locus-tag class description KM393_00005 PF00308 Bacterial dnaA protein KM393_00005 PF08299 Bacterial dnaA protein helix-turn-helix KM393_00005 PF11638 DnaA N-terminal domain KM393_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain KM393_00010 PF02767 DNA polymerase III beta subunit, central domain KM393_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain KM393_00020 PF02463 RecF/RecN/SMC N terminal domain KM393_00025 PF01751 Toprim domain KM393_00025 PF00986 DNA gyrase B subunit, carboxyl terminus KM393_00025 PF00204 DNA gyrase B KM393_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_00030 PF03989 DNA gyrase C-terminal domain, beta-propeller KM393_00030 PF00521 DNA gyrase/topoisomerase IV, subunit A KM393_00060 PF14175 YaaC-like Protein KM393_00065 PF00571 CBS domain KM393_00065 PF00478 IMP dehydrogenase / GMP reductase domain KM393_00070 PF07943 Penicillin-binding protein 5, C-terminal domain KM393_00070 PF00768 D-alanyl-D-alanine carboxypeptidase KM393_00075 PF01680 SOR/SNZ family KM393_00080 PF01174 SNO glutamine amidotransferase family KM393_00085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM393_00085 PF02403 Seryl-tRNA synthetase N-terminal domain KM393_00100 PF01712 Deoxynucleoside kinase KM393_00105 PF01712 Deoxynucleoside kinase KM393_00110 PF00857 Isochorismatase family KM393_00115 PF14437 MafB19-like deaminase KM393_00125 PF12169 DNA polymerase III subunits gamma and tau domain III KM393_00130 PF02575 YbaB/EbfC DNA-binding family KM393_00135 PF02132 RecR protein KM393_00135 PF13662 Toprim domain KM393_00140 PF10704 Protein of unknown function (DUF2508) KM393_00145 PF07441 SigmaK-factor processing regulatory protein BofA KM393_00180 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KM393_00180 PF01276 Orn/Lys/Arg decarboxylase, major domain KM393_00185 PF02223 Thymidylate kinase KM393_00190 PF09115 DNA polymerase III, delta subunit, C terminal KM393_00195 PF04468 PSP1 C-terminal conserved region KM393_00200 PF06156 Initiation control protein YabA KM393_00205 PF05175 Methyltransferase small domain KM393_00210 PF01541 GIY-YIG catalytic domain KM393_00215 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM393_00220 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KM393_00220 PF18277 AbrB C-terminal domain KM393_00225 PF01588 Putative tRNA binding domain KM393_00225 PF09334 tRNA synthetases class I (M) KM393_00225 PF08264 Anticodon-binding domain of tRNA KM393_00230 PF01026 TatD related DNase KM393_00235 PF13662 Toprim domain KM393_00235 PF13331 Domain of unknown function (DUF4093) KM393_00240 PF00398 Ribosomal RNA adenine dimethylase KM393_00245 PF05582 YabG peptidase U57 KM393_00250 PF06257 Biofilm formation stimulator VEG KM393_00255 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM393_00260 PF00288 GHMP kinases N terminal domain KM393_00260 PF08544 GHMP kinases C terminal KM393_00265 PF09182 Bacterial purine repressor, N-terminal KM393_00265 PF00156 Phosphoribosyl transferase domain KM393_00270 PF01042 Endoribonuclease L-PSP KM393_00275 PF04026 SpoVG KM393_00280 PF00483 Nucleotidyl transferase KM393_00280 PF00132 Bacterial transferase hexapeptide (six repeats) KM393_00285 PF14572 Phosphoribosyl synthetase-associated domain KM393_00285 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KM393_00290 PF01195 Peptidyl-tRNA hydrolase KM393_00300 PF17757 UvrB interaction domain KM393_00300 PF03461 TRCF domain KM393_00300 PF00270 DEAD/DEAH box helicase KM393_00300 PF02559 CarD-like/TRCF domain KM393_00300 PF00271 Helicase conserved C-terminal domain KM393_00305 PF15714 Stage V sporulation protein T C-terminal, transcription factor KM393_00305 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KM393_00310 PF14667 Polysaccharide biosynthesis C-terminal domain KM393_00310 PF01943 Polysaccharide biosynthesis protein KM393_00315 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM393_00315 PF03819 MazG nucleotide pyrophosphohydrolase domain KM393_00320 PF01479 S4 domain KM393_00325 PF07873 YabP family KM393_00330 PF09578 Spore cortex protein YabQ (Spore_YabQ) KM393_00340 PF00575 S1 RNA binding domain KM393_00355 PF07228 Stage II sporulation protein E (SpoIIE) KM393_00360 PF11734 TilS substrate C-terminal domain KM393_00360 PF01171 PP-loop family KM393_00360 PF09179 TilS substrate binding domain KM393_00365 PF00156 Phosphoribosyl transferase domain KM393_00370 PF17862 AAA+ lid domain KM393_00370 PF06480 FtsH Extracellular KM393_00370 PF01434 Peptidase family M41 KM393_00370 PF00004 ATPase family associated with various cellular activities (AAA) KM393_00375 PF03309 Type III pantothenate kinase KM393_00380 PF01430 Hsp33 protein KM393_00385 PF00291 Pyridoxal-phosphate dependent enzyme KM393_00390 PF04715 Anthranilate synthase component I, N terminal region KM393_00390 PF00425 chorismate binding enzyme KM393_00395 PF00117 Glutamine amidotransferase class-I KM393_00400 PF01063 Amino-transferase class IV KM393_00405 PF00809 Pterin binding enzyme KM393_00410 PF02152 Dihydroneopterin aldolase KM393_00415 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KM393_00420 PF01381 Helix-turn-helix KM393_00425 PF01207 Dihydrouridine synthase (Dus) KM393_00430 PF01336 OB-fold nucleic acid binding domain KM393_00430 PF00152 tRNA synthetases class II (D, K and N) KM393_00450 PF17727 CtsR C-terminal dimerization domain KM393_00450 PF05848 CtsR N-terminal HTH domain KM393_00455 PF02151 UvrB/uvrC motif KM393_00460 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain KM393_00465 PF00004 ATPase family associated with various cellular activities (AAA) KM393_00465 PF10431 C-terminal, D2-small domain, of ClpB protein KM393_00465 PF02861 Clp amino terminal domain, pathogenicity island component KM393_00465 PF17871 AAA lid domain KM393_00465 PF07724 AAA domain (Cdc48 subfamily) KM393_00470 PF18073 Rubredoxin metal binding domain KM393_00475 PF10635 DisA bacterial checkpoint controller linker region KM393_00475 PF02457 DisA bacterial checkpoint controller nucleotide-binding KM393_00485 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KM393_00490 PF02542 YgbB family KM393_00495 PF00749 tRNA synthetases class I (E and Q), catalytic domain KM393_00500 PF00132 Bacterial transferase hexapeptide (six repeats) KM393_00500 PF06426 Serine acetyltransferase, N-terminal KM393_00505 PF01406 tRNA synthetases class I (C) catalytic domain KM393_00505 PF09190 DALR domain KM393_00510 PF00636 Ribonuclease III domain KM393_00515 PF08032 RNA 2'-O ribose methyltransferase substrate binding KM393_00515 PF00588 SpoU rRNA Methylase family KM393_00520 PF05991 YacP-like NYN domain KM393_00525 PF08281 Sigma-70, region 4 KM393_00525 PF04542 Sigma-70 region 2 KM393_00530 PF00471 Ribosomal protein L33 KM393_00535 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KM393_00540 PF02357 Transcription termination factor nusG KM393_00540 PF00467 KOW motif KM393_00545 PF00298 Ribosomal protein L11, RNA binding domain KM393_00545 PF03946 Ribosomal protein L11, N-terminal domain KM393_00550 PF00687 Ribosomal protein L1p/L10e family KM393_00555 PF00466 Ribosomal protein L10 KM393_00560 PF16320 Ribosomal protein L7/L12 dimerisation domain KM393_00560 PF00542 Ribosomal protein L7/L12 C-terminal domain KM393_00565 PF05175 Methyltransferase small domain KM393_00570 PF04561 RNA polymerase Rpb2, domain 2 KM393_00570 PF04563 RNA polymerase beta subunit KM393_00570 PF04560 RNA polymerase Rpb2, domain 7 KM393_00570 PF04565 RNA polymerase Rpb2, domain 3 KM393_00570 PF00562 RNA polymerase Rpb2, domain 6 KM393_00570 PF10385 RNA polymerase beta subunit external 1 domain KM393_00575 PF04998 RNA polymerase Rpb1, domain 5 KM393_00575 PF05000 RNA polymerase Rpb1, domain 4 KM393_00575 PF04983 RNA polymerase Rpb1, domain 3 KM393_00575 PF00623 RNA polymerase Rpb1, domain 2 KM393_00575 PF04997 RNA polymerase Rpb1, domain 1 KM393_00580 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family KM393_00585 PF00164 Ribosomal protein S12/S23 KM393_00590 PF00177 Ribosomal protein S7p/S5e KM393_00595 PF03764 Elongation factor G, domain IV KM393_00595 PF03144 Elongation factor Tu domain 2 KM393_00595 PF00679 Elongation factor G C-terminus KM393_00595 PF14492 Elongation Factor G, domain II KM393_00595 PF00009 Elongation factor Tu GTP binding domain KM393_00600 PF03143 Elongation factor Tu C-terminal domain KM393_00600 PF03144 Elongation factor Tu domain 2 KM393_00600 PF00009 Elongation factor Tu GTP binding domain KM393_00605 PF00338 Ribosomal protein S10p/S20e KM393_00610 PF00297 Ribosomal protein L3 KM393_00615 PF00573 Ribosomal protein L4/L1 family KM393_00620 PF00276 Ribosomal protein L23 KM393_00625 PF03947 Ribosomal Proteins L2, C-terminal domain KM393_00625 PF00181 Ribosomal Proteins L2, RNA binding domain KM393_00630 PF00203 Ribosomal protein S19 KM393_00635 PF00237 Ribosomal protein L22p/L17e KM393_00640 PF07650 KH domain KM393_00640 PF00189 Ribosomal protein S3, C-terminal domain KM393_00645 PF00252 Ribosomal protein L16p/L10e KM393_00650 PF00831 Ribosomal L29 protein KM393_00655 PF00366 Ribosomal protein S17 KM393_00660 PF00238 Ribosomal protein L14p/L23e KM393_00665 PF00467 KOW motif KM393_00665 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KM393_00670 PF00281 Ribosomal protein L5 KM393_00670 PF00673 ribosomal L5P family C-terminus KM393_00675 PF00253 Ribosomal protein S14p/S29e KM393_00680 PF00410 Ribosomal protein S8 KM393_00685 PF00347 Ribosomal protein L6 KM393_00690 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KM393_00695 PF03719 Ribosomal protein S5, C-terminal domain KM393_00695 PF00333 Ribosomal protein S5, N-terminal domain KM393_00700 PF00327 Ribosomal protein L30p/L7e KM393_00705 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KM393_00710 PF00344 SecY translocase KM393_00715 PF05191 Adenylate kinase, active site lid KM393_00720 PF00557 Metallopeptidase family M24 KM393_00725 PF01176 Translation initiation factor 1A / IF-1 KM393_00730 PF00444 Ribosomal protein L36 KM393_00735 PF00416 Ribosomal protein S13/S18 KM393_00740 PF00411 Ribosomal protein S11 KM393_00745 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KM393_00745 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KM393_00745 PF01000 RNA polymerase Rpb3/RpoA insert domain KM393_00750 PF01196 Ribosomal protein L17 KM393_00755 PF00005 ABC transporter KM393_00760 PF00005 ABC transporter KM393_00765 PF02361 Cobalt transport protein KM393_00770 PF01416 tRNA pseudouridine synthase KM393_00775 PF00572 Ribosomal protein L13 KM393_00780 PF00380 Ribosomal protein S9/S16 KM393_00790 PF01520 N-acetylmuramoyl-L-alanine amidase KM393_00795 PF10609 NUBPL iron-transfer P-loop NTPase KM393_00800 PF17898 Spore germination GerD central core domain KM393_00805 PF14089 KinB-signalling pathway activation in sporulation KM393_00810 PF01522 Polysaccharide deacetylase KM393_00885 PF00491 Arginase family KM393_00890 PF02457 DisA bacterial checkpoint controller nucleotide-binding KM393_00895 PF07949 YbbR-like protein KM393_00900 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KM393_00900 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KM393_00900 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KM393_00900 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KM393_00910 PF01380 SIS domain KM393_00915 PF00561 alpha/beta hydrolase fold KM393_00920 PF07729 FCD domain KM393_00920 PF00392 Bacterial regulatory proteins, gntR family KM393_00930 PF02447 GntP family permease KM393_00935 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM393_00935 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain KM393_00940 PF00326 Prolyl oligopeptidase family KM393_00940 PF07676 WD40-like Beta Propeller Repeat KM393_00975 PF00528 Binding-protein-dependent transport system inner membrane component KM393_00980 PF09383 NIL domain KM393_00980 PF00005 ABC transporter KM393_00985 PF03180 NLPA lipoprotein KM393_00990 PF08240 Alcohol dehydrogenase GroES-like domain KM393_00990 PF00107 Zinc-binding dehydrogenase KM393_01000 PF01565 FAD binding domain KM393_01005 PF07690 Major Facilitator Superfamily KM393_01015 PF07690 Major Facilitator Superfamily KM393_01030 PF00528 Binding-protein-dependent transport system inner membrane component KM393_01035 PF00528 Binding-protein-dependent transport system inner membrane component KM393_01035 PF12911 N-terminal TM domain of oligopeptide transport permease C KM393_01040 PF00005 ABC transporter KM393_01040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM393_01045 PF00005 ABC transporter KM393_01045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM393_01050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM393_01060 PF12833 Helix-turn-helix domain KM393_01075 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM393_01080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM393_01085 PF00248 Aldo/keto reductase family KM393_01090 PF03807 NADP oxidoreductase coenzyme F420-dependent KM393_01090 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM393_01095 PF04973 Nicotinamide mononucleotide transporter KM393_01100 PF06800 Sugar transport protein KM393_01105 PF00528 Binding-protein-dependent transport system inner membrane component KM393_01115 PF12728 Helix-turn-helix domain KM393_01115 PF12727 PBP superfamily domain KM393_01125 PF03466 LysR substrate binding domain KM393_01125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM393_01130 PF00892 EamA-like transporter family KM393_01135 PF14142 YrzO-like protein KM393_01145 PF01553 Acyltransferase KM393_01155 PF00356 Bacterial regulatory proteins, lacI family KM393_01155 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KM393_01165 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM393_01165 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM393_01175 PF01026 TatD related DNase KM393_01180 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) KM393_01205 PF00005 ABC transporter KM393_01205 PF16326 ABC transporter C-terminal domain KM393_01205 PF12848 ABC transporter KM393_01220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM393_01225 PF00528 Binding-protein-dependent transport system inner membrane component KM393_01230 PF00528 Binding-protein-dependent transport system inner membrane component KM393_01230 PF12911 N-terminal TM domain of oligopeptide transport permease C KM393_01235 PF00005 ABC transporter KM393_01235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM393_01240 PF00005 ABC transporter KM393_01240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM393_01285 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM393_01290 PF01557 Fumarylacetoacetate (FAA) hydrolase family KM393_01300 PF07690 Major Facilitator Superfamily KM393_01310 PF01225 Mur ligase family, catalytic domain KM393_01310 PF08245 Mur ligase middle domain KM393_01310 PF02875 Mur ligase family, glutamate ligase domain KM393_01315 PF00271 Helicase conserved C-terminal domain KM393_01315 PF00270 DEAD/DEAH box helicase KM393_01320 PF03851 UV-endonuclease UvdE KM393_01325 PF01694 Rhomboid family KM393_01330 PF01648 4'-phosphopantetheinyl transferase superfamily KM393_01340 PF00842 Alanine racemase, C-terminal domain KM393_01340 PF01168 Alanine racemase, N-terminal domain KM393_01345 PF01402 Ribbon-helix-helix protein, copG family KM393_01350 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system KM393_01355 PF09371 Tex-like protein N-terminal domain KM393_01355 PF00575 S1 RNA binding domain KM393_01355 PF16921 Tex protein YqgF-like domain KM393_01355 PF17674 HHH domain KM393_01365 PF17283 SprT-like zinc ribbon domain KM393_01365 PF10263 SprT-like family KM393_01450 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KM393_01455 PF00814 Glycoprotease family KM393_01460 PF00583 Acetyltransferase (GNAT) family KM393_01465 PF00814 Glycoprotease family KM393_01470 PF00005 ABC transporter KM393_01470 PF16326 ABC transporter C-terminal domain KM393_01470 PF12848 ABC transporter KM393_01475 PF06971 Putative DNA-binding protein N-terminus KM393_01475 PF02629 CoA binding domain KM393_01485 PF02517 CPBP intramembrane metalloprotease KM393_01490 PF00166 Chaperonin 10 Kd subunit KM393_01495 PF00118 TCP-1/cpn60 chaperonin family KM393_01500 PF02540 NAD synthase KM393_01500 PF00958 GMP synthase C terminal domain KM393_01500 PF00117 Glutamine amidotransferase class-I KM393_01505 PF00860 Permease family KM393_01510 PF00486 Transcriptional regulatory protein, C terminal KM393_01510 PF00072 Response regulator receiver domain KM393_01515 PF16736 Single Cache-like KM393_01515 PF00989 PAS fold KM393_01515 PF00512 His Kinase A (phospho-acceptor) domain KM393_01515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_01545 PF08241 Methyltransferase domain KM393_01585 PF02673 Bacitracin resistance protein BacA KM393_01595 PF00005 ABC transporter KM393_01600 PF00512 His Kinase A (phospho-acceptor) domain KM393_01600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_01605 PF00486 Transcriptional regulatory protein, C terminal KM393_01605 PF00072 Response regulator receiver domain KM393_01625 PF00731 AIR carboxylase KM393_01630 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KM393_01630 PF02222 ATP-grasp domain KM393_01635 PF10397 Adenylosuccinate lyase C-terminus KM393_01635 PF00206 Lyase KM393_01640 PF01259 SAICAR synthetase KM393_01645 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase KM393_01655 PF00586 AIR synthase related protein, N-terminal domain KM393_01655 PF02769 AIR synthase related protein, C-terminal domain KM393_01655 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KM393_01660 PF00156 Phosphoribosyl transferase domain KM393_01665 PF02769 AIR synthase related protein, C-terminal domain KM393_01665 PF00586 AIR synthase related protein, N-terminal domain KM393_01670 PF00551 Formyl transferase KM393_01675 PF01808 AICARFT/IMPCHase bienzyme KM393_01675 PF02142 MGS-like domain KM393_01680 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KM393_01680 PF02843 Phosphoribosylglycinamide synthetase, C domain KM393_01680 PF02844 Phosphoribosylglycinamide synthetase, N domain KM393_01700 PF01884 PcrB family KM393_01705 PF00580 UvrD/REP helicase N-terminal domain KM393_01705 PF13361 UvrD-like helicase C-terminal domain KM393_01710 PF03120 NAD-dependent DNA ligase OB-fold domain KM393_01710 PF12826 Helix-hairpin-helix motif KM393_01710 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KM393_01710 PF00533 BRCA1 C Terminus (BRCT) domain KM393_01710 PF01653 NAD-dependent DNA ligase adenylation domain KM393_01715 PF07537 CamS sex pheromone cAM373 precursor KM393_01720 PF01925 Sulfite exporter TauE/SafE KM393_01725 PF00171 Aldehyde dehydrogenase family KM393_01735 PF00857 Isochorismatase family KM393_01740 PF00005 ABC transporter KM393_01740 PF09383 NIL domain KM393_01745 PF00528 Binding-protein-dependent transport system inner membrane component KM393_01750 PF03180 NLPA lipoprotein KM393_01770 PF01047 MarR family KM393_01780 PF02686 Glu-tRNAGln amidotransferase C subunit KM393_01785 PF01425 Amidase KM393_01790 PF02637 GatB domain KM393_01790 PF02934 GatB/GatE catalytic domain KM393_01795 PF00781 Diacylglycerol kinase catalytic domain KM393_01800 PF13419 Haloacid dehalogenase-like hydrolase KM393_01805 PF00202 Aminotransferase class-III KM393_01810 PF00158 Sigma-54 interaction domain KM393_01815 PF00171 Aldehyde dehydrogenase family KM393_01820 PF00893 Small Multidrug Resistance protein KM393_01825 PF02073 Thermophilic metalloprotease (M29) KM393_01840 PF07670 Nucleoside recognition KM393_01840 PF07662 Na+ dependent nucleoside transporter C-terminus KM393_01840 PF01773 Na+ dependent nucleoside transporter N-terminus KM393_01845 PF02475 Met-10+ like-protein KM393_01845 PF01938 TRAM domain KM393_01845 PF05958 tRNA (Uracil-5-)-methyltransferase KM393_01850 PF01207 Dihydrouridine synthase (Dus) KM393_01860 PF07308 Protein of unknown function (DUF1456) KM393_01875 PF13378 Enolase C-terminal domain-like KM393_01875 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KM393_01885 PF03553 Na+/H+ antiporter family KM393_01890 PF07687 Peptidase dimerisation domain KM393_01890 PF01546 Peptidase family M20/M25/M40 KM393_01900 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM393_01900 PF13192 Thioredoxin domain KM393_01905 PF00578 AhpC/TSA family KM393_01910 PF01636 Phosphotransferase enzyme family KM393_01915 PF01008 Initiation factor 2 subunit family KM393_01920 PF00596 Class II Aldolase and Adducin N-terminal domain KM393_01925 PF01032 FecCD transport family KM393_01930 PF01032 FecCD transport family KM393_01935 PF01497 Periplasmic binding protein KM393_01940 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM393_01950 PF12728 Helix-turn-helix domain KM393_01985 PF00512 His Kinase A (phospho-acceptor) domain KM393_01985 PF00989 PAS fold KM393_01985 PF13188 PAS domain KM393_01985 PF13426 PAS domain KM393_01985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_02005 PF10127 RNA repair pathway DNA polymerase beta family KM393_02010 PF07690 Major Facilitator Superfamily KM393_02015 PF01266 FAD dependent oxidoreductase KM393_02015 PF00355 Rieske [2Fe-2S] domain KM393_02025 PF00528 Binding-protein-dependent transport system inner membrane component KM393_02030 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM393_02035 PF00005 ABC transporter KM393_02040 PF00672 HAMP domain KM393_02040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM393_02040 PF12729 Four helix bundle sensory module for signal transduction KM393_02045 PF12729 Four helix bundle sensory module for signal transduction KM393_02045 PF00672 HAMP domain KM393_02045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM393_02050 PF16657 Maltogenic Amylase, C-terminal domain KM393_02050 PF00128 Alpha amylase, catalytic domain KM393_02055 PF00367 phosphotransferase system, EIIB KM393_02055 PF02378 Phosphotransferase system, EIIC KM393_02055 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KM393_02060 PF03372 Endonuclease/Exonuclease/phosphatase family KM393_02065 PF01061 ABC-2 type transporter KM393_02070 PF01131 DNA topoisomerase KM393_02070 PF01751 Toprim domain KM393_02075 PF02110 Hydroxyethylthiazole kinase family KM393_02080 PF02581 Thiamine monophosphate synthase KM393_02085 PF03605 Anaerobic c4-dicarboxylate membrane transporter KM393_02090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM393_02090 PF00672 HAMP domain KM393_02095 PF01910 Thiamine-binding protein KM393_02100 PF00528 Binding-protein-dependent transport system inner membrane component KM393_02110 PF00005 ABC transporter KM393_02115 PF00005 ABC transporter KM393_02115 PF12848 ABC transporter KM393_02120 PF00704 Glycosyl hydrolases family 18 KM393_02120 PF00041 Fibronectin type III domain KM393_02140 PF08360 QacR-like protein, C-terminal region KM393_02140 PF00440 Bacterial regulatory proteins, tetR family KM393_02160 PF11700 Vacuole effluxer Atg22 like KM393_02175 PF03129 Anticodon binding domain KM393_02175 PF09180 Prolyl-tRNA synthetase, C-terminal KM393_02175 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM393_02185 PF00480 ROK family KM393_02190 PF02342 TerD domain KM393_02195 PF02342 TerD domain KM393_02200 PF02342 TerD domain KM393_02205 PF03741 Integral membrane protein TerC family KM393_02210 PF14266 Putative component of 'biosynthetic module' KM393_02215 PF05816 Toxic anion resistance protein (TelA) KM393_02220 PF00689 Cation transporting ATPase, C-terminus KM393_02220 PF00690 Cation transporter/ATPase, N-terminus KM393_02225 PF06569 Protein of unknown function (DUF1128) KM393_02230 PF01451 Low molecular weight phosphotyrosine protein phosphatase KM393_02240 PF03631 Virulence factor BrkB KM393_02250 PF00892 EamA-like transporter family KM393_02270 PF09335 SNARE associated Golgi protein KM393_02285 PF16242 Pyridoxamine 5'-phosphate oxidase like KM393_02290 PF01699 Sodium/calcium exchanger protein KM393_02295 PF14167 YfkD-like protein KM393_02300 PF04055 Radical SAM superfamily KM393_02300 PF08756 YfkB-like domain KM393_02310 PF05681 Fumarate hydratase (Fumerase) KM393_02310 PF05683 Fumarase C-terminus KM393_02315 PF01522 Polysaccharide deacetylase KM393_02325 PF00730 HhH-GPD superfamily base excision DNA repair protein KM393_02330 PF05958 tRNA (Uracil-5-)-methyltransferase KM393_02330 PF01938 TRAM domain KM393_02335 PF00589 Phage integrase family KM393_02335 PF14659 Phage integrase, N-terminal SAM-like domain KM393_02345 PF01381 Helix-turn-helix KM393_02360 PF01381 Helix-turn-helix KM393_02395 PF07319 Primosomal protein DnaI N-terminus KM393_02395 PF01695 IstB-like ATP binding protein KM393_02615 PF01183 Glycosyl hydrolases family 25 KM393_02625 PF01416 tRNA pseudouridine synthase KM393_02635 PF00158 Sigma-54 interaction domain KM393_02635 PF02954 Bacterial regulatory protein, Fis family KM393_02635 PF13426 PAS domain KM393_02645 PF00324 Amino acid permease KM393_02650 PF01546 Peptidase family M20/M25/M40 KM393_02650 PF07687 Peptidase dimerisation domain KM393_02675 PF04960 Glutaminase KM393_02680 PF00367 phosphotransferase system, EIIB KM393_02680 PF02378 Phosphotransferase system, EIIC KM393_02685 PF00144 Beta-lactamase KM393_02700 PF00535 Glycosyl transferase family 2 KM393_02705 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM393_02705 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM393_02705 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM393_02710 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM393_02710 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM393_02710 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM393_02715 PF02911 Formyl transferase, C-terminal domain KM393_02715 PF01370 NAD dependent epimerase/dehydratase family KM393_02715 PF00551 Formyl transferase KM393_02720 PF00535 Glycosyl transferase family 2 KM393_02730 PF02901 Pyruvate formate lyase-like KM393_02730 PF01228 Glycine radical KM393_02735 PF04055 Radical SAM superfamily KM393_02740 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase KM393_02740 PF04101 Glycosyltransferase family 28 C-terminal domain KM393_02755 PF01979 Amidohydrolase family KM393_02760 PF08338 Domain of unknown function (DUF1731) KM393_02760 PF01370 NAD dependent epimerase/dehydratase family KM393_02765 PF02631 RecX family KM393_02780 PF08176 Small acid-soluble spore protein K family KM393_02785 PF14043 WVELL protein KM393_02790 PF04307 LexA-binding, inner membrane-associated putative hydrolase KM393_02795 PF14815 NUDIX domain KM393_02795 PF00730 HhH-GPD superfamily base excision DNA repair protein KM393_02805 PF04259 Small, acid-soluble spore protein, gamma-type KM393_02810 PF14182 YgaB-like protein KM393_02815 PF04167 Protein of unknown function (DUF402) KM393_02820 PF00664 ABC transporter transmembrane region KM393_02820 PF00005 ABC transporter KM393_02825 PF06081 Aromatic acid exporter family member 1 KM393_02830 PF01645 Conserved region in glutamate synthase KM393_02830 PF00310 Glutamine amidotransferases class-II KM393_02830 PF01493 GXGXG motif KM393_02830 PF04898 Glutamate synthase central domain KM393_02835 PF00202 Aminotransferase class-III KM393_02840 PF00005 ABC transporter KM393_02855 PF07885 Ion channel KM393_02860 PF00578 AhpC/TSA family KM393_02865 PF01475 Ferric uptake regulator family KM393_02870 PF11023 Zinc-ribbon containing domain KM393_02970 PF01709 Transcriptional regulator KM393_02975 PF00293 NUDIX domain KM393_02975 PF13344 Haloacid dehalogenase-like hydrolase KM393_02980 PF00912 Transglycosylase KM393_02980 PF00905 Penicillin binding protein transpeptidase domain KM393_02985 PF13462 Thioredoxin KM393_02995 PF08331 Domain of unknown function (DUF1730) KM393_03000 PF12671 Putative amidase domain KM393_03005 PF00588 SpoU rRNA Methylase family KM393_03010 PF00563 EAL domain KM393_03010 PF03707 Bacterial signalling protein N terminal repeat KM393_03010 PF00990 Diguanylate cyclase, GGDEF domain KM393_03015 PF08298 PrkA AAA domain KM393_03015 PF06798 PrkA serine protein kinase C-terminal domain KM393_03020 PF04285 Protein of unknown function (DUF444) KM393_03035 PF02028 BCCT, betaine/carnitine/choline family transporter KM393_03040 PF18496 Collagenase G catalytic helper subdomain KM393_03040 PF01752 Collagenase KM393_03040 PF08453 Peptidase family M9 N-terminal KM393_03050 PF15975 Flotillin KM393_03050 PF01145 SPFH domain / Band 7 family KM393_03055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM393_03055 PF02743 Cache domain KM393_03055 PF00672 HAMP domain KM393_03060 PF00989 PAS fold KM393_03060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_03060 PF17203 Single cache domain 3 KM393_03060 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KM393_03065 PF00072 Response regulator receiver domain KM393_03065 PF08279 HTH domain KM393_03065 PF12431 Transcriptional regulator KM393_03070 PF03600 Citrate transporter KM393_03090 PF04309 Glycerol-3-phosphate responsive antiterminator KM393_03095 PF00005 ABC transporter KM393_03095 PF17912 MalK OB fold domain KM393_03100 PF00528 Binding-protein-dependent transport system inner membrane component KM393_03105 PF00528 Binding-protein-dependent transport system inner membrane component KM393_03110 PF13416 Bacterial extracellular solute-binding protein KM393_03115 PF00149 Calcineurin-like phosphoesterase KM393_03120 PF00072 Response regulator receiver domain KM393_03120 PF00486 Transcriptional regulatory protein, C terminal KM393_03125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_03125 PF00512 His Kinase A (phospho-acceptor) domain KM393_03135 PF13529 Peptidase_C39 like family KM393_03140 PF00672 HAMP domain KM393_03140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM393_03140 PF02743 Cache domain KM393_03145 PF17203 Single cache domain 3 KM393_03145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_03145 PF00989 PAS fold KM393_03145 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KM393_03150 PF00072 Response regulator receiver domain KM393_03155 PF03390 2-hydroxycarboxylate transporter family KM393_03160 PF03949 Malic enzyme, NAD binding domain KM393_03160 PF00390 Malic enzyme, N-terminal domain KM393_03170 PF00892 EamA-like transporter family KM393_03175 PF00392 Bacterial regulatory proteins, gntR family KM393_03175 PF00155 Aminotransferase class I and II KM393_03185 PF00672 HAMP domain KM393_03185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_03185 PF18698 Histidine kinase sensor domain KM393_03185 PF00989 PAS fold KM393_03185 PF00512 His Kinase A (phospho-acceptor) domain KM393_03190 PF00486 Transcriptional regulatory protein, C terminal KM393_03190 PF00072 Response regulator receiver domain KM393_03195 PF00583 Acetyltransferase (GNAT) family KM393_03195 PF13508 Acetyltransferase (GNAT) domain KM393_03200 PF02634 FdhD/NarQ family KM393_03205 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KM393_03205 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KM393_03205 PF01568 Molydopterin dinucleotide binding domain KM393_03205 PF00384 Molybdopterin oxidoreductase KM393_03205 PF00037 4Fe-4S binding domain KM393_03210 PF07849 Protein of unknown function (DUF1641) KM393_03220 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KM393_03220 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KM393_03225 PF13520 Amino acid permease KM393_03230 PF01022 Bacterial regulatory protein, arsR family KM393_03235 PF00403 Heavy-metal-associated domain KM393_03240 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KM393_03240 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KM393_03240 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain KM393_03255 PF02868 Thermolysin metallopeptidase, alpha-helical domain KM393_03255 PF01447 Thermolysin metallopeptidase, catalytic domain KM393_03255 PF03413 Peptidase propeptide and YPEB domain KM393_03255 PF07504 Fungalysin/Thermolysin Propeptide Motif KM393_03275 PF04294 VanW like protein KM393_03280 PF03816 Cell envelope-related transcriptional attenuator domain KM393_03285 PF07662 Na+ dependent nucleoside transporter C-terminus KM393_03285 PF01773 Na+ dependent nucleoside transporter N-terminus KM393_03290 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM393_03295 PF01595 Cyclin M transmembrane N-terminal domain KM393_03295 PF00571 CBS domain KM393_03295 PF03471 Transporter associated domain KM393_03300 PF10415 Fumarase C C-terminus KM393_03300 PF00206 Lyase KM393_03305 PF02652 L-lactate permease KM393_03310 PF01022 Bacterial regulatory protein, arsR family KM393_03315 PF08141 Small acid-soluble spore protein H family KM393_03320 PF00854 POT family KM393_03325 PF01497 Periplasmic binding protein KM393_03330 PF01032 FecCD transport family KM393_03335 PF01032 FecCD transport family KM393_03340 PF00005 ABC transporter KM393_03345 PF08241 Methyltransferase domain KM393_03350 PF00155 Aminotransferase class I and II KM393_03355 PF01370 NAD dependent epimerase/dehydratase family KM393_03360 PF00293 NUDIX domain KM393_03360 PF13344 Haloacid dehalogenase-like hydrolase KM393_03365 PF00092 von Willebrand factor type A domain KM393_03370 PF07728 AAA domain (dynein-related subfamily) KM393_03375 PF13091 PLD-like domain KM393_03375 PF13396 Phospholipase_D-nuclease N-terminal KM393_03390 PF00563 EAL domain KM393_03390 PF00990 Diguanylate cyclase, GGDEF domain KM393_03390 PF03707 Bacterial signalling protein N terminal repeat KM393_03395 PF13520 Amino acid permease KM393_03400 PF00392 Bacterial regulatory proteins, gntR family KM393_03400 PF07702 UTRA domain KM393_03405 PF00367 phosphotransferase system, EIIB KM393_03405 PF02378 Phosphotransferase system, EIIC KM393_03410 PF00128 Alpha amylase, catalytic domain KM393_03410 PF16657 Maltogenic Amylase, C-terminal domain KM393_03425 PF03323 Bacillus/Clostridium GerA spore germination protein KM393_03435 PF01636 Phosphotransferase enzyme family KM393_03440 PF01235 Sodium:alanine symporter family KM393_03445 PF00005 ABC transporter KM393_03450 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM393_03455 PF00528 Binding-protein-dependent transport system inner membrane component KM393_03460 PF00528 Binding-protein-dependent transport system inner membrane component KM393_03465 PF00324 Amino acid permease KM393_03490 PF08279 HTH domain KM393_03490 PF13280 WYL domain KM393_03495 PF01872 RibD C-terminal domain KM393_03500 PF00989 PAS fold KM393_03500 PF18698 Histidine kinase sensor domain KM393_03500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_03500 PF00672 HAMP domain KM393_03500 PF00512 His Kinase A (phospho-acceptor) domain KM393_03505 PF00486 Transcriptional regulatory protein, C terminal KM393_03505 PF00072 Response regulator receiver domain KM393_03515 PF00916 Sulfate permease family KM393_03515 PF01740 STAS domain KM393_03520 PF00582 Universal stress protein family KM393_03535 PF00528 Binding-protein-dependent transport system inner membrane component KM393_03540 PF00528 Binding-protein-dependent transport system inner membrane component KM393_03545 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM393_03545 PF00005 ABC transporter KM393_03550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM393_03550 PF00005 ABC transporter KM393_03555 PF07690 Major Facilitator Superfamily KM393_03560 PF01047 MarR family KM393_03570 PF00356 Bacterial regulatory proteins, lacI family KM393_03575 PF00294 pfkB family carbohydrate kinase KM393_03580 PF05025 RbsD / FucU transport protein family KM393_03585 PF00005 ABC transporter KM393_03590 PF02653 Branched-chain amino acid transport system / permease component KM393_03595 PF13407 Periplasmic binding protein domain KM393_03600 PF00923 Transaldolase/Fructose-6-phosphate aldolase KM393_03605 PF05547 Immune inhibitor A peptidase M6 KM393_03620 PF08240 Alcohol dehydrogenase GroES-like domain KM393_03620 PF00107 Zinc-binding dehydrogenase KM393_03630 PF00882 Zinc dependent phospholipase C KM393_03635 PF03372 Endonuclease/Exonuclease/phosphatase family KM393_03660 PF02673 Bacitracin resistance protein BacA KM393_03665 PF02743 Cache domain KM393_03665 PF00672 HAMP domain KM393_03665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM393_03670 PF06725 3D domain KM393_03670 PF01476 LysM domain KM393_03675 PF01381 Helix-turn-helix KM393_03685 PF04203 Sortase domain KM393_03690 PF00854 POT family KM393_03695 PF05525 Branched-chain amino acid transport protein KM393_03710 PF00324 Amino acid permease KM393_03715 PF00860 Permease family KM393_03740 PF00999 Sodium/hydrogen exchanger family KM393_03740 PF02080 TrkA-C domain KM393_03740 PF02254 TrkA-N domain KM393_03750 PF00510 Cytochrome c oxidase subunit III KM393_03755 PF00115 Cytochrome C and Quinol oxidase polypeptide I KM393_03760 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KM393_03765 PF00324 Amino acid permease KM393_03770 PF13529 Peptidase_C39 like family KM393_03775 PF01546 Peptidase family M20/M25/M40 KM393_03775 PF07687 Peptidase dimerisation domain KM393_03780 PF11755 Protein of unknown function (DUF3311) KM393_03785 PF00474 Sodium:solute symporter family KM393_03790 PF03323 Bacillus/Clostridium GerA spore germination protein KM393_03795 PF03845 Spore germination protein KM393_03800 PF05504 Spore germination B3/ GerAC like, C-terminal KM393_03805 PF07664 Ferrous iron transport protein B C terminus KM393_03805 PF17910 FeoB cytosolic helical domain KM393_03805 PF02421 Ferrous iron transport protein B KM393_03805 PF07670 Nucleoside recognition KM393_03810 PF02421 Ferrous iron transport protein B KM393_03810 PF07670 Nucleoside recognition KM393_03810 PF07664 Ferrous iron transport protein B C terminus KM393_03810 PF17910 FeoB cytosolic helical domain KM393_03815 PF07670 Nucleoside recognition KM393_03815 PF17910 FeoB cytosolic helical domain KM393_03815 PF07664 Ferrous iron transport protein B C terminus KM393_03815 PF04023 FeoA domain KM393_03815 PF02421 Ferrous iron transport protein B KM393_03820 PF12849 PBP superfamily domain KM393_03825 PF00528 Binding-protein-dependent transport system inner membrane component KM393_03830 PF00528 Binding-protein-dependent transport system inner membrane component KM393_03840 PF00873 AcrB/AcrD/AcrF family KM393_03960 PF00571 CBS domain KM393_03975 PF00246 Zinc carboxypeptidase KM393_03975 PF08239 Bacterial SH3 domain KM393_03980 PF03070 TENA/THI-4/PQQC family KM393_03985 PF00005 ABC transporter KM393_03990 PF00528 Binding-protein-dependent transport system inner membrane component KM393_03995 PF09084 NMT1/THI5 like KM393_04000 PF02581 Thiamine monophosphate synthase KM393_04005 PF01266 FAD dependent oxidoreductase KM393_04010 PF02597 ThiS family KM393_04015 PF05690 Thiazole biosynthesis protein ThiG KM393_04020 PF00899 ThiF family KM393_04025 PF08543 Phosphomethylpyrimidine kinase KM393_04050 PF03814 Potassium-transporting ATPase A subunit KM393_04060 PF02669 K+-transporting ATPase, c chain KM393_04065 PF02702 Osmosensitive K+ channel His kinase sensor domain KM393_04070 PF07690 Major Facilitator Superfamily KM393_04075 PF01047 MarR family KM393_04090 PF00860 Permease family KM393_04110 PF00294 pfkB family carbohydrate kinase KM393_04115 PF08244 Glycosyl hydrolases family 32 C terminal KM393_04115 PF00251 Glycosyl hydrolases family 32 N-terminal domain KM393_04120 PF02378 Phosphotransferase system, EIIC KM393_04120 PF00367 phosphotransferase system, EIIB KM393_04125 PF00356 Bacterial regulatory proteins, lacI family KM393_04125 PF13407 Periplasmic binding protein domain KM393_04135 PF00085 Thioredoxin KM393_04140 PF02600 Disulfide bond formation protein DsbB KM393_04145 PF14148 YhdB-like protein KM393_04165 PF03323 Bacillus/Clostridium GerA spore germination protein KM393_04175 PF00881 Nitroreductase family KM393_04180 PF04293 SpoVR like protein KM393_04205 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM393_04205 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM393_04210 PF02583 Metal-sensitive transcriptional repressor KM393_04215 PF00581 Rhodanese-like domain KM393_04215 PF01206 Sulfurtransferase TusA KM393_04220 PF00753 Metallo-beta-lactamase superfamily KM393_04220 PF00581 Rhodanese-like domain KM393_04225 PF01206 Sulfurtransferase TusA KM393_04230 PF00581 Rhodanese-like domain KM393_04240 PF13686 DsrE/DsrF/DrsH-like family KM393_04245 PF01925 Sulfite exporter TauE/SafE KM393_04255 PF03816 Cell envelope-related transcriptional attenuator domain KM393_04260 PF08240 Alcohol dehydrogenase GroES-like domain KM393_04260 PF00107 Zinc-binding dehydrogenase KM393_04265 PF02690 Na+/Pi-cotransporter KM393_04270 PF07690 Major Facilitator Superfamily KM393_04280 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KM393_04280 PF00874 PRD domain KM393_04280 PF05043 Mga helix-turn-helix domain KM393_04280 PF08279 HTH domain KM393_04285 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KM393_04290 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KM393_04295 PF02378 Phosphotransferase system, EIIC KM393_04310 PF06725 3D domain KM393_04310 PF01476 LysM domain KM393_04315 PF02687 FtsX-like permease family KM393_04315 PF12704 MacB-like periplasmic core domain KM393_04320 PF00005 ABC transporter KM393_04330 PF09529 Integral membrane protein (intg_mem_TP0381) KM393_04345 PF05525 Branched-chain amino acid transport protein KM393_04350 PF05067 Manganese containing catalase KM393_04355 PF12652 CotJB protein KM393_04360 PF11007 Spore coat associated protein JA (CotJA) KM393_04375 PF02735 Ku70/Ku80 beta-barrel domain KM393_04385 PF09335 SNARE associated Golgi protein KM393_04420 PF13520 Amino acid permease KM393_04425 PF00999 Sodium/hydrogen exchanger family KM393_04435 PF01418 Helix-turn-helix domain, rpiR family KM393_04435 PF01380 SIS domain KM393_04440 PF01380 SIS domain KM393_04445 PF00367 phosphotransferase system, EIIB KM393_04445 PF02378 Phosphotransferase system, EIIC KM393_04455 PF07681 DoxX KM393_04470 PF00892 EamA-like transporter family KM393_04475 PF01037 Lrp/AsnC ligand binding domain KM393_04485 PF00893 Small Multidrug Resistance protein KM393_04490 PF00893 Small Multidrug Resistance protein KM393_04495 PF17934 Tetracyclin repressor-like, C-terminal domain KM393_04495 PF00440 Bacterial regulatory proteins, tetR family KM393_04500 PF07690 Major Facilitator Superfamily KM393_04505 PF01638 HxlR-like helix-turn-helix KM393_04515 PF02525 Flavodoxin-like fold KM393_04520 PF12793 Sugar transport-related sRNA regulator N-term KM393_04520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM393_04525 PF07690 Major Facilitator Superfamily KM393_04535 PF01965 DJ-1/PfpI family KM393_04540 PF00199 Catalase KM393_04540 PF06628 Catalase-related immune-responsive KM393_04540 PF18011 C-terminal domain found in long catalases KM393_04550 PF13520 Amino acid permease KM393_04555 PF01177 Asp/Glu/Hydantoin racemase KM393_04565 PF00171 Aldehyde dehydrogenase family KM393_04570 PF00005 ABC transporter KM393_04570 PF00664 ABC transporter transmembrane region KM393_04580 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM393_04585 PF00528 Binding-protein-dependent transport system inner membrane component KM393_04590 PF00005 ABC transporter KM393_04595 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM393_04605 PF14398 YheC/D like ATP-grasp KM393_04615 PF04286 Protein of unknown function (DUF445) KM393_04620 PF06133 Control of competence regulator ComK, YlbF/YmcA KM393_04635 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM393_04635 PF00205 Thiamine pyrophosphate enzyme, central domain KM393_04635 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM393_04640 PF03306 Alpha-acetolactate decarboxylase KM393_04650 PF02245 Methylpurine-DNA glycosylase (MPG) KM393_04670 PF04055 Radical SAM superfamily KM393_04675 PF13193 AMP-binding enzyme C-terminal domain KM393_04675 PF00501 AMP-binding enzyme KM393_04685 PF00916 Sulfate permease family KM393_04685 PF01740 STAS domain KM393_04705 PF01043 SecA preprotein cross-linking domain KM393_04705 PF07517 SecA DEAD-like domain KM393_04705 PF07516 SecA Wing and Scaffold domain KM393_04710 PF14667 Polysaccharide biosynthesis C-terminal domain KM393_04710 PF01943 Polysaccharide biosynthesis protein KM393_04720 PF02368 Bacterial Ig-like domain (group 2) KM393_04720 PF13205 Bacterial Ig-like domain KM393_04720 PF00395 S-layer homology domain KM393_04725 PF00395 S-layer homology domain KM393_04735 PF03062 MBOAT, membrane-bound O-acyltransferase family KM393_04740 PF03062 MBOAT, membrane-bound O-acyltransferase family KM393_04755 PF00378 Enoyl-CoA hydratase/isomerase KM393_04775 PF05343 M42 glutamyl aminopeptidase KM393_04780 PF01520 N-acetylmuramoyl-L-alanine amidase KM393_04780 PF00395 S-layer homology domain KM393_04795 PF05544 Proline racemase KM393_04800 PF02423 Ornithine cyclodeaminase/mu-crystallin family KM393_04830 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM393_04835 PF00528 Binding-protein-dependent transport system inner membrane component KM393_04840 PF00528 Binding-protein-dependent transport system inner membrane component KM393_04840 PF12911 N-terminal TM domain of oligopeptide transport permease C KM393_04850 PF00005 ABC transporter KM393_04850 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM393_04855 PF01541 GIY-YIG catalytic domain KM393_04885 PF00083 Sugar (and other) transporter KM393_04890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_04890 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KM393_04895 PF12431 Transcriptional regulator KM393_04895 PF00072 Response regulator receiver domain KM393_04895 PF08279 HTH domain KM393_04900 PF03401 Tripartite tricarboxylate transporter family receptor KM393_04905 PF02342 TerD domain KM393_04930 PF13411 MerR HTH family regulatory protein KM393_04930 PF06445 GyrI-like small molecule binding domain KM393_04945 PF00772 DnaB-like helicase N terminal domain KM393_04945 PF03796 DnaB-like helicase C terminal domain KM393_04970 PF01925 Sulfite exporter TauE/SafE KM393_04985 PF07690 Major Facilitator Superfamily KM393_05030 PF07993 Male sterility protein KM393_05030 PF00550 Phosphopantetheine attachment site KM393_05035 PF18665 Tetracyclin repressor-like, C-terminal domain KM393_05035 PF00440 Bacterial regulatory proteins, tetR family KM393_05055 PF01066 CDP-alcohol phosphatidyltransferase KM393_05075 PF02733 Dak1 domain KM393_05085 PF02733 Dak1 domain KM393_05090 PF02525 Flavodoxin-like fold KM393_05095 PF02082 Transcriptional regulator KM393_05125 PF00672 HAMP domain KM393_05125 PF01966 HD domain KM393_05145 PF00395 S-layer homology domain KM393_05170 PF11181 Heat induced stress protein YflT KM393_05175 PF05532 CsbD-like KM393_05190 PF01740 STAS domain KM393_05195 PF13581 Histidine kinase-like ATPase domain KM393_05200 PF04542 Sigma-70 region 2 KM393_05200 PF04539 Sigma-70 region 3 KM393_05200 PF04545 Sigma-70, region 4 KM393_05210 PF13426 PAS domain KM393_05210 PF07228 Stage II sporulation protein E (SpoIIE) KM393_05215 PF01739 CheR methyltransferase, SAM binding domain KM393_05215 PF03705 CheR methyltransferase, all-alpha domain KM393_05220 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM393_05220 PF00072 Response regulator receiver domain KM393_05220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_05220 PF00512 His Kinase A (phospho-acceptor) domain KM393_05220 PF01627 Hpt domain KM393_05245 PF01906 Putative heavy-metal-binding KM393_05255 PF08240 Alcohol dehydrogenase GroES-like domain KM393_05255 PF00107 Zinc-binding dehydrogenase KM393_05260 PF11121 Protein of unknown function (DUF2639) KM393_05275 PF00149 Calcineurin-like phosphoesterase KM393_05280 PF13514 AAA domain KM393_05285 PF12323 Helix-turn-helix domain KM393_05285 PF01385 Probable transposase KM393_05285 PF07282 Putative transposase DNA-binding domain KM393_05295 PF01966 HD domain KM393_05295 PF01336 OB-fold nucleic acid binding domain KM393_05300 PF00440 Bacterial regulatory proteins, tetR family KM393_05305 PF07690 Major Facilitator Superfamily KM393_05310 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM393_05320 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM393_05325 PF18801 response regulator aspartate phosphatase H, N terminal KM393_05330 PF00561 alpha/beta hydrolase fold KM393_05330 PF08386 TAP-like protein KM393_05350 PF04309 Glycerol-3-phosphate responsive antiterminator KM393_05355 PF00230 Major intrinsic protein KM393_05360 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM393_05360 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM393_05365 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KM393_05365 PF01266 FAD dependent oxidoreductase KM393_05380 PF08281 Sigma-70, region 4 KM393_05380 PF04542 Sigma-70 region 2 KM393_05405 PF07690 Major Facilitator Superfamily KM393_05410 PF07690 Major Facilitator Superfamily KM393_05420 PF13538 UvrD-like helicase C-terminal domain KM393_05440 PF01047 MarR family KM393_05445 PF12732 YtxH-like protein KM393_05450 PF01230 HIT domain KM393_05455 PF00005 ABC transporter KM393_05460 PF05975 Bacterial ABC transporter protein EcsB KM393_05465 PF12787 EcsC protein family KM393_05475 PF00440 Bacterial regulatory proteins, tetR family KM393_05475 PF17934 Tetracyclin repressor-like, C-terminal domain KM393_05485 PF03703 Bacterial PH domain KM393_05535 PF03703 Bacterial PH domain KM393_05540 PF03703 Bacterial PH domain KM393_05545 PF03992 Antibiotic biosynthesis monooxygenase KM393_05550 PF00912 Transglycosylase KM393_05550 PF00905 Penicillin binding protein transpeptidase domain KM393_05555 PF01208 Uroporphyrinogen decarboxylase (URO-D) KM393_05560 PF00762 Ferrochelatase KM393_05565 PF01593 Flavin containing amine oxidoreductase KM393_05590 PF03965 Penicillinase repressor KM393_05600 PF17932 Tetracyclin repressor-like, C-terminal domain KM393_05600 PF00440 Bacterial regulatory proteins, tetR family KM393_05630 PF00356 Bacterial regulatory proteins, lacI family KM393_05635 PF14149 YhfH-like protein KM393_05640 PF12706 Beta-lactamase superfamily domain KM393_05645 PF03099 Biotin/lipoate A/B protein ligase family KM393_05645 PF10437 Bacterial lipoate protein ligase C-terminus KM393_05655 PF00501 AMP-binding enzyme KM393_05655 PF13193 AMP-binding enzyme C-terminal domain KM393_05665 PF01520 N-acetylmuramoyl-L-alanine amidase KM393_05665 PF00395 S-layer homology domain KM393_05670 PF05593 RHS Repeat KM393_05685 PF05593 RHS Repeat KM393_05725 PF01966 HD domain KM393_05735 PF08281 Sigma-70, region 4 KM393_05735 PF04542 Sigma-70 region 2 KM393_05740 PF06445 GyrI-like small molecule binding domain KM393_05740 PF12833 Helix-turn-helix domain KM393_05755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_05755 PF00512 His Kinase A (phospho-acceptor) domain KM393_05760 PF00486 Transcriptional regulatory protein, C terminal KM393_05760 PF00072 Response regulator receiver domain KM393_05790 PF01435 Peptidase family M48 KM393_05790 PF16491 CAAX prenyl protease N-terminal, five membrane helices KM393_05795 PF02743 Cache domain KM393_05795 PF00672 HAMP domain KM393_05795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM393_05800 PF00892 EamA-like transporter family KM393_05805 PF03424 Carbohydrate binding domain (family 17/28) KM393_05805 PF00395 S-layer homology domain KM393_05805 PF00150 Cellulase (glycosyl hydrolase family 5) KM393_05815 PF00395 S-layer homology domain KM393_05820 PF01274 Malate synthase KM393_05825 PF00463 Isocitrate lyase family KM393_05835 PF00313 'Cold-shock' DNA-binding domain KM393_05850 PF06338 ComK protein KM393_05855 PF09335 SNARE associated Golgi protein KM393_05860 PF10502 Signal peptidase, peptidase S26 KM393_05865 PF12705 PD-(D/E)XK nuclease superfamily KM393_05865 PF13361 UvrD-like helicase C-terminal domain KM393_05870 PF12705 PD-(D/E)XK nuclease superfamily KM393_05870 PF00580 UvrD/REP helicase N-terminal domain KM393_05870 PF13361 UvrD-like helicase C-terminal domain KM393_05880 PF10676 Spore germination protein gerPA/gerPF KM393_05885 PF10970 Spore germination protein GerPE KM393_05895 PF10737 Spore germination protein GerPC KM393_05900 PF10803 Spore germination GerPB KM393_05905 PF10676 Spore germination protein gerPA/gerPF KM393_05915 PF01557 Fumarylacetoacetate (FAA) hydrolase family KM393_05925 PF00202 Aminotransferase class-III KM393_05930 PF07457 Protein of unknown function (DUF1516) KM393_05940 PF13537 Glutamine amidotransferase domain KM393_05940 PF00733 Asparagine synthase KM393_05945 PF00762 Ferrochelatase KM393_05950 PF00199 Catalase KM393_05950 PF06628 Catalase-related immune-responsive KM393_05955 PF00909 Ammonium Transporter Family KM393_05960 PF00128 Alpha amylase, catalytic domain KM393_05970 PF04461 Protein of unknown function (DUF520) KM393_05975 PF13509 S1 domain KM393_05975 PF17783 CvfB-like winged helix domain KM393_05985 PF00639 PPIC-type PPIASE domain KM393_05995 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM393_05995 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM393_06000 PF12758 Protein of unknown function (DUF3813) KM393_06015 PF14168 YjzC-like protein KM393_06020 PF10431 C-terminal, D2-small domain, of ClpB protein KM393_06020 PF00004 ATPase family associated with various cellular activities (AAA) KM393_06020 PF17871 AAA lid domain KM393_06020 PF07724 AAA domain (Cdc48 subfamily) KM393_06020 PF02861 Clp amino terminal domain, pathogenicity island component KM393_06040 PF10815 ComZ KM393_06045 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM393_06045 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM393_06050 PF00109 Beta-ketoacyl synthase, N-terminal domain KM393_06050 PF02801 Beta-ketoacyl synthase, C-terminal domain KM393_06055 PF10026 Predicted Zn-dependent protease (DUF2268) KM393_06060 PF12227 Protein of unknown function (DUF3603) KM393_06065 PF00579 tRNA synthetases class I (W and Y) KM393_06075 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM393_06080 PF00528 Binding-protein-dependent transport system inner membrane component KM393_06085 PF12911 N-terminal TM domain of oligopeptide transport permease C KM393_06085 PF00528 Binding-protein-dependent transport system inner membrane component KM393_06090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM393_06090 PF00005 ABC transporter KM393_06095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM393_06095 PF00005 ABC transporter KM393_06100 PF01554 MatE KM393_06105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM393_06115 PF03960 ArsC family KM393_06120 PF03741 Integral membrane protein TerC family KM393_06125 PF05389 Negative regulator of genetic competence (MecA) KM393_06130 PF13091 PLD-like domain KM393_06130 PF13396 Phospholipase_D-nuclease N-terminal KM393_06140 PF01432 Peptidase family M3 KM393_06140 PF08439 Oligopeptidase F KM393_06155 PF01152 Bacterial-like globin KM393_06160 PF01928 CYTH domain KM393_06170 PF04607 Region found in RelA / SpoT proteins KM393_06175 PF01513 ATP-NAD kinase KM393_06180 PF00849 RNA pseudouridylate synthase KM393_06190 PF00149 Calcineurin-like phosphoesterase KM393_06200 PF00535 Glycosyl transferase family 2 KM393_06205 PF08241 Methyltransferase domain KM393_06210 PF05711 Macrocin-O-methyltransferase (TylF) KM393_06220 PF00535 Glycosyl transferase family 2 KM393_06220 PF13181 Tetratricopeptide repeat KM393_06240 PF00483 Nucleotidyl transferase KM393_06245 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase KM393_06250 PF16363 GDP-mannose 4,6 dehydratase KM393_06255 PF04321 RmlD substrate binding domain KM393_06275 PF07098 Protein of unknown function (DUF1360) KM393_06295 PF13361 UvrD-like helicase C-terminal domain KM393_06295 PF00580 UvrD/REP helicase N-terminal domain KM393_06300 PF13673 Acetyltransferase (GNAT) domain KM393_06310 PF00756 Putative esterase KM393_06325 PF02368 Bacterial Ig-like domain (group 2) KM393_06330 PF00474 Sodium:solute symporter family KM393_06335 PF00425 chorismate binding enzyme KM393_06335 PF04715 Anthranilate synthase component I, N terminal region KM393_06340 PF00591 Glycosyl transferase family, a/b domain KM393_06340 PF02885 Glycosyl transferase family, helical bundle domain KM393_06340 PF00117 Glutamine amidotransferase class-I KM393_06345 PF00591 Glycosyl transferase family, a/b domain KM393_06345 PF02885 Glycosyl transferase family, helical bundle domain KM393_06350 PF00218 Indole-3-glycerol phosphate synthase KM393_06355 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KM393_06360 PF00291 Pyridoxal-phosphate dependent enzyme KM393_06365 PF00290 Tryptophan synthase alpha chain KM393_06375 PF02652 L-lactate permease KM393_06380 PF10042 Uncharacterized conserved protein (DUF2278) KM393_06405 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM393_06405 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM393_06435 PF02817 e3 binding domain KM393_06435 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM393_06435 PF00364 Biotin-requiring enzyme KM393_06440 PF02779 Transketolase, pyrimidine binding domain KM393_06440 PF00676 Dehydrogenase E1 component KM393_06440 PF16870 2-oxoglutarate dehydrogenase C-terminal KM393_06445 PF01381 Helix-turn-helix KM393_06505 PF13649 Methyltransferase domain KM393_06515 PF00768 D-alanyl-D-alanine carboxypeptidase KM393_06515 PF07943 Penicillin-binding protein 5, C-terminal domain KM393_06525 PF12389 Camelysin metallo-endopeptidase KM393_06535 PF12389 Camelysin metallo-endopeptidase KM393_06540 PF08671 Anti-repressor SinI KM393_06540 PF01381 Helix-turn-helix KM393_06550 PF05547 Immune inhibitor A peptidase M6 KM393_06555 PF00171 Aldehyde dehydrogenase family KM393_06560 PF00005 ABC transporter KM393_06560 PF08402 TOBE domain KM393_06565 PF00528 Binding-protein-dependent transport system inner membrane component KM393_06570 PF00528 Binding-protein-dependent transport system inner membrane component KM393_06575 PF13416 Bacterial extracellular solute-binding protein KM393_06585 PF03176 MMPL family KM393_06595 PF00849 RNA pseudouridylate synthase KM393_06595 PF01479 S4 domain KM393_06605 PF00188 Cysteine-rich secretory protein family KM393_06610 PF02754 Cysteine-rich domain KM393_06610 PF13183 4Fe-4S dicluster domain KM393_06615 PF02913 FAD linked oxidases, C-terminal domain KM393_06615 PF01565 FAD binding domain KM393_06620 PF05651 Putative sugar diacid recognition KM393_06620 PF13556 PucR C-terminal helix-turn-helix domain KM393_06620 PF17853 GGDEF-like domain KM393_06630 PF00486 Transcriptional regulatory protein, C terminal KM393_06630 PF00072 Response regulator receiver domain KM393_06635 PF00672 HAMP domain KM393_06635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_06635 PF00512 His Kinase A (phospho-acceptor) domain KM393_06635 PF18698 Histidine kinase sensor domain KM393_06635 PF00989 PAS fold KM393_06640 PF07729 FCD domain KM393_06640 PF00392 Bacterial regulatory proteins, gntR family KM393_06645 PF02754 Cysteine-rich domain KM393_06650 PF11870 Domain of unknown function (DUF3390) KM393_06650 PF13183 4Fe-4S dicluster domain KM393_06650 PF02589 LUD domain KM393_06655 PF02589 LUD domain KM393_06660 PF06750 Bacterial Peptidase A24 N-terminal domain KM393_06660 PF01478 Type IV leader peptidase family KM393_06675 PF01226 Formate/nitrite transporter KM393_06680 PF03741 Integral membrane protein TerC family KM393_06685 PF02386 Cation transport protein KM393_06690 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM393_06695 PF01575 MaoC like domain KM393_06720 PF00561 alpha/beta hydrolase fold KM393_06725 PF01266 FAD dependent oxidoreductase KM393_06730 PF02386 Cation transport protein KM393_06760 PF13419 Haloacid dehalogenase-like hydrolase KM393_06765 PF00266 Aminotransferase class-V KM393_06775 PF08220 DeoR-like helix-turn-helix domain KM393_06775 PF00455 DeoR C terminal sensor domain KM393_06795 PF04748 Divergent polysaccharide deacetylase KM393_06805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_06805 PF02743 Cache domain KM393_06805 PF00512 His Kinase A (phospho-acceptor) domain KM393_06810 PF01047 MarR family KM393_06820 PF12867 DinB superfamily KM393_06825 PF13426 PAS domain KM393_06825 PF13188 PAS domain KM393_06825 PF00512 His Kinase A (phospho-acceptor) domain KM393_06825 PF00989 PAS fold KM393_06825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_06830 PF06508 Queuosine biosynthesis protein QueC KM393_06835 PF01242 6-pyruvoyl tetrahydropterin synthase KM393_06840 PF04055 Radical SAM superfamily KM393_06845 PF14489 QueF-like protein KM393_06850 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) KM393_06880 PF07972 NrdI Flavodoxin like KM393_06900 PF00268 Ribonucleotide reductase, small chain KM393_06905 PF00392 Bacterial regulatory proteins, gntR family KM393_06910 PF00005 ABC transporter KM393_06920 PF00005 ABC transporter KM393_06940 PF01037 Lrp/AsnC ligand binding domain KM393_06950 PF00857 Isochorismatase family KM393_06960 PF02016 LD-carboxypeptidase N-terminal domain KM393_06960 PF17676 LD-carboxypeptidase C-terminal domain KM393_06965 PF03060 Nitronate monooxygenase KM393_06970 PF04914 DltD protein KM393_06975 PF00550 Phosphopantetheine attachment site KM393_06980 PF03062 MBOAT, membrane-bound O-acyltransferase family KM393_06985 PF00501 AMP-binding enzyme KM393_06985 PF13193 AMP-binding enzyme C-terminal domain KM393_06995 PF01546 Peptidase family M20/M25/M40 KM393_06995 PF07687 Peptidase dimerisation domain KM393_07005 PF00258 Flavodoxin KM393_07020 PF01636 Phosphotransferase enzyme family KM393_07040 PF01554 MatE KM393_07045 PF02673 Bacitracin resistance protein BacA KM393_07060 PF01047 MarR family KM393_07070 PF00375 Sodium:dicarboxylate symporter family KM393_07075 PF02386 Cation transport protein KM393_07085 PF09579 Sporulation protein YtfJ (Spore_YtfJ) KM393_07095 PF03698 Uncharacterised protein family (UPF0180) KM393_07110 PF01063 Amino-transferase class IV KM393_07115 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM393_07115 PF00205 Thiamine pyrophosphate enzyme, central domain KM393_07115 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM393_07120 PF10369 Small subunit of acetolactate synthase KM393_07120 PF01842 ACT domain KM393_07125 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KM393_07125 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KM393_07130 PF08502 LeuA allosteric (dimerisation) domain KM393_07130 PF00682 HMGL-like KM393_07135 PF00180 Isocitrate/isopropylmalate dehydrogenase KM393_07140 PF00330 Aconitase family (aconitate hydratase) KM393_07145 PF00694 Aconitase C-terminal domain KM393_07150 PF13393 Histidyl-tRNA synthetase KM393_07155 PF01634 ATP phosphoribosyltransferase KM393_07160 PF00815 Histidinol dehydrogenase KM393_07165 PF00475 Imidazoleglycerol-phosphate dehydratase KM393_07170 PF00117 Glutamine amidotransferase class-I KM393_07175 PF00977 Histidine biosynthesis protein KM393_07180 PF00977 Histidine biosynthesis protein KM393_07185 PF01502 Phosphoribosyl-AMP cyclohydrolase KM393_07190 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase KM393_07195 PF02811 PHP domain KM393_07205 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KM393_07205 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KM393_07210 PF01066 CDP-alcohol phosphatidyltransferase KM393_07215 PF00884 Sulfatase KM393_07225 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KM393_07225 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KM393_07235 PF01507 Phosphoadenosine phosphosulfate reductase family KM393_07240 PF01747 ATP-sulfurylase KM393_07240 PF14306 PUA-like domain KM393_07250 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KM393_07250 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KM393_07260 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM393_07265 PF01903 CbiX KM393_07275 PF00209 Sodium:neurotransmitter symporter family KM393_07285 PF00375 Sodium:dicarboxylate symporter family KM393_07295 PF03553 Na+/H+ antiporter family KM393_07310 PF09922 Cell wall-active antibiotics response 4TMS YvqF KM393_07315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_07315 PF07730 Histidine kinase KM393_07315 PF00672 HAMP domain KM393_07320 PF00196 Bacterial regulatory proteins, luxR family KM393_07320 PF00072 Response regulator receiver domain KM393_07330 PF05525 Branched-chain amino acid transport protein KM393_07340 PF08241 Methyltransferase domain KM393_07365 PF00970 Oxidoreductase FAD-binding domain KM393_07365 PF00042 Globin KM393_07365 PF00175 Oxidoreductase NAD-binding domain KM393_07380 PF01925 Sulfite exporter TauE/SafE KM393_07385 PF01384 Phosphate transporter family KM393_07390 PF01865 Protein of unknown function DUF47 KM393_07395 PF00905 Penicillin binding protein transpeptidase domain KM393_07395 PF00912 Transglycosylase KM393_07410 PF00989 PAS fold KM393_07410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_07410 PF00512 His Kinase A (phospho-acceptor) domain KM393_07415 PF01904 Protein of unknown function DUF72 KM393_07425 PF00589 Phage integrase family KM393_07430 PF00989 PAS fold KM393_07430 PF16736 Single Cache-like KM393_07430 PF00512 His Kinase A (phospho-acceptor) domain KM393_07430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_07435 PF01048 Phosphorylase superfamily KM393_07450 PF03706 Lysylphosphatidylglycerol synthase TM region KM393_07450 PF09924 Uncharacterised conserved protein (DUF2156) KM393_07465 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KM393_07465 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KM393_07470 PF07943 Penicillin-binding protein 5, C-terminal domain KM393_07470 PF00768 D-alanyl-D-alanine carboxypeptidase KM393_07475 PF07670 Nucleoside recognition KM393_07480 PF07670 Nucleoside recognition KM393_07485 PF01479 S4 domain KM393_07485 PF00849 RNA pseudouridylate synthase KM393_07490 PF00578 AhpC/TSA family KM393_07495 PF05140 ResB-like family KM393_07500 PF01578 Cytochrome C assembly protein KM393_07505 PF00486 Transcriptional regulatory protein, C terminal KM393_07505 PF00072 Response regulator receiver domain KM393_07510 PF00672 HAMP domain KM393_07510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_07510 PF18698 Histidine kinase sensor domain KM393_07510 PF00512 His Kinase A (phospho-acceptor) domain KM393_07510 PF00989 PAS fold KM393_07515 PF01923 Cobalamin adenosyltransferase KM393_07530 PF12822 ECF transporter, substrate-specific component KM393_07540 PF14493 Helix-turn-helix domain KM393_07545 PF00271 Helicase conserved C-terminal domain KM393_07545 PF00270 DEAD/DEAH box helicase KM393_07550 PF02517 CPBP intramembrane metalloprotease KM393_07565 PF13411 MerR HTH family regulatory protein KM393_07565 PF02607 B12 binding domain KM393_07565 PF02310 B12 binding domain KM393_07570 PF05389 Negative regulator of genetic competence (MecA) KM393_07575 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KM393_07575 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KM393_07600 PF00710 Asparaginase, N-terminal KM393_07600 PF17763 Glutaminase/Asparaginase C-terminal domain KM393_07610 PF02224 Cytidylate kinase KM393_07615 PF00575 S1 RNA binding domain KM393_07620 PF01070 FMN-dependent dehydrogenase KM393_07625 PF14140 YpzI-like protein KM393_07635 PF14045 YIEGIA protein KM393_07645 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KM393_07645 PF01926 50S ribosome-binding GTPase KM393_07650 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KM393_07650 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KM393_07660 PF10966 Protein of unknown function (DUF2768) KM393_07670 PF09547 Stage IV sporulation protein A (spore_IV_A) KM393_07675 PF00216 Bacterial DNA-binding protein KM393_07680 PF01227 GTP cyclohydrolase I KM393_07685 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 KM393_07690 PF01209 ubiE/COQ5 methyltransferase family KM393_07695 PF00348 Polyprenyl synthetase KM393_07700 PF00334 Nucleoside diphosphate kinase KM393_07705 PF01264 Chorismate synthase KM393_07710 PF01761 3-dehydroquinate synthase KM393_07715 PF00155 Aminotransferase class I and II KM393_07725 PF08858 IDEAL domain KM393_07725 PF08864 UPF0302 domain KM393_07730 PF10673 Protein of unknown function (DUF2487) KM393_07735 PF00355 Rieske [2Fe-2S] domain KM393_07740 PF00033 Cytochrome b/b6/petB KM393_07745 PF00032 Cytochrome b(C-terminal)/b6/petD KM393_07745 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KM393_07750 PF07187 Protein of unknown function (DUF1405) KM393_07760 PF09577 Sporulation protein YpjB (SpoYpjB) KM393_07765 PF04298 Putative neutral zinc metallopeptidase KM393_07775 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM393_07775 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM393_07780 PF03819 MazG nucleotide pyrophosphohydrolase domain KM393_07785 PF05173 Dihydrodipicolinate reductase, C-terminus KM393_07785 PF01113 Dihydrodipicolinate reductase, N-terminus KM393_07790 PF02142 MGS-like domain KM393_07795 PF02585 GlcNAc-PI de-N-acetylase KM393_07800 PF13439 Glycosyltransferase Family 4 KM393_07800 PF00534 Glycosyl transferases group 1 KM393_07805 PF01743 Poly A polymerase head domain KM393_07805 PF12627 Probable RNA and SrmB- binding site of polymerase A KM393_07805 PF13735 tRNA nucleotidyltransferase domain 2 putative KM393_07810 PF02237 Biotin protein ligase C terminal domain KM393_07810 PF03099 Biotin/lipoate A/B protein ligase family KM393_07810 PF08279 HTH domain KM393_07820 PF02548 Ketopantoate hydroxymethyltransferase KM393_07825 PF02569 Pantoate-beta-alanine ligase KM393_07830 PF02261 Aspartate decarboxylase KM393_07835 PF00929 Exonuclease KM393_07835 PF13307 Helicase C-terminal domain KM393_07835 PF04851 Type III restriction enzyme, res subunit KM393_07840 PF14084 Protein of unknown function (DUF4264) KM393_07850 PF00155 Aminotransferase class I and II KM393_07855 PF07261 Replication initiation and membrane attachment KM393_07860 PF10576 Iron-sulfur binding domain of endonuclease III KM393_07860 PF00633 Helix-hairpin-helix motif KM393_07860 PF00730 HhH-GPD superfamily base excision DNA repair protein KM393_07870 PF00912 Transglycosylase KM393_07870 PF00905 Penicillin binding protein transpeptidase domain KM393_07880 PF03838 Recombination protein U KM393_07885 PF10720 Protein of unknown function (DUF2515) KM393_07920 PF06908 YspA SLOG family KM393_07925 PF05103 DivIVA protein KM393_07935 PF01170 Putative RNA methylase family UPF0020 KM393_07935 PF02926 THUMP domain KM393_07945 PF13307 Helicase C-terminal domain KM393_07950 PF02074 Carboxypeptidase Taq (M32) metallopeptidase KM393_07960 PF01636 Phosphotransferase enzyme family KM393_07965 PF00557 Metallopeptidase family M24 KM393_07970 PF00156 Phosphoribosyl transferase domain KM393_07975 PF00860 Permease family KM393_07980 PF04235 Protein of unknown function (DUF418) KM393_07985 PF00350 Dynamin family KM393_07995 PF00583 Acetyltransferase (GNAT) family KM393_08000 PF10752 Protein of unknown function (DUF2533) KM393_08005 PF00581 Rhodanese-like domain KM393_08040 PF00689 Cation transporting ATPase, C-terminus KM393_08040 PF00690 Cation transporter/ATPase, N-terminus KM393_08045 PF01367 5'-3' exonuclease, C-terminal SAM fold KM393_08045 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KM393_08070 PF02397 Bacterial sugar transferase KM393_08085 PF00535 Glycosyl transferase family 2 KM393_08090 PF13439 Glycosyltransferase Family 4 KM393_08090 PF00534 Glycosyl transferases group 1 KM393_08105 PF13673 Acetyltransferase (GNAT) domain KM393_08105 PF18014 Acetyltransferase (GNAT) domain KM393_08125 PF13456 Reverse transcriptase-like KM393_08130 PF01263 Aldose 1-epimerase KM393_08155 PF00313 'Cold-shock' DNA-binding domain KM393_08165 PF01810 LysE type translocator KM393_08180 PF04341 Protein of unknown function, DUF485 KM393_08185 PF00474 Sodium:solute symporter family KM393_08190 PF00202 Aminotransferase class-III KM393_08200 PF00999 Sodium/hydrogen exchanger family KM393_08205 PF00753 Metallo-beta-lactamase superfamily KM393_08205 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KM393_08205 PF17770 Ribonuclease J C-terminal domain KM393_08210 PF06445 GyrI-like small molecule binding domain KM393_08210 PF13411 MerR HTH family regulatory protein KM393_08220 PF04239 Protein of unknown function (DUF421) KM393_08225 PF02698 DUF218 domain KM393_08235 PF00881 Nitroreductase family KM393_08280 PF17209 Hfq protein KM393_08290 PF01618 MotA/TolQ/ExbB proton channel family KM393_08295 PF13677 Membrane MotB of proton-channel complex MotA/MotB KM393_08295 PF00691 OmpA family KM393_08300 PF00072 Response regulator receiver domain KM393_08305 PF01584 CheW-like domain KM393_08305 PF02895 Signal transducing histidine kinase, homodimeric domain KM393_08305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_08305 PF01627 Hpt domain KM393_08305 PF07194 P2 response regulator binding domain KM393_08310 PF01584 CheW-like domain KM393_08310 PF02895 Signal transducing histidine kinase, homodimeric domain KM393_08310 PF01627 Hpt domain KM393_08310 PF07194 P2 response regulator binding domain KM393_08310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_08315 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KM393_08315 PF04509 CheC-like family KM393_08330 PF03705 CheR methyltransferase, all-alpha domain KM393_08330 PF01739 CheR methyltransferase, SAM binding domain KM393_08350 PF00460 Flagella basal body rod protein KM393_08350 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM393_08375 PF00460 Flagella basal body rod protein KM393_08380 PF00460 Flagella basal body rod protein KM393_08380 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM393_08385 PF02049 Flagellar hook-basal body complex protein FliE KM393_08395 PF01706 FliG C-terminal domain KM393_08395 PF14842 FliG N-terminal domain KM393_08395 PF14841 FliG middle domain KM393_08405 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM393_08405 PF02874 ATP synthase alpha/beta family, beta-barrel domain KM393_08405 PF18269 T3SS EscN ATPase C-terminal domain KM393_08430 PF07559 Flagellar basal body protein FlaE KM393_08430 PF00460 Flagella basal body rod protein KM393_08430 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM393_08445 PF01584 CheW-like domain KM393_08445 PF00072 Response regulator receiver domain KM393_08450 PF12181 DNA binding domain of the motility gene repressor (MogR) KM393_08455 PF00535 Glycosyl transferase family 2 KM393_08490 PF00700 Bacterial flagellin C-terminal helical region KM393_08490 PF00669 Bacterial flagellin N-terminal helical region KM393_08495 PF01464 Transglycosylase SLT domain KM393_08510 PF04509 CheC-like family KM393_08510 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KM393_08520 PF00813 FliP family KM393_08525 PF01313 Bacterial export proteins, family 3 KM393_08535 PF01312 FlhB HrpN YscU SpaS Family KM393_08540 PF00771 FHIPEP family KM393_08545 PF00448 SRP54-type protein, GTPase domain KM393_08550 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM393_08550 PF00460 Flagella basal body rod protein KM393_08555 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM393_08555 PF02272 DHHA1 domain KM393_08555 PF01411 tRNA synthetases class II (A) KM393_08580 PF00440 Bacterial regulatory proteins, tetR family KM393_08580 PF17932 Tetracyclin repressor-like, C-terminal domain KM393_08585 PF17329 Family of unknown function (DUF5367) KM393_08600 PF03992 Antibiotic biosynthesis monooxygenase KM393_08605 PF08141 Small acid-soluble spore protein H family KM393_08625 PF03466 LysR substrate binding domain KM393_08625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM393_08630 PF08402 TOBE domain KM393_08630 PF00005 ABC transporter KM393_08640 PF00528 Binding-protein-dependent transport system inner membrane component KM393_08645 PF00753 Metallo-beta-lactamase superfamily KM393_08645 PF12706 Beta-lactamase superfamily domain KM393_08655 PF10787 Uncharacterised protein from bacillus cereus group KM393_08670 PF07943 Penicillin-binding protein 5, C-terminal domain KM393_08670 PF00768 D-alanyl-D-alanine carboxypeptidase KM393_08680 PF00300 Histidine phosphatase superfamily (branch 1) KM393_08710 PF13537 Glutamine amidotransferase domain KM393_08710 PF00733 Asparagine synthase KM393_08730 PF01545 Cation efflux family KM393_08730 PF16916 Dimerisation domain of Zinc Transporter KM393_08740 PF07729 FCD domain KM393_08740 PF00392 Bacterial regulatory proteins, gntR family KM393_08745 PF00892 EamA-like transporter family KM393_08750 PF02492 CobW/HypB/UreG, nucleotide-binding domain KM393_08750 PF07683 Cobalamin synthesis protein cobW C-terminal domain KM393_08755 PF03773 Predicted permease KM393_08765 PF00535 Glycosyl transferase family 2 KM393_08770 PF03553 Na+/H+ antiporter family KM393_08775 PF00206 Lyase KM393_08775 PF10415 Fumarase C C-terminus KM393_08800 PF03575 Peptidase family S51 KM393_08820 PF02683 Cytochrome C biogenesis protein transmembrane region KM393_08825 PF00578 AhpC/TSA family KM393_08845 PF00291 Pyridoxal-phosphate dependent enzyme KM393_08850 PF04286 Protein of unknown function (DUF445) KM393_08875 PF00196 Bacterial regulatory proteins, luxR family KM393_08875 PF00072 Response regulator receiver domain KM393_08880 PF07730 Histidine kinase KM393_08880 PF13492 GAF domain KM393_08880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_08880 PF13185 GAF domain KM393_08885 PF00005 ABC transporter KM393_08900 PF13091 PLD-like domain KM393_08905 PF00696 Amino acid kinase family KM393_08910 PF00375 Sodium:dicarboxylate symporter family KM393_08915 PF00206 Lyase KM393_08915 PF10415 Fumarase C C-terminus KM393_08920 PF03949 Malic enzyme, NAD binding domain KM393_08920 PF00390 Malic enzyme, N-terminal domain KM393_08925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_08930 PF08664 YcbB domain KM393_08930 PF00072 Response regulator receiver domain KM393_08935 PF04434 SWIM zinc finger KM393_08935 PF00176 SNF2 family N-terminal domain KM393_08935 PF00271 Helicase conserved C-terminal domain KM393_08950 PF03590 Aspartate-ammonia ligase KM393_08970 PF13840 ACT domain KM393_08970 PF00696 Amino acid kinase family KM393_08980 PF13761 Domain of unknown function (DUF4166) KM393_08985 PF14158 YndJ-like protein KM393_08990 PF00293 NUDIX domain KM393_08995 PF00395 S-layer homology domain KM393_08995 PF13205 Bacterial Ig-like domain KM393_08995 PF02368 Bacterial Ig-like domain (group 2) KM393_09005 PF07690 Major Facilitator Superfamily KM393_09020 PF02554 Carbon starvation protein CstA KM393_09025 PF03976 Polyphosphate kinase 2 (PPK2) KM393_09035 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM393_09035 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM393_09045 PF13167 GTP-binding GTPase N-terminal KM393_09045 PF16360 GTP-binding GTPase Middle Region KM393_09045 PF01926 50S ribosome-binding GTPase KM393_09055 PF07690 Major Facilitator Superfamily KM393_09060 PF00291 Pyridoxal-phosphate dependent enzyme KM393_09075 PF01943 Polysaccharide biosynthesis protein KM393_09075 PF14667 Polysaccharide biosynthesis C-terminal domain KM393_09080 PF00209 Sodium:neurotransmitter symporter family KM393_09085 PF03422 Carbohydrate binding module (family 6) KM393_09085 PF01522 Polysaccharide deacetylase KM393_09085 PF00457 Glycosyl hydrolases family 11 KM393_09095 PF04239 Protein of unknown function (DUF421) KM393_09110 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KM393_09110 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM393_09125 PF01625 Peptide methionine sulfoxide reductase KM393_09135 PF01063 Amino-transferase class IV KM393_09140 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM393_09140 PF00205 Thiamine pyrophosphate enzyme, central domain KM393_09140 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM393_09145 PF10369 Small subunit of acetolactate synthase KM393_09150 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KM393_09150 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KM393_09155 PF00920 Dehydratase family KM393_09160 PF00585 C-terminal regulatory domain of Threonine dehydratase KM393_09160 PF00291 Pyridoxal-phosphate dependent enzyme KM393_09170 PF09587 Bacterial capsule synthesis protein PGA_cap KM393_09185 PF07690 Major Facilitator Superfamily KM393_09190 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase KM393_09200 PF04397 LytTr DNA-binding domain KM393_09200 PF00072 Response regulator receiver domain KM393_09205 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain KM393_09205 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain KM393_09220 PF01979 Amidohydrolase family KM393_09225 PF13026 Protein of unknown function (DUF3887) KM393_09225 PF12146 Serine aminopeptidase, S33 KM393_09255 PF13186 Iron-sulfur cluster-binding domain KM393_09255 PF04055 Radical SAM superfamily KM393_09260 PF13302 Acetyltransferase (GNAT) domain KM393_09265 PF00072 Response regulator receiver domain KM393_09265 PF00486 Transcriptional regulatory protein, C terminal KM393_09280 PF01566 Natural resistance-associated macrophage protein KM393_09285 PF12368 Rhodanase C-terminal KM393_09285 PF17773 UPF0176 acylphosphatase like domain KM393_09285 PF00581 Rhodanese-like domain KM393_09295 PF08546 Ketopantoate reductase PanE/ApbA C terminal KM393_09295 PF02558 Ketopantoate reductase PanE/ApbA KM393_09310 PF05791 Bacillus haemolytic enterotoxin (HBL) KM393_09325 PF04198 Putative sugar-binding domain KM393_09330 PF01791 DeoC/LacD family aldolase KM393_09335 PF07662 Na+ dependent nucleoside transporter C-terminus KM393_09335 PF01773 Na+ dependent nucleoside transporter N-terminus KM393_09340 PF00591 Glycosyl transferase family, a/b domain KM393_09340 PF02885 Glycosyl transferase family, helical bundle domain KM393_09340 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain KM393_09345 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM393_09355 PF05979 Bacterial protein of unknown function (DUF896) KM393_09375 PF05195 Aminopeptidase P, N-terminal domain KM393_09375 PF00557 Metallopeptidase family M24 KM393_09380 PF07731 Multicopper oxidase KM393_09380 PF07732 Multicopper oxidase KM393_09385 PF01551 Peptidase family M23 KM393_09395 PF01131 DNA topoisomerase KM393_09395 PF13342 C-terminal repeat of topoisomerase KM393_09395 PF01396 Topoisomerase DNA binding C4 zinc finger KM393_09395 PF01751 Toprim domain KM393_09410 PF02525 Flavodoxin-like fold KM393_09425 PF04234 CopC domain KM393_09425 PF05425 Copper resistance protein D KM393_09425 PF13115 YtkA-like KM393_09430 PF07987 Domain of unkown function (DUF1775) KM393_09440 PF00892 EamA-like transporter family KM393_09445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM393_09445 PF03466 LysR substrate binding domain KM393_09450 PF02082 Transcriptional regulator KM393_09455 PF01323 DSBA-like thioredoxin domain KM393_09460 PF00881 Nitroreductase family KM393_09465 PF01425 Amidase KM393_09470 PF01594 AI-2E family transporter KM393_09475 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KM393_09475 PF00056 lactate/malate dehydrogenase, NAD binding domain KM393_09480 PF01593 Flavin containing amine oxidoreductase KM393_09485 PF07683 Cobalamin synthesis protein cobW C-terminal domain KM393_09485 PF02492 CobW/HypB/UreG, nucleotide-binding domain KM393_09500 PF00501 AMP-binding enzyme KM393_09500 PF13193 AMP-binding enzyme C-terminal domain KM393_09505 PF01575 MaoC like domain KM393_09510 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM393_09510 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM393_09520 PF00005 ABC transporter KM393_09520 PF12399 Branched-chain amino acid ATP-binding cassette transporter KM393_09525 PF00005 ABC transporter KM393_09530 PF02653 Branched-chain amino acid transport system / permease component KM393_09540 PF03466 LysR substrate binding domain KM393_09540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM393_09550 PF14552 Tautomerase enzyme KM393_09560 PF01047 MarR family KM393_09570 PF01654 Cytochrome bd terminal oxidase subunit I KM393_09575 PF02322 Cytochrome bd terminal oxidase subunit II KM393_09580 PF00664 ABC transporter transmembrane region KM393_09580 PF00005 ABC transporter KM393_09585 PF00005 ABC transporter KM393_09585 PF00664 ABC transporter transmembrane region KM393_09600 PF02016 LD-carboxypeptidase N-terminal domain KM393_09600 PF17676 LD-carboxypeptidase C-terminal domain KM393_09605 PF00768 D-alanyl-D-alanine carboxypeptidase KM393_09605 PF07943 Penicillin-binding protein 5, C-terminal domain KM393_09620 PF00877 NlpC/P60 family KM393_09620 PF01476 LysM domain KM393_09635 PF00486 Transcriptional regulatory protein, C terminal KM393_09635 PF00072 Response regulator receiver domain KM393_09640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_09640 PF00512 His Kinase A (phospho-acceptor) domain KM393_09640 PF00989 PAS fold KM393_09640 PF16736 Single Cache-like KM393_09650 PF00106 short chain dehydrogenase KM393_09660 PF04439 Streptomycin adenylyltransferase KM393_09665 PF01522 Polysaccharide deacetylase KM393_09685 PF01842 ACT domain KM393_09685 PF00742 Homoserine dehydrogenase KM393_09685 PF03447 Homoserine dehydrogenase, NAD binding domain KM393_09690 PF00291 Pyridoxal-phosphate dependent enzyme KM393_09695 PF08544 GHMP kinases C terminal KM393_09695 PF00288 GHMP kinases N terminal domain KM393_09710 PF03816 Cell envelope-related transcriptional attenuator domain KM393_09720 PF00072 Response regulator receiver domain KM393_09720 PF00486 Transcriptional regulatory protein, C terminal KM393_09725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_09725 PF00512 His Kinase A (phospho-acceptor) domain KM393_09725 PF00989 PAS fold KM393_09725 PF16736 Single Cache-like KM393_09730 PF01522 Polysaccharide deacetylase KM393_09740 PF02308 MgtC family KM393_09745 PF00583 Acetyltransferase (GNAT) family KM393_09750 PF06276 Ferric iron reductase FhuF-like transporter KM393_09750 PF04183 IucA / IucC family KM393_09755 PF04183 IucA / IucC family KM393_09755 PF06276 Ferric iron reductase FhuF-like transporter KM393_09760 PF00501 AMP-binding enzyme KM393_09760 PF13193 AMP-binding enzyme C-terminal domain KM393_09775 PF01261 Xylose isomerase-like TIM barrel KM393_09780 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM393_09790 PF01810 LysE type translocator KM393_09800 PF01734 Patatin-like phospholipase KM393_09825 PF00293 NUDIX domain KM393_09825 PF13344 Haloacid dehalogenase-like hydrolase KM393_09830 PF02540 NAD synthase KM393_09840 PF18277 AbrB C-terminal domain KM393_09840 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KM393_09845 PF00082 Subtilase family KM393_09850 PF01022 Bacterial regulatory protein, arsR family KM393_09855 PF00248 Aldo/keto reductase family KM393_09860 PF07690 Major Facilitator Superfamily KM393_09880 PF03193 RsgA GTPase KM393_09885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM393_09885 PF00672 HAMP domain KM393_09885 PF02743 Cache domain KM393_09905 PF00210 Ferritin-like domain KM393_09920 PF00296 Luciferase-like monooxygenase KM393_09930 PF01593 Flavin containing amine oxidoreductase KM393_09940 PF00248 Aldo/keto reductase family KM393_09945 PF02492 CobW/HypB/UreG, nucleotide-binding domain KM393_09945 PF07683 Cobalamin synthesis protein cobW C-terminal domain KM393_09950 PF00583 Acetyltransferase (GNAT) family KM393_10005 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment KM393_10005 PF01297 Zinc-uptake complex component A periplasmic KM393_10015 PF13460 NAD(P)H-binding KM393_10020 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KM393_10025 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KM393_10025 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KM393_10035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM393_10040 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM393_10050 PF00300 Histidine phosphatase superfamily (branch 1) KM393_10060 PF08757 CotH kinase protein KM393_10065 PF00293 NUDIX domain KM393_10070 PF09335 SNARE associated Golgi protein KM393_10075 PF14667 Polysaccharide biosynthesis C-terminal domain KM393_10075 PF01943 Polysaccharide biosynthesis protein KM393_10085 PF03773 Predicted permease KM393_10090 PF09323 Domain of unknown function (DUF1980) KM393_10095 PF03061 Thioesterase superfamily KM393_10105 PF13091 PLD-like domain KM393_10105 PF13396 Phospholipase_D-nuclease N-terminal KM393_10120 PF13460 NAD(P)H-binding KM393_10125 PF04306 Protein of unknown function (DUF456) KM393_10130 PF00571 CBS domain KM393_10130 PF03471 Transporter associated domain KM393_10130 PF01595 Cyclin M transmembrane N-terminal domain KM393_10145 PF05525 Branched-chain amino acid transport protein KM393_10150 PF01588 Putative tRNA binding domain KM393_10170 PF07454 Stage II sporulation protein P (SpoIIP) KM393_10180 PF02557 D-alanyl-D-alanine carboxypeptidase KM393_10190 PF01425 Amidase KM393_10195 PF07690 Major Facilitator Superfamily KM393_10205 PF01145 SPFH domain / Band 7 family KM393_10210 PF00300 Histidine phosphatase superfamily (branch 1) KM393_10225 PF00842 Alanine racemase, C-terminal domain KM393_10225 PF01168 Alanine racemase, N-terminal domain KM393_10230 PF13847 Methyltransferase domain KM393_10245 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase KM393_10250 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM393_10250 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM393_10255 PF00392 Bacterial regulatory proteins, gntR family KM393_10255 PF00155 Aminotransferase class I and II KM393_10280 PF00583 Acetyltransferase (GNAT) family KM393_10330 PF09579 Sporulation protein YtfJ (Spore_YtfJ) KM393_10355 PF01209 ubiE/COQ5 methyltransferase family KM393_10360 PF01268 Formate--tetrahydrofolate ligase KM393_10370 PF00270 DEAD/DEAH box helicase KM393_10370 PF00271 Helicase conserved C-terminal domain KM393_10380 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM393_10390 PF00107 Zinc-binding dehydrogenase KM393_10390 PF08240 Alcohol dehydrogenase GroES-like domain KM393_10395 PF08281 Sigma-70, region 4 KM393_10395 PF04542 Sigma-70 region 2 KM393_10420 PF00255 Glutathione peroxidase KM393_10425 PF11992 Domain of unknown function (DUF3488) KM393_10425 PF13559 Domain of unknown function (DUF4129) KM393_10425 PF01841 Transglutaminase-like superfamily KM393_10430 PF01882 Protein of unknown function DUF58 KM393_10435 PF17863 AAA lid domain KM393_10435 PF07726 ATPase family associated with various cellular activities (AAA) KM393_10450 PF14710 Respiratory nitrate reductase alpha N-terminal KM393_10450 PF00384 Molybdopterin oxidoreductase KM393_10450 PF01568 Molydopterin dinucleotide binding domain KM393_10455 PF13247 4Fe-4S dicluster domain KM393_10455 PF14711 Respiratory nitrate reductase beta C-terminal KM393_10460 PF02613 Nitrate reductase delta subunit KM393_10465 PF02665 Nitrate reductase gamma subunit KM393_10470 PF00155 Aminotransferase class I and II KM393_10470 PF00392 Bacterial regulatory proteins, gntR family KM393_10475 PF00005 ABC transporter KM393_10485 PF00325 Bacterial regulatory proteins, crp family KM393_10485 PF00027 Cyclic nucleotide-binding domain KM393_10490 PF06463 Molybdenum Cofactor Synthesis C KM393_10490 PF04055 Radical SAM superfamily KM393_10495 PF00899 ThiF family KM393_10500 PF03454 MoeA C-terminal region (domain IV) KM393_10500 PF03453 MoeA N-terminal region (domain I and II) KM393_10500 PF00994 Probable molybdopterin binding domain KM393_10505 PF02391 MoaE protein KM393_10515 PF07690 Major Facilitator Superfamily KM393_10535 PF01903 CbiX KM393_10540 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM393_10545 PF00355 Rieske [2Fe-2S] domain KM393_10550 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM393_10550 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KM393_10550 PF18267 Rubredoxin NAD+ reductase C-terminal domain KM393_10550 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KM393_10550 PF04324 BFD-like [2Fe-2S] binding domain KM393_10555 PF01814 Hemerythrin HHE cation binding domain KM393_10555 PF04405 Domain of Unknown function (DUF542) KM393_10590 PF04232 Stage V sporulation protein S (SpoVS) KM393_10605 PF01510 N-acetylmuramoyl-L-alanine amidase KM393_10620 PF01966 HD domain KM393_10625 PF12848 ABC transporter KM393_10625 PF00005 ABC transporter KM393_10625 PF16326 ABC transporter C-terminal domain KM393_10640 PF00436 Single-strand binding protein family KM393_10645 PF00440 Bacterial regulatory proteins, tetR family KM393_10655 PF08712 Scaffold protein Nfu/NifU N terminal KM393_10655 PF13769 Virulence factor KM393_10665 PF06491 Disulphide isomerase KM393_10670 PF04445 Putative SAM-dependent methyltransferase KM393_10675 PF00750 tRNA synthetases class I (R) KM393_10675 PF03485 Arginyl tRNA synthetase N terminal domain KM393_10675 PF05746 DALR anticodon binding domain KM393_10700 PF00133 tRNA synthetases class I (I, L, M and V) KM393_10700 PF08264 Anticodon-binding domain of tRNA KM393_10720 PF00152 tRNA synthetases class II (D, K and N) KM393_10720 PF01336 OB-fold nucleic acid binding domain KM393_10740 PF01580 FtsK/SpoIIIE family KM393_10740 PF12538 DNA transporter KM393_10810 PF01177 Asp/Glu/Hydantoin racemase KM393_10815 PF01980 tRNA-methyltransferase O KM393_10820 PF00583 Acetyltransferase (GNAT) family KM393_10835 PF00005 ABC transporter KM393_10845 PF14005 YpjP-like protein KM393_10850 PF13419 Haloacid dehalogenase-like hydrolase KM393_10870 PF00144 Beta-lactamase KM393_10870 PF07930 D-aminopeptidase, domain B KM393_10875 PF00303 Thymidylate synthase KM393_10880 PF00186 Dihydrofolate reductase KM393_10885 PF00905 Penicillin binding protein transpeptidase domain KM393_10885 PF05223 NTF2-like N-terminal transpeptidase domain KM393_10885 PF03717 Penicillin-binding Protein dimerisation domain KM393_10890 PF02525 Flavodoxin-like fold KM393_10895 PF01553 Acyltransferase KM393_10900 PF03006 Haemolysin-III related KM393_10905 PF02416 mttA/Hcf106 family KM393_10910 PF00902 Sec-independent protein translocase protein (TatC) KM393_10920 PF02645 Uncharacterised protein, DegV family COG1307 KM393_10930 PF02630 SCO1/SenC KM393_10935 PF00011 Hsp20/alpha crystallin family KM393_10940 PF13537 Glutamine amidotransferase domain KM393_10940 PF00733 Asparagine synthase KM393_10955 PF01497 Periplasmic binding protein KM393_10960 PF01063 Amino-transferase class IV KM393_10965 PF00881 Nitroreductase family KM393_10985 PF00293 NUDIX domain KM393_10990 PF00011 Hsp20/alpha crystallin family KM393_10995 PF00924 Mechanosensitive ion channel KM393_11000 PF13185 GAF domain KM393_11000 PF07730 Histidine kinase KM393_11005 PF00072 Response regulator receiver domain KM393_11005 PF00196 Bacterial regulatory proteins, luxR family KM393_11015 PF08240 Alcohol dehydrogenase GroES-like domain KM393_11015 PF00107 Zinc-binding dehydrogenase KM393_11040 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM393_11040 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM393_11045 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM393_11045 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM393_11060 PF03358 NADPH-dependent FMN reductase KM393_11075 PF00005 ABC transporter KM393_11075 PF00571 CBS domain KM393_11080 PF00528 Binding-protein-dependent transport system inner membrane component KM393_11085 PF13520 Amino acid permease KM393_11120 PF00171 Aldehyde dehydrogenase family KM393_11125 PF07997 Protein of unknown function (DUF1694) KM393_11130 PF09385 Histidine kinase N terminal KM393_11140 PF00202 Aminotransferase class-III KM393_11145 PF01144 Coenzyme A transferase KM393_11150 PF01144 Coenzyme A transferase KM393_11155 PF07687 Peptidase dimerisation domain KM393_11155 PF01546 Peptidase family M20/M25/M40 KM393_11160 PF00583 Acetyltransferase (GNAT) family KM393_11165 PF00158 Sigma-54 interaction domain KM393_11165 PF13426 PAS domain KM393_11165 PF02954 Bacterial regulatory protein, Fis family KM393_11170 PF12544 Lysine-2,3-aminomutase KM393_11175 PF14122 YokU-like protein, putative antitoxin KM393_11180 PF06855 YozE SAM-like fold KM393_11195 PF14162 YozD-like protein KM393_11210 PF07070 SpoOM protein KM393_11215 PF01569 PAP2 superfamily KM393_11220 PF16916 Dimerisation domain of Zinc Transporter KM393_11220 PF01545 Cation efflux family KM393_11225 PF00085 Thioredoxin KM393_11240 PF14436 Bacterial EndoU nuclease KM393_11240 PF04740 LXG domain of WXG superfamily KM393_11245 PF03424 Carbohydrate binding domain (family 17/28) KM393_11245 PF00150 Cellulase (glycosyl hydrolase family 5) KM393_11245 PF00395 S-layer homology domain KM393_11255 PF04471 Restriction endonuclease KM393_11365 PF10676 Spore germination protein gerPA/gerPF KM393_11385 PF00905 Penicillin binding protein transpeptidase domain KM393_11385 PF00912 Transglycosylase KM393_11390 PF07690 Major Facilitator Superfamily KM393_11395 PF01521 Iron-sulphur cluster biosynthesis KM393_11400 PF00285 Citrate synthase, C-terminal domain KM393_11405 PF03972 MmgE/PrpD family KM393_11415 PF02770 Acyl-CoA dehydrogenase, middle domain KM393_11415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM393_11415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM393_11420 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KM393_11420 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM393_11425 PF00171 Aldehyde dehydrogenase family KM393_11430 PF01810 LysE type translocator KM393_11435 PF00378 Enoyl-CoA hydratase/isomerase KM393_11445 PF10763 Protein of unknown function (DUF2584) KM393_11450 PF00149 Calcineurin-like phosphoesterase KM393_11450 PF12320 Type 5 capsule protein repressor C-terminal domain KM393_11455 PF13476 AAA domain KM393_11465 PF01022 Bacterial regulatory protein, arsR family KM393_11475 PF07690 Major Facilitator Superfamily KM393_11480 PF00106 short chain dehydrogenase KM393_11485 PF00425 chorismate binding enzyme KM393_11490 PF00501 AMP-binding enzyme KM393_11490 PF13193 AMP-binding enzyme C-terminal domain KM393_11495 PF00857 Isochorismatase family KM393_11495 PF00550 Phosphopantetheine attachment site KM393_11500 PF00501 AMP-binding enzyme KM393_11500 PF13193 AMP-binding enzyme C-terminal domain KM393_11500 PF00668 Condensation domain KM393_11500 PF00550 Phosphopantetheine attachment site KM393_11500 PF00975 Thioesterase domain KM393_11505 PF03621 MbtH-like protein KM393_11510 PF07690 Major Facilitator Superfamily KM393_11525 PF00216 Bacterial DNA-binding protein KM393_11535 PF05163 DinB family KM393_11540 PF00082 Subtilase family KM393_11545 PF01235 Sodium:alanine symporter family KM393_11560 PF16291 Domain of unknown function (DUF4937 KM393_11565 PF00849 RNA pseudouridylate synthase KM393_11565 PF01479 S4 domain KM393_11570 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM393_11570 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM393_11570 PF02824 TGS domain KM393_11570 PF03129 Anticodon binding domain KM393_11585 PF12146 Serine aminopeptidase, S33 KM393_11590 PF07690 Major Facilitator Superfamily KM393_11610 PF13649 Methyltransferase domain KM393_11655 PF16123 Hydroxyacylglutathione hydrolase C-terminus KM393_11655 PF00753 Metallo-beta-lactamase superfamily KM393_11665 PF03176 MMPL family KM393_11675 PF00302 Chloramphenicol acetyltransferase KM393_11690 PF00583 Acetyltransferase (GNAT) family KM393_11720 PF01593 Flavin containing amine oxidoreductase KM393_11730 PF13302 Acetyltransferase (GNAT) domain KM393_11740 PF00313 'Cold-shock' DNA-binding domain KM393_11765 PF00005 ABC transporter KM393_11765 PF00664 ABC transporter transmembrane region KM393_11780 PF01810 LysE type translocator KM393_11785 PF07883 Cupin domain KM393_11785 PF01381 Helix-turn-helix KM393_11810 PF00890 FAD binding domain KM393_11815 PF04542 Sigma-70 region 2 KM393_11815 PF08281 Sigma-70, region 4 KM393_11815 PF12680 SnoaL-like domain KM393_11840 PF02638 Glycosyl hydrolase-like 10 KM393_11850 PF02378 Phosphotransferase system, EIIC KM393_11860 PF03702 Anhydro-N-acetylmuramic acid kinase KM393_11865 PF01869 BadF/BadG/BcrA/BcrD ATPase family KM393_11870 PF02660 Glycerol-3-phosphate acyltransferase KM393_11875 PF00266 Aminotransferase class-V KM393_11880 PF00291 Pyridoxal-phosphate dependent enzyme KM393_11895 PF16123 Hydroxyacylglutathione hydrolase C-terminus KM393_11895 PF00753 Metallo-beta-lactamase superfamily KM393_11910 PF00270 DEAD/DEAH box helicase KM393_11910 PF00271 Helicase conserved C-terminal domain KM393_11925 PF17932 Tetracyclin repressor-like, C-terminal domain KM393_11925 PF00440 Bacterial regulatory proteins, tetR family KM393_11940 PF00005 ABC transporter KM393_11940 PF02687 FtsX-like permease family KM393_11940 PF12704 MacB-like periplasmic core domain KM393_11945 PF09313 Domain of unknown function (DUF1971) KM393_11945 PF03848 Tellurite resistance protein TehB KM393_11955 PF08241 Methyltransferase domain KM393_11960 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM393_11960 PF00205 Thiamine pyrophosphate enzyme, central domain KM393_11960 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM393_11965 PF12802 MarR family KM393_11970 PF00300 Histidine phosphatase superfamily (branch 1) KM393_11975 PF14171 Toxin SpoIISA, type II toxin-antitoxin system KM393_12005 PF07687 Peptidase dimerisation domain KM393_12005 PF01546 Peptidase family M20/M25/M40 KM393_12020 PF08281 Sigma-70, region 4 KM393_12020 PF04542 Sigma-70 region 2 KM393_12030 PF03717 Penicillin-binding Protein dimerisation domain KM393_12030 PF00905 Penicillin binding protein transpeptidase domain KM393_12045 PF01569 PAP2 superfamily KM393_12050 PF00356 Bacterial regulatory proteins, lacI family KM393_12055 PF07690 Major Facilitator Superfamily KM393_12060 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KM393_12060 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM393_12065 PF00294 pfkB family carbohydrate kinase KM393_12070 PF00171 Aldehyde dehydrogenase family KM393_12075 PF00205 Thiamine pyrophosphate enzyme, central domain KM393_12075 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM393_12075 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM393_12080 PF01261 Xylose isomerase-like TIM barrel KM393_12085 PF01116 Fructose-bisphosphate aldolase class-II KM393_12090 PF04962 KduI/IolB family KM393_12115 PF18801 response regulator aspartate phosphatase H, N terminal KM393_12120 PF01381 Helix-turn-helix KM393_12135 PF02557 D-alanyl-D-alanine carboxypeptidase KM393_12145 PF01520 N-acetylmuramoyl-L-alanine amidase KM393_12145 PF00395 S-layer homology domain KM393_12155 PF00440 Bacterial regulatory proteins, tetR family KM393_12160 PF00005 ABC transporter KM393_12160 PF16326 ABC transporter C-terminal domain KM393_12170 PF00990 Diguanylate cyclase, GGDEF domain KM393_12170 PF00563 EAL domain KM393_12170 PF03707 Bacterial signalling protein N terminal repeat KM393_12175 PF13302 Acetyltransferase (GNAT) domain KM393_12190 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM393_12195 PF00581 Rhodanese-like domain KM393_12210 PF00005 ABC transporter KM393_12220 PF08359 YsiA-like protein, C-terminal region KM393_12220 PF00440 Bacterial regulatory proteins, tetR family KM393_12235 PF02770 Acyl-CoA dehydrogenase, middle domain KM393_12235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM393_12235 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM393_12240 PF02785 Biotin carboxylase C-terminal domain KM393_12240 PF00289 Biotin carboxylase, N-terminal domain KM393_12240 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM393_12245 PF00364 Biotin-requiring enzyme KM393_12250 PF00682 HMGL-like KM393_12255 PF00378 Enoyl-CoA hydratase/isomerase KM393_12260 PF01039 Carboxyl transferase domain KM393_12265 PF16177 Acetyl-coenzyme A synthetase N-terminus KM393_12265 PF00501 AMP-binding enzyme KM393_12265 PF13193 AMP-binding enzyme C-terminal domain KM393_12275 PF00583 Acetyltransferase (GNAT) family KM393_12280 PF00485 Phosphoribulokinase / Uridine kinase family KM393_12290 PF05163 DinB family KM393_12295 PF07943 Penicillin-binding protein 5, C-terminal domain KM393_12295 PF00768 D-alanyl-D-alanine carboxypeptidase KM393_12300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_12300 PF00512 His Kinase A (phospho-acceptor) domain KM393_12305 PF00486 Transcriptional regulatory protein, C terminal KM393_12305 PF00072 Response regulator receiver domain KM393_12310 PF01966 HD domain KM393_12315 PF13021 Domain of unknown function (DUF3885) KM393_12320 PF01048 Phosphorylase superfamily KM393_12360 PF17755 UvrA DNA-binding domain KM393_12360 PF17760 UvrA interaction domain KM393_12360 PF17755 UvrA DNA-binding domain KM393_12360 PF17760 UvrA interaction domain KM393_12375 PF00144 Beta-lactamase KM393_12380 PF00376 MerR family regulatory protein KM393_12380 PF09278 MerR, DNA binding KM393_12385 PF07690 Major Facilitator Superfamily KM393_12405 PF01636 Phosphotransferase enzyme family KM393_12410 PF12833 Helix-turn-helix domain KM393_12425 PF00155 Aminotransferase class I and II KM393_12425 PF00392 Bacterial regulatory proteins, gntR family KM393_12440 PF00107 Zinc-binding dehydrogenase KM393_12440 PF08240 Alcohol dehydrogenase GroES-like domain KM393_12470 PF07486 Cell Wall Hydrolase KM393_12480 PF00486 Transcriptional regulatory protein, C terminal KM393_12480 PF00072 Response regulator receiver domain KM393_12495 PF00005 ABC transporter KM393_12495 PF12848 ABC transporter KM393_12510 PF00005 ABC transporter KM393_12535 PF03447 Homoserine dehydrogenase, NAD binding domain KM393_12535 PF01842 ACT domain KM393_12535 PF00742 Homoserine dehydrogenase KM393_12540 PF00155 Aminotransferase class I and II KM393_12540 PF00392 Bacterial regulatory proteins, gntR family KM393_12545 PF07478 D-ala D-ala ligase C-terminus KM393_12545 PF01820 D-ala D-ala ligase N-terminus KM393_12550 PF03070 TENA/THI-4/PQQC family KM393_12615 PF00067 Cytochrome P450 KM393_12625 PF00132 Bacterial transferase hexapeptide (six repeats) KM393_12630 PF07561 Domain of Unknown Function (DUF1540) KM393_12640 PF00067 Cytochrome P450 KM393_12660 PF13426 PAS domain KM393_12660 PF00989 PAS fold KM393_12660 PF13188 PAS domain KM393_12660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_12660 PF00512 His Kinase A (phospho-acceptor) domain KM393_12665 PF03717 Penicillin-binding Protein dimerisation domain KM393_12665 PF00905 Penicillin binding protein transpeptidase domain KM393_12670 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase KM393_12675 PF01177 Asp/Glu/Hydantoin racemase KM393_12680 PF07155 ECF-type riboflavin transporter, S component KM393_12685 PF12558 ATP-binding cassette cobalt transporter KM393_12685 PF00005 ABC transporter KM393_12700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_12700 PF00512 His Kinase A (phospho-acceptor) domain KM393_12710 PF04229 GrpB protein KM393_12715 PF08240 Alcohol dehydrogenase GroES-like domain KM393_12715 PF00107 Zinc-binding dehydrogenase KM393_12720 PF03793 PASTA domain KM393_12720 PF03717 Penicillin-binding Protein dimerisation domain KM393_12720 PF00905 Penicillin binding protein transpeptidase domain KM393_12730 PF00144 Beta-lactamase KM393_12730 PF11954 Domain of unknown function (DUF3471) KM393_12765 PF01965 DJ-1/PfpI family KM393_12780 PF00144 Beta-lactamase KM393_12795 PF07690 Major Facilitator Superfamily KM393_12810 PF03009 Glycerophosphoryl diester phosphodiesterase family KM393_12830 PF00892 EamA-like transporter family KM393_12835 PF01270 Glycosyl hydrolases family 8 KM393_12845 PF00293 NUDIX domain KM393_12855 PF00144 Beta-lactamase KM393_12865 PF07690 Major Facilitator Superfamily KM393_12880 PF00293 NUDIX domain KM393_12880 PF09297 NADH pyrophosphatase zinc ribbon domain KM393_12885 PF00712 DNA polymerase III beta subunit, N-terminal domain KM393_12885 PF02768 DNA polymerase III beta subunit, C-terminal domain KM393_12885 PF02767 DNA polymerase III beta subunit, central domain KM393_12890 PF00293 NUDIX domain KM393_12905 PF12706 Beta-lactamase superfamily domain KM393_12925 PF09234 Domain of unknown function (DUF1963) KM393_12960 PF12867 DinB superfamily KM393_12975 PF02673 Bacitracin resistance protein BacA KM393_12985 PF01541 GIY-YIG catalytic domain KM393_13025 PF01266 FAD dependent oxidoreductase KM393_13050 PF13419 Haloacid dehalogenase-like hydrolase KM393_13070 PF00282 Pyridoxal-dependent decarboxylase conserved domain KM393_13075 PF00550 Phosphopantetheine attachment site KM393_13075 PF00668 Condensation domain KM393_13075 PF00501 AMP-binding enzyme KM393_13075 PF13193 AMP-binding enzyme C-terminal domain KM393_13085 PF03714 Bacterial pullanase-associated domain KM393_13085 PF00128 Alpha amylase, catalytic domain KM393_13085 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KM393_13090 PF07504 Fungalysin/Thermolysin Propeptide Motif KM393_13090 PF03413 Peptidase propeptide and YPEB domain KM393_13090 PF01447 Thermolysin metallopeptidase, catalytic domain KM393_13090 PF02868 Thermolysin metallopeptidase, alpha-helical domain KM393_13110 PF00344 SecY translocase KM393_13115 PF00308 Bacterial dnaA protein KM393_13115 PF08299 Bacterial dnaA protein helix-turn-helix KM393_13115 PF11638 DnaA N-terminal domain KM393_13120 PF00892 EamA-like transporter family KM393_13125 PF00392 Bacterial regulatory proteins, gntR family KM393_13125 PF00155 Aminotransferase class I and II KM393_13130 PF00561 alpha/beta hydrolase fold KM393_13155 PF06081 Aromatic acid exporter family member 1 KM393_13170 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) KM393_13175 PF03413 Peptidase propeptide and YPEB domain KM393_13175 PF14620 YpeB sporulation KM393_13180 PF01471 Putative peptidoglycan binding domain KM393_13180 PF07486 Cell Wall Hydrolase KM393_13195 PF03301 Tryptophan 2,3-dioxygenase KM393_13200 PF04199 Putative cyclase KM393_13205 PF00266 Aminotransferase class-V KM393_13210 PF00440 Bacterial regulatory proteins, tetR family KM393_13210 PF08359 YsiA-like protein, C-terminal region KM393_13215 PF13344 Haloacid dehalogenase-like hydrolase KM393_13215 PF00293 NUDIX domain KM393_13240 PF01590 GAF domain KM393_13240 PF02954 Bacterial regulatory protein, Fis family KM393_13240 PF00158 Sigma-54 interaction domain KM393_13255 PF13302 Acetyltransferase (GNAT) domain KM393_13260 PF00455 DeoR C terminal sensor domain KM393_13260 PF08220 DeoR-like helix-turn-helix domain KM393_13275 PF00403 Heavy-metal-associated domain KM393_13275 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM393_13275 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM393_13280 PF02082 Transcriptional regulator KM393_13295 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM393_13295 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM393_13300 PF02817 e3 binding domain KM393_13300 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM393_13300 PF00364 Biotin-requiring enzyme KM393_13305 PF02779 Transketolase, pyrimidine binding domain KM393_13305 PF02780 Transketolase, C-terminal domain KM393_13310 PF00676 Dehydrogenase E1 component KM393_13320 PF00106 short chain dehydrogenase KM393_13325 PF13673 Acetyltransferase (GNAT) domain KM393_13325 PF04229 GrpB protein KM393_13355 PF00528 Binding-protein-dependent transport system inner membrane component KM393_13360 PF00005 ABC transporter KM393_13360 PF00571 CBS domain KM393_13365 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KM393_13370 PF00574 Clp protease KM393_13385 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KM393_13390 PF13673 Acetyltransferase (GNAT) domain KM393_13395 PF18416 N-acetylglucosamine binding protein domain 2 KM393_13395 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading KM393_13410 PF10990 Protein of unknown function (DUF2809) KM393_13435 PF00753 Metallo-beta-lactamase superfamily KM393_13435 PF13567 Domain of unknown function (DUF4131) KM393_13435 PF03772 Competence protein KM393_13485 PF13538 UvrD-like helicase C-terminal domain KM393_13500 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like KM393_13505 PF00270 DEAD/DEAH box helicase KM393_13505 PF09382 RQC domain KM393_13505 PF00271 Helicase conserved C-terminal domain KM393_13505 PF16124 RecQ zinc-binding KM393_13505 PF00570 HRDC domain KM393_13545 PF01368 DHH family KM393_13545 PF02833 DHHA2 domain KM393_13550 PF18416 N-acetylglucosamine binding protein domain 2 KM393_13550 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading KM393_13565 PF02627 Carboxymuconolactone decarboxylase family KM393_13570 PF01235 Sodium:alanine symporter family KM393_13575 PF00171 Aldehyde dehydrogenase family KM393_13580 PF00701 Dihydrodipicolinate synthetase family KM393_13585 PF05544 Proline racemase KM393_13590 PF05544 Proline racemase KM393_13595 PF01266 FAD dependent oxidoreductase KM393_13600 PF00158 Sigma-54 interaction domain KM393_13600 PF02954 Bacterial regulatory protein, Fis family KM393_13600 PF13188 PAS domain KM393_13615 PF04324 BFD-like [2Fe-2S] binding domain KM393_13615 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM393_13630 PF08876 Domain of unknown function (DUF1836) KM393_13635 PF09335 SNARE associated Golgi protein KM393_13650 PF04914 DltD protein KM393_13655 PF00958 GMP synthase C terminal domain KM393_13655 PF00117 Glutamine amidotransferase class-I KM393_13655 PF03352 Methyladenine glycosylase KM393_13655 PF13302 Acetyltransferase (GNAT) domain KM393_13655 PF13673 Acetyltransferase (GNAT) domain KM393_13660 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM393_13665 PF00877 NlpC/P60 family KM393_13665 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain KM393_13670 PF13378 Enolase C-terminal domain-like KM393_13670 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KM393_13690 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM393_13715 PF02129 X-Pro dipeptidyl-peptidase (S15 family) KM393_13715 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain KM393_13720 PF00512 His Kinase A (phospho-acceptor) domain KM393_13720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_13720 PF16736 Single Cache-like KM393_13720 PF00989 PAS fold KM393_13745 PF01048 Phosphorylase superfamily KM393_13755 PF03808 Glycosyl transferase WecB/TagA/CpsF family KM393_13760 PF01432 Peptidase family M3 KM393_13760 PF08439 Oligopeptidase F KM393_13775 PF02645 Uncharacterised protein, DegV family COG1307 KM393_13795 PF07690 Major Facilitator Superfamily KM393_13805 PF04519 Polymer-forming cytoskeletal KM393_13810 PF13171 Protein of unknown function (DUF4004) KM393_13815 PF12793 Sugar transport-related sRNA regulator N-term KM393_13815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM393_13820 PF07690 Major Facilitator Superfamily KM393_13840 PF04226 Transglycosylase associated protein KM393_13845 PF01156 Inosine-uridine preferring nucleoside hydrolase KM393_13855 PF08241 Methyltransferase domain KM393_13890 PF00155 Aminotransferase class I and II KM393_13895 PF07977 FabA-like domain KM393_13900 PF03630 Fumble KM393_13920 PF00005 ABC transporter KM393_13960 PF01594 AI-2E family transporter KM393_13970 PF00296 Luciferase-like monooxygenase KM393_13975 PF00528 Binding-protein-dependent transport system inner membrane component KM393_13980 PF09084 NMT1/THI5 like KM393_13985 PF00005 ABC transporter KM393_14005 PF09297 NADH pyrophosphatase zinc ribbon domain KM393_14005 PF00293 NUDIX domain KM393_14025 PF02522 Aminoglycoside 3-N-acetyltransferase KM393_14050 PF13536 Putative multidrug resistance efflux transporter KM393_14055 PF12867 DinB superfamily KM393_14075 PF08713 DNA alkylation repair enzyme KM393_14085 PF01522 Polysaccharide deacetylase KM393_14095 PF03741 Integral membrane protein TerC family KM393_14100 PF00884 Sulfatase KM393_14105 PF12848 ABC transporter KM393_14105 PF00005 ABC transporter KM393_14115 PF03176 MMPL family KM393_14120 PF03176 MMPL family KM393_14125 PF03176 MMPL family KM393_14130 PF16295 Tetracyclin repressor-like, C-terminal domain KM393_14130 PF00440 Bacterial regulatory proteins, tetR family KM393_14140 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KM393_14145 PF02153 Prephenate dehydrogenase KM393_14145 PF01842 ACT domain KM393_14150 PF00155 Aminotransferase class I and II KM393_14155 PF01264 Chorismate synthase KM393_14160 PF00793 DAHP synthetase I family KM393_14160 PF01817 Chorismate mutase type II KM393_14180 PF01636 Phosphotransferase enzyme family KM393_14195 PF06725 3D domain KM393_14195 PF01476 LysM domain KM393_14205 PF08281 Sigma-70, region 4 KM393_14205 PF04542 Sigma-70 region 2 KM393_14225 PF06039 Malate:quinone oxidoreductase (Mqo) KM393_14230 PF13407 Periplasmic binding protein domain KM393_14235 PF02653 Branched-chain amino acid transport system / permease component KM393_14240 PF02653 Branched-chain amino acid transport system / permease component KM393_14245 PF00005 ABC transporter KM393_14250 PF00325 Bacterial regulatory proteins, crp family KM393_14250 PF04198 Putative sugar-binding domain KM393_14265 PF01791 DeoC/LacD family aldolase KM393_14285 PF03992 Antibiotic biosynthesis monooxygenase KM393_14310 PF00171 Aldehyde dehydrogenase family KM393_14315 PF01472 PUA domain KM393_14315 PF00696 Amino acid kinase family KM393_14320 PF03807 NADP oxidoreductase coenzyme F420-dependent KM393_14320 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM393_14325 PF01546 Peptidase family M20/M25/M40 KM393_14330 PF09339 IclR helix-turn-helix domain KM393_14330 PF01614 Bacterial transcriptional regulator KM393_14335 PF00324 Amino acid permease KM393_14340 PF01139 tRNA-splicing ligase RtcB KM393_14345 PF00487 Fatty acid desaturase KM393_14350 PF00245 Alkaline phosphatase KM393_14355 PF11188 Protein of unknown function (DUF2975) KM393_14360 PF13443 Cro/C1-type HTH DNA-binding domain KM393_14375 PF10086 YhfC intramembrane metalloprotease KM393_14385 PF04397 LytTr DNA-binding domain KM393_14385 PF00072 Response regulator receiver domain KM393_14395 PF13302 Acetyltransferase (GNAT) domain KM393_14400 PF12681 Glyoxalase-like domain KM393_14420 PF07726 ATPase family associated with various cellular activities (AAA) KM393_14420 PF17863 AAA lid domain KM393_14435 PF07690 Major Facilitator Superfamily KM393_14445 PF00535 Glycosyl transferase family 2 KM393_14460 PF00535 Glycosyl transferase family 2 KM393_14470 PF00535 Glycosyl transferase family 2 KM393_14480 PF00202 Aminotransferase class-III KM393_14485 PF00199 Catalase KM393_14485 PF06628 Catalase-related immune-responsive KM393_14495 PF13382 Adenine deaminase C-terminal domain KM393_14495 PF01979 Amidohydrolase family KM393_14500 PF00144 Beta-lactamase KM393_14520 PF07726 ATPase family associated with various cellular activities (AAA) KM393_14520 PF17863 AAA lid domain KM393_14530 PF00881 Nitroreductase family KM393_14535 PF01047 MarR family KM393_14540 PF00009 Elongation factor Tu GTP binding domain KM393_14540 PF03764 Elongation factor G, domain IV KM393_14540 PF14492 Elongation Factor G, domain II KM393_14540 PF00679 Elongation factor G C-terminus KM393_14550 PF00293 NUDIX domain KM393_14565 PF00005 ABC transporter KM393_14570 PF00392 Bacterial regulatory proteins, gntR family KM393_14580 PF12704 MacB-like periplasmic core domain KM393_14580 PF00005 ABC transporter KM393_14580 PF02687 FtsX-like permease family KM393_14605 PF12833 Helix-turn-helix domain KM393_14610 PF00583 Acetyltransferase (GNAT) family KM393_14625 PF00892 EamA-like transporter family KM393_14630 PF00392 Bacterial regulatory proteins, gntR family KM393_14630 PF00155 Aminotransferase class I and II KM393_14635 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 KM393_14640 PF13031 Protein of unknown function (DUF3892) KM393_14650 PF00672 HAMP domain KM393_14650 PF00512 His Kinase A (phospho-acceptor) domain KM393_14655 PF00072 Response regulator receiver domain KM393_14655 PF00486 Transcriptional regulatory protein, C terminal KM393_14660 PF00561 alpha/beta hydrolase fold KM393_14690 PF01925 Sulfite exporter TauE/SafE KM393_14695 PF13302 Acetyltransferase (GNAT) domain KM393_14700 PF00324 Amino acid permease KM393_14710 PF08713 DNA alkylation repair enzyme KM393_14715 PF10898 Protein of unknown function (DUF2716) KM393_14735 PF00293 NUDIX domain KM393_14745 PF10502 Signal peptidase, peptidase S26 KM393_14750 PF00905 Penicillin binding protein transpeptidase domain KM393_14750 PF03717 Penicillin-binding Protein dimerisation domain KM393_14760 PF02146 Sir2 family KM393_14765 PF01470 Pyroglutamyl peptidase KM393_14785 PF03746 LamB/YcsF family KM393_14790 PF02626 Carboxyltransferase domain, subdomain A and B KM393_14795 PF02682 Carboxyltransferase domain, subdomain C and D KM393_14800 PF09339 IclR helix-turn-helix domain KM393_14800 PF01614 Bacterial transcriptional regulator KM393_14805 PF10502 Signal peptidase, peptidase S26 KM393_14810 PF03932 CutC family KM393_14815 PF07454 Stage II sporulation protein P (SpoIIP) KM393_14830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM393_14830 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KM393_14830 PF02770 Acyl-CoA dehydrogenase, middle domain KM393_14845 PF07670 Nucleoside recognition KM393_14860 PF02915 Rubrerythrin KM393_14870 PF00440 Bacterial regulatory proteins, tetR family KM393_14875 PF00391 PEP-utilising enzyme, mobile domain KM393_14875 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KM393_14880 PF00753 Metallo-beta-lactamase superfamily KM393_14895 PF07875 Coat F domain KM393_14900 PF08892 YqcI/YcgG family KM393_14905 PF01810 LysE type translocator KM393_14920 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM393_14925 PF10710 Protein of unknown function (DUF2512) KM393_14930 PF11553 Protein of unknown function (DUF3231) KM393_14935 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM393_14940 PF13823 Alcohol dehydrogenase GroES-associated KM393_14940 PF08240 Alcohol dehydrogenase GroES-like domain KM393_14940 PF00107 Zinc-binding dehydrogenase KM393_14955 PF00206 Lyase KM393_14955 PF10415 Fumarase C C-terminus KM393_14960 PF17763 Glutaminase/Asparaginase C-terminal domain KM393_14960 PF00710 Asparaginase, N-terminal KM393_14965 PF01381 Helix-turn-helix KM393_14975 PF01541 GIY-YIG catalytic domain KM393_14975 PF02151 UvrB/uvrC motif KM393_14975 PF08459 UvrC Helix-hairpin-helix N-terminal KM393_14975 PF12826 Helix-hairpin-helix motif KM393_14980 PF13520 Amino acid permease KM393_14985 PF05525 Branched-chain amino acid transport protein KM393_14990 PF03807 NADP oxidoreductase coenzyme F420-dependent KM393_14990 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM393_14995 PF13564 DoxX-like family KM393_15000 PF03949 Malic enzyme, NAD binding domain KM393_15000 PF00390 Malic enzyme, N-terminal domain KM393_15015 PF03845 Spore germination protein KM393_15025 PF08664 YcbB domain KM393_15025 PF00072 Response regulator receiver domain KM393_15035 PF04960 Glutaminase KM393_15040 PF01235 Sodium:alanine symporter family KM393_15070 PF00149 Calcineurin-like phosphoesterase KM393_15070 PF17936 Bacterial Ig domain KM393_15070 PF02872 5'-nucleotidase, C-terminal domain KM393_15075 PF06628 Catalase-related immune-responsive KM393_15075 PF00199 Catalase KM393_15080 PF00561 alpha/beta hydrolase fold KM393_15085 PF00857 Isochorismatase family KM393_15105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM393_15105 PF03466 LysR substrate binding domain KM393_15110 PF01047 MarR family KM393_15130 PF11181 Heat induced stress protein YflT KM393_15145 PF03073 TspO/MBR family KM393_15150 PF00875 DNA photolyase KM393_15150 PF03441 FAD binding domain of DNA photolyase KM393_15160 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) KM393_15165 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KM393_15165 PF00361 Proton-conducting membrane transporter KM393_15170 PF10057 Uncharacterized conserved protein (DUF2294) KM393_15185 PF01040 UbiA prenyltransferase family KM393_15190 PF00561 alpha/beta hydrolase fold KM393_15195 PF01297 Zinc-uptake complex component A periplasmic KM393_15200 PF00950 ABC 3 transport family KM393_15205 PF00005 ABC transporter KM393_15230 PF01451 Low molecular weight phosphotyrosine protein phosphatase KM393_15235 PF01758 Sodium Bile acid symporter family KM393_15240 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM393_15245 PF01022 Bacterial regulatory protein, arsR family KM393_15260 PF00012 Hsp70 protein KM393_15275 PF01037 Lrp/AsnC ligand binding domain KM393_15290 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM393_15315 PF02805 Metal binding domain of Ada KM393_15315 PF12833 Helix-turn-helix domain KM393_15325 PF00144 Beta-lactamase KM393_15350 PF12802 MarR family KM393_15355 PF00667 FAD binding domain KM393_15355 PF00258 Flavodoxin KM393_15355 PF00175 Oxidoreductase NAD-binding domain KM393_15355 PF00067 Cytochrome P450 KM393_15360 PF07690 Major Facilitator Superfamily KM393_15385 PF00072 Response regulator receiver domain KM393_15385 PF00486 Transcriptional regulatory protein, C terminal KM393_15390 PF00512 His Kinase A (phospho-acceptor) domain KM393_15390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_15390 PF00672 HAMP domain KM393_15415 PF00291 Pyridoxal-phosphate dependent enzyme KM393_15435 PF01381 Helix-turn-helix KM393_15450 PF00753 Metallo-beta-lactamase superfamily KM393_15455 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family KM393_15465 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM393_15465 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM393_15470 PF04072 Leucine carboxyl methyltransferase KM393_15485 PF00005 ABC transporter KM393_15490 PF02687 FtsX-like permease family KM393_15505 PF00672 HAMP domain KM393_15505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_15505 PF00512 His Kinase A (phospho-acceptor) domain KM393_15510 PF00072 Response regulator receiver domain KM393_15510 PF00486 Transcriptional regulatory protein, C terminal KM393_15520 PF01047 MarR family KM393_15530 PF04299 Putative FMN-binding domain KM393_15535 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM393_15535 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM393_15540 PF07690 Major Facilitator Superfamily KM393_15545 PF02589 LUD domain KM393_15550 PF02589 LUD domain KM393_15550 PF11870 Domain of unknown function (DUF3390) KM393_15550 PF13183 4Fe-4S dicluster domain KM393_15555 PF02754 Cysteine-rich domain KM393_15560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM393_15560 PF03466 LysR substrate binding domain KM393_15570 PF17676 LD-carboxypeptidase C-terminal domain KM393_15570 PF02016 LD-carboxypeptidase N-terminal domain KM393_15590 PF07690 Major Facilitator Superfamily KM393_15595 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KM393_15595 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM393_15600 PF05116 Sucrose-6F-phosphate phosphohydrolase KM393_15610 PF00356 Bacterial regulatory proteins, lacI family KM393_15615 PF18801 response regulator aspartate phosphatase H, N terminal KM393_15635 PF00817 impB/mucB/samB family KM393_15635 PF11799 impB/mucB/samB family C-terminal domain KM393_15635 PF11798 IMS family HHH motif KM393_15650 PF02743 Cache domain KM393_15650 PF00672 HAMP domain KM393_15650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM393_15665 PF01554 MatE KM393_15675 PF18496 Collagenase G catalytic helper subdomain KM393_15675 PF01752 Collagenase KM393_15675 PF08453 Peptidase family M9 N-terminal KM393_15685 PF07690 Major Facilitator Superfamily KM393_15690 PF16859 Tetracyclin repressor-like, C-terminal domain KM393_15690 PF00440 Bacterial regulatory proteins, tetR family KM393_15700 PF01022 Bacterial regulatory protein, arsR family KM393_15710 PF03313 Serine dehydratase alpha chain KM393_15715 PF01842 ACT domain KM393_15715 PF03315 Serine dehydratase beta chain KM393_15725 PF00202 Aminotransferase class-III KM393_15730 PF17788 HypF Kae1-like domain KM393_15730 PF01300 Telomere recombination KM393_15730 PF07503 HypF finger KM393_15730 PF00708 Acylphosphatase KM393_15735 PF00586 AIR synthase related protein, N-terminal domain KM393_15735 PF02769 AIR synthase related protein, C-terminal domain KM393_15740 PF00857 Isochorismatase family KM393_15745 PF01037 Lrp/AsnC ligand binding domain KM393_15750 PF13520 Amino acid permease KM393_15765 PF01842 ACT domain KM393_15765 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KM393_15765 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KM393_15770 PF00266 Aminotransferase class-V KM393_15785 PF08281 Sigma-70, region 4 KM393_15785 PF04542 Sigma-70 region 2 KM393_15800 PF07883 Cupin domain KM393_15805 PF01497 Periplasmic binding protein KM393_15805 PF12833 Helix-turn-helix domain KM393_15810 PF01804 Penicillin amidase KM393_15850 PF14044 NETI protein KM393_15855 PF07690 Major Facilitator Superfamily KM393_15860 PF12697 Alpha/beta hydrolase family KM393_15865 PF01047 MarR family KM393_15870 PF07690 Major Facilitator Superfamily KM393_15880 PF12679 ABC-2 family transporter protein KM393_15885 PF13732 Domain of unknown function (DUF4162) KM393_15885 PF00005 ABC transporter KM393_15890 PF13396 Phospholipase_D-nuclease N-terminal KM393_15900 PF17314 Family of unknown function (DUF5360) KM393_15905 PF00893 Small Multidrug Resistance protein KM393_15910 PF00440 Bacterial regulatory proteins, tetR family KM393_15915 PF01289 Thiol-activated cytolysin KM393_15915 PF17440 Thiol-activated cytolysin beta sandwich domain KM393_15920 PF02667 Short chain fatty acid transporter KM393_15930 PF02525 Flavodoxin-like fold KM393_15950 PF14256 YwiC-like protein KM393_15960 PF00005 ABC transporter KM393_15965 PF02361 Cobalt transport protein KM393_15980 PF03737 Aldolase/RraA KM393_15985 PF03606 C4-dicarboxylate anaerobic carrier KM393_15990 PF04231 Endonuclease I KM393_16005 PF01381 Helix-turn-helix KM393_16010 PF02660 Glycerol-3-phosphate acyltransferase KM393_16015 PF04073 Aminoacyl-tRNA editing domain KM393_16020 PF03129 Anticodon binding domain KM393_16020 PF13393 Histidyl-tRNA synthetase KM393_16035 PF01638 HxlR-like helix-turn-helix KM393_16040 PF00881 Nitroreductase family KM393_16050 PF00391 PEP-utilising enzyme, mobile domain KM393_16050 PF02887 Pyruvate kinase, alpha/beta domain KM393_16050 PF00224 Pyruvate kinase, barrel domain KM393_16070 PF00005 ABC transporter KM393_16095 PF13419 Haloacid dehalogenase-like hydrolase KM393_16105 PF13350 Tyrosine phosphatase family KM393_16130 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM393_16135 PF00480 ROK family KM393_16140 PF07690 Major Facilitator Superfamily KM393_16145 PF14602 Hexapeptide repeat of succinyl-transferase KM393_16145 PF12464 Maltose acetyltransferase KM393_16155 PF02687 FtsX-like permease family KM393_16155 PF12704 MacB-like periplasmic core domain KM393_16155 PF00005 ABC transporter KM393_16165 PF00579 tRNA synthetases class I (W and Y) KM393_16170 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KM393_16170 PF13288 DXP reductoisomerase C-terminal domain KM393_16170 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KM393_16175 PF01594 AI-2E family transporter KM393_16195 PF08241 Methyltransferase domain KM393_16205 PF07690 Major Facilitator Superfamily KM393_16225 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM393_16235 PF01595 Cyclin M transmembrane N-terminal domain KM393_16235 PF03471 Transporter associated domain KM393_16235 PF00571 CBS domain KM393_16240 PF13411 MerR HTH family regulatory protein KM393_16245 PF00892 EamA-like transporter family KM393_16250 PF00805 Pentapeptide repeats (8 copies) KM393_16255 PF06906 Protein of unknown function (DUF1272) KM393_16260 PF10282 Lactonase, 7-bladed beta-propeller KM393_16265 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM393_16265 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM393_16270 PF02447 GntP family permease KM393_16275 PF00923 Transaldolase/Fructose-6-phosphate aldolase KM393_16280 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain KM393_16280 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM393_16285 PF00456 Transketolase, thiamine diphosphate binding domain KM393_16285 PF02779 Transketolase, pyrimidine binding domain KM393_16285 PF02780 Transketolase, C-terminal domain KM393_16290 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KM393_16290 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KM393_16295 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KM393_16295 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KM393_16300 PF08240 Alcohol dehydrogenase GroES-like domain KM393_16300 PF00107 Zinc-binding dehydrogenase KM393_16305 PF00296 Luciferase-like monooxygenase KM393_16315 PF00550 Phosphopantetheine attachment site KM393_16315 PF00698 Acyl transferase domain KM393_16315 PF08240 Alcohol dehydrogenase GroES-like domain KM393_16315 PF16197 Ketoacyl-synthetase C-terminal extension KM393_16315 PF00109 Beta-ketoacyl synthase, N-terminal domain KM393_16315 PF02801 Beta-ketoacyl synthase, C-terminal domain KM393_16315 PF08659 KR domain KM393_16315 PF14765 Polyketide synthase dehydratase KM393_16320 PF00106 short chain dehydrogenase KM393_16325 PF03413 Peptidase propeptide and YPEB domain KM393_16325 PF07504 Fungalysin/Thermolysin Propeptide Motif KM393_16325 PF02868 Thermolysin metallopeptidase, alpha-helical domain KM393_16325 PF01447 Thermolysin metallopeptidase, catalytic domain KM393_16345 PF00248 Aldo/keto reductase family KM393_16350 PF07690 Major Facilitator Superfamily KM393_16360 PF03928 Haem-degrading KM393_16365 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM393_16395 PF03960 ArsC family KM393_16400 PF01638 HxlR-like helix-turn-helix KM393_16405 PF00392 Bacterial regulatory proteins, gntR family KM393_16405 PF07702 UTRA domain KM393_16420 PF01638 HxlR-like helix-turn-helix KM393_16425 PF01638 HxlR-like helix-turn-helix KM393_16430 PF00248 Aldo/keto reductase family KM393_16460 PF02567 Phenazine biosynthesis-like protein KM393_16480 PF00501 AMP-binding enzyme KM393_16480 PF13193 AMP-binding enzyme C-terminal domain KM393_16490 PF01638 HxlR-like helix-turn-helix KM393_16510 PF01022 Bacterial regulatory protein, arsR family KM393_16520 PF12791 Anti-sigma factor N-terminus KM393_16525 PF04542 Sigma-70 region 2 KM393_16540 PF00440 Bacterial regulatory proteins, tetR family KM393_16560 PF05656 Protein of unknown function (DUF805) KM393_16565 PF01061 ABC-2 type transporter KM393_16570 PF00005 ABC transporter KM393_16570 PF13732 Domain of unknown function (DUF4162) KM393_16585 PF03063 Prismane/CO dehydrogenase family KM393_16595 PF00753 Metallo-beta-lactamase superfamily KM393_16600 PF01471 Putative peptidoglycan binding domain KM393_16600 PF01183 Glycosyl hydrolases family 25 KM393_16625 PF00144 Beta-lactamase KM393_16665 PF00753 Metallo-beta-lactamase superfamily KM393_16670 PF08240 Alcohol dehydrogenase GroES-like domain KM393_16670 PF00107 Zinc-binding dehydrogenase KM393_16675 PF00324 Amino acid permease KM393_16680 PF07690 Major Facilitator Superfamily KM393_16705 PF02585 GlcNAc-PI de-N-acetylase KM393_16710 PF08830 Protein of unknown function (DUF1806) KM393_16715 PF03600 Citrate transporter KM393_16735 PF01497 Periplasmic binding protein KM393_16740 PF01032 FecCD transport family KM393_16745 PF01032 FecCD transport family KM393_16750 PF05675 Protein of unknown function (DUF817) KM393_16755 PF02567 Phenazine biosynthesis-like protein KM393_16760 PF13170 Protein of unknown function (DUF4003) KM393_16775 PF10901 Protein of unknown function (DUF2690) KM393_16785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM393_16785 PF03466 LysR substrate binding domain KM393_16790 PF08240 Alcohol dehydrogenase GroES-like domain KM393_16790 PF00107 Zinc-binding dehydrogenase KM393_16805 PF00488 MutS domain V KM393_16805 PF01713 Smr domain KM393_16815 PF00128 Alpha amylase, catalytic domain KM393_16815 PF09154 Domain of unknown function (DUF1939) KM393_16830 PF00144 Beta-lactamase KM393_16840 PF07690 Major Facilitator Superfamily KM393_16845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM393_16845 PF03466 LysR substrate binding domain KM393_16860 PF03009 Glycerophosphoryl diester phosphodiesterase family KM393_16880 PF01494 FAD binding domain KM393_16885 PF01022 Bacterial regulatory protein, arsR family KM393_16890 PF00107 Zinc-binding dehydrogenase KM393_16890 PF08240 Alcohol dehydrogenase GroES-like domain KM393_16895 PF02696 Uncharacterized ACR, YdiU/UPF0061 family KM393_16910 PF04299 Putative FMN-binding domain KM393_16915 PF04229 GrpB protein KM393_16925 PF01758 Sodium Bile acid symporter family KM393_16930 PF01565 FAD binding domain KM393_16930 PF02913 FAD linked oxidases, C-terminal domain KM393_16950 PF00132 Bacterial transferase hexapeptide (six repeats) KM393_16955 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KM393_16960 PF00535 Glycosyl transferase family 2 KM393_16965 PF00378 Enoyl-CoA hydratase/isomerase KM393_16970 PF18496 Collagenase G catalytic helper subdomain KM393_16970 PF01752 Collagenase KM393_16970 PF08453 Peptidase family M9 N-terminal KM393_16975 PF02308 MgtC family KM393_16990 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM393_16995 PF04294 VanW like protein KM393_17005 PF13037 Domain of unknown function (DUF3898) KM393_17005 PF13039 Protein of unknown function (DUF3900) KM393_17025 PF00313 'Cold-shock' DNA-binding domain KM393_17035 PF00258 Flavodoxin KM393_17045 PF00293 NUDIX domain KM393_17055 PF00132 Bacterial transferase hexapeptide (six repeats) KM393_17065 PF00106 short chain dehydrogenase KM393_17075 PF14698 Argininosuccinate lyase C-terminal KM393_17075 PF00206 Lyase KM393_17085 PF01156 Inosine-uridine preferring nucleoside hydrolase KM393_17090 PF00474 Sodium:solute symporter family KM393_17100 PF00171 Aldehyde dehydrogenase family KM393_17110 PF14151 YfhD-like protein KM393_17115 PF13249 Squalene-hopene cyclase N-terminal domain KM393_17115 PF13243 Squalene-hopene cyclase C-terminal domain KM393_17120 PF02681 Divergent PAP2 family KM393_17125 PF00892 EamA-like transporter family KM393_17130 PF06961 Protein of unknown function (DUF1294) KM393_17145 PF10609 NUBPL iron-transfer P-loop NTPase KM393_17155 PF02391 MoaE protein KM393_17160 PF03453 MoeA N-terminal region (domain I and II) KM393_17160 PF03454 MoeA C-terminal region (domain IV) KM393_17160 PF00994 Probable molybdopterin binding domain KM393_17165 PF00899 ThiF family KM393_17170 PF01226 Formate/nitrite transporter KM393_17175 PF06463 Molybdenum Cofactor Synthesis C KM393_17175 PF04055 Radical SAM superfamily KM393_17180 PF02634 FdhD/NarQ family KM393_17185 PF10057 Uncharacterized conserved protein (DUF2294) KM393_17190 PF07849 Protein of unknown function (DUF1641) KM393_17195 PF01568 Molydopterin dinucleotide binding domain KM393_17195 PF00384 Molybdopterin oxidoreductase KM393_17195 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KM393_17195 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KM393_17195 PF00037 4Fe-4S binding domain KM393_17200 PF03323 Bacillus/Clostridium GerA spore germination protein KM393_17240 PF08241 Methyltransferase domain KM393_17245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM393_17250 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM393_17255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM393_17260 PF00375 Sodium:dicarboxylate symporter family KM393_17265 PF03816 Cell envelope-related transcriptional attenuator domain KM393_17275 PF08281 Sigma-70, region 4 KM393_17275 PF04542 Sigma-70 region 2 KM393_17295 PF13732 Domain of unknown function (DUF4162) KM393_17295 PF00005 ABC transporter KM393_17305 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM393_17305 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KM393_17310 PF03989 DNA gyrase C-terminal domain, beta-propeller KM393_17310 PF00521 DNA gyrase/topoisomerase IV, subunit A KM393_17315 PF01751 Toprim domain KM393_17315 PF00204 DNA gyrase B KM393_17315 PF00986 DNA gyrase B subunit, carboxyl terminus KM393_17315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_17320 PF13380 CoA binding domain KM393_17325 PF13180 PDZ domain KM393_17330 PF00486 Transcriptional regulatory protein, C terminal KM393_17330 PF00072 Response regulator receiver domain KM393_17340 PF03477 ATP cone domain KM393_17340 PF13597 Anaerobic ribonucleoside-triphosphate reductase KM393_17345 PF02660 Glycerol-3-phosphate acyltransferase KM393_17350 PF01521 Iron-sulphur cluster biosynthesis KM393_17355 PF03061 Thioesterase superfamily KM393_17360 PF01476 LysM domain KM393_17360 PF00704 Glycosyl hydrolases family 18 KM393_17370 PF08177 Small acid-soluble spore protein N family KM393_17375 PF13040 Fur-regulated basic protein B KM393_17380 PF11490 DNA polymerase III polC-type N-terminus II KM393_17380 PF07733 Bacterial DNA polymerase III alpha NTPase domain KM393_17380 PF14579 Helix-hairpin-helix motif KM393_17380 PF02811 PHP domain KM393_17380 PF00929 Exonuclease KM393_17380 PF01336 OB-fold nucleic acid binding domain KM393_17380 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KM393_17385 PF00578 AhpC/TSA family KM393_17395 PF03412 Peptidase C39 family KM393_17395 PF00664 ABC transporter transmembrane region KM393_17395 PF00005 ABC transporter KM393_17400 PF00330 Aconitase family (aconitate hydratase) KM393_17400 PF00694 Aconitase C-terminal domain KM393_17410 PF01522 Polysaccharide deacetylase KM393_17440 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM393_17440 PF01411 tRNA synthetases class II (A) KM393_17440 PF02272 DHHA1 domain KM393_17445 PF00293 NUDIX domain KM393_17445 PF13344 Haloacid dehalogenase-like hydrolase KM393_17455 PF02803 Thiolase, C-terminal domain KM393_17455 PF00108 Thiolase, N-terminal domain KM393_17460 PF00501 AMP-binding enzyme KM393_17460 PF13193 AMP-binding enzyme C-terminal domain KM393_17465 PF02632 BioY family KM393_17470 PF00501 AMP-binding enzyme KM393_17470 PF13193 AMP-binding enzyme C-terminal domain KM393_17490 PF05532 CsbD-like KM393_17520 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM393_17520 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM393_17535 PF01738 Dienelactone hydrolase family KM393_17540 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM393_17545 PF00474 Sodium:solute symporter family KM393_17550 PF01645 Conserved region in glutamate synthase KM393_17555 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KM393_17560 PF02559 CarD-like/TRCF domain KM393_17565 PF00491 Arginase family KM393_17570 PF01979 Amidohydrolase family KM393_17575 PF17392 Urocanase C-terminal domain KM393_17575 PF17391 Urocanase N-terminal domain KM393_17575 PF01175 Urocanase Rossmann-like domain KM393_17580 PF00221 Aromatic amino acid lyase KM393_17585 PF09021 HutP KM393_17590 PF01209 ubiE/COQ5 methyltransferase family KM393_17610 PF11084 Protein of unknown function (DUF2621) KM393_17645 PF07301 Protein of unknown function (DUF1453) KM393_17650 PF02683 Cytochrome C biogenesis protein transmembrane region KM393_17660 PF03466 LysR substrate binding domain KM393_17660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM393_17665 PF03788 LrgA family KM393_17670 PF04172 LrgB-like family KM393_17675 PF13344 Haloacid dehalogenase-like hydrolase KM393_17675 PF00293 NUDIX domain KM393_17695 PF01471 Putative peptidoglycan binding domain KM393_17695 PF01510 N-acetylmuramoyl-L-alanine amidase KM393_17710 PF00664 ABC transporter transmembrane region KM393_17710 PF00005 ABC transporter KM393_17715 PF00005 ABC transporter KM393_17715 PF00664 ABC transporter transmembrane region KM393_17720 PF03672 Uncharacterised protein family (UPF0154) KM393_17725 PF10747 Sporulation inhibitor of replication protein SirA KM393_17730 PF02780 Transketolase, C-terminal domain KM393_17730 PF00456 Transketolase, thiamine diphosphate binding domain KM393_17730 PF02779 Transketolase, pyrimidine binding domain KM393_17735 PF07282 Putative transposase DNA-binding domain KM393_17735 PF01385 Probable transposase KM393_17735 PF12323 Helix-turn-helix domain KM393_17740 PF00528 Binding-protein-dependent transport system inner membrane component KM393_17745 PF00528 Binding-protein-dependent transport system inner membrane component KM393_17750 PF00005 ABC transporter KM393_17765 PF05979 Bacterial protein of unknown function (DUF896) KM393_17770 PF00239 Resolvase, N terminal domain KM393_17775 PF01726 LexA DNA binding domain KM393_17775 PF00717 Peptidase S24-like KM393_17790 PF03551 Transcriptional regulator PadR-like family KM393_17825 PF01510 N-acetylmuramoyl-L-alanine amidase KM393_17825 PF01476 LysM domain KM393_17825 PF01471 Putative peptidoglycan binding domain KM393_17830 PF05105 Bacteriophage holin family KM393_17985 PF08281 Sigma-70, region 4 KM393_18030 PF02511 Thymidylate synthase complementing protein KM393_18035 PF00145 C-5 cytosine-specific DNA methylase KM393_18110 PF01381 Helix-turn-helix KM393_18130 PF00589 Phage integrase family KM393_18130 PF02899 Phage integrase, N-terminal SAM-like domain KM393_18135 PF03951 Glutamine synthetase, beta-Grasp domain KM393_18135 PF00120 Glutamine synthetase, catalytic domain KM393_18140 PF13411 MerR HTH family regulatory protein KM393_18145 PF06838 Methionine gamma-lyase KM393_18155 PF03458 UPF0126 domain KM393_18165 PF17866 AAA lid domain KM393_18165 PF00004 ATPase family associated with various cellular activities (AAA) KM393_18180 PF17209 Hfq protein KM393_18195 PF06725 3D domain KM393_18195 PF01476 LysM domain KM393_18200 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KM393_18200 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KM393_18205 PF00294 pfkB family carbohydrate kinase KM393_18210 PF08220 DeoR-like helix-turn-helix domain KM393_18210 PF00455 DeoR C terminal sensor domain KM393_18220 PF04238 Protein of unknown function (DUF420) KM393_18230 PF00324 Amino acid permease KM393_18235 PF00704 Glycosyl hydrolases family 18 KM393_18235 PF00041 Fibronectin type III domain KM393_18245 PF10518 TAT (twin-arginine translocation) pathway signal sequence KM393_18245 PF00149 Calcineurin-like phosphoesterase KM393_18250 PF01226 Formate/nitrite transporter KM393_18255 PF00216 Bacterial DNA-binding protein KM393_18260 PF00403 Heavy-metal-associated domain KM393_18265 PF00403 Heavy-metal-associated domain KM393_18270 PF02583 Metal-sensitive transcriptional repressor KM393_18280 PF00756 Putative esterase KM393_18285 PF00005 ABC transporter KM393_18290 PF01032 FecCD transport family KM393_18295 PF01032 FecCD transport family KM393_18300 PF01497 Periplasmic binding protein KM393_18305 PF03372 Endonuclease/Exonuclease/phosphatase family KM393_18310 PF12833 Helix-turn-helix domain KM393_18310 PF02805 Metal binding domain of Ada KM393_18315 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KM393_18315 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KM393_18320 PF00730 HhH-GPD superfamily base excision DNA repair protein KM393_18320 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain KM393_18325 PF07687 Peptidase dimerisation domain KM393_18325 PF01546 Peptidase family M20/M25/M40 KM393_18345 PF00561 alpha/beta hydrolase fold KM393_18350 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM393_18355 PF00990 Diguanylate cyclase, GGDEF domain KM393_18355 PF03707 Bacterial signalling protein N terminal repeat KM393_18355 PF00563 EAL domain KM393_18365 PF10787 Uncharacterised protein from bacillus cereus group KM393_18370 PF04172 LrgB-like family KM393_18375 PF03788 LrgA family KM393_18380 PF00392 Bacterial regulatory proteins, gntR family KM393_18380 PF00155 Aminotransferase class I and II KM393_18385 PF00561 alpha/beta hydrolase fold KM393_18385 PF00364 Biotin-requiring enzyme KM393_18390 PF02585 GlcNAc-PI de-N-acetylase KM393_18405 PF00388 Phosphatidylinositol-specific phospholipase C, X domain KM393_18410 PF00082 Subtilase family KM393_18415 PF07486 Cell Wall Hydrolase KM393_18420 PF03275 UDP-galactopyranose mutase KM393_18425 PF00884 Sulfatase KM393_18430 PF00350 Dynamin family KM393_18440 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family KM393_18445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_18445 PF00512 His Kinase A (phospho-acceptor) domain KM393_18450 PF00072 Response regulator receiver domain KM393_18450 PF00486 Transcriptional regulatory protein, C terminal KM393_18465 PF00005 ABC transporter KM393_18470 PF08676 MutL C terminal dimerisation domain KM393_18470 PF01119 DNA mismatch repair protein, C-terminal domain KM393_18475 PF05192 MutS domain III KM393_18475 PF05190 MutS family domain IV KM393_18475 PF00488 MutS domain V KM393_18475 PF05188 MutS domain II KM393_18475 PF01624 MutS domain I KM393_18480 PF10628 Outer spore coat protein E (CotE) KM393_18485 PF06133 Control of competence regulator ComK, YlbF/YmcA KM393_18490 PF04055 Radical SAM superfamily KM393_18490 PF00919 Uncharacterized protein family UPF0004 KM393_18490 PF01938 TRAM domain KM393_18495 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM393_18500 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg KM393_18500 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase KM393_18500 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II KM393_18505 PF01244 Membrane dipeptidase (Peptidase family M19) KM393_18510 PF04232 Stage V sporulation protein S (SpoVS) KM393_18515 PF13277 YmdB-like protein KM393_18520 PF01966 HD domain KM393_18520 PF00013 KH domain KM393_18520 PF12072 Domain of unknown function (DUF3552) KM393_18525 PF00154 recA bacterial DNA recombination protein KM393_18535 PF02464 Competence-damaged protein KM393_18535 PF18146 Damage-inducible protein CinA KH domain KM393_18535 PF00994 Probable molybdopterin binding domain KM393_18540 PF01066 CDP-alcohol phosphatidyltransferase KM393_18545 PF13464 Domain of unknown function (DUF4115) KM393_18550 PF11868 Protein of unknown function (DUF3388) KM393_18555 PF11588 Protein of unknown function (DUF3243) KM393_18565 PF00675 Insulinase (Peptidase family M16) KM393_18565 PF05193 Peptidase M16 inactive domain KM393_18570 PF05193 Peptidase M16 inactive domain KM393_18575 PF02653 Branched-chain amino acid transport system / permease component KM393_18585 PF00005 ABC transporter KM393_18590 PF02608 ABC transporter substrate-binding protein PnrA-like KM393_18595 PF07702 UTRA domain KM393_18595 PF00392 Bacterial regulatory proteins, gntR family KM393_18600 PF01580 FtsK/SpoIIIE family KM393_18600 PF17854 FtsK alpha domain KM393_18600 PF09397 Ftsk gamma domain KM393_18605 PF14035 YlzJ-like protein KM393_18610 PF00574 Clp protease KM393_18615 PF17770 Ribonuclease J C-terminal domain KM393_18615 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KM393_18615 PF00753 Metallo-beta-lactamase superfamily KM393_18620 PF00701 Dihydrodipicolinate synthetase family KM393_18625 PF13840 ACT domain KM393_18625 PF00696 Amino acid kinase family KM393_18630 PF01118 Semialdehyde dehydrogenase, NAD binding domain KM393_18630 PF02774 Semialdehyde dehydrogenase, dimerisation domain KM393_18635 PF02441 Flavoprotein KM393_18640 PF16924 Dipicolinate synthase subunit A N-terminal domain KM393_18640 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KM393_18645 PF05239 PRC-barrel domain KM393_18650 PF05193 Peptidase M16 inactive domain KM393_18650 PF00675 Insulinase (Peptidase family M16) KM393_18655 PF01522 Polysaccharide deacetylase KM393_18660 PF00575 S1 RNA binding domain KM393_18660 PF03725 3' exoribonuclease family, domain 2 KM393_18660 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KM393_18660 PF00013 KH domain KM393_18660 PF01138 3' exoribonuclease family, domain 1 KM393_18665 PF00312 Ribosomal protein S15 KM393_18670 PF06574 FAD synthetase KM393_18670 PF01687 Riboflavin kinase KM393_18675 PF16198 tRNA pseudouridylate synthase B C-terminal domain KM393_18675 PF01509 TruB family pseudouridylate synthase (N terminal domain) KM393_18680 PF02033 Ribosome-binding factor A KM393_18685 PF04456 Protein of unknown function (DUF503) KM393_18690 PF11987 Translation-initiation factor 2 KM393_18690 PF00009 Elongation factor Tu GTP binding domain KM393_18690 PF04760 Translation initiation factor IF-2, N-terminal region KM393_18695 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family KM393_18700 PF04296 Protein of unknown function (DUF448) KM393_18705 PF00575 S1 RNA binding domain KM393_18705 PF08529 NusA N-terminal domain KM393_18705 PF13184 NusA-like KH domain KM393_18710 PF17384 RimP C-terminal SH3 domain KM393_18710 PF02576 RimP N-terminal domain KM393_18715 PF14579 Helix-hairpin-helix motif KM393_18715 PF14480 DNA polymerase III polC-type N-terminus I KM393_18715 PF11490 DNA polymerase III polC-type N-terminus II KM393_18715 PF07733 Bacterial DNA polymerase III alpha NTPase domain KM393_18715 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KM393_18715 PF02811 PHP domain KM393_18715 PF00929 Exonuclease KM393_18720 PF03129 Anticodon binding domain KM393_18720 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM393_18720 PF04073 Aminoacyl-tRNA editing domain KM393_18725 PF02163 Peptidase family M50 KM393_18725 PF17820 PDZ domain KM393_18730 PF13288 DXP reductoisomerase C-terminal domain KM393_18730 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KM393_18730 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KM393_18740 PF01255 Putative undecaprenyl diphosphate synthase KM393_18745 PF01765 Ribosome recycling factor KM393_18750 PF00696 Amino acid kinase family KM393_18755 PF00889 Elongation factor TS KM393_18760 PF00318 Ribosomal protein S2 KM393_18765 PF06018 CodY GAF-like domain KM393_18765 PF08222 CodY helix-turn-helix domain KM393_18770 PF07724 AAA domain (Cdc48 subfamily) KM393_18770 PF00004 ATPase family associated with various cellular activities (AAA) KM393_18770 PF10431 C-terminal, D2-small domain, of ClpB protein KM393_18775 PF00227 Proteasome subunit KM393_18780 PF02899 Phage integrase, N-terminal SAM-like domain KM393_18780 PF00589 Phage integrase family KM393_18785 PF01134 Glucose inhibited division protein A KM393_18790 PF01396 Topoisomerase DNA binding C4 zinc finger KM393_18790 PF01751 Toprim domain KM393_18790 PF01131 DNA topoisomerase KM393_18800 PF02629 CoA binding domain KM393_18800 PF00549 CoA-ligase KM393_18805 PF08442 ATP-grasp domain KM393_18805 PF00549 CoA-ligase KM393_18810 PF01351 Ribonuclease HII KM393_18815 PF01926 50S ribosome-binding GTPase KM393_18820 PF10502 Signal peptidase, peptidase S26 KM393_18825 PF01245 Ribosomal protein L19 KM393_18830 PF01746 tRNA (Guanine-1)-methyltransferase KM393_18835 PF05239 PRC-barrel domain KM393_18835 PF01782 RimM N-terminal domain KM393_18845 PF00886 Ribosomal protein S16 KM393_18850 PF02881 SRP54-type protein, helical bundle domain KM393_18850 PF02978 Signal peptide binding domain KM393_18850 PF00448 SRP54-type protein, GTPase domain KM393_18855 PF04297 Putative helix-turn-helix protein, YlxM / p13 like KM393_18860 PF00448 SRP54-type protein, GTPase domain KM393_18860 PF02881 SRP54-type protein, helical bundle domain KM393_18865 PF02463 RecF/RecN/SMC N terminal domain KM393_18865 PF06470 SMC proteins Flexible Hinge Domain KM393_18870 PF14622 Ribonuclease-III-like KM393_18870 PF00035 Double-stranded RNA binding motif KM393_18875 PF00550 Phosphopantetheine attachment site KM393_18885 PF00698 Acyl transferase domain KM393_18890 PF02504 Fatty acid synthesis protein KM393_18895 PF03061 Thioesterase superfamily KM393_18900 PF00271 Helicase conserved C-terminal domain KM393_18900 PF17191 RecG wedge domain KM393_18900 PF00270 DEAD/DEAH box helicase KM393_18905 PF02734 DAK2 domain KM393_18905 PF13684 Dihydroxyacetone kinase family KM393_18910 PF03780 Asp23 family, cell envelope-related function KM393_18915 PF00830 Ribosomal L28 family KM393_18920 PF08183 Stage V sporulation protein family KM393_18925 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain KM393_18925 PF04263 Thiamin pyrophosphokinase, catalytic domain KM393_18930 PF00834 Ribulose-phosphate 3 epimerase family KM393_18935 PF03193 RsgA GTPase KM393_18935 PF16745 RsgA N-terminal domain KM393_18940 PF03793 PASTA domain KM393_18940 PF00069 Protein kinase domain KM393_18950 PF04055 Radical SAM superfamily KM393_18955 PF01029 NusB family KM393_18955 PF01189 16S rRNA methyltransferase RsmB/F KM393_18960 PF02911 Formyl transferase, C-terminal domain KM393_18960 PF00551 Formyl transferase KM393_18965 PF01327 Polypeptide deformylase KM393_18970 PF00271 Helicase conserved C-terminal domain KM393_18970 PF17764 3′ DNA-binding domain (3′BD) KM393_18970 PF18074 Primosomal protein N C-terminal domain KM393_18970 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KM393_18970 PF04851 Type III restriction enzyme, res subunit KM393_18975 PF04127 DNA / pantothenate metabolism flavoprotein KM393_18975 PF02441 Flavoprotein KM393_18980 PF01192 RNA polymerase Rpb6 KM393_18985 PF00625 Guanylate kinase KM393_18990 PF04025 Domain of unknown function (DUF370) KM393_18995 PF08340 Domain of unknown function (DUF1732) KM393_18995 PF03755 YicC-like family, N-terminal region KM393_19000 PF00689 Cation transporting ATPase, C-terminus KM393_19000 PF00690 Cation transporter/ATPase, N-terminus KM393_19005 PF05670 NFACT protein RNA binding domain KM393_19010 PF01321 Creatinase/Prolidase N-terminal domain KM393_19010 PF00557 Metallopeptidase family M24 KM393_19040 PF00156 Phosphoribosyl transferase domain KM393_19045 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KM393_19050 PF01180 Dihydroorotate dehydrogenase KM393_19055 PF00175 Oxidoreductase NAD-binding domain KM393_19055 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B KM393_19060 PF02142 MGS-like domain KM393_19060 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM393_19060 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KM393_19065 PF00117 Glutamine amidotransferase class-I KM393_19065 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KM393_19070 PF01979 Amidohydrolase family KM393_19075 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KM393_19075 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KM393_19080 PF00860 Permease family KM393_19085 PF00156 Phosphoribosyl transferase domain KM393_19090 PF00849 RNA pseudouridylate synthase KM393_19090 PF01479 S4 domain KM393_19095 PF01252 Signal peptidase (SPase) II KM393_19105 PF08264 Anticodon-binding domain of tRNA KM393_19105 PF06827 Zinc finger found in FPG and IleRS KM393_19105 PF00133 tRNA synthetases class I (I, L, M and V) KM393_19110 PF05103 DivIVA protein KM393_19115 PF01479 S4 domain KM393_19115 PF17774 Putative RNA-binding domain in YlmH KM393_19120 PF02325 YGGT family KM393_19125 PF04472 Cell division protein SepF KM393_19130 PF01168 Alanine racemase, N-terminal domain KM393_19135 PF02578 Multi-copper polyphenol oxidoreductase laccase KM393_19140 PF05239 PRC-barrel domain KM393_19145 PF04542 Sigma-70 region 2 KM393_19145 PF04539 Sigma-70 region 3 KM393_19145 PF04545 Sigma-70, region 4 KM393_19150 PF04542 Sigma-70 region 2 KM393_19150 PF04545 Sigma-70, region 4 KM393_19155 PF03419 Sporulation factor SpoIIGA KM393_19160 PF00091 Tubulin/FtsZ family, GTPase domain KM393_19160 PF12327 FtsZ family, C-terminal domain KM393_19165 PF02491 SHS2 domain inserted in FTSA KM393_19170 PF03799 Cell division protein FtsQ KM393_19170 PF08478 POTRA domain, FtsQ-type KM393_19175 PF01565 FAD binding domain KM393_19175 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KM393_19180 PF04101 Glycosyltransferase family 28 C-terminal domain KM393_19180 PF03033 Glycosyltransferase family 28 N-terminal domain KM393_19185 PF01098 Cell cycle protein KM393_19190 PF02875 Mur ligase family, glutamate ligase domain KM393_19190 PF08245 Mur ligase middle domain KM393_19195 PF00953 Glycosyl transferase family 4 KM393_19195 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 KM393_19200 PF02875 Mur ligase family, glutamate ligase domain KM393_19200 PF01225 Mur ligase family, catalytic domain KM393_19200 PF08245 Mur ligase middle domain KM393_19205 PF00905 Penicillin binding protein transpeptidase domain KM393_19205 PF03793 PASTA domain KM393_19205 PF03717 Penicillin-binding Protein dimerisation domain KM393_19210 PF00905 Penicillin binding protein transpeptidase domain KM393_19210 PF03793 PASTA domain KM393_19210 PF03717 Penicillin-binding Protein dimerisation domain KM393_19215 PF04977 Septum formation initiator KM393_19220 PF01795 MraW methylase family KM393_19225 PF10079 Bacillithiol biosynthesis BshC KM393_19230 PF02558 Ketopantoate reductase PanE/ApbA KM393_19230 PF08546 Ketopantoate reductase PanE/ApbA C terminal KM393_19235 PF00583 Acetyltransferase (GNAT) family KM393_19245 PF01783 Ribosomal L32p protein family KM393_19250 PF02620 Large ribosomal RNA subunit accumulation protein YceD KM393_19295 PF12123 N-acetylmuramoyl-l-alanine amidase KM393_19295 PF01510 N-acetylmuramoyl-L-alanine amidase KM393_19300 PF05105 Bacteriophage holin family KM393_19375 PF00574 Clp protease KM393_19385 PF03354 Phage Terminase KM393_19405 PF10137 Predicted nucleotide-binding protein containing TIR-like domain KM393_19460 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM393_19475 PF00692 dUTPase KM393_19490 PF04539 Sigma-70 region 3 KM393_19490 PF04542 Sigma-70 region 2 KM393_19490 PF04545 Sigma-70, region 4 KM393_19515 PF07319 Primosomal protein DnaI N-terminus KM393_19515 PF01695 IstB-like ATP binding protein KM393_19545 PF01381 Helix-turn-helix KM393_19560 PF01381 Helix-turn-helix KM393_19575 PF00589 Phage integrase family KM393_19575 PF14659 Phage integrase, N-terminal SAM-like domain KM393_19580 PF05636 HIGH Nucleotidyl Transferase KM393_19585 PF05362 Lon protease (S16) C-terminal proteolytic domain KM393_19585 PF13180 PDZ domain KM393_19590 PF01734 Patatin-like phospholipase KM393_19595 PF07670 Nucleoside recognition KM393_19600 PF01467 Cytidylyltransferase-like KM393_19615 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) KM393_19620 PF06133 Control of competence regulator ComK, YlbF/YmcA KM393_19625 PF00300 Histidine phosphatase superfamily (branch 1) KM393_19630 PF14003 YlbE-like protein KM393_19635 PF14071 Putative coat protein KM393_19640 PF00188 Cysteine-rich secretory protein family KM393_19640 PF14504 CAP-associated N-terminal KM393_19645 PF08868 YugN-like family KM393_19650 PF00795 Carbon-nitrogen hydrolase KM393_19655 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) KM393_19660 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KM393_19665 PF00510 Cytochrome c oxidase subunit III KM393_19670 PF00115 Cytochrome C and Quinol oxidase polypeptide I KM393_19675 PF00034 Cytochrome c KM393_19675 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KM393_19675 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KM393_19680 PF01040 UbiA prenyltransferase family KM393_19685 PF02628 Cytochrome oxidase assembly protein KM393_19690 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM393_19690 PF02785 Biotin carboxylase C-terminal domain KM393_19690 PF00289 Biotin carboxylase, N-terminal domain KM393_19690 PF00364 Biotin-requiring enzyme KM393_19690 PF00682 HMGL-like KM393_19690 PF02436 Conserved carboxylase domain KM393_19695 PF01098 Cell cycle protein KM393_19700 PF07408 Protein of unknown function (DUF1507) KM393_19710 PF13638 PIN domain KM393_19710 PF02562 PhoH-like protein KM393_19720 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) KM393_19730 PF14036 YlaH-like protein KM393_19735 PF00009 Elongation factor Tu GTP binding domain KM393_19735 PF03144 Elongation factor Tu domain 2 KM393_19735 PF00679 Elongation factor G C-terminus KM393_19735 PF14492 Elongation Factor G, domain II KM393_19745 PF00459 Inositol monophosphatase family KM393_19755 PF06335 Protein of unknown function (DUF1054) KM393_19760 PF05256 Uncharacterised protein family (UPF0223) KM393_19765 PF01276 Orn/Lys/Arg decarboxylase, major domain KM393_19765 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KM393_19805 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM393_19805 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM393_19810 PF00364 Biotin-requiring enzyme KM393_19810 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM393_19810 PF02817 e3 binding domain KM393_19815 PF02779 Transketolase, pyrimidine binding domain KM393_19815 PF02780 Transketolase, C-terminal domain KM393_19820 PF00676 Dehydrogenase E1 component KM393_19830 PF01327 Polypeptide deformylase KM393_19840 PF07288 Protein of unknown function (DUF1447) KM393_19845 PF17770 Ribonuclease J C-terminal domain KM393_19845 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KM393_19845 PF00753 Metallo-beta-lactamase superfamily KM393_19850 PF02080 TrkA-C domain KM393_19850 PF02254 TrkA-N domain KM393_19860 PF01546 Peptidase family M20/M25/M40 KM393_19860 PF07687 Peptidase dimerisation domain KM393_19865 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal KM393_19865 PF00132 Bacterial transferase hexapeptide (six repeats) KM393_19865 PF14602 Hexapeptide repeat of succinyl-transferase KM393_19870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM393_19870 PF03466 LysR substrate binding domain KM393_19885 PF04308 Ribonuclease H-like KM393_19895 PF08796 Protein of unknown function (DUF1797) KM393_19910 PF00563 EAL domain KM393_19910 PF10388 EAL-domain associated signalling protein domain KM393_19920 PF00149 Calcineurin-like phosphoesterase KM393_19920 PF10518 TAT (twin-arginine translocation) pathway signal sequence KM393_19930 PF17941 Polyphosphate kinase C-terminal domain 1 KM393_19930 PF13090 Polyphosphate kinase C-terminal domain 2 KM393_19930 PF02503 Polyphosphate kinase middle domain KM393_19930 PF13089 Polyphosphate kinase N-terminal domain KM393_19935 PF02541 Ppx/GppA phosphatase family KM393_19940 PF14177 YkyB-like protein KM393_19965 PF07690 Major Facilitator Superfamily KM393_19975 PF08267 Cobalamin-independent synthase, N-terminal domain KM393_19975 PF01717 Cobalamin-independent synthase, Catalytic domain KM393_19985 PF14040 Deoxyribonuclease NucA/NucB KM393_19995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_19995 PF00512 His Kinase A (phospho-acceptor) domain KM393_20005 PF00155 Aminotransferase class I and II KM393_20010 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KM393_20010 PF00356 Bacterial regulatory proteins, lacI family KM393_20015 PF00528 Binding-protein-dependent transport system inner membrane component KM393_20020 PF00528 Binding-protein-dependent transport system inner membrane component KM393_20025 PF13416 Bacterial extracellular solute-binding protein KM393_20030 PF00128 Alpha amylase, catalytic domain KM393_20030 PF02903 Alpha amylase, N-terminal ig-like domain KM393_20030 PF16657 Maltogenic Amylase, C-terminal domain KM393_20035 PF00128 Alpha amylase, catalytic domain KM393_20035 PF16657 Maltogenic Amylase, C-terminal domain KM393_20040 PF00005 ABC transporter KM393_20040 PF17912 MalK OB fold domain KM393_20040 PF03459 TOBE domain KM393_20080 PF02803 Thiolase, C-terminal domain KM393_20080 PF00108 Thiolase, N-terminal domain KM393_20085 PF00293 NUDIX domain KM393_20115 PF03551 Transcriptional regulator PadR-like family KM393_20130 PF01008 Initiation factor 2 subunit family KM393_20135 PF01636 Phosphotransferase enzyme family KM393_20140 PF00795 Carbon-nitrogen hydrolase KM393_20145 PF00155 Aminotransferase class I and II KM393_20150 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain KM393_20150 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain KM393_20160 PF00596 Class II Aldolase and Adducin N-terminal domain KM393_20165 PF03079 ARD/ARD' family KM393_20185 PF00990 Diguanylate cyclase, GGDEF domain KM393_20185 PF08448 PAS fold KM393_20190 PF00881 Nitroreductase family KM393_20205 PF05524 PEP-utilising enzyme, N-terminal KM393_20205 PF00391 PEP-utilising enzyme, mobile domain KM393_20205 PF02896 PEP-utilising enzyme, TIM barrel domain KM393_20210 PF00381 PTS HPr component phosphorylation site KM393_20215 PF00367 phosphotransferase system, EIIB KM393_20215 PF02378 Phosphotransferase system, EIIC KM393_20215 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KM393_20220 PF03123 CAT RNA binding domain KM393_20220 PF00874 PRD domain KM393_20230 PF00392 Bacterial regulatory proteins, gntR family KM393_20230 PF07702 UTRA domain KM393_20235 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase KM393_20240 PF01979 Amidohydrolase family KM393_20250 PF04079 Segregation and condensation complex subunit ScpB KM393_20255 PF02616 Segregation and condensation protein ScpA KM393_20265 PF03745 Domain of unknown function (DUF309) KM393_20270 PF00583 Acetyltransferase (GNAT) family KM393_20275 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KM393_20280 PF06207 Protein of unknown function (DUF1002) KM393_20290 PF03323 Bacillus/Clostridium GerA spore germination protein KM393_20295 PF14097 Stage V sporulation protein AE1 KM393_20300 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KM393_20305 PF07451 Stage V sporulation protein AD (SpoVAD) KM393_20310 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KM393_20315 PF13782 Stage V sporulation protein AB KM393_20320 PF12164 Stage V sporulation protein AA KM393_20330 PF00209 Sodium:neurotransmitter symporter family KM393_20335 PF04545 Sigma-70, region 4 KM393_20335 PF04539 Sigma-70 region 3 KM393_20335 PF04542 Sigma-70 region 2 KM393_20340 PF13581 Histidine kinase-like ATPase domain KM393_20345 PF01740 STAS domain KM393_20350 PF07943 Penicillin-binding protein 5, C-terminal domain KM393_20350 PF00768 D-alanyl-D-alanine carboxypeptidase KM393_20355 PF00392 Bacterial regulatory proteins, gntR family KM393_20360 PF00005 ABC transporter KM393_20375 PF01047 MarR family KM393_20385 PF00860 Permease family KM393_20390 PF01544 CorA-like Mg2+ transporter protein KM393_20395 PF02885 Glycosyl transferase family, helical bundle domain KM393_20395 PF00591 Glycosyl transferase family, a/b domain KM393_20395 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain KM393_20400 PF01048 Phosphorylase superfamily KM393_20405 PF01676 Metalloenzyme superfamily KM393_20415 PF02899 Phage integrase, N-terminal SAM-like domain KM393_20415 PF00589 Phage integrase family KM393_20420 PF14004 Protein of unknown function (DUF4227) KM393_20425 PF01475 Ferric uptake regulator family KM393_20430 PF01944 Stage II sporulation protein M KM393_20440 PF00293 NUDIX domain KM393_20445 PF13072 Mother cell inhibitor of FtsZ KM393_20450 PF00248 Aldo/keto reductase family KM393_20455 PF00248 Aldo/keto reductase family KM393_20460 PF13673 Acetyltransferase (GNAT) domain KM393_20460 PF04229 GrpB protein KM393_20470 PF00746 LPXTG cell wall anchor motif KM393_20470 PF00149 Calcineurin-like phosphoesterase KM393_20470 PF00565 Staphylococcal nuclease homologue KM393_20470 PF02872 5'-nucleotidase, C-terminal domain KM393_20480 PF12146 Serine aminopeptidase, S33 KM393_20485 PF13726 Na+-H+ antiporter family KM393_20485 PF03553 Na+/H+ antiporter family KM393_20490 PF00356 Bacterial regulatory proteins, lacI family KM393_20495 PF00583 Acetyltransferase (GNAT) family KM393_20500 PF12146 Serine aminopeptidase, S33 KM393_20505 PF10827 Protein of unknown function (DUF2552) KM393_20515 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM393_20515 PF01872 RibD C-terminal domain KM393_20520 PF00677 Lumazine binding domain KM393_20525 PF00925 GTP cyclohydrolase II KM393_20525 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KM393_20530 PF00885 6,7-dimethyl-8-ribityllumazine synthase KM393_20540 PF04055 Radical SAM superfamily KM393_20540 PF06968 Biotin and Thiamin Synthesis associated domain KM393_20545 PF13847 Methyltransferase domain KM393_20550 PF12697 Alpha/beta hydrolase family KM393_20550 PF08241 Methyltransferase domain KM393_20555 PF00155 Aminotransferase class I and II KM393_20565 PF00202 Aminotransferase class-III KM393_20575 PF03553 Na+/H+ antiporter family KM393_20580 PF02872 5'-nucleotidase, C-terminal domain KM393_20580 PF00149 Calcineurin-like phosphoesterase KM393_20590 PF01037 Lrp/AsnC ligand binding domain KM393_20590 PF13404 AsnC-type helix-turn-helix domain KM393_20605 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KM393_20605 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KM393_20610 PF00202 Aminotransferase class-III KM393_20615 PF00696 Amino acid kinase family KM393_20620 PF01960 ArgJ family KM393_20625 PF02774 Semialdehyde dehydrogenase, dimerisation domain KM393_20625 PF01118 Semialdehyde dehydrogenase, NAD binding domain KM393_20635 PF00106 short chain dehydrogenase KM393_20645 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM393_20645 PF03807 NADP oxidoreductase coenzyme F420-dependent KM393_20650 PF03313 Serine dehydratase alpha chain KM393_20655 PF03315 Serine dehydratase beta chain KM393_20655 PF01842 ACT domain KM393_20665 PF00753 Metallo-beta-lactamase superfamily KM393_20665 PF12706 Beta-lactamase superfamily domain KM393_20675 PF00817 impB/mucB/samB family KM393_20675 PF11799 impB/mucB/samB family C-terminal domain KM393_20675 PF11798 IMS family HHH motif KM393_20685 PF07687 Peptidase dimerisation domain KM393_20685 PF01546 Peptidase family M20/M25/M40 KM393_20690 PF13302 Acetyltransferase (GNAT) domain KM393_20705 PF03734 L,D-transpeptidase catalytic domain KM393_20710 PF11728 Putative aromatic acid exporter C-terminal domain KM393_20710 PF06081 Aromatic acid exporter family member 1 KM393_20715 PF00005 ABC transporter KM393_20720 PF00528 Binding-protein-dependent transport system inner membrane component KM393_20725 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM393_20730 PF06491 Disulphide isomerase KM393_20735 PF11208 Protein of unknown function (DUF2992) KM393_20745 PF01098 Cell cycle protein KM393_20750 PF02817 e3 binding domain KM393_20750 PF00364 Biotin-requiring enzyme KM393_20750 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM393_20755 PF02780 Transketolase, C-terminal domain KM393_20755 PF02779 Transketolase, pyrimidine binding domain KM393_20760 PF00676 Dehydrogenase E1 component KM393_20765 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM393_20765 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM393_20770 PF00871 Acetokinase family KM393_20775 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KM393_20775 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KM393_20780 PF01515 Phosphate acetyl/butaryl transferase KM393_20785 PF02954 Bacterial regulatory protein, Fis family KM393_20785 PF00989 PAS fold KM393_20785 PF00158 Sigma-54 interaction domain KM393_20795 PF03009 Glycerophosphoryl diester phosphodiesterase family KM393_20800 PF14174 YycC-like protein KM393_20810 PF00072 Response regulator receiver domain KM393_20810 PF08769 Sporulation initiation factor Spo0A C terminal KM393_20815 PF05580 SpoIVB peptidase S55 KM393_20815 PF17820 PDZ domain KM393_20820 PF13476 AAA domain KM393_20825 PF01316 Arginine repressor, DNA binding domain KM393_20825 PF02863 Arginine repressor, C-terminal domain KM393_20830 PF01728 FtsJ-like methyltransferase KM393_20830 PF01479 S4 domain KM393_20835 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KM393_20835 PF02780 Transketolase, C-terminal domain KM393_20835 PF02779 Transketolase, pyrimidine binding domain KM393_20840 PF00348 Polyprenyl synthetase KM393_20845 PF02609 Exonuclease VII small subunit KM393_20850 PF13742 OB-fold nucleic acid binding domain KM393_20850 PF02601 Exonuclease VII, large subunit KM393_20855 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KM393_20855 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KM393_20860 PF01029 NusB family KM393_20865 PF03780 Asp23 family, cell envelope-related function KM393_20870 PF00289 Biotin carboxylase, N-terminal domain KM393_20870 PF02785 Biotin carboxylase C-terminal domain KM393_20870 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM393_20875 PF00364 Biotin-requiring enzyme KM393_20885 PF12685 SpoIIIAH-like protein KM393_20895 PF09581 Stage III sporulation protein AF (Spore_III_AF) KM393_20900 PF09546 Stage III sporulation protein AE (spore_III_AE) KM393_20905 PF06686 Stage III sporulation protein AC/AD protein family KM393_20910 PF06686 Stage III sporulation protein AC/AD protein family KM393_20915 PF09548 Stage III sporulation protein AB (spore_III_AB) KM393_20940 PF01132 Elongation factor P (EF-P) OB domain KM393_20940 PF08207 Elongation factor P (EF-P) KOW-like domain KM393_20940 PF09285 Elongation factor P, C-terminal KM393_20945 PF00557 Metallopeptidase family M24 KM393_20945 PF01321 Creatinase/Prolidase N-terminal domain KM393_20950 PF01220 Dehydroquinase class II KM393_20955 PF11085 Conserved membrane protein YqhR KM393_20960 PF07136 Protein of unknown function (DUF1385) KM393_20970 PF13419 Haloacid dehalogenase-like hydrolase KM393_20975 PF01325 Iron dependent repressor, N-terminal DNA binding domain KM393_20975 PF02742 Iron dependent repressor, metal binding and dimerisation domain KM393_20990 PF03099 Biotin/lipoate A/B protein ligase family KM393_20995 PF00581 Rhodanese-like domain KM393_21000 PF00356 Bacterial regulatory proteins, lacI family KM393_21000 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KM393_21010 PF00893 Small Multidrug Resistance protein KM393_21015 PF00893 Small Multidrug Resistance protein KM393_21050 PF00005 ABC transporter KM393_21055 PF00392 Bacterial regulatory proteins, gntR family KM393_21070 PF02347 Glycine cleavage system P-protein KM393_21075 PF02347 Glycine cleavage system P-protein KM393_21080 PF08669 Glycine cleavage T-protein C-terminal barrel domain KM393_21080 PF01571 Aminomethyltransferase folate-binding domain KM393_21085 PF00176 SNF2 family N-terminal domain KM393_21085 PF00271 Helicase conserved C-terminal domain KM393_21090 PF11079 Bacterial protein YqhG of unknown function KM393_21110 PF14038 YqzE-like protein KM393_21115 PF01202 Shikimate kinase KM393_21140 PF07963 Prokaryotic N-terminal methylation motif KM393_21150 PF00482 Type II secretion system (T2SS), protein F KM393_21155 PF00437 Type II/IV secretion system protein KM393_21165 PF11117 Protein of unknown function (DUF2626) KM393_21170 PF00375 Sodium:dicarboxylate symporter family KM393_21205 PF03033 Glycosyltransferase family 28 N-terminal domain KM393_21205 PF04101 Glycosyltransferase family 28 C-terminal domain KM393_21210 PF02310 B12 binding domain KM393_21210 PF02574 Homocysteine S-methyltransferase KM393_21210 PF00809 Pterin binding enzyme KM393_21210 PF02965 Vitamin B12 dependent methionine synthase, activation domain KM393_21210 PF02607 B12 binding domain KM393_21215 PF02219 Methylenetetrahydrofolate reductase KM393_21215 PF02574 Homocysteine S-methyltransferase KM393_21220 PF01053 Cys/Met metabolism PLP-dependent enzyme KM393_21225 PF01053 Cys/Met metabolism PLP-dependent enzyme KM393_21235 PF01022 Bacterial regulatory protein, arsR family KM393_21245 PF00753 Metallo-beta-lactamase superfamily KM393_21250 PF10958 Protein of unknown function (DUF2759) KM393_21255 PF00480 ROK family KM393_21260 PF06014 Bacterial protein of unknown function (DUF910) KM393_21265 PF01812 5-formyltetrahydrofolate cyclo-ligase family KM393_21270 PF00471 Ribosomal protein L33 KM393_21275 PF00483 Nucleotidyl transferase KM393_21280 PF01895 PhoU domain KM393_21285 PF00005 ABC transporter KM393_21290 PF00528 Binding-protein-dependent transport system inner membrane component KM393_21295 PF00528 Binding-protein-dependent transport system inner membrane component KM393_21300 PF12849 PBP superfamily domain KM393_21305 PF03717 Penicillin-binding Protein dimerisation domain KM393_21305 PF00905 Penicillin binding protein transpeptidase domain KM393_21310 PF07690 Major Facilitator Superfamily KM393_21315 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KM393_21315 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KM393_21335 PF04551 GcpE protein KM393_21340 PF01475 Ferric uptake regulator family KM393_21345 PF00950 ABC 3 transport family KM393_21350 PF00005 ABC transporter KM393_21355 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM393_21355 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM393_21360 PF11116 Protein of unknown function (DUF2624) KM393_21365 PF01261 Xylose isomerase-like TIM barrel KM393_21370 PF00270 DEAD/DEAH box helicase KM393_21370 PF00271 Helicase conserved C-terminal domain KM393_21380 PF02401 LytB protein KM393_21385 PF01784 NIF3 (NGG1p interacting factor 3) KM393_21390 PF04816 tRNA (adenine(22)-N(1))-methyltransferase KM393_21395 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KM393_21400 PF04545 Sigma-70, region 4 KM393_21400 PF04542 Sigma-70 region 2 KM393_21400 PF03979 Sigma-70 factor, region 1.1 KM393_21400 PF04539 Sigma-70 region 3 KM393_21400 PF00140 Sigma-70 factor, region 1.2 KM393_21405 PF10410 DnaB-helicase binding domain of primase KM393_21405 PF08275 DNA primase catalytic core, N-terminal domain KM393_21405 PF01807 CHC2 zinc finger KM393_21410 PF03618 Kinase/pyrophosphorylase KM393_21415 PF00571 CBS domain KM393_21415 PF08279 HTH domain KM393_21420 PF02565 Recombination protein O C terminal KM393_21420 PF11967 Recombination protein O N terminal KM393_21430 PF01926 50S ribosome-binding GTPase KM393_21430 PF07650 KH domain KM393_21435 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM393_21440 PF01219 Prokaryotic diacylglycerol kinase KM393_21445 PF02130 Uncharacterized protein family UPF0054 KM393_21455 PF02562 PhoH-like protein KM393_21460 PF06898 Putative stage IV sporulation protein YqfD KM393_21465 PF07873 YabP family KM393_21470 PF09424 Yqey-like protein KM393_21475 PF01165 Ribosomal protein S21 KM393_21480 PF04055 Radical SAM superfamily KM393_21480 PF01938 TRAM domain KM393_21480 PF00919 Uncharacterized protein family UPF0004 KM393_21485 PF04452 RNA methyltransferase KM393_21495 PF00226 DnaJ domain KM393_21495 PF01556 DnaJ C terminal domain KM393_21495 PF00684 DnaJ central domain KM393_21500 PF00012 Hsp70 protein KM393_21505 PF01025 GrpE KM393_21510 PF01628 HrcA protein C terminal domain KM393_21515 PF06969 HemN C-terminal domain KM393_21515 PF04055 Radical SAM superfamily KM393_21520 PF01638 HxlR-like helix-turn-helix KM393_21525 PF00679 Elongation factor G C-terminus KM393_21525 PF00009 Elongation factor Tu GTP binding domain KM393_21525 PF03144 Elongation factor Tu domain 2 KM393_21525 PF06421 GTP-binding protein LepA C-terminus KM393_21535 PF03418 Germination protease KM393_21540 PF01649 Ribosomal protein S20 KM393_21545 PF06144 DNA polymerase III, delta subunit KM393_21550 PF14141 YqzM-like protein KM393_21555 PF00753 Metallo-beta-lactamase superfamily KM393_21555 PF13567 Domain of unknown function (DUF4131) KM393_21555 PF03772 Competence protein KM393_21560 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM393_21565 PF10531 SLBB domain KM393_21570 PF03807 NADP oxidoreductase coenzyme F420-dependent KM393_21570 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM393_21575 PF13649 Methyltransferase domain KM393_21585 PF01966 HD domain KM393_21590 PF01467 Cytidylyltransferase-like KM393_21595 PF01985 CRS1 / YhbY (CRM) domain KM393_21600 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KM393_21600 PF01488 Shikimate / quinate 5-dehydrogenase KM393_21600 PF08501 Shikimate dehydrogenase substrate binding domain KM393_21605 PF01926 50S ribosome-binding GTPase KM393_21620 PF02666 Phosphatidylserine decarboxylase KM393_21625 PF04542 Sigma-70 region 2 KM393_21625 PF04545 Sigma-70, region 4 KM393_21635 PF16244 Domain of unknown function (DUF4901) KM393_21640 PF00471 Ribosomal protein L33 KM393_21645 PF00881 Nitroreductase family KM393_21650 PF04607 Region found in RelA / SpoT proteins KM393_21660 PF00245 Alkaline phosphatase KM393_21670 PF00561 alpha/beta hydrolase fold KM393_21670 PF08386 TAP-like protein KM393_21705 PF05922 Peptidase inhibitor I9 KM393_21705 PF13860 FlgD Ig-like domain KM393_21705 PF02225 PA domain KM393_21705 PF00082 Subtilase family KM393_21710 PF00351 Biopterin-dependent aromatic amino acid hydroxylase KM393_21725 PF07681 DoxX KM393_21755 PF00005 ABC transporter KM393_21760 PF01032 FecCD transport family KM393_21765 PF01497 Periplasmic binding protein KM393_21770 PF14143 YrhC-like protein KM393_21775 PF00465 Iron-containing alcohol dehydrogenase KM393_21775 PF00171 Aldehyde dehydrogenase family KM393_21780 PF01053 Cys/Met metabolism PLP-dependent enzyme KM393_21785 PF00291 Pyridoxal-phosphate dependent enzyme KM393_21790 PF01048 Phosphorylase superfamily KM393_21795 PF08241 Methyltransferase domain KM393_21810 PF00905 Penicillin binding protein transpeptidase domain KM393_21810 PF03717 Penicillin-binding Protein dimerisation domain KM393_21815 PF03449 Transcription elongation factor, N-terminal KM393_21815 PF01272 Transcription elongation factor, GreA/GreB, C-term KM393_21820 PF00485 Phosphoribulokinase / Uridine kinase family KM393_21825 PF01136 Peptidase family U32 KM393_21825 PF16325 Peptidase family U32 C-terminal domain KM393_21830 PF01136 Peptidase family U32 KM393_21835 PF01596 O-methyltransferase KM393_21840 PF02618 YceG-like family KM393_21845 PF06949 Protein of unknown function (DUF1292) KM393_21850 PF03652 Holliday junction resolvase KM393_21855 PF06135 IreB regulatory phosphoprotein KM393_21860 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM393_21860 PF02272 DHHA1 domain KM393_21860 PF01411 tRNA synthetases class II (A) KM393_21870 PF01594 AI-2E family transporter KM393_21890 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain KM393_21890 PF13538 UvrD-like helicase C-terminal domain KM393_21890 PF14490 Helix-hairpin-helix containing domain KM393_21905 PF00266 Aminotransferase class-V KM393_21910 PF02082 Transcriptional regulator KM393_21915 PF16193 AAA C-terminal domain KM393_21915 PF12002 MgsA AAA+ ATPase C terminal KM393_21915 PF05496 Holliday junction DNA helicase RuvB P-loop domain KM393_21925 PF00899 ThiF family KM393_21930 PF00152 tRNA synthetases class II (D, K and N) KM393_21930 PF02938 GAD domain KM393_21930 PF01336 OB-fold nucleic acid binding domain KM393_21935 PF03129 Anticodon binding domain KM393_21935 PF13393 Histidyl-tRNA synthetase KM393_21945 PF02580 D-Tyr-tRNA(Tyr) deacylase KM393_21950 PF13291 ACT domain KM393_21950 PF04607 Region found in RelA / SpoT proteins KM393_21950 PF02824 TGS domain KM393_21955 PF00156 Phosphoribosyl transferase domain KM393_21960 PF17768 RecJ OB domain KM393_21960 PF01368 DHH family KM393_21960 PF10141 Single-strand DNA-specific exonuclease, C terminal domain KM393_21960 PF02272 DHHA1 domain KM393_21965 PF16916 Dimerisation domain of Zinc Transporter KM393_21965 PF01545 Cation efflux family KM393_21970 PF07549 SecD/SecF GG Motif KM393_21970 PF02355 Protein export membrane protein KM393_21975 PF13797 Post-transcriptional regulator KM393_21980 PF14667 Polysaccharide biosynthesis C-terminal domain KM393_21980 PF01943 Polysaccharide biosynthesis protein KM393_21985 PF04239 Protein of unknown function (DUF421) KM393_21995 PF02699 Preprotein translocase subunit KM393_22000 PF01702 Queuine tRNA-ribosyltransferase KM393_22005 PF02547 Queuosine biosynthesis protein KM393_22010 PF11146 Protein of unknown function (DUF2905) KM393_22015 PF17864 RuvB AAA lid domain KM393_22015 PF05491 RuvB C-terminal winged helix domain KM393_22015 PF05496 Holliday junction DNA helicase RuvB P-loop domain KM393_22020 PF07499 RuvA, C-terminal domain KM393_22020 PF01330 RuvA N terminal domain KM393_22025 PF01497 Periplasmic binding protein KM393_22035 PF00892 EamA-like transporter family KM393_22040 PF00892 EamA-like transporter family KM393_22045 PF01022 Bacterial regulatory protein, arsR family KM393_22060 PF01476 LysM domain KM393_22065 PF02445 Quinolinate synthetase A protein KM393_22070 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KM393_22070 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KM393_22075 PF02910 Fumarate reductase flavoprotein C-term KM393_22075 PF00890 FAD binding domain KM393_22080 PF00266 Aminotransferase class-V KM393_22085 PF02829 3H domain KM393_22085 PF08279 HTH domain KM393_22090 PF03475 3-alpha domain KM393_22090 PF03473 MOSC domain KM393_22095 PF01842 ACT domain KM393_22095 PF00800 Prephenate dehydratase KM393_22100 PF02687 FtsX-like permease family KM393_22105 PF02687 FtsX-like permease family KM393_22110 PF00005 ABC transporter KM393_22120 PF00486 Transcriptional regulatory protein, C terminal KM393_22120 PF00072 Response regulator receiver domain KM393_22125 PF01018 GTP1/OBG KM393_22125 PF09269 Domain of unknown function (DUF1967) KM393_22125 PF01926 50S ribosome-binding GTPase KM393_22130 PF14682 Sporulation initiation phospho-transferase B, C-terminal KM393_22130 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KM393_22135 PF01016 Ribosomal L27 protein KM393_22140 PF04327 Cysteine protease Prp KM393_22145 PF00829 Ribosomal prokaryotic L21 protein KM393_22150 PF10150 Ribonuclease E/G family KM393_22150 PF00575 S1 RNA binding domain KM393_22155 PF02163 Peptidase family M50 KM393_22160 PF01551 Peptidase family M23 KM393_22165 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KM393_22170 PF03775 Septum formation inhibitor MinC, C-terminal domain KM393_22180 PF04085 rod shape-determining protein MreC KM393_22190 PF04002 RadC-like JAB domain KM393_22195 PF02545 Maf-like protein KM393_22205 PF02875 Mur ligase family, glutamate ligase domain KM393_22205 PF08245 Mur ligase middle domain KM393_22210 PF08264 Anticodon-binding domain of tRNA KM393_22210 PF00133 tRNA synthetases class I (I, L, M and V) KM393_22210 PF10458 Valyl tRNA synthetase tRNA binding arm KM393_22220 PF01476 LysM domain KM393_22225 PF00202 Aminotransferase class-III KM393_22230 PF00490 Delta-aminolevulinic acid dehydratase KM393_22235 PF02602 Uroporphyrinogen-III synthase HemD KM393_22240 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KM393_22240 PF03900 Porphobilinogen deaminase, C-terminal domain KM393_22245 PF01578 Cytochrome C assembly protein KM393_22250 PF01488 Shikimate / quinate 5-dehydrogenase KM393_22250 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KM393_22250 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KM393_22255 PF01047 MarR family KM393_22260 PF02566 OsmC-like protein KM393_22265 PF01926 50S ribosome-binding GTPase KM393_22270 PF05362 Lon protease (S16) C-terminal proteolytic domain KM393_22270 PF02190 ATP-dependent protease La (LON) substrate-binding domain KM393_22270 PF00004 ATPase family associated with various cellular activities (AAA) KM393_22275 PF00004 ATPase family associated with various cellular activities (AAA) KM393_22275 PF05362 Lon protease (S16) C-terminal proteolytic domain KM393_22280 PF10431 C-terminal, D2-small domain, of ClpB protein KM393_22280 PF06689 ClpX C4-type zinc finger KM393_22280 PF07724 AAA domain (Cdc48 subfamily) KM393_22285 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KM393_22285 PF05698 Bacterial trigger factor protein (TF) C-terminus KM393_22285 PF05697 Bacterial trigger factor protein (TF) KM393_22300 PF11724 YvbH-like oligomerisation region KM393_22300 PF08000 Bacterial PH domain KM393_22320 PF12850 Calcineurin-like phosphoesterase superfamily domain KM393_22325 PF01725 Ham1 family KM393_22330 PF01138 3' exoribonuclease family, domain 1 KM393_22330 PF03725 3' exoribonuclease family, domain 2 KM393_22335 PF10646 Sporulation and spore germination KM393_22340 PF01177 Asp/Glu/Hydantoin racemase KM393_22345 PF07690 Major Facilitator Superfamily KM393_22355 PF00440 Bacterial regulatory proteins, tetR family KM393_22370 PF00196 Bacterial regulatory proteins, luxR family KM393_22375 PF00860 Permease family KM393_22385 PF07969 Amidohydrolase family KM393_22390 PF07969 Amidohydrolase family KM393_22395 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM393_22400 PF00528 Binding-protein-dependent transport system inner membrane component KM393_22400 PF12911 N-terminal TM domain of oligopeptide transport permease C KM393_22405 PF00528 Binding-protein-dependent transport system inner membrane component KM393_22410 PF00005 ABC transporter KM393_22410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM393_22415 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM393_22415 PF00005 ABC transporter KM393_22420 PF07694 5TMR of 5TMR-LYT KM393_22420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_22420 PF06580 Histidine kinase KM393_22425 PF00072 Response regulator receiver domain KM393_22425 PF04397 LytTr DNA-binding domain KM393_22440 PF04024 PspC domain KM393_22445 PF01381 Helix-turn-helix KM393_22445 PF07883 Cupin domain KM393_22450 PF13536 Putative multidrug resistance efflux transporter KM393_22455 PF00230 Major intrinsic protein KM393_22460 PF02082 Transcriptional regulator KM393_22470 PF00005 ABC transporter KM393_22470 PF13732 Domain of unknown function (DUF4162) KM393_22475 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) KM393_22485 PF01618 MotA/TolQ/ExbB proton channel family KM393_22490 PF02557 D-alanyl-D-alanine carboxypeptidase KM393_22495 PF03061 Thioesterase superfamily KM393_22500 PF13183 4Fe-4S dicluster domain KM393_22500 PF13085 2Fe-2S iron-sulfur cluster binding domain KM393_22505 PF00890 FAD binding domain KM393_22505 PF02910 Fumarate reductase flavoprotein C-term KM393_22510 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KM393_22515 PF10702 Protein of unknown function (DUF2507) KM393_22520 PF08459 UvrC Helix-hairpin-helix N-terminal KM393_22520 PF02151 UvrB/uvrC motif KM393_22520 PF01541 GIY-YIG catalytic domain KM393_22525 PF00085 Thioredoxin KM393_22530 PF01012 Electron transfer flavoprotein domain KM393_22530 PF00766 Electron transfer flavoprotein FAD-binding domain KM393_22535 PF01012 Electron transfer flavoprotein domain KM393_22540 PF00378 Enoyl-CoA hydratase/isomerase KM393_22545 PF08359 YsiA-like protein, C-terminal region KM393_22545 PF00440 Bacterial regulatory proteins, tetR family KM393_22550 PF00501 AMP-binding enzyme KM393_22550 PF13193 AMP-binding enzyme C-terminal domain KM393_22560 PF01497 Periplasmic binding protein KM393_22565 PF01032 FecCD transport family KM393_22570 PF05163 DinB family KM393_22600 PF00005 ABC transporter KM393_22605 PF00512 His Kinase A (phospho-acceptor) domain KM393_22605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_22610 PF00072 Response regulator receiver domain KM393_22610 PF00486 Transcriptional regulatory protein, C terminal KM393_22620 PF09962 Uncharacterized conserved protein (DUF2196) KM393_22625 PF10672 S-adenosylmethionine-dependent methyltransferase KM393_22625 PF17785 PUA-like domain KM393_22635 PF03992 Antibiotic biosynthesis monooxygenase KM393_22640 PF04203 Sortase domain KM393_22645 PF00005 ABC transporter KM393_22650 PF01032 FecCD transport family KM393_22655 PF01497 Periplasmic binding protein KM393_22660 PF05031 Iron Transport-associated domain KM393_22670 PF05031 Iron Transport-associated domain KM393_22675 PF05525 Branched-chain amino acid transport protein KM393_22680 PF01479 S4 domain KM393_22680 PF00849 RNA pseudouridylate synthase KM393_22685 PF00488 MutS domain V KM393_22685 PF01713 Smr domain KM393_22690 PF14791 DNA polymerase beta thumb KM393_22690 PF14716 Helix-hairpin-helix domain KM393_22690 PF02811 PHP domain KM393_22695 PF02674 Colicin V production protein KM393_22700 PF05164 Cell division protein ZapA KM393_22705 PF11858 Domain of unknown function (DUF3378) KM393_22705 PF01351 Ribonuclease HII KM393_22725 PF00152 tRNA synthetases class II (D, K and N) KM393_22725 PF01336 OB-fold nucleic acid binding domain KM393_22730 PF03483 B3/4 domain KM393_22730 PF03484 tRNA synthetase B5 domain KM393_22730 PF03147 Ferredoxin-fold anticodon binding domain KM393_22730 PF01588 Putative tRNA binding domain KM393_22730 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KM393_22735 PF01409 tRNA synthetases class II core domain (F) KM393_22735 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KM393_22740 PF08032 RNA 2'-O ribose methyltransferase substrate binding KM393_22740 PF00588 SpoU rRNA Methylase family KM393_22745 PF14098 Small, acid-soluble spore protein I KM393_22750 PF01966 HD domain KM393_22775 PF07690 Major Facilitator Superfamily KM393_22785 PF00440 Bacterial regulatory proteins, tetR family KM393_22785 PF16859 Tetracyclin repressor-like, C-terminal domain KM393_22790 PF05343 M42 glutamyl aminopeptidase KM393_22800 PF00453 Ribosomal protein L20 KM393_22805 PF01632 Ribosomal protein L35 KM393_22810 PF05198 Translation initiation factor IF-3, N-terminal domain KM393_22810 PF00707 Translation initiation factor IF-3, C-terminal domain KM393_22815 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM393_22815 PF02824 TGS domain KM393_22815 PF03129 Anticodon binding domain KM393_22815 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM393_22820 PF08812 YtxC-like family KM393_22825 PF07319 Primosomal protein DnaI N-terminus KM393_22825 PF01695 IstB-like ATP binding protein KM393_22830 PF07261 Replication initiation and membrane attachment KM393_22835 PF03477 ATP cone domain KM393_22840 PF02675 S-adenosylmethionine decarboxylase KM393_22845 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KM393_22845 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KM393_22850 PF01121 Dephospho-CoA kinase KM393_22855 PF02659 Putative manganese efflux pump KM393_22860 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KM393_22860 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KM393_22860 PF06827 Zinc finger found in FPG and IleRS KM393_22865 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KM393_22865 PF01367 5'-3' exonuclease, C-terminal SAM fold KM393_22865 PF00476 DNA polymerase family A KM393_22870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_22870 PF00512 His Kinase A (phospho-acceptor) domain KM393_22870 PF00989 PAS fold KM393_22870 PF16736 Single Cache-like KM393_22875 PF00072 Response regulator receiver domain KM393_22875 PF00486 Transcriptional regulatory protein, C terminal KM393_22890 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KM393_22890 PF00056 lactate/malate dehydrogenase, NAD binding domain KM393_22895 PF00180 Isocitrate/isopropylmalate dehydrogenase KM393_22900 PF00285 Citrate synthase, C-terminal domain KM393_22905 PF04284 Protein of unknown function (DUF441) KM393_22910 PF01594 AI-2E family transporter KM393_22915 PF04186 FxsA cytoplasmic membrane protein KM393_22920 PF00391 PEP-utilising enzyme, mobile domain KM393_22920 PF00224 Pyruvate kinase, barrel domain KM393_22920 PF02887 Pyruvate kinase, alpha/beta domain KM393_22925 PF00365 Phosphofructokinase KM393_22930 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KM393_22935 PF01039 Carboxyl transferase domain KM393_22935 PF17848 Acetyl-coA carboxylase zinc finger domain KM393_22940 PF00392 Bacterial regulatory proteins, gntR family KM393_22945 PF03949 Malic enzyme, NAD binding domain KM393_22945 PF00390 Malic enzyme, N-terminal domain KM393_22950 PF01336 OB-fold nucleic acid binding domain KM393_22950 PF02811 PHP domain KM393_22950 PF14579 Helix-hairpin-helix motif KM393_22950 PF07733 Bacterial DNA polymerase III alpha NTPase domain KM393_22950 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KM393_22955 PF14034 Sporulation protein YtrH KM393_22965 PF01368 DHH family KM393_22965 PF02272 DHHA1 domain KM393_22970 PF14007 YtpI-like protein KM393_22985 PF07085 DRTGG domain KM393_22985 PF03061 Thioesterase superfamily KM393_22985 PF00571 CBS domain KM393_22985 PF00392 Bacterial regulatory proteins, gntR family KM393_23000 PF00557 Metallopeptidase family M24 KM393_23000 PF01321 Creatinase/Prolidase N-terminal domain KM393_23005 PF11518 Protein of unknown function (DUF3221) KM393_23035 PF12746 GNAT acetyltransferase KM393_23040 PF07883 Cupin domain KM393_23050 PF01381 Helix-turn-helix KM393_23060 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KM393_23060 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KM393_23070 PF00582 Universal stress protein family KM393_23090 PF14698 Argininosuccinate lyase C-terminal KM393_23090 PF00206 Lyase KM393_23095 PF00764 Arginosuccinate synthase KM393_23110 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM393_23110 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM393_23115 PF12787 EcsC protein family KM393_23130 PF00871 Acetokinase family KM393_23135 PF02384 N-6 DNA Methylase KM393_23140 PF08534 Redoxin KM393_23145 PF09579 Sporulation protein YtfJ (Spore_YtfJ) KM393_23155 PF01513 ATP-NAD kinase KM393_23160 PF07969 Amidohydrolase family KM393_23170 PF13193 AMP-binding enzyme C-terminal domain KM393_23170 PF00501 AMP-binding enzyme KM393_23175 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM393_23180 PF02568 Thiamine biosynthesis protein (ThiI) KM393_23180 PF02926 THUMP domain KM393_23185 PF00266 Aminotransferase class-V KM393_23190 PF06160 Septation ring formation regulator, EzrA KM393_23195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM393_23195 PF03466 LysR substrate binding domain KM393_23200 PF00892 EamA-like transporter family KM393_23210 PF13185 GAF domain KM393_23215 PF01053 Cys/Met metabolism PLP-dependent enzyme KM393_23220 PF00163 Ribosomal protein S4/S9 N-terminal domain KM393_23220 PF01479 S4 domain KM393_23235 PF01479 S4 domain KM393_23235 PF00579 tRNA synthetases class I (W and Y) KM393_23245 PF08281 Sigma-70, region 4 KM393_23245 PF04542 Sigma-70 region 2 KM393_23255 PF00501 AMP-binding enzyme KM393_23255 PF13193 AMP-binding enzyme C-terminal domain KM393_23260 PF00583 Acetyltransferase (GNAT) family KM393_23265 PF00571 CBS domain KM393_23270 PF00850 Histone deacetylase domain KM393_23280 PF00072 Response regulator receiver domain KM393_23280 PF00486 Transcriptional regulatory protein, C terminal KM393_23285 PF13426 PAS domain KM393_23285 PF00672 HAMP domain KM393_23285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_23285 PF00512 His Kinase A (phospho-acceptor) domain KM393_23290 PF12796 Ankyrin repeats (3 copies) KM393_23295 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM393_23300 PF01741 Large-conductance mechanosensitive channel, MscL KM393_23325 PF00356 Bacterial regulatory proteins, lacI family KM393_23330 PF07537 CamS sex pheromone cAM373 precursor KM393_23335 PF11009 Protein of unknown function (DUF2847) KM393_23345 PF02073 Thermophilic metalloprotease (M29) KM393_23365 PF13302 Acetyltransferase (GNAT) domain KM393_23370 PF01225 Mur ligase family, catalytic domain KM393_23370 PF02875 Mur ligase family, glutamate ligase domain KM393_23370 PF08245 Mur ligase middle domain KM393_23380 PF17854 FtsK alpha domain KM393_23380 PF09397 Ftsk gamma domain KM393_23380 PF01580 FtsK/SpoIIIE family KM393_23390 PF14794 Domain of unknown function (DUF4479) KM393_23390 PF01588 Putative tRNA binding domain KM393_23395 PF07285 Protein of unknown function (DUF1444) KM393_23400 PF00085 Thioredoxin KM393_23405 PF01931 Protein of unknown function DUF84 KM393_23410 PF05343 M42 glutamyl aminopeptidase KM393_23420 PF00753 Metallo-beta-lactamase superfamily KM393_23425 PF02390 Putative methyltransferase KM393_23430 PF14165 YtzH-like protein KM393_23435 PF01636 Phosphotransferase enzyme family KM393_23440 PF00128 Alpha amylase, catalytic domain KM393_23440 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KM393_23440 PF17999 Pullulanase N1-terminal domain KM393_23445 PF02834 LigT like Phosphoesterase KM393_23455 PF08220 DeoR-like helix-turn-helix domain KM393_23460 PF01479 S4 domain KM393_23460 PF00849 RNA pseudouridylate synthase KM393_23465 PF14667 Polysaccharide biosynthesis C-terminal domain KM393_23465 PF01943 Polysaccharide biosynthesis protein KM393_23475 PF07690 Major Facilitator Superfamily KM393_23480 PF01022 Bacterial regulatory protein, arsR family KM393_23485 PF08327 Activator of Hsp90 ATPase homolog 1-like protein KM393_23495 PF10957 Sporulation protein Cse60 KM393_23505 PF02559 CarD-like/TRCF domain KM393_23515 PF06800 Sugar transport protein KM393_23530 PF02391 MoaE protein KM393_23535 PF03205 Molybdopterin guanine dinucleotide synthesis protein B KM393_23540 PF00994 Probable molybdopterin binding domain KM393_23540 PF03454 MoeA C-terminal region (domain IV) KM393_23540 PF03453 MoeA N-terminal region (domain I and II) KM393_23545 PF01967 MoaC family KM393_23550 PF00899 ThiF family KM393_23575 PF00581 Rhodanese-like domain KM393_23585 PF00561 alpha/beta hydrolase fold KM393_23590 PF03323 Bacillus/Clostridium GerA spore germination protein KM393_23595 PF03845 Spore germination protein KM393_23620 PF08264 Anticodon-binding domain of tRNA KM393_23620 PF00133 tRNA synthetases class I (I, L, M and V) KM393_23620 PF13603 Leucyl-tRNA synthetase, Domain 2 KM393_23620 PF09334 tRNA synthetases class I (M) KM393_23625 PF07690 Major Facilitator Superfamily KM393_23630 PF00999 Sodium/hydrogen exchanger family KM393_23635 PF02080 TrkA-C domain KM393_23640 PF00589 Phage integrase family KM393_23650 PF00005 ABC transporter KM393_23655 PF07786 Protein of unknown function (DUF1624) KM393_23655 PF04235 Protein of unknown function (DUF418) KM393_23665 PF10732 Protein of unknown function (DUF2524) KM393_23670 PF04055 Radical SAM superfamily KM393_23670 PF16199 Radical_SAM C-terminal domain KM393_23675 PF06962 Putative rRNA methylase KM393_23680 PF00005 ABC transporter KM393_23680 PF13732 Domain of unknown function (DUF4162) KM393_23690 PF01177 Asp/Glu/Hydantoin racemase KM393_23705 PF10776 Protein of unknown function (DUF2600) KM393_23710 PF12146 Serine aminopeptidase, S33 KM393_23715 PF00132 Bacterial transferase hexapeptide (six repeats) KM393_23720 PF01569 PAP2 superfamily KM393_23725 PF13439 Glycosyltransferase Family 4 KM393_23725 PF00534 Glycosyl transferases group 1 KM393_23730 PF12804 MobA-like NTP transferase domain KM393_23735 PF00994 Probable molybdopterin binding domain KM393_23750 PF02772 S-adenosylmethionine synthetase, central domain KM393_23750 PF02773 S-adenosylmethionine synthetase, C-terminal domain KM393_23750 PF00438 S-adenosylmethionine synthetase, N-terminal domain KM393_23755 PF01293 Phosphoenolpyruvate carboxykinase KM393_23790 PF01784 NIF3 (NGG1p interacting factor 3) KM393_23795 PF00989 PAS fold KM393_23795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_23795 PF00512 His Kinase A (phospho-acceptor) domain KM393_23800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_23800 PF00512 His Kinase A (phospho-acceptor) domain KM393_23800 PF00989 PAS fold KM393_23800 PF08447 PAS fold KM393_23805 PF08386 TAP-like protein KM393_23805 PF00561 alpha/beta hydrolase fold KM393_23810 PF00884 Sulfatase KM393_23830 PF00005 ABC transporter KM393_23835 PF00528 Binding-protein-dependent transport system inner membrane component KM393_23860 PF00293 NUDIX domain KM393_23880 PF02664 S-Ribosylhomocysteinase (LuxS) KM393_23885 PF01809 Putative membrane protein insertion efficiency factor KM393_23890 PF00484 Carbonic anhydrase KM393_23895 PF01654 Cytochrome bd terminal oxidase subunit I KM393_23900 PF02322 Cytochrome bd terminal oxidase subunit II KM393_23905 PF10676 Spore germination protein gerPA/gerPF KM393_23920 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM393_23920 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM393_23945 PF04012 PspA/IM30 family KM393_23960 PF07670 Nucleoside recognition KM393_23960 PF17910 FeoB cytosolic helical domain KM393_23960 PF07664 Ferrous iron transport protein B C terminus KM393_23960 PF02421 Ferrous iron transport protein B KM393_23970 PF09515 Thiamine transporter protein (Thia_YuaJ) KM393_23975 PF00672 HAMP domain KM393_23975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_23975 PF00512 His Kinase A (phospho-acceptor) domain KM393_23980 PF00486 Transcriptional regulatory protein, C terminal KM393_23980 PF00072 Response regulator receiver domain KM393_24005 PF00156 Phosphoribosyl transferase domain KM393_24010 PF00781 Diacylglycerol kinase catalytic domain KM393_24030 PF00248 Aldo/keto reductase family KM393_24045 PF09335 SNARE associated Golgi protein KM393_24050 PF00398 Ribosomal RNA adenine dimethylase KM393_24055 PF02687 FtsX-like permease family KM393_24060 PF00005 ABC transporter KM393_24065 PF12833 Helix-turn-helix domain KM393_24065 PF06445 GyrI-like small molecule binding domain KM393_24070 PF00072 Response regulator receiver domain KM393_24070 PF00486 Transcriptional regulatory protein, C terminal KM393_24075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_24080 PF02687 FtsX-like permease family KM393_24090 PF02687 FtsX-like permease family KM393_24095 PF00005 ABC transporter KM393_24110 PF02447 GntP family permease KM393_24115 PF00392 Bacterial regulatory proteins, gntR family KM393_24115 PF07702 UTRA domain KM393_24125 PF07071 KDGP aldolase KM393_24130 PF03841 L-seryl-tRNA selenium transferase KM393_24135 PF01979 Amidohydrolase family KM393_24150 PF02557 D-alanyl-D-alanine carboxypeptidase KM393_24155 PF00512 His Kinase A (phospho-acceptor) domain KM393_24155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_24160 PF00486 Transcriptional regulatory protein, C terminal KM393_24160 PF00072 Response regulator receiver domain KM393_24165 PF13378 Enolase C-terminal domain-like KM393_24165 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KM393_24170 PF13193 AMP-binding enzyme C-terminal domain KM393_24170 PF00501 AMP-binding enzyme KM393_24175 PF00378 Enoyl-CoA hydratase/isomerase KM393_24180 PF00561 alpha/beta hydrolase fold KM393_24185 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM393_24185 PF16582 Middle domain of thiamine pyrophosphate KM393_24185 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM393_24190 PF00425 chorismate binding enzyme KM393_24195 PF01040 UbiA prenyltransferase family KM393_24200 PF01258 Prokaryotic dksA/traR C4-type zinc finger KM393_24205 PF00313 'Cold-shock' DNA-binding domain KM393_24220 PF00343 Carbohydrate phosphorylase KM393_24225 PF00534 Glycosyl transferases group 1 KM393_24225 PF08323 Starch synthase catalytic domain KM393_24230 PF00483 Nucleotidyl transferase KM393_24235 PF00483 Nucleotidyl transferase KM393_24240 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KM393_24240 PF00128 Alpha amylase, catalytic domain KM393_24240 PF02806 Alpha amylase, C-terminal all-beta domain KM393_24255 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KM393_24255 PF00056 lactate/malate dehydrogenase, NAD binding domain KM393_24350 PF05697 Bacterial trigger factor protein (TF) KM393_24350 PF05698 Bacterial trigger factor protein (TF) C-terminus KM393_24385 PF02308 MgtC family KM393_24390 PF02254 TrkA-N domain KM393_24390 PF07885 Ion channel KM393_24395 PF08868 YugN-like family KM393_24400 PF00342 Phosphoglucose isomerase KM393_24405 PF04070 Domain of unknown function (DUF378) KM393_24410 PF00575 S1 RNA binding domain KM393_24415 PF00155 Aminotransferase class I and II KM393_24420 PF01037 Lrp/AsnC ligand binding domain KM393_24425 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KM393_24425 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KM393_24430 PF00561 alpha/beta hydrolase fold KM393_24430 PF08386 TAP-like protein KM393_24440 PF00155 Aminotransferase class I and II KM393_24455 PF08810 Kinase associated protein B KM393_24460 PF00929 Exonuclease KM393_24465 PF03600 Citrate transporter KM393_24480 PF03129 Anticodon binding domain KM393_24480 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM393_24485 PF03061 Thioesterase superfamily KM393_24495 PF02632 BioY family KM393_24505 PF00483 Nucleotidyl transferase KM393_24510 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KM393_24510 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KM393_24510 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KM393_24510 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KM393_24515 PF02457 DisA bacterial checkpoint controller nucleotide-binding KM393_24515 PF10372 Bacterial membrane-spanning protein N-terminus KM393_24520 PF00883 Cytosol aminopeptidase family, catalytic domain KM393_24520 PF02789 Cytosol aminopeptidase family, N-terminal domain KM393_24525 PF06725 3D domain KM393_24535 PF00293 NUDIX domain KM393_24535 PF13344 Haloacid dehalogenase-like hydrolase KM393_24540 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM393_24545 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM393_24555 PF06445 GyrI-like small molecule binding domain KM393_24570 PF04463 Protein of unknown function (DUF523) KM393_24590 PF01521 Iron-sulphur cluster biosynthesis KM393_24595 PF01678 Diaminopimelate epimerase KM393_24600 PF07293 Protein of unknown function (DUF1450) KM393_24605 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM393_24615 PF09383 NIL domain KM393_24615 PF00005 ABC transporter KM393_24620 PF03649 Uncharacterised protein family (UPF0014) KM393_24625 PF03831 PhnA domain KM393_24625 PF08274 PhnA Zinc-Ribbon KM393_24660 PF13427 Domain of unknown function (DUF4111) KM393_24660 PF01909 Nucleotidyltransferase domain KM393_24665 PF07315 Protein of unknown function (DUF1462) KM393_24670 PF01106 NifU-like domain KM393_24685 PF04608 Phosphatidylglycerophosphatase A KM393_24695 PF02525 Flavodoxin-like fold KM393_24700 PF13344 Haloacid dehalogenase-like hydrolase KM393_24710 PF01934 Protein of unknown function DUF86 KM393_24715 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded KM393_24730 PF06265 Protein of unknown function (DUF1027) KM393_24735 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) KM393_24740 PF07739 TipAS antibiotic-recognition domain KM393_24740 PF13411 MerR HTH family regulatory protein KM393_24745 PF10086 YhfC intramembrane metalloprotease KM393_24765 PF04055 Radical SAM superfamily KM393_24765 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family KM393_24770 PF01551 Peptidase family M23 KM393_24780 PF08827 Domain of unknown function (DUF1805) KM393_24785 PF02872 5'-nucleotidase, C-terminal domain KM393_24790 PF03551 Transcriptional regulator PadR-like family KM393_24795 PF04892 VanZ like family KM393_24800 PF01458 Uncharacterized protein family (UPF0051) KM393_24805 PF01592 NifU-like N terminal domain KM393_24810 PF00266 Aminotransferase class-V KM393_24815 PF01458 Uncharacterized protein family (UPF0051) KM393_24820 PF00005 ABC transporter KM393_24825 PF03180 NLPA lipoprotein KM393_24830 PF03180 NLPA lipoprotein KM393_24835 PF00528 Binding-protein-dependent transport system inner membrane component KM393_24840 PF00005 ABC transporter KM393_24840 PF09383 NIL domain KM393_24850 PF00085 Thioredoxin KM393_24855 PF01751 Toprim domain KM393_24860 PF01597 Glycine cleavage H-protein KM393_24865 PF03960 ArsC family KM393_24910 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KM393_24910 PF00056 lactate/malate dehydrogenase, NAD binding domain KM393_24930 PF00440 Bacterial regulatory proteins, tetR family KM393_24930 PF13305 Tetracyclin repressor-like, C-terminal domain KM393_24935 PF00753 Metallo-beta-lactamase superfamily KM393_24940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM393_24940 PF02770 Acyl-CoA dehydrogenase, middle domain KM393_24940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM393_24945 PF02803 Thiolase, C-terminal domain KM393_24945 PF00108 Thiolase, N-terminal domain KM393_24950 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KM393_24950 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KM393_24950 PF00378 Enoyl-CoA hydratase/isomerase KM393_24955 PF14115 YuzL-like protein KM393_24960 PF07943 Penicillin-binding protein 5, C-terminal domain KM393_24960 PF00768 D-alanyl-D-alanine carboxypeptidase KM393_24965 PF01619 Proline dehydrogenase KM393_24970 PF10835 Protein of unknown function (DUF2573) KM393_24975 PF01910 Thiamine-binding protein KM393_24980 PF00672 HAMP domain KM393_24980 PF02743 Cache domain KM393_24980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM393_25000 PF07690 Major Facilitator Superfamily KM393_25005 PF13520 Amino acid permease KM393_25015 PF02096 60Kd inner membrane protein KM393_25025 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM393_25025 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM393_25060 PF09335 SNARE associated Golgi protein KM393_25070 PF17969 L,D-transpeptidase C-terminal domain KM393_25070 PF03734 L,D-transpeptidase catalytic domain KM393_25075 PF00072 Response regulator receiver domain KM393_25075 PF00486 Transcriptional regulatory protein, C terminal KM393_25080 PF00989 PAS fold KM393_25080 PF00512 His Kinase A (phospho-acceptor) domain KM393_25080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_25080 PF16736 Single Cache-like KM393_25090 PF08264 Anticodon-binding domain of tRNA KM393_25090 PF09334 tRNA synthetases class I (M) KM393_25100 PF02743 Cache domain KM393_25100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM393_25100 PF00672 HAMP domain KM393_25105 PF01883 Iron-sulfur cluster assembly protein KM393_25110 PF01447 Thermolysin metallopeptidase, catalytic domain KM393_25110 PF02868 Thermolysin metallopeptidase, alpha-helical domain KM393_25110 PF07504 Fungalysin/Thermolysin Propeptide Motif KM393_25110 PF03413 Peptidase propeptide and YPEB domain KM393_25115 PF02678 Pirin KM393_25115 PF17954 Quercetinase C-terminal cupin domain KM393_25120 PF01047 MarR family KM393_25130 PF00999 Sodium/hydrogen exchanger family KM393_25135 PF02080 TrkA-C domain KM393_25140 PF01235 Sodium:alanine symporter family KM393_25145 PF00210 Ferritin-like domain KM393_25160 PF03641 Possible lysine decarboxylase KM393_25170 PF00210 Ferritin-like domain KM393_25180 PF07662 Na+ dependent nucleoside transporter C-terminus KM393_25180 PF01773 Na+ dependent nucleoside transporter N-terminus KM393_25185 PF07662 Na+ dependent nucleoside transporter C-terminus KM393_25185 PF01773 Na+ dependent nucleoside transporter N-terminus KM393_25190 PF01235 Sodium:alanine symporter family KM393_25195 PF01235 Sodium:alanine symporter family KM393_25200 PF13460 NAD(P)H-binding KM393_25215 PF00248 Aldo/keto reductase family KM393_25220 PF07690 Major Facilitator Superfamily KM393_25225 PF01638 HxlR-like helix-turn-helix KM393_25230 PF07849 Protein of unknown function (DUF1641) KM393_25235 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM393_25240 PF01479 S4 domain KM393_25240 PF00579 tRNA synthetases class I (W and Y) KM393_25245 PF01565 FAD binding domain KM393_25245 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KM393_25255 PF00672 HAMP domain KM393_25255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM393_25255 PF17202 Single cache domain 3 KM393_25265 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KM393_25270 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KM393_25285 PF13302 Acetyltransferase (GNAT) domain KM393_25290 PF06146 Phosphate-starvation-inducible E KM393_25305 PF00005 ABC transporter KM393_25310 PF01032 FecCD transport family KM393_25315 PF01032 FecCD transport family KM393_25325 PF00486 Transcriptional regulatory protein, C terminal KM393_25325 PF00072 Response regulator receiver domain KM393_25335 PF01668 SmpB protein KM393_25340 PF08206 Ribonuclease B OB domain KM393_25340 PF00773 RNB domain KM393_25340 PF17876 Cold shock domain KM393_25340 PF00575 S1 RNA binding domain KM393_25345 PF12146 Serine aminopeptidase, S33 KM393_25350 PF03840 Preprotein translocase SecG subunit KM393_25355 PF04172 LrgB-like family KM393_25360 PF03788 LrgA family KM393_25455 PF04860 Phage portal protein KM393_25480 PF02899 Phage integrase, N-terminal SAM-like domain KM393_25480 PF00589 Phage integrase family KM393_25485 PF00113 Enolase, C-terminal TIM barrel domain KM393_25485 PF03952 Enolase, N-terminal domain KM393_25490 PF01676 Metalloenzyme superfamily KM393_25490 PF06415 BPG-independent PGAM N-terminus (iPGM_N) KM393_25495 PF00121 Triosephosphate isomerase KM393_25500 PF00162 Phosphoglycerate kinase KM393_25505 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KM393_25505 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KM393_25510 PF04198 Putative sugar-binding domain KM393_25520 PF00309 Sigma-54 factor, Activator interacting domain (AID) KM393_25520 PF04963 Sigma-54 factor, core binding domain KM393_25520 PF04552 Sigma-54, DNA binding domain KM393_25540 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KM393_25545 PF07451 Stage V sporulation protein AD (SpoVAD) KM393_25550 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KM393_25560 PF04239 Protein of unknown function (DUF421) KM393_25565 PF00574 Clp protease KM393_25570 PF00381 PTS HPr component phosphorylation site KM393_25575 PF02650 WhiA C-terminal HTH domain KM393_25575 PF14527 WhiA LAGLIDADG-like domain KM393_25575 PF10298 WhiA N-terminal LAGLIDADG-like domain KM393_25580 PF01933 Uncharacterised protein family UPF0052 KM393_25585 PF03668 P-loop ATPase protein family KM393_25590 PF00293 NUDIX domain KM393_25600 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM393_25610 PF14602 Hexapeptide repeat of succinyl-transferase KM393_25615 PF13419 Haloacid dehalogenase-like hydrolase KM393_25620 PF01790 Prolipoprotein diacylglyceryl transferase KM393_25625 PF07475 HPr Serine kinase C-terminal domain KM393_25625 PF02603 HPr Serine kinase N terminus KM393_25630 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV KM393_25640 PF00005 ABC transporter KM393_25640 PF17755 UvrA DNA-binding domain KM393_25640 PF17760 UvrA interaction domain KM393_25645 PF00271 Helicase conserved C-terminal domain KM393_25645 PF04851 Type III restriction enzyme, res subunit KM393_25645 PF02151 UvrB/uvrC motif KM393_25645 PF12344 Ultra-violet resistance protein B KM393_25645 PF17757 UvrB interaction domain KM393_25650 PF07282 Putative transposase DNA-binding domain KM393_25650 PF12323 Helix-turn-helix domain KM393_25650 PF01385 Probable transposase KM393_25665 PF07739 TipAS antibiotic-recognition domain KM393_25665 PF13411 MerR HTH family regulatory protein KM393_25690 PF03601 Conserved hypothetical protein 698 KM393_25695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM393_25695 PF03466 LysR substrate binding domain KM393_25700 PF13411 MerR HTH family regulatory protein KM393_25705 PF03358 NADPH-dependent FMN reductase KM393_25710 PF00005 ABC transporter KM393_25710 PF12848 ABC transporter KM393_25720 PF00005 ABC transporter KM393_25720 PF00664 ABC transporter transmembrane region KM393_25725 PF17820 PDZ domain KM393_25730 PF17820 PDZ domain KM393_25730 PF03572 Peptidase family S41 KM393_25730 PF01471 Putative peptidoglycan binding domain KM393_25735 PF02687 FtsX-like permease family KM393_25735 PF18075 FtsX extracellular domain KM393_25740 PF00005 ABC transporter KM393_25745 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KM393_25755 PF01043 SecA preprotein cross-linking domain KM393_25755 PF02810 SEC-C motif KM393_25755 PF07516 SecA Wing and Scaffold domain KM393_25755 PF07517 SecA DEAD-like domain KM393_25760 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KM393_25760 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus KM393_25765 PF00313 'Cold-shock' DNA-binding domain KM393_25775 PF00271 Helicase conserved C-terminal domain KM393_25775 PF04851 Type III restriction enzyme, res subunit KM393_25780 PF01476 LysM domain KM393_25780 PF00877 NlpC/P60 family KM393_25785 PF01638 HxlR-like helix-turn-helix KM393_25790 PF02645 Uncharacterised protein, DegV family COG1307 KM393_25795 PF09186 Domain of unknown function (DUF1949) KM393_25795 PF01205 Uncharacterized protein family UPF0029 KM393_25800 PF03816 Cell envelope-related transcriptional attenuator domain KM393_25805 PF02350 UDP-N-acetylglucosamine 2-epimerase KM393_25810 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM393_25810 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM393_25810 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM393_25815 PF00953 Glycosyl transferase family 4 KM393_25820 PF01522 Polysaccharide deacetylase KM393_25825 PF03610 PTS system fructose IIA component KM393_25825 PF00874 PRD domain KM393_25825 PF00158 Sigma-54 interaction domain KM393_25835 PF02417 Chromate transporter KM393_25840 PF04794 YdjC-like protein KM393_25845 PF11975 Family 4 glycosyl hydrolase C-terminal domain KM393_25845 PF02056 Family 4 glycosyl hydrolase KM393_25850 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KM393_25855 PF02378 Phosphotransferase system, EIIC KM393_25860 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KM393_25870 PF02675 S-adenosylmethionine decarboxylase KM393_25875 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KM393_25880 PF02378 Phosphotransferase system, EIIC KM393_25885 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KM393_25890 PF00375 Sodium:dicarboxylate symporter family KM393_25900 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM393_25910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM393_25910 PF03466 LysR substrate binding domain KM393_25930 PF01654 Cytochrome bd terminal oxidase subunit I KM393_25935 PF02322 Cytochrome bd terminal oxidase subunit II KM393_25940 PF02040 Arsenical pump membrane protein KM393_25945 PF13667 ThiC-associated domain KM393_25945 PF01964 Radical SAM ThiC family KM393_25950 PF02652 L-lactate permease KM393_25960 PF09988 Uncharacterized metal-binding protein (DUF2227) KM393_25970 PF00884 Sulfatase KM393_25975 PF01063 Amino-transferase class IV KM393_25985 PF07662 Na+ dependent nucleoside transporter C-terminus KM393_25985 PF01773 Na+ dependent nucleoside transporter N-terminus KM393_26000 PF02028 BCCT, betaine/carnitine/choline family transporter KM393_26005 PF06725 3D domain KM393_26005 PF01476 LysM domain KM393_26030 PF04434 SWIM zinc finger KM393_26035 PF12419 SNF2 Helicase protein KM393_26035 PF00271 Helicase conserved C-terminal domain KM393_26035 PF00176 SNF2 family N-terminal domain KM393_26065 PF04542 Sigma-70 region 2 KM393_26065 PF04545 Sigma-70, region 4 KM393_26070 PF04893 Yip1 domain KM393_26075 PF02687 FtsX-like permease family KM393_26075 PF12704 MacB-like periplasmic core domain KM393_26080 PF00005 ABC transporter KM393_26100 PF07690 Major Facilitator Superfamily KM393_26115 PF18719 ArlS sensor domain KM393_26115 PF00512 His Kinase A (phospho-acceptor) domain KM393_26115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_26120 PF00072 Response regulator receiver domain KM393_26120 PF00486 Transcriptional regulatory protein, C terminal KM393_26125 PF16363 GDP-mannose 4,6 dehydratase KM393_26130 PF03816 Cell envelope-related transcriptional attenuator domain KM393_26135 PF07977 FabA-like domain KM393_26140 PF02350 UDP-N-acetylglucosamine 2-epimerase KM393_26145 PF08239 Bacterial SH3 domain KM393_26145 PF00005 ABC transporter KM393_26150 PF01061 ABC-2 type transporter KM393_26155 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM393_26155 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM393_26155 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM393_26200 PF12116 Stage III sporulation protein D KM393_26215 PF01551 Peptidase family M23 KM393_26225 PF00005 ABC transporter KM393_26235 PF08486 Stage II sporulation protein KM393_26240 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KM393_26250 PF06612 Protein of unknown function (DUF1146) KM393_26255 PF00361 Proton-conducting membrane transporter KM393_26260 PF00361 Proton-conducting membrane transporter KM393_26265 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus KM393_26265 PF00361 Proton-conducting membrane transporter KM393_26265 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KM393_26270 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KM393_26275 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 KM393_26285 PF00146 NADH dehydrogenase KM393_26290 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit KM393_26295 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit KM393_26300 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit KM393_26305 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 KM393_26310 PF03707 Bacterial signalling protein N terminal repeat KM393_26310 PF00990 Diguanylate cyclase, GGDEF domain KM393_26310 PF00563 EAL domain KM393_26325 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KM393_26325 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain KM393_26330 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM393_26330 PF02874 ATP synthase alpha/beta family, beta-barrel domain KM393_26335 PF00231 ATP synthase KM393_26340 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM393_26340 PF00306 ATP synthase alpha/beta chain, C terminal domain KM393_26340 PF02874 ATP synthase alpha/beta family, beta-barrel domain KM393_26345 PF00213 ATP synthase delta (OSCP) subunit KM393_26350 PF00430 ATP synthase B/B' CF(0) KM393_26355 PF00137 ATP synthase subunit C KM393_26360 PF00119 ATP synthase A chain KM393_26365 PF03899 ATP synthase I chain KM393_26385 PF00464 Serine hydroxymethyltransferase KM393_26390 PF04260 Protein of unknown function (DUF436) KM393_26395 PF02502 Ribose/Galactose Isomerase KM393_26400 PF01451 Low molecular weight phosphotyrosine protein phosphatase KM393_26405 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KM393_26410 PF07681 DoxX KM393_26415 PF01613 Flavin reductase like domain KM393_26425 PF02659 Putative manganese efflux pump KM393_26430 PF01300 Telomere recombination KM393_26430 PF03481 Putative GTP-binding controlling metal-binding KM393_26440 PF09551 Stage II sporulation protein R (spore_II_R) KM393_26445 PF17827 PrmC N-terminal domain KM393_26445 PF13847 Methyltransferase domain KM393_26450 PF03462 PCRF domain KM393_26450 PF00472 RF-1 domain KM393_26455 PF00265 Thymidine kinase KM393_26460 PF01197 Ribosomal protein L31 KM393_26465 PF07497 Rho termination factor, RNA-binding domain KM393_26465 PF07498 Rho termination factor, N-terminal domain KM393_26465 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM393_26470 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded KM393_26475 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KM393_26480 PF01116 Fructose-bisphosphate aldolase class-II KM393_26485 PF00072 Response regulator receiver domain KM393_26490 PF10740 Domain of unknown function (DUF2529) KM393_26495 PF06418 CTP synthase N-terminus KM393_26495 PF00117 Glutamine amidotransferase class-I KM393_26500 PF05066 HB1, ASXL, restriction endonuclease HTH domain KM393_26510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM393_26510 PF02770 Acyl-CoA dehydrogenase, middle domain KM393_26510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM393_26515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM393_26515 PF02770 Acyl-CoA dehydrogenase, middle domain KM393_26515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM393_26520 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KM393_26520 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KM393_26525 PF02803 Thiolase, C-terminal domain KM393_26525 PF00108 Thiolase, N-terminal domain KM393_26530 PF02754 Cysteine-rich domain KM393_26530 PF13183 4Fe-4S dicluster domain KM393_26535 PF13091 PLD-like domain KM393_26540 PF03851 UV-endonuclease UvdE KM393_26545 PF03707 Bacterial signalling protein N terminal repeat KM393_26545 PF00990 Diguanylate cyclase, GGDEF domain KM393_26545 PF00563 EAL domain KM393_26565 PF00196 Bacterial regulatory proteins, luxR family KM393_26565 PF00072 Response regulator receiver domain KM393_26570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_26570 PF07730 Histidine kinase KM393_26580 PF00005 ABC transporter KM393_26585 PF00557 Metallopeptidase family M24 KM393_26595 PF02225 PA domain KM393_26595 PF04389 Peptidase family M28 KM393_26615 PF08281 Sigma-70, region 4 KM393_26615 PF04542 Sigma-70 region 2 KM393_26620 PF03485 Arginyl tRNA synthetase N terminal domain KM393_26620 PF05746 DALR anticodon binding domain KM393_26620 PF00750 tRNA synthetases class I (R) KM393_26625 PF09148 Domain of unknown function (DUF1934) KM393_26630 PF17676 LD-carboxypeptidase C-terminal domain KM393_26630 PF02016 LD-carboxypeptidase N-terminal domain KM393_26645 PF00491 Arginase family KM393_26650 PF17284 Spermidine synthase tetramerisation domain KM393_26655 PF07690 Major Facilitator Superfamily KM393_26660 PF13411 MerR HTH family regulatory protein KM393_26665 PF03009 Glycerophosphoryl diester phosphodiesterase family KM393_26670 PF00912 Transglycosylase KM393_26670 PF00905 Penicillin binding protein transpeptidase domain KM393_26675 PF08741 YwhD family KM393_26680 PF02163 Peptidase family M50 KM393_26685 PF01361 Tautomerase enzyme KM393_26690 PF01966 HD domain KM393_26695 PF01497 Periplasmic binding protein KM393_26700 PF00005 ABC transporter KM393_26705 PF01032 FecCD transport family KM393_26715 PF07293 Protein of unknown function (DUF1450) KM393_26730 PF03099 Biotin/lipoate A/B protein ligase family KM393_26735 PF01515 Phosphate acetyl/butaryl transferase KM393_26740 PF06778 Chlorite dismutase KM393_26745 PF07943 Penicillin-binding protein 5, C-terminal domain KM393_26745 PF00768 D-alanyl-D-alanine carboxypeptidase KM393_26750 PF07486 Cell Wall Hydrolase KM393_26755 PF09671 Spore coat protein (Spore_GerQ) KM393_26760 PF04241 Protein of unknown function (DUF423) KM393_26770 PF02254 TrkA-N domain KM393_26770 PF07885 Ion channel KM393_26775 PF00860 Permease family KM393_26785 PF12823 Domain of unknown function (DUF3817) KM393_26790 PF03167 Uracil DNA glycosylase superfamily KM393_26795 PF12679 ABC-2 family transporter protein KM393_26800 PF00005 ABC transporter KM393_26805 PF13472 GDSL-like Lipase/Acylhydrolase family KM393_26810 PF00356 Bacterial regulatory proteins, lacI family KM393_26810 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KM393_26820 PF03447 Homoserine dehydrogenase, NAD binding domain KM393_26820 PF00742 Homoserine dehydrogenase KM393_26820 PF01842 ACT domain KM393_26825 PF04204 Homoserine O-succinyltransferase KM393_26830 PF01053 Cys/Met metabolism PLP-dependent enzyme KM393_26840 PF13419 Haloacid dehalogenase-like hydrolase KM393_26845 PF00027 Cyclic nucleotide-binding domain KM393_26850 PF02525 Flavodoxin-like fold KM393_26855 PF00072 Response regulator receiver domain KM393_26855 PF00196 Bacterial regulatory proteins, luxR family KM393_26865 PF08543 Phosphomethylpyrimidine kinase KM393_26870 PF00990 Diguanylate cyclase, GGDEF domain KM393_26870 PF07694 5TMR of 5TMR-LYT KM393_26875 PF04328 Selenoprotein, putative KM393_26880 PF02554 Carbon starvation protein CstA KM393_26880 PF13722 5TM C-terminal transporter carbon starvation CstA KM393_26885 PF04397 LytTr DNA-binding domain KM393_26885 PF00072 Response regulator receiver domain KM393_26890 PF07690 Major Facilitator Superfamily KM393_26895 PF03808 Glycosyl transferase WecB/TagA/CpsF family KM393_26910 PF03458 UPF0126 domain KM393_26915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM393_26925 PF03061 Thioesterase superfamily KM393_26935 PF00535 Glycosyl transferase family 2 KM393_26940 PF00005 ABC transporter KM393_26940 PF12848 ABC transporter KM393_26960 PF00535 Glycosyl transferase family 2 KM393_26965 PF00440 Bacterial regulatory proteins, tetR family KM393_26970 PF00873 AcrB/AcrD/AcrF family KM393_26975 PF01625 Peptide methionine sulfoxide reductase KM393_26975 PF01641 SelR domain KM393_26980 PF01594 AI-2E family transporter KM393_26985 PF04172 LrgB-like family KM393_26990 PF03788 LrgA family KM393_26995 PF04397 LytTr DNA-binding domain KM393_26995 PF00072 Response regulator receiver domain KM393_27000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_27000 PF06580 Histidine kinase KM393_27000 PF13492 GAF domain KM393_27000 PF07694 5TMR of 5TMR-LYT KM393_27005 PF07690 Major Facilitator Superfamily KM393_27010 PF02028 BCCT, betaine/carnitine/choline family transporter KM393_27015 PF02898 Nitric oxide synthase, oxygenase domain KM393_27020 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KM393_27020 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KM393_27030 PF02293 AmiS/UreI family transporter KM393_27040 PF16363 GDP-mannose 4,6 dehydratase KM393_27045 PF03006 Haemolysin-III related KM393_27055 PF00270 DEAD/DEAH box helicase KM393_27055 PF00271 Helicase conserved C-terminal domain KM393_27055 PF03880 DbpA RNA binding domain KM393_27065 PF00478 IMP dehydrogenase / GMP reductase domain KM393_27070 PF08439 Oligopeptidase F KM393_27070 PF01432 Peptidase family M3 KM393_27080 PF02590 Predicted SPOUT methyltransferase KM393_27090 PF13180 PDZ domain KM393_27095 PF00753 Metallo-beta-lactamase superfamily KM393_27100 PF09648 YycH protein KM393_27105 PF07435 YycH protein KM393_27110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM393_27110 PF00512 His Kinase A (phospho-acceptor) domain KM393_27110 PF00672 HAMP domain KM393_27110 PF13426 PAS domain KM393_27115 PF00072 Response regulator receiver domain KM393_27115 PF00486 Transcriptional regulatory protein, C terminal KM393_27140 PF00709 Adenylosuccinate synthetase KM393_27145 PF03796 DnaB-like helicase C terminal domain KM393_27145 PF00772 DnaB-like helicase N terminal domain KM393_27150 PF01281 Ribosomal protein L9, N-terminal domain KM393_27150 PF03948 Ribosomal protein L9, C-terminal domain KM393_27155 PF02272 DHHA1 domain KM393_27155 PF01368 DHH family KM393_27160 PF09991 Predicted membrane protein (DUF2232) KM393_27165 PF01084 Ribosomal protein S18 KM393_27170 PF00436 Single-strand binding protein family KM393_27175 PF01250 Ribosomal protein S6 KM393_27180 PF06071 Protein of unknown function (DUF933) KM393_27180 PF01926 50S ribosome-binding GTPase KM393_27185 PF06107 Bacterial protein of unknown function (DUF951) KM393_27190 PF00924 Mechanosensitive ion channel KM393_27195 PF06866 Protein of unknown function (DUF1256) KM393_27200 PF17762 HTH domain found in ParB protein KM393_27200 PF02195 ParB-like nuclease domain KM393_27205 PF13614 AAA domain KM393_27210 PF17762 HTH domain found in ParB protein KM393_27210 PF02195 ParB-like nuclease domain KM393_27215 PF02527 rRNA small subunit methyltransferase G KM393_27220 PF13932 GidA associated domain KM393_27220 PF01134 Glucose inhibited division protein A KM393_27225 PF10396 GTP-binding protein TrmE N-terminus KM393_27225 PF12631 MnmE helical domain KM393_27225 PF01926 50S ribosome-binding GTPase KM393_27230 PF01424 R3H domain KM393_27230 PF14804 Jag N-terminus KM393_27235 PF02096 60Kd inner membrane protein KM393_27240 PF00825 Ribonuclease P KM393_27245 PF00468 Ribosomal protein L34 KM393_27250 PF08708 Primase C terminal 1 (PriCT-1) KM393_27270 PF17362 Family of unknown function KM393_27285 PF17631 Family of unknown function (DUF5512) KM393_27325 PF00437 Type II/IV secretion system protein KM393_27355 PF04956 TrbC/VIRB2 family KM393_27370 PF12696 TraM recognition site of TraD and TraG KM393_27405 PF00877 NlpC/P60 family KM393_27415 PF17632 Family of unknown function (DUF5513) KM393_27440 PF17633 Family of unknown function (DUF5514) KM393_27445 PF17630 Family of unknown function (DUF5511) KM393_27450 PF18840 Large polyvalent protein associated domain 25 KM393_27465 PF13154 Protein of unknown function (DUF3991) KM393_27470 PF01131 DNA topoisomerase KM393_27470 PF01751 Toprim domain KM393_27505 PF17443 Uncharacterized protein pXO2-72 KM393_27525 PF11799 impB/mucB/samB family C-terminal domain KM393_27525 PF00817 impB/mucB/samB family KM393_27525 PF11798 IMS family HHH motif KM393_27530 PF13411 MerR HTH family regulatory protein KM393_27530 PF13152 Protein of unknown function (DUF3967) KM393_27535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM393_27565 PF08280 M protein trans-acting positive regulator (MGA) HTH domain KM393_27565 PF00874 PRD domain KM393_27565 PF05043 Mga helix-turn-helix domain KM393_27575 PF01810 LysE type translocator KM393_27585 PF05043 Mga helix-turn-helix domain KM393_27585 PF08279 HTH domain KM393_27585 PF00874 PRD domain KM393_27590 PF09385 Histidine kinase N terminal KM393_27600 PF10502 Signal peptidase, peptidase S26 KM393_27615 PF01022 Bacterial regulatory protein, arsR family KM393_27625 PF08245 Mur ligase middle domain KM393_27630 PF14102 Capsule biosynthesis CapC KM393_27635 PF09587 Bacterial capsule synthesis protein PGA_cap KM393_27655 PF05043 Mga helix-turn-helix domain KM393_27655 PF08280 M protein trans-acting positive regulator (MGA) HTH domain KM393_27665 PF01569 PAP2 superfamily KM393_27675 PF00440 Bacterial regulatory proteins, tetR family KM393_27680 PF04463 Protein of unknown function (DUF523) KM393_27685 PF02517 CPBP intramembrane metalloprotease KM393_27690 PF01906 Putative heavy-metal-binding KM393_27705 PF00395 S-layer homology domain KM393_27705 PF01520 N-acetylmuramoyl-L-alanine amidase KM393_27720 PF13614 AAA domain