AOQ81_00005 SM00382 ATPases associated with a variety of cellular activities AOQ81_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain AOQ81_00010 SM00480 DNA polymerase III beta subunit AOQ81_00025 SM00387 Histidine kinase-like ATPases AOQ81_00025 SM00433 TopoisomeraseII AOQ81_00030 SM00434 DNA Topoisomerase IV AOQ81_00065 SM00116 Domain in cystathionine beta-synthase and other proteins. AOQ81_00065 SM01240 AOQ81_00065 AOQ81_00070 SM00936 Penicillin-binding protein 5, C-terminal domain AOQ81_00125 SM00382 ATPases associated with a variety of cellular activities AOQ81_00135 SM00493 AOQ81_00135 AOQ81_00220 SM00966 SpoVT / AbrB like domain AOQ81_00235 SM00493 AOQ81_00235 AOQ81_00240 SM00650 Ribosomal RNA adenine dimethylases AOQ81_00285 SM01400 AOQ81_00285 AOQ81_00300 SM00487 DEAD-like helicases superfamily AOQ81_00300 SM00490 helicase superfamily c-terminal domain AOQ81_00300 SM00982 AOQ81_00300 AOQ81_00300 SM01058 CarD-like/TRCF domain AOQ81_00305 SM00966 SpoVT / AbrB like domain AOQ81_00320 SM00363 S4 RNA-binding domain AOQ81_00340 SM00316 Ribosomal protein S1-like RNA-binding domain AOQ81_00355 SM00331 Sigma factor PP2C-like phosphatases AOQ81_00355 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AOQ81_00360 SM00977 TilS substrate C-terminal domain AOQ81_00370 SM00382 ATPases associated with a variety of cellular activities AOQ81_00410 SM00905 Dihydroneopterin aldolase AOQ81_00420 SM00530 Helix-turn-helix XRE-family like proteins AOQ81_00465 SM00382 ATPases associated with a variety of cellular activities AOQ81_00465 SM01086 C-terminal, D2-small domain, of ClpB protein AOQ81_00470 SM00382 ATPases associated with a variety of cellular activities AOQ81_00480 SM00670 Large family of predicted nucleotide-binding domains AOQ81_00505 SM00840 AOQ81_00505 AOQ81_00510 SM00535 Ribonuclease III family AOQ81_00515 SM00967 RNA 2'-O ribose methyltransferase substrate binding AOQ81_00525 SM00421 helix_turn_helix, Lux Regulon AOQ81_00540 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AOQ81_00545 SM00649 Ribosomal protein L11/L12 AOQ81_00575 SM00663 RNA polymerase I subunit A N-terminus AOQ81_00595 SM00838 Elongation factor G C-terminus AOQ81_00595 SM00889 Elongation factor G, domain IV AOQ81_00605 SM01403 AOQ81_00605 AOQ81_00625 SM01382 AOQ81_00625 AOQ81_00625 SM01383 AOQ81_00625 AOQ81_00640 SM00322 K homology RNA-binding domain AOQ81_00660 SM01374 AOQ81_00660 AOQ81_00665 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AOQ81_00725 SM00316 Ribosomal protein S1-like RNA-binding domain AOQ81_00745 SM00662 RNA polymerases D AOQ81_00755 SM00382 ATPases associated with a variety of cellular activities AOQ81_00760 SM00382 ATPases associated with a variety of cellular activities AOQ81_00790 SM00646 AOQ81_00790 AOQ81_00805 SM01251 AOQ81_00805 AOQ81_00925 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOQ81_00925 SM00895 AOQ81_00925 AOQ81_00940 SM01350 AOQ81_00940 AOQ81_00990 SM00382 ATPases associated with a variety of cellular activities AOQ81_00990 SM00930 AOQ81_00990 AOQ81_01000 SM00829 Enoylreductase AOQ81_01050 SM00382 ATPases associated with a variety of cellular activities AOQ81_01055 SM00382 ATPases associated with a variety of cellular activities AOQ81_01070 SM00342 helix_turn_helix, arabinose operon control protein AOQ81_01165 SM00563 Phosphate acyltransferases AOQ81_01175 SM00354 helix_turn _helix lactose operon repressor AOQ81_01230 SM00382 ATPases associated with a variety of cellular activities AOQ81_01260 SM00382 ATPases associated with a variety of cellular activities AOQ81_01265 SM00382 ATPases associated with a variety of cellular activities AOQ81_01325 SM00487 DEAD-like helicases superfamily AOQ81_01325 SM00490 helicase superfamily c-terminal domain AOQ81_01350 SM01005 Alanine racemase, C-terminal domain AOQ81_01365 SM00316 Ribosomal protein S1-like RNA-binding domain AOQ81_01365 SM00732 Likely ribonuclease with RNase H fold. AOQ81_01375 SM00731 SprT homologues. AOQ81_01480 SM00382 ATPases associated with a variety of cellular activities AOQ81_01485 SM00881 CoA binding domain AOQ81_01500 SM00883 Chaperonin 10 Kd subunit AOQ81_01520 SM00448 cheY-homologous receiver domain AOQ81_01520 SM00862 Transcriptional regulatory protein, C terminal AOQ81_01525 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ81_01525 SM00387 Histidine kinase-like ATPases AOQ81_01525 SM00388 His Kinase A (phosphoacceptor) domain AOQ81_01605 SM00382 ATPases associated with a variety of cellular activities AOQ81_01610 SM00387 Histidine kinase-like ATPases AOQ81_01610 SM00388 His Kinase A (phosphoacceptor) domain AOQ81_01615 SM00448 cheY-homologous receiver domain AOQ81_01615 SM00862 Transcriptional regulatory protein, C terminal AOQ81_01635 SM01001 AIR carboxylase AOQ81_01645 SM00998 Adenylosuccinate lyase C-terminus AOQ81_01660 SM01211 AOQ81_01660 AOQ81_01685 SM00798 AICARFT/IMPCHase bienzyme AOQ81_01685 SM00851 MGS-like domain AOQ81_01690 SM01209 AOQ81_01690 AOQ81_01690 SM01210 AOQ81_01690 AOQ81_01700 SM00244 prohibitin homologues AOQ81_01720 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AOQ81_01720 SM00292 breast cancer carboxy-terminal domain AOQ81_01720 SM00532 Ligase N family AOQ81_01750 SM00382 ATPases associated with a variety of cellular activities AOQ81_01750 SM00930 AOQ81_01750 AOQ81_01780 SM00347 helix_turn_helix multiple antibiotic resistance protein AOQ81_01800 SM00845 GatB domain AOQ81_01805 SM00046 Diacylglycerol kinase catalytic domain (presumed) AOQ81_01820 SM00382 ATPases associated with a variety of cellular activities AOQ81_01885 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AOQ81_01930 SM01007 Class II Aldolase and Adducin N-terminal domain AOQ81_02045 SM00062 Bacterial periplasmic substrate-binding proteins AOQ81_02045 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AOQ81_02050 SM00382 ATPases associated with a variety of cellular activities AOQ81_02060 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOQ81_02060 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ81_02065 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOQ81_02065 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ81_02070 SM00642 Alpha-amylase domain AOQ81_02090 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AOQ81_02090 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AOQ81_02090 SM00493 AOQ81_02090 AOQ81_02110 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOQ81_02110 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ81_02130 SM00382 ATPases associated with a variety of cellular activities AOQ81_02135 SM00382 ATPases associated with a variety of cellular activities AOQ81_02140 SM00060 Fibronectin type 3 domain AOQ81_02140 SM00636 AOQ81_02140 AOQ81_02140 SM00637 AOQ81_02140 AOQ81_02170 SM00530 Helix-turn-helix XRE-family like proteins AOQ81_02195 SM00946 Prolyl-tRNA synthetase, C-terminal AOQ81_02240 SM00831 Cation transporter/ATPase, N-terminus AOQ81_02250 SM00226 Low molecular weight phosphatase family AOQ81_02345 SM00478 endonuclease III AOQ81_02360 SM00530 Helix-turn-helix XRE-family like proteins AOQ81_02375 SM00530 Helix-turn-helix XRE-family like proteins AOQ81_02380 SM00530 Helix-turn-helix XRE-family like proteins AOQ81_02410 SM00382 ATPases associated with a variety of cellular activities AOQ81_02645 SM00382 ATPases associated with a variety of cellular activities AOQ81_02665 SM00530 Helix-turn-helix XRE-family like proteins AOQ81_02725 SM00984 UDP binding domain AOQ81_02810 SM00478 endonuclease III AOQ81_02810 SM00525 AOQ81_02810 AOQ81_02835 SM00382 ATPases associated with a variety of cellular activities AOQ81_02855 SM00382 ATPases associated with a variety of cellular activities AOQ81_03010 SM00567 E-Z type HEAT repeats AOQ81_03025 SM00052 Putative diguanylate phosphodiesterase AOQ81_03025 SM00091 PAS domain AOQ81_03025 SM00267 diguanylate cyclase AOQ81_03035 SM00763 PrkA AAA domain AOQ81_03050 SM00364 Leucine-rich repeats, bacterial type AOQ81_03050 SM00365 Leucine-rich repeat, SDS22-like subfamily AOQ81_03050 SM00369 Leucine-rich repeats, typical (most populated) subfamily AOQ81_03050 SM00725 NEAr Transporter domain AOQ81_03065 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AOQ81_03075 SM00244 prohibitin homologues AOQ81_03080 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOQ81_03080 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ81_03085 SM00091 PAS domain AOQ81_03085 SM00387 Histidine kinase-like ATPases AOQ81_03110 SM00248 ankyrin repeats AOQ81_03120 SM00382 ATPases associated with a variety of cellular activities AOQ81_03145 SM00448 cheY-homologous receiver domain AOQ81_03145 SM00862 Transcriptional regulatory protein, C terminal AOQ81_03150 SM00387 Histidine kinase-like ATPases AOQ81_03150 SM00388 His Kinase A (phosphoacceptor) domain AOQ81_03165 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOQ81_03165 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ81_03170 SM00387 Histidine kinase-like ATPases AOQ81_03175 SM00448 cheY-homologous receiver domain AOQ81_03185 SM00919 Malic enzyme, NAD binding domain AOQ81_03185 SM01274 AOQ81_03185 AOQ81_03200 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOQ81_03210 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ81_03210 SM00387 Histidine kinase-like ATPases AOQ81_03210 SM00388 His Kinase A (phosphoacceptor) domain AOQ81_03215 SM00448 cheY-homologous receiver domain AOQ81_03215 SM00862 Transcriptional regulatory protein, C terminal AOQ81_03235 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AOQ81_03235 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AOQ81_03250 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AOQ81_03250 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AOQ81_03260 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOQ81_03335 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOQ81_03365 SM00382 ATPases associated with a variety of cellular activities AOQ81_03390 SM00327 von Willebrand factor (vWF) type A domain AOQ81_03395 SM00382 ATPases associated with a variety of cellular activities AOQ81_03400 SM00155 Phospholipase D. Active site motifs. AOQ81_03415 SM00052 Putative diguanylate phosphodiesterase AOQ81_03415 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AOQ81_03415 SM00091 PAS domain AOQ81_03415 SM00267 diguanylate cyclase AOQ81_03425 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOQ81_03425 SM00866 AOQ81_03425 AOQ81_03435 SM00642 Alpha-amylase domain AOQ81_03470 SM00382 ATPases associated with a variety of cellular activities AOQ81_03475 SM00062 Bacterial periplasmic substrate-binding proteins AOQ81_03475 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AOQ81_03525 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ81_03525 SM00387 Histidine kinase-like ATPases AOQ81_03525 SM00388 His Kinase A (phosphoacceptor) domain AOQ81_03530 SM00448 cheY-homologous receiver domain AOQ81_03530 SM00862 Transcriptional regulatory protein, C terminal AOQ81_03570 SM00382 ATPases associated with a variety of cellular activities AOQ81_03585 SM00347 helix_turn_helix multiple antibiotic resistance protein AOQ81_03600 SM00354 helix_turn _helix lactose operon repressor AOQ81_03615 SM00382 ATPases associated with a variety of cellular activities AOQ81_03650 SM00829 Enoylreductase AOQ81_03660 SM00770 Zinc dependent phospholipase C (alpha toxin) AOQ81_03695 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOQ81_03705 SM00530 Helix-turn-helix XRE-family like proteins AOQ81_03750 SM00530 Helix-turn-helix XRE-family like proteins AOQ81_03850 SM00899 AOQ81_03850 AOQ81_03990 SM00116 Domain in cystathionine beta-synthase and other proteins. AOQ81_04010 SM00287 Bacterial SH3 domain homologues AOQ81_04020 SM00382 ATPases associated with a variety of cellular activities AOQ81_04105 SM00347 helix_turn_helix multiple antibiotic resistance protein AOQ81_04145 SM00640 Glycosyl hydrolases family 32 AOQ81_04155 SM00354 helix_turn _helix lactose operon repressor AOQ81_04225 SM00347 helix_turn_helix multiple antibiotic resistance protein AOQ81_04240 SM00450 Rhodanese Homology Domain AOQ81_04250 SM00450 Rhodanese Homology Domain AOQ81_04255 SM00450 Rhodanese Homology Domain AOQ81_04255 SM00849 Metallo-beta-lactamase superfamily AOQ81_04265 SM00450 Rhodanese Homology Domain AOQ81_04270 SM00450 Rhodanese Homology Domain AOQ81_04295 SM00829 Enoylreductase AOQ81_04345 SM00287 Bacterial SH3 domain homologues AOQ81_04355 SM00382 ATPases associated with a variety of cellular activities AOQ81_04410 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen AOQ81_04510 SM00344 helix_turn_helix ASNC type AOQ81_04575 SM01060 AOQ81_04575 AOQ81_04610 SM00382 ATPases associated with a variety of cellular activities AOQ81_04620 SM00062 Bacterial periplasmic substrate-binding proteins AOQ81_04620 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AOQ81_04630 SM00382 ATPases associated with a variety of cellular activities AOQ81_04710 SM00729 Elongator protein 3, MiaB family, Radical SAM AOQ81_04745 SM00957 SecA DEAD-like domain AOQ81_04745 SM00958 SecA preprotein cross-linking domain AOQ81_04760 SM00635 Bacterial Ig-like domain 2 AOQ81_04820 SM00646 AOQ81_04820 AOQ81_04890 SM00382 ATPases associated with a variety of cellular activities AOQ81_04905 SM00860 SMI1 / KNR4 family AOQ81_04910 SM00860 SMI1 / KNR4 family AOQ81_04925 SM00091 PAS domain AOQ81_04925 SM00387 Histidine kinase-like ATPases AOQ81_04930 SM00448 cheY-homologous receiver domain AOQ81_04965 SM00422 helix_turn_helix, mercury resistance AOQ81_05090 SM00347 helix_turn_helix multiple antibiotic resistance protein AOQ81_05160 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOQ81_05180 SM00460 Transglutaminase/protease-like homologues AOQ81_05245 SM00331 Sigma factor PP2C-like phosphatases AOQ81_05245 SM00448 cheY-homologous receiver domain AOQ81_05250 SM00138 Methyltransferase, chemotaxis proteins AOQ81_05255 SM00387 Histidine kinase-like ATPases AOQ81_05255 SM00388 His Kinase A (phosphoacceptor) domain AOQ81_05255 SM00448 cheY-homologous receiver domain AOQ81_05295 SM00829 Enoylreductase AOQ81_05335 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOQ81_05360 SM00028 Tetratricopeptide repeats AOQ81_05430 SM00347 helix_turn_helix multiple antibiotic resistance protein AOQ81_05480 SM00347 helix_turn_helix multiple antibiotic resistance protein AOQ81_05495 SM00382 ATPases associated with a variety of cellular activities AOQ81_05560 SM00422 helix_turn_helix, mercury resistance AOQ81_05675 SM00849 Metallo-beta-lactamase superfamily AOQ81_05700 SM00725 NEAr Transporter domain AOQ81_05770 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOQ81_05785 SM00342 helix_turn_helix, arabinose operon control protein AOQ81_05785 SM00871 Bacterial transcription activator, effector binding domain AOQ81_05800 SM00387 Histidine kinase-like ATPases AOQ81_05800 SM00388 His Kinase A (phosphoacceptor) domain AOQ81_05805 SM00448 cheY-homologous receiver domain AOQ81_05805 SM00862 Transcriptional regulatory protein, C terminal AOQ81_05835 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOQ81_05835 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ81_05875 SM00357 Cold shock protein domain AOQ81_05990 SM01060 AOQ81_05990 AOQ81_06005 SM00642 Alpha-amylase domain AOQ81_06010 SM00530 Helix-turn-helix XRE-family like proteins AOQ81_06020 SM00316 Ribosomal protein S1-like RNA-binding domain AOQ81_06070 SM00382 ATPases associated with a variety of cellular activities AOQ81_06070 SM01086 C-terminal, D2-small domain, of ClpB protein AOQ81_06100 SM00825 Beta-ketoacyl synthase AOQ81_06140 SM00382 ATPases associated with a variety of cellular activities AOQ81_06145 SM00382 ATPases associated with a variety of cellular activities AOQ81_06185 SM00155 Phospholipase D. Active site motifs. AOQ81_06215 SM01118 AOQ81_06215 AOQ81_06225 SM00954 Region found in RelA / SpoT proteins AOQ81_06380 SM00635 Bacterial Ig-like domain 2 AOQ81_06495 SM00861 Transketolase, pyrimidine binding domain AOQ81_06500 SM00530 Helix-turn-helix XRE-family like proteins AOQ81_06595 SM00530 Helix-turn-helix XRE-family like proteins AOQ81_06615 SM00382 ATPases associated with a variety of cellular activities AOQ81_06635 SM00014 Acid phosphatase homologues AOQ81_06685 SM00448 cheY-homologous receiver domain AOQ81_06685 SM00862 Transcriptional regulatory protein, C terminal AOQ81_06690 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ81_06690 SM00387 Histidine kinase-like ATPases AOQ81_06690 SM00388 His Kinase A (phosphoacceptor) domain AOQ81_06695 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOQ81_06695 SM00895 AOQ81_06695 AOQ81_06765 SM00822 AOQ81_06765 AOQ81_06830 SM00420 helix_turn_helix, Deoxyribose operon repressor AOQ81_06830 SM01134 AOQ81_06830 AOQ81_06865 SM00387 Histidine kinase-like ATPases AOQ81_06865 SM00388 His Kinase A (phosphoacceptor) domain AOQ81_06870 SM00347 helix_turn_helix multiple antibiotic resistance protein AOQ81_06890 SM00387 Histidine kinase-like ATPases AOQ81_06890 SM00388 His Kinase A (phosphoacceptor) domain AOQ81_06960 SM00465 GIY-YIG type nucleases (URI domain) AOQ81_06960 SM00496 Intron-encoded nuclease repeat 2 AOQ81_06975 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOQ81_06980 SM00382 ATPases associated with a variety of cellular activities AOQ81_06990 SM00382 ATPases associated with a variety of cellular activities AOQ81_07010 SM00344 helix_turn_helix ASNC type AOQ81_07130 SM00347 helix_turn_helix multiple antibiotic resistance protein AOQ81_07205 SM00917 LeuA allosteric (dimerisation) domain AOQ81_07210 SM01329 AOQ81_07210 AOQ81_07395 SM00387 Histidine kinase-like ATPases AOQ81_07400 SM00421 helix_turn_helix, Lux Regulon AOQ81_07400 SM00448 cheY-homologous receiver domain AOQ81_07495 SM00091 PAS domain AOQ81_07495 SM00388 His Kinase A (phosphoacceptor) domain AOQ81_07515 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ81_07515 SM00387 Histidine kinase-like ATPases AOQ81_07515 SM00388 His Kinase A (phosphoacceptor) domain AOQ81_07570 SM00363 S4 RNA-binding domain AOQ81_07590 SM00448 cheY-homologous receiver domain AOQ81_07590 SM00862 Transcriptional regulatory protein, C terminal AOQ81_07595 SM00091 PAS domain AOQ81_07595 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ81_07595 SM00387 Histidine kinase-like ATPases AOQ81_07595 SM00388 His Kinase A (phosphoacceptor) domain AOQ81_07605 SM00257 Lysin motif AOQ81_07630 SM00487 DEAD-like helicases superfamily AOQ81_07630 SM00490 helicase superfamily c-terminal domain AOQ81_07640 SM00257 Lysin motif AOQ81_07650 SM00422 helix_turn_helix, mercury resistance AOQ81_07660 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AOQ81_07675 SM00644 AOQ81_07675 AOQ81_07685 SM00870 AOQ81_07685 AOQ81_07700 SM00316 Ribosomal protein S1-like RNA-binding domain AOQ81_07705 SM01240 AOQ81_07705 AOQ81_07760 SM00411 bacterial (prokaryotic) histone like domain AOQ81_07785 SM00562 AOQ81_07785 AOQ81_07805 SM00028 Tetratricopeptide repeats AOQ81_07810 SM00914 AOQ81_07810 AOQ81_07855 SM00986 Uracil DNA glycosylase superfamily AOQ81_07855 SM00987 UreE urease accessory protein, C-terminal domain AOQ81_07875 SM00851 MGS-like domain AOQ81_07925 SM00479 AOQ81_07925 AOQ81_07925 SM00487 DEAD-like helicases superfamily AOQ81_07925 SM00491 AOQ81_07925 AOQ81_07950 SM00478 endonuclease III AOQ81_07950 SM00525 AOQ81_07950 AOQ81_07960 SM00060 Fibronectin type 3 domain AOQ81_08010 SM00981 AOQ81_08010 AOQ81_08020 SM00491 AOQ81_08020 AOQ81_08080 SM00450 Rhodanese Homology Domain AOQ81_08110 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AOQ81_08110 SM00475 5'-3' exonuclease AOQ81_08220 SM00357 Cold shock protein domain AOQ81_08270 SM00849 Metallo-beta-lactamase superfamily AOQ81_08275 SM00422 helix_turn_helix, mercury resistance AOQ81_08275 SM00871 Bacterial transcription activator, effector binding domain AOQ81_08365 SM00448 cheY-homologous receiver domain AOQ81_08390 SM00138 Methyltransferase, chemotaxis proteins AOQ81_08475 SM00382 ATPases associated with a variety of cellular activities AOQ81_08540 SM00028 Tetratricopeptide repeats AOQ81_08560 SM00028 Tetratricopeptide repeats AOQ81_08645 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AOQ81_08700 SM00530 Helix-turn-helix XRE-family like proteins AOQ81_08720 SM00382 ATPases associated with a variety of cellular activities AOQ81_08735 SM00849 Metallo-beta-lactamase superfamily AOQ81_08735 SM01027 Beta-Casp domain AOQ81_08755 SM00835 Cupin AOQ81_08770 SM00855 Phosphoglycerate mutase family AOQ81_08830 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOQ81_08830 SM00895 AOQ81_08830 AOQ81_08840 SM00833 Cobalamin synthesis protein cobW C-terminal domain AOQ81_08930 SM00530 Helix-turn-helix XRE-family like proteins AOQ81_08975 SM00421 helix_turn_helix, Lux Regulon AOQ81_08975 SM00448 cheY-homologous receiver domain AOQ81_08985 SM00382 ATPases associated with a variety of cellular activities AOQ81_09000 SM00155 Phospholipase D. Active site motifs. AOQ81_09020 SM00919 Malic enzyme, NAD binding domain AOQ81_09020 SM01274 AOQ81_09020 AOQ81_09025 SM00387 Histidine kinase-like ATPases AOQ81_09030 SM00448 cheY-homologous receiver domain AOQ81_09035 SM00487 DEAD-like helicases superfamily AOQ81_09035 SM00490 helicase superfamily c-terminal domain AOQ81_09100 SM00646 AOQ81_09100 AOQ81_09105 SM00047 Lysozyme subfamily 2 AOQ81_09280 SM00854 Bacterial capsule synthesis protein PGA_cap AOQ81_09310 SM00850 LytTr DNA-binding domain AOQ81_09365 SM00729 Elongator protein 3, MiaB family, Radical SAM AOQ81_09375 SM00448 cheY-homologous receiver domain AOQ81_09375 SM00862 Transcriptional regulatory protein, C terminal AOQ81_09395 SM00450 Rhodanese Homology Domain AOQ81_09445 SM01133 AOQ81_09445 AOQ81_09455 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AOQ81_09490 SM01011 Aminopeptidase P, N-terminal domain AOQ81_09500 SM00287 Bacterial SH3 domain homologues AOQ81_09510 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AOQ81_09510 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AOQ81_09510 SM00493 AOQ81_09510 AOQ81_09605 SM00833 Cobalamin synthesis protein cobW C-terminal domain AOQ81_09640 SM00382 ATPases associated with a variety of cellular activities AOQ81_09645 SM00382 ATPases associated with a variety of cellular activities AOQ81_09680 SM00347 helix_turn_helix multiple antibiotic resistance protein AOQ81_09700 SM00382 ATPases associated with a variety of cellular activities AOQ81_09705 SM00382 ATPases associated with a variety of cellular activities AOQ81_09740 SM00287 Bacterial SH3 domain homologues AOQ81_09755 SM00382 ATPases associated with a variety of cellular activities AOQ81_09760 SM00448 cheY-homologous receiver domain AOQ81_09760 SM00862 Transcriptional regulatory protein, C terminal AOQ81_09765 SM00387 Histidine kinase-like ATPases AOQ81_09765 SM00388 His Kinase A (phosphoacceptor) domain AOQ81_09845 SM00448 cheY-homologous receiver domain AOQ81_09845 SM00862 Transcriptional regulatory protein, C terminal AOQ81_09850 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ81_09850 SM00387 Histidine kinase-like ATPases AOQ81_09850 SM00388 His Kinase A (phosphoacceptor) domain AOQ81_09940 SM00460 Transglutaminase/protease-like homologues AOQ81_09965 SM00966 SpoVT / AbrB like domain AOQ81_09975 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOQ81_10010 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOQ81_10010 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ81_10075 SM00833 Cobalamin synthesis protein cobW C-terminal domain AOQ81_10185 SM00855 Phosphoglycerate mutase family AOQ81_10235 SM00155 Phospholipase D. Active site motifs. AOQ81_10260 SM01091 Transporter associated domain AOQ81_10335 SM00244 prohibitin homologues AOQ81_10340 SM00855 Phosphoglycerate mutase family AOQ81_10355 SM01005 Alanine racemase, C-terminal domain AOQ81_10385 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOQ81_10500 SM00487 DEAD-like helicases superfamily AOQ81_10500 SM00490 helicase superfamily c-terminal domain AOQ81_10520 SM00829 Enoylreductase AOQ81_10540 SM00849 Metallo-beta-lactamase superfamily AOQ81_10555 SM00460 Transglutaminase/protease-like homologues AOQ81_10580 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AOQ81_10600 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOQ81_10605 SM00382 ATPases associated with a variety of cellular activities AOQ81_10615 SM00100 Cyclic nucleotide-monophosphate binding domain AOQ81_10615 SM00419 helix_turn_helix, cAMP Regulatory protein AOQ81_10620 SM00729 Elongator protein 3, MiaB family, Radical SAM AOQ81_10630 SM00852 Probable molybdopterin binding domain AOQ81_10695 SM00894 Excalibur calcium-binding domain AOQ81_10750 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOQ81_10755 SM00382 ATPases associated with a variety of cellular activities AOQ81_10790 SM00567 E-Z type HEAT repeats AOQ81_10790 SM00932 Scaffold protein Nfu/NifU N terminal AOQ81_10810 SM00836 DALR anticodon binding domain AOQ81_10810 SM01016 Arginyl tRNA synthetase N terminal dom AOQ81_10860 SM00327 von Willebrand factor (vWF) type A domain AOQ81_10875 SM00382 ATPases associated with a variety of cellular activities AOQ81_10920 SM00857 Resolvase, N terminal domain AOQ81_10980 SM00448 cheY-homologous receiver domain AOQ81_10980 SM00862 Transcriptional regulatory protein, C terminal AOQ81_10985 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ81_10985 SM00387 Histidine kinase-like ATPases AOQ81_10985 SM00388 His Kinase A (phosphoacceptor) domain AOQ81_11060 SM00382 ATPases associated with a variety of cellular activities AOQ81_11120 SM00563 Phosphate acyltransferases AOQ81_11230 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AOQ81_11235 SM00421 helix_turn_helix, Lux Regulon AOQ81_11235 SM00448 cheY-homologous receiver domain AOQ81_11250 SM00829 Enoylreductase AOQ81_11315 SM00382 ATPases associated with a variety of cellular activities AOQ81_11355 SM01091 Transporter associated domain AOQ81_11370 SM00387 Histidine kinase-like ATPases AOQ81_11370 SM00388 His Kinase A (phosphoacceptor) domain AOQ81_11385 SM00882 Coenzyme A transferase AOQ81_11390 SM00882 Coenzyme A transferase AOQ81_11405 SM00382 ATPases associated with a variety of cellular activities AOQ81_11445 SM00219 Tyrosine kinase, catalytic domain AOQ81_11455 SM00014 Acid phosphatase homologues AOQ81_11475 SM00860 SMI1 / KNR4 family AOQ81_11500 SM00530 Helix-turn-helix XRE-family like proteins AOQ81_11560 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. AOQ81_11710 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOQ81_11750 SM00823 Phosphopantetheine attachment site AOQ81_11750 SM00824 Thioesterase AOQ81_11755 SM00923 MbtH-like protein AOQ81_11775 SM00411 bacterial (prokaryotic) histone like domain AOQ81_11820 SM00363 S4 RNA-binding domain AOQ81_11825 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AOQ81_11880 SM00849 Metallo-beta-lactamase superfamily AOQ81_11910 SM00849 Metallo-beta-lactamase superfamily AOQ81_11930 SM01059 Chloramphenicol acetyltransferase AOQ81_11955 SM00530 Helix-turn-helix XRE-family like proteins AOQ81_11995 SM00357 Cold shock protein domain AOQ81_12065 SM00859 Semialdehyde dehydrogenase, NAD binding domain AOQ81_12100 SM00382 ATPases associated with a variety of cellular activities AOQ81_12105 SM00382 ATPases associated with a variety of cellular activities AOQ81_12115 SM00646 AOQ81_12115 AOQ81_12125 SM00530 Helix-turn-helix XRE-family like proteins AOQ81_12140 SM00835 Cupin AOQ81_12210 SM01207 AOQ81_12210 AOQ81_12235 SM00849 Metallo-beta-lactamase superfamily AOQ81_12250 SM00487 DEAD-like helicases superfamily AOQ81_12250 SM00490 helicase superfamily c-terminal domain AOQ81_12280 SM00382 ATPases associated with a variety of cellular activities AOQ81_12305 SM00347 helix_turn_helix multiple antibiotic resistance protein AOQ81_12310 SM00855 Phosphoglycerate mutase family AOQ81_12385 SM00014 Acid phosphatase homologues AOQ81_12390 SM00354 helix_turn _helix lactose operon repressor AOQ81_12470 SM00530 Helix-turn-helix XRE-family like proteins AOQ81_12495 SM00646 AOQ81_12495 AOQ81_12510 SM00382 ATPases associated with a variety of cellular activities AOQ81_12520 SM00052 Putative diguanylate phosphodiesterase AOQ81_12520 SM00091 PAS domain AOQ81_12520 SM00267 diguanylate cyclase AOQ81_12530 SM00860 SMI1 / KNR4 family AOQ81_12540 SM00450 Rhodanese Homology Domain AOQ81_12540 SM00849 Metallo-beta-lactamase superfamily AOQ81_12555 SM00382 ATPases associated with a variety of cellular activities AOQ81_12585 SM00878 Biotin carboxylase C-terminal domain AOQ81_12650 SM00387 Histidine kinase-like ATPases AOQ81_12650 SM00388 His Kinase A (phosphoacceptor) domain AOQ81_12655 SM00448 cheY-homologous receiver domain AOQ81_12655 SM00862 Transcriptional regulatory protein, C terminal AOQ81_12710 SM00382 ATPases associated with a variety of cellular activities AOQ81_12730 SM00422 helix_turn_helix, mercury resistance AOQ81_12730 SM00871 Bacterial transcription activator, effector binding domain AOQ81_12760 SM00342 helix_turn_helix, arabinose operon control protein AOQ81_12775 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOQ81_12835 SM00448 cheY-homologous receiver domain AOQ81_12835 SM00862 Transcriptional regulatory protein, C terminal AOQ81_12865 SM00382 ATPases associated with a variety of cellular activities AOQ81_12895 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOQ81_12900 SM01209 AOQ81_12900 AOQ81_13025 SM00091 PAS domain AOQ81_13025 SM00387 Histidine kinase-like ATPases AOQ81_13025 SM00388 His Kinase A (phosphoacceptor) domain AOQ81_13050 SM00382 ATPases associated with a variety of cellular activities AOQ81_13060 SM00387 Histidine kinase-like ATPases AOQ81_13060 SM00388 His Kinase A (phosphoacceptor) domain AOQ81_13075 SM00829 Enoylreductase AOQ81_13080 SM00740 AOQ81_13080 AOQ81_13150 SM00422 helix_turn_helix, mercury resistance AOQ81_13245 SM00480 DNA polymerase III beta subunit AOQ81_13355 SM00465 GIY-YIG type nucleases (URI domain) AOQ81_13455 SM00642 Alpha-amylase domain AOQ81_13475 SM00871 Bacterial transcription activator, effector binding domain AOQ81_13495 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOQ81_13610 SM00382 ATPases associated with a variety of cellular activities AOQ81_13630 SM00420 helix_turn_helix, Deoxyribose operon repressor AOQ81_13630 SM01134 AOQ81_13630 AOQ81_13675 SM00861 Transketolase, pyrimidine binding domain AOQ81_13735 SM00116 Domain in cystathionine beta-synthase and other proteins. AOQ81_13735 SM00382 ATPases associated with a variety of cellular activities AOQ81_13770 SM00060 Fibronectin type 3 domain AOQ81_13770 SM00495 Chitin-binding domain type 3 AOQ81_13815 SM00849 Metallo-beta-lactamase superfamily AOQ81_13885 SM00341 Helicase and RNase D C-terminal AOQ81_13885 SM00487 DEAD-like helicases superfamily AOQ81_13885 SM00490 helicase superfamily c-terminal domain AOQ81_13885 SM00956 AOQ81_13885 AOQ81_13935 SM01131 AOQ81_13935 AOQ81_13965 SM01130 AOQ81_13965 AOQ81_13985 SM00091 PAS domain AOQ81_13985 SM00382 ATPases associated with a variety of cellular activities AOQ81_14055 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AOQ81_14095 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AOQ81_14100 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ81_14100 SM00387 Histidine kinase-like ATPases AOQ81_14100 SM00388 His Kinase A (phosphoacceptor) domain AOQ81_14105 SM00448 cheY-homologous receiver domain AOQ81_14105 SM00862 Transcriptional regulatory protein, C terminal AOQ81_14295 SM00382 ATPases associated with a variety of cellular activities AOQ81_14370 SM00062 Bacterial periplasmic substrate-binding proteins AOQ81_14375 SM00382 ATPases associated with a variety of cellular activities AOQ81_14405 SM00028 Tetratricopeptide repeats AOQ81_14495 SM00382 ATPases associated with a variety of cellular activities AOQ81_14550 SM00830 Chorismate mutase type II AOQ81_14585 SM00287 Bacterial SH3 domain homologues AOQ81_14635 SM00382 ATPases associated with a variety of cellular activities AOQ81_14655 SM01133 AOQ81_14655 AOQ81_14685 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOQ81_14705 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AOQ81_14720 SM00346 helix_turn_helix isocitrate lyase regulation AOQ81_14740 SM00098 Alkaline phosphatase homologues AOQ81_14750 SM00530 Helix-turn-helix XRE-family like proteins AOQ81_14775 SM00850 LytTr DNA-binding domain AOQ81_14875 SM01060 AOQ81_14875 AOQ81_14925 SM00347 helix_turn_helix multiple antibiotic resistance protein AOQ81_14930 SM00889 Elongation factor G, domain IV AOQ81_14955 SM00382 ATPases associated with a variety of cellular activities AOQ81_14960 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOQ81_14970 SM00382 ATPases associated with a variety of cellular activities AOQ81_14995 SM00342 helix_turn_helix, arabinose operon control protein AOQ81_14995 SM00871 Bacterial transcription activator, effector binding domain AOQ81_15020 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOQ81_15040 SM00387 Histidine kinase-like ATPases AOQ81_15040 SM00388 His Kinase A (phosphoacceptor) domain AOQ81_15045 SM00448 cheY-homologous receiver domain AOQ81_15045 SM00862 Transcriptional regulatory protein, C terminal AOQ81_15190 SM00796 Allophanate hydrolase subunit 1 AOQ81_15195 SM00346 helix_turn_helix isocitrate lyase regulation AOQ81_15215 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOQ81_15280 SM00849 Metallo-beta-lactamase superfamily AOQ81_15360 SM00870 AOQ81_15360 AOQ81_15365 SM00530 Helix-turn-helix XRE-family like proteins AOQ81_15400 SM00919 Malic enzyme, NAD binding domain AOQ81_15400 SM01274 AOQ81_15400 AOQ81_15430 SM00448 cheY-homologous receiver domain AOQ81_15475 SM01060 AOQ81_15475 AOQ81_15605 SM00382 ATPases associated with a variety of cellular activities AOQ81_15630 SM00226 Low molecular weight phosphatase family AOQ81_15645 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOQ81_15655 SM00028 Tetratricopeptide repeats AOQ81_15675 SM00344 helix_turn_helix ASNC type AOQ81_15710 SM00342 helix_turn_helix, arabinose operon control protein AOQ81_15745 SM00347 helix_turn_helix multiple antibiotic resistance protein AOQ81_15785 SM00448 cheY-homologous receiver domain AOQ81_15785 SM00862 Transcriptional regulatory protein, C terminal AOQ81_15790 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ81_15790 SM00387 Histidine kinase-like ATPases AOQ81_15790 SM00388 His Kinase A (phosphoacceptor) domain AOQ81_15845 SM00530 Helix-turn-helix XRE-family like proteins AOQ81_15895 SM00382 ATPases associated with a variety of cellular activities AOQ81_15905 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOQ81_15920 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ81_15920 SM00387 Histidine kinase-like ATPases AOQ81_15920 SM00388 His Kinase A (phosphoacceptor) domain AOQ81_15925 SM00448 cheY-homologous receiver domain AOQ81_15925 SM00862 Transcriptional regulatory protein, C terminal AOQ81_15935 SM00347 helix_turn_helix multiple antibiotic resistance protein AOQ81_16030 SM00354 helix_turn _helix lactose operon repressor AOQ81_16035 SM00028 Tetratricopeptide repeats AOQ81_16070 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOQ81_16070 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ81_16070 SM00319 Homologues of the ligand binding domain of Tar AOQ81_16090 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AOQ81_16115 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOQ81_16160 SM00344 helix_turn_helix ASNC type AOQ81_16225 SM00342 helix_turn_helix, arabinose operon control protein AOQ81_16240 SM00287 Bacterial SH3 domain homologues AOQ81_16290 SM00347 helix_turn_helix multiple antibiotic resistance protein AOQ81_16315 SM00382 ATPases associated with a variety of cellular activities AOQ81_16325 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOQ81_16395 SM00382 ATPases associated with a variety of cellular activities AOQ81_16440 SM00530 Helix-turn-helix XRE-family like proteins AOQ81_16445 SM01207 AOQ81_16445 AOQ81_16505 SM00382 ATPases associated with a variety of cellular activities AOQ81_16520 SM00530 Helix-turn-helix XRE-family like proteins AOQ81_16580 SM01266 AOQ81_16580 AOQ81_16595 SM00382 ATPases associated with a variety of cellular activities AOQ81_16645 SM00028 Tetratricopeptide repeats AOQ81_16670 SM01091 Transporter associated domain AOQ81_16675 SM00422 helix_turn_helix, mercury resistance AOQ81_16715 SM01350 AOQ81_16715 AOQ81_16720 SM00861 Transketolase, pyrimidine binding domain AOQ81_16735 SM00829 Enoylreductase AOQ81_16750 SM00829 Enoylreductase AOQ81_16770 SM01276 AOQ81_16770 AOQ81_16815 SM00914 AOQ81_16815 AOQ81_16850 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOQ81_16850 SM00866 AOQ81_16850 AOQ81_16885 SM00849 Metallo-beta-lactamase superfamily AOQ81_16950 SM00248 ankyrin repeats AOQ81_16955 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOQ81_16995 SM00871 Bacterial transcription activator, effector binding domain AOQ81_17015 SM00382 ATPases associated with a variety of cellular activities AOQ81_17040 SM00849 Metallo-beta-lactamase superfamily AOQ81_17045 SM00641 Glycosyl hydrolases family 25 AOQ81_17110 SM00849 Metallo-beta-lactamase superfamily AOQ81_17245 SM00829 Enoylreductase AOQ81_17250 SM00855 Phosphoglycerate mutase family AOQ81_17260 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AOQ81_17260 SM00534 ATPase domain of DNA mismatch repair MUTS family AOQ81_17270 SM00642 Alpha-amylase domain AOQ81_17340 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOQ81_17345 SM00829 Enoylreductase AOQ81_17430 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AOQ81_17475 SM00479 AOQ81_17475 AOQ81_17480 SM00357 Cold shock protein domain AOQ81_17505 SM01022 AOQ81_17505 AOQ81_17615 SM00852 Probable molybdopterin binding domain AOQ81_17630 SM00729 Elongator protein 3, MiaB family, Radical SAM AOQ81_17650 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AOQ81_17650 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AOQ81_17760 SM00382 ATPases associated with a variety of cellular activities AOQ81_17775 SM00434 DNA Topoisomerase IV AOQ81_17780 SM00387 Histidine kinase-like ATPases AOQ81_17780 SM00433 TopoisomeraseII AOQ81_17790 SM00881 CoA binding domain AOQ81_17795 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AOQ81_17800 SM00448 cheY-homologous receiver domain AOQ81_17800 SM00862 Transcriptional regulatory protein, C terminal AOQ81_17815 SM01207 AOQ81_17815 AOQ81_17830 SM00257 Lysin motif AOQ81_17830 SM00636 AOQ81_17830 AOQ81_17850 SM00479 AOQ81_17850 AOQ81_17865 SM00382 ATPases associated with a variety of cellular activities AOQ81_17910 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AOQ81_17975 SM00644 AOQ81_17975 AOQ81_17975 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. AOQ81_17980 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AOQ81_17995 SM00091 PAS domain AOQ81_17995 SM00387 Histidine kinase-like ATPases AOQ81_17995 SM00388 His Kinase A (phosphoacceptor) domain AOQ81_18025 SM01058 CarD-like/TRCF domain AOQ81_18160 SM00644 AOQ81_18160 AOQ81_18175 SM00382 ATPases associated with a variety of cellular activities AOQ81_18180 SM00382 ATPases associated with a variety of cellular activities AOQ81_18195 SM00861 Transketolase, pyrimidine binding domain AOQ81_18220 SM00382 ATPases associated with a variety of cellular activities AOQ81_18225 SM00062 Bacterial periplasmic substrate-binding proteins AOQ81_18245 SM00857 Resolvase, N terminal domain AOQ81_18270 SM00028 Tetratricopeptide repeats AOQ81_18300 SM00287 Bacterial SH3 domain homologues AOQ81_18300 SM00644 AOQ81_18300 AOQ81_18460 SM00530 Helix-turn-helix XRE-family like proteins AOQ81_18540 SM00382 ATPases associated with a variety of cellular activities AOQ81_18590 SM00530 Helix-turn-helix XRE-family like proteins AOQ81_18595 SM00530 Helix-turn-helix XRE-family like proteins AOQ81_18620 SM01230 AOQ81_18620 AOQ81_18625 SM00422 helix_turn_helix, mercury resistance AOQ81_18645 SM00382 ATPases associated with a variety of cellular activities AOQ81_18675 SM00287 Bacterial SH3 domain homologues AOQ81_18690 SM00420 helix_turn_helix, Deoxyribose operon repressor AOQ81_18690 SM01134 AOQ81_18690 AOQ81_18720 SM00636 AOQ81_18720 AOQ81_18735 SM00411 bacterial (prokaryotic) histone like domain AOQ81_18765 SM00382 ATPases associated with a variety of cellular activities AOQ81_18795 SM00342 helix_turn_helix, arabinose operon control protein AOQ81_18805 SM00478 endonuclease III AOQ81_18840 SM00052 Putative diguanylate phosphodiesterase AOQ81_18840 SM00091 PAS domain AOQ81_18840 SM00267 diguanylate cyclase AOQ81_18870 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOQ81_18890 SM00148 Phospholipase C, catalytic domain (part); domain X AOQ81_18900 SM00257 Lysin motif AOQ81_18930 SM00387 Histidine kinase-like ATPases AOQ81_18930 SM00388 His Kinase A (phosphoacceptor) domain AOQ81_18935 SM00448 cheY-homologous receiver domain AOQ81_18935 SM00862 Transcriptional regulatory protein, C terminal AOQ81_18950 SM00382 ATPases associated with a variety of cellular activities AOQ81_18955 SM00853 MutL C terminal dimerisation domain AOQ81_18955 SM01340 AOQ81_18955 AOQ81_18960 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AOQ81_18960 SM00534 ATPase domain of DNA mismatch repair MUTS family AOQ81_18975 SM00729 Elongator protein 3, MiaB family, Radical SAM AOQ81_19005 SM00322 K homology RNA-binding domain AOQ81_19005 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOQ81_19020 SM00852 Probable molybdopterin binding domain AOQ81_19075 SM00382 ATPases associated with a variety of cellular activities AOQ81_19085 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOQ81_19085 SM00866 AOQ81_19085 AOQ81_19090 SM00382 ATPases associated with a variety of cellular activities AOQ81_19090 SM00843 AOQ81_19090 AOQ81_19105 SM00849 Metallo-beta-lactamase superfamily AOQ81_19115 SM01130 AOQ81_19115 AOQ81_19125 SM00859 Semialdehyde dehydrogenase, NAD binding domain AOQ81_19155 SM00316 Ribosomal protein S1-like RNA-binding domain AOQ81_19155 SM00322 K homology RNA-binding domain AOQ81_19160 SM01387 AOQ81_19160 AOQ81_19165 SM00904 Riboflavin kinase AOQ81_19200 SM00316 Ribosomal protein S1-like RNA-binding domain AOQ81_19200 SM00322 K homology RNA-binding domain AOQ81_19210 SM00479 AOQ81_19210 AOQ81_19210 SM00481 DNA polymerase alpha chain like domain AOQ81_19220 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AOQ81_19265 SM00382 ATPases associated with a variety of cellular activities AOQ81_19265 SM01086 C-terminal, D2-small domain, of ClpB protein AOQ81_19285 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AOQ81_19285 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AOQ81_19285 SM00493 AOQ81_19285 AOQ81_19295 SM00881 CoA binding domain AOQ81_19345 SM00382 ATPases associated with a variety of cellular activities AOQ81_19345 SM00962 SRP54-type protein, GTPase domain AOQ81_19345 SM00963 SRP54-type protein, helical bundle domain AOQ81_19355 SM00382 ATPases associated with a variety of cellular activities AOQ81_19355 SM00962 SRP54-type protein, GTPase domain AOQ81_19355 SM00963 SRP54-type protein, helical bundle domain AOQ81_19360 SM00968 SMC proteins Flexible Hinge Domain AOQ81_19365 SM00358 Double-stranded RNA binding motif AOQ81_19365 SM00535 Ribonuclease III family AOQ81_19375 SM00822 AOQ81_19375 AOQ81_19380 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AOQ81_19395 SM00487 DEAD-like helicases superfamily AOQ81_19395 SM00490 helicase superfamily c-terminal domain AOQ81_19400 SM01120 AOQ81_19400 AOQ81_19400 SM01121 AOQ81_19400 AOQ81_19420 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain AOQ81_19435 SM00220 Serine/Threonine protein kinases, catalytic domain AOQ81_19435 SM00740 AOQ81_19435 AOQ81_19440 SM00331 Sigma factor PP2C-like phosphatases AOQ81_19440 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AOQ81_19465 SM00487 DEAD-like helicases superfamily AOQ81_19465 SM00490 helicase superfamily c-terminal domain AOQ81_19475 SM01409 AOQ81_19475 AOQ81_19480 SM00072 Guanylate kinase homologues. AOQ81_19495 SM00831 Cation transporter/ATPase, N-terminus AOQ81_19540 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AOQ81_19555 SM00851 MGS-like domain AOQ81_19555 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AOQ81_19555 SM01209 AOQ81_19555 AOQ81_19560 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AOQ81_19585 SM00363 S4 RNA-binding domain AOQ81_19610 SM00363 S4 RNA-binding domain AOQ81_19655 SM00864 Tubulin/FtsZ family, GTPase domain AOQ81_19655 SM00865 Tubulin/FtsZ family, C-terminal domain AOQ81_19660 SM00842 Cell division protein FtsA AOQ81_19700 SM00740 AOQ81_19700 AOQ81_19705 SM00740 AOQ81_19705 AOQ81_19735 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains AOQ81_19775 SM00530 Helix-turn-helix XRE-family like proteins AOQ81_19790 SM00644 AOQ81_19790 AOQ81_19900 SM00507 HNH nucleases AOQ81_19945 SM00530 Helix-turn-helix XRE-family like proteins AOQ81_20015 SM00382 ATPases associated with a variety of cellular activities AOQ81_20040 SM00530 Helix-turn-helix XRE-family like proteins AOQ81_20045 SM00530 Helix-turn-helix XRE-family like proteins AOQ81_20055 SM00530 Helix-turn-helix XRE-family like proteins AOQ81_20080 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AOQ81_20120 SM00855 Phosphoglycerate mutase family AOQ81_20185 SM00878 Biotin carboxylase C-terminal domain AOQ81_20205 SM00670 Large family of predicted nucleotide-binding domains AOQ81_20230 SM00838 Elongation factor G C-terminus AOQ81_20310 SM00861 Transketolase, pyrimidine binding domain AOQ81_20340 SM00849 Metallo-beta-lactamase superfamily AOQ81_20405 SM00052 Putative diguanylate phosphodiesterase AOQ81_20500 SM00387 Histidine kinase-like ATPases AOQ81_20500 SM00388 His Kinase A (phosphoacceptor) domain AOQ81_20515 SM00354 helix_turn _helix lactose operon repressor AOQ81_20535 SM00642 Alpha-amylase domain AOQ81_20540 SM00642 Alpha-amylase domain AOQ81_20545 SM00382 ATPases associated with a variety of cellular activities AOQ81_20580 SM00382 ATPases associated with a variety of cellular activities AOQ81_20670 SM01007 Class II Aldolase and Adducin N-terminal domain AOQ81_20695 SM00267 diguanylate cyclase AOQ81_20730 SM01061 CAT RNA binding domain AOQ81_20740 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOQ81_20740 SM00866 AOQ81_20740 AOQ81_20755 SM00849 Metallo-beta-lactamase superfamily AOQ81_20860 SM00387 Histidine kinase-like ATPases AOQ81_20870 SM00936 Penicillin-binding protein 5, C-terminal domain AOQ81_20875 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOQ81_20880 SM00382 ATPases associated with a variety of cellular activities AOQ81_20900 SM00347 helix_turn_helix multiple antibiotic resistance protein AOQ81_20920 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AOQ81_21015 SM00354 helix_turn _helix lactose operon repressor AOQ81_21035 SM00704 CDGSH-type zinc finger. Function unknown. AOQ81_21065 SM00729 Elongator protein 3, MiaB family, Radical SAM AOQ81_21065 SM00876 Biotin and Thiamin Synthesis associated domain AOQ81_21115 SM00347 helix_turn_helix multiple antibiotic resistance protein AOQ81_21150 SM00859 Semialdehyde dehydrogenase, NAD binding domain AOQ81_21195 SM00849 Metallo-beta-lactamase superfamily AOQ81_21245 SM00382 ATPases associated with a variety of cellular activities AOQ81_21255 SM00062 Bacterial periplasmic substrate-binding proteins AOQ81_21255 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AOQ81_21290 SM00861 Transketolase, pyrimidine binding domain AOQ81_21310 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AOQ81_21325 SM00091 PAS domain AOQ81_21325 SM00382 ATPases associated with a variety of cellular activities AOQ81_21350 SM00448 cheY-homologous receiver domain AOQ81_21360 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AOQ81_21375 SM00363 S4 RNA-binding domain AOQ81_21380 SM00861 Transketolase, pyrimidine binding domain AOQ81_21415 SM00878 Biotin carboxylase C-terminal domain AOQ81_21465 SM00382 ATPases associated with a variety of cellular activities AOQ81_21485 SM00841 Elongation factor P, C-terminal AOQ81_21485 SM01185 AOQ81_21485 AOQ81_21520 SM00529 Helix-turn-helix diphteria tox regulatory element AOQ81_21540 SM00450 Rhodanese Homology Domain AOQ81_21545 SM00354 helix_turn _helix lactose operon repressor AOQ81_21580 SM00382 ATPases associated with a variety of cellular activities AOQ81_21585 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOQ81_21615 SM00487 DEAD-like helicases superfamily AOQ81_21615 SM00490 helicase superfamily c-terminal domain AOQ81_21650 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AOQ81_21685 SM00382 ATPases associated with a variety of cellular activities AOQ81_21740 SM01018 B12 binding domain AOQ81_21775 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOQ81_21785 SM00849 Metallo-beta-lactamase superfamily AOQ81_21825 SM00382 ATPases associated with a variety of cellular activities AOQ81_21890 SM00382 ATPases associated with a variety of cellular activities AOQ81_21905 SM00518 AP endonuclease family 2 AOQ81_21910 SM00487 DEAD-like helicases superfamily AOQ81_21910 SM00490 helicase superfamily c-terminal domain AOQ81_21945 SM00400 zinc finger AOQ81_21945 SM00493 AOQ81_21945 AOQ81_21945 SM00766 DNA primase DnaG DnaB-binding AOQ81_21965 SM00116 Domain in cystathionine beta-synthase and other proteins. AOQ81_22000 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOQ81_22035 SM00729 Elongator protein 3, MiaB family, Radical SAM AOQ81_22050 SM00271 DnaJ molecular chaperone homology domain AOQ81_22070 SM00729 Elongator protein 3, MiaB family, Radical SAM AOQ81_22080 SM00838 Elongation factor G C-terminus AOQ81_22110 SM00849 Metallo-beta-lactamase superfamily AOQ81_22120 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AOQ81_22140 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOQ81_22150 SM01103 AOQ81_22150 AOQ81_22205 SM00954 Region found in RelA / SpoT proteins AOQ81_22215 SM00098 Alkaline phosphatase homologues AOQ81_22240 SM00855 Phosphoglycerate mutase family AOQ81_22290 SM00530 Helix-turn-helix XRE-family like proteins AOQ81_22315 SM00382 ATPases associated with a variety of cellular activities AOQ81_22410 SM00732 Likely ribonuclease with RNase H fold. AOQ81_22420 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AOQ81_22455 SM00028 Tetratricopeptide repeats AOQ81_22475 SM00382 ATPases associated with a variety of cellular activities AOQ81_22510 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOQ81_22510 SM00954 Region found in RelA / SpoT proteins AOQ81_22555 SM01323 AOQ81_22555 AOQ81_22575 SM00382 ATPases associated with a variety of cellular activities AOQ81_22580 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AOQ81_22605 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOQ81_22620 SM00257 Lysin motif AOQ81_22670 SM00382 ATPases associated with a variety of cellular activities AOQ81_22675 SM00387 Histidine kinase-like ATPases AOQ81_22685 SM00448 cheY-homologous receiver domain AOQ81_22685 SM00862 Transcriptional regulatory protein, C terminal AOQ81_22695 SM01317 AOQ81_22695 AOQ81_22785 SM00257 Lysin motif AOQ81_22795 SM01004 Delta-aminolevulinic acid dehydratase AOQ81_22820 SM00347 helix_turn_helix multiple antibiotic resistance protein AOQ81_22835 SM00382 ATPases associated with a variety of cellular activities AOQ81_22835 SM00464 Found in ATP-dependent protease La (LON) AOQ81_22840 SM00382 ATPases associated with a variety of cellular activities AOQ81_22845 SM00382 ATPases associated with a variety of cellular activities AOQ81_22845 SM00994 ClpX C4-type zinc finger AOQ81_22845 SM01086 C-terminal, D2-small domain, of ClpB protein AOQ81_22905 SM00909 Sporulation and spore germination AOQ81_22940 SM00421 helix_turn_helix, Lux Regulon AOQ81_22980 SM00382 ATPases associated with a variety of cellular activities AOQ81_22985 SM00382 ATPases associated with a variety of cellular activities AOQ81_22995 SM00342 helix_turn_helix, arabinose operon control protein AOQ81_22995 SM00448 cheY-homologous receiver domain AOQ81_23015 SM00530 Helix-turn-helix XRE-family like proteins AOQ81_23040 SM00382 ATPases associated with a variety of cellular activities AOQ81_23090 SM00465 GIY-YIG type nucleases (URI domain) AOQ81_23100 SM00893 Electron transfer flavoprotein domain AOQ81_23105 SM00893 Electron transfer flavoprotein domain AOQ81_23170 SM00382 ATPases associated with a variety of cellular activities AOQ81_23175 SM00387 Histidine kinase-like ATPases AOQ81_23175 SM00388 His Kinase A (phosphoacceptor) domain AOQ81_23180 SM00448 cheY-homologous receiver domain AOQ81_23180 SM00862 Transcriptional regulatory protein, C terminal AOQ81_23195 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AOQ81_23215 SM00382 ATPases associated with a variety of cellular activities AOQ81_23230 SM00725 NEAr Transporter domain AOQ81_23235 SM00725 NEAr Transporter domain AOQ81_23240 SM00725 NEAr Transporter domain AOQ81_23250 SM00363 S4 RNA-binding domain AOQ81_23260 SM00463 Small MutS-related domain AOQ81_23260 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AOQ81_23260 SM00534 ATPase domain of DNA mismatch repair MUTS family AOQ81_23265 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AOQ81_23265 SM00481 DNA polymerase alpha chain like domain AOQ81_23265 SM00483 DNA polymerase X family AOQ81_23305 SM00873 B3/4 domain AOQ81_23305 SM00874 tRNA synthetase B5 domain AOQ81_23305 SM00896 Ferredoxin-fold anticodon binding domain AOQ81_23315 SM00967 RNA 2'-O ribose methyltransferase substrate binding AOQ81_23390 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AOQ81_23400 SM00382 ATPases associated with a variety of cellular activities AOQ81_23420 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AOQ81_23435 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AOQ81_23435 SM01232 AOQ81_23435 AOQ81_23440 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AOQ81_23440 SM00474 3'-5' exonuclease AOQ81_23440 SM00475 5'-3' exonuclease AOQ81_23440 SM00482 DNA polymerase A domain AOQ81_23445 SM00091 PAS domain AOQ81_23445 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ81_23445 SM00387 Histidine kinase-like ATPases AOQ81_23445 SM00388 His Kinase A (phosphoacceptor) domain AOQ81_23450 SM00448 cheY-homologous receiver domain AOQ81_23450 SM00862 Transcriptional regulatory protein, C terminal AOQ81_23470 SM01329 AOQ81_23470 AOQ81_23520 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOQ81_23525 SM00919 Malic enzyme, NAD binding domain AOQ81_23525 SM01274 AOQ81_23525 AOQ81_23530 SM00481 DNA polymerase alpha chain like domain AOQ81_23565 SM00116 Domain in cystathionine beta-synthase and other proteins. AOQ81_23575 SM00849 Metallo-beta-lactamase superfamily AOQ81_23630 SM00530 Helix-turn-helix XRE-family like proteins AOQ81_23640 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AOQ81_23640 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AOQ81_23760 SM00981 AOQ81_23760 AOQ81_23800 SM00363 S4 RNA-binding domain AOQ81_23800 SM01390 AOQ81_23800 AOQ81_23815 SM00363 S4 RNA-binding domain AOQ81_23845 SM00116 Domain in cystathionine beta-synthase and other proteins. AOQ81_23860 SM00448 cheY-homologous receiver domain AOQ81_23860 SM00862 Transcriptional regulatory protein, C terminal AOQ81_23865 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ81_23865 SM00387 Histidine kinase-like ATPases AOQ81_23865 SM00388 His Kinase A (phosphoacceptor) domain AOQ81_23870 SM00248 ankyrin repeats AOQ81_23905 SM00354 helix_turn _helix lactose operon repressor AOQ81_23965 SM00843 AOQ81_23965 AOQ81_24005 SM00849 Metallo-beta-lactamase superfamily AOQ81_24025 SM00642 Alpha-amylase domain AOQ81_24050 SM00420 helix_turn_helix, Deoxyribose operon repressor AOQ81_24055 SM00363 S4 RNA-binding domain AOQ81_24075 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOQ81_24100 SM01058 CarD-like/TRCF domain AOQ81_24135 SM00852 Probable molybdopterin binding domain AOQ81_24170 SM00450 Rhodanese Homology Domain AOQ81_24250 SM00382 ATPases associated with a variety of cellular activities AOQ81_24270 SM00729 Elongator protein 3, MiaB family, Radical SAM AOQ81_24280 SM00382 ATPases associated with a variety of cellular activities AOQ81_24320 SM00014 Acid phosphatase homologues AOQ81_24335 SM00852 Probable molybdopterin binding domain AOQ81_24395 SM00387 Histidine kinase-like ATPases AOQ81_24400 SM00387 Histidine kinase-like ATPases AOQ81_24400 SM00388 His Kinase A (phosphoacceptor) domain AOQ81_24430 SM00382 ATPases associated with a variety of cellular activities AOQ81_24485 SM01234 AOQ81_24485 AOQ81_24490 SM00947 Carbonic anhydrase AOQ81_24510 SM00894 Excalibur calcium-binding domain AOQ81_24570 SM00899 AOQ81_24570 AOQ81_24580 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ81_24580 SM00387 Histidine kinase-like ATPases AOQ81_24580 SM00388 His Kinase A (phosphoacceptor) domain AOQ81_24585 SM00448 cheY-homologous receiver domain AOQ81_24585 SM00862 Transcriptional regulatory protein, C terminal AOQ81_24615 SM00046 Diacylglycerol kinase catalytic domain (presumed) AOQ81_24665 SM00382 ATPases associated with a variety of cellular activities AOQ81_24670 SM00342 helix_turn_helix, arabinose operon control protein AOQ81_24670 SM00871 Bacterial transcription activator, effector binding domain AOQ81_24675 SM00448 cheY-homologous receiver domain AOQ81_24675 SM00862 Transcriptional regulatory protein, C terminal AOQ81_24680 SM00387 Histidine kinase-like ATPases AOQ81_24705 SM00382 ATPases associated with a variety of cellular activities AOQ81_24725 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOQ81_24725 SM00866 AOQ81_24725 AOQ81_24765 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ81_24765 SM00387 Histidine kinase-like ATPases AOQ81_24765 SM00388 His Kinase A (phosphoacceptor) domain AOQ81_24770 SM00448 cheY-homologous receiver domain AOQ81_24770 SM00862 Transcriptional regulatory protein, C terminal AOQ81_24775 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AOQ81_24815 SM00357 Cold shock protein domain AOQ81_24855 SM00642 Alpha-amylase domain AOQ81_25020 SM00316 Ribosomal protein S1-like RNA-binding domain AOQ81_25030 SM00344 helix_turn_helix ASNC type AOQ81_25065 SM01298 AOQ81_25065 AOQ81_25070 SM00479 AOQ81_25070 AOQ81_25165 SM00871 Bacterial transcription activator, effector binding domain AOQ81_25225 SM00382 ATPases associated with a variety of cellular activities AOQ81_25250 SM00860 SMI1 / KNR4 family AOQ81_25320 SM00420 helix_turn_helix, Deoxyribose operon repressor AOQ81_25360 SM00422 helix_turn_helix, mercury resistance AOQ81_25375 SM00855 Phosphoglycerate mutase family AOQ81_25385 SM00729 Elongator protein 3, MiaB family, Radical SAM AOQ81_25450 SM00382 ATPases associated with a variety of cellular activities AOQ81_25470 SM00382 ATPases associated with a variety of cellular activities AOQ81_25470 SM00930 AOQ81_25470 AOQ81_25490 SM00493 AOQ81_25490 AOQ81_25575 SM00849 Metallo-beta-lactamase superfamily AOQ81_25625 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOQ81_25625 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ81_25695 SM00530 Helix-turn-helix XRE-family like proteins AOQ81_25720 SM00448 cheY-homologous receiver domain AOQ81_25720 SM00862 Transcriptional regulatory protein, C terminal AOQ81_25725 SM00387 Histidine kinase-like ATPases AOQ81_25725 SM00388 His Kinase A (phosphoacceptor) domain AOQ81_25745 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOQ81_25745 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ81_25765 SM00347 helix_turn_helix multiple antibiotic resistance protein AOQ81_25895 SM00363 S4 RNA-binding domain AOQ81_25905 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain AOQ81_25910 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOQ81_25960 SM00382 ATPases associated with a variety of cellular activities AOQ81_25980 SM00448 cheY-homologous receiver domain AOQ81_25980 SM00862 Transcriptional regulatory protein, C terminal AOQ81_25990 SM00316 Ribosomal protein S1-like RNA-binding domain AOQ81_25990 SM00357 Cold shock protein domain AOQ81_25990 SM00955 AOQ81_25990 AOQ81_26100 SM00507 HNH nucleases AOQ81_26135 SM01192 AOQ81_26135 AOQ81_26135 SM01193 AOQ81_26135 AOQ81_26155 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AOQ81_26255 SM00028 Tetratricopeptide repeats AOQ81_26295 SM00487 DEAD-like helicases superfamily AOQ81_26295 SM00490 helicase superfamily c-terminal domain AOQ81_26315 SM00422 helix_turn_helix, mercury resistance AOQ81_26335 SM00530 Helix-turn-helix XRE-family like proteins AOQ81_26350 SM00422 helix_turn_helix, mercury resistance AOQ81_26360 SM00382 ATPases associated with a variety of cellular activities AOQ81_26370 SM00382 ATPases associated with a variety of cellular activities AOQ81_26380 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AOQ81_26380 SM00245 tail specific protease AOQ81_26390 SM00382 ATPases associated with a variety of cellular activities AOQ81_26405 SM00937 AOQ81_26405 AOQ81_26410 SM00957 SecA DEAD-like domain AOQ81_26410 SM00958 SecA preprotein cross-linking domain AOQ81_26420 SM00357 Cold shock protein domain AOQ81_26430 SM00487 DEAD-like helicases superfamily AOQ81_26430 SM00490 helicase superfamily c-terminal domain AOQ81_26470 SM00984 UDP binding domain AOQ81_26485 SM00382 ATPases associated with a variety of cellular activities AOQ81_26490 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. AOQ81_26675 SM00287 Bacterial SH3 domain homologues AOQ81_26705 SM00487 DEAD-like helicases superfamily AOQ81_26705 SM00490 helicase superfamily c-terminal domain AOQ81_26750 SM00382 ATPases associated with a variety of cellular activities AOQ81_26760 SM00530 Helix-turn-helix XRE-family like proteins AOQ81_26785 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ81_26785 SM00387 Histidine kinase-like ATPases AOQ81_26785 SM00388 His Kinase A (phosphoacceptor) domain AOQ81_26790 SM00448 cheY-homologous receiver domain AOQ81_26790 SM00862 Transcriptional regulatory protein, C terminal AOQ81_26815 SM00287 Bacterial SH3 domain homologues AOQ81_26815 SM00382 ATPases associated with a variety of cellular activities AOQ81_26825 SM00984 UDP binding domain AOQ81_26895 SM00382 ATPases associated with a variety of cellular activities AOQ81_26900 SM00850 LytTr DNA-binding domain AOQ81_26985 SM00052 Putative diguanylate phosphodiesterase AOQ81_26985 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AOQ81_26985 SM00091 PAS domain AOQ81_26985 SM00267 diguanylate cyclase AOQ81_27005 SM00382 ATPases associated with a variety of cellular activities AOQ81_27075 SM00226 Low molecular weight phosphatase family AOQ81_27090 SM00903 Flavin reductase like domain AOQ81_27125 SM00937 AOQ81_27125 AOQ81_27140 SM00357 Cold shock protein domain AOQ81_27140 SM00382 ATPases associated with a variety of cellular activities AOQ81_27140 SM00959 Rho termination factor, N-terminal domain AOQ81_27160 SM00448 cheY-homologous receiver domain AOQ81_27210 SM00155 Phospholipase D. Active site motifs. AOQ81_27220 SM00052 Putative diguanylate phosphodiesterase AOQ81_27220 SM00267 diguanylate cyclase AOQ81_27230 SM00530 Helix-turn-helix XRE-family like proteins AOQ81_27235 SM00421 helix_turn_helix, Lux Regulon AOQ81_27235 SM00448 cheY-homologous receiver domain AOQ81_27240 SM00387 Histidine kinase-like ATPases AOQ81_27250 SM00382 ATPases associated with a variety of cellular activities AOQ81_27300 SM00836 DALR anticodon binding domain AOQ81_27300 SM01016 Arginyl tRNA synthetase N terminal dom AOQ81_27345 SM00422 helix_turn_helix, mercury resistance AOQ81_27375 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOQ81_27385 SM00382 ATPases associated with a variety of cellular activities AOQ81_27435 SM00936 Penicillin-binding protein 5, C-terminal domain AOQ81_27480 SM00986 Uracil DNA glycosylase superfamily AOQ81_27480 SM00987 UreE urease accessory protein, C-terminal domain AOQ81_27490 SM00382 ATPases associated with a variety of cellular activities AOQ81_27500 SM00354 helix_turn _helix lactose operon repressor AOQ81_27535 SM00100 Cyclic nucleotide-monophosphate binding domain AOQ81_27545 SM00421 helix_turn_helix, Lux Regulon AOQ81_27545 SM00448 cheY-homologous receiver domain AOQ81_27560 SM00267 diguanylate cyclase AOQ81_27575 SM00448 cheY-homologous receiver domain AOQ81_27575 SM00850 LytTr DNA-binding domain AOQ81_27605 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOQ81_27630 SM00382 ATPases associated with a variety of cellular activities AOQ81_27695 SM00448 cheY-homologous receiver domain AOQ81_27695 SM00850 LytTr DNA-binding domain AOQ81_27700 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AOQ81_27700 SM00387 Histidine kinase-like ATPases AOQ81_27755 SM00487 DEAD-like helicases superfamily AOQ81_27755 SM00490 helicase superfamily c-terminal domain AOQ81_27765 SM01240 AOQ81_27765 AOQ81_27790 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AOQ81_27795 SM00849 Metallo-beta-lactamase superfamily AOQ81_27810 SM00091 PAS domain AOQ81_27810 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOQ81_27810 SM00387 Histidine kinase-like ATPases AOQ81_27810 SM00388 His Kinase A (phosphoacceptor) domain AOQ81_27815 SM00448 cheY-homologous receiver domain AOQ81_27815 SM00862 Transcriptional regulatory protein, C terminal AOQ81_27840 SM00788 Adenylosuccinate synthetase AOQ81_27855 SM00267 diguanylate cyclase AOQ81_27900 SM00470 ParB-like nuclease domain AOQ81_27910 SM00470 ParB-like nuclease domain AOQ81_27920 SM01228 AOQ81_27920 AOQ81_27930 SM00393 Putative single-stranded nucleic acids-binding domain AOQ81_27930 SM01245 AOQ81_27930