AOQ80_00005 SM00382 ATPases associated with a variety of cellular activities AOQ80_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain AOQ80_00010 SM00480 DNA polymerase III beta subunit AOQ80_00025 SM00387 Histidine kinase-like ATPases AOQ80_00025 SM00433 TopoisomeraseII AOQ80_00030 SM00434 DNA Topoisomerase IV AOQ80_00065 SM00116 Domain in cystathionine beta-synthase and other proteins. AOQ80_00065 SM01240 AOQ80_00065 AOQ80_00070 SM00936 Penicillin-binding protein 5, C-terminal domain AOQ80_00125 SM00382 ATPases associated with a variety of cellular activities AOQ80_00135 SM00493 AOQ80_00135 AOQ80_00220 SM00966 SpoVT / AbrB like domain AOQ80_00235 SM00493 AOQ80_00235 AOQ80_00240 SM00650 Ribosomal RNA adenine dimethylases AOQ80_00285 SM01400 AOQ80_00285 AOQ80_00300 SM00487 DEAD-like helicases superfamily AOQ80_00300 SM00490 helicase superfamily c-terminal domain AOQ80_00300 SM00982 AOQ80_00300 AOQ80_00300 SM01058 CarD-like/TRCF domain AOQ80_00305 SM00966 SpoVT / AbrB like domain AOQ80_00320 SM00363 S4 RNA-binding domain AOQ80_00340 SM00316 Ribosomal protein S1-like RNA-binding domain AOQ80_00355 SM00331 Sigma factor PP2C-like phosphatases AOQ80_00355 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AOQ80_00360 SM00977 TilS substrate C-terminal domain AOQ80_00370 SM00382 ATPases associated with a variety of cellular activities AOQ80_00410 SM00905 Dihydroneopterin aldolase AOQ80_00420 SM00530 Helix-turn-helix XRE-family like proteins AOQ80_00465 SM00382 ATPases associated with a variety of cellular activities AOQ80_00465 SM01086 C-terminal, D2-small domain, of ClpB protein AOQ80_00470 SM00382 ATPases associated with a variety of cellular activities AOQ80_00480 SM00670 Large family of predicted nucleotide-binding domains AOQ80_00505 SM00840 AOQ80_00505 AOQ80_00510 SM00535 Ribonuclease III family AOQ80_00515 SM00967 RNA 2'-O ribose methyltransferase substrate binding AOQ80_00525 SM00421 helix_turn_helix, Lux Regulon AOQ80_00540 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AOQ80_00545 SM00649 Ribosomal protein L11/L12 AOQ80_00575 SM00663 RNA polymerase I subunit A N-terminus AOQ80_00595 SM00838 Elongation factor G C-terminus AOQ80_00595 SM00889 Elongation factor G, domain IV AOQ80_00605 SM01403 AOQ80_00605 AOQ80_00625 SM01382 AOQ80_00625 AOQ80_00625 SM01383 AOQ80_00625 AOQ80_00640 SM00322 K homology RNA-binding domain AOQ80_00660 SM01374 AOQ80_00660 AOQ80_00665 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AOQ80_00725 SM00316 Ribosomal protein S1-like RNA-binding domain AOQ80_00745 SM00662 RNA polymerases D AOQ80_00755 SM00382 ATPases associated with a variety of cellular activities AOQ80_00760 SM00382 ATPases associated with a variety of cellular activities AOQ80_00790 SM00646 AOQ80_00790 AOQ80_00805 SM01251 AOQ80_00805 AOQ80_00925 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOQ80_00925 SM00895 AOQ80_00925 AOQ80_00940 SM01350 AOQ80_00940 AOQ80_00990 SM00382 ATPases associated with a variety of cellular activities AOQ80_00990 SM00930 AOQ80_00990 AOQ80_01000 SM00829 Enoylreductase AOQ80_01050 SM00382 ATPases associated with a variety of cellular activities AOQ80_01055 SM00382 ATPases associated with a variety of cellular activities AOQ80_01070 SM00342 helix_turn_helix, arabinose operon control protein AOQ80_01165 SM00563 Phosphate acyltransferases AOQ80_01175 SM00354 helix_turn _helix lactose operon repressor AOQ80_01230 SM00382 ATPases associated with a variety of cellular activities AOQ80_01260 SM00382 ATPases associated with a variety of cellular activities AOQ80_01265 SM00382 ATPases associated with a variety of cellular activities AOQ80_01325 SM00487 DEAD-like helicases superfamily AOQ80_01325 SM00490 helicase superfamily c-terminal domain AOQ80_01350 SM01005 Alanine racemase, C-terminal domain AOQ80_01365 SM00316 Ribosomal protein S1-like RNA-binding domain AOQ80_01365 SM00732 Likely ribonuclease with RNase H fold. AOQ80_01375 SM00731 SprT homologues. AOQ80_01480 SM00382 ATPases associated with a variety of cellular activities AOQ80_01485 SM00881 CoA binding domain AOQ80_01500 SM00883 Chaperonin 10 Kd subunit AOQ80_01520 SM00448 cheY-homologous receiver domain AOQ80_01520 SM00862 Transcriptional regulatory protein, C terminal AOQ80_01525 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ80_01525 SM00387 Histidine kinase-like ATPases AOQ80_01525 SM00388 His Kinase A (phosphoacceptor) domain AOQ80_01605 SM00382 ATPases associated with a variety of cellular activities AOQ80_01610 SM00387 Histidine kinase-like ATPases AOQ80_01610 SM00388 His Kinase A (phosphoacceptor) domain AOQ80_01615 SM00448 cheY-homologous receiver domain AOQ80_01615 SM00862 Transcriptional regulatory protein, C terminal AOQ80_01635 SM01001 AIR carboxylase AOQ80_01645 SM00998 Adenylosuccinate lyase C-terminus AOQ80_01660 SM01211 AOQ80_01660 AOQ80_01685 SM00798 AICARFT/IMPCHase bienzyme AOQ80_01685 SM00851 MGS-like domain AOQ80_01690 SM01209 AOQ80_01690 AOQ80_01690 SM01210 AOQ80_01690 AOQ80_01700 SM00244 prohibitin homologues AOQ80_01720 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AOQ80_01720 SM00292 breast cancer carboxy-terminal domain AOQ80_01720 SM00532 Ligase N family AOQ80_01750 SM00382 ATPases associated with a variety of cellular activities AOQ80_01750 SM00930 AOQ80_01750 AOQ80_01780 SM00347 helix_turn_helix multiple antibiotic resistance protein AOQ80_01800 SM00845 GatB domain AOQ80_01805 SM00046 Diacylglycerol kinase catalytic domain (presumed) AOQ80_01820 SM00382 ATPases associated with a variety of cellular activities AOQ80_01885 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AOQ80_01930 SM01007 Class II Aldolase and Adducin N-terminal domain AOQ80_02045 SM00062 Bacterial periplasmic substrate-binding proteins AOQ80_02045 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AOQ80_02050 SM00382 ATPases associated with a variety of cellular activities AOQ80_02060 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOQ80_02060 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ80_02065 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOQ80_02065 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ80_02070 SM00642 Alpha-amylase domain AOQ80_02090 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AOQ80_02090 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AOQ80_02090 SM00493 AOQ80_02090 AOQ80_02110 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOQ80_02110 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ80_02130 SM00382 ATPases associated with a variety of cellular activities AOQ80_02135 SM00382 ATPases associated with a variety of cellular activities AOQ80_02140 SM00060 Fibronectin type 3 domain AOQ80_02140 SM00636 AOQ80_02140 AOQ80_02140 SM00637 AOQ80_02140 AOQ80_02170 SM00530 Helix-turn-helix XRE-family like proteins AOQ80_02195 SM00946 Prolyl-tRNA synthetase, C-terminal AOQ80_02240 SM00831 Cation transporter/ATPase, N-terminus AOQ80_02250 SM00226 Low molecular weight phosphatase family AOQ80_02345 SM00478 endonuclease III AOQ80_02360 SM00530 Helix-turn-helix XRE-family like proteins AOQ80_02375 SM00530 Helix-turn-helix XRE-family like proteins AOQ80_02380 SM00530 Helix-turn-helix XRE-family like proteins AOQ80_02410 SM00382 ATPases associated with a variety of cellular activities AOQ80_02645 SM00382 ATPases associated with a variety of cellular activities AOQ80_02665 SM00530 Helix-turn-helix XRE-family like proteins AOQ80_02725 SM00984 UDP binding domain AOQ80_02810 SM00478 endonuclease III AOQ80_02810 SM00525 AOQ80_02810 AOQ80_02835 SM00382 ATPases associated with a variety of cellular activities AOQ80_02855 SM00382 ATPases associated with a variety of cellular activities AOQ80_03010 SM00567 E-Z type HEAT repeats AOQ80_03025 SM00052 Putative diguanylate phosphodiesterase AOQ80_03025 SM00091 PAS domain AOQ80_03025 SM00267 diguanylate cyclase AOQ80_03035 SM00763 PrkA AAA domain AOQ80_03050 SM00364 Leucine-rich repeats, bacterial type AOQ80_03050 SM00365 Leucine-rich repeat, SDS22-like subfamily AOQ80_03050 SM00369 Leucine-rich repeats, typical (most populated) subfamily AOQ80_03050 SM00725 NEAr Transporter domain AOQ80_03065 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AOQ80_03075 SM00244 prohibitin homologues AOQ80_03080 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOQ80_03080 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ80_03085 SM00091 PAS domain AOQ80_03085 SM00387 Histidine kinase-like ATPases AOQ80_03110 SM00248 ankyrin repeats AOQ80_03120 SM00382 ATPases associated with a variety of cellular activities AOQ80_03145 SM00448 cheY-homologous receiver domain AOQ80_03145 SM00862 Transcriptional regulatory protein, C terminal AOQ80_03150 SM00387 Histidine kinase-like ATPases AOQ80_03150 SM00388 His Kinase A (phosphoacceptor) domain AOQ80_03165 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOQ80_03165 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ80_03170 SM00387 Histidine kinase-like ATPases AOQ80_03175 SM00448 cheY-homologous receiver domain AOQ80_03185 SM00919 Malic enzyme, NAD binding domain AOQ80_03185 SM01274 AOQ80_03185 AOQ80_03200 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOQ80_03210 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ80_03210 SM00387 Histidine kinase-like ATPases AOQ80_03210 SM00388 His Kinase A (phosphoacceptor) domain AOQ80_03215 SM00448 cheY-homologous receiver domain AOQ80_03215 SM00862 Transcriptional regulatory protein, C terminal AOQ80_03235 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AOQ80_03235 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AOQ80_03250 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AOQ80_03250 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AOQ80_03260 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOQ80_03335 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOQ80_03365 SM00382 ATPases associated with a variety of cellular activities AOQ80_03390 SM00327 von Willebrand factor (vWF) type A domain AOQ80_03395 SM00382 ATPases associated with a variety of cellular activities AOQ80_03400 SM00155 Phospholipase D. Active site motifs. AOQ80_03415 SM00052 Putative diguanylate phosphodiesterase AOQ80_03415 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AOQ80_03415 SM00091 PAS domain AOQ80_03415 SM00267 diguanylate cyclase AOQ80_03425 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOQ80_03425 SM00866 AOQ80_03425 AOQ80_03435 SM00642 Alpha-amylase domain AOQ80_03470 SM00382 ATPases associated with a variety of cellular activities AOQ80_03475 SM00062 Bacterial periplasmic substrate-binding proteins AOQ80_03475 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AOQ80_03525 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ80_03525 SM00387 Histidine kinase-like ATPases AOQ80_03525 SM00388 His Kinase A (phosphoacceptor) domain AOQ80_03530 SM00448 cheY-homologous receiver domain AOQ80_03530 SM00862 Transcriptional regulatory protein, C terminal AOQ80_03570 SM00382 ATPases associated with a variety of cellular activities AOQ80_03585 SM00347 helix_turn_helix multiple antibiotic resistance protein AOQ80_03600 SM00354 helix_turn _helix lactose operon repressor AOQ80_03615 SM00382 ATPases associated with a variety of cellular activities AOQ80_03650 SM00829 Enoylreductase AOQ80_03660 SM00770 Zinc dependent phospholipase C (alpha toxin) AOQ80_03695 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOQ80_03705 SM00530 Helix-turn-helix XRE-family like proteins AOQ80_03750 SM00530 Helix-turn-helix XRE-family like proteins AOQ80_03850 SM00899 AOQ80_03850 AOQ80_03990 SM00116 Domain in cystathionine beta-synthase and other proteins. AOQ80_04010 SM00287 Bacterial SH3 domain homologues AOQ80_04020 SM00382 ATPases associated with a variety of cellular activities AOQ80_04105 SM00347 helix_turn_helix multiple antibiotic resistance protein AOQ80_04145 SM00640 Glycosyl hydrolases family 32 AOQ80_04155 SM00354 helix_turn _helix lactose operon repressor AOQ80_04225 SM00347 helix_turn_helix multiple antibiotic resistance protein AOQ80_04240 SM00450 Rhodanese Homology Domain AOQ80_04250 SM00450 Rhodanese Homology Domain AOQ80_04255 SM00450 Rhodanese Homology Domain AOQ80_04255 SM00849 Metallo-beta-lactamase superfamily AOQ80_04265 SM00450 Rhodanese Homology Domain AOQ80_04270 SM00450 Rhodanese Homology Domain AOQ80_04295 SM00829 Enoylreductase AOQ80_04345 SM00287 Bacterial SH3 domain homologues AOQ80_04355 SM00382 ATPases associated with a variety of cellular activities AOQ80_04410 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen AOQ80_04510 SM00344 helix_turn_helix ASNC type AOQ80_04575 SM01060 AOQ80_04575 AOQ80_04610 SM00382 ATPases associated with a variety of cellular activities AOQ80_04620 SM00062 Bacterial periplasmic substrate-binding proteins AOQ80_04620 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AOQ80_04630 SM00382 ATPases associated with a variety of cellular activities AOQ80_04710 SM00729 Elongator protein 3, MiaB family, Radical SAM AOQ80_04745 SM00957 SecA DEAD-like domain AOQ80_04745 SM00958 SecA preprotein cross-linking domain AOQ80_04760 SM00635 Bacterial Ig-like domain 2 AOQ80_04820 SM00646 AOQ80_04820 AOQ80_04890 SM00382 ATPases associated with a variety of cellular activities AOQ80_04905 SM00860 SMI1 / KNR4 family AOQ80_04910 SM00860 SMI1 / KNR4 family AOQ80_04925 SM00091 PAS domain AOQ80_04925 SM00387 Histidine kinase-like ATPases AOQ80_04930 SM00448 cheY-homologous receiver domain AOQ80_04965 SM00422 helix_turn_helix, mercury resistance AOQ80_05090 SM00347 helix_turn_helix multiple antibiotic resistance protein AOQ80_05160 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOQ80_05180 SM00460 Transglutaminase/protease-like homologues AOQ80_05245 SM00331 Sigma factor PP2C-like phosphatases AOQ80_05245 SM00448 cheY-homologous receiver domain AOQ80_05250 SM00138 Methyltransferase, chemotaxis proteins AOQ80_05255 SM00387 Histidine kinase-like ATPases AOQ80_05255 SM00388 His Kinase A (phosphoacceptor) domain AOQ80_05255 SM00448 cheY-homologous receiver domain AOQ80_05295 SM00829 Enoylreductase AOQ80_05335 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOQ80_05360 SM00028 Tetratricopeptide repeats AOQ80_05430 SM00347 helix_turn_helix multiple antibiotic resistance protein AOQ80_05480 SM00347 helix_turn_helix multiple antibiotic resistance protein AOQ80_05495 SM00382 ATPases associated with a variety of cellular activities AOQ80_05560 SM00422 helix_turn_helix, mercury resistance AOQ80_05675 SM00849 Metallo-beta-lactamase superfamily AOQ80_05700 SM00725 NEAr Transporter domain AOQ80_05770 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOQ80_05785 SM00342 helix_turn_helix, arabinose operon control protein AOQ80_05785 SM00871 Bacterial transcription activator, effector binding domain AOQ80_05800 SM00387 Histidine kinase-like ATPases AOQ80_05800 SM00388 His Kinase A (phosphoacceptor) domain AOQ80_05805 SM00448 cheY-homologous receiver domain AOQ80_05805 SM00862 Transcriptional regulatory protein, C terminal AOQ80_05835 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOQ80_05835 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ80_05875 SM00357 Cold shock protein domain AOQ80_05990 SM01060 AOQ80_05990 AOQ80_06005 SM00642 Alpha-amylase domain AOQ80_06010 SM00530 Helix-turn-helix XRE-family like proteins AOQ80_06020 SM00316 Ribosomal protein S1-like RNA-binding domain AOQ80_06070 SM00382 ATPases associated with a variety of cellular activities AOQ80_06070 SM01086 C-terminal, D2-small domain, of ClpB protein AOQ80_06100 SM00825 Beta-ketoacyl synthase AOQ80_06140 SM00382 ATPases associated with a variety of cellular activities AOQ80_06145 SM00382 ATPases associated with a variety of cellular activities AOQ80_06185 SM00155 Phospholipase D. Active site motifs. AOQ80_06215 SM01118 AOQ80_06215 AOQ80_06225 SM00954 Region found in RelA / SpoT proteins AOQ80_06380 SM00635 Bacterial Ig-like domain 2 AOQ80_06495 SM00861 Transketolase, pyrimidine binding domain AOQ80_06500 SM00530 Helix-turn-helix XRE-family like proteins AOQ80_06595 SM00530 Helix-turn-helix XRE-family like proteins AOQ80_06615 SM00382 ATPases associated with a variety of cellular activities AOQ80_06635 SM00014 Acid phosphatase homologues AOQ80_06685 SM00448 cheY-homologous receiver domain AOQ80_06685 SM00862 Transcriptional regulatory protein, C terminal AOQ80_06690 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ80_06690 SM00387 Histidine kinase-like ATPases AOQ80_06690 SM00388 His Kinase A (phosphoacceptor) domain AOQ80_06695 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOQ80_06695 SM00895 AOQ80_06695 AOQ80_06765 SM00822 AOQ80_06765 AOQ80_06830 SM00420 helix_turn_helix, Deoxyribose operon repressor AOQ80_06830 SM01134 AOQ80_06830 AOQ80_06865 SM00387 Histidine kinase-like ATPases AOQ80_06865 SM00388 His Kinase A (phosphoacceptor) domain AOQ80_06870 SM00347 helix_turn_helix multiple antibiotic resistance protein AOQ80_06890 SM00387 Histidine kinase-like ATPases AOQ80_06890 SM00388 His Kinase A (phosphoacceptor) domain AOQ80_06960 SM00465 GIY-YIG type nucleases (URI domain) AOQ80_06960 SM00496 Intron-encoded nuclease repeat 2 AOQ80_06975 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOQ80_06980 SM00382 ATPases associated with a variety of cellular activities AOQ80_06990 SM00382 ATPases associated with a variety of cellular activities AOQ80_07010 SM00344 helix_turn_helix ASNC type AOQ80_07130 SM00347 helix_turn_helix multiple antibiotic resistance protein AOQ80_07205 SM00917 LeuA allosteric (dimerisation) domain AOQ80_07210 SM01329 AOQ80_07210 AOQ80_07395 SM00387 Histidine kinase-like ATPases AOQ80_07400 SM00421 helix_turn_helix, Lux Regulon AOQ80_07400 SM00448 cheY-homologous receiver domain AOQ80_07495 SM00091 PAS domain AOQ80_07495 SM00388 His Kinase A (phosphoacceptor) domain AOQ80_07515 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ80_07515 SM00387 Histidine kinase-like ATPases AOQ80_07515 SM00388 His Kinase A (phosphoacceptor) domain AOQ80_07570 SM00363 S4 RNA-binding domain AOQ80_07590 SM00448 cheY-homologous receiver domain AOQ80_07590 SM00862 Transcriptional regulatory protein, C terminal AOQ80_07595 SM00091 PAS domain AOQ80_07595 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ80_07595 SM00387 Histidine kinase-like ATPases AOQ80_07595 SM00388 His Kinase A (phosphoacceptor) domain AOQ80_07605 SM00257 Lysin motif AOQ80_07630 SM00487 DEAD-like helicases superfamily AOQ80_07630 SM00490 helicase superfamily c-terminal domain AOQ80_07640 SM00257 Lysin motif AOQ80_07650 SM00422 helix_turn_helix, mercury resistance AOQ80_07660 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AOQ80_07675 SM00644 AOQ80_07675 AOQ80_07685 SM00870 AOQ80_07685 AOQ80_07700 SM00316 Ribosomal protein S1-like RNA-binding domain AOQ80_07705 SM01240 AOQ80_07705 AOQ80_07760 SM00411 bacterial (prokaryotic) histone like domain AOQ80_07785 SM00562 AOQ80_07785 AOQ80_07805 SM00028 Tetratricopeptide repeats AOQ80_07810 SM00914 AOQ80_07810 AOQ80_07855 SM00986 Uracil DNA glycosylase superfamily AOQ80_07855 SM00987 UreE urease accessory protein, C-terminal domain AOQ80_07880 SM00851 MGS-like domain AOQ80_07930 SM00479 AOQ80_07930 AOQ80_07930 SM00487 DEAD-like helicases superfamily AOQ80_07930 SM00491 AOQ80_07930 AOQ80_07955 SM00478 endonuclease III AOQ80_07955 SM00525 AOQ80_07955 AOQ80_07965 SM00060 Fibronectin type 3 domain AOQ80_08015 SM00981 AOQ80_08015 AOQ80_08025 SM00491 AOQ80_08025 AOQ80_08085 SM00450 Rhodanese Homology Domain AOQ80_08115 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AOQ80_08115 SM00475 5'-3' exonuclease AOQ80_08225 SM00357 Cold shock protein domain AOQ80_08275 SM00849 Metallo-beta-lactamase superfamily AOQ80_08280 SM00422 helix_turn_helix, mercury resistance AOQ80_08280 SM00871 Bacterial transcription activator, effector binding domain AOQ80_08370 SM00448 cheY-homologous receiver domain AOQ80_08395 SM00138 Methyltransferase, chemotaxis proteins AOQ80_08480 SM00382 ATPases associated with a variety of cellular activities AOQ80_08545 SM00028 Tetratricopeptide repeats AOQ80_08565 SM00028 Tetratricopeptide repeats AOQ80_08650 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AOQ80_08705 SM00530 Helix-turn-helix XRE-family like proteins AOQ80_08725 SM00382 ATPases associated with a variety of cellular activities AOQ80_08740 SM00849 Metallo-beta-lactamase superfamily AOQ80_08740 SM01027 Beta-Casp domain AOQ80_08760 SM00835 Cupin AOQ80_08775 SM00855 Phosphoglycerate mutase family AOQ80_08835 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOQ80_08835 SM00895 AOQ80_08835 AOQ80_08845 SM00833 Cobalamin synthesis protein cobW C-terminal domain AOQ80_08935 SM00530 Helix-turn-helix XRE-family like proteins AOQ80_08980 SM00421 helix_turn_helix, Lux Regulon AOQ80_08980 SM00448 cheY-homologous receiver domain AOQ80_08990 SM00382 ATPases associated with a variety of cellular activities AOQ80_09005 SM00155 Phospholipase D. Active site motifs. AOQ80_09025 SM00919 Malic enzyme, NAD binding domain AOQ80_09025 SM01274 AOQ80_09025 AOQ80_09030 SM00387 Histidine kinase-like ATPases AOQ80_09035 SM00448 cheY-homologous receiver domain AOQ80_09040 SM00487 DEAD-like helicases superfamily AOQ80_09040 SM00490 helicase superfamily c-terminal domain AOQ80_09105 SM00646 AOQ80_09105 AOQ80_09110 SM00047 Lysozyme subfamily 2 AOQ80_09285 SM00854 Bacterial capsule synthesis protein PGA_cap AOQ80_09315 SM00850 LytTr DNA-binding domain AOQ80_09370 SM00729 Elongator protein 3, MiaB family, Radical SAM AOQ80_09380 SM00448 cheY-homologous receiver domain AOQ80_09380 SM00862 Transcriptional regulatory protein, C terminal AOQ80_09400 SM00450 Rhodanese Homology Domain AOQ80_09450 SM01133 AOQ80_09450 AOQ80_09460 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AOQ80_09495 SM01011 Aminopeptidase P, N-terminal domain AOQ80_09505 SM00287 Bacterial SH3 domain homologues AOQ80_09515 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AOQ80_09515 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AOQ80_09515 SM00493 AOQ80_09515 AOQ80_09610 SM00833 Cobalamin synthesis protein cobW C-terminal domain AOQ80_09645 SM00382 ATPases associated with a variety of cellular activities AOQ80_09650 SM00382 ATPases associated with a variety of cellular activities AOQ80_09685 SM00347 helix_turn_helix multiple antibiotic resistance protein AOQ80_09705 SM00382 ATPases associated with a variety of cellular activities AOQ80_09710 SM00382 ATPases associated with a variety of cellular activities AOQ80_09745 SM00287 Bacterial SH3 domain homologues AOQ80_09760 SM00382 ATPases associated with a variety of cellular activities AOQ80_09765 SM00448 cheY-homologous receiver domain AOQ80_09765 SM00862 Transcriptional regulatory protein, C terminal AOQ80_09770 SM00387 Histidine kinase-like ATPases AOQ80_09770 SM00388 His Kinase A (phosphoacceptor) domain AOQ80_09850 SM00448 cheY-homologous receiver domain AOQ80_09850 SM00862 Transcriptional regulatory protein, C terminal AOQ80_09855 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ80_09855 SM00387 Histidine kinase-like ATPases AOQ80_09855 SM00388 His Kinase A (phosphoacceptor) domain AOQ80_09945 SM00460 Transglutaminase/protease-like homologues AOQ80_09970 SM00966 SpoVT / AbrB like domain AOQ80_09980 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOQ80_10015 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOQ80_10015 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ80_10080 SM00833 Cobalamin synthesis protein cobW C-terminal domain AOQ80_10190 SM00855 Phosphoglycerate mutase family AOQ80_10240 SM00155 Phospholipase D. Active site motifs. AOQ80_10265 SM01091 Transporter associated domain AOQ80_10340 SM00244 prohibitin homologues AOQ80_10345 SM00855 Phosphoglycerate mutase family AOQ80_10360 SM01005 Alanine racemase, C-terminal domain AOQ80_10390 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOQ80_10505 SM00487 DEAD-like helicases superfamily AOQ80_10505 SM00490 helicase superfamily c-terminal domain AOQ80_10525 SM00829 Enoylreductase AOQ80_10545 SM00849 Metallo-beta-lactamase superfamily AOQ80_10560 SM00460 Transglutaminase/protease-like homologues AOQ80_10585 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AOQ80_10605 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOQ80_10610 SM00382 ATPases associated with a variety of cellular activities AOQ80_10620 SM00100 Cyclic nucleotide-monophosphate binding domain AOQ80_10620 SM00419 helix_turn_helix, cAMP Regulatory protein AOQ80_10625 SM00729 Elongator protein 3, MiaB family, Radical SAM AOQ80_10635 SM00852 Probable molybdopterin binding domain AOQ80_10700 SM00894 Excalibur calcium-binding domain AOQ80_10755 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOQ80_10760 SM00382 ATPases associated with a variety of cellular activities AOQ80_10795 SM00567 E-Z type HEAT repeats AOQ80_10795 SM00932 Scaffold protein Nfu/NifU N terminal AOQ80_10815 SM00836 DALR anticodon binding domain AOQ80_10815 SM01016 Arginyl tRNA synthetase N terminal dom AOQ80_10865 SM00327 von Willebrand factor (vWF) type A domain AOQ80_10880 SM00382 ATPases associated with a variety of cellular activities AOQ80_10925 SM00857 Resolvase, N terminal domain AOQ80_10985 SM00448 cheY-homologous receiver domain AOQ80_10985 SM00862 Transcriptional regulatory protein, C terminal AOQ80_10990 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ80_10990 SM00387 Histidine kinase-like ATPases AOQ80_10990 SM00388 His Kinase A (phosphoacceptor) domain AOQ80_11065 SM00382 ATPases associated with a variety of cellular activities AOQ80_11125 SM00563 Phosphate acyltransferases AOQ80_11235 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AOQ80_11240 SM00421 helix_turn_helix, Lux Regulon AOQ80_11240 SM00448 cheY-homologous receiver domain AOQ80_11255 SM00829 Enoylreductase AOQ80_11320 SM00382 ATPases associated with a variety of cellular activities AOQ80_11360 SM01091 Transporter associated domain AOQ80_11375 SM00387 Histidine kinase-like ATPases AOQ80_11375 SM00388 His Kinase A (phosphoacceptor) domain AOQ80_11390 SM00882 Coenzyme A transferase AOQ80_11395 SM00882 Coenzyme A transferase AOQ80_11410 SM00382 ATPases associated with a variety of cellular activities AOQ80_11450 SM00219 Tyrosine kinase, catalytic domain AOQ80_11460 SM00014 Acid phosphatase homologues AOQ80_11480 SM00860 SMI1 / KNR4 family AOQ80_11505 SM00530 Helix-turn-helix XRE-family like proteins AOQ80_11565 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. AOQ80_11715 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOQ80_11755 SM00823 Phosphopantetheine attachment site AOQ80_11755 SM00824 Thioesterase AOQ80_11760 SM00923 MbtH-like protein AOQ80_11780 SM00411 bacterial (prokaryotic) histone like domain AOQ80_11825 SM00363 S4 RNA-binding domain AOQ80_11830 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AOQ80_11885 SM00849 Metallo-beta-lactamase superfamily AOQ80_11915 SM00849 Metallo-beta-lactamase superfamily AOQ80_11935 SM01059 Chloramphenicol acetyltransferase AOQ80_11960 SM00530 Helix-turn-helix XRE-family like proteins AOQ80_12000 SM00357 Cold shock protein domain AOQ80_12070 SM00859 Semialdehyde dehydrogenase, NAD binding domain AOQ80_12105 SM00382 ATPases associated with a variety of cellular activities AOQ80_12110 SM00382 ATPases associated with a variety of cellular activities AOQ80_12120 SM00646 AOQ80_12120 AOQ80_12130 SM00530 Helix-turn-helix XRE-family like proteins AOQ80_12145 SM00835 Cupin AOQ80_12215 SM01207 AOQ80_12215 AOQ80_12240 SM00849 Metallo-beta-lactamase superfamily AOQ80_12255 SM00487 DEAD-like helicases superfamily AOQ80_12255 SM00490 helicase superfamily c-terminal domain AOQ80_12285 SM00382 ATPases associated with a variety of cellular activities AOQ80_12310 SM00347 helix_turn_helix multiple antibiotic resistance protein AOQ80_12315 SM00855 Phosphoglycerate mutase family AOQ80_12390 SM00014 Acid phosphatase homologues AOQ80_12395 SM00354 helix_turn _helix lactose operon repressor AOQ80_12475 SM00530 Helix-turn-helix XRE-family like proteins AOQ80_12500 SM00646 AOQ80_12500 AOQ80_12515 SM00382 ATPases associated with a variety of cellular activities AOQ80_12525 SM00052 Putative diguanylate phosphodiesterase AOQ80_12525 SM00091 PAS domain AOQ80_12525 SM00267 diguanylate cyclase AOQ80_12535 SM00860 SMI1 / KNR4 family AOQ80_12545 SM00450 Rhodanese Homology Domain AOQ80_12545 SM00849 Metallo-beta-lactamase superfamily AOQ80_12560 SM00382 ATPases associated with a variety of cellular activities AOQ80_12590 SM00878 Biotin carboxylase C-terminal domain AOQ80_12655 SM00387 Histidine kinase-like ATPases AOQ80_12655 SM00388 His Kinase A (phosphoacceptor) domain AOQ80_12660 SM00448 cheY-homologous receiver domain AOQ80_12660 SM00862 Transcriptional regulatory protein, C terminal AOQ80_12715 SM00382 ATPases associated with a variety of cellular activities AOQ80_12735 SM00422 helix_turn_helix, mercury resistance AOQ80_12735 SM00871 Bacterial transcription activator, effector binding domain AOQ80_12765 SM00342 helix_turn_helix, arabinose operon control protein AOQ80_12780 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOQ80_12840 SM00448 cheY-homologous receiver domain AOQ80_12840 SM00862 Transcriptional regulatory protein, C terminal AOQ80_12870 SM00382 ATPases associated with a variety of cellular activities AOQ80_12900 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOQ80_12905 SM01209 AOQ80_12905 AOQ80_13030 SM00091 PAS domain AOQ80_13030 SM00387 Histidine kinase-like ATPases AOQ80_13030 SM00388 His Kinase A (phosphoacceptor) domain AOQ80_13055 SM00382 ATPases associated with a variety of cellular activities AOQ80_13065 SM00387 Histidine kinase-like ATPases AOQ80_13065 SM00388 His Kinase A (phosphoacceptor) domain AOQ80_13080 SM00829 Enoylreductase AOQ80_13085 SM00740 AOQ80_13085 AOQ80_13155 SM00422 helix_turn_helix, mercury resistance AOQ80_13250 SM00480 DNA polymerase III beta subunit AOQ80_13360 SM00465 GIY-YIG type nucleases (URI domain) AOQ80_13460 SM00642 Alpha-amylase domain AOQ80_13480 SM00871 Bacterial transcription activator, effector binding domain AOQ80_13500 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOQ80_13615 SM00382 ATPases associated with a variety of cellular activities AOQ80_13635 SM00420 helix_turn_helix, Deoxyribose operon repressor AOQ80_13635 SM01134 AOQ80_13635 AOQ80_13680 SM00861 Transketolase, pyrimidine binding domain AOQ80_13740 SM00116 Domain in cystathionine beta-synthase and other proteins. AOQ80_13740 SM00382 ATPases associated with a variety of cellular activities AOQ80_13775 SM00060 Fibronectin type 3 domain AOQ80_13775 SM00495 Chitin-binding domain type 3 AOQ80_13820 SM00849 Metallo-beta-lactamase superfamily AOQ80_13890 SM00341 Helicase and RNase D C-terminal AOQ80_13890 SM00487 DEAD-like helicases superfamily AOQ80_13890 SM00490 helicase superfamily c-terminal domain AOQ80_13890 SM00956 AOQ80_13890 AOQ80_13940 SM01131 AOQ80_13940 AOQ80_13970 SM01130 AOQ80_13970 AOQ80_13990 SM00091 PAS domain AOQ80_13990 SM00382 ATPases associated with a variety of cellular activities AOQ80_14060 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AOQ80_14100 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AOQ80_14105 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ80_14105 SM00387 Histidine kinase-like ATPases AOQ80_14105 SM00388 His Kinase A (phosphoacceptor) domain AOQ80_14110 SM00448 cheY-homologous receiver domain AOQ80_14110 SM00862 Transcriptional regulatory protein, C terminal AOQ80_14300 SM00382 ATPases associated with a variety of cellular activities AOQ80_14375 SM00062 Bacterial periplasmic substrate-binding proteins AOQ80_14380 SM00382 ATPases associated with a variety of cellular activities AOQ80_14410 SM00028 Tetratricopeptide repeats AOQ80_14500 SM00382 ATPases associated with a variety of cellular activities AOQ80_14555 SM00830 Chorismate mutase type II AOQ80_14590 SM00287 Bacterial SH3 domain homologues AOQ80_14640 SM00382 ATPases associated with a variety of cellular activities AOQ80_14660 SM01133 AOQ80_14660 AOQ80_14690 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOQ80_14710 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AOQ80_14725 SM00346 helix_turn_helix isocitrate lyase regulation AOQ80_14745 SM00098 Alkaline phosphatase homologues AOQ80_14755 SM00530 Helix-turn-helix XRE-family like proteins AOQ80_14780 SM00850 LytTr DNA-binding domain AOQ80_14880 SM01060 AOQ80_14880 AOQ80_14930 SM00347 helix_turn_helix multiple antibiotic resistance protein AOQ80_14935 SM00889 Elongation factor G, domain IV AOQ80_14960 SM00382 ATPases associated with a variety of cellular activities AOQ80_14965 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOQ80_14975 SM00382 ATPases associated with a variety of cellular activities AOQ80_15000 SM00342 helix_turn_helix, arabinose operon control protein AOQ80_15000 SM00871 Bacterial transcription activator, effector binding domain AOQ80_15025 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOQ80_15045 SM00387 Histidine kinase-like ATPases AOQ80_15045 SM00388 His Kinase A (phosphoacceptor) domain AOQ80_15050 SM00448 cheY-homologous receiver domain AOQ80_15050 SM00862 Transcriptional regulatory protein, C terminal AOQ80_15195 SM00796 Allophanate hydrolase subunit 1 AOQ80_15200 SM00346 helix_turn_helix isocitrate lyase regulation AOQ80_15220 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOQ80_15285 SM00849 Metallo-beta-lactamase superfamily AOQ80_15365 SM00870 AOQ80_15365 AOQ80_15370 SM00530 Helix-turn-helix XRE-family like proteins AOQ80_15405 SM00919 Malic enzyme, NAD binding domain AOQ80_15405 SM01274 AOQ80_15405 AOQ80_15435 SM00448 cheY-homologous receiver domain AOQ80_15480 SM01060 AOQ80_15480 AOQ80_15610 SM00382 ATPases associated with a variety of cellular activities AOQ80_15635 SM00226 Low molecular weight phosphatase family AOQ80_15650 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOQ80_15660 SM00028 Tetratricopeptide repeats AOQ80_15680 SM00344 helix_turn_helix ASNC type AOQ80_15715 SM00342 helix_turn_helix, arabinose operon control protein AOQ80_15750 SM00347 helix_turn_helix multiple antibiotic resistance protein AOQ80_15790 SM00448 cheY-homologous receiver domain AOQ80_15790 SM00862 Transcriptional regulatory protein, C terminal AOQ80_15795 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ80_15795 SM00387 Histidine kinase-like ATPases AOQ80_15795 SM00388 His Kinase A (phosphoacceptor) domain AOQ80_15850 SM00530 Helix-turn-helix XRE-family like proteins AOQ80_15900 SM00382 ATPases associated with a variety of cellular activities AOQ80_15910 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOQ80_15925 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ80_15925 SM00387 Histidine kinase-like ATPases AOQ80_15925 SM00388 His Kinase A (phosphoacceptor) domain AOQ80_15930 SM00448 cheY-homologous receiver domain AOQ80_15930 SM00862 Transcriptional regulatory protein, C terminal AOQ80_15940 SM00347 helix_turn_helix multiple antibiotic resistance protein AOQ80_16040 SM00354 helix_turn _helix lactose operon repressor AOQ80_16045 SM00028 Tetratricopeptide repeats AOQ80_16080 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOQ80_16080 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ80_16080 SM00319 Homologues of the ligand binding domain of Tar AOQ80_16100 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AOQ80_16125 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOQ80_16170 SM00344 helix_turn_helix ASNC type AOQ80_16235 SM00342 helix_turn_helix, arabinose operon control protein AOQ80_16250 SM00287 Bacterial SH3 domain homologues AOQ80_16300 SM00347 helix_turn_helix multiple antibiotic resistance protein AOQ80_16325 SM00382 ATPases associated with a variety of cellular activities AOQ80_16335 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOQ80_16405 SM00382 ATPases associated with a variety of cellular activities AOQ80_16450 SM00530 Helix-turn-helix XRE-family like proteins AOQ80_16455 SM01207 AOQ80_16455 AOQ80_16515 SM00382 ATPases associated with a variety of cellular activities AOQ80_16530 SM00530 Helix-turn-helix XRE-family like proteins AOQ80_16590 SM01266 AOQ80_16590 AOQ80_16605 SM00382 ATPases associated with a variety of cellular activities AOQ80_16655 SM00028 Tetratricopeptide repeats AOQ80_16680 SM01091 Transporter associated domain AOQ80_16685 SM00422 helix_turn_helix, mercury resistance AOQ80_16725 SM01350 AOQ80_16725 AOQ80_16730 SM00861 Transketolase, pyrimidine binding domain AOQ80_16745 SM00829 Enoylreductase AOQ80_16760 SM00829 Enoylreductase AOQ80_16780 SM01276 AOQ80_16780 AOQ80_16825 SM00914 AOQ80_16825 AOQ80_16860 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOQ80_16860 SM00866 AOQ80_16860 AOQ80_16895 SM00849 Metallo-beta-lactamase superfamily AOQ80_16960 SM00248 ankyrin repeats AOQ80_16965 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOQ80_17005 SM00871 Bacterial transcription activator, effector binding domain AOQ80_17025 SM00382 ATPases associated with a variety of cellular activities AOQ80_17050 SM00849 Metallo-beta-lactamase superfamily AOQ80_17055 SM00641 Glycosyl hydrolases family 25 AOQ80_17120 SM00849 Metallo-beta-lactamase superfamily AOQ80_17255 SM00829 Enoylreductase AOQ80_17260 SM00855 Phosphoglycerate mutase family AOQ80_17270 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AOQ80_17270 SM00534 ATPase domain of DNA mismatch repair MUTS family AOQ80_17280 SM00642 Alpha-amylase domain AOQ80_17350 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOQ80_17355 SM00829 Enoylreductase AOQ80_17440 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AOQ80_17485 SM00479 AOQ80_17485 AOQ80_17490 SM00357 Cold shock protein domain AOQ80_17515 SM01022 AOQ80_17515 AOQ80_17625 SM00852 Probable molybdopterin binding domain AOQ80_17640 SM00729 Elongator protein 3, MiaB family, Radical SAM AOQ80_17660 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AOQ80_17660 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AOQ80_17770 SM00382 ATPases associated with a variety of cellular activities AOQ80_17785 SM00434 DNA Topoisomerase IV AOQ80_17790 SM00387 Histidine kinase-like ATPases AOQ80_17790 SM00433 TopoisomeraseII AOQ80_17800 SM00881 CoA binding domain AOQ80_17805 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AOQ80_17810 SM00448 cheY-homologous receiver domain AOQ80_17810 SM00862 Transcriptional regulatory protein, C terminal AOQ80_17825 SM01207 AOQ80_17825 AOQ80_17840 SM00257 Lysin motif AOQ80_17840 SM00636 AOQ80_17840 AOQ80_17860 SM00479 AOQ80_17860 AOQ80_17875 SM00382 ATPases associated with a variety of cellular activities AOQ80_17920 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AOQ80_17985 SM00644 AOQ80_17985 AOQ80_17985 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. AOQ80_17990 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AOQ80_18005 SM00091 PAS domain AOQ80_18005 SM00387 Histidine kinase-like ATPases AOQ80_18005 SM00388 His Kinase A (phosphoacceptor) domain AOQ80_18035 SM01058 CarD-like/TRCF domain AOQ80_18170 SM00644 AOQ80_18170 AOQ80_18185 SM00382 ATPases associated with a variety of cellular activities AOQ80_18190 SM00382 ATPases associated with a variety of cellular activities AOQ80_18205 SM00861 Transketolase, pyrimidine binding domain AOQ80_18230 SM00382 ATPases associated with a variety of cellular activities AOQ80_18235 SM00062 Bacterial periplasmic substrate-binding proteins AOQ80_18255 SM00857 Resolvase, N terminal domain AOQ80_18280 SM00028 Tetratricopeptide repeats AOQ80_18310 SM00287 Bacterial SH3 domain homologues AOQ80_18310 SM00644 AOQ80_18310 AOQ80_18470 SM00530 Helix-turn-helix XRE-family like proteins AOQ80_18550 SM00382 ATPases associated with a variety of cellular activities AOQ80_18600 SM00530 Helix-turn-helix XRE-family like proteins AOQ80_18605 SM00530 Helix-turn-helix XRE-family like proteins AOQ80_18630 SM01230 AOQ80_18630 AOQ80_18635 SM00422 helix_turn_helix, mercury resistance AOQ80_18655 SM00382 ATPases associated with a variety of cellular activities AOQ80_18685 SM00287 Bacterial SH3 domain homologues AOQ80_18700 SM00420 helix_turn_helix, Deoxyribose operon repressor AOQ80_18700 SM01134 AOQ80_18700 AOQ80_18730 SM00636 AOQ80_18730 AOQ80_18745 SM00411 bacterial (prokaryotic) histone like domain AOQ80_18775 SM00382 ATPases associated with a variety of cellular activities AOQ80_18805 SM00342 helix_turn_helix, arabinose operon control protein AOQ80_18815 SM00478 endonuclease III AOQ80_18850 SM00052 Putative diguanylate phosphodiesterase AOQ80_18850 SM00091 PAS domain AOQ80_18850 SM00267 diguanylate cyclase AOQ80_18880 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOQ80_18900 SM00148 Phospholipase C, catalytic domain (part); domain X AOQ80_18910 SM00257 Lysin motif AOQ80_18940 SM00387 Histidine kinase-like ATPases AOQ80_18940 SM00388 His Kinase A (phosphoacceptor) domain AOQ80_18945 SM00448 cheY-homologous receiver domain AOQ80_18945 SM00862 Transcriptional regulatory protein, C terminal AOQ80_18960 SM00382 ATPases associated with a variety of cellular activities AOQ80_18965 SM00853 MutL C terminal dimerisation domain AOQ80_18965 SM01340 AOQ80_18965 AOQ80_18970 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AOQ80_18970 SM00534 ATPase domain of DNA mismatch repair MUTS family AOQ80_18985 SM00729 Elongator protein 3, MiaB family, Radical SAM AOQ80_19015 SM00322 K homology RNA-binding domain AOQ80_19015 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOQ80_19030 SM00852 Probable molybdopterin binding domain AOQ80_19085 SM00382 ATPases associated with a variety of cellular activities AOQ80_19095 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOQ80_19095 SM00866 AOQ80_19095 AOQ80_19100 SM00382 ATPases associated with a variety of cellular activities AOQ80_19100 SM00843 AOQ80_19100 AOQ80_19115 SM00849 Metallo-beta-lactamase superfamily AOQ80_19125 SM01130 AOQ80_19125 AOQ80_19135 SM00859 Semialdehyde dehydrogenase, NAD binding domain AOQ80_19165 SM00316 Ribosomal protein S1-like RNA-binding domain AOQ80_19165 SM00322 K homology RNA-binding domain AOQ80_19170 SM01387 AOQ80_19170 AOQ80_19175 SM00904 Riboflavin kinase AOQ80_19210 SM00316 Ribosomal protein S1-like RNA-binding domain AOQ80_19210 SM00322 K homology RNA-binding domain AOQ80_19220 SM00479 AOQ80_19220 AOQ80_19220 SM00481 DNA polymerase alpha chain like domain AOQ80_19230 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AOQ80_19275 SM00382 ATPases associated with a variety of cellular activities AOQ80_19275 SM01086 C-terminal, D2-small domain, of ClpB protein AOQ80_19295 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AOQ80_19295 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AOQ80_19295 SM00493 AOQ80_19295 AOQ80_19305 SM00881 CoA binding domain AOQ80_19355 SM00382 ATPases associated with a variety of cellular activities AOQ80_19355 SM00962 SRP54-type protein, GTPase domain AOQ80_19355 SM00963 SRP54-type protein, helical bundle domain AOQ80_19365 SM00382 ATPases associated with a variety of cellular activities AOQ80_19365 SM00962 SRP54-type protein, GTPase domain AOQ80_19365 SM00963 SRP54-type protein, helical bundle domain AOQ80_19370 SM00968 SMC proteins Flexible Hinge Domain AOQ80_19375 SM00358 Double-stranded RNA binding motif AOQ80_19375 SM00535 Ribonuclease III family AOQ80_19385 SM00822 AOQ80_19385 AOQ80_19390 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AOQ80_19405 SM00487 DEAD-like helicases superfamily AOQ80_19405 SM00490 helicase superfamily c-terminal domain AOQ80_19410 SM01120 AOQ80_19410 AOQ80_19410 SM01121 AOQ80_19410 AOQ80_19430 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain AOQ80_19445 SM00220 Serine/Threonine protein kinases, catalytic domain AOQ80_19445 SM00740 AOQ80_19445 AOQ80_19450 SM00331 Sigma factor PP2C-like phosphatases AOQ80_19450 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AOQ80_19475 SM00487 DEAD-like helicases superfamily AOQ80_19475 SM00490 helicase superfamily c-terminal domain AOQ80_19485 SM01409 AOQ80_19485 AOQ80_19490 SM00072 Guanylate kinase homologues. AOQ80_19505 SM00831 Cation transporter/ATPase, N-terminus AOQ80_19550 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AOQ80_19565 SM00851 MGS-like domain AOQ80_19565 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AOQ80_19565 SM01209 AOQ80_19565 AOQ80_19570 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AOQ80_19595 SM00363 S4 RNA-binding domain AOQ80_19620 SM00363 S4 RNA-binding domain AOQ80_19665 SM00864 Tubulin/FtsZ family, GTPase domain AOQ80_19665 SM00865 Tubulin/FtsZ family, C-terminal domain AOQ80_19670 SM00842 Cell division protein FtsA AOQ80_19710 SM00740 AOQ80_19710 AOQ80_19715 SM00740 AOQ80_19715 AOQ80_19745 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains AOQ80_19785 SM00530 Helix-turn-helix XRE-family like proteins AOQ80_19800 SM00644 AOQ80_19800 AOQ80_19910 SM00507 HNH nucleases AOQ80_19955 SM00530 Helix-turn-helix XRE-family like proteins AOQ80_20025 SM00382 ATPases associated with a variety of cellular activities AOQ80_20050 SM00530 Helix-turn-helix XRE-family like proteins AOQ80_20055 SM00530 Helix-turn-helix XRE-family like proteins AOQ80_20065 SM00530 Helix-turn-helix XRE-family like proteins AOQ80_20090 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AOQ80_20130 SM00855 Phosphoglycerate mutase family AOQ80_20195 SM00878 Biotin carboxylase C-terminal domain AOQ80_20215 SM00670 Large family of predicted nucleotide-binding domains AOQ80_20240 SM00838 Elongation factor G C-terminus AOQ80_20320 SM00861 Transketolase, pyrimidine binding domain AOQ80_20350 SM00849 Metallo-beta-lactamase superfamily AOQ80_20415 SM00052 Putative diguanylate phosphodiesterase AOQ80_20510 SM00387 Histidine kinase-like ATPases AOQ80_20510 SM00388 His Kinase A (phosphoacceptor) domain AOQ80_20525 SM00354 helix_turn _helix lactose operon repressor AOQ80_20545 SM00642 Alpha-amylase domain AOQ80_20550 SM00642 Alpha-amylase domain AOQ80_20555 SM00382 ATPases associated with a variety of cellular activities AOQ80_20590 SM00382 ATPases associated with a variety of cellular activities AOQ80_20680 SM01007 Class II Aldolase and Adducin N-terminal domain AOQ80_20705 SM00267 diguanylate cyclase AOQ80_20740 SM01061 CAT RNA binding domain AOQ80_20750 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOQ80_20750 SM00866 AOQ80_20750 AOQ80_20765 SM00849 Metallo-beta-lactamase superfamily AOQ80_20870 SM00387 Histidine kinase-like ATPases AOQ80_20880 SM00936 Penicillin-binding protein 5, C-terminal domain AOQ80_20885 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOQ80_20890 SM00382 ATPases associated with a variety of cellular activities AOQ80_20910 SM00347 helix_turn_helix multiple antibiotic resistance protein AOQ80_20930 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AOQ80_21025 SM00354 helix_turn _helix lactose operon repressor AOQ80_21045 SM00704 CDGSH-type zinc finger. Function unknown. AOQ80_21075 SM00729 Elongator protein 3, MiaB family, Radical SAM AOQ80_21075 SM00876 Biotin and Thiamin Synthesis associated domain AOQ80_21125 SM00347 helix_turn_helix multiple antibiotic resistance protein AOQ80_21160 SM00859 Semialdehyde dehydrogenase, NAD binding domain AOQ80_21205 SM00849 Metallo-beta-lactamase superfamily AOQ80_21255 SM00382 ATPases associated with a variety of cellular activities AOQ80_21265 SM00062 Bacterial periplasmic substrate-binding proteins AOQ80_21265 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AOQ80_21300 SM00861 Transketolase, pyrimidine binding domain AOQ80_21320 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AOQ80_21335 SM00091 PAS domain AOQ80_21335 SM00382 ATPases associated with a variety of cellular activities AOQ80_21360 SM00448 cheY-homologous receiver domain AOQ80_21370 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AOQ80_21385 SM00363 S4 RNA-binding domain AOQ80_21390 SM00861 Transketolase, pyrimidine binding domain AOQ80_21425 SM00878 Biotin carboxylase C-terminal domain AOQ80_21475 SM00382 ATPases associated with a variety of cellular activities AOQ80_21495 SM00841 Elongation factor P, C-terminal AOQ80_21495 SM01185 AOQ80_21495 AOQ80_21530 SM00529 Helix-turn-helix diphteria tox regulatory element AOQ80_21550 SM00450 Rhodanese Homology Domain AOQ80_21555 SM00354 helix_turn _helix lactose operon repressor AOQ80_21610 SM00382 ATPases associated with a variety of cellular activities AOQ80_21615 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOQ80_21645 SM00487 DEAD-like helicases superfamily AOQ80_21645 SM00490 helicase superfamily c-terminal domain AOQ80_21680 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AOQ80_21715 SM00382 ATPases associated with a variety of cellular activities AOQ80_21770 SM01018 B12 binding domain AOQ80_21805 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOQ80_21815 SM00849 Metallo-beta-lactamase superfamily AOQ80_21855 SM00382 ATPases associated with a variety of cellular activities AOQ80_21920 SM00382 ATPases associated with a variety of cellular activities AOQ80_21935 SM00518 AP endonuclease family 2 AOQ80_21940 SM00487 DEAD-like helicases superfamily AOQ80_21940 SM00490 helicase superfamily c-terminal domain AOQ80_21975 SM00400 zinc finger AOQ80_21975 SM00493 AOQ80_21975 AOQ80_21975 SM00766 DNA primase DnaG DnaB-binding AOQ80_21995 SM00116 Domain in cystathionine beta-synthase and other proteins. AOQ80_22030 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOQ80_22065 SM00729 Elongator protein 3, MiaB family, Radical SAM AOQ80_22080 SM00271 DnaJ molecular chaperone homology domain AOQ80_22100 SM00729 Elongator protein 3, MiaB family, Radical SAM AOQ80_22110 SM00838 Elongation factor G C-terminus AOQ80_22140 SM00849 Metallo-beta-lactamase superfamily AOQ80_22150 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AOQ80_22170 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOQ80_22180 SM01103 AOQ80_22180 AOQ80_22235 SM00954 Region found in RelA / SpoT proteins AOQ80_22245 SM00098 Alkaline phosphatase homologues AOQ80_22270 SM00855 Phosphoglycerate mutase family AOQ80_22320 SM00530 Helix-turn-helix XRE-family like proteins AOQ80_22345 SM00382 ATPases associated with a variety of cellular activities AOQ80_22440 SM00732 Likely ribonuclease with RNase H fold. AOQ80_22450 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AOQ80_22485 SM00028 Tetratricopeptide repeats AOQ80_22505 SM00382 ATPases associated with a variety of cellular activities AOQ80_22540 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOQ80_22540 SM00954 Region found in RelA / SpoT proteins AOQ80_22585 SM01323 AOQ80_22585 AOQ80_22605 SM00382 ATPases associated with a variety of cellular activities AOQ80_22610 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AOQ80_22635 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOQ80_22650 SM00257 Lysin motif AOQ80_22700 SM00382 ATPases associated with a variety of cellular activities AOQ80_22705 SM00387 Histidine kinase-like ATPases AOQ80_22715 SM00448 cheY-homologous receiver domain AOQ80_22715 SM00862 Transcriptional regulatory protein, C terminal AOQ80_22725 SM01317 AOQ80_22725 AOQ80_22815 SM00257 Lysin motif AOQ80_22825 SM01004 Delta-aminolevulinic acid dehydratase AOQ80_22850 SM00347 helix_turn_helix multiple antibiotic resistance protein AOQ80_22865 SM00382 ATPases associated with a variety of cellular activities AOQ80_22865 SM00464 Found in ATP-dependent protease La (LON) AOQ80_22870 SM00382 ATPases associated with a variety of cellular activities AOQ80_22875 SM00382 ATPases associated with a variety of cellular activities AOQ80_22875 SM00994 ClpX C4-type zinc finger AOQ80_22875 SM01086 C-terminal, D2-small domain, of ClpB protein AOQ80_22935 SM00909 Sporulation and spore germination AOQ80_22970 SM00421 helix_turn_helix, Lux Regulon AOQ80_23010 SM00382 ATPases associated with a variety of cellular activities AOQ80_23015 SM00382 ATPases associated with a variety of cellular activities AOQ80_23025 SM00342 helix_turn_helix, arabinose operon control protein AOQ80_23025 SM00448 cheY-homologous receiver domain AOQ80_23045 SM00530 Helix-turn-helix XRE-family like proteins AOQ80_23070 SM00382 ATPases associated with a variety of cellular activities AOQ80_23120 SM00465 GIY-YIG type nucleases (URI domain) AOQ80_23130 SM00893 Electron transfer flavoprotein domain AOQ80_23135 SM00893 Electron transfer flavoprotein domain AOQ80_23200 SM00382 ATPases associated with a variety of cellular activities AOQ80_23205 SM00387 Histidine kinase-like ATPases AOQ80_23205 SM00388 His Kinase A (phosphoacceptor) domain AOQ80_23210 SM00448 cheY-homologous receiver domain AOQ80_23210 SM00862 Transcriptional regulatory protein, C terminal AOQ80_23225 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AOQ80_23245 SM00382 ATPases associated with a variety of cellular activities AOQ80_23260 SM00725 NEAr Transporter domain AOQ80_23265 SM00725 NEAr Transporter domain AOQ80_23270 SM00725 NEAr Transporter domain AOQ80_23280 SM00363 S4 RNA-binding domain AOQ80_23290 SM00463 Small MutS-related domain AOQ80_23290 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AOQ80_23290 SM00534 ATPase domain of DNA mismatch repair MUTS family AOQ80_23295 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AOQ80_23295 SM00481 DNA polymerase alpha chain like domain AOQ80_23295 SM00483 DNA polymerase X family AOQ80_23335 SM00873 B3/4 domain AOQ80_23335 SM00874 tRNA synthetase B5 domain AOQ80_23335 SM00896 Ferredoxin-fold anticodon binding domain AOQ80_23345 SM00967 RNA 2'-O ribose methyltransferase substrate binding AOQ80_23420 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AOQ80_23430 SM00382 ATPases associated with a variety of cellular activities AOQ80_23450 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AOQ80_23465 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AOQ80_23465 SM01232 AOQ80_23465 AOQ80_23470 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AOQ80_23470 SM00474 3'-5' exonuclease AOQ80_23470 SM00475 5'-3' exonuclease AOQ80_23470 SM00482 DNA polymerase A domain AOQ80_23475 SM00091 PAS domain AOQ80_23475 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ80_23475 SM00387 Histidine kinase-like ATPases AOQ80_23475 SM00388 His Kinase A (phosphoacceptor) domain AOQ80_23480 SM00448 cheY-homologous receiver domain AOQ80_23480 SM00862 Transcriptional regulatory protein, C terminal AOQ80_23500 SM01329 AOQ80_23500 AOQ80_23550 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOQ80_23555 SM00919 Malic enzyme, NAD binding domain AOQ80_23555 SM01274 AOQ80_23555 AOQ80_23560 SM00481 DNA polymerase alpha chain like domain AOQ80_23595 SM00116 Domain in cystathionine beta-synthase and other proteins. AOQ80_23605 SM00849 Metallo-beta-lactamase superfamily AOQ80_23660 SM00530 Helix-turn-helix XRE-family like proteins AOQ80_23670 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AOQ80_23670 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AOQ80_23790 SM00981 AOQ80_23790 AOQ80_23830 SM00363 S4 RNA-binding domain AOQ80_23830 SM01390 AOQ80_23830 AOQ80_23845 SM00363 S4 RNA-binding domain AOQ80_23875 SM00116 Domain in cystathionine beta-synthase and other proteins. AOQ80_23890 SM00448 cheY-homologous receiver domain AOQ80_23890 SM00862 Transcriptional regulatory protein, C terminal AOQ80_23895 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ80_23895 SM00387 Histidine kinase-like ATPases AOQ80_23895 SM00388 His Kinase A (phosphoacceptor) domain AOQ80_23900 SM00248 ankyrin repeats AOQ80_23935 SM00354 helix_turn _helix lactose operon repressor AOQ80_23995 SM00843 AOQ80_23995 AOQ80_24035 SM00849 Metallo-beta-lactamase superfamily AOQ80_24055 SM00642 Alpha-amylase domain AOQ80_24080 SM00420 helix_turn_helix, Deoxyribose operon repressor AOQ80_24085 SM00363 S4 RNA-binding domain AOQ80_24105 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOQ80_24130 SM01058 CarD-like/TRCF domain AOQ80_24165 SM00852 Probable molybdopterin binding domain AOQ80_24200 SM00450 Rhodanese Homology Domain AOQ80_24280 SM00382 ATPases associated with a variety of cellular activities AOQ80_24300 SM00729 Elongator protein 3, MiaB family, Radical SAM AOQ80_24310 SM00382 ATPases associated with a variety of cellular activities AOQ80_24350 SM00014 Acid phosphatase homologues AOQ80_24365 SM00852 Probable molybdopterin binding domain AOQ80_24425 SM00387 Histidine kinase-like ATPases AOQ80_24430 SM00387 Histidine kinase-like ATPases AOQ80_24430 SM00388 His Kinase A (phosphoacceptor) domain AOQ80_24460 SM00382 ATPases associated with a variety of cellular activities AOQ80_24515 SM01234 AOQ80_24515 AOQ80_24520 SM00947 Carbonic anhydrase AOQ80_24540 SM00894 Excalibur calcium-binding domain AOQ80_24600 SM00899 AOQ80_24600 AOQ80_24610 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ80_24610 SM00387 Histidine kinase-like ATPases AOQ80_24610 SM00388 His Kinase A (phosphoacceptor) domain AOQ80_24615 SM00448 cheY-homologous receiver domain AOQ80_24615 SM00862 Transcriptional regulatory protein, C terminal AOQ80_24645 SM00046 Diacylglycerol kinase catalytic domain (presumed) AOQ80_24695 SM00382 ATPases associated with a variety of cellular activities AOQ80_24700 SM00342 helix_turn_helix, arabinose operon control protein AOQ80_24700 SM00871 Bacterial transcription activator, effector binding domain AOQ80_24705 SM00448 cheY-homologous receiver domain AOQ80_24705 SM00862 Transcriptional regulatory protein, C terminal AOQ80_24710 SM00387 Histidine kinase-like ATPases AOQ80_24735 SM00382 ATPases associated with a variety of cellular activities AOQ80_24755 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOQ80_24755 SM00866 AOQ80_24755 AOQ80_24795 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ80_24795 SM00387 Histidine kinase-like ATPases AOQ80_24795 SM00388 His Kinase A (phosphoacceptor) domain AOQ80_24800 SM00448 cheY-homologous receiver domain AOQ80_24800 SM00862 Transcriptional regulatory protein, C terminal AOQ80_24805 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AOQ80_24845 SM00357 Cold shock protein domain AOQ80_24885 SM00642 Alpha-amylase domain AOQ80_25050 SM00316 Ribosomal protein S1-like RNA-binding domain AOQ80_25060 SM00344 helix_turn_helix ASNC type AOQ80_25095 SM01298 AOQ80_25095 AOQ80_25100 SM00479 AOQ80_25100 AOQ80_25195 SM00871 Bacterial transcription activator, effector binding domain AOQ80_25255 SM00382 ATPases associated with a variety of cellular activities AOQ80_25280 SM00860 SMI1 / KNR4 family AOQ80_25350 SM00420 helix_turn_helix, Deoxyribose operon repressor AOQ80_25390 SM00422 helix_turn_helix, mercury resistance AOQ80_25405 SM00855 Phosphoglycerate mutase family AOQ80_25415 SM00729 Elongator protein 3, MiaB family, Radical SAM AOQ80_25480 SM00382 ATPases associated with a variety of cellular activities AOQ80_25500 SM00382 ATPases associated with a variety of cellular activities AOQ80_25500 SM00930 AOQ80_25500 AOQ80_25520 SM00493 AOQ80_25520 AOQ80_25605 SM00849 Metallo-beta-lactamase superfamily AOQ80_25655 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOQ80_25655 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ80_25725 SM00530 Helix-turn-helix XRE-family like proteins AOQ80_25750 SM00448 cheY-homologous receiver domain AOQ80_25750 SM00862 Transcriptional regulatory protein, C terminal AOQ80_25755 SM00387 Histidine kinase-like ATPases AOQ80_25755 SM00388 His Kinase A (phosphoacceptor) domain AOQ80_25775 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOQ80_25775 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ80_25795 SM00347 helix_turn_helix multiple antibiotic resistance protein AOQ80_25925 SM00363 S4 RNA-binding domain AOQ80_25935 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain AOQ80_25940 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOQ80_25990 SM00382 ATPases associated with a variety of cellular activities AOQ80_26010 SM00448 cheY-homologous receiver domain AOQ80_26010 SM00862 Transcriptional regulatory protein, C terminal AOQ80_26020 SM00316 Ribosomal protein S1-like RNA-binding domain AOQ80_26020 SM00357 Cold shock protein domain AOQ80_26020 SM00955 AOQ80_26020 AOQ80_26130 SM00507 HNH nucleases AOQ80_26165 SM01192 AOQ80_26165 AOQ80_26165 SM01193 AOQ80_26165 AOQ80_26185 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AOQ80_26285 SM00028 Tetratricopeptide repeats AOQ80_26325 SM00487 DEAD-like helicases superfamily AOQ80_26325 SM00490 helicase superfamily c-terminal domain AOQ80_26345 SM00422 helix_turn_helix, mercury resistance AOQ80_26365 SM00530 Helix-turn-helix XRE-family like proteins AOQ80_26380 SM00422 helix_turn_helix, mercury resistance AOQ80_26390 SM00382 ATPases associated with a variety of cellular activities AOQ80_26400 SM00382 ATPases associated with a variety of cellular activities AOQ80_26410 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AOQ80_26410 SM00245 tail specific protease AOQ80_26420 SM00382 ATPases associated with a variety of cellular activities AOQ80_26435 SM00937 AOQ80_26435 AOQ80_26440 SM00957 SecA DEAD-like domain AOQ80_26440 SM00958 SecA preprotein cross-linking domain AOQ80_26450 SM00357 Cold shock protein domain AOQ80_26460 SM00487 DEAD-like helicases superfamily AOQ80_26460 SM00490 helicase superfamily c-terminal domain AOQ80_26500 SM00984 UDP binding domain AOQ80_26515 SM00382 ATPases associated with a variety of cellular activities AOQ80_26520 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. AOQ80_26705 SM00287 Bacterial SH3 domain homologues AOQ80_26735 SM00487 DEAD-like helicases superfamily AOQ80_26735 SM00490 helicase superfamily c-terminal domain AOQ80_26780 SM00382 ATPases associated with a variety of cellular activities AOQ80_26790 SM00530 Helix-turn-helix XRE-family like proteins AOQ80_26815 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ80_26815 SM00387 Histidine kinase-like ATPases AOQ80_26815 SM00388 His Kinase A (phosphoacceptor) domain AOQ80_26820 SM00448 cheY-homologous receiver domain AOQ80_26820 SM00862 Transcriptional regulatory protein, C terminal AOQ80_26845 SM00287 Bacterial SH3 domain homologues AOQ80_26845 SM00382 ATPases associated with a variety of cellular activities AOQ80_26855 SM00984 UDP binding domain AOQ80_26925 SM00382 ATPases associated with a variety of cellular activities AOQ80_26930 SM00850 LytTr DNA-binding domain AOQ80_27015 SM00052 Putative diguanylate phosphodiesterase AOQ80_27015 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AOQ80_27015 SM00091 PAS domain AOQ80_27015 SM00267 diguanylate cyclase AOQ80_27035 SM00382 ATPases associated with a variety of cellular activities AOQ80_27105 SM00226 Low molecular weight phosphatase family AOQ80_27120 SM00903 Flavin reductase like domain AOQ80_27155 SM00937 AOQ80_27155 AOQ80_27170 SM00357 Cold shock protein domain AOQ80_27170 SM00382 ATPases associated with a variety of cellular activities AOQ80_27170 SM00959 Rho termination factor, N-terminal domain AOQ80_27190 SM00448 cheY-homologous receiver domain AOQ80_27240 SM00155 Phospholipase D. Active site motifs. AOQ80_27250 SM00052 Putative diguanylate phosphodiesterase AOQ80_27250 SM00267 diguanylate cyclase AOQ80_27260 SM00530 Helix-turn-helix XRE-family like proteins AOQ80_27265 SM00421 helix_turn_helix, Lux Regulon AOQ80_27265 SM00448 cheY-homologous receiver domain AOQ80_27270 SM00387 Histidine kinase-like ATPases AOQ80_27280 SM00382 ATPases associated with a variety of cellular activities AOQ80_27330 SM00836 DALR anticodon binding domain AOQ80_27330 SM01016 Arginyl tRNA synthetase N terminal dom AOQ80_27375 SM00422 helix_turn_helix, mercury resistance AOQ80_27405 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOQ80_27415 SM00382 ATPases associated with a variety of cellular activities AOQ80_27465 SM00936 Penicillin-binding protein 5, C-terminal domain AOQ80_27510 SM00986 Uracil DNA glycosylase superfamily AOQ80_27510 SM00987 UreE urease accessory protein, C-terminal domain AOQ80_27520 SM00382 ATPases associated with a variety of cellular activities AOQ80_27530 SM00354 helix_turn _helix lactose operon repressor AOQ80_27565 SM00100 Cyclic nucleotide-monophosphate binding domain AOQ80_27575 SM00421 helix_turn_helix, Lux Regulon AOQ80_27575 SM00448 cheY-homologous receiver domain AOQ80_27590 SM00267 diguanylate cyclase AOQ80_27605 SM00448 cheY-homologous receiver domain AOQ80_27605 SM00850 LytTr DNA-binding domain AOQ80_27635 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOQ80_27660 SM00382 ATPases associated with a variety of cellular activities AOQ80_27725 SM00448 cheY-homologous receiver domain AOQ80_27725 SM00850 LytTr DNA-binding domain AOQ80_27730 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AOQ80_27730 SM00387 Histidine kinase-like ATPases AOQ80_27785 SM00487 DEAD-like helicases superfamily AOQ80_27785 SM00490 helicase superfamily c-terminal domain AOQ80_27795 SM01240 AOQ80_27795 AOQ80_27820 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AOQ80_27825 SM00849 Metallo-beta-lactamase superfamily AOQ80_27840 SM00091 PAS domain AOQ80_27840 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ80_27840 SM00387 Histidine kinase-like ATPases AOQ80_27840 SM00388 His Kinase A (phosphoacceptor) domain AOQ80_27845 SM00448 cheY-homologous receiver domain AOQ80_27845 SM00862 Transcriptional regulatory protein, C terminal AOQ80_27870 SM00788 Adenylosuccinate synthetase AOQ80_27885 SM00267 diguanylate cyclase AOQ80_27930 SM00470 ParB-like nuclease domain AOQ80_27940 SM00470 ParB-like nuclease domain AOQ80_27950 SM01228 AOQ80_27950 AOQ80_27960 SM00393 Putative single-stranded nucleic acids-binding domain AOQ80_27960 SM01245 AOQ80_27960