locus-tag class description KM398_00005 PF00308 Bacterial dnaA protein KM398_00005 PF08299 Bacterial dnaA protein helix-turn-helix KM398_00005 PF11638 DnaA N-terminal domain KM398_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain KM398_00010 PF02767 DNA polymerase III beta subunit, central domain KM398_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain KM398_00020 PF02463 RecF/RecN/SMC N terminal domain KM398_00025 PF01751 Toprim domain KM398_00025 PF00204 DNA gyrase B KM398_00025 PF00986 DNA gyrase B subunit, carboxyl terminus KM398_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_00030 PF03989 DNA gyrase C-terminal domain, beta-propeller KM398_00030 PF00521 DNA gyrase/topoisomerase IV, subunit A KM398_00060 PF14175 YaaC-like Protein KM398_00065 PF00478 IMP dehydrogenase / GMP reductase domain KM398_00065 PF00571 CBS domain KM398_00070 PF00768 D-alanyl-D-alanine carboxypeptidase KM398_00070 PF07943 Penicillin-binding protein 5, C-terminal domain KM398_00075 PF01680 SOR/SNZ family KM398_00080 PF01174 SNO glutamine amidotransferase family KM398_00085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM398_00085 PF02403 Seryl-tRNA synthetase N-terminal domain KM398_00100 PF01712 Deoxynucleoside kinase KM398_00105 PF01712 Deoxynucleoside kinase KM398_00110 PF00857 Isochorismatase family KM398_00115 PF14437 MafB19-like deaminase KM398_00125 PF12169 DNA polymerase III subunits gamma and tau domain III KM398_00130 PF02575 YbaB/EbfC DNA-binding family KM398_00135 PF13662 Toprim domain KM398_00135 PF02132 RecR protein KM398_00140 PF10704 Protein of unknown function (DUF2508) KM398_00145 PF07441 SigmaK-factor processing regulatory protein BofA KM398_00180 PF01276 Orn/Lys/Arg decarboxylase, major domain KM398_00180 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KM398_00185 PF02223 Thymidylate kinase KM398_00190 PF09115 DNA polymerase III, delta subunit, C terminal KM398_00195 PF04468 PSP1 C-terminal conserved region KM398_00200 PF06156 Initiation control protein YabA KM398_00205 PF05175 Methyltransferase small domain KM398_00210 PF01541 GIY-YIG catalytic domain KM398_00215 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM398_00220 PF18277 AbrB C-terminal domain KM398_00220 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KM398_00225 PF08264 Anticodon-binding domain of tRNA KM398_00225 PF09334 tRNA synthetases class I (M) KM398_00225 PF01588 Putative tRNA binding domain KM398_00230 PF01026 TatD related DNase KM398_00235 PF13662 Toprim domain KM398_00235 PF13331 Domain of unknown function (DUF4093) KM398_00240 PF00398 Ribosomal RNA adenine dimethylase KM398_00245 PF05582 YabG peptidase U57 KM398_00250 PF06257 Biofilm formation stimulator VEG KM398_00255 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM398_00260 PF00288 GHMP kinases N terminal domain KM398_00260 PF08544 GHMP kinases C terminal KM398_00265 PF09182 Bacterial purine repressor, N-terminal KM398_00265 PF00156 Phosphoribosyl transferase domain KM398_00270 PF01042 Endoribonuclease L-PSP KM398_00275 PF04026 SpoVG KM398_00280 PF00132 Bacterial transferase hexapeptide (six repeats) KM398_00280 PF00483 Nucleotidyl transferase KM398_00285 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KM398_00285 PF14572 Phosphoribosyl synthetase-associated domain KM398_00290 PF01195 Peptidyl-tRNA hydrolase KM398_00300 PF02559 CarD-like/TRCF domain KM398_00300 PF00270 DEAD/DEAH box helicase KM398_00300 PF03461 TRCF domain KM398_00300 PF17757 UvrB interaction domain KM398_00300 PF00271 Helicase conserved C-terminal domain KM398_00305 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KM398_00305 PF15714 Stage V sporulation protein T C-terminal, transcription factor KM398_00310 PF01943 Polysaccharide biosynthesis protein KM398_00310 PF14667 Polysaccharide biosynthesis C-terminal domain KM398_00315 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM398_00315 PF03819 MazG nucleotide pyrophosphohydrolase domain KM398_00320 PF01479 S4 domain KM398_00325 PF07873 YabP family KM398_00330 PF09578 Spore cortex protein YabQ (Spore_YabQ) KM398_00340 PF00575 S1 RNA binding domain KM398_00355 PF07228 Stage II sporulation protein E (SpoIIE) KM398_00360 PF01171 PP-loop family KM398_00360 PF09179 TilS substrate binding domain KM398_00360 PF11734 TilS substrate C-terminal domain KM398_00365 PF00156 Phosphoribosyl transferase domain KM398_00370 PF06480 FtsH Extracellular KM398_00370 PF01434 Peptidase family M41 KM398_00370 PF17862 AAA+ lid domain KM398_00370 PF00004 ATPase family associated with various cellular activities (AAA) KM398_00375 PF03309 Type III pantothenate kinase KM398_00380 PF01430 Hsp33 protein KM398_00385 PF00291 Pyridoxal-phosphate dependent enzyme KM398_00390 PF04715 Anthranilate synthase component I, N terminal region KM398_00390 PF00425 chorismate binding enzyme KM398_00395 PF00117 Glutamine amidotransferase class-I KM398_00400 PF01063 Amino-transferase class IV KM398_00405 PF00809 Pterin binding enzyme KM398_00410 PF02152 Dihydroneopterin aldolase KM398_00415 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KM398_00420 PF01381 Helix-turn-helix KM398_00425 PF01207 Dihydrouridine synthase (Dus) KM398_00430 PF01336 OB-fold nucleic acid binding domain KM398_00430 PF00152 tRNA synthetases class II (D, K and N) KM398_00450 PF17727 CtsR C-terminal dimerization domain KM398_00450 PF05848 CtsR N-terminal HTH domain KM398_00455 PF02151 UvrB/uvrC motif KM398_00460 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain KM398_00465 PF00004 ATPase family associated with various cellular activities (AAA) KM398_00465 PF07724 AAA domain (Cdc48 subfamily) KM398_00465 PF17871 AAA lid domain KM398_00465 PF02861 Clp amino terminal domain, pathogenicity island component KM398_00465 PF10431 C-terminal, D2-small domain, of ClpB protein KM398_00470 PF18073 Rubredoxin metal binding domain KM398_00475 PF10635 DisA bacterial checkpoint controller linker region KM398_00475 PF02457 DisA bacterial checkpoint controller nucleotide-binding KM398_00485 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KM398_00490 PF02542 YgbB family KM398_00495 PF00749 tRNA synthetases class I (E and Q), catalytic domain KM398_00500 PF00132 Bacterial transferase hexapeptide (six repeats) KM398_00500 PF06426 Serine acetyltransferase, N-terminal KM398_00505 PF01406 tRNA synthetases class I (C) catalytic domain KM398_00505 PF09190 DALR domain KM398_00510 PF00636 Ribonuclease III domain KM398_00515 PF08032 RNA 2'-O ribose methyltransferase substrate binding KM398_00515 PF00588 SpoU rRNA Methylase family KM398_00520 PF05991 YacP-like NYN domain KM398_00525 PF04542 Sigma-70 region 2 KM398_00525 PF08281 Sigma-70, region 4 KM398_00530 PF00471 Ribosomal protein L33 KM398_00535 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KM398_00540 PF02357 Transcription termination factor nusG KM398_00540 PF00467 KOW motif KM398_00545 PF03946 Ribosomal protein L11, N-terminal domain KM398_00545 PF00298 Ribosomal protein L11, RNA binding domain KM398_00550 PF00687 Ribosomal protein L1p/L10e family KM398_00555 PF00466 Ribosomal protein L10 KM398_00560 PF00542 Ribosomal protein L7/L12 C-terminal domain KM398_00560 PF16320 Ribosomal protein L7/L12 dimerisation domain KM398_00565 PF05175 Methyltransferase small domain KM398_00570 PF04565 RNA polymerase Rpb2, domain 3 KM398_00570 PF04560 RNA polymerase Rpb2, domain 7 KM398_00570 PF04563 RNA polymerase beta subunit KM398_00570 PF04561 RNA polymerase Rpb2, domain 2 KM398_00570 PF00562 RNA polymerase Rpb2, domain 6 KM398_00570 PF10385 RNA polymerase beta subunit external 1 domain KM398_00575 PF04998 RNA polymerase Rpb1, domain 5 KM398_00575 PF05000 RNA polymerase Rpb1, domain 4 KM398_00575 PF04983 RNA polymerase Rpb1, domain 3 KM398_00575 PF00623 RNA polymerase Rpb1, domain 2 KM398_00575 PF04997 RNA polymerase Rpb1, domain 1 KM398_00580 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family KM398_00585 PF00164 Ribosomal protein S12/S23 KM398_00590 PF00177 Ribosomal protein S7p/S5e KM398_00595 PF00679 Elongation factor G C-terminus KM398_00595 PF03144 Elongation factor Tu domain 2 KM398_00595 PF14492 Elongation Factor G, domain II KM398_00595 PF00009 Elongation factor Tu GTP binding domain KM398_00595 PF03764 Elongation factor G, domain IV KM398_00600 PF03143 Elongation factor Tu C-terminal domain KM398_00600 PF03144 Elongation factor Tu domain 2 KM398_00600 PF00009 Elongation factor Tu GTP binding domain KM398_00605 PF00338 Ribosomal protein S10p/S20e KM398_00610 PF00297 Ribosomal protein L3 KM398_00615 PF00573 Ribosomal protein L4/L1 family KM398_00620 PF00276 Ribosomal protein L23 KM398_00625 PF03947 Ribosomal Proteins L2, C-terminal domain KM398_00625 PF00181 Ribosomal Proteins L2, RNA binding domain KM398_00630 PF00203 Ribosomal protein S19 KM398_00635 PF00237 Ribosomal protein L22p/L17e KM398_00640 PF00189 Ribosomal protein S3, C-terminal domain KM398_00640 PF07650 KH domain KM398_00645 PF00252 Ribosomal protein L16p/L10e KM398_00650 PF00831 Ribosomal L29 protein KM398_00655 PF00366 Ribosomal protein S17 KM398_00660 PF00238 Ribosomal protein L14p/L23e KM398_00665 PF00467 KOW motif KM398_00665 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KM398_00670 PF00281 Ribosomal protein L5 KM398_00670 PF00673 ribosomal L5P family C-terminus KM398_00675 PF00253 Ribosomal protein S14p/S29e KM398_00680 PF00410 Ribosomal protein S8 KM398_00685 PF00347 Ribosomal protein L6 KM398_00690 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KM398_00695 PF03719 Ribosomal protein S5, C-terminal domain KM398_00695 PF00333 Ribosomal protein S5, N-terminal domain KM398_00700 PF00327 Ribosomal protein L30p/L7e KM398_00705 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KM398_00710 PF00344 SecY translocase KM398_00715 PF05191 Adenylate kinase, active site lid KM398_00720 PF00557 Metallopeptidase family M24 KM398_00725 PF01176 Translation initiation factor 1A / IF-1 KM398_00730 PF00444 Ribosomal protein L36 KM398_00735 PF00416 Ribosomal protein S13/S18 KM398_00740 PF00411 Ribosomal protein S11 KM398_00745 PF01000 RNA polymerase Rpb3/RpoA insert domain KM398_00745 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KM398_00745 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KM398_00750 PF01196 Ribosomal protein L17 KM398_00755 PF00005 ABC transporter KM398_00760 PF00005 ABC transporter KM398_00765 PF02361 Cobalt transport protein KM398_00770 PF01416 tRNA pseudouridine synthase KM398_00775 PF00572 Ribosomal protein L13 KM398_00780 PF00380 Ribosomal protein S9/S16 KM398_00790 PF01520 N-acetylmuramoyl-L-alanine amidase KM398_00795 PF10609 NUBPL iron-transfer P-loop NTPase KM398_00800 PF17898 Spore germination GerD central core domain KM398_00805 PF14089 KinB-signalling pathway activation in sporulation KM398_00810 PF01522 Polysaccharide deacetylase KM398_00885 PF00491 Arginase family KM398_00890 PF02457 DisA bacterial checkpoint controller nucleotide-binding KM398_00895 PF07949 YbbR-like protein KM398_00900 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KM398_00900 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KM398_00900 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KM398_00900 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KM398_00910 PF01380 SIS domain KM398_00915 PF00561 alpha/beta hydrolase fold KM398_00920 PF00392 Bacterial regulatory proteins, gntR family KM398_00920 PF07729 FCD domain KM398_00930 PF02447 GntP family permease KM398_00935 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM398_00935 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain KM398_00940 PF00326 Prolyl oligopeptidase family KM398_00940 PF07676 WD40-like Beta Propeller Repeat KM398_00975 PF00528 Binding-protein-dependent transport system inner membrane component KM398_00980 PF00005 ABC transporter KM398_00980 PF09383 NIL domain KM398_00985 PF03180 NLPA lipoprotein KM398_00990 PF00107 Zinc-binding dehydrogenase KM398_00990 PF08240 Alcohol dehydrogenase GroES-like domain KM398_01000 PF01565 FAD binding domain KM398_01005 PF07690 Major Facilitator Superfamily KM398_01015 PF07690 Major Facilitator Superfamily KM398_01030 PF00528 Binding-protein-dependent transport system inner membrane component KM398_01035 PF12911 N-terminal TM domain of oligopeptide transport permease C KM398_01035 PF00528 Binding-protein-dependent transport system inner membrane component KM398_01040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM398_01040 PF00005 ABC transporter KM398_01045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM398_01045 PF00005 ABC transporter KM398_01050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM398_01060 PF12833 Helix-turn-helix domain KM398_01080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM398_01085 PF00248 Aldo/keto reductase family KM398_01090 PF03807 NADP oxidoreductase coenzyme F420-dependent KM398_01090 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM398_01095 PF04973 Nicotinamide mononucleotide transporter KM398_01100 PF06800 Sugar transport protein KM398_01105 PF00528 Binding-protein-dependent transport system inner membrane component KM398_01115 PF12727 PBP superfamily domain KM398_01115 PF12728 Helix-turn-helix domain KM398_01125 PF03466 LysR substrate binding domain KM398_01125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM398_01130 PF00892 EamA-like transporter family KM398_01135 PF14142 YrzO-like protein KM398_01145 PF01553 Acyltransferase KM398_01155 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KM398_01155 PF00356 Bacterial regulatory proteins, lacI family KM398_01165 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM398_01165 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM398_01175 PF01026 TatD related DNase KM398_01180 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) KM398_01205 PF12848 ABC transporter KM398_01205 PF16326 ABC transporter C-terminal domain KM398_01205 PF00005 ABC transporter KM398_01220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM398_01225 PF00528 Binding-protein-dependent transport system inner membrane component KM398_01230 PF12911 N-terminal TM domain of oligopeptide transport permease C KM398_01230 PF00528 Binding-protein-dependent transport system inner membrane component KM398_01235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM398_01235 PF00005 ABC transporter KM398_01240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM398_01240 PF00005 ABC transporter KM398_01275 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM398_01280 PF01557 Fumarylacetoacetate (FAA) hydrolase family KM398_01290 PF07690 Major Facilitator Superfamily KM398_01300 PF01225 Mur ligase family, catalytic domain KM398_01300 PF02875 Mur ligase family, glutamate ligase domain KM398_01300 PF08245 Mur ligase middle domain KM398_01305 PF00270 DEAD/DEAH box helicase KM398_01305 PF00271 Helicase conserved C-terminal domain KM398_01310 PF03851 UV-endonuclease UvdE KM398_01315 PF01694 Rhomboid family KM398_01320 PF01648 4'-phosphopantetheinyl transferase superfamily KM398_01330 PF00842 Alanine racemase, C-terminal domain KM398_01330 PF01168 Alanine racemase, N-terminal domain KM398_01335 PF01402 Ribbon-helix-helix protein, copG family KM398_01340 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system KM398_01345 PF17674 HHH domain KM398_01345 PF00575 S1 RNA binding domain KM398_01345 PF09371 Tex-like protein N-terminal domain KM398_01345 PF16921 Tex protein YqgF-like domain KM398_01355 PF10263 SprT-like family KM398_01355 PF17283 SprT-like zinc ribbon domain KM398_01440 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KM398_01445 PF00814 Glycoprotease family KM398_01450 PF00583 Acetyltransferase (GNAT) family KM398_01455 PF00814 Glycoprotease family KM398_01460 PF12848 ABC transporter KM398_01460 PF00005 ABC transporter KM398_01460 PF16326 ABC transporter C-terminal domain KM398_01465 PF02629 CoA binding domain KM398_01465 PF06971 Putative DNA-binding protein N-terminus KM398_01475 PF02517 CPBP intramembrane metalloprotease KM398_01480 PF00166 Chaperonin 10 Kd subunit KM398_01485 PF00118 TCP-1/cpn60 chaperonin family KM398_01490 PF02540 NAD synthase KM398_01490 PF00958 GMP synthase C terminal domain KM398_01490 PF00117 Glutamine amidotransferase class-I KM398_01495 PF00860 Permease family KM398_01500 PF00072 Response regulator receiver domain KM398_01500 PF00486 Transcriptional regulatory protein, C terminal KM398_01505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_01505 PF00512 His Kinase A (phospho-acceptor) domain KM398_01505 PF00989 PAS fold KM398_01505 PF16736 Single Cache-like KM398_01535 PF08241 Methyltransferase domain KM398_01575 PF02673 Bacitracin resistance protein BacA KM398_01585 PF00005 ABC transporter KM398_01590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_01590 PF00512 His Kinase A (phospho-acceptor) domain KM398_01595 PF00072 Response regulator receiver domain KM398_01595 PF00486 Transcriptional regulatory protein, C terminal KM398_01615 PF00731 AIR carboxylase KM398_01620 PF02222 ATP-grasp domain KM398_01620 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KM398_01625 PF00206 Lyase KM398_01625 PF10397 Adenylosuccinate lyase C-terminus KM398_01630 PF01259 SAICAR synthetase KM398_01635 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase KM398_01645 PF00586 AIR synthase related protein, N-terminal domain KM398_01645 PF02769 AIR synthase related protein, C-terminal domain KM398_01645 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KM398_01650 PF00156 Phosphoribosyl transferase domain KM398_01655 PF00586 AIR synthase related protein, N-terminal domain KM398_01655 PF02769 AIR synthase related protein, C-terminal domain KM398_01660 PF00551 Formyl transferase KM398_01665 PF02142 MGS-like domain KM398_01665 PF01808 AICARFT/IMPCHase bienzyme KM398_01670 PF02844 Phosphoribosylglycinamide synthetase, N domain KM398_01670 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KM398_01670 PF02843 Phosphoribosylglycinamide synthetase, C domain KM398_01690 PF01884 PcrB family KM398_01695 PF00580 UvrD/REP helicase N-terminal domain KM398_01695 PF13361 UvrD-like helicase C-terminal domain KM398_01700 PF12826 Helix-hairpin-helix motif KM398_01700 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KM398_01700 PF00533 BRCA1 C Terminus (BRCT) domain KM398_01700 PF01653 NAD-dependent DNA ligase adenylation domain KM398_01700 PF03120 NAD-dependent DNA ligase OB-fold domain KM398_01705 PF07537 CamS sex pheromone cAM373 precursor KM398_01710 PF01925 Sulfite exporter TauE/SafE KM398_01715 PF00171 Aldehyde dehydrogenase family KM398_01725 PF00857 Isochorismatase family KM398_01730 PF00005 ABC transporter KM398_01730 PF09383 NIL domain KM398_01735 PF00528 Binding-protein-dependent transport system inner membrane component KM398_01740 PF03180 NLPA lipoprotein KM398_01760 PF01047 MarR family KM398_01770 PF02686 Glu-tRNAGln amidotransferase C subunit KM398_01775 PF01425 Amidase KM398_01780 PF02637 GatB domain KM398_01780 PF02934 GatB/GatE catalytic domain KM398_01785 PF00781 Diacylglycerol kinase catalytic domain KM398_01790 PF13419 Haloacid dehalogenase-like hydrolase KM398_01795 PF00202 Aminotransferase class-III KM398_01800 PF00158 Sigma-54 interaction domain KM398_01805 PF00171 Aldehyde dehydrogenase family KM398_01810 PF00893 Small Multidrug Resistance protein KM398_01815 PF02073 Thermophilic metalloprotease (M29) KM398_01830 PF07662 Na+ dependent nucleoside transporter C-terminus KM398_01830 PF01773 Na+ dependent nucleoside transporter N-terminus KM398_01830 PF07670 Nucleoside recognition KM398_01835 PF05958 tRNA (Uracil-5-)-methyltransferase KM398_01835 PF01938 TRAM domain KM398_01835 PF02475 Met-10+ like-protein KM398_01840 PF01207 Dihydrouridine synthase (Dus) KM398_01850 PF07308 Protein of unknown function (DUF1456) KM398_01865 PF13378 Enolase C-terminal domain-like KM398_01865 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KM398_01875 PF03553 Na+/H+ antiporter family KM398_01880 PF01546 Peptidase family M20/M25/M40 KM398_01880 PF07687 Peptidase dimerisation domain KM398_01890 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM398_01890 PF13192 Thioredoxin domain KM398_01895 PF00578 AhpC/TSA family KM398_01900 PF01636 Phosphotransferase enzyme family KM398_01905 PF01008 Initiation factor 2 subunit family KM398_01910 PF00596 Class II Aldolase and Adducin N-terminal domain KM398_01915 PF01032 FecCD transport family KM398_01920 PF01032 FecCD transport family KM398_01925 PF01497 Periplasmic binding protein KM398_01930 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM398_01940 PF12728 Helix-turn-helix domain KM398_01975 PF13188 PAS domain KM398_01975 PF00989 PAS fold KM398_01975 PF00512 His Kinase A (phospho-acceptor) domain KM398_01975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_01975 PF13426 PAS domain KM398_01995 PF10127 RNA repair pathway DNA polymerase beta family KM398_02000 PF07690 Major Facilitator Superfamily KM398_02005 PF01266 FAD dependent oxidoreductase KM398_02005 PF00355 Rieske [2Fe-2S] domain KM398_02015 PF00528 Binding-protein-dependent transport system inner membrane component KM398_02020 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM398_02025 PF00005 ABC transporter KM398_02030 PF12729 Four helix bundle sensory module for signal transduction KM398_02030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM398_02030 PF00672 HAMP domain KM398_02035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM398_02035 PF00672 HAMP domain KM398_02035 PF12729 Four helix bundle sensory module for signal transduction KM398_02040 PF16657 Maltogenic Amylase, C-terminal domain KM398_02040 PF00128 Alpha amylase, catalytic domain KM398_02045 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KM398_02045 PF00367 phosphotransferase system, EIIB KM398_02045 PF02378 Phosphotransferase system, EIIC KM398_02050 PF03372 Endonuclease/Exonuclease/phosphatase family KM398_02055 PF01061 ABC-2 type transporter KM398_02060 PF01131 DNA topoisomerase KM398_02060 PF01751 Toprim domain KM398_02065 PF02110 Hydroxyethylthiazole kinase family KM398_02070 PF02581 Thiamine monophosphate synthase KM398_02075 PF03605 Anaerobic c4-dicarboxylate membrane transporter KM398_02080 PF00672 HAMP domain KM398_02080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM398_02085 PF01910 Thiamine-binding protein KM398_02090 PF00528 Binding-protein-dependent transport system inner membrane component KM398_02100 PF00005 ABC transporter KM398_02105 PF12848 ABC transporter KM398_02105 PF00005 ABC transporter KM398_02110 PF00704 Glycosyl hydrolases family 18 KM398_02110 PF00041 Fibronectin type III domain KM398_02130 PF00440 Bacterial regulatory proteins, tetR family KM398_02130 PF08360 QacR-like protein, C-terminal region KM398_02150 PF11700 Vacuole effluxer Atg22 like KM398_02165 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM398_02165 PF09180 Prolyl-tRNA synthetase, C-terminal KM398_02165 PF03129 Anticodon binding domain KM398_02175 PF00480 ROK family KM398_02180 PF02342 TerD domain KM398_02185 PF02342 TerD domain KM398_02190 PF02342 TerD domain KM398_02195 PF03741 Integral membrane protein TerC family KM398_02200 PF14266 Putative component of 'biosynthetic module' KM398_02205 PF05816 Toxic anion resistance protein (TelA) KM398_02210 PF00689 Cation transporting ATPase, C-terminus KM398_02210 PF00690 Cation transporter/ATPase, N-terminus KM398_02215 PF06569 Protein of unknown function (DUF1128) KM398_02220 PF01451 Low molecular weight phosphotyrosine protein phosphatase KM398_02230 PF03631 Virulence factor BrkB KM398_02240 PF00892 EamA-like transporter family KM398_02260 PF09335 SNARE associated Golgi protein KM398_02275 PF16242 Pyridoxamine 5'-phosphate oxidase like KM398_02280 PF01699 Sodium/calcium exchanger protein KM398_02285 PF14167 YfkD-like protein KM398_02290 PF08756 YfkB-like domain KM398_02290 PF04055 Radical SAM superfamily KM398_02300 PF05683 Fumarase C-terminus KM398_02300 PF05681 Fumarate hydratase (Fumerase) KM398_02305 PF01522 Polysaccharide deacetylase KM398_02315 PF00730 HhH-GPD superfamily base excision DNA repair protein KM398_02320 PF01938 TRAM domain KM398_02320 PF05958 tRNA (Uracil-5-)-methyltransferase KM398_02325 PF14659 Phage integrase, N-terminal SAM-like domain KM398_02325 PF00589 Phage integrase family KM398_02335 PF01381 Helix-turn-helix KM398_02350 PF01381 Helix-turn-helix KM398_02380 PF07319 Primosomal protein DnaI N-terminus KM398_02380 PF01695 IstB-like ATP binding protein KM398_02600 PF01183 Glycosyl hydrolases family 25 KM398_02610 PF01416 tRNA pseudouridine synthase KM398_02620 PF02954 Bacterial regulatory protein, Fis family KM398_02620 PF00158 Sigma-54 interaction domain KM398_02620 PF13426 PAS domain KM398_02630 PF00324 Amino acid permease KM398_02635 PF01546 Peptidase family M20/M25/M40 KM398_02635 PF07687 Peptidase dimerisation domain KM398_02660 PF04960 Glutaminase KM398_02665 PF02378 Phosphotransferase system, EIIC KM398_02665 PF00367 phosphotransferase system, EIIB KM398_02670 PF00144 Beta-lactamase KM398_02685 PF00535 Glycosyl transferase family 2 KM398_02690 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM398_02690 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM398_02690 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM398_02695 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM398_02695 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM398_02695 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM398_02700 PF01370 NAD dependent epimerase/dehydratase family KM398_02700 PF02911 Formyl transferase, C-terminal domain KM398_02700 PF00551 Formyl transferase KM398_02705 PF00535 Glycosyl transferase family 2 KM398_02715 PF02901 Pyruvate formate lyase-like KM398_02715 PF01228 Glycine radical KM398_02720 PF04055 Radical SAM superfamily KM398_02725 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase KM398_02725 PF04101 Glycosyltransferase family 28 C-terminal domain KM398_02740 PF01979 Amidohydrolase family KM398_02745 PF01370 NAD dependent epimerase/dehydratase family KM398_02745 PF08338 Domain of unknown function (DUF1731) KM398_02750 PF02631 RecX family KM398_02765 PF08176 Small acid-soluble spore protein K family KM398_02770 PF14043 WVELL protein KM398_02775 PF04307 LexA-binding, inner membrane-associated putative hydrolase KM398_02780 PF14815 NUDIX domain KM398_02780 PF00730 HhH-GPD superfamily base excision DNA repair protein KM398_02790 PF04259 Small, acid-soluble spore protein, gamma-type KM398_02795 PF14182 YgaB-like protein KM398_02800 PF04167 Protein of unknown function (DUF402) KM398_02805 PF00005 ABC transporter KM398_02805 PF00664 ABC transporter transmembrane region KM398_02810 PF06081 Aromatic acid exporter family member 1 KM398_02815 PF01645 Conserved region in glutamate synthase KM398_02815 PF04898 Glutamate synthase central domain KM398_02815 PF00310 Glutamine amidotransferases class-II KM398_02815 PF01493 GXGXG motif KM398_02820 PF00202 Aminotransferase class-III KM398_02825 PF00005 ABC transporter KM398_02840 PF07885 Ion channel KM398_02845 PF00578 AhpC/TSA family KM398_02850 PF01475 Ferric uptake regulator family KM398_02855 PF11023 Zinc-ribbon containing domain KM398_02955 PF01709 Transcriptional regulator KM398_02960 PF13344 Haloacid dehalogenase-like hydrolase KM398_02960 PF00293 NUDIX domain KM398_02965 PF00912 Transglycosylase KM398_02965 PF00905 Penicillin binding protein transpeptidase domain KM398_02970 PF13462 Thioredoxin KM398_02980 PF08331 Domain of unknown function (DUF1730) KM398_02985 PF12671 Putative amidase domain KM398_02990 PF00588 SpoU rRNA Methylase family KM398_02995 PF03707 Bacterial signalling protein N terminal repeat KM398_02995 PF00990 Diguanylate cyclase, GGDEF domain KM398_02995 PF00563 EAL domain KM398_03000 PF06798 PrkA serine protein kinase C-terminal domain KM398_03000 PF08298 PrkA AAA domain KM398_03005 PF04285 Protein of unknown function (DUF444) KM398_03020 PF02028 BCCT, betaine/carnitine/choline family transporter KM398_03025 PF08453 Peptidase family M9 N-terminal KM398_03025 PF01752 Collagenase KM398_03025 PF18496 Collagenase G catalytic helper subdomain KM398_03035 PF01145 SPFH domain / Band 7 family KM398_03035 PF15975 Flotillin KM398_03040 PF02743 Cache domain KM398_03040 PF00672 HAMP domain KM398_03040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM398_03045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_03045 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KM398_03045 PF17203 Single cache domain 3 KM398_03045 PF00989 PAS fold KM398_03050 PF00072 Response regulator receiver domain KM398_03050 PF08279 HTH domain KM398_03050 PF12431 Transcriptional regulator KM398_03055 PF03600 Citrate transporter KM398_03075 PF04309 Glycerol-3-phosphate responsive antiterminator KM398_03080 PF00005 ABC transporter KM398_03080 PF17912 MalK OB fold domain KM398_03085 PF00528 Binding-protein-dependent transport system inner membrane component KM398_03090 PF00528 Binding-protein-dependent transport system inner membrane component KM398_03095 PF13416 Bacterial extracellular solute-binding protein KM398_03100 PF00149 Calcineurin-like phosphoesterase KM398_03105 PF00072 Response regulator receiver domain KM398_03105 PF00486 Transcriptional regulatory protein, C terminal KM398_03110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_03110 PF00512 His Kinase A (phospho-acceptor) domain KM398_03120 PF13529 Peptidase_C39 like family KM398_03125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM398_03125 PF00672 HAMP domain KM398_03125 PF02743 Cache domain KM398_03130 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KM398_03130 PF17203 Single cache domain 3 KM398_03130 PF00989 PAS fold KM398_03130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_03135 PF00072 Response regulator receiver domain KM398_03140 PF03390 2-hydroxycarboxylate transporter family KM398_03145 PF03949 Malic enzyme, NAD binding domain KM398_03145 PF00390 Malic enzyme, N-terminal domain KM398_03155 PF00892 EamA-like transporter family KM398_03160 PF00392 Bacterial regulatory proteins, gntR family KM398_03160 PF00155 Aminotransferase class I and II KM398_03170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_03170 PF18698 Histidine kinase sensor domain KM398_03170 PF00512 His Kinase A (phospho-acceptor) domain KM398_03170 PF00989 PAS fold KM398_03170 PF00672 HAMP domain KM398_03175 PF00072 Response regulator receiver domain KM398_03175 PF00486 Transcriptional regulatory protein, C terminal KM398_03180 PF00583 Acetyltransferase (GNAT) family KM398_03180 PF13508 Acetyltransferase (GNAT) domain KM398_03185 PF02634 FdhD/NarQ family KM398_03190 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KM398_03190 PF00037 4Fe-4S binding domain KM398_03190 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KM398_03190 PF01568 Molydopterin dinucleotide binding domain KM398_03190 PF00384 Molybdopterin oxidoreductase KM398_03195 PF07849 Protein of unknown function (DUF1641) KM398_03205 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KM398_03205 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KM398_03210 PF13520 Amino acid permease KM398_03215 PF01022 Bacterial regulatory protein, arsR family KM398_03220 PF00403 Heavy-metal-associated domain KM398_03225 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KM398_03225 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain KM398_03225 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KM398_03240 PF03413 Peptidase propeptide and YPEB domain KM398_03240 PF07504 Fungalysin/Thermolysin Propeptide Motif KM398_03240 PF02868 Thermolysin metallopeptidase, alpha-helical domain KM398_03240 PF01447 Thermolysin metallopeptidase, catalytic domain KM398_03260 PF04294 VanW like protein KM398_03265 PF03816 Cell envelope-related transcriptional attenuator domain KM398_03270 PF07662 Na+ dependent nucleoside transporter C-terminus KM398_03270 PF01773 Na+ dependent nucleoside transporter N-terminus KM398_03275 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM398_03280 PF00571 CBS domain KM398_03280 PF03471 Transporter associated domain KM398_03280 PF01595 Cyclin M transmembrane N-terminal domain KM398_03285 PF10415 Fumarase C C-terminus KM398_03285 PF00206 Lyase KM398_03290 PF02652 L-lactate permease KM398_03295 PF01022 Bacterial regulatory protein, arsR family KM398_03300 PF08141 Small acid-soluble spore protein H family KM398_03305 PF00854 POT family KM398_03310 PF01497 Periplasmic binding protein KM398_03315 PF01032 FecCD transport family KM398_03320 PF01032 FecCD transport family KM398_03325 PF00005 ABC transporter KM398_03330 PF08241 Methyltransferase domain KM398_03335 PF00155 Aminotransferase class I and II KM398_03340 PF01370 NAD dependent epimerase/dehydratase family KM398_03345 PF13344 Haloacid dehalogenase-like hydrolase KM398_03345 PF00293 NUDIX domain KM398_03350 PF00092 von Willebrand factor type A domain KM398_03355 PF07728 AAA domain (dynein-related subfamily) KM398_03360 PF13091 PLD-like domain KM398_03360 PF13396 Phospholipase_D-nuclease N-terminal KM398_03375 PF03707 Bacterial signalling protein N terminal repeat KM398_03375 PF00563 EAL domain KM398_03375 PF00990 Diguanylate cyclase, GGDEF domain KM398_03380 PF13520 Amino acid permease KM398_03385 PF00392 Bacterial regulatory proteins, gntR family KM398_03385 PF07702 UTRA domain KM398_03390 PF00367 phosphotransferase system, EIIB KM398_03390 PF02378 Phosphotransferase system, EIIC KM398_03395 PF00128 Alpha amylase, catalytic domain KM398_03395 PF16657 Maltogenic Amylase, C-terminal domain KM398_03410 PF03323 Bacillus/Clostridium GerA spore germination protein KM398_03420 PF01636 Phosphotransferase enzyme family KM398_03425 PF01235 Sodium:alanine symporter family KM398_03430 PF00005 ABC transporter KM398_03435 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM398_03440 PF00528 Binding-protein-dependent transport system inner membrane component KM398_03445 PF00528 Binding-protein-dependent transport system inner membrane component KM398_03450 PF00324 Amino acid permease KM398_03475 PF08279 HTH domain KM398_03475 PF13280 WYL domain KM398_03480 PF01872 RibD C-terminal domain KM398_03485 PF00672 HAMP domain KM398_03485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_03485 PF18698 Histidine kinase sensor domain KM398_03485 PF00512 His Kinase A (phospho-acceptor) domain KM398_03485 PF00989 PAS fold KM398_03490 PF00072 Response regulator receiver domain KM398_03490 PF00486 Transcriptional regulatory protein, C terminal KM398_03500 PF00916 Sulfate permease family KM398_03500 PF01740 STAS domain KM398_03505 PF00582 Universal stress protein family KM398_03515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM398_03520 PF00528 Binding-protein-dependent transport system inner membrane component KM398_03525 PF00528 Binding-protein-dependent transport system inner membrane component KM398_03530 PF00005 ABC transporter KM398_03530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM398_03535 PF00005 ABC transporter KM398_03535 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM398_03540 PF07690 Major Facilitator Superfamily KM398_03545 PF01047 MarR family KM398_03555 PF00356 Bacterial regulatory proteins, lacI family KM398_03560 PF00294 pfkB family carbohydrate kinase KM398_03565 PF05025 RbsD / FucU transport protein family KM398_03570 PF00005 ABC transporter KM398_03575 PF02653 Branched-chain amino acid transport system / permease component KM398_03580 PF13407 Periplasmic binding protein domain KM398_03585 PF00923 Transaldolase/Fructose-6-phosphate aldolase KM398_03590 PF05547 Immune inhibitor A peptidase M6 KM398_03605 PF00107 Zinc-binding dehydrogenase KM398_03605 PF08240 Alcohol dehydrogenase GroES-like domain KM398_03615 PF00882 Zinc dependent phospholipase C KM398_03620 PF03372 Endonuclease/Exonuclease/phosphatase family KM398_03645 PF02673 Bacitracin resistance protein BacA KM398_03650 PF02743 Cache domain KM398_03650 PF00672 HAMP domain KM398_03650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM398_03655 PF01476 LysM domain KM398_03655 PF06725 3D domain KM398_03660 PF01381 Helix-turn-helix KM398_03670 PF04203 Sortase domain KM398_03675 PF00854 POT family KM398_03680 PF05525 Branched-chain amino acid transport protein KM398_03695 PF00324 Amino acid permease KM398_03700 PF00860 Permease family KM398_03725 PF00999 Sodium/hydrogen exchanger family KM398_03725 PF02254 TrkA-N domain KM398_03725 PF02080 TrkA-C domain KM398_03735 PF00510 Cytochrome c oxidase subunit III KM398_03740 PF00115 Cytochrome C and Quinol oxidase polypeptide I KM398_03745 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KM398_03750 PF00324 Amino acid permease KM398_03755 PF13529 Peptidase_C39 like family KM398_03760 PF07687 Peptidase dimerisation domain KM398_03760 PF01546 Peptidase family M20/M25/M40 KM398_03765 PF11755 Protein of unknown function (DUF3311) KM398_03770 PF00474 Sodium:solute symporter family KM398_03775 PF03323 Bacillus/Clostridium GerA spore germination protein KM398_03780 PF03845 Spore germination protein KM398_03785 PF05504 Spore germination B3/ GerAC like, C-terminal KM398_03790 PF07664 Ferrous iron transport protein B C terminus KM398_03790 PF17910 FeoB cytosolic helical domain KM398_03790 PF07670 Nucleoside recognition KM398_03790 PF02421 Ferrous iron transport protein B KM398_03795 PF17910 FeoB cytosolic helical domain KM398_03795 PF07670 Nucleoside recognition KM398_03795 PF07664 Ferrous iron transport protein B C terminus KM398_03795 PF02421 Ferrous iron transport protein B KM398_03800 PF07664 Ferrous iron transport protein B C terminus KM398_03800 PF17910 FeoB cytosolic helical domain KM398_03800 PF02421 Ferrous iron transport protein B KM398_03800 PF07670 Nucleoside recognition KM398_03800 PF04023 FeoA domain KM398_03805 PF12849 PBP superfamily domain KM398_03810 PF00528 Binding-protein-dependent transport system inner membrane component KM398_03815 PF00528 Binding-protein-dependent transport system inner membrane component KM398_03825 PF00873 AcrB/AcrD/AcrF family KM398_03945 PF00571 CBS domain KM398_03960 PF00246 Zinc carboxypeptidase KM398_03960 PF08239 Bacterial SH3 domain KM398_03965 PF03070 TENA/THI-4/PQQC family KM398_03970 PF00005 ABC transporter KM398_03975 PF00528 Binding-protein-dependent transport system inner membrane component KM398_03980 PF09084 NMT1/THI5 like KM398_03985 PF02581 Thiamine monophosphate synthase KM398_03990 PF01266 FAD dependent oxidoreductase KM398_03995 PF02597 ThiS family KM398_04000 PF05690 Thiazole biosynthesis protein ThiG KM398_04005 PF00899 ThiF family KM398_04010 PF08543 Phosphomethylpyrimidine kinase KM398_04035 PF03814 Potassium-transporting ATPase A subunit KM398_04045 PF02669 K+-transporting ATPase, c chain KM398_04050 PF02702 Osmosensitive K+ channel His kinase sensor domain KM398_04055 PF07690 Major Facilitator Superfamily KM398_04060 PF01047 MarR family KM398_04075 PF00860 Permease family KM398_04095 PF00294 pfkB family carbohydrate kinase KM398_04100 PF08244 Glycosyl hydrolases family 32 C terminal KM398_04100 PF00251 Glycosyl hydrolases family 32 N-terminal domain KM398_04105 PF00367 phosphotransferase system, EIIB KM398_04105 PF02378 Phosphotransferase system, EIIC KM398_04110 PF00356 Bacterial regulatory proteins, lacI family KM398_04110 PF13407 Periplasmic binding protein domain KM398_04120 PF00085 Thioredoxin KM398_04125 PF02600 Disulfide bond formation protein DsbB KM398_04130 PF14148 YhdB-like protein KM398_04150 PF03323 Bacillus/Clostridium GerA spore germination protein KM398_04160 PF00881 Nitroreductase family KM398_04165 PF04293 SpoVR like protein KM398_04190 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM398_04190 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM398_04195 PF02583 Metal-sensitive transcriptional repressor KM398_04200 PF00581 Rhodanese-like domain KM398_04200 PF01206 Sulfurtransferase TusA KM398_04205 PF00581 Rhodanese-like domain KM398_04205 PF00753 Metallo-beta-lactamase superfamily KM398_04210 PF01206 Sulfurtransferase TusA KM398_04215 PF00581 Rhodanese-like domain KM398_04225 PF13686 DsrE/DsrF/DrsH-like family KM398_04230 PF01925 Sulfite exporter TauE/SafE KM398_04240 PF03816 Cell envelope-related transcriptional attenuator domain KM398_04245 PF08240 Alcohol dehydrogenase GroES-like domain KM398_04245 PF00107 Zinc-binding dehydrogenase KM398_04250 PF02690 Na+/Pi-cotransporter KM398_04255 PF07690 Major Facilitator Superfamily KM398_04265 PF08279 HTH domain KM398_04265 PF05043 Mga helix-turn-helix domain KM398_04265 PF00874 PRD domain KM398_04265 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KM398_04270 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KM398_04275 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KM398_04280 PF02378 Phosphotransferase system, EIIC KM398_04295 PF01476 LysM domain KM398_04295 PF06725 3D domain KM398_04300 PF12704 MacB-like periplasmic core domain KM398_04300 PF02687 FtsX-like permease family KM398_04305 PF00005 ABC transporter KM398_04315 PF09529 Integral membrane protein (intg_mem_TP0381) KM398_04330 PF05525 Branched-chain amino acid transport protein KM398_04335 PF05067 Manganese containing catalase KM398_04340 PF12652 CotJB protein KM398_04345 PF11007 Spore coat associated protein JA (CotJA) KM398_04360 PF02735 Ku70/Ku80 beta-barrel domain KM398_04370 PF09335 SNARE associated Golgi protein KM398_04405 PF13520 Amino acid permease KM398_04410 PF00999 Sodium/hydrogen exchanger family KM398_04420 PF01380 SIS domain KM398_04420 PF01418 Helix-turn-helix domain, rpiR family KM398_04425 PF01380 SIS domain KM398_04430 PF00367 phosphotransferase system, EIIB KM398_04430 PF02378 Phosphotransferase system, EIIC KM398_04440 PF07681 DoxX KM398_04455 PF00892 EamA-like transporter family KM398_04460 PF01037 Lrp/AsnC ligand binding domain KM398_04470 PF00893 Small Multidrug Resistance protein KM398_04475 PF00893 Small Multidrug Resistance protein KM398_04480 PF17934 Tetracyclin repressor-like, C-terminal domain KM398_04480 PF00440 Bacterial regulatory proteins, tetR family KM398_04485 PF07690 Major Facilitator Superfamily KM398_04490 PF01638 HxlR-like helix-turn-helix KM398_04500 PF02525 Flavodoxin-like fold KM398_04505 PF12793 Sugar transport-related sRNA regulator N-term KM398_04505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM398_04510 PF07690 Major Facilitator Superfamily KM398_04520 PF01965 DJ-1/PfpI family KM398_04525 PF00199 Catalase KM398_04525 PF18011 C-terminal domain found in long catalases KM398_04525 PF06628 Catalase-related immune-responsive KM398_04535 PF13520 Amino acid permease KM398_04540 PF01177 Asp/Glu/Hydantoin racemase KM398_04550 PF00171 Aldehyde dehydrogenase family KM398_04555 PF00664 ABC transporter transmembrane region KM398_04555 PF00005 ABC transporter KM398_04565 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM398_04570 PF00528 Binding-protein-dependent transport system inner membrane component KM398_04575 PF00005 ABC transporter KM398_04580 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM398_04590 PF14398 YheC/D like ATP-grasp KM398_04600 PF04286 Protein of unknown function (DUF445) KM398_04605 PF06133 Control of competence regulator ComK, YlbF/YmcA KM398_04620 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM398_04620 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM398_04620 PF00205 Thiamine pyrophosphate enzyme, central domain KM398_04625 PF03306 Alpha-acetolactate decarboxylase KM398_04635 PF02245 Methylpurine-DNA glycosylase (MPG) KM398_04655 PF04055 Radical SAM superfamily KM398_04660 PF00501 AMP-binding enzyme KM398_04660 PF13193 AMP-binding enzyme C-terminal domain KM398_04670 PF01740 STAS domain KM398_04670 PF00916 Sulfate permease family KM398_04690 PF07516 SecA Wing and Scaffold domain KM398_04690 PF07517 SecA DEAD-like domain KM398_04690 PF01043 SecA preprotein cross-linking domain KM398_04695 PF14667 Polysaccharide biosynthesis C-terminal domain KM398_04695 PF01943 Polysaccharide biosynthesis protein KM398_04705 PF02368 Bacterial Ig-like domain (group 2) KM398_04705 PF00395 S-layer homology domain KM398_04705 PF13205 Bacterial Ig-like domain KM398_04710 PF00395 S-layer homology domain KM398_04720 PF03062 MBOAT, membrane-bound O-acyltransferase family KM398_04725 PF03062 MBOAT, membrane-bound O-acyltransferase family KM398_04740 PF00378 Enoyl-CoA hydratase/isomerase KM398_04760 PF05343 M42 glutamyl aminopeptidase KM398_04765 PF01520 N-acetylmuramoyl-L-alanine amidase KM398_04765 PF00395 S-layer homology domain KM398_04780 PF05544 Proline racemase KM398_04785 PF02423 Ornithine cyclodeaminase/mu-crystallin family KM398_04815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM398_04820 PF00528 Binding-protein-dependent transport system inner membrane component KM398_04825 PF12911 N-terminal TM domain of oligopeptide transport permease C KM398_04825 PF00528 Binding-protein-dependent transport system inner membrane component KM398_04835 PF00005 ABC transporter KM398_04835 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM398_04840 PF01541 GIY-YIG catalytic domain KM398_04870 PF00083 Sugar (and other) transporter KM398_04875 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KM398_04875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_04880 PF08279 HTH domain KM398_04880 PF12431 Transcriptional regulator KM398_04880 PF00072 Response regulator receiver domain KM398_04885 PF03401 Tripartite tricarboxylate transporter family receptor KM398_04890 PF02342 TerD domain KM398_04915 PF13411 MerR HTH family regulatory protein KM398_04915 PF06445 GyrI-like small molecule binding domain KM398_04930 PF03796 DnaB-like helicase C terminal domain KM398_04930 PF00772 DnaB-like helicase N terminal domain KM398_04955 PF01925 Sulfite exporter TauE/SafE KM398_04970 PF07690 Major Facilitator Superfamily KM398_05015 PF07993 Male sterility protein KM398_05015 PF00550 Phosphopantetheine attachment site KM398_05020 PF18665 Tetracyclin repressor-like, C-terminal domain KM398_05020 PF00440 Bacterial regulatory proteins, tetR family KM398_05040 PF01066 CDP-alcohol phosphatidyltransferase KM398_05060 PF02733 Dak1 domain KM398_05070 PF02733 Dak1 domain KM398_05075 PF02525 Flavodoxin-like fold KM398_05080 PF02082 Transcriptional regulator KM398_05110 PF01966 HD domain KM398_05110 PF00672 HAMP domain KM398_05130 PF00395 S-layer homology domain KM398_05155 PF11181 Heat induced stress protein YflT KM398_05160 PF05532 CsbD-like KM398_05175 PF01740 STAS domain KM398_05180 PF13581 Histidine kinase-like ATPase domain KM398_05185 PF04539 Sigma-70 region 3 KM398_05185 PF04545 Sigma-70, region 4 KM398_05185 PF04542 Sigma-70 region 2 KM398_05195 PF13426 PAS domain KM398_05195 PF07228 Stage II sporulation protein E (SpoIIE) KM398_05200 PF03705 CheR methyltransferase, all-alpha domain KM398_05200 PF01739 CheR methyltransferase, SAM binding domain KM398_05205 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM398_05205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_05205 PF00512 His Kinase A (phospho-acceptor) domain KM398_05205 PF00072 Response regulator receiver domain KM398_05205 PF01627 Hpt domain KM398_05230 PF01906 Putative heavy-metal-binding KM398_05240 PF08240 Alcohol dehydrogenase GroES-like domain KM398_05240 PF00107 Zinc-binding dehydrogenase KM398_05245 PF11121 Protein of unknown function (DUF2639) KM398_05260 PF00149 Calcineurin-like phosphoesterase KM398_05265 PF13514 AAA domain KM398_05270 PF12323 Helix-turn-helix domain KM398_05270 PF07282 Putative transposase DNA-binding domain KM398_05270 PF01385 Probable transposase KM398_05280 PF01966 HD domain KM398_05280 PF01336 OB-fold nucleic acid binding domain KM398_05285 PF00440 Bacterial regulatory proteins, tetR family KM398_05290 PF07690 Major Facilitator Superfamily KM398_05295 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM398_05305 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM398_05310 PF18801 response regulator aspartate phosphatase H, N terminal KM398_05315 PF08386 TAP-like protein KM398_05315 PF00561 alpha/beta hydrolase fold KM398_05335 PF04309 Glycerol-3-phosphate responsive antiterminator KM398_05340 PF00230 Major intrinsic protein KM398_05345 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM398_05345 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM398_05350 PF01266 FAD dependent oxidoreductase KM398_05350 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KM398_05365 PF08281 Sigma-70, region 4 KM398_05365 PF04542 Sigma-70 region 2 KM398_05390 PF07690 Major Facilitator Superfamily KM398_05395 PF07690 Major Facilitator Superfamily KM398_05405 PF13538 UvrD-like helicase C-terminal domain KM398_05425 PF01047 MarR family KM398_05430 PF12732 YtxH-like protein KM398_05435 PF01230 HIT domain KM398_05440 PF00005 ABC transporter KM398_05445 PF05975 Bacterial ABC transporter protein EcsB KM398_05450 PF12787 EcsC protein family KM398_05460 PF00440 Bacterial regulatory proteins, tetR family KM398_05460 PF17934 Tetracyclin repressor-like, C-terminal domain KM398_05470 PF03703 Bacterial PH domain KM398_05520 PF03703 Bacterial PH domain KM398_05525 PF03703 Bacterial PH domain KM398_05530 PF03992 Antibiotic biosynthesis monooxygenase KM398_05535 PF00905 Penicillin binding protein transpeptidase domain KM398_05535 PF00912 Transglycosylase KM398_05540 PF01208 Uroporphyrinogen decarboxylase (URO-D) KM398_05545 PF00762 Ferrochelatase KM398_05550 PF01593 Flavin containing amine oxidoreductase KM398_05575 PF03965 Penicillinase repressor KM398_05585 PF00440 Bacterial regulatory proteins, tetR family KM398_05585 PF17932 Tetracyclin repressor-like, C-terminal domain KM398_05615 PF00356 Bacterial regulatory proteins, lacI family KM398_05620 PF14149 YhfH-like protein KM398_05625 PF12706 Beta-lactamase superfamily domain KM398_05630 PF03099 Biotin/lipoate A/B protein ligase family KM398_05630 PF10437 Bacterial lipoate protein ligase C-terminus KM398_05640 PF00501 AMP-binding enzyme KM398_05640 PF13193 AMP-binding enzyme C-terminal domain KM398_05650 PF01520 N-acetylmuramoyl-L-alanine amidase KM398_05650 PF00395 S-layer homology domain KM398_05655 PF05593 RHS Repeat KM398_05670 PF05593 RHS Repeat KM398_05715 PF01966 HD domain KM398_05725 PF04542 Sigma-70 region 2 KM398_05725 PF08281 Sigma-70, region 4 KM398_05730 PF12833 Helix-turn-helix domain KM398_05730 PF06445 GyrI-like small molecule binding domain KM398_05745 PF00512 His Kinase A (phospho-acceptor) domain KM398_05745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_05750 PF00486 Transcriptional regulatory protein, C terminal KM398_05750 PF00072 Response regulator receiver domain KM398_05775 PF16491 CAAX prenyl protease N-terminal, five membrane helices KM398_05775 PF01435 Peptidase family M48 KM398_05780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM398_05780 PF00672 HAMP domain KM398_05780 PF02743 Cache domain KM398_05785 PF00892 EamA-like transporter family KM398_05790 PF00150 Cellulase (glycosyl hydrolase family 5) KM398_05790 PF00395 S-layer homology domain KM398_05790 PF03424 Carbohydrate binding domain (family 17/28) KM398_05800 PF00395 S-layer homology domain KM398_05805 PF01274 Malate synthase KM398_05810 PF00463 Isocitrate lyase family KM398_05820 PF00313 'Cold-shock' DNA-binding domain KM398_05835 PF06338 ComK protein KM398_05840 PF09335 SNARE associated Golgi protein KM398_05845 PF10502 Signal peptidase, peptidase S26 KM398_05850 PF13361 UvrD-like helicase C-terminal domain KM398_05850 PF12705 PD-(D/E)XK nuclease superfamily KM398_05855 PF00580 UvrD/REP helicase N-terminal domain KM398_05855 PF12705 PD-(D/E)XK nuclease superfamily KM398_05855 PF13361 UvrD-like helicase C-terminal domain KM398_05865 PF10676 Spore germination protein gerPA/gerPF KM398_05870 PF10970 Spore germination protein GerPE KM398_05880 PF10737 Spore germination protein GerPC KM398_05885 PF10803 Spore germination GerPB KM398_05890 PF10676 Spore germination protein gerPA/gerPF KM398_05900 PF01557 Fumarylacetoacetate (FAA) hydrolase family KM398_05910 PF00202 Aminotransferase class-III KM398_05915 PF07457 Protein of unknown function (DUF1516) KM398_05925 PF00733 Asparagine synthase KM398_05925 PF13537 Glutamine amidotransferase domain KM398_05930 PF00762 Ferrochelatase KM398_05935 PF00199 Catalase KM398_05935 PF06628 Catalase-related immune-responsive KM398_05940 PF00909 Ammonium Transporter Family KM398_05945 PF00128 Alpha amylase, catalytic domain KM398_05955 PF04461 Protein of unknown function (DUF520) KM398_05960 PF17783 CvfB-like winged helix domain KM398_05960 PF13509 S1 domain KM398_05970 PF00639 PPIC-type PPIASE domain KM398_05980 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM398_05980 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM398_05985 PF12758 Protein of unknown function (DUF3813) KM398_06000 PF14168 YjzC-like protein KM398_06005 PF10431 C-terminal, D2-small domain, of ClpB protein KM398_06005 PF02861 Clp amino terminal domain, pathogenicity island component KM398_06005 PF17871 AAA lid domain KM398_06005 PF00004 ATPase family associated with various cellular activities (AAA) KM398_06005 PF07724 AAA domain (Cdc48 subfamily) KM398_06025 PF10815 ComZ KM398_06030 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM398_06030 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM398_06035 PF02801 Beta-ketoacyl synthase, C-terminal domain KM398_06035 PF00109 Beta-ketoacyl synthase, N-terminal domain KM398_06040 PF10026 Predicted Zn-dependent protease (DUF2268) KM398_06045 PF12227 Protein of unknown function (DUF3603) KM398_06050 PF00579 tRNA synthetases class I (W and Y) KM398_06060 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM398_06065 PF00528 Binding-protein-dependent transport system inner membrane component KM398_06070 PF00528 Binding-protein-dependent transport system inner membrane component KM398_06070 PF12911 N-terminal TM domain of oligopeptide transport permease C KM398_06075 PF00005 ABC transporter KM398_06075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM398_06080 PF00005 ABC transporter KM398_06080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM398_06085 PF01554 MatE KM398_06090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM398_06100 PF03960 ArsC family KM398_06105 PF03741 Integral membrane protein TerC family KM398_06110 PF05389 Negative regulator of genetic competence (MecA) KM398_06115 PF13091 PLD-like domain KM398_06115 PF13396 Phospholipase_D-nuclease N-terminal KM398_06125 PF08439 Oligopeptidase F KM398_06125 PF01432 Peptidase family M3 KM398_06140 PF01152 Bacterial-like globin KM398_06145 PF01928 CYTH domain KM398_06155 PF04607 Region found in RelA / SpoT proteins KM398_06160 PF01513 ATP-NAD kinase KM398_06165 PF00849 RNA pseudouridylate synthase KM398_06175 PF00149 Calcineurin-like phosphoesterase KM398_06185 PF00535 Glycosyl transferase family 2 KM398_06190 PF08241 Methyltransferase domain KM398_06195 PF05711 Macrocin-O-methyltransferase (TylF) KM398_06205 PF00535 Glycosyl transferase family 2 KM398_06205 PF13181 Tetratricopeptide repeat KM398_06225 PF00483 Nucleotidyl transferase KM398_06230 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase KM398_06235 PF16363 GDP-mannose 4,6 dehydratase KM398_06240 PF04321 RmlD substrate binding domain KM398_06260 PF07098 Protein of unknown function (DUF1360) KM398_06280 PF00580 UvrD/REP helicase N-terminal domain KM398_06280 PF13361 UvrD-like helicase C-terminal domain KM398_06285 PF13673 Acetyltransferase (GNAT) domain KM398_06295 PF00756 Putative esterase KM398_06310 PF02368 Bacterial Ig-like domain (group 2) KM398_06315 PF00474 Sodium:solute symporter family KM398_06320 PF04715 Anthranilate synthase component I, N terminal region KM398_06320 PF00425 chorismate binding enzyme KM398_06325 PF00117 Glutamine amidotransferase class-I KM398_06325 PF02885 Glycosyl transferase family, helical bundle domain KM398_06325 PF00591 Glycosyl transferase family, a/b domain KM398_06330 PF00591 Glycosyl transferase family, a/b domain KM398_06330 PF02885 Glycosyl transferase family, helical bundle domain KM398_06335 PF00218 Indole-3-glycerol phosphate synthase KM398_06340 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KM398_06345 PF00291 Pyridoxal-phosphate dependent enzyme KM398_06350 PF00290 Tryptophan synthase alpha chain KM398_06360 PF02652 L-lactate permease KM398_06365 PF10042 Uncharacterized conserved protein (DUF2278) KM398_06390 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM398_06390 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM398_06420 PF02817 e3 binding domain KM398_06420 PF00364 Biotin-requiring enzyme KM398_06420 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM398_06425 PF16870 2-oxoglutarate dehydrogenase C-terminal KM398_06425 PF02779 Transketolase, pyrimidine binding domain KM398_06425 PF00676 Dehydrogenase E1 component KM398_06430 PF01381 Helix-turn-helix KM398_06490 PF13649 Methyltransferase domain KM398_06500 PF07943 Penicillin-binding protein 5, C-terminal domain KM398_06500 PF00768 D-alanyl-D-alanine carboxypeptidase KM398_06510 PF12389 Camelysin metallo-endopeptidase KM398_06520 PF12389 Camelysin metallo-endopeptidase KM398_06525 PF01381 Helix-turn-helix KM398_06525 PF08671 Anti-repressor SinI KM398_06535 PF05547 Immune inhibitor A peptidase M6 KM398_06540 PF00171 Aldehyde dehydrogenase family KM398_06545 PF00005 ABC transporter KM398_06545 PF08402 TOBE domain KM398_06550 PF00528 Binding-protein-dependent transport system inner membrane component KM398_06555 PF00528 Binding-protein-dependent transport system inner membrane component KM398_06560 PF13416 Bacterial extracellular solute-binding protein KM398_06570 PF03176 MMPL family KM398_06580 PF01479 S4 domain KM398_06580 PF00849 RNA pseudouridylate synthase KM398_06590 PF00188 Cysteine-rich secretory protein family KM398_06595 PF13183 4Fe-4S dicluster domain KM398_06595 PF02754 Cysteine-rich domain KM398_06600 PF01565 FAD binding domain KM398_06600 PF02913 FAD linked oxidases, C-terminal domain KM398_06605 PF17853 GGDEF-like domain KM398_06605 PF13556 PucR C-terminal helix-turn-helix domain KM398_06605 PF05651 Putative sugar diacid recognition KM398_06615 PF00072 Response regulator receiver domain KM398_06615 PF00486 Transcriptional regulatory protein, C terminal KM398_06620 PF00672 HAMP domain KM398_06620 PF00512 His Kinase A (phospho-acceptor) domain KM398_06620 PF00989 PAS fold KM398_06620 PF18698 Histidine kinase sensor domain KM398_06620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_06625 PF00392 Bacterial regulatory proteins, gntR family KM398_06625 PF07729 FCD domain KM398_06630 PF02754 Cysteine-rich domain KM398_06635 PF02589 LUD domain KM398_06635 PF13183 4Fe-4S dicluster domain KM398_06635 PF11870 Domain of unknown function (DUF3390) KM398_06640 PF02589 LUD domain KM398_06645 PF06750 Bacterial Peptidase A24 N-terminal domain KM398_06645 PF01478 Type IV leader peptidase family KM398_06660 PF01226 Formate/nitrite transporter KM398_06665 PF03741 Integral membrane protein TerC family KM398_06670 PF02386 Cation transport protein KM398_06675 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM398_06680 PF01575 MaoC like domain KM398_06705 PF00561 alpha/beta hydrolase fold KM398_06710 PF01266 FAD dependent oxidoreductase KM398_06715 PF02386 Cation transport protein KM398_06745 PF13419 Haloacid dehalogenase-like hydrolase KM398_06750 PF00266 Aminotransferase class-V KM398_06760 PF00455 DeoR C terminal sensor domain KM398_06760 PF08220 DeoR-like helix-turn-helix domain KM398_06780 PF04748 Divergent polysaccharide deacetylase KM398_06785 PF09388 Spo0E like sporulation regulatory protein KM398_06790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_06790 PF00512 His Kinase A (phospho-acceptor) domain KM398_06790 PF02743 Cache domain KM398_06795 PF01047 MarR family KM398_06805 PF12867 DinB superfamily KM398_06810 PF13188 PAS domain KM398_06810 PF13426 PAS domain KM398_06810 PF00512 His Kinase A (phospho-acceptor) domain KM398_06810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_06810 PF00989 PAS fold KM398_06815 PF06508 Queuosine biosynthesis protein QueC KM398_06820 PF01242 6-pyruvoyl tetrahydropterin synthase KM398_06825 PF04055 Radical SAM superfamily KM398_06830 PF14489 QueF-like protein KM398_06835 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) KM398_06865 PF07972 NrdI Flavodoxin like KM398_06885 PF00268 Ribonucleotide reductase, small chain KM398_06890 PF00392 Bacterial regulatory proteins, gntR family KM398_06895 PF00005 ABC transporter KM398_06905 PF00005 ABC transporter KM398_06925 PF01037 Lrp/AsnC ligand binding domain KM398_06935 PF00857 Isochorismatase family KM398_06945 PF02016 LD-carboxypeptidase N-terminal domain KM398_06945 PF17676 LD-carboxypeptidase C-terminal domain KM398_06950 PF03060 Nitronate monooxygenase KM398_06955 PF04914 DltD protein KM398_06960 PF00550 Phosphopantetheine attachment site KM398_06965 PF03062 MBOAT, membrane-bound O-acyltransferase family KM398_06970 PF00501 AMP-binding enzyme KM398_06970 PF13193 AMP-binding enzyme C-terminal domain KM398_06980 PF07687 Peptidase dimerisation domain KM398_06980 PF01546 Peptidase family M20/M25/M40 KM398_06990 PF00258 Flavodoxin KM398_07005 PF01636 Phosphotransferase enzyme family KM398_07025 PF01554 MatE KM398_07030 PF02673 Bacitracin resistance protein BacA KM398_07045 PF01047 MarR family KM398_07055 PF00375 Sodium:dicarboxylate symporter family KM398_07060 PF02386 Cation transport protein KM398_07070 PF09579 Sporulation protein YtfJ (Spore_YtfJ) KM398_07080 PF03698 Uncharacterised protein family (UPF0180) KM398_07095 PF01063 Amino-transferase class IV KM398_07100 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM398_07100 PF00205 Thiamine pyrophosphate enzyme, central domain KM398_07100 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM398_07105 PF01842 ACT domain KM398_07105 PF10369 Small subunit of acetolactate synthase KM398_07110 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KM398_07110 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KM398_07115 PF00682 HMGL-like KM398_07115 PF08502 LeuA allosteric (dimerisation) domain KM398_07120 PF00180 Isocitrate/isopropylmalate dehydrogenase KM398_07125 PF00330 Aconitase family (aconitate hydratase) KM398_07130 PF00694 Aconitase C-terminal domain KM398_07135 PF13393 Histidyl-tRNA synthetase KM398_07140 PF01634 ATP phosphoribosyltransferase KM398_07145 PF00815 Histidinol dehydrogenase KM398_07150 PF00475 Imidazoleglycerol-phosphate dehydratase KM398_07155 PF00117 Glutamine amidotransferase class-I KM398_07160 PF00977 Histidine biosynthesis protein KM398_07165 PF00977 Histidine biosynthesis protein KM398_07170 PF01502 Phosphoribosyl-AMP cyclohydrolase KM398_07175 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase KM398_07180 PF02811 PHP domain KM398_07190 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KM398_07190 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KM398_07195 PF01066 CDP-alcohol phosphatidyltransferase KM398_07200 PF00884 Sulfatase KM398_07210 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KM398_07210 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KM398_07220 PF01507 Phosphoadenosine phosphosulfate reductase family KM398_07225 PF01747 ATP-sulfurylase KM398_07225 PF14306 PUA-like domain KM398_07235 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KM398_07235 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KM398_07245 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM398_07250 PF01903 CbiX KM398_07260 PF00209 Sodium:neurotransmitter symporter family KM398_07270 PF00375 Sodium:dicarboxylate symporter family KM398_07280 PF03553 Na+/H+ antiporter family KM398_07295 PF09922 Cell wall-active antibiotics response 4TMS YvqF KM398_07300 PF00672 HAMP domain KM398_07300 PF07730 Histidine kinase KM398_07300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_07305 PF00072 Response regulator receiver domain KM398_07305 PF00196 Bacterial regulatory proteins, luxR family KM398_07315 PF05525 Branched-chain amino acid transport protein KM398_07325 PF08241 Methyltransferase domain KM398_07350 PF00970 Oxidoreductase FAD-binding domain KM398_07350 PF00042 Globin KM398_07350 PF00175 Oxidoreductase NAD-binding domain KM398_07365 PF01925 Sulfite exporter TauE/SafE KM398_07370 PF01384 Phosphate transporter family KM398_07375 PF01865 Protein of unknown function DUF47 KM398_07380 PF00905 Penicillin binding protein transpeptidase domain KM398_07380 PF00912 Transglycosylase KM398_07395 PF00512 His Kinase A (phospho-acceptor) domain KM398_07395 PF00989 PAS fold KM398_07395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_07400 PF01904 Protein of unknown function DUF72 KM398_07410 PF00589 Phage integrase family KM398_07415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_07415 PF16736 Single Cache-like KM398_07415 PF00989 PAS fold KM398_07415 PF00512 His Kinase A (phospho-acceptor) domain KM398_07420 PF01048 Phosphorylase superfamily KM398_07435 PF09924 Uncharacterised conserved protein (DUF2156) KM398_07435 PF03706 Lysylphosphatidylglycerol synthase TM region KM398_07450 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KM398_07450 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KM398_07455 PF00768 D-alanyl-D-alanine carboxypeptidase KM398_07455 PF07943 Penicillin-binding protein 5, C-terminal domain KM398_07460 PF07670 Nucleoside recognition KM398_07465 PF07670 Nucleoside recognition KM398_07470 PF00849 RNA pseudouridylate synthase KM398_07470 PF01479 S4 domain KM398_07475 PF00578 AhpC/TSA family KM398_07480 PF05140 ResB-like family KM398_07485 PF01578 Cytochrome C assembly protein KM398_07490 PF00072 Response regulator receiver domain KM398_07490 PF00486 Transcriptional regulatory protein, C terminal KM398_07495 PF00672 HAMP domain KM398_07495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_07495 PF18698 Histidine kinase sensor domain KM398_07495 PF00512 His Kinase A (phospho-acceptor) domain KM398_07495 PF00989 PAS fold KM398_07500 PF01923 Cobalamin adenosyltransferase KM398_07515 PF12822 ECF transporter, substrate-specific component KM398_07525 PF14493 Helix-turn-helix domain KM398_07530 PF00270 DEAD/DEAH box helicase KM398_07530 PF00271 Helicase conserved C-terminal domain KM398_07535 PF02517 CPBP intramembrane metalloprotease KM398_07550 PF13411 MerR HTH family regulatory protein KM398_07550 PF02607 B12 binding domain KM398_07550 PF02310 B12 binding domain KM398_07555 PF05389 Negative regulator of genetic competence (MecA) KM398_07560 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KM398_07560 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KM398_07585 PF00710 Asparaginase, N-terminal KM398_07585 PF17763 Glutaminase/Asparaginase C-terminal domain KM398_07595 PF02224 Cytidylate kinase KM398_07600 PF00575 S1 RNA binding domain KM398_07605 PF01070 FMN-dependent dehydrogenase KM398_07610 PF14140 YpzI-like protein KM398_07620 PF14045 YIEGIA protein KM398_07630 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KM398_07630 PF01926 50S ribosome-binding GTPase KM398_07635 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KM398_07635 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KM398_07645 PF10966 Protein of unknown function (DUF2768) KM398_07655 PF09547 Stage IV sporulation protein A (spore_IV_A) KM398_07660 PF00216 Bacterial DNA-binding protein KM398_07665 PF01227 GTP cyclohydrolase I KM398_07670 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 KM398_07675 PF01209 ubiE/COQ5 methyltransferase family KM398_07680 PF00348 Polyprenyl synthetase KM398_07685 PF00334 Nucleoside diphosphate kinase KM398_07690 PF01264 Chorismate synthase KM398_07695 PF01761 3-dehydroquinate synthase KM398_07700 PF00155 Aminotransferase class I and II KM398_07710 PF08858 IDEAL domain KM398_07710 PF08864 UPF0302 domain KM398_07715 PF10673 Protein of unknown function (DUF2487) KM398_07720 PF00355 Rieske [2Fe-2S] domain KM398_07725 PF00033 Cytochrome b/b6/petB KM398_07730 PF00032 Cytochrome b(C-terminal)/b6/petD KM398_07730 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KM398_07735 PF07187 Protein of unknown function (DUF1405) KM398_07745 PF09577 Sporulation protein YpjB (SpoYpjB) KM398_07750 PF04298 Putative neutral zinc metallopeptidase KM398_07760 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM398_07760 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM398_07765 PF03819 MazG nucleotide pyrophosphohydrolase domain KM398_07770 PF05173 Dihydrodipicolinate reductase, C-terminus KM398_07770 PF01113 Dihydrodipicolinate reductase, N-terminus KM398_07775 PF02142 MGS-like domain KM398_07780 PF02585 GlcNAc-PI de-N-acetylase KM398_07785 PF00534 Glycosyl transferases group 1 KM398_07785 PF13439 Glycosyltransferase Family 4 KM398_07790 PF12627 Probable RNA and SrmB- binding site of polymerase A KM398_07790 PF01743 Poly A polymerase head domain KM398_07790 PF13735 tRNA nucleotidyltransferase domain 2 putative KM398_07795 PF08279 HTH domain KM398_07795 PF03099 Biotin/lipoate A/B protein ligase family KM398_07795 PF02237 Biotin protein ligase C terminal domain KM398_07805 PF02548 Ketopantoate hydroxymethyltransferase KM398_07810 PF02569 Pantoate-beta-alanine ligase KM398_07815 PF02261 Aspartate decarboxylase KM398_07820 PF00929 Exonuclease KM398_07820 PF13307 Helicase C-terminal domain KM398_07820 PF04851 Type III restriction enzyme, res subunit KM398_07825 PF14084 Protein of unknown function (DUF4264) KM398_07835 PF00155 Aminotransferase class I and II KM398_07840 PF07261 Replication initiation and membrane attachment KM398_07845 PF00730 HhH-GPD superfamily base excision DNA repair protein KM398_07845 PF10576 Iron-sulfur binding domain of endonuclease III KM398_07845 PF00633 Helix-hairpin-helix motif KM398_07855 PF00912 Transglycosylase KM398_07855 PF00905 Penicillin binding protein transpeptidase domain KM398_07860 PF03838 Recombination protein U KM398_07865 PF10720 Protein of unknown function (DUF2515) KM398_07900 PF06908 YspA SLOG family KM398_07905 PF05103 DivIVA protein KM398_07915 PF01170 Putative RNA methylase family UPF0020 KM398_07915 PF02926 THUMP domain KM398_07925 PF13307 Helicase C-terminal domain KM398_07930 PF02074 Carboxypeptidase Taq (M32) metallopeptidase KM398_07940 PF01636 Phosphotransferase enzyme family KM398_07945 PF00557 Metallopeptidase family M24 KM398_07950 PF00156 Phosphoribosyl transferase domain KM398_07955 PF00860 Permease family KM398_07960 PF04235 Protein of unknown function (DUF418) KM398_07965 PF00350 Dynamin family KM398_07975 PF00583 Acetyltransferase (GNAT) family KM398_07980 PF10752 Protein of unknown function (DUF2533) KM398_07985 PF00581 Rhodanese-like domain KM398_08020 PF00690 Cation transporter/ATPase, N-terminus KM398_08020 PF00689 Cation transporting ATPase, C-terminus KM398_08025 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KM398_08025 PF01367 5'-3' exonuclease, C-terminal SAM fold KM398_08050 PF02397 Bacterial sugar transferase KM398_08065 PF00535 Glycosyl transferase family 2 KM398_08070 PF13439 Glycosyltransferase Family 4 KM398_08070 PF00534 Glycosyl transferases group 1 KM398_08085 PF13673 Acetyltransferase (GNAT) domain KM398_08085 PF18014 Acetyltransferase (GNAT) domain KM398_08105 PF13456 Reverse transcriptase-like KM398_08110 PF01263 Aldose 1-epimerase KM398_08135 PF00313 'Cold-shock' DNA-binding domain KM398_08145 PF01810 LysE type translocator KM398_08160 PF04341 Protein of unknown function, DUF485 KM398_08165 PF00474 Sodium:solute symporter family KM398_08170 PF00202 Aminotransferase class-III KM398_08180 PF00999 Sodium/hydrogen exchanger family KM398_08185 PF17770 Ribonuclease J C-terminal domain KM398_08185 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KM398_08185 PF00753 Metallo-beta-lactamase superfamily KM398_08190 PF06445 GyrI-like small molecule binding domain KM398_08190 PF13411 MerR HTH family regulatory protein KM398_08200 PF04239 Protein of unknown function (DUF421) KM398_08205 PF02698 DUF218 domain KM398_08215 PF00881 Nitroreductase family KM398_08260 PF17209 Hfq protein KM398_08270 PF01618 MotA/TolQ/ExbB proton channel family KM398_08275 PF00691 OmpA family KM398_08275 PF13677 Membrane MotB of proton-channel complex MotA/MotB KM398_08280 PF00072 Response regulator receiver domain KM398_08285 PF02895 Signal transducing histidine kinase, homodimeric domain KM398_08285 PF01627 Hpt domain KM398_08285 PF07194 P2 response regulator binding domain KM398_08285 PF01584 CheW-like domain KM398_08285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_08290 PF01627 Hpt domain KM398_08290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_08290 PF01584 CheW-like domain KM398_08290 PF02895 Signal transducing histidine kinase, homodimeric domain KM398_08290 PF07194 P2 response regulator binding domain KM398_08295 PF04509 CheC-like family KM398_08295 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KM398_08310 PF01739 CheR methyltransferase, SAM binding domain KM398_08310 PF03705 CheR methyltransferase, all-alpha domain KM398_08330 PF00460 Flagella basal body rod protein KM398_08330 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM398_08355 PF00460 Flagella basal body rod protein KM398_08360 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM398_08360 PF00460 Flagella basal body rod protein KM398_08365 PF02049 Flagellar hook-basal body complex protein FliE KM398_08375 PF01706 FliG C-terminal domain KM398_08375 PF14841 FliG middle domain KM398_08375 PF14842 FliG N-terminal domain KM398_08385 PF18269 T3SS EscN ATPase C-terminal domain KM398_08385 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM398_08385 PF02874 ATP synthase alpha/beta family, beta-barrel domain KM398_08410 PF00460 Flagella basal body rod protein KM398_08410 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM398_08410 PF07559 Flagellar basal body protein FlaE KM398_08425 PF01584 CheW-like domain KM398_08425 PF00072 Response regulator receiver domain KM398_08430 PF12181 DNA binding domain of the motility gene repressor (MogR) KM398_08435 PF00535 Glycosyl transferase family 2 KM398_08470 PF00669 Bacterial flagellin N-terminal helical region KM398_08470 PF00700 Bacterial flagellin C-terminal helical region KM398_08475 PF01464 Transglycosylase SLT domain KM398_08490 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KM398_08490 PF04509 CheC-like family KM398_08500 PF00813 FliP family KM398_08505 PF01313 Bacterial export proteins, family 3 KM398_08515 PF01312 FlhB HrpN YscU SpaS Family KM398_08520 PF00771 FHIPEP family KM398_08525 PF00448 SRP54-type protein, GTPase domain KM398_08530 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM398_08530 PF00460 Flagella basal body rod protein KM398_08535 PF02272 DHHA1 domain KM398_08535 PF01411 tRNA synthetases class II (A) KM398_08535 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM398_08560 PF17932 Tetracyclin repressor-like, C-terminal domain KM398_08560 PF00440 Bacterial regulatory proteins, tetR family KM398_08565 PF17329 Family of unknown function (DUF5367) KM398_08580 PF03992 Antibiotic biosynthesis monooxygenase KM398_08585 PF08141 Small acid-soluble spore protein H family KM398_08605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM398_08605 PF03466 LysR substrate binding domain KM398_08610 PF00005 ABC transporter KM398_08610 PF08402 TOBE domain KM398_08620 PF00528 Binding-protein-dependent transport system inner membrane component KM398_08625 PF00753 Metallo-beta-lactamase superfamily KM398_08625 PF12706 Beta-lactamase superfamily domain KM398_08635 PF10787 Uncharacterised protein from bacillus cereus group KM398_08650 PF07943 Penicillin-binding protein 5, C-terminal domain KM398_08650 PF00768 D-alanyl-D-alanine carboxypeptidase KM398_08660 PF00300 Histidine phosphatase superfamily (branch 1) KM398_08690 PF00733 Asparagine synthase KM398_08690 PF13537 Glutamine amidotransferase domain KM398_08710 PF01545 Cation efflux family KM398_08710 PF16916 Dimerisation domain of Zinc Transporter KM398_08720 PF00392 Bacterial regulatory proteins, gntR family KM398_08720 PF07729 FCD domain KM398_08725 PF00892 EamA-like transporter family KM398_08730 PF07683 Cobalamin synthesis protein cobW C-terminal domain KM398_08730 PF02492 CobW/HypB/UreG, nucleotide-binding domain KM398_08735 PF03773 Predicted permease KM398_08745 PF00535 Glycosyl transferase family 2 KM398_08750 PF03553 Na+/H+ antiporter family KM398_08755 PF10415 Fumarase C C-terminus KM398_08755 PF00206 Lyase KM398_08780 PF03575 Peptidase family S51 KM398_08800 PF02683 Cytochrome C biogenesis protein transmembrane region KM398_08805 PF00578 AhpC/TSA family KM398_08825 PF00291 Pyridoxal-phosphate dependent enzyme KM398_08830 PF04286 Protein of unknown function (DUF445) KM398_08855 PF00072 Response regulator receiver domain KM398_08855 PF00196 Bacterial regulatory proteins, luxR family KM398_08860 PF13492 GAF domain KM398_08860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_08860 PF13185 GAF domain KM398_08860 PF07730 Histidine kinase KM398_08865 PF00005 ABC transporter KM398_08880 PF13091 PLD-like domain KM398_08885 PF00696 Amino acid kinase family KM398_08890 PF00375 Sodium:dicarboxylate symporter family KM398_08895 PF00206 Lyase KM398_08895 PF10415 Fumarase C C-terminus KM398_08900 PF03949 Malic enzyme, NAD binding domain KM398_08900 PF00390 Malic enzyme, N-terminal domain KM398_08905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_08910 PF00072 Response regulator receiver domain KM398_08910 PF08664 YcbB domain KM398_08915 PF04434 SWIM zinc finger KM398_08915 PF00176 SNF2 family N-terminal domain KM398_08915 PF00271 Helicase conserved C-terminal domain KM398_08930 PF03590 Aspartate-ammonia ligase KM398_08950 PF13840 ACT domain KM398_08950 PF00696 Amino acid kinase family KM398_08960 PF13761 Domain of unknown function (DUF4166) KM398_08965 PF14158 YndJ-like protein KM398_08970 PF00293 NUDIX domain KM398_08975 PF00395 S-layer homology domain KM398_08975 PF02368 Bacterial Ig-like domain (group 2) KM398_08975 PF13205 Bacterial Ig-like domain KM398_08985 PF07690 Major Facilitator Superfamily KM398_09000 PF02554 Carbon starvation protein CstA KM398_09005 PF03976 Polyphosphate kinase 2 (PPK2) KM398_09015 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM398_09015 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM398_09025 PF16360 GTP-binding GTPase Middle Region KM398_09025 PF13167 GTP-binding GTPase N-terminal KM398_09025 PF01926 50S ribosome-binding GTPase KM398_09035 PF07690 Major Facilitator Superfamily KM398_09040 PF00291 Pyridoxal-phosphate dependent enzyme KM398_09055 PF14667 Polysaccharide biosynthesis C-terminal domain KM398_09055 PF01943 Polysaccharide biosynthesis protein KM398_09060 PF00209 Sodium:neurotransmitter symporter family KM398_09065 PF00457 Glycosyl hydrolases family 11 KM398_09065 PF03422 Carbohydrate binding module (family 6) KM398_09065 PF01522 Polysaccharide deacetylase KM398_09075 PF04239 Protein of unknown function (DUF421) KM398_09090 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KM398_09090 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM398_09105 PF01625 Peptide methionine sulfoxide reductase KM398_09115 PF01063 Amino-transferase class IV KM398_09120 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM398_09120 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM398_09120 PF00205 Thiamine pyrophosphate enzyme, central domain KM398_09125 PF10369 Small subunit of acetolactate synthase KM398_09130 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KM398_09130 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KM398_09135 PF00920 Dehydratase family KM398_09140 PF00291 Pyridoxal-phosphate dependent enzyme KM398_09140 PF00585 C-terminal regulatory domain of Threonine dehydratase KM398_09150 PF09587 Bacterial capsule synthesis protein PGA_cap KM398_09165 PF07690 Major Facilitator Superfamily KM398_09170 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase KM398_09180 PF04397 LytTr DNA-binding domain KM398_09180 PF00072 Response regulator receiver domain KM398_09185 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain KM398_09185 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain KM398_09200 PF01979 Amidohydrolase family KM398_09205 PF13026 Protein of unknown function (DUF3887) KM398_09205 PF12146 Serine aminopeptidase, S33 KM398_09235 PF04055 Radical SAM superfamily KM398_09235 PF13186 Iron-sulfur cluster-binding domain KM398_09240 PF13302 Acetyltransferase (GNAT) domain KM398_09245 PF00486 Transcriptional regulatory protein, C terminal KM398_09245 PF00072 Response regulator receiver domain KM398_09260 PF01566 Natural resistance-associated macrophage protein KM398_09265 PF17773 UPF0176 acylphosphatase like domain KM398_09265 PF00581 Rhodanese-like domain KM398_09265 PF12368 Rhodanase C-terminal KM398_09275 PF02558 Ketopantoate reductase PanE/ApbA KM398_09275 PF08546 Ketopantoate reductase PanE/ApbA C terminal KM398_09290 PF05791 Bacillus haemolytic enterotoxin (HBL) KM398_09305 PF04198 Putative sugar-binding domain KM398_09310 PF01791 DeoC/LacD family aldolase KM398_09315 PF01773 Na+ dependent nucleoside transporter N-terminus KM398_09315 PF07662 Na+ dependent nucleoside transporter C-terminus KM398_09320 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain KM398_09320 PF02885 Glycosyl transferase family, helical bundle domain KM398_09320 PF00591 Glycosyl transferase family, a/b domain KM398_09325 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM398_09335 PF05979 Bacterial protein of unknown function (DUF896) KM398_09355 PF05195 Aminopeptidase P, N-terminal domain KM398_09355 PF00557 Metallopeptidase family M24 KM398_09360 PF07731 Multicopper oxidase KM398_09360 PF07732 Multicopper oxidase KM398_09365 PF01551 Peptidase family M23 KM398_09375 PF13342 C-terminal repeat of topoisomerase KM398_09375 PF01396 Topoisomerase DNA binding C4 zinc finger KM398_09375 PF01751 Toprim domain KM398_09375 PF01131 DNA topoisomerase KM398_09390 PF02525 Flavodoxin-like fold KM398_09405 PF13115 YtkA-like KM398_09405 PF04234 CopC domain KM398_09405 PF05425 Copper resistance protein D KM398_09410 PF07987 Domain of unkown function (DUF1775) KM398_09420 PF00892 EamA-like transporter family KM398_09425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM398_09425 PF03466 LysR substrate binding domain KM398_09430 PF02082 Transcriptional regulator KM398_09435 PF01323 DSBA-like thioredoxin domain KM398_09440 PF00881 Nitroreductase family KM398_09445 PF01425 Amidase KM398_09450 PF01594 AI-2E family transporter KM398_09455 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KM398_09455 PF00056 lactate/malate dehydrogenase, NAD binding domain KM398_09460 PF01593 Flavin containing amine oxidoreductase KM398_09465 PF07683 Cobalamin synthesis protein cobW C-terminal domain KM398_09465 PF02492 CobW/HypB/UreG, nucleotide-binding domain KM398_09480 PF13193 AMP-binding enzyme C-terminal domain KM398_09480 PF00501 AMP-binding enzyme KM398_09485 PF01575 MaoC like domain KM398_09490 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM398_09490 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM398_09500 PF12399 Branched-chain amino acid ATP-binding cassette transporter KM398_09500 PF00005 ABC transporter KM398_09505 PF00005 ABC transporter KM398_09510 PF02653 Branched-chain amino acid transport system / permease component KM398_09520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM398_09520 PF03466 LysR substrate binding domain KM398_09530 PF14552 Tautomerase enzyme KM398_09540 PF01047 MarR family KM398_09550 PF01654 Cytochrome bd terminal oxidase subunit I KM398_09555 PF02322 Cytochrome bd terminal oxidase subunit II KM398_09560 PF00005 ABC transporter KM398_09560 PF00664 ABC transporter transmembrane region KM398_09565 PF00005 ABC transporter KM398_09565 PF00664 ABC transporter transmembrane region KM398_09580 PF02016 LD-carboxypeptidase N-terminal domain KM398_09580 PF17676 LD-carboxypeptidase C-terminal domain KM398_09585 PF07943 Penicillin-binding protein 5, C-terminal domain KM398_09585 PF00768 D-alanyl-D-alanine carboxypeptidase KM398_09600 PF01476 LysM domain KM398_09600 PF00877 NlpC/P60 family KM398_09615 PF00072 Response regulator receiver domain KM398_09615 PF00486 Transcriptional regulatory protein, C terminal KM398_09620 PF00989 PAS fold KM398_09620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_09620 PF16736 Single Cache-like KM398_09620 PF00512 His Kinase A (phospho-acceptor) domain KM398_09630 PF00106 short chain dehydrogenase KM398_09640 PF04439 Streptomycin adenylyltransferase KM398_09645 PF01522 Polysaccharide deacetylase KM398_09665 PF01842 ACT domain KM398_09665 PF00742 Homoserine dehydrogenase KM398_09665 PF03447 Homoserine dehydrogenase, NAD binding domain KM398_09670 PF00291 Pyridoxal-phosphate dependent enzyme KM398_09675 PF08544 GHMP kinases C terminal KM398_09675 PF00288 GHMP kinases N terminal domain KM398_09690 PF03816 Cell envelope-related transcriptional attenuator domain KM398_09700 PF00072 Response regulator receiver domain KM398_09700 PF00486 Transcriptional regulatory protein, C terminal KM398_09705 PF16736 Single Cache-like KM398_09705 PF00989 PAS fold KM398_09705 PF00512 His Kinase A (phospho-acceptor) domain KM398_09705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_09710 PF01522 Polysaccharide deacetylase KM398_09720 PF02308 MgtC family KM398_09725 PF00583 Acetyltransferase (GNAT) family KM398_09730 PF06276 Ferric iron reductase FhuF-like transporter KM398_09730 PF04183 IucA / IucC family KM398_09735 PF06276 Ferric iron reductase FhuF-like transporter KM398_09735 PF04183 IucA / IucC family KM398_09740 PF00501 AMP-binding enzyme KM398_09740 PF13193 AMP-binding enzyme C-terminal domain KM398_09755 PF01261 Xylose isomerase-like TIM barrel KM398_09760 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM398_09770 PF01810 LysE type translocator KM398_09780 PF01734 Patatin-like phospholipase KM398_09805 PF13344 Haloacid dehalogenase-like hydrolase KM398_09805 PF00293 NUDIX domain KM398_09810 PF02540 NAD synthase KM398_09820 PF18277 AbrB C-terminal domain KM398_09820 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KM398_09825 PF00082 Subtilase family KM398_09830 PF01022 Bacterial regulatory protein, arsR family KM398_09835 PF00248 Aldo/keto reductase family KM398_09840 PF07690 Major Facilitator Superfamily KM398_09860 PF03193 RsgA GTPase KM398_09865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM398_09865 PF00672 HAMP domain KM398_09865 PF02743 Cache domain KM398_09885 PF00210 Ferritin-like domain KM398_09900 PF00296 Luciferase-like monooxygenase KM398_09910 PF01593 Flavin containing amine oxidoreductase KM398_09920 PF00248 Aldo/keto reductase family KM398_09925 PF02492 CobW/HypB/UreG, nucleotide-binding domain KM398_09925 PF07683 Cobalamin synthesis protein cobW C-terminal domain KM398_09930 PF00583 Acetyltransferase (GNAT) family KM398_09985 PF01297 Zinc-uptake complex component A periplasmic KM398_09985 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment KM398_09995 PF13460 NAD(P)H-binding KM398_10000 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KM398_10005 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KM398_10005 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KM398_10015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM398_10020 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM398_10030 PF00300 Histidine phosphatase superfamily (branch 1) KM398_10040 PF08757 CotH kinase protein KM398_10045 PF00293 NUDIX domain KM398_10050 PF09335 SNARE associated Golgi protein KM398_10055 PF01943 Polysaccharide biosynthesis protein KM398_10055 PF14667 Polysaccharide biosynthesis C-terminal domain KM398_10065 PF03773 Predicted permease KM398_10070 PF09323 Domain of unknown function (DUF1980) KM398_10075 PF03061 Thioesterase superfamily KM398_10085 PF13091 PLD-like domain KM398_10085 PF13396 Phospholipase_D-nuclease N-terminal KM398_10100 PF13460 NAD(P)H-binding KM398_10105 PF04306 Protein of unknown function (DUF456) KM398_10110 PF00571 CBS domain KM398_10110 PF03471 Transporter associated domain KM398_10110 PF01595 Cyclin M transmembrane N-terminal domain KM398_10125 PF05525 Branched-chain amino acid transport protein KM398_10130 PF01588 Putative tRNA binding domain KM398_10150 PF07454 Stage II sporulation protein P (SpoIIP) KM398_10160 PF02557 D-alanyl-D-alanine carboxypeptidase KM398_10170 PF01425 Amidase KM398_10175 PF07690 Major Facilitator Superfamily KM398_10185 PF01145 SPFH domain / Band 7 family KM398_10190 PF00300 Histidine phosphatase superfamily (branch 1) KM398_10205 PF00842 Alanine racemase, C-terminal domain KM398_10205 PF01168 Alanine racemase, N-terminal domain KM398_10210 PF13847 Methyltransferase domain KM398_10225 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase KM398_10230 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM398_10230 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM398_10235 PF00392 Bacterial regulatory proteins, gntR family KM398_10235 PF00155 Aminotransferase class I and II KM398_10260 PF00583 Acetyltransferase (GNAT) family KM398_10310 PF09579 Sporulation protein YtfJ (Spore_YtfJ) KM398_10335 PF01209 ubiE/COQ5 methyltransferase family KM398_10340 PF01268 Formate--tetrahydrofolate ligase KM398_10350 PF00271 Helicase conserved C-terminal domain KM398_10350 PF00270 DEAD/DEAH box helicase KM398_10360 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM398_10370 PF08240 Alcohol dehydrogenase GroES-like domain KM398_10370 PF00107 Zinc-binding dehydrogenase KM398_10375 PF04542 Sigma-70 region 2 KM398_10375 PF08281 Sigma-70, region 4 KM398_10400 PF00255 Glutathione peroxidase KM398_10405 PF11992 Domain of unknown function (DUF3488) KM398_10405 PF01841 Transglutaminase-like superfamily KM398_10405 PF13559 Domain of unknown function (DUF4129) KM398_10410 PF01882 Protein of unknown function DUF58 KM398_10415 PF17863 AAA lid domain KM398_10415 PF07726 ATPase family associated with various cellular activities (AAA) KM398_10430 PF14710 Respiratory nitrate reductase alpha N-terminal KM398_10430 PF01568 Molydopterin dinucleotide binding domain KM398_10430 PF00384 Molybdopterin oxidoreductase KM398_10435 PF14711 Respiratory nitrate reductase beta C-terminal KM398_10435 PF13247 4Fe-4S dicluster domain KM398_10440 PF02613 Nitrate reductase delta subunit KM398_10445 PF02665 Nitrate reductase gamma subunit KM398_10450 PF00155 Aminotransferase class I and II KM398_10450 PF00392 Bacterial regulatory proteins, gntR family KM398_10455 PF00005 ABC transporter KM398_10465 PF00325 Bacterial regulatory proteins, crp family KM398_10465 PF00027 Cyclic nucleotide-binding domain KM398_10470 PF06463 Molybdenum Cofactor Synthesis C KM398_10470 PF04055 Radical SAM superfamily KM398_10475 PF00899 ThiF family KM398_10480 PF00994 Probable molybdopterin binding domain KM398_10480 PF03454 MoeA C-terminal region (domain IV) KM398_10480 PF03453 MoeA N-terminal region (domain I and II) KM398_10485 PF02391 MoaE protein KM398_10495 PF07690 Major Facilitator Superfamily KM398_10515 PF01903 CbiX KM398_10520 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM398_10525 PF00355 Rieske [2Fe-2S] domain KM398_10530 PF18267 Rubredoxin NAD+ reductase C-terminal domain KM398_10530 PF04324 BFD-like [2Fe-2S] binding domain KM398_10530 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KM398_10530 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KM398_10530 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM398_10535 PF01814 Hemerythrin HHE cation binding domain KM398_10535 PF04405 Domain of Unknown function (DUF542) KM398_10570 PF04232 Stage V sporulation protein S (SpoVS) KM398_10585 PF01510 N-acetylmuramoyl-L-alanine amidase KM398_10600 PF01966 HD domain KM398_10605 PF16326 ABC transporter C-terminal domain KM398_10605 PF12848 ABC transporter KM398_10605 PF00005 ABC transporter KM398_10620 PF00436 Single-strand binding protein family KM398_10625 PF00440 Bacterial regulatory proteins, tetR family KM398_10635 PF13769 Virulence factor KM398_10635 PF08712 Scaffold protein Nfu/NifU N terminal KM398_10645 PF06491 Disulphide isomerase KM398_10650 PF04445 Putative SAM-dependent methyltransferase KM398_10655 PF03485 Arginyl tRNA synthetase N terminal domain KM398_10655 PF05746 DALR anticodon binding domain KM398_10655 PF00750 tRNA synthetases class I (R) KM398_10680 PF08264 Anticodon-binding domain of tRNA KM398_10680 PF00133 tRNA synthetases class I (I, L, M and V) KM398_10700 PF01336 OB-fold nucleic acid binding domain KM398_10700 PF00152 tRNA synthetases class II (D, K and N) KM398_10720 PF01580 FtsK/SpoIIIE family KM398_10720 PF12538 DNA transporter KM398_10790 PF02595 Glycerate kinase family KM398_10795 PF00939 Sodium:sulfate symporter transmembrane region KM398_10800 PF00072 Response regulator receiver domain KM398_10800 PF00486 Transcriptional regulatory protein, C terminal KM398_10805 PF00512 His Kinase A (phospho-acceptor) domain KM398_10805 PF00672 HAMP domain KM398_10805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_10820 PF00209 Sodium:neurotransmitter symporter family KM398_10835 PF10997 Alternate to MurJ KM398_10840 PF13419 Haloacid dehalogenase-like hydrolase KM398_10850 PF00465 Iron-containing alcohol dehydrogenase KM398_10855 PF01177 Asp/Glu/Hydantoin racemase KM398_10860 PF01980 tRNA-methyltransferase O KM398_10865 PF00583 Acetyltransferase (GNAT) family KM398_10880 PF00005 ABC transporter KM398_10890 PF14005 YpjP-like protein KM398_10895 PF13419 Haloacid dehalogenase-like hydrolase KM398_10915 PF00144 Beta-lactamase KM398_10915 PF07930 D-aminopeptidase, domain B KM398_10920 PF00303 Thymidylate synthase KM398_10925 PF00186 Dihydrofolate reductase KM398_10930 PF05223 NTF2-like N-terminal transpeptidase domain KM398_10930 PF03717 Penicillin-binding Protein dimerisation domain KM398_10930 PF00905 Penicillin binding protein transpeptidase domain KM398_10935 PF02525 Flavodoxin-like fold KM398_10940 PF01553 Acyltransferase KM398_10945 PF03006 Haemolysin-III related KM398_10950 PF02416 mttA/Hcf106 family KM398_10955 PF00902 Sec-independent protein translocase protein (TatC) KM398_10965 PF02645 Uncharacterised protein, DegV family COG1307 KM398_10975 PF02630 SCO1/SenC KM398_10980 PF00011 Hsp20/alpha crystallin family KM398_10985 PF00733 Asparagine synthase KM398_10985 PF13537 Glutamine amidotransferase domain KM398_11000 PF01497 Periplasmic binding protein KM398_11005 PF01063 Amino-transferase class IV KM398_11010 PF00881 Nitroreductase family KM398_11030 PF00293 NUDIX domain KM398_11035 PF00011 Hsp20/alpha crystallin family KM398_11040 PF00924 Mechanosensitive ion channel KM398_11045 PF13185 GAF domain KM398_11045 PF07730 Histidine kinase KM398_11050 PF00196 Bacterial regulatory proteins, luxR family KM398_11050 PF00072 Response regulator receiver domain KM398_11060 PF08240 Alcohol dehydrogenase GroES-like domain KM398_11060 PF00107 Zinc-binding dehydrogenase KM398_11085 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM398_11085 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM398_11090 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM398_11090 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM398_11105 PF03358 NADPH-dependent FMN reductase KM398_11120 PF00571 CBS domain KM398_11120 PF00005 ABC transporter KM398_11125 PF00528 Binding-protein-dependent transport system inner membrane component KM398_11130 PF13520 Amino acid permease KM398_11160 PF03471 Transporter associated domain KM398_11160 PF00571 CBS domain KM398_11160 PF01595 Cyclin M transmembrane N-terminal domain KM398_11165 PF00171 Aldehyde dehydrogenase family KM398_11170 PF07997 Protein of unknown function (DUF1694) KM398_11175 PF09385 Histidine kinase N terminal KM398_11185 PF00202 Aminotransferase class-III KM398_11190 PF01144 Coenzyme A transferase KM398_11195 PF01144 Coenzyme A transferase KM398_11200 PF07687 Peptidase dimerisation domain KM398_11200 PF01546 Peptidase family M20/M25/M40 KM398_11205 PF00583 Acetyltransferase (GNAT) family KM398_11210 PF13426 PAS domain KM398_11210 PF02954 Bacterial regulatory protein, Fis family KM398_11210 PF00158 Sigma-54 interaction domain KM398_11215 PF12544 Lysine-2,3-aminomutase KM398_11220 PF14122 YokU-like protein, putative antitoxin KM398_11225 PF06855 YozE SAM-like fold KM398_11240 PF14162 YozD-like protein KM398_11255 PF07070 SpoOM protein KM398_11260 PF01569 PAP2 superfamily KM398_11265 PF01545 Cation efflux family KM398_11265 PF16916 Dimerisation domain of Zinc Transporter KM398_11270 PF00085 Thioredoxin KM398_11285 PF14436 Bacterial EndoU nuclease KM398_11285 PF04740 LXG domain of WXG superfamily KM398_11290 PF00150 Cellulase (glycosyl hydrolase family 5) KM398_11290 PF03424 Carbohydrate binding domain (family 17/28) KM398_11290 PF00395 S-layer homology domain KM398_11300 PF04471 Restriction endonuclease KM398_11410 PF10676 Spore germination protein gerPA/gerPF KM398_11430 PF00912 Transglycosylase KM398_11430 PF00905 Penicillin binding protein transpeptidase domain KM398_11435 PF07690 Major Facilitator Superfamily KM398_11440 PF01521 Iron-sulphur cluster biosynthesis KM398_11445 PF00285 Citrate synthase, C-terminal domain KM398_11450 PF03972 MmgE/PrpD family KM398_11460 PF02770 Acyl-CoA dehydrogenase, middle domain KM398_11460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM398_11460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM398_11465 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KM398_11465 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM398_11470 PF00171 Aldehyde dehydrogenase family KM398_11475 PF01810 LysE type translocator KM398_11480 PF00378 Enoyl-CoA hydratase/isomerase KM398_11490 PF10763 Protein of unknown function (DUF2584) KM398_11495 PF12320 Type 5 capsule protein repressor C-terminal domain KM398_11495 PF00149 Calcineurin-like phosphoesterase KM398_11500 PF13476 AAA domain KM398_11515 PF01022 Bacterial regulatory protein, arsR family KM398_11525 PF07690 Major Facilitator Superfamily KM398_11530 PF00106 short chain dehydrogenase KM398_11535 PF00425 chorismate binding enzyme KM398_11540 PF00501 AMP-binding enzyme KM398_11540 PF13193 AMP-binding enzyme C-terminal domain KM398_11545 PF00857 Isochorismatase family KM398_11545 PF00550 Phosphopantetheine attachment site KM398_11550 PF00550 Phosphopantetheine attachment site KM398_11550 PF00975 Thioesterase domain KM398_11550 PF00501 AMP-binding enzyme KM398_11550 PF13193 AMP-binding enzyme C-terminal domain KM398_11550 PF00668 Condensation domain KM398_11555 PF03621 MbtH-like protein KM398_11560 PF07690 Major Facilitator Superfamily KM398_11575 PF00216 Bacterial DNA-binding protein KM398_11585 PF05163 DinB family KM398_11590 PF00082 Subtilase family KM398_11595 PF01235 Sodium:alanine symporter family KM398_11610 PF16291 Domain of unknown function (DUF4937 KM398_11615 PF01479 S4 domain KM398_11615 PF00849 RNA pseudouridylate synthase KM398_11620 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM398_11620 PF03129 Anticodon binding domain KM398_11620 PF02824 TGS domain KM398_11620 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM398_11635 PF12146 Serine aminopeptidase, S33 KM398_11640 PF07690 Major Facilitator Superfamily KM398_11660 PF13649 Methyltransferase domain KM398_11705 PF16123 Hydroxyacylglutathione hydrolase C-terminus KM398_11705 PF00753 Metallo-beta-lactamase superfamily KM398_11715 PF03176 MMPL family KM398_11725 PF00302 Chloramphenicol acetyltransferase KM398_11740 PF00583 Acetyltransferase (GNAT) family KM398_11770 PF01593 Flavin containing amine oxidoreductase KM398_11780 PF13302 Acetyltransferase (GNAT) domain KM398_11790 PF00313 'Cold-shock' DNA-binding domain KM398_11855 PF03466 LysR substrate binding domain KM398_11855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM398_11860 PF01118 Semialdehyde dehydrogenase, NAD binding domain KM398_11860 PF02774 Semialdehyde dehydrogenase, dimerisation domain KM398_11875 PF03466 LysR substrate binding domain KM398_11875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM398_11880 PF03475 3-alpha domain KM398_11880 PF03473 MOSC domain KM398_11895 PF00005 ABC transporter KM398_11895 PF00664 ABC transporter transmembrane region KM398_11900 PF00005 ABC transporter KM398_11900 PF00664 ABC transporter transmembrane region KM398_11915 PF01810 LysE type translocator KM398_11920 PF07883 Cupin domain KM398_11920 PF01381 Helix-turn-helix KM398_11945 PF00890 FAD binding domain KM398_11950 PF04542 Sigma-70 region 2 KM398_11950 PF08281 Sigma-70, region 4 KM398_11950 PF12680 SnoaL-like domain KM398_11975 PF02638 Glycosyl hydrolase-like 10 KM398_11985 PF02378 Phosphotransferase system, EIIC KM398_11995 PF03702 Anhydro-N-acetylmuramic acid kinase KM398_12000 PF01869 BadF/BadG/BcrA/BcrD ATPase family KM398_12005 PF02660 Glycerol-3-phosphate acyltransferase KM398_12010 PF00266 Aminotransferase class-V KM398_12015 PF00291 Pyridoxal-phosphate dependent enzyme KM398_12030 PF16123 Hydroxyacylglutathione hydrolase C-terminus KM398_12030 PF00753 Metallo-beta-lactamase superfamily KM398_12045 PF00270 DEAD/DEAH box helicase KM398_12045 PF00271 Helicase conserved C-terminal domain KM398_12060 PF00440 Bacterial regulatory proteins, tetR family KM398_12060 PF17932 Tetracyclin repressor-like, C-terminal domain KM398_12075 PF02687 FtsX-like permease family KM398_12075 PF12704 MacB-like periplasmic core domain KM398_12075 PF00005 ABC transporter KM398_12080 PF03848 Tellurite resistance protein TehB KM398_12080 PF09313 Domain of unknown function (DUF1971) KM398_12090 PF08241 Methyltransferase domain KM398_12095 PF00205 Thiamine pyrophosphate enzyme, central domain KM398_12095 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM398_12095 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM398_12100 PF12802 MarR family KM398_12105 PF00300 Histidine phosphatase superfamily (branch 1) KM398_12110 PF14171 Toxin SpoIISA, type II toxin-antitoxin system KM398_12140 PF01546 Peptidase family M20/M25/M40 KM398_12140 PF07687 Peptidase dimerisation domain KM398_12155 PF04542 Sigma-70 region 2 KM398_12155 PF08281 Sigma-70, region 4 KM398_12165 PF03717 Penicillin-binding Protein dimerisation domain KM398_12165 PF00905 Penicillin binding protein transpeptidase domain KM398_12180 PF01569 PAP2 superfamily KM398_12185 PF00356 Bacterial regulatory proteins, lacI family KM398_12190 PF07690 Major Facilitator Superfamily KM398_12195 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM398_12195 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KM398_12200 PF00294 pfkB family carbohydrate kinase KM398_12205 PF00171 Aldehyde dehydrogenase family KM398_12210 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM398_12210 PF00205 Thiamine pyrophosphate enzyme, central domain KM398_12210 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM398_12215 PF01261 Xylose isomerase-like TIM barrel KM398_12220 PF01116 Fructose-bisphosphate aldolase class-II KM398_12225 PF04962 KduI/IolB family KM398_12250 PF18801 response regulator aspartate phosphatase H, N terminal KM398_12255 PF01381 Helix-turn-helix KM398_12270 PF02557 D-alanyl-D-alanine carboxypeptidase KM398_12280 PF01520 N-acetylmuramoyl-L-alanine amidase KM398_12280 PF00395 S-layer homology domain KM398_12290 PF00440 Bacterial regulatory proteins, tetR family KM398_12295 PF00005 ABC transporter KM398_12295 PF16326 ABC transporter C-terminal domain KM398_12305 PF03707 Bacterial signalling protein N terminal repeat KM398_12305 PF00990 Diguanylate cyclase, GGDEF domain KM398_12305 PF00563 EAL domain KM398_12310 PF13302 Acetyltransferase (GNAT) domain KM398_12325 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM398_12330 PF00581 Rhodanese-like domain KM398_12345 PF00005 ABC transporter KM398_12355 PF08359 YsiA-like protein, C-terminal region KM398_12355 PF00440 Bacterial regulatory proteins, tetR family KM398_12370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM398_12370 PF02770 Acyl-CoA dehydrogenase, middle domain KM398_12370 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM398_12375 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM398_12375 PF00289 Biotin carboxylase, N-terminal domain KM398_12375 PF02785 Biotin carboxylase C-terminal domain KM398_12380 PF00364 Biotin-requiring enzyme KM398_12385 PF00682 HMGL-like KM398_12390 PF00378 Enoyl-CoA hydratase/isomerase KM398_12395 PF01039 Carboxyl transferase domain KM398_12400 PF00501 AMP-binding enzyme KM398_12400 PF16177 Acetyl-coenzyme A synthetase N-terminus KM398_12400 PF13193 AMP-binding enzyme C-terminal domain KM398_12410 PF00583 Acetyltransferase (GNAT) family KM398_12415 PF00485 Phosphoribulokinase / Uridine kinase family KM398_12425 PF05163 DinB family KM398_12430 PF00768 D-alanyl-D-alanine carboxypeptidase KM398_12430 PF07943 Penicillin-binding protein 5, C-terminal domain KM398_12435 PF00512 His Kinase A (phospho-acceptor) domain KM398_12435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_12440 PF00486 Transcriptional regulatory protein, C terminal KM398_12440 PF00072 Response regulator receiver domain KM398_12445 PF01966 HD domain KM398_12450 PF13021 Domain of unknown function (DUF3885) KM398_12455 PF01048 Phosphorylase superfamily KM398_12495 PF17760 UvrA interaction domain KM398_12495 PF17755 UvrA DNA-binding domain KM398_12495 PF17755 UvrA DNA-binding domain KM398_12495 PF17760 UvrA interaction domain KM398_12510 PF00144 Beta-lactamase KM398_12515 PF00376 MerR family regulatory protein KM398_12515 PF09278 MerR, DNA binding KM398_12520 PF07690 Major Facilitator Superfamily KM398_12540 PF01636 Phosphotransferase enzyme family KM398_12545 PF12833 Helix-turn-helix domain KM398_12560 PF00392 Bacterial regulatory proteins, gntR family KM398_12560 PF00155 Aminotransferase class I and II KM398_12575 PF08240 Alcohol dehydrogenase GroES-like domain KM398_12575 PF00107 Zinc-binding dehydrogenase KM398_12605 PF07486 Cell Wall Hydrolase KM398_12615 PF00072 Response regulator receiver domain KM398_12615 PF00486 Transcriptional regulatory protein, C terminal KM398_12630 PF12848 ABC transporter KM398_12630 PF00005 ABC transporter KM398_12645 PF00005 ABC transporter KM398_12670 PF01842 ACT domain KM398_12670 PF00742 Homoserine dehydrogenase KM398_12670 PF03447 Homoserine dehydrogenase, NAD binding domain KM398_12675 PF00155 Aminotransferase class I and II KM398_12675 PF00392 Bacterial regulatory proteins, gntR family KM398_12680 PF07478 D-ala D-ala ligase C-terminus KM398_12680 PF01820 D-ala D-ala ligase N-terminus KM398_12685 PF03070 TENA/THI-4/PQQC family KM398_12750 PF00067 Cytochrome P450 KM398_12760 PF00132 Bacterial transferase hexapeptide (six repeats) KM398_12765 PF07561 Domain of Unknown Function (DUF1540) KM398_12775 PF00067 Cytochrome P450 KM398_12795 PF13426 PAS domain KM398_12795 PF13188 PAS domain KM398_12795 PF00989 PAS fold KM398_12795 PF00512 His Kinase A (phospho-acceptor) domain KM398_12795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_12800 PF00905 Penicillin binding protein transpeptidase domain KM398_12800 PF03717 Penicillin-binding Protein dimerisation domain KM398_12805 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase KM398_12810 PF01177 Asp/Glu/Hydantoin racemase KM398_12815 PF07155 ECF-type riboflavin transporter, S component KM398_12820 PF12558 ATP-binding cassette cobalt transporter KM398_12820 PF00005 ABC transporter KM398_12835 PF00512 His Kinase A (phospho-acceptor) domain KM398_12835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_12845 PF04229 GrpB protein KM398_12850 PF00107 Zinc-binding dehydrogenase KM398_12850 PF08240 Alcohol dehydrogenase GroES-like domain KM398_12855 PF00905 Penicillin binding protein transpeptidase domain KM398_12855 PF03717 Penicillin-binding Protein dimerisation domain KM398_12855 PF03793 PASTA domain KM398_12865 PF11954 Domain of unknown function (DUF3471) KM398_12865 PF00144 Beta-lactamase KM398_12900 PF01965 DJ-1/PfpI family KM398_12915 PF00144 Beta-lactamase KM398_12930 PF07690 Major Facilitator Superfamily KM398_12945 PF03009 Glycerophosphoryl diester phosphodiesterase family KM398_12965 PF00892 EamA-like transporter family KM398_12970 PF01270 Glycosyl hydrolases family 8 KM398_12980 PF00293 NUDIX domain KM398_12990 PF00144 Beta-lactamase KM398_13000 PF07690 Major Facilitator Superfamily KM398_13015 PF09297 NADH pyrophosphatase zinc ribbon domain KM398_13015 PF00293 NUDIX domain KM398_13020 PF02768 DNA polymerase III beta subunit, C-terminal domain KM398_13020 PF02767 DNA polymerase III beta subunit, central domain KM398_13020 PF00712 DNA polymerase III beta subunit, N-terminal domain KM398_13025 PF00293 NUDIX domain KM398_13040 PF12706 Beta-lactamase superfamily domain KM398_13060 PF09234 Domain of unknown function (DUF1963) KM398_13085 PF08000 Bacterial PH domain KM398_13095 PF12867 DinB superfamily KM398_13110 PF02673 Bacitracin resistance protein BacA KM398_13120 PF01541 GIY-YIG catalytic domain KM398_13165 PF01266 FAD dependent oxidoreductase KM398_13190 PF13419 Haloacid dehalogenase-like hydrolase KM398_13210 PF00282 Pyridoxal-dependent decarboxylase conserved domain KM398_13215 PF00668 Condensation domain KM398_13215 PF00550 Phosphopantetheine attachment site KM398_13215 PF13193 AMP-binding enzyme C-terminal domain KM398_13215 PF00501 AMP-binding enzyme KM398_13225 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KM398_13225 PF00128 Alpha amylase, catalytic domain KM398_13225 PF03714 Bacterial pullanase-associated domain KM398_13230 PF02868 Thermolysin metallopeptidase, alpha-helical domain KM398_13230 PF07504 Fungalysin/Thermolysin Propeptide Motif KM398_13230 PF03413 Peptidase propeptide and YPEB domain KM398_13230 PF01447 Thermolysin metallopeptidase, catalytic domain KM398_13250 PF00344 SecY translocase KM398_13255 PF11638 DnaA N-terminal domain KM398_13255 PF08299 Bacterial dnaA protein helix-turn-helix KM398_13255 PF00308 Bacterial dnaA protein KM398_13260 PF00892 EamA-like transporter family KM398_13265 PF00155 Aminotransferase class I and II KM398_13265 PF00392 Bacterial regulatory proteins, gntR family KM398_13270 PF00561 alpha/beta hydrolase fold KM398_13295 PF06081 Aromatic acid exporter family member 1 KM398_13310 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) KM398_13315 PF03413 Peptidase propeptide and YPEB domain KM398_13315 PF14620 YpeB sporulation KM398_13320 PF07486 Cell Wall Hydrolase KM398_13320 PF01471 Putative peptidoglycan binding domain KM398_13335 PF03301 Tryptophan 2,3-dioxygenase KM398_13340 PF04199 Putative cyclase KM398_13345 PF00266 Aminotransferase class-V KM398_13350 PF00440 Bacterial regulatory proteins, tetR family KM398_13350 PF08359 YsiA-like protein, C-terminal region KM398_13355 PF13344 Haloacid dehalogenase-like hydrolase KM398_13355 PF00293 NUDIX domain KM398_13380 PF02954 Bacterial regulatory protein, Fis family KM398_13380 PF01590 GAF domain KM398_13380 PF00158 Sigma-54 interaction domain KM398_13395 PF13302 Acetyltransferase (GNAT) domain KM398_13400 PF08220 DeoR-like helix-turn-helix domain KM398_13400 PF00455 DeoR C terminal sensor domain KM398_13415 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM398_13415 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM398_13415 PF00403 Heavy-metal-associated domain KM398_13420 PF02082 Transcriptional regulator KM398_13435 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM398_13435 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM398_13440 PF00364 Biotin-requiring enzyme KM398_13440 PF02817 e3 binding domain KM398_13440 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM398_13445 PF02779 Transketolase, pyrimidine binding domain KM398_13445 PF02780 Transketolase, C-terminal domain KM398_13450 PF00676 Dehydrogenase E1 component KM398_13460 PF00106 short chain dehydrogenase KM398_13465 PF13673 Acetyltransferase (GNAT) domain KM398_13465 PF04229 GrpB protein KM398_13495 PF00528 Binding-protein-dependent transport system inner membrane component KM398_13500 PF00005 ABC transporter KM398_13500 PF00571 CBS domain KM398_13505 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KM398_13510 PF00574 Clp protease KM398_13525 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KM398_13530 PF13673 Acetyltransferase (GNAT) domain KM398_13535 PF18416 N-acetylglucosamine binding protein domain 2 KM398_13535 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading KM398_13550 PF10990 Protein of unknown function (DUF2809) KM398_13575 PF00753 Metallo-beta-lactamase superfamily KM398_13575 PF03772 Competence protein KM398_13575 PF13567 Domain of unknown function (DUF4131) KM398_13625 PF13538 UvrD-like helicase C-terminal domain KM398_13640 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like KM398_13645 PF09382 RQC domain KM398_13645 PF16124 RecQ zinc-binding KM398_13645 PF00270 DEAD/DEAH box helicase KM398_13645 PF00271 Helicase conserved C-terminal domain KM398_13645 PF00570 HRDC domain KM398_13685 PF01368 DHH family KM398_13685 PF02833 DHHA2 domain KM398_13690 PF18416 N-acetylglucosamine binding protein domain 2 KM398_13690 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading KM398_13705 PF02627 Carboxymuconolactone decarboxylase family KM398_13710 PF01235 Sodium:alanine symporter family KM398_13715 PF00171 Aldehyde dehydrogenase family KM398_13720 PF00701 Dihydrodipicolinate synthetase family KM398_13725 PF05544 Proline racemase KM398_13730 PF05544 Proline racemase KM398_13735 PF01266 FAD dependent oxidoreductase KM398_13740 PF02954 Bacterial regulatory protein, Fis family KM398_13740 PF13188 PAS domain KM398_13740 PF00158 Sigma-54 interaction domain KM398_13755 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM398_13755 PF04324 BFD-like [2Fe-2S] binding domain KM398_13770 PF08876 Domain of unknown function (DUF1836) KM398_13775 PF09335 SNARE associated Golgi protein KM398_13790 PF04914 DltD protein KM398_13795 PF13302 Acetyltransferase (GNAT) domain KM398_13795 PF03352 Methyladenine glycosylase KM398_13795 PF00117 Glutamine amidotransferase class-I KM398_13795 PF00958 GMP synthase C terminal domain KM398_13795 PF13673 Acetyltransferase (GNAT) domain KM398_13800 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM398_13805 PF00877 NlpC/P60 family KM398_13805 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain KM398_13810 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KM398_13810 PF13378 Enolase C-terminal domain-like KM398_13830 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM398_13855 PF02129 X-Pro dipeptidyl-peptidase (S15 family) KM398_13855 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain KM398_13860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_13860 PF00512 His Kinase A (phospho-acceptor) domain KM398_13860 PF00989 PAS fold KM398_13860 PF16736 Single Cache-like KM398_13885 PF01048 Phosphorylase superfamily KM398_13895 PF03808 Glycosyl transferase WecB/TagA/CpsF family KM398_13900 PF08439 Oligopeptidase F KM398_13900 PF01432 Peptidase family M3 KM398_13915 PF02645 Uncharacterised protein, DegV family COG1307 KM398_13935 PF07690 Major Facilitator Superfamily KM398_13945 PF04519 Polymer-forming cytoskeletal KM398_13950 PF13171 Protein of unknown function (DUF4004) KM398_13955 PF12793 Sugar transport-related sRNA regulator N-term KM398_13955 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM398_13960 PF07690 Major Facilitator Superfamily KM398_13980 PF04226 Transglycosylase associated protein KM398_13985 PF01156 Inosine-uridine preferring nucleoside hydrolase KM398_13995 PF08241 Methyltransferase domain KM398_14030 PF00155 Aminotransferase class I and II KM398_14035 PF07977 FabA-like domain KM398_14040 PF03630 Fumble KM398_14060 PF00005 ABC transporter KM398_14105 PF01594 AI-2E family transporter KM398_14115 PF00296 Luciferase-like monooxygenase KM398_14120 PF00528 Binding-protein-dependent transport system inner membrane component KM398_14125 PF09084 NMT1/THI5 like KM398_14130 PF00005 ABC transporter KM398_14150 PF00293 NUDIX domain KM398_14150 PF09297 NADH pyrophosphatase zinc ribbon domain KM398_14170 PF02522 Aminoglycoside 3-N-acetyltransferase KM398_14195 PF13536 Putative multidrug resistance efflux transporter KM398_14200 PF12867 DinB superfamily KM398_14220 PF08713 DNA alkylation repair enzyme KM398_14230 PF01522 Polysaccharide deacetylase KM398_14240 PF03741 Integral membrane protein TerC family KM398_14245 PF00884 Sulfatase KM398_14250 PF00005 ABC transporter KM398_14250 PF12848 ABC transporter KM398_14260 PF03176 MMPL family KM398_14265 PF03176 MMPL family KM398_14270 PF03176 MMPL family KM398_14275 PF16295 Tetracyclin repressor-like, C-terminal domain KM398_14275 PF00440 Bacterial regulatory proteins, tetR family KM398_14285 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KM398_14290 PF02153 Prephenate dehydrogenase KM398_14290 PF01842 ACT domain KM398_14295 PF00155 Aminotransferase class I and II KM398_14300 PF01264 Chorismate synthase KM398_14305 PF01817 Chorismate mutase type II KM398_14305 PF00793 DAHP synthetase I family KM398_14325 PF01636 Phosphotransferase enzyme family KM398_14340 PF06725 3D domain KM398_14340 PF01476 LysM domain KM398_14350 PF04542 Sigma-70 region 2 KM398_14350 PF08281 Sigma-70, region 4 KM398_14370 PF06039 Malate:quinone oxidoreductase (Mqo) KM398_14375 PF13407 Periplasmic binding protein domain KM398_14380 PF02653 Branched-chain amino acid transport system / permease component KM398_14385 PF02653 Branched-chain amino acid transport system / permease component KM398_14390 PF00005 ABC transporter KM398_14395 PF04198 Putative sugar-binding domain KM398_14395 PF00325 Bacterial regulatory proteins, crp family KM398_14410 PF01791 DeoC/LacD family aldolase KM398_14430 PF03992 Antibiotic biosynthesis monooxygenase KM398_14450 PF07662 Na+ dependent nucleoside transporter C-terminus KM398_14450 PF01773 Na+ dependent nucleoside transporter N-terminus KM398_14455 PF00171 Aldehyde dehydrogenase family KM398_14460 PF00696 Amino acid kinase family KM398_14460 PF01472 PUA domain KM398_14465 PF03807 NADP oxidoreductase coenzyme F420-dependent KM398_14465 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM398_14470 PF01546 Peptidase family M20/M25/M40 KM398_14475 PF09339 IclR helix-turn-helix domain KM398_14475 PF01614 Bacterial transcriptional regulator KM398_14480 PF00324 Amino acid permease KM398_14485 PF01139 tRNA-splicing ligase RtcB KM398_14490 PF00487 Fatty acid desaturase KM398_14495 PF00245 Alkaline phosphatase KM398_14500 PF11188 Protein of unknown function (DUF2975) KM398_14505 PF13443 Cro/C1-type HTH DNA-binding domain KM398_14520 PF10086 YhfC intramembrane metalloprotease KM398_14530 PF00072 Response regulator receiver domain KM398_14530 PF04397 LytTr DNA-binding domain KM398_14540 PF13302 Acetyltransferase (GNAT) domain KM398_14545 PF12681 Glyoxalase-like domain KM398_14565 PF17863 AAA lid domain KM398_14565 PF07726 ATPase family associated with various cellular activities (AAA) KM398_14580 PF07690 Major Facilitator Superfamily KM398_14605 PF00535 Glycosyl transferase family 2 KM398_14615 PF00535 Glycosyl transferase family 2 KM398_14625 PF00202 Aminotransferase class-III KM398_14630 PF00199 Catalase KM398_14630 PF06628 Catalase-related immune-responsive KM398_14640 PF13382 Adenine deaminase C-terminal domain KM398_14640 PF01979 Amidohydrolase family KM398_14645 PF00144 Beta-lactamase KM398_14665 PF07726 ATPase family associated with various cellular activities (AAA) KM398_14665 PF17863 AAA lid domain KM398_14675 PF00881 Nitroreductase family KM398_14680 PF01047 MarR family KM398_14685 PF00679 Elongation factor G C-terminus KM398_14685 PF14492 Elongation Factor G, domain II KM398_14685 PF03764 Elongation factor G, domain IV KM398_14685 PF00009 Elongation factor Tu GTP binding domain KM398_14695 PF00293 NUDIX domain KM398_14710 PF00005 ABC transporter KM398_14715 PF00392 Bacterial regulatory proteins, gntR family KM398_14725 PF02687 FtsX-like permease family KM398_14725 PF00005 ABC transporter KM398_14725 PF12704 MacB-like periplasmic core domain KM398_14750 PF12833 Helix-turn-helix domain KM398_14755 PF00583 Acetyltransferase (GNAT) family KM398_14770 PF00892 EamA-like transporter family KM398_14775 PF00155 Aminotransferase class I and II KM398_14775 PF00392 Bacterial regulatory proteins, gntR family KM398_14780 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 KM398_14785 PF13031 Protein of unknown function (DUF3892) KM398_14795 PF00512 His Kinase A (phospho-acceptor) domain KM398_14795 PF00672 HAMP domain KM398_14800 PF00486 Transcriptional regulatory protein, C terminal KM398_14800 PF00072 Response regulator receiver domain KM398_14805 PF00561 alpha/beta hydrolase fold KM398_14835 PF01925 Sulfite exporter TauE/SafE KM398_14840 PF13302 Acetyltransferase (GNAT) domain KM398_14845 PF00324 Amino acid permease KM398_14855 PF08713 DNA alkylation repair enzyme KM398_14860 PF10898 Protein of unknown function (DUF2716) KM398_14880 PF00293 NUDIX domain KM398_14890 PF10502 Signal peptidase, peptidase S26 KM398_14895 PF00905 Penicillin binding protein transpeptidase domain KM398_14895 PF03717 Penicillin-binding Protein dimerisation domain KM398_14905 PF02146 Sir2 family KM398_14910 PF01470 Pyroglutamyl peptidase KM398_14930 PF03746 LamB/YcsF family KM398_14935 PF02626 Carboxyltransferase domain, subdomain A and B KM398_14940 PF02682 Carboxyltransferase domain, subdomain C and D KM398_14945 PF09339 IclR helix-turn-helix domain KM398_14945 PF01614 Bacterial transcriptional regulator KM398_14950 PF10502 Signal peptidase, peptidase S26 KM398_14955 PF03932 CutC family KM398_14960 PF07454 Stage II sporulation protein P (SpoIIP) KM398_14975 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KM398_14975 PF02770 Acyl-CoA dehydrogenase, middle domain KM398_14975 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM398_14995 PF07670 Nucleoside recognition KM398_15010 PF02915 Rubrerythrin KM398_15020 PF00440 Bacterial regulatory proteins, tetR family KM398_15025 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KM398_15025 PF00391 PEP-utilising enzyme, mobile domain KM398_15030 PF00753 Metallo-beta-lactamase superfamily KM398_15045 PF07875 Coat F domain KM398_15050 PF08892 YqcI/YcgG family KM398_15055 PF01810 LysE type translocator KM398_15070 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM398_15075 PF10710 Protein of unknown function (DUF2512) KM398_15080 PF11553 Protein of unknown function (DUF3231) KM398_15085 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM398_15090 PF08240 Alcohol dehydrogenase GroES-like domain KM398_15090 PF13823 Alcohol dehydrogenase GroES-associated KM398_15090 PF00107 Zinc-binding dehydrogenase KM398_15105 PF10415 Fumarase C C-terminus KM398_15105 PF00206 Lyase KM398_15110 PF00710 Asparaginase, N-terminal KM398_15110 PF17763 Glutaminase/Asparaginase C-terminal domain KM398_15115 PF01381 Helix-turn-helix KM398_15125 PF08459 UvrC Helix-hairpin-helix N-terminal KM398_15125 PF02151 UvrB/uvrC motif KM398_15125 PF12826 Helix-hairpin-helix motif KM398_15125 PF01541 GIY-YIG catalytic domain KM398_15130 PF13520 Amino acid permease KM398_15135 PF05525 Branched-chain amino acid transport protein KM398_15140 PF03807 NADP oxidoreductase coenzyme F420-dependent KM398_15140 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM398_15145 PF13564 DoxX-like family KM398_15150 PF00390 Malic enzyme, N-terminal domain KM398_15150 PF03949 Malic enzyme, NAD binding domain KM398_15165 PF03845 Spore germination protein KM398_15175 PF08664 YcbB domain KM398_15175 PF00072 Response regulator receiver domain KM398_15185 PF04960 Glutaminase KM398_15190 PF01235 Sodium:alanine symporter family KM398_15220 PF00149 Calcineurin-like phosphoesterase KM398_15220 PF02872 5'-nucleotidase, C-terminal domain KM398_15220 PF17936 Bacterial Ig domain KM398_15225 PF00199 Catalase KM398_15225 PF06628 Catalase-related immune-responsive KM398_15230 PF00561 alpha/beta hydrolase fold KM398_15235 PF00857 Isochorismatase family KM398_15255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM398_15255 PF03466 LysR substrate binding domain KM398_15260 PF01047 MarR family KM398_15280 PF11181 Heat induced stress protein YflT KM398_15295 PF03073 TspO/MBR family KM398_15300 PF03441 FAD binding domain of DNA photolyase KM398_15300 PF00875 DNA photolyase KM398_15310 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) KM398_15315 PF00361 Proton-conducting membrane transporter KM398_15315 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KM398_15320 PF10057 Uncharacterized conserved protein (DUF2294) KM398_15335 PF01040 UbiA prenyltransferase family KM398_15340 PF00561 alpha/beta hydrolase fold KM398_15345 PF01297 Zinc-uptake complex component A periplasmic KM398_15350 PF00950 ABC 3 transport family KM398_15355 PF00005 ABC transporter KM398_15380 PF01451 Low molecular weight phosphotyrosine protein phosphatase KM398_15385 PF01758 Sodium Bile acid symporter family KM398_15390 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM398_15395 PF01022 Bacterial regulatory protein, arsR family KM398_15410 PF00012 Hsp70 protein KM398_15425 PF01037 Lrp/AsnC ligand binding domain KM398_15440 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM398_15465 PF12833 Helix-turn-helix domain KM398_15465 PF02805 Metal binding domain of Ada KM398_15475 PF00144 Beta-lactamase KM398_15500 PF12802 MarR family KM398_15505 PF00067 Cytochrome P450 KM398_15505 PF00175 Oxidoreductase NAD-binding domain KM398_15505 PF00258 Flavodoxin KM398_15505 PF00667 FAD binding domain KM398_15510 PF07690 Major Facilitator Superfamily KM398_15535 PF00072 Response regulator receiver domain KM398_15535 PF00486 Transcriptional regulatory protein, C terminal KM398_15540 PF00672 HAMP domain KM398_15540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_15540 PF00512 His Kinase A (phospho-acceptor) domain KM398_15565 PF00291 Pyridoxal-phosphate dependent enzyme KM398_15585 PF01381 Helix-turn-helix KM398_15600 PF00753 Metallo-beta-lactamase superfamily KM398_15605 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family KM398_15615 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM398_15615 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM398_15620 PF04072 Leucine carboxyl methyltransferase KM398_15635 PF00005 ABC transporter KM398_15640 PF02687 FtsX-like permease family KM398_15655 PF00672 HAMP domain KM398_15655 PF00512 His Kinase A (phospho-acceptor) domain KM398_15655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_15660 PF00072 Response regulator receiver domain KM398_15660 PF00486 Transcriptional regulatory protein, C terminal KM398_15670 PF01047 MarR family KM398_15680 PF04299 Putative FMN-binding domain KM398_15685 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM398_15685 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM398_15690 PF07690 Major Facilitator Superfamily KM398_15695 PF02589 LUD domain KM398_15700 PF11870 Domain of unknown function (DUF3390) KM398_15700 PF13183 4Fe-4S dicluster domain KM398_15700 PF02589 LUD domain KM398_15705 PF02754 Cysteine-rich domain KM398_15710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM398_15710 PF03466 LysR substrate binding domain KM398_15720 PF02016 LD-carboxypeptidase N-terminal domain KM398_15720 PF17676 LD-carboxypeptidase C-terminal domain KM398_15745 PF07690 Major Facilitator Superfamily KM398_15750 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM398_15750 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KM398_15755 PF05116 Sucrose-6F-phosphate phosphohydrolase KM398_15765 PF00356 Bacterial regulatory proteins, lacI family KM398_15770 PF18801 response regulator aspartate phosphatase H, N terminal KM398_15790 PF00817 impB/mucB/samB family KM398_15790 PF11798 IMS family HHH motif KM398_15790 PF11799 impB/mucB/samB family C-terminal domain KM398_15805 PF00672 HAMP domain KM398_15805 PF02743 Cache domain KM398_15805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM398_15820 PF01554 MatE KM398_15830 PF08453 Peptidase family M9 N-terminal KM398_15830 PF01752 Collagenase KM398_15830 PF18496 Collagenase G catalytic helper subdomain KM398_15840 PF07690 Major Facilitator Superfamily KM398_15845 PF00440 Bacterial regulatory proteins, tetR family KM398_15845 PF16859 Tetracyclin repressor-like, C-terminal domain KM398_15855 PF01022 Bacterial regulatory protein, arsR family KM398_15865 PF03313 Serine dehydratase alpha chain KM398_15870 PF01842 ACT domain KM398_15870 PF03315 Serine dehydratase beta chain KM398_15880 PF00202 Aminotransferase class-III KM398_15885 PF00708 Acylphosphatase KM398_15885 PF17788 HypF Kae1-like domain KM398_15885 PF01300 Telomere recombination KM398_15885 PF07503 HypF finger KM398_15890 PF00586 AIR synthase related protein, N-terminal domain KM398_15890 PF02769 AIR synthase related protein, C-terminal domain KM398_15895 PF00857 Isochorismatase family KM398_15900 PF01037 Lrp/AsnC ligand binding domain KM398_15905 PF13520 Amino acid permease KM398_15920 PF01842 ACT domain KM398_15920 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KM398_15920 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KM398_15925 PF00266 Aminotransferase class-V KM398_15940 PF04542 Sigma-70 region 2 KM398_15940 PF08281 Sigma-70, region 4 KM398_15955 PF07883 Cupin domain KM398_15960 PF12833 Helix-turn-helix domain KM398_15960 PF01497 Periplasmic binding protein KM398_15965 PF01804 Penicillin amidase KM398_16005 PF14044 NETI protein KM398_16010 PF07690 Major Facilitator Superfamily KM398_16015 PF12697 Alpha/beta hydrolase family KM398_16020 PF01047 MarR family KM398_16025 PF07690 Major Facilitator Superfamily KM398_16035 PF12679 ABC-2 family transporter protein KM398_16040 PF13732 Domain of unknown function (DUF4162) KM398_16040 PF00005 ABC transporter KM398_16045 PF13396 Phospholipase_D-nuclease N-terminal KM398_16055 PF17314 Family of unknown function (DUF5360) KM398_16060 PF00893 Small Multidrug Resistance protein KM398_16065 PF00440 Bacterial regulatory proteins, tetR family KM398_16070 PF17440 Thiol-activated cytolysin beta sandwich domain KM398_16070 PF01289 Thiol-activated cytolysin KM398_16075 PF02667 Short chain fatty acid transporter KM398_16085 PF02525 Flavodoxin-like fold KM398_16105 PF14256 YwiC-like protein KM398_16115 PF00005 ABC transporter KM398_16120 PF02361 Cobalt transport protein KM398_16135 PF03737 Aldolase/RraA KM398_16140 PF03606 C4-dicarboxylate anaerobic carrier KM398_16145 PF04231 Endonuclease I KM398_16160 PF01381 Helix-turn-helix KM398_16165 PF02660 Glycerol-3-phosphate acyltransferase KM398_16170 PF04073 Aminoacyl-tRNA editing domain KM398_16175 PF03129 Anticodon binding domain KM398_16175 PF13393 Histidyl-tRNA synthetase KM398_16190 PF01638 HxlR-like helix-turn-helix KM398_16195 PF00881 Nitroreductase family KM398_16205 PF02887 Pyruvate kinase, alpha/beta domain KM398_16205 PF00391 PEP-utilising enzyme, mobile domain KM398_16205 PF00224 Pyruvate kinase, barrel domain KM398_16225 PF00005 ABC transporter KM398_16250 PF13419 Haloacid dehalogenase-like hydrolase KM398_16260 PF13350 Tyrosine phosphatase family KM398_16285 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM398_16290 PF00480 ROK family KM398_16295 PF07690 Major Facilitator Superfamily KM398_16300 PF12464 Maltose acetyltransferase KM398_16300 PF14602 Hexapeptide repeat of succinyl-transferase KM398_16310 PF00005 ABC transporter KM398_16310 PF12704 MacB-like periplasmic core domain KM398_16310 PF02687 FtsX-like permease family KM398_16320 PF00579 tRNA synthetases class I (W and Y) KM398_16325 PF13288 DXP reductoisomerase C-terminal domain KM398_16325 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KM398_16325 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KM398_16330 PF01594 AI-2E family transporter KM398_16350 PF08241 Methyltransferase domain KM398_16360 PF07690 Major Facilitator Superfamily KM398_16380 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM398_16390 PF01595 Cyclin M transmembrane N-terminal domain KM398_16390 PF00571 CBS domain KM398_16390 PF03471 Transporter associated domain KM398_16395 PF13411 MerR HTH family regulatory protein KM398_16400 PF00892 EamA-like transporter family KM398_16405 PF00805 Pentapeptide repeats (8 copies) KM398_16410 PF06906 Protein of unknown function (DUF1272) KM398_16415 PF10282 Lactonase, 7-bladed beta-propeller KM398_16420 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM398_16420 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM398_16425 PF02447 GntP family permease KM398_16430 PF00923 Transaldolase/Fructose-6-phosphate aldolase KM398_16435 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM398_16435 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain KM398_16440 PF02779 Transketolase, pyrimidine binding domain KM398_16440 PF00456 Transketolase, thiamine diphosphate binding domain KM398_16440 PF02780 Transketolase, C-terminal domain KM398_16445 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KM398_16445 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KM398_16450 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KM398_16450 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KM398_16455 PF00107 Zinc-binding dehydrogenase KM398_16455 PF08240 Alcohol dehydrogenase GroES-like domain KM398_16460 PF00296 Luciferase-like monooxygenase KM398_16470 PF00109 Beta-ketoacyl synthase, N-terminal domain KM398_16470 PF02801 Beta-ketoacyl synthase, C-terminal domain KM398_16470 PF08659 KR domain KM398_16470 PF16197 Ketoacyl-synthetase C-terminal extension KM398_16470 PF00550 Phosphopantetheine attachment site KM398_16470 PF08240 Alcohol dehydrogenase GroES-like domain KM398_16470 PF14765 Polyketide synthase dehydratase KM398_16470 PF00698 Acyl transferase domain KM398_16475 PF00106 short chain dehydrogenase KM398_16480 PF01447 Thermolysin metallopeptidase, catalytic domain KM398_16480 PF03413 Peptidase propeptide and YPEB domain KM398_16480 PF07504 Fungalysin/Thermolysin Propeptide Motif KM398_16480 PF02868 Thermolysin metallopeptidase, alpha-helical domain KM398_16500 PF00248 Aldo/keto reductase family KM398_16505 PF07690 Major Facilitator Superfamily KM398_16515 PF03928 Haem-degrading KM398_16520 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM398_16550 PF03960 ArsC family KM398_16555 PF01638 HxlR-like helix-turn-helix KM398_16560 PF07702 UTRA domain KM398_16560 PF00392 Bacterial regulatory proteins, gntR family KM398_16575 PF01638 HxlR-like helix-turn-helix KM398_16580 PF01638 HxlR-like helix-turn-helix KM398_16585 PF00248 Aldo/keto reductase family KM398_16615 PF02567 Phenazine biosynthesis-like protein KM398_16635 PF13193 AMP-binding enzyme C-terminal domain KM398_16635 PF00501 AMP-binding enzyme KM398_16645 PF01638 HxlR-like helix-turn-helix KM398_16665 PF01022 Bacterial regulatory protein, arsR family KM398_16675 PF12791 Anti-sigma factor N-terminus KM398_16680 PF04542 Sigma-70 region 2 KM398_16695 PF00440 Bacterial regulatory proteins, tetR family KM398_16715 PF05656 Protein of unknown function (DUF805) KM398_16720 PF01061 ABC-2 type transporter KM398_16725 PF00005 ABC transporter KM398_16725 PF13732 Domain of unknown function (DUF4162) KM398_16740 PF03063 Prismane/CO dehydrogenase family KM398_16750 PF00753 Metallo-beta-lactamase superfamily KM398_16755 PF01471 Putative peptidoglycan binding domain KM398_16755 PF01183 Glycosyl hydrolases family 25 KM398_16780 PF00144 Beta-lactamase KM398_16820 PF00753 Metallo-beta-lactamase superfamily KM398_16825 PF08240 Alcohol dehydrogenase GroES-like domain KM398_16825 PF00107 Zinc-binding dehydrogenase KM398_16830 PF00324 Amino acid permease KM398_16835 PF07690 Major Facilitator Superfamily KM398_16860 PF02585 GlcNAc-PI de-N-acetylase KM398_16865 PF08830 Protein of unknown function (DUF1806) KM398_16870 PF03600 Citrate transporter KM398_16890 PF01497 Periplasmic binding protein KM398_16895 PF01032 FecCD transport family KM398_16900 PF01032 FecCD transport family KM398_16905 PF05675 Protein of unknown function (DUF817) KM398_16910 PF02567 Phenazine biosynthesis-like protein KM398_16915 PF13170 Protein of unknown function (DUF4003) KM398_16930 PF10901 Protein of unknown function (DUF2690) KM398_16940 PF03466 LysR substrate binding domain KM398_16940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM398_16945 PF08240 Alcohol dehydrogenase GroES-like domain KM398_16945 PF00107 Zinc-binding dehydrogenase KM398_16960 PF01713 Smr domain KM398_16960 PF00488 MutS domain V KM398_16970 PF09154 Domain of unknown function (DUF1939) KM398_16970 PF00128 Alpha amylase, catalytic domain KM398_16985 PF00144 Beta-lactamase KM398_16995 PF07690 Major Facilitator Superfamily KM398_17000 PF03466 LysR substrate binding domain KM398_17000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM398_17015 PF03009 Glycerophosphoryl diester phosphodiesterase family KM398_17035 PF01494 FAD binding domain KM398_17040 PF01022 Bacterial regulatory protein, arsR family KM398_17045 PF00107 Zinc-binding dehydrogenase KM398_17045 PF08240 Alcohol dehydrogenase GroES-like domain KM398_17050 PF02696 Uncharacterized ACR, YdiU/UPF0061 family KM398_17065 PF04299 Putative FMN-binding domain KM398_17070 PF04229 GrpB protein KM398_17080 PF01758 Sodium Bile acid symporter family KM398_17085 PF02913 FAD linked oxidases, C-terminal domain KM398_17085 PF01565 FAD binding domain KM398_17105 PF00132 Bacterial transferase hexapeptide (six repeats) KM398_17110 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KM398_17115 PF00535 Glycosyl transferase family 2 KM398_17120 PF00378 Enoyl-CoA hydratase/isomerase KM398_17125 PF01752 Collagenase KM398_17125 PF18496 Collagenase G catalytic helper subdomain KM398_17125 PF08453 Peptidase family M9 N-terminal KM398_17130 PF02308 MgtC family KM398_17145 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM398_17150 PF04294 VanW like protein KM398_17160 PF13037 Domain of unknown function (DUF3898) KM398_17160 PF13039 Protein of unknown function (DUF3900) KM398_17180 PF00313 'Cold-shock' DNA-binding domain KM398_17190 PF00258 Flavodoxin KM398_17200 PF00293 NUDIX domain KM398_17210 PF00132 Bacterial transferase hexapeptide (six repeats) KM398_17220 PF00106 short chain dehydrogenase KM398_17230 PF14698 Argininosuccinate lyase C-terminal KM398_17230 PF00206 Lyase KM398_17240 PF01156 Inosine-uridine preferring nucleoside hydrolase KM398_17245 PF00474 Sodium:solute symporter family KM398_17255 PF00171 Aldehyde dehydrogenase family KM398_17265 PF14151 YfhD-like protein KM398_17270 PF13249 Squalene-hopene cyclase N-terminal domain KM398_17270 PF13243 Squalene-hopene cyclase C-terminal domain KM398_17275 PF02681 Divergent PAP2 family KM398_17280 PF00892 EamA-like transporter family KM398_17285 PF06961 Protein of unknown function (DUF1294) KM398_17300 PF10609 NUBPL iron-transfer P-loop NTPase KM398_17310 PF02391 MoaE protein KM398_17315 PF03453 MoeA N-terminal region (domain I and II) KM398_17315 PF00994 Probable molybdopterin binding domain KM398_17315 PF03454 MoeA C-terminal region (domain IV) KM398_17320 PF00899 ThiF family KM398_17325 PF01226 Formate/nitrite transporter KM398_17330 PF04055 Radical SAM superfamily KM398_17330 PF06463 Molybdenum Cofactor Synthesis C KM398_17335 PF02634 FdhD/NarQ family KM398_17340 PF10057 Uncharacterized conserved protein (DUF2294) KM398_17345 PF07849 Protein of unknown function (DUF1641) KM398_17350 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KM398_17350 PF01568 Molydopterin dinucleotide binding domain KM398_17350 PF00037 4Fe-4S binding domain KM398_17350 PF00384 Molybdopterin oxidoreductase KM398_17350 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KM398_17355 PF03323 Bacillus/Clostridium GerA spore germination protein KM398_17395 PF08241 Methyltransferase domain KM398_17400 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM398_17405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM398_17410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM398_17415 PF00375 Sodium:dicarboxylate symporter family KM398_17420 PF03816 Cell envelope-related transcriptional attenuator domain KM398_17430 PF08281 Sigma-70, region 4 KM398_17430 PF04542 Sigma-70 region 2 KM398_17450 PF00005 ABC transporter KM398_17450 PF13732 Domain of unknown function (DUF4162) KM398_17460 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM398_17460 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KM398_17465 PF03989 DNA gyrase C-terminal domain, beta-propeller KM398_17465 PF00521 DNA gyrase/topoisomerase IV, subunit A KM398_17470 PF00204 DNA gyrase B KM398_17470 PF00986 DNA gyrase B subunit, carboxyl terminus KM398_17470 PF01751 Toprim domain KM398_17470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_17475 PF13380 CoA binding domain KM398_17480 PF13180 PDZ domain KM398_17485 PF00072 Response regulator receiver domain KM398_17485 PF00486 Transcriptional regulatory protein, C terminal KM398_17495 PF03477 ATP cone domain KM398_17495 PF13597 Anaerobic ribonucleoside-triphosphate reductase KM398_17500 PF02660 Glycerol-3-phosphate acyltransferase KM398_17505 PF01521 Iron-sulphur cluster biosynthesis KM398_17510 PF03061 Thioesterase superfamily KM398_17515 PF01476 LysM domain KM398_17515 PF00704 Glycosyl hydrolases family 18 KM398_17525 PF08177 Small acid-soluble spore protein N family KM398_17530 PF13040 Fur-regulated basic protein B KM398_17535 PF02811 PHP domain KM398_17535 PF14579 Helix-hairpin-helix motif KM398_17535 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KM398_17535 PF07733 Bacterial DNA polymerase III alpha NTPase domain KM398_17535 PF01336 OB-fold nucleic acid binding domain KM398_17535 PF00929 Exonuclease KM398_17535 PF11490 DNA polymerase III polC-type N-terminus II KM398_17540 PF00578 AhpC/TSA family KM398_17550 PF00005 ABC transporter KM398_17550 PF00664 ABC transporter transmembrane region KM398_17550 PF03412 Peptidase C39 family KM398_17555 PF00330 Aconitase family (aconitate hydratase) KM398_17555 PF00694 Aconitase C-terminal domain KM398_17565 PF01522 Polysaccharide deacetylase KM398_17595 PF01411 tRNA synthetases class II (A) KM398_17595 PF02272 DHHA1 domain KM398_17595 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM398_17600 PF13344 Haloacid dehalogenase-like hydrolase KM398_17600 PF00293 NUDIX domain KM398_17610 PF02803 Thiolase, C-terminal domain KM398_17610 PF00108 Thiolase, N-terminal domain KM398_17615 PF00501 AMP-binding enzyme KM398_17615 PF13193 AMP-binding enzyme C-terminal domain KM398_17620 PF02632 BioY family KM398_17625 PF00501 AMP-binding enzyme KM398_17625 PF13193 AMP-binding enzyme C-terminal domain KM398_17645 PF05532 CsbD-like KM398_17675 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM398_17675 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM398_17685 PF00512 His Kinase A (phospho-acceptor) domain KM398_17685 PF13426 PAS domain KM398_17685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_17685 PF00989 PAS fold KM398_17685 PF13188 PAS domain KM398_17690 PF01738 Dienelactone hydrolase family KM398_17695 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM398_17700 PF00474 Sodium:solute symporter family KM398_17705 PF01645 Conserved region in glutamate synthase KM398_17710 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KM398_17715 PF02559 CarD-like/TRCF domain KM398_17720 PF00491 Arginase family KM398_17725 PF01979 Amidohydrolase family KM398_17730 PF17392 Urocanase C-terminal domain KM398_17730 PF17391 Urocanase N-terminal domain KM398_17730 PF01175 Urocanase Rossmann-like domain KM398_17735 PF00221 Aromatic amino acid lyase KM398_17740 PF09021 HutP KM398_17745 PF01209 ubiE/COQ5 methyltransferase family KM398_17765 PF11084 Protein of unknown function (DUF2621) KM398_17800 PF07301 Protein of unknown function (DUF1453) KM398_17805 PF02683 Cytochrome C biogenesis protein transmembrane region KM398_17815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM398_17815 PF03466 LysR substrate binding domain KM398_17820 PF03788 LrgA family KM398_17825 PF04172 LrgB-like family KM398_17830 PF13344 Haloacid dehalogenase-like hydrolase KM398_17830 PF00293 NUDIX domain KM398_17850 PF01510 N-acetylmuramoyl-L-alanine amidase KM398_17850 PF01471 Putative peptidoglycan binding domain KM398_17865 PF00664 ABC transporter transmembrane region KM398_17865 PF00005 ABC transporter KM398_17870 PF00005 ABC transporter KM398_17870 PF00664 ABC transporter transmembrane region KM398_17875 PF03672 Uncharacterised protein family (UPF0154) KM398_17880 PF10747 Sporulation inhibitor of replication protein SirA KM398_17885 PF02780 Transketolase, C-terminal domain KM398_17885 PF00456 Transketolase, thiamine diphosphate binding domain KM398_17885 PF02779 Transketolase, pyrimidine binding domain KM398_17890 PF01385 Probable transposase KM398_17890 PF07282 Putative transposase DNA-binding domain KM398_17890 PF12323 Helix-turn-helix domain KM398_17895 PF00528 Binding-protein-dependent transport system inner membrane component KM398_17900 PF00528 Binding-protein-dependent transport system inner membrane component KM398_17905 PF00005 ABC transporter KM398_17920 PF05979 Bacterial protein of unknown function (DUF896) KM398_17925 PF00239 Resolvase, N terminal domain KM398_17930 PF00717 Peptidase S24-like KM398_17930 PF01726 LexA DNA binding domain KM398_17945 PF03551 Transcriptional regulator PadR-like family KM398_17985 PF01476 LysM domain KM398_17985 PF01510 N-acetylmuramoyl-L-alanine amidase KM398_17985 PF01471 Putative peptidoglycan binding domain KM398_17990 PF05105 Bacteriophage holin family KM398_18145 PF08281 Sigma-70, region 4 KM398_18190 PF02511 Thymidylate synthase complementing protein KM398_18195 PF00145 C-5 cytosine-specific DNA methylase KM398_18275 PF01381 Helix-turn-helix KM398_18295 PF02899 Phage integrase, N-terminal SAM-like domain KM398_18295 PF00589 Phage integrase family KM398_18300 PF00120 Glutamine synthetase, catalytic domain KM398_18300 PF03951 Glutamine synthetase, beta-Grasp domain KM398_18305 PF13411 MerR HTH family regulatory protein KM398_18310 PF06838 Methionine gamma-lyase KM398_18320 PF03458 UPF0126 domain KM398_18330 PF00004 ATPase family associated with various cellular activities (AAA) KM398_18330 PF17866 AAA lid domain KM398_18345 PF17209 Hfq protein KM398_18360 PF06725 3D domain KM398_18360 PF01476 LysM domain KM398_18365 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KM398_18365 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KM398_18370 PF00294 pfkB family carbohydrate kinase KM398_18375 PF00455 DeoR C terminal sensor domain KM398_18375 PF08220 DeoR-like helix-turn-helix domain KM398_18385 PF04238 Protein of unknown function (DUF420) KM398_18395 PF00324 Amino acid permease KM398_18400 PF00041 Fibronectin type III domain KM398_18400 PF00704 Glycosyl hydrolases family 18 KM398_18410 PF00149 Calcineurin-like phosphoesterase KM398_18410 PF10518 TAT (twin-arginine translocation) pathway signal sequence KM398_18415 PF01226 Formate/nitrite transporter KM398_18420 PF00216 Bacterial DNA-binding protein KM398_18430 PF00403 Heavy-metal-associated domain KM398_18435 PF02583 Metal-sensitive transcriptional repressor KM398_18445 PF00756 Putative esterase KM398_18450 PF00005 ABC transporter KM398_18455 PF01032 FecCD transport family KM398_18460 PF01032 FecCD transport family KM398_18470 PF03372 Endonuclease/Exonuclease/phosphatase family KM398_18475 PF12833 Helix-turn-helix domain KM398_18475 PF02805 Metal binding domain of Ada KM398_18480 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KM398_18480 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KM398_18485 PF00730 HhH-GPD superfamily base excision DNA repair protein KM398_18485 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain KM398_18490 PF07687 Peptidase dimerisation domain KM398_18490 PF01546 Peptidase family M20/M25/M40 KM398_18510 PF00561 alpha/beta hydrolase fold KM398_18515 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM398_18520 PF00563 EAL domain KM398_18520 PF00990 Diguanylate cyclase, GGDEF domain KM398_18520 PF03707 Bacterial signalling protein N terminal repeat KM398_18530 PF10787 Uncharacterised protein from bacillus cereus group KM398_18535 PF04172 LrgB-like family KM398_18540 PF03788 LrgA family KM398_18545 PF00155 Aminotransferase class I and II KM398_18545 PF00392 Bacterial regulatory proteins, gntR family KM398_18550 PF00561 alpha/beta hydrolase fold KM398_18550 PF00364 Biotin-requiring enzyme KM398_18555 PF02585 GlcNAc-PI de-N-acetylase KM398_18570 PF00388 Phosphatidylinositol-specific phospholipase C, X domain KM398_18575 PF00082 Subtilase family KM398_18580 PF07486 Cell Wall Hydrolase KM398_18585 PF03275 UDP-galactopyranose mutase KM398_18590 PF00884 Sulfatase KM398_18595 PF00350 Dynamin family KM398_18605 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family KM398_18610 PF00512 His Kinase A (phospho-acceptor) domain KM398_18610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_18615 PF00486 Transcriptional regulatory protein, C terminal KM398_18615 PF00072 Response regulator receiver domain KM398_18630 PF00005 ABC transporter KM398_18635 PF01119 DNA mismatch repair protein, C-terminal domain KM398_18635 PF08676 MutL C terminal dimerisation domain KM398_18640 PF05188 MutS domain II KM398_18640 PF01624 MutS domain I KM398_18640 PF05190 MutS family domain IV KM398_18640 PF05192 MutS domain III KM398_18640 PF00488 MutS domain V KM398_18645 PF10628 Outer spore coat protein E (CotE) KM398_18650 PF06133 Control of competence regulator ComK, YlbF/YmcA KM398_18655 PF04055 Radical SAM superfamily KM398_18655 PF01938 TRAM domain KM398_18655 PF00919 Uncharacterized protein family UPF0004 KM398_18660 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM398_18665 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg KM398_18665 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase KM398_18665 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II KM398_18670 PF01244 Membrane dipeptidase (Peptidase family M19) KM398_18675 PF04232 Stage V sporulation protein S (SpoVS) KM398_18680 PF13277 YmdB-like protein KM398_18685 PF12072 Domain of unknown function (DUF3552) KM398_18685 PF01966 HD domain KM398_18685 PF00013 KH domain KM398_18690 PF00154 recA bacterial DNA recombination protein KM398_18700 PF02464 Competence-damaged protein KM398_18700 PF00994 Probable molybdopterin binding domain KM398_18700 PF18146 Damage-inducible protein CinA KH domain KM398_18705 PF01066 CDP-alcohol phosphatidyltransferase KM398_18710 PF13464 Domain of unknown function (DUF4115) KM398_18715 PF11868 Protein of unknown function (DUF3388) KM398_18720 PF11588 Protein of unknown function (DUF3243) KM398_18730 PF00675 Insulinase (Peptidase family M16) KM398_18730 PF05193 Peptidase M16 inactive domain KM398_18735 PF05193 Peptidase M16 inactive domain KM398_18740 PF02653 Branched-chain amino acid transport system / permease component KM398_18750 PF00005 ABC transporter KM398_18755 PF02608 ABC transporter substrate-binding protein PnrA-like KM398_18760 PF00392 Bacterial regulatory proteins, gntR family KM398_18760 PF07702 UTRA domain KM398_18765 PF17854 FtsK alpha domain KM398_18765 PF09397 Ftsk gamma domain KM398_18765 PF01580 FtsK/SpoIIIE family KM398_18770 PF14035 YlzJ-like protein KM398_18775 PF00574 Clp protease KM398_18780 PF00753 Metallo-beta-lactamase superfamily KM398_18780 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KM398_18780 PF17770 Ribonuclease J C-terminal domain KM398_18785 PF00701 Dihydrodipicolinate synthetase family KM398_18790 PF13840 ACT domain KM398_18790 PF00696 Amino acid kinase family KM398_18795 PF02774 Semialdehyde dehydrogenase, dimerisation domain KM398_18795 PF01118 Semialdehyde dehydrogenase, NAD binding domain KM398_18800 PF02441 Flavoprotein KM398_18805 PF16924 Dipicolinate synthase subunit A N-terminal domain KM398_18805 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KM398_18810 PF05239 PRC-barrel domain KM398_18815 PF00675 Insulinase (Peptidase family M16) KM398_18815 PF05193 Peptidase M16 inactive domain KM398_18820 PF01522 Polysaccharide deacetylase KM398_18825 PF00575 S1 RNA binding domain KM398_18825 PF03725 3' exoribonuclease family, domain 2 KM398_18825 PF01138 3' exoribonuclease family, domain 1 KM398_18825 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KM398_18825 PF00013 KH domain KM398_18830 PF00312 Ribosomal protein S15 KM398_18835 PF01687 Riboflavin kinase KM398_18835 PF06574 FAD synthetase KM398_18840 PF01509 TruB family pseudouridylate synthase (N terminal domain) KM398_18840 PF16198 tRNA pseudouridylate synthase B C-terminal domain KM398_18845 PF02033 Ribosome-binding factor A KM398_18850 PF04456 Protein of unknown function (DUF503) KM398_18855 PF00009 Elongation factor Tu GTP binding domain KM398_18855 PF11987 Translation-initiation factor 2 KM398_18855 PF04760 Translation initiation factor IF-2, N-terminal region KM398_18860 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family KM398_18865 PF04296 Protein of unknown function (DUF448) KM398_18870 PF13184 NusA-like KH domain KM398_18870 PF08529 NusA N-terminal domain KM398_18870 PF00575 S1 RNA binding domain KM398_18875 PF02576 RimP N-terminal domain KM398_18875 PF17384 RimP C-terminal SH3 domain KM398_18880 PF02811 PHP domain KM398_18880 PF11490 DNA polymerase III polC-type N-terminus II KM398_18880 PF07733 Bacterial DNA polymerase III alpha NTPase domain KM398_18880 PF14579 Helix-hairpin-helix motif KM398_18880 PF14480 DNA polymerase III polC-type N-terminus I KM398_18880 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KM398_18880 PF00929 Exonuclease KM398_18885 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM398_18885 PF04073 Aminoacyl-tRNA editing domain KM398_18885 PF03129 Anticodon binding domain KM398_18890 PF02163 Peptidase family M50 KM398_18890 PF17820 PDZ domain KM398_18895 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KM398_18895 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KM398_18895 PF13288 DXP reductoisomerase C-terminal domain KM398_18905 PF01255 Putative undecaprenyl diphosphate synthase KM398_18910 PF01765 Ribosome recycling factor KM398_18915 PF00696 Amino acid kinase family KM398_18920 PF00889 Elongation factor TS KM398_18925 PF00318 Ribosomal protein S2 KM398_18930 PF08222 CodY helix-turn-helix domain KM398_18930 PF06018 CodY GAF-like domain KM398_18935 PF10431 C-terminal, D2-small domain, of ClpB protein KM398_18935 PF07724 AAA domain (Cdc48 subfamily) KM398_18935 PF00004 ATPase family associated with various cellular activities (AAA) KM398_18940 PF00227 Proteasome subunit KM398_18945 PF00589 Phage integrase family KM398_18945 PF02899 Phage integrase, N-terminal SAM-like domain KM398_18950 PF01134 Glucose inhibited division protein A KM398_18955 PF01396 Topoisomerase DNA binding C4 zinc finger KM398_18955 PF01751 Toprim domain KM398_18955 PF01131 DNA topoisomerase KM398_18965 PF00549 CoA-ligase KM398_18965 PF02629 CoA binding domain KM398_18970 PF00549 CoA-ligase KM398_18970 PF08442 ATP-grasp domain KM398_18975 PF01351 Ribonuclease HII KM398_18980 PF01926 50S ribosome-binding GTPase KM398_18985 PF10502 Signal peptidase, peptidase S26 KM398_18990 PF01245 Ribosomal protein L19 KM398_18995 PF01746 tRNA (Guanine-1)-methyltransferase KM398_19000 PF05239 PRC-barrel domain KM398_19000 PF01782 RimM N-terminal domain KM398_19010 PF00886 Ribosomal protein S16 KM398_19015 PF00448 SRP54-type protein, GTPase domain KM398_19015 PF02881 SRP54-type protein, helical bundle domain KM398_19015 PF02978 Signal peptide binding domain KM398_19020 PF04297 Putative helix-turn-helix protein, YlxM / p13 like KM398_19025 PF02881 SRP54-type protein, helical bundle domain KM398_19025 PF00448 SRP54-type protein, GTPase domain KM398_19030 PF02463 RecF/RecN/SMC N terminal domain KM398_19030 PF06470 SMC proteins Flexible Hinge Domain KM398_19035 PF14622 Ribonuclease-III-like KM398_19035 PF00035 Double-stranded RNA binding motif KM398_19040 PF00550 Phosphopantetheine attachment site KM398_19050 PF00698 Acyl transferase domain KM398_19055 PF02504 Fatty acid synthesis protein KM398_19060 PF03061 Thioesterase superfamily KM398_19065 PF00270 DEAD/DEAH box helicase KM398_19065 PF00271 Helicase conserved C-terminal domain KM398_19065 PF17191 RecG wedge domain KM398_19070 PF02734 DAK2 domain KM398_19070 PF13684 Dihydroxyacetone kinase family KM398_19075 PF03780 Asp23 family, cell envelope-related function KM398_19080 PF00830 Ribosomal L28 family KM398_19085 PF08183 Stage V sporulation protein family KM398_19090 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain KM398_19090 PF04263 Thiamin pyrophosphokinase, catalytic domain KM398_19095 PF00834 Ribulose-phosphate 3 epimerase family KM398_19100 PF16745 RsgA N-terminal domain KM398_19100 PF03193 RsgA GTPase KM398_19105 PF03793 PASTA domain KM398_19105 PF00069 Protein kinase domain KM398_19115 PF04055 Radical SAM superfamily KM398_19120 PF01029 NusB family KM398_19120 PF01189 16S rRNA methyltransferase RsmB/F KM398_19125 PF02911 Formyl transferase, C-terminal domain KM398_19125 PF00551 Formyl transferase KM398_19130 PF01327 Polypeptide deformylase KM398_19135 PF18074 Primosomal protein N C-terminal domain KM398_19135 PF00271 Helicase conserved C-terminal domain KM398_19135 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KM398_19135 PF17764 3′ DNA-binding domain (3′BD) KM398_19135 PF04851 Type III restriction enzyme, res subunit KM398_19140 PF02441 Flavoprotein KM398_19140 PF04127 DNA / pantothenate metabolism flavoprotein KM398_19145 PF01192 RNA polymerase Rpb6 KM398_19150 PF00625 Guanylate kinase KM398_19155 PF04025 Domain of unknown function (DUF370) KM398_19160 PF08340 Domain of unknown function (DUF1732) KM398_19160 PF03755 YicC-like family, N-terminal region KM398_19165 PF00690 Cation transporter/ATPase, N-terminus KM398_19165 PF00689 Cation transporting ATPase, C-terminus KM398_19170 PF05670 NFACT protein RNA binding domain KM398_19175 PF01321 Creatinase/Prolidase N-terminal domain KM398_19175 PF00557 Metallopeptidase family M24 KM398_19205 PF00156 Phosphoribosyl transferase domain KM398_19210 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KM398_19215 PF01180 Dihydroorotate dehydrogenase KM398_19220 PF00175 Oxidoreductase NAD-binding domain KM398_19220 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B KM398_19225 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KM398_19225 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM398_19225 PF02142 MGS-like domain KM398_19230 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KM398_19230 PF00117 Glutamine amidotransferase class-I KM398_19235 PF01979 Amidohydrolase family KM398_19240 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KM398_19240 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KM398_19245 PF00860 Permease family KM398_19250 PF00156 Phosphoribosyl transferase domain KM398_19255 PF00849 RNA pseudouridylate synthase KM398_19255 PF01479 S4 domain KM398_19260 PF01252 Signal peptidase (SPase) II KM398_19270 PF00133 tRNA synthetases class I (I, L, M and V) KM398_19270 PF06827 Zinc finger found in FPG and IleRS KM398_19270 PF08264 Anticodon-binding domain of tRNA KM398_19275 PF05103 DivIVA protein KM398_19280 PF01479 S4 domain KM398_19280 PF17774 Putative RNA-binding domain in YlmH KM398_19285 PF02325 YGGT family KM398_19290 PF04472 Cell division protein SepF KM398_19295 PF01168 Alanine racemase, N-terminal domain KM398_19300 PF02578 Multi-copper polyphenol oxidoreductase laccase KM398_19305 PF05239 PRC-barrel domain KM398_19310 PF04545 Sigma-70, region 4 KM398_19310 PF04539 Sigma-70 region 3 KM398_19310 PF04542 Sigma-70 region 2 KM398_19315 PF04545 Sigma-70, region 4 KM398_19315 PF04542 Sigma-70 region 2 KM398_19320 PF03419 Sporulation factor SpoIIGA KM398_19325 PF12327 FtsZ family, C-terminal domain KM398_19325 PF00091 Tubulin/FtsZ family, GTPase domain KM398_19330 PF02491 SHS2 domain inserted in FTSA KM398_19335 PF03799 Cell division protein FtsQ KM398_19335 PF08478 POTRA domain, FtsQ-type KM398_19340 PF01565 FAD binding domain KM398_19340 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KM398_19345 PF04101 Glycosyltransferase family 28 C-terminal domain KM398_19345 PF03033 Glycosyltransferase family 28 N-terminal domain KM398_19350 PF01098 Cell cycle protein KM398_19355 PF02875 Mur ligase family, glutamate ligase domain KM398_19355 PF08245 Mur ligase middle domain KM398_19360 PF00953 Glycosyl transferase family 4 KM398_19360 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 KM398_19365 PF01225 Mur ligase family, catalytic domain KM398_19365 PF08245 Mur ligase middle domain KM398_19365 PF02875 Mur ligase family, glutamate ligase domain KM398_19370 PF03793 PASTA domain KM398_19370 PF03717 Penicillin-binding Protein dimerisation domain KM398_19370 PF00905 Penicillin binding protein transpeptidase domain KM398_19375 PF00905 Penicillin binding protein transpeptidase domain KM398_19375 PF03717 Penicillin-binding Protein dimerisation domain KM398_19375 PF03793 PASTA domain KM398_19380 PF04977 Septum formation initiator KM398_19385 PF01795 MraW methylase family KM398_19390 PF10079 Bacillithiol biosynthesis BshC KM398_19395 PF02558 Ketopantoate reductase PanE/ApbA KM398_19395 PF08546 Ketopantoate reductase PanE/ApbA C terminal KM398_19400 PF00583 Acetyltransferase (GNAT) family KM398_19410 PF01783 Ribosomal L32p protein family KM398_19415 PF02620 Large ribosomal RNA subunit accumulation protein YceD KM398_19460 PF01510 N-acetylmuramoyl-L-alanine amidase KM398_19460 PF12123 N-acetylmuramoyl-l-alanine amidase KM398_19465 PF05105 Bacteriophage holin family KM398_19540 PF00574 Clp protease KM398_19550 PF03354 Phage Terminase KM398_19570 PF10137 Predicted nucleotide-binding protein containing TIR-like domain KM398_19575 PF00589 Phage integrase family KM398_19625 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM398_19640 PF00692 dUTPase KM398_19655 PF04542 Sigma-70 region 2 KM398_19655 PF04539 Sigma-70 region 3 KM398_19655 PF04545 Sigma-70, region 4 KM398_19680 PF07319 Primosomal protein DnaI N-terminus KM398_19680 PF01695 IstB-like ATP binding protein KM398_19710 PF01381 Helix-turn-helix KM398_19725 PF01381 Helix-turn-helix KM398_19740 PF14659 Phage integrase, N-terminal SAM-like domain KM398_19740 PF00589 Phage integrase family KM398_19745 PF05636 HIGH Nucleotidyl Transferase KM398_19750 PF05362 Lon protease (S16) C-terminal proteolytic domain KM398_19750 PF13180 PDZ domain KM398_19755 PF01734 Patatin-like phospholipase KM398_19760 PF07670 Nucleoside recognition KM398_19765 PF01467 Cytidylyltransferase-like KM398_19780 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) KM398_19785 PF06133 Control of competence regulator ComK, YlbF/YmcA KM398_19790 PF00300 Histidine phosphatase superfamily (branch 1) KM398_19795 PF14003 YlbE-like protein KM398_19800 PF14071 Putative coat protein KM398_19805 PF00188 Cysteine-rich secretory protein family KM398_19805 PF14504 CAP-associated N-terminal KM398_19810 PF08868 YugN-like family KM398_19815 PF00795 Carbon-nitrogen hydrolase KM398_19820 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) KM398_19825 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KM398_19830 PF00510 Cytochrome c oxidase subunit III KM398_19835 PF00115 Cytochrome C and Quinol oxidase polypeptide I KM398_19840 PF00034 Cytochrome c KM398_19840 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KM398_19840 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KM398_19845 PF01040 UbiA prenyltransferase family KM398_19850 PF02628 Cytochrome oxidase assembly protein KM398_19855 PF02785 Biotin carboxylase C-terminal domain KM398_19855 PF00289 Biotin carboxylase, N-terminal domain KM398_19855 PF00364 Biotin-requiring enzyme KM398_19855 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM398_19855 PF00682 HMGL-like KM398_19855 PF02436 Conserved carboxylase domain KM398_19860 PF01098 Cell cycle protein KM398_19865 PF07408 Protein of unknown function (DUF1507) KM398_19875 PF02562 PhoH-like protein KM398_19875 PF13638 PIN domain KM398_19885 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) KM398_19895 PF14036 YlaH-like protein KM398_19900 PF00679 Elongation factor G C-terminus KM398_19900 PF14492 Elongation Factor G, domain II KM398_19900 PF00009 Elongation factor Tu GTP binding domain KM398_19900 PF03144 Elongation factor Tu domain 2 KM398_19910 PF00459 Inositol monophosphatase family KM398_19920 PF06335 Protein of unknown function (DUF1054) KM398_19925 PF05256 Uncharacterised protein family (UPF0223) KM398_19930 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KM398_19930 PF01276 Orn/Lys/Arg decarboxylase, major domain KM398_19970 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM398_19970 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM398_19975 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM398_19975 PF00364 Biotin-requiring enzyme KM398_19975 PF02817 e3 binding domain KM398_19980 PF02780 Transketolase, C-terminal domain KM398_19980 PF02779 Transketolase, pyrimidine binding domain KM398_19985 PF00676 Dehydrogenase E1 component KM398_19995 PF01327 Polypeptide deformylase KM398_20005 PF07288 Protein of unknown function (DUF1447) KM398_20010 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KM398_20010 PF17770 Ribonuclease J C-terminal domain KM398_20010 PF00753 Metallo-beta-lactamase superfamily KM398_20015 PF02080 TrkA-C domain KM398_20015 PF02254 TrkA-N domain KM398_20025 PF07687 Peptidase dimerisation domain KM398_20025 PF01546 Peptidase family M20/M25/M40 KM398_20030 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal KM398_20030 PF00132 Bacterial transferase hexapeptide (six repeats) KM398_20030 PF14602 Hexapeptide repeat of succinyl-transferase KM398_20035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM398_20035 PF03466 LysR substrate binding domain KM398_20050 PF04308 Ribonuclease H-like KM398_20060 PF08796 Protein of unknown function (DUF1797) KM398_20075 PF00563 EAL domain KM398_20075 PF10388 EAL-domain associated signalling protein domain KM398_20085 PF10518 TAT (twin-arginine translocation) pathway signal sequence KM398_20085 PF00149 Calcineurin-like phosphoesterase KM398_20095 PF02503 Polyphosphate kinase middle domain KM398_20095 PF13090 Polyphosphate kinase C-terminal domain 2 KM398_20095 PF17941 Polyphosphate kinase C-terminal domain 1 KM398_20095 PF13089 Polyphosphate kinase N-terminal domain KM398_20100 PF02541 Ppx/GppA phosphatase family KM398_20105 PF14177 YkyB-like protein KM398_20130 PF07690 Major Facilitator Superfamily KM398_20140 PF08267 Cobalamin-independent synthase, N-terminal domain KM398_20140 PF01717 Cobalamin-independent synthase, Catalytic domain KM398_20150 PF14040 Deoxyribonuclease NucA/NucB KM398_20160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_20160 PF00512 His Kinase A (phospho-acceptor) domain KM398_20170 PF00155 Aminotransferase class I and II KM398_20175 PF00356 Bacterial regulatory proteins, lacI family KM398_20175 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KM398_20180 PF00528 Binding-protein-dependent transport system inner membrane component KM398_20185 PF00528 Binding-protein-dependent transport system inner membrane component KM398_20190 PF13416 Bacterial extracellular solute-binding protein KM398_20195 PF00128 Alpha amylase, catalytic domain KM398_20195 PF02903 Alpha amylase, N-terminal ig-like domain KM398_20195 PF16657 Maltogenic Amylase, C-terminal domain KM398_20200 PF00128 Alpha amylase, catalytic domain KM398_20200 PF16657 Maltogenic Amylase, C-terminal domain KM398_20205 PF00005 ABC transporter KM398_20205 PF03459 TOBE domain KM398_20205 PF17912 MalK OB fold domain KM398_20245 PF00108 Thiolase, N-terminal domain KM398_20245 PF02803 Thiolase, C-terminal domain KM398_20250 PF00293 NUDIX domain KM398_20280 PF03551 Transcriptional regulator PadR-like family KM398_20295 PF01008 Initiation factor 2 subunit family KM398_20300 PF01636 Phosphotransferase enzyme family KM398_20305 PF00795 Carbon-nitrogen hydrolase KM398_20310 PF00155 Aminotransferase class I and II KM398_20315 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain KM398_20315 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain KM398_20325 PF00596 Class II Aldolase and Adducin N-terminal domain KM398_20330 PF03079 ARD/ARD' family KM398_20350 PF00990 Diguanylate cyclase, GGDEF domain KM398_20350 PF08448 PAS fold KM398_20355 PF00881 Nitroreductase family KM398_20370 PF02896 PEP-utilising enzyme, TIM barrel domain KM398_20370 PF05524 PEP-utilising enzyme, N-terminal KM398_20370 PF00391 PEP-utilising enzyme, mobile domain KM398_20375 PF00381 PTS HPr component phosphorylation site KM398_20380 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KM398_20380 PF00367 phosphotransferase system, EIIB KM398_20380 PF02378 Phosphotransferase system, EIIC KM398_20385 PF03123 CAT RNA binding domain KM398_20385 PF00874 PRD domain KM398_20395 PF00392 Bacterial regulatory proteins, gntR family KM398_20395 PF07702 UTRA domain KM398_20400 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase KM398_20405 PF01979 Amidohydrolase family KM398_20415 PF04079 Segregation and condensation complex subunit ScpB KM398_20420 PF02616 Segregation and condensation protein ScpA KM398_20430 PF03745 Domain of unknown function (DUF309) KM398_20435 PF00583 Acetyltransferase (GNAT) family KM398_20440 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KM398_20445 PF06207 Protein of unknown function (DUF1002) KM398_20455 PF03323 Bacillus/Clostridium GerA spore germination protein KM398_20460 PF14097 Stage V sporulation protein AE1 KM398_20465 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KM398_20470 PF07451 Stage V sporulation protein AD (SpoVAD) KM398_20475 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KM398_20480 PF13782 Stage V sporulation protein AB KM398_20485 PF12164 Stage V sporulation protein AA KM398_20495 PF00209 Sodium:neurotransmitter symporter family KM398_20500 PF04545 Sigma-70, region 4 KM398_20500 PF04539 Sigma-70 region 3 KM398_20500 PF04542 Sigma-70 region 2 KM398_20505 PF13581 Histidine kinase-like ATPase domain KM398_20510 PF01740 STAS domain KM398_20515 PF07943 Penicillin-binding protein 5, C-terminal domain KM398_20515 PF00768 D-alanyl-D-alanine carboxypeptidase KM398_20520 PF00392 Bacterial regulatory proteins, gntR family KM398_20525 PF00005 ABC transporter KM398_20540 PF01047 MarR family KM398_20550 PF00860 Permease family KM398_20555 PF01544 CorA-like Mg2+ transporter protein KM398_20560 PF00591 Glycosyl transferase family, a/b domain KM398_20560 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain KM398_20560 PF02885 Glycosyl transferase family, helical bundle domain KM398_20565 PF01048 Phosphorylase superfamily KM398_20570 PF01676 Metalloenzyme superfamily KM398_20580 PF02899 Phage integrase, N-terminal SAM-like domain KM398_20580 PF00589 Phage integrase family KM398_20585 PF14004 Protein of unknown function (DUF4227) KM398_20590 PF01475 Ferric uptake regulator family KM398_20595 PF01944 Stage II sporulation protein M KM398_20605 PF00293 NUDIX domain KM398_20610 PF13072 Mother cell inhibitor of FtsZ KM398_20615 PF00248 Aldo/keto reductase family KM398_20620 PF00248 Aldo/keto reductase family KM398_20625 PF13673 Acetyltransferase (GNAT) domain KM398_20625 PF04229 GrpB protein KM398_20635 PF00565 Staphylococcal nuclease homologue KM398_20635 PF02872 5'-nucleotidase, C-terminal domain KM398_20635 PF00746 LPXTG cell wall anchor motif KM398_20635 PF00149 Calcineurin-like phosphoesterase KM398_20645 PF12146 Serine aminopeptidase, S33 KM398_20650 PF03553 Na+/H+ antiporter family KM398_20650 PF13726 Na+-H+ antiporter family KM398_20655 PF00356 Bacterial regulatory proteins, lacI family KM398_20660 PF00583 Acetyltransferase (GNAT) family KM398_20665 PF12146 Serine aminopeptidase, S33 KM398_20670 PF10827 Protein of unknown function (DUF2552) KM398_20680 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM398_20680 PF01872 RibD C-terminal domain KM398_20685 PF00677 Lumazine binding domain KM398_20690 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KM398_20690 PF00925 GTP cyclohydrolase II KM398_20695 PF00885 6,7-dimethyl-8-ribityllumazine synthase KM398_20705 PF04055 Radical SAM superfamily KM398_20705 PF06968 Biotin and Thiamin Synthesis associated domain KM398_20710 PF13847 Methyltransferase domain KM398_20715 PF08241 Methyltransferase domain KM398_20715 PF12697 Alpha/beta hydrolase family KM398_20720 PF00155 Aminotransferase class I and II KM398_20730 PF00202 Aminotransferase class-III KM398_20740 PF03553 Na+/H+ antiporter family KM398_20745 PF02872 5'-nucleotidase, C-terminal domain KM398_20745 PF00149 Calcineurin-like phosphoesterase KM398_20755 PF01037 Lrp/AsnC ligand binding domain KM398_20755 PF13404 AsnC-type helix-turn-helix domain KM398_20770 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KM398_20770 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KM398_20775 PF00202 Aminotransferase class-III KM398_20780 PF00696 Amino acid kinase family KM398_20785 PF01960 ArgJ family KM398_20790 PF01118 Semialdehyde dehydrogenase, NAD binding domain KM398_20790 PF02774 Semialdehyde dehydrogenase, dimerisation domain KM398_20800 PF00106 short chain dehydrogenase KM398_20810 PF03807 NADP oxidoreductase coenzyme F420-dependent KM398_20810 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM398_20815 PF03313 Serine dehydratase alpha chain KM398_20820 PF03315 Serine dehydratase beta chain KM398_20820 PF01842 ACT domain KM398_20830 PF12706 Beta-lactamase superfamily domain KM398_20830 PF00753 Metallo-beta-lactamase superfamily KM398_20840 PF11798 IMS family HHH motif KM398_20840 PF11799 impB/mucB/samB family C-terminal domain KM398_20840 PF00817 impB/mucB/samB family KM398_20850 PF01546 Peptidase family M20/M25/M40 KM398_20850 PF07687 Peptidase dimerisation domain KM398_20855 PF13302 Acetyltransferase (GNAT) domain KM398_20870 PF03734 L,D-transpeptidase catalytic domain KM398_20875 PF11728 Putative aromatic acid exporter C-terminal domain KM398_20875 PF06081 Aromatic acid exporter family member 1 KM398_20880 PF00005 ABC transporter KM398_20885 PF00528 Binding-protein-dependent transport system inner membrane component KM398_20890 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM398_20895 PF06491 Disulphide isomerase KM398_20900 PF11208 Protein of unknown function (DUF2992) KM398_20910 PF01098 Cell cycle protein KM398_20915 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM398_20915 PF00364 Biotin-requiring enzyme KM398_20915 PF02817 e3 binding domain KM398_20920 PF02780 Transketolase, C-terminal domain KM398_20920 PF02779 Transketolase, pyrimidine binding domain KM398_20925 PF00676 Dehydrogenase E1 component KM398_20930 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM398_20930 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM398_20935 PF00871 Acetokinase family KM398_20940 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KM398_20940 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KM398_20945 PF01515 Phosphate acetyl/butaryl transferase KM398_20950 PF02954 Bacterial regulatory protein, Fis family KM398_20950 PF00989 PAS fold KM398_20950 PF00158 Sigma-54 interaction domain KM398_20960 PF03009 Glycerophosphoryl diester phosphodiesterase family KM398_20965 PF14174 YycC-like protein KM398_20975 PF00072 Response regulator receiver domain KM398_20975 PF08769 Sporulation initiation factor Spo0A C terminal KM398_20980 PF17820 PDZ domain KM398_20980 PF05580 SpoIVB peptidase S55 KM398_20985 PF13476 AAA domain KM398_20990 PF01316 Arginine repressor, DNA binding domain KM398_20990 PF02863 Arginine repressor, C-terminal domain KM398_20995 PF01728 FtsJ-like methyltransferase KM398_20995 PF01479 S4 domain KM398_21000 PF02780 Transketolase, C-terminal domain KM398_21000 PF02779 Transketolase, pyrimidine binding domain KM398_21000 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KM398_21005 PF00348 Polyprenyl synthetase KM398_21010 PF02609 Exonuclease VII small subunit KM398_21015 PF13742 OB-fold nucleic acid binding domain KM398_21015 PF02601 Exonuclease VII, large subunit KM398_21020 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KM398_21020 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KM398_21025 PF01029 NusB family KM398_21030 PF03780 Asp23 family, cell envelope-related function KM398_21035 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM398_21035 PF00289 Biotin carboxylase, N-terminal domain KM398_21035 PF02785 Biotin carboxylase C-terminal domain KM398_21040 PF00364 Biotin-requiring enzyme KM398_21050 PF12685 SpoIIIAH-like protein KM398_21060 PF09581 Stage III sporulation protein AF (Spore_III_AF) KM398_21065 PF09546 Stage III sporulation protein AE (spore_III_AE) KM398_21070 PF06686 Stage III sporulation protein AC/AD protein family KM398_21075 PF06686 Stage III sporulation protein AC/AD protein family KM398_21080 PF09548 Stage III sporulation protein AB (spore_III_AB) KM398_21105 PF01132 Elongation factor P (EF-P) OB domain KM398_21105 PF08207 Elongation factor P (EF-P) KOW-like domain KM398_21105 PF09285 Elongation factor P, C-terminal KM398_21110 PF00557 Metallopeptidase family M24 KM398_21110 PF01321 Creatinase/Prolidase N-terminal domain KM398_21115 PF01220 Dehydroquinase class II KM398_21120 PF11085 Conserved membrane protein YqhR KM398_21125 PF07136 Protein of unknown function (DUF1385) KM398_21135 PF13419 Haloacid dehalogenase-like hydrolase KM398_21140 PF02742 Iron dependent repressor, metal binding and dimerisation domain KM398_21140 PF01325 Iron dependent repressor, N-terminal DNA binding domain KM398_21155 PF03099 Biotin/lipoate A/B protein ligase family KM398_21160 PF00581 Rhodanese-like domain KM398_21165 PF00356 Bacterial regulatory proteins, lacI family KM398_21165 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KM398_21175 PF00893 Small Multidrug Resistance protein KM398_21180 PF00893 Small Multidrug Resistance protein KM398_21215 PF00005 ABC transporter KM398_21220 PF00392 Bacterial regulatory proteins, gntR family KM398_21235 PF02347 Glycine cleavage system P-protein KM398_21240 PF02347 Glycine cleavage system P-protein KM398_21245 PF08669 Glycine cleavage T-protein C-terminal barrel domain KM398_21245 PF01571 Aminomethyltransferase folate-binding domain KM398_21250 PF00271 Helicase conserved C-terminal domain KM398_21250 PF00176 SNF2 family N-terminal domain KM398_21255 PF11079 Bacterial protein YqhG of unknown function KM398_21275 PF14038 YqzE-like protein KM398_21280 PF01202 Shikimate kinase KM398_21305 PF07963 Prokaryotic N-terminal methylation motif KM398_21315 PF00482 Type II secretion system (T2SS), protein F KM398_21320 PF00437 Type II/IV secretion system protein KM398_21330 PF11117 Protein of unknown function (DUF2626) KM398_21335 PF00375 Sodium:dicarboxylate symporter family KM398_21370 PF04101 Glycosyltransferase family 28 C-terminal domain KM398_21370 PF03033 Glycosyltransferase family 28 N-terminal domain KM398_21375 PF02574 Homocysteine S-methyltransferase KM398_21375 PF00809 Pterin binding enzyme KM398_21375 PF02965 Vitamin B12 dependent methionine synthase, activation domain KM398_21375 PF02607 B12 binding domain KM398_21375 PF02310 B12 binding domain KM398_21380 PF02219 Methylenetetrahydrofolate reductase KM398_21380 PF02574 Homocysteine S-methyltransferase KM398_21385 PF01053 Cys/Met metabolism PLP-dependent enzyme KM398_21390 PF01053 Cys/Met metabolism PLP-dependent enzyme KM398_21400 PF01022 Bacterial regulatory protein, arsR family KM398_21410 PF00753 Metallo-beta-lactamase superfamily KM398_21415 PF10958 Protein of unknown function (DUF2759) KM398_21420 PF00480 ROK family KM398_21425 PF06014 Bacterial protein of unknown function (DUF910) KM398_21430 PF01812 5-formyltetrahydrofolate cyclo-ligase family KM398_21435 PF00471 Ribosomal protein L33 KM398_21440 PF00483 Nucleotidyl transferase KM398_21445 PF01895 PhoU domain KM398_21450 PF00005 ABC transporter KM398_21455 PF00528 Binding-protein-dependent transport system inner membrane component KM398_21460 PF00528 Binding-protein-dependent transport system inner membrane component KM398_21465 PF12849 PBP superfamily domain KM398_21470 PF00905 Penicillin binding protein transpeptidase domain KM398_21470 PF03717 Penicillin-binding Protein dimerisation domain KM398_21475 PF07690 Major Facilitator Superfamily KM398_21480 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KM398_21480 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KM398_21500 PF04551 GcpE protein KM398_21505 PF01475 Ferric uptake regulator family KM398_21510 PF00950 ABC 3 transport family KM398_21515 PF00005 ABC transporter KM398_21520 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM398_21520 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM398_21525 PF11116 Protein of unknown function (DUF2624) KM398_21530 PF01261 Xylose isomerase-like TIM barrel KM398_21535 PF00271 Helicase conserved C-terminal domain KM398_21535 PF00270 DEAD/DEAH box helicase KM398_21545 PF02401 LytB protein KM398_21550 PF01784 NIF3 (NGG1p interacting factor 3) KM398_21555 PF04816 tRNA (adenine(22)-N(1))-methyltransferase KM398_21560 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KM398_21565 PF04539 Sigma-70 region 3 KM398_21565 PF03979 Sigma-70 factor, region 1.1 KM398_21565 PF04542 Sigma-70 region 2 KM398_21565 PF00140 Sigma-70 factor, region 1.2 KM398_21565 PF04545 Sigma-70, region 4 KM398_21570 PF10410 DnaB-helicase binding domain of primase KM398_21570 PF01807 CHC2 zinc finger KM398_21570 PF08275 DNA primase catalytic core, N-terminal domain KM398_21575 PF03618 Kinase/pyrophosphorylase KM398_21580 PF00571 CBS domain KM398_21580 PF08279 HTH domain KM398_21585 PF11967 Recombination protein O N terminal KM398_21585 PF02565 Recombination protein O C terminal KM398_21595 PF07650 KH domain KM398_21595 PF01926 50S ribosome-binding GTPase KM398_21600 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM398_21605 PF01219 Prokaryotic diacylglycerol kinase KM398_21610 PF02130 Uncharacterized protein family UPF0054 KM398_21615 PF07698 7TM receptor with intracellular HD hydrolase KM398_21615 PF07697 7TM-HD extracellular KM398_21615 PF01966 HD domain KM398_21620 PF02562 PhoH-like protein KM398_21625 PF06898 Putative stage IV sporulation protein YqfD KM398_21630 PF07873 YabP family KM398_21635 PF09424 Yqey-like protein KM398_21640 PF01165 Ribosomal protein S21 KM398_21645 PF04055 Radical SAM superfamily KM398_21645 PF01938 TRAM domain KM398_21645 PF00919 Uncharacterized protein family UPF0004 KM398_21650 PF04452 RNA methyltransferase KM398_21660 PF00226 DnaJ domain KM398_21660 PF01556 DnaJ C terminal domain KM398_21660 PF00684 DnaJ central domain KM398_21665 PF00012 Hsp70 protein KM398_21670 PF01025 GrpE KM398_21675 PF01628 HrcA protein C terminal domain KM398_21680 PF04055 Radical SAM superfamily KM398_21680 PF06969 HemN C-terminal domain KM398_21685 PF01638 HxlR-like helix-turn-helix KM398_21690 PF06421 GTP-binding protein LepA C-terminus KM398_21690 PF00679 Elongation factor G C-terminus KM398_21690 PF00009 Elongation factor Tu GTP binding domain KM398_21690 PF03144 Elongation factor Tu domain 2 KM398_21700 PF03418 Germination protease KM398_21705 PF01649 Ribosomal protein S20 KM398_21710 PF06144 DNA polymerase III, delta subunit KM398_21715 PF14141 YqzM-like protein KM398_21720 PF13567 Domain of unknown function (DUF4131) KM398_21720 PF00753 Metallo-beta-lactamase superfamily KM398_21720 PF03772 Competence protein KM398_21725 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM398_21730 PF10531 SLBB domain KM398_21735 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM398_21735 PF03807 NADP oxidoreductase coenzyme F420-dependent KM398_21740 PF13649 Methyltransferase domain KM398_21750 PF01966 HD domain KM398_21755 PF01467 Cytidylyltransferase-like KM398_21760 PF01985 CRS1 / YhbY (CRM) domain KM398_21765 PF08501 Shikimate dehydrogenase substrate binding domain KM398_21765 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KM398_21765 PF01488 Shikimate / quinate 5-dehydrogenase KM398_21770 PF01926 50S ribosome-binding GTPase KM398_21785 PF02666 Phosphatidylserine decarboxylase KM398_21790 PF04542 Sigma-70 region 2 KM398_21790 PF04545 Sigma-70, region 4 KM398_21800 PF16244 Domain of unknown function (DUF4901) KM398_21805 PF00471 Ribosomal protein L33 KM398_21810 PF00881 Nitroreductase family KM398_21815 PF04607 Region found in RelA / SpoT proteins KM398_21825 PF00245 Alkaline phosphatase KM398_21835 PF00561 alpha/beta hydrolase fold KM398_21835 PF08386 TAP-like protein KM398_21870 PF02225 PA domain KM398_21870 PF00082 Subtilase family KM398_21870 PF13860 FlgD Ig-like domain KM398_21870 PF05922 Peptidase inhibitor I9 KM398_21875 PF00351 Biopterin-dependent aromatic amino acid hydroxylase KM398_21890 PF07681 DoxX KM398_21920 PF00005 ABC transporter KM398_21925 PF01032 FecCD transport family KM398_21930 PF01497 Periplasmic binding protein KM398_21935 PF14143 YrhC-like protein KM398_21940 PF00171 Aldehyde dehydrogenase family KM398_21940 PF00465 Iron-containing alcohol dehydrogenase KM398_21945 PF01053 Cys/Met metabolism PLP-dependent enzyme KM398_21950 PF00291 Pyridoxal-phosphate dependent enzyme KM398_21955 PF01048 Phosphorylase superfamily KM398_21960 PF08241 Methyltransferase domain KM398_21975 PF03717 Penicillin-binding Protein dimerisation domain KM398_21975 PF00905 Penicillin binding protein transpeptidase domain KM398_21980 PF03449 Transcription elongation factor, N-terminal KM398_21980 PF01272 Transcription elongation factor, GreA/GreB, C-term KM398_21985 PF00485 Phosphoribulokinase / Uridine kinase family KM398_21990 PF01136 Peptidase family U32 KM398_21990 PF16325 Peptidase family U32 C-terminal domain KM398_21995 PF01136 Peptidase family U32 KM398_22000 PF01596 O-methyltransferase KM398_22005 PF02618 YceG-like family KM398_22010 PF06949 Protein of unknown function (DUF1292) KM398_22015 PF03652 Holliday junction resolvase KM398_22020 PF06135 IreB regulatory phosphoprotein KM398_22025 PF02272 DHHA1 domain KM398_22025 PF01411 tRNA synthetases class II (A) KM398_22025 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM398_22035 PF01594 AI-2E family transporter KM398_22055 PF14490 Helix-hairpin-helix containing domain KM398_22055 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain KM398_22055 PF13538 UvrD-like helicase C-terminal domain KM398_22070 PF00266 Aminotransferase class-V KM398_22075 PF02082 Transcriptional regulator KM398_22080 PF05496 Holliday junction DNA helicase RuvB P-loop domain KM398_22080 PF12002 MgsA AAA+ ATPase C terminal KM398_22080 PF16193 AAA C-terminal domain KM398_22090 PF00899 ThiF family KM398_22095 PF01336 OB-fold nucleic acid binding domain KM398_22095 PF00152 tRNA synthetases class II (D, K and N) KM398_22095 PF02938 GAD domain KM398_22100 PF03129 Anticodon binding domain KM398_22100 PF13393 Histidyl-tRNA synthetase KM398_22110 PF02580 D-Tyr-tRNA(Tyr) deacylase KM398_22115 PF13291 ACT domain KM398_22115 PF04607 Region found in RelA / SpoT proteins KM398_22115 PF02824 TGS domain KM398_22120 PF00156 Phosphoribosyl transferase domain KM398_22125 PF01368 DHH family KM398_22125 PF02272 DHHA1 domain KM398_22125 PF17768 RecJ OB domain KM398_22125 PF10141 Single-strand DNA-specific exonuclease, C terminal domain KM398_22130 PF01545 Cation efflux family KM398_22130 PF16916 Dimerisation domain of Zinc Transporter KM398_22135 PF02355 Protein export membrane protein KM398_22135 PF07549 SecD/SecF GG Motif KM398_22140 PF13797 Post-transcriptional regulator KM398_22145 PF14667 Polysaccharide biosynthesis C-terminal domain KM398_22145 PF01943 Polysaccharide biosynthesis protein KM398_22150 PF04239 Protein of unknown function (DUF421) KM398_22160 PF02699 Preprotein translocase subunit KM398_22165 PF01702 Queuine tRNA-ribosyltransferase KM398_22170 PF02547 Queuosine biosynthesis protein KM398_22175 PF11146 Protein of unknown function (DUF2905) KM398_22180 PF05491 RuvB C-terminal winged helix domain KM398_22180 PF17864 RuvB AAA lid domain KM398_22180 PF05496 Holliday junction DNA helicase RuvB P-loop domain KM398_22185 PF01330 RuvA N terminal domain KM398_22185 PF07499 RuvA, C-terminal domain KM398_22190 PF01497 Periplasmic binding protein KM398_22200 PF00892 EamA-like transporter family KM398_22205 PF00892 EamA-like transporter family KM398_22210 PF01022 Bacterial regulatory protein, arsR family KM398_22225 PF01476 LysM domain KM398_22230 PF02445 Quinolinate synthetase A protein KM398_22235 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KM398_22235 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KM398_22240 PF00890 FAD binding domain KM398_22240 PF02910 Fumarate reductase flavoprotein C-term KM398_22245 PF00266 Aminotransferase class-V KM398_22250 PF08279 HTH domain KM398_22250 PF02829 3H domain KM398_22255 PF03473 MOSC domain KM398_22255 PF03475 3-alpha domain KM398_22260 PF01842 ACT domain KM398_22260 PF00800 Prephenate dehydratase KM398_22265 PF02687 FtsX-like permease family KM398_22270 PF02687 FtsX-like permease family KM398_22275 PF00005 ABC transporter KM398_22285 PF00072 Response regulator receiver domain KM398_22285 PF00486 Transcriptional regulatory protein, C terminal KM398_22290 PF09269 Domain of unknown function (DUF1967) KM398_22290 PF01018 GTP1/OBG KM398_22290 PF01926 50S ribosome-binding GTPase KM398_22295 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KM398_22295 PF14682 Sporulation initiation phospho-transferase B, C-terminal KM398_22300 PF01016 Ribosomal L27 protein KM398_22305 PF04327 Cysteine protease Prp KM398_22310 PF00829 Ribosomal prokaryotic L21 protein KM398_22315 PF10150 Ribonuclease E/G family KM398_22315 PF00575 S1 RNA binding domain KM398_22320 PF02163 Peptidase family M50 KM398_22325 PF01551 Peptidase family M23 KM398_22330 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KM398_22335 PF03775 Septum formation inhibitor MinC, C-terminal domain KM398_22345 PF04085 rod shape-determining protein MreC KM398_22355 PF04002 RadC-like JAB domain KM398_22360 PF02545 Maf-like protein KM398_22370 PF08245 Mur ligase middle domain KM398_22370 PF02875 Mur ligase family, glutamate ligase domain KM398_22375 PF00133 tRNA synthetases class I (I, L, M and V) KM398_22375 PF08264 Anticodon-binding domain of tRNA KM398_22375 PF10458 Valyl tRNA synthetase tRNA binding arm KM398_22385 PF01476 LysM domain KM398_22390 PF00202 Aminotransferase class-III KM398_22395 PF00490 Delta-aminolevulinic acid dehydratase KM398_22400 PF02602 Uroporphyrinogen-III synthase HemD KM398_22405 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KM398_22405 PF03900 Porphobilinogen deaminase, C-terminal domain KM398_22410 PF01578 Cytochrome C assembly protein KM398_22415 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KM398_22415 PF01488 Shikimate / quinate 5-dehydrogenase KM398_22415 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KM398_22420 PF01047 MarR family KM398_22425 PF02566 OsmC-like protein KM398_22430 PF01926 50S ribosome-binding GTPase KM398_22435 PF00004 ATPase family associated with various cellular activities (AAA) KM398_22435 PF05362 Lon protease (S16) C-terminal proteolytic domain KM398_22435 PF02190 ATP-dependent protease La (LON) substrate-binding domain KM398_22440 PF00004 ATPase family associated with various cellular activities (AAA) KM398_22440 PF05362 Lon protease (S16) C-terminal proteolytic domain KM398_22445 PF10431 C-terminal, D2-small domain, of ClpB protein KM398_22445 PF06689 ClpX C4-type zinc finger KM398_22445 PF07724 AAA domain (Cdc48 subfamily) KM398_22450 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KM398_22450 PF05698 Bacterial trigger factor protein (TF) C-terminus KM398_22450 PF05697 Bacterial trigger factor protein (TF) KM398_22465 PF08000 Bacterial PH domain KM398_22465 PF11724 YvbH-like oligomerisation region KM398_22485 PF12850 Calcineurin-like phosphoesterase superfamily domain KM398_22490 PF01725 Ham1 family KM398_22495 PF01138 3' exoribonuclease family, domain 1 KM398_22495 PF03725 3' exoribonuclease family, domain 2 KM398_22500 PF10646 Sporulation and spore germination KM398_22505 PF01177 Asp/Glu/Hydantoin racemase KM398_22510 PF07690 Major Facilitator Superfamily KM398_22520 PF00440 Bacterial regulatory proteins, tetR family KM398_22535 PF00196 Bacterial regulatory proteins, luxR family KM398_22540 PF00860 Permease family KM398_22550 PF07969 Amidohydrolase family KM398_22555 PF07969 Amidohydrolase family KM398_22560 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM398_22565 PF12911 N-terminal TM domain of oligopeptide transport permease C KM398_22565 PF00528 Binding-protein-dependent transport system inner membrane component KM398_22570 PF00528 Binding-protein-dependent transport system inner membrane component KM398_22575 PF00005 ABC transporter KM398_22575 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM398_22580 PF00005 ABC transporter KM398_22580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM398_22585 PF07694 5TMR of 5TMR-LYT KM398_22585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_22585 PF06580 Histidine kinase KM398_22590 PF00072 Response regulator receiver domain KM398_22590 PF04397 LytTr DNA-binding domain KM398_22605 PF04024 PspC domain KM398_22610 PF01381 Helix-turn-helix KM398_22610 PF07883 Cupin domain KM398_22615 PF13536 Putative multidrug resistance efflux transporter KM398_22620 PF00230 Major intrinsic protein KM398_22625 PF02082 Transcriptional regulator KM398_22635 PF00005 ABC transporter KM398_22635 PF13732 Domain of unknown function (DUF4162) KM398_22640 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) KM398_22650 PF01618 MotA/TolQ/ExbB proton channel family KM398_22655 PF02557 D-alanyl-D-alanine carboxypeptidase KM398_22660 PF03061 Thioesterase superfamily KM398_22665 PF13085 2Fe-2S iron-sulfur cluster binding domain KM398_22665 PF13183 4Fe-4S dicluster domain KM398_22670 PF00890 FAD binding domain KM398_22670 PF02910 Fumarate reductase flavoprotein C-term KM398_22675 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KM398_22680 PF10702 Protein of unknown function (DUF2507) KM398_22685 PF08459 UvrC Helix-hairpin-helix N-terminal KM398_22685 PF01541 GIY-YIG catalytic domain KM398_22685 PF02151 UvrB/uvrC motif KM398_22690 PF00085 Thioredoxin KM398_22695 PF00766 Electron transfer flavoprotein FAD-binding domain KM398_22695 PF01012 Electron transfer flavoprotein domain KM398_22700 PF01012 Electron transfer flavoprotein domain KM398_22705 PF00378 Enoyl-CoA hydratase/isomerase KM398_22710 PF08359 YsiA-like protein, C-terminal region KM398_22710 PF00440 Bacterial regulatory proteins, tetR family KM398_22715 PF00501 AMP-binding enzyme KM398_22715 PF13193 AMP-binding enzyme C-terminal domain KM398_22725 PF01497 Periplasmic binding protein KM398_22730 PF01032 FecCD transport family KM398_22735 PF05163 DinB family KM398_22765 PF00005 ABC transporter KM398_22770 PF00512 His Kinase A (phospho-acceptor) domain KM398_22770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_22775 PF00072 Response regulator receiver domain KM398_22775 PF00486 Transcriptional regulatory protein, C terminal KM398_22785 PF09962 Uncharacterized conserved protein (DUF2196) KM398_22790 PF10672 S-adenosylmethionine-dependent methyltransferase KM398_22790 PF17785 PUA-like domain KM398_22800 PF03992 Antibiotic biosynthesis monooxygenase KM398_22805 PF04203 Sortase domain KM398_22810 PF00005 ABC transporter KM398_22815 PF01032 FecCD transport family KM398_22820 PF01497 Periplasmic binding protein KM398_22825 PF05031 Iron Transport-associated domain KM398_22835 PF05031 Iron Transport-associated domain KM398_22840 PF05525 Branched-chain amino acid transport protein KM398_22845 PF00849 RNA pseudouridylate synthase KM398_22845 PF01479 S4 domain KM398_22850 PF00488 MutS domain V KM398_22850 PF01713 Smr domain KM398_22855 PF02811 PHP domain KM398_22855 PF14791 DNA polymerase beta thumb KM398_22855 PF14716 Helix-hairpin-helix domain KM398_22860 PF02674 Colicin V production protein KM398_22865 PF05164 Cell division protein ZapA KM398_22870 PF11858 Domain of unknown function (DUF3378) KM398_22870 PF01351 Ribonuclease HII KM398_22890 PF00152 tRNA synthetases class II (D, K and N) KM398_22890 PF01336 OB-fold nucleic acid binding domain KM398_22895 PF03483 B3/4 domain KM398_22895 PF03484 tRNA synthetase B5 domain KM398_22895 PF03147 Ferredoxin-fold anticodon binding domain KM398_22895 PF01588 Putative tRNA binding domain KM398_22895 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KM398_22900 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KM398_22900 PF01409 tRNA synthetases class II core domain (F) KM398_22905 PF08032 RNA 2'-O ribose methyltransferase substrate binding KM398_22905 PF00588 SpoU rRNA Methylase family KM398_22910 PF14098 Small, acid-soluble spore protein I KM398_22915 PF01966 HD domain KM398_22940 PF07690 Major Facilitator Superfamily KM398_22950 PF00440 Bacterial regulatory proteins, tetR family KM398_22950 PF16859 Tetracyclin repressor-like, C-terminal domain KM398_22955 PF05343 M42 glutamyl aminopeptidase KM398_22965 PF00453 Ribosomal protein L20 KM398_22970 PF01632 Ribosomal protein L35 KM398_22975 PF00707 Translation initiation factor IF-3, C-terminal domain KM398_22975 PF05198 Translation initiation factor IF-3, N-terminal domain KM398_22980 PF03129 Anticodon binding domain KM398_22980 PF02824 TGS domain KM398_22980 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM398_22980 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM398_22985 PF08812 YtxC-like family KM398_22990 PF01695 IstB-like ATP binding protein KM398_22990 PF07319 Primosomal protein DnaI N-terminus KM398_22995 PF07261 Replication initiation and membrane attachment KM398_23000 PF03477 ATP cone domain KM398_23005 PF02675 S-adenosylmethionine decarboxylase KM398_23010 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KM398_23010 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KM398_23015 PF01121 Dephospho-CoA kinase KM398_23020 PF02659 Putative manganese efflux pump KM398_23025 PF06827 Zinc finger found in FPG and IleRS KM398_23025 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KM398_23025 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KM398_23030 PF00476 DNA polymerase family A KM398_23030 PF01367 5'-3' exonuclease, C-terminal SAM fold KM398_23030 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KM398_23035 PF00989 PAS fold KM398_23035 PF16736 Single Cache-like KM398_23035 PF00512 His Kinase A (phospho-acceptor) domain KM398_23035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_23040 PF00486 Transcriptional regulatory protein, C terminal KM398_23040 PF00072 Response regulator receiver domain KM398_23055 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KM398_23055 PF00056 lactate/malate dehydrogenase, NAD binding domain KM398_23060 PF00180 Isocitrate/isopropylmalate dehydrogenase KM398_23065 PF00285 Citrate synthase, C-terminal domain KM398_23070 PF04284 Protein of unknown function (DUF441) KM398_23075 PF01594 AI-2E family transporter KM398_23080 PF04186 FxsA cytoplasmic membrane protein KM398_23085 PF00391 PEP-utilising enzyme, mobile domain KM398_23085 PF00224 Pyruvate kinase, barrel domain KM398_23085 PF02887 Pyruvate kinase, alpha/beta domain KM398_23090 PF00365 Phosphofructokinase KM398_23095 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KM398_23100 PF17848 Acetyl-coA carboxylase zinc finger domain KM398_23100 PF01039 Carboxyl transferase domain KM398_23105 PF00392 Bacterial regulatory proteins, gntR family KM398_23110 PF00390 Malic enzyme, N-terminal domain KM398_23110 PF03949 Malic enzyme, NAD binding domain KM398_23115 PF07733 Bacterial DNA polymerase III alpha NTPase domain KM398_23115 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KM398_23115 PF14579 Helix-hairpin-helix motif KM398_23115 PF02811 PHP domain KM398_23115 PF01336 OB-fold nucleic acid binding domain KM398_23120 PF14034 Sporulation protein YtrH KM398_23130 PF01368 DHH family KM398_23130 PF02272 DHHA1 domain KM398_23135 PF14007 YtpI-like protein KM398_23150 PF00392 Bacterial regulatory proteins, gntR family KM398_23150 PF03061 Thioesterase superfamily KM398_23150 PF00571 CBS domain KM398_23150 PF07085 DRTGG domain KM398_23165 PF00557 Metallopeptidase family M24 KM398_23165 PF01321 Creatinase/Prolidase N-terminal domain KM398_23170 PF11518 Protein of unknown function (DUF3221) KM398_23200 PF12746 GNAT acetyltransferase KM398_23205 PF07883 Cupin domain KM398_23215 PF01381 Helix-turn-helix KM398_23225 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KM398_23225 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KM398_23235 PF00582 Universal stress protein family KM398_23255 PF00206 Lyase KM398_23255 PF14698 Argininosuccinate lyase C-terminal KM398_23260 PF00764 Arginosuccinate synthase KM398_23275 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM398_23275 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM398_23280 PF12787 EcsC protein family KM398_23295 PF00871 Acetokinase family KM398_23300 PF02384 N-6 DNA Methylase KM398_23305 PF08534 Redoxin KM398_23310 PF09579 Sporulation protein YtfJ (Spore_YtfJ) KM398_23320 PF01513 ATP-NAD kinase KM398_23325 PF07969 Amidohydrolase family KM398_23335 PF00501 AMP-binding enzyme KM398_23335 PF13193 AMP-binding enzyme C-terminal domain KM398_23340 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM398_23345 PF02926 THUMP domain KM398_23345 PF02568 Thiamine biosynthesis protein (ThiI) KM398_23350 PF00266 Aminotransferase class-V KM398_23355 PF06160 Septation ring formation regulator, EzrA KM398_23360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM398_23360 PF03466 LysR substrate binding domain KM398_23365 PF00892 EamA-like transporter family KM398_23375 PF13185 GAF domain KM398_23380 PF01053 Cys/Met metabolism PLP-dependent enzyme KM398_23385 PF00163 Ribosomal protein S4/S9 N-terminal domain KM398_23385 PF01479 S4 domain KM398_23400 PF01479 S4 domain KM398_23400 PF00579 tRNA synthetases class I (W and Y) KM398_23410 PF08281 Sigma-70, region 4 KM398_23410 PF04542 Sigma-70 region 2 KM398_23420 PF00501 AMP-binding enzyme KM398_23420 PF13193 AMP-binding enzyme C-terminal domain KM398_23425 PF00583 Acetyltransferase (GNAT) family KM398_23430 PF00571 CBS domain KM398_23435 PF00850 Histone deacetylase domain KM398_23445 PF00486 Transcriptional regulatory protein, C terminal KM398_23445 PF00072 Response regulator receiver domain KM398_23450 PF00672 HAMP domain KM398_23450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_23450 PF00512 His Kinase A (phospho-acceptor) domain KM398_23450 PF13426 PAS domain KM398_23455 PF12796 Ankyrin repeats (3 copies) KM398_23460 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM398_23465 PF01741 Large-conductance mechanosensitive channel, MscL KM398_23490 PF00356 Bacterial regulatory proteins, lacI family KM398_23495 PF07537 CamS sex pheromone cAM373 precursor KM398_23500 PF11009 Protein of unknown function (DUF2847) KM398_23510 PF02073 Thermophilic metalloprotease (M29) KM398_23530 PF13302 Acetyltransferase (GNAT) domain KM398_23535 PF01225 Mur ligase family, catalytic domain KM398_23535 PF02875 Mur ligase family, glutamate ligase domain KM398_23535 PF08245 Mur ligase middle domain KM398_23545 PF17854 FtsK alpha domain KM398_23545 PF09397 Ftsk gamma domain KM398_23545 PF01580 FtsK/SpoIIIE family KM398_23555 PF14794 Domain of unknown function (DUF4479) KM398_23555 PF01588 Putative tRNA binding domain KM398_23560 PF07285 Protein of unknown function (DUF1444) KM398_23565 PF00085 Thioredoxin KM398_23570 PF01931 Protein of unknown function DUF84 KM398_23575 PF05343 M42 glutamyl aminopeptidase KM398_23585 PF00753 Metallo-beta-lactamase superfamily KM398_23590 PF02390 Putative methyltransferase KM398_23595 PF14165 YtzH-like protein KM398_23600 PF01636 Phosphotransferase enzyme family KM398_23605 PF00128 Alpha amylase, catalytic domain KM398_23605 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KM398_23605 PF17999 Pullulanase N1-terminal domain KM398_23610 PF02834 LigT like Phosphoesterase KM398_23620 PF08220 DeoR-like helix-turn-helix domain KM398_23625 PF01479 S4 domain KM398_23625 PF00849 RNA pseudouridylate synthase KM398_23630 PF14667 Polysaccharide biosynthesis C-terminal domain KM398_23630 PF01943 Polysaccharide biosynthesis protein KM398_23640 PF07690 Major Facilitator Superfamily KM398_23645 PF01022 Bacterial regulatory protein, arsR family KM398_23650 PF08327 Activator of Hsp90 ATPase homolog 1-like protein KM398_23660 PF10957 Sporulation protein Cse60 KM398_23670 PF02559 CarD-like/TRCF domain KM398_23680 PF06800 Sugar transport protein KM398_23695 PF02391 MoaE protein KM398_23700 PF03205 Molybdopterin guanine dinucleotide synthesis protein B KM398_23705 PF00994 Probable molybdopterin binding domain KM398_23705 PF03454 MoeA C-terminal region (domain IV) KM398_23705 PF03453 MoeA N-terminal region (domain I and II) KM398_23710 PF01967 MoaC family KM398_23715 PF00899 ThiF family KM398_23740 PF00581 Rhodanese-like domain KM398_23750 PF00561 alpha/beta hydrolase fold KM398_23755 PF03323 Bacillus/Clostridium GerA spore germination protein KM398_23760 PF03845 Spore germination protein KM398_23790 PF08264 Anticodon-binding domain of tRNA KM398_23790 PF00133 tRNA synthetases class I (I, L, M and V) KM398_23790 PF13603 Leucyl-tRNA synthetase, Domain 2 KM398_23790 PF09334 tRNA synthetases class I (M) KM398_23795 PF07690 Major Facilitator Superfamily KM398_23800 PF00999 Sodium/hydrogen exchanger family KM398_23805 PF02080 TrkA-C domain KM398_23810 PF00589 Phage integrase family KM398_23820 PF00005 ABC transporter KM398_23825 PF07786 Protein of unknown function (DUF1624) KM398_23825 PF04235 Protein of unknown function (DUF418) KM398_23835 PF10732 Protein of unknown function (DUF2524) KM398_23840 PF16199 Radical_SAM C-terminal domain KM398_23840 PF04055 Radical SAM superfamily KM398_23845 PF06962 Putative rRNA methylase KM398_23850 PF13732 Domain of unknown function (DUF4162) KM398_23850 PF00005 ABC transporter KM398_23860 PF01177 Asp/Glu/Hydantoin racemase KM398_23875 PF10776 Protein of unknown function (DUF2600) KM398_23880 PF12146 Serine aminopeptidase, S33 KM398_23885 PF00132 Bacterial transferase hexapeptide (six repeats) KM398_23890 PF01569 PAP2 superfamily KM398_23895 PF00534 Glycosyl transferases group 1 KM398_23895 PF13439 Glycosyltransferase Family 4 KM398_23900 PF12804 MobA-like NTP transferase domain KM398_23905 PF00994 Probable molybdopterin binding domain KM398_23920 PF02773 S-adenosylmethionine synthetase, C-terminal domain KM398_23920 PF02772 S-adenosylmethionine synthetase, central domain KM398_23920 PF00438 S-adenosylmethionine synthetase, N-terminal domain KM398_23925 PF01293 Phosphoenolpyruvate carboxykinase KM398_23960 PF01784 NIF3 (NGG1p interacting factor 3) KM398_23965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_23965 PF00989 PAS fold KM398_23965 PF00512 His Kinase A (phospho-acceptor) domain KM398_23965 PF13188 PAS domain KM398_23965 PF13426 PAS domain KM398_23970 PF08447 PAS fold KM398_23970 PF00512 His Kinase A (phospho-acceptor) domain KM398_23970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_23970 PF00989 PAS fold KM398_23975 PF00561 alpha/beta hydrolase fold KM398_23975 PF08386 TAP-like protein KM398_24000 PF00005 ABC transporter KM398_24005 PF00528 Binding-protein-dependent transport system inner membrane component KM398_24030 PF00293 NUDIX domain KM398_24050 PF02664 S-Ribosylhomocysteinase (LuxS) KM398_24055 PF01809 Putative membrane protein insertion efficiency factor KM398_24060 PF00484 Carbonic anhydrase KM398_24065 PF01654 Cytochrome bd terminal oxidase subunit I KM398_24070 PF02322 Cytochrome bd terminal oxidase subunit II KM398_24075 PF10676 Spore germination protein gerPA/gerPF KM398_24090 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM398_24090 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM398_24115 PF04012 PspA/IM30 family KM398_24130 PF07664 Ferrous iron transport protein B C terminus KM398_24130 PF17910 FeoB cytosolic helical domain KM398_24130 PF02421 Ferrous iron transport protein B KM398_24130 PF07670 Nucleoside recognition KM398_24140 PF09515 Thiamine transporter protein (Thia_YuaJ) KM398_24145 PF00672 HAMP domain KM398_24145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_24145 PF00512 His Kinase A (phospho-acceptor) domain KM398_24150 PF00072 Response regulator receiver domain KM398_24150 PF00486 Transcriptional regulatory protein, C terminal KM398_24175 PF00156 Phosphoribosyl transferase domain KM398_24180 PF00781 Diacylglycerol kinase catalytic domain KM398_24200 PF00248 Aldo/keto reductase family KM398_24215 PF09335 SNARE associated Golgi protein KM398_24220 PF00398 Ribosomal RNA adenine dimethylase KM398_24225 PF02687 FtsX-like permease family KM398_24230 PF00005 ABC transporter KM398_24235 PF06445 GyrI-like small molecule binding domain KM398_24235 PF12833 Helix-turn-helix domain KM398_24240 PF00486 Transcriptional regulatory protein, C terminal KM398_24240 PF00072 Response regulator receiver domain KM398_24245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_24250 PF02687 FtsX-like permease family KM398_24260 PF02687 FtsX-like permease family KM398_24265 PF00005 ABC transporter KM398_24280 PF02447 GntP family permease KM398_24285 PF07702 UTRA domain KM398_24285 PF00392 Bacterial regulatory proteins, gntR family KM398_24295 PF07071 KDGP aldolase KM398_24300 PF03841 L-seryl-tRNA selenium transferase KM398_24305 PF01979 Amidohydrolase family KM398_24320 PF02557 D-alanyl-D-alanine carboxypeptidase KM398_24325 PF00512 His Kinase A (phospho-acceptor) domain KM398_24325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_24330 PF00072 Response regulator receiver domain KM398_24330 PF00486 Transcriptional regulatory protein, C terminal KM398_24335 PF13378 Enolase C-terminal domain-like KM398_24335 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KM398_24340 PF13193 AMP-binding enzyme C-terminal domain KM398_24340 PF00501 AMP-binding enzyme KM398_24345 PF00378 Enoyl-CoA hydratase/isomerase KM398_24350 PF00561 alpha/beta hydrolase fold KM398_24355 PF16582 Middle domain of thiamine pyrophosphate KM398_24355 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM398_24355 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM398_24360 PF00425 chorismate binding enzyme KM398_24365 PF01040 UbiA prenyltransferase family KM398_24370 PF01258 Prokaryotic dksA/traR C4-type zinc finger KM398_24375 PF00313 'Cold-shock' DNA-binding domain KM398_24390 PF00343 Carbohydrate phosphorylase KM398_24395 PF00534 Glycosyl transferases group 1 KM398_24395 PF08323 Starch synthase catalytic domain KM398_24400 PF00483 Nucleotidyl transferase KM398_24405 PF00483 Nucleotidyl transferase KM398_24410 PF00128 Alpha amylase, catalytic domain KM398_24410 PF02806 Alpha amylase, C-terminal all-beta domain KM398_24410 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KM398_24425 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KM398_24425 PF00056 lactate/malate dehydrogenase, NAD binding domain KM398_24520 PF05698 Bacterial trigger factor protein (TF) C-terminus KM398_24520 PF05697 Bacterial trigger factor protein (TF) KM398_24555 PF02308 MgtC family KM398_24560 PF07885 Ion channel KM398_24560 PF02254 TrkA-N domain KM398_24565 PF08868 YugN-like family KM398_24570 PF00342 Phosphoglucose isomerase KM398_24575 PF04070 Domain of unknown function (DUF378) KM398_24580 PF00575 S1 RNA binding domain KM398_24585 PF00155 Aminotransferase class I and II KM398_24590 PF01037 Lrp/AsnC ligand binding domain KM398_24595 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KM398_24595 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KM398_24600 PF08386 TAP-like protein KM398_24600 PF00561 alpha/beta hydrolase fold KM398_24610 PF00155 Aminotransferase class I and II KM398_24625 PF08810 Kinase associated protein B KM398_24630 PF00929 Exonuclease KM398_24635 PF03600 Citrate transporter KM398_24650 PF03129 Anticodon binding domain KM398_24650 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM398_24655 PF03061 Thioesterase superfamily KM398_24665 PF02632 BioY family KM398_24675 PF00483 Nucleotidyl transferase KM398_24680 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KM398_24680 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KM398_24680 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KM398_24680 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KM398_24685 PF10372 Bacterial membrane-spanning protein N-terminus KM398_24685 PF02457 DisA bacterial checkpoint controller nucleotide-binding KM398_24690 PF00883 Cytosol aminopeptidase family, catalytic domain KM398_24690 PF02789 Cytosol aminopeptidase family, N-terminal domain KM398_24695 PF06725 3D domain KM398_24705 PF00293 NUDIX domain KM398_24705 PF13344 Haloacid dehalogenase-like hydrolase KM398_24710 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM398_24715 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM398_24725 PF06445 GyrI-like small molecule binding domain KM398_24740 PF04463 Protein of unknown function (DUF523) KM398_24760 PF01521 Iron-sulphur cluster biosynthesis KM398_24765 PF01678 Diaminopimelate epimerase KM398_24770 PF07293 Protein of unknown function (DUF1450) KM398_24775 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM398_24785 PF00005 ABC transporter KM398_24785 PF09383 NIL domain KM398_24790 PF03649 Uncharacterised protein family (UPF0014) KM398_24795 PF03831 PhnA domain KM398_24795 PF08274 PhnA Zinc-Ribbon KM398_24830 PF13427 Domain of unknown function (DUF4111) KM398_24830 PF01909 Nucleotidyltransferase domain KM398_24835 PF07315 Protein of unknown function (DUF1462) KM398_24840 PF01106 NifU-like domain KM398_24855 PF04608 Phosphatidylglycerophosphatase A KM398_24865 PF02525 Flavodoxin-like fold KM398_24870 PF13344 Haloacid dehalogenase-like hydrolase KM398_24880 PF01934 Protein of unknown function DUF86 KM398_24885 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded KM398_24900 PF06265 Protein of unknown function (DUF1027) KM398_24905 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) KM398_24910 PF07739 TipAS antibiotic-recognition domain KM398_24910 PF13411 MerR HTH family regulatory protein KM398_24915 PF10086 YhfC intramembrane metalloprotease KM398_24935 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family KM398_24935 PF04055 Radical SAM superfamily KM398_24940 PF01551 Peptidase family M23 KM398_24950 PF08827 Domain of unknown function (DUF1805) KM398_24955 PF02872 5'-nucleotidase, C-terminal domain KM398_24960 PF03551 Transcriptional regulator PadR-like family KM398_24965 PF04892 VanZ like family KM398_24970 PF01458 Uncharacterized protein family (UPF0051) KM398_24975 PF01592 NifU-like N terminal domain KM398_24980 PF00266 Aminotransferase class-V KM398_24985 PF01458 Uncharacterized protein family (UPF0051) KM398_24990 PF00005 ABC transporter KM398_24995 PF03180 NLPA lipoprotein KM398_25000 PF03180 NLPA lipoprotein KM398_25005 PF00528 Binding-protein-dependent transport system inner membrane component KM398_25010 PF09383 NIL domain KM398_25010 PF00005 ABC transporter KM398_25020 PF00085 Thioredoxin KM398_25025 PF01751 Toprim domain KM398_25030 PF01597 Glycine cleavage H-protein KM398_25035 PF03960 ArsC family KM398_25080 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KM398_25080 PF00056 lactate/malate dehydrogenase, NAD binding domain KM398_25100 PF00440 Bacterial regulatory proteins, tetR family KM398_25100 PF13305 Tetracyclin repressor-like, C-terminal domain KM398_25105 PF00753 Metallo-beta-lactamase superfamily KM398_25110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM398_25110 PF02770 Acyl-CoA dehydrogenase, middle domain KM398_25110 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM398_25115 PF00108 Thiolase, N-terminal domain KM398_25115 PF02803 Thiolase, C-terminal domain KM398_25120 PF00378 Enoyl-CoA hydratase/isomerase KM398_25120 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KM398_25120 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KM398_25125 PF14115 YuzL-like protein KM398_25130 PF00768 D-alanyl-D-alanine carboxypeptidase KM398_25130 PF07943 Penicillin-binding protein 5, C-terminal domain KM398_25135 PF01619 Proline dehydrogenase KM398_25140 PF10835 Protein of unknown function (DUF2573) KM398_25145 PF01910 Thiamine-binding protein KM398_25150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM398_25150 PF00672 HAMP domain KM398_25150 PF02743 Cache domain KM398_25170 PF07690 Major Facilitator Superfamily KM398_25175 PF13520 Amino acid permease KM398_25185 PF02096 60Kd inner membrane protein KM398_25195 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM398_25195 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM398_25230 PF09335 SNARE associated Golgi protein KM398_25240 PF17969 L,D-transpeptidase C-terminal domain KM398_25240 PF03734 L,D-transpeptidase catalytic domain KM398_25245 PF00486 Transcriptional regulatory protein, C terminal KM398_25245 PF00072 Response regulator receiver domain KM398_25250 PF00989 PAS fold KM398_25250 PF16736 Single Cache-like KM398_25250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_25250 PF00512 His Kinase A (phospho-acceptor) domain KM398_25260 PF08264 Anticodon-binding domain of tRNA KM398_25260 PF09334 tRNA synthetases class I (M) KM398_25270 PF02743 Cache domain KM398_25270 PF00672 HAMP domain KM398_25270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM398_25275 PF01883 Iron-sulfur cluster assembly protein KM398_25280 PF02868 Thermolysin metallopeptidase, alpha-helical domain KM398_25280 PF01447 Thermolysin metallopeptidase, catalytic domain KM398_25280 PF07504 Fungalysin/Thermolysin Propeptide Motif KM398_25280 PF03413 Peptidase propeptide and YPEB domain KM398_25285 PF17954 Quercetinase C-terminal cupin domain KM398_25285 PF02678 Pirin KM398_25290 PF01047 MarR family KM398_25300 PF00999 Sodium/hydrogen exchanger family KM398_25305 PF02080 TrkA-C domain KM398_25310 PF01235 Sodium:alanine symporter family KM398_25315 PF00210 Ferritin-like domain KM398_25330 PF03641 Possible lysine decarboxylase KM398_25340 PF00210 Ferritin-like domain KM398_25350 PF01773 Na+ dependent nucleoside transporter N-terminus KM398_25350 PF07662 Na+ dependent nucleoside transporter C-terminus KM398_25355 PF01773 Na+ dependent nucleoside transporter N-terminus KM398_25355 PF07662 Na+ dependent nucleoside transporter C-terminus KM398_25360 PF01235 Sodium:alanine symporter family KM398_25365 PF01235 Sodium:alanine symporter family KM398_25370 PF13460 NAD(P)H-binding KM398_25385 PF00248 Aldo/keto reductase family KM398_25390 PF07690 Major Facilitator Superfamily KM398_25395 PF01638 HxlR-like helix-turn-helix KM398_25400 PF07849 Protein of unknown function (DUF1641) KM398_25405 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM398_25410 PF00579 tRNA synthetases class I (W and Y) KM398_25410 PF01479 S4 domain KM398_25415 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KM398_25415 PF01565 FAD binding domain KM398_25425 PF00672 HAMP domain KM398_25425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM398_25425 PF17202 Single cache domain 3 KM398_25435 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KM398_25440 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KM398_25455 PF13302 Acetyltransferase (GNAT) domain KM398_25460 PF06146 Phosphate-starvation-inducible E KM398_25475 PF00005 ABC transporter KM398_25480 PF01032 FecCD transport family KM398_25485 PF01032 FecCD transport family KM398_25495 PF00486 Transcriptional regulatory protein, C terminal KM398_25495 PF00072 Response regulator receiver domain KM398_25505 PF01668 SmpB protein KM398_25510 PF00773 RNB domain KM398_25510 PF17876 Cold shock domain KM398_25510 PF08206 Ribonuclease B OB domain KM398_25510 PF00575 S1 RNA binding domain KM398_25515 PF12146 Serine aminopeptidase, S33 KM398_25520 PF03840 Preprotein translocase SecG subunit KM398_25525 PF04172 LrgB-like family KM398_25530 PF03788 LrgA family KM398_25535 PF01156 Inosine-uridine preferring nucleoside hydrolase KM398_25625 PF04860 Phage portal protein KM398_25650 PF02899 Phage integrase, N-terminal SAM-like domain KM398_25650 PF00589 Phage integrase family KM398_25655 PF03952 Enolase, N-terminal domain KM398_25655 PF00113 Enolase, C-terminal TIM barrel domain KM398_25660 PF01676 Metalloenzyme superfamily KM398_25660 PF06415 BPG-independent PGAM N-terminus (iPGM_N) KM398_25665 PF00121 Triosephosphate isomerase KM398_25670 PF00162 Phosphoglycerate kinase KM398_25675 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KM398_25675 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KM398_25680 PF04198 Putative sugar-binding domain KM398_25690 PF04552 Sigma-54, DNA binding domain KM398_25690 PF00309 Sigma-54 factor, Activator interacting domain (AID) KM398_25690 PF04963 Sigma-54 factor, core binding domain KM398_25710 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KM398_25715 PF07451 Stage V sporulation protein AD (SpoVAD) KM398_25720 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KM398_25730 PF04239 Protein of unknown function (DUF421) KM398_25735 PF00574 Clp protease KM398_25740 PF00381 PTS HPr component phosphorylation site KM398_25745 PF02650 WhiA C-terminal HTH domain KM398_25745 PF14527 WhiA LAGLIDADG-like domain KM398_25745 PF10298 WhiA N-terminal LAGLIDADG-like domain KM398_25750 PF01933 Uncharacterised protein family UPF0052 KM398_25755 PF03668 P-loop ATPase protein family KM398_25760 PF00293 NUDIX domain KM398_25770 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM398_25780 PF14602 Hexapeptide repeat of succinyl-transferase KM398_25785 PF13419 Haloacid dehalogenase-like hydrolase KM398_25790 PF01790 Prolipoprotein diacylglyceryl transferase KM398_25795 PF07475 HPr Serine kinase C-terminal domain KM398_25795 PF02603 HPr Serine kinase N terminus KM398_25800 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV KM398_25810 PF00005 ABC transporter KM398_25810 PF17755 UvrA DNA-binding domain KM398_25810 PF17760 UvrA interaction domain KM398_25815 PF00271 Helicase conserved C-terminal domain KM398_25815 PF04851 Type III restriction enzyme, res subunit KM398_25815 PF12344 Ultra-violet resistance protein B KM398_25815 PF17757 UvrB interaction domain KM398_25815 PF02151 UvrB/uvrC motif KM398_25820 PF12323 Helix-turn-helix domain KM398_25820 PF07282 Putative transposase DNA-binding domain KM398_25820 PF01385 Probable transposase KM398_25835 PF07739 TipAS antibiotic-recognition domain KM398_25835 PF13411 MerR HTH family regulatory protein KM398_25860 PF03601 Conserved hypothetical protein 698 KM398_25865 PF03466 LysR substrate binding domain KM398_25865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM398_25870 PF13411 MerR HTH family regulatory protein KM398_25875 PF03358 NADPH-dependent FMN reductase KM398_25880 PF12848 ABC transporter KM398_25880 PF00005 ABC transporter KM398_25890 PF00664 ABC transporter transmembrane region KM398_25890 PF00005 ABC transporter KM398_25895 PF17820 PDZ domain KM398_25900 PF03572 Peptidase family S41 KM398_25900 PF01471 Putative peptidoglycan binding domain KM398_25900 PF17820 PDZ domain KM398_25905 PF18075 FtsX extracellular domain KM398_25905 PF02687 FtsX-like permease family KM398_25910 PF00005 ABC transporter KM398_25915 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KM398_25925 PF01043 SecA preprotein cross-linking domain KM398_25925 PF02810 SEC-C motif KM398_25925 PF07516 SecA Wing and Scaffold domain KM398_25925 PF07517 SecA DEAD-like domain KM398_25930 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KM398_25930 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus KM398_25935 PF00313 'Cold-shock' DNA-binding domain KM398_25945 PF04851 Type III restriction enzyme, res subunit KM398_25945 PF00271 Helicase conserved C-terminal domain KM398_25950 PF01476 LysM domain KM398_25950 PF00877 NlpC/P60 family KM398_25955 PF01638 HxlR-like helix-turn-helix KM398_25960 PF02645 Uncharacterised protein, DegV family COG1307 KM398_25965 PF09186 Domain of unknown function (DUF1949) KM398_25965 PF01205 Uncharacterized protein family UPF0029 KM398_25970 PF03816 Cell envelope-related transcriptional attenuator domain KM398_25975 PF02350 UDP-N-acetylglucosamine 2-epimerase KM398_25980 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM398_25980 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM398_25980 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM398_25985 PF00953 Glycosyl transferase family 4 KM398_25990 PF01522 Polysaccharide deacetylase KM398_25995 PF00874 PRD domain KM398_25995 PF03610 PTS system fructose IIA component KM398_25995 PF00158 Sigma-54 interaction domain KM398_26005 PF02417 Chromate transporter KM398_26010 PF04794 YdjC-like protein KM398_26015 PF02056 Family 4 glycosyl hydrolase KM398_26015 PF11975 Family 4 glycosyl hydrolase C-terminal domain KM398_26020 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KM398_26025 PF02378 Phosphotransferase system, EIIC KM398_26030 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KM398_26040 PF02675 S-adenosylmethionine decarboxylase KM398_26045 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KM398_26050 PF02378 Phosphotransferase system, EIIC KM398_26055 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KM398_26060 PF00375 Sodium:dicarboxylate symporter family KM398_26070 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM398_26080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM398_26080 PF03466 LysR substrate binding domain KM398_26100 PF01654 Cytochrome bd terminal oxidase subunit I KM398_26105 PF02322 Cytochrome bd terminal oxidase subunit II KM398_26110 PF02040 Arsenical pump membrane protein KM398_26115 PF01964 Radical SAM ThiC family KM398_26115 PF13667 ThiC-associated domain KM398_26130 PF09988 Uncharacterized metal-binding protein (DUF2227) KM398_26140 PF00884 Sulfatase KM398_26145 PF01063 Amino-transferase class IV KM398_26155 PF01773 Na+ dependent nucleoside transporter N-terminus KM398_26155 PF07662 Na+ dependent nucleoside transporter C-terminus KM398_26170 PF02028 BCCT, betaine/carnitine/choline family transporter KM398_26175 PF06725 3D domain KM398_26175 PF01476 LysM domain KM398_26200 PF04434 SWIM zinc finger KM398_26205 PF00176 SNF2 family N-terminal domain KM398_26205 PF00271 Helicase conserved C-terminal domain KM398_26205 PF12419 SNF2 Helicase protein KM398_26235 PF04542 Sigma-70 region 2 KM398_26235 PF04545 Sigma-70, region 4 KM398_26240 PF04893 Yip1 domain KM398_26245 PF02687 FtsX-like permease family KM398_26245 PF12704 MacB-like periplasmic core domain KM398_26250 PF00005 ABC transporter KM398_26270 PF07690 Major Facilitator Superfamily KM398_26285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_26285 PF00512 His Kinase A (phospho-acceptor) domain KM398_26285 PF16736 Single Cache-like KM398_26285 PF00989 PAS fold KM398_26290 PF00072 Response regulator receiver domain KM398_26290 PF00486 Transcriptional regulatory protein, C terminal KM398_26295 PF16363 GDP-mannose 4,6 dehydratase KM398_26300 PF03816 Cell envelope-related transcriptional attenuator domain KM398_26305 PF07977 FabA-like domain KM398_26310 PF02350 UDP-N-acetylglucosamine 2-epimerase KM398_26315 PF08239 Bacterial SH3 domain KM398_26315 PF00005 ABC transporter KM398_26320 PF01061 ABC-2 type transporter KM398_26325 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM398_26325 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM398_26325 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM398_26370 PF12116 Stage III sporulation protein D KM398_26385 PF01551 Peptidase family M23 KM398_26395 PF00005 ABC transporter KM398_26405 PF08486 Stage II sporulation protein KM398_26410 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KM398_26420 PF06612 Protein of unknown function (DUF1146) KM398_26425 PF00361 Proton-conducting membrane transporter KM398_26430 PF00361 Proton-conducting membrane transporter KM398_26435 PF00361 Proton-conducting membrane transporter KM398_26435 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KM398_26435 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus KM398_26440 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KM398_26445 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 KM398_26455 PF00146 NADH dehydrogenase KM398_26460 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit KM398_26465 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit KM398_26470 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit KM398_26475 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 KM398_26480 PF00563 EAL domain KM398_26480 PF00990 Diguanylate cyclase, GGDEF domain KM398_26480 PF03707 Bacterial signalling protein N terminal repeat KM398_26495 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain KM398_26495 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KM398_26500 PF02874 ATP synthase alpha/beta family, beta-barrel domain KM398_26500 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM398_26505 PF00231 ATP synthase KM398_26510 PF02874 ATP synthase alpha/beta family, beta-barrel domain KM398_26510 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM398_26510 PF00306 ATP synthase alpha/beta chain, C terminal domain KM398_26515 PF00213 ATP synthase delta (OSCP) subunit KM398_26520 PF00430 ATP synthase B/B' CF(0) KM398_26525 PF00137 ATP synthase subunit C KM398_26530 PF00119 ATP synthase A chain KM398_26535 PF03899 ATP synthase I chain KM398_26555 PF00464 Serine hydroxymethyltransferase KM398_26560 PF04260 Protein of unknown function (DUF436) KM398_26565 PF02502 Ribose/Galactose Isomerase KM398_26570 PF01451 Low molecular weight phosphotyrosine protein phosphatase KM398_26575 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KM398_26580 PF07681 DoxX KM398_26585 PF01613 Flavin reductase like domain KM398_26595 PF02659 Putative manganese efflux pump KM398_26600 PF01300 Telomere recombination KM398_26600 PF03481 Putative GTP-binding controlling metal-binding KM398_26610 PF09551 Stage II sporulation protein R (spore_II_R) KM398_26615 PF17827 PrmC N-terminal domain KM398_26615 PF13847 Methyltransferase domain KM398_26620 PF03462 PCRF domain KM398_26620 PF00472 RF-1 domain KM398_26625 PF00265 Thymidine kinase KM398_26630 PF01197 Ribosomal protein L31 KM398_26635 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM398_26635 PF07498 Rho termination factor, N-terminal domain KM398_26635 PF07497 Rho termination factor, RNA-binding domain KM398_26640 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded KM398_26645 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KM398_26650 PF01116 Fructose-bisphosphate aldolase class-II KM398_26655 PF00072 Response regulator receiver domain KM398_26660 PF10740 Domain of unknown function (DUF2529) KM398_26665 PF00117 Glutamine amidotransferase class-I KM398_26665 PF06418 CTP synthase N-terminus KM398_26670 PF05066 HB1, ASXL, restriction endonuclease HTH domain KM398_26680 PF02770 Acyl-CoA dehydrogenase, middle domain KM398_26680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM398_26680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM398_26685 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM398_26685 PF02770 Acyl-CoA dehydrogenase, middle domain KM398_26685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM398_26690 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KM398_26690 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KM398_26695 PF02803 Thiolase, C-terminal domain KM398_26695 PF00108 Thiolase, N-terminal domain KM398_26700 PF02754 Cysteine-rich domain KM398_26700 PF13183 4Fe-4S dicluster domain KM398_26705 PF13091 PLD-like domain KM398_26710 PF03851 UV-endonuclease UvdE KM398_26715 PF00990 Diguanylate cyclase, GGDEF domain KM398_26715 PF00563 EAL domain KM398_26715 PF03707 Bacterial signalling protein N terminal repeat KM398_26735 PF00196 Bacterial regulatory proteins, luxR family KM398_26735 PF00072 Response regulator receiver domain KM398_26740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_26740 PF07730 Histidine kinase KM398_26750 PF00005 ABC transporter KM398_26755 PF00557 Metallopeptidase family M24 KM398_26765 PF02225 PA domain KM398_26765 PF04389 Peptidase family M28 KM398_26785 PF04542 Sigma-70 region 2 KM398_26785 PF08281 Sigma-70, region 4 KM398_26790 PF03485 Arginyl tRNA synthetase N terminal domain KM398_26790 PF05746 DALR anticodon binding domain KM398_26790 PF00750 tRNA synthetases class I (R) KM398_26795 PF09148 Domain of unknown function (DUF1934) KM398_26800 PF02016 LD-carboxypeptidase N-terminal domain KM398_26800 PF17676 LD-carboxypeptidase C-terminal domain KM398_26815 PF00491 Arginase family KM398_26820 PF17284 Spermidine synthase tetramerisation domain KM398_26825 PF07690 Major Facilitator Superfamily KM398_26830 PF13411 MerR HTH family regulatory protein KM398_26835 PF03009 Glycerophosphoryl diester phosphodiesterase family KM398_26840 PF00912 Transglycosylase KM398_26840 PF00905 Penicillin binding protein transpeptidase domain KM398_26845 PF08741 YwhD family KM398_26850 PF02163 Peptidase family M50 KM398_26855 PF01361 Tautomerase enzyme KM398_26860 PF01966 HD domain KM398_26865 PF01497 Periplasmic binding protein KM398_26870 PF00005 ABC transporter KM398_26875 PF01032 FecCD transport family KM398_26885 PF07293 Protein of unknown function (DUF1450) KM398_26900 PF03099 Biotin/lipoate A/B protein ligase family KM398_26905 PF01515 Phosphate acetyl/butaryl transferase KM398_26910 PF06778 Chlorite dismutase KM398_26915 PF00768 D-alanyl-D-alanine carboxypeptidase KM398_26915 PF07943 Penicillin-binding protein 5, C-terminal domain KM398_26920 PF07486 Cell Wall Hydrolase KM398_26925 PF09671 Spore coat protein (Spore_GerQ) KM398_26930 PF04241 Protein of unknown function (DUF423) KM398_26940 PF07885 Ion channel KM398_26940 PF02254 TrkA-N domain KM398_26945 PF00860 Permease family KM398_26955 PF12823 Domain of unknown function (DUF3817) KM398_26960 PF03167 Uracil DNA glycosylase superfamily KM398_26965 PF12679 ABC-2 family transporter protein KM398_26970 PF00005 ABC transporter KM398_26975 PF13472 GDSL-like Lipase/Acylhydrolase family KM398_26980 PF00356 Bacterial regulatory proteins, lacI family KM398_26980 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KM398_26990 PF03447 Homoserine dehydrogenase, NAD binding domain KM398_26990 PF00742 Homoserine dehydrogenase KM398_26990 PF01842 ACT domain KM398_26995 PF04204 Homoserine O-succinyltransferase KM398_27000 PF01053 Cys/Met metabolism PLP-dependent enzyme KM398_27010 PF13419 Haloacid dehalogenase-like hydrolase KM398_27015 PF00027 Cyclic nucleotide-binding domain KM398_27020 PF02525 Flavodoxin-like fold KM398_27025 PF00072 Response regulator receiver domain KM398_27025 PF00196 Bacterial regulatory proteins, luxR family KM398_27035 PF08543 Phosphomethylpyrimidine kinase KM398_27040 PF07694 5TMR of 5TMR-LYT KM398_27040 PF00990 Diguanylate cyclase, GGDEF domain KM398_27045 PF04328 Selenoprotein, putative KM398_27050 PF13722 5TM C-terminal transporter carbon starvation CstA KM398_27050 PF02554 Carbon starvation protein CstA KM398_27055 PF04397 LytTr DNA-binding domain KM398_27055 PF00072 Response regulator receiver domain KM398_27060 PF07690 Major Facilitator Superfamily KM398_27065 PF03808 Glycosyl transferase WecB/TagA/CpsF family KM398_27080 PF03458 UPF0126 domain KM398_27085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM398_27095 PF03061 Thioesterase superfamily KM398_27105 PF00535 Glycosyl transferase family 2 KM398_27110 PF00005 ABC transporter KM398_27110 PF12848 ABC transporter KM398_27130 PF00535 Glycosyl transferase family 2 KM398_27135 PF00440 Bacterial regulatory proteins, tetR family KM398_27140 PF00873 AcrB/AcrD/AcrF family KM398_27145 PF01641 SelR domain KM398_27145 PF01625 Peptide methionine sulfoxide reductase KM398_27150 PF01594 AI-2E family transporter KM398_27155 PF04172 LrgB-like family KM398_27160 PF03788 LrgA family KM398_27165 PF00072 Response regulator receiver domain KM398_27165 PF04397 LytTr DNA-binding domain KM398_27170 PF07694 5TMR of 5TMR-LYT KM398_27170 PF13492 GAF domain KM398_27170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_27170 PF06580 Histidine kinase KM398_27175 PF07690 Major Facilitator Superfamily KM398_27180 PF02028 BCCT, betaine/carnitine/choline family transporter KM398_27185 PF02898 Nitric oxide synthase, oxygenase domain KM398_27190 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KM398_27190 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KM398_27200 PF02293 AmiS/UreI family transporter KM398_27210 PF16363 GDP-mannose 4,6 dehydratase KM398_27215 PF03006 Haemolysin-III related KM398_27225 PF00270 DEAD/DEAH box helicase KM398_27225 PF00271 Helicase conserved C-terminal domain KM398_27225 PF03880 DbpA RNA binding domain KM398_27235 PF00478 IMP dehydrogenase / GMP reductase domain KM398_27240 PF08439 Oligopeptidase F KM398_27240 PF01432 Peptidase family M3 KM398_27250 PF02590 Predicted SPOUT methyltransferase KM398_27260 PF13180 PDZ domain KM398_27265 PF00753 Metallo-beta-lactamase superfamily KM398_27270 PF09648 YycH protein KM398_27275 PF07435 YycH protein KM398_27280 PF00672 HAMP domain KM398_27280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM398_27280 PF00512 His Kinase A (phospho-acceptor) domain KM398_27280 PF13426 PAS domain KM398_27285 PF00072 Response regulator receiver domain KM398_27285 PF00486 Transcriptional regulatory protein, C terminal KM398_27310 PF00709 Adenylosuccinate synthetase KM398_27315 PF03796 DnaB-like helicase C terminal domain KM398_27315 PF00772 DnaB-like helicase N terminal domain KM398_27320 PF01281 Ribosomal protein L9, N-terminal domain KM398_27320 PF03948 Ribosomal protein L9, C-terminal domain KM398_27325 PF02272 DHHA1 domain KM398_27325 PF01368 DHH family KM398_27330 PF09991 Predicted membrane protein (DUF2232) KM398_27335 PF01084 Ribosomal protein S18 KM398_27340 PF00436 Single-strand binding protein family KM398_27345 PF01250 Ribosomal protein S6 KM398_27350 PF01926 50S ribosome-binding GTPase KM398_27350 PF06071 Protein of unknown function (DUF933) KM398_27355 PF06107 Bacterial protein of unknown function (DUF951) KM398_27360 PF00924 Mechanosensitive ion channel KM398_27365 PF06866 Protein of unknown function (DUF1256) KM398_27370 PF17762 HTH domain found in ParB protein KM398_27370 PF02195 ParB-like nuclease domain KM398_27375 PF13614 AAA domain KM398_27380 PF17762 HTH domain found in ParB protein KM398_27380 PF02195 ParB-like nuclease domain KM398_27385 PF02527 rRNA small subunit methyltransferase G KM398_27390 PF13932 GidA associated domain KM398_27390 PF01134 Glucose inhibited division protein A KM398_27395 PF12631 MnmE helical domain KM398_27395 PF01926 50S ribosome-binding GTPase KM398_27395 PF10396 GTP-binding protein TrmE N-terminus KM398_27400 PF14804 Jag N-terminus KM398_27400 PF01424 R3H domain KM398_27405 PF02096 60Kd inner membrane protein KM398_27410 PF00825 Ribonuclease P KM398_27415 PF00468 Ribosomal protein L34 KM398_27425 PF08378 Nuclease-related domain KM398_27465 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) KM398_27545 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) KM398_27590 PF13427 Domain of unknown function (DUF4111) KM398_27590 PF18765 Polymerase beta, Nucleotidyltransferase KM398_27615 PF01609 Transposase DDE domain KM398_27620 PF01609 Transposase DDE domain KM398_27645 PF13491 4TM region of DNA translocase FtsK/SpoIIIE KM398_27645 PF17854 FtsK alpha domain KM398_27645 PF09397 Ftsk gamma domain KM398_27645 PF01580 FtsK/SpoIIIE family KM398_27660 PF00091 Tubulin/FtsZ family, GTPase domain KM398_27735 PF00437 Type II/IV secretion system protein KM398_27855 PF10087 Uncharacterized protein conserved in bacteria (DUF2325) KM398_27870 PF04235 Protein of unknown function (DUF418) KM398_27895 PF00395 S-layer homology domain KM398_27900 PF01569 PAP2 superfamily KM398_27915 PF00535 Glycosyl transferase family 2 KM398_27920 PF00483 Nucleotidyl transferase KM398_27925 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM398_27925 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM398_27925 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM398_27970 PF03497 Anthrax toxin LF subunit KM398_27970 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain KM398_27990 PF00874 PRD domain KM398_27990 PF05043 Mga helix-turn-helix domain KM398_27990 PF08279 HTH domain KM398_27995 PF09385 Histidine kinase N terminal KM398_28010 PF13700 Domain of unknown function (DUF4158) KM398_28010 PF01526 Tn3 transposase DDE domain KM398_28015 PF02796 Helix-turn-helix domain of resolvase KM398_28015 PF00239 Resolvase, N terminal domain KM398_28020 PF03845 Spore germination protein KM398_28025 PF03323 Bacillus/Clostridium GerA spore germination protein KM398_28030 PF05504 Spore germination B3/ GerAC like, C-terminal KM398_28045 PF17476 Clostridial binary toxin B/anthrax toxin PA domain 3 KM398_28045 PF03495 Clostridial binary toxin B/anthrax toxin PA Ca-binding domain KM398_28045 PF07691 PA14 domain KM398_28045 PF17475 Clostridial binary toxin B/anthrax toxin PA domain 2 KM398_28050 PF01022 Bacterial regulatory protein, arsR family KM398_28075 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain KM398_28075 PF09156 Anthrax toxin lethal factor, middle domain KM398_28095 PF18277 AbrB C-terminal domain KM398_28095 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KM398_28105 PF00589 Phage integrase family KM398_28105 PF02899 Phage integrase, N-terminal SAM-like domain KM398_28135 PF14436 Bacterial EndoU nuclease KM398_28135 PF04740 LXG domain of WXG superfamily KM398_28160 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment KM398_28170 PF00589 Phage integrase family KM398_28195 PF18801 response regulator aspartate phosphatase H, N terminal KM398_28205 PF17209 Hfq protein KM398_28210 PF01022 Bacterial regulatory protein, arsR family KM398_28215 PF02600 Disulfide bond formation protein DsbB KM398_28230 PF00565 Staphylococcal nuclease homologue KM398_28235 PF01131 DNA topoisomerase KM398_28235 PF01751 Toprim domain KM398_28235 PF13342 C-terminal repeat of topoisomerase KM398_28245 PF08708 Primase C terminal 1 (PriCT-1) KM398_28265 PF17362 Family of unknown function KM398_28280 PF17631 Family of unknown function (DUF5512) KM398_28320 PF00437 Type II/IV secretion system protein KM398_28350 PF04956 TrbC/VIRB2 family KM398_28365 PF12696 TraM recognition site of TraD and TraG KM398_28400 PF00877 NlpC/P60 family KM398_28410 PF17632 Family of unknown function (DUF5513) KM398_28435 PF17633 Family of unknown function (DUF5514) KM398_28440 PF17630 Family of unknown function (DUF5511) KM398_28445 PF18840 Large polyvalent protein associated domain 25 KM398_28460 PF13154 Protein of unknown function (DUF3991) KM398_28465 PF01131 DNA topoisomerase KM398_28465 PF01751 Toprim domain KM398_28505 PF17443 Uncharacterized protein pXO2-72 KM398_28525 PF11798 IMS family HHH motif KM398_28525 PF00817 impB/mucB/samB family KM398_28525 PF11799 impB/mucB/samB family C-terminal domain KM398_28530 PF13152 Protein of unknown function (DUF3967) KM398_28530 PF13411 MerR HTH family regulatory protein KM398_28535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM398_28565 PF00874 PRD domain KM398_28565 PF05043 Mga helix-turn-helix domain KM398_28565 PF08280 M protein trans-acting positive regulator (MGA) HTH domain KM398_28575 PF01810 LysE type translocator KM398_28580 PF00874 PRD domain KM398_28580 PF05043 Mga helix-turn-helix domain KM398_28580 PF08279 HTH domain KM398_28585 PF00874 PRD domain KM398_28585 PF05043 Mga helix-turn-helix domain KM398_28585 PF08279 HTH domain KM398_28590 PF09385 Histidine kinase N terminal KM398_28600 PF10502 Signal peptidase, peptidase S26 KM398_28615 PF01022 Bacterial regulatory protein, arsR family KM398_28625 PF08245 Mur ligase middle domain KM398_28630 PF14102 Capsule biosynthesis CapC KM398_28635 PF09587 Bacterial capsule synthesis protein PGA_cap KM398_28655 PF08280 M protein trans-acting positive regulator (MGA) HTH domain KM398_28655 PF05043 Mga helix-turn-helix domain KM398_28665 PF01569 PAP2 superfamily KM398_28675 PF00440 Bacterial regulatory proteins, tetR family KM398_28680 PF04463 Protein of unknown function (DUF523) KM398_28685 PF02517 CPBP intramembrane metalloprotease KM398_28690 PF01906 Putative heavy-metal-binding KM398_28705 PF01520 N-acetylmuramoyl-L-alanine amidase KM398_28705 PF00395 S-layer homology domain KM398_28720 PF13614 AAA domain