440 Bacterial regulatory proteins, tetR family BD64_2329 PF16859 Tetracyclin repressor-like, C-terminal domain BD64_233 PF02028 BCCT, betaine/carnitine/choline family transporter BD64_2330 PF07690 Major Facilitator Superfamily BD64_2331 PF02661 Fic/DOC family BD64_2332 PF01609 Transposase DDE domain BD64_2333 PF18496 Collagenase G catalytic helper subdomain BD64_2333 PF01752 Collagenase BD64_2333 PF08453 Peptidase family M9 N-terminal BD64_2334 PF01554 MatE BD64_2338 PF00672 HAMP domain BD64_2338 PF02743 Cache domain BD64_2338 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD64_2341 PF00817 impB/mucB/samB family BD64_2341 PF11799 impB/mucB/samB family C-terminal domain BD64_2341 PF11798 IMS family HHH motif BD64_2345 PF18801 response regulator aspartate phosphatase H, N terminal BD64_2346 PF00356 Bacterial regulatory proteins, lacI family BD64_2347 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BD64_2348 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BD64_2349 PF05116 Sucrose-6F-phosphate phosphohydrolase BD64_2350 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BD64_2350 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BD64_2351 PF07690 Major Facilitator Superfamily BD64_2355 PF17676 LD-carboxypeptidase C-terminal domain BD64_2355 PF02016 LD-carboxypeptidase N-terminal domain BD64_2357 PF03466 LysR substrate binding domain BD64_2357 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BD64_2358 PF02754 Cysteine-rich domain BD64_2359 PF11870 Domain of unknown function (DUF3390) BD64_2359 PF02589 LUD domain BD64_2359 PF13183 4Fe-4S dicluster domain BD64_2360 PF02589 LUD domain BD64_2361 PF07690 Major Facilitator Superfamily BD64_2362 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BD64_2362 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BD64_2363 PF04299 Putative FMN-binding domain BD64_2364 PF00583 Acetyltransferase (GNAT) family BD64_2365 PF01047 MarR family BD64_2367 PF00486 Transcriptional regulatory protein, C terminal BD64_2367 PF00072 Response regulator receiver domain BD64_2368 PF00512 His Kinase A (phospho-acceptor) domain BD64_2368 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_2368 PF00672 HAMP domain BD64_237 PF07662 Na+ dependent nucleoside transporter C-terminus BD64_237 PF01773 Na+ dependent nucleoside transporter N-terminus BD64_2371 PF02687 FtsX-like permease family BD64_2372 PF00005 ABC transporter BD64_2375 PF04072 Leucine carboxyl methyltransferase BD64_2376 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BD64_2376 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BD64_2378 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family BD64_2379 PF00753 Metallo-beta-lactamase superfamily BD64_238 PF01476 LysM domain BD64_238 PF00877 NlpC/P60 family BD64_2382 PF01381 Helix-turn-helix BD64_2384 PF00144 Beta-lactamase BD64_2388 PF00291 Pyridoxal-phosphate dependent enzyme BD64_2393 PF00512 His Kinase A (phospho-acceptor) domain BD64_2393 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_2393 PF00672 HAMP domain BD64_2394 PF00486 Transcriptional regulatory protein, C terminal BD64_2394 PF00072 Response regulator receiver domain BD64_2399 PF07690 Major Facilitator Superfamily BD64_24 PF02293 AmiS/UreI family transporter BD64_240 PF01063 Amino-transferase class IV BD64_2400 PF00067 Cytochrome P450 BD64_2400 PF00258 Flavodoxin BD64_2400 PF00667 FAD binding domain BD64_2400 PF00175 Oxidoreductase NAD-binding domain BD64_2401 PF12802 MarR family BD64_2404 PF00144 Beta-lactamase BD64_2409 PF01609 Transposase DDE domain BD64_241 PF00884 Sulfatase BD64_2411 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BD64_2414 PF01037 Lrp/AsnC ligand binding domain BD64_2417 PF00012 Hsp70 protein BD64_2421 PF01022 Bacterial regulatory protein, arsR family BD64_2422 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BD64_2423 PF01758 Sodium Bile acid symporter family BD64_2424 PF01451 Low molecular weight phosphotyrosine protein phosphatase BD64_2429 PF00005 ABC transporter BD64_2430 PF00950 ABC 3 transport family BD64_2431 PF01297 Zinc-uptake complex component A periplasmic BD64_2432 PF00561 alpha/beta hydrolase fold BD64_2433 PF01040 UbiA prenyltransferase family BD64_2435 PF10057 Uncharacterized conserved protein (DUF2294) BD64_2436 PF00361 Proton-conducting membrane transporter BD64_2436 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BD64_2437 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) BD64_2439 PF00875 DNA photolyase BD64_2439 PF03441 FAD binding domain of DNA photolyase BD64_244 PF09988 Uncharacterized metal-binding protein (DUF2227) BD64_2440 PF03073 TspO/MBR family BD64_2443 PF11181 Heat induced stress protein YflT BD64_2446 PF01544 CorA-like Mg2+ transporter protein BD64_2447 PF01544 CorA-like Mg2+ transporter protein BD64_2448 PF01047 MarR family BD64_2449 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BD64_2449 PF03466 LysR substrate binding domain BD64_2451 PF01979 Amidohydrolase family BD64_2454 PF00857 Isochorismatase family BD64_2455 PF00561 alpha/beta hydrolase fold BD64_2456 PF06628 Catalase-related immune-responsive BD64_2456 PF00199 Catalase BD64_2457 PF02872 5'-nucleotidase, C-terminal domain BD64_2457 PF17936 Bacterial Ig domain BD64_2457 PF00149 Calcineurin-like phosphoesterase BD64_246 PF02652 L-lactate permease BD64_2463 PF01235 Sodium:alanine symporter family BD64_2465 PF04960 Glutaminase BD64_2466 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_2467 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_2468 PF08664 YcbB domain BD64_2468 PF00072 Response regulator receiver domain BD64_2469 PF03323 Bacillus/Clostridium GerA spore germination protein BD64_247 PF01964 Radical SAM ThiC family BD64_247 PF13667 ThiC-associated domain BD64_2470 PF03845 Spore germination protein BD64_2471 PF05504 Spore germination B3/ GerAC like, C-terminal BD64_2472 PF05504 Spore germination B3/ GerAC like, C-terminal BD64_2474 PF00390 Malic enzyme, N-terminal domain BD64_2474 PF03949 Malic enzyme, NAD binding domain BD64_2475 PF13564 DoxX-like family BD64_2476 PF14748 Pyrroline-5-carboxylate reductase dimerisation BD64_2476 PF03807 NADP oxidoreductase coenzyme F420-dependent BD64_2477 PF05525 Branched-chain amino acid transport protein BD64_2478 PF13520 Amino acid permease BD64_2479 PF08459 UvrC Helix-hairpin-helix N-terminal BD64_2479 PF02151 UvrB/uvrC motif BD64_2479 PF01541 GIY-YIG catalytic domain BD64_2479 PF12826 Helix-hairpin-helix motif BD64_248 PF02040 Arsenical pump membrane protein BD64_2481 PF01381 Helix-turn-helix BD64_2482 PF17763 Glutaminase/Asparaginase C-terminal domain BD64_2482 PF00710 Asparaginase, N-terminal BD64_2483 PF00206 Lyase BD64_2483 PF10415 Fumarase C C-terminus BD64_2486 PF00107 Zinc-binding dehydrogenase BD64_2486 PF13823 Alcohol dehydrogenase GroES-associated BD64_2486 PF08240 Alcohol dehydrogenase GroES-like domain BD64_2487 PF00269 Small, acid-soluble spore proteins, alpha/beta type BD64_2488 PF11553 Protein of unknown function (DUF3231) BD64_2489 PF10710 Protein of unknown function (DUF2512) BD64_249 PF02322 Cytochrome bd terminal oxidase subunit II BD64_2490 PF00269 Small, acid-soluble spore proteins, alpha/beta type BD64_2492 PF00324 Amino acid permease BD64_2493 PF00324 Amino acid permease BD64_2494 PF01810 LysE type translocator BD64_2495 PF08892 YqcI/YcgG family BD64_2497 PF07875 Coat F domain BD64_250 PF01654 Cytochrome bd terminal oxidase subunit I BD64_2500 PF00753 Metallo-beta-lactamase superfamily BD64_2501 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BD64_2501 PF00391 PEP-utilising enzyme, mobile domain BD64_2502 PF00440 Bacterial regulatory proteins, tetR family BD64_2504 PF02915 Rubrerythrin BD64_2511 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BD64_2511 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BD64_2511 PF02770 Acyl-CoA dehydrogenase, middle domain BD64_2514 PF07454 Stage II sporulation protein P (SpoIIP) BD64_2515 PF03932 CutC family BD64_2516 PF10502 Signal peptidase, peptidase S26 BD64_2517 PF09339 IclR helix-turn-helix domain BD64_2517 PF01614 Bacterial transcriptional regulator BD64_2518 PF02682 Carboxyltransferase domain, subdomain C and D BD64_2519 PF02626 Carboxyltransferase domain, subdomain A and B BD64_2520 PF03746 LamB/YcsF family BD64_2524 PF01470 Pyroglutamyl peptidase BD64_2525 PF02146 Sir2 family BD64_2528 PF10502 Signal peptidase, peptidase S26 BD64_2530 PF00293 NUDIX domain BD64_2534 PF10898 Protein of unknown function (DUF2716) BD64_2535 PF08713 DNA alkylation repair enzyme BD64_2537 PF00324 Amino acid permease BD64_2538 PF13302 Acetyltransferase (GNAT) domain BD64_2539 PF01925 Sulfite exporter TauE/SafE BD64_254 PF03466 LysR substrate binding domain BD64_254 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BD64_2545 PF00561 alpha/beta hydrolase fold BD64_2546 PF00486 Transcriptional regulatory protein, C terminal BD64_2546 PF00072 Response regulator receiver domain BD64_2547 PF00672 HAMP domain BD64_2547 PF00512 His Kinase A (phospho-acceptor) domain BD64_2549 PF13031 Protein of unknown function (DUF3892) BD64_2550 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BD64_2551 PF00392 Bacterial regulatory proteins, gntR family BD64_2551 PF00155 Aminotransferase class I and II BD64_2552 PF00892 EamA-like transporter family BD64_2555 PF00583 Acetyltransferase (GNAT) family BD64_2556 PF12833 Helix-turn-helix domain BD64_256 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BD64_2561 PF12704 MacB-like periplasmic core domain BD64_2561 PF00005 ABC transporter BD64_2561 PF02687 FtsX-like permease family BD64_2563 PF00392 Bacterial regulatory proteins, gntR family BD64_2564 PF00005 ABC transporter BD64_2567 PF00293 NUDIX domain BD64_2569 PF14492 Elongation Factor G, domain II BD64_2569 PF00009 Elongation factor Tu GTP binding domain BD64_2569 PF00679 Elongation factor G C-terminus BD64_2569 PF03764 Elongation factor G, domain IV BD64_2570 PF01047 MarR family BD64_2571 PF00881 Nitroreductase family BD64_2573 PF17863 AAA lid domain BD64_2573 PF07726 ATPase family associated with various cellular activities (AAA) BD64_2578 PF00144 Beta-lactamase BD64_2579 PF13382 Adenine deaminase C-terminal domain BD64_2579 PF01979 Amidohydrolase family BD64_258 PF00375 Sodium:dicarboxylate symporter family BD64_2581 PF00199 Catalase BD64_2581 PF06628 Catalase-related immune-responsive BD64_2582 PF00202 Aminotransferase class-III BD64_2584 PF00535 Glycosyl transferase family 2 BD64_2586 PF00535 Glycosyl transferase family 2 BD64_2589 PF00535 Glycosyl transferase family 2 BD64_259 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BD64_2591 PF07690 Major Facilitator Superfamily BD64_2594 PF17863 AAA lid domain BD64_2594 PF07726 ATPase family associated with various cellular activities (AAA) BD64_2598 PF12681 Glyoxalase-like domain BD64_2599 PF13302 Acetyltransferase (GNAT) domain BD64_26 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BD64_26 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BD64_260 PF02378 Phosphotransferase system, EIIC BD64_2601 PF00072 Response regulator receiver domain BD64_2601 PF04397 LytTr DNA-binding domain BD64_2603 PF10086 YhfC intramembrane metalloprotease BD64_2606 PF13443 Cro/C1-type HTH DNA-binding domain BD64_2607 PF11188 Protein of unknown function (DUF2975) BD64_2608 PF00245 Alkaline phosphatase BD64_2609 PF00487 Fatty acid desaturase BD64_261 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BD64_2610 PF01139 tRNA-splicing ligase RtcB BD64_2611 PF00324 Amino acid permease BD64_2612 PF09339 IclR helix-turn-helix domain BD64_2612 PF01614 Bacterial transcriptional regulator BD64_2613 PF01546 Peptidase family M20/M25/M40 BD64_2614 PF03807 NADP oxidoreductase coenzyme F420-dependent BD64_2614 PF14748 Pyrroline-5-carboxylate reductase dimerisation BD64_2615 PF00696 Amino acid kinase family BD64_2615 PF01472 PUA domain BD64_2616 PF00171 Aldehyde dehydrogenase family BD64_2617 PF01773 Na+ dependent nucleoside transporter N-terminus BD64_2617 PF07662 Na+ dependent nucleoside transporter C-terminus BD64_262 PF02675 S-adenosylmethionine decarboxylase BD64_2621 PF03992 Antibiotic biosynthesis monooxygenase BD64_2625 PF01791 DeoC/LacD family aldolase BD64_2627 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BD64_2627 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BD64_2628 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BD64_2628 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BD64_2629 PF00325 Bacterial regulatory proteins, crp family BD64_2629 PF04198 Putative sugar-binding domain BD64_2630 PF00005 ABC transporter BD64_2631 PF02653 Branched-chain amino acid transport system / permease component BD64_2632 PF02653 Branched-chain amino acid transport system / permease component BD64_2633 PF13407 Periplasmic binding protein domain BD64_2634 PF06039 Malate:quinone oxidoreductase (Mqo) BD64_2639 PF08281 Sigma-70, region 4 BD64_2639 PF04542 Sigma-70 region 2 BD64_264 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BD64_2641 PF06725 3D domain BD64_2641 PF01476 LysM domain BD64_2644 PF01636 Phosphotransferase enzyme family BD64_2649 PF01817 Chorismate mutase type II BD64_2649 PF00793 DAHP synthetase I family BD64_265 PF02378 Phosphotransferase system, EIIC BD64_2650 PF01264 Chorismate synthase BD64_2651 PF00155 Aminotransferase class I and II BD64_2652 PF02153 Prephenate dehydrogenase BD64_2652 PF01842 ACT domain BD64_2653 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BD64_2655 PF16295 Tetracyclin repressor-like, C-terminal domain BD64_2655 PF00440 Bacterial regulatory proteins, tetR family BD64_2656 PF03176 MMPL family BD64_2657 PF03176 MMPL family BD64_2659 PF00005 ABC transporter BD64_2659 PF12848 ABC transporter BD64_266 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BD64_2660 PF00884 Sulfatase BD64_2661 PF03741 Integral membrane protein TerC family BD64_2663 PF01522 Polysaccharide deacetylase BD64_2665 PF08713 DNA alkylation repair enzyme BD64_2669 PF12867 DinB superfamily BD64_267 PF11975 Family 4 glycosyl hydrolase C-terminal domain BD64_267 PF02056 Family 4 glycosyl hydrolase BD64_2670 PF13536 Putative multidrug resistance efflux transporter BD64_2675 PF02522 Aminoglycoside 3-N-acetyltransferase BD64_268 PF04794 YdjC-like protein BD64_2683 PF00005 ABC transporter BD64_2684 PF09084 NMT1/THI5 like BD64_2685 PF00528 Binding-protein-dependent transport system inner membrane component BD64_2686 PF00296 Luciferase-like monooxygenase BD64_2688 PF01594 AI-2E family transporter BD64_269 PF02417 Chromate transporter BD64_2697 PF00005 ABC transporter BD64_27 PF02898 Nitric oxide synthase, oxygenase domain BD64_2701 PF03630 Fumble BD64_2702 PF07977 FabA-like domain BD64_2703 PF00155 Aminotransferase class I and II BD64_2709 PF08241 Methyltransferase domain BD64_271 PF00158 Sigma-54 interaction domain BD64_271 PF00874 PRD domain BD64_271 PF03610 PTS system fructose IIA component BD64_2711 PF01156 Inosine-uridine preferring nucleoside hydrolase BD64_2712 PF04226 Transglycosylase associated protein BD64_2716 PF07690 Major Facilitator Superfamily BD64_2717 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BD64_2717 PF12793 Sugar transport-related sRNA regulator N-term BD64_2718 PF13171 Protein of unknown function (DUF4004) BD64_2719 PF04519 Polymer-forming cytoskeletal BD64_2721 PF07690 Major Facilitator Superfamily BD64_2725 PF02645 Uncharacterised protein, DegV family COG1307 BD64_2728 PF01432 Peptidase family M3 BD64_2728 PF08439 Oligopeptidase F BD64_2729 PF03808 Glycosyl transferase WecB/TagA/CpsF family BD64_273 PF00953 Glycosyl transferase family 4 BD64_2731 PF01048 Phosphorylase superfamily BD64_2735 PF00072 Response regulator receiver domain BD64_2735 PF00486 Transcriptional regulatory protein, C terminal BD64_2736 PF00989 PAS fold BD64_2736 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_2736 PF00512 His Kinase A (phospho-acceptor) domain BD64_2736 PF16736 Single Cache-like BD64_2737 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BD64_2737 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BD64_274 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BD64_274 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BD64_274 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BD64_2742 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BD64_2744 PF13378 Enolase C-terminal domain-like BD64_2744 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BD64_2745 PF00877 NlpC/P60 family BD64_2745 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain BD64_2746 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BD64_2747 PF13673 Acetyltransferase (GNAT) domain BD64_2747 PF13302 Acetyltransferase (GNAT) domain BD64_2747 PF00117 Glutamine amidotransferase class-I BD64_2747 PF00958 GMP synthase C terminal domain BD64_2747 PF03352 Methyladenine glycosylase BD64_2748 PF04914 DltD protein BD64_275 PF02350 UDP-N-acetylglucosamine 2-epimerase BD64_2751 PF09335 SNARE associated Golgi protein BD64_2752 PF08876 Domain of unknown function (DUF1836) BD64_2755 PF07992 Pyridine nucleotide-disulphide oxidoreductase BD64_2755 PF04324 BFD-like [2Fe-2S] binding domain BD64_2757 PF02954 Bacterial regulatory protein, Fis family BD64_2757 PF00158 Sigma-54 interaction domain BD64_2757 PF13188 PAS domain BD64_2758 PF01266 FAD dependent oxidoreductase BD64_2759 PF05544 Proline racemase BD64_276 PF03816 Cell envelope-related transcriptional attenuator domain BD64_2760 PF05544 Proline racemase BD64_2761 PF00701 Dihydrodipicolinate synthetase family BD64_2762 PF00171 Aldehyde dehydrogenase family BD64_2763 PF01235 Sodium:alanine symporter family BD64_2764 PF02627 Carboxymuconolactone decarboxylase family BD64_2766 PF18416 N-acetylglucosamine binding protein domain 2 BD64_2766 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading BD64_2767 PF02833 DHHA2 domain BD64_2767 PF01368 DHH family BD64_277 PF09186 Domain of unknown function (DUF1949) BD64_277 PF01205 Uncharacterized protein family UPF0029 BD64_2775 PF00270 DEAD/DEAH box helicase BD64_2775 PF00271 Helicase conserved C-terminal domain BD64_2775 PF09382 RQC domain BD64_2775 PF16124 RecQ zinc-binding BD64_2775 PF00570 HRDC domain BD64_2776 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like BD64_2779 PF13538 UvrD-like helicase C-terminal domain BD64_278 PF02645 Uncharacterised protein, DegV family COG1307 BD64_279 PF01638 HxlR-like helix-turn-helix BD64_2790 PF00753 Metallo-beta-lactamase superfamily BD64_2790 PF13567 Domain of unknown function (DUF4131) BD64_2790 PF03772 Competence protein BD64_2795 PF10990 Protein of unknown function (DUF2809) BD64_2799 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading BD64_2799 PF18416 N-acetylglucosamine binding protein domain 2 BD64_28 PF02028 BCCT, betaine/carnitine/choline family transporter BD64_280 PF00877 NlpC/P60 family BD64_280 PF01476 LysM domain BD64_2800 PF13673 Acetyltransferase (GNAT) domain BD64_2801 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BD64_2804 PF00574 Clp protease BD64_2805 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BD64_2806 PF00005 ABC transporter BD64_2806 PF00571 CBS domain BD64_2807 PF00528 Binding-protein-dependent transport system inner membrane component BD64_281 PF00271 Helicase conserved C-terminal domain BD64_281 PF04851 Type III restriction enzyme, res subunit BD64_2813 PF04229 GrpB protein BD64_2813 PF13673 Acetyltransferase (GNAT) domain BD64_2814 PF00106 short chain dehydrogenase BD64_2816 PF00676 Dehydrogenase E1 component BD64_2817 PF02780 Transketolase, C-terminal domain BD64_2817 PF02779 Transketolase, pyrimidine binding domain BD64_2818 PF02817 e3 binding domain BD64_2818 PF00364 Biotin-requiring enzyme BD64_2818 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BD64_2819 PF07992 Pyridine nucleotide-disulphide oxidoreductase BD64_2819 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BD64_2823 PF02082 Transcriptional regulator BD64_2824 PF00403 Heavy-metal-associated domain BD64_2824 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BD64_2824 PF07992 Pyridine nucleotide-disulphide oxidoreductase BD64_2827 PF08220 DeoR-like helix-turn-helix domain BD64_2827 PF00455 DeoR C terminal sensor domain BD64_2828 PF13302 Acetyltransferase (GNAT) domain BD64_283 PF00313 'Cold-shock' DNA-binding domain BD64_2831 PF00158 Sigma-54 interaction domain BD64_2831 PF01590 GAF domain BD64_2831 PF02954 Bacterial regulatory protein, Fis family BD64_2836 PF13344 Haloacid dehalogenase-like hydrolase BD64_2836 PF00293 NUDIX domain BD64_2837 PF00440 Bacterial regulatory proteins, tetR family BD64_2837 PF08359 YsiA-like protein, C-terminal region BD64_2838 PF00266 Aminotransferase class-V BD64_2839 PF04199 Putative cyclase BD64_284 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus BD64_284 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BD64_2840 PF03301 Tryptophan 2,3-dioxygenase BD64_2843 PF01471 Putative peptidoglycan binding domain BD64_2843 PF07486 Cell Wall Hydrolase BD64_2844 PF14620 YpeB sporulation BD64_2844 PF03413 Peptidase propeptide and YPEB domain BD64_2845 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BD64_2848 PF06081 Aromatic acid exporter family member 1 BD64_285 PF01043 SecA preprotein cross-linking domain BD64_285 PF07517 SecA DEAD-like domain BD64_285 PF02810 SEC-C motif BD64_285 PF07516 SecA Wing and Scaffold domain BD64_2853 PF00561 alpha/beta hydrolase fold BD64_2854 PF00392 Bacterial regulatory proteins, gntR family BD64_2854 PF00155 Aminotransferase class I and II BD64_2855 PF00892 EamA-like transporter family BD64_2856 PF00308 Bacterial dnaA protein BD64_2856 PF08299 Bacterial dnaA protein helix-turn-helix BD64_2856 PF11638 DnaA N-terminal domain BD64_2857 PF00344 SecY translocase BD64_286 PF03462 PCRF domain BD64_286 PF00472 RF-1 domain BD64_2861 PF07504 Fungalysin/Thermolysin Propeptide Motif BD64_2861 PF01447 Thermolysin metallopeptidase, catalytic domain BD64_2861 PF03413 Peptidase propeptide and YPEB domain BD64_2861 PF02868 Thermolysin metallopeptidase, alpha-helical domain BD64_2862 PF00128 Alpha amylase, catalytic domain BD64_2862 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BD64_2862 PF03714 Bacterial pullanase-associated domain BD64_2864 PF00501 AMP-binding enzyme BD64_2864 PF00668 Condensation domain BD64_2864 PF13193 AMP-binding enzyme C-terminal domain BD64_2864 PF00550 Phosphopantetheine attachment site BD64_2865 PF00282 Pyridoxal-dependent decarboxylase conserved domain BD64_2867 PF07859 alpha/beta hydrolase fold BD64_287 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BD64_2870 PF13419 Haloacid dehalogenase-like hydrolase BD64_2875 PF01266 FAD dependent oxidoreductase BD64_288 PF00005 ABC transporter BD64_2883 PF01541 GIY-YIG catalytic domain BD64_2885 PF02673 Bacitracin resistance protein BacA BD64_2888 PF12867 DinB superfamily BD64_289 PF02687 FtsX-like permease family BD64_289 PF18075 FtsX extracellular domain BD64_2890 PF08000 Bacterial PH domain BD64_2891 PF01734 Patatin-like phospholipase BD64_2897 PF09234 Domain of unknown function (DUF1963) BD64_29 PF07690 Major Facilitator Superfamily BD64_290 PF17820 PDZ domain BD64_290 PF01471 Putative peptidoglycan binding domain BD64_290 PF03572 Peptidase family S41 BD64_2901 PF12706 Beta-lactamase superfamily domain BD64_2904 PF00293 NUDIX domain BD64_2905 PF02768 DNA polymerase III beta subunit, C-terminal domain BD64_2905 PF02767 DNA polymerase III beta subunit, central domain BD64_2905 PF00712 DNA polymerase III beta subunit, N-terminal domain BD64_2906 PF09297 NADH pyrophosphatase zinc ribbon domain BD64_2906 PF00293 NUDIX domain BD64_2908 PF07690 Major Facilitator Superfamily BD64_291 PF17820 PDZ domain BD64_2912 PF00293 NUDIX domain BD64_2914 PF01270 Glycosyl hydrolases family 8 BD64_2915 PF00892 EamA-like transporter family BD64_2916 PF00155 Aminotransferase class I and II BD64_2916 PF00392 Bacterial regulatory proteins, gntR family BD64_2917 PF00155 Aminotransferase class I and II BD64_2917 PF00392 Bacterial regulatory proteins, gntR family BD64_292 PF00664 ABC transporter transmembrane region BD64_292 PF00005 ABC transporter BD64_2920 PF03009 Glycerophosphoryl diester phosphodiesterase family BD64_2924 PF07690 Major Facilitator Superfamily BD64_2926 PF00144 Beta-lactamase BD64_2929 PF01965 DJ-1/PfpI family BD64_293 PF01906 Putative heavy-metal-binding BD64_2935 PF11954 Domain of unknown function (DUF3471) BD64_2935 PF00144 Beta-lactamase BD64_2938 PF00107 Zinc-binding dehydrogenase BD64_2938 PF08240 Alcohol dehydrogenase GroES-like domain BD64_2941 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_2941 PF00512 His Kinase A (phospho-acceptor) domain BD64_2944 PF12558 ATP-binding cassette cobalt transporter BD64_2944 PF00005 ABC transporter BD64_2945 PF07155 ECF-type riboflavin transporter, S component BD64_2946 PF01177 Asp/Glu/Hydantoin racemase BD64_2947 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BD64_2949 PF13188 PAS domain BD64_2949 PF13426 PAS domain BD64_2949 PF00989 PAS fold BD64_2949 PF00512 His Kinase A (phospho-acceptor) domain BD64_2949 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_295 PF03358 NADPH-dependent FMN reductase BD64_2953 PF00067 Cytochrome P450 BD64_2955 PF07561 Domain of Unknown Function (DUF1540) BD64_2956 PF00132 Bacterial transferase hexapeptide (six repeats) BD64_2958 PF00067 Cytochrome P450 BD64_296 PF09278 MerR, DNA binding BD64_296 PF00376 MerR family regulatory protein BD64_297 PF03466 LysR substrate binding domain BD64_297 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BD64_2974 PF03070 TENA/THI-4/PQQC family BD64_2975 PF07478 D-ala D-ala ligase C-terminus BD64_2975 PF01820 D-ala D-ala ligase N-terminus BD64_2976 PF00392 Bacterial regulatory proteins, gntR family BD64_2976 PF00155 Aminotransferase class I and II BD64_2977 PF03447 Homoserine dehydrogenase, NAD binding domain BD64_2977 PF00742 Homoserine dehydrogenase BD64_2977 PF01842 ACT domain BD64_298 PF03601 Conserved hypothetical protein 698 BD64_2981 PF02687 FtsX-like permease family BD64_2982 PF02687 FtsX-like permease family BD64_2983 PF00005 ABC transporter BD64_2988 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_2990 PF00486 Transcriptional regulatory protein, C terminal BD64_2990 PF00072 Response regulator receiver domain BD64_2991 PF00072 Response regulator receiver domain BD64_2991 PF00486 Transcriptional regulatory protein, C terminal BD64_2993 PF07486 Cell Wall Hydrolase BD64_2996 PF02875 Mur ligase family, glutamate ligase domain BD64_2996 PF08245 Mur ligase middle domain BD64_2996 PF01225 Mur ligase family, catalytic domain BD64_2997 PF01225 Mur ligase family, catalytic domain BD64_2997 PF08245 Mur ligase middle domain BD64_2997 PF02875 Mur ligase family, glutamate ligase domain BD64_30 PF07694 5TMR of 5TMR-LYT BD64_30 PF06580 Histidine kinase BD64_30 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_30 PF13492 GAF domain BD64_3000 PF08240 Alcohol dehydrogenase GroES-like domain BD64_3000 PF00107 Zinc-binding dehydrogenase BD64_3002 PF00392 Bacterial regulatory proteins, gntR family BD64_3002 PF00155 Aminotransferase class I and II BD64_3005 PF12833 Helix-turn-helix domain BD64_3006 PF01636 Phosphotransferase enzyme family BD64_3010 PF07690 Major Facilitator Superfamily BD64_3011 PF09278 MerR, DNA binding BD64_3011 PF00376 MerR family regulatory protein BD64_3012 PF00144 Beta-lactamase BD64_3015 PF17755 UvrA DNA-binding domain BD64_3015 PF17760 UvrA interaction domain BD64_3015 PF17760 UvrA interaction domain BD64_3015 PF17755 UvrA DNA-binding domain BD64_3019 PF03413 Peptidase propeptide and YPEB domain BD64_3019 PF01447 Thermolysin metallopeptidase, catalytic domain BD64_3019 PF02868 Thermolysin metallopeptidase, alpha-helical domain BD64_3019 PF07504 Fungalysin/Thermolysin Propeptide Motif BD64_302 PF13411 MerR HTH family regulatory protein BD64_302 PF07739 TipAS antibiotic-recognition domain BD64_3020 PF07504 Fungalysin/Thermolysin Propeptide Motif BD64_3020 PF01447 Thermolysin metallopeptidase, catalytic domain BD64_3020 PF02868 Thermolysin metallopeptidase, alpha-helical domain BD64_3020 PF03413 Peptidase propeptide and YPEB domain BD64_3024 PF01048 Phosphorylase superfamily BD64_3025 PF13021 Domain of unknown function (DUF3885) BD64_3026 PF01966 HD domain BD64_3027 PF00072 Response regulator receiver domain BD64_3027 PF00486 Transcriptional regulatory protein, C terminal BD64_3028 PF00512 His Kinase A (phospho-acceptor) domain BD64_3028 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_3029 PF07943 Penicillin-binding protein 5, C-terminal domain BD64_3029 PF00768 D-alanyl-D-alanine carboxypeptidase BD64_3030 PF05163 DinB family BD64_3032 PF00485 Phosphoribulokinase / Uridine kinase family BD64_3033 PF00583 Acetyltransferase (GNAT) family BD64_3035 PF13193 AMP-binding enzyme C-terminal domain BD64_3035 PF00501 AMP-binding enzyme BD64_3035 PF16177 Acetyl-coenzyme A synthetase N-terminus BD64_3036 PF01039 Carboxyl transferase domain BD64_3037 PF00378 Enoyl-CoA hydratase/isomerase BD64_3038 PF00682 HMGL-like BD64_3039 PF00364 Biotin-requiring enzyme BD64_3040 PF00289 Biotin carboxylase, N-terminal domain BD64_3040 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BD64_3040 PF02785 Biotin carboxylase C-terminal domain BD64_3041 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BD64_3041 PF02770 Acyl-CoA dehydrogenase, middle domain BD64_3041 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BD64_3046 PF00005 ABC transporter BD64_3049 PF00581 Rhodanese-like domain BD64_305 PF12323 Helix-turn-helix domain BD64_305 PF01385 Probable transposase BD64_305 PF07282 Putative transposase DNA-binding domain BD64_3050 PF07992 Pyridine nucleotide-disulphide oxidoreductase BD64_3052 PF13302 Acetyltransferase (GNAT) domain BD64_3053 PF03707 Bacterial signalling protein N terminal repeat BD64_3053 PF00563 EAL domain BD64_3053 PF00990 Diguanylate cyclase, GGDEF domain BD64_3056 PF00440 Bacterial regulatory proteins, tetR family BD64_3059 PF00395 S-layer homology domain BD64_3059 PF01520 N-acetylmuramoyl-L-alanine amidase BD64_306 PF17757 UvrB interaction domain BD64_306 PF00271 Helicase conserved C-terminal domain BD64_306 PF04851 Type III restriction enzyme, res subunit BD64_306 PF02151 UvrB/uvrC motif BD64_306 PF12344 Ultra-violet resistance protein B BD64_3061 PF02557 D-alanyl-D-alanine carboxypeptidase BD64_3064 PF01381 Helix-turn-helix BD64_3065 PF18801 response regulator aspartate phosphatase H, N terminal BD64_3067 PF00149 Calcineurin-like phosphoesterase BD64_3067 PF02872 5'-nucleotidase, C-terminal domain BD64_3068 PF02872 5'-nucleotidase, C-terminal domain BD64_3068 PF00149 Calcineurin-like phosphoesterase BD64_307 PF00005 ABC transporter BD64_307 PF17755 UvrA DNA-binding domain BD64_307 PF17760 UvrA interaction domain BD64_3072 PF04962 KduI/IolB family BD64_3073 PF01116 Fructose-bisphosphate aldolase class-II BD64_3074 PF01261 Xylose isomerase-like TIM barrel BD64_3075 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BD64_3075 PF00205 Thiamine pyrophosphate enzyme, central domain BD64_3075 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BD64_3076 PF00171 Aldehyde dehydrogenase family BD64_3077 PF00294 pfkB family carbohydrate kinase BD64_3078 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BD64_3078 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BD64_3079 PF07690 Major Facilitator Superfamily BD64_3080 PF00356 Bacterial regulatory proteins, lacI family BD64_3081 PF01569 PAP2 superfamily BD64_3085 PF00905 Penicillin binding protein transpeptidase domain BD64_3085 PF03717 Penicillin-binding Protein dimerisation domain BD64_3087 PF04542 Sigma-70 region 2 BD64_3087 PF08281 Sigma-70, region 4 BD64_309 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV BD64_3091 PF01546 Peptidase family M20/M25/M40 BD64_3091 PF07687 Peptidase dimerisation domain BD64_3097 PF14171 Toxin SpoIISA, type II toxin-antitoxin system BD64_3098 PF00300 Histidine phosphatase superfamily (branch 1) BD64_3099 PF12802 MarR family BD64_31 PF00072 Response regulator receiver domain BD64_31 PF04397 LytTr DNA-binding domain BD64_310 PF02603 HPr Serine kinase N terminus BD64_310 PF07475 HPr Serine kinase C-terminal domain BD64_3100 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BD64_3100 PF00205 Thiamine pyrophosphate enzyme, central domain BD64_3100 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BD64_3101 PF08241 Methyltransferase domain BD64_3103 PF09313 Domain of unknown function (DUF1971) BD64_3103 PF03848 Tellurite resistance protein TehB BD64_3104 PF02687 FtsX-like permease family BD64_3104 PF12704 MacB-like periplasmic core domain BD64_3104 PF00005 ABC transporter BD64_3107 PF00440 Bacterial regulatory proteins, tetR family BD64_3107 PF17932 Tetracyclin repressor-like, C-terminal domain BD64_3109 PF00270 DEAD/DEAH box helicase BD64_3109 PF00271 Helicase conserved C-terminal domain BD64_311 PF01790 Prolipoprotein diacylglyceryl transferase BD64_3112 PF00753 Metallo-beta-lactamase superfamily BD64_3112 PF16123 Hydroxyacylglutathione hydrolase C-terminus BD64_3114 PF00291 Pyridoxal-phosphate dependent enzyme BD64_3115 PF00266 Aminotransferase class-V BD64_3116 PF02660 Glycerol-3-phosphate acyltransferase BD64_3117 PF01869 BadF/BadG/BcrA/BcrD ATPase family BD64_3118 PF03702 Anhydro-N-acetylmuramic acid kinase BD64_312 PF13419 Haloacid dehalogenase-like hydrolase BD64_3120 PF02378 Phosphotransferase system, EIIC BD64_3122 PF02638 Glycosyl hydrolase-like 10 BD64_3127 PF12680 SnoaL-like domain BD64_3127 PF08281 Sigma-70, region 4 BD64_3127 PF04542 Sigma-70 region 2 BD64_3128 PF00890 FAD binding domain BD64_313 PF14602 Hexapeptide repeat of succinyl-transferase BD64_3132 PF01381 Helix-turn-helix BD64_3132 PF07883 Cupin domain BD64_3133 PF01810 LysE type translocator BD64_3136 PF00664 ABC transporter transmembrane region BD64_3136 PF00005 ABC transporter BD64_3137 PF00005 ABC transporter BD64_3137 PF00664 ABC transporter transmembrane region BD64_3140 PF03473 MOSC domain BD64_3140 PF03475 3-alpha domain BD64_3141 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BD64_3141 PF03466 LysR substrate binding domain BD64_3144 PF01118 Semialdehyde dehydrogenase, NAD binding domain BD64_3144 PF02774 Semialdehyde dehydrogenase, dimerisation domain BD64_3145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BD64_3145 PF03466 LysR substrate binding domain BD64_315 PF07992 Pyridine nucleotide-disulphide oxidoreductase BD64_3157 PF00313 'Cold-shock' DNA-binding domain BD64_3159 PF13302 Acetyltransferase (GNAT) domain BD64_3167 PF00583 Acetyltransferase (GNAT) family BD64_317 PF00293 NUDIX domain BD64_3170 PF00302 Chloramphenicol acetyltransferase BD64_3172 PF03176 MMPL family BD64_3174 PF16123 Hydroxyacylglutathione hydrolase C-terminus BD64_3174 PF00753 Metallo-beta-lactamase superfamily BD64_318 PF03668 P-loop ATPase protein family BD64_3183 PF13649 Methyltransferase domain BD64_3188 PF07690 Major Facilitator Superfamily BD64_3189 PF12146 Serine aminopeptidase, S33 BD64_319 PF01933 Uncharacterised protein family UPF0052 BD64_3193 PF03129 Anticodon binding domain BD64_3193 PF02824 TGS domain BD64_3193 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BD64_3193 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BD64_3194 PF01479 S4 domain BD64_3194 PF00849 RNA pseudouridylate synthase BD64_3195 PF16291 Domain of unknown function (DUF4937 BD64_3198 PF01235 Sodium:alanine symporter family BD64_3199 PF00082 Subtilase family BD64_32 PF03788 LrgA family BD64_320 PF02650 WhiA C-terminal HTH domain BD64_320 PF14527 WhiA LAGLIDADG-like domain BD64_320 PF10298 WhiA N-terminal LAGLIDADG-like domain BD64_3200 PF05163 DinB family BD64_3202 PF00216 Bacterial DNA-binding protein BD64_3205 PF07690 Major Facilitator Superfamily BD64_3206 PF03621 MbtH-like protein BD64_3207 PF00975 Thioesterase domain BD64_3207 PF00550 Phosphopantetheine attachment site BD64_3207 PF00501 AMP-binding enzyme BD64_3207 PF00668 Condensation domain BD64_3207 PF13193 AMP-binding enzyme C-terminal domain BD64_3208 PF00857 Isochorismatase family BD64_3208 PF00550 Phosphopantetheine attachment site BD64_3209 PF13193 AMP-binding enzyme C-terminal domain BD64_3209 PF00501 AMP-binding enzyme BD64_321 PF00381 PTS HPr component phosphorylation site BD64_3210 PF00425 chorismate binding enzyme BD64_3211 PF00106 short chain dehydrogenase BD64_3212 PF07690 Major Facilitator Superfamily BD64_3214 PF01022 Bacterial regulatory protein, arsR family BD64_3216 PF13476 AAA domain BD64_3217 PF00149 Calcineurin-like phosphoesterase BD64_3217 PF12320 Type 5 capsule protein repressor C-terminal domain BD64_3218 PF10763 Protein of unknown function (DUF2584) BD64_322 PF00574 Clp protease BD64_3220 PF00378 Enoyl-CoA hydratase/isomerase BD64_3221 PF01810 LysE type translocator BD64_3222 PF00171 Aldehyde dehydrogenase family BD64_3223 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BD64_3223 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BD64_3224 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BD64_3224 PF02770 Acyl-CoA dehydrogenase, middle domain BD64_3224 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BD64_3226 PF03972 MmgE/PrpD family BD64_3227 PF00285 Citrate synthase, C-terminal domain BD64_3228 PF01521 Iron-sulphur cluster biosynthesis BD64_323 PF04239 Protein of unknown function (DUF421) BD64_3231 PF00905 Penicillin binding protein transpeptidase domain BD64_3231 PF00912 Transglycosylase BD64_3235 PF10676 Spore germination protein gerPA/gerPF BD64_325 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BD64_3255 PF04471 Restriction endonuclease BD64_3257 PF00395 S-layer homology domain BD64_3257 PF00150 Cellulase (glycosyl hydrolase family 5) BD64_3257 PF03424 Carbohydrate binding domain (family 17/28) BD64_3258 PF04740 LXG domain of WXG superfamily BD64_3258 PF14436 Bacterial EndoU nuclease BD64_326 PF07451 Stage V sporulation protein AD (SpoVAD) BD64_3260 PF00085 Thioredoxin BD64_3261 PF01569 PAP2 superfamily BD64_3262 PF01545 Cation efflux family BD64_3262 PF16916 Dimerisation domain of Zinc Transporter BD64_3263 PF07070 SpoOM protein BD64_3266 PF14162 YozD-like protein BD64_3269 PF06855 YozE SAM-like fold BD64_327 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BD64_3270 PF14122 YokU-like protein, putative antitoxin BD64_3271 PF12544 Lysine-2,3-aminomutase BD64_3272 PF13426 PAS domain BD64_3272 PF00158 Sigma-54 interaction domain BD64_3272 PF02954 Bacterial regulatory protein, Fis family BD64_3273 PF00583 Acetyltransferase (GNAT) family BD64_3274 PF01546 Peptidase family M20/M25/M40 BD64_3274 PF07687 Peptidase dimerisation domain BD64_3275 PF01144 Coenzyme A transferase BD64_3276 PF01144 Coenzyme A transferase BD64_3277 PF00202 Aminotransferase class-III BD64_3279 PF09385 Histidine kinase N terminal BD64_3280 PF07997 Protein of unknown function (DUF1694) BD64_3281 PF00171 Aldehyde dehydrogenase family BD64_3282 PF03471 Transporter associated domain BD64_3282 PF00571 CBS domain BD64_3282 PF01595 Cyclin M transmembrane N-terminal domain BD64_3288 PF13520 Amino acid permease BD64_3289 PF00528 Binding-protein-dependent transport system inner membrane component BD64_3290 PF00571 CBS domain BD64_3290 PF00005 ABC transporter BD64_3293 PF03358 NADPH-dependent FMN reductase BD64_3296 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BD64_3296 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BD64_3297 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BD64_3297 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BD64_33 PF04172 LrgB-like family BD64_3301 PF00144 Beta-lactamase BD64_3304 PF00107 Zinc-binding dehydrogenase BD64_3304 PF08240 Alcohol dehydrogenase GroES-like domain BD64_3305 PF01418 Helix-turn-helix domain, rpiR family BD64_3305 PF01380 SIS domain BD64_3307 PF00072 Response regulator receiver domain BD64_3307 PF00196 Bacterial regulatory proteins, luxR family BD64_3308 PF13185 GAF domain BD64_3308 PF07730 Histidine kinase BD64_3309 PF00924 Mechanosensitive ion channel BD64_331 PF04552 Sigma-54, DNA binding domain BD64_331 PF00309 Sigma-54 factor, Activator interacting domain (AID) BD64_331 PF04963 Sigma-54 factor, core binding domain BD64_3310 PF00011 Hsp20/alpha crystallin family BD64_3311 PF00293 NUDIX domain BD64_3312 PF00857 Isochorismatase family BD64_3315 PF00881 Nitroreductase family BD64_3316 PF01063 Amino-transferase class IV BD64_3317 PF01497 Periplasmic binding protein BD64_3321 PF00733 Asparagine synthase BD64_3321 PF13537 Glutamine amidotransferase domain BD64_3322 PF00011 Hsp20/alpha crystallin family BD64_3323 PF02630 SCO1/SenC BD64_3325 PF02645 Uncharacterised protein, DegV family COG1307 BD64_3327 PF00902 Sec-independent protein translocase protein (TatC) BD64_3328 PF02416 mttA/Hcf106 family BD64_3329 PF03006 Haemolysin-III related BD64_333 PF04198 Putative sugar-binding domain BD64_3330 PF01553 Acyltransferase BD64_3331 PF02525 Flavodoxin-like fold BD64_3332 PF05223 NTF2-like N-terminal transpeptidase domain BD64_3332 PF03717 Penicillin-binding Protein dimerisation domain BD64_3332 PF00905 Penicillin binding protein transpeptidase domain BD64_3333 PF00186 Dihydrofolate reductase BD64_3334 PF00303 Thymidylate synthase BD64_3335 PF00144 Beta-lactamase BD64_3335 PF07930 D-aminopeptidase, domain B BD64_3339 PF13419 Haloacid dehalogenase-like hydrolase BD64_334 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BD64_334 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BD64_3340 PF14005 YpjP-like protein BD64_3341 PF05975 Bacterial ABC transporter protein EcsB BD64_3342 PF00005 ABC transporter BD64_3346 PF00583 Acetyltransferase (GNAT) family BD64_3347 PF01980 tRNA-methyltransferase O BD64_3348 PF01177 Asp/Glu/Hydantoin racemase BD64_3349 PF00465 Iron-containing alcohol dehydrogenase BD64_335 PF00162 Phosphoglycerate kinase BD64_3351 PF13419 Haloacid dehalogenase-like hydrolase BD64_3352 PF10997 Alternate to MurJ BD64_3355 PF00209 Sodium:neurotransmitter symporter family BD64_3358 PF00512 His Kinase A (phospho-acceptor) domain BD64_3358 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_3358 PF00672 HAMP domain BD64_3359 PF00486 Transcriptional regulatory protein, C terminal BD64_3359 PF00072 Response regulator receiver domain BD64_336 PF00121 Triosephosphate isomerase BD64_3360 PF00939 Sodium:sulfate symporter transmembrane region BD64_3361 PF02595 Glycerate kinase family BD64_337 PF01676 Metalloenzyme superfamily BD64_337 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BD64_338 PF00113 Enolase, C-terminal TIM barrel domain BD64_338 PF03952 Enolase, N-terminal domain BD64_3380 PF01580 FtsK/SpoIIIE family BD64_3380 PF12538 DNA transporter BD64_3384 PF01336 OB-fold nucleic acid binding domain BD64_3384 PF00152 tRNA synthetases class II (D, K and N) BD64_3385 PF01225 Mur ligase family, catalytic domain BD64_3385 PF02875 Mur ligase family, glutamate ligase domain BD64_3385 PF08245 Mur ligase middle domain BD64_3388 PF00133 tRNA synthetases class I (I, L, M and V) BD64_3388 PF08264 Anticodon-binding domain of tRNA BD64_339 PF00589 Phage integrase family BD64_339 PF02899 Phage integrase, N-terminal SAM-like domain BD64_3394 PF03485 Arginyl tRNA synthetase N terminal domain BD64_3394 PF05746 DALR anticodon binding domain BD64_3394 PF00750 tRNA synthetases class I (R) BD64_3395 PF04445 Putative SAM-dependent methyltransferase BD64_3396 PF06491 Disulphide isomerase BD64_3398 PF13769 Virulence factor BD64_3398 PF08712 Scaffold protein Nfu/NifU N terminal BD64_3399 PF01494 FAD binding domain BD64_34 PF01594 AI-2E family transporter BD64_3400 PF01494 FAD binding domain BD64_3401 PF00440 Bacterial regulatory proteins, tetR family BD64_3402 PF00436 Single-strand binding protein family BD64_3405 PF00005 ABC transporter BD64_3405 PF16326 ABC transporter C-terminal domain BD64_3405 PF12848 ABC transporter BD64_3406 PF01966 HD domain BD64_3409 PF01510 N-acetylmuramoyl-L-alanine amidase BD64_3412 PF04232 Stage V sporulation protein S (SpoVS) BD64_3419 PF04405 Domain of Unknown function (DUF542) BD64_3419 PF01814 Hemerythrin HHE cation binding domain BD64_3420 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BD64_3420 PF07992 Pyridine nucleotide-disulphide oxidoreductase BD64_3420 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BD64_3420 PF04324 BFD-like [2Fe-2S] binding domain BD64_3420 PF18267 Rubredoxin NAD+ reductase C-terminal domain BD64_3421 PF00355 Rieske [2Fe-2S] domain BD64_3422 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BD64_3423 PF01903 CbiX BD64_3427 PF07690 Major Facilitator Superfamily BD64_3429 PF02391 MoaE protein BD64_3430 PF03453 MoeA N-terminal region (domain I and II) BD64_3430 PF03454 MoeA C-terminal region (domain IV) BD64_3430 PF00994 Probable molybdopterin binding domain BD64_3431 PF00899 ThiF family BD64_3432 PF04055 Radical SAM superfamily BD64_3432 PF06463 Molybdenum Cofactor Synthesis C BD64_3433 PF00027 Cyclic nucleotide-binding domain BD64_3433 PF00325 Bacterial regulatory proteins, crp family BD64_3435 PF00005 ABC transporter BD64_3436 PF00392 Bacterial regulatory proteins, gntR family BD64_3436 PF00155 Aminotransferase class I and II BD64_3437 PF02665 Nitrate reductase gamma subunit BD64_3438 PF02613 Nitrate reductase delta subunit BD64_3439 PF14711 Respiratory nitrate reductase beta C-terminal BD64_3439 PF13247 4Fe-4S dicluster domain BD64_344 PF04860 Phage portal protein BD64_3440 PF01568 Molydopterin dinucleotide binding domain BD64_3440 PF14710 Respiratory nitrate reductase alpha N-terminal BD64_3440 PF00384 Molybdopterin oxidoreductase BD64_3443 PF17863 AAA lid domain BD64_3443 PF07726 ATPase family associated with various cellular activities (AAA) BD64_3444 PF01882 Protein of unknown function DUF58 BD64_3445 PF11992 Domain of unknown function (DUF3488) BD64_3445 PF13559 Domain of unknown function (DUF4129) BD64_3445 PF01841 Transglutaminase-like superfamily BD64_3446 PF00255 Glutathione peroxidase BD64_3451 PF08281 Sigma-70, region 4 BD64_3451 PF04542 Sigma-70 region 2 BD64_3452 PF00107 Zinc-binding dehydrogenase BD64_3452 PF08240 Alcohol dehydrogenase GroES-like domain BD64_3454 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BD64_3455 PF01261 Xylose isomerase-like TIM barrel BD64_3456 PF00271 Helicase conserved C-terminal domain BD64_3456 PF00270 DEAD/DEAH box helicase BD64_3458 PF01268 Formate--tetrahydrofolate ligase BD64_3459 PF01209 ubiE/COQ5 methyltransferase family BD64_3464 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BD64_3473 PF00583 Acetyltransferase (GNAT) family BD64_3479 PF00155 Aminotransferase class I and II BD64_3479 PF00392 Bacterial regulatory proteins, gntR family BD64_3480 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BD64_3480 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BD64_3481 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BD64_3485 PF01168 Alanine racemase, N-terminal domain BD64_3485 PF00842 Alanine racemase, C-terminal domain BD64_3488 PF00300 Histidine phosphatase superfamily (branch 1) BD64_3489 PF01145 SPFH domain / Band 7 family BD64_3491 PF07690 Major Facilitator Superfamily BD64_3492 PF01425 Amidase BD64_3494 PF02557 D-alanyl-D-alanine carboxypeptidase BD64_3496 PF07454 Stage II sporulation protein P (SpoIIP) BD64_35 PF01641 SelR domain BD64_35 PF01625 Peptide methionine sulfoxide reductase BD64_3500 PF01588 Putative tRNA binding domain BD64_3501 PF05525 Branched-chain amino acid transport protein BD64_3504 PF00571 CBS domain BD64_3504 PF03471 Transporter associated domain BD64_3504 PF01595 Cyclin M transmembrane N-terminal domain BD64_3505 PF04306 Protein of unknown function (DUF456) BD64_3506 PF13460 NAD(P)H-binding BD64_3509 PF13091 PLD-like domain BD64_3509 PF13396 Phospholipase_D-nuclease N-terminal BD64_3510 PF03061 Thioesterase superfamily BD64_3511 PF09323 Domain of unknown function (DUF1980) BD64_3512 PF03773 Predicted permease BD64_3514 PF01943 Polysaccharide biosynthesis protein BD64_3514 PF14667 Polysaccharide biosynthesis C-terminal domain BD64_3515 PF09335 SNARE associated Golgi protein BD64_3516 PF00293 NUDIX domain BD64_3517 PF08757 CotH kinase protein BD64_3519 PF00300 Histidine phosphatase superfamily (branch 1) BD64_3521 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BD64_3522 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BD64_3524 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BD64_3524 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BD64_3525 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BD64_3526 PF13460 NAD(P)H-binding BD64_3528 PF01297 Zinc-uptake complex component A periplasmic BD64_3528 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment BD64_3539 PF00583 Acetyltransferase (GNAT) family BD64_3540 PF02492 CobW/HypB/UreG, nucleotide-binding domain BD64_3540 PF07683 Cobalamin synthesis protein cobW C-terminal domain BD64_3541 PF00248 Aldo/keto reductase family BD64_3543 PF01593 Flavin containing amine oxidoreductase BD64_3545 PF00296 Luciferase-like monooxygenase BD64_3548 PF00210 Ferritin-like domain BD64_3552 PF02743 Cache domain BD64_3552 PF00672 HAMP domain BD64_3552 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD64_3553 PF03193 RsgA GTPase BD64_3557 PF07690 Major Facilitator Superfamily BD64_3558 PF00248 Aldo/keto reductase family BD64_3559 PF01022 Bacterial regulatory protein, arsR family BD64_3560 PF00082 Subtilase family BD64_3561 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BD64_3561 PF18277 AbrB C-terminal domain BD64_3562 PF02687 FtsX-like permease family BD64_3563 PF02687 FtsX-like permease family BD64_3564 PF02540 NAD synthase BD64_3565 PF00293 NUDIX domain BD64_3565 PF13344 Haloacid dehalogenase-like hydrolase BD64_3570 PF01734 Patatin-like phospholipase BD64_3572 PF01810 LysE type translocator BD64_3573 PF07690 Major Facilitator Superfamily BD64_3574 PF07690 Major Facilitator Superfamily BD64_3575 PF00269 Small, acid-soluble spore proteins, alpha/beta type BD64_3576 PF01261 Xylose isomerase-like TIM barrel BD64_3579 PF00501 AMP-binding enzyme BD64_3579 PF13193 AMP-binding enzyme C-terminal domain BD64_3580 PF06276 Ferric iron reductase FhuF-like transporter BD64_3580 PF04183 IucA / IucC family BD64_3581 PF06276 Ferric iron reductase FhuF-like transporter BD64_3581 PF04183 IucA / IucC family BD64_3582 PF00583 Acetyltransferase (GNAT) family BD64_3583 PF02308 MgtC family BD64_3585 PF01522 Polysaccharide deacetylase BD64_3586 PF16736 Single Cache-like BD64_3586 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_3586 PF00512 His Kinase A (phospho-acceptor) domain BD64_3586 PF00989 PAS fold BD64_3587 PF00486 Transcriptional regulatory protein, C terminal BD64_3587 PF00072 Response regulator receiver domain BD64_3589 PF03816 Cell envelope-related transcriptional attenuator domain BD64_3592 PF08544 GHMP kinases C terminal BD64_3592 PF00288 GHMP kinases N terminal domain BD64_3593 PF00291 Pyridoxal-phosphate dependent enzyme BD64_3594 PF01842 ACT domain BD64_3594 PF00742 Homoserine dehydrogenase BD64_3594 PF03447 Homoserine dehydrogenase, NAD binding domain BD64_3598 PF01522 Polysaccharide deacetylase BD64_3598 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain BD64_3599 PF04439 Streptomycin adenylyltransferase BD64_36 PF00873 AcrB/AcrD/AcrF family BD64_3600 PF00106 short chain dehydrogenase BD64_3602 PF16736 Single Cache-like BD64_3602 PF00512 His Kinase A (phospho-acceptor) domain BD64_3602 PF00989 PAS fold BD64_3602 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_3603 PF00486 Transcriptional regulatory protein, C terminal BD64_3603 PF00072 Response regulator receiver domain BD64_3604 PF00005 ABC transporter BD64_3604 PF00664 ABC transporter transmembrane region BD64_3605 PF00664 ABC transporter transmembrane region BD64_3605 PF00005 ABC transporter BD64_3607 PF01476 LysM domain BD64_3607 PF00877 NlpC/P60 family BD64_3609 PF00768 D-alanyl-D-alanine carboxypeptidase BD64_3609 PF07943 Penicillin-binding protein 5, C-terminal domain BD64_3610 PF02016 LD-carboxypeptidase N-terminal domain BD64_3610 PF17676 LD-carboxypeptidase C-terminal domain BD64_3613 PF00005 ABC transporter BD64_3613 PF00664 ABC transporter transmembrane region BD64_3614 PF00005 ABC transporter BD64_3614 PF00664 ABC transporter transmembrane region BD64_3615 PF02322 Cytochrome bd terminal oxidase subunit II BD64_3616 PF01654 Cytochrome bd terminal oxidase subunit I BD64_3618 PF01047 MarR family BD64_362 PF01156 Inosine-uridine preferring nucleoside hydrolase BD64_3622 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BD64_3622 PF03466 LysR substrate binding domain BD64_3624 PF02653 Branched-chain amino acid transport system / permease component BD64_3625 PF00005 ABC transporter BD64_3626 PF12399 Branched-chain amino acid ATP-binding cassette transporter BD64_3626 PF00005 ABC transporter BD64_3628 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BD64_3628 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BD64_3629 PF01575 MaoC like domain BD64_363 PF03788 LrgA family BD64_3630 PF13193 AMP-binding enzyme C-terminal domain BD64_3630 PF00501 AMP-binding enzyme BD64_3633 PF02492 CobW/HypB/UreG, nucleotide-binding domain BD64_3633 PF07683 Cobalamin synthesis protein cobW C-terminal domain BD64_3634 PF01593 Flavin containing amine oxidoreductase BD64_3635 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BD64_3635 PF00056 lactate/malate dehydrogenase, NAD binding domain BD64_3636 PF01594 AI-2E family transporter BD64_3637 PF01425 Amidase BD64_3639 PF00881 Nitroreductase family BD64_364 PF04172 LrgB-like family BD64_3640 PF01323 DSBA-like thioredoxin domain BD64_3641 PF02082 Transcriptional regulator BD64_3642 PF03466 LysR substrate binding domain BD64_3642 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BD64_3643 PF00892 EamA-like transporter family BD64_3645 PF07987 Domain of unkown function (DUF1775) BD64_3646 PF13115 YtkA-like BD64_3646 PF05425 Copper resistance protein D BD64_3646 PF04234 CopC domain BD64_3648 PF05525 Branched-chain amino acid transport protein BD64_3649 PF05525 Branched-chain amino acid transport protein BD64_365 PF03840 Preprotein translocase SecG subunit BD64_3650 PF02525 Flavodoxin-like fold BD64_3655 PF01551 Peptidase family M23 BD64_3656 PF07731 Multicopper oxidase BD64_3656 PF07732 Multicopper oxidase BD64_3657 PF00557 Metallopeptidase family M24 BD64_3657 PF05195 Aminopeptidase P, N-terminal domain BD64_366 PF12146 Serine aminopeptidase, S33 BD64_3661 PF05979 Bacterial protein of unknown function (DUF896) BD64_3662 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BD64_3663 PF02885 Glycosyl transferase family, helical bundle domain BD64_3663 PF00591 Glycosyl transferase family, a/b domain BD64_3663 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BD64_3664 PF07662 Na+ dependent nucleoside transporter C-terminus BD64_3664 PF01773 Na+ dependent nucleoside transporter N-terminus BD64_3665 PF01791 DeoC/LacD family aldolase BD64_3666 PF04198 Putative sugar-binding domain BD64_3668 PF05791 Bacillus haemolytic enterotoxin (HBL) BD64_3669 PF05791 Bacillus haemolytic enterotoxin (HBL) BD64_367 PF08206 Ribonuclease B OB domain BD64_367 PF00773 RNB domain BD64_367 PF17876 Cold shock domain BD64_367 PF00575 S1 RNA binding domain BD64_3671 PF13520 Amino acid permease BD64_3672 PF13520 Amino acid permease BD64_3674 PF02558 Ketopantoate reductase PanE/ApbA BD64_3674 PF08546 Ketopantoate reductase PanE/ApbA C terminal BD64_3677 PF01566 Natural resistance-associated macrophage protein BD64_3679 PF00512 His Kinase A (phospho-acceptor) domain BD64_3679 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_368 PF01668 SmpB protein BD64_3681 PF00072 Response regulator receiver domain BD64_3681 PF00486 Transcriptional regulatory protein, C terminal BD64_3682 PF13302 Acetyltransferase (GNAT) domain BD64_3683 PF13186 Iron-sulfur cluster-binding domain BD64_3683 PF04055 Radical SAM superfamily BD64_3688 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BD64_3689 PF12146 Serine aminopeptidase, S33 BD64_3689 PF13026 Protein of unknown function (DUF3887) BD64_369 PF00072 Response regulator receiver domain BD64_369 PF00486 Transcriptional regulatory protein, C terminal BD64_3690 PF01979 Amidohydrolase family BD64_3693 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BD64_3693 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BD64_3694 PF00072 Response regulator receiver domain BD64_3694 PF04397 LytTr DNA-binding domain BD64_3696 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BD64_3697 PF07690 Major Facilitator Superfamily BD64_37 PF00440 Bacterial regulatory proteins, tetR family BD64_3700 PF09587 Bacterial capsule synthesis protein PGA_cap BD64_3702 PF00585 C-terminal regulatory domain of Threonine dehydratase BD64_3702 PF00291 Pyridoxal-phosphate dependent enzyme BD64_3703 PF00920 Dehydratase family BD64_3704 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BD64_3704 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BD64_3705 PF10369 Small subunit of acetolactate synthase BD64_3706 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BD64_3706 PF00205 Thiamine pyrophosphate enzyme, central domain BD64_3706 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BD64_3707 PF01063 Amino-transferase class IV BD64_3709 PF01625 Peptide methionine sulfoxide reductase BD64_371 PF01032 FecCD transport family BD64_3713 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BD64_3713 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BD64_3716 PF04239 Protein of unknown function (DUF421) BD64_3718 PF01522 Polysaccharide deacetylase BD64_3718 PF03422 Carbohydrate binding module (family 6) BD64_3718 PF00457 Glycosyl hydrolases family 11 BD64_3719 PF00209 Sodium:neurotransmitter symporter family BD64_372 PF01032 FecCD transport family BD64_3720 PF01943 Polysaccharide biosynthesis protein BD64_3720 PF14667 Polysaccharide biosynthesis C-terminal domain BD64_3723 PF00291 Pyridoxal-phosphate dependent enzyme BD64_3724 PF07690 Major Facilitator Superfamily BD64_3725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BD64_3727 PF01926 50S ribosome-binding GTPase BD64_3727 PF13167 GTP-binding GTPase N-terminal BD64_3727 PF16360 GTP-binding GTPase Middle Region BD64_3729 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BD64_3729 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BD64_373 PF00005 ABC transporter BD64_3730 PF07690 Major Facilitator Superfamily BD64_3731 PF07690 Major Facilitator Superfamily BD64_3732 PF03976 Polyphosphate kinase 2 (PPK2) BD64_3733 PF02554 Carbon starvation protein CstA BD64_3736 PF07690 Major Facilitator Superfamily BD64_3738 PF00395 S-layer homology domain BD64_3738 PF13205 Bacterial Ig-like domain BD64_3738 PF02368 Bacterial Ig-like domain (group 2) BD64_3739 PF00293 NUDIX domain BD64_3740 PF14158 YndJ-like protein BD64_3741 PF13761 Domain of unknown function (DUF4166) BD64_3744 PF00696 Amino acid kinase family BD64_3744 PF13840 ACT domain BD64_3748 PF03590 Aspartate-ammonia ligase BD64_3750 PF00271 Helicase conserved C-terminal domain BD64_3750 PF00176 SNF2 family N-terminal domain BD64_3750 PF04434 SWIM zinc finger BD64_3751 PF00072 Response regulator receiver domain BD64_3751 PF08664 YcbB domain BD64_3752 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_3753 PF00390 Malic enzyme, N-terminal domain BD64_3753 PF03949 Malic enzyme, NAD binding domain BD64_3754 PF00206 Lyase BD64_3754 PF10415 Fumarase C C-terminus BD64_3755 PF00375 Sodium:dicarboxylate symporter family BD64_3756 PF00696 Amino acid kinase family BD64_3757 PF13091 PLD-like domain BD64_376 PF06146 Phosphate-starvation-inducible E BD64_3760 PF00005 ABC transporter BD64_3761 PF13185 GAF domain BD64_3761 PF13492 GAF domain BD64_3761 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_3761 PF07730 Histidine kinase BD64_3762 PF00072 Response regulator receiver domain BD64_3762 PF00196 Bacterial regulatory proteins, luxR family BD64_3767 PF04286 Protein of unknown function (DUF445) BD64_3768 PF00291 Pyridoxal-phosphate dependent enzyme BD64_377 PF13302 Acetyltransferase (GNAT) domain BD64_3773 PF00578 AhpC/TSA family BD64_3774 PF02683 Cytochrome C biogenesis protein transmembrane region BD64_3778 PF03575 Peptidase family S51 BD64_3779 PF01554 MatE BD64_3780 PF01554 MatE BD64_3784 PF00206 Lyase BD64_3784 PF10415 Fumarase C C-terminus BD64_3785 PF03553 Na+/H+ antiporter family BD64_3786 PF00535 Glycosyl transferase family 2 BD64_3788 PF03773 Predicted permease BD64_3789 PF02492 CobW/HypB/UreG, nucleotide-binding domain BD64_3789 PF07683 Cobalamin synthesis protein cobW C-terminal domain BD64_3790 PF00892 EamA-like transporter family BD64_3791 PF00392 Bacterial regulatory proteins, gntR family BD64_3791 PF07729 FCD domain BD64_3793 PF01545 Cation efflux family BD64_3793 PF16916 Dimerisation domain of Zinc Transporter BD64_3797 PF00733 Asparagine synthase BD64_3797 PF13537 Glutamine amidotransferase domain BD64_38 PF00535 Glycosyl transferase family 2 BD64_380 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BD64_3804 PF00300 Histidine phosphatase superfamily (branch 1) BD64_3806 PF07943 Penicillin-binding protein 5, C-terminal domain BD64_3806 PF00768 D-alanyl-D-alanine carboxypeptidase BD64_3809 PF10787 Uncharacterised protein from bacillus cereus group BD64_381 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BD64_3811 PF12706 Beta-lactamase superfamily domain BD64_3811 PF00753 Metallo-beta-lactamase superfamily BD64_3812 PF00528 Binding-protein-dependent transport system inner membrane component BD64_3814 PF00005 ABC transporter BD64_3814 PF08402 TOBE domain BD64_3819 PF08141 Small acid-soluble spore protein H family BD64_3820 PF03992 Antibiotic biosynthesis monooxygenase BD64_3823 PF17329 Family of unknown function (DUF5367) BD64_3824 PF00440 Bacterial regulatory proteins, tetR family BD64_3824 PF17932 Tetracyclin repressor-like, C-terminal domain BD64_3829 PF02272 DHHA1 domain BD64_3829 PF01411 tRNA synthetases class II (A) BD64_3829 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BD64_383 PF17202 Single cache domain 3 BD64_383 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD64_383 PF00672 HAMP domain BD64_3830 PF00460 Flagella basal body rod protein BD64_3830 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BD64_3831 PF00448 SRP54-type protein, GTPase domain BD64_3832 PF00771 FHIPEP family BD64_3833 PF01312 FlhB HrpN YscU SpaS Family BD64_3835 PF01313 Bacterial export proteins, family 3 BD64_3836 PF00813 FliP family BD64_3838 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BD64_3838 PF04509 CheC-like family BD64_3840 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BD64_3840 PF02154 Flagellar motor switch protein FliM BD64_3841 PF01464 Transglycosylase SLT domain BD64_3842 PF00700 Bacterial flagellin C-terminal helical region BD64_3842 PF00669 Bacterial flagellin N-terminal helical region BD64_3847 PF13181 Tetratricopeptide repeat BD64_3847 PF00535 Glycosyl transferase family 2 BD64_385 PF01565 FAD binding domain BD64_385 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BD64_3853 PF00535 Glycosyl transferase family 2 BD64_3854 PF12181 DNA binding domain of the motility gene repressor (MogR) BD64_3855 PF00072 Response regulator receiver domain BD64_3855 PF01584 CheW-like domain BD64_3859 PF00460 Flagella basal body rod protein BD64_3859 PF07559 Flagellar basal body protein FlaE BD64_3859 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BD64_386 PF01479 S4 domain BD64_386 PF00579 tRNA synthetases class I (W and Y) BD64_3864 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BD64_3864 PF02874 ATP synthase alpha/beta family, beta-barrel domain BD64_3864 PF18269 T3SS EscN ATPase C-terminal domain BD64_3866 PF14841 FliG middle domain BD64_3866 PF01706 FliG C-terminal domain BD64_3866 PF14842 FliG N-terminal domain BD64_3868 PF08345 Flagellar M-ring protein C-terminal BD64_3868 PF01514 Secretory protein of YscJ/FliF family BD64_3869 PF02049 Flagellar hook-basal body complex protein FliE BD64_387 PF07992 Pyridine nucleotide-disulphide oxidoreductase BD64_3870 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BD64_3870 PF00460 Flagella basal body rod protein BD64_3871 PF00460 Flagella basal body rod protein BD64_3876 PF00700 Bacterial flagellin C-terminal helical region BD64_3876 PF00669 Bacterial flagellin N-terminal helical region BD64_3877 PF00460 Flagella basal body rod protein BD64_3877 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BD64_388 PF07849 Protein of unknown function (DUF1641) BD64_3881 PF01739 CheR methyltransferase, SAM binding domain BD64_3881 PF03705 CheR methyltransferase, all-alpha domain BD64_3884 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BD64_3884 PF04509 CheC-like family BD64_3885 PF07194 P2 response regulator binding domain BD64_3885 PF01627 Hpt domain BD64_3885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_3885 PF02895 Signal transducing histidine kinase, homodimeric domain BD64_3885 PF01584 CheW-like domain BD64_3886 PF07194 P2 response regulator binding domain BD64_3886 PF01627 Hpt domain BD64_3886 PF02895 Signal transducing histidine kinase, homodimeric domain BD64_3886 PF01584 CheW-like domain BD64_3886 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_3887 PF00072 Response regulator receiver domain BD64_3888 PF13677 Membrane MotB of proton-channel complex MotA/MotB BD64_3888 PF00691 OmpA family BD64_3889 PF01618 MotA/TolQ/ExbB proton channel family BD64_389 PF01638 HxlR-like helix-turn-helix BD64_3891 PF17209 Hfq protein BD64_390 PF07690 Major Facilitator Superfamily BD64_3900 PF00881 Nitroreductase family BD64_3902 PF02698 DUF218 domain BD64_3903 PF04239 Protein of unknown function (DUF421) BD64_3905 PF13411 MerR HTH family regulatory protein BD64_3905 PF06445 GyrI-like small molecule binding domain BD64_3906 PF17770 Ribonuclease J C-terminal domain BD64_3906 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BD64_3906 PF00753 Metallo-beta-lactamase superfamily BD64_3907 PF00999 Sodium/hydrogen exchanger family BD64_3909 PF00202 Aminotransferase class-III BD64_391 PF00248 Aldo/keto reductase family BD64_3910 PF00474 Sodium:solute symporter family BD64_3911 PF04341 Protein of unknown function, DUF485 BD64_3914 PF01810 LysE type translocator BD64_3916 PF00313 'Cold-shock' DNA-binding domain BD64_3921 PF01263 Aldose 1-epimerase BD64_3922 PF13456 Reverse transcriptase-like BD64_3926 PF18014 Acetyltransferase (GNAT) domain BD64_3926 PF13673 Acetyltransferase (GNAT) domain BD64_3929 PF13439 Glycosyltransferase Family 4 BD64_3929 PF00534 Glycosyl transferases group 1 BD64_3930 PF00535 Glycosyl transferase family 2 BD64_3933 PF02397 Bacterial sugar transferase BD64_3940 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BD64_3940 PF01367 5'-3' exonuclease, C-terminal SAM fold BD64_3941 PF00690 Cation transporter/ATPase, N-terminus BD64_3941 PF00689 Cation transporting ATPase, C-terminus BD64_3943 PF03738 Glutathionylspermidine synthase preATP-grasp BD64_3946 PF00581 Rhodanese-like domain BD64_3947 PF10752 Protein of unknown function (DUF2533) BD64_3948 PF00583 Acetyltransferase (GNAT) family BD64_3950 PF00350 Dynamin family BD64_3952 PF04235 Protein of unknown function (DUF418) BD64_3953 PF00860 Permease family BD64_3954 PF00156 Phosphoribosyl transferase domain BD64_3955 PF00557 Metallopeptidase family M24 BD64_3956 PF01636 Phosphotransferase enzyme family BD64_3958 PF02074 Carboxypeptidase Taq (M32) metallopeptidase BD64_3959 PF13307 Helicase C-terminal domain BD64_396 PF13460 NAD(P)H-binding BD64_3961 PF01170 Putative RNA methylase family UPF0020 BD64_3961 PF02926 THUMP domain BD64_3962 PF05103 DivIVA protein BD64_3963 PF06908 YspA SLOG family BD64_397 PF01235 Sodium:alanine symporter family BD64_3970 PF10720 Protein of unknown function (DUF2515) BD64_3971 PF03838 Recombination protein U BD64_3972 PF00912 Transglycosylase BD64_3972 PF00905 Penicillin binding protein transpeptidase domain BD64_3974 PF00730 HhH-GPD superfamily base excision DNA repair protein BD64_3974 PF10576 Iron-sulfur binding domain of endonuclease III BD64_3974 PF00633 Helix-hairpin-helix motif BD64_3975 PF07261 Replication initiation and membrane attachment BD64_3976 PF00155 Aminotransferase class I and II BD64_3978 PF14084 Protein of unknown function (DUF4264) BD64_3979 PF13307 Helicase C-terminal domain BD64_3979 PF04851 Type III restriction enzyme, res subunit BD64_3979 PF00929 Exonuclease BD64_398 PF01235 Sodium:alanine symporter family BD64_3980 PF02261 Aspartate decarboxylase BD64_3981 PF02569 Pantoate-beta-alanine ligase BD64_3982 PF02548 Ketopantoate hydroxymethyltransferase BD64_3984 PF08279 HTH domain BD64_3984 PF02237 Biotin protein ligase C terminal domain BD64_3984 PF03099 Biotin/lipoate A/B protein ligase family BD64_3985 PF01743 Poly A polymerase head domain BD64_3985 PF12627 Probable RNA and SrmB- binding site of polymerase A BD64_3985 PF13735 tRNA nucleotidyltransferase domain 2 putative BD64_3986 PF00534 Glycosyl transferases group 1 BD64_3986 PF13439 Glycosyltransferase Family 4 BD64_3987 PF02585 GlcNAc-PI de-N-acetylase BD64_3988 PF02142 MGS-like domain BD64_3989 PF01113 Dihydrodipicolinate reductase, N-terminus BD64_3989 PF05173 Dihydrodipicolinate reductase, C-terminus BD64_399 PF07662 Na+ dependent nucleoside transporter C-terminus BD64_399 PF01773 Na+ dependent nucleoside transporter N-terminus BD64_3990 PF03819 MazG nucleotide pyrophosphohydrolase domain BD64_3991 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BD64_3991 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BD64_3993 PF04298 Putative neutral zinc metallopeptidase BD64_3994 PF09577 Sporulation protein YpjB (SpoYpjB) BD64_3996 PF07187 Protein of unknown function (DUF1405) BD64_3997 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BD64_3997 PF00032 Cytochrome b(C-terminal)/b6/petD BD64_3998 PF00033 Cytochrome b/b6/petB BD64_3999 PF00355 Rieske [2Fe-2S] domain BD64_400 PF01773 Na+ dependent nucleoside transporter N-terminus BD64_400 PF07662 Na+ dependent nucleoside transporter C-terminus BD64_4000 PF10673 Protein of unknown function (DUF2487) BD64_4001 PF08864 UPF0302 domain BD64_4001 PF08858 IDEAL domain BD64_4003 PF00155 Aminotransferase class I and II BD64_4004 PF01761 3-dehydroquinate synthase BD64_4005 PF01264 Chorismate synthase BD64_4006 PF00334 Nucleoside diphosphate kinase BD64_4007 PF00348 Polyprenyl synthetase BD64_4008 PF01209 ubiE/COQ5 methyltransferase family BD64_4009 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 BD64_4010 PF01227 GTP cyclohydrolase I BD64_4011 PF00216 Bacterial DNA-binding protein BD64_4012 PF09547 Stage IV sporulation protein A (spore_IV_A) BD64_4014 PF10966 Protein of unknown function (DUF2768) BD64_4016 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BD64_4016 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BD64_4017 PF01926 50S ribosome-binding GTPase BD64_4017 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BD64_4019 PF14045 YIEGIA protein BD64_402 PF04235 Protein of unknown function (DUF418) BD64_4021 PF14140 YpzI-like protein BD64_4022 PF01070 FMN-dependent dehydrogenase BD64_4023 PF00575 S1 RNA binding domain BD64_4024 PF02224 Cytidylate kinase BD64_4026 PF17763 Glutaminase/Asparaginase C-terminal domain BD64_4026 PF00710 Asparaginase, N-terminal BD64_403 PF00210 Ferritin-like domain BD64_4031 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BD64_4031 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BD64_4032 PF05389 Negative regulator of genetic competence (MecA) BD64_4033 PF13411 MerR HTH family regulatory protein BD64_4033 PF02607 B12 binding domain BD64_4033 PF02310 B12 binding domain BD64_4034 PF00149 Calcineurin-like phosphoesterase BD64_4036 PF02517 CPBP intramembrane metalloprotease BD64_4037 PF00271 Helicase conserved C-terminal domain BD64_4037 PF00270 DEAD/DEAH box helicase BD64_4038 PF14493 Helix-turn-helix domain BD64_4040 PF12822 ECF transporter, substrate-specific component BD64_4043 PF01923 Cobalamin adenosyltransferase BD64_4044 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_4044 PF18698 Histidine kinase sensor domain BD64_4044 PF00512 His Kinase A (phospho-acceptor) domain BD64_4044 PF00989 PAS fold BD64_4044 PF00672 HAMP domain BD64_4045 PF00486 Transcriptional regulatory protein, C terminal BD64_4045 PF00072 Response regulator receiver domain BD64_4046 PF01578 Cytochrome C assembly protein BD64_4047 PF05140 ResB-like family BD64_4048 PF00578 AhpC/TSA family BD64_4049 PF00849 RNA pseudouridylate synthase BD64_4049 PF01479 S4 domain BD64_405 PF03641 Possible lysine decarboxylase BD64_4050 PF07670 Nucleoside recognition BD64_4051 PF07670 Nucleoside recognition BD64_4052 PF00768 D-alanyl-D-alanine carboxypeptidase BD64_4052 PF07943 Penicillin-binding protein 5, C-terminal domain BD64_4053 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BD64_4053 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BD64_4056 PF09924 Uncharacterised conserved protein (DUF2156) BD64_4056 PF03706 Lysylphosphatidylglycerol synthase TM region BD64_4059 PF01048 Phosphorylase superfamily BD64_4060 PF00512 His Kinase A (phospho-acceptor) domain BD64_4060 PF00989 PAS fold BD64_4060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_4060 PF16736 Single Cache-like BD64_4061 PF00589 Phage integrase family BD64_4063 PF01904 Protein of unknown function DUF72 BD64_4064 PF00989 PAS fold BD64_4064 PF00512 His Kinase A (phospho-acceptor) domain BD64_4064 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_4067 PF00912 Transglycosylase BD64_4067 PF00905 Penicillin binding protein transpeptidase domain BD64_4068 PF01865 Protein of unknown function DUF47 BD64_4069 PF01384 Phosphate transporter family BD64_4070 PF01925 Sulfite exporter TauE/SafE BD64_4073 PF00970 Oxidoreductase FAD-binding domain BD64_4073 PF00042 Globin BD64_4073 PF00175 Oxidoreductase NAD-binding domain BD64_4078 PF08241 Methyltransferase domain BD64_408 PF00210 Ferritin-like domain BD64_4080 PF05525 Branched-chain amino acid transport protein BD64_4082 PF00196 Bacterial regulatory proteins, luxR family BD64_4082 PF00072 Response regulator receiver domain BD64_4083 PF00672 HAMP domain BD64_4083 PF07730 Histidine kinase BD64_4083 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_4084 PF09922 Cell wall-active antibiotics response 4TMS YvqF BD64_4087 PF03553 Na+/H+ antiporter family BD64_4089 PF00375 Sodium:dicarboxylate symporter family BD64_409 PF01235 Sodium:alanine symporter family BD64_4091 PF00209 Sodium:neurotransmitter symporter family BD64_4093 PF01903 CbiX BD64_4094 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BD64_4096 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BD64_4096 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BD64_4098 PF01747 ATP-sulfurylase BD64_4098 PF14306 PUA-like domain BD64_4099 PF01507 Phosphoadenosine phosphosulfate reductase family BD64_410 PF02080 TrkA-C domain BD64_4101 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BD64_4101 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BD64_4103 PF00884 Sulfatase BD64_4104 PF01066 CDP-alcohol phosphatidyltransferase BD64_4105 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BD64_4105 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BD64_4107 PF02811 PHP domain BD64_4108 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BD64_4109 PF01502 Phosphoribosyl-AMP cyclohydrolase BD64_411 PF00999 Sodium/hydrogen exchanger family BD64_4110 PF00977 Histidine biosynthesis protein BD64_4111 PF00977 Histidine biosynthesis protein BD64_4112 PF00117 Glutamine amidotransferase class-I BD64_4113 PF00475 Imidazoleglycerol-phosphate dehydratase BD64_4114 PF00815 Histidinol dehydrogenase BD64_4115 PF01634 ATP phosphoribosyltransferase BD64_4116 PF13393 Histidyl-tRNA synthetase BD64_4117 PF00694 Aconitase C-terminal domain BD64_4118 PF00330 Aconitase family (aconitate hydratase) BD64_4119 PF00180 Isocitrate/isopropylmalate dehydrogenase BD64_4120 PF08502 LeuA allosteric (dimerisation) domain BD64_4120 PF00682 HMGL-like BD64_4121 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BD64_4121 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BD64_4122 PF10369 Small subunit of acetolactate synthase BD64_4122 PF01842 ACT domain BD64_4123 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BD64_4123 PF00205 Thiamine pyrophosphate enzyme, central domain BD64_4123 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BD64_4124 PF01063 Amino-transferase class IV BD64_4127 PF03698 Uncharacterised protein family (UPF0180) BD64_4129 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BD64_413 PF01047 MarR family BD64_4131 PF02386 Cation transport protein BD64_4132 PF00375 Sodium:dicarboxylate symporter family BD64_4134 PF01047 MarR family BD64_4137 PF02673 Bacitracin resistance protein BacA BD64_4138 PF01554 MatE BD64_414 PF17954 Quercetinase C-terminal cupin domain BD64_414 PF02678 Pirin BD64_4142 PF01636 Phosphotransferase enzyme family BD64_4145 PF00258 Flavodoxin BD64_4147 PF07687 Peptidase dimerisation domain BD64_4147 PF01546 Peptidase family M20/M25/M40 BD64_4149 PF00501 AMP-binding enzyme BD64_4149 PF13193 AMP-binding enzyme C-terminal domain BD64_415 PF02868 Thermolysin metallopeptidase, alpha-helical domain BD64_415 PF03413 Peptidase propeptide and YPEB domain BD64_415 PF07504 Fungalysin/Thermolysin Propeptide Motif BD64_415 PF01447 Thermolysin metallopeptidase, catalytic domain BD64_4150 PF03062 MBOAT, membrane-bound O-acyltransferase family BD64_4151 PF00550 Phosphopantetheine attachment site BD64_4152 PF04914 DltD protein BD64_4153 PF03060 Nitronate monooxygenase BD64_4154 PF02016 LD-carboxypeptidase N-terminal domain BD64_4154 PF17676 LD-carboxypeptidase C-terminal domain BD64_4156 PF00857 Isochorismatase family BD64_4158 PF01037 Lrp/AsnC ligand binding domain BD64_416 PF01883 Iron-sulfur cluster assembly protein BD64_4162 PF00005 ABC transporter BD64_4164 PF00005 ABC transporter BD64_4165 PF00392 Bacterial regulatory proteins, gntR family BD64_4166 PF00268 Ribonucleotide reductase, small chain BD64_4167 PF08343 Ribonucleotide reductase N-terminal BD64_4167 PF00317 Ribonucleotide reductase, all-alpha domain BD64_4167 PF02867 Ribonucleotide reductase, barrel domain BD64_4169 PF08343 Ribonucleotide reductase N-terminal BD64_4169 PF00317 Ribonucleotide reductase, all-alpha domain BD64_4169 PF02867 Ribonucleotide reductase, barrel domain BD64_417 PF00672 HAMP domain BD64_417 PF02743 Cache domain BD64_417 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD64_4170 PF07972 NrdI Flavodoxin like BD64_4176 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) BD64_4177 PF14489 QueF-like protein BD64_4178 PF04055 Radical SAM superfamily BD64_4179 PF01242 6-pyruvoyl tetrahydropterin synthase BD64_4180 PF06508 Queuosine biosynthesis protein QueC BD64_4181 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_4181 PF13188 PAS domain BD64_4181 PF00989 PAS fold BD64_4181 PF00512 His Kinase A (phospho-acceptor) domain BD64_4181 PF13426 PAS domain BD64_4183 PF12867 DinB superfamily BD64_4185 PF01047 MarR family BD64_4186 PF00512 His Kinase A (phospho-acceptor) domain BD64_4186 PF02743 Cache domain BD64_4186 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_4187 PF09388 Spo0E like sporulation regulatory protein BD64_4188 PF04748 Divergent polysaccharide deacetylase BD64_419 PF09334 tRNA synthetases class I (M) BD64_419 PF08264 Anticodon-binding domain of tRNA BD64_4190 PF00596 Class II Aldolase and Adducin N-terminal domain BD64_4191 PF01520 N-acetylmuramoyl-L-alanine amidase BD64_4191 PF00395 S-layer homology domain BD64_4195 PF08220 DeoR-like helix-turn-helix domain BD64_4195 PF00455 DeoR C terminal sensor domain BD64_4197 PF00266 Aminotransferase class-V BD64_4198 PF13419 Haloacid dehalogenase-like hydrolase BD64_4199 PF00528 Binding-protein-dependent transport system inner membrane component BD64_4201 PF00005 ABC transporter BD64_4202 PF08402 TOBE domain BD64_4202 PF00005 ABC transporter BD64_4207 PF02386 Cation transport protein BD64_4209 PF00561 alpha/beta hydrolase fold BD64_4214 PF01575 MaoC like domain BD64_4215 PF00269 Small, acid-soluble spore proteins, alpha/beta type BD64_4216 PF02386 Cation transport protein BD64_4217 PF03741 Integral membrane protein TerC family BD64_4218 PF01226 Formate/nitrite transporter BD64_4220 PF01478 Type IV leader peptidase family BD64_4220 PF06750 Bacterial Peptidase A24 N-terminal domain BD64_4221 PF02589 LUD domain BD64_4222 PF02589 LUD domain BD64_4222 PF11870 Domain of unknown function (DUF3390) BD64_4222 PF13183 4Fe-4S dicluster domain BD64_4223 PF02754 Cysteine-rich domain BD64_4224 PF00392 Bacterial regulatory proteins, gntR family BD64_4224 PF07729 FCD domain BD64_4225 PF18698 Histidine kinase sensor domain BD64_4225 PF00512 His Kinase A (phospho-acceptor) domain BD64_4225 PF00989 PAS fold BD64_4225 PF00672 HAMP domain BD64_4225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_4226 PF00072 Response regulator receiver domain BD64_4226 PF00486 Transcriptional regulatory protein, C terminal BD64_4228 PF17853 GGDEF-like domain BD64_4228 PF05651 Putative sugar diacid recognition BD64_4228 PF13556 PucR C-terminal helix-turn-helix domain BD64_4229 PF01565 FAD binding domain BD64_4229 PF02913 FAD linked oxidases, C-terminal domain BD64_423 PF00072 Response regulator receiver domain BD64_423 PF00486 Transcriptional regulatory protein, C terminal BD64_4230 PF13183 4Fe-4S dicluster domain BD64_4230 PF02754 Cysteine-rich domain BD64_4231 PF00188 Cysteine-rich secretory protein family BD64_4233 PF00849 RNA pseudouridylate synthase BD64_4233 PF01479 S4 domain BD64_4235 PF03176 MMPL family BD64_4237 PF13416 Bacterial extracellular solute-binding protein BD64_4238 PF00528 Binding-protein-dependent transport system inner membrane component BD64_4239 PF00528 Binding-protein-dependent transport system inner membrane component BD64_424 PF03734 L,D-transpeptidase catalytic domain BD64_424 PF17969 L,D-transpeptidase C-terminal domain BD64_4240 PF08402 TOBE domain BD64_4240 PF00005 ABC transporter BD64_4241 PF00171 Aldehyde dehydrogenase family BD64_4242 PF05547 Immune inhibitor A peptidase M6 BD64_4243 PF08671 Anti-repressor SinI BD64_4243 PF01381 Helix-turn-helix BD64_4244 PF12389 Camelysin metallo-endopeptidase BD64_4246 PF12389 Camelysin metallo-endopeptidase BD64_4248 PF07943 Penicillin-binding protein 5, C-terminal domain BD64_4248 PF00768 D-alanyl-D-alanine carboxypeptidase BD64_4250 PF13649 Methyltransferase domain BD64_426 PF09335 SNARE associated Golgi protein BD64_4261 PF01381 Helix-turn-helix BD64_4262 PF16870 2-oxoglutarate dehydrogenase C-terminal BD64_4262 PF00676 Dehydrogenase E1 component BD64_4262 PF02779 Transketolase, pyrimidine binding domain BD64_4263 PF00364 Biotin-requiring enzyme BD64_4263 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BD64_4263 PF02817 e3 binding domain BD64_4269 PF07992 Pyridine nucleotide-disulphide oxidoreductase BD64_4269 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BD64_4273 PF10042 Uncharacterized conserved protein (DUF2278) BD64_4274 PF02652 L-lactate permease BD64_4276 PF00290 Tryptophan synthase alpha chain BD64_4277 PF00291 Pyridoxal-phosphate dependent enzyme BD64_4278 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BD64_4279 PF00218 Indole-3-glycerol phosphate synthase BD64_4280 PF02885 Glycosyl transferase family, helical bundle domain BD64_4280 PF00591 Glycosyl transferase family, a/b domain BD64_4281 PF00591 Glycosyl transferase family, a/b domain BD64_4281 PF00117 Glutamine amidotransferase class-I BD64_4281 PF02885 Glycosyl transferase family, helical bundle domain BD64_4283 PF00474 Sodium:solute symporter family BD64_4284 PF02368 Bacterial Ig-like domain (group 2) BD64_4287 PF00756 Putative esterase BD64_4289 PF13673 Acetyltransferase (GNAT) domain BD64_4290 PF00580 UvrD/REP helicase N-terminal domain BD64_4290 PF13361 UvrD-like helicase C-terminal domain BD64_4293 PF07098 Protein of unknown function (DUF1360) BD64_4297 PF04321 RmlD substrate binding domain BD64_4298 PF16363 GDP-mannose 4,6 dehydratase BD64_4299 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BD64_43 PF12848 ABC transporter BD64_43 PF00005 ABC transporter BD64_4300 PF00483 Nucleotidyl transferase BD64_4304 PF13181 Tetratricopeptide repeat BD64_4304 PF00535 Glycosyl transferase family 2 BD64_4306 PF05711 Macrocin-O-methyltransferase (TylF) BD64_4307 PF08241 Methyltransferase domain BD64_4308 PF00535 Glycosyl transferase family 2 BD64_4309 PF01098 Cell cycle protein BD64_4310 PF01098 Cell cycle protein BD64_4311 PF00149 Calcineurin-like phosphoesterase BD64_4314 PF00849 RNA pseudouridylate synthase BD64_4315 PF01513 ATP-NAD kinase BD64_4316 PF04607 Region found in RelA / SpoT proteins BD64_4318 PF01928 CYTH domain BD64_4319 PF01152 Bacterial-like globin BD64_4322 PF01432 Peptidase family M3 BD64_4322 PF08439 Oligopeptidase F BD64_4324 PF13396 Phospholipase_D-nuclease N-terminal BD64_4324 PF13091 PLD-like domain BD64_4325 PF05389 Negative regulator of genetic competence (MecA) BD64_4326 PF03741 Integral membrane protein TerC family BD64_4327 PF03960 ArsC family BD64_4329 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BD64_433 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BD64_433 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BD64_4330 PF01554 MatE BD64_4331 PF00005 ABC transporter BD64_4331 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BD64_4332 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BD64_4332 PF00005 ABC transporter BD64_4333 PF00528 Binding-protein-dependent transport system inner membrane component BD64_4333 PF12911 N-terminal TM domain of oligopeptide transport permease C BD64_4334 PF00528 Binding-protein-dependent transport system inner membrane component BD64_4335 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BD64_4337 PF00579 tRNA synthetases class I (W and Y) BD64_4338 PF12227 Protein of unknown function (DUF3603) BD64_4339 PF10026 Predicted Zn-dependent protease (DUF2268) BD64_4340 PF02801 Beta-ketoacyl synthase, C-terminal domain BD64_4340 PF00109 Beta-ketoacyl synthase, N-terminal domain BD64_4341 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BD64_4341 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BD64_4342 PF10815 ComZ BD64_4346 PF17871 AAA lid domain BD64_4346 PF00004 ATPase family associated with various cellular activities (AAA) BD64_4346 PF07724 AAA domain (Cdc48 subfamily) BD64_4346 PF02861 Clp amino terminal domain, pathogenicity island component BD64_4346 PF10431 C-terminal, D2-small domain, of ClpB protein BD64_4347 PF14168 YjzC-like protein BD64_435 PF02096 60Kd inner membrane protein BD64_4350 PF12758 Protein of unknown function (DUF3813) BD64_4351 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BD64_4351 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BD64_4353 PF00639 PPIC-type PPIASE domain BD64_4355 PF13509 S1 domain BD64_4355 PF17783 CvfB-like winged helix domain BD64_4356 PF04461 Protein of unknown function (DUF520) BD64_4358 PF00128 Alpha amylase, catalytic domain BD64_4359 PF00909 Ammonium Transporter Family BD64_4360 PF00199 Catalase BD64_4360 PF06628 Catalase-related immune-responsive BD64_4362 PF00733 Asparagine synthase BD64_4362 PF13537 Glutamine amidotransferase domain BD64_4364 PF07457 Protein of unknown function (DUF1516) BD64_4365 PF00202 Aminotransferase class-III BD64_4367 PF01557 Fumarylacetoacetate (FAA) hydrolase family BD64_4368 PF10676 Spore germination protein gerPA/gerPF BD64_4369 PF10803 Spore germination GerPB BD64_437 PF13520 Amino acid permease BD64_4370 PF10737 Spore germination protein GerPC BD64_4372 PF10970 Spore germination protein GerPE BD64_4373 PF10676 Spore germination protein gerPA/gerPF BD64_4375 PF12705 PD-(D/E)XK nuclease superfamily BD64_4375 PF00580 UvrD/REP helicase N-terminal domain BD64_4375 PF13361 UvrD-like helicase C-terminal domain BD64_4376 PF13361 UvrD-like helicase C-terminal domain BD64_4376 PF12705 PD-(D/E)XK nuclease superfamily BD64_4377 PF10502 Signal peptidase, peptidase S26 BD64_4378 PF09335 SNARE associated Golgi protein BD64_4379 PF06338 ComK protein BD64_438 PF07690 Major Facilitator Superfamily BD64_4382 PF00313 'Cold-shock' DNA-binding domain BD64_4384 PF00463 Isocitrate lyase family BD64_4385 PF01274 Malate synthase BD64_4386 PF00395 S-layer homology domain BD64_4388 PF00150 Cellulase (glycosyl hydrolase family 5) BD64_4388 PF00395 S-layer homology domain BD64_4388 PF03424 Carbohydrate binding domain (family 17/28) BD64_4389 PF00892 EamA-like transporter family BD64_4390 PF02743 Cache domain BD64_4390 PF00672 HAMP domain BD64_4390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD64_4391 PF16491 CAAX prenyl protease N-terminal, five membrane helices BD64_4391 PF01435 Peptidase family M48 BD64_4396 PF00486 Transcriptional regulatory protein, C terminal BD64_4396 PF00072 Response regulator receiver domain BD64_4397 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_4397 PF00512 His Kinase A (phospho-acceptor) domain BD64_44 PF00535 Glycosyl transferase family 2 BD64_4400 PF12833 Helix-turn-helix domain BD64_4400 PF06445 GyrI-like small molecule binding domain BD64_4401 PF04542 Sigma-70 region 2 BD64_4401 PF08281 Sigma-70, region 4 BD64_4403 PF01966 HD domain BD64_4404 PF00149 Calcineurin-like phosphoesterase BD64_4406 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BD64_4411 PF05593 RHS Repeat BD64_4414 PF05593 RHS Repeat BD64_4415 PF01520 N-acetylmuramoyl-L-alanine amidase BD64_4415 PF00395 S-layer homology domain BD64_4417 PF00501 AMP-binding enzyme BD64_4417 PF13193 AMP-binding enzyme C-terminal domain BD64_4419 PF03099 Biotin/lipoate A/B protein ligase family BD64_4419 PF10437 Bacterial lipoate protein ligase C-terminus BD64_442 PF02743 Cache domain BD64_442 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD64_442 PF00672 HAMP domain BD64_4420 PF12706 Beta-lactamase superfamily domain BD64_4421 PF14149 YhfH-like protein BD64_4422 PF00356 Bacterial regulatory proteins, lacI family BD64_4428 PF17932 Tetracyclin repressor-like, C-terminal domain BD64_4428 PF00440 Bacterial regulatory proteins, tetR family BD64_443 PF01910 Thiamine-binding protein BD64_4430 PF03965 Penicillinase repressor BD64_4437 PF01208 Uroporphyrinogen decarboxylase (URO-D) BD64_4438 PF00912 Transglycosylase BD64_4438 PF00905 Penicillin binding protein transpeptidase domain BD64_4439 PF03992 Antibiotic biosynthesis monooxygenase BD64_444 PF10835 Protein of unknown function (DUF2573) BD64_4440 PF03703 Bacterial PH domain BD64_4441 PF03703 Bacterial PH domain BD64_445 PF01619 Proline dehydrogenase BD64_4450 PF03703 Bacterial PH domain BD64_4452 PF03703 Bacterial PH domain BD64_4454 PF17934 Tetracyclin repressor-like, C-terminal domain BD64_4454 PF00440 Bacterial regulatory proteins, tetR family BD64_4456 PF12787 EcsC protein family BD64_4457 PF05975 Bacterial ABC transporter protein EcsB BD64_4458 PF00005 ABC transporter BD64_4459 PF01230 HIT domain BD64_446 PF00768 D-alanyl-D-alanine carboxypeptidase BD64_446 PF07943 Penicillin-binding protein 5, C-terminal domain BD64_4460 PF12732 YtxH-like protein BD64_4461 PF01047 MarR family BD64_4465 PF13538 UvrD-like helicase C-terminal domain BD64_4467 PF07690 Major Facilitator Superfamily BD64_4468 PF07690 Major Facilitator Superfamily BD64_447 PF14115 YuzL-like protein BD64_4473 PF08281 Sigma-70, region 4 BD64_4473 PF04542 Sigma-70 region 2 BD64_4476 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BD64_4476 PF01266 FAD dependent oxidoreductase BD64_4477 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BD64_4477 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BD64_4478 PF00230 Major intrinsic protein BD64_4479 PF04309 Glycerol-3-phosphate responsive antiterminator BD64_448 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BD64_448 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BD64_448 PF00378 Enoyl-CoA hydratase/isomerase BD64_4483 PF00561 alpha/beta hydrolase fold BD64_4483 PF08386 TAP-like protein BD64_4485 PF18801 response regulator aspartate phosphatase H, N terminal BD64_4488 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BD64_4489 PF07690 Major Facilitator Superfamily BD64_449 PF02803 Thiolase, C-terminal domain BD64_449 PF00108 Thiolase, N-terminal domain BD64_4490 PF00440 Bacterial regulatory proteins, tetR family BD64_4491 PF01336 OB-fold nucleic acid binding domain BD64_4491 PF01966 HD domain BD64_4493 PF12323 Helix-turn-helix domain BD64_4493 PF07282 Putative transposase DNA-binding domain BD64_4493 PF01385 Probable transposase BD64_4494 PF13514 AAA domain BD64_4495 PF00149 Calcineurin-like phosphoesterase BD64_4498 PF11121 Protein of unknown function (DUF2639) BD64_4499 PF08240 Alcohol dehydrogenase GroES-like domain BD64_4499 PF00107 Zinc-binding dehydrogenase BD64_450 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BD64_450 PF02770 Acyl-CoA dehydrogenase, middle domain BD64_450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BD64_4501 PF01906 Putative heavy-metal-binding BD64_4506 PF00512 His Kinase A (phospho-acceptor) domain BD64_4506 PF01627 Hpt domain BD64_4506 PF00072 Response regulator receiver domain BD64_4506 PF00497 Bacterial extracellular solute-binding proteins, family 3 BD64_4506 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_4507 PF03705 CheR methyltransferase, all-alpha domain BD64_4507 PF01739 CheR methyltransferase, SAM binding domain BD64_4508 PF13426 PAS domain BD64_4508 PF07228 Stage II sporulation protein E (SpoIIE) BD64_451 PF00753 Metallo-beta-lactamase superfamily BD64_4510 PF04545 Sigma-70, region 4 BD64_4510 PF04539 Sigma-70 region 3 BD64_4510 PF04542 Sigma-70 region 2 BD64_4511 PF13581 Histidine kinase-like ATPase domain BD64_4512 PF01740 STAS domain BD64_4515 PF05532 CsbD-like BD64_4516 PF11181 Heat induced stress protein YflT BD64_452 PF00440 Bacterial regulatory proteins, tetR family BD64_452 PF13305 Tetracyclin repressor-like, C-terminal domain BD64_4520 PF00395 S-layer homology domain BD64_4525 PF01966 HD domain BD64_4525 PF00672 HAMP domain BD64_4530 PF02082 Transcriptional regulator BD64_4531 PF02525 Flavodoxin-like fold BD64_4532 PF02733 Dak1 domain BD64_4534 PF02733 Dak1 domain BD64_4538 PF01066 CDP-alcohol phosphatidyltransferase BD64_4542 PF18665 Tetracyclin repressor-like, C-terminal domain BD64_4542 PF00440 Bacterial regulatory proteins, tetR family BD64_4543 PF07993 Male sterility protein BD64_4543 PF00550 Phosphopantetheine attachment site BD64_4553 PF07690 Major Facilitator Superfamily BD64_4556 PF01925 Sulfite exporter TauE/SafE BD64_4561 PF00772 DnaB-like helicase N terminal domain BD64_4561 PF03796 DnaB-like helicase C terminal domain BD64_4564 PF06445 GyrI-like small molecule binding domain BD64_4564 PF13411 MerR HTH family regulatory protein BD64_4568 PF02342 TerD domain BD64_4569 PF03401 Tripartite tricarboxylate transporter family receptor BD64_457 PF00056 lactate/malate dehydrogenase, NAD binding domain BD64_457 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BD64_4570 PF08279 HTH domain BD64_4570 PF00072 Response regulator receiver domain BD64_4570 PF12431 Transcriptional regulator BD64_4571 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_4571 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BD64_4572 PF00083 Sugar (and other) transporter BD64_4578 PF00005 ABC transporter BD64_4578 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BD64_4579 PF00005 ABC transporter BD64_4579 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BD64_4580 PF00005 ABC transporter BD64_4580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BD64_4581 PF12911 N-terminal TM domain of oligopeptide transport permease C BD64_4581 PF00528 Binding-protein-dependent transport system inner membrane component BD64_4582 PF00528 Binding-protein-dependent transport system inner membrane component BD64_4583 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BD64_4587 PF18593 CdiI immunity protein BD64_4588 PF02423 Ornithine cyclodeaminase/mu-crystallin family BD64_4589 PF05544 Proline racemase BD64_4590 PF11121 Protein of unknown function (DUF2639) BD64_4592 PF01520 N-acetylmuramoyl-L-alanine amidase BD64_4592 PF00395 S-layer homology domain BD64_4593 PF05343 M42 glutamyl aminopeptidase BD64_4596 PF00378 Enoyl-CoA hydratase/isomerase BD64_4599 PF03062 MBOAT, membrane-bound O-acyltransferase family BD64_46 PF03061 Thioesterase superfamily BD64_4600 PF03062 MBOAT, membrane-bound O-acyltransferase family BD64_4602 PF00395 S-layer homology domain BD64_4603 PF13205 Bacterial Ig-like domain BD64_4603 PF00395 S-layer homology domain BD64_4603 PF02368 Bacterial Ig-like domain (group 2) BD64_4605 PF01943 Polysaccharide biosynthesis protein BD64_4605 PF14667 Polysaccharide biosynthesis C-terminal domain BD64_4606 PF01043 SecA preprotein cross-linking domain BD64_4606 PF07516 SecA Wing and Scaffold domain BD64_4606 PF07517 SecA DEAD-like domain BD64_4610 PF00916 Sulfate permease family BD64_4610 PF01740 STAS domain BD64_4612 PF13193 AMP-binding enzyme C-terminal domain BD64_4612 PF00501 AMP-binding enzyme BD64_4613 PF04055 Radical SAM superfamily BD64_4618 PF02245 Methylpurine-DNA glycosylase (MPG) BD64_4620 PF03306 Alpha-acetolactate decarboxylase BD64_4621 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BD64_4621 PF00205 Thiamine pyrophosphate enzyme, central domain BD64_4621 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BD64_4624 PF06133 Control of competence regulator ComK, YlbF/YmcA BD64_4625 PF04286 Protein of unknown function (DUF445) BD64_4627 PF14398 YheC/D like ATP-grasp BD64_4629 PF00269 Small, acid-soluble spore proteins, alpha/beta type BD64_4630 PF00005 ABC transporter BD64_4631 PF00528 Binding-protein-dependent transport system inner membrane component BD64_4632 PF00497 Bacterial extracellular solute-binding proteins, family 3 BD64_4633 PF00005 ABC transporter BD64_4633 PF00664 ABC transporter transmembrane region BD64_4634 PF00664 ABC transporter transmembrane region BD64_4634 PF00005 ABC transporter BD64_4635 PF00664 ABC transporter transmembrane region BD64_4635 PF00005 ABC transporter BD64_4636 PF00171 Aldehyde dehydrogenase family BD64_4638 PF01177 Asp/Glu/Hydantoin racemase BD64_4639 PF13520 Amino acid permease BD64_4641 PF00199 Catalase BD64_4641 PF06628 Catalase-related immune-responsive BD64_4641 PF18011 C-terminal domain found in long catalases BD64_4642 PF01965 DJ-1/PfpI family BD64_4644 PF07690 Major Facilitator Superfamily BD64_4645 PF12793 Sugar transport-related sRNA regulator N-term BD64_4645 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BD64_4646 PF02525 Flavodoxin-like fold BD64_4648 PF01638 HxlR-like helix-turn-helix BD64_4649 PF07690 Major Facilitator Superfamily BD64_4650 PF00440 Bacterial regulatory proteins, tetR family BD64_4650 PF17934 Tetracyclin repressor-like, C-terminal domain BD64_4651 PF00893 Small Multidrug Resistance protein BD64_4652 PF00893 Small Multidrug Resistance protein BD64_4654 PF01037 Lrp/AsnC ligand binding domain BD64_4655 PF00892 EamA-like transporter family BD64_4658 PF07681 DoxX BD64_466 PF03960 ArsC family BD64_4660 PF00367 phosphotransferase system, EIIB BD64_4660 PF02378 Phosphotransferase system, EIIC BD64_4661 PF01380 SIS domain BD64_4662 PF01380 SIS domain BD64_4662 PF01418 Helix-turn-helix domain, rpiR family BD64_4664 PF00999 Sodium/hydrogen exchanger family BD64_4665 PF13520 Amino acid permease BD64_467 PF01597 Glycine cleavage H-protein BD64_4671 PF09335 SNARE associated Golgi protein BD64_4673 PF02735 Ku70/Ku80 beta-barrel domain BD64_4676 PF11007 Spore coat associated protein JA (CotJA) BD64_4677 PF12652 CotJB protein BD64_4678 PF05067 Manganese containing catalase BD64_4679 PF05525 Branched-chain amino acid transport protein BD64_468 PF01751 Toprim domain BD64_4682 PF09529 Integral membrane protein (intg_mem_TP0381) BD64_4684 PF00005 ABC transporter BD64_4685 PF12704 MacB-like periplasmic core domain BD64_4685 PF02687 FtsX-like permease family BD64_4686 PF01476 LysM domain BD64_4686 PF06725 3D domain BD64_4689 PF02378 Phosphotransferase system, EIIC BD64_469 PF00085 Thioredoxin BD64_4690 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BD64_4691 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BD64_4692 PF08279 HTH domain BD64_4692 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BD64_4692 PF05043 Mga helix-turn-helix domain BD64_4692 PF00874 PRD domain BD64_4694 PF07690 Major Facilitator Superfamily BD64_4695 PF02690 Na+/Pi-cotransporter BD64_4696 PF08240 Alcohol dehydrogenase GroES-like domain BD64_4696 PF00107 Zinc-binding dehydrogenase BD64_4697 PF03816 Cell envelope-related transcriptional attenuator domain BD64_4699 PF01925 Sulfite exporter TauE/SafE BD64_4700 PF13686 DsrE/DsrF/DrsH-like family BD64_4702 PF00581 Rhodanese-like domain BD64_4704 PF01206 Sulfurtransferase TusA BD64_4705 PF00753 Metallo-beta-lactamase superfamily BD64_4705 PF00581 Rhodanese-like domain BD64_4706 PF00581 Rhodanese-like domain BD64_4706 PF01206 Sulfurtransferase TusA BD64_4707 PF02583 Metal-sensitive transcriptional repressor BD64_4708 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BD64_4708 PF07992 Pyridine nucleotide-disulphide oxidoreductase BD64_471 PF00005 ABC transporter BD64_471 PF09383 NIL domain BD64_4713 PF04293 SpoVR like protein BD64_4714 PF00881 Nitroreductase family BD64_4717 PF03323 Bacillus/Clostridium GerA spore germination protein BD64_4719 PF03845 Spore germination protein BD64_472 PF00528 Binding-protein-dependent transport system inner membrane component BD64_4721 PF14148 YhdB-like protein BD64_4722 PF02600 Disulfide bond formation protein DsbB BD64_4723 PF00085 Thioredoxin BD64_4725 PF00356 Bacterial regulatory proteins, lacI family BD64_4725 PF13407 Periplasmic binding protein domain BD64_4726 PF02378 Phosphotransferase system, EIIC BD64_4726 PF00367 phosphotransferase system, EIIB BD64_4727 PF08244 Glycosyl hydrolases family 32 C terminal BD64_4727 PF00251 Glycosyl hydrolases family 32 N-terminal domain BD64_4728 PF00294 pfkB family carbohydrate kinase BD64_473 PF03180 NLPA lipoprotein BD64_4733 PF00860 Permease family BD64_4736 PF01047 MarR family BD64_4737 PF07690 Major Facilitator Superfamily BD64_4738 PF02702 Osmosensitive K+ channel His kinase sensor domain BD64_4739 PF02669 K+-transporting ATPase, c chain BD64_474 PF03180 NLPA lipoprotein BD64_4741 PF03814 Potassium-transporting ATPase A subunit BD64_4745 PF08543 Phosphomethylpyrimidine kinase BD64_4746 PF00899 ThiF family BD64_4747 PF05690 Thiazole biosynthesis protein ThiG BD64_4748 PF02597 ThiS family BD64_4749 PF01266 FAD dependent oxidoreductase BD64_475 PF00005 ABC transporter BD64_4750 PF02581 Thiamine monophosphate synthase BD64_4751 PF09084 NMT1/THI5 like BD64_4752 PF00528 Binding-protein-dependent transport system inner membrane component BD64_4753 PF00005 ABC transporter BD64_4754 PF03070 TENA/THI-4/PQQC family BD64_4755 PF08239 Bacterial SH3 domain BD64_4755 PF00246 Zinc carboxypeptidase BD64_4758 PF00571 CBS domain BD64_476 PF01458 Uncharacterized protein family (UPF0051) BD64_477 PF00266 Aminotransferase class-V BD64_478 PF01592 NifU-like N terminal domain BD64_4783 PF00873 AcrB/AcrD/AcrF family BD64_4785 PF00528 Binding-protein-dependent transport system inner membrane component BD64_4786 PF00528 Binding-protein-dependent transport system inner membrane component BD64_4787 PF12849 PBP superfamily domain BD64_4788 PF17910 FeoB cytosolic helical domain BD64_4788 PF04023 FeoA domain BD64_4788 PF07670 Nucleoside recognition BD64_4788 PF02421 Ferrous iron transport protein B BD64_4788 PF07664 Ferrous iron transport protein B C terminus BD64_4789 PF07664 Ferrous iron transport protein B C terminus BD64_4789 PF17910 FeoB cytosolic helical domain BD64_4789 PF02421 Ferrous iron transport protein B BD64_4789 PF07670 Nucleoside recognition BD64_479 PF01458 Uncharacterized protein family (UPF0051) BD64_4790 PF17910 FeoB cytosolic helical domain BD64_4790 PF02421 Ferrous iron transport protein B BD64_4790 PF07670 Nucleoside recognition BD64_4790 PF07664 Ferrous iron transport protein B C terminus BD64_4791 PF05504 Spore germination B3/ GerAC like, C-terminal BD64_4792 PF03845 Spore germination protein BD64_4793 PF03323 Bacillus/Clostridium GerA spore germination protein BD64_4794 PF00474 Sodium:solute symporter family BD64_4795 PF11755 Protein of unknown function (DUF3311) BD64_4796 PF01546 Peptidase family M20/M25/M40 BD64_4796 PF07687 Peptidase dimerisation domain BD64_4797 PF13529 Peptidase_C39 like family BD64_4798 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BD64_4799 PF00115 Cytochrome C and Quinol oxidase polypeptide I BD64_48 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD64_480 PF04892 VanZ like family BD64_4800 PF00510 Cytochrome c oxidase subunit III BD64_4802 PF00999 Sodium/hydrogen exchanger family BD64_4802 PF02080 TrkA-C domain BD64_4802 PF02254 TrkA-N domain BD64_4807 PF00860 Permease family BD64_4808 PF00324 Amino acid permease BD64_481 PF03551 Transcriptional regulator PadR-like family BD64_4811 PF05525 Branched-chain amino acid transport protein BD64_4812 PF00854 POT family BD64_4813 PF04203 Sortase domain BD64_4815 PF01381 Helix-turn-helix BD64_4816 PF06725 3D domain BD64_4816 PF01476 LysM domain BD64_4817 PF02743 Cache domain BD64_4817 PF00672 HAMP domain BD64_4817 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD64_4818 PF02673 Bacitracin resistance protein BacA BD64_482 PF02872 5'-nucleotidase, C-terminal domain BD64_4823 PF03372 Endonuclease/Exonuclease/phosphatase family BD64_4824 PF00882 Zinc dependent phospholipase C BD64_4826 PF08240 Alcohol dehydrogenase GroES-like domain BD64_4826 PF00107 Zinc-binding dehydrogenase BD64_4829 PF05547 Immune inhibitor A peptidase M6 BD64_483 PF08827 Domain of unknown function (DUF1805) BD64_4830 PF00923 Transaldolase/Fructose-6-phosphate aldolase BD64_4831 PF13407 Periplasmic binding protein domain BD64_4832 PF02653 Branched-chain amino acid transport system / permease component BD64_4833 PF00005 ABC transporter BD64_4834 PF05025 RbsD / FucU transport protein family BD64_4835 PF00294 pfkB family carbohydrate kinase BD64_4836 PF00356 Bacterial regulatory proteins, lacI family BD64_4837 PF07690 Major Facilitator Superfamily BD64_4838 PF07690 Major Facilitator Superfamily BD64_4839 PF01047 MarR family BD64_4840 PF07690 Major Facilitator Superfamily BD64_4841 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BD64_4841 PF00005 ABC transporter BD64_4842 PF00005 ABC transporter BD64_4842 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BD64_4843 PF00528 Binding-protein-dependent transport system inner membrane component BD64_4844 PF00528 Binding-protein-dependent transport system inner membrane component BD64_4845 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BD64_4847 PF00582 Universal stress protein family BD64_4848 PF00916 Sulfate permease family BD64_4848 PF01740 STAS domain BD64_485 PF01551 Peptidase family M23 BD64_4850 PF00486 Transcriptional regulatory protein, C terminal BD64_4850 PF00072 Response regulator receiver domain BD64_4851 PF18698 Histidine kinase sensor domain BD64_4851 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_4851 PF00672 HAMP domain BD64_4851 PF00512 His Kinase A (phospho-acceptor) domain BD64_4851 PF00989 PAS fold BD64_4852 PF01872 RibD C-terminal domain BD64_4853 PF08279 HTH domain BD64_4853 PF13280 WYL domain BD64_4858 PF00324 Amino acid permease BD64_4859 PF00528 Binding-protein-dependent transport system inner membrane component BD64_486 PF04055 Radical SAM superfamily BD64_486 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BD64_4860 PF00528 Binding-protein-dependent transport system inner membrane component BD64_4861 PF00497 Bacterial extracellular solute-binding proteins, family 3 BD64_4862 PF00005 ABC transporter BD64_4863 PF01235 Sodium:alanine symporter family BD64_4864 PF01636 Phosphotransferase enzyme family BD64_4866 PF03323 Bacillus/Clostridium GerA spore germination protein BD64_4869 PF16657 Maltogenic Amylase, C-terminal domain BD64_4869 PF00128 Alpha amylase, catalytic domain BD64_4870 PF00367 phosphotransferase system, EIIB BD64_4870 PF02378 Phosphotransferase system, EIIC BD64_4871 PF00392 Bacterial regulatory proteins, gntR family BD64_4871 PF07702 UTRA domain BD64_4872 PF13520 Amino acid permease BD64_4873 PF03707 Bacterial signalling protein N terminal repeat BD64_4873 PF00990 Diguanylate cyclase, GGDEF domain BD64_4873 PF00563 EAL domain BD64_4876 PF13091 PLD-like domain BD64_4876 PF13396 Phospholipase_D-nuclease N-terminal BD64_4877 PF07728 AAA domain (dynein-related subfamily) BD64_4878 PF00092 von Willebrand factor type A domain BD64_4879 PF13344 Haloacid dehalogenase-like hydrolase BD64_4879 PF00293 NUDIX domain BD64_4880 PF01370 NAD dependent epimerase/dehydratase family BD64_4881 PF00155 Aminotransferase class I and II BD64_4882 PF08241 Methyltransferase domain BD64_4883 PF00005 ABC transporter BD64_4884 PF01032 FecCD transport family BD64_4885 PF01032 FecCD transport family BD64_4886 PF01497 Periplasmic binding protein BD64_4887 PF00854 POT family BD64_4888 PF08141 Small acid-soluble spore protein H family BD64_4889 PF01022 Bacterial regulatory protein, arsR family BD64_4890 PF02652 L-lactate permease BD64_4891 PF00206 Lyase BD64_4891 PF10415 Fumarase C C-terminus BD64_4892 PF03471 Transporter associated domain BD64_4892 PF01595 Cyclin M transmembrane N-terminal domain BD64_4892 PF00571 CBS domain BD64_4893 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BD64_4894 PF01773 Na+ dependent nucleoside transporter N-terminus BD64_4894 PF07662 Na+ dependent nucleoside transporter C-terminus BD64_4895 PF03816 Cell envelope-related transcriptional attenuator domain BD64_4896 PF04294 VanW like protein BD64_49 PF03458 UPF0126 domain BD64_490 PF10086 YhfC intramembrane metalloprotease BD64_4900 PF01447 Thermolysin metallopeptidase, catalytic domain BD64_4900 PF02868 Thermolysin metallopeptidase, alpha-helical domain BD64_4900 PF03413 Peptidase propeptide and YPEB domain BD64_4900 PF07504 Fungalysin/Thermolysin Propeptide Motif BD64_4903 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BD64_4903 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BD64_4903 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain BD64_4904 PF00403 Heavy-metal-associated domain BD64_4905 PF01022 Bacterial regulatory protein, arsR family BD64_4906 PF13520 Amino acid permease BD64_4907 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BD64_4907 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BD64_491 PF13411 MerR HTH family regulatory protein BD64_491 PF07739 TipAS antibiotic-recognition domain BD64_4911 PF01568 Molydopterin dinucleotide binding domain BD64_4911 PF00037 4Fe-4S binding domain BD64_4911 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BD64_4911 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BD64_4911 PF00384 Molybdopterin oxidoreductase BD64_4912 PF02634 FdhD/NarQ family BD64_4913 PF00583 Acetyltransferase (GNAT) family BD64_4913 PF13508 Acetyltransferase (GNAT) domain BD64_4915 PF00486 Transcriptional regulatory protein, C terminal BD64_4915 PF00072 Response regulator receiver domain BD64_4916 PF18698 Histidine kinase sensor domain BD64_4916 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_4916 PF00672 HAMP domain BD64_4916 PF00989 PAS fold BD64_4916 PF00512 His Kinase A (phospho-acceptor) domain BD64_4918 PF00155 Aminotransferase class I and II BD64_4918 PF00392 Bacterial regulatory proteins, gntR family BD64_4919 PF00892 EamA-like transporter family BD64_492 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BD64_4921 PF03949 Malic enzyme, NAD binding domain BD64_4921 PF00390 Malic enzyme, N-terminal domain BD64_4922 PF03390 2-hydroxycarboxylate transporter family BD64_4923 PF00072 Response regulator receiver domain BD64_4924 PF00989 PAS fold BD64_4924 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_4924 PF17203 Single cache domain 3 BD64_4924 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BD64_4925 PF00672 HAMP domain BD64_4925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD64_4925 PF02743 Cache domain BD64_4926 PF13529 Peptidase_C39 like family BD64_4928 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_4928 PF00512 His Kinase A (phospho-acceptor) domain BD64_4929 PF00486 Transcriptional regulatory protein, C terminal BD64_4929 PF00072 Response regulator receiver domain BD64_493 PF06265 Protein of unknown function (DUF1027) BD64_4930 PF00149 Calcineurin-like phosphoesterase BD64_4931 PF13416 Bacterial extracellular solute-binding protein BD64_4932 PF00528 Binding-protein-dependent transport system inner membrane component BD64_4933 PF00528 Binding-protein-dependent transport system inner membrane component BD64_4934 PF17912 MalK OB fold domain BD64_4934 PF00005 ABC transporter BD64_4935 PF04309 Glycerol-3-phosphate responsive antiterminator BD64_4939 PF03600 Citrate transporter BD64_4940 PF12431 Transcriptional regulator BD64_4940 PF08279 HTH domain BD64_4940 PF00072 Response regulator receiver domain BD64_4941 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_4941 PF00989 PAS fold BD64_4941 PF17203 Single cache domain 3 BD64_4941 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BD64_4942 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD64_4942 PF02743 Cache domain BD64_4942 PF00672 HAMP domain BD64_4943 PF01145 SPFH domain / Band 7 family BD64_4943 PF15975 Flotillin BD64_4945 PF01752 Collagenase BD64_4945 PF18496 Collagenase G catalytic helper subdomain BD64_4945 PF08453 Peptidase family M9 N-terminal BD64_4946 PF02028 BCCT, betaine/carnitine/choline family transporter BD64_4949 PF04285 Protein of unknown function (DUF444) BD64_4950 PF08298 PrkA AAA domain BD64_4950 PF06798 PrkA serine protein kinase C-terminal domain BD64_4952 PF03707 Bacterial signalling protein N terminal repeat BD64_4952 PF00563 EAL domain BD64_4952 PF00990 Diguanylate cyclase, GGDEF domain BD64_4953 PF00588 SpoU rRNA Methylase family BD64_4954 PF12671 Putative amidase domain BD64_4955 PF08331 Domain of unknown function (DUF1730) BD64_4957 PF13462 Thioredoxin BD64_4958 PF00912 Transglycosylase BD64_4958 PF00905 Penicillin binding protein transpeptidase domain BD64_4959 PF00293 NUDIX domain BD64_4959 PF13344 Haloacid dehalogenase-like hydrolase BD64_496 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BD64_4960 PF01709 Transcriptional regulator BD64_497 PF01934 Protein of unknown function DUF86 BD64_4982 PF11023 Zinc-ribbon containing domain BD64_4983 PF01475 Ferric uptake regulator family BD64_4984 PF00578 AhpC/TSA family BD64_4985 PF07885 Ion channel BD64_4988 PF00005 ABC transporter BD64_4989 PF00202 Aminotransferase class-III BD64_499 PF13344 Haloacid dehalogenase-like hydrolase BD64_4990 PF04898 Glutamate synthase central domain BD64_4990 PF00310 Glutamine amidotransferases class-II BD64_4990 PF01493 GXGXG motif BD64_4990 PF01645 Conserved region in glutamate synthase BD64_4991 PF06081 Aromatic acid exporter family member 1 BD64_4992 PF00005 ABC transporter BD64_4992 PF00664 ABC transporter transmembrane region BD64_4993 PF04167 Protein of unknown function (DUF402) BD64_4994 PF14182 YgaB-like protein BD64_4995 PF04259 Small, acid-soluble spore protein, gamma-type BD64_4997 PF14815 NUDIX domain BD64_4997 PF00730 HhH-GPD superfamily base excision DNA repair protein BD64_4998 PF04307 LexA-binding, inner membrane-associated putative hydrolase BD64_4999 PF14043 WVELL protein BD64_500 PF02525 Flavodoxin-like fold BD64_5000 PF08176 Small acid-soluble spore protein K family BD64_5003 PF02631 RecX family BD64_5004 PF01370 NAD dependent epimerase/dehydratase family BD64_5004 PF08338 Domain of unknown function (DUF1731) BD64_5005 PF01979 Amidohydrolase family BD64_5008 PF04101 Glycosyltransferase family 28 C-terminal domain BD64_5008 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase BD64_5009 PF04055 Radical SAM superfamily BD64_5010 PF02901 Pyruvate formate lyase-like BD64_5010 PF01228 Glycine radical BD64_5011 PF00535 Glycosyl transferase family 2 BD64_5012 PF02911 Formyl transferase, C-terminal domain BD64_5012 PF00551 Formyl transferase BD64_5012 PF01370 NAD dependent epimerase/dehydratase family BD64_5013 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BD64_5013 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BD64_5013 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BD64_5014 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BD64_5014 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BD64_5014 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BD64_5015 PF00535 Glycosyl transferase family 2 BD64_5018 PF00144 Beta-lactamase BD64_5019 PF00367 phosphotransferase system, EIIB BD64_5019 PF02378 Phosphotransferase system, EIIC BD64_502 PF04608 Phosphatidylglycerophosphatase A BD64_5020 PF04960 Glutaminase BD64_5025 PF01546 Peptidase family M20/M25/M40 BD64_5025 PF07687 Peptidase dimerisation domain BD64_5026 PF00324 Amino acid permease BD64_5028 PF02954 Bacterial regulatory protein, Fis family BD64_5028 PF13426 PAS domain BD64_5028 PF00158 Sigma-54 interaction domain BD64_5030 PF01416 tRNA pseudouridine synthase BD64_505 PF01106 NifU-like domain BD64_506 PF07315 Protein of unknown function (DUF1462) BD64_5077 PF07319 Primosomal protein DnaI N-terminus BD64_5077 PF01695 IstB-like ATP binding protein BD64_5084 PF01381 Helix-turn-helix BD64_5088 PF00589 Phage integrase family BD64_5088 PF14659 Phage integrase, N-terminal SAM-like domain BD64_5089 PF01938 TRAM domain BD64_5089 PF05958 tRNA (Uracil-5-)-methyltransferase BD64_5090 PF00730 HhH-GPD superfamily base excision DNA repair protein BD64_5092 PF01522 Polysaccharide deacetylase BD64_5093 PF05683 Fumarase C-terminus BD64_5093 PF05681 Fumarate hydratase (Fumerase) BD64_5095 PF04055 Radical SAM superfamily BD64_5095 PF08756 YfkB-like domain BD64_5096 PF14167 YfkD-like protein BD64_5097 PF01699 Sodium/calcium exchanger protein BD64_5098 PF16242 Pyridoxamine 5'-phosphate oxidase like BD64_5101 PF09335 SNARE associated Golgi protein BD64_5103 PF10502 Signal peptidase, peptidase S26 BD64_5104 PF10502 Signal peptidase, peptidase S26 BD64_5106 PF00892 EamA-like transporter family BD64_5108 PF03631 Virulence factor BrkB BD64_5110 PF01451 Low molecular weight phosphotyrosine protein phosphatase BD64_5111 PF06569 Protein of unknown function (DUF1128) BD64_5112 PF00689 Cation transporting ATPase, C-terminus BD64_5112 PF00690 Cation transporter/ATPase, N-terminus BD64_5113 PF05816 Toxic anion resistance protein (TelA) BD64_5114 PF14266 Putative component of 'biosynthetic module' BD64_5115 PF03741 Integral membrane protein TerC family BD64_5116 PF02342 TerD domain BD64_5117 PF02342 TerD domain BD64_5118 PF02342 TerD domain BD64_5119 PF00480 ROK family BD64_5121 PF09180 Prolyl-tRNA synthetase, C-terminal BD64_5121 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BD64_5121 PF03129 Anticodon binding domain BD64_5124 PF11700 Vacuole effluxer Atg22 like BD64_5128 PF08360 QacR-like protein, C-terminal region BD64_5128 PF00440 Bacterial regulatory proteins, tetR family BD64_5132 PF00041 Fibronectin type III domain BD64_5132 PF00704 Glycosyl hydrolases family 18 BD64_5133 PF12848 ABC transporter BD64_5133 PF00005 ABC transporter BD64_5134 PF00005 ABC transporter BD64_5136 PF00528 Binding-protein-dependent transport system inner membrane component BD64_5137 PF01910 Thiamine-binding protein BD64_5138 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD64_5138 PF00672 HAMP domain BD64_5139 PF03605 Anaerobic c4-dicarboxylate membrane transporter BD64_514 PF03831 PhnA domain BD64_514 PF08274 PhnA Zinc-Ribbon BD64_5140 PF02581 Thiamine monophosphate synthase BD64_5141 PF02110 Hydroxyethylthiazole kinase family BD64_5142 PF01751 Toprim domain BD64_5142 PF01131 DNA topoisomerase BD64_5143 PF01061 ABC-2 type transporter BD64_5144 PF03372 Endonuclease/Exonuclease/phosphatase family BD64_5145 PF02378 Phosphotransferase system, EIIC BD64_5145 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BD64_5145 PF00367 phosphotransferase system, EIIB BD64_5146 PF16657 Maltogenic Amylase, C-terminal domain BD64_5146 PF00128 Alpha amylase, catalytic domain BD64_5147 PF12729 Four helix bundle sensory module for signal transduction BD64_5147 PF00672 HAMP domain BD64_5147 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD64_5148 PF00672 HAMP domain BD64_5148 PF12729 Four helix bundle sensory module for signal transduction BD64_5148 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD64_5149 PF00005 ABC transporter BD64_515 PF03649 Uncharacterised protein family (UPF0014) BD64_5150 PF00497 Bacterial extracellular solute-binding proteins, family 3 BD64_5151 PF00528 Binding-protein-dependent transport system inner membrane component BD64_5153 PF01266 FAD dependent oxidoreductase BD64_5153 PF00355 Rieske [2Fe-2S] domain BD64_5154 PF07690 Major Facilitator Superfamily BD64_5155 PF10127 RNA repair pathway DNA polymerase beta family BD64_5159 PF13188 PAS domain BD64_5159 PF00989 PAS fold BD64_5159 PF13426 PAS domain BD64_5159 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_5159 PF00512 His Kinase A (phospho-acceptor) domain BD64_516 PF09383 NIL domain BD64_516 PF00005 ABC transporter BD64_5165 PF12728 Helix-turn-helix domain BD64_5167 PF07992 Pyridine nucleotide-disulphide oxidoreductase BD64_5168 PF01497 Periplasmic binding protein BD64_5169 PF01032 FecCD transport family BD64_517 PF07992 Pyridine nucleotide-disulphide oxidoreductase BD64_5170 PF01032 FecCD transport family BD64_5171 PF00596 Class II Aldolase and Adducin N-terminal domain BD64_5173 PF01636 Phosphotransferase enzyme family BD64_5174 PF00578 AhpC/TSA family BD64_5176 PF07992 Pyridine nucleotide-disulphide oxidoreductase BD64_5176 PF13192 Thioredoxin domain BD64_5177 PF01546 Peptidase family M20/M25/M40 BD64_5177 PF07687 Peptidase dimerisation domain BD64_518 PF07293 Protein of unknown function (DUF1450) BD64_5180 PF13378 Enolase C-terminal domain-like BD64_5180 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BD64_5183 PF07308 Protein of unknown function (DUF1456) BD64_5185 PF01207 Dihydrouridine synthase (Dus) BD64_5186 PF05958 tRNA (Uracil-5-)-methyltransferase BD64_5186 PF01938 TRAM domain BD64_5186 PF02475 Met-10+ like-protein BD64_5187 PF07670 Nucleoside recognition BD64_5187 PF07662 Na+ dependent nucleoside transporter C-terminus BD64_5187 PF01773 Na+ dependent nucleoside transporter N-terminus BD64_519 PF01678 Diaminopimelate epimerase BD64_5190 PF02073 Thermophilic metalloprotease (M29) BD64_5191 PF00893 Small Multidrug Resistance protein BD64_5192 PF00171 Aldehyde dehydrogenase family BD64_5193 PF00158 Sigma-54 interaction domain BD64_5194 PF00202 Aminotransferase class-III BD64_5195 PF13419 Haloacid dehalogenase-like hydrolase BD64_5196 PF00781 Diacylglycerol kinase catalytic domain BD64_5197 PF02934 GatB/GatE catalytic domain BD64_5197 PF02637 GatB domain BD64_5198 PF01425 Amidase BD64_5199 PF02686 Glu-tRNAGln amidotransferase C subunit BD64_52 PF03808 Glycosyl transferase WecB/TagA/CpsF family BD64_520 PF01521 Iron-sulphur cluster biosynthesis BD64_5201 PF01047 MarR family BD64_5202 PF17886 HSP20-like domain found in ArsA BD64_5202 PF02374 Anion-transporting ATPase BD64_5203 PF02374 Anion-transporting ATPase BD64_5203 PF17886 HSP20-like domain found in ArsA BD64_5206 PF03180 NLPA lipoprotein BD64_5207 PF00528 Binding-protein-dependent transport system inner membrane component BD64_5208 PF00005 ABC transporter BD64_5208 PF09383 NIL domain BD64_5209 PF00857 Isochorismatase family BD64_5211 PF00171 Aldehyde dehydrogenase family BD64_5212 PF01925 Sulfite exporter TauE/SafE BD64_5213 PF07537 CamS sex pheromone cAM373 precursor BD64_5214 PF12826 Helix-hairpin-helix motif BD64_5214 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BD64_5214 PF03120 NAD-dependent DNA ligase OB-fold domain BD64_5214 PF00533 BRCA1 C Terminus (BRCT) domain BD64_5214 PF01653 NAD-dependent DNA ligase adenylation domain BD64_5215 PF13361 UvrD-like helicase C-terminal domain BD64_5215 PF00580 UvrD/REP helicase N-terminal domain BD64_5216 PF01884 PcrB family BD64_5220 PF02844 Phosphoribosylglycinamide synthetase, N domain BD64_5220 PF02843 Phosphoribosylglycinamide synthetase, C domain BD64_5220 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BD64_5221 PF02142 MGS-like domain BD64_5221 PF01808 AICARFT/IMPCHase bienzyme BD64_5222 PF00551 Formyl transferase BD64_5223 PF02769 AIR synthase related protein, C-terminal domain BD64_5223 PF00586 AIR synthase related protein, N-terminal domain BD64_5224 PF00156 Phosphoribosyl transferase domain BD64_5225 PF00586 AIR synthase related protein, N-terminal domain BD64_5225 PF02769 AIR synthase related protein, C-terminal domain BD64_5225 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BD64_5227 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase BD64_5228 PF01259 SAICAR synthetase BD64_5229 PF10397 Adenylosuccinate lyase C-terminus BD64_5229 PF00206 Lyase BD64_523 PF04463 Protein of unknown function (DUF523) BD64_5230 PF02222 ATP-grasp domain BD64_5230 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BD64_5231 PF00731 AIR carboxylase BD64_5238 PF00535 Glycosyl transferase family 2 BD64_5244 PF08241 Methyltransferase domain BD64_5247 PF05045 Rhamnan synthesis protein F BD64_5247 PF14307 Glycosyltransferase WbsX BD64_5252 PF16736 Single Cache-like BD64_5252 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_5252 PF00512 His Kinase A (phospho-acceptor) domain BD64_5252 PF00989 PAS fold BD64_5253 PF00486 Transcriptional regulatory protein, C terminal BD64_5253 PF00072 Response regulator receiver domain BD64_5254 PF00860 Permease family BD64_5255 PF00117 Glutamine amidotransferase class-I BD64_5255 PF02540 NAD synthase BD64_5255 PF00958 GMP synthase C terminal domain BD64_5256 PF00118 TCP-1/cpn60 chaperonin family BD64_5257 PF00166 Chaperonin 10 Kd subunit BD64_5258 PF02517 CPBP intramembrane metalloprotease BD64_526 PF06445 GyrI-like small molecule binding domain BD64_5260 PF02629 CoA binding domain BD64_5260 PF06971 Putative DNA-binding protein N-terminus BD64_5261 PF12848 ABC transporter BD64_5261 PF16326 ABC transporter C-terminal domain BD64_5261 PF00005 ABC transporter BD64_5262 PF00814 Glycoprotease family BD64_5263 PF00583 Acetyltransferase (GNAT) family BD64_5264 PF00814 Glycoprotease family BD64_5265 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BD64_528 PF07992 Pyridine nucleotide-disulphide oxidoreductase BD64_5282 PF17283 SprT-like zinc ribbon domain BD64_5282 PF10263 SprT-like family BD64_5283 PF00575 S1 RNA binding domain BD64_5283 PF09371 Tex-like protein N-terminal domain BD64_5283 PF16921 Tex protein YqgF-like domain BD64_5283 PF17674 HHH domain BD64_5284 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system BD64_5285 PF01402 Ribbon-helix-helix protein, copG family BD64_5286 PF00842 Alanine racemase, C-terminal domain BD64_5286 PF01168 Alanine racemase, N-terminal domain BD64_5288 PF01648 4'-phosphopantetheinyl transferase superfamily BD64_5289 PF03851 UV-endonuclease UvdE BD64_529 PF07992 Pyridine nucleotide-disulphide oxidoreductase BD64_5290 PF01694 Rhomboid family BD64_5291 PF00271 Helicase conserved C-terminal domain BD64_5291 PF00270 DEAD/DEAH box helicase BD64_5292 PF01225 Mur ligase family, catalytic domain BD64_5292 PF02875 Mur ligase family, glutamate ligase domain BD64_5292 PF08245 Mur ligase middle domain BD64_5293 PF07478 D-ala D-ala ligase C-terminus BD64_5293 PF01820 D-ala D-ala ligase N-terminus BD64_5294 PF07478 D-ala D-ala ligase C-terminus BD64_5294 PF01820 D-ala D-ala ligase N-terminus BD64_5295 PF07690 Major Facilitator Superfamily BD64_5297 PF01557 Fumarylacetoacetate (FAA) hydrolase family BD64_5298 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BD64_53 PF07690 Major Facilitator Superfamily BD64_530 PF00293 NUDIX domain BD64_530 PF13344 Haloacid dehalogenase-like hydrolase BD64_5306 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BD64_5306 PF00005 ABC transporter BD64_5307 PF00005 ABC transporter BD64_5307 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BD64_5309 PF00528 Binding-protein-dependent transport system inner membrane component BD64_5310 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BD64_5313 PF12848 ABC transporter BD64_5313 PF00005 ABC transporter BD64_5313 PF16326 ABC transporter C-terminal domain BD64_5317 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) BD64_5318 PF01026 TatD related DNase BD64_532 PF06725 3D domain BD64_5321 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BD64_5321 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BD64_5323 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BD64_5323 PF00356 Bacterial regulatory proteins, lacI family BD64_5325 PF01553 Acyltransferase BD64_5327 PF14142 YrzO-like protein BD64_5328 PF00892 EamA-like transporter family BD64_5329 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BD64_5329 PF03466 LysR substrate binding domain BD64_533 PF00883 Cytosol aminopeptidase family, catalytic domain BD64_533 PF02789 Cytosol aminopeptidase family, N-terminal domain BD64_5332 PF12727 PBP superfamily domain BD64_5332 PF12728 Helix-turn-helix domain BD64_5335 PF00528 Binding-protein-dependent transport system inner membrane component BD64_5336 PF06800 Sugar transport protein BD64_5337 PF04973 Nicotinamide mononucleotide transporter BD64_5338 PF14748 Pyrroline-5-carboxylate reductase dimerisation BD64_5338 PF03807 NADP oxidoreductase coenzyme F420-dependent BD64_5339 PF00248 Aldo/keto reductase family BD64_534 PF10372 Bacterial membrane-spanning protein N-terminus BD64_534 PF02457 DisA bacterial checkpoint controller nucleotide-binding BD64_5340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BD64_5341 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BD64_5344 PF12833 Helix-turn-helix domain BD64_5346 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BD64_5347 PF00005 ABC transporter BD64_5347 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BD64_5348 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BD64_5348 PF00005 ABC transporter BD64_5349 PF00528 Binding-protein-dependent transport system inner membrane component BD64_5349 PF12911 N-terminal TM domain of oligopeptide transport permease C BD64_535 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BD64_535 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BD64_535 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BD64_535 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BD64_5350 PF00528 Binding-protein-dependent transport system inner membrane component BD64_5353 PF07690 Major Facilitator Superfamily BD64_5355 PF07690 Major Facilitator Superfamily BD64_5356 PF01565 FAD binding domain BD64_5359 PF03180 NLPA lipoprotein BD64_536 PF00483 Nucleotidyl transferase BD64_5360 PF09383 NIL domain BD64_5360 PF00005 ABC transporter BD64_5361 PF00528 Binding-protein-dependent transport system inner membrane component BD64_5370 PF07676 WD40-like Beta Propeller Repeat BD64_5370 PF00326 Prolyl oligopeptidase family BD64_5371 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BD64_5371 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BD64_5372 PF02447 GntP family permease BD64_5373 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BD64_5373 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BD64_5374 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BD64_5374 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BD64_5375 PF07729 FCD domain BD64_5375 PF00392 Bacterial regulatory proteins, gntR family BD64_5376 PF00561 alpha/beta hydrolase fold BD64_5377 PF01380 SIS domain BD64_5378 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BD64_5378 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BD64_5378 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BD64_5378 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BD64_5379 PF07949 YbbR-like protein BD64_538 PF02632 BioY family BD64_5380 PF02457 DisA bacterial checkpoint controller nucleotide-binding BD64_5381 PF00491 Arginase family BD64_5382 PF02595 Glycerate kinase family BD64_5383 PF02595 Glycerate kinase family BD64_5398 PF01522 Polysaccharide deacetylase BD64_5399 PF14089 KinB-signalling pathway activation in sporulation BD64_54 PF00072 Response regulator receiver domain BD64_54 PF04397 LytTr DNA-binding domain BD64_540 PF03061 Thioesterase superfamily BD64_5400 PF17898 Spore germination GerD central core domain BD64_5401 PF10609 NUBPL iron-transfer P-loop NTPase BD64_5402 PF01520 N-acetylmuramoyl-L-alanine amidase BD64_5404 PF00380 Ribosomal protein S9/S16 BD64_5405 PF00572 Ribosomal protein L13 BD64_5406 PF01416 tRNA pseudouridine synthase BD64_5407 PF02361 Cobalt transport protein BD64_5408 PF00005 ABC transporter BD64_5409 PF00005 ABC transporter BD64_541 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BD64_541 PF03129 Anticodon binding domain BD64_5410 PF01196 Ribosomal protein L17 BD64_5411 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BD64_5411 PF01000 RNA polymerase Rpb3/RpoA insert domain BD64_5411 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BD64_5412 PF00411 Ribosomal protein S11 BD64_5413 PF00416 Ribosomal protein S13/S18 BD64_5414 PF00444 Ribosomal protein L36 BD64_5415 PF01176 Translation initiation factor 1A / IF-1 BD64_5416 PF00557 Metallopeptidase family M24 BD64_5417 PF05191 Adenylate kinase, active site lid BD64_5418 PF00344 SecY translocase BD64_5419 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BD64_5420 PF00327 Ribosomal protein L30p/L7e BD64_5421 PF00333 Ribosomal protein S5, N-terminal domain BD64_5421 PF03719 Ribosomal protein S5, C-terminal domain BD64_5422 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BD64_5423 PF00347 Ribosomal protein L6 BD64_5424 PF00410 Ribosomal protein S8 BD64_5425 PF00253 Ribosomal protein S14p/S29e BD64_5426 PF00673 ribosomal L5P family C-terminus BD64_5426 PF00281 Ribosomal protein L5 BD64_5427 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BD64_5427 PF00467 KOW motif BD64_5428 PF00238 Ribosomal protein L14p/L23e BD64_5429 PF00366 Ribosomal protein S17 BD64_5430 PF00831 Ribosomal L29 protein BD64_5431 PF00252 Ribosomal protein L16p/L10e BD64_5432 PF00189 Ribosomal protein S3, C-terminal domain BD64_5432 PF07650 KH domain BD64_5433 PF00237 Ribosomal protein L22p/L17e BD64_5434 PF00203 Ribosomal protein S19 BD64_5435 PF03947 Ribosomal Proteins L2, C-terminal domain BD64_5435 PF00181 Ribosomal Proteins L2, RNA binding domain BD64_5436 PF00276 Ribosomal protein L23 BD64_5437 PF00573 Ribosomal protein L4/L1 family BD64_5438 PF00297 Ribosomal protein L3 BD64_5439 PF00338 Ribosomal protein S10p/S20e BD64_544 PF03600 Citrate transporter BD64_5440 PF00009 Elongation factor Tu GTP binding domain BD64_5440 PF03144 Elongation factor Tu domain 2 BD64_5440 PF03143 Elongation factor Tu C-terminal domain BD64_5441 PF00009 Elongation factor Tu GTP binding domain BD64_5441 PF14492 Elongation Factor G, domain II BD64_5441 PF00679 Elongation factor G C-terminus BD64_5441 PF03144 Elongation factor Tu domain 2 BD64_5441 PF03764 Elongation factor G, domain IV BD64_5442 PF00177 Ribosomal protein S7p/S5e BD64_5443 PF00164 Ribosomal protein S12/S23 BD64_5444 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BD64_5445 PF04983 RNA polymerase Rpb1, domain 3 BD64_5445 PF05000 RNA polymerase Rpb1, domain 4 BD64_5445 PF04998 RNA polymerase Rpb1, domain 5 BD64_5445 PF00623 RNA polymerase Rpb1, domain 2 BD64_5445 PF04997 RNA polymerase Rpb1, domain 1 BD64_5446 PF04563 RNA polymerase beta subunit BD64_5446 PF04561 RNA polymerase Rpb2, domain 2 BD64_5446 PF00562 RNA polymerase Rpb2, domain 6 BD64_5446 PF04565 RNA polymerase Rpb2, domain 3 BD64_5446 PF04560 RNA polymerase Rpb2, domain 7 BD64_5446 PF10385 RNA polymerase beta subunit external 1 domain BD64_5447 PF05175 Methyltransferase small domain BD64_5448 PF00542 Ribosomal protein L7/L12 C-terminal domain BD64_5448 PF16320 Ribosomal protein L7/L12 dimerisation domain BD64_5449 PF00466 Ribosomal protein L10 BD64_545 PF00929 Exonuclease BD64_5450 PF00687 Ribosomal protein L1p/L10e family BD64_5451 PF03946 Ribosomal protein L11, N-terminal domain BD64_5451 PF00298 Ribosomal protein L11, RNA binding domain BD64_5452 PF02357 Transcription termination factor nusG BD64_5452 PF00467 KOW motif BD64_5453 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BD64_5454 PF08281 Sigma-70, region 4 BD64_5454 PF04542 Sigma-70 region 2 BD64_5455 PF05991 YacP-like NYN domain BD64_5456 PF08032 RNA 2'-O ribose methyltransferase substrate binding BD64_5456 PF00588 SpoU rRNA Methylase family BD64_5457 PF00636 Ribonuclease III domain BD64_5458 PF01406 tRNA synthetases class I (C) catalytic domain BD64_5458 PF09190 DALR domain BD64_5459 PF06426 Serine acetyltransferase, N-terminal BD64_5459 PF00132 Bacterial transferase hexapeptide (six repeats) BD64_546 PF08810 Kinase associated protein B BD64_5460 PF00749 tRNA synthetases class I (E and Q), catalytic domain BD64_5461 PF02542 YgbB family BD64_5462 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BD64_5464 PF02457 DisA bacterial checkpoint controller nucleotide-binding BD64_5464 PF10635 DisA bacterial checkpoint controller linker region BD64_5465 PF18073 Rubredoxin metal binding domain BD64_5466 PF10431 C-terminal, D2-small domain, of ClpB protein BD64_5466 PF02861 Clp amino terminal domain, pathogenicity island component BD64_5466 PF17871 AAA lid domain BD64_5466 PF07724 AAA domain (Cdc48 subfamily) BD64_5466 PF00004 ATPase family associated with various cellular activities (AAA) BD64_5467 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain BD64_5468 PF02151 UvrB/uvrC motif BD64_5469 PF17727 CtsR C-terminal dimerization domain BD64_5469 PF05848 CtsR N-terminal HTH domain BD64_5474 PF01336 OB-fold nucleic acid binding domain BD64_5474 PF00152 tRNA synthetases class II (D, K and N) BD64_5475 PF01207 Dihydrouridine synthase (Dus) BD64_5476 PF01381 Helix-turn-helix BD64_5477 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BD64_5478 PF02152 Dihydroneopterin aldolase BD64_5479 PF00809 Pterin binding enzyme BD64_5480 PF01063 Amino-transferase class IV BD64_5481 PF00117 Glutamine amidotransferase class-I BD64_5482 PF00425 chorismate binding enzyme BD64_5482 PF04715 Anthranilate synthase component I, N terminal region BD64_5483 PF00291 Pyridoxal-phosphate dependent enzyme BD64_5484 PF01430 Hsp33 protein BD64_5485 PF03309 Type III pantothenate kinase BD64_5486 PF00004 ATPase family associated with various cellular activities (AAA) BD64_5486 PF01434 Peptidase family M41 BD64_5486 PF06480 FtsH Extracellular BD64_5486 PF17862 AAA+ lid domain BD64_5488 PF09179 TilS substrate binding domain BD64_5488 PF11734 TilS substrate C-terminal domain BD64_5488 PF01171 PP-loop family BD64_5489 PF07228 Stage II sporulation protein E (SpoIIE) BD64_549 PF00155 Aminotransferase class I and II BD64_5492 PF00575 S1 RNA binding domain BD64_5494 PF09578 Spore cortex protein YabQ (Spore_YabQ) BD64_5495 PF07873 YabP family BD64_5496 PF01479 S4 domain BD64_5497 PF03819 MazG nucleotide pyrophosphohydrolase domain BD64_5497 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BD64_5498 PF01943 Polysaccharide biosynthesis protein BD64_5498 PF14667 Polysaccharide biosynthesis C-terminal domain BD64_5499 PF15714 Stage V sporulation protein T C-terminal, transcription factor BD64_5499 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BD64_55 PF02554 Carbon starvation protein CstA BD64_55 PF13722 5TM C-terminal transporter carbon starvation CstA BD64_5500 PF00271 Helicase conserved C-terminal domain BD64_5500 PF00270 DEAD/DEAH box helicase BD64_5500 PF02559 CarD-like/TRCF domain BD64_5500 PF03461 TRCF domain BD64_5500 PF17757 UvrB interaction domain BD64_5502 PF01195 Peptidyl-tRNA hydrolase BD64_5503 PF14572 Phosphoribosyl synthetase-associated domain BD64_5503 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BD64_5504 PF00483 Nucleotidyl transferase BD64_5504 PF00132 Bacterial transferase hexapeptide (six repeats) BD64_5505 PF04026 SpoVG BD64_5506 PF01042 Endoribonuclease L-PSP BD64_5507 PF09182 Bacterial purine repressor, N-terminal BD64_5507 PF00156 Phosphoribosyl transferase domain BD64_5508 PF08544 GHMP kinases C terminal BD64_5508 PF00288 GHMP kinases N terminal domain BD64_5509 PF00269 Small, acid-soluble spore proteins, alpha/beta type BD64_551 PF08386 TAP-like protein BD64_551 PF00561 alpha/beta hydrolase fold BD64_5510 PF06257 Biofilm formation stimulator VEG BD64_5511 PF05582 YabG peptidase U57 BD64_5512 PF00398 Ribosomal RNA adenine dimethylase BD64_5513 PF13662 Toprim domain BD64_5513 PF13331 Domain of unknown function (DUF4093) BD64_5514 PF01026 TatD related DNase BD64_5515 PF01588 Putative tRNA binding domain BD64_5515 PF08264 Anticodon-binding domain of tRNA BD64_5515 PF09334 tRNA synthetases class I (M) BD64_5516 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BD64_5516 PF18277 AbrB C-terminal domain BD64_5517 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BD64_5518 PF01541 GIY-YIG catalytic domain BD64_5519 PF05175 Methyltransferase small domain BD64_552 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BD64_552 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BD64_5520 PF06156 Initiation control protein YabA BD64_5521 PF04468 PSP1 C-terminal conserved region BD64_5522 PF09115 DNA polymerase III, delta subunit, C terminal BD64_5523 PF02223 Thymidylate kinase BD64_5524 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BD64_5524 PF01276 Orn/Lys/Arg decarboxylase, major domain BD64_553 PF01037 Lrp/AsnC ligand binding domain BD64_5532 PF07441 SigmaK-factor processing regulatory protein BofA BD64_5533 PF10704 Protein of unknown function (DUF2508) BD64_5534 PF13662 Toprim domain BD64_5534 PF02132 RecR protein BD64_5535 PF02575 YbaB/EbfC DNA-binding family BD64_5536 PF12169 DNA polymerase III subunits gamma and tau domain III BD64_5537 PF14437 MafB19-like deaminase BD64_5538 PF00857 Isochorismatase family BD64_5539 PF01712 Deoxynucleoside kinase BD64_554 PF00155 Aminotransferase class I and II BD64_5540 PF01712 Deoxynucleoside kinase BD64_5543 PF02403 Seryl-tRNA synthetase N-terminal domain BD64_5543 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BD64_5544 PF01174 SNO glutamine amidotransferase family BD64_5545 PF01680 SOR/SNZ family BD64_5546 PF00768 D-alanyl-D-alanine carboxypeptidase BD64_5546 PF07943 Penicillin-binding protein 5, C-terminal domain BD64_5547 PF00571 CBS domain BD64_5547 PF00478 IMP dehydrogenase / GMP reductase domain BD64_5548 PF14175 YaaC-like Protein BD64_555 PF00575 S1 RNA binding domain BD64_5555 PF03989 DNA gyrase C-terminal domain, beta-propeller BD64_5555 PF00521 DNA gyrase/topoisomerase IV, subunit A BD64_5556 PF00204 DNA gyrase B BD64_5556 PF01751 Toprim domain BD64_5556 PF00986 DNA gyrase B subunit, carboxyl terminus BD64_5556 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_5557 PF02463 RecF/RecN/SMC N terminal domain BD64_5559 PF00712 DNA polymerase III beta subunit, N-terminal domain BD64_5559 PF02767 DNA polymerase III beta subunit, central domain BD64_5559 PF02768 DNA polymerase III beta subunit, C-terminal domain BD64_556 PF04070 Domain of unknown function (DUF378) BD64_5560 PF08299 Bacterial dnaA protein helix-turn-helix BD64_5560 PF00308 Bacterial dnaA protein BD64_5560 PF11638 DnaA N-terminal domain BD64_5561 PF00468 Ribosomal protein L34 BD64_5562 PF00825 Ribonuclease P BD64_5563 PF02096 60Kd inner membrane protein BD64_5564 PF14804 Jag N-terminus BD64_5564 PF01424 R3H domain BD64_5565 PF01926 50S ribosome-binding GTPase BD64_5565 PF12631 MnmE helical domain BD64_5565 PF10396 GTP-binding protein TrmE N-terminus BD64_5566 PF01134 Glucose inhibited division protein A BD64_5566 PF13932 GidA associated domain BD64_5567 PF02527 rRNA small subunit methyltransferase G BD64_5568 PF02195 ParB-like nuclease domain BD64_5568 PF17762 HTH domain found in ParB protein BD64_5569 PF13614 AAA domain BD64_557 PF00342 Phosphoglucose isomerase BD64_5570 PF02195 ParB-like nuclease domain BD64_5570 PF17762 HTH domain found in ParB protein BD64_5571 PF06866 Protein of unknown function (DUF1256) BD64_5572 PF00924 Mechanosensitive ion channel BD64_5573 PF06107 Bacterial protein of unknown function (DUF951) BD64_5574 PF06071 Protein of unknown function (DUF933) BD64_5574 PF01926 50S ribosome-binding GTPase BD64_5575 PF01250 Ribosomal protein S6 BD64_5576 PF00436 Single-strand binding protein family BD64_5577 PF01084 Ribosomal protein S18 BD64_5578 PF09991 Predicted membrane protein (DUF2232) BD64_5579 PF02272 DHHA1 domain BD64_5579 PF01368 DHH family BD64_558 PF07885 Ion channel BD64_558 PF02254 TrkA-N domain BD64_5580 PF01281 Ribosomal protein L9, N-terminal domain BD64_5580 PF03948 Ribosomal protein L9, C-terminal domain BD64_5588 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BD64_559 PF08868 YugN-like family BD64_5596 PF08378 Nuclease-related domain BD64_56 PF04328 Selenoprotein, putative BD64_560 PF02308 MgtC family BD64_5602 PF01131 DNA topoisomerase BD64_5602 PF01751 Toprim domain BD64_5602 PF13342 C-terminal repeat of topoisomerase BD64_5604 PF00565 Staphylococcal nuclease homologue BD64_5607 PF02600 Disulfide bond formation protein DsbB BD64_5608 PF01022 Bacterial regulatory protein, arsR family BD64_5609 PF17209 Hfq protein BD64_5611 PF18801 response regulator aspartate phosphatase H, N terminal BD64_5616 PF00589 Phage integrase family BD64_5618 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment BD64_5619 PF01609 Transposase DDE domain BD64_5621 PF00665 Integrase core domain BD64_5621 PF13333 Integrase core domain BD64_5621 PF13276 HTH-like domain BD64_5624 PF13333 Integrase core domain BD64_5624 PF13276 HTH-like domain BD64_5624 PF00665 Integrase core domain BD64_5625 PF13276 HTH-like domain BD64_5625 PF00665 Integrase core domain BD64_5625 PF13333 Integrase core domain BD64_5627 PF14436 Bacterial EndoU nuclease BD64_5627 PF04740 LXG domain of WXG superfamily BD64_5634 PF00589 Phage integrase family BD64_5634 PF02899 Phage integrase, N-terminal SAM-like domain BD64_5636 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BD64_5636 PF18277 AbrB C-terminal domain BD64_5641 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain BD64_5641 PF09156 Anthrax toxin lethal factor, middle domain BD64_5645 PF01022 Bacterial regulatory protein, arsR family BD64_5646 PF07691 PA14 domain BD64_5646 PF17476 Clostridial binary toxin B/anthrax toxin PA domain 3 BD64_5646 PF17475 Clostridial binary toxin B/anthrax toxin PA domain 2 BD64_5646 PF03495 Clostridial binary toxin B/anthrax toxin PA Ca-binding domain BD64_5648 PF05504 Spore germination B3/ GerAC like, C-terminal BD64_5649 PF03323 Bacillus/Clostridium GerA spore germination protein BD64_5650 PF03845 Spore germination protein BD64_5651 PF00239 Resolvase, N terminal domain BD64_5651 PF02796 Helix-turn-helix domain of resolvase BD64_5652 PF01526 Tn3 transposase DDE domain BD64_5652 PF13700 Domain of unknown function (DUF4158) BD64_5656 PF09385 Histidine kinase N terminal BD64_5657 PF05043 Mga helix-turn-helix domain BD64_5657 PF00874 PRD domain BD64_5657 PF08279 HTH domain BD64_5658 PF02660 Glycerol-3-phosphate acyltransferase BD64_5663 PF00156 Phosphoribosyl transferase domain BD64_5664 PF00156 Phosphoribosyl transferase domain BD64_5665 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain BD64_5665 PF03497 Anthrax toxin LF subunit BD64_5673 PF13276 HTH-like domain BD64_5673 PF00665 Integrase core domain BD64_5673 PF13333 Integrase core domain BD64_5674 PF13276 HTH-like domain BD64_5674 PF00665 Integrase core domain BD64_5674 PF13333 Integrase core domain BD64_5678 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BD64_5678 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BD64_5678 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BD64_5679 PF00483 Nucleotidyl transferase BD64_568 PF05697 Bacterial trigger factor protein (TF) BD64_568 PF05698 Bacterial trigger factor protein (TF) C-terminus BD64_5680 PF00535 Glycosyl transferase family 2 BD64_5682 PF01569 PAP2 superfamily BD64_5683 PF00395 S-layer homology domain BD64_5689 PF04235 Protein of unknown function (DUF418) BD64_5692 PF10087 Uncharacterized protein conserved in bacteria (DUF2325) BD64_57 PF07694 5TMR of 5TMR-LYT BD64_57 PF00990 Diguanylate cyclase, GGDEF domain BD64_5719 PF00437 Type II/IV secretion system protein BD64_5739 PF01580 FtsK/SpoIIIE family BD64_5739 PF09397 Ftsk gamma domain BD64_5739 PF17854 FtsK alpha domain BD64_5739 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BD64_5744 PF01609 Transposase DDE domain BD64_5745 PF01609 Transposase DDE domain BD64_5746 PF01609 Transposase DDE domain BD64_5752 PF01609 Transposase DDE domain BD64_5753 PF01609 Transposase DDE domain BD64_5767 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BD64_58 PF08543 Phosphomethylpyrimidine kinase BD64_587 PF00056 lactate/malate dehydrogenase, NAD binding domain BD64_587 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BD64_588 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BD64_588 PF00128 Alpha amylase, catalytic domain BD64_588 PF02806 Alpha amylase, C-terminal all-beta domain BD64_589 PF00483 Nucleotidyl transferase BD64_59 PF07730 Histidine kinase BD64_59 PF13185 GAF domain BD64_590 PF00483 Nucleotidyl transferase BD64_591 PF08323 Starch synthase catalytic domain BD64_591 PF00534 Glycosyl transferases group 1 BD64_592 PF00343 Carbohydrate phosphorylase BD64_596 PF00313 'Cold-shock' DNA-binding domain BD64_597 PF01258 Prokaryotic dksA/traR C4-type zinc finger BD64_598 PF01040 UbiA prenyltransferase family BD64_599 PF00425 chorismate binding enzyme BD64_60 PF13185 GAF domain BD64_60 PF07730 Histidine kinase BD64_600 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BD64_600 PF16582 Middle domain of thiamine pyrophosphate BD64_600 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BD64_601 PF00561 alpha/beta hydrolase fold BD64_602 PF00378 Enoyl-CoA hydratase/isomerase BD64_603 PF00501 AMP-binding enzyme BD64_603 PF13193 AMP-binding enzyme C-terminal domain BD64_604 PF13378 Enolase C-terminal domain-like BD64_604 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BD64_605 PF00072 Response regulator receiver domain BD64_605 PF00486 Transcriptional regulatory protein, C terminal BD64_606 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_606 PF00512 His Kinase A (phospho-acceptor) domain BD64_607 PF02557 D-alanyl-D-alanine carboxypeptidase BD64_61 PF00072 Response regulator receiver domain BD64_61 PF00196 Bacterial regulatory proteins, luxR family BD64_610 PF01979 Amidohydrolase family BD64_611 PF03841 L-seryl-tRNA selenium transferase BD64_612 PF07071 KDGP aldolase BD64_615 PF02447 GntP family permease BD64_617 PF02687 FtsX-like permease family BD64_618 PF02687 FtsX-like permease family BD64_619 PF00005 ABC transporter BD64_62 PF02525 Flavodoxin-like fold BD64_620 PF02687 FtsX-like permease family BD64_621 PF02687 FtsX-like permease family BD64_623 PF02687 FtsX-like permease family BD64_624 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_625 PF00072 Response regulator receiver domain BD64_625 PF00486 Transcriptional regulatory protein, C terminal BD64_626 PF12833 Helix-turn-helix domain BD64_626 PF06445 GyrI-like small molecule binding domain BD64_627 PF00005 ABC transporter BD64_628 PF02687 FtsX-like permease family BD64_629 PF00398 Ribosomal RNA adenine dimethylase BD64_63 PF00027 Cyclic nucleotide-binding domain BD64_630 PF09335 SNARE associated Golgi protein BD64_633 PF00248 Aldo/keto reductase family BD64_637 PF00781 Diacylglycerol kinase catalytic domain BD64_638 PF00156 Phosphoribosyl transferase domain BD64_64 PF13419 Haloacid dehalogenase-like hydrolase BD64_643 PF00486 Transcriptional regulatory protein, C terminal BD64_643 PF00072 Response regulator receiver domain BD64_644 PF00672 HAMP domain BD64_644 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_644 PF00512 His Kinase A (phospho-acceptor) domain BD64_645 PF09515 Thiamine transporter protein (Thia_YuaJ) BD64_647 PF07670 Nucleoside recognition BD64_647 PF07664 Ferrous iron transport protein B C terminus BD64_647 PF17910 FeoB cytosolic helical domain BD64_647 PF02421 Ferrous iron transport protein B BD64_651 PF04012 PspA/IM30 family BD64_656 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BD64_656 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BD64_659 PF10676 Spore germination protein gerPA/gerPF BD64_66 PF01053 Cys/Met metabolism PLP-dependent enzyme BD64_660 PF02322 Cytochrome bd terminal oxidase subunit II BD64_661 PF01654 Cytochrome bd terminal oxidase subunit I BD64_662 PF01809 Putative membrane protein insertion efficiency factor BD64_663 PF00484 Carbonic anhydrase BD64_664 PF02664 S-Ribosylhomocysteinase (LuxS) BD64_668 PF00293 NUDIX domain BD64_67 PF04204 Homoserine O-succinyltransferase BD64_674 PF00528 Binding-protein-dependent transport system inner membrane component BD64_675 PF00005 ABC transporter BD64_68 PF01842 ACT domain BD64_68 PF03447 Homoserine dehydrogenase, NAD binding domain BD64_68 PF00742 Homoserine dehydrogenase BD64_680 PF00884 Sulfatase BD64_681 PF08386 TAP-like protein BD64_681 PF00561 alpha/beta hydrolase fold BD64_682 PF00989 PAS fold BD64_682 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_682 PF00512 His Kinase A (phospho-acceptor) domain BD64_682 PF08447 PAS fold BD64_683 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_683 PF00989 PAS fold BD64_683 PF13188 PAS domain BD64_683 PF00512 His Kinase A (phospho-acceptor) domain BD64_683 PF13426 PAS domain BD64_684 PF01784 NIF3 (NGG1p interacting factor 3) BD64_690 PF01293 Phosphoenolpyruvate carboxykinase BD64_691 PF02773 S-adenosylmethionine synthetase, C-terminal domain BD64_691 PF00438 S-adenosylmethionine synthetase, N-terminal domain BD64_691 PF02772 S-adenosylmethionine synthetase, central domain BD64_694 PF00994 Probable molybdopterin binding domain BD64_695 PF12804 MobA-like NTP transferase domain BD64_696 PF00534 Glycosyl transferases group 1 BD64_696 PF13439 Glycosyltransferase Family 4 BD64_697 PF01569 PAP2 superfamily BD64_698 PF00132 Bacterial transferase hexapeptide (six repeats) BD64_699 PF12146 Serine aminopeptidase, S33 BD64_7 PF00072 Response regulator receiver domain BD64_7 PF00486 Transcriptional regulatory protein, C terminal BD64_70 PF00356 Bacterial regulatory proteins, lacI family BD64_70 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BD64_700 PF10776 Protein of unknown function (DUF2600) BD64_703 PF01177 Asp/Glu/Hydantoin racemase BD64_705 PF13732 Domain of unknown function (DUF4162) BD64_705 PF00005 ABC transporter BD64_706 PF06962 Putative rRNA methylase BD64_707 PF16199 Radical_SAM C-terminal domain BD64_707 PF04055 Radical SAM superfamily BD64_708 PF10732 Protein of unknown function (DUF2524) BD64_71 PF13472 GDSL-like Lipase/Acylhydrolase family BD64_710 PF04235 Protein of unknown function (DUF418) BD64_710 PF07786 Protein of unknown function (DUF1624) BD64_711 PF00005 ABC transporter BD64_713 PF00589 Phage integrase family BD64_714 PF02080 TrkA-C domain BD64_715 PF00999 Sodium/hydrogen exchanger family BD64_716 PF07690 Major Facilitator Superfamily BD64_717 PF09334 tRNA synthetases class I (M) BD64_717 PF13603 Leucyl-tRNA synthetase, Domain 2 BD64_717 PF00133 tRNA synthetases class I (I, L, M and V) BD64_717 PF08264 Anticodon-binding domain of tRNA BD64_72 PF00005 ABC transporter BD64_722 PF03845 Spore germination protein BD64_723 PF03323 Bacillus/Clostridium GerA spore germination protein BD64_724 PF00561 alpha/beta hydrolase fold BD64_726 PF00581 Rhodanese-like domain BD64_73 PF12679 ABC-2 family transporter protein BD64_730 PF04055 Radical SAM superfamily BD64_730 PF06463 Molybdenum Cofactor Synthesis C BD64_731 PF00899 ThiF family BD64_732 PF01967 MoaC family BD64_733 PF03454 MoeA C-terminal region (domain IV) BD64_733 PF03453 MoeA N-terminal region (domain I and II) BD64_733 PF00994 Probable molybdopterin binding domain BD64_734 PF03205 Molybdopterin guanine dinucleotide synthesis protein B BD64_735 PF02391 MoaE protein BD64_738 PF06800 Sugar transport protein BD64_74 PF03167 Uracil DNA glycosylase superfamily BD64_740 PF02559 CarD-like/TRCF domain BD64_742 PF10957 Sporulation protein Cse60 BD64_744 PF08327 Activator of Hsp90 ATPase homolog 1-like protein BD64_745 PF01022 Bacterial regulatory protein, arsR family BD64_746 PF07690 Major Facilitator Superfamily BD64_748 PF01943 Polysaccharide biosynthesis protein BD64_748 PF14667 Polysaccharide biosynthesis C-terminal domain BD64_749 PF00849 RNA pseudouridylate synthase BD64_749 PF01479 S4 domain BD64_75 PF12823 Domain of unknown function (DUF3817) BD64_750 PF08220 DeoR-like helix-turn-helix domain BD64_751 PF01546 Peptidase family M20/M25/M40 BD64_752 PF01546 Peptidase family M20/M25/M40 BD64_753 PF02834 LigT like Phosphoesterase BD64_754 PF17999 Pullulanase N1-terminal domain BD64_754 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BD64_754 PF00128 Alpha amylase, catalytic domain BD64_755 PF01636 Phosphotransferase enzyme family BD64_756 PF14165 YtzH-like protein BD64_757 PF02390 Putative methyltransferase BD64_758 PF00753 Metallo-beta-lactamase superfamily BD64_760 PF05343 M42 glutamyl aminopeptidase BD64_761 PF01931 Protein of unknown function DUF84 BD64_762 PF00085 Thioredoxin BD64_763 PF07285 Protein of unknown function (DUF1444) BD64_764 PF01588 Putative tRNA binding domain BD64_764 PF14794 Domain of unknown function (DUF4479) BD64_766 PF09397 Ftsk gamma domain BD64_766 PF17854 FtsK alpha domain BD64_766 PF01580 FtsK/SpoIIIE family BD64_768 PF08245 Mur ligase middle domain BD64_768 PF01225 Mur ligase family, catalytic domain BD64_768 PF02875 Mur ligase family, glutamate ligase domain BD64_769 PF13302 Acetyltransferase (GNAT) domain BD64_77 PF00860 Permease family BD64_773 PF02073 Thermophilic metalloprotease (M29) BD64_775 PF11009 Protein of unknown function (DUF2847) BD64_776 PF07537 CamS sex pheromone cAM373 precursor BD64_777 PF00356 Bacterial regulatory proteins, lacI family BD64_78 PF02254 TrkA-N domain BD64_78 PF07885 Ion channel BD64_782 PF01741 Large-conductance mechanosensitive channel, MscL BD64_783 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BD64_784 PF12796 Ankyrin repeats (3 copies) BD64_785 PF00672 HAMP domain BD64_785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_785 PF00512 His Kinase A (phospho-acceptor) domain BD64_785 PF13426 PAS domain BD64_786 PF00486 Transcriptional regulatory protein, C terminal BD64_786 PF00072 Response regulator receiver domain BD64_788 PF00850 Histone deacetylase domain BD64_789 PF00571 CBS domain BD64_790 PF00583 Acetyltransferase (GNAT) family BD64_791 PF13193 AMP-binding enzyme C-terminal domain BD64_791 PF00501 AMP-binding enzyme BD64_793 PF04542 Sigma-70 region 2 BD64_793 PF08281 Sigma-70, region 4 BD64_795 PF00579 tRNA synthetases class I (W and Y) BD64_795 PF01479 S4 domain BD64_798 PF00163 Ribosomal protein S4/S9 N-terminal domain BD64_798 PF01479 S4 domain BD64_799 PF01053 Cys/Met metabolism PLP-dependent enzyme BD64_8 PF13426 PAS domain BD64_8 PF00512 His Kinase A (phospho-acceptor) domain BD64_8 PF00672 HAMP domain BD64_8 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_80 PF04241 Protein of unknown function (DUF423) BD64_800 PF13185 GAF domain BD64_801 PF00440 Bacterial regulatory proteins, tetR family BD64_802 PF00440 Bacterial regulatory proteins, tetR family BD64_803 PF00892 EamA-like transporter family BD64_804 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BD64_804 PF03466 LysR substrate binding domain BD64_805 PF06160 Septation ring formation regulator, EzrA BD64_806 PF00266 Aminotransferase class-V BD64_807 PF02926 THUMP domain BD64_807 PF02568 Thiamine biosynthesis protein (ThiI) BD64_808 PF00269 Small, acid-soluble spore proteins, alpha/beta type BD64_809 PF13193 AMP-binding enzyme C-terminal domain BD64_809 PF00501 AMP-binding enzyme BD64_81 PF09671 Spore coat protein (Spore_GerQ) BD64_811 PF07969 Amidohydrolase family BD64_812 PF01513 ATP-NAD kinase BD64_814 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BD64_815 PF08534 Redoxin BD64_816 PF02384 N-6 DNA Methylase BD64_817 PF00871 Acetokinase family BD64_82 PF07486 Cell Wall Hydrolase BD64_820 PF12787 EcsC protein family BD64_821 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BD64_821 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BD64_825 PF00764 Arginosuccinate synthase BD64_826 PF00206 Lyase BD64_826 PF14698 Argininosuccinate lyase C-terminal BD64_83 PF00768 D-alanyl-D-alanine carboxypeptidase BD64_83 PF07943 Penicillin-binding protein 5, C-terminal domain BD64_830 PF00582 Universal stress protein family BD64_832 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BD64_832 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BD64_834 PF01381 Helix-turn-helix BD64_836 PF07883 Cupin domain BD64_837 PF12746 GNAT acetyltransferase BD64_843 PF11518 Protein of unknown function (DUF3221) BD64_844 PF01321 Creatinase/Prolidase N-terminal domain BD64_844 PF00557 Metallopeptidase family M24 BD64_847 PF00571 CBS domain BD64_847 PF03061 Thioesterase superfamily BD64_847 PF07085 DRTGG domain BD64_847 PF00392 Bacterial regulatory proteins, gntR family BD64_85 PF01515 Phosphate acetyl/butaryl transferase BD64_850 PF14007 YtpI-like protein BD64_851 PF02272 DHHA1 domain BD64_851 PF01368 DHH family BD64_853 PF14034 Sporulation protein YtrH BD64_854 PF14579 Helix-hairpin-helix motif BD64_854 PF02811 PHP domain BD64_854 PF01336 OB-fold nucleic acid binding domain BD64_854 PF07733 Bacterial DNA polymerase III alpha NTPase domain BD64_854 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BD64_855 PF03949 Malic enzyme, NAD binding domain BD64_855 PF00390 Malic enzyme, N-terminal domain BD64_856 PF00392 Bacterial regulatory proteins, gntR family BD64_857 PF01039 Carboxyl transferase domain BD64_857 PF17848 Acetyl-coA carboxylase zinc finger domain BD64_858 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BD64_859 PF00365 Phosphofructokinase BD64_86 PF03099 Biotin/lipoate A/B protein ligase family BD64_860 PF00391 PEP-utilising enzyme, mobile domain BD64_860 PF02887 Pyruvate kinase, alpha/beta domain BD64_860 PF00224 Pyruvate kinase, barrel domain BD64_861 PF04186 FxsA cytoplasmic membrane protein BD64_862 PF01594 AI-2E family transporter BD64_863 PF04284 Protein of unknown function (DUF441) BD64_864 PF00285 Citrate synthase, C-terminal domain BD64_865 PF00180 Isocitrate/isopropylmalate dehydrogenase BD64_866 PF00056 lactate/malate dehydrogenase, NAD binding domain BD64_866 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BD64_869 PF00486 Transcriptional regulatory protein, C terminal BD64_869 PF00072 Response regulator receiver domain BD64_870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_870 PF16736 Single Cache-like BD64_870 PF00989 PAS fold BD64_870 PF00512 His Kinase A (phospho-acceptor) domain BD64_871 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BD64_871 PF00476 DNA polymerase family A BD64_871 PF01367 5'-3' exonuclease, C-terminal SAM fold BD64_872 PF06827 Zinc finger found in FPG and IleRS BD64_872 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BD64_872 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BD64_873 PF02659 Putative manganese efflux pump BD64_874 PF01121 Dephospho-CoA kinase BD64_875 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BD64_875 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BD64_876 PF02675 S-adenosylmethionine decarboxylase BD64_877 PF03477 ATP cone domain BD64_878 PF07261 Replication initiation and membrane attachment BD64_879 PF07319 Primosomal protein DnaI N-terminus BD64_879 PF01695 IstB-like ATP binding protein BD64_880 PF08812 YtxC-like family BD64_881 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BD64_881 PF03129 Anticodon binding domain BD64_881 PF02824 TGS domain BD64_881 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BD64_882 PF00707 Translation initiation factor IF-3, C-terminal domain BD64_882 PF05198 Translation initiation factor IF-3, N-terminal domain BD64_883 PF01632 Ribosomal protein L35 BD64_884 PF00453 Ribosomal protein L20 BD64_886 PF05343 M42 glutamyl aminopeptidase BD64_887 PF00440 Bacterial regulatory proteins, tetR family BD64_887 PF16859 Tetracyclin repressor-like, C-terminal domain BD64_889 PF07690 Major Facilitator Superfamily BD64_89 PF07293 Protein of unknown function (DUF1450) BD64_894 PF01966 HD domain BD64_895 PF14098 Small, acid-soluble spore protein I BD64_896 PF08032 RNA 2'-O ribose methyltransferase substrate binding BD64_896 PF00588 SpoU rRNA Methylase family BD64_897 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BD64_897 PF01409 tRNA synthetases class II core domain (F) BD64_898 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BD64_898 PF01588 Putative tRNA binding domain BD64_898 PF03484 tRNA synthetase B5 domain BD64_898 PF03147 Ferredoxin-fold anticodon binding domain BD64_898 PF03483 B3/4 domain BD64_899 PF00152 tRNA synthetases class II (D, K and N) BD64_899 PF01336 OB-fold nucleic acid binding domain BD64_9 PF07435 YycH protein BD64_90 PF01032 FecCD transport family BD64_903 PF11858 Domain of unknown function (DUF3378) BD64_903 PF01351 Ribonuclease HII BD64_904 PF05164 Cell division protein ZapA BD64_905 PF02674 Colicin V production protein BD64_906 PF02811 PHP domain BD64_906 PF14791 DNA polymerase beta thumb BD64_906 PF14716 Helix-hairpin-helix domain BD64_907 PF01713 Smr domain BD64_907 PF00488 MutS domain V BD64_909 PF00849 RNA pseudouridylate synthase BD64_909 PF01479 S4 domain BD64_91 PF01032 FecCD transport family BD64_910 PF05525 Branched-chain amino acid transport protein BD64_911 PF05031 Iron Transport-associated domain BD64_913 PF05031 Iron Transport-associated domain BD64_914 PF01497 Periplasmic binding protein BD64_915 PF01032 FecCD transport family BD64_916 PF00005 ABC transporter BD64_917 PF04203 Sortase domain BD64_918 PF03992 Antibiotic biosynthesis monooxygenase BD64_92 PF01032 FecCD transport family BD64_920 PF10672 S-adenosylmethionine-dependent methyltransferase BD64_920 PF17785 PUA-like domain BD64_921 PF09962 Uncharacterized conserved protein (DUF2196) BD64_923 PF00072 Response regulator receiver domain BD64_923 PF00486 Transcriptional regulatory protein, C terminal BD64_924 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_924 PF00512 His Kinase A (phospho-acceptor) domain BD64_925 PF00005 ABC transporter BD64_93 PF00005 ABC transporter BD64_931 PF05163 DinB family BD64_932 PF01032 FecCD transport family BD64_933 PF01497 Periplasmic binding protein BD64_934 PF01497 Periplasmic binding protein BD64_936 PF00501 AMP-binding enzyme BD64_936 PF13193 AMP-binding enzyme C-terminal domain BD64_937 PF08359 YsiA-like protein, C-terminal region BD64_937 PF00440 Bacterial regulatory proteins, tetR family BD64_938 PF00378 Enoyl-CoA hydratase/isomerase BD64_939 PF01012 Electron transfer flavoprotein domain BD64_94 PF01497 Periplasmic binding protein BD64_940 PF00766 Electron transfer flavoprotein FAD-binding domain BD64_940 PF01012 Electron transfer flavoprotein domain BD64_941 PF00085 Thioredoxin BD64_942 PF08459 UvrC Helix-hairpin-helix N-terminal BD64_942 PF02151 UvrB/uvrC motif BD64_942 PF01541 GIY-YIG catalytic domain BD64_943 PF10702 Protein of unknown function (DUF2507) BD64_944 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BD64_945 PF00890 FAD binding domain BD64_945 PF02910 Fumarate reductase flavoprotein C-term BD64_946 PF13085 2Fe-2S iron-sulfur cluster binding domain BD64_946 PF13183 4Fe-4S dicluster domain BD64_947 PF03061 Thioesterase superfamily BD64_948 PF02557 D-alanyl-D-alanine carboxypeptidase BD64_949 PF01618 MotA/TolQ/ExbB proton channel family BD64_95 PF01966 HD domain BD64_950 PF13677 Membrane MotB of proton-channel complex MotA/MotB BD64_950 PF00691 OmpA family BD64_951 PF13677 Membrane MotB of proton-channel complex MotA/MotB BD64_951 PF00691 OmpA family BD64_952 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) BD64_953 PF13732 Domain of unknown function (DUF4162) BD64_953 PF00005 ABC transporter BD64_955 PF02082 Transcriptional regulator BD64_956 PF00230 Major intrinsic protein BD64_957 PF13536 Putative multidrug resistance efflux transporter BD64_958 PF07883 Cupin domain BD64_958 PF01381 Helix-turn-helix BD64_959 PF04024 PspC domain BD64_96 PF01361 Tautomerase enzyme BD64_962 PF00072 Response regulator receiver domain BD64_962 PF04397 LytTr DNA-binding domain BD64_963 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD64_963 PF06580 Histidine kinase BD64_963 PF07694 5TMR of 5TMR-LYT BD64_964 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BD64_964 PF00005 ABC transporter BD64_965 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BD64_965 PF00005 ABC transporter BD64_966 PF00528 Binding-protein-dependent transport system inner membrane component BD64_968 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BD64_969 PF07969 Amidohydrolase family BD64_97 PF02163 Peptidase family M50 BD64_970 PF07969 Amidohydrolase family BD64_972 PF00860 Permease family BD64_973 PF00196 Bacterial regulatory proteins, luxR family BD64_976 PF00440 Bacterial regulatory proteins, tetR family BD64_978 PF07690 Major Facilitator Superfamily BD64_979 PF01177 Asp/Glu/Hydantoin racemase BD64_98 PF08741 YwhD family BD64_980 PF10646 Sporulation and spore germination BD64_981 PF01138 3' exoribonuclease family, domain 1 BD64_981 PF03725 3' exoribonuclease family, domain 2 BD64_982 PF01725 Ham1 family BD64_983 PF12850 Calcineurin-like phosphoesterase superfamily domain BD64_987 PF11724 YvbH-like oligomerisation region BD64_987 PF08000 Bacterial PH domain BD64_99 PF00912 Transglycosylase BD64_99 PF00905 Penicillin binding protein transpeptidase domain BD64_991 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BD64_991 PF05698 Bacterial trigger factor protein (TF) C-terminus BD64_991 PF05697 Bacterial trigger factor protein (TF) BD64_992 PF07724 AAA domain (Cdc48 subfamily) BD64_992 PF06689 ClpX C4-type zinc finger BD64_992 PF10431 C-terminal, D2-small domain, of ClpB protein BD64_993 PF05362 Lon protease (S16) C-terminal proteolytic domain BD64_993 PF00004 ATPase family associated with various cellular activities (AAA) BD64_994 PF00004 ATPase family associated with various cellular activities (AAA) BD64_994 PF02190 ATP-dependent protease La (LON) substrate-binding domain BD64_994 PF05362 Lon protease (S16) C-terminal proteolytic domain BD64_995 PF01926 50S ribosome-binding GTPase BD64_996 PF02566 OsmC-like protein BD64_997 PF01047 MarR family BD64_998 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BD64_998 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BD64_998 PF01488 Shikimate / quinate 5-dehydrogenase BD64_999 PF01578 Cytochrome C assembly protein