AOD65_00005 SM00382 ATPases associated with a variety of cellular activities AOD65_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain AOD65_00010 SM00480 DNA polymerase III beta subunit AOD65_00025 SM00387 Histidine kinase-like ATPases AOD65_00025 SM00433 TopoisomeraseII AOD65_00030 SM00434 DNA Topoisomerase IV AOD65_00065 SM00116 Domain in cystathionine beta-synthase and other proteins. AOD65_00065 SM01240 AOD65_00065 AOD65_00070 SM00936 Penicillin-binding protein 5, C-terminal domain AOD65_00125 SM00382 ATPases associated with a variety of cellular activities AOD65_00135 SM00493 AOD65_00135 AOD65_00220 SM00966 SpoVT / AbrB like domain AOD65_00235 SM00493 AOD65_00235 AOD65_00240 SM00650 Ribosomal RNA adenine dimethylases AOD65_00285 SM01400 AOD65_00285 AOD65_00300 SM00487 DEAD-like helicases superfamily AOD65_00300 SM00490 helicase superfamily c-terminal domain AOD65_00300 SM00982 AOD65_00300 AOD65_00300 SM01058 CarD-like/TRCF domain AOD65_00305 SM00966 SpoVT / AbrB like domain AOD65_00320 SM00363 S4 RNA-binding domain AOD65_00340 SM00316 Ribosomal protein S1-like RNA-binding domain AOD65_00355 SM00331 Sigma factor PP2C-like phosphatases AOD65_00355 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AOD65_00360 SM00977 TilS substrate C-terminal domain AOD65_00370 SM00382 ATPases associated with a variety of cellular activities AOD65_00410 SM00905 Dihydroneopterin aldolase AOD65_00420 SM00530 Helix-turn-helix XRE-family like proteins AOD65_00465 SM00382 ATPases associated with a variety of cellular activities AOD65_00465 SM01086 C-terminal, D2-small domain, of ClpB protein AOD65_00470 SM00382 ATPases associated with a variety of cellular activities AOD65_00480 SM00670 Large family of predicted nucleotide-binding domains AOD65_00505 SM00840 AOD65_00505 AOD65_00510 SM00535 Ribonuclease III family AOD65_00515 SM00967 RNA 2'-O ribose methyltransferase substrate binding AOD65_00525 SM00421 helix_turn_helix, Lux Regulon AOD65_00540 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AOD65_00545 SM00649 Ribosomal protein L11/L12 AOD65_00575 SM00663 RNA polymerase I subunit A N-terminus AOD65_00595 SM00838 Elongation factor G C-terminus AOD65_00595 SM00889 Elongation factor G, domain IV AOD65_00605 SM01403 AOD65_00605 AOD65_00625 SM01382 AOD65_00625 AOD65_00625 SM01383 AOD65_00625 AOD65_00640 SM00322 K homology RNA-binding domain AOD65_00660 SM01374 AOD65_00660 AOD65_00665 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AOD65_00725 SM00316 Ribosomal protein S1-like RNA-binding domain AOD65_00745 SM00662 RNA polymerases D AOD65_00755 SM00382 ATPases associated with a variety of cellular activities AOD65_00760 SM00382 ATPases associated with a variety of cellular activities AOD65_00790 SM00646 AOD65_00790 AOD65_00805 SM01251 AOD65_00805 AOD65_00925 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD65_00925 SM00895 AOD65_00925 AOD65_00940 SM01350 AOD65_00940 AOD65_00990 SM00382 ATPases associated with a variety of cellular activities AOD65_00990 SM00930 AOD65_00990 AOD65_01000 SM00829 Enoylreductase AOD65_01050 SM00382 ATPases associated with a variety of cellular activities AOD65_01055 SM00382 ATPases associated with a variety of cellular activities AOD65_01070 SM00342 helix_turn_helix, arabinose operon control protein AOD65_01165 SM00563 Phosphate acyltransferases AOD65_01175 SM00354 helix_turn _helix lactose operon repressor AOD65_01230 SM00382 ATPases associated with a variety of cellular activities AOD65_01260 SM00382 ATPases associated with a variety of cellular activities AOD65_01265 SM00382 ATPases associated with a variety of cellular activities AOD65_01325 SM00487 DEAD-like helicases superfamily AOD65_01325 SM00490 helicase superfamily c-terminal domain AOD65_01350 SM01005 Alanine racemase, C-terminal domain AOD65_01365 SM00316 Ribosomal protein S1-like RNA-binding domain AOD65_01365 SM00732 Likely ribonuclease with RNase H fold. AOD65_01375 SM00731 SprT homologues. AOD65_01480 SM00382 ATPases associated with a variety of cellular activities AOD65_01485 SM00881 CoA binding domain AOD65_01500 SM00883 Chaperonin 10 Kd subunit AOD65_01520 SM00448 cheY-homologous receiver domain AOD65_01520 SM00862 Transcriptional regulatory protein, C terminal AOD65_01525 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD65_01525 SM00387 Histidine kinase-like ATPases AOD65_01525 SM00388 His Kinase A (phosphoacceptor) domain AOD65_01605 SM00382 ATPases associated with a variety of cellular activities AOD65_01610 SM00387 Histidine kinase-like ATPases AOD65_01610 SM00388 His Kinase A (phosphoacceptor) domain AOD65_01615 SM00448 cheY-homologous receiver domain AOD65_01615 SM00862 Transcriptional regulatory protein, C terminal AOD65_01635 SM01001 AIR carboxylase AOD65_01645 SM00998 Adenylosuccinate lyase C-terminus AOD65_01660 SM01211 AOD65_01660 AOD65_01685 SM00798 AICARFT/IMPCHase bienzyme AOD65_01685 SM00851 MGS-like domain AOD65_01690 SM01209 AOD65_01690 AOD65_01690 SM01210 AOD65_01690 AOD65_01700 SM00244 prohibitin homologues AOD65_01720 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AOD65_01720 SM00292 breast cancer carboxy-terminal domain AOD65_01720 SM00532 Ligase N family AOD65_01750 SM00382 ATPases associated with a variety of cellular activities AOD65_01750 SM00930 AOD65_01750 AOD65_01780 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD65_01800 SM00845 GatB domain AOD65_01805 SM00046 Diacylglycerol kinase catalytic domain (presumed) AOD65_01820 SM00382 ATPases associated with a variety of cellular activities AOD65_01885 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AOD65_01930 SM01007 Class II Aldolase and Adducin N-terminal domain AOD65_02045 SM00062 Bacterial periplasmic substrate-binding proteins AOD65_02045 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AOD65_02050 SM00382 ATPases associated with a variety of cellular activities AOD65_02060 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOD65_02060 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD65_02065 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOD65_02065 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD65_02070 SM00642 Alpha-amylase domain AOD65_02090 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AOD65_02090 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AOD65_02090 SM00493 AOD65_02090 AOD65_02110 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOD65_02110 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD65_02130 SM00382 ATPases associated with a variety of cellular activities AOD65_02135 SM00382 ATPases associated with a variety of cellular activities AOD65_02140 SM00060 Fibronectin type 3 domain AOD65_02140 SM00636 AOD65_02140 AOD65_02140 SM00637 AOD65_02140 AOD65_02170 SM00530 Helix-turn-helix XRE-family like proteins AOD65_02195 SM00946 Prolyl-tRNA synthetase, C-terminal AOD65_02240 SM00831 Cation transporter/ATPase, N-terminus AOD65_02250 SM00226 Low molecular weight phosphatase family AOD65_02345 SM00478 endonuclease III AOD65_02360 SM00530 Helix-turn-helix XRE-family like proteins AOD65_02375 SM00530 Helix-turn-helix XRE-family like proteins AOD65_02380 SM00530 Helix-turn-helix XRE-family like proteins AOD65_02410 SM00382 ATPases associated with a variety of cellular activities AOD65_02645 SM00382 ATPases associated with a variety of cellular activities AOD65_02665 SM00530 Helix-turn-helix XRE-family like proteins AOD65_02725 SM00984 UDP binding domain AOD65_02810 SM00478 endonuclease III AOD65_02810 SM00525 AOD65_02810 AOD65_02835 SM00382 ATPases associated with a variety of cellular activities AOD65_02855 SM00382 ATPases associated with a variety of cellular activities AOD65_03010 SM00567 E-Z type HEAT repeats AOD65_03025 SM00052 Putative diguanylate phosphodiesterase AOD65_03025 SM00091 PAS domain AOD65_03025 SM00267 diguanylate cyclase AOD65_03035 SM00763 PrkA AAA domain AOD65_03050 SM00364 Leucine-rich repeats, bacterial type AOD65_03050 SM00365 Leucine-rich repeat, SDS22-like subfamily AOD65_03050 SM00369 Leucine-rich repeats, typical (most populated) subfamily AOD65_03050 SM00725 NEAr Transporter domain AOD65_03065 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AOD65_03075 SM00244 prohibitin homologues AOD65_03080 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOD65_03080 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD65_03085 SM00091 PAS domain AOD65_03085 SM00387 Histidine kinase-like ATPases AOD65_03110 SM00248 ankyrin repeats AOD65_03120 SM00382 ATPases associated with a variety of cellular activities AOD65_03145 SM00448 cheY-homologous receiver domain AOD65_03145 SM00862 Transcriptional regulatory protein, C terminal AOD65_03150 SM00387 Histidine kinase-like ATPases AOD65_03150 SM00388 His Kinase A (phosphoacceptor) domain AOD65_03165 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOD65_03165 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD65_03170 SM00387 Histidine kinase-like ATPases AOD65_03175 SM00448 cheY-homologous receiver domain AOD65_03185 SM00919 Malic enzyme, NAD binding domain AOD65_03185 SM01274 AOD65_03185 AOD65_03200 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD65_03210 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD65_03210 SM00387 Histidine kinase-like ATPases AOD65_03210 SM00388 His Kinase A (phosphoacceptor) domain AOD65_03215 SM00448 cheY-homologous receiver domain AOD65_03215 SM00862 Transcriptional regulatory protein, C terminal AOD65_03235 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AOD65_03235 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AOD65_03250 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AOD65_03250 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AOD65_03260 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOD65_03335 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOD65_03365 SM00382 ATPases associated with a variety of cellular activities AOD65_03390 SM00327 von Willebrand factor (vWF) type A domain AOD65_03395 SM00382 ATPases associated with a variety of cellular activities AOD65_03400 SM00155 Phospholipase D. Active site motifs. AOD65_03415 SM00052 Putative diguanylate phosphodiesterase AOD65_03415 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AOD65_03415 SM00091 PAS domain AOD65_03415 SM00267 diguanylate cyclase AOD65_03425 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD65_03425 SM00866 AOD65_03425 AOD65_03435 SM00642 Alpha-amylase domain AOD65_03470 SM00382 ATPases associated with a variety of cellular activities AOD65_03475 SM00062 Bacterial periplasmic substrate-binding proteins AOD65_03475 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AOD65_03525 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD65_03525 SM00387 Histidine kinase-like ATPases AOD65_03525 SM00388 His Kinase A (phosphoacceptor) domain AOD65_03530 SM00448 cheY-homologous receiver domain AOD65_03530 SM00862 Transcriptional regulatory protein, C terminal AOD65_03570 SM00382 ATPases associated with a variety of cellular activities AOD65_03585 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD65_03600 SM00354 helix_turn _helix lactose operon repressor AOD65_03615 SM00382 ATPases associated with a variety of cellular activities AOD65_03650 SM00829 Enoylreductase AOD65_03660 SM00770 Zinc dependent phospholipase C (alpha toxin) AOD65_03695 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOD65_03705 SM00530 Helix-turn-helix XRE-family like proteins AOD65_03750 SM00530 Helix-turn-helix XRE-family like proteins AOD65_03850 SM00899 AOD65_03850 AOD65_03990 SM00116 Domain in cystathionine beta-synthase and other proteins. AOD65_04010 SM00287 Bacterial SH3 domain homologues AOD65_04020 SM00382 ATPases associated with a variety of cellular activities AOD65_04105 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD65_04145 SM00640 Glycosyl hydrolases family 32 AOD65_04155 SM00354 helix_turn _helix lactose operon repressor AOD65_04225 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD65_04240 SM00450 Rhodanese Homology Domain AOD65_04250 SM00450 Rhodanese Homology Domain AOD65_04255 SM00450 Rhodanese Homology Domain AOD65_04255 SM00849 Metallo-beta-lactamase superfamily AOD65_04265 SM00450 Rhodanese Homology Domain AOD65_04270 SM00450 Rhodanese Homology Domain AOD65_04295 SM00829 Enoylreductase AOD65_04345 SM00287 Bacterial SH3 domain homologues AOD65_04355 SM00382 ATPases associated with a variety of cellular activities AOD65_04410 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen AOD65_04510 SM00344 helix_turn_helix ASNC type AOD65_04575 SM01060 AOD65_04575 AOD65_04610 SM00382 ATPases associated with a variety of cellular activities AOD65_04620 SM00062 Bacterial periplasmic substrate-binding proteins AOD65_04620 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AOD65_04630 SM00382 ATPases associated with a variety of cellular activities AOD65_04710 SM00729 Elongator protein 3, MiaB family, Radical SAM AOD65_04745 SM00957 SecA DEAD-like domain AOD65_04745 SM00958 SecA preprotein cross-linking domain AOD65_04760 SM00635 Bacterial Ig-like domain 2 AOD65_04820 SM00646 AOD65_04820 AOD65_04890 SM00382 ATPases associated with a variety of cellular activities AOD65_04905 SM00860 SMI1 / KNR4 family AOD65_04910 SM00860 SMI1 / KNR4 family AOD65_04925 SM00091 PAS domain AOD65_04925 SM00387 Histidine kinase-like ATPases AOD65_04930 SM00448 cheY-homologous receiver domain AOD65_04965 SM00422 helix_turn_helix, mercury resistance AOD65_05090 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD65_05160 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOD65_05180 SM00460 Transglutaminase/protease-like homologues AOD65_05245 SM00331 Sigma factor PP2C-like phosphatases AOD65_05245 SM00448 cheY-homologous receiver domain AOD65_05250 SM00138 Methyltransferase, chemotaxis proteins AOD65_05255 SM00387 Histidine kinase-like ATPases AOD65_05255 SM00388 His Kinase A (phosphoacceptor) domain AOD65_05255 SM00448 cheY-homologous receiver domain AOD65_05295 SM00829 Enoylreductase AOD65_05335 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOD65_05360 SM00028 Tetratricopeptide repeats AOD65_05430 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD65_05480 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD65_05495 SM00382 ATPases associated with a variety of cellular activities AOD65_05560 SM00422 helix_turn_helix, mercury resistance AOD65_05675 SM00849 Metallo-beta-lactamase superfamily AOD65_05700 SM00725 NEAr Transporter domain AOD65_05770 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOD65_05785 SM00342 helix_turn_helix, arabinose operon control protein AOD65_05785 SM00871 Bacterial transcription activator, effector binding domain AOD65_05800 SM00387 Histidine kinase-like ATPases AOD65_05800 SM00388 His Kinase A (phosphoacceptor) domain AOD65_05805 SM00448 cheY-homologous receiver domain AOD65_05805 SM00862 Transcriptional regulatory protein, C terminal AOD65_05835 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOD65_05835 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD65_05875 SM00357 Cold shock protein domain AOD65_05990 SM01060 AOD65_05990 AOD65_06005 SM00642 Alpha-amylase domain AOD65_06010 SM00530 Helix-turn-helix XRE-family like proteins AOD65_06020 SM00316 Ribosomal protein S1-like RNA-binding domain AOD65_06070 SM00382 ATPases associated with a variety of cellular activities AOD65_06070 SM01086 C-terminal, D2-small domain, of ClpB protein AOD65_06100 SM00825 Beta-ketoacyl synthase AOD65_06140 SM00382 ATPases associated with a variety of cellular activities AOD65_06145 SM00382 ATPases associated with a variety of cellular activities AOD65_06185 SM00155 Phospholipase D. Active site motifs. AOD65_06215 SM01118 AOD65_06215 AOD65_06225 SM00954 Region found in RelA / SpoT proteins AOD65_06380 SM00635 Bacterial Ig-like domain 2 AOD65_06495 SM00861 Transketolase, pyrimidine binding domain AOD65_06500 SM00530 Helix-turn-helix XRE-family like proteins AOD65_06595 SM00530 Helix-turn-helix XRE-family like proteins AOD65_06615 SM00382 ATPases associated with a variety of cellular activities AOD65_06635 SM00014 Acid phosphatase homologues AOD65_06685 SM00448 cheY-homologous receiver domain AOD65_06685 SM00862 Transcriptional regulatory protein, C terminal AOD65_06690 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD65_06690 SM00387 Histidine kinase-like ATPases AOD65_06690 SM00388 His Kinase A (phosphoacceptor) domain AOD65_06695 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD65_06695 SM00895 AOD65_06695 AOD65_06765 SM00822 AOD65_06765 AOD65_06830 SM00420 helix_turn_helix, Deoxyribose operon repressor AOD65_06830 SM01134 AOD65_06830 AOD65_06865 SM00387 Histidine kinase-like ATPases AOD65_06865 SM00388 His Kinase A (phosphoacceptor) domain AOD65_06870 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD65_06890 SM00387 Histidine kinase-like ATPases AOD65_06890 SM00388 His Kinase A (phosphoacceptor) domain AOD65_06960 SM00465 GIY-YIG type nucleases (URI domain) AOD65_06960 SM00496 Intron-encoded nuclease repeat 2 AOD65_06975 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD65_06980 SM00382 ATPases associated with a variety of cellular activities AOD65_06990 SM00382 ATPases associated with a variety of cellular activities AOD65_07010 SM00344 helix_turn_helix ASNC type AOD65_07130 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD65_07205 SM00917 LeuA allosteric (dimerisation) domain AOD65_07210 SM01329 AOD65_07210 AOD65_07395 SM00387 Histidine kinase-like ATPases AOD65_07400 SM00421 helix_turn_helix, Lux Regulon AOD65_07400 SM00448 cheY-homologous receiver domain AOD65_07495 SM00091 PAS domain AOD65_07495 SM00388 His Kinase A (phosphoacceptor) domain AOD65_07515 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD65_07515 SM00387 Histidine kinase-like ATPases AOD65_07515 SM00388 His Kinase A (phosphoacceptor) domain AOD65_07570 SM00363 S4 RNA-binding domain AOD65_07590 SM00448 cheY-homologous receiver domain AOD65_07590 SM00862 Transcriptional regulatory protein, C terminal AOD65_07595 SM00091 PAS domain AOD65_07595 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD65_07595 SM00387 Histidine kinase-like ATPases AOD65_07595 SM00388 His Kinase A (phosphoacceptor) domain AOD65_07605 SM00257 Lysin motif AOD65_07630 SM00487 DEAD-like helicases superfamily AOD65_07630 SM00490 helicase superfamily c-terminal domain AOD65_07640 SM00257 Lysin motif AOD65_07650 SM00422 helix_turn_helix, mercury resistance AOD65_07660 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AOD65_07675 SM00644 AOD65_07675 AOD65_07685 SM00870 AOD65_07685 AOD65_07700 SM00316 Ribosomal protein S1-like RNA-binding domain AOD65_07705 SM01240 AOD65_07705 AOD65_07760 SM00411 bacterial (prokaryotic) histone like domain AOD65_07785 SM00562 AOD65_07785 AOD65_07805 SM00028 Tetratricopeptide repeats AOD65_07810 SM00914 AOD65_07810 AOD65_07855 SM00986 Uracil DNA glycosylase superfamily AOD65_07855 SM00987 UreE urease accessory protein, C-terminal domain AOD65_07875 SM00851 MGS-like domain AOD65_07925 SM00479 AOD65_07925 AOD65_07925 SM00487 DEAD-like helicases superfamily AOD65_07925 SM00491 AOD65_07925 AOD65_07950 SM00478 endonuclease III AOD65_07950 SM00525 AOD65_07950 AOD65_07960 SM00060 Fibronectin type 3 domain AOD65_08010 SM00981 AOD65_08010 AOD65_08020 SM00491 AOD65_08020 AOD65_08080 SM00450 Rhodanese Homology Domain AOD65_08110 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AOD65_08110 SM00475 5'-3' exonuclease AOD65_08220 SM00357 Cold shock protein domain AOD65_08270 SM00849 Metallo-beta-lactamase superfamily AOD65_08275 SM00422 helix_turn_helix, mercury resistance AOD65_08275 SM00871 Bacterial transcription activator, effector binding domain AOD65_08365 SM00448 cheY-homologous receiver domain AOD65_08390 SM00138 Methyltransferase, chemotaxis proteins AOD65_08475 SM00382 ATPases associated with a variety of cellular activities AOD65_08540 SM00028 Tetratricopeptide repeats AOD65_08560 SM00028 Tetratricopeptide repeats AOD65_08645 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AOD65_08700 SM00530 Helix-turn-helix XRE-family like proteins AOD65_08720 SM00382 ATPases associated with a variety of cellular activities AOD65_08735 SM00849 Metallo-beta-lactamase superfamily AOD65_08735 SM01027 Beta-Casp domain AOD65_08755 SM00835 Cupin AOD65_08770 SM00855 Phosphoglycerate mutase family AOD65_08830 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD65_08830 SM00895 AOD65_08830 AOD65_08840 SM00833 Cobalamin synthesis protein cobW C-terminal domain AOD65_08930 SM00530 Helix-turn-helix XRE-family like proteins AOD65_08975 SM00421 helix_turn_helix, Lux Regulon AOD65_08975 SM00448 cheY-homologous receiver domain AOD65_08985 SM00382 ATPases associated with a variety of cellular activities AOD65_09000 SM00155 Phospholipase D. Active site motifs. AOD65_09020 SM00919 Malic enzyme, NAD binding domain AOD65_09020 SM01274 AOD65_09020 AOD65_09025 SM00387 Histidine kinase-like ATPases AOD65_09030 SM00448 cheY-homologous receiver domain AOD65_09035 SM00487 DEAD-like helicases superfamily AOD65_09035 SM00490 helicase superfamily c-terminal domain AOD65_09100 SM00646 AOD65_09100 AOD65_09105 SM00047 Lysozyme subfamily 2 AOD65_09280 SM00854 Bacterial capsule synthesis protein PGA_cap AOD65_09310 SM00850 LytTr DNA-binding domain AOD65_09365 SM00729 Elongator protein 3, MiaB family, Radical SAM AOD65_09375 SM00448 cheY-homologous receiver domain AOD65_09375 SM00862 Transcriptional regulatory protein, C terminal AOD65_09395 SM00450 Rhodanese Homology Domain AOD65_09445 SM01133 AOD65_09445 AOD65_09455 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AOD65_09490 SM01011 Aminopeptidase P, N-terminal domain AOD65_09500 SM00287 Bacterial SH3 domain homologues AOD65_09510 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AOD65_09510 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AOD65_09510 SM00493 AOD65_09510 AOD65_09605 SM00833 Cobalamin synthesis protein cobW C-terminal domain AOD65_09640 SM00382 ATPases associated with a variety of cellular activities AOD65_09645 SM00382 ATPases associated with a variety of cellular activities AOD65_09680 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD65_09700 SM00382 ATPases associated with a variety of cellular activities AOD65_09705 SM00382 ATPases associated with a variety of cellular activities AOD65_09740 SM00287 Bacterial SH3 domain homologues AOD65_09755 SM00382 ATPases associated with a variety of cellular activities AOD65_09760 SM00448 cheY-homologous receiver domain AOD65_09760 SM00862 Transcriptional regulatory protein, C terminal AOD65_09765 SM00387 Histidine kinase-like ATPases AOD65_09765 SM00388 His Kinase A (phosphoacceptor) domain AOD65_09845 SM00448 cheY-homologous receiver domain AOD65_09845 SM00862 Transcriptional regulatory protein, C terminal AOD65_09850 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD65_09850 SM00387 Histidine kinase-like ATPases AOD65_09850 SM00388 His Kinase A (phosphoacceptor) domain AOD65_09940 SM00460 Transglutaminase/protease-like homologues AOD65_09965 SM00966 SpoVT / AbrB like domain AOD65_09975 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOD65_10010 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOD65_10010 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD65_10075 SM00833 Cobalamin synthesis protein cobW C-terminal domain AOD65_10185 SM00855 Phosphoglycerate mutase family AOD65_10235 SM00155 Phospholipase D. Active site motifs. AOD65_10260 SM01091 Transporter associated domain AOD65_10335 SM00244 prohibitin homologues AOD65_10340 SM00855 Phosphoglycerate mutase family AOD65_10355 SM01005 Alanine racemase, C-terminal domain AOD65_10385 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD65_10500 SM00487 DEAD-like helicases superfamily AOD65_10500 SM00490 helicase superfamily c-terminal domain AOD65_10520 SM00829 Enoylreductase AOD65_10540 SM00849 Metallo-beta-lactamase superfamily AOD65_10555 SM00460 Transglutaminase/protease-like homologues AOD65_10580 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AOD65_10600 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD65_10605 SM00382 ATPases associated with a variety of cellular activities AOD65_10615 SM00100 Cyclic nucleotide-monophosphate binding domain AOD65_10615 SM00419 helix_turn_helix, cAMP Regulatory protein AOD65_10620 SM00729 Elongator protein 3, MiaB family, Radical SAM AOD65_10630 SM00852 Probable molybdopterin binding domain AOD65_10695 SM00894 Excalibur calcium-binding domain AOD65_10750 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOD65_10755 SM00382 ATPases associated with a variety of cellular activities AOD65_10790 SM00567 E-Z type HEAT repeats AOD65_10790 SM00932 Scaffold protein Nfu/NifU N terminal AOD65_10810 SM00836 DALR anticodon binding domain AOD65_10810 SM01016 Arginyl tRNA synthetase N terminal dom AOD65_10860 SM00327 von Willebrand factor (vWF) type A domain AOD65_10875 SM00382 ATPases associated with a variety of cellular activities AOD65_10920 SM00857 Resolvase, N terminal domain AOD65_10980 SM00448 cheY-homologous receiver domain AOD65_10980 SM00862 Transcriptional regulatory protein, C terminal AOD65_10985 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD65_10985 SM00387 Histidine kinase-like ATPases AOD65_10985 SM00388 His Kinase A (phosphoacceptor) domain AOD65_11060 SM00382 ATPases associated with a variety of cellular activities AOD65_11120 SM00563 Phosphate acyltransferases AOD65_11230 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AOD65_11235 SM00421 helix_turn_helix, Lux Regulon AOD65_11235 SM00448 cheY-homologous receiver domain AOD65_11250 SM00829 Enoylreductase AOD65_11315 SM00382 ATPases associated with a variety of cellular activities AOD65_11355 SM01091 Transporter associated domain AOD65_11370 SM00387 Histidine kinase-like ATPases AOD65_11370 SM00388 His Kinase A (phosphoacceptor) domain AOD65_11385 SM00882 Coenzyme A transferase AOD65_11390 SM00882 Coenzyme A transferase AOD65_11405 SM00382 ATPases associated with a variety of cellular activities AOD65_11445 SM00219 Tyrosine kinase, catalytic domain AOD65_11455 SM00014 Acid phosphatase homologues AOD65_11475 SM00860 SMI1 / KNR4 family AOD65_11500 SM00530 Helix-turn-helix XRE-family like proteins AOD65_11560 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. AOD65_11710 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOD65_11750 SM00823 Phosphopantetheine attachment site AOD65_11750 SM00824 Thioesterase AOD65_11755 SM00923 MbtH-like protein AOD65_11775 SM00411 bacterial (prokaryotic) histone like domain AOD65_11820 SM00363 S4 RNA-binding domain AOD65_11825 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AOD65_11880 SM00849 Metallo-beta-lactamase superfamily AOD65_11910 SM00849 Metallo-beta-lactamase superfamily AOD65_11930 SM01059 Chloramphenicol acetyltransferase AOD65_11955 SM00530 Helix-turn-helix XRE-family like proteins AOD65_11995 SM00357 Cold shock protein domain AOD65_12065 SM00859 Semialdehyde dehydrogenase, NAD binding domain AOD65_12100 SM00382 ATPases associated with a variety of cellular activities AOD65_12105 SM00382 ATPases associated with a variety of cellular activities AOD65_12115 SM00646 AOD65_12115 AOD65_12125 SM00530 Helix-turn-helix XRE-family like proteins AOD65_12140 SM00835 Cupin AOD65_12210 SM01207 AOD65_12210 AOD65_12235 SM00849 Metallo-beta-lactamase superfamily AOD65_12250 SM00487 DEAD-like helicases superfamily AOD65_12250 SM00490 helicase superfamily c-terminal domain AOD65_12280 SM00382 ATPases associated with a variety of cellular activities AOD65_12305 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD65_12310 SM00855 Phosphoglycerate mutase family AOD65_12385 SM00014 Acid phosphatase homologues AOD65_12390 SM00354 helix_turn _helix lactose operon repressor AOD65_12470 SM00530 Helix-turn-helix XRE-family like proteins AOD65_12495 SM00646 AOD65_12495 AOD65_12510 SM00382 ATPases associated with a variety of cellular activities AOD65_12520 SM00052 Putative diguanylate phosphodiesterase AOD65_12520 SM00091 PAS domain AOD65_12520 SM00267 diguanylate cyclase AOD65_12530 SM00860 SMI1 / KNR4 family AOD65_12540 SM00450 Rhodanese Homology Domain AOD65_12540 SM00849 Metallo-beta-lactamase superfamily AOD65_12555 SM00382 ATPases associated with a variety of cellular activities AOD65_12585 SM00878 Biotin carboxylase C-terminal domain AOD65_12650 SM00387 Histidine kinase-like ATPases AOD65_12650 SM00388 His Kinase A (phosphoacceptor) domain AOD65_12655 SM00448 cheY-homologous receiver domain AOD65_12655 SM00862 Transcriptional regulatory protein, C terminal AOD65_12710 SM00382 ATPases associated with a variety of cellular activities AOD65_12730 SM00422 helix_turn_helix, mercury resistance AOD65_12730 SM00871 Bacterial transcription activator, effector binding domain AOD65_12760 SM00342 helix_turn_helix, arabinose operon control protein AOD65_12775 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD65_12835 SM00448 cheY-homologous receiver domain AOD65_12835 SM00862 Transcriptional regulatory protein, C terminal AOD65_12865 SM00382 ATPases associated with a variety of cellular activities AOD65_12895 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD65_12900 SM01209 AOD65_12900 AOD65_13025 SM00091 PAS domain AOD65_13025 SM00387 Histidine kinase-like ATPases AOD65_13025 SM00388 His Kinase A (phosphoacceptor) domain AOD65_13050 SM00382 ATPases associated with a variety of cellular activities AOD65_13060 SM00387 Histidine kinase-like ATPases AOD65_13060 SM00388 His Kinase A (phosphoacceptor) domain AOD65_13075 SM00829 Enoylreductase AOD65_13080 SM00740 AOD65_13080 AOD65_13150 SM00422 helix_turn_helix, mercury resistance AOD65_13245 SM00480 DNA polymerase III beta subunit AOD65_13355 SM00465 GIY-YIG type nucleases (URI domain) AOD65_13455 SM00642 Alpha-amylase domain AOD65_13475 SM00871 Bacterial transcription activator, effector binding domain AOD65_13495 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD65_13610 SM00382 ATPases associated with a variety of cellular activities AOD65_13630 SM00420 helix_turn_helix, Deoxyribose operon repressor AOD65_13630 SM01134 AOD65_13630 AOD65_13675 SM00861 Transketolase, pyrimidine binding domain AOD65_13735 SM00116 Domain in cystathionine beta-synthase and other proteins. AOD65_13735 SM00382 ATPases associated with a variety of cellular activities AOD65_13770 SM00060 Fibronectin type 3 domain AOD65_13770 SM00495 Chitin-binding domain type 3 AOD65_13815 SM00849 Metallo-beta-lactamase superfamily AOD65_13885 SM00341 Helicase and RNase D C-terminal AOD65_13885 SM00487 DEAD-like helicases superfamily AOD65_13885 SM00490 helicase superfamily c-terminal domain AOD65_13885 SM00956 AOD65_13885 AOD65_13935 SM01131 AOD65_13935 AOD65_13965 SM01130 AOD65_13965 AOD65_13985 SM00091 PAS domain AOD65_13985 SM00382 ATPases associated with a variety of cellular activities AOD65_14055 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AOD65_14095 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AOD65_14100 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD65_14100 SM00387 Histidine kinase-like ATPases AOD65_14100 SM00388 His Kinase A (phosphoacceptor) domain AOD65_14105 SM00448 cheY-homologous receiver domain AOD65_14105 SM00862 Transcriptional regulatory protein, C terminal AOD65_14295 SM00382 ATPases associated with a variety of cellular activities AOD65_14370 SM00062 Bacterial periplasmic substrate-binding proteins AOD65_14375 SM00382 ATPases associated with a variety of cellular activities AOD65_14405 SM00028 Tetratricopeptide repeats AOD65_14495 SM00382 ATPases associated with a variety of cellular activities AOD65_14550 SM00830 Chorismate mutase type II AOD65_14585 SM00287 Bacterial SH3 domain homologues AOD65_14635 SM00382 ATPases associated with a variety of cellular activities AOD65_14655 SM01133 AOD65_14655 AOD65_14685 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOD65_14705 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AOD65_14720 SM00346 helix_turn_helix isocitrate lyase regulation AOD65_14740 SM00098 Alkaline phosphatase homologues AOD65_14750 SM00530 Helix-turn-helix XRE-family like proteins AOD65_14775 SM00850 LytTr DNA-binding domain AOD65_14875 SM01060 AOD65_14875 AOD65_14925 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD65_14930 SM00889 Elongation factor G, domain IV AOD65_14955 SM00382 ATPases associated with a variety of cellular activities AOD65_14960 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD65_14970 SM00382 ATPases associated with a variety of cellular activities AOD65_14995 SM00342 helix_turn_helix, arabinose operon control protein AOD65_14995 SM00871 Bacterial transcription activator, effector binding domain AOD65_15020 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD65_15040 SM00387 Histidine kinase-like ATPases AOD65_15040 SM00388 His Kinase A (phosphoacceptor) domain AOD65_15045 SM00448 cheY-homologous receiver domain AOD65_15045 SM00862 Transcriptional regulatory protein, C terminal AOD65_15190 SM00796 Allophanate hydrolase subunit 1 AOD65_15195 SM00346 helix_turn_helix isocitrate lyase regulation AOD65_15215 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOD65_15280 SM00849 Metallo-beta-lactamase superfamily AOD65_15360 SM00870 AOD65_15360 AOD65_15365 SM00530 Helix-turn-helix XRE-family like proteins AOD65_15400 SM00919 Malic enzyme, NAD binding domain AOD65_15400 SM01274 AOD65_15400 AOD65_15430 SM00448 cheY-homologous receiver domain AOD65_15475 SM01060 AOD65_15475 AOD65_15605 SM00382 ATPases associated with a variety of cellular activities AOD65_15630 SM00226 Low molecular weight phosphatase family AOD65_15645 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOD65_15655 SM00028 Tetratricopeptide repeats AOD65_15675 SM00344 helix_turn_helix ASNC type AOD65_15710 SM00342 helix_turn_helix, arabinose operon control protein AOD65_15745 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD65_15785 SM00448 cheY-homologous receiver domain AOD65_15785 SM00862 Transcriptional regulatory protein, C terminal AOD65_15790 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD65_15790 SM00387 Histidine kinase-like ATPases AOD65_15790 SM00388 His Kinase A (phosphoacceptor) domain AOD65_15845 SM00530 Helix-turn-helix XRE-family like proteins AOD65_15895 SM00382 ATPases associated with a variety of cellular activities AOD65_15905 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOD65_15920 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD65_15920 SM00387 Histidine kinase-like ATPases AOD65_15920 SM00388 His Kinase A (phosphoacceptor) domain AOD65_15925 SM00448 cheY-homologous receiver domain AOD65_15925 SM00862 Transcriptional regulatory protein, C terminal AOD65_15935 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD65_16030 SM00354 helix_turn _helix lactose operon repressor AOD65_16035 SM00028 Tetratricopeptide repeats AOD65_16070 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOD65_16070 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD65_16070 SM00319 Homologues of the ligand binding domain of Tar AOD65_16090 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AOD65_16115 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOD65_16160 SM00344 helix_turn_helix ASNC type AOD65_16225 SM00342 helix_turn_helix, arabinose operon control protein AOD65_16240 SM00287 Bacterial SH3 domain homologues AOD65_16290 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD65_16315 SM00382 ATPases associated with a variety of cellular activities AOD65_16325 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOD65_16395 SM00382 ATPases associated with a variety of cellular activities AOD65_16440 SM00530 Helix-turn-helix XRE-family like proteins AOD65_16445 SM01207 AOD65_16445 AOD65_16505 SM00382 ATPases associated with a variety of cellular activities AOD65_16520 SM00530 Helix-turn-helix XRE-family like proteins AOD65_16580 SM01266 AOD65_16580 AOD65_16595 SM00382 ATPases associated with a variety of cellular activities AOD65_16645 SM00028 Tetratricopeptide repeats AOD65_16670 SM01091 Transporter associated domain AOD65_16675 SM00422 helix_turn_helix, mercury resistance AOD65_16715 SM01350 AOD65_16715 AOD65_16720 SM00861 Transketolase, pyrimidine binding domain AOD65_16735 SM00829 Enoylreductase AOD65_16750 SM00829 Enoylreductase AOD65_16770 SM01276 AOD65_16770 AOD65_16815 SM00914 AOD65_16815 AOD65_16850 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD65_16850 SM00866 AOD65_16850 AOD65_16885 SM00849 Metallo-beta-lactamase superfamily AOD65_16950 SM00248 ankyrin repeats AOD65_16955 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOD65_16995 SM00871 Bacterial transcription activator, effector binding domain AOD65_17015 SM00382 ATPases associated with a variety of cellular activities AOD65_17040 SM00849 Metallo-beta-lactamase superfamily AOD65_17045 SM00641 Glycosyl hydrolases family 25 AOD65_17110 SM00849 Metallo-beta-lactamase superfamily AOD65_17245 SM00829 Enoylreductase AOD65_17250 SM00855 Phosphoglycerate mutase family AOD65_17260 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AOD65_17260 SM00534 ATPase domain of DNA mismatch repair MUTS family AOD65_17270 SM00642 Alpha-amylase domain AOD65_17340 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOD65_17345 SM00829 Enoylreductase AOD65_17430 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AOD65_17475 SM00479 AOD65_17475 AOD65_17480 SM00357 Cold shock protein domain AOD65_17505 SM01022 AOD65_17505 AOD65_17615 SM00852 Probable molybdopterin binding domain AOD65_17630 SM00729 Elongator protein 3, MiaB family, Radical SAM AOD65_17650 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AOD65_17650 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AOD65_17760 SM00382 ATPases associated with a variety of cellular activities AOD65_17775 SM00434 DNA Topoisomerase IV AOD65_17780 SM00387 Histidine kinase-like ATPases AOD65_17780 SM00433 TopoisomeraseII AOD65_17790 SM00881 CoA binding domain AOD65_17795 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AOD65_17800 SM00448 cheY-homologous receiver domain AOD65_17800 SM00862 Transcriptional regulatory protein, C terminal AOD65_17815 SM01207 AOD65_17815 AOD65_17830 SM00257 Lysin motif AOD65_17830 SM00636 AOD65_17830 AOD65_17850 SM00479 AOD65_17850 AOD65_17865 SM00382 ATPases associated with a variety of cellular activities AOD65_17910 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AOD65_17975 SM00644 AOD65_17975 AOD65_17975 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. AOD65_17980 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AOD65_17995 SM00091 PAS domain AOD65_17995 SM00387 Histidine kinase-like ATPases AOD65_17995 SM00388 His Kinase A (phosphoacceptor) domain AOD65_18025 SM01058 CarD-like/TRCF domain AOD65_18160 SM00644 AOD65_18160 AOD65_18175 SM00382 ATPases associated with a variety of cellular activities AOD65_18180 SM00382 ATPases associated with a variety of cellular activities AOD65_18195 SM00861 Transketolase, pyrimidine binding domain AOD65_18220 SM00382 ATPases associated with a variety of cellular activities AOD65_18225 SM00062 Bacterial periplasmic substrate-binding proteins AOD65_18245 SM00857 Resolvase, N terminal domain AOD65_18270 SM00028 Tetratricopeptide repeats AOD65_18300 SM00287 Bacterial SH3 domain homologues AOD65_18300 SM00644 AOD65_18300 AOD65_18460 SM00530 Helix-turn-helix XRE-family like proteins AOD65_18540 SM00382 ATPases associated with a variety of cellular activities AOD65_18590 SM00530 Helix-turn-helix XRE-family like proteins AOD65_18595 SM00530 Helix-turn-helix XRE-family like proteins AOD65_18620 SM01230 AOD65_18620 AOD65_18625 SM00422 helix_turn_helix, mercury resistance AOD65_18645 SM00382 ATPases associated with a variety of cellular activities AOD65_18675 SM00287 Bacterial SH3 domain homologues AOD65_18690 SM00420 helix_turn_helix, Deoxyribose operon repressor AOD65_18690 SM01134 AOD65_18690 AOD65_18720 SM00636 AOD65_18720 AOD65_18735 SM00411 bacterial (prokaryotic) histone like domain AOD65_18765 SM00382 ATPases associated with a variety of cellular activities AOD65_18795 SM00342 helix_turn_helix, arabinose operon control protein AOD65_18805 SM00478 endonuclease III AOD65_18840 SM00052 Putative diguanylate phosphodiesterase AOD65_18840 SM00091 PAS domain AOD65_18840 SM00267 diguanylate cyclase AOD65_18870 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD65_18890 SM00148 Phospholipase C, catalytic domain (part); domain X AOD65_18900 SM00257 Lysin motif AOD65_18930 SM00387 Histidine kinase-like ATPases AOD65_18930 SM00388 His Kinase A (phosphoacceptor) domain AOD65_18935 SM00448 cheY-homologous receiver domain AOD65_18935 SM00862 Transcriptional regulatory protein, C terminal AOD65_18950 SM00382 ATPases associated with a variety of cellular activities AOD65_18955 SM00853 MutL C terminal dimerisation domain AOD65_18955 SM01340 AOD65_18955 AOD65_18960 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AOD65_18960 SM00534 ATPase domain of DNA mismatch repair MUTS family AOD65_18975 SM00729 Elongator protein 3, MiaB family, Radical SAM AOD65_19005 SM00322 K homology RNA-binding domain AOD65_19005 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOD65_19020 SM00852 Probable molybdopterin binding domain AOD65_19075 SM00382 ATPases associated with a variety of cellular activities AOD65_19085 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD65_19085 SM00866 AOD65_19085 AOD65_19090 SM00382 ATPases associated with a variety of cellular activities AOD65_19090 SM00843 AOD65_19090 AOD65_19105 SM00849 Metallo-beta-lactamase superfamily AOD65_19115 SM01130 AOD65_19115 AOD65_19125 SM00859 Semialdehyde dehydrogenase, NAD binding domain AOD65_19155 SM00316 Ribosomal protein S1-like RNA-binding domain AOD65_19155 SM00322 K homology RNA-binding domain AOD65_19160 SM01387 AOD65_19160 AOD65_19165 SM00904 Riboflavin kinase AOD65_19200 SM00316 Ribosomal protein S1-like RNA-binding domain AOD65_19200 SM00322 K homology RNA-binding domain AOD65_19210 SM00479 AOD65_19210 AOD65_19210 SM00481 DNA polymerase alpha chain like domain AOD65_19220 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AOD65_19265 SM00382 ATPases associated with a variety of cellular activities AOD65_19265 SM01086 C-terminal, D2-small domain, of ClpB protein AOD65_19285 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AOD65_19285 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AOD65_19285 SM00493 AOD65_19285 AOD65_19295 SM00881 CoA binding domain AOD65_19345 SM00382 ATPases associated with a variety of cellular activities AOD65_19345 SM00962 SRP54-type protein, GTPase domain AOD65_19345 SM00963 SRP54-type protein, helical bundle domain AOD65_19355 SM00382 ATPases associated with a variety of cellular activities AOD65_19355 SM00962 SRP54-type protein, GTPase domain AOD65_19355 SM00963 SRP54-type protein, helical bundle domain AOD65_19360 SM00968 SMC proteins Flexible Hinge Domain AOD65_19365 SM00358 Double-stranded RNA binding motif AOD65_19365 SM00535 Ribonuclease III family AOD65_19375 SM00822 AOD65_19375 AOD65_19380 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AOD65_19395 SM00487 DEAD-like helicases superfamily AOD65_19395 SM00490 helicase superfamily c-terminal domain AOD65_19400 SM01120 AOD65_19400 AOD65_19400 SM01121 AOD65_19400 AOD65_19420 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain AOD65_19435 SM00220 Serine/Threonine protein kinases, catalytic domain AOD65_19435 SM00740 AOD65_19435 AOD65_19440 SM00331 Sigma factor PP2C-like phosphatases AOD65_19440 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AOD65_19465 SM00487 DEAD-like helicases superfamily AOD65_19465 SM00490 helicase superfamily c-terminal domain AOD65_19475 SM01409 AOD65_19475 AOD65_19480 SM00072 Guanylate kinase homologues. AOD65_19495 SM00831 Cation transporter/ATPase, N-terminus AOD65_19540 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AOD65_19555 SM00851 MGS-like domain AOD65_19555 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AOD65_19555 SM01209 AOD65_19555 AOD65_19560 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AOD65_19585 SM00363 S4 RNA-binding domain AOD65_19610 SM00363 S4 RNA-binding domain AOD65_19655 SM00864 Tubulin/FtsZ family, GTPase domain AOD65_19655 SM00865 Tubulin/FtsZ family, C-terminal domain AOD65_19660 SM00842 Cell division protein FtsA AOD65_19700 SM00740 AOD65_19700 AOD65_19705 SM00740 AOD65_19705 AOD65_19735 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains AOD65_19775 SM00530 Helix-turn-helix XRE-family like proteins AOD65_19790 SM00644 AOD65_19790 AOD65_19900 SM00507 HNH nucleases AOD65_19945 SM00530 Helix-turn-helix XRE-family like proteins AOD65_20015 SM00382 ATPases associated with a variety of cellular activities AOD65_20040 SM00530 Helix-turn-helix XRE-family like proteins AOD65_20045 SM00530 Helix-turn-helix XRE-family like proteins AOD65_20055 SM00530 Helix-turn-helix XRE-family like proteins AOD65_20080 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AOD65_20120 SM00855 Phosphoglycerate mutase family AOD65_20185 SM00878 Biotin carboxylase C-terminal domain AOD65_20205 SM00670 Large family of predicted nucleotide-binding domains AOD65_20230 SM00838 Elongation factor G C-terminus AOD65_20310 SM00861 Transketolase, pyrimidine binding domain AOD65_20340 SM00849 Metallo-beta-lactamase superfamily AOD65_20405 SM00052 Putative diguanylate phosphodiesterase AOD65_20500 SM00387 Histidine kinase-like ATPases AOD65_20500 SM00388 His Kinase A (phosphoacceptor) domain AOD65_20515 SM00354 helix_turn _helix lactose operon repressor AOD65_20535 SM00642 Alpha-amylase domain AOD65_20540 SM00642 Alpha-amylase domain AOD65_20545 SM00382 ATPases associated with a variety of cellular activities AOD65_20580 SM00382 ATPases associated with a variety of cellular activities AOD65_20670 SM01007 Class II Aldolase and Adducin N-terminal domain AOD65_20695 SM00267 diguanylate cyclase AOD65_20730 SM01061 CAT RNA binding domain AOD65_20740 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD65_20740 SM00866 AOD65_20740 AOD65_20755 SM00849 Metallo-beta-lactamase superfamily AOD65_20860 SM00387 Histidine kinase-like ATPases AOD65_20870 SM00936 Penicillin-binding protein 5, C-terminal domain AOD65_20875 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD65_20880 SM00382 ATPases associated with a variety of cellular activities AOD65_20900 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD65_20920 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AOD65_21015 SM00354 helix_turn _helix lactose operon repressor AOD65_21035 SM00704 CDGSH-type zinc finger. Function unknown. AOD65_21065 SM00729 Elongator protein 3, MiaB family, Radical SAM AOD65_21065 SM00876 Biotin and Thiamin Synthesis associated domain AOD65_21115 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD65_21150 SM00859 Semialdehyde dehydrogenase, NAD binding domain AOD65_21195 SM00849 Metallo-beta-lactamase superfamily AOD65_21245 SM00382 ATPases associated with a variety of cellular activities AOD65_21255 SM00062 Bacterial periplasmic substrate-binding proteins AOD65_21255 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AOD65_21290 SM00861 Transketolase, pyrimidine binding domain AOD65_21310 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AOD65_21325 SM00091 PAS domain AOD65_21325 SM00382 ATPases associated with a variety of cellular activities AOD65_21350 SM00448 cheY-homologous receiver domain AOD65_21360 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AOD65_21375 SM00363 S4 RNA-binding domain AOD65_21380 SM00861 Transketolase, pyrimidine binding domain AOD65_21415 SM00878 Biotin carboxylase C-terminal domain AOD65_21465 SM00382 ATPases associated with a variety of cellular activities AOD65_21485 SM00841 Elongation factor P, C-terminal AOD65_21485 SM01185 AOD65_21485 AOD65_21520 SM00529 Helix-turn-helix diphteria tox regulatory element AOD65_21540 SM00450 Rhodanese Homology Domain AOD65_21545 SM00354 helix_turn _helix lactose operon repressor AOD65_21580 SM00382 ATPases associated with a variety of cellular activities AOD65_21585 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD65_21615 SM00487 DEAD-like helicases superfamily AOD65_21615 SM00490 helicase superfamily c-terminal domain AOD65_21650 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AOD65_21685 SM00382 ATPases associated with a variety of cellular activities AOD65_21740 SM01018 B12 binding domain AOD65_21775 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOD65_21785 SM00849 Metallo-beta-lactamase superfamily AOD65_21825 SM00382 ATPases associated with a variety of cellular activities AOD65_21890 SM00382 ATPases associated with a variety of cellular activities AOD65_21905 SM00518 AP endonuclease family 2 AOD65_21910 SM00487 DEAD-like helicases superfamily AOD65_21910 SM00490 helicase superfamily c-terminal domain AOD65_21945 SM00400 zinc finger AOD65_21945 SM00493 AOD65_21945 AOD65_21945 SM00766 DNA primase DnaG DnaB-binding AOD65_21965 SM00116 Domain in cystathionine beta-synthase and other proteins. AOD65_22000 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOD65_22035 SM00729 Elongator protein 3, MiaB family, Radical SAM AOD65_22050 SM00271 DnaJ molecular chaperone homology domain AOD65_22070 SM00729 Elongator protein 3, MiaB family, Radical SAM AOD65_22080 SM00838 Elongation factor G C-terminus AOD65_22110 SM00849 Metallo-beta-lactamase superfamily AOD65_22120 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AOD65_22140 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOD65_22150 SM01103 AOD65_22150 AOD65_22205 SM00954 Region found in RelA / SpoT proteins AOD65_22215 SM00098 Alkaline phosphatase homologues AOD65_22240 SM00855 Phosphoglycerate mutase family AOD65_22290 SM00530 Helix-turn-helix XRE-family like proteins AOD65_22315 SM00382 ATPases associated with a variety of cellular activities AOD65_22410 SM00732 Likely ribonuclease with RNase H fold. AOD65_22420 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AOD65_22455 SM00028 Tetratricopeptide repeats AOD65_22475 SM00382 ATPases associated with a variety of cellular activities AOD65_22510 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOD65_22510 SM00954 Region found in RelA / SpoT proteins AOD65_22555 SM01323 AOD65_22555 AOD65_22575 SM00382 ATPases associated with a variety of cellular activities AOD65_22580 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AOD65_22605 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOD65_22620 SM00257 Lysin motif AOD65_22670 SM00382 ATPases associated with a variety of cellular activities AOD65_22675 SM00387 Histidine kinase-like ATPases AOD65_22685 SM00448 cheY-homologous receiver domain AOD65_22685 SM00862 Transcriptional regulatory protein, C terminal AOD65_22695 SM01317 AOD65_22695 AOD65_22785 SM00257 Lysin motif AOD65_22795 SM01004 Delta-aminolevulinic acid dehydratase AOD65_22820 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD65_22835 SM00382 ATPases associated with a variety of cellular activities AOD65_22835 SM00464 Found in ATP-dependent protease La (LON) AOD65_22840 SM00382 ATPases associated with a variety of cellular activities AOD65_22845 SM00382 ATPases associated with a variety of cellular activities AOD65_22845 SM00994 ClpX C4-type zinc finger AOD65_22845 SM01086 C-terminal, D2-small domain, of ClpB protein AOD65_22905 SM00909 Sporulation and spore germination AOD65_22940 SM00421 helix_turn_helix, Lux Regulon AOD65_22980 SM00382 ATPases associated with a variety of cellular activities AOD65_22985 SM00382 ATPases associated with a variety of cellular activities AOD65_22995 SM00342 helix_turn_helix, arabinose operon control protein AOD65_22995 SM00448 cheY-homologous receiver domain AOD65_23015 SM00530 Helix-turn-helix XRE-family like proteins AOD65_23040 SM00382 ATPases associated with a variety of cellular activities AOD65_23090 SM00465 GIY-YIG type nucleases (URI domain) AOD65_23100 SM00893 Electron transfer flavoprotein domain AOD65_23105 SM00893 Electron transfer flavoprotein domain AOD65_23170 SM00382 ATPases associated with a variety of cellular activities AOD65_23175 SM00387 Histidine kinase-like ATPases AOD65_23175 SM00388 His Kinase A (phosphoacceptor) domain AOD65_23180 SM00448 cheY-homologous receiver domain AOD65_23180 SM00862 Transcriptional regulatory protein, C terminal AOD65_23195 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AOD65_23215 SM00382 ATPases associated with a variety of cellular activities AOD65_23230 SM00725 NEAr Transporter domain AOD65_23235 SM00725 NEAr Transporter domain AOD65_23240 SM00725 NEAr Transporter domain AOD65_23250 SM00363 S4 RNA-binding domain AOD65_23260 SM00463 Small MutS-related domain AOD65_23260 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AOD65_23260 SM00534 ATPase domain of DNA mismatch repair MUTS family AOD65_23265 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AOD65_23265 SM00481 DNA polymerase alpha chain like domain AOD65_23265 SM00483 DNA polymerase X family AOD65_23305 SM00873 B3/4 domain AOD65_23305 SM00874 tRNA synthetase B5 domain AOD65_23305 SM00896 Ferredoxin-fold anticodon binding domain AOD65_23315 SM00967 RNA 2'-O ribose methyltransferase substrate binding AOD65_23390 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AOD65_23400 SM00382 ATPases associated with a variety of cellular activities AOD65_23420 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AOD65_23435 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AOD65_23435 SM01232 AOD65_23435 AOD65_23440 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AOD65_23440 SM00474 3'-5' exonuclease AOD65_23440 SM00475 5'-3' exonuclease AOD65_23440 SM00482 DNA polymerase A domain AOD65_23445 SM00091 PAS domain AOD65_23445 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD65_23445 SM00387 Histidine kinase-like ATPases AOD65_23445 SM00388 His Kinase A (phosphoacceptor) domain AOD65_23450 SM00448 cheY-homologous receiver domain AOD65_23450 SM00862 Transcriptional regulatory protein, C terminal AOD65_23470 SM01329 AOD65_23470 AOD65_23520 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD65_23525 SM00919 Malic enzyme, NAD binding domain AOD65_23525 SM01274 AOD65_23525 AOD65_23530 SM00481 DNA polymerase alpha chain like domain AOD65_23565 SM00116 Domain in cystathionine beta-synthase and other proteins. AOD65_23575 SM00849 Metallo-beta-lactamase superfamily AOD65_23630 SM00530 Helix-turn-helix XRE-family like proteins AOD65_23640 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AOD65_23640 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AOD65_23760 SM00981 AOD65_23760 AOD65_23800 SM00363 S4 RNA-binding domain AOD65_23800 SM01390 AOD65_23800 AOD65_23815 SM00363 S4 RNA-binding domain AOD65_23845 SM00116 Domain in cystathionine beta-synthase and other proteins. AOD65_23860 SM00448 cheY-homologous receiver domain AOD65_23860 SM00862 Transcriptional regulatory protein, C terminal AOD65_23865 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD65_23865 SM00387 Histidine kinase-like ATPases AOD65_23865 SM00388 His Kinase A (phosphoacceptor) domain AOD65_23870 SM00248 ankyrin repeats AOD65_23905 SM00354 helix_turn _helix lactose operon repressor AOD65_23965 SM00843 AOD65_23965 AOD65_24005 SM00849 Metallo-beta-lactamase superfamily AOD65_24025 SM00642 Alpha-amylase domain AOD65_24050 SM00420 helix_turn_helix, Deoxyribose operon repressor AOD65_24055 SM00363 S4 RNA-binding domain AOD65_24075 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOD65_24100 SM01058 CarD-like/TRCF domain AOD65_24135 SM00852 Probable molybdopterin binding domain AOD65_24170 SM00450 Rhodanese Homology Domain AOD65_24250 SM00382 ATPases associated with a variety of cellular activities AOD65_24270 SM00729 Elongator protein 3, MiaB family, Radical SAM AOD65_24280 SM00382 ATPases associated with a variety of cellular activities AOD65_24320 SM00014 Acid phosphatase homologues AOD65_24335 SM00852 Probable molybdopterin binding domain AOD65_24395 SM00387 Histidine kinase-like ATPases AOD65_24400 SM00387 Histidine kinase-like ATPases AOD65_24400 SM00388 His Kinase A (phosphoacceptor) domain AOD65_24430 SM00382 ATPases associated with a variety of cellular activities AOD65_24485 SM01234 AOD65_24485 AOD65_24490 SM00947 Carbonic anhydrase AOD65_24510 SM00894 Excalibur calcium-binding domain AOD65_24570 SM00899 AOD65_24570 AOD65_24580 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD65_24580 SM00387 Histidine kinase-like ATPases AOD65_24580 SM00388 His Kinase A (phosphoacceptor) domain AOD65_24585 SM00448 cheY-homologous receiver domain AOD65_24585 SM00862 Transcriptional regulatory protein, C terminal AOD65_24615 SM00046 Diacylglycerol kinase catalytic domain (presumed) AOD65_24665 SM00382 ATPases associated with a variety of cellular activities AOD65_24670 SM00342 helix_turn_helix, arabinose operon control protein AOD65_24670 SM00871 Bacterial transcription activator, effector binding domain AOD65_24675 SM00448 cheY-homologous receiver domain AOD65_24675 SM00862 Transcriptional regulatory protein, C terminal AOD65_24680 SM00387 Histidine kinase-like ATPases AOD65_24705 SM00382 ATPases associated with a variety of cellular activities AOD65_24725 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOD65_24725 SM00866 AOD65_24725 AOD65_24765 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD65_24765 SM00387 Histidine kinase-like ATPases AOD65_24765 SM00388 His Kinase A (phosphoacceptor) domain AOD65_24770 SM00448 cheY-homologous receiver domain AOD65_24770 SM00862 Transcriptional regulatory protein, C terminal AOD65_24775 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AOD65_24815 SM00357 Cold shock protein domain AOD65_24855 SM00642 Alpha-amylase domain AOD65_25020 SM00316 Ribosomal protein S1-like RNA-binding domain AOD65_25030 SM00344 helix_turn_helix ASNC type AOD65_25065 SM01298 AOD65_25065 AOD65_25070 SM00479 AOD65_25070 AOD65_25165 SM00871 Bacterial transcription activator, effector binding domain AOD65_25225 SM00382 ATPases associated with a variety of cellular activities AOD65_25250 SM00860 SMI1 / KNR4 family AOD65_25320 SM00420 helix_turn_helix, Deoxyribose operon repressor AOD65_25360 SM00422 helix_turn_helix, mercury resistance AOD65_25375 SM00855 Phosphoglycerate mutase family AOD65_25385 SM00729 Elongator protein 3, MiaB family, Radical SAM AOD65_25450 SM00382 ATPases associated with a variety of cellular activities AOD65_25470 SM00382 ATPases associated with a variety of cellular activities AOD65_25470 SM00930 AOD65_25470 AOD65_25490 SM00493 AOD65_25490 AOD65_25575 SM00849 Metallo-beta-lactamase superfamily AOD65_25625 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOD65_25625 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD65_25695 SM00530 Helix-turn-helix XRE-family like proteins AOD65_25720 SM00448 cheY-homologous receiver domain AOD65_25720 SM00862 Transcriptional regulatory protein, C terminal AOD65_25725 SM00387 Histidine kinase-like ATPases AOD65_25725 SM00388 His Kinase A (phosphoacceptor) domain AOD65_25745 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOD65_25745 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD65_25765 SM00347 helix_turn_helix multiple antibiotic resistance protein AOD65_25895 SM00363 S4 RNA-binding domain AOD65_25905 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain AOD65_25910 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOD65_25960 SM00382 ATPases associated with a variety of cellular activities AOD65_25980 SM00448 cheY-homologous receiver domain AOD65_25980 SM00862 Transcriptional regulatory protein, C terminal AOD65_25990 SM00316 Ribosomal protein S1-like RNA-binding domain AOD65_25990 SM00357 Cold shock protein domain AOD65_25990 SM00955 AOD65_25990 AOD65_26100 SM00507 HNH nucleases AOD65_26135 SM01192 AOD65_26135 AOD65_26135 SM01193 AOD65_26135 AOD65_26155 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AOD65_26255 SM00028 Tetratricopeptide repeats AOD65_26295 SM00487 DEAD-like helicases superfamily AOD65_26295 SM00490 helicase superfamily c-terminal domain AOD65_26315 SM00422 helix_turn_helix, mercury resistance AOD65_26335 SM00530 Helix-turn-helix XRE-family like proteins AOD65_26350 SM00422 helix_turn_helix, mercury resistance AOD65_26360 SM00382 ATPases associated with a variety of cellular activities AOD65_26370 SM00382 ATPases associated with a variety of cellular activities AOD65_26380 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AOD65_26380 SM00245 tail specific protease AOD65_26390 SM00382 ATPases associated with a variety of cellular activities AOD65_26405 SM00937 AOD65_26405 AOD65_26410 SM00957 SecA DEAD-like domain AOD65_26410 SM00958 SecA preprotein cross-linking domain AOD65_26420 SM00357 Cold shock protein domain AOD65_26430 SM00487 DEAD-like helicases superfamily AOD65_26430 SM00490 helicase superfamily c-terminal domain AOD65_26470 SM00984 UDP binding domain AOD65_26485 SM00382 ATPases associated with a variety of cellular activities AOD65_26490 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. AOD65_26675 SM00287 Bacterial SH3 domain homologues AOD65_26705 SM00487 DEAD-like helicases superfamily AOD65_26705 SM00490 helicase superfamily c-terminal domain AOD65_26750 SM00382 ATPases associated with a variety of cellular activities AOD65_26760 SM00530 Helix-turn-helix XRE-family like proteins AOD65_26785 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD65_26785 SM00387 Histidine kinase-like ATPases AOD65_26785 SM00388 His Kinase A (phosphoacceptor) domain AOD65_26790 SM00448 cheY-homologous receiver domain AOD65_26790 SM00862 Transcriptional regulatory protein, C terminal AOD65_26815 SM00287 Bacterial SH3 domain homologues AOD65_26815 SM00382 ATPases associated with a variety of cellular activities AOD65_26825 SM00984 UDP binding domain AOD65_26895 SM00382 ATPases associated with a variety of cellular activities AOD65_26900 SM00850 LytTr DNA-binding domain AOD65_26985 SM00052 Putative diguanylate phosphodiesterase AOD65_26985 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AOD65_26985 SM00091 PAS domain AOD65_26985 SM00267 diguanylate cyclase AOD65_27005 SM00382 ATPases associated with a variety of cellular activities AOD65_27075 SM00226 Low molecular weight phosphatase family AOD65_27090 SM00903 Flavin reductase like domain AOD65_27125 SM00937 AOD65_27125 AOD65_27140 SM00357 Cold shock protein domain AOD65_27140 SM00382 ATPases associated with a variety of cellular activities AOD65_27140 SM00959 Rho termination factor, N-terminal domain AOD65_27160 SM00448 cheY-homologous receiver domain AOD65_27210 SM00155 Phospholipase D. Active site motifs. AOD65_27220 SM00052 Putative diguanylate phosphodiesterase AOD65_27220 SM00267 diguanylate cyclase AOD65_27230 SM00530 Helix-turn-helix XRE-family like proteins AOD65_27235 SM00421 helix_turn_helix, Lux Regulon AOD65_27235 SM00448 cheY-homologous receiver domain AOD65_27240 SM00387 Histidine kinase-like ATPases AOD65_27250 SM00382 ATPases associated with a variety of cellular activities AOD65_27300 SM00836 DALR anticodon binding domain AOD65_27300 SM01016 Arginyl tRNA synthetase N terminal dom AOD65_27345 SM00422 helix_turn_helix, mercury resistance AOD65_27375 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOD65_27385 SM00382 ATPases associated with a variety of cellular activities AOD65_27435 SM00936 Penicillin-binding protein 5, C-terminal domain AOD65_27480 SM00986 Uracil DNA glycosylase superfamily AOD65_27480 SM00987 UreE urease accessory protein, C-terminal domain AOD65_27490 SM00382 ATPases associated with a variety of cellular activities AOD65_27500 SM00354 helix_turn _helix lactose operon repressor AOD65_27535 SM00100 Cyclic nucleotide-monophosphate binding domain AOD65_27545 SM00421 helix_turn_helix, Lux Regulon AOD65_27545 SM00448 cheY-homologous receiver domain AOD65_27560 SM00267 diguanylate cyclase AOD65_27575 SM00448 cheY-homologous receiver domain AOD65_27575 SM00850 LytTr DNA-binding domain AOD65_27605 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOD65_27630 SM00382 ATPases associated with a variety of cellular activities AOD65_27695 SM00448 cheY-homologous receiver domain AOD65_27695 SM00850 LytTr DNA-binding domain AOD65_27700 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AOD65_27700 SM00387 Histidine kinase-like ATPases AOD65_27755 SM00487 DEAD-like helicases superfamily AOD65_27755 SM00490 helicase superfamily c-terminal domain AOD65_27765 SM01240 AOD65_27765 AOD65_27790 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AOD65_27795 SM00849 Metallo-beta-lactamase superfamily AOD65_27810 SM00091 PAS domain AOD65_27810 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOD65_27810 SM00387 Histidine kinase-like ATPases AOD65_27810 SM00388 His Kinase A (phosphoacceptor) domain AOD65_27815 SM00448 cheY-homologous receiver domain AOD65_27815 SM00862 Transcriptional regulatory protein, C terminal AOD65_27840 SM00788 Adenylosuccinate synthetase AOD65_27855 SM00267 diguanylate cyclase AOD65_27900 SM00470 ParB-like nuclease domain AOD65_27910 SM00470 ParB-like nuclease domain AOD65_27920 SM01228 AOD65_27920 AOD65_27930 SM00393 Putative single-stranded nucleic acids-binding domain AOD65_27930 SM01245 AOD65_27930