AOD60_00005 SM00382 ATPases associated with a variety of cellular activities AOD60_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain AOD60_00010 SM00480 DNA polymerase III beta subunit AOD60_00025 SM00387 Histidine kinase-like ATPases AOD60_00025 SM00433 TopoisomeraseII AOD60_00030 SM00434 DNA Topoisomerase IV AOD60_00065 SM00116 Domain in cystathionine beta-synthase and other proteins. AOD60_00065 SM01240 AOD60_00065 AOD60_00070 SM00936 Penicillin-binding protein 5, C-terminal domain AOD60_00125 SM00382 ATPases associated with a variety of cellular activities AOD60_00135 SM00493 AOD60_00135 AOD60_00220 SM00966 SpoVT / AbrB like domain AOD60_00235 SM00493 AOD60_00235 AOD60_00240 SM00650 Ribosomal RNA adenine dimethylases AOD60_00285 SM01400 AOD60_00285 AOD60_00300 SM00487 DEAD-like helicases superfamily AOD60_00300 SM00490 helicase superfamily c-terminal domain AOD60_00300 SM00982 AOD60_00300 AOD60_00300 SM01058 CarD-like/TRCF domain AOD60_00305 SM00966 SpoVT / AbrB like domain AOD60_00320 SM00363 S4 RNA-binding domain AOD60_00340 SM00316 Ribosomal protein S1-like RNA-binding domain AOD60_00355 SM00331 Sigma factor PP2C-like phosphatases AOD60_00355 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AOD60_00360 SM00977 TilS substrate C-terminal domain AOD60_00370 SM00382 ATPases associated with a variety of cellular activities AOD60_00410 SM00905 Dihydroneopterin aldolase AOD60_00420 SM00530 Helix-turn-helix XRE-family like proteins AOD60_00465 SM00382 ATPases associated with a variety of cellular activities AOD60_00465 SM01086 C-terminal, D2-small domain, of ClpB protein AOD60_00470 SM00382 ATPases associated with a variety of cellular activities AOD60_00480 SM00670 Large family of predicted nucleotide-binding domains AOD60_00505 SM00840 AOD60_00505 AOD60_00510 SM00535 Ribonuclease III family AOD60_00515 SM00967 RNA 2'-O ribose methyltransferase substrate binding AOD60_00525 SM00421 helix_turn_helix, Lux Regulon AOD60_00540 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AOD60_00545 SM00649 Ribosomal protein L11/L12 AOD60_00575 SM00663 RNA polymerase I subunit A N-terminus AOD60_00595 SM00838 Elongation factor G C-terminus AOD60_00595 SM00889 Elongation factor G, domain IV AOD60_00605 SM01403 AOD60_00605 AOD60_00625 SM01382 AOD60_00625 AOD60_00625 SM01383 AOD60_00625 AOD60_00640 SM00322 K homology RNA-binding domain AOD60_00660 SM01374 AOD60_00660 AOD60_00665 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AOD60_00725 SM00316 Ribosomal protein S1-like RNA-binding domain AOD60_00745 SM00662 RNA polymerases D AOD60_00755 SM00382 ATPases associated with a variety of cellular activities AOD60_00760 SM00382 ATPases associated with a variety of cellular activities AOD60_00790 SM00646 AOD60_00790 AOD60_00805 SM01251 AOD60_00805 AOD60_00925 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD60_00925 SM00895 AOD60_00925 AOD60_00940 SM01350 AOD60_00940 AOD60_00990 SM00382 ATPases associated with a variety of cellular activities AOD60_00990 SM00930 AOD60_00990 AOD60_01000 SM00829 Enoylreductase AOD60_01050 SM00382 ATPases associated with a variety of cellular activities AOD60_01055 SM00382 ATPases associated with a variety of cellular activities AOD60_01070 SM00342 helix_turn_helix, arabinose operon control protein AOD60_01165 SM00563 Phosphate acyltransferases AOD60_01175 SM00354 helix_turn _helix lactose operon repressor AOD60_01230 SM00382 ATPases associated with a variety of cellular activities AOD60_01260 SM00382 ATPases associated with a variety of cellular activities AOD60_01265 SM00382 ATPases associated with a variety of cellular activities AOD60_01325 SM00487 DEAD-like helicases superfamily AOD60_01325 SM00490 helicase superfamily c-terminal domain AOD60_01350 SM01005 Alanine racemase, C-terminal domain AOD60_01365 SM00316 Ribosomal protein S1-like RNA-binding domain AOD60_01365 SM00732 Likely ribonuclease with RNase H fold. AOD60_01375 SM00731 SprT homologues. AOD60_01480 SM00382 ATPases associated with a variety of cellular activities AOD60_01485 SM00881 CoA binding domain AOD60_01500 SM00883 Chaperonin 10 Kd subunit AOD60_01520 SM00448 cheY-homologous receiver domain AOD60_01520 SM00862 Transcriptional regulatory protein, C terminal AOD60_01525 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD60_01525 SM00387 Histidine kinase-like ATPases AOD60_01525 SM00388 His Kinase A (phosphoacceptor) domain AOD60_01605 SM00382 ATPases associated with a variety of cellular activities AOD60_01610 SM00387 Histidine kinase-like ATPases AOD60_01610 SM00388 His Kinase A (phosphoacceptor) domain AOD60_01615 SM00448 cheY-homologous receiver domain AOD60_01615 SM00862 Transcriptional regulatory protein, C terminal AOD60_01635 SM01001 AIR carboxylase AOD60_01645 SM00998 Adenylosuccinate lyase C-terminus AOD60_01660 SM01211 AOD60_01660 AOD60_01685 SM00798 AICARFT/IMPCHase bienzyme AOD60_01685 SM00851 MGS-like domain AOD60_01690 SM01209 AOD60_01690 AOD60_01690 SM01210 AOD60_01690 AOD60_01700 SM00244 prohibitin homologues AOD60_01720 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AOD60_01720 SM00292 breast cancer carboxy-terminal domain AOD60_01720 SM00532 Ligase N family AOD60_01750 SM00382 ATPases associated with a variety of cellular activities AOD60_01750 SM00930 AOD60_01750 AOD60_01780 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD60_01800 SM00845 GatB domain AOD60_01805 SM00046 Diacylglycerol kinase catalytic domain (presumed) AOD60_01820 SM00382 ATPases associated with a variety of cellular activities AOD60_01885 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AOD60_01930 SM01007 Class II Aldolase and Adducin N-terminal domain AOD60_02045 SM00062 Bacterial periplasmic substrate-binding proteins AOD60_02045 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AOD60_02050 SM00382 ATPases associated with a variety of cellular activities AOD60_02060 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOD60_02060 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD60_02065 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOD60_02065 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD60_02070 SM00642 Alpha-amylase domain AOD60_02090 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AOD60_02090 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AOD60_02090 SM00493 AOD60_02090 AOD60_02110 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOD60_02110 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD60_02130 SM00382 ATPases associated with a variety of cellular activities AOD60_02135 SM00382 ATPases associated with a variety of cellular activities AOD60_02140 SM00060 Fibronectin type 3 domain AOD60_02140 SM00636 AOD60_02140 AOD60_02140 SM00637 AOD60_02140 AOD60_02170 SM00530 Helix-turn-helix XRE-family like proteins AOD60_02195 SM00946 Prolyl-tRNA synthetase, C-terminal AOD60_02240 SM00831 Cation transporter/ATPase, N-terminus AOD60_02250 SM00226 Low molecular weight phosphatase family AOD60_02345 SM00478 endonuclease III AOD60_02360 SM00530 Helix-turn-helix XRE-family like proteins AOD60_02375 SM00530 Helix-turn-helix XRE-family like proteins AOD60_02380 SM00530 Helix-turn-helix XRE-family like proteins AOD60_02410 SM00382 ATPases associated with a variety of cellular activities AOD60_02645 SM00382 ATPases associated with a variety of cellular activities AOD60_02665 SM00530 Helix-turn-helix XRE-family like proteins AOD60_02725 SM00984 UDP binding domain AOD60_02810 SM00478 endonuclease III AOD60_02810 SM00525 AOD60_02810 AOD60_02835 SM00382 ATPases associated with a variety of cellular activities AOD60_02855 SM00382 ATPases associated with a variety of cellular activities AOD60_03010 SM00567 E-Z type HEAT repeats AOD60_03025 SM00052 Putative diguanylate phosphodiesterase AOD60_03025 SM00091 PAS domain AOD60_03025 SM00267 diguanylate cyclase AOD60_03035 SM00763 PrkA AAA domain AOD60_03050 SM00364 Leucine-rich repeats, bacterial type AOD60_03050 SM00365 Leucine-rich repeat, SDS22-like subfamily AOD60_03050 SM00369 Leucine-rich repeats, typical (most populated) subfamily AOD60_03050 SM00725 NEAr Transporter domain AOD60_03065 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AOD60_03075 SM00244 prohibitin homologues AOD60_03080 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOD60_03080 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD60_03085 SM00091 PAS domain AOD60_03085 SM00387 Histidine kinase-like ATPases AOD60_03110 SM00248 ankyrin repeats AOD60_03120 SM00382 ATPases associated with a variety of cellular activities AOD60_03145 SM00448 cheY-homologous receiver domain AOD60_03145 SM00862 Transcriptional regulatory protein, C terminal AOD60_03150 SM00387 Histidine kinase-like ATPases AOD60_03150 SM00388 His Kinase A (phosphoacceptor) domain AOD60_03165 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOD60_03165 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD60_03170 SM00387 Histidine kinase-like ATPases AOD60_03175 SM00448 cheY-homologous receiver domain AOD60_03185 SM00919 Malic enzyme, NAD binding domain AOD60_03185 SM01274 AOD60_03185 AOD60_03200 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD60_03210 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD60_03210 SM00387 Histidine kinase-like ATPases AOD60_03210 SM00388 His Kinase A (phosphoacceptor) domain AOD60_03215 SM00448 cheY-homologous receiver domain AOD60_03215 SM00862 Transcriptional regulatory protein, C terminal AOD60_03235 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AOD60_03235 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AOD60_03250 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AOD60_03250 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AOD60_03260 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOD60_03335 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOD60_03365 SM00382 ATPases associated with a variety of cellular activities AOD60_03390 SM00327 von Willebrand factor (vWF) type A domain AOD60_03395 SM00382 ATPases associated with a variety of cellular activities AOD60_03400 SM00155 Phospholipase D. Active site motifs. AOD60_03415 SM00052 Putative diguanylate phosphodiesterase AOD60_03415 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AOD60_03415 SM00091 PAS domain AOD60_03415 SM00267 diguanylate cyclase AOD60_03425 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD60_03425 SM00866 AOD60_03425 AOD60_03435 SM00642 Alpha-amylase domain AOD60_03470 SM00382 ATPases associated with a variety of cellular activities AOD60_03475 SM00062 Bacterial periplasmic substrate-binding proteins AOD60_03475 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AOD60_03525 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD60_03525 SM00387 Histidine kinase-like ATPases AOD60_03525 SM00388 His Kinase A (phosphoacceptor) domain AOD60_03530 SM00448 cheY-homologous receiver domain AOD60_03530 SM00862 Transcriptional regulatory protein, C terminal AOD60_03570 SM00382 ATPases associated with a variety of cellular activities AOD60_03585 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD60_03600 SM00354 helix_turn _helix lactose operon repressor AOD60_03615 SM00382 ATPases associated with a variety of cellular activities AOD60_03650 SM00829 Enoylreductase AOD60_03660 SM00770 Zinc dependent phospholipase C (alpha toxin) AOD60_03695 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOD60_03705 SM00530 Helix-turn-helix XRE-family like proteins AOD60_03750 SM00530 Helix-turn-helix XRE-family like proteins AOD60_03850 SM00899 AOD60_03850 AOD60_03990 SM00116 Domain in cystathionine beta-synthase and other proteins. AOD60_04010 SM00287 Bacterial SH3 domain homologues AOD60_04020 SM00382 ATPases associated with a variety of cellular activities AOD60_04110 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD60_04150 SM00640 Glycosyl hydrolases family 32 AOD60_04160 SM00354 helix_turn _helix lactose operon repressor AOD60_04230 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD60_04245 SM00450 Rhodanese Homology Domain AOD60_04255 SM00450 Rhodanese Homology Domain AOD60_04260 SM00450 Rhodanese Homology Domain AOD60_04260 SM00849 Metallo-beta-lactamase superfamily AOD60_04270 SM00450 Rhodanese Homology Domain AOD60_04275 SM00450 Rhodanese Homology Domain AOD60_04300 SM00829 Enoylreductase AOD60_04350 SM00287 Bacterial SH3 domain homologues AOD60_04360 SM00382 ATPases associated with a variety of cellular activities AOD60_04415 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen AOD60_04515 SM00344 helix_turn_helix ASNC type AOD60_04580 SM01060 AOD60_04580 AOD60_04615 SM00382 ATPases associated with a variety of cellular activities AOD60_04625 SM00062 Bacterial periplasmic substrate-binding proteins AOD60_04625 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AOD60_04635 SM00382 ATPases associated with a variety of cellular activities AOD60_04715 SM00729 Elongator protein 3, MiaB family, Radical SAM AOD60_04750 SM00957 SecA DEAD-like domain AOD60_04750 SM00958 SecA preprotein cross-linking domain AOD60_04765 SM00635 Bacterial Ig-like domain 2 AOD60_04825 SM00646 AOD60_04825 AOD60_04895 SM00382 ATPases associated with a variety of cellular activities AOD60_04910 SM00860 SMI1 / KNR4 family AOD60_04915 SM00860 SMI1 / KNR4 family AOD60_04930 SM00091 PAS domain AOD60_04930 SM00387 Histidine kinase-like ATPases AOD60_04935 SM00448 cheY-homologous receiver domain AOD60_04970 SM00422 helix_turn_helix, mercury resistance AOD60_05095 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD60_05165 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOD60_05185 SM00460 Transglutaminase/protease-like homologues AOD60_05250 SM00331 Sigma factor PP2C-like phosphatases AOD60_05250 SM00448 cheY-homologous receiver domain AOD60_05255 SM00138 Methyltransferase, chemotaxis proteins AOD60_05260 SM00387 Histidine kinase-like ATPases AOD60_05260 SM00388 His Kinase A (phosphoacceptor) domain AOD60_05260 SM00448 cheY-homologous receiver domain AOD60_05300 SM00829 Enoylreductase AOD60_05340 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOD60_05365 SM00028 Tetratricopeptide repeats AOD60_05435 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD60_05485 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD60_05500 SM00382 ATPases associated with a variety of cellular activities AOD60_05565 SM00422 helix_turn_helix, mercury resistance AOD60_05680 SM00849 Metallo-beta-lactamase superfamily AOD60_05705 SM00725 NEAr Transporter domain AOD60_05775 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOD60_05790 SM00342 helix_turn_helix, arabinose operon control protein AOD60_05790 SM00871 Bacterial transcription activator, effector binding domain AOD60_05805 SM00387 Histidine kinase-like ATPases AOD60_05805 SM00388 His Kinase A (phosphoacceptor) domain AOD60_05810 SM00448 cheY-homologous receiver domain AOD60_05810 SM00862 Transcriptional regulatory protein, C terminal AOD60_05840 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOD60_05840 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD60_05880 SM00357 Cold shock protein domain AOD60_05995 SM01060 AOD60_05995 AOD60_06010 SM00642 Alpha-amylase domain AOD60_06015 SM00530 Helix-turn-helix XRE-family like proteins AOD60_06025 SM00316 Ribosomal protein S1-like RNA-binding domain AOD60_06075 SM00382 ATPases associated with a variety of cellular activities AOD60_06075 SM01086 C-terminal, D2-small domain, of ClpB protein AOD60_06105 SM00825 Beta-ketoacyl synthase AOD60_06145 SM00382 ATPases associated with a variety of cellular activities AOD60_06150 SM00382 ATPases associated with a variety of cellular activities AOD60_06190 SM00155 Phospholipase D. Active site motifs. AOD60_06220 SM01118 AOD60_06220 AOD60_06230 SM00954 Region found in RelA / SpoT proteins AOD60_06385 SM00635 Bacterial Ig-like domain 2 AOD60_06500 SM00861 Transketolase, pyrimidine binding domain AOD60_06505 SM00530 Helix-turn-helix XRE-family like proteins AOD60_06600 SM00530 Helix-turn-helix XRE-family like proteins AOD60_06620 SM00382 ATPases associated with a variety of cellular activities AOD60_06640 SM00014 Acid phosphatase homologues AOD60_06690 SM00448 cheY-homologous receiver domain AOD60_06690 SM00862 Transcriptional regulatory protein, C terminal AOD60_06695 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD60_06695 SM00387 Histidine kinase-like ATPases AOD60_06695 SM00388 His Kinase A (phosphoacceptor) domain AOD60_06700 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD60_06700 SM00895 AOD60_06700 AOD60_06770 SM00822 AOD60_06770 AOD60_06835 SM00420 helix_turn_helix, Deoxyribose operon repressor AOD60_06835 SM01134 AOD60_06835 AOD60_06870 SM00387 Histidine kinase-like ATPases AOD60_06870 SM00388 His Kinase A (phosphoacceptor) domain AOD60_06875 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD60_06895 SM00387 Histidine kinase-like ATPases AOD60_06895 SM00388 His Kinase A (phosphoacceptor) domain AOD60_06965 SM00465 GIY-YIG type nucleases (URI domain) AOD60_06965 SM00496 Intron-encoded nuclease repeat 2 AOD60_06980 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD60_06985 SM00382 ATPases associated with a variety of cellular activities AOD60_06995 SM00382 ATPases associated with a variety of cellular activities AOD60_07015 SM00344 helix_turn_helix ASNC type AOD60_07135 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD60_07210 SM00917 LeuA allosteric (dimerisation) domain AOD60_07215 SM01329 AOD60_07215 AOD60_07400 SM00387 Histidine kinase-like ATPases AOD60_07405 SM00421 helix_turn_helix, Lux Regulon AOD60_07405 SM00448 cheY-homologous receiver domain AOD60_07500 SM00091 PAS domain AOD60_07500 SM00388 His Kinase A (phosphoacceptor) domain AOD60_07520 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD60_07520 SM00387 Histidine kinase-like ATPases AOD60_07520 SM00388 His Kinase A (phosphoacceptor) domain AOD60_07575 SM00363 S4 RNA-binding domain AOD60_07595 SM00448 cheY-homologous receiver domain AOD60_07595 SM00862 Transcriptional regulatory protein, C terminal AOD60_07600 SM00091 PAS domain AOD60_07600 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD60_07600 SM00387 Histidine kinase-like ATPases AOD60_07600 SM00388 His Kinase A (phosphoacceptor) domain AOD60_07610 SM00257 Lysin motif AOD60_07635 SM00487 DEAD-like helicases superfamily AOD60_07635 SM00490 helicase superfamily c-terminal domain AOD60_07645 SM00257 Lysin motif AOD60_07655 SM00422 helix_turn_helix, mercury resistance AOD60_07665 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AOD60_07680 SM00644 AOD60_07680 AOD60_07690 SM00870 AOD60_07690 AOD60_07705 SM00316 Ribosomal protein S1-like RNA-binding domain AOD60_07710 SM01240 AOD60_07710 AOD60_07765 SM00411 bacterial (prokaryotic) histone like domain AOD60_07790 SM00562 AOD60_07790 AOD60_07810 SM00028 Tetratricopeptide repeats AOD60_07815 SM00914 AOD60_07815 AOD60_07860 SM00986 Uracil DNA glycosylase superfamily AOD60_07860 SM00987 UreE urease accessory protein, C-terminal domain AOD60_07885 SM00851 MGS-like domain AOD60_07935 SM00479 AOD60_07935 AOD60_07935 SM00487 DEAD-like helicases superfamily AOD60_07935 SM00491 AOD60_07935 AOD60_07960 SM00478 endonuclease III AOD60_07960 SM00525 AOD60_07960 AOD60_07970 SM00060 Fibronectin type 3 domain AOD60_08020 SM00981 AOD60_08020 AOD60_08030 SM00491 AOD60_08030 AOD60_08090 SM00450 Rhodanese Homology Domain AOD60_08120 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AOD60_08120 SM00475 5'-3' exonuclease AOD60_08230 SM00357 Cold shock protein domain AOD60_08280 SM00849 Metallo-beta-lactamase superfamily AOD60_08285 SM00422 helix_turn_helix, mercury resistance AOD60_08285 SM00871 Bacterial transcription activator, effector binding domain AOD60_08375 SM00448 cheY-homologous receiver domain AOD60_08400 SM00138 Methyltransferase, chemotaxis proteins AOD60_08485 SM00382 ATPases associated with a variety of cellular activities AOD60_08550 SM00028 Tetratricopeptide repeats AOD60_08570 SM00028 Tetratricopeptide repeats AOD60_08655 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AOD60_08710 SM00530 Helix-turn-helix XRE-family like proteins AOD60_08730 SM00382 ATPases associated with a variety of cellular activities AOD60_08745 SM00849 Metallo-beta-lactamase superfamily AOD60_08745 SM01027 Beta-Casp domain AOD60_08765 SM00835 Cupin AOD60_08780 SM00855 Phosphoglycerate mutase family AOD60_08840 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD60_08840 SM00895 AOD60_08840 AOD60_08850 SM00833 Cobalamin synthesis protein cobW C-terminal domain AOD60_08940 SM00530 Helix-turn-helix XRE-family like proteins AOD60_08985 SM00421 helix_turn_helix, Lux Regulon AOD60_08985 SM00448 cheY-homologous receiver domain AOD60_08995 SM00382 ATPases associated with a variety of cellular activities AOD60_09010 SM00155 Phospholipase D. Active site motifs. AOD60_09030 SM00919 Malic enzyme, NAD binding domain AOD60_09030 SM01274 AOD60_09030 AOD60_09035 SM00387 Histidine kinase-like ATPases AOD60_09040 SM00448 cheY-homologous receiver domain AOD60_09045 SM00487 DEAD-like helicases superfamily AOD60_09045 SM00490 helicase superfamily c-terminal domain AOD60_09110 SM00646 AOD60_09110 AOD60_09115 SM00047 Lysozyme subfamily 2 AOD60_09290 SM00854 Bacterial capsule synthesis protein PGA_cap AOD60_09320 SM00850 LytTr DNA-binding domain AOD60_09375 SM00729 Elongator protein 3, MiaB family, Radical SAM AOD60_09385 SM00448 cheY-homologous receiver domain AOD60_09385 SM00862 Transcriptional regulatory protein, C terminal AOD60_09405 SM00450 Rhodanese Homology Domain AOD60_09455 SM01133 AOD60_09455 AOD60_09465 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AOD60_09500 SM01011 Aminopeptidase P, N-terminal domain AOD60_09510 SM00287 Bacterial SH3 domain homologues AOD60_09520 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AOD60_09520 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AOD60_09520 SM00493 AOD60_09520 AOD60_09615 SM00833 Cobalamin synthesis protein cobW C-terminal domain AOD60_09650 SM00382 ATPases associated with a variety of cellular activities AOD60_09655 SM00382 ATPases associated with a variety of cellular activities AOD60_09690 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD60_09710 SM00382 ATPases associated with a variety of cellular activities AOD60_09715 SM00382 ATPases associated with a variety of cellular activities AOD60_09750 SM00287 Bacterial SH3 domain homologues AOD60_09765 SM00382 ATPases associated with a variety of cellular activities AOD60_09770 SM00448 cheY-homologous receiver domain AOD60_09770 SM00862 Transcriptional regulatory protein, C terminal AOD60_09775 SM00387 Histidine kinase-like ATPases AOD60_09775 SM00388 His Kinase A (phosphoacceptor) domain AOD60_09855 SM00448 cheY-homologous receiver domain AOD60_09855 SM00862 Transcriptional regulatory protein, C terminal AOD60_09860 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD60_09860 SM00387 Histidine kinase-like ATPases AOD60_09860 SM00388 His Kinase A (phosphoacceptor) domain AOD60_09950 SM00460 Transglutaminase/protease-like homologues AOD60_09975 SM00966 SpoVT / AbrB like domain AOD60_09985 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOD60_10020 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOD60_10020 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD60_10085 SM00833 Cobalamin synthesis protein cobW C-terminal domain AOD60_10195 SM00855 Phosphoglycerate mutase family AOD60_10245 SM00155 Phospholipase D. Active site motifs. AOD60_10270 SM01091 Transporter associated domain AOD60_10345 SM00244 prohibitin homologues AOD60_10350 SM00855 Phosphoglycerate mutase family AOD60_10365 SM01005 Alanine racemase, C-terminal domain AOD60_10395 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD60_10510 SM00487 DEAD-like helicases superfamily AOD60_10510 SM00490 helicase superfamily c-terminal domain AOD60_10530 SM00829 Enoylreductase AOD60_10550 SM00849 Metallo-beta-lactamase superfamily AOD60_10565 SM00460 Transglutaminase/protease-like homologues AOD60_10590 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AOD60_10610 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD60_10615 SM00382 ATPases associated with a variety of cellular activities AOD60_10625 SM00100 Cyclic nucleotide-monophosphate binding domain AOD60_10625 SM00419 helix_turn_helix, cAMP Regulatory protein AOD60_10630 SM00729 Elongator protein 3, MiaB family, Radical SAM AOD60_10640 SM00852 Probable molybdopterin binding domain AOD60_10705 SM00894 Excalibur calcium-binding domain AOD60_10760 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOD60_10765 SM00382 ATPases associated with a variety of cellular activities AOD60_10800 SM00567 E-Z type HEAT repeats AOD60_10800 SM00932 Scaffold protein Nfu/NifU N terminal AOD60_10820 SM00836 DALR anticodon binding domain AOD60_10820 SM01016 Arginyl tRNA synthetase N terminal dom AOD60_10870 SM00327 von Willebrand factor (vWF) type A domain AOD60_10885 SM00382 ATPases associated with a variety of cellular activities AOD60_10930 SM00857 Resolvase, N terminal domain AOD60_10990 SM00448 cheY-homologous receiver domain AOD60_10990 SM00862 Transcriptional regulatory protein, C terminal AOD60_10995 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD60_10995 SM00387 Histidine kinase-like ATPases AOD60_10995 SM00388 His Kinase A (phosphoacceptor) domain AOD60_11070 SM00382 ATPases associated with a variety of cellular activities AOD60_11130 SM00563 Phosphate acyltransferases AOD60_11240 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AOD60_11245 SM00421 helix_turn_helix, Lux Regulon AOD60_11245 SM00448 cheY-homologous receiver domain AOD60_11260 SM00829 Enoylreductase AOD60_11325 SM00382 ATPases associated with a variety of cellular activities AOD60_11365 SM01091 Transporter associated domain AOD60_11380 SM00387 Histidine kinase-like ATPases AOD60_11380 SM00388 His Kinase A (phosphoacceptor) domain AOD60_11395 SM00882 Coenzyme A transferase AOD60_11400 SM00882 Coenzyme A transferase AOD60_11415 SM00382 ATPases associated with a variety of cellular activities AOD60_11455 SM00219 Tyrosine kinase, catalytic domain AOD60_11465 SM00014 Acid phosphatase homologues AOD60_11485 SM00860 SMI1 / KNR4 family AOD60_11510 SM00530 Helix-turn-helix XRE-family like proteins AOD60_11570 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. AOD60_11720 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOD60_11760 SM00823 Phosphopantetheine attachment site AOD60_11760 SM00824 Thioesterase AOD60_11765 SM00923 MbtH-like protein AOD60_11785 SM00411 bacterial (prokaryotic) histone like domain AOD60_11830 SM00363 S4 RNA-binding domain AOD60_11835 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AOD60_11890 SM00849 Metallo-beta-lactamase superfamily AOD60_11920 SM00849 Metallo-beta-lactamase superfamily AOD60_11940 SM01059 Chloramphenicol acetyltransferase AOD60_11965 SM00530 Helix-turn-helix XRE-family like proteins AOD60_12005 SM00357 Cold shock protein domain AOD60_12075 SM00859 Semialdehyde dehydrogenase, NAD binding domain AOD60_12110 SM00382 ATPases associated with a variety of cellular activities AOD60_12115 SM00382 ATPases associated with a variety of cellular activities AOD60_12125 SM00646 AOD60_12125 AOD60_12135 SM00530 Helix-turn-helix XRE-family like proteins AOD60_12150 SM00835 Cupin AOD60_12220 SM01207 AOD60_12220 AOD60_12245 SM00849 Metallo-beta-lactamase superfamily AOD60_12260 SM00487 DEAD-like helicases superfamily AOD60_12260 SM00490 helicase superfamily c-terminal domain AOD60_12290 SM00382 ATPases associated with a variety of cellular activities AOD60_12315 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD60_12320 SM00855 Phosphoglycerate mutase family AOD60_12395 SM00014 Acid phosphatase homologues AOD60_12400 SM00354 helix_turn _helix lactose operon repressor AOD60_12480 SM00530 Helix-turn-helix XRE-family like proteins AOD60_12505 SM00646 AOD60_12505 AOD60_12520 SM00382 ATPases associated with a variety of cellular activities AOD60_12530 SM00052 Putative diguanylate phosphodiesterase AOD60_12530 SM00091 PAS domain AOD60_12530 SM00267 diguanylate cyclase AOD60_12540 SM00860 SMI1 / KNR4 family AOD60_12550 SM00450 Rhodanese Homology Domain AOD60_12550 SM00849 Metallo-beta-lactamase superfamily AOD60_12565 SM00382 ATPases associated with a variety of cellular activities AOD60_12595 SM00878 Biotin carboxylase C-terminal domain AOD60_12660 SM00387 Histidine kinase-like ATPases AOD60_12660 SM00388 His Kinase A (phosphoacceptor) domain AOD60_12665 SM00448 cheY-homologous receiver domain AOD60_12665 SM00862 Transcriptional regulatory protein, C terminal AOD60_12720 SM00382 ATPases associated with a variety of cellular activities AOD60_12740 SM00422 helix_turn_helix, mercury resistance AOD60_12740 SM00871 Bacterial transcription activator, effector binding domain AOD60_12770 SM00342 helix_turn_helix, arabinose operon control protein AOD60_12785 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD60_12845 SM00448 cheY-homologous receiver domain AOD60_12845 SM00862 Transcriptional regulatory protein, C terminal AOD60_12875 SM00382 ATPases associated with a variety of cellular activities AOD60_12905 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD60_12910 SM01209 AOD60_12910 AOD60_13035 SM00091 PAS domain AOD60_13035 SM00387 Histidine kinase-like ATPases AOD60_13035 SM00388 His Kinase A (phosphoacceptor) domain AOD60_13060 SM00382 ATPases associated with a variety of cellular activities AOD60_13070 SM00387 Histidine kinase-like ATPases AOD60_13070 SM00388 His Kinase A (phosphoacceptor) domain AOD60_13085 SM00829 Enoylreductase AOD60_13090 SM00740 AOD60_13090 AOD60_13160 SM00422 helix_turn_helix, mercury resistance AOD60_13255 SM00480 DNA polymerase III beta subunit AOD60_13365 SM00465 GIY-YIG type nucleases (URI domain) AOD60_13465 SM00642 Alpha-amylase domain AOD60_13485 SM00871 Bacterial transcription activator, effector binding domain AOD60_13505 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD60_13620 SM00382 ATPases associated with a variety of cellular activities AOD60_13640 SM00420 helix_turn_helix, Deoxyribose operon repressor AOD60_13640 SM01134 AOD60_13640 AOD60_13685 SM00861 Transketolase, pyrimidine binding domain AOD60_13745 SM00116 Domain in cystathionine beta-synthase and other proteins. AOD60_13745 SM00382 ATPases associated with a variety of cellular activities AOD60_13780 SM00060 Fibronectin type 3 domain AOD60_13780 SM00495 Chitin-binding domain type 3 AOD60_13825 SM00849 Metallo-beta-lactamase superfamily AOD60_13895 SM00341 Helicase and RNase D C-terminal AOD60_13895 SM00487 DEAD-like helicases superfamily AOD60_13895 SM00490 helicase superfamily c-terminal domain AOD60_13895 SM00956 AOD60_13895 AOD60_13945 SM01131 AOD60_13945 AOD60_13975 SM01130 AOD60_13975 AOD60_13995 SM00091 PAS domain AOD60_13995 SM00382 ATPases associated with a variety of cellular activities AOD60_14065 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AOD60_14105 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AOD60_14110 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD60_14110 SM00387 Histidine kinase-like ATPases AOD60_14110 SM00388 His Kinase A (phosphoacceptor) domain AOD60_14115 SM00448 cheY-homologous receiver domain AOD60_14115 SM00862 Transcriptional regulatory protein, C terminal AOD60_14305 SM00382 ATPases associated with a variety of cellular activities AOD60_14380 SM00062 Bacterial periplasmic substrate-binding proteins AOD60_14385 SM00382 ATPases associated with a variety of cellular activities AOD60_14415 SM00028 Tetratricopeptide repeats AOD60_14505 SM00382 ATPases associated with a variety of cellular activities AOD60_14560 SM00830 Chorismate mutase type II AOD60_14595 SM00287 Bacterial SH3 domain homologues AOD60_14645 SM00382 ATPases associated with a variety of cellular activities AOD60_14665 SM01133 AOD60_14665 AOD60_14695 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOD60_14715 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AOD60_14730 SM00346 helix_turn_helix isocitrate lyase regulation AOD60_14750 SM00098 Alkaline phosphatase homologues AOD60_14760 SM00530 Helix-turn-helix XRE-family like proteins AOD60_14785 SM00850 LytTr DNA-binding domain AOD60_14885 SM01060 AOD60_14885 AOD60_14935 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD60_14940 SM00889 Elongation factor G, domain IV AOD60_14965 SM00382 ATPases associated with a variety of cellular activities AOD60_14970 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD60_14980 SM00382 ATPases associated with a variety of cellular activities AOD60_15005 SM00342 helix_turn_helix, arabinose operon control protein AOD60_15005 SM00871 Bacterial transcription activator, effector binding domain AOD60_15030 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD60_15050 SM00387 Histidine kinase-like ATPases AOD60_15050 SM00388 His Kinase A (phosphoacceptor) domain AOD60_15055 SM00448 cheY-homologous receiver domain AOD60_15055 SM00862 Transcriptional regulatory protein, C terminal AOD60_15200 SM00796 Allophanate hydrolase subunit 1 AOD60_15205 SM00346 helix_turn_helix isocitrate lyase regulation AOD60_15225 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOD60_15290 SM00849 Metallo-beta-lactamase superfamily AOD60_15370 SM00870 AOD60_15370 AOD60_15375 SM00530 Helix-turn-helix XRE-family like proteins AOD60_15410 SM00919 Malic enzyme, NAD binding domain AOD60_15410 SM01274 AOD60_15410 AOD60_15440 SM00448 cheY-homologous receiver domain AOD60_15485 SM01060 AOD60_15485 AOD60_15615 SM00382 ATPases associated with a variety of cellular activities AOD60_15640 SM00226 Low molecular weight phosphatase family AOD60_15655 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOD60_15665 SM00028 Tetratricopeptide repeats AOD60_15685 SM00344 helix_turn_helix ASNC type AOD60_15720 SM00342 helix_turn_helix, arabinose operon control protein AOD60_15755 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD60_15795 SM00448 cheY-homologous receiver domain AOD60_15795 SM00862 Transcriptional regulatory protein, C terminal AOD60_15800 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD60_15800 SM00387 Histidine kinase-like ATPases AOD60_15800 SM00388 His Kinase A (phosphoacceptor) domain AOD60_15855 SM00530 Helix-turn-helix XRE-family like proteins AOD60_15905 SM00382 ATPases associated with a variety of cellular activities AOD60_15915 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOD60_15930 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD60_15930 SM00387 Histidine kinase-like ATPases AOD60_15930 SM00388 His Kinase A (phosphoacceptor) domain AOD60_15935 SM00448 cheY-homologous receiver domain AOD60_15935 SM00862 Transcriptional regulatory protein, C terminal AOD60_15945 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD60_16040 SM00354 helix_turn _helix lactose operon repressor AOD60_16045 SM00028 Tetratricopeptide repeats AOD60_16080 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOD60_16080 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD60_16080 SM00319 Homologues of the ligand binding domain of Tar AOD60_16100 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AOD60_16125 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOD60_16170 SM00344 helix_turn_helix ASNC type AOD60_16235 SM00342 helix_turn_helix, arabinose operon control protein AOD60_16250 SM00287 Bacterial SH3 domain homologues AOD60_16300 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD60_16325 SM00382 ATPases associated with a variety of cellular activities AOD60_16335 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOD60_16405 SM00382 ATPases associated with a variety of cellular activities AOD60_16450 SM00530 Helix-turn-helix XRE-family like proteins AOD60_16455 SM01207 AOD60_16455 AOD60_16515 SM00382 ATPases associated with a variety of cellular activities AOD60_16530 SM00530 Helix-turn-helix XRE-family like proteins AOD60_16590 SM01266 AOD60_16590 AOD60_16605 SM00382 ATPases associated with a variety of cellular activities AOD60_16655 SM00028 Tetratricopeptide repeats AOD60_16680 SM01091 Transporter associated domain AOD60_16685 SM00422 helix_turn_helix, mercury resistance AOD60_16725 SM01350 AOD60_16725 AOD60_16730 SM00861 Transketolase, pyrimidine binding domain AOD60_16745 SM00829 Enoylreductase AOD60_16760 SM00829 Enoylreductase AOD60_16780 SM01276 AOD60_16780 AOD60_16825 SM00914 AOD60_16825 AOD60_16860 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD60_16860 SM00866 AOD60_16860 AOD60_16895 SM00849 Metallo-beta-lactamase superfamily AOD60_16960 SM00248 ankyrin repeats AOD60_16965 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOD60_17005 SM00871 Bacterial transcription activator, effector binding domain AOD60_17025 SM00382 ATPases associated with a variety of cellular activities AOD60_17050 SM00849 Metallo-beta-lactamase superfamily AOD60_17055 SM00641 Glycosyl hydrolases family 25 AOD60_17120 SM00849 Metallo-beta-lactamase superfamily AOD60_17255 SM00829 Enoylreductase AOD60_17260 SM00855 Phosphoglycerate mutase family AOD60_17270 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AOD60_17270 SM00534 ATPase domain of DNA mismatch repair MUTS family AOD60_17280 SM00642 Alpha-amylase domain AOD60_17350 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOD60_17355 SM00829 Enoylreductase AOD60_17440 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AOD60_17485 SM00479 AOD60_17485 AOD60_17490 SM00357 Cold shock protein domain AOD60_17515 SM01022 AOD60_17515 AOD60_17625 SM00852 Probable molybdopterin binding domain AOD60_17640 SM00729 Elongator protein 3, MiaB family, Radical SAM AOD60_17660 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AOD60_17660 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AOD60_17770 SM00382 ATPases associated with a variety of cellular activities AOD60_17785 SM00434 DNA Topoisomerase IV AOD60_17790 SM00387 Histidine kinase-like ATPases AOD60_17790 SM00433 TopoisomeraseII AOD60_17800 SM00881 CoA binding domain AOD60_17805 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AOD60_17810 SM00448 cheY-homologous receiver domain AOD60_17810 SM00862 Transcriptional regulatory protein, C terminal AOD60_17825 SM01207 AOD60_17825 AOD60_17840 SM00257 Lysin motif AOD60_17840 SM00636 AOD60_17840 AOD60_17860 SM00479 AOD60_17860 AOD60_17875 SM00382 ATPases associated with a variety of cellular activities AOD60_17920 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AOD60_17985 SM00644 AOD60_17985 AOD60_17985 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. AOD60_17990 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AOD60_18005 SM00091 PAS domain AOD60_18005 SM00387 Histidine kinase-like ATPases AOD60_18005 SM00388 His Kinase A (phosphoacceptor) domain AOD60_18035 SM01058 CarD-like/TRCF domain AOD60_18170 SM00644 AOD60_18170 AOD60_18185 SM00382 ATPases associated with a variety of cellular activities AOD60_18190 SM00382 ATPases associated with a variety of cellular activities AOD60_18205 SM00861 Transketolase, pyrimidine binding domain AOD60_18230 SM00382 ATPases associated with a variety of cellular activities AOD60_18235 SM00062 Bacterial periplasmic substrate-binding proteins AOD60_18255 SM00857 Resolvase, N terminal domain AOD60_18280 SM00028 Tetratricopeptide repeats AOD60_18310 SM00287 Bacterial SH3 domain homologues AOD60_18310 SM00644 AOD60_18310 AOD60_18470 SM00530 Helix-turn-helix XRE-family like proteins AOD60_18550 SM00382 ATPases associated with a variety of cellular activities AOD60_18600 SM00530 Helix-turn-helix XRE-family like proteins AOD60_18605 SM00530 Helix-turn-helix XRE-family like proteins AOD60_18630 SM01230 AOD60_18630 AOD60_18635 SM00422 helix_turn_helix, mercury resistance AOD60_18655 SM00382 ATPases associated with a variety of cellular activities AOD60_18685 SM00287 Bacterial SH3 domain homologues AOD60_18700 SM00420 helix_turn_helix, Deoxyribose operon repressor AOD60_18700 SM01134 AOD60_18700 AOD60_18730 SM00636 AOD60_18730 AOD60_18745 SM00411 bacterial (prokaryotic) histone like domain AOD60_18775 SM00382 ATPases associated with a variety of cellular activities AOD60_18805 SM00342 helix_turn_helix, arabinose operon control protein AOD60_18815 SM00478 endonuclease III AOD60_18850 SM00052 Putative diguanylate phosphodiesterase AOD60_18850 SM00091 PAS domain AOD60_18850 SM00267 diguanylate cyclase AOD60_18880 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD60_18900 SM00148 Phospholipase C, catalytic domain (part); domain X AOD60_18910 SM00257 Lysin motif AOD60_18940 SM00387 Histidine kinase-like ATPases AOD60_18940 SM00388 His Kinase A (phosphoacceptor) domain AOD60_18945 SM00448 cheY-homologous receiver domain AOD60_18945 SM00862 Transcriptional regulatory protein, C terminal AOD60_18960 SM00382 ATPases associated with a variety of cellular activities AOD60_18965 SM00853 MutL C terminal dimerisation domain AOD60_18965 SM01340 AOD60_18965 AOD60_18970 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AOD60_18970 SM00534 ATPase domain of DNA mismatch repair MUTS family AOD60_18985 SM00729 Elongator protein 3, MiaB family, Radical SAM AOD60_19015 SM00322 K homology RNA-binding domain AOD60_19015 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOD60_19030 SM00852 Probable molybdopterin binding domain AOD60_19085 SM00382 ATPases associated with a variety of cellular activities AOD60_19095 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD60_19095 SM00866 AOD60_19095 AOD60_19100 SM00382 ATPases associated with a variety of cellular activities AOD60_19100 SM00843 AOD60_19100 AOD60_19115 SM00849 Metallo-beta-lactamase superfamily AOD60_19125 SM01130 AOD60_19125 AOD60_19135 SM00859 Semialdehyde dehydrogenase, NAD binding domain AOD60_19165 SM00316 Ribosomal protein S1-like RNA-binding domain AOD60_19165 SM00322 K homology RNA-binding domain AOD60_19170 SM01387 AOD60_19170 AOD60_19175 SM00904 Riboflavin kinase AOD60_19210 SM00316 Ribosomal protein S1-like RNA-binding domain AOD60_19210 SM00322 K homology RNA-binding domain AOD60_19220 SM00479 AOD60_19220 AOD60_19220 SM00481 DNA polymerase alpha chain like domain AOD60_19230 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AOD60_19275 SM00382 ATPases associated with a variety of cellular activities AOD60_19275 SM01086 C-terminal, D2-small domain, of ClpB protein AOD60_19295 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AOD60_19295 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AOD60_19295 SM00493 AOD60_19295 AOD60_19305 SM00881 CoA binding domain AOD60_19355 SM00382 ATPases associated with a variety of cellular activities AOD60_19355 SM00962 SRP54-type protein, GTPase domain AOD60_19355 SM00963 SRP54-type protein, helical bundle domain AOD60_19365 SM00382 ATPases associated with a variety of cellular activities AOD60_19365 SM00962 SRP54-type protein, GTPase domain AOD60_19365 SM00963 SRP54-type protein, helical bundle domain AOD60_19370 SM00968 SMC proteins Flexible Hinge Domain AOD60_19375 SM00358 Double-stranded RNA binding motif AOD60_19375 SM00535 Ribonuclease III family AOD60_19385 SM00822 AOD60_19385 AOD60_19390 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AOD60_19405 SM00487 DEAD-like helicases superfamily AOD60_19405 SM00490 helicase superfamily c-terminal domain AOD60_19410 SM01120 AOD60_19410 AOD60_19410 SM01121 AOD60_19410 AOD60_19430 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain AOD60_19445 SM00220 Serine/Threonine protein kinases, catalytic domain AOD60_19445 SM00740 AOD60_19445 AOD60_19450 SM00331 Sigma factor PP2C-like phosphatases AOD60_19450 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AOD60_19475 SM00487 DEAD-like helicases superfamily AOD60_19475 SM00490 helicase superfamily c-terminal domain AOD60_19485 SM01409 AOD60_19485 AOD60_19490 SM00072 Guanylate kinase homologues. AOD60_19505 SM00831 Cation transporter/ATPase, N-terminus AOD60_19550 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AOD60_19565 SM00851 MGS-like domain AOD60_19565 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AOD60_19565 SM01209 AOD60_19565 AOD60_19570 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AOD60_19595 SM00363 S4 RNA-binding domain AOD60_19620 SM00363 S4 RNA-binding domain AOD60_19665 SM00864 Tubulin/FtsZ family, GTPase domain AOD60_19665 SM00865 Tubulin/FtsZ family, C-terminal domain AOD60_19670 SM00842 Cell division protein FtsA AOD60_19710 SM00740 AOD60_19710 AOD60_19715 SM00740 AOD60_19715 AOD60_19745 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains AOD60_19785 SM00530 Helix-turn-helix XRE-family like proteins AOD60_19800 SM00644 AOD60_19800 AOD60_19910 SM00507 HNH nucleases AOD60_19955 SM00530 Helix-turn-helix XRE-family like proteins AOD60_20025 SM00382 ATPases associated with a variety of cellular activities AOD60_20050 SM00530 Helix-turn-helix XRE-family like proteins AOD60_20055 SM00530 Helix-turn-helix XRE-family like proteins AOD60_20065 SM00530 Helix-turn-helix XRE-family like proteins AOD60_20090 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AOD60_20130 SM00855 Phosphoglycerate mutase family AOD60_20195 SM00878 Biotin carboxylase C-terminal domain AOD60_20215 SM00670 Large family of predicted nucleotide-binding domains AOD60_20240 SM00838 Elongation factor G C-terminus AOD60_20320 SM00861 Transketolase, pyrimidine binding domain AOD60_20350 SM00849 Metallo-beta-lactamase superfamily AOD60_20415 SM00052 Putative diguanylate phosphodiesterase AOD60_20510 SM00387 Histidine kinase-like ATPases AOD60_20510 SM00388 His Kinase A (phosphoacceptor) domain AOD60_20525 SM00354 helix_turn _helix lactose operon repressor AOD60_20545 SM00642 Alpha-amylase domain AOD60_20550 SM00642 Alpha-amylase domain AOD60_20555 SM00382 ATPases associated with a variety of cellular activities AOD60_20590 SM00382 ATPases associated with a variety of cellular activities AOD60_20680 SM01007 Class II Aldolase and Adducin N-terminal domain AOD60_20705 SM00267 diguanylate cyclase AOD60_20740 SM01061 CAT RNA binding domain AOD60_20750 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD60_20750 SM00866 AOD60_20750 AOD60_20765 SM00849 Metallo-beta-lactamase superfamily AOD60_20870 SM00387 Histidine kinase-like ATPases AOD60_20880 SM00936 Penicillin-binding protein 5, C-terminal domain AOD60_20885 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD60_20890 SM00382 ATPases associated with a variety of cellular activities AOD60_20910 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD60_20930 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AOD60_21025 SM00354 helix_turn _helix lactose operon repressor AOD60_21045 SM00704 CDGSH-type zinc finger. Function unknown. AOD60_21075 SM00729 Elongator protein 3, MiaB family, Radical SAM AOD60_21075 SM00876 Biotin and Thiamin Synthesis associated domain AOD60_21125 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD60_21160 SM00859 Semialdehyde dehydrogenase, NAD binding domain AOD60_21205 SM00849 Metallo-beta-lactamase superfamily AOD60_21255 SM00382 ATPases associated with a variety of cellular activities AOD60_21265 SM00062 Bacterial periplasmic substrate-binding proteins AOD60_21265 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AOD60_21300 SM00861 Transketolase, pyrimidine binding domain AOD60_21320 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AOD60_21335 SM00091 PAS domain AOD60_21335 SM00382 ATPases associated with a variety of cellular activities AOD60_21360 SM00448 cheY-homologous receiver domain AOD60_21370 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AOD60_21385 SM00363 S4 RNA-binding domain AOD60_21390 SM00861 Transketolase, pyrimidine binding domain AOD60_21425 SM00878 Biotin carboxylase C-terminal domain AOD60_21475 SM00382 ATPases associated with a variety of cellular activities AOD60_21495 SM00841 Elongation factor P, C-terminal AOD60_21495 SM01185 AOD60_21495 AOD60_21530 SM00529 Helix-turn-helix diphteria tox regulatory element AOD60_21550 SM00450 Rhodanese Homology Domain AOD60_21555 SM00354 helix_turn _helix lactose operon repressor AOD60_21610 SM00382 ATPases associated with a variety of cellular activities AOD60_21615 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD60_21645 SM00487 DEAD-like helicases superfamily AOD60_21645 SM00490 helicase superfamily c-terminal domain AOD60_21680 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AOD60_21715 SM00382 ATPases associated with a variety of cellular activities AOD60_21770 SM01018 B12 binding domain AOD60_21805 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOD60_21815 SM00849 Metallo-beta-lactamase superfamily AOD60_21855 SM00382 ATPases associated with a variety of cellular activities AOD60_21920 SM00382 ATPases associated with a variety of cellular activities AOD60_21935 SM00518 AP endonuclease family 2 AOD60_21940 SM00487 DEAD-like helicases superfamily AOD60_21940 SM00490 helicase superfamily c-terminal domain AOD60_21975 SM00400 zinc finger AOD60_21975 SM00493 AOD60_21975 AOD60_21975 SM00766 DNA primase DnaG DnaB-binding AOD60_21995 SM00116 Domain in cystathionine beta-synthase and other proteins. AOD60_22030 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOD60_22065 SM00729 Elongator protein 3, MiaB family, Radical SAM AOD60_22080 SM00271 DnaJ molecular chaperone homology domain AOD60_22100 SM00729 Elongator protein 3, MiaB family, Radical SAM AOD60_22110 SM00838 Elongation factor G C-terminus AOD60_22140 SM00849 Metallo-beta-lactamase superfamily AOD60_22150 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AOD60_22170 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOD60_22180 SM01103 AOD60_22180 AOD60_22235 SM00954 Region found in RelA / SpoT proteins AOD60_22245 SM00098 Alkaline phosphatase homologues AOD60_22270 SM00855 Phosphoglycerate mutase family AOD60_22320 SM00530 Helix-turn-helix XRE-family like proteins AOD60_22345 SM00382 ATPases associated with a variety of cellular activities AOD60_22440 SM00732 Likely ribonuclease with RNase H fold. AOD60_22450 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AOD60_22485 SM00028 Tetratricopeptide repeats AOD60_22505 SM00382 ATPases associated with a variety of cellular activities AOD60_22540 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOD60_22540 SM00954 Region found in RelA / SpoT proteins AOD60_22585 SM01323 AOD60_22585 AOD60_22605 SM00382 ATPases associated with a variety of cellular activities AOD60_22610 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AOD60_22635 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOD60_22650 SM00257 Lysin motif AOD60_22700 SM00382 ATPases associated with a variety of cellular activities AOD60_22705 SM00387 Histidine kinase-like ATPases AOD60_22715 SM00448 cheY-homologous receiver domain AOD60_22715 SM00862 Transcriptional regulatory protein, C terminal AOD60_22725 SM01317 AOD60_22725 AOD60_22815 SM00257 Lysin motif AOD60_22825 SM01004 Delta-aminolevulinic acid dehydratase AOD60_22850 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD60_22865 SM00382 ATPases associated with a variety of cellular activities AOD60_22865 SM00464 Found in ATP-dependent protease La (LON) AOD60_22870 SM00382 ATPases associated with a variety of cellular activities AOD60_22875 SM00382 ATPases associated with a variety of cellular activities AOD60_22875 SM00994 ClpX C4-type zinc finger AOD60_22875 SM01086 C-terminal, D2-small domain, of ClpB protein AOD60_22935 SM00909 Sporulation and spore germination AOD60_22970 SM00421 helix_turn_helix, Lux Regulon AOD60_23010 SM00382 ATPases associated with a variety of cellular activities AOD60_23015 SM00382 ATPases associated with a variety of cellular activities AOD60_23025 SM00342 helix_turn_helix, arabinose operon control protein AOD60_23025 SM00448 cheY-homologous receiver domain AOD60_23045 SM00530 Helix-turn-helix XRE-family like proteins AOD60_23070 SM00382 ATPases associated with a variety of cellular activities AOD60_23120 SM00465 GIY-YIG type nucleases (URI domain) AOD60_23130 SM00893 Electron transfer flavoprotein domain AOD60_23135 SM00893 Electron transfer flavoprotein domain AOD60_23200 SM00382 ATPases associated with a variety of cellular activities AOD60_23205 SM00387 Histidine kinase-like ATPases AOD60_23205 SM00388 His Kinase A (phosphoacceptor) domain AOD60_23210 SM00448 cheY-homologous receiver domain AOD60_23210 SM00862 Transcriptional regulatory protein, C terminal AOD60_23225 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AOD60_23245 SM00382 ATPases associated with a variety of cellular activities AOD60_23260 SM00725 NEAr Transporter domain AOD60_23265 SM00725 NEAr Transporter domain AOD60_23270 SM00725 NEAr Transporter domain AOD60_23280 SM00363 S4 RNA-binding domain AOD60_23290 SM00463 Small MutS-related domain AOD60_23290 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AOD60_23290 SM00534 ATPase domain of DNA mismatch repair MUTS family AOD60_23295 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AOD60_23295 SM00481 DNA polymerase alpha chain like domain AOD60_23295 SM00483 DNA polymerase X family AOD60_23335 SM00873 B3/4 domain AOD60_23335 SM00874 tRNA synthetase B5 domain AOD60_23335 SM00896 Ferredoxin-fold anticodon binding domain AOD60_23345 SM00967 RNA 2'-O ribose methyltransferase substrate binding AOD60_23420 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AOD60_23430 SM00382 ATPases associated with a variety of cellular activities AOD60_23450 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AOD60_23465 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AOD60_23465 SM01232 AOD60_23465 AOD60_23470 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AOD60_23470 SM00474 3'-5' exonuclease AOD60_23470 SM00475 5'-3' exonuclease AOD60_23470 SM00482 DNA polymerase A domain AOD60_23475 SM00091 PAS domain AOD60_23475 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD60_23475 SM00387 Histidine kinase-like ATPases AOD60_23475 SM00388 His Kinase A (phosphoacceptor) domain AOD60_23480 SM00448 cheY-homologous receiver domain AOD60_23480 SM00862 Transcriptional regulatory protein, C terminal AOD60_23500 SM01329 AOD60_23500 AOD60_23550 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD60_23555 SM00919 Malic enzyme, NAD binding domain AOD60_23555 SM01274 AOD60_23555 AOD60_23560 SM00481 DNA polymerase alpha chain like domain AOD60_23595 SM00116 Domain in cystathionine beta-synthase and other proteins. AOD60_23605 SM00849 Metallo-beta-lactamase superfamily AOD60_23660 SM00530 Helix-turn-helix XRE-family like proteins AOD60_23670 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AOD60_23670 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AOD60_23790 SM00981 AOD60_23790 AOD60_23830 SM00363 S4 RNA-binding domain AOD60_23830 SM01390 AOD60_23830 AOD60_23845 SM00363 S4 RNA-binding domain AOD60_23875 SM00116 Domain in cystathionine beta-synthase and other proteins. AOD60_23890 SM00448 cheY-homologous receiver domain AOD60_23890 SM00862 Transcriptional regulatory protein, C terminal AOD60_23895 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD60_23895 SM00387 Histidine kinase-like ATPases AOD60_23895 SM00388 His Kinase A (phosphoacceptor) domain AOD60_23900 SM00248 ankyrin repeats AOD60_23935 SM00354 helix_turn _helix lactose operon repressor AOD60_23995 SM00843 AOD60_23995 AOD60_24035 SM00849 Metallo-beta-lactamase superfamily AOD60_24055 SM00642 Alpha-amylase domain AOD60_24080 SM00420 helix_turn_helix, Deoxyribose operon repressor AOD60_24085 SM00363 S4 RNA-binding domain AOD60_24105 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOD60_24130 SM01058 CarD-like/TRCF domain AOD60_24165 SM00852 Probable molybdopterin binding domain AOD60_24200 SM00450 Rhodanese Homology Domain AOD60_24280 SM00382 ATPases associated with a variety of cellular activities AOD60_24300 SM00729 Elongator protein 3, MiaB family, Radical SAM AOD60_24310 SM00382 ATPases associated with a variety of cellular activities AOD60_24350 SM00014 Acid phosphatase homologues AOD60_24365 SM00852 Probable molybdopterin binding domain AOD60_24425 SM00387 Histidine kinase-like ATPases AOD60_24430 SM00387 Histidine kinase-like ATPases AOD60_24430 SM00388 His Kinase A (phosphoacceptor) domain AOD60_24460 SM00382 ATPases associated with a variety of cellular activities AOD60_24515 SM01234 AOD60_24515 AOD60_24520 SM00947 Carbonic anhydrase AOD60_24540 SM00894 Excalibur calcium-binding domain AOD60_24600 SM00899 AOD60_24600 AOD60_24610 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD60_24610 SM00387 Histidine kinase-like ATPases AOD60_24610 SM00388 His Kinase A (phosphoacceptor) domain AOD60_24615 SM00448 cheY-homologous receiver domain AOD60_24615 SM00862 Transcriptional regulatory protein, C terminal AOD60_24645 SM00046 Diacylglycerol kinase catalytic domain (presumed) AOD60_24695 SM00382 ATPases associated with a variety of cellular activities AOD60_24700 SM00342 helix_turn_helix, arabinose operon control protein AOD60_24700 SM00871 Bacterial transcription activator, effector binding domain AOD60_24705 SM00448 cheY-homologous receiver domain AOD60_24705 SM00862 Transcriptional regulatory protein, C terminal AOD60_24710 SM00387 Histidine kinase-like ATPases AOD60_24735 SM00382 ATPases associated with a variety of cellular activities AOD60_24755 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD60_24755 SM00866 AOD60_24755 AOD60_24795 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD60_24795 SM00387 Histidine kinase-like ATPases AOD60_24795 SM00388 His Kinase A (phosphoacceptor) domain AOD60_24800 SM00448 cheY-homologous receiver domain AOD60_24800 SM00862 Transcriptional regulatory protein, C terminal AOD60_24805 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AOD60_24845 SM00357 Cold shock protein domain AOD60_24885 SM00642 Alpha-amylase domain AOD60_25050 SM00316 Ribosomal protein S1-like RNA-binding domain AOD60_25060 SM00344 helix_turn_helix ASNC type AOD60_25095 SM01298 AOD60_25095 AOD60_25100 SM00479 AOD60_25100 AOD60_25195 SM00871 Bacterial transcription activator, effector binding domain AOD60_25255 SM00382 ATPases associated with a variety of cellular activities AOD60_25280 SM00860 SMI1 / KNR4 family AOD60_25350 SM00420 helix_turn_helix, Deoxyribose operon repressor AOD60_25390 SM00422 helix_turn_helix, mercury resistance AOD60_25405 SM00855 Phosphoglycerate mutase family AOD60_25415 SM00729 Elongator protein 3, MiaB family, Radical SAM AOD60_25480 SM00382 ATPases associated with a variety of cellular activities AOD60_25500 SM00382 ATPases associated with a variety of cellular activities AOD60_25500 SM00930 AOD60_25500 AOD60_25520 SM00493 AOD60_25520 AOD60_25605 SM00849 Metallo-beta-lactamase superfamily AOD60_25655 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOD60_25655 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD60_25725 SM00530 Helix-turn-helix XRE-family like proteins AOD60_25750 SM00448 cheY-homologous receiver domain AOD60_25750 SM00862 Transcriptional regulatory protein, C terminal AOD60_25755 SM00387 Histidine kinase-like ATPases AOD60_25755 SM00388 His Kinase A (phosphoacceptor) domain AOD60_25775 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOD60_25775 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD60_25795 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD60_25925 SM00363 S4 RNA-binding domain AOD60_25935 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain AOD60_25940 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOD60_25990 SM00382 ATPases associated with a variety of cellular activities AOD60_26010 SM00448 cheY-homologous receiver domain AOD60_26010 SM00862 Transcriptional regulatory protein, C terminal AOD60_26020 SM00316 Ribosomal protein S1-like RNA-binding domain AOD60_26020 SM00357 Cold shock protein domain AOD60_26020 SM00955 AOD60_26020 AOD60_26130 SM00507 HNH nucleases AOD60_26165 SM01192 AOD60_26165 AOD60_26165 SM01193 AOD60_26165 AOD60_26185 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AOD60_26285 SM00028 Tetratricopeptide repeats AOD60_26325 SM00487 DEAD-like helicases superfamily AOD60_26325 SM00490 helicase superfamily c-terminal domain AOD60_26345 SM00422 helix_turn_helix, mercury resistance AOD60_26365 SM00530 Helix-turn-helix XRE-family like proteins AOD60_26380 SM00422 helix_turn_helix, mercury resistance AOD60_26390 SM00382 ATPases associated with a variety of cellular activities AOD60_26400 SM00382 ATPases associated with a variety of cellular activities AOD60_26410 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AOD60_26410 SM00245 tail specific protease AOD60_26420 SM00382 ATPases associated with a variety of cellular activities AOD60_26435 SM00937 AOD60_26435 AOD60_26440 SM00957 SecA DEAD-like domain AOD60_26440 SM00958 SecA preprotein cross-linking domain AOD60_26450 SM00357 Cold shock protein domain AOD60_26460 SM00487 DEAD-like helicases superfamily AOD60_26460 SM00490 helicase superfamily c-terminal domain AOD60_26500 SM00984 UDP binding domain AOD60_26515 SM00382 ATPases associated with a variety of cellular activities AOD60_26520 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. AOD60_26705 SM00287 Bacterial SH3 domain homologues AOD60_26735 SM00487 DEAD-like helicases superfamily AOD60_26735 SM00490 helicase superfamily c-terminal domain AOD60_26780 SM00382 ATPases associated with a variety of cellular activities AOD60_26790 SM00530 Helix-turn-helix XRE-family like proteins AOD60_26815 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD60_26815 SM00387 Histidine kinase-like ATPases AOD60_26815 SM00388 His Kinase A (phosphoacceptor) domain AOD60_26820 SM00448 cheY-homologous receiver domain AOD60_26820 SM00862 Transcriptional regulatory protein, C terminal AOD60_26845 SM00287 Bacterial SH3 domain homologues AOD60_26845 SM00382 ATPases associated with a variety of cellular activities AOD60_26855 SM00984 UDP binding domain AOD60_26925 SM00382 ATPases associated with a variety of cellular activities AOD60_26930 SM00850 LytTr DNA-binding domain AOD60_27015 SM00052 Putative diguanylate phosphodiesterase AOD60_27015 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AOD60_27015 SM00091 PAS domain AOD60_27015 SM00267 diguanylate cyclase AOD60_27035 SM00382 ATPases associated with a variety of cellular activities AOD60_27105 SM00226 Low molecular weight phosphatase family AOD60_27120 SM00903 Flavin reductase like domain AOD60_27155 SM00937 AOD60_27155 AOD60_27170 SM00357 Cold shock protein domain AOD60_27170 SM00382 ATPases associated with a variety of cellular activities AOD60_27170 SM00959 Rho termination factor, N-terminal domain AOD60_27190 SM00448 cheY-homologous receiver domain AOD60_27240 SM00155 Phospholipase D. Active site motifs. AOD60_27250 SM00052 Putative diguanylate phosphodiesterase AOD60_27250 SM00267 diguanylate cyclase AOD60_27260 SM00530 Helix-turn-helix XRE-family like proteins AOD60_27265 SM00421 helix_turn_helix, Lux Regulon AOD60_27265 SM00448 cheY-homologous receiver domain AOD60_27270 SM00387 Histidine kinase-like ATPases AOD60_27280 SM00382 ATPases associated with a variety of cellular activities AOD60_27330 SM00836 DALR anticodon binding domain AOD60_27330 SM01016 Arginyl tRNA synthetase N terminal dom AOD60_27375 SM00422 helix_turn_helix, mercury resistance AOD60_27405 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOD60_27415 SM00382 ATPases associated with a variety of cellular activities AOD60_27465 SM00936 Penicillin-binding protein 5, C-terminal domain AOD60_27510 SM00986 Uracil DNA glycosylase superfamily AOD60_27510 SM00987 UreE urease accessory protein, C-terminal domain AOD60_27520 SM00382 ATPases associated with a variety of cellular activities AOD60_27530 SM00354 helix_turn _helix lactose operon repressor AOD60_27565 SM00100 Cyclic nucleotide-monophosphate binding domain AOD60_27575 SM00421 helix_turn_helix, Lux Regulon AOD60_27575 SM00448 cheY-homologous receiver domain AOD60_27590 SM00267 diguanylate cyclase AOD60_27605 SM00448 cheY-homologous receiver domain AOD60_27605 SM00850 LytTr DNA-binding domain AOD60_27635 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOD60_27660 SM00382 ATPases associated with a variety of cellular activities AOD60_27725 SM00448 cheY-homologous receiver domain AOD60_27725 SM00850 LytTr DNA-binding domain AOD60_27730 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AOD60_27730 SM00387 Histidine kinase-like ATPases AOD60_27785 SM00487 DEAD-like helicases superfamily AOD60_27785 SM00490 helicase superfamily c-terminal domain AOD60_27795 SM01240 AOD60_27795 AOD60_27820 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AOD60_27825 SM00849 Metallo-beta-lactamase superfamily AOD60_27840 SM00091 PAS domain AOD60_27840 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD60_27840 SM00387 Histidine kinase-like ATPases AOD60_27840 SM00388 His Kinase A (phosphoacceptor) domain AOD60_27845 SM00448 cheY-homologous receiver domain AOD60_27845 SM00862 Transcriptional regulatory protein, C terminal AOD60_27870 SM00788 Adenylosuccinate synthetase AOD60_27885 SM00267 diguanylate cyclase AOD60_27930 SM00470 ParB-like nuclease domain AOD60_27940 SM00470 ParB-like nuclease domain AOD60_27950 SM01228 AOD60_27950 AOD60_27960 SM00393 Putative single-stranded nucleic acids-binding domain AOD60_27960 SM01245 AOD60_27960