AOD59_00005 SM00382 ATPases associated with a variety of cellular activities AOD59_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain AOD59_00010 SM00480 DNA polymerase III beta subunit AOD59_00025 SM00387 Histidine kinase-like ATPases AOD59_00025 SM00433 TopoisomeraseII AOD59_00030 SM00434 DNA Topoisomerase IV AOD59_00065 SM00116 Domain in cystathionine beta-synthase and other proteins. AOD59_00065 SM01240 AOD59_00065 AOD59_00070 SM00936 Penicillin-binding protein 5, C-terminal domain AOD59_00125 SM00382 ATPases associated with a variety of cellular activities AOD59_00135 SM00493 AOD59_00135 AOD59_00220 SM00966 SpoVT / AbrB like domain AOD59_00235 SM00493 AOD59_00235 AOD59_00240 SM00650 Ribosomal RNA adenine dimethylases AOD59_00285 SM01400 AOD59_00285 AOD59_00300 SM00487 DEAD-like helicases superfamily AOD59_00300 SM00490 helicase superfamily c-terminal domain AOD59_00300 SM00982 AOD59_00300 AOD59_00300 SM01058 CarD-like/TRCF domain AOD59_00305 SM00966 SpoVT / AbrB like domain AOD59_00320 SM00363 S4 RNA-binding domain AOD59_00340 SM00316 Ribosomal protein S1-like RNA-binding domain AOD59_00355 SM00331 Sigma factor PP2C-like phosphatases AOD59_00355 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AOD59_00360 SM00977 TilS substrate C-terminal domain AOD59_00370 SM00382 ATPases associated with a variety of cellular activities AOD59_00410 SM00905 Dihydroneopterin aldolase AOD59_00420 SM00530 Helix-turn-helix XRE-family like proteins AOD59_00465 SM00382 ATPases associated with a variety of cellular activities AOD59_00465 SM01086 C-terminal, D2-small domain, of ClpB protein AOD59_00470 SM00382 ATPases associated with a variety of cellular activities AOD59_00480 SM00670 Large family of predicted nucleotide-binding domains AOD59_00505 SM00840 AOD59_00505 AOD59_00510 SM00535 Ribonuclease III family AOD59_00515 SM00967 RNA 2'-O ribose methyltransferase substrate binding AOD59_00525 SM00421 helix_turn_helix, Lux Regulon AOD59_00540 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AOD59_00545 SM00649 Ribosomal protein L11/L12 AOD59_00575 SM00663 RNA polymerase I subunit A N-terminus AOD59_00595 SM00838 Elongation factor G C-terminus AOD59_00595 SM00889 Elongation factor G, domain IV AOD59_00605 SM01403 AOD59_00605 AOD59_00625 SM01382 AOD59_00625 AOD59_00625 SM01383 AOD59_00625 AOD59_00640 SM00322 K homology RNA-binding domain AOD59_00660 SM01374 AOD59_00660 AOD59_00665 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AOD59_00725 SM00316 Ribosomal protein S1-like RNA-binding domain AOD59_00745 SM00662 RNA polymerases D AOD59_00755 SM00382 ATPases associated with a variety of cellular activities AOD59_00760 SM00382 ATPases associated with a variety of cellular activities AOD59_00790 SM00646 AOD59_00790 AOD59_00805 SM01251 AOD59_00805 AOD59_00925 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD59_00925 SM00895 AOD59_00925 AOD59_00940 SM01350 AOD59_00940 AOD59_00990 SM00382 ATPases associated with a variety of cellular activities AOD59_00990 SM00930 AOD59_00990 AOD59_01000 SM00829 Enoylreductase AOD59_01050 SM00382 ATPases associated with a variety of cellular activities AOD59_01055 SM00382 ATPases associated with a variety of cellular activities AOD59_01070 SM00342 helix_turn_helix, arabinose operon control protein AOD59_01165 SM00563 Phosphate acyltransferases AOD59_01175 SM00354 helix_turn _helix lactose operon repressor AOD59_01230 SM00382 ATPases associated with a variety of cellular activities AOD59_01260 SM00382 ATPases associated with a variety of cellular activities AOD59_01265 SM00382 ATPases associated with a variety of cellular activities AOD59_01325 SM00487 DEAD-like helicases superfamily AOD59_01325 SM00490 helicase superfamily c-terminal domain AOD59_01350 SM01005 Alanine racemase, C-terminal domain AOD59_01365 SM00316 Ribosomal protein S1-like RNA-binding domain AOD59_01365 SM00732 Likely ribonuclease with RNase H fold. AOD59_01375 SM00731 SprT homologues. AOD59_01480 SM00382 ATPases associated with a variety of cellular activities AOD59_01485 SM00881 CoA binding domain AOD59_01500 SM00883 Chaperonin 10 Kd subunit AOD59_01520 SM00448 cheY-homologous receiver domain AOD59_01520 SM00862 Transcriptional regulatory protein, C terminal AOD59_01525 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD59_01525 SM00387 Histidine kinase-like ATPases AOD59_01525 SM00388 His Kinase A (phosphoacceptor) domain AOD59_01605 SM00382 ATPases associated with a variety of cellular activities AOD59_01610 SM00387 Histidine kinase-like ATPases AOD59_01610 SM00388 His Kinase A (phosphoacceptor) domain AOD59_01615 SM00448 cheY-homologous receiver domain AOD59_01615 SM00862 Transcriptional regulatory protein, C terminal AOD59_01635 SM01001 AIR carboxylase AOD59_01645 SM00998 Adenylosuccinate lyase C-terminus AOD59_01660 SM01211 AOD59_01660 AOD59_01685 SM00798 AICARFT/IMPCHase bienzyme AOD59_01685 SM00851 MGS-like domain AOD59_01690 SM01209 AOD59_01690 AOD59_01690 SM01210 AOD59_01690 AOD59_01700 SM00244 prohibitin homologues AOD59_01720 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AOD59_01720 SM00292 breast cancer carboxy-terminal domain AOD59_01720 SM00532 Ligase N family AOD59_01750 SM00382 ATPases associated with a variety of cellular activities AOD59_01750 SM00930 AOD59_01750 AOD59_01780 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD59_01800 SM00845 GatB domain AOD59_01805 SM00046 Diacylglycerol kinase catalytic domain (presumed) AOD59_01820 SM00382 ATPases associated with a variety of cellular activities AOD59_01885 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AOD59_01930 SM01007 Class II Aldolase and Adducin N-terminal domain AOD59_02045 SM00062 Bacterial periplasmic substrate-binding proteins AOD59_02045 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AOD59_02050 SM00382 ATPases associated with a variety of cellular activities AOD59_02060 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOD59_02060 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD59_02065 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOD59_02065 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD59_02070 SM00642 Alpha-amylase domain AOD59_02090 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AOD59_02090 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AOD59_02090 SM00493 AOD59_02090 AOD59_02110 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOD59_02110 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD59_02130 SM00382 ATPases associated with a variety of cellular activities AOD59_02135 SM00382 ATPases associated with a variety of cellular activities AOD59_02140 SM00060 Fibronectin type 3 domain AOD59_02140 SM00636 AOD59_02140 AOD59_02140 SM00637 AOD59_02140 AOD59_02170 SM00530 Helix-turn-helix XRE-family like proteins AOD59_02195 SM00946 Prolyl-tRNA synthetase, C-terminal AOD59_02240 SM00831 Cation transporter/ATPase, N-terminus AOD59_02250 SM00226 Low molecular weight phosphatase family AOD59_02345 SM00478 endonuclease III AOD59_02360 SM00530 Helix-turn-helix XRE-family like proteins AOD59_02375 SM00530 Helix-turn-helix XRE-family like proteins AOD59_02380 SM00530 Helix-turn-helix XRE-family like proteins AOD59_02410 SM00382 ATPases associated with a variety of cellular activities AOD59_02645 SM00382 ATPases associated with a variety of cellular activities AOD59_02665 SM00530 Helix-turn-helix XRE-family like proteins AOD59_02725 SM00984 UDP binding domain AOD59_02810 SM00478 endonuclease III AOD59_02810 SM00525 AOD59_02810 AOD59_02835 SM00382 ATPases associated with a variety of cellular activities AOD59_02855 SM00382 ATPases associated with a variety of cellular activities AOD59_03010 SM00567 E-Z type HEAT repeats AOD59_03025 SM00052 Putative diguanylate phosphodiesterase AOD59_03025 SM00091 PAS domain AOD59_03025 SM00267 diguanylate cyclase AOD59_03035 SM00763 PrkA AAA domain AOD59_03050 SM00364 Leucine-rich repeats, bacterial type AOD59_03050 SM00365 Leucine-rich repeat, SDS22-like subfamily AOD59_03050 SM00369 Leucine-rich repeats, typical (most populated) subfamily AOD59_03050 SM00725 NEAr Transporter domain AOD59_03065 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AOD59_03075 SM00244 prohibitin homologues AOD59_03080 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOD59_03080 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD59_03085 SM00091 PAS domain AOD59_03085 SM00387 Histidine kinase-like ATPases AOD59_03110 SM00248 ankyrin repeats AOD59_03120 SM00382 ATPases associated with a variety of cellular activities AOD59_03145 SM00448 cheY-homologous receiver domain AOD59_03145 SM00862 Transcriptional regulatory protein, C terminal AOD59_03150 SM00387 Histidine kinase-like ATPases AOD59_03150 SM00388 His Kinase A (phosphoacceptor) domain AOD59_03165 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOD59_03165 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD59_03170 SM00387 Histidine kinase-like ATPases AOD59_03175 SM00448 cheY-homologous receiver domain AOD59_03185 SM00919 Malic enzyme, NAD binding domain AOD59_03185 SM01274 AOD59_03185 AOD59_03200 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD59_03210 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD59_03210 SM00387 Histidine kinase-like ATPases AOD59_03210 SM00388 His Kinase A (phosphoacceptor) domain AOD59_03215 SM00448 cheY-homologous receiver domain AOD59_03215 SM00862 Transcriptional regulatory protein, C terminal AOD59_03235 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AOD59_03235 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AOD59_03250 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AOD59_03250 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AOD59_03260 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOD59_03335 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOD59_03365 SM00382 ATPases associated with a variety of cellular activities AOD59_03390 SM00327 von Willebrand factor (vWF) type A domain AOD59_03395 SM00382 ATPases associated with a variety of cellular activities AOD59_03400 SM00155 Phospholipase D. Active site motifs. AOD59_03415 SM00052 Putative diguanylate phosphodiesterase AOD59_03415 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AOD59_03415 SM00091 PAS domain AOD59_03415 SM00267 diguanylate cyclase AOD59_03425 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD59_03425 SM00866 AOD59_03425 AOD59_03435 SM00642 Alpha-amylase domain AOD59_03470 SM00382 ATPases associated with a variety of cellular activities AOD59_03475 SM00062 Bacterial periplasmic substrate-binding proteins AOD59_03475 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AOD59_03525 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD59_03525 SM00387 Histidine kinase-like ATPases AOD59_03525 SM00388 His Kinase A (phosphoacceptor) domain AOD59_03530 SM00448 cheY-homologous receiver domain AOD59_03530 SM00862 Transcriptional regulatory protein, C terminal AOD59_03570 SM00382 ATPases associated with a variety of cellular activities AOD59_03585 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD59_03600 SM00354 helix_turn _helix lactose operon repressor AOD59_03615 SM00382 ATPases associated with a variety of cellular activities AOD59_03650 SM00829 Enoylreductase AOD59_03660 SM00770 Zinc dependent phospholipase C (alpha toxin) AOD59_03695 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOD59_03705 SM00530 Helix-turn-helix XRE-family like proteins AOD59_03750 SM00530 Helix-turn-helix XRE-family like proteins AOD59_03850 SM00899 AOD59_03850 AOD59_03990 SM00116 Domain in cystathionine beta-synthase and other proteins. AOD59_04010 SM00287 Bacterial SH3 domain homologues AOD59_04020 SM00382 ATPases associated with a variety of cellular activities AOD59_04110 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD59_04150 SM00640 Glycosyl hydrolases family 32 AOD59_04160 SM00354 helix_turn _helix lactose operon repressor AOD59_04230 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD59_04245 SM00450 Rhodanese Homology Domain AOD59_04255 SM00450 Rhodanese Homology Domain AOD59_04260 SM00450 Rhodanese Homology Domain AOD59_04260 SM00849 Metallo-beta-lactamase superfamily AOD59_04270 SM00450 Rhodanese Homology Domain AOD59_04275 SM00450 Rhodanese Homology Domain AOD59_04300 SM00829 Enoylreductase AOD59_04350 SM00287 Bacterial SH3 domain homologues AOD59_04360 SM00382 ATPases associated with a variety of cellular activities AOD59_04415 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen AOD59_04515 SM00344 helix_turn_helix ASNC type AOD59_04580 SM01060 AOD59_04580 AOD59_04615 SM00382 ATPases associated with a variety of cellular activities AOD59_04625 SM00062 Bacterial periplasmic substrate-binding proteins AOD59_04625 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AOD59_04635 SM00382 ATPases associated with a variety of cellular activities AOD59_04715 SM00729 Elongator protein 3, MiaB family, Radical SAM AOD59_04750 SM00957 SecA DEAD-like domain AOD59_04750 SM00958 SecA preprotein cross-linking domain AOD59_04765 SM00635 Bacterial Ig-like domain 2 AOD59_04825 SM00646 AOD59_04825 AOD59_04895 SM00382 ATPases associated with a variety of cellular activities AOD59_04910 SM00860 SMI1 / KNR4 family AOD59_04915 SM00860 SMI1 / KNR4 family AOD59_04930 SM00091 PAS domain AOD59_04930 SM00387 Histidine kinase-like ATPases AOD59_04935 SM00448 cheY-homologous receiver domain AOD59_04970 SM00422 helix_turn_helix, mercury resistance AOD59_05095 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD59_05165 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOD59_05185 SM00460 Transglutaminase/protease-like homologues AOD59_05250 SM00331 Sigma factor PP2C-like phosphatases AOD59_05250 SM00448 cheY-homologous receiver domain AOD59_05255 SM00138 Methyltransferase, chemotaxis proteins AOD59_05260 SM00387 Histidine kinase-like ATPases AOD59_05260 SM00388 His Kinase A (phosphoacceptor) domain AOD59_05260 SM00448 cheY-homologous receiver domain AOD59_05300 SM00829 Enoylreductase AOD59_05340 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOD59_05365 SM00028 Tetratricopeptide repeats AOD59_05435 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD59_05485 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD59_05500 SM00382 ATPases associated with a variety of cellular activities AOD59_05565 SM00422 helix_turn_helix, mercury resistance AOD59_05680 SM00849 Metallo-beta-lactamase superfamily AOD59_05705 SM00725 NEAr Transporter domain AOD59_05775 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOD59_05790 SM00342 helix_turn_helix, arabinose operon control protein AOD59_05790 SM00871 Bacterial transcription activator, effector binding domain AOD59_05805 SM00387 Histidine kinase-like ATPases AOD59_05805 SM00388 His Kinase A (phosphoacceptor) domain AOD59_05810 SM00448 cheY-homologous receiver domain AOD59_05810 SM00862 Transcriptional regulatory protein, C terminal AOD59_05840 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOD59_05840 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD59_05880 SM00357 Cold shock protein domain AOD59_05995 SM01060 AOD59_05995 AOD59_06010 SM00642 Alpha-amylase domain AOD59_06015 SM00530 Helix-turn-helix XRE-family like proteins AOD59_06025 SM00316 Ribosomal protein S1-like RNA-binding domain AOD59_06075 SM00382 ATPases associated with a variety of cellular activities AOD59_06075 SM01086 C-terminal, D2-small domain, of ClpB protein AOD59_06105 SM00825 Beta-ketoacyl synthase AOD59_06145 SM00382 ATPases associated with a variety of cellular activities AOD59_06150 SM00382 ATPases associated with a variety of cellular activities AOD59_06190 SM00155 Phospholipase D. Active site motifs. AOD59_06220 SM01118 AOD59_06220 AOD59_06230 SM00954 Region found in RelA / SpoT proteins AOD59_06385 SM00635 Bacterial Ig-like domain 2 AOD59_06500 SM00861 Transketolase, pyrimidine binding domain AOD59_06505 SM00530 Helix-turn-helix XRE-family like proteins AOD59_06600 SM00530 Helix-turn-helix XRE-family like proteins AOD59_06620 SM00382 ATPases associated with a variety of cellular activities AOD59_06640 SM00014 Acid phosphatase homologues AOD59_06690 SM00448 cheY-homologous receiver domain AOD59_06690 SM00862 Transcriptional regulatory protein, C terminal AOD59_06695 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD59_06695 SM00387 Histidine kinase-like ATPases AOD59_06695 SM00388 His Kinase A (phosphoacceptor) domain AOD59_06700 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD59_06700 SM00895 AOD59_06700 AOD59_06770 SM00822 AOD59_06770 AOD59_06835 SM00420 helix_turn_helix, Deoxyribose operon repressor AOD59_06835 SM01134 AOD59_06835 AOD59_06870 SM00387 Histidine kinase-like ATPases AOD59_06870 SM00388 His Kinase A (phosphoacceptor) domain AOD59_06875 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD59_06895 SM00387 Histidine kinase-like ATPases AOD59_06895 SM00388 His Kinase A (phosphoacceptor) domain AOD59_06965 SM00465 GIY-YIG type nucleases (URI domain) AOD59_06965 SM00496 Intron-encoded nuclease repeat 2 AOD59_06980 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD59_06985 SM00382 ATPases associated with a variety of cellular activities AOD59_06995 SM00382 ATPases associated with a variety of cellular activities AOD59_07015 SM00344 helix_turn_helix ASNC type AOD59_07135 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD59_07210 SM00917 LeuA allosteric (dimerisation) domain AOD59_07215 SM01329 AOD59_07215 AOD59_07400 SM00387 Histidine kinase-like ATPases AOD59_07405 SM00421 helix_turn_helix, Lux Regulon AOD59_07405 SM00448 cheY-homologous receiver domain AOD59_07500 SM00091 PAS domain AOD59_07500 SM00388 His Kinase A (phosphoacceptor) domain AOD59_07520 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD59_07520 SM00387 Histidine kinase-like ATPases AOD59_07520 SM00388 His Kinase A (phosphoacceptor) domain AOD59_07575 SM00363 S4 RNA-binding domain AOD59_07595 SM00448 cheY-homologous receiver domain AOD59_07595 SM00862 Transcriptional regulatory protein, C terminal AOD59_07600 SM00091 PAS domain AOD59_07600 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD59_07600 SM00387 Histidine kinase-like ATPases AOD59_07600 SM00388 His Kinase A (phosphoacceptor) domain AOD59_07610 SM00257 Lysin motif AOD59_07635 SM00487 DEAD-like helicases superfamily AOD59_07635 SM00490 helicase superfamily c-terminal domain AOD59_07645 SM00257 Lysin motif AOD59_07655 SM00422 helix_turn_helix, mercury resistance AOD59_07665 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AOD59_07680 SM00644 AOD59_07680 AOD59_07690 SM00870 AOD59_07690 AOD59_07705 SM00316 Ribosomal protein S1-like RNA-binding domain AOD59_07710 SM01240 AOD59_07710 AOD59_07765 SM00411 bacterial (prokaryotic) histone like domain AOD59_07790 SM00562 AOD59_07790 AOD59_07810 SM00028 Tetratricopeptide repeats AOD59_07815 SM00914 AOD59_07815 AOD59_07860 SM00986 Uracil DNA glycosylase superfamily AOD59_07860 SM00987 UreE urease accessory protein, C-terminal domain AOD59_07885 SM00851 MGS-like domain AOD59_07935 SM00479 AOD59_07935 AOD59_07935 SM00487 DEAD-like helicases superfamily AOD59_07935 SM00491 AOD59_07935 AOD59_07960 SM00478 endonuclease III AOD59_07960 SM00525 AOD59_07960 AOD59_07970 SM00060 Fibronectin type 3 domain AOD59_08020 SM00981 AOD59_08020 AOD59_08030 SM00491 AOD59_08030 AOD59_08090 SM00450 Rhodanese Homology Domain AOD59_08120 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AOD59_08120 SM00475 5'-3' exonuclease AOD59_08230 SM00357 Cold shock protein domain AOD59_08280 SM00849 Metallo-beta-lactamase superfamily AOD59_08285 SM00422 helix_turn_helix, mercury resistance AOD59_08285 SM00871 Bacterial transcription activator, effector binding domain AOD59_08375 SM00448 cheY-homologous receiver domain AOD59_08400 SM00138 Methyltransferase, chemotaxis proteins AOD59_08485 SM00382 ATPases associated with a variety of cellular activities AOD59_08550 SM00028 Tetratricopeptide repeats AOD59_08570 SM00028 Tetratricopeptide repeats AOD59_08655 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AOD59_08710 SM00530 Helix-turn-helix XRE-family like proteins AOD59_08730 SM00382 ATPases associated with a variety of cellular activities AOD59_08745 SM00849 Metallo-beta-lactamase superfamily AOD59_08745 SM01027 Beta-Casp domain AOD59_08765 SM00835 Cupin AOD59_08780 SM00855 Phosphoglycerate mutase family AOD59_08840 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD59_08840 SM00895 AOD59_08840 AOD59_08850 SM00833 Cobalamin synthesis protein cobW C-terminal domain AOD59_08940 SM00530 Helix-turn-helix XRE-family like proteins AOD59_08985 SM00421 helix_turn_helix, Lux Regulon AOD59_08985 SM00448 cheY-homologous receiver domain AOD59_08995 SM00382 ATPases associated with a variety of cellular activities AOD59_09010 SM00155 Phospholipase D. Active site motifs. AOD59_09030 SM00919 Malic enzyme, NAD binding domain AOD59_09030 SM01274 AOD59_09030 AOD59_09035 SM00387 Histidine kinase-like ATPases AOD59_09040 SM00448 cheY-homologous receiver domain AOD59_09045 SM00487 DEAD-like helicases superfamily AOD59_09045 SM00490 helicase superfamily c-terminal domain AOD59_09110 SM00646 AOD59_09110 AOD59_09115 SM00047 Lysozyme subfamily 2 AOD59_09290 SM00854 Bacterial capsule synthesis protein PGA_cap AOD59_09320 SM00850 LytTr DNA-binding domain AOD59_09375 SM00729 Elongator protein 3, MiaB family, Radical SAM AOD59_09385 SM00448 cheY-homologous receiver domain AOD59_09385 SM00862 Transcriptional regulatory protein, C terminal AOD59_09405 SM00450 Rhodanese Homology Domain AOD59_09455 SM01133 AOD59_09455 AOD59_09465 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AOD59_09500 SM01011 Aminopeptidase P, N-terminal domain AOD59_09510 SM00287 Bacterial SH3 domain homologues AOD59_09520 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AOD59_09520 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AOD59_09520 SM00493 AOD59_09520 AOD59_09615 SM00833 Cobalamin synthesis protein cobW C-terminal domain AOD59_09650 SM00382 ATPases associated with a variety of cellular activities AOD59_09655 SM00382 ATPases associated with a variety of cellular activities AOD59_09690 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD59_09710 SM00382 ATPases associated with a variety of cellular activities AOD59_09715 SM00382 ATPases associated with a variety of cellular activities AOD59_09750 SM00287 Bacterial SH3 domain homologues AOD59_09765 SM00382 ATPases associated with a variety of cellular activities AOD59_09770 SM00448 cheY-homologous receiver domain AOD59_09770 SM00862 Transcriptional regulatory protein, C terminal AOD59_09775 SM00387 Histidine kinase-like ATPases AOD59_09775 SM00388 His Kinase A (phosphoacceptor) domain AOD59_09855 SM00448 cheY-homologous receiver domain AOD59_09855 SM00862 Transcriptional regulatory protein, C terminal AOD59_09860 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD59_09860 SM00387 Histidine kinase-like ATPases AOD59_09860 SM00388 His Kinase A (phosphoacceptor) domain AOD59_09950 SM00460 Transglutaminase/protease-like homologues AOD59_09975 SM00966 SpoVT / AbrB like domain AOD59_09985 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOD59_10020 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOD59_10020 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD59_10085 SM00833 Cobalamin synthesis protein cobW C-terminal domain AOD59_10195 SM00855 Phosphoglycerate mutase family AOD59_10245 SM00155 Phospholipase D. Active site motifs. AOD59_10270 SM01091 Transporter associated domain AOD59_10345 SM00244 prohibitin homologues AOD59_10350 SM00855 Phosphoglycerate mutase family AOD59_10365 SM01005 Alanine racemase, C-terminal domain AOD59_10395 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD59_10510 SM00487 DEAD-like helicases superfamily AOD59_10510 SM00490 helicase superfamily c-terminal domain AOD59_10530 SM00829 Enoylreductase AOD59_10550 SM00849 Metallo-beta-lactamase superfamily AOD59_10565 SM00460 Transglutaminase/protease-like homologues AOD59_10590 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AOD59_10610 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD59_10615 SM00382 ATPases associated with a variety of cellular activities AOD59_10625 SM00100 Cyclic nucleotide-monophosphate binding domain AOD59_10625 SM00419 helix_turn_helix, cAMP Regulatory protein AOD59_10630 SM00729 Elongator protein 3, MiaB family, Radical SAM AOD59_10640 SM00852 Probable molybdopterin binding domain AOD59_10705 SM00894 Excalibur calcium-binding domain AOD59_10760 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOD59_10765 SM00382 ATPases associated with a variety of cellular activities AOD59_10800 SM00567 E-Z type HEAT repeats AOD59_10800 SM00932 Scaffold protein Nfu/NifU N terminal AOD59_10820 SM00836 DALR anticodon binding domain AOD59_10820 SM01016 Arginyl tRNA synthetase N terminal dom AOD59_10870 SM00327 von Willebrand factor (vWF) type A domain AOD59_10885 SM00382 ATPases associated with a variety of cellular activities AOD59_10930 SM00857 Resolvase, N terminal domain AOD59_10990 SM00448 cheY-homologous receiver domain AOD59_10990 SM00862 Transcriptional regulatory protein, C terminal AOD59_10995 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD59_10995 SM00387 Histidine kinase-like ATPases AOD59_10995 SM00388 His Kinase A (phosphoacceptor) domain AOD59_11070 SM00382 ATPases associated with a variety of cellular activities AOD59_11130 SM00563 Phosphate acyltransferases AOD59_11240 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AOD59_11245 SM00421 helix_turn_helix, Lux Regulon AOD59_11245 SM00448 cheY-homologous receiver domain AOD59_11260 SM00829 Enoylreductase AOD59_11325 SM00382 ATPases associated with a variety of cellular activities AOD59_11365 SM01091 Transporter associated domain AOD59_11380 SM00387 Histidine kinase-like ATPases AOD59_11380 SM00388 His Kinase A (phosphoacceptor) domain AOD59_11395 SM00882 Coenzyme A transferase AOD59_11400 SM00882 Coenzyme A transferase AOD59_11415 SM00382 ATPases associated with a variety of cellular activities AOD59_11455 SM00219 Tyrosine kinase, catalytic domain AOD59_11465 SM00014 Acid phosphatase homologues AOD59_11485 SM00860 SMI1 / KNR4 family AOD59_11510 SM00530 Helix-turn-helix XRE-family like proteins AOD59_11570 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. AOD59_11720 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOD59_11760 SM00823 Phosphopantetheine attachment site AOD59_11760 SM00824 Thioesterase AOD59_11765 SM00923 MbtH-like protein AOD59_11785 SM00411 bacterial (prokaryotic) histone like domain AOD59_11830 SM00363 S4 RNA-binding domain AOD59_11835 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AOD59_11890 SM00849 Metallo-beta-lactamase superfamily AOD59_11920 SM00849 Metallo-beta-lactamase superfamily AOD59_11940 SM01059 Chloramphenicol acetyltransferase AOD59_11965 SM00530 Helix-turn-helix XRE-family like proteins AOD59_12005 SM00357 Cold shock protein domain AOD59_12075 SM00859 Semialdehyde dehydrogenase, NAD binding domain AOD59_12110 SM00382 ATPases associated with a variety of cellular activities AOD59_12115 SM00382 ATPases associated with a variety of cellular activities AOD59_12125 SM00646 AOD59_12125 AOD59_12135 SM00530 Helix-turn-helix XRE-family like proteins AOD59_12150 SM00835 Cupin AOD59_12220 SM01207 AOD59_12220 AOD59_12245 SM00849 Metallo-beta-lactamase superfamily AOD59_12260 SM00487 DEAD-like helicases superfamily AOD59_12260 SM00490 helicase superfamily c-terminal domain AOD59_12290 SM00382 ATPases associated with a variety of cellular activities AOD59_12315 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD59_12320 SM00855 Phosphoglycerate mutase family AOD59_12395 SM00014 Acid phosphatase homologues AOD59_12400 SM00354 helix_turn _helix lactose operon repressor AOD59_12480 SM00530 Helix-turn-helix XRE-family like proteins AOD59_12505 SM00646 AOD59_12505 AOD59_12520 SM00382 ATPases associated with a variety of cellular activities AOD59_12530 SM00052 Putative diguanylate phosphodiesterase AOD59_12530 SM00091 PAS domain AOD59_12530 SM00267 diguanylate cyclase AOD59_12540 SM00860 SMI1 / KNR4 family AOD59_12550 SM00450 Rhodanese Homology Domain AOD59_12550 SM00849 Metallo-beta-lactamase superfamily AOD59_12565 SM00382 ATPases associated with a variety of cellular activities AOD59_12595 SM00878 Biotin carboxylase C-terminal domain AOD59_12660 SM00387 Histidine kinase-like ATPases AOD59_12660 SM00388 His Kinase A (phosphoacceptor) domain AOD59_12665 SM00448 cheY-homologous receiver domain AOD59_12665 SM00862 Transcriptional regulatory protein, C terminal AOD59_12720 SM00382 ATPases associated with a variety of cellular activities AOD59_12740 SM00422 helix_turn_helix, mercury resistance AOD59_12740 SM00871 Bacterial transcription activator, effector binding domain AOD59_12770 SM00342 helix_turn_helix, arabinose operon control protein AOD59_12785 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD59_12845 SM00448 cheY-homologous receiver domain AOD59_12845 SM00862 Transcriptional regulatory protein, C terminal AOD59_12875 SM00382 ATPases associated with a variety of cellular activities AOD59_12905 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD59_12910 SM01209 AOD59_12910 AOD59_13035 SM00091 PAS domain AOD59_13035 SM00387 Histidine kinase-like ATPases AOD59_13035 SM00388 His Kinase A (phosphoacceptor) domain AOD59_13060 SM00382 ATPases associated with a variety of cellular activities AOD59_13070 SM00387 Histidine kinase-like ATPases AOD59_13070 SM00388 His Kinase A (phosphoacceptor) domain AOD59_13085 SM00829 Enoylreductase AOD59_13090 SM00740 AOD59_13090 AOD59_13160 SM00422 helix_turn_helix, mercury resistance AOD59_13255 SM00480 DNA polymerase III beta subunit AOD59_13365 SM00465 GIY-YIG type nucleases (URI domain) AOD59_13465 SM00642 Alpha-amylase domain AOD59_13485 SM00871 Bacterial transcription activator, effector binding domain AOD59_13505 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD59_13620 SM00382 ATPases associated with a variety of cellular activities AOD59_13640 SM00420 helix_turn_helix, Deoxyribose operon repressor AOD59_13640 SM01134 AOD59_13640 AOD59_13685 SM00861 Transketolase, pyrimidine binding domain AOD59_13745 SM00116 Domain in cystathionine beta-synthase and other proteins. AOD59_13745 SM00382 ATPases associated with a variety of cellular activities AOD59_13780 SM00060 Fibronectin type 3 domain AOD59_13780 SM00495 Chitin-binding domain type 3 AOD59_13825 SM00849 Metallo-beta-lactamase superfamily AOD59_13895 SM00341 Helicase and RNase D C-terminal AOD59_13895 SM00487 DEAD-like helicases superfamily AOD59_13895 SM00490 helicase superfamily c-terminal domain AOD59_13895 SM00956 AOD59_13895 AOD59_13945 SM01131 AOD59_13945 AOD59_13975 SM01130 AOD59_13975 AOD59_13995 SM00091 PAS domain AOD59_13995 SM00382 ATPases associated with a variety of cellular activities AOD59_14065 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AOD59_14105 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AOD59_14110 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD59_14110 SM00387 Histidine kinase-like ATPases AOD59_14110 SM00388 His Kinase A (phosphoacceptor) domain AOD59_14115 SM00448 cheY-homologous receiver domain AOD59_14115 SM00862 Transcriptional regulatory protein, C terminal AOD59_14305 SM00382 ATPases associated with a variety of cellular activities AOD59_14380 SM00062 Bacterial periplasmic substrate-binding proteins AOD59_14385 SM00382 ATPases associated with a variety of cellular activities AOD59_14415 SM00028 Tetratricopeptide repeats AOD59_14505 SM00382 ATPases associated with a variety of cellular activities AOD59_14560 SM00830 Chorismate mutase type II AOD59_14595 SM00287 Bacterial SH3 domain homologues AOD59_14645 SM00382 ATPases associated with a variety of cellular activities AOD59_14665 SM01133 AOD59_14665 AOD59_14695 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOD59_14715 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AOD59_14730 SM00346 helix_turn_helix isocitrate lyase regulation AOD59_14750 SM00098 Alkaline phosphatase homologues AOD59_14760 SM00530 Helix-turn-helix XRE-family like proteins AOD59_14785 SM00850 LytTr DNA-binding domain AOD59_14885 SM01060 AOD59_14885 AOD59_14935 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD59_14940 SM00889 Elongation factor G, domain IV AOD59_14965 SM00382 ATPases associated with a variety of cellular activities AOD59_14970 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD59_14980 SM00382 ATPases associated with a variety of cellular activities AOD59_15005 SM00342 helix_turn_helix, arabinose operon control protein AOD59_15005 SM00871 Bacterial transcription activator, effector binding domain AOD59_15030 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD59_15050 SM00387 Histidine kinase-like ATPases AOD59_15050 SM00388 His Kinase A (phosphoacceptor) domain AOD59_15055 SM00448 cheY-homologous receiver domain AOD59_15055 SM00862 Transcriptional regulatory protein, C terminal AOD59_15200 SM00796 Allophanate hydrolase subunit 1 AOD59_15205 SM00346 helix_turn_helix isocitrate lyase regulation AOD59_15225 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOD59_15290 SM00849 Metallo-beta-lactamase superfamily AOD59_15370 SM00870 AOD59_15370 AOD59_15375 SM00530 Helix-turn-helix XRE-family like proteins AOD59_15410 SM00919 Malic enzyme, NAD binding domain AOD59_15410 SM01274 AOD59_15410 AOD59_15440 SM00448 cheY-homologous receiver domain AOD59_15485 SM01060 AOD59_15485 AOD59_15615 SM00382 ATPases associated with a variety of cellular activities AOD59_15640 SM00226 Low molecular weight phosphatase family AOD59_15655 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOD59_15665 SM00028 Tetratricopeptide repeats AOD59_15685 SM00344 helix_turn_helix ASNC type AOD59_15720 SM00342 helix_turn_helix, arabinose operon control protein AOD59_15755 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD59_15795 SM00448 cheY-homologous receiver domain AOD59_15795 SM00862 Transcriptional regulatory protein, C terminal AOD59_15800 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD59_15800 SM00387 Histidine kinase-like ATPases AOD59_15800 SM00388 His Kinase A (phosphoacceptor) domain AOD59_15855 SM00530 Helix-turn-helix XRE-family like proteins AOD59_15905 SM00382 ATPases associated with a variety of cellular activities AOD59_15915 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOD59_15930 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD59_15930 SM00387 Histidine kinase-like ATPases AOD59_15930 SM00388 His Kinase A (phosphoacceptor) domain AOD59_15935 SM00448 cheY-homologous receiver domain AOD59_15935 SM00862 Transcriptional regulatory protein, C terminal AOD59_15945 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD59_16040 SM00354 helix_turn _helix lactose operon repressor AOD59_16045 SM00028 Tetratricopeptide repeats AOD59_16080 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOD59_16080 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD59_16080 SM00319 Homologues of the ligand binding domain of Tar AOD59_16100 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AOD59_16125 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOD59_16170 SM00344 helix_turn_helix ASNC type AOD59_16235 SM00342 helix_turn_helix, arabinose operon control protein AOD59_16250 SM00287 Bacterial SH3 domain homologues AOD59_16300 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD59_16325 SM00382 ATPases associated with a variety of cellular activities AOD59_16335 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOD59_16405 SM00382 ATPases associated with a variety of cellular activities AOD59_16450 SM00530 Helix-turn-helix XRE-family like proteins AOD59_16455 SM01207 AOD59_16455 AOD59_16515 SM00382 ATPases associated with a variety of cellular activities AOD59_16530 SM00530 Helix-turn-helix XRE-family like proteins AOD59_16590 SM01266 AOD59_16590 AOD59_16605 SM00382 ATPases associated with a variety of cellular activities AOD59_16655 SM00028 Tetratricopeptide repeats AOD59_16680 SM01091 Transporter associated domain AOD59_16685 SM00422 helix_turn_helix, mercury resistance AOD59_16725 SM01350 AOD59_16725 AOD59_16730 SM00861 Transketolase, pyrimidine binding domain AOD59_16745 SM00829 Enoylreductase AOD59_16760 SM00829 Enoylreductase AOD59_16780 SM01276 AOD59_16780 AOD59_16825 SM00914 AOD59_16825 AOD59_16860 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD59_16860 SM00866 AOD59_16860 AOD59_16895 SM00849 Metallo-beta-lactamase superfamily AOD59_16960 SM00248 ankyrin repeats AOD59_16965 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOD59_17005 SM00871 Bacterial transcription activator, effector binding domain AOD59_17025 SM00382 ATPases associated with a variety of cellular activities AOD59_17050 SM00849 Metallo-beta-lactamase superfamily AOD59_17055 SM00641 Glycosyl hydrolases family 25 AOD59_17120 SM00849 Metallo-beta-lactamase superfamily AOD59_17255 SM00829 Enoylreductase AOD59_17260 SM00855 Phosphoglycerate mutase family AOD59_17270 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AOD59_17270 SM00534 ATPase domain of DNA mismatch repair MUTS family AOD59_17280 SM00642 Alpha-amylase domain AOD59_17350 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOD59_17355 SM00829 Enoylreductase AOD59_17440 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AOD59_17485 SM00479 AOD59_17485 AOD59_17490 SM00357 Cold shock protein domain AOD59_17515 SM01022 AOD59_17515 AOD59_17625 SM00852 Probable molybdopterin binding domain AOD59_17640 SM00729 Elongator protein 3, MiaB family, Radical SAM AOD59_17660 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AOD59_17660 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AOD59_17770 SM00382 ATPases associated with a variety of cellular activities AOD59_17785 SM00434 DNA Topoisomerase IV AOD59_17790 SM00387 Histidine kinase-like ATPases AOD59_17790 SM00433 TopoisomeraseII AOD59_17800 SM00881 CoA binding domain AOD59_17805 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AOD59_17810 SM00448 cheY-homologous receiver domain AOD59_17810 SM00862 Transcriptional regulatory protein, C terminal AOD59_17825 SM01207 AOD59_17825 AOD59_17840 SM00257 Lysin motif AOD59_17840 SM00636 AOD59_17840 AOD59_17860 SM00479 AOD59_17860 AOD59_17875 SM00382 ATPases associated with a variety of cellular activities AOD59_17920 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AOD59_17985 SM00644 AOD59_17985 AOD59_17985 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. AOD59_17990 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AOD59_18005 SM00091 PAS domain AOD59_18005 SM00387 Histidine kinase-like ATPases AOD59_18005 SM00388 His Kinase A (phosphoacceptor) domain AOD59_18035 SM01058 CarD-like/TRCF domain AOD59_18170 SM00644 AOD59_18170 AOD59_18185 SM00382 ATPases associated with a variety of cellular activities AOD59_18190 SM00382 ATPases associated with a variety of cellular activities AOD59_18205 SM00861 Transketolase, pyrimidine binding domain AOD59_18230 SM00382 ATPases associated with a variety of cellular activities AOD59_18235 SM00062 Bacterial periplasmic substrate-binding proteins AOD59_18255 SM00857 Resolvase, N terminal domain AOD59_18280 SM00028 Tetratricopeptide repeats AOD59_18310 SM00287 Bacterial SH3 domain homologues AOD59_18310 SM00644 AOD59_18310 AOD59_18470 SM00530 Helix-turn-helix XRE-family like proteins AOD59_18550 SM00382 ATPases associated with a variety of cellular activities AOD59_18600 SM00530 Helix-turn-helix XRE-family like proteins AOD59_18605 SM00530 Helix-turn-helix XRE-family like proteins AOD59_18630 SM01230 AOD59_18630 AOD59_18635 SM00422 helix_turn_helix, mercury resistance AOD59_18655 SM00382 ATPases associated with a variety of cellular activities AOD59_18685 SM00287 Bacterial SH3 domain homologues AOD59_18700 SM00420 helix_turn_helix, Deoxyribose operon repressor AOD59_18700 SM01134 AOD59_18700 AOD59_18730 SM00636 AOD59_18730 AOD59_18745 SM00411 bacterial (prokaryotic) histone like domain AOD59_18775 SM00382 ATPases associated with a variety of cellular activities AOD59_18805 SM00342 helix_turn_helix, arabinose operon control protein AOD59_18815 SM00478 endonuclease III AOD59_18850 SM00052 Putative diguanylate phosphodiesterase AOD59_18850 SM00091 PAS domain AOD59_18850 SM00267 diguanylate cyclase AOD59_18880 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD59_18900 SM00148 Phospholipase C, catalytic domain (part); domain X AOD59_18910 SM00257 Lysin motif AOD59_18940 SM00387 Histidine kinase-like ATPases AOD59_18940 SM00388 His Kinase A (phosphoacceptor) domain AOD59_18945 SM00448 cheY-homologous receiver domain AOD59_18945 SM00862 Transcriptional regulatory protein, C terminal AOD59_18960 SM00382 ATPases associated with a variety of cellular activities AOD59_18965 SM00853 MutL C terminal dimerisation domain AOD59_18965 SM01340 AOD59_18965 AOD59_18970 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AOD59_18970 SM00534 ATPase domain of DNA mismatch repair MUTS family AOD59_18985 SM00729 Elongator protein 3, MiaB family, Radical SAM AOD59_19015 SM00322 K homology RNA-binding domain AOD59_19015 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOD59_19030 SM00852 Probable molybdopterin binding domain AOD59_19085 SM00382 ATPases associated with a variety of cellular activities AOD59_19095 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD59_19095 SM00866 AOD59_19095 AOD59_19100 SM00382 ATPases associated with a variety of cellular activities AOD59_19100 SM00843 AOD59_19100 AOD59_19115 SM00849 Metallo-beta-lactamase superfamily AOD59_19125 SM01130 AOD59_19125 AOD59_19135 SM00859 Semialdehyde dehydrogenase, NAD binding domain AOD59_19165 SM00316 Ribosomal protein S1-like RNA-binding domain AOD59_19165 SM00322 K homology RNA-binding domain AOD59_19170 SM01387 AOD59_19170 AOD59_19175 SM00904 Riboflavin kinase AOD59_19210 SM00316 Ribosomal protein S1-like RNA-binding domain AOD59_19210 SM00322 K homology RNA-binding domain AOD59_19220 SM00479 AOD59_19220 AOD59_19220 SM00481 DNA polymerase alpha chain like domain AOD59_19230 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AOD59_19275 SM00382 ATPases associated with a variety of cellular activities AOD59_19275 SM01086 C-terminal, D2-small domain, of ClpB protein AOD59_19295 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AOD59_19295 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AOD59_19295 SM00493 AOD59_19295 AOD59_19305 SM00881 CoA binding domain AOD59_19355 SM00382 ATPases associated with a variety of cellular activities AOD59_19355 SM00962 SRP54-type protein, GTPase domain AOD59_19355 SM00963 SRP54-type protein, helical bundle domain AOD59_19365 SM00382 ATPases associated with a variety of cellular activities AOD59_19365 SM00962 SRP54-type protein, GTPase domain AOD59_19365 SM00963 SRP54-type protein, helical bundle domain AOD59_19370 SM00968 SMC proteins Flexible Hinge Domain AOD59_19375 SM00358 Double-stranded RNA binding motif AOD59_19375 SM00535 Ribonuclease III family AOD59_19385 SM00822 AOD59_19385 AOD59_19390 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AOD59_19405 SM00487 DEAD-like helicases superfamily AOD59_19405 SM00490 helicase superfamily c-terminal domain AOD59_19410 SM01120 AOD59_19410 AOD59_19410 SM01121 AOD59_19410 AOD59_19430 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain AOD59_19445 SM00220 Serine/Threonine protein kinases, catalytic domain AOD59_19445 SM00740 AOD59_19445 AOD59_19450 SM00331 Sigma factor PP2C-like phosphatases AOD59_19450 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AOD59_19475 SM00487 DEAD-like helicases superfamily AOD59_19475 SM00490 helicase superfamily c-terminal domain AOD59_19485 SM01409 AOD59_19485 AOD59_19490 SM00072 Guanylate kinase homologues. AOD59_19505 SM00831 Cation transporter/ATPase, N-terminus AOD59_19550 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AOD59_19565 SM00851 MGS-like domain AOD59_19565 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AOD59_19565 SM01209 AOD59_19565 AOD59_19570 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AOD59_19595 SM00363 S4 RNA-binding domain AOD59_19620 SM00363 S4 RNA-binding domain AOD59_19665 SM00864 Tubulin/FtsZ family, GTPase domain AOD59_19665 SM00865 Tubulin/FtsZ family, C-terminal domain AOD59_19670 SM00842 Cell division protein FtsA AOD59_19710 SM00740 AOD59_19710 AOD59_19715 SM00740 AOD59_19715 AOD59_19745 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains AOD59_19785 SM00530 Helix-turn-helix XRE-family like proteins AOD59_19800 SM00644 AOD59_19800 AOD59_19910 SM00507 HNH nucleases AOD59_19955 SM00530 Helix-turn-helix XRE-family like proteins AOD59_20025 SM00382 ATPases associated with a variety of cellular activities AOD59_20050 SM00530 Helix-turn-helix XRE-family like proteins AOD59_20055 SM00530 Helix-turn-helix XRE-family like proteins AOD59_20065 SM00530 Helix-turn-helix XRE-family like proteins AOD59_20090 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AOD59_20130 SM00855 Phosphoglycerate mutase family AOD59_20195 SM00878 Biotin carboxylase C-terminal domain AOD59_20215 SM00670 Large family of predicted nucleotide-binding domains AOD59_20240 SM00838 Elongation factor G C-terminus AOD59_20320 SM00861 Transketolase, pyrimidine binding domain AOD59_20350 SM00849 Metallo-beta-lactamase superfamily AOD59_20415 SM00052 Putative diguanylate phosphodiesterase AOD59_20510 SM00387 Histidine kinase-like ATPases AOD59_20510 SM00388 His Kinase A (phosphoacceptor) domain AOD59_20525 SM00354 helix_turn _helix lactose operon repressor AOD59_20545 SM00642 Alpha-amylase domain AOD59_20550 SM00642 Alpha-amylase domain AOD59_20555 SM00382 ATPases associated with a variety of cellular activities AOD59_20590 SM00382 ATPases associated with a variety of cellular activities AOD59_20680 SM01007 Class II Aldolase and Adducin N-terminal domain AOD59_20705 SM00267 diguanylate cyclase AOD59_20740 SM01061 CAT RNA binding domain AOD59_20750 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD59_20750 SM00866 AOD59_20750 AOD59_20765 SM00849 Metallo-beta-lactamase superfamily AOD59_20870 SM00387 Histidine kinase-like ATPases AOD59_20880 SM00936 Penicillin-binding protein 5, C-terminal domain AOD59_20885 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD59_20890 SM00382 ATPases associated with a variety of cellular activities AOD59_20910 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD59_20930 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AOD59_21025 SM00354 helix_turn _helix lactose operon repressor AOD59_21045 SM00704 CDGSH-type zinc finger. Function unknown. AOD59_21075 SM00729 Elongator protein 3, MiaB family, Radical SAM AOD59_21075 SM00876 Biotin and Thiamin Synthesis associated domain AOD59_21125 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD59_21160 SM00859 Semialdehyde dehydrogenase, NAD binding domain AOD59_21205 SM00849 Metallo-beta-lactamase superfamily AOD59_21255 SM00382 ATPases associated with a variety of cellular activities AOD59_21265 SM00062 Bacterial periplasmic substrate-binding proteins AOD59_21265 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AOD59_21300 SM00861 Transketolase, pyrimidine binding domain AOD59_21320 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AOD59_21335 SM00091 PAS domain AOD59_21335 SM00382 ATPases associated with a variety of cellular activities AOD59_21360 SM00448 cheY-homologous receiver domain AOD59_21370 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AOD59_21385 SM00363 S4 RNA-binding domain AOD59_21390 SM00861 Transketolase, pyrimidine binding domain AOD59_21425 SM00878 Biotin carboxylase C-terminal domain AOD59_21475 SM00382 ATPases associated with a variety of cellular activities AOD59_21495 SM00841 Elongation factor P, C-terminal AOD59_21495 SM01185 AOD59_21495 AOD59_21530 SM00529 Helix-turn-helix diphteria tox regulatory element AOD59_21550 SM00450 Rhodanese Homology Domain AOD59_21555 SM00354 helix_turn _helix lactose operon repressor AOD59_21610 SM00382 ATPases associated with a variety of cellular activities AOD59_21615 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD59_21645 SM00487 DEAD-like helicases superfamily AOD59_21645 SM00490 helicase superfamily c-terminal domain AOD59_21680 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AOD59_21715 SM00382 ATPases associated with a variety of cellular activities AOD59_21770 SM01018 B12 binding domain AOD59_21805 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOD59_21815 SM00849 Metallo-beta-lactamase superfamily AOD59_21855 SM00382 ATPases associated with a variety of cellular activities AOD59_21920 SM00382 ATPases associated with a variety of cellular activities AOD59_21935 SM00518 AP endonuclease family 2 AOD59_21940 SM00487 DEAD-like helicases superfamily AOD59_21940 SM00490 helicase superfamily c-terminal domain AOD59_21975 SM00400 zinc finger AOD59_21975 SM00493 AOD59_21975 AOD59_21975 SM00766 DNA primase DnaG DnaB-binding AOD59_21995 SM00116 Domain in cystathionine beta-synthase and other proteins. AOD59_22030 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOD59_22065 SM00729 Elongator protein 3, MiaB family, Radical SAM AOD59_22080 SM00271 DnaJ molecular chaperone homology domain AOD59_22100 SM00729 Elongator protein 3, MiaB family, Radical SAM AOD59_22110 SM00838 Elongation factor G C-terminus AOD59_22140 SM00849 Metallo-beta-lactamase superfamily AOD59_22150 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AOD59_22170 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOD59_22180 SM01103 AOD59_22180 AOD59_22235 SM00954 Region found in RelA / SpoT proteins AOD59_22245 SM00098 Alkaline phosphatase homologues AOD59_22270 SM00855 Phosphoglycerate mutase family AOD59_22320 SM00530 Helix-turn-helix XRE-family like proteins AOD59_22345 SM00382 ATPases associated with a variety of cellular activities AOD59_22440 SM00732 Likely ribonuclease with RNase H fold. AOD59_22450 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AOD59_22485 SM00028 Tetratricopeptide repeats AOD59_22505 SM00382 ATPases associated with a variety of cellular activities AOD59_22540 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOD59_22540 SM00954 Region found in RelA / SpoT proteins AOD59_22585 SM01323 AOD59_22585 AOD59_22605 SM00382 ATPases associated with a variety of cellular activities AOD59_22610 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AOD59_22635 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOD59_22650 SM00257 Lysin motif AOD59_22700 SM00382 ATPases associated with a variety of cellular activities AOD59_22705 SM00387 Histidine kinase-like ATPases AOD59_22715 SM00448 cheY-homologous receiver domain AOD59_22715 SM00862 Transcriptional regulatory protein, C terminal AOD59_22725 SM01317 AOD59_22725 AOD59_22815 SM00257 Lysin motif AOD59_22825 SM01004 Delta-aminolevulinic acid dehydratase AOD59_22850 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD59_22865 SM00382 ATPases associated with a variety of cellular activities AOD59_22865 SM00464 Found in ATP-dependent protease La (LON) AOD59_22870 SM00382 ATPases associated with a variety of cellular activities AOD59_22875 SM00382 ATPases associated with a variety of cellular activities AOD59_22875 SM00994 ClpX C4-type zinc finger AOD59_22875 SM01086 C-terminal, D2-small domain, of ClpB protein AOD59_22935 SM00909 Sporulation and spore germination AOD59_22970 SM00421 helix_turn_helix, Lux Regulon AOD59_23010 SM00382 ATPases associated with a variety of cellular activities AOD59_23015 SM00382 ATPases associated with a variety of cellular activities AOD59_23025 SM00342 helix_turn_helix, arabinose operon control protein AOD59_23025 SM00448 cheY-homologous receiver domain AOD59_23045 SM00530 Helix-turn-helix XRE-family like proteins AOD59_23070 SM00382 ATPases associated with a variety of cellular activities AOD59_23120 SM00465 GIY-YIG type nucleases (URI domain) AOD59_23130 SM00893 Electron transfer flavoprotein domain AOD59_23135 SM00893 Electron transfer flavoprotein domain AOD59_23200 SM00382 ATPases associated with a variety of cellular activities AOD59_23205 SM00387 Histidine kinase-like ATPases AOD59_23205 SM00388 His Kinase A (phosphoacceptor) domain AOD59_23210 SM00448 cheY-homologous receiver domain AOD59_23210 SM00862 Transcriptional regulatory protein, C terminal AOD59_23225 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AOD59_23245 SM00382 ATPases associated with a variety of cellular activities AOD59_23260 SM00725 NEAr Transporter domain AOD59_23265 SM00725 NEAr Transporter domain AOD59_23270 SM00725 NEAr Transporter domain AOD59_23280 SM00363 S4 RNA-binding domain AOD59_23290 SM00463 Small MutS-related domain AOD59_23290 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AOD59_23290 SM00534 ATPase domain of DNA mismatch repair MUTS family AOD59_23295 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AOD59_23295 SM00481 DNA polymerase alpha chain like domain AOD59_23295 SM00483 DNA polymerase X family AOD59_23335 SM00873 B3/4 domain AOD59_23335 SM00874 tRNA synthetase B5 domain AOD59_23335 SM00896 Ferredoxin-fold anticodon binding domain AOD59_23345 SM00967 RNA 2'-O ribose methyltransferase substrate binding AOD59_23420 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AOD59_23430 SM00382 ATPases associated with a variety of cellular activities AOD59_23450 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AOD59_23465 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AOD59_23465 SM01232 AOD59_23465 AOD59_23470 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AOD59_23470 SM00474 3'-5' exonuclease AOD59_23470 SM00475 5'-3' exonuclease AOD59_23470 SM00482 DNA polymerase A domain AOD59_23475 SM00091 PAS domain AOD59_23475 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD59_23475 SM00387 Histidine kinase-like ATPases AOD59_23475 SM00388 His Kinase A (phosphoacceptor) domain AOD59_23480 SM00448 cheY-homologous receiver domain AOD59_23480 SM00862 Transcriptional regulatory protein, C terminal AOD59_23500 SM01329 AOD59_23500 AOD59_23550 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD59_23555 SM00919 Malic enzyme, NAD binding domain AOD59_23555 SM01274 AOD59_23555 AOD59_23560 SM00481 DNA polymerase alpha chain like domain AOD59_23595 SM00116 Domain in cystathionine beta-synthase and other proteins. AOD59_23605 SM00849 Metallo-beta-lactamase superfamily AOD59_23660 SM00530 Helix-turn-helix XRE-family like proteins AOD59_23670 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AOD59_23670 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AOD59_23790 SM00981 AOD59_23790 AOD59_23830 SM00363 S4 RNA-binding domain AOD59_23830 SM01390 AOD59_23830 AOD59_23845 SM00363 S4 RNA-binding domain AOD59_23875 SM00116 Domain in cystathionine beta-synthase and other proteins. AOD59_23890 SM00448 cheY-homologous receiver domain AOD59_23890 SM00862 Transcriptional regulatory protein, C terminal AOD59_23895 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD59_23895 SM00387 Histidine kinase-like ATPases AOD59_23895 SM00388 His Kinase A (phosphoacceptor) domain AOD59_23900 SM00248 ankyrin repeats AOD59_23935 SM00354 helix_turn _helix lactose operon repressor AOD59_23995 SM00843 AOD59_23995 AOD59_24035 SM00849 Metallo-beta-lactamase superfamily AOD59_24055 SM00642 Alpha-amylase domain AOD59_24080 SM00420 helix_turn_helix, Deoxyribose operon repressor AOD59_24085 SM00363 S4 RNA-binding domain AOD59_24105 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOD59_24130 SM01058 CarD-like/TRCF domain AOD59_24165 SM00852 Probable molybdopterin binding domain AOD59_24200 SM00450 Rhodanese Homology Domain AOD59_24280 SM00382 ATPases associated with a variety of cellular activities AOD59_24300 SM00729 Elongator protein 3, MiaB family, Radical SAM AOD59_24310 SM00382 ATPases associated with a variety of cellular activities AOD59_24350 SM00014 Acid phosphatase homologues AOD59_24365 SM00852 Probable molybdopterin binding domain AOD59_24425 SM00387 Histidine kinase-like ATPases AOD59_24430 SM00387 Histidine kinase-like ATPases AOD59_24430 SM00388 His Kinase A (phosphoacceptor) domain AOD59_24460 SM00382 ATPases associated with a variety of cellular activities AOD59_24515 SM01234 AOD59_24515 AOD59_24520 SM00947 Carbonic anhydrase AOD59_24540 SM00894 Excalibur calcium-binding domain AOD59_24600 SM00899 AOD59_24600 AOD59_24610 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD59_24610 SM00387 Histidine kinase-like ATPases AOD59_24610 SM00388 His Kinase A (phosphoacceptor) domain AOD59_24615 SM00448 cheY-homologous receiver domain AOD59_24615 SM00862 Transcriptional regulatory protein, C terminal AOD59_24645 SM00046 Diacylglycerol kinase catalytic domain (presumed) AOD59_24695 SM00382 ATPases associated with a variety of cellular activities AOD59_24700 SM00342 helix_turn_helix, arabinose operon control protein AOD59_24700 SM00871 Bacterial transcription activator, effector binding domain AOD59_24705 SM00448 cheY-homologous receiver domain AOD59_24705 SM00862 Transcriptional regulatory protein, C terminal AOD59_24710 SM00387 Histidine kinase-like ATPases AOD59_24735 SM00382 ATPases associated with a variety of cellular activities AOD59_24755 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD59_24755 SM00866 AOD59_24755 AOD59_24795 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD59_24795 SM00387 Histidine kinase-like ATPases AOD59_24795 SM00388 His Kinase A (phosphoacceptor) domain AOD59_24800 SM00448 cheY-homologous receiver domain AOD59_24800 SM00862 Transcriptional regulatory protein, C terminal AOD59_24805 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AOD59_24845 SM00357 Cold shock protein domain AOD59_24885 SM00642 Alpha-amylase domain AOD59_25050 SM00316 Ribosomal protein S1-like RNA-binding domain AOD59_25060 SM00344 helix_turn_helix ASNC type AOD59_25095 SM01298 AOD59_25095 AOD59_25100 SM00479 AOD59_25100 AOD59_25195 SM00871 Bacterial transcription activator, effector binding domain AOD59_25255 SM00382 ATPases associated with a variety of cellular activities AOD59_25280 SM00860 SMI1 / KNR4 family AOD59_25350 SM00420 helix_turn_helix, Deoxyribose operon repressor AOD59_25390 SM00422 helix_turn_helix, mercury resistance AOD59_25405 SM00855 Phosphoglycerate mutase family AOD59_25415 SM00729 Elongator protein 3, MiaB family, Radical SAM AOD59_25480 SM00382 ATPases associated with a variety of cellular activities AOD59_25500 SM00382 ATPases associated with a variety of cellular activities AOD59_25500 SM00930 AOD59_25500 AOD59_25520 SM00493 AOD59_25520 AOD59_25605 SM00849 Metallo-beta-lactamase superfamily AOD59_25655 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOD59_25655 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD59_25725 SM00530 Helix-turn-helix XRE-family like proteins AOD59_25750 SM00448 cheY-homologous receiver domain AOD59_25750 SM00862 Transcriptional regulatory protein, C terminal AOD59_25755 SM00387 Histidine kinase-like ATPases AOD59_25755 SM00388 His Kinase A (phosphoacceptor) domain AOD59_25775 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOD59_25775 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD59_25795 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD59_25925 SM00363 S4 RNA-binding domain AOD59_25935 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain AOD59_25940 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOD59_25990 SM00382 ATPases associated with a variety of cellular activities AOD59_26010 SM00448 cheY-homologous receiver domain AOD59_26010 SM00862 Transcriptional regulatory protein, C terminal AOD59_26020 SM00316 Ribosomal protein S1-like RNA-binding domain AOD59_26020 SM00357 Cold shock protein domain AOD59_26020 SM00955 AOD59_26020 AOD59_26130 SM00507 HNH nucleases AOD59_26165 SM01192 AOD59_26165 AOD59_26165 SM01193 AOD59_26165 AOD59_26185 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AOD59_26285 SM00028 Tetratricopeptide repeats AOD59_26325 SM00487 DEAD-like helicases superfamily AOD59_26325 SM00490 helicase superfamily c-terminal domain AOD59_26345 SM00422 helix_turn_helix, mercury resistance AOD59_26365 SM00530 Helix-turn-helix XRE-family like proteins AOD59_26380 SM00422 helix_turn_helix, mercury resistance AOD59_26390 SM00382 ATPases associated with a variety of cellular activities AOD59_26400 SM00382 ATPases associated with a variety of cellular activities AOD59_26410 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AOD59_26410 SM00245 tail specific protease AOD59_26420 SM00382 ATPases associated with a variety of cellular activities AOD59_26435 SM00937 AOD59_26435 AOD59_26440 SM00957 SecA DEAD-like domain AOD59_26440 SM00958 SecA preprotein cross-linking domain AOD59_26450 SM00357 Cold shock protein domain AOD59_26460 SM00487 DEAD-like helicases superfamily AOD59_26460 SM00490 helicase superfamily c-terminal domain AOD59_26500 SM00984 UDP binding domain AOD59_26515 SM00382 ATPases associated with a variety of cellular activities AOD59_26520 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. AOD59_26705 SM00287 Bacterial SH3 domain homologues AOD59_26735 SM00487 DEAD-like helicases superfamily AOD59_26735 SM00490 helicase superfamily c-terminal domain AOD59_26780 SM00382 ATPases associated with a variety of cellular activities AOD59_26790 SM00530 Helix-turn-helix XRE-family like proteins AOD59_26815 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD59_26815 SM00387 Histidine kinase-like ATPases AOD59_26815 SM00388 His Kinase A (phosphoacceptor) domain AOD59_26820 SM00448 cheY-homologous receiver domain AOD59_26820 SM00862 Transcriptional regulatory protein, C terminal AOD59_26845 SM00287 Bacterial SH3 domain homologues AOD59_26845 SM00382 ATPases associated with a variety of cellular activities AOD59_26855 SM00984 UDP binding domain AOD59_26925 SM00382 ATPases associated with a variety of cellular activities AOD59_26930 SM00850 LytTr DNA-binding domain AOD59_27015 SM00052 Putative diguanylate phosphodiesterase AOD59_27015 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AOD59_27015 SM00091 PAS domain AOD59_27015 SM00267 diguanylate cyclase AOD59_27035 SM00382 ATPases associated with a variety of cellular activities AOD59_27105 SM00226 Low molecular weight phosphatase family AOD59_27120 SM00903 Flavin reductase like domain AOD59_27155 SM00937 AOD59_27155 AOD59_27170 SM00357 Cold shock protein domain AOD59_27170 SM00382 ATPases associated with a variety of cellular activities AOD59_27170 SM00959 Rho termination factor, N-terminal domain AOD59_27190 SM00448 cheY-homologous receiver domain AOD59_27240 SM00155 Phospholipase D. Active site motifs. AOD59_27250 SM00052 Putative diguanylate phosphodiesterase AOD59_27250 SM00267 diguanylate cyclase AOD59_27260 SM00530 Helix-turn-helix XRE-family like proteins AOD59_27265 SM00421 helix_turn_helix, Lux Regulon AOD59_27265 SM00448 cheY-homologous receiver domain AOD59_27270 SM00387 Histidine kinase-like ATPases AOD59_27280 SM00382 ATPases associated with a variety of cellular activities AOD59_27330 SM00836 DALR anticodon binding domain AOD59_27330 SM01016 Arginyl tRNA synthetase N terminal dom AOD59_27375 SM00422 helix_turn_helix, mercury resistance AOD59_27405 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOD59_27415 SM00382 ATPases associated with a variety of cellular activities AOD59_27465 SM00936 Penicillin-binding protein 5, C-terminal domain AOD59_27510 SM00986 Uracil DNA glycosylase superfamily AOD59_27510 SM00987 UreE urease accessory protein, C-terminal domain AOD59_27520 SM00382 ATPases associated with a variety of cellular activities AOD59_27530 SM00354 helix_turn _helix lactose operon repressor AOD59_27565 SM00100 Cyclic nucleotide-monophosphate binding domain AOD59_27575 SM00421 helix_turn_helix, Lux Regulon AOD59_27575 SM00448 cheY-homologous receiver domain AOD59_27590 SM00267 diguanylate cyclase AOD59_27605 SM00448 cheY-homologous receiver domain AOD59_27605 SM00850 LytTr DNA-binding domain AOD59_27635 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOD59_27660 SM00382 ATPases associated with a variety of cellular activities AOD59_27725 SM00448 cheY-homologous receiver domain AOD59_27725 SM00850 LytTr DNA-binding domain AOD59_27730 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AOD59_27730 SM00387 Histidine kinase-like ATPases AOD59_27785 SM00487 DEAD-like helicases superfamily AOD59_27785 SM00490 helicase superfamily c-terminal domain AOD59_27795 SM01240 AOD59_27795 AOD59_27820 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AOD59_27825 SM00849 Metallo-beta-lactamase superfamily AOD59_27840 SM00091 PAS domain AOD59_27840 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD59_27840 SM00387 Histidine kinase-like ATPases AOD59_27840 SM00388 His Kinase A (phosphoacceptor) domain AOD59_27845 SM00448 cheY-homologous receiver domain AOD59_27845 SM00862 Transcriptional regulatory protein, C terminal AOD59_27870 SM00788 Adenylosuccinate synthetase AOD59_27885 SM00267 diguanylate cyclase AOD59_27930 SM00470 ParB-like nuclease domain AOD59_27940 SM00470 ParB-like nuclease domain AOD59_27950 SM01228 AOD59_27950 AOD59_27960 SM00393 Putative single-stranded nucleic acids-binding domain AOD59_27960 SM01245 AOD59_27960