locus-tag class description BF31_1 PF00486 Transcriptional regulatory protein, C terminal BF31_1 PF00072 Response regulator receiver domain BF31_100 PF00149 Calcineurin-like phosphoesterase BF31_1000 PF02595 Glycerate kinase family BF31_1001 PF02595 Glycerate kinase family BF31_1016 PF01522 Polysaccharide deacetylase BF31_1017 PF14089 KinB-signalling pathway activation in sporulation BF31_1018 PF17898 Spore germination GerD central core domain BF31_1019 PF10609 NUBPL iron-transfer P-loop NTPase BF31_1020 PF01520 N-acetylmuramoyl-L-alanine amidase BF31_1022 PF00380 Ribosomal protein S9/S16 BF31_1023 PF00572 Ribosomal protein L13 BF31_1024 PF01416 tRNA pseudouridine synthase BF31_1025 PF02361 Cobalt transport protein BF31_1026 PF00005 ABC transporter BF31_1027 PF00005 ABC transporter BF31_1028 PF01196 Ribosomal protein L17 BF31_1029 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BF31_1029 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BF31_1029 PF01000 RNA polymerase Rpb3/RpoA insert domain BF31_103 PF11121 Protein of unknown function (DUF2639) BF31_1030 PF00411 Ribosomal protein S11 BF31_1031 PF00416 Ribosomal protein S13/S18 BF31_1032 PF00444 Ribosomal protein L36 BF31_1033 PF01176 Translation initiation factor 1A / IF-1 BF31_1034 PF00557 Metallopeptidase family M24 BF31_1035 PF05191 Adenylate kinase, active site lid BF31_1036 PF00344 SecY translocase BF31_1037 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BF31_1038 PF00327 Ribosomal protein L30p/L7e BF31_1039 PF00333 Ribosomal protein S5, N-terminal domain BF31_1039 PF03719 Ribosomal protein S5, C-terminal domain BF31_104 PF00107 Zinc-binding dehydrogenase BF31_104 PF08240 Alcohol dehydrogenase GroES-like domain BF31_1040 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BF31_1041 PF00347 Ribosomal protein L6 BF31_1042 PF00410 Ribosomal protein S8 BF31_1043 PF00253 Ribosomal protein S14p/S29e BF31_1044 PF00281 Ribosomal protein L5 BF31_1044 PF00673 ribosomal L5P family C-terminus BF31_1045 PF00467 KOW motif BF31_1045 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BF31_1046 PF00238 Ribosomal protein L14p/L23e BF31_1047 PF00366 Ribosomal protein S17 BF31_1048 PF00831 Ribosomal L29 protein BF31_1049 PF00252 Ribosomal protein L16p/L10e BF31_1050 PF07650 KH domain BF31_1050 PF00189 Ribosomal protein S3, C-terminal domain BF31_1051 PF00237 Ribosomal protein L22p/L17e BF31_1052 PF00203 Ribosomal protein S19 BF31_1053 PF00181 Ribosomal Proteins L2, RNA binding domain BF31_1053 PF03947 Ribosomal Proteins L2, C-terminal domain BF31_1054 PF00276 Ribosomal protein L23 BF31_1055 PF00573 Ribosomal protein L4/L1 family BF31_1056 PF00297 Ribosomal protein L3 BF31_1057 PF00338 Ribosomal protein S10p/S20e BF31_1058 PF03143 Elongation factor Tu C-terminal domain BF31_1058 PF00009 Elongation factor Tu GTP binding domain BF31_1058 PF03144 Elongation factor Tu domain 2 BF31_1059 PF00009 Elongation factor Tu GTP binding domain BF31_1059 PF03144 Elongation factor Tu domain 2 BF31_1059 PF00679 Elongation factor G C-terminus BF31_1059 PF03764 Elongation factor G, domain IV BF31_1059 PF14492 Elongation Factor G, domain II BF31_106 PF01906 Putative heavy-metal-binding BF31_1060 PF00177 Ribosomal protein S7p/S5e BF31_1061 PF00164 Ribosomal protein S12/S23 BF31_1062 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BF31_1063 PF04998 RNA polymerase Rpb1, domain 5 BF31_1063 PF04997 RNA polymerase Rpb1, domain 1 BF31_1063 PF04983 RNA polymerase Rpb1, domain 3 BF31_1063 PF05000 RNA polymerase Rpb1, domain 4 BF31_1063 PF00623 RNA polymerase Rpb1, domain 2 BF31_1064 PF04563 RNA polymerase beta subunit BF31_1064 PF04561 RNA polymerase Rpb2, domain 2 BF31_1064 PF04565 RNA polymerase Rpb2, domain 3 BF31_1064 PF04560 RNA polymerase Rpb2, domain 7 BF31_1064 PF10385 RNA polymerase beta subunit external 1 domain BF31_1064 PF00562 RNA polymerase Rpb2, domain 6 BF31_1065 PF05175 Methyltransferase small domain BF31_1066 PF00542 Ribosomal protein L7/L12 C-terminal domain BF31_1066 PF16320 Ribosomal protein L7/L12 dimerisation domain BF31_1067 PF00466 Ribosomal protein L10 BF31_1068 PF00687 Ribosomal protein L1p/L10e family BF31_1069 PF00298 Ribosomal protein L11, RNA binding domain BF31_1069 PF03946 Ribosomal protein L11, N-terminal domain BF31_1070 PF00467 KOW motif BF31_1070 PF02357 Transcription termination factor nusG BF31_1071 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BF31_1072 PF04542 Sigma-70 region 2 BF31_1072 PF08281 Sigma-70, region 4 BF31_1073 PF05991 YacP-like NYN domain BF31_1076 PF00636 Ribonuclease III domain BF31_1077 PF01406 tRNA synthetases class I (C) catalytic domain BF31_1077 PF09190 DALR domain BF31_1078 PF00132 Bacterial transferase hexapeptide (six repeats) BF31_1078 PF06426 Serine acetyltransferase, N-terminal BF31_1079 PF00749 tRNA synthetases class I (E and Q), catalytic domain BF31_1080 PF02542 YgbB family BF31_1081 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BF31_1083 PF10635 DisA bacterial checkpoint controller linker region BF31_1083 PF02457 DisA bacterial checkpoint controller nucleotide-binding BF31_1084 PF18073 Rubredoxin metal binding domain BF31_1085 PF10431 C-terminal, D2-small domain, of ClpB protein BF31_1085 PF07724 AAA domain (Cdc48 subfamily) BF31_1085 PF02861 Clp amino terminal domain, pathogenicity island component BF31_1085 PF00004 ATPase family associated with various cellular activities (AAA) BF31_1085 PF17871 AAA lid domain BF31_1086 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain BF31_1087 PF02151 UvrB/uvrC motif BF31_1088 PF17727 CtsR C-terminal dimerization domain BF31_1088 PF05848 CtsR N-terminal HTH domain BF31_1093 PF01336 OB-fold nucleic acid binding domain BF31_1093 PF00152 tRNA synthetases class II (D, K and N) BF31_1094 PF01207 Dihydrouridine synthase (Dus) BF31_1095 PF01381 Helix-turn-helix BF31_1096 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BF31_1097 PF02152 Dihydroneopterin aldolase BF31_1098 PF00809 Pterin binding enzyme BF31_1099 PF01063 Amino-transferase class IV BF31_11 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BF31_1100 PF00117 Glutamine amidotransferase class-I BF31_1101 PF00425 chorismate binding enzyme BF31_1101 PF04715 Anthranilate synthase component I, N terminal region BF31_1102 PF00291 Pyridoxal-phosphate dependent enzyme BF31_1103 PF01430 Hsp33 protein BF31_1104 PF03309 Type III pantothenate kinase BF31_1105 PF01434 Peptidase family M41 BF31_1105 PF06480 FtsH Extracellular BF31_1105 PF17862 AAA+ lid domain BF31_1105 PF00004 ATPase family associated with various cellular activities (AAA) BF31_1107 PF01171 PP-loop family BF31_1107 PF09179 TilS substrate binding domain BF31_1107 PF11734 TilS substrate C-terminal domain BF31_1108 PF07228 Stage II sporulation protein E (SpoIIE) BF31_111 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_111 PF00072 Response regulator receiver domain BF31_111 PF01627 Hpt domain BF31_111 PF00497 Bacterial extracellular solute-binding proteins, family 3 BF31_111 PF00512 His Kinase A (phospho-acceptor) domain BF31_1111 PF00575 S1 RNA binding domain BF31_1113 PF09578 Spore cortex protein YabQ (Spore_YabQ) BF31_1114 PF07873 YabP family BF31_1115 PF01479 S4 domain BF31_1116 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BF31_1116 PF03819 MazG nucleotide pyrophosphohydrolase domain BF31_1117 PF01943 Polysaccharide biosynthesis protein BF31_1117 PF14667 Polysaccharide biosynthesis C-terminal domain BF31_1118 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BF31_1118 PF15714 Stage V sporulation protein T C-terminal, transcription factor BF31_1119 PF17757 UvrB interaction domain BF31_1119 PF03461 TRCF domain BF31_1119 PF00271 Helicase conserved C-terminal domain BF31_1119 PF00270 DEAD/DEAH box helicase BF31_1119 PF02559 CarD-like/TRCF domain BF31_112 PF03705 CheR methyltransferase, all-alpha domain BF31_112 PF01739 CheR methyltransferase, SAM binding domain BF31_1121 PF01195 Peptidyl-tRNA hydrolase BF31_1122 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BF31_1122 PF14572 Phosphoribosyl synthetase-associated domain BF31_1123 PF00132 Bacterial transferase hexapeptide (six repeats) BF31_1123 PF00483 Nucleotidyl transferase BF31_1124 PF04026 SpoVG BF31_1125 PF01042 Endoribonuclease L-PSP BF31_1126 PF00156 Phosphoribosyl transferase domain BF31_1126 PF09182 Bacterial purine repressor, N-terminal BF31_1127 PF08544 GHMP kinases C terminal BF31_1127 PF00288 GHMP kinases N terminal domain BF31_1128 PF00269 Small, acid-soluble spore proteins, alpha/beta type BF31_1129 PF06257 Biofilm formation stimulator VEG BF31_113 PF07228 Stage II sporulation protein E (SpoIIE) BF31_113 PF13426 PAS domain BF31_1130 PF05582 YabG peptidase U57 BF31_1131 PF00398 Ribosomal RNA adenine dimethylase BF31_1132 PF13662 Toprim domain BF31_1132 PF13331 Domain of unknown function (DUF4093) BF31_1133 PF01026 TatD related DNase BF31_1134 PF08264 Anticodon-binding domain of tRNA BF31_1134 PF09334 tRNA synthetases class I (M) BF31_1134 PF01588 Putative tRNA binding domain BF31_1135 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BF31_1135 PF18277 AbrB C-terminal domain BF31_1136 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BF31_1137 PF01541 GIY-YIG catalytic domain BF31_1138 PF05175 Methyltransferase small domain BF31_1139 PF06156 Initiation control protein YabA BF31_1140 PF04468 PSP1 C-terminal conserved region BF31_1141 PF09115 DNA polymerase III, delta subunit, C terminal BF31_1142 PF02223 Thymidylate kinase BF31_1143 PF01276 Orn/Lys/Arg decarboxylase, major domain BF31_1143 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BF31_115 PF04545 Sigma-70, region 4 BF31_115 PF04539 Sigma-70 region 3 BF31_115 PF04542 Sigma-70 region 2 BF31_1151 PF07441 SigmaK-factor processing regulatory protein BofA BF31_1152 PF10704 Protein of unknown function (DUF2508) BF31_1153 PF02132 RecR protein BF31_1153 PF13662 Toprim domain BF31_1154 PF02575 YbaB/EbfC DNA-binding family BF31_1155 PF12169 DNA polymerase III subunits gamma and tau domain III BF31_1156 PF14437 MafB19-like deaminase BF31_1157 PF00857 Isochorismatase family BF31_1158 PF01712 Deoxynucleoside kinase BF31_1159 PF01712 Deoxynucleoside kinase BF31_116 PF13581 Histidine kinase-like ATPase domain BF31_1162 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BF31_1162 PF02403 Seryl-tRNA synthetase N-terminal domain BF31_1163 PF01174 SNO glutamine amidotransferase family BF31_1164 PF01680 SOR/SNZ family BF31_1165 PF00768 D-alanyl-D-alanine carboxypeptidase BF31_1165 PF07943 Penicillin-binding protein 5, C-terminal domain BF31_1166 PF00571 CBS domain BF31_1166 PF00478 IMP dehydrogenase / GMP reductase domain BF31_117 PF01740 STAS domain BF31_1175 PF03989 DNA gyrase C-terminal domain, beta-propeller BF31_1175 PF00521 DNA gyrase/topoisomerase IV, subunit A BF31_1176 PF01751 Toprim domain BF31_1176 PF00986 DNA gyrase B subunit, carboxyl terminus BF31_1176 PF00204 DNA gyrase B BF31_1176 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_1177 PF02463 RecF/RecN/SMC N terminal domain BF31_1179 PF00712 DNA polymerase III beta subunit, N-terminal domain BF31_1179 PF02768 DNA polymerase III beta subunit, C-terminal domain BF31_1179 PF02767 DNA polymerase III beta subunit, central domain BF31_1180 PF08299 Bacterial dnaA protein helix-turn-helix BF31_1180 PF11638 DnaA N-terminal domain BF31_1180 PF00308 Bacterial dnaA protein BF31_1181 PF00468 Ribosomal protein L34 BF31_1182 PF00825 Ribonuclease P BF31_1183 PF02096 60Kd inner membrane protein BF31_1184 PF01424 R3H domain BF31_1184 PF14804 Jag N-terminus BF31_1185 PF12631 MnmE helical domain BF31_1185 PF10396 GTP-binding protein TrmE N-terminus BF31_1185 PF01926 50S ribosome-binding GTPase BF31_1186 PF01134 Glucose inhibited division protein A BF31_1186 PF13932 GidA associated domain BF31_1187 PF02527 rRNA small subunit methyltransferase G BF31_1188 PF17762 HTH domain found in ParB protein BF31_1188 PF02195 ParB-like nuclease domain BF31_1189 PF13614 AAA domain BF31_1190 PF17762 HTH domain found in ParB protein BF31_1190 PF02195 ParB-like nuclease domain BF31_1191 PF06866 Protein of unknown function (DUF1256) BF31_1192 PF00924 Mechanosensitive ion channel BF31_1193 PF06107 Bacterial protein of unknown function (DUF951) BF31_1194 PF01926 50S ribosome-binding GTPase BF31_1194 PF06071 Protein of unknown function (DUF933) BF31_1195 PF01250 Ribosomal protein S6 BF31_1196 PF00436 Single-strand binding protein family BF31_1197 PF01084 Ribosomal protein S18 BF31_1198 PF09991 Predicted membrane protein (DUF2232) BF31_1199 PF01368 DHH family BF31_1199 PF02272 DHHA1 domain BF31_120 PF05532 CsbD-like BF31_1200 PF01281 Ribosomal protein L9, N-terminal domain BF31_1200 PF03948 Ribosomal protein L9, C-terminal domain BF31_1201 PF00772 DnaB-like helicase N terminal domain BF31_1201 PF03796 DnaB-like helicase C terminal domain BF31_1202 PF00709 Adenylosuccinate synthetase BF31_1207 PF00486 Transcriptional regulatory protein, C terminal BF31_1207 PF00072 Response regulator receiver domain BF31_1208 PF13426 PAS domain BF31_1208 PF00512 His Kinase A (phospho-acceptor) domain BF31_1208 PF00672 HAMP domain BF31_1208 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_1209 PF07435 YycH protein BF31_121 PF11181 Heat induced stress protein YflT BF31_1210 PF09648 YycH protein BF31_1211 PF00753 Metallo-beta-lactamase superfamily BF31_1212 PF13180 PDZ domain BF31_1214 PF02590 Predicted SPOUT methyltransferase BF31_1216 PF01432 Peptidase family M3 BF31_1216 PF08439 Oligopeptidase F BF31_1217 PF00478 IMP dehydrogenase / GMP reductase domain BF31_1219 PF03880 DbpA RNA binding domain BF31_1219 PF00271 Helicase conserved C-terminal domain BF31_1219 PF00270 DEAD/DEAH box helicase BF31_1221 PF03006 Haemolysin-III related BF31_1222 PF16363 GDP-mannose 4,6 dehydratase BF31_1224 PF02293 AmiS/UreI family transporter BF31_1226 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BF31_1226 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BF31_1227 PF02898 Nitric oxide synthase, oxygenase domain BF31_1228 PF02028 BCCT, betaine/carnitine/choline family transporter BF31_1229 PF07690 Major Facilitator Superfamily BF31_1230 PF07694 5TMR of 5TMR-LYT BF31_1230 PF13492 GAF domain BF31_1230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_1230 PF06580 Histidine kinase BF31_1231 PF04397 LytTr DNA-binding domain BF31_1231 PF00072 Response regulator receiver domain BF31_1232 PF03788 LrgA family BF31_1233 PF04172 LrgB-like family BF31_1234 PF01594 AI-2E family transporter BF31_1235 PF01641 SelR domain BF31_1235 PF01625 Peptide methionine sulfoxide reductase BF31_1236 PF00873 AcrB/AcrD/AcrF family BF31_1237 PF00440 Bacterial regulatory proteins, tetR family BF31_1238 PF00535 Glycosyl transferase family 2 BF31_1243 PF12848 ABC transporter BF31_1243 PF00005 ABC transporter BF31_1244 PF00535 Glycosyl transferase family 2 BF31_1246 PF03061 Thioesterase superfamily BF31_1248 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF31_1249 PF03458 UPF0126 domain BF31_125 PF00395 S-layer homology domain BF31_1252 PF03808 Glycosyl transferase WecB/TagA/CpsF family BF31_1253 PF07690 Major Facilitator Superfamily BF31_1254 PF00072 Response regulator receiver domain BF31_1254 PF04397 LytTr DNA-binding domain BF31_1255 PF02554 Carbon starvation protein CstA BF31_1255 PF13722 5TM C-terminal transporter carbon starvation CstA BF31_1256 PF04328 Selenoprotein, putative BF31_1257 PF00990 Diguanylate cyclase, GGDEF domain BF31_1257 PF07694 5TMR of 5TMR-LYT BF31_1258 PF08543 Phosphomethylpyrimidine kinase BF31_1259 PF07730 Histidine kinase BF31_1259 PF13185 GAF domain BF31_1260 PF13185 GAF domain BF31_1260 PF07730 Histidine kinase BF31_1261 PF00196 Bacterial regulatory proteins, luxR family BF31_1261 PF00072 Response regulator receiver domain BF31_1262 PF02525 Flavodoxin-like fold BF31_1263 PF00027 Cyclic nucleotide-binding domain BF31_1264 PF13419 Haloacid dehalogenase-like hydrolase BF31_1266 PF01053 Cys/Met metabolism PLP-dependent enzyme BF31_1267 PF04204 Homoserine O-succinyltransferase BF31_1268 PF00742 Homoserine dehydrogenase BF31_1268 PF01842 ACT domain BF31_1268 PF03447 Homoserine dehydrogenase, NAD binding domain BF31_1270 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BF31_1270 PF00356 Bacterial regulatory proteins, lacI family BF31_1271 PF13472 GDSL-like Lipase/Acylhydrolase family BF31_1272 PF00005 ABC transporter BF31_1273 PF12679 ABC-2 family transporter protein BF31_1274 PF03167 Uracil DNA glycosylase superfamily BF31_1275 PF12823 Domain of unknown function (DUF3817) BF31_1277 PF00860 Permease family BF31_1278 PF02254 TrkA-N domain BF31_1278 PF07885 Ion channel BF31_1280 PF04241 Protein of unknown function (DUF423) BF31_1281 PF09671 Spore coat protein (Spore_GerQ) BF31_1282 PF07486 Cell Wall Hydrolase BF31_1283 PF07943 Penicillin-binding protein 5, C-terminal domain BF31_1283 PF00768 D-alanyl-D-alanine carboxypeptidase BF31_1285 PF01515 Phosphate acetyl/butaryl transferase BF31_1286 PF03099 Biotin/lipoate A/B protein ligase family BF31_1289 PF07293 Protein of unknown function (DUF1450) BF31_1290 PF01032 FecCD transport family BF31_1291 PF01032 FecCD transport family BF31_1292 PF01032 FecCD transport family BF31_1293 PF00005 ABC transporter BF31_1294 PF01497 Periplasmic binding protein BF31_1295 PF01966 HD domain BF31_1296 PF01361 Tautomerase enzyme BF31_1297 PF02163 Peptidase family M50 BF31_1298 PF08741 YwhD family BF31_1299 PF00912 Transglycosylase BF31_1299 PF00905 Penicillin binding protein transpeptidase domain BF31_130 PF00672 HAMP domain BF31_130 PF01966 HD domain BF31_1300 PF03009 Glycerophosphoryl diester phosphodiesterase family BF31_1301 PF13411 MerR HTH family regulatory protein BF31_1302 PF07690 Major Facilitator Superfamily BF31_1303 PF17284 Spermidine synthase tetramerisation domain BF31_1304 PF00491 Arginase family BF31_1307 PF02016 LD-carboxypeptidase N-terminal domain BF31_1307 PF17676 LD-carboxypeptidase C-terminal domain BF31_1308 PF09148 Domain of unknown function (DUF1934) BF31_1309 PF00750 tRNA synthetases class I (R) BF31_1309 PF05746 DALR anticodon binding domain BF31_1309 PF03485 Arginyl tRNA synthetase N terminal domain BF31_1310 PF08281 Sigma-70, region 4 BF31_1310 PF04542 Sigma-70 region 2 BF31_1314 PF02225 PA domain BF31_1314 PF04389 Peptidase family M28 BF31_1315 PF01473 Putative cell wall binding repeat BF31_1315 PF02324 Glycosyl hydrolase family 70 BF31_1318 PF00557 Metallopeptidase family M24 BF31_1319 PF00005 ABC transporter BF31_1321 PF07730 Histidine kinase BF31_1321 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_1322 PF00196 Bacterial regulatory proteins, luxR family BF31_1322 PF00072 Response regulator receiver domain BF31_1326 PF00563 EAL domain BF31_1326 PF00990 Diguanylate cyclase, GGDEF domain BF31_1326 PF03707 Bacterial signalling protein N terminal repeat BF31_1327 PF03851 UV-endonuclease UvdE BF31_1328 PF13091 PLD-like domain BF31_1329 PF13183 4Fe-4S dicluster domain BF31_1329 PF02754 Cysteine-rich domain BF31_1330 PF00108 Thiolase, N-terminal domain BF31_1330 PF02803 Thiolase, C-terminal domain BF31_1331 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BF31_1331 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BF31_1332 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BF31_1332 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BF31_1332 PF02770 Acyl-CoA dehydrogenase, middle domain BF31_1333 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BF31_1333 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BF31_1333 PF02770 Acyl-CoA dehydrogenase, middle domain BF31_1335 PF05066 HB1, ASXL, restriction endonuclease HTH domain BF31_1336 PF06418 CTP synthase N-terminus BF31_1336 PF00117 Glutamine amidotransferase class-I BF31_1337 PF10740 Domain of unknown function (DUF2529) BF31_1338 PF00072 Response regulator receiver domain BF31_1339 PF01116 Fructose-bisphosphate aldolase class-II BF31_1340 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BF31_1341 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BF31_1342 PF07498 Rho termination factor, N-terminal domain BF31_1342 PF07497 Rho termination factor, RNA-binding domain BF31_1342 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BF31_1343 PF01197 Ribosomal protein L31 BF31_1344 PF00265 Thymidine kinase BF31_1345 PF03462 PCRF domain BF31_1345 PF00472 RF-1 domain BF31_1346 PF17827 PrmC N-terminal domain BF31_1346 PF13847 Methyltransferase domain BF31_1347 PF09551 Stage II sporulation protein R (spore_II_R) BF31_1349 PF03481 Putative GTP-binding controlling metal-binding BF31_1349 PF01300 Telomere recombination BF31_1350 PF02659 Putative manganese efflux pump BF31_1352 PF01613 Flavin reductase like domain BF31_1353 PF07681 DoxX BF31_1354 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BF31_1355 PF01451 Low molecular weight phosphotyrosine protein phosphatase BF31_1356 PF02502 Ribose/Galactose Isomerase BF31_1357 PF04260 Protein of unknown function (DUF436) BF31_1358 PF00464 Serine hydroxymethyltransferase BF31_136 PF02082 Transcriptional regulator BF31_1361 PF03899 ATP synthase I chain BF31_1362 PF00119 ATP synthase A chain BF31_1363 PF00137 ATP synthase subunit C BF31_1364 PF00430 ATP synthase B/B' CF(0) BF31_1365 PF00213 ATP synthase delta (OSCP) subunit BF31_1366 PF02874 ATP synthase alpha/beta family, beta-barrel domain BF31_1366 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BF31_1366 PF00306 ATP synthase alpha/beta chain, C terminal domain BF31_1367 PF00231 ATP synthase BF31_1368 PF02874 ATP synthase alpha/beta family, beta-barrel domain BF31_1368 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BF31_1369 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BF31_1369 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BF31_137 PF02525 Flavodoxin-like fold BF31_1372 PF00990 Diguanylate cyclase, GGDEF domain BF31_1372 PF03707 Bacterial signalling protein N terminal repeat BF31_1372 PF00563 EAL domain BF31_1373 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BF31_1374 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BF31_1375 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BF31_1376 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BF31_1377 PF00146 NADH dehydrogenase BF31_1379 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BF31_138 PF02733 Dak1 domain BF31_1380 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BF31_1381 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BF31_1381 PF00361 Proton-conducting membrane transporter BF31_1381 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus BF31_1382 PF00361 Proton-conducting membrane transporter BF31_1383 PF00361 Proton-conducting membrane transporter BF31_1384 PF06612 Protein of unknown function (DUF1146) BF31_1386 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BF31_1387 PF08486 Stage II sporulation protein BF31_1388 PF00005 ABC transporter BF31_1389 PF04397 LytTr DNA-binding domain BF31_1389 PF00072 Response regulator receiver domain BF31_1390 PF00005 ABC transporter BF31_1392 PF01551 Peptidase family M23 BF31_1394 PF12116 Stage III sporulation protein D BF31_140 PF02733 Dak1 domain BF31_1402 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BF31_1402 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BF31_1402 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BF31_1403 PF01061 ABC-2 type transporter BF31_1404 PF00005 ABC transporter BF31_1404 PF08239 Bacterial SH3 domain BF31_1405 PF02350 UDP-N-acetylglucosamine 2-epimerase BF31_1406 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BF31_1406 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BF31_1406 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BF31_1407 PF00953 Glycosyl transferase family 4 BF31_1409 PF03610 PTS system fructose IIA component BF31_1409 PF00158 Sigma-54 interaction domain BF31_1409 PF00874 PRD domain BF31_1411 PF02417 Chromate transporter BF31_1412 PF04794 YdjC-like protein BF31_1413 PF02056 Family 4 glycosyl hydrolase BF31_1413 PF11975 Family 4 glycosyl hydrolase C-terminal domain BF31_1414 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BF31_1415 PF02378 Phosphotransferase system, EIIC BF31_1416 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BF31_1418 PF02675 S-adenosylmethionine decarboxylase BF31_1419 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BF31_1420 PF02378 Phosphotransferase system, EIIC BF31_1421 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BF31_1422 PF00375 Sodium:dicarboxylate symporter family BF31_1424 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF31_1426 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF31_1426 PF03466 LysR substrate binding domain BF31_1430 PF01654 Cytochrome bd terminal oxidase subunit I BF31_1431 PF02322 Cytochrome bd terminal oxidase subunit II BF31_1432 PF02040 Arsenical pump membrane protein BF31_1433 PF13667 ThiC-associated domain BF31_1433 PF01964 Radical SAM ThiC family BF31_1434 PF02652 L-lactate permease BF31_1436 PF09988 Uncharacterized metal-binding protein (DUF2227) BF31_1438 PF00884 Sulfatase BF31_1439 PF01063 Amino-transferase class IV BF31_144 PF01066 CDP-alcohol phosphatidyltransferase BF31_1441 PF01476 LysM domain BF31_1441 PF00877 NlpC/P60 family BF31_1442 PF01773 Na+ dependent nucleoside transporter N-terminus BF31_1442 PF07662 Na+ dependent nucleoside transporter C-terminus BF31_1446 PF02028 BCCT, betaine/carnitine/choline family transporter BF31_1447 PF01476 LysM domain BF31_1447 PF06725 3D domain BF31_1452 PF04434 SWIM zinc finger BF31_1453 PF00176 SNF2 family N-terminal domain BF31_1453 PF00271 Helicase conserved C-terminal domain BF31_1453 PF12419 SNF2 Helicase protein BF31_1459 PF04545 Sigma-70, region 4 BF31_1459 PF04542 Sigma-70 region 2 BF31_1460 PF04893 Yip1 domain BF31_1461 PF02687 FtsX-like permease family BF31_1461 PF12704 MacB-like periplasmic core domain BF31_1462 PF00005 ABC transporter BF31_1466 PF07690 Major Facilitator Superfamily BF31_1469 PF00989 PAS fold BF31_1469 PF16736 Single Cache-like BF31_1469 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_1469 PF00512 His Kinase A (phospho-acceptor) domain BF31_1470 PF00072 Response regulator receiver domain BF31_1470 PF00486 Transcriptional regulatory protein, C terminal BF31_1471 PF16363 GDP-mannose 4,6 dehydratase BF31_1472 PF03816 Cell envelope-related transcriptional attenuator domain BF31_1473 PF07977 FabA-like domain BF31_1474 PF02350 UDP-N-acetylglucosamine 2-epimerase BF31_1475 PF03816 Cell envelope-related transcriptional attenuator domain BF31_1476 PF01205 Uncharacterized protein family UPF0029 BF31_1476 PF09186 Domain of unknown function (DUF1949) BF31_1477 PF02645 Uncharacterised protein, DegV family COG1307 BF31_1478 PF01638 HxlR-like helix-turn-helix BF31_1479 PF00877 NlpC/P60 family BF31_1479 PF01476 LysM domain BF31_148 PF18665 Tetracyclin repressor-like, C-terminal domain BF31_148 PF00440 Bacterial regulatory proteins, tetR family BF31_1480 PF04851 Type III restriction enzyme, res subunit BF31_1480 PF00271 Helicase conserved C-terminal domain BF31_1482 PF00313 'Cold-shock' DNA-binding domain BF31_1483 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus BF31_1483 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BF31_1484 PF02810 SEC-C motif BF31_1484 PF01043 SecA preprotein cross-linking domain BF31_1484 PF07517 SecA DEAD-like domain BF31_1484 PF07516 SecA Wing and Scaffold domain BF31_1485 PF00472 RF-1 domain BF31_1485 PF03462 PCRF domain BF31_1486 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BF31_1487 PF00005 ABC transporter BF31_1488 PF18075 FtsX extracellular domain BF31_1488 PF02687 FtsX-like permease family BF31_1489 PF01471 Putative peptidoglycan binding domain BF31_1489 PF03572 Peptidase family S41 BF31_1489 PF17820 PDZ domain BF31_149 PF07993 Male sterility protein BF31_149 PF00550 Phosphopantetheine attachment site BF31_1490 PF17820 PDZ domain BF31_1491 PF00664 ABC transporter transmembrane region BF31_1491 PF00005 ABC transporter BF31_1492 PF01906 Putative heavy-metal-binding BF31_1494 PF03358 NADPH-dependent FMN reductase BF31_1495 PF00376 MerR family regulatory protein BF31_1495 PF09278 MerR, DNA binding BF31_1496 PF03466 LysR substrate binding domain BF31_1496 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF31_1497 PF03601 Conserved hypothetical protein 698 BF31_1501 PF07739 TipAS antibiotic-recognition domain BF31_1501 PF13411 MerR HTH family regulatory protein BF31_1504 PF07282 Putative transposase DNA-binding domain BF31_1504 PF12323 Helix-turn-helix domain BF31_1504 PF01385 Probable transposase BF31_1505 PF02151 UvrB/uvrC motif BF31_1505 PF04851 Type III restriction enzyme, res subunit BF31_1505 PF00271 Helicase conserved C-terminal domain BF31_1505 PF12344 Ultra-violet resistance protein B BF31_1505 PF17757 UvrB interaction domain BF31_1506 PF17760 UvrA interaction domain BF31_1506 PF00005 ABC transporter BF31_1506 PF17755 UvrA DNA-binding domain BF31_1508 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV BF31_1509 PF02603 HPr Serine kinase N terminus BF31_1509 PF07475 HPr Serine kinase C-terminal domain BF31_1510 PF01790 Prolipoprotein diacylglyceryl transferase BF31_1511 PF13419 Haloacid dehalogenase-like hydrolase BF31_1512 PF14602 Hexapeptide repeat of succinyl-transferase BF31_1514 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF31_1516 PF00293 NUDIX domain BF31_1517 PF03668 P-loop ATPase protein family BF31_1518 PF01933 Uncharacterised protein family UPF0052 BF31_1519 PF02650 WhiA C-terminal HTH domain BF31_1519 PF10298 WhiA N-terminal LAGLIDADG-like domain BF31_1519 PF14527 WhiA LAGLIDADG-like domain BF31_1520 PF00381 PTS HPr component phosphorylation site BF31_1521 PF00574 Clp protease BF31_1522 PF04239 Protein of unknown function (DUF421) BF31_1524 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BF31_1525 PF07451 Stage V sporulation protein AD (SpoVAD) BF31_1526 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BF31_1530 PF00309 Sigma-54 factor, Activator interacting domain (AID) BF31_1530 PF04963 Sigma-54 factor, core binding domain BF31_1530 PF04552 Sigma-54, DNA binding domain BF31_1532 PF04198 Putative sugar-binding domain BF31_1533 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BF31_1533 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BF31_1534 PF00162 Phosphoglycerate kinase BF31_1535 PF00121 Triosephosphate isomerase BF31_1536 PF01676 Metalloenzyme superfamily BF31_1536 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BF31_1537 PF03952 Enolase, N-terminal domain BF31_1537 PF00113 Enolase, C-terminal TIM barrel domain BF31_1538 PF02899 Phage integrase, N-terminal SAM-like domain BF31_1538 PF00589 Phage integrase family BF31_1543 PF04860 Phage portal protein BF31_1560 PF01156 Inosine-uridine preferring nucleoside hydrolase BF31_1561 PF03788 LrgA family BF31_1562 PF04172 LrgB-like family BF31_1563 PF03840 Preprotein translocase SecG subunit BF31_1564 PF12146 Serine aminopeptidase, S33 BF31_1565 PF17876 Cold shock domain BF31_1565 PF00575 S1 RNA binding domain BF31_1565 PF00773 RNB domain BF31_1565 PF08206 Ribonuclease B OB domain BF31_1566 PF01668 SmpB protein BF31_1567 PF00072 Response regulator receiver domain BF31_1567 PF00486 Transcriptional regulatory protein, C terminal BF31_1569 PF01032 FecCD transport family BF31_1570 PF01032 FecCD transport family BF31_1571 PF00005 ABC transporter BF31_1574 PF06146 Phosphate-starvation-inducible E BF31_1575 PF13302 Acetyltransferase (GNAT) domain BF31_1578 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BF31_1579 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BF31_1581 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF31_1581 PF00672 HAMP domain BF31_1581 PF17202 Single cache domain 3 BF31_1583 PF01565 FAD binding domain BF31_1583 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BF31_1584 PF01479 S4 domain BF31_1584 PF00579 tRNA synthetases class I (W and Y) BF31_1585 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF31_1586 PF07849 Protein of unknown function (DUF1641) BF31_1587 PF01638 HxlR-like helix-turn-helix BF31_1588 PF07690 Major Facilitator Superfamily BF31_1589 PF00248 Aldo/keto reductase family BF31_159 PF07690 Major Facilitator Superfamily BF31_1594 PF13460 NAD(P)H-binding BF31_1595 PF01235 Sodium:alanine symporter family BF31_1596 PF01235 Sodium:alanine symporter family BF31_1597 PF07662 Na+ dependent nucleoside transporter C-terminus BF31_1597 PF01773 Na+ dependent nucleoside transporter N-terminus BF31_1598 PF07662 Na+ dependent nucleoside transporter C-terminus BF31_1598 PF01773 Na+ dependent nucleoside transporter N-terminus BF31_16 PF05593 RHS Repeat BF31_1600 PF04235 Protein of unknown function (DUF418) BF31_1601 PF00210 Ferritin-like domain BF31_1603 PF03641 Possible lysine decarboxylase BF31_1606 PF00210 Ferritin-like domain BF31_1607 PF01235 Sodium:alanine symporter family BF31_1608 PF02080 TrkA-C domain BF31_1609 PF00999 Sodium/hydrogen exchanger family BF31_1611 PF01047 MarR family BF31_1612 PF17954 Quercetinase C-terminal cupin domain BF31_1612 PF02678 Pirin BF31_1613 PF02868 Thermolysin metallopeptidase, alpha-helical domain BF31_1613 PF07504 Fungalysin/Thermolysin Propeptide Motif BF31_1613 PF03413 Peptidase propeptide and YPEB domain BF31_1613 PF01447 Thermolysin metallopeptidase, catalytic domain BF31_1614 PF01883 Iron-sulfur cluster assembly protein BF31_1615 PF02743 Cache domain BF31_1615 PF00672 HAMP domain BF31_1615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF31_1617 PF09334 tRNA synthetases class I (M) BF31_1617 PF08264 Anticodon-binding domain of tRNA BF31_1619 PF00989 PAS fold BF31_1619 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_1619 PF16736 Single Cache-like BF31_1619 PF00512 His Kinase A (phospho-acceptor) domain BF31_162 PF01925 Sulfite exporter TauE/SafE BF31_1620 PF00486 Transcriptional regulatory protein, C terminal BF31_1620 PF00072 Response regulator receiver domain BF31_1621 PF17969 L,D-transpeptidase C-terminal domain BF31_1621 PF03734 L,D-transpeptidase catalytic domain BF31_1623 PF09335 SNARE associated Golgi protein BF31_1630 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF31_1630 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF31_1632 PF02096 60Kd inner membrane protein BF31_1634 PF13520 Amino acid permease BF31_1635 PF07690 Major Facilitator Superfamily BF31_1639 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF31_1639 PF00672 HAMP domain BF31_1639 PF02743 Cache domain BF31_1640 PF01910 Thiamine-binding protein BF31_1641 PF10835 Protein of unknown function (DUF2573) BF31_1642 PF01619 Proline dehydrogenase BF31_1643 PF00768 D-alanyl-D-alanine carboxypeptidase BF31_1643 PF07943 Penicillin-binding protein 5, C-terminal domain BF31_1644 PF14115 YuzL-like protein BF31_1645 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BF31_1645 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BF31_1645 PF00378 Enoyl-CoA hydratase/isomerase BF31_1646 PF02803 Thiolase, C-terminal domain BF31_1646 PF00108 Thiolase, N-terminal domain BF31_1647 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BF31_1647 PF02770 Acyl-CoA dehydrogenase, middle domain BF31_1647 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BF31_1648 PF00753 Metallo-beta-lactamase superfamily BF31_1649 PF00440 Bacterial regulatory proteins, tetR family BF31_1649 PF13305 Tetracyclin repressor-like, C-terminal domain BF31_1654 PF00056 lactate/malate dehydrogenase, NAD binding domain BF31_1654 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BF31_1663 PF03960 ArsC family BF31_1664 PF01597 Glycine cleavage H-protein BF31_1665 PF01751 Toprim domain BF31_1666 PF00085 Thioredoxin BF31_1668 PF09383 NIL domain BF31_1668 PF00005 ABC transporter BF31_1669 PF00528 Binding-protein-dependent transport system inner membrane component BF31_167 PF03796 DnaB-like helicase C terminal domain BF31_167 PF00772 DnaB-like helicase N terminal domain BF31_1670 PF03180 NLPA lipoprotein BF31_1671 PF03180 NLPA lipoprotein BF31_1672 PF00005 ABC transporter BF31_1673 PF01458 Uncharacterized protein family (UPF0051) BF31_1674 PF00266 Aminotransferase class-V BF31_1675 PF01592 NifU-like N terminal domain BF31_1676 PF01458 Uncharacterized protein family (UPF0051) BF31_1677 PF04892 VanZ like family BF31_1678 PF03551 Transcriptional regulator PadR-like family BF31_1679 PF02872 5'-nucleotidase, C-terminal domain BF31_1680 PF08827 Domain of unknown function (DUF1805) BF31_1682 PF01551 Peptidase family M23 BF31_1683 PF04055 Radical SAM superfamily BF31_1683 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BF31_1687 PF10086 YhfC intramembrane metalloprotease BF31_1688 PF07739 TipAS antibiotic-recognition domain BF31_1688 PF13411 MerR HTH family regulatory protein BF31_1689 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BF31_1690 PF06265 Protein of unknown function (DUF1027) BF31_1693 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BF31_1694 PF01934 Protein of unknown function DUF86 BF31_1696 PF13344 Haloacid dehalogenase-like hydrolase BF31_1697 PF02525 Flavodoxin-like fold BF31_1699 PF04608 Phosphatidylglycerophosphatase A BF31_170 PF06445 GyrI-like small molecule binding domain BF31_170 PF13411 MerR HTH family regulatory protein BF31_1702 PF01106 NifU-like domain BF31_1703 PF07315 Protein of unknown function (DUF1462) BF31_1711 PF03831 PhnA domain BF31_1711 PF08274 PhnA Zinc-Ribbon BF31_1712 PF03649 Uncharacterised protein family (UPF0014) BF31_1713 PF00005 ABC transporter BF31_1713 PF09383 NIL domain BF31_1714 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF31_1715 PF07293 Protein of unknown function (DUF1450) BF31_1716 PF01678 Diaminopimelate epimerase BF31_1717 PF01521 Iron-sulphur cluster biosynthesis BF31_1720 PF04463 Protein of unknown function (DUF523) BF31_1723 PF06445 GyrI-like small molecule binding domain BF31_1725 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF31_1726 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF31_1727 PF00293 NUDIX domain BF31_1727 PF13344 Haloacid dehalogenase-like hydrolase BF31_1729 PF06725 3D domain BF31_1730 PF02789 Cytosol aminopeptidase family, N-terminal domain BF31_1730 PF00883 Cytosol aminopeptidase family, catalytic domain BF31_1731 PF02457 DisA bacterial checkpoint controller nucleotide-binding BF31_1731 PF10372 Bacterial membrane-spanning protein N-terminus BF31_1732 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BF31_1732 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BF31_1732 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BF31_1732 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BF31_1733 PF00483 Nucleotidyl transferase BF31_1735 PF02632 BioY family BF31_1737 PF03061 Thioesterase superfamily BF31_1738 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BF31_1738 PF03129 Anticodon binding domain BF31_174 PF02342 TerD domain BF31_1741 PF03600 Citrate transporter BF31_1742 PF00929 Exonuclease BF31_1743 PF08810 Kinase associated protein B BF31_1746 PF00155 Aminotransferase class I and II BF31_1748 PF08386 TAP-like protein BF31_1748 PF00561 alpha/beta hydrolase fold BF31_1749 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BF31_1749 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BF31_175 PF03401 Tripartite tricarboxylate transporter family receptor BF31_1750 PF01037 Lrp/AsnC ligand binding domain BF31_1751 PF00155 Aminotransferase class I and II BF31_1752 PF00575 S1 RNA binding domain BF31_1753 PF04070 Domain of unknown function (DUF378) BF31_1754 PF00342 Phosphoglucose isomerase BF31_1755 PF02254 TrkA-N domain BF31_1755 PF07885 Ion channel BF31_1756 PF08868 YugN-like family BF31_1757 PF02308 MgtC family BF31_176 PF08279 HTH domain BF31_176 PF00072 Response regulator receiver domain BF31_176 PF12431 Transcriptional regulator BF31_1765 PF05697 Bacterial trigger factor protein (TF) BF31_1765 PF05698 Bacterial trigger factor protein (TF) C-terminus BF31_177 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BF31_177 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_178 PF00083 Sugar (and other) transporter BF31_1784 PF00056 lactate/malate dehydrogenase, NAD binding domain BF31_1784 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BF31_1785 PF00128 Alpha amylase, catalytic domain BF31_1785 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BF31_1785 PF02806 Alpha amylase, C-terminal all-beta domain BF31_1786 PF00483 Nucleotidyl transferase BF31_1787 PF00483 Nucleotidyl transferase BF31_1788 PF00534 Glycosyl transferases group 1 BF31_1788 PF08323 Starch synthase catalytic domain BF31_1789 PF00343 Carbohydrate phosphorylase BF31_1793 PF00313 'Cold-shock' DNA-binding domain BF31_1794 PF01258 Prokaryotic dksA/traR C4-type zinc finger BF31_1795 PF01040 UbiA prenyltransferase family BF31_1796 PF00425 chorismate binding enzyme BF31_1797 PF16582 Middle domain of thiamine pyrophosphate BF31_1797 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BF31_1797 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BF31_1798 PF00561 alpha/beta hydrolase fold BF31_1799 PF00378 Enoyl-CoA hydratase/isomerase BF31_1800 PF00501 AMP-binding enzyme BF31_1800 PF13193 AMP-binding enzyme C-terminal domain BF31_1801 PF13378 Enolase C-terminal domain-like BF31_1801 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BF31_1802 PF00072 Response regulator receiver domain BF31_1802 PF00486 Transcriptional regulatory protein, C terminal BF31_1803 PF00512 His Kinase A (phospho-acceptor) domain BF31_1803 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_1804 PF02557 D-alanyl-D-alanine carboxypeptidase BF31_1807 PF01979 Amidohydrolase family BF31_1808 PF03841 L-seryl-tRNA selenium transferase BF31_1809 PF07071 KDGP aldolase BF31_1812 PF02447 GntP family permease BF31_1814 PF02687 FtsX-like permease family BF31_1815 PF02687 FtsX-like permease family BF31_1816 PF00005 ABC transporter BF31_1817 PF02687 FtsX-like permease family BF31_1818 PF02687 FtsX-like permease family BF31_1819 PF02687 FtsX-like permease family BF31_1820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_1821 PF00072 Response regulator receiver domain BF31_1821 PF00486 Transcriptional regulatory protein, C terminal BF31_1822 PF12833 Helix-turn-helix domain BF31_1822 PF06445 GyrI-like small molecule binding domain BF31_1823 PF00005 ABC transporter BF31_1824 PF02687 FtsX-like permease family BF31_1825 PF00398 Ribosomal RNA adenine dimethylase BF31_1826 PF09335 SNARE associated Golgi protein BF31_1829 PF00248 Aldo/keto reductase family BF31_1833 PF00781 Diacylglycerol kinase catalytic domain BF31_1834 PF00156 Phosphoribosyl transferase domain BF31_1839 PF00072 Response regulator receiver domain BF31_1839 PF00486 Transcriptional regulatory protein, C terminal BF31_184 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF31_184 PF00005 ABC transporter BF31_1840 PF00512 His Kinase A (phospho-acceptor) domain BF31_1840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_1840 PF00672 HAMP domain BF31_1841 PF09515 Thiamine transporter protein (Thia_YuaJ) BF31_1843 PF02421 Ferrous iron transport protein B BF31_1843 PF17910 FeoB cytosolic helical domain BF31_1843 PF07664 Ferrous iron transport protein B C terminus BF31_1843 PF07670 Nucleoside recognition BF31_1847 PF04012 PspA/IM30 family BF31_185 PF00005 ABC transporter BF31_185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF31_1852 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF31_1852 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF31_1855 PF10676 Spore germination protein gerPA/gerPF BF31_1856 PF02322 Cytochrome bd terminal oxidase subunit II BF31_1857 PF01654 Cytochrome bd terminal oxidase subunit I BF31_1858 PF01809 Putative membrane protein insertion efficiency factor BF31_1859 PF00484 Carbonic anhydrase BF31_186 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF31_186 PF00005 ABC transporter BF31_1860 PF02664 S-Ribosylhomocysteinase (LuxS) BF31_1864 PF00293 NUDIX domain BF31_187 PF12911 N-terminal TM domain of oligopeptide transport permease C BF31_187 PF00528 Binding-protein-dependent transport system inner membrane component BF31_1870 PF00528 Binding-protein-dependent transport system inner membrane component BF31_1871 PF00005 ABC transporter BF31_1876 PF00884 Sulfatase BF31_1877 PF08386 TAP-like protein BF31_1877 PF00561 alpha/beta hydrolase fold BF31_1878 PF00512 His Kinase A (phospho-acceptor) domain BF31_1878 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_1878 PF00989 PAS fold BF31_1878 PF08447 PAS fold BF31_1879 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_1879 PF00512 His Kinase A (phospho-acceptor) domain BF31_1879 PF00989 PAS fold BF31_1879 PF13188 PAS domain BF31_1879 PF13426 PAS domain BF31_188 PF00528 Binding-protein-dependent transport system inner membrane component BF31_1880 PF01784 NIF3 (NGG1p interacting factor 3) BF31_1886 PF01293 Phosphoenolpyruvate carboxykinase BF31_1887 PF02773 S-adenosylmethionine synthetase, C-terminal domain BF31_1887 PF00438 S-adenosylmethionine synthetase, N-terminal domain BF31_1887 PF02772 S-adenosylmethionine synthetase, central domain BF31_189 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF31_1890 PF00994 Probable molybdopterin binding domain BF31_1891 PF12804 MobA-like NTP transferase domain BF31_1892 PF00534 Glycosyl transferases group 1 BF31_1892 PF13439 Glycosyltransferase Family 4 BF31_1893 PF01569 PAP2 superfamily BF31_1894 PF00132 Bacterial transferase hexapeptide (six repeats) BF31_1895 PF12146 Serine aminopeptidase, S33 BF31_1896 PF10776 Protein of unknown function (DUF2600) BF31_1899 PF01177 Asp/Glu/Hydantoin racemase BF31_19 PF05593 RHS Repeat BF31_1901 PF13732 Domain of unknown function (DUF4162) BF31_1901 PF00005 ABC transporter BF31_1902 PF06962 Putative rRNA methylase BF31_1903 PF16199 Radical_SAM C-terminal domain BF31_1903 PF04055 Radical SAM superfamily BF31_1904 PF10732 Protein of unknown function (DUF2524) BF31_1906 PF04235 Protein of unknown function (DUF418) BF31_1906 PF07786 Protein of unknown function (DUF1624) BF31_1907 PF00005 ABC transporter BF31_1909 PF00589 Phage integrase family BF31_1910 PF02080 TrkA-C domain BF31_1911 PF00999 Sodium/hydrogen exchanger family BF31_1912 PF07690 Major Facilitator Superfamily BF31_1913 PF08264 Anticodon-binding domain of tRNA BF31_1913 PF13603 Leucyl-tRNA synthetase, Domain 2 BF31_1913 PF00133 tRNA synthetases class I (I, L, M and V) BF31_1913 PF09334 tRNA synthetases class I (M) BF31_1918 PF03845 Spore germination protein BF31_1919 PF03323 Bacillus/Clostridium GerA spore germination protein BF31_1920 PF00561 alpha/beta hydrolase fold BF31_1922 PF00581 Rhodanese-like domain BF31_1926 PF04055 Radical SAM superfamily BF31_1926 PF06463 Molybdenum Cofactor Synthesis C BF31_1927 PF00899 ThiF family BF31_1928 PF01967 MoaC family BF31_1929 PF03454 MoeA C-terminal region (domain IV) BF31_1929 PF00994 Probable molybdopterin binding domain BF31_1929 PF03453 MoeA N-terminal region (domain I and II) BF31_193 PF18593 CdiI immunity protein BF31_1930 PF03205 Molybdopterin guanine dinucleotide synthesis protein B BF31_1931 PF02391 MoaE protein BF31_1934 PF06800 Sugar transport protein BF31_1936 PF02559 CarD-like/TRCF domain BF31_1938 PF10957 Sporulation protein Cse60 BF31_194 PF02423 Ornithine cyclodeaminase/mu-crystallin family BF31_1940 PF08327 Activator of Hsp90 ATPase homolog 1-like protein BF31_1941 PF01022 Bacterial regulatory protein, arsR family BF31_1942 PF07690 Major Facilitator Superfamily BF31_1944 PF01943 Polysaccharide biosynthesis protein BF31_1944 PF14667 Polysaccharide biosynthesis C-terminal domain BF31_1945 PF00849 RNA pseudouridylate synthase BF31_1945 PF01479 S4 domain BF31_1946 PF08220 DeoR-like helix-turn-helix domain BF31_1947 PF01546 Peptidase family M20/M25/M40 BF31_1948 PF01546 Peptidase family M20/M25/M40 BF31_1949 PF02834 LigT like Phosphoesterase BF31_195 PF05544 Proline racemase BF31_1950 PF00128 Alpha amylase, catalytic domain BF31_1950 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BF31_1950 PF17999 Pullulanase N1-terminal domain BF31_1951 PF01636 Phosphotransferase enzyme family BF31_1952 PF14165 YtzH-like protein BF31_1953 PF02390 Putative methyltransferase BF31_1954 PF00753 Metallo-beta-lactamase superfamily BF31_1956 PF05343 M42 glutamyl aminopeptidase BF31_1957 PF01931 Protein of unknown function DUF84 BF31_1958 PF00085 Thioredoxin BF31_1959 PF07285 Protein of unknown function (DUF1444) BF31_196 PF11121 Protein of unknown function (DUF2639) BF31_1960 PF01588 Putative tRNA binding domain BF31_1960 PF14794 Domain of unknown function (DUF4479) BF31_1962 PF17854 FtsK alpha domain BF31_1962 PF09397 Ftsk gamma domain BF31_1962 PF01580 FtsK/SpoIIIE family BF31_1964 PF01225 Mur ligase family, catalytic domain BF31_1964 PF02875 Mur ligase family, glutamate ligase domain BF31_1964 PF08245 Mur ligase middle domain BF31_1965 PF13302 Acetyltransferase (GNAT) domain BF31_1969 PF02073 Thermophilic metalloprotease (M29) BF31_1971 PF11009 Protein of unknown function (DUF2847) BF31_1972 PF07537 CamS sex pheromone cAM373 precursor BF31_1973 PF00356 Bacterial regulatory proteins, lacI family BF31_1978 PF01741 Large-conductance mechanosensitive channel, MscL BF31_1979 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BF31_198 PF00395 S-layer homology domain BF31_198 PF01520 N-acetylmuramoyl-L-alanine amidase BF31_1980 PF12796 Ankyrin repeats (3 copies) BF31_1981 PF13426 PAS domain BF31_1981 PF00512 His Kinase A (phospho-acceptor) domain BF31_1981 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_1981 PF00672 HAMP domain BF31_1982 PF00486 Transcriptional regulatory protein, C terminal BF31_1982 PF00072 Response regulator receiver domain BF31_1984 PF00850 Histone deacetylase domain BF31_1985 PF00571 CBS domain BF31_1986 PF00583 Acetyltransferase (GNAT) family BF31_1987 PF00501 AMP-binding enzyme BF31_1987 PF13193 AMP-binding enzyme C-terminal domain BF31_1989 PF08281 Sigma-70, region 4 BF31_1989 PF04542 Sigma-70 region 2 BF31_199 PF05343 M42 glutamyl aminopeptidase BF31_1991 PF01479 S4 domain BF31_1991 PF00579 tRNA synthetases class I (W and Y) BF31_1994 PF00163 Ribosomal protein S4/S9 N-terminal domain BF31_1994 PF01479 S4 domain BF31_1995 PF01053 Cys/Met metabolism PLP-dependent enzyme BF31_1996 PF13185 GAF domain BF31_1997 PF00440 Bacterial regulatory proteins, tetR family BF31_1998 PF00440 Bacterial regulatory proteins, tetR family BF31_1999 PF00892 EamA-like transporter family BF31_2 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_2 PF00512 His Kinase A (phospho-acceptor) domain BF31_20 PF01520 N-acetylmuramoyl-L-alanine amidase BF31_20 PF00395 S-layer homology domain BF31_2000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF31_2000 PF03466 LysR substrate binding domain BF31_2001 PF06160 Septation ring formation regulator, EzrA BF31_2002 PF00266 Aminotransferase class-V BF31_2003 PF02568 Thiamine biosynthesis protein (ThiI) BF31_2003 PF02926 THUMP domain BF31_2004 PF00269 Small, acid-soluble spore proteins, alpha/beta type BF31_2005 PF13193 AMP-binding enzyme C-terminal domain BF31_2005 PF00501 AMP-binding enzyme BF31_2007 PF07969 Amidohydrolase family BF31_2008 PF01513 ATP-NAD kinase BF31_2010 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BF31_2011 PF08534 Redoxin BF31_2012 PF02384 N-6 DNA Methylase BF31_2013 PF00871 Acetokinase family BF31_2016 PF12787 EcsC protein family BF31_2017 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF31_2017 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF31_202 PF00378 Enoyl-CoA hydratase/isomerase BF31_2021 PF00764 Arginosuccinate synthase BF31_2022 PF00206 Lyase BF31_2022 PF14698 Argininosuccinate lyase C-terminal BF31_2026 PF00582 Universal stress protein family BF31_2028 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BF31_2028 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BF31_2030 PF01381 Helix-turn-helix BF31_2032 PF07883 Cupin domain BF31_2033 PF12746 GNAT acetyltransferase BF31_2039 PF11518 Protein of unknown function (DUF3221) BF31_2040 PF00557 Metallopeptidase family M24 BF31_2040 PF01321 Creatinase/Prolidase N-terminal domain BF31_2043 PF03061 Thioesterase superfamily BF31_2043 PF07085 DRTGG domain BF31_2043 PF00571 CBS domain BF31_2043 PF00392 Bacterial regulatory proteins, gntR family BF31_2046 PF14007 YtpI-like protein BF31_2047 PF02272 DHHA1 domain BF31_2047 PF01368 DHH family BF31_2049 PF14034 Sporulation protein YtrH BF31_205 PF03062 MBOAT, membrane-bound O-acyltransferase family BF31_2050 PF01336 OB-fold nucleic acid binding domain BF31_2050 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BF31_2050 PF07733 Bacterial DNA polymerase III alpha NTPase domain BF31_2050 PF14579 Helix-hairpin-helix motif BF31_2050 PF02811 PHP domain BF31_2051 PF00390 Malic enzyme, N-terminal domain BF31_2051 PF03949 Malic enzyme, NAD binding domain BF31_2052 PF00392 Bacterial regulatory proteins, gntR family BF31_2053 PF01039 Carboxyl transferase domain BF31_2053 PF17848 Acetyl-coA carboxylase zinc finger domain BF31_2054 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BF31_2055 PF00365 Phosphofructokinase BF31_2056 PF00391 PEP-utilising enzyme, mobile domain BF31_2056 PF02887 Pyruvate kinase, alpha/beta domain BF31_2056 PF00224 Pyruvate kinase, barrel domain BF31_2057 PF04186 FxsA cytoplasmic membrane protein BF31_2058 PF01594 AI-2E family transporter BF31_2059 PF04284 Protein of unknown function (DUF441) BF31_206 PF03062 MBOAT, membrane-bound O-acyltransferase family BF31_2060 PF00285 Citrate synthase, C-terminal domain BF31_2061 PF00180 Isocitrate/isopropylmalate dehydrogenase BF31_2062 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BF31_2062 PF00056 lactate/malate dehydrogenase, NAD binding domain BF31_2065 PF00072 Response regulator receiver domain BF31_2065 PF00486 Transcriptional regulatory protein, C terminal BF31_2066 PF00512 His Kinase A (phospho-acceptor) domain BF31_2066 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_2066 PF16736 Single Cache-like BF31_2066 PF00989 PAS fold BF31_2067 PF00476 DNA polymerase family A BF31_2067 PF01367 5'-3' exonuclease, C-terminal SAM fold BF31_2067 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BF31_2068 PF06827 Zinc finger found in FPG and IleRS BF31_2068 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BF31_2068 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BF31_2069 PF02659 Putative manganese efflux pump BF31_2070 PF01121 Dephospho-CoA kinase BF31_2071 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BF31_2071 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BF31_2072 PF02675 S-adenosylmethionine decarboxylase BF31_2073 PF03477 ATP cone domain BF31_2074 PF07261 Replication initiation and membrane attachment BF31_2075 PF07319 Primosomal protein DnaI N-terminus BF31_2075 PF01695 IstB-like ATP binding protein BF31_2076 PF08812 YtxC-like family BF31_2077 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BF31_2077 PF02824 TGS domain BF31_2077 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BF31_2077 PF03129 Anticodon binding domain BF31_2078 PF00707 Translation initiation factor IF-3, C-terminal domain BF31_2078 PF05198 Translation initiation factor IF-3, N-terminal domain BF31_2079 PF01632 Ribosomal protein L35 BF31_208 PF00395 S-layer homology domain BF31_2080 PF00453 Ribosomal protein L20 BF31_2082 PF05343 M42 glutamyl aminopeptidase BF31_2083 PF16859 Tetracyclin repressor-like, C-terminal domain BF31_2083 PF00440 Bacterial regulatory proteins, tetR family BF31_2085 PF07690 Major Facilitator Superfamily BF31_209 PF02368 Bacterial Ig-like domain (group 2) BF31_209 PF00395 S-layer homology domain BF31_209 PF13205 Bacterial Ig-like domain BF31_2090 PF01966 HD domain BF31_2091 PF14098 Small, acid-soluble spore protein I BF31_2092 PF00588 SpoU rRNA Methylase family BF31_2092 PF08032 RNA 2'-O ribose methyltransferase substrate binding BF31_2093 PF01409 tRNA synthetases class II core domain (F) BF31_2093 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BF31_2094 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BF31_2094 PF01588 Putative tRNA binding domain BF31_2094 PF03147 Ferredoxin-fold anticodon binding domain BF31_2094 PF03484 tRNA synthetase B5 domain BF31_2094 PF03483 B3/4 domain BF31_2095 PF01336 OB-fold nucleic acid binding domain BF31_2095 PF00152 tRNA synthetases class II (D, K and N) BF31_2099 PF01351 Ribonuclease HII BF31_2099 PF11858 Domain of unknown function (DUF3378) BF31_2100 PF05164 Cell division protein ZapA BF31_2101 PF02674 Colicin V production protein BF31_2102 PF14791 DNA polymerase beta thumb BF31_2102 PF14716 Helix-hairpin-helix domain BF31_2102 PF02811 PHP domain BF31_2103 PF01713 Smr domain BF31_2103 PF00488 MutS domain V BF31_2105 PF01479 S4 domain BF31_2105 PF00849 RNA pseudouridylate synthase BF31_2106 PF05525 Branched-chain amino acid transport protein BF31_2107 PF05031 Iron Transport-associated domain BF31_2109 PF05031 Iron Transport-associated domain BF31_211 PF01943 Polysaccharide biosynthesis protein BF31_211 PF14667 Polysaccharide biosynthesis C-terminal domain BF31_2110 PF01497 Periplasmic binding protein BF31_2111 PF01032 FecCD transport family BF31_2112 PF00005 ABC transporter BF31_2113 PF04203 Sortase domain BF31_2114 PF03992 Antibiotic biosynthesis monooxygenase BF31_2116 PF10672 S-adenosylmethionine-dependent methyltransferase BF31_2116 PF17785 PUA-like domain BF31_2117 PF09962 Uncharacterized conserved protein (DUF2196) BF31_2119 PF00486 Transcriptional regulatory protein, C terminal BF31_2119 PF00072 Response regulator receiver domain BF31_212 PF01043 SecA preprotein cross-linking domain BF31_212 PF07517 SecA DEAD-like domain BF31_212 PF07516 SecA Wing and Scaffold domain BF31_2120 PF00512 His Kinase A (phospho-acceptor) domain BF31_2120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_2121 PF00005 ABC transporter BF31_2127 PF05163 DinB family BF31_2128 PF01032 FecCD transport family BF31_2129 PF01497 Periplasmic binding protein BF31_2131 PF13193 AMP-binding enzyme C-terminal domain BF31_2131 PF00501 AMP-binding enzyme BF31_2132 PF00440 Bacterial regulatory proteins, tetR family BF31_2132 PF08359 YsiA-like protein, C-terminal region BF31_2133 PF00378 Enoyl-CoA hydratase/isomerase BF31_2134 PF01012 Electron transfer flavoprotein domain BF31_2135 PF01012 Electron transfer flavoprotein domain BF31_2135 PF00766 Electron transfer flavoprotein FAD-binding domain BF31_2136 PF00085 Thioredoxin BF31_2137 PF08459 UvrC Helix-hairpin-helix N-terminal BF31_2137 PF02151 UvrB/uvrC motif BF31_2137 PF01541 GIY-YIG catalytic domain BF31_2138 PF10702 Protein of unknown function (DUF2507) BF31_2139 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BF31_2140 PF02910 Fumarate reductase flavoprotein C-term BF31_2140 PF00890 FAD binding domain BF31_2141 PF13085 2Fe-2S iron-sulfur cluster binding domain BF31_2141 PF13183 4Fe-4S dicluster domain BF31_2142 PF03061 Thioesterase superfamily BF31_2143 PF02557 D-alanyl-D-alanine carboxypeptidase BF31_2144 PF01618 MotA/TolQ/ExbB proton channel family BF31_2145 PF13677 Membrane MotB of proton-channel complex MotA/MotB BF31_2145 PF00691 OmpA family BF31_2146 PF13677 Membrane MotB of proton-channel complex MotA/MotB BF31_2146 PF00691 OmpA family BF31_2147 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) BF31_2148 PF13732 Domain of unknown function (DUF4162) BF31_2148 PF00005 ABC transporter BF31_2150 PF02082 Transcriptional regulator BF31_2151 PF00230 Major intrinsic protein BF31_2152 PF13536 Putative multidrug resistance efflux transporter BF31_2153 PF01381 Helix-turn-helix BF31_2153 PF07883 Cupin domain BF31_2154 PF04024 PspC domain BF31_2157 PF00072 Response regulator receiver domain BF31_2157 PF04397 LytTr DNA-binding domain BF31_2158 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_2158 PF06580 Histidine kinase BF31_2158 PF07694 5TMR of 5TMR-LYT BF31_2159 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF31_2159 PF00005 ABC transporter BF31_216 PF01740 STAS domain BF31_216 PF00916 Sulfate permease family BF31_2160 PF00005 ABC transporter BF31_2160 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF31_2161 PF00528 Binding-protein-dependent transport system inner membrane component BF31_2163 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF31_2164 PF07969 Amidohydrolase family BF31_2165 PF07969 Amidohydrolase family BF31_2167 PF00860 Permease family BF31_2168 PF00196 Bacterial regulatory proteins, luxR family BF31_2171 PF00440 Bacterial regulatory proteins, tetR family BF31_2173 PF07690 Major Facilitator Superfamily BF31_2174 PF01177 Asp/Glu/Hydantoin racemase BF31_2175 PF10646 Sporulation and spore germination BF31_2176 PF03725 3' exoribonuclease family, domain 2 BF31_2176 PF01138 3' exoribonuclease family, domain 1 BF31_2177 PF01725 Ham1 family BF31_2178 PF12850 Calcineurin-like phosphoesterase superfamily domain BF31_218 PF13193 AMP-binding enzyme C-terminal domain BF31_218 PF00501 AMP-binding enzyme BF31_2182 PF11724 YvbH-like oligomerisation region BF31_2182 PF08000 Bacterial PH domain BF31_2186 PF05697 Bacterial trigger factor protein (TF) BF31_2186 PF05698 Bacterial trigger factor protein (TF) C-terminus BF31_2186 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BF31_2187 PF06689 ClpX C4-type zinc finger BF31_2187 PF10431 C-terminal, D2-small domain, of ClpB protein BF31_2187 PF07724 AAA domain (Cdc48 subfamily) BF31_2188 PF00004 ATPase family associated with various cellular activities (AAA) BF31_2188 PF05362 Lon protease (S16) C-terminal proteolytic domain BF31_2189 PF05362 Lon protease (S16) C-terminal proteolytic domain BF31_2189 PF02190 ATP-dependent protease La (LON) substrate-binding domain BF31_2189 PF00004 ATPase family associated with various cellular activities (AAA) BF31_219 PF04055 Radical SAM superfamily BF31_2190 PF01926 50S ribosome-binding GTPase BF31_2191 PF02566 OsmC-like protein BF31_2192 PF01047 MarR family BF31_2193 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BF31_2193 PF01488 Shikimate / quinate 5-dehydrogenase BF31_2193 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BF31_2194 PF01578 Cytochrome C assembly protein BF31_2195 PF03900 Porphobilinogen deaminase, C-terminal domain BF31_2195 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BF31_2196 PF02602 Uroporphyrinogen-III synthase HemD BF31_2197 PF00490 Delta-aminolevulinic acid dehydratase BF31_2198 PF00202 Aminotransferase class-III BF31_2199 PF01476 LysM domain BF31_22 PF13193 AMP-binding enzyme C-terminal domain BF31_22 PF00501 AMP-binding enzyme BF31_2201 PF10458 Valyl tRNA synthetase tRNA binding arm BF31_2201 PF00133 tRNA synthetases class I (I, L, M and V) BF31_2201 PF08264 Anticodon-binding domain of tRNA BF31_2202 PF02875 Mur ligase family, glutamate ligase domain BF31_2202 PF08245 Mur ligase middle domain BF31_2204 PF02545 Maf-like protein BF31_2205 PF04002 RadC-like JAB domain BF31_2207 PF04085 rod shape-determining protein MreC BF31_2209 PF03775 Septum formation inhibitor MinC, C-terminal domain BF31_221 PF01471 Putative peptidoglycan binding domain BF31_221 PF01510 N-acetylmuramoyl-L-alanine amidase BF31_221 PF01476 LysM domain BF31_2210 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BF31_2211 PF01551 Peptidase family M23 BF31_2212 PF02163 Peptidase family M50 BF31_2213 PF10150 Ribonuclease E/G family BF31_2213 PF00575 S1 RNA binding domain BF31_2214 PF00829 Ribosomal prokaryotic L21 protein BF31_2215 PF04327 Cysteine protease Prp BF31_2216 PF01016 Ribosomal L27 protein BF31_2217 PF14682 Sporulation initiation phospho-transferase B, C-terminal BF31_2217 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BF31_2218 PF01018 GTP1/OBG BF31_2218 PF01926 50S ribosome-binding GTPase BF31_2218 PF09269 Domain of unknown function (DUF1967) BF31_2219 PF00486 Transcriptional regulatory protein, C terminal BF31_2219 PF00072 Response regulator receiver domain BF31_2221 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_2222 PF00005 ABC transporter BF31_2223 PF02687 FtsX-like permease family BF31_2226 PF00800 Prephenate dehydratase BF31_2226 PF01842 ACT domain BF31_2227 PF03473 MOSC domain BF31_2227 PF03475 3-alpha domain BF31_2228 PF08279 HTH domain BF31_2228 PF02829 3H domain BF31_2229 PF00266 Aminotransferase class-V BF31_2230 PF00890 FAD binding domain BF31_2230 PF02910 Fumarate reductase flavoprotein C-term BF31_2231 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BF31_2231 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BF31_2232 PF02445 Quinolinate synthetase A protein BF31_2233 PF01476 LysM domain BF31_2236 PF01022 Bacterial regulatory protein, arsR family BF31_2237 PF00892 EamA-like transporter family BF31_2238 PF00892 EamA-like transporter family BF31_224 PF02245 Methylpurine-DNA glycosylase (MPG) BF31_2240 PF01497 Periplasmic binding protein BF31_2241 PF01330 RuvA N terminal domain BF31_2241 PF07499 RuvA, C-terminal domain BF31_2242 PF05491 RuvB C-terminal winged helix domain BF31_2242 PF05496 Holliday junction DNA helicase RuvB P-loop domain BF31_2242 PF17864 RuvB AAA lid domain BF31_2243 PF11146 Protein of unknown function (DUF2905) BF31_2244 PF02547 Queuosine biosynthesis protein BF31_2245 PF01702 Queuine tRNA-ribosyltransferase BF31_2246 PF02699 Preprotein translocase subunit BF31_2248 PF04239 Protein of unknown function (DUF421) BF31_2249 PF14667 Polysaccharide biosynthesis C-terminal domain BF31_2249 PF01943 Polysaccharide biosynthesis protein BF31_2250 PF13797 Post-transcriptional regulator BF31_2251 PF07549 SecD/SecF GG Motif BF31_2251 PF02355 Protein export membrane protein BF31_2252 PF16916 Dimerisation domain of Zinc Transporter BF31_2252 PF01545 Cation efflux family BF31_2253 PF01368 DHH family BF31_2253 PF10141 Single-strand DNA-specific exonuclease, C terminal domain BF31_2253 PF17768 RecJ OB domain BF31_2253 PF02272 DHHA1 domain BF31_2254 PF00156 Phosphoribosyl transferase domain BF31_2255 PF04607 Region found in RelA / SpoT proteins BF31_2255 PF13291 ACT domain BF31_2255 PF02824 TGS domain BF31_2256 PF02580 D-Tyr-tRNA(Tyr) deacylase BF31_2258 PF03129 Anticodon binding domain BF31_2258 PF13393 Histidyl-tRNA synthetase BF31_2259 PF00152 tRNA synthetases class II (D, K and N) BF31_2259 PF01336 OB-fold nucleic acid binding domain BF31_2259 PF02938 GAD domain BF31_226 PF03306 Alpha-acetolactate decarboxylase BF31_2260 PF00899 ThiF family BF31_2261 PF05496 Holliday junction DNA helicase RuvB P-loop domain BF31_2261 PF12002 MgsA AAA+ ATPase C terminal BF31_2261 PF16193 AAA C-terminal domain BF31_2262 PF02082 Transcriptional regulator BF31_2263 PF00266 Aminotransferase class-V BF31_2266 PF14490 Helix-hairpin-helix containing domain BF31_2266 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain BF31_2266 PF13538 UvrD-like helicase C-terminal domain BF31_227 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BF31_227 PF00205 Thiamine pyrophosphate enzyme, central domain BF31_227 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BF31_2270 PF01594 AI-2E family transporter BF31_2272 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BF31_2272 PF02272 DHHA1 domain BF31_2272 PF01411 tRNA synthetases class II (A) BF31_2273 PF06135 IreB regulatory phosphoprotein BF31_2274 PF03652 Holliday junction resolvase BF31_2275 PF06949 Protein of unknown function (DUF1292) BF31_2276 PF02618 YceG-like family BF31_2280 PF00485 Phosphoribulokinase / Uridine kinase family BF31_2281 PF01272 Transcription elongation factor, GreA/GreB, C-term BF31_2281 PF03449 Transcription elongation factor, N-terminal BF31_2282 PF00905 Penicillin binding protein transpeptidase domain BF31_2282 PF03717 Penicillin-binding Protein dimerisation domain BF31_2285 PF08241 Methyltransferase domain BF31_2286 PF01048 Phosphorylase superfamily BF31_2287 PF00291 Pyridoxal-phosphate dependent enzyme BF31_2288 PF01053 Cys/Met metabolism PLP-dependent enzyme BF31_2289 PF00465 Iron-containing alcohol dehydrogenase BF31_2289 PF00171 Aldehyde dehydrogenase family BF31_2290 PF14143 YrhC-like protein BF31_2291 PF01497 Periplasmic binding protein BF31_2292 PF01032 FecCD transport family BF31_2293 PF00005 ABC transporter BF31_2299 PF07681 DoxX BF31_230 PF06133 Control of competence regulator ComK, YlbF/YmcA BF31_2300 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF31_2301 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF31_2303 PF00351 Biopterin-dependent aromatic amino acid hydroxylase BF31_2304 PF00082 Subtilase family BF31_2304 PF05922 Peptidase inhibitor I9 BF31_2304 PF13860 FlgD Ig-like domain BF31_2304 PF02225 PA domain BF31_231 PF04286 Protein of unknown function (DUF445) BF31_2311 PF00561 alpha/beta hydrolase fold BF31_2311 PF08386 TAP-like protein BF31_2313 PF00245 Alkaline phosphatase BF31_2315 PF04607 Region found in RelA / SpoT proteins BF31_2316 PF00881 Nitroreductase family BF31_2317 PF00471 Ribosomal protein L33 BF31_2318 PF16244 Domain of unknown function (DUF4901) BF31_2321 PF04542 Sigma-70 region 2 BF31_2321 PF04545 Sigma-70, region 4 BF31_2322 PF02666 Phosphatidylserine decarboxylase BF31_2325 PF01926 50S ribosome-binding GTPase BF31_2326 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BF31_2326 PF08501 Shikimate dehydrogenase substrate binding domain BF31_2326 PF01488 Shikimate / quinate 5-dehydrogenase BF31_2327 PF01985 CRS1 / YhbY (CRM) domain BF31_2328 PF01467 Cytidylyltransferase-like BF31_2329 PF01966 HD domain BF31_233 PF14398 YheC/D like ATP-grasp BF31_2331 PF13649 Methyltransferase domain BF31_2332 PF14748 Pyrroline-5-carboxylate reductase dimerisation BF31_2332 PF03807 NADP oxidoreductase coenzyme F420-dependent BF31_2333 PF10531 SLBB domain BF31_2334 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BF31_2335 PF03772 Competence protein BF31_2335 PF13567 Domain of unknown function (DUF4131) BF31_2335 PF00753 Metallo-beta-lactamase superfamily BF31_2336 PF14141 YqzM-like protein BF31_2337 PF06144 DNA polymerase III, delta subunit BF31_2338 PF01649 Ribosomal protein S20 BF31_2339 PF03418 Germination protease BF31_2341 PF06421 GTP-binding protein LepA C-terminus BF31_2341 PF00009 Elongation factor Tu GTP binding domain BF31_2341 PF00679 Elongation factor G C-terminus BF31_2341 PF03144 Elongation factor Tu domain 2 BF31_2342 PF01638 HxlR-like helix-turn-helix BF31_2343 PF04055 Radical SAM superfamily BF31_2343 PF06969 HemN C-terminal domain BF31_2344 PF01628 HrcA protein C terminal domain BF31_2345 PF01025 GrpE BF31_2346 PF00012 Hsp70 protein BF31_2347 PF00226 DnaJ domain BF31_2347 PF01556 DnaJ C terminal domain BF31_2347 PF00684 DnaJ central domain BF31_2349 PF04452 RNA methyltransferase BF31_235 PF00269 Small, acid-soluble spore proteins, alpha/beta type BF31_2350 PF01938 TRAM domain BF31_2350 PF04055 Radical SAM superfamily BF31_2350 PF00919 Uncharacterized protein family UPF0004 BF31_2351 PF01165 Ribosomal protein S21 BF31_2352 PF09424 Yqey-like protein BF31_2353 PF07873 YabP family BF31_2354 PF06898 Putative stage IV sporulation protein YqfD BF31_2355 PF02562 PhoH-like protein BF31_2356 PF01966 HD domain BF31_2356 PF07697 7TM-HD extracellular BF31_2356 PF07698 7TM receptor with intracellular HD hydrolase BF31_2357 PF02130 Uncharacterized protein family UPF0054 BF31_2358 PF01219 Prokaryotic diacylglycerol kinase BF31_2359 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BF31_236 PF00005 ABC transporter BF31_2360 PF07650 KH domain BF31_2360 PF01926 50S ribosome-binding GTPase BF31_2362 PF02565 Recombination protein O C terminal BF31_2362 PF11967 Recombination protein O N terminal BF31_2363 PF08279 HTH domain BF31_2363 PF00571 CBS domain BF31_2364 PF03618 Kinase/pyrophosphorylase BF31_2365 PF08275 DNA primase catalytic core, N-terminal domain BF31_2365 PF10410 DnaB-helicase binding domain of primase BF31_2365 PF01807 CHC2 zinc finger BF31_2366 PF03979 Sigma-70 factor, region 1.1 BF31_2366 PF00140 Sigma-70 factor, region 1.2 BF31_2366 PF04542 Sigma-70 region 2 BF31_2366 PF04539 Sigma-70 region 3 BF31_2366 PF04545 Sigma-70, region 4 BF31_2367 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BF31_2368 PF04816 tRNA (adenine(22)-N(1))-methyltransferase BF31_2369 PF01784 NIF3 (NGG1p interacting factor 3) BF31_237 PF00528 Binding-protein-dependent transport system inner membrane component BF31_2370 PF02401 LytB protein BF31_2372 PF00270 DEAD/DEAH box helicase BF31_2372 PF00271 Helicase conserved C-terminal domain BF31_2373 PF01261 Xylose isomerase-like TIM barrel BF31_2374 PF11116 Protein of unknown function (DUF2624) BF31_2375 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF31_2375 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF31_2376 PF00005 ABC transporter BF31_2377 PF00950 ABC 3 transport family BF31_2378 PF01475 Ferric uptake regulator family BF31_2379 PF04551 GcpE protein BF31_238 PF00497 Bacterial extracellular solute-binding proteins, family 3 BF31_2383 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BF31_2383 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BF31_2384 PF07690 Major Facilitator Superfamily BF31_2386 PF12849 PBP superfamily domain BF31_2387 PF00528 Binding-protein-dependent transport system inner membrane component BF31_2388 PF00528 Binding-protein-dependent transport system inner membrane component BF31_2389 PF00005 ABC transporter BF31_239 PF00005 ABC transporter BF31_239 PF00664 ABC transporter transmembrane region BF31_2390 PF01895 PhoU domain BF31_2391 PF00483 Nucleotidyl transferase BF31_2393 PF00471 Ribosomal protein L33 BF31_2394 PF01812 5-formyltetrahydrofolate cyclo-ligase family BF31_2395 PF06014 Bacterial protein of unknown function (DUF910) BF31_2396 PF00480 ROK family BF31_2397 PF10958 Protein of unknown function (DUF2759) BF31_2398 PF00753 Metallo-beta-lactamase superfamily BF31_24 PF03099 Biotin/lipoate A/B protein ligase family BF31_24 PF10437 Bacterial lipoate protein ligase C-terminus BF31_240 PF00664 ABC transporter transmembrane region BF31_240 PF00005 ABC transporter BF31_2400 PF01022 Bacterial regulatory protein, arsR family BF31_2402 PF01053 Cys/Met metabolism PLP-dependent enzyme BF31_2403 PF01053 Cys/Met metabolism PLP-dependent enzyme BF31_2404 PF02219 Methylenetetrahydrofolate reductase BF31_2404 PF02574 Homocysteine S-methyltransferase BF31_2405 PF02965 Vitamin B12 dependent methionine synthase, activation domain BF31_2405 PF00809 Pterin binding enzyme BF31_2405 PF02574 Homocysteine S-methyltransferase BF31_2405 PF02310 B12 binding domain BF31_2405 PF02607 B12 binding domain BF31_2406 PF04101 Glycosyltransferase family 28 C-terminal domain BF31_2406 PF03033 Glycosyltransferase family 28 N-terminal domain BF31_241 PF00005 ABC transporter BF31_241 PF00664 ABC transporter transmembrane region BF31_2413 PF00375 Sodium:dicarboxylate symporter family BF31_2414 PF11117 Protein of unknown function (DUF2626) BF31_2416 PF00437 Type II/IV secretion system protein BF31_2417 PF00482 Type II secretion system (T2SS), protein F BF31_2419 PF07963 Prokaryotic N-terminal methylation motif BF31_242 PF00171 Aldehyde dehydrogenase family BF31_2424 PF01202 Shikimate kinase BF31_2425 PF14038 YqzE-like protein BF31_2429 PF11079 Bacterial protein YqhG of unknown function BF31_2430 PF00271 Helicase conserved C-terminal domain BF31_2430 PF00176 SNF2 family N-terminal domain BF31_2431 PF08669 Glycine cleavage T-protein C-terminal barrel domain BF31_2431 PF01571 Aminomethyltransferase folate-binding domain BF31_2432 PF02347 Glycine cleavage system P-protein BF31_2433 PF02347 Glycine cleavage system P-protein BF31_2436 PF00392 Bacterial regulatory proteins, gntR family BF31_2437 PF00005 ABC transporter BF31_244 PF01177 Asp/Glu/Hydantoin racemase BF31_2444 PF00893 Small Multidrug Resistance protein BF31_2445 PF00893 Small Multidrug Resistance protein BF31_2447 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BF31_2447 PF00356 Bacterial regulatory proteins, lacI family BF31_2448 PF00581 Rhodanese-like domain BF31_2449 PF03099 Biotin/lipoate A/B protein ligase family BF31_245 PF13520 Amino acid permease BF31_2452 PF02742 Iron dependent repressor, metal binding and dimerisation domain BF31_2452 PF01325 Iron dependent repressor, N-terminal DNA binding domain BF31_2454 PF13419 Haloacid dehalogenase-like hydrolase BF31_2455 PF07136 Protein of unknown function (DUF1385) BF31_2456 PF11085 Conserved membrane protein YqhR BF31_2457 PF01220 Dehydroquinase class II BF31_2458 PF00557 Metallopeptidase family M24 BF31_2458 PF01321 Creatinase/Prolidase N-terminal domain BF31_2459 PF09285 Elongation factor P, C-terminal BF31_2459 PF08207 Elongation factor P (EF-P) KOW-like domain BF31_2459 PF01132 Elongation factor P (EF-P) OB domain BF31_2464 PF09548 Stage III sporulation protein AB (spore_III_AB) BF31_2465 PF06686 Stage III sporulation protein AC/AD protein family BF31_2466 PF06686 Stage III sporulation protein AC/AD protein family BF31_2467 PF09546 Stage III sporulation protein AE (spore_III_AE) BF31_2468 PF09581 Stage III sporulation protein AF (Spore_III_AF) BF31_247 PF06628 Catalase-related immune-responsive BF31_247 PF00199 Catalase BF31_247 PF18011 C-terminal domain found in long catalases BF31_2470 PF12685 SpoIIIAH-like protein BF31_2472 PF00364 Biotin-requiring enzyme BF31_2473 PF00289 Biotin carboxylase, N-terminal domain BF31_2473 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BF31_2473 PF02785 Biotin carboxylase C-terminal domain BF31_2474 PF03780 Asp23 family, cell envelope-related function BF31_2475 PF01029 NusB family BF31_2476 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BF31_2476 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BF31_2477 PF02601 Exonuclease VII, large subunit BF31_2477 PF13742 OB-fold nucleic acid binding domain BF31_2478 PF02609 Exonuclease VII small subunit BF31_2479 PF00348 Polyprenyl synthetase BF31_248 PF01965 DJ-1/PfpI family BF31_2480 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BF31_2480 PF02779 Transketolase, pyrimidine binding domain BF31_2480 PF02780 Transketolase, C-terminal domain BF31_2481 PF01479 S4 domain BF31_2481 PF01728 FtsJ-like methyltransferase BF31_2482 PF02863 Arginine repressor, C-terminal domain BF31_2482 PF01316 Arginine repressor, DNA binding domain BF31_2483 PF13476 AAA domain BF31_2484 PF05580 SpoIVB peptidase S55 BF31_2484 PF17820 PDZ domain BF31_2485 PF08769 Sporulation initiation factor Spo0A C terminal BF31_2485 PF00072 Response regulator receiver domain BF31_2487 PF14174 YycC-like protein BF31_2488 PF03009 Glycerophosphoryl diester phosphodiesterase family BF31_2490 PF00158 Sigma-54 interaction domain BF31_2490 PF02954 Bacterial regulatory protein, Fis family BF31_2490 PF00989 PAS fold BF31_2491 PF01515 Phosphate acetyl/butaryl transferase BF31_2492 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BF31_2492 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BF31_2493 PF00871 Acetokinase family BF31_2494 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF31_2494 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BF31_2495 PF00676 Dehydrogenase E1 component BF31_2496 PF02780 Transketolase, C-terminal domain BF31_2496 PF02779 Transketolase, pyrimidine binding domain BF31_2497 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BF31_2497 PF02817 e3 binding domain BF31_2497 PF00364 Biotin-requiring enzyme BF31_2498 PF01098 Cell cycle protein BF31_2499 PF09297 NADH pyrophosphatase zinc ribbon domain BF31_2499 PF00293 NUDIX domain BF31_25 PF12706 Beta-lactamase superfamily domain BF31_250 PF07690 Major Facilitator Superfamily BF31_2500 PF11208 Protein of unknown function (DUF2992) BF31_2501 PF06491 Disulphide isomerase BF31_2502 PF00497 Bacterial extracellular solute-binding proteins, family 3 BF31_2503 PF00528 Binding-protein-dependent transport system inner membrane component BF31_2504 PF00005 ABC transporter BF31_2505 PF06081 Aromatic acid exporter family member 1 BF31_2505 PF11728 Putative aromatic acid exporter C-terminal domain BF31_2506 PF03734 L,D-transpeptidase catalytic domain BF31_2508 PF13302 Acetyltransferase (GNAT) domain BF31_2509 PF07687 Peptidase dimerisation domain BF31_2509 PF01546 Peptidase family M20/M25/M40 BF31_251 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF31_251 PF12793 Sugar transport-related sRNA regulator N-term BF31_2511 PF00817 impB/mucB/samB family BF31_2511 PF11799 impB/mucB/samB family C-terminal domain BF31_2511 PF11798 IMS family HHH motif BF31_2513 PF12706 Beta-lactamase superfamily domain BF31_2513 PF00753 Metallo-beta-lactamase superfamily BF31_2514 PF03315 Serine dehydratase beta chain BF31_2514 PF01842 ACT domain BF31_2515 PF03313 Serine dehydratase alpha chain BF31_2516 PF14748 Pyrroline-5-carboxylate reductase dimerisation BF31_2516 PF03807 NADP oxidoreductase coenzyme F420-dependent BF31_2518 PF00753 Metallo-beta-lactamase superfamily BF31_2519 PF00106 short chain dehydrogenase BF31_252 PF02525 Flavodoxin-like fold BF31_2521 PF02774 Semialdehyde dehydrogenase, dimerisation domain BF31_2521 PF01118 Semialdehyde dehydrogenase, NAD binding domain BF31_2522 PF01960 ArgJ family BF31_2523 PF00696 Amino acid kinase family BF31_2524 PF00202 Aminotransferase class-III BF31_2525 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BF31_2525 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BF31_2528 PF13404 AsnC-type helix-turn-helix domain BF31_2528 PF01037 Lrp/AsnC ligand binding domain BF31_2530 PF00149 Calcineurin-like phosphoesterase BF31_2530 PF02872 5'-nucleotidase, C-terminal domain BF31_2533 PF00202 Aminotransferase class-III BF31_2535 PF00155 Aminotransferase class I and II BF31_2536 PF08241 Methyltransferase domain BF31_2536 PF12697 Alpha/beta hydrolase family BF31_2537 PF13847 Methyltransferase domain BF31_2538 PF06968 Biotin and Thiamin Synthesis associated domain BF31_2538 PF04055 Radical SAM superfamily BF31_2539 PF00885 6,7-dimethyl-8-ribityllumazine synthase BF31_254 PF01638 HxlR-like helix-turn-helix BF31_2541 PF00925 GTP cyclohydrolase II BF31_2541 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BF31_2542 PF00677 Lumazine binding domain BF31_2543 PF01872 RibD C-terminal domain BF31_2543 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BF31_2545 PF10827 Protein of unknown function (DUF2552) BF31_2546 PF12146 Serine aminopeptidase, S33 BF31_2547 PF00583 Acetyltransferase (GNAT) family BF31_2548 PF00356 Bacterial regulatory proteins, lacI family BF31_2549 PF13726 Na+-H+ antiporter family BF31_2549 PF03553 Na+/H+ antiporter family BF31_255 PF07690 Major Facilitator Superfamily BF31_2550 PF12146 Serine aminopeptidase, S33 BF31_2552 PF02872 5'-nucleotidase, C-terminal domain BF31_2552 PF00746 LPXTG cell wall anchor motif BF31_2552 PF00565 Staphylococcal nuclease homologue BF31_2552 PF00149 Calcineurin-like phosphoesterase BF31_2554 PF13673 Acetyltransferase (GNAT) domain BF31_2554 PF04229 GrpB protein BF31_2555 PF00248 Aldo/keto reductase family BF31_2556 PF00248 Aldo/keto reductase family BF31_2557 PF13072 Mother cell inhibitor of FtsZ BF31_2558 PF00293 NUDIX domain BF31_256 PF17934 Tetracyclin repressor-like, C-terminal domain BF31_256 PF00440 Bacterial regulatory proteins, tetR family BF31_2560 PF01944 Stage II sporulation protein M BF31_2561 PF01475 Ferric uptake regulator family BF31_2562 PF14004 Protein of unknown function (DUF4227) BF31_2563 PF02899 Phage integrase, N-terminal SAM-like domain BF31_2563 PF00589 Phage integrase family BF31_2565 PF01676 Metalloenzyme superfamily BF31_2566 PF01048 Phosphorylase superfamily BF31_2567 PF00591 Glycosyl transferase family, a/b domain BF31_2567 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BF31_2567 PF02885 Glycosyl transferase family, helical bundle domain BF31_2568 PF01544 CorA-like Mg2+ transporter protein BF31_2569 PF00860 Permease family BF31_257 PF00893 Small Multidrug Resistance protein BF31_2571 PF01047 MarR family BF31_2574 PF00005 ABC transporter BF31_2575 PF00392 Bacterial regulatory proteins, gntR family BF31_2576 PF07943 Penicillin-binding protein 5, C-terminal domain BF31_2576 PF00768 D-alanyl-D-alanine carboxypeptidase BF31_2577 PF01740 STAS domain BF31_2578 PF13581 Histidine kinase-like ATPase domain BF31_2579 PF04545 Sigma-70, region 4 BF31_2579 PF04542 Sigma-70 region 2 BF31_2579 PF04539 Sigma-70 region 3 BF31_258 PF00893 Small Multidrug Resistance protein BF31_2580 PF00209 Sodium:neurotransmitter symporter family BF31_2582 PF12164 Stage V sporulation protein AA BF31_2583 PF13782 Stage V sporulation protein AB BF31_2584 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BF31_2585 PF07451 Stage V sporulation protein AD (SpoVAD) BF31_2586 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BF31_2587 PF14097 Stage V sporulation protein AE1 BF31_2588 PF03323 Bacillus/Clostridium GerA spore germination protein BF31_2590 PF06207 Protein of unknown function (DUF1002) BF31_2591 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BF31_2592 PF00583 Acetyltransferase (GNAT) family BF31_2593 PF03745 Domain of unknown function (DUF309) BF31_2595 PF02616 Segregation and condensation protein ScpA BF31_2596 PF04079 Segregation and condensation complex subunit ScpB BF31_2598 PF01979 Amidohydrolase family BF31_2599 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BF31_26 PF14149 YhfH-like protein BF31_260 PF01037 Lrp/AsnC ligand binding domain BF31_2602 PF00874 PRD domain BF31_2602 PF03123 CAT RNA binding domain BF31_2603 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BF31_2603 PF02378 Phosphotransferase system, EIIC BF31_2603 PF00367 phosphotransferase system, EIIB BF31_2604 PF00381 PTS HPr component phosphorylation site BF31_2605 PF00391 PEP-utilising enzyme, mobile domain BF31_2605 PF05524 PEP-utilising enzyme, N-terminal BF31_2605 PF02896 PEP-utilising enzyme, TIM barrel domain BF31_2608 PF00881 Nitroreductase family BF31_2609 PF00990 Diguanylate cyclase, GGDEF domain BF31_261 PF00892 EamA-like transporter family BF31_2610 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BF31_2610 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BF31_2611 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BF31_2611 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BF31_2614 PF03079 ARD/ARD' family BF31_2615 PF00596 Class II Aldolase and Adducin N-terminal domain BF31_2617 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain BF31_2617 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain BF31_2618 PF00155 Aminotransferase class I and II BF31_2619 PF00795 Carbon-nitrogen hydrolase BF31_2620 PF01636 Phosphotransferase enzyme family BF31_2624 PF03551 Transcriptional regulator PadR-like family BF31_2630 PF00293 NUDIX domain BF31_2631 PF02803 Thiolase, C-terminal domain BF31_2631 PF00108 Thiolase, N-terminal domain BF31_2639 PF00005 ABC transporter BF31_2639 PF17912 MalK OB fold domain BF31_2639 PF03459 TOBE domain BF31_264 PF07681 DoxX BF31_2640 PF00128 Alpha amylase, catalytic domain BF31_2640 PF16657 Maltogenic Amylase, C-terminal domain BF31_2641 PF00128 Alpha amylase, catalytic domain BF31_2641 PF02903 Alpha amylase, N-terminal ig-like domain BF31_2641 PF16657 Maltogenic Amylase, C-terminal domain BF31_2642 PF13416 Bacterial extracellular solute-binding protein BF31_2643 PF00528 Binding-protein-dependent transport system inner membrane component BF31_2644 PF00528 Binding-protein-dependent transport system inner membrane component BF31_2645 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BF31_2645 PF00356 Bacterial regulatory proteins, lacI family BF31_2646 PF00155 Aminotransferase class I and II BF31_2648 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_2648 PF00512 His Kinase A (phospho-acceptor) domain BF31_2650 PF14040 Deoxyribonuclease NucA/NucB BF31_2652 PF01717 Cobalamin-independent synthase, Catalytic domain BF31_2652 PF08267 Cobalamin-independent synthase, N-terminal domain BF31_2654 PF07690 Major Facilitator Superfamily BF31_2659 PF14177 YkyB-like protein BF31_266 PF00367 phosphotransferase system, EIIB BF31_266 PF02378 Phosphotransferase system, EIIC BF31_2660 PF02541 Ppx/GppA phosphatase family BF31_2661 PF02503 Polyphosphate kinase middle domain BF31_2661 PF13089 Polyphosphate kinase N-terminal domain BF31_2661 PF13090 Polyphosphate kinase C-terminal domain 2 BF31_2661 PF17941 Polyphosphate kinase C-terminal domain 1 BF31_2663 PF10518 TAT (twin-arginine translocation) pathway signal sequence BF31_2663 PF00149 Calcineurin-like phosphoesterase BF31_2665 PF00563 EAL domain BF31_2665 PF10388 EAL-domain associated signalling protein domain BF31_2668 PF08796 Protein of unknown function (DUF1797) BF31_267 PF01380 SIS domain BF31_2670 PF04308 Ribonuclease H-like BF31_2673 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF31_2673 PF03466 LysR substrate binding domain BF31_2674 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal BF31_2674 PF00132 Bacterial transferase hexapeptide (six repeats) BF31_2674 PF14602 Hexapeptide repeat of succinyl-transferase BF31_2675 PF01546 Peptidase family M20/M25/M40 BF31_2675 PF07687 Peptidase dimerisation domain BF31_2677 PF02080 TrkA-C domain BF31_2677 PF02254 TrkA-N domain BF31_2678 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BF31_2678 PF17770 Ribonuclease J C-terminal domain BF31_2678 PF00753 Metallo-beta-lactamase superfamily BF31_268 PF01380 SIS domain BF31_268 PF01418 Helix-turn-helix domain, rpiR family BF31_2681 PF01327 Polypeptide deformylase BF31_2683 PF00676 Dehydrogenase E1 component BF31_2684 PF02779 Transketolase, pyrimidine binding domain BF31_2684 PF02780 Transketolase, C-terminal domain BF31_2685 PF00364 Biotin-requiring enzyme BF31_2685 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BF31_2685 PF02817 e3 binding domain BF31_2686 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF31_2686 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BF31_2694 PF01276 Orn/Lys/Arg decarboxylase, major domain BF31_2694 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BF31_2695 PF05256 Uncharacterised protein family (UPF0223) BF31_2696 PF06335 Protein of unknown function (DUF1054) BF31_2698 PF00459 Inositol monophosphatase family BF31_27 PF00356 Bacterial regulatory proteins, lacI family BF31_270 PF00999 Sodium/hydrogen exchanger family BF31_2701 PF14036 YlaH-like protein BF31_2703 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) BF31_2705 PF02562 PhoH-like protein BF31_2705 PF13638 PIN domain BF31_2707 PF07408 Protein of unknown function (DUF1507) BF31_2708 PF01098 Cell cycle protein BF31_2709 PF02436 Conserved carboxylase domain BF31_2709 PF00682 HMGL-like BF31_2709 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BF31_2709 PF02785 Biotin carboxylase C-terminal domain BF31_2709 PF00364 Biotin-requiring enzyme BF31_2709 PF00289 Biotin carboxylase, N-terminal domain BF31_271 PF13520 Amino acid permease BF31_2710 PF02628 Cytochrome oxidase assembly protein BF31_2711 PF01040 UbiA prenyltransferase family BF31_2712 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BF31_2712 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BF31_2712 PF00034 Cytochrome c BF31_2713 PF00115 Cytochrome C and Quinol oxidase polypeptide I BF31_2714 PF00510 Cytochrome c oxidase subunit III BF31_2715 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BF31_2716 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) BF31_2717 PF00795 Carbon-nitrogen hydrolase BF31_2718 PF08868 YugN-like family BF31_2719 PF14504 CAP-associated N-terminal BF31_2719 PF00188 Cysteine-rich secretory protein family BF31_2720 PF14071 Putative coat protein BF31_2721 PF14003 YlbE-like protein BF31_2722 PF00300 Histidine phosphatase superfamily (branch 1) BF31_2723 PF06133 Control of competence regulator ComK, YlbF/YmcA BF31_2724 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) BF31_2728 PF07670 Nucleoside recognition BF31_2729 PF01467 Cytidylyltransferase-like BF31_2730 PF01734 Patatin-like phospholipase BF31_2731 PF13180 PDZ domain BF31_2731 PF05362 Lon protease (S16) C-terminal proteolytic domain BF31_2732 PF05636 HIGH Nucleotidyl Transferase BF31_2733 PF00589 Phage integrase family BF31_2733 PF14659 Phage integrase, N-terminal SAM-like domain BF31_2737 PF01381 Helix-turn-helix BF31_2741 PF01381 Helix-turn-helix BF31_2747 PF07319 Primosomal protein DnaI N-terminus BF31_2747 PF01695 IstB-like ATP binding protein BF31_2752 PF04539 Sigma-70 region 3 BF31_2752 PF04545 Sigma-70, region 4 BF31_2752 PF04542 Sigma-70 region 2 BF31_2757 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF31_2767 PF00589 Phage integrase family BF31_2768 PF10137 Predicted nucleotide-binding protein containing TIR-like domain BF31_277 PF09335 SNARE associated Golgi protein BF31_2772 PF03354 Phage Terminase BF31_2774 PF00574 Clp protease BF31_279 PF02735 Ku70/Ku80 beta-barrel domain BF31_2791 PF05105 Bacteriophage holin family BF31_2792 PF12123 N-acetylmuramoyl-l-alanine amidase BF31_2792 PF01510 N-acetylmuramoyl-L-alanine amidase BF31_2801 PF02620 Large ribosomal RNA subunit accumulation protein YceD BF31_2802 PF01783 Ribosomal L32p protein family BF31_2804 PF00583 Acetyltransferase (GNAT) family BF31_2805 PF08546 Ketopantoate reductase PanE/ApbA C terminal BF31_2805 PF02558 Ketopantoate reductase PanE/ApbA BF31_2806 PF10079 Bacillithiol biosynthesis BshC BF31_2807 PF01795 MraW methylase family BF31_2808 PF04977 Septum formation initiator BF31_2810 PF00905 Penicillin binding protein transpeptidase domain BF31_2810 PF03793 PASTA domain BF31_2810 PF03717 Penicillin-binding Protein dimerisation domain BF31_2811 PF01225 Mur ligase family, catalytic domain BF31_2811 PF02875 Mur ligase family, glutamate ligase domain BF31_2811 PF08245 Mur ligase middle domain BF31_2812 PF00953 Glycosyl transferase family 4 BF31_2812 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BF31_2813 PF08245 Mur ligase middle domain BF31_2813 PF02875 Mur ligase family, glutamate ligase domain BF31_2814 PF01098 Cell cycle protein BF31_2815 PF03033 Glycosyltransferase family 28 N-terminal domain BF31_2815 PF04101 Glycosyltransferase family 28 C-terminal domain BF31_2816 PF01565 FAD binding domain BF31_2816 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BF31_2817 PF03799 Cell division protein FtsQ BF31_2817 PF08478 POTRA domain, FtsQ-type BF31_2818 PF02491 SHS2 domain inserted in FTSA BF31_2819 PF00091 Tubulin/FtsZ family, GTPase domain BF31_2819 PF12327 FtsZ family, C-terminal domain BF31_282 PF11007 Spore coat associated protein JA (CotJA) BF31_2820 PF03419 Sporulation factor SpoIIGA BF31_2821 PF04542 Sigma-70 region 2 BF31_2821 PF04545 Sigma-70, region 4 BF31_2822 PF04545 Sigma-70, region 4 BF31_2822 PF04539 Sigma-70 region 3 BF31_2822 PF04542 Sigma-70 region 2 BF31_2823 PF05239 PRC-barrel domain BF31_2825 PF01168 Alanine racemase, N-terminal domain BF31_2826 PF04472 Cell division protein SepF BF31_2827 PF02325 YGGT family BF31_2828 PF17774 Putative RNA-binding domain in YlmH BF31_2828 PF01479 S4 domain BF31_2829 PF05103 DivIVA protein BF31_283 PF12652 CotJB protein BF31_2830 PF06827 Zinc finger found in FPG and IleRS BF31_2830 PF00133 tRNA synthetases class I (I, L, M and V) BF31_2830 PF08264 Anticodon-binding domain of tRNA BF31_2832 PF01252 Signal peptidase (SPase) II BF31_2833 PF00849 RNA pseudouridylate synthase BF31_2833 PF01479 S4 domain BF31_2834 PF00156 Phosphoribosyl transferase domain BF31_2835 PF00860 Permease family BF31_2836 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BF31_2836 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BF31_2837 PF01979 Amidohydrolase family BF31_2838 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BF31_2838 PF00117 Glutamine amidotransferase class-I BF31_2839 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BF31_2839 PF02142 MGS-like domain BF31_2839 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BF31_284 PF05067 Manganese containing catalase BF31_2840 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B BF31_2840 PF00175 Oxidoreductase NAD-binding domain BF31_2841 PF01180 Dihydroorotate dehydrogenase BF31_2842 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BF31_2843 PF00156 Phosphoribosyl transferase domain BF31_2849 PF01321 Creatinase/Prolidase N-terminal domain BF31_2849 PF00557 Metallopeptidase family M24 BF31_285 PF05525 Branched-chain amino acid transport protein BF31_2851 PF00689 Cation transporting ATPase, C-terminus BF31_2851 PF00690 Cation transporter/ATPase, N-terminus BF31_2852 PF08340 Domain of unknown function (DUF1732) BF31_2852 PF03755 YicC-like family, N-terminal region BF31_2853 PF04025 Domain of unknown function (DUF370) BF31_2854 PF00625 Guanylate kinase BF31_2855 PF01192 RNA polymerase Rpb6 BF31_2856 PF02441 Flavoprotein BF31_2856 PF04127 DNA / pantothenate metabolism flavoprotein BF31_2857 PF17764 3′ DNA-binding domain (3′BD) BF31_2857 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BF31_2857 PF00271 Helicase conserved C-terminal domain BF31_2857 PF18074 Primosomal protein N C-terminal domain BF31_2857 PF04851 Type III restriction enzyme, res subunit BF31_2858 PF01327 Polypeptide deformylase BF31_2859 PF00551 Formyl transferase BF31_2859 PF02911 Formyl transferase, C-terminal domain BF31_2860 PF01029 NusB family BF31_2860 PF01189 16S rRNA methyltransferase RsmB/F BF31_2861 PF04055 Radical SAM superfamily BF31_2863 PF03793 PASTA domain BF31_2863 PF00069 Protein kinase domain BF31_2864 PF16745 RsgA N-terminal domain BF31_2864 PF03193 RsgA GTPase BF31_2865 PF00834 Ribulose-phosphate 3 epimerase family BF31_2866 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain BF31_2866 PF04263 Thiamin pyrophosphokinase, catalytic domain BF31_2867 PF00830 Ribosomal L28 family BF31_2868 PF03780 Asp23 family, cell envelope-related function BF31_2869 PF02734 DAK2 domain BF31_2869 PF13684 Dihydroxyacetone kinase family BF31_2870 PF00270 DEAD/DEAH box helicase BF31_2870 PF17191 RecG wedge domain BF31_2870 PF00271 Helicase conserved C-terminal domain BF31_2871 PF03061 Thioesterase superfamily BF31_2872 PF02504 Fatty acid synthesis protein BF31_2873 PF00698 Acyl transferase domain BF31_2875 PF00550 Phosphopantetheine attachment site BF31_2876 PF00035 Double-stranded RNA binding motif BF31_2876 PF14622 Ribonuclease-III-like BF31_2877 PF02463 RecF/RecN/SMC N terminal domain BF31_2877 PF06470 SMC proteins Flexible Hinge Domain BF31_2878 PF00448 SRP54-type protein, GTPase domain BF31_2878 PF02881 SRP54-type protein, helical bundle domain BF31_2879 PF04297 Putative helix-turn-helix protein, YlxM / p13 like BF31_288 PF09529 Integral membrane protein (intg_mem_TP0381) BF31_2880 PF02881 SRP54-type protein, helical bundle domain BF31_2880 PF02978 Signal peptide binding domain BF31_2880 PF00448 SRP54-type protein, GTPase domain BF31_2881 PF00886 Ribosomal protein S16 BF31_2883 PF01782 RimM N-terminal domain BF31_2883 PF05239 PRC-barrel domain BF31_2884 PF01746 tRNA (Guanine-1)-methyltransferase BF31_2885 PF01245 Ribosomal protein L19 BF31_2886 PF10502 Signal peptidase, peptidase S26 BF31_2887 PF01926 50S ribosome-binding GTPase BF31_2888 PF01351 Ribonuclease HII BF31_2889 PF00549 CoA-ligase BF31_2889 PF08442 ATP-grasp domain BF31_2890 PF00549 CoA-ligase BF31_2890 PF02629 CoA binding domain BF31_2892 PF01131 DNA topoisomerase BF31_2892 PF01396 Topoisomerase DNA binding C4 zinc finger BF31_2892 PF01751 Toprim domain BF31_2893 PF01134 Glucose inhibited division protein A BF31_2894 PF02899 Phage integrase, N-terminal SAM-like domain BF31_2894 PF00589 Phage integrase family BF31_2895 PF00227 Proteasome subunit BF31_2896 PF07724 AAA domain (Cdc48 subfamily) BF31_2896 PF10431 C-terminal, D2-small domain, of ClpB protein BF31_2896 PF00004 ATPase family associated with various cellular activities (AAA) BF31_2897 PF06018 CodY GAF-like domain BF31_2897 PF08222 CodY helix-turn-helix domain BF31_2898 PF00318 Ribosomal protein S2 BF31_2899 PF00889 Elongation factor TS BF31_290 PF00005 ABC transporter BF31_2900 PF00696 Amino acid kinase family BF31_2901 PF01765 Ribosome recycling factor BF31_2902 PF01255 Putative undecaprenyl diphosphate synthase BF31_2904 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BF31_2904 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BF31_2904 PF13288 DXP reductoisomerase C-terminal domain BF31_2905 PF17820 PDZ domain BF31_2905 PF02163 Peptidase family M50 BF31_2906 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BF31_2906 PF04073 Aminoacyl-tRNA editing domain BF31_2906 PF03129 Anticodon binding domain BF31_2907 PF00929 Exonuclease BF31_2907 PF02811 PHP domain BF31_2907 PF14579 Helix-hairpin-helix motif BF31_2907 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BF31_2907 PF07733 Bacterial DNA polymerase III alpha NTPase domain BF31_2907 PF11490 DNA polymerase III polC-type N-terminus II BF31_2907 PF14480 DNA polymerase III polC-type N-terminus I BF31_2908 PF02576 RimP N-terminal domain BF31_2908 PF17384 RimP C-terminal SH3 domain BF31_2909 PF00575 S1 RNA binding domain BF31_2909 PF08529 NusA N-terminal domain BF31_2909 PF13184 NusA-like KH domain BF31_291 PF12704 MacB-like periplasmic core domain BF31_291 PF02687 FtsX-like permease family BF31_2910 PF04296 Protein of unknown function (DUF448) BF31_2911 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BF31_2912 PF04760 Translation initiation factor IF-2, N-terminal region BF31_2912 PF11987 Translation-initiation factor 2 BF31_2912 PF00009 Elongation factor Tu GTP binding domain BF31_2913 PF04456 Protein of unknown function (DUF503) BF31_2914 PF02033 Ribosome-binding factor A BF31_2915 PF16198 tRNA pseudouridylate synthase B C-terminal domain BF31_2915 PF01509 TruB family pseudouridylate synthase (N terminal domain) BF31_2916 PF06574 FAD synthetase BF31_2916 PF01687 Riboflavin kinase BF31_2917 PF00312 Ribosomal protein S15 BF31_2918 PF00013 KH domain BF31_2918 PF00575 S1 RNA binding domain BF31_2918 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BF31_2918 PF03725 3' exoribonuclease family, domain 2 BF31_2918 PF01138 3' exoribonuclease family, domain 1 BF31_2919 PF01522 Polysaccharide deacetylase BF31_292 PF01476 LysM domain BF31_292 PF06725 3D domain BF31_2920 PF00675 Insulinase (Peptidase family M16) BF31_2920 PF05193 Peptidase M16 inactive domain BF31_2921 PF05239 PRC-barrel domain BF31_2922 PF16924 Dipicolinate synthase subunit A N-terminal domain BF31_2922 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BF31_2923 PF02441 Flavoprotein BF31_2924 PF02774 Semialdehyde dehydrogenase, dimerisation domain BF31_2924 PF01118 Semialdehyde dehydrogenase, NAD binding domain BF31_2925 PF13840 ACT domain BF31_2925 PF00696 Amino acid kinase family BF31_2926 PF00701 Dihydrodipicolinate synthetase family BF31_2927 PF00753 Metallo-beta-lactamase superfamily BF31_2927 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BF31_2927 PF17770 Ribonuclease J C-terminal domain BF31_2928 PF00574 Clp protease BF31_2929 PF14035 YlzJ-like protein BF31_2930 PF09397 Ftsk gamma domain BF31_2930 PF17854 FtsK alpha domain BF31_2930 PF01580 FtsK/SpoIIIE family BF31_2931 PF00392 Bacterial regulatory proteins, gntR family BF31_2931 PF07702 UTRA domain BF31_2937 PF05193 Peptidase M16 inactive domain BF31_2938 PF05193 Peptidase M16 inactive domain BF31_2938 PF00675 Insulinase (Peptidase family M16) BF31_2940 PF11588 Protein of unknown function (DUF3243) BF31_2941 PF11868 Protein of unknown function (DUF3388) BF31_2942 PF13464 Domain of unknown function (DUF4115) BF31_2943 PF01066 CDP-alcohol phosphatidyltransferase BF31_2944 PF02464 Competence-damaged protein BF31_2944 PF00994 Probable molybdopterin binding domain BF31_2944 PF18146 Damage-inducible protein CinA KH domain BF31_2945 PF00154 recA bacterial DNA recombination protein BF31_2946 PF00154 recA bacterial DNA recombination protein BF31_2947 PF12072 Domain of unknown function (DUF3552) BF31_2947 PF00013 KH domain BF31_2947 PF01966 HD domain BF31_2948 PF13277 YmdB-like protein BF31_2949 PF04232 Stage V sporulation protein S (SpoVS) BF31_295 PF02378 Phosphotransferase system, EIIC BF31_2950 PF01244 Membrane dipeptidase (Peptidase family M19) BF31_2951 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II BF31_2951 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase BF31_2951 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg BF31_2952 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BF31_2953 PF04055 Radical SAM superfamily BF31_2953 PF01938 TRAM domain BF31_2953 PF00919 Uncharacterized protein family UPF0004 BF31_2954 PF06133 Control of competence regulator ComK, YlbF/YmcA BF31_2955 PF10628 Outer spore coat protein E (CotE) BF31_2956 PF05192 MutS domain III BF31_2956 PF00488 MutS domain V BF31_2956 PF01624 MutS domain I BF31_2956 PF05188 MutS domain II BF31_2956 PF05190 MutS family domain IV BF31_2957 PF08676 MutL C terminal dimerisation domain BF31_2957 PF01119 DNA mismatch repair protein, C-terminal domain BF31_2958 PF00005 ABC transporter BF31_296 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BF31_2961 PF00486 Transcriptional regulatory protein, C terminal BF31_2961 PF00072 Response regulator receiver domain BF31_2962 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_2962 PF00512 His Kinase A (phospho-acceptor) domain BF31_2963 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family BF31_2965 PF00350 Dynamin family BF31_2966 PF00884 Sulfatase BF31_2967 PF03275 UDP-galactopyranose mutase BF31_2968 PF07486 Cell Wall Hydrolase BF31_2969 PF00082 Subtilase family BF31_297 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BF31_2970 PF00388 Phosphatidylinositol-specific phospholipase C, X domain BF31_2972 PF02585 GlcNAc-PI de-N-acetylase BF31_2973 PF00561 alpha/beta hydrolase fold BF31_2973 PF00364 Biotin-requiring enzyme BF31_2974 PF00155 Aminotransferase class I and II BF31_2974 PF00392 Bacterial regulatory proteins, gntR family BF31_2975 PF03788 LrgA family BF31_2976 PF04172 LrgB-like family BF31_2977 PF10787 Uncharacterised protein from bacillus cereus group BF31_2979 PF03707 Bacterial signalling protein N terminal repeat BF31_2979 PF00990 Diguanylate cyclase, GGDEF domain BF31_2979 PF00563 EAL domain BF31_298 PF05043 Mga helix-turn-helix domain BF31_298 PF00874 PRD domain BF31_298 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BF31_298 PF08279 HTH domain BF31_2980 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF31_2981 PF00561 alpha/beta hydrolase fold BF31_2985 PF07687 Peptidase dimerisation domain BF31_2985 PF01546 Peptidase family M20/M25/M40 BF31_2986 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain BF31_2986 PF00730 HhH-GPD superfamily base excision DNA repair protein BF31_2987 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BF31_2987 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BF31_2988 PF02805 Metal binding domain of Ada BF31_2988 PF12833 Helix-turn-helix domain BF31_2989 PF03372 Endonuclease/Exonuclease/phosphatase family BF31_2991 PF01497 Periplasmic binding protein BF31_2992 PF01032 FecCD transport family BF31_2993 PF01032 FecCD transport family BF31_2994 PF00005 ABC transporter BF31_2995 PF00756 Putative esterase BF31_2997 PF02583 Metal-sensitive transcriptional repressor BF31_2998 PF00403 Heavy-metal-associated domain BF31_2999 PF00403 Heavy-metal-associated domain BF31_300 PF07690 Major Facilitator Superfamily BF31_3000 PF00216 Bacterial DNA-binding protein BF31_3001 PF01226 Formate/nitrite transporter BF31_3002 PF00149 Calcineurin-like phosphoesterase BF31_3002 PF10518 TAT (twin-arginine translocation) pathway signal sequence BF31_3004 PF00041 Fibronectin type III domain BF31_3004 PF00704 Glycosyl hydrolases family 18 BF31_3005 PF00324 Amino acid permease BF31_3008 PF04238 Protein of unknown function (DUF420) BF31_3009 PF00465 Iron-containing alcohol dehydrogenase BF31_301 PF02690 Na+/Pi-cotransporter BF31_3010 PF00465 Iron-containing alcohol dehydrogenase BF31_3011 PF08220 DeoR-like helix-turn-helix domain BF31_3011 PF00455 DeoR C terminal sensor domain BF31_3012 PF00294 pfkB family carbohydrate kinase BF31_3013 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BF31_3013 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BF31_3014 PF06725 3D domain BF31_3014 PF01476 LysM domain BF31_3017 PF17209 Hfq protein BF31_302 PF08240 Alcohol dehydrogenase GroES-like domain BF31_302 PF00107 Zinc-binding dehydrogenase BF31_3021 PF00004 ATPase family associated with various cellular activities (AAA) BF31_3021 PF17866 AAA lid domain BF31_3022 PF03458 UPF0126 domain BF31_3023 PF16360 GTP-binding GTPase Middle Region BF31_3023 PF13167 GTP-binding GTPase N-terminal BF31_3023 PF01926 50S ribosome-binding GTPase BF31_3024 PF16360 GTP-binding GTPase Middle Region BF31_3024 PF13167 GTP-binding GTPase N-terminal BF31_3024 PF01926 50S ribosome-binding GTPase BF31_3025 PF06838 Methionine gamma-lyase BF31_3026 PF13411 MerR HTH family regulatory protein BF31_3027 PF00120 Glutamine synthetase, catalytic domain BF31_3027 PF03951 Glutamine synthetase, beta-Grasp domain BF31_3028 PF02899 Phage integrase, N-terminal SAM-like domain BF31_3028 PF00589 Phage integrase family BF31_303 PF03816 Cell envelope-related transcriptional attenuator domain BF31_3032 PF01381 Helix-turn-helix BF31_3047 PF00145 C-5 cytosine-specific DNA methylase BF31_3048 PF02511 Thymidylate synthase complementing protein BF31_305 PF01925 Sulfite exporter TauE/SafE BF31_3056 PF08281 Sigma-70, region 4 BF31_306 PF13686 DsrE/DsrF/DrsH-like family BF31_308 PF00581 Rhodanese-like domain BF31_3088 PF05105 Bacteriophage holin family BF31_3089 PF01510 N-acetylmuramoyl-L-alanine amidase BF31_3089 PF01476 LysM domain BF31_3089 PF01471 Putative peptidoglycan binding domain BF31_3097 PF03551 Transcriptional regulator PadR-like family BF31_310 PF01206 Sulfurtransferase TusA BF31_3100 PF00717 Peptidase S24-like BF31_3100 PF01726 LexA DNA binding domain BF31_3101 PF00239 Resolvase, N terminal domain BF31_3102 PF05979 Bacterial protein of unknown function (DUF896) BF31_3103 PF02872 5'-nucleotidase, C-terminal domain BF31_3103 PF00149 Calcineurin-like phosphoesterase BF31_3106 PF00005 ABC transporter BF31_3107 PF00528 Binding-protein-dependent transport system inner membrane component BF31_3108 PF00528 Binding-protein-dependent transport system inner membrane component BF31_3109 PF01385 Probable transposase BF31_3109 PF12323 Helix-turn-helix domain BF31_3109 PF07282 Putative transposase DNA-binding domain BF31_311 PF00753 Metallo-beta-lactamase superfamily BF31_311 PF00581 Rhodanese-like domain BF31_3110 PF02780 Transketolase, C-terminal domain BF31_3110 PF02779 Transketolase, pyrimidine binding domain BF31_3110 PF00456 Transketolase, thiamine diphosphate binding domain BF31_3111 PF10747 Sporulation inhibitor of replication protein SirA BF31_3112 PF03672 Uncharacterised protein family (UPF0154) BF31_3113 PF00664 ABC transporter transmembrane region BF31_3113 PF00005 ABC transporter BF31_3114 PF00005 ABC transporter BF31_3114 PF00664 ABC transporter transmembrane region BF31_3117 PF01471 Putative peptidoglycan binding domain BF31_3117 PF01510 N-acetylmuramoyl-L-alanine amidase BF31_3119 PF01925 Sulfite exporter TauE/SafE BF31_312 PF01206 Sulfurtransferase TusA BF31_312 PF00581 Rhodanese-like domain BF31_3121 PF00293 NUDIX domain BF31_3121 PF13344 Haloacid dehalogenase-like hydrolase BF31_3122 PF04172 LrgB-like family BF31_3123 PF03788 LrgA family BF31_3124 PF03466 LysR substrate binding domain BF31_3124 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF31_3126 PF02683 Cytochrome C biogenesis protein transmembrane region BF31_3127 PF07301 Protein of unknown function (DUF1453) BF31_313 PF02583 Metal-sensitive transcriptional repressor BF31_3133 PF11084 Protein of unknown function (DUF2621) BF31_3137 PF01209 ubiE/COQ5 methyltransferase family BF31_3138 PF09021 HutP BF31_3139 PF00221 Aromatic amino acid lyase BF31_314 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BF31_314 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF31_3140 PF01175 Urocanase Rossmann-like domain BF31_3140 PF17392 Urocanase C-terminal domain BF31_3140 PF17391 Urocanase N-terminal domain BF31_3141 PF01979 Amidohydrolase family BF31_3142 PF00491 Arginase family BF31_3143 PF02559 CarD-like/TRCF domain BF31_3144 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BF31_3145 PF01645 Conserved region in glutamate synthase BF31_3146 PF00474 Sodium:solute symporter family BF31_3147 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF31_3148 PF01738 Dienelactone hydrolase family BF31_3149 PF00512 His Kinase A (phospho-acceptor) domain BF31_3149 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_3149 PF13188 PAS domain BF31_3149 PF00989 PAS fold BF31_3149 PF13426 PAS domain BF31_3151 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF31_3151 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF31_3157 PF05532 CsbD-like BF31_3160 PF13193 AMP-binding enzyme C-terminal domain BF31_3160 PF00501 AMP-binding enzyme BF31_3161 PF02632 BioY family BF31_3162 PF00501 AMP-binding enzyme BF31_3162 PF13193 AMP-binding enzyme C-terminal domain BF31_3163 PF00108 Thiolase, N-terminal domain BF31_3163 PF02803 Thiolase, C-terminal domain BF31_3165 PF13344 Haloacid dehalogenase-like hydrolase BF31_3165 PF00293 NUDIX domain BF31_3166 PF02272 DHHA1 domain BF31_3166 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BF31_3166 PF01411 tRNA synthetases class II (A) BF31_3168 PF07690 Major Facilitator Superfamily BF31_3171 PF01522 Polysaccharide deacetylase BF31_3173 PF00330 Aconitase family (aconitate hydratase) BF31_3173 PF00694 Aconitase C-terminal domain BF31_3174 PF00005 ABC transporter BF31_3174 PF00664 ABC transporter transmembrane region BF31_3174 PF03412 Peptidase C39 family BF31_3176 PF00578 AhpC/TSA family BF31_3177 PF02811 PHP domain BF31_3177 PF11490 DNA polymerase III polC-type N-terminus II BF31_3177 PF01336 OB-fold nucleic acid binding domain BF31_3177 PF00929 Exonuclease BF31_3177 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BF31_3177 PF07733 Bacterial DNA polymerase III alpha NTPase domain BF31_3177 PF14579 Helix-hairpin-helix motif BF31_3178 PF13040 Fur-regulated basic protein B BF31_3179 PF08177 Small acid-soluble spore protein N family BF31_3181 PF00704 Glycosyl hydrolases family 18 BF31_3181 PF01476 LysM domain BF31_3182 PF03061 Thioesterase superfamily BF31_3183 PF01521 Iron-sulphur cluster biosynthesis BF31_3184 PF02660 Glycerol-3-phosphate acyltransferase BF31_3185 PF03477 ATP cone domain BF31_3185 PF13597 Anaerobic ribonucleoside-triphosphate reductase BF31_3186 PF04055 Radical SAM superfamily BF31_3187 PF00486 Transcriptional regulatory protein, C terminal BF31_3187 PF00072 Response regulator receiver domain BF31_3188 PF13180 PDZ domain BF31_3189 PF13380 CoA binding domain BF31_319 PF04293 SpoVR like protein BF31_3190 PF01751 Toprim domain BF31_3190 PF00204 DNA gyrase B BF31_3190 PF00986 DNA gyrase B subunit, carboxyl terminus BF31_3190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_3191 PF00521 DNA gyrase/topoisomerase IV, subunit A BF31_3191 PF03989 DNA gyrase C-terminal domain, beta-propeller BF31_3192 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BF31_3192 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BF31_3194 PF00005 ABC transporter BF31_3194 PF13732 Domain of unknown function (DUF4162) BF31_3198 PF04542 Sigma-70 region 2 BF31_3198 PF08281 Sigma-70, region 4 BF31_320 PF00881 Nitroreductase family BF31_3200 PF03816 Cell envelope-related transcriptional attenuator domain BF31_3201 PF00375 Sodium:dicarboxylate symporter family BF31_3202 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF31_3203 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF31_3204 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF31_3205 PF08241 Methyltransferase domain BF31_3213 PF03323 Bacillus/Clostridium GerA spore germination protein BF31_3215 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BF31_3215 PF00384 Molybdopterin oxidoreductase BF31_3215 PF01568 Molydopterin dinucleotide binding domain BF31_3215 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BF31_3215 PF00037 4Fe-4S binding domain BF31_3216 PF07849 Protein of unknown function (DUF1641) BF31_3217 PF10057 Uncharacterized conserved protein (DUF2294) BF31_3218 PF02634 FdhD/NarQ family BF31_3219 PF04055 Radical SAM superfamily BF31_3219 PF06463 Molybdenum Cofactor Synthesis C BF31_3220 PF01226 Formate/nitrite transporter BF31_3221 PF00899 ThiF family BF31_3222 PF00994 Probable molybdopterin binding domain BF31_3222 PF03453 MoeA N-terminal region (domain I and II) BF31_3222 PF03454 MoeA C-terminal region (domain IV) BF31_3223 PF02391 MoaE protein BF31_3225 PF10609 NUBPL iron-transfer P-loop NTPase BF31_3228 PF06961 Protein of unknown function (DUF1294) BF31_3229 PF00892 EamA-like transporter family BF31_323 PF03323 Bacillus/Clostridium GerA spore germination protein BF31_3230 PF02681 Divergent PAP2 family BF31_3231 PF13243 Squalene-hopene cyclase C-terminal domain BF31_3231 PF13249 Squalene-hopene cyclase N-terminal domain BF31_3232 PF14151 YfhD-like protein BF31_3234 PF00171 Aldehyde dehydrogenase family BF31_3236 PF00474 Sodium:solute symporter family BF31_3237 PF01156 Inosine-uridine preferring nucleoside hydrolase BF31_3239 PF00206 Lyase BF31_3239 PF14698 Argininosuccinate lyase C-terminal BF31_3241 PF00106 short chain dehydrogenase BF31_3243 PF00132 Bacterial transferase hexapeptide (six repeats) BF31_3245 PF00293 NUDIX domain BF31_3247 PF00258 Flavodoxin BF31_3249 PF00313 'Cold-shock' DNA-binding domain BF31_325 PF03845 Spore germination protein BF31_3253 PF13037 Domain of unknown function (DUF3898) BF31_3253 PF13039 Protein of unknown function (DUF3900) BF31_3255 PF04294 VanW like protein BF31_3256 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF31_3258 PF02308 MgtC family BF31_3259 PF01752 Collagenase BF31_3259 PF08453 Peptidase family M9 N-terminal BF31_3259 PF18496 Collagenase G catalytic helper subdomain BF31_3260 PF00378 Enoyl-CoA hydratase/isomerase BF31_3261 PF00535 Glycosyl transferase family 2 BF31_3262 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BF31_3263 PF00132 Bacterial transferase hexapeptide (six repeats) BF31_3267 PF02913 FAD linked oxidases, C-terminal domain BF31_3267 PF01565 FAD binding domain BF31_3268 PF01758 Sodium Bile acid symporter family BF31_327 PF14148 YhdB-like protein BF31_3270 PF04229 GrpB protein BF31_3271 PF04299 Putative FMN-binding domain BF31_3274 PF18801 response regulator aspartate phosphatase H, N terminal BF31_3275 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BF31_3276 PF08240 Alcohol dehydrogenase GroES-like domain BF31_3276 PF00107 Zinc-binding dehydrogenase BF31_3277 PF01022 Bacterial regulatory protein, arsR family BF31_3278 PF01494 FAD binding domain BF31_328 PF02600 Disulfide bond formation protein DsbB BF31_3281 PF03009 Glycerophosphoryl diester phosphodiesterase family BF31_3284 PF03466 LysR substrate binding domain BF31_3284 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF31_3285 PF07690 Major Facilitator Superfamily BF31_3287 PF00144 Beta-lactamase BF31_3288 PF08439 Oligopeptidase F BF31_3288 PF01432 Peptidase family M3 BF31_3289 PF00797 N-acetyltransferase BF31_329 PF00085 Thioredoxin BF31_3290 PF09154 Domain of unknown function (DUF1939) BF31_3290 PF00128 Alpha amylase, catalytic domain BF31_3292 PF00488 MutS domain V BF31_3292 PF01713 Smr domain BF31_3295 PF00107 Zinc-binding dehydrogenase BF31_3295 PF08240 Alcohol dehydrogenase GroES-like domain BF31_3296 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF31_3296 PF03466 LysR substrate binding domain BF31_3298 PF10901 Protein of unknown function (DUF2690) BF31_33 PF00440 Bacterial regulatory proteins, tetR family BF31_33 PF17932 Tetracyclin repressor-like, C-terminal domain BF31_3301 PF13170 Protein of unknown function (DUF4003) BF31_3302 PF02567 Phenazine biosynthesis-like protein BF31_3303 PF05675 Protein of unknown function (DUF817) BF31_3304 PF01032 FecCD transport family BF31_3305 PF01032 FecCD transport family BF31_3307 PF01497 Periplasmic binding protein BF31_331 PF00356 Bacterial regulatory proteins, lacI family BF31_331 PF13407 Periplasmic binding protein domain BF31_3311 PF03600 Citrate transporter BF31_3312 PF08830 Protein of unknown function (DUF1806) BF31_3313 PF02585 GlcNAc-PI de-N-acetylase BF31_3318 PF07690 Major Facilitator Superfamily BF31_3319 PF00324 Amino acid permease BF31_332 PF00367 phosphotransferase system, EIIB BF31_332 PF02378 Phosphotransferase system, EIIC BF31_3320 PF00107 Zinc-binding dehydrogenase BF31_3320 PF08240 Alcohol dehydrogenase GroES-like domain BF31_3321 PF00753 Metallo-beta-lactamase superfamily BF31_3329 PF00144 Beta-lactamase BF31_333 PF08244 Glycosyl hydrolases family 32 C terminal BF31_333 PF00251 Glycosyl hydrolases family 32 N-terminal domain BF31_3334 PF01183 Glycosyl hydrolases family 25 BF31_3334 PF01471 Putative peptidoglycan binding domain BF31_3335 PF00753 Metallo-beta-lactamase superfamily BF31_3338 PF03063 Prismane/CO dehydrogenase family BF31_334 PF00294 pfkB family carbohydrate kinase BF31_3341 PF13732 Domain of unknown function (DUF4162) BF31_3341 PF00005 ABC transporter BF31_3342 PF01061 ABC-2 type transporter BF31_3343 PF05656 Protein of unknown function (DUF805) BF31_3347 PF00440 Bacterial regulatory proteins, tetR family BF31_3349 PF00535 Glycosyl transferase family 2 BF31_3349 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 BF31_3350 PF04542 Sigma-70 region 2 BF31_3351 PF12791 Anti-sigma factor N-terminus BF31_3353 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain BF31_3353 PF01522 Polysaccharide deacetylase BF31_3354 PF01022 Bacterial regulatory protein, arsR family BF31_3357 PF01638 HxlR-like helix-turn-helix BF31_3358 PF02525 Flavodoxin-like fold BF31_3360 PF13193 AMP-binding enzyme C-terminal domain BF31_3360 PF00501 AMP-binding enzyme BF31_3364 PF02567 Phenazine biosynthesis-like protein BF31_3370 PF00248 Aldo/keto reductase family BF31_3371 PF01638 HxlR-like helix-turn-helix BF31_3372 PF01638 HxlR-like helix-turn-helix BF31_3375 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BF31_3375 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BF31_3376 PF07702 UTRA domain BF31_3376 PF00392 Bacterial regulatory proteins, gntR family BF31_3377 PF01638 HxlR-like helix-turn-helix BF31_3378 PF03960 ArsC family BF31_3384 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF31_3385 PF03928 Haem-degrading BF31_3387 PF07690 Major Facilitator Superfamily BF31_3388 PF00248 Aldo/keto reductase family BF31_339 PF00860 Permease family BF31_3392 PF03413 Peptidase propeptide and YPEB domain BF31_3392 PF02868 Thermolysin metallopeptidase, alpha-helical domain BF31_3392 PF01447 Thermolysin metallopeptidase, catalytic domain BF31_3392 PF07504 Fungalysin/Thermolysin Propeptide Motif BF31_3393 PF00106 short chain dehydrogenase BF31_3394 PF08659 KR domain BF31_3394 PF14765 Polyketide synthase dehydratase BF31_3394 PF08240 Alcohol dehydrogenase GroES-like domain BF31_3394 PF16197 Ketoacyl-synthetase C-terminal extension BF31_3394 PF00107 Zinc-binding dehydrogenase BF31_3394 PF00550 Phosphopantetheine attachment site BF31_3394 PF00698 Acyl transferase domain BF31_3394 PF00109 Beta-ketoacyl synthase, N-terminal domain BF31_3394 PF02801 Beta-ketoacyl synthase, C-terminal domain BF31_3396 PF00296 Luciferase-like monooxygenase BF31_3397 PF00107 Zinc-binding dehydrogenase BF31_3397 PF08240 Alcohol dehydrogenase GroES-like domain BF31_3398 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BF31_3398 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BF31_3399 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BF31_3399 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BF31_3400 PF02779 Transketolase, pyrimidine binding domain BF31_3400 PF00456 Transketolase, thiamine diphosphate binding domain BF31_3400 PF02780 Transketolase, C-terminal domain BF31_3401 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BF31_3401 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BF31_3402 PF00923 Transaldolase/Fructose-6-phosphate aldolase BF31_3403 PF02447 GntP family permease BF31_3404 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BF31_3404 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BF31_3405 PF10282 Lactonase, 7-bladed beta-propeller BF31_3406 PF06906 Protein of unknown function (DUF1272) BF31_3407 PF00805 Pentapeptide repeats (8 copies) BF31_3408 PF00892 EamA-like transporter family BF31_3409 PF13411 MerR HTH family regulatory protein BF31_3410 PF03471 Transporter associated domain BF31_3410 PF00571 CBS domain BF31_3410 PF01595 Cyclin M transmembrane N-terminal domain BF31_3412 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF31_3416 PF07690 Major Facilitator Superfamily BF31_3418 PF08241 Methyltransferase domain BF31_342 PF01047 MarR family BF31_3422 PF01594 AI-2E family transporter BF31_3423 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BF31_3423 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BF31_3423 PF13288 DXP reductoisomerase C-terminal domain BF31_3424 PF00579 tRNA synthetases class I (W and Y) BF31_3426 PF00005 ABC transporter BF31_3428 PF14602 Hexapeptide repeat of succinyl-transferase BF31_3428 PF12464 Maltose acetyltransferase BF31_3429 PF07690 Major Facilitator Superfamily BF31_343 PF07690 Major Facilitator Superfamily BF31_3430 PF00480 ROK family BF31_3431 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF31_3433 PF00293 NUDIX domain BF31_3433 PF13344 Haloacid dehalogenase-like hydrolase BF31_3438 PF13419 Haloacid dehalogenase-like hydrolase BF31_344 PF02702 Osmosensitive K+ channel His kinase sensor domain BF31_3443 PF00005 ABC transporter BF31_3447 PF00224 Pyruvate kinase, barrel domain BF31_3447 PF02887 Pyruvate kinase, alpha/beta domain BF31_3447 PF00391 PEP-utilising enzyme, mobile domain BF31_3449 PF00881 Nitroreductase family BF31_345 PF02669 K+-transporting ATPase, c chain BF31_3450 PF01638 HxlR-like helix-turn-helix BF31_3453 PF13393 Histidyl-tRNA synthetase BF31_3453 PF03129 Anticodon binding domain BF31_3454 PF04073 Aminoacyl-tRNA editing domain BF31_3455 PF02660 Glycerol-3-phosphate acyltransferase BF31_3456 PF01381 Helix-turn-helix BF31_3459 PF04231 Endonuclease I BF31_3460 PF03606 C4-dicarboxylate anaerobic carrier BF31_3461 PF03737 Aldolase/RraA BF31_3464 PF02361 Cobalt transport protein BF31_3465 PF00005 ABC transporter BF31_3467 PF14256 YwiC-like protein BF31_347 PF03814 Potassium-transporting ATPase A subunit BF31_3471 PF02525 Flavodoxin-like fold BF31_3473 PF02667 Short chain fatty acid transporter BF31_3474 PF01289 Thiol-activated cytolysin BF31_3474 PF17440 Thiol-activated cytolysin beta sandwich domain BF31_3475 PF00440 Bacterial regulatory proteins, tetR family BF31_3476 PF00893 Small Multidrug Resistance protein BF31_3477 PF17314 Family of unknown function (DUF5360) BF31_3479 PF13396 Phospholipase_D-nuclease N-terminal BF31_3480 PF13732 Domain of unknown function (DUF4162) BF31_3480 PF00005 ABC transporter BF31_3481 PF12679 ABC-2 family transporter protein BF31_3484 PF07690 Major Facilitator Superfamily BF31_3485 PF01047 MarR family BF31_3486 PF12697 Alpha/beta hydrolase family BF31_3487 PF07690 Major Facilitator Superfamily BF31_3488 PF14044 NETI protein BF31_3495 PF00395 S-layer homology domain BF31_3497 PF01804 Penicillin amidase BF31_3498 PF01497 Periplasmic binding protein BF31_3498 PF12833 Helix-turn-helix domain BF31_3499 PF07883 Cupin domain BF31_35 PF03965 Penicillinase repressor BF31_3502 PF08281 Sigma-70, region 4 BF31_3502 PF04542 Sigma-70 region 2 BF31_3505 PF00266 Aminotransferase class-V BF31_3506 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BF31_3506 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BF31_3506 PF01842 ACT domain BF31_3509 PF13520 Amino acid permease BF31_351 PF08543 Phosphomethylpyrimidine kinase BF31_3510 PF01037 Lrp/AsnC ligand binding domain BF31_3511 PF00857 Isochorismatase family BF31_3512 PF00586 AIR synthase related protein, N-terminal domain BF31_3512 PF02769 AIR synthase related protein, C-terminal domain BF31_3513 PF01300 Telomere recombination BF31_3513 PF17788 HypF Kae1-like domain BF31_3513 PF00708 Acylphosphatase BF31_3513 PF07503 HypF finger BF31_3514 PF00202 Aminotransferase class-III BF31_3515 PF03315 Serine dehydratase beta chain BF31_3515 PF01842 ACT domain BF31_3516 PF03313 Serine dehydratase alpha chain BF31_3518 PF01022 Bacterial regulatory protein, arsR family BF31_352 PF00899 ThiF family BF31_3520 PF16859 Tetracyclin repressor-like, C-terminal domain BF31_3520 PF00440 Bacterial regulatory proteins, tetR family BF31_3521 PF07690 Major Facilitator Superfamily BF31_3522 PF02661 Fic/DOC family BF31_3523 PF01609 Transposase DDE domain BF31_3524 PF08453 Peptidase family M9 N-terminal BF31_3524 PF18496 Collagenase G catalytic helper subdomain BF31_3524 PF01752 Collagenase BF31_3525 PF01554 MatE BF31_3529 PF02743 Cache domain BF31_3529 PF00672 HAMP domain BF31_3529 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF31_353 PF05690 Thiazole biosynthesis protein ThiG BF31_3530 PF02743 Cache domain BF31_3530 PF00672 HAMP domain BF31_3530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF31_3533 PF00817 impB/mucB/samB family BF31_3533 PF11799 impB/mucB/samB family C-terminal domain BF31_3533 PF11798 IMS family HHH motif BF31_3537 PF18801 response regulator aspartate phosphatase H, N terminal BF31_3538 PF00356 Bacterial regulatory proteins, lacI family BF31_3539 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BF31_354 PF02597 ThiS family BF31_3540 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BF31_3541 PF05116 Sucrose-6F-phosphate phosphohydrolase BF31_3542 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BF31_3542 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BF31_3543 PF07690 Major Facilitator Superfamily BF31_3547 PF17676 LD-carboxypeptidase C-terminal domain BF31_3547 PF02016 LD-carboxypeptidase N-terminal domain BF31_3549 PF03466 LysR substrate binding domain BF31_3549 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF31_355 PF01266 FAD dependent oxidoreductase BF31_3550 PF02754 Cysteine-rich domain BF31_3551 PF11870 Domain of unknown function (DUF3390) BF31_3551 PF02589 LUD domain BF31_3551 PF13183 4Fe-4S dicluster domain BF31_3552 PF02589 LUD domain BF31_3553 PF07690 Major Facilitator Superfamily BF31_3554 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF31_3554 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF31_3555 PF04299 Putative FMN-binding domain BF31_3556 PF00583 Acetyltransferase (GNAT) family BF31_3557 PF01047 MarR family BF31_3559 PF00486 Transcriptional regulatory protein, C terminal BF31_3559 PF00072 Response regulator receiver domain BF31_356 PF02581 Thiamine monophosphate synthase BF31_3560 PF00672 HAMP domain BF31_3560 PF00512 His Kinase A (phospho-acceptor) domain BF31_3560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_3563 PF02687 FtsX-like permease family BF31_3564 PF00005 ABC transporter BF31_3567 PF04072 Leucine carboxyl methyltransferase BF31_3568 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BF31_3568 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BF31_357 PF09084 NMT1/THI5 like BF31_3570 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family BF31_3571 PF00753 Metallo-beta-lactamase superfamily BF31_3574 PF01381 Helix-turn-helix BF31_3576 PF00144 Beta-lactamase BF31_358 PF00528 Binding-protein-dependent transport system inner membrane component BF31_3580 PF00291 Pyridoxal-phosphate dependent enzyme BF31_3585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_3585 PF00512 His Kinase A (phospho-acceptor) domain BF31_3585 PF00672 HAMP domain BF31_3586 PF00486 Transcriptional regulatory protein, C terminal BF31_3586 PF00072 Response regulator receiver domain BF31_359 PF00005 ABC transporter BF31_3591 PF07690 Major Facilitator Superfamily BF31_3592 PF00258 Flavodoxin BF31_3592 PF00067 Cytochrome P450 BF31_3592 PF00667 FAD binding domain BF31_3592 PF00175 Oxidoreductase NAD-binding domain BF31_3593 PF12802 MarR family BF31_3596 PF00144 Beta-lactamase BF31_360 PF03070 TENA/THI-4/PQQC family BF31_3601 PF01609 Transposase DDE domain BF31_3603 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF31_3606 PF01037 Lrp/AsnC ligand binding domain BF31_3609 PF00012 Hsp70 protein BF31_361 PF00246 Zinc carboxypeptidase BF31_361 PF08239 Bacterial SH3 domain BF31_3613 PF01022 Bacterial regulatory protein, arsR family BF31_3614 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF31_3615 PF01758 Sodium Bile acid symporter family BF31_3616 PF01451 Low molecular weight phosphotyrosine protein phosphatase BF31_3621 PF00005 ABC transporter BF31_3622 PF00950 ABC 3 transport family BF31_3623 PF01297 Zinc-uptake complex component A periplasmic BF31_3624 PF00561 alpha/beta hydrolase fold BF31_3625 PF01040 UbiA prenyltransferase family BF31_3627 PF10057 Uncharacterized conserved protein (DUF2294) BF31_3628 PF00361 Proton-conducting membrane transporter BF31_3628 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BF31_3629 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) BF31_3631 PF03441 FAD binding domain of DNA photolyase BF31_3631 PF00875 DNA photolyase BF31_3632 PF03073 TspO/MBR family BF31_3635 PF11181 Heat induced stress protein YflT BF31_3638 PF01544 CorA-like Mg2+ transporter protein BF31_3639 PF01544 CorA-like Mg2+ transporter protein BF31_364 PF00571 CBS domain BF31_3640 PF01047 MarR family BF31_3641 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF31_3641 PF03466 LysR substrate binding domain BF31_3643 PF01979 Amidohydrolase family BF31_3646 PF00857 Isochorismatase family BF31_3647 PF00561 alpha/beta hydrolase fold BF31_3648 PF06628 Catalase-related immune-responsive BF31_3648 PF00199 Catalase BF31_3649 PF02872 5'-nucleotidase, C-terminal domain BF31_3649 PF17936 Bacterial Ig domain BF31_3649 PF00149 Calcineurin-like phosphoesterase BF31_3655 PF01235 Sodium:alanine symporter family BF31_3657 PF04960 Glutaminase BF31_3658 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_3659 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_3660 PF00072 Response regulator receiver domain BF31_3660 PF08664 YcbB domain BF31_3661 PF03323 Bacillus/Clostridium GerA spore germination protein BF31_3662 PF03845 Spore germination protein BF31_3663 PF05504 Spore germination B3/ GerAC like, C-terminal BF31_3664 PF05504 Spore germination B3/ GerAC like, C-terminal BF31_3666 PF03949 Malic enzyme, NAD binding domain BF31_3666 PF00390 Malic enzyme, N-terminal domain BF31_3667 PF13564 DoxX-like family BF31_3668 PF14748 Pyrroline-5-carboxylate reductase dimerisation BF31_3668 PF03807 NADP oxidoreductase coenzyme F420-dependent BF31_3669 PF05525 Branched-chain amino acid transport protein BF31_3670 PF13520 Amino acid permease BF31_3671 PF08459 UvrC Helix-hairpin-helix N-terminal BF31_3671 PF02151 UvrB/uvrC motif BF31_3671 PF12826 Helix-hairpin-helix motif BF31_3671 PF01541 GIY-YIG catalytic domain BF31_3673 PF01381 Helix-turn-helix BF31_3674 PF00710 Asparaginase, N-terminal BF31_3674 PF17763 Glutaminase/Asparaginase C-terminal domain BF31_3675 PF10415 Fumarase C C-terminus BF31_3675 PF00206 Lyase BF31_3678 PF13823 Alcohol dehydrogenase GroES-associated BF31_3678 PF00107 Zinc-binding dehydrogenase BF31_3678 PF08240 Alcohol dehydrogenase GroES-like domain BF31_3679 PF00269 Small, acid-soluble spore proteins, alpha/beta type BF31_3680 PF11553 Protein of unknown function (DUF3231) BF31_3681 PF10710 Protein of unknown function (DUF2512) BF31_3682 PF00269 Small, acid-soluble spore proteins, alpha/beta type BF31_3684 PF00324 Amino acid permease BF31_3685 PF00324 Amino acid permease BF31_3686 PF01810 LysE type translocator BF31_3687 PF08892 YqcI/YcgG family BF31_3689 PF07875 Coat F domain BF31_3692 PF00753 Metallo-beta-lactamase superfamily BF31_3693 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BF31_3693 PF00391 PEP-utilising enzyme, mobile domain BF31_3694 PF00440 Bacterial regulatory proteins, tetR family BF31_3696 PF02915 Rubrerythrin BF31_3703 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BF31_3703 PF02770 Acyl-CoA dehydrogenase, middle domain BF31_3703 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BF31_3706 PF07454 Stage II sporulation protein P (SpoIIP) BF31_3707 PF03932 CutC family BF31_3708 PF10502 Signal peptidase, peptidase S26 BF31_3709 PF01614 Bacterial transcriptional regulator BF31_3709 PF09339 IclR helix-turn-helix domain BF31_3710 PF02682 Carboxyltransferase domain, subdomain C and D BF31_3711 PF02626 Carboxyltransferase domain, subdomain A and B BF31_3712 PF03746 LamB/YcsF family BF31_3716 PF01470 Pyroglutamyl peptidase BF31_3717 PF02146 Sir2 family BF31_3720 PF10502 Signal peptidase, peptidase S26 BF31_3722 PF00293 NUDIX domain BF31_3726 PF10898 Protein of unknown function (DUF2716) BF31_3727 PF08713 DNA alkylation repair enzyme BF31_3729 PF00324 Amino acid permease BF31_3730 PF13302 Acetyltransferase (GNAT) domain BF31_3731 PF01925 Sulfite exporter TauE/SafE BF31_3737 PF00561 alpha/beta hydrolase fold BF31_3738 PF00486 Transcriptional regulatory protein, C terminal BF31_3738 PF00072 Response regulator receiver domain BF31_3739 PF00672 HAMP domain BF31_3739 PF00512 His Kinase A (phospho-acceptor) domain BF31_3741 PF13031 Protein of unknown function (DUF3892) BF31_3742 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BF31_3743 PF00155 Aminotransferase class I and II BF31_3743 PF00392 Bacterial regulatory proteins, gntR family BF31_3744 PF00892 EamA-like transporter family BF31_3747 PF00583 Acetyltransferase (GNAT) family BF31_3748 PF12833 Helix-turn-helix domain BF31_3753 PF02687 FtsX-like permease family BF31_3753 PF12704 MacB-like periplasmic core domain BF31_3753 PF00005 ABC transporter BF31_3755 PF00392 Bacterial regulatory proteins, gntR family BF31_3756 PF00005 ABC transporter BF31_3759 PF00293 NUDIX domain BF31_3761 PF00009 Elongation factor Tu GTP binding domain BF31_3761 PF00679 Elongation factor G C-terminus BF31_3761 PF14492 Elongation Factor G, domain II BF31_3761 PF03764 Elongation factor G, domain IV BF31_3762 PF01047 MarR family BF31_3763 PF00881 Nitroreductase family BF31_3765 PF07726 ATPase family associated with various cellular activities (AAA) BF31_3765 PF17863 AAA lid domain BF31_3770 PF00144 Beta-lactamase BF31_3771 PF01979 Amidohydrolase family BF31_3771 PF13382 Adenine deaminase C-terminal domain BF31_3773 PF06628 Catalase-related immune-responsive BF31_3773 PF00199 Catalase BF31_3777 PF00535 Glycosyl transferase family 2 BF31_3779 PF00535 Glycosyl transferase family 2 BF31_3782 PF00535 Glycosyl transferase family 2 BF31_3784 PF07690 Major Facilitator Superfamily BF31_3787 PF17863 AAA lid domain BF31_3787 PF07726 ATPase family associated with various cellular activities (AAA) BF31_3791 PF12681 Glyoxalase-like domain BF31_3792 PF13302 Acetyltransferase (GNAT) domain BF31_3794 PF00072 Response regulator receiver domain BF31_3794 PF04397 LytTr DNA-binding domain BF31_3796 PF10086 YhfC intramembrane metalloprotease BF31_3799 PF13443 Cro/C1-type HTH DNA-binding domain BF31_3800 PF11188 Protein of unknown function (DUF2975) BF31_3801 PF00245 Alkaline phosphatase BF31_3802 PF00487 Fatty acid desaturase BF31_3803 PF01139 tRNA-splicing ligase RtcB BF31_3804 PF00324 Amino acid permease BF31_3805 PF09339 IclR helix-turn-helix domain BF31_3805 PF01614 Bacterial transcriptional regulator BF31_3806 PF01546 Peptidase family M20/M25/M40 BF31_3807 PF14748 Pyrroline-5-carboxylate reductase dimerisation BF31_3807 PF03807 NADP oxidoreductase coenzyme F420-dependent BF31_3808 PF00696 Amino acid kinase family BF31_3808 PF01472 PUA domain BF31_3809 PF00171 Aldehyde dehydrogenase family BF31_3810 PF01773 Na+ dependent nucleoside transporter N-terminus BF31_3810 PF07662 Na+ dependent nucleoside transporter C-terminus BF31_3814 PF03992 Antibiotic biosynthesis monooxygenase BF31_3818 PF01791 DeoC/LacD family aldolase BF31_3820 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BF31_3820 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BF31_3821 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BF31_3821 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BF31_3822 PF00325 Bacterial regulatory proteins, crp family BF31_3822 PF04198 Putative sugar-binding domain BF31_3823 PF00005 ABC transporter BF31_3824 PF02653 Branched-chain amino acid transport system / permease component BF31_3825 PF02653 Branched-chain amino acid transport system / permease component BF31_3826 PF13407 Periplasmic binding protein domain BF31_3827 PF06039 Malate:quinone oxidoreductase (Mqo) BF31_3832 PF04542 Sigma-70 region 2 BF31_3832 PF08281 Sigma-70, region 4 BF31_3834 PF06725 3D domain BF31_3834 PF01476 LysM domain BF31_3837 PF01636 Phosphotransferase enzyme family BF31_3842 PF01817 Chorismate mutase type II BF31_3842 PF00793 DAHP synthetase I family BF31_3843 PF01264 Chorismate synthase BF31_3844 PF00155 Aminotransferase class I and II BF31_3845 PF02153 Prephenate dehydrogenase BF31_3845 PF01842 ACT domain BF31_3846 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BF31_3848 PF00440 Bacterial regulatory proteins, tetR family BF31_3848 PF16295 Tetracyclin repressor-like, C-terminal domain BF31_3849 PF03176 MMPL family BF31_3850 PF03176 MMPL family BF31_3852 PF12848 ABC transporter BF31_3852 PF00005 ABC transporter BF31_3853 PF00884 Sulfatase BF31_3854 PF03741 Integral membrane protein TerC family BF31_3856 PF01522 Polysaccharide deacetylase BF31_3858 PF08713 DNA alkylation repair enzyme BF31_3862 PF12867 DinB superfamily BF31_3863 PF13536 Putative multidrug resistance efflux transporter BF31_3868 PF02522 Aminoglycoside 3-N-acetyltransferase BF31_3876 PF00005 ABC transporter BF31_3877 PF09084 NMT1/THI5 like BF31_3878 PF00528 Binding-protein-dependent transport system inner membrane component BF31_3879 PF00296 Luciferase-like monooxygenase BF31_3881 PF01594 AI-2E family transporter BF31_389 PF00873 AcrB/AcrD/AcrF family BF31_3890 PF00005 ABC transporter BF31_3894 PF03630 Fumble BF31_3895 PF07977 FabA-like domain BF31_3896 PF00155 Aminotransferase class I and II BF31_3903 PF08241 Methyltransferase domain BF31_3905 PF01156 Inosine-uridine preferring nucleoside hydrolase BF31_3906 PF04226 Transglycosylase associated protein BF31_391 PF00528 Binding-protein-dependent transport system inner membrane component BF31_3910 PF07690 Major Facilitator Superfamily BF31_3911 PF12793 Sugar transport-related sRNA regulator N-term BF31_3911 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF31_3912 PF13171 Protein of unknown function (DUF4004) BF31_3913 PF04519 Polymer-forming cytoskeletal BF31_3916 PF07690 Major Facilitator Superfamily BF31_3919 PF02645 Uncharacterised protein, DegV family COG1307 BF31_392 PF00528 Binding-protein-dependent transport system inner membrane component BF31_3922 PF01432 Peptidase family M3 BF31_3922 PF08439 Oligopeptidase F BF31_3923 PF03808 Glycosyl transferase WecB/TagA/CpsF family BF31_3925 PF01048 Phosphorylase superfamily BF31_3929 PF00072 Response regulator receiver domain BF31_3929 PF00486 Transcriptional regulatory protein, C terminal BF31_393 PF12849 PBP superfamily domain BF31_3930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_3930 PF16736 Single Cache-like BF31_3930 PF00512 His Kinase A (phospho-acceptor) domain BF31_3930 PF00989 PAS fold BF31_3931 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BF31_3931 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BF31_3936 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BF31_3939 PF13378 Enolase C-terminal domain-like BF31_3939 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BF31_394 PF04023 FeoA domain BF31_394 PF17910 FeoB cytosolic helical domain BF31_394 PF02421 Ferrous iron transport protein B BF31_394 PF07670 Nucleoside recognition BF31_394 PF07664 Ferrous iron transport protein B C terminus BF31_3940 PF00877 NlpC/P60 family BF31_3940 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain BF31_3941 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF31_3942 PF13673 Acetyltransferase (GNAT) domain BF31_3942 PF13302 Acetyltransferase (GNAT) domain BF31_3942 PF00117 Glutamine amidotransferase class-I BF31_3942 PF00958 GMP synthase C terminal domain BF31_3942 PF03352 Methyladenine glycosylase BF31_3943 PF04914 DltD protein BF31_3946 PF09335 SNARE associated Golgi protein BF31_3947 PF08876 Domain of unknown function (DUF1836) BF31_395 PF07664 Ferrous iron transport protein B C terminus BF31_395 PF17910 FeoB cytosolic helical domain BF31_395 PF02421 Ferrous iron transport protein B BF31_395 PF07670 Nucleoside recognition BF31_3950 PF04324 BFD-like [2Fe-2S] binding domain BF31_3950 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF31_3952 PF00158 Sigma-54 interaction domain BF31_3952 PF13188 PAS domain BF31_3952 PF02954 Bacterial regulatory protein, Fis family BF31_3953 PF01266 FAD dependent oxidoreductase BF31_3954 PF05544 Proline racemase BF31_3955 PF05544 Proline racemase BF31_3956 PF00701 Dihydrodipicolinate synthetase family BF31_3957 PF00171 Aldehyde dehydrogenase family BF31_3958 PF01235 Sodium:alanine symporter family BF31_3959 PF02627 Carboxymuconolactone decarboxylase family BF31_396 PF07670 Nucleoside recognition BF31_396 PF02421 Ferrous iron transport protein B BF31_396 PF17910 FeoB cytosolic helical domain BF31_396 PF07664 Ferrous iron transport protein B C terminus BF31_3961 PF18416 N-acetylglucosamine binding protein domain 2 BF31_3961 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading BF31_3962 PF01368 DHH family BF31_3962 PF02833 DHHA2 domain BF31_397 PF05504 Spore germination B3/ GerAC like, C-terminal BF31_3970 PF09382 RQC domain BF31_3970 PF16124 RecQ zinc-binding BF31_3970 PF00570 HRDC domain BF31_3970 PF00271 Helicase conserved C-terminal domain BF31_3970 PF00270 DEAD/DEAH box helicase BF31_3971 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like BF31_3974 PF13538 UvrD-like helicase C-terminal domain BF31_398 PF03845 Spore germination protein BF31_3984 PF03772 Competence protein BF31_3984 PF13567 Domain of unknown function (DUF4131) BF31_3984 PF00753 Metallo-beta-lactamase superfamily BF31_3989 PF10990 Protein of unknown function (DUF2809) BF31_399 PF03323 Bacillus/Clostridium GerA spore germination protein BF31_3993 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading BF31_3993 PF18416 N-acetylglucosamine binding protein domain 2 BF31_3994 PF13673 Acetyltransferase (GNAT) domain BF31_3995 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BF31_3998 PF00574 Clp protease BF31_3999 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BF31_400 PF00474 Sodium:solute symporter family BF31_4000 PF00571 CBS domain BF31_4000 PF00005 ABC transporter BF31_4001 PF00528 Binding-protein-dependent transport system inner membrane component BF31_4007 PF13673 Acetyltransferase (GNAT) domain BF31_4007 PF04229 GrpB protein BF31_4008 PF00106 short chain dehydrogenase BF31_401 PF11755 Protein of unknown function (DUF3311) BF31_4010 PF00676 Dehydrogenase E1 component BF31_4011 PF02780 Transketolase, C-terminal domain BF31_4011 PF02779 Transketolase, pyrimidine binding domain BF31_4012 PF00364 Biotin-requiring enzyme BF31_4012 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BF31_4012 PF02817 e3 binding domain BF31_4013 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BF31_4013 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF31_4017 PF02082 Transcriptional regulator BF31_4018 PF00403 Heavy-metal-associated domain BF31_4018 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BF31_4018 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF31_402 PF07687 Peptidase dimerisation domain BF31_402 PF01546 Peptidase family M20/M25/M40 BF31_4021 PF00455 DeoR C terminal sensor domain BF31_4021 PF08220 DeoR-like helix-turn-helix domain BF31_4022 PF13302 Acetyltransferase (GNAT) domain BF31_4025 PF01590 GAF domain BF31_4025 PF02954 Bacterial regulatory protein, Fis family BF31_4025 PF00158 Sigma-54 interaction domain BF31_403 PF13529 Peptidase_C39 like family BF31_4030 PF13344 Haloacid dehalogenase-like hydrolase BF31_4030 PF00293 NUDIX domain BF31_4031 PF08359 YsiA-like protein, C-terminal region BF31_4031 PF00440 Bacterial regulatory proteins, tetR family BF31_4032 PF00266 Aminotransferase class-V BF31_4033 PF04199 Putative cyclase BF31_4034 PF03301 Tryptophan 2,3-dioxygenase BF31_4037 PF01471 Putative peptidoglycan binding domain BF31_4037 PF07486 Cell Wall Hydrolase BF31_4038 PF03413 Peptidase propeptide and YPEB domain BF31_4038 PF14620 YpeB sporulation BF31_4039 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BF31_404 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BF31_4042 PF06081 Aromatic acid exporter family member 1 BF31_4047 PF00561 alpha/beta hydrolase fold BF31_4048 PF00155 Aminotransferase class I and II BF31_4048 PF00392 Bacterial regulatory proteins, gntR family BF31_4049 PF00892 EamA-like transporter family BF31_405 PF00115 Cytochrome C and Quinol oxidase polypeptide I BF31_4050 PF08299 Bacterial dnaA protein helix-turn-helix BF31_4050 PF00308 Bacterial dnaA protein BF31_4050 PF11638 DnaA N-terminal domain BF31_4051 PF00344 SecY translocase BF31_4055 PF02868 Thermolysin metallopeptidase, alpha-helical domain BF31_4055 PF03413 Peptidase propeptide and YPEB domain BF31_4055 PF07504 Fungalysin/Thermolysin Propeptide Motif BF31_4055 PF01447 Thermolysin metallopeptidase, catalytic domain BF31_4056 PF00128 Alpha amylase, catalytic domain BF31_4056 PF03714 Bacterial pullanase-associated domain BF31_4056 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BF31_4058 PF13193 AMP-binding enzyme C-terminal domain BF31_4058 PF00501 AMP-binding enzyme BF31_4058 PF00550 Phosphopantetheine attachment site BF31_4058 PF00668 Condensation domain BF31_4059 PF00282 Pyridoxal-dependent decarboxylase conserved domain BF31_406 PF00510 Cytochrome c oxidase subunit III BF31_4061 PF07859 alpha/beta hydrolase fold BF31_4064 PF13419 Haloacid dehalogenase-like hydrolase BF31_4069 PF01266 FAD dependent oxidoreductase BF31_4077 PF01541 GIY-YIG catalytic domain BF31_4079 PF02673 Bacitracin resistance protein BacA BF31_408 PF00999 Sodium/hydrogen exchanger family BF31_408 PF02080 TrkA-C domain BF31_408 PF02254 TrkA-N domain BF31_4083 PF12867 DinB superfamily BF31_4085 PF08000 Bacterial PH domain BF31_4086 PF01734 Patatin-like phospholipase BF31_4092 PF09234 Domain of unknown function (DUF1963) BF31_4096 PF12706 Beta-lactamase superfamily domain BF31_4099 PF00293 NUDIX domain BF31_4100 PF00712 DNA polymerase III beta subunit, N-terminal domain BF31_4100 PF02768 DNA polymerase III beta subunit, C-terminal domain BF31_4100 PF02767 DNA polymerase III beta subunit, central domain BF31_4101 PF00293 NUDIX domain BF31_4101 PF09297 NADH pyrophosphatase zinc ribbon domain BF31_4103 PF07690 Major Facilitator Superfamily BF31_4107 PF00293 NUDIX domain BF31_4109 PF01270 Glycosyl hydrolases family 8 BF31_4110 PF00892 EamA-like transporter family BF31_4111 PF00392 Bacterial regulatory proteins, gntR family BF31_4111 PF00155 Aminotransferase class I and II BF31_4112 PF00392 Bacterial regulatory proteins, gntR family BF31_4112 PF00155 Aminotransferase class I and II BF31_4115 PF03009 Glycerophosphoryl diester phosphodiesterase family BF31_4119 PF07690 Major Facilitator Superfamily BF31_4121 PF00144 Beta-lactamase BF31_4124 PF01965 DJ-1/PfpI family BF31_413 PF00860 Permease family BF31_4130 PF11954 Domain of unknown function (DUF3471) BF31_4130 PF00144 Beta-lactamase BF31_4133 PF00107 Zinc-binding dehydrogenase BF31_4133 PF08240 Alcohol dehydrogenase GroES-like domain BF31_4136 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_4136 PF00512 His Kinase A (phospho-acceptor) domain BF31_4139 PF12558 ATP-binding cassette cobalt transporter BF31_4139 PF00005 ABC transporter BF31_414 PF00324 Amino acid permease BF31_4140 PF07155 ECF-type riboflavin transporter, S component BF31_4141 PF01177 Asp/Glu/Hydantoin racemase BF31_4142 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BF31_4144 PF00989 PAS fold BF31_4144 PF00512 His Kinase A (phospho-acceptor) domain BF31_4144 PF13188 PAS domain BF31_4144 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_4144 PF13426 PAS domain BF31_4148 PF00067 Cytochrome P450 BF31_4150 PF07561 Domain of Unknown Function (DUF1540) BF31_4151 PF00132 Bacterial transferase hexapeptide (six repeats) BF31_4153 PF00067 Cytochrome P450 BF31_4169 PF03070 TENA/THI-4/PQQC family BF31_417 PF05525 Branched-chain amino acid transport protein BF31_4170 PF07478 D-ala D-ala ligase C-terminus BF31_4170 PF01820 D-ala D-ala ligase N-terminus BF31_4171 PF00155 Aminotransferase class I and II BF31_4171 PF00392 Bacterial regulatory proteins, gntR family BF31_4172 PF01842 ACT domain BF31_4172 PF00742 Homoserine dehydrogenase BF31_4172 PF03447 Homoserine dehydrogenase, NAD binding domain BF31_4176 PF02687 FtsX-like permease family BF31_4177 PF02687 FtsX-like permease family BF31_4178 PF00005 ABC transporter BF31_418 PF00854 POT family BF31_4183 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_4185 PF00072 Response regulator receiver domain BF31_4185 PF00486 Transcriptional regulatory protein, C terminal BF31_4187 PF07486 Cell Wall Hydrolase BF31_419 PF04203 Sortase domain BF31_4190 PF01225 Mur ligase family, catalytic domain BF31_4190 PF08245 Mur ligase middle domain BF31_4190 PF02875 Mur ligase family, glutamate ligase domain BF31_4191 PF01225 Mur ligase family, catalytic domain BF31_4191 PF02875 Mur ligase family, glutamate ligase domain BF31_4191 PF08245 Mur ligase middle domain BF31_4194 PF00107 Zinc-binding dehydrogenase BF31_4194 PF08240 Alcohol dehydrogenase GroES-like domain BF31_4196 PF00392 Bacterial regulatory proteins, gntR family BF31_4196 PF00155 Aminotransferase class I and II BF31_4199 PF12833 Helix-turn-helix domain BF31_42 PF01208 Uroporphyrinogen decarboxylase (URO-D) BF31_4200 PF01636 Phosphotransferase enzyme family BF31_4204 PF07690 Major Facilitator Superfamily BF31_4205 PF00376 MerR family regulatory protein BF31_4205 PF09278 MerR, DNA binding BF31_4206 PF00144 Beta-lactamase BF31_4209 PF17755 UvrA DNA-binding domain BF31_4209 PF17760 UvrA interaction domain BF31_4209 PF17755 UvrA DNA-binding domain BF31_4209 PF17760 UvrA interaction domain BF31_421 PF01381 Helix-turn-helix BF31_4213 PF07504 Fungalysin/Thermolysin Propeptide Motif BF31_4213 PF03413 Peptidase propeptide and YPEB domain BF31_4213 PF02868 Thermolysin metallopeptidase, alpha-helical domain BF31_4213 PF01447 Thermolysin metallopeptidase, catalytic domain BF31_4214 PF02868 Thermolysin metallopeptidase, alpha-helical domain BF31_4214 PF01447 Thermolysin metallopeptidase, catalytic domain BF31_4214 PF03413 Peptidase propeptide and YPEB domain BF31_4214 PF07504 Fungalysin/Thermolysin Propeptide Motif BF31_4218 PF01048 Phosphorylase superfamily BF31_4219 PF13021 Domain of unknown function (DUF3885) BF31_422 PF06725 3D domain BF31_422 PF01476 LysM domain BF31_4220 PF01966 HD domain BF31_4221 PF00072 Response regulator receiver domain BF31_4221 PF00486 Transcriptional regulatory protein, C terminal BF31_4222 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_4222 PF00512 His Kinase A (phospho-acceptor) domain BF31_4223 PF07943 Penicillin-binding protein 5, C-terminal domain BF31_4223 PF00768 D-alanyl-D-alanine carboxypeptidase BF31_4224 PF05163 DinB family BF31_4226 PF00485 Phosphoribulokinase / Uridine kinase family BF31_4227 PF00583 Acetyltransferase (GNAT) family BF31_4229 PF00501 AMP-binding enzyme BF31_4229 PF13193 AMP-binding enzyme C-terminal domain BF31_4229 PF16177 Acetyl-coenzyme A synthetase N-terminus BF31_423 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF31_423 PF02743 Cache domain BF31_423 PF00672 HAMP domain BF31_4230 PF01039 Carboxyl transferase domain BF31_4231 PF00378 Enoyl-CoA hydratase/isomerase BF31_4232 PF00682 HMGL-like BF31_4233 PF00364 Biotin-requiring enzyme BF31_4234 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BF31_4234 PF00289 Biotin carboxylase, N-terminal domain BF31_4234 PF02785 Biotin carboxylase C-terminal domain BF31_4235 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BF31_4235 PF02770 Acyl-CoA dehydrogenase, middle domain BF31_4235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BF31_4238 PF08359 YsiA-like protein, C-terminal region BF31_4238 PF00440 Bacterial regulatory proteins, tetR family BF31_424 PF02673 Bacitracin resistance protein BacA BF31_4240 PF00005 ABC transporter BF31_4243 PF00581 Rhodanese-like domain BF31_4244 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF31_4246 PF13302 Acetyltransferase (GNAT) domain BF31_4247 PF03707 Bacterial signalling protein N terminal repeat BF31_4247 PF00990 Diguanylate cyclase, GGDEF domain BF31_4247 PF00563 EAL domain BF31_4250 PF00440 Bacterial regulatory proteins, tetR family BF31_4253 PF00395 S-layer homology domain BF31_4253 PF01520 N-acetylmuramoyl-L-alanine amidase BF31_4255 PF02557 D-alanyl-D-alanine carboxypeptidase BF31_4258 PF01381 Helix-turn-helix BF31_4259 PF18801 response regulator aspartate phosphatase H, N terminal BF31_4261 PF02872 5'-nucleotidase, C-terminal domain BF31_4261 PF00149 Calcineurin-like phosphoesterase BF31_4262 PF02872 5'-nucleotidase, C-terminal domain BF31_4262 PF00149 Calcineurin-like phosphoesterase BF31_4266 PF04962 KduI/IolB family BF31_4267 PF01116 Fructose-bisphosphate aldolase class-II BF31_4268 PF01261 Xylose isomerase-like TIM barrel BF31_4269 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BF31_4269 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BF31_4269 PF00205 Thiamine pyrophosphate enzyme, central domain BF31_4270 PF00171 Aldehyde dehydrogenase family BF31_4271 PF00294 pfkB family carbohydrate kinase BF31_4272 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BF31_4272 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BF31_4273 PF07690 Major Facilitator Superfamily BF31_4274 PF00356 Bacterial regulatory proteins, lacI family BF31_4275 PF01569 PAP2 superfamily BF31_4279 PF00905 Penicillin binding protein transpeptidase domain BF31_4279 PF03717 Penicillin-binding Protein dimerisation domain BF31_4281 PF04542 Sigma-70 region 2 BF31_4281 PF08281 Sigma-70, region 4 BF31_4285 PF01546 Peptidase family M20/M25/M40 BF31_4285 PF07687 Peptidase dimerisation domain BF31_429 PF03372 Endonuclease/Exonuclease/phosphatase family BF31_4291 PF14171 Toxin SpoIISA, type II toxin-antitoxin system BF31_4292 PF00300 Histidine phosphatase superfamily (branch 1) BF31_4293 PF12802 MarR family BF31_4294 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BF31_4294 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BF31_4294 PF00205 Thiamine pyrophosphate enzyme, central domain BF31_4295 PF08241 Methyltransferase domain BF31_4297 PF03848 Tellurite resistance protein TehB BF31_4297 PF09313 Domain of unknown function (DUF1971) BF31_4298 PF02687 FtsX-like permease family BF31_4298 PF00005 ABC transporter BF31_4298 PF12704 MacB-like periplasmic core domain BF31_43 PF00912 Transglycosylase BF31_43 PF00905 Penicillin binding protein transpeptidase domain BF31_430 PF00882 Zinc dependent phospholipase C BF31_4301 PF00440 Bacterial regulatory proteins, tetR family BF31_4301 PF17932 Tetracyclin repressor-like, C-terminal domain BF31_4303 PF00270 DEAD/DEAH box helicase BF31_4303 PF00271 Helicase conserved C-terminal domain BF31_4306 PF00753 Metallo-beta-lactamase superfamily BF31_4306 PF16123 Hydroxyacylglutathione hydrolase C-terminus BF31_4308 PF00291 Pyridoxal-phosphate dependent enzyme BF31_4309 PF00266 Aminotransferase class-V BF31_4310 PF02660 Glycerol-3-phosphate acyltransferase BF31_4311 PF01869 BadF/BadG/BcrA/BcrD ATPase family BF31_4312 PF03702 Anhydro-N-acetylmuramic acid kinase BF31_4314 PF02378 Phosphotransferase system, EIIC BF31_4316 PF02638 Glycosyl hydrolase-like 10 BF31_432 PF08240 Alcohol dehydrogenase GroES-like domain BF31_432 PF00107 Zinc-binding dehydrogenase BF31_4321 PF08281 Sigma-70, region 4 BF31_4321 PF12680 SnoaL-like domain BF31_4321 PF04542 Sigma-70 region 2 BF31_4322 PF00890 FAD binding domain BF31_4326 PF07883 Cupin domain BF31_4326 PF01381 Helix-turn-helix BF31_4327 PF01810 LysE type translocator BF31_4330 PF00664 ABC transporter transmembrane region BF31_4330 PF00005 ABC transporter BF31_4331 PF00664 ABC transporter transmembrane region BF31_4331 PF00005 ABC transporter BF31_4334 PF03473 MOSC domain BF31_4334 PF03475 3-alpha domain BF31_4335 PF03466 LysR substrate binding domain BF31_4335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF31_4338 PF02774 Semialdehyde dehydrogenase, dimerisation domain BF31_4338 PF01118 Semialdehyde dehydrogenase, NAD binding domain BF31_4339 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF31_4339 PF03466 LysR substrate binding domain BF31_435 PF05547 Immune inhibitor A peptidase M6 BF31_4351 PF00313 'Cold-shock' DNA-binding domain BF31_4353 PF13302 Acetyltransferase (GNAT) domain BF31_436 PF00923 Transaldolase/Fructose-6-phosphate aldolase BF31_4361 PF00583 Acetyltransferase (GNAT) family BF31_4364 PF00302 Chloramphenicol acetyltransferase BF31_4366 PF03176 MMPL family BF31_4368 PF16123 Hydroxyacylglutathione hydrolase C-terminus BF31_4368 PF00753 Metallo-beta-lactamase superfamily BF31_437 PF13407 Periplasmic binding protein domain BF31_4377 PF13649 Methyltransferase domain BF31_438 PF02653 Branched-chain amino acid transport system / permease component BF31_4382 PF07690 Major Facilitator Superfamily BF31_4383 PF12146 Serine aminopeptidase, S33 BF31_4387 PF03129 Anticodon binding domain BF31_4387 PF02824 TGS domain BF31_4387 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BF31_4387 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BF31_4388 PF00849 RNA pseudouridylate synthase BF31_4388 PF01479 S4 domain BF31_4389 PF16291 Domain of unknown function (DUF4937 BF31_439 PF00005 ABC transporter BF31_4392 PF01235 Sodium:alanine symporter family BF31_4393 PF00082 Subtilase family BF31_4394 PF05163 DinB family BF31_4396 PF00216 Bacterial DNA-binding protein BF31_4399 PF07690 Major Facilitator Superfamily BF31_44 PF03992 Antibiotic biosynthesis monooxygenase BF31_440 PF05025 RbsD / FucU transport protein family BF31_4400 PF03621 MbtH-like protein BF31_4401 PF00975 Thioesterase domain BF31_4401 PF00550 Phosphopantetheine attachment site BF31_4401 PF00501 AMP-binding enzyme BF31_4401 PF13193 AMP-binding enzyme C-terminal domain BF31_4401 PF00668 Condensation domain BF31_4402 PF00857 Isochorismatase family BF31_4402 PF00550 Phosphopantetheine attachment site BF31_4403 PF13193 AMP-binding enzyme C-terminal domain BF31_4403 PF00501 AMP-binding enzyme BF31_4404 PF00425 chorismate binding enzyme BF31_4405 PF00106 short chain dehydrogenase BF31_4406 PF07690 Major Facilitator Superfamily BF31_4408 PF01022 Bacterial regulatory protein, arsR family BF31_441 PF00294 pfkB family carbohydrate kinase BF31_4410 PF13476 AAA domain BF31_4411 PF00149 Calcineurin-like phosphoesterase BF31_4411 PF12320 Type 5 capsule protein repressor C-terminal domain BF31_4412 PF10763 Protein of unknown function (DUF2584) BF31_4414 PF00378 Enoyl-CoA hydratase/isomerase BF31_4415 PF01810 LysE type translocator BF31_4416 PF00171 Aldehyde dehydrogenase family BF31_4417 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BF31_4417 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BF31_4418 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BF31_4418 PF02770 Acyl-CoA dehydrogenase, middle domain BF31_4418 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BF31_442 PF00356 Bacterial regulatory proteins, lacI family BF31_4420 PF03972 MmgE/PrpD family BF31_4421 PF00285 Citrate synthase, C-terminal domain BF31_4422 PF01521 Iron-sulphur cluster biosynthesis BF31_4423 PF07690 Major Facilitator Superfamily BF31_4424 PF00912 Transglycosylase BF31_4424 PF00905 Penicillin binding protein transpeptidase domain BF31_4428 PF10676 Spore germination protein gerPA/gerPF BF31_443 PF07690 Major Facilitator Superfamily BF31_444 PF07690 Major Facilitator Superfamily BF31_4448 PF04471 Restriction endonuclease BF31_445 PF01047 MarR family BF31_4450 PF00150 Cellulase (glycosyl hydrolase family 5) BF31_4450 PF00395 S-layer homology domain BF31_4450 PF03424 Carbohydrate binding domain (family 17/28) BF31_4451 PF14436 Bacterial EndoU nuclease BF31_4451 PF04740 LXG domain of WXG superfamily BF31_4453 PF00085 Thioredoxin BF31_4454 PF01569 PAP2 superfamily BF31_4455 PF16916 Dimerisation domain of Zinc Transporter BF31_4455 PF01545 Cation efflux family BF31_4456 PF07070 SpoOM protein BF31_4459 PF14162 YozD-like protein BF31_446 PF07690 Major Facilitator Superfamily BF31_4462 PF06855 YozE SAM-like fold BF31_4463 PF14122 YokU-like protein, putative antitoxin BF31_4464 PF12544 Lysine-2,3-aminomutase BF31_4465 PF00158 Sigma-54 interaction domain BF31_4465 PF13426 PAS domain BF31_4465 PF02954 Bacterial regulatory protein, Fis family BF31_4466 PF00583 Acetyltransferase (GNAT) family BF31_4467 PF07687 Peptidase dimerisation domain BF31_4467 PF01546 Peptidase family M20/M25/M40 BF31_4468 PF01144 Coenzyme A transferase BF31_4469 PF01144 Coenzyme A transferase BF31_447 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF31_447 PF00005 ABC transporter BF31_4470 PF00202 Aminotransferase class-III BF31_4472 PF09385 Histidine kinase N terminal BF31_4473 PF07997 Protein of unknown function (DUF1694) BF31_4474 PF00171 Aldehyde dehydrogenase family BF31_4475 PF03471 Transporter associated domain BF31_4475 PF00571 CBS domain BF31_4475 PF01595 Cyclin M transmembrane N-terminal domain BF31_448 PF00005 ABC transporter BF31_448 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF31_4481 PF13520 Amino acid permease BF31_4482 PF00528 Binding-protein-dependent transport system inner membrane component BF31_4483 PF00571 CBS domain BF31_4483 PF00005 ABC transporter BF31_4486 PF03358 NADPH-dependent FMN reductase BF31_4489 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BF31_4489 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BF31_449 PF00528 Binding-protein-dependent transport system inner membrane component BF31_4490 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BF31_4490 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BF31_4494 PF00144 Beta-lactamase BF31_4497 PF08240 Alcohol dehydrogenase GroES-like domain BF31_4497 PF00107 Zinc-binding dehydrogenase BF31_4498 PF01418 Helix-turn-helix domain, rpiR family BF31_4498 PF01380 SIS domain BF31_45 PF03703 Bacterial PH domain BF31_450 PF00528 Binding-protein-dependent transport system inner membrane component BF31_4500 PF00072 Response regulator receiver domain BF31_4500 PF00196 Bacterial regulatory proteins, luxR family BF31_4501 PF07730 Histidine kinase BF31_4501 PF13185 GAF domain BF31_4502 PF00924 Mechanosensitive ion channel BF31_4503 PF00011 Hsp20/alpha crystallin family BF31_4504 PF00293 NUDIX domain BF31_4505 PF00857 Isochorismatase family BF31_4508 PF00881 Nitroreductase family BF31_4509 PF01063 Amino-transferase class IV BF31_451 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF31_4510 PF01497 Periplasmic binding protein BF31_4514 PF13537 Glutamine amidotransferase domain BF31_4514 PF00733 Asparagine synthase BF31_4515 PF00011 Hsp20/alpha crystallin family BF31_4516 PF02630 SCO1/SenC BF31_4518 PF02645 Uncharacterised protein, DegV family COG1307 BF31_4520 PF00902 Sec-independent protein translocase protein (TatC) BF31_4521 PF02416 mttA/Hcf106 family BF31_4522 PF03006 Haemolysin-III related BF31_4523 PF01553 Acyltransferase BF31_4524 PF02525 Flavodoxin-like fold BF31_4527 PF00186 Dihydrofolate reductase BF31_4528 PF00303 Thymidylate synthase BF31_4529 PF07930 D-aminopeptidase, domain B BF31_4529 PF00144 Beta-lactamase BF31_453 PF00582 Universal stress protein family BF31_4533 PF13419 Haloacid dehalogenase-like hydrolase BF31_4534 PF14005 YpjP-like protein BF31_4535 PF05975 Bacterial ABC transporter protein EcsB BF31_4536 PF00005 ABC transporter BF31_454 PF00916 Sulfate permease family BF31_454 PF01740 STAS domain BF31_4540 PF00583 Acetyltransferase (GNAT) family BF31_4541 PF01980 tRNA-methyltransferase O BF31_4542 PF01177 Asp/Glu/Hydantoin racemase BF31_4543 PF00465 Iron-containing alcohol dehydrogenase BF31_4545 PF13419 Haloacid dehalogenase-like hydrolase BF31_4546 PF10997 Alternate to MurJ BF31_4549 PF00209 Sodium:neurotransmitter symporter family BF31_4552 PF00672 HAMP domain BF31_4552 PF00512 His Kinase A (phospho-acceptor) domain BF31_4552 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_4553 PF00486 Transcriptional regulatory protein, C terminal BF31_4553 PF00072 Response regulator receiver domain BF31_4554 PF00939 Sodium:sulfate symporter transmembrane region BF31_4555 PF02595 Glycerate kinase family BF31_456 PF00072 Response regulator receiver domain BF31_456 PF00486 Transcriptional regulatory protein, C terminal BF31_457 PF00672 HAMP domain BF31_457 PF18698 Histidine kinase sensor domain BF31_457 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_457 PF00512 His Kinase A (phospho-acceptor) domain BF31_457 PF00989 PAS fold BF31_4574 PF12538 DNA transporter BF31_4574 PF01580 FtsK/SpoIIIE family BF31_4578 PF00152 tRNA synthetases class II (D, K and N) BF31_4578 PF01336 OB-fold nucleic acid binding domain BF31_4579 PF01225 Mur ligase family, catalytic domain BF31_4579 PF02875 Mur ligase family, glutamate ligase domain BF31_4579 PF08245 Mur ligase middle domain BF31_458 PF01872 RibD C-terminal domain BF31_4582 PF08264 Anticodon-binding domain of tRNA BF31_4582 PF00133 tRNA synthetases class I (I, L, M and V) BF31_4588 PF03485 Arginyl tRNA synthetase N terminal domain BF31_4588 PF00750 tRNA synthetases class I (R) BF31_4588 PF05746 DALR anticodon binding domain BF31_4589 PF04445 Putative SAM-dependent methyltransferase BF31_459 PF08279 HTH domain BF31_459 PF13280 WYL domain BF31_4590 PF06491 Disulphide isomerase BF31_4592 PF08712 Scaffold protein Nfu/NifU N terminal BF31_4592 PF13769 Virulence factor BF31_4593 PF01494 FAD binding domain BF31_4594 PF01494 FAD binding domain BF31_4595 PF00440 Bacterial regulatory proteins, tetR family BF31_4596 PF00436 Single-strand binding protein family BF31_4599 PF12848 ABC transporter BF31_4599 PF16326 ABC transporter C-terminal domain BF31_4599 PF00005 ABC transporter BF31_46 PF03703 Bacterial PH domain BF31_4600 PF01966 HD domain BF31_4603 PF01510 N-acetylmuramoyl-L-alanine amidase BF31_4606 PF04232 Stage V sporulation protein S (SpoVS) BF31_4613 PF04405 Domain of Unknown function (DUF542) BF31_4613 PF01814 Hemerythrin HHE cation binding domain BF31_4614 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BF31_4614 PF18267 Rubredoxin NAD+ reductase C-terminal domain BF31_4614 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF31_4614 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BF31_4614 PF04324 BFD-like [2Fe-2S] binding domain BF31_4615 PF00355 Rieske [2Fe-2S] domain BF31_4616 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BF31_4617 PF01903 CbiX BF31_4621 PF07690 Major Facilitator Superfamily BF31_4623 PF02391 MoaE protein BF31_4624 PF03453 MoeA N-terminal region (domain I and II) BF31_4624 PF03454 MoeA C-terminal region (domain IV) BF31_4624 PF00994 Probable molybdopterin binding domain BF31_4625 PF00899 ThiF family BF31_4626 PF04055 Radical SAM superfamily BF31_4626 PF06463 Molybdenum Cofactor Synthesis C BF31_4627 PF00325 Bacterial regulatory proteins, crp family BF31_4627 PF00027 Cyclic nucleotide-binding domain BF31_4629 PF00005 ABC transporter BF31_4630 PF00155 Aminotransferase class I and II BF31_4630 PF00392 Bacterial regulatory proteins, gntR family BF31_4631 PF02665 Nitrate reductase gamma subunit BF31_4632 PF02613 Nitrate reductase delta subunit BF31_4633 PF14711 Respiratory nitrate reductase beta C-terminal BF31_4633 PF13247 4Fe-4S dicluster domain BF31_4634 PF14710 Respiratory nitrate reductase alpha N-terminal BF31_4634 PF01568 Molydopterin dinucleotide binding domain BF31_4634 PF00384 Molybdopterin oxidoreductase BF31_4637 PF07726 ATPase family associated with various cellular activities (AAA) BF31_4637 PF17863 AAA lid domain BF31_4638 PF01882 Protein of unknown function DUF58 BF31_4639 PF11992 Domain of unknown function (DUF3488) BF31_4639 PF13559 Domain of unknown function (DUF4129) BF31_4639 PF01841 Transglutaminase-like superfamily BF31_464 PF00324 Amino acid permease BF31_4640 PF00255 Glutathione peroxidase BF31_4645 PF08281 Sigma-70, region 4 BF31_4645 PF04542 Sigma-70 region 2 BF31_4646 PF00107 Zinc-binding dehydrogenase BF31_4646 PF08240 Alcohol dehydrogenase GroES-like domain BF31_4648 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF31_4649 PF01261 Xylose isomerase-like TIM barrel BF31_465 PF00528 Binding-protein-dependent transport system inner membrane component BF31_4650 PF00271 Helicase conserved C-terminal domain BF31_4650 PF00270 DEAD/DEAH box helicase BF31_4652 PF01268 Formate--tetrahydrofolate ligase BF31_4653 PF01209 ubiE/COQ5 methyltransferase family BF31_4658 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BF31_466 PF00528 Binding-protein-dependent transport system inner membrane component BF31_4667 PF00583 Acetyltransferase (GNAT) family BF31_467 PF00497 Bacterial extracellular solute-binding proteins, family 3 BF31_4673 PF00155 Aminotransferase class I and II BF31_4673 PF00392 Bacterial regulatory proteins, gntR family BF31_4674 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF31_4674 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF31_4675 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BF31_4679 PF01168 Alanine racemase, N-terminal domain BF31_4679 PF00842 Alanine racemase, C-terminal domain BF31_468 PF00005 ABC transporter BF31_4682 PF00300 Histidine phosphatase superfamily (branch 1) BF31_4683 PF01145 SPFH domain / Band 7 family BF31_4685 PF07690 Major Facilitator Superfamily BF31_4686 PF01425 Amidase BF31_4688 PF02557 D-alanyl-D-alanine carboxypeptidase BF31_469 PF01235 Sodium:alanine symporter family BF31_4690 PF07454 Stage II sporulation protein P (SpoIIP) BF31_4694 PF01588 Putative tRNA binding domain BF31_4695 PF05525 Branched-chain amino acid transport protein BF31_4698 PF00571 CBS domain BF31_4698 PF03471 Transporter associated domain BF31_4698 PF01595 Cyclin M transmembrane N-terminal domain BF31_4699 PF04306 Protein of unknown function (DUF456) BF31_470 PF01636 Phosphotransferase enzyme family BF31_4700 PF13460 NAD(P)H-binding BF31_4703 PF13091 PLD-like domain BF31_4703 PF13396 Phospholipase_D-nuclease N-terminal BF31_4704 PF03061 Thioesterase superfamily BF31_4705 PF09323 Domain of unknown function (DUF1980) BF31_4706 PF03773 Predicted permease BF31_4708 PF14667 Polysaccharide biosynthesis C-terminal domain BF31_4708 PF01943 Polysaccharide biosynthesis protein BF31_4709 PF09335 SNARE associated Golgi protein BF31_4710 PF00293 NUDIX domain BF31_4711 PF08757 CotH kinase protein BF31_4713 PF00300 Histidine phosphatase superfamily (branch 1) BF31_4715 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF31_4716 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF31_4718 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BF31_4718 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BF31_4719 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BF31_472 PF03323 Bacillus/Clostridium GerA spore germination protein BF31_4720 PF13460 NAD(P)H-binding BF31_4722 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment BF31_4722 PF01297 Zinc-uptake complex component A periplasmic BF31_4733 PF00583 Acetyltransferase (GNAT) family BF31_4734 PF02492 CobW/HypB/UreG, nucleotide-binding domain BF31_4734 PF07683 Cobalamin synthesis protein cobW C-terminal domain BF31_4735 PF00248 Aldo/keto reductase family BF31_4737 PF01593 Flavin containing amine oxidoreductase BF31_4739 PF00296 Luciferase-like monooxygenase BF31_4742 PF00210 Ferritin-like domain BF31_4746 PF00672 HAMP domain BF31_4746 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF31_4746 PF02743 Cache domain BF31_4747 PF03193 RsgA GTPase BF31_4751 PF07690 Major Facilitator Superfamily BF31_4752 PF00248 Aldo/keto reductase family BF31_4753 PF01022 Bacterial regulatory protein, arsR family BF31_4754 PF00082 Subtilase family BF31_4755 PF18277 AbrB C-terminal domain BF31_4755 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BF31_4756 PF02687 FtsX-like permease family BF31_4757 PF02687 FtsX-like permease family BF31_4758 PF02540 NAD synthase BF31_4759 PF13344 Haloacid dehalogenase-like hydrolase BF31_4759 PF00293 NUDIX domain BF31_476 PF16657 Maltogenic Amylase, C-terminal domain BF31_476 PF00128 Alpha amylase, catalytic domain BF31_4764 PF01734 Patatin-like phospholipase BF31_4766 PF01810 LysE type translocator BF31_4767 PF07690 Major Facilitator Superfamily BF31_4768 PF07690 Major Facilitator Superfamily BF31_4769 PF00269 Small, acid-soluble spore proteins, alpha/beta type BF31_477 PF00367 phosphotransferase system, EIIB BF31_477 PF02378 Phosphotransferase system, EIIC BF31_4770 PF01261 Xylose isomerase-like TIM barrel BF31_4773 PF13193 AMP-binding enzyme C-terminal domain BF31_4773 PF00501 AMP-binding enzyme BF31_4774 PF04183 IucA / IucC family BF31_4774 PF06276 Ferric iron reductase FhuF-like transporter BF31_4775 PF04183 IucA / IucC family BF31_4775 PF06276 Ferric iron reductase FhuF-like transporter BF31_4776 PF00583 Acetyltransferase (GNAT) family BF31_4777 PF02308 MgtC family BF31_4779 PF01522 Polysaccharide deacetylase BF31_478 PF00392 Bacterial regulatory proteins, gntR family BF31_478 PF07702 UTRA domain BF31_4780 PF00989 PAS fold BF31_4780 PF00512 His Kinase A (phospho-acceptor) domain BF31_4780 PF16736 Single Cache-like BF31_4780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_4781 PF00072 Response regulator receiver domain BF31_4781 PF00486 Transcriptional regulatory protein, C terminal BF31_4783 PF03816 Cell envelope-related transcriptional attenuator domain BF31_4786 PF08544 GHMP kinases C terminal BF31_4786 PF00288 GHMP kinases N terminal domain BF31_4787 PF00291 Pyridoxal-phosphate dependent enzyme BF31_4788 PF00742 Homoserine dehydrogenase BF31_4788 PF03447 Homoserine dehydrogenase, NAD binding domain BF31_4788 PF01842 ACT domain BF31_479 PF13520 Amino acid permease BF31_4792 PF01522 Polysaccharide deacetylase BF31_4792 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain BF31_4793 PF04439 Streptomycin adenylyltransferase BF31_4794 PF00106 short chain dehydrogenase BF31_4796 PF16736 Single Cache-like BF31_4796 PF00989 PAS fold BF31_4796 PF00512 His Kinase A (phospho-acceptor) domain BF31_4796 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_4797 PF00486 Transcriptional regulatory protein, C terminal BF31_4797 PF00072 Response regulator receiver domain BF31_4798 PF00005 ABC transporter BF31_4798 PF00664 ABC transporter transmembrane region BF31_4799 PF00005 ABC transporter BF31_4799 PF00664 ABC transporter transmembrane region BF31_480 PF00563 EAL domain BF31_480 PF00990 Diguanylate cyclase, GGDEF domain BF31_480 PF03707 Bacterial signalling protein N terminal repeat BF31_4801 PF00877 NlpC/P60 family BF31_4801 PF01476 LysM domain BF31_4803 PF00768 D-alanyl-D-alanine carboxypeptidase BF31_4803 PF07943 Penicillin-binding protein 5, C-terminal domain BF31_4804 PF17676 LD-carboxypeptidase C-terminal domain BF31_4804 PF02016 LD-carboxypeptidase N-terminal domain BF31_4807 PF00664 ABC transporter transmembrane region BF31_4807 PF00005 ABC transporter BF31_4808 PF00005 ABC transporter BF31_4808 PF00664 ABC transporter transmembrane region BF31_4809 PF02322 Cytochrome bd terminal oxidase subunit II BF31_4810 PF01654 Cytochrome bd terminal oxidase subunit I BF31_4812 PF01047 MarR family BF31_4816 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF31_4816 PF03466 LysR substrate binding domain BF31_4818 PF02653 Branched-chain amino acid transport system / permease component BF31_4819 PF00005 ABC transporter BF31_4820 PF00005 ABC transporter BF31_4820 PF12399 Branched-chain amino acid ATP-binding cassette transporter BF31_4822 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BF31_4822 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BF31_4823 PF01575 MaoC like domain BF31_4824 PF13193 AMP-binding enzyme C-terminal domain BF31_4824 PF00501 AMP-binding enzyme BF31_4827 PF07683 Cobalamin synthesis protein cobW C-terminal domain BF31_4827 PF02492 CobW/HypB/UreG, nucleotide-binding domain BF31_4828 PF01593 Flavin containing amine oxidoreductase BF31_4829 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BF31_4829 PF00056 lactate/malate dehydrogenase, NAD binding domain BF31_483 PF13396 Phospholipase_D-nuclease N-terminal BF31_483 PF13091 PLD-like domain BF31_4830 PF01594 AI-2E family transporter BF31_4831 PF01425 Amidase BF31_4833 PF00881 Nitroreductase family BF31_4834 PF01323 DSBA-like thioredoxin domain BF31_4835 PF02082 Transcriptional regulator BF31_4836 PF03466 LysR substrate binding domain BF31_4836 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF31_4837 PF00892 EamA-like transporter family BF31_4839 PF07987 Domain of unkown function (DUF1775) BF31_484 PF07728 AAA domain (dynein-related subfamily) BF31_4840 PF04234 CopC domain BF31_4840 PF05425 Copper resistance protein D BF31_4840 PF13115 YtkA-like BF31_4842 PF05525 Branched-chain amino acid transport protein BF31_4843 PF05525 Branched-chain amino acid transport protein BF31_4844 PF02525 Flavodoxin-like fold BF31_4849 PF01551 Peptidase family M23 BF31_485 PF00092 von Willebrand factor type A domain BF31_4850 PF00394 Multicopper oxidase BF31_4850 PF07731 Multicopper oxidase BF31_4850 PF07732 Multicopper oxidase BF31_4851 PF07732 Multicopper oxidase BF31_4851 PF07731 Multicopper oxidase BF31_4852 PF00557 Metallopeptidase family M24 BF31_4852 PF05195 Aminopeptidase P, N-terminal domain BF31_4856 PF05979 Bacterial protein of unknown function (DUF896) BF31_4857 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BF31_4858 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BF31_4858 PF00591 Glycosyl transferase family, a/b domain BF31_4858 PF02885 Glycosyl transferase family, helical bundle domain BF31_4859 PF07662 Na+ dependent nucleoside transporter C-terminus BF31_4859 PF01773 Na+ dependent nucleoside transporter N-terminus BF31_486 PF00293 NUDIX domain BF31_486 PF13344 Haloacid dehalogenase-like hydrolase BF31_4860 PF01791 DeoC/LacD family aldolase BF31_4861 PF04198 Putative sugar-binding domain BF31_4863 PF05791 Bacillus haemolytic enterotoxin (HBL) BF31_4864 PF05791 Bacillus haemolytic enterotoxin (HBL) BF31_4866 PF13520 Amino acid permease BF31_4867 PF13520 Amino acid permease BF31_4869 PF08546 Ketopantoate reductase PanE/ApbA C terminal BF31_4869 PF02558 Ketopantoate reductase PanE/ApbA BF31_487 PF01370 NAD dependent epimerase/dehydratase family BF31_4872 PF01566 Natural resistance-associated macrophage protein BF31_4874 PF00512 His Kinase A (phospho-acceptor) domain BF31_4874 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_4876 PF00072 Response regulator receiver domain BF31_4876 PF00486 Transcriptional regulatory protein, C terminal BF31_4877 PF13302 Acetyltransferase (GNAT) domain BF31_4878 PF04055 Radical SAM superfamily BF31_4878 PF13186 Iron-sulfur cluster-binding domain BF31_488 PF00155 Aminotransferase class I and II BF31_4883 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF31_4884 PF12146 Serine aminopeptidase, S33 BF31_4884 PF13026 Protein of unknown function (DUF3887) BF31_4885 PF01979 Amidohydrolase family BF31_4889 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BF31_4889 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BF31_489 PF08241 Methyltransferase domain BF31_4890 PF00072 Response regulator receiver domain BF31_4890 PF04397 LytTr DNA-binding domain BF31_4892 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BF31_4893 PF07690 Major Facilitator Superfamily BF31_4896 PF09587 Bacterial capsule synthesis protein PGA_cap BF31_4898 PF00291 Pyridoxal-phosphate dependent enzyme BF31_4898 PF00585 C-terminal regulatory domain of Threonine dehydratase BF31_4899 PF00920 Dehydratase family BF31_490 PF00005 ABC transporter BF31_4900 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BF31_4900 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BF31_4901 PF10369 Small subunit of acetolactate synthase BF31_4902 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BF31_4902 PF00205 Thiamine pyrophosphate enzyme, central domain BF31_4902 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BF31_4903 PF01063 Amino-transferase class IV BF31_4905 PF01625 Peptide methionine sulfoxide reductase BF31_4909 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BF31_4909 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BF31_491 PF01032 FecCD transport family BF31_4912 PF04239 Protein of unknown function (DUF421) BF31_4914 PF01522 Polysaccharide deacetylase BF31_4914 PF00457 Glycosyl hydrolases family 11 BF31_4914 PF03422 Carbohydrate binding module (family 6) BF31_4915 PF00209 Sodium:neurotransmitter symporter family BF31_4916 PF01943 Polysaccharide biosynthesis protein BF31_4916 PF14667 Polysaccharide biosynthesis C-terminal domain BF31_4919 PF00291 Pyridoxal-phosphate dependent enzyme BF31_492 PF01032 FecCD transport family BF31_4920 PF07690 Major Facilitator Superfamily BF31_4921 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF31_4923 PF16360 GTP-binding GTPase Middle Region BF31_4923 PF13167 GTP-binding GTPase N-terminal BF31_4923 PF01926 50S ribosome-binding GTPase BF31_4925 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BF31_4925 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BF31_4926 PF07690 Major Facilitator Superfamily BF31_4927 PF07690 Major Facilitator Superfamily BF31_4928 PF03976 Polyphosphate kinase 2 (PPK2) BF31_4929 PF02554 Carbon starvation protein CstA BF31_493 PF01497 Periplasmic binding protein BF31_4932 PF07690 Major Facilitator Superfamily BF31_4934 PF00395 S-layer homology domain BF31_4934 PF13205 Bacterial Ig-like domain BF31_4934 PF02368 Bacterial Ig-like domain (group 2) BF31_4935 PF00293 NUDIX domain BF31_4936 PF14158 YndJ-like protein BF31_4937 PF13761 Domain of unknown function (DUF4166) BF31_494 PF00854 POT family BF31_4940 PF00696 Amino acid kinase family BF31_4940 PF13840 ACT domain BF31_4944 PF03590 Aspartate-ammonia ligase BF31_4946 PF04434 SWIM zinc finger BF31_4946 PF00176 SNF2 family N-terminal domain BF31_4946 PF00271 Helicase conserved C-terminal domain BF31_4947 PF08664 YcbB domain BF31_4947 PF00072 Response regulator receiver domain BF31_4948 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_4949 PF00390 Malic enzyme, N-terminal domain BF31_4949 PF03949 Malic enzyme, NAD binding domain BF31_495 PF08141 Small acid-soluble spore protein H family BF31_4950 PF00206 Lyase BF31_4950 PF10415 Fumarase C C-terminus BF31_4951 PF00375 Sodium:dicarboxylate symporter family BF31_4952 PF00696 Amino acid kinase family BF31_4957 PF00005 ABC transporter BF31_4958 PF13492 GAF domain BF31_4958 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_4958 PF13185 GAF domain BF31_4958 PF07730 Histidine kinase BF31_4959 PF00196 Bacterial regulatory proteins, luxR family BF31_4959 PF00072 Response regulator receiver domain BF31_496 PF01022 Bacterial regulatory protein, arsR family BF31_4964 PF04286 Protein of unknown function (DUF445) BF31_4965 PF00291 Pyridoxal-phosphate dependent enzyme BF31_497 PF02652 L-lactate permease BF31_4970 PF00578 AhpC/TSA family BF31_4971 PF02683 Cytochrome C biogenesis protein transmembrane region BF31_4975 PF03575 Peptidase family S51 BF31_4976 PF01554 MatE BF31_4977 PF01554 MatE BF31_498 PF00206 Lyase BF31_498 PF10415 Fumarase C C-terminus BF31_4981 PF10415 Fumarase C C-terminus BF31_4981 PF00206 Lyase BF31_4982 PF03553 Na+/H+ antiporter family BF31_4983 PF00535 Glycosyl transferase family 2 BF31_4985 PF03773 Predicted permease BF31_4986 PF02492 CobW/HypB/UreG, nucleotide-binding domain BF31_4986 PF07683 Cobalamin synthesis protein cobW C-terminal domain BF31_4987 PF00892 EamA-like transporter family BF31_4988 PF07729 FCD domain BF31_4988 PF00392 Bacterial regulatory proteins, gntR family BF31_499 PF00571 CBS domain BF31_499 PF01595 Cyclin M transmembrane N-terminal domain BF31_499 PF03471 Transporter associated domain BF31_4990 PF01545 Cation efflux family BF31_4990 PF16916 Dimerisation domain of Zinc Transporter BF31_4994 PF13537 Glutamine amidotransferase domain BF31_4994 PF00733 Asparagine synthase BF31_5 PF12833 Helix-turn-helix domain BF31_5 PF06445 GyrI-like small molecule binding domain BF31_500 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF31_5001 PF00300 Histidine phosphatase superfamily (branch 1) BF31_5003 PF07943 Penicillin-binding protein 5, C-terminal domain BF31_5003 PF00768 D-alanyl-D-alanine carboxypeptidase BF31_5006 PF10787 Uncharacterised protein from bacillus cereus group BF31_5008 PF00753 Metallo-beta-lactamase superfamily BF31_5008 PF12706 Beta-lactamase superfamily domain BF31_5009 PF00528 Binding-protein-dependent transport system inner membrane component BF31_501 PF07662 Na+ dependent nucleoside transporter C-terminus BF31_501 PF01773 Na+ dependent nucleoside transporter N-terminus BF31_5011 PF00005 ABC transporter BF31_5011 PF08402 TOBE domain BF31_5016 PF08141 Small acid-soluble spore protein H family BF31_5017 PF03992 Antibiotic biosynthesis monooxygenase BF31_502 PF03816 Cell envelope-related transcriptional attenuator domain BF31_5020 PF17329 Family of unknown function (DUF5367) BF31_5021 PF17932 Tetracyclin repressor-like, C-terminal domain BF31_5021 PF00440 Bacterial regulatory proteins, tetR family BF31_5026 PF02272 DHHA1 domain BF31_5026 PF01411 tRNA synthetases class II (A) BF31_5026 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BF31_5027 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BF31_5027 PF00460 Flagella basal body rod protein BF31_5028 PF00448 SRP54-type protein, GTPase domain BF31_5029 PF00771 FHIPEP family BF31_503 PF04294 VanW like protein BF31_5030 PF01312 FlhB HrpN YscU SpaS Family BF31_5032 PF01313 Bacterial export proteins, family 3 BF31_5033 PF00813 FliP family BF31_5035 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BF31_5035 PF04509 CheC-like family BF31_5037 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BF31_5037 PF02154 Flagellar motor switch protein FliM BF31_5038 PF01464 Transglycosylase SLT domain BF31_5039 PF00669 Bacterial flagellin N-terminal helical region BF31_5039 PF00700 Bacterial flagellin C-terminal helical region BF31_5044 PF00535 Glycosyl transferase family 2 BF31_5044 PF13181 Tetratricopeptide repeat BF31_5050 PF00535 Glycosyl transferase family 2 BF31_5051 PF12181 DNA binding domain of the motility gene repressor (MogR) BF31_5052 PF01584 CheW-like domain BF31_5052 PF00072 Response regulator receiver domain BF31_5056 PF07559 Flagellar basal body protein FlaE BF31_5056 PF00460 Flagella basal body rod protein BF31_5056 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BF31_5061 PF18269 T3SS EscN ATPase C-terminal domain BF31_5061 PF02874 ATP synthase alpha/beta family, beta-barrel domain BF31_5061 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BF31_5063 PF14841 FliG middle domain BF31_5063 PF14842 FliG N-terminal domain BF31_5063 PF01706 FliG C-terminal domain BF31_5065 PF01514 Secretory protein of YscJ/FliF family BF31_5065 PF08345 Flagellar M-ring protein C-terminal BF31_5066 PF02049 Flagellar hook-basal body complex protein FliE BF31_5067 PF00460 Flagella basal body rod protein BF31_5067 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BF31_5068 PF00460 Flagella basal body rod protein BF31_507 PF03413 Peptidase propeptide and YPEB domain BF31_507 PF07504 Fungalysin/Thermolysin Propeptide Motif BF31_507 PF01447 Thermolysin metallopeptidase, catalytic domain BF31_507 PF02868 Thermolysin metallopeptidase, alpha-helical domain BF31_5073 PF00700 Bacterial flagellin C-terminal helical region BF31_5073 PF00669 Bacterial flagellin N-terminal helical region BF31_5079 PF01739 CheR methyltransferase, SAM binding domain BF31_5079 PF03705 CheR methyltransferase, all-alpha domain BF31_5082 PF04509 CheC-like family BF31_5082 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BF31_5083 PF07194 P2 response regulator binding domain BF31_5083 PF01627 Hpt domain BF31_5083 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_5083 PF02895 Signal transducing histidine kinase, homodimeric domain BF31_5083 PF01584 CheW-like domain BF31_5084 PF02895 Signal transducing histidine kinase, homodimeric domain BF31_5084 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_5084 PF01627 Hpt domain BF31_5084 PF07194 P2 response regulator binding domain BF31_5084 PF01584 CheW-like domain BF31_5085 PF00072 Response regulator receiver domain BF31_5086 PF00691 OmpA family BF31_5086 PF13677 Membrane MotB of proton-channel complex MotA/MotB BF31_5087 PF01618 MotA/TolQ/ExbB proton channel family BF31_5089 PF17209 Hfq protein BF31_5098 PF00881 Nitroreductase family BF31_510 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BF31_510 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BF31_510 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain BF31_5100 PF02698 DUF218 domain BF31_5101 PF04239 Protein of unknown function (DUF421) BF31_5103 PF06445 GyrI-like small molecule binding domain BF31_5103 PF13411 MerR HTH family regulatory protein BF31_5104 PF00753 Metallo-beta-lactamase superfamily BF31_5104 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BF31_5104 PF17770 Ribonuclease J C-terminal domain BF31_5105 PF00999 Sodium/hydrogen exchanger family BF31_5107 PF00202 Aminotransferase class-III BF31_5108 PF00474 Sodium:solute symporter family BF31_5109 PF04341 Protein of unknown function, DUF485 BF31_511 PF00403 Heavy-metal-associated domain BF31_5112 PF01810 LysE type translocator BF31_5114 PF00313 'Cold-shock' DNA-binding domain BF31_5119 PF01263 Aldose 1-epimerase BF31_512 PF01022 Bacterial regulatory protein, arsR family BF31_5120 PF13456 Reverse transcriptase-like BF31_5124 PF18014 Acetyltransferase (GNAT) domain BF31_5124 PF13673 Acetyltransferase (GNAT) domain BF31_5127 PF00534 Glycosyl transferases group 1 BF31_5127 PF13439 Glycosyltransferase Family 4 BF31_5128 PF00535 Glycosyl transferase family 2 BF31_513 PF13520 Amino acid permease BF31_5131 PF02397 Bacterial sugar transferase BF31_5138 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BF31_5138 PF01367 5'-3' exonuclease, C-terminal SAM fold BF31_5139 PF00690 Cation transporter/ATPase, N-terminus BF31_5139 PF00689 Cation transporting ATPase, C-terminus BF31_514 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BF31_514 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BF31_5141 PF03738 Glutathionylspermidine synthase preATP-grasp BF31_5144 PF00581 Rhodanese-like domain BF31_5145 PF10752 Protein of unknown function (DUF2533) BF31_5146 PF00583 Acetyltransferase (GNAT) family BF31_5148 PF00350 Dynamin family BF31_5150 PF04235 Protein of unknown function (DUF418) BF31_5151 PF00860 Permease family BF31_5152 PF00156 Phosphoribosyl transferase domain BF31_5153 PF00557 Metallopeptidase family M24 BF31_5154 PF01636 Phosphotransferase enzyme family BF31_5156 PF02074 Carboxypeptidase Taq (M32) metallopeptidase BF31_5157 PF13307 Helicase C-terminal domain BF31_5159 PF02926 THUMP domain BF31_5159 PF01170 Putative RNA methylase family UPF0020 BF31_5160 PF05103 DivIVA protein BF31_5161 PF06908 YspA SLOG family BF31_5168 PF10720 Protein of unknown function (DUF2515) BF31_5169 PF03838 Recombination protein U BF31_5170 PF00905 Penicillin binding protein transpeptidase domain BF31_5170 PF00912 Transglycosylase BF31_5172 PF10576 Iron-sulfur binding domain of endonuclease III BF31_5172 PF00730 HhH-GPD superfamily base excision DNA repair protein BF31_5172 PF00633 Helix-hairpin-helix motif BF31_5173 PF07261 Replication initiation and membrane attachment BF31_5174 PF00155 Aminotransferase class I and II BF31_5176 PF14084 Protein of unknown function (DUF4264) BF31_5177 PF00929 Exonuclease BF31_5177 PF04851 Type III restriction enzyme, res subunit BF31_5177 PF13307 Helicase C-terminal domain BF31_5178 PF02261 Aspartate decarboxylase BF31_5179 PF02569 Pantoate-beta-alanine ligase BF31_518 PF00384 Molybdopterin oxidoreductase BF31_518 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BF31_518 PF01568 Molydopterin dinucleotide binding domain BF31_518 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BF31_518 PF00037 4Fe-4S binding domain BF31_5180 PF02548 Ketopantoate hydroxymethyltransferase BF31_5182 PF03099 Biotin/lipoate A/B protein ligase family BF31_5182 PF02237 Biotin protein ligase C terminal domain BF31_5182 PF08279 HTH domain BF31_5183 PF12627 Probable RNA and SrmB- binding site of polymerase A BF31_5183 PF01743 Poly A polymerase head domain BF31_5183 PF13735 tRNA nucleotidyltransferase domain 2 putative BF31_5184 PF13439 Glycosyltransferase Family 4 BF31_5184 PF00534 Glycosyl transferases group 1 BF31_5185 PF02585 GlcNAc-PI de-N-acetylase BF31_5186 PF02142 MGS-like domain BF31_5187 PF05173 Dihydrodipicolinate reductase, C-terminus BF31_5187 PF01113 Dihydrodipicolinate reductase, N-terminus BF31_5188 PF03819 MazG nucleotide pyrophosphohydrolase domain BF31_5189 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF31_5189 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF31_519 PF02634 FdhD/NarQ family BF31_5191 PF04298 Putative neutral zinc metallopeptidase BF31_5192 PF09577 Sporulation protein YpjB (SpoYpjB) BF31_5194 PF07187 Protein of unknown function (DUF1405) BF31_5195 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BF31_5195 PF00032 Cytochrome b(C-terminal)/b6/petD BF31_5196 PF00033 Cytochrome b/b6/petB BF31_5197 PF00355 Rieske [2Fe-2S] domain BF31_5198 PF10673 Protein of unknown function (DUF2487) BF31_5199 PF08864 UPF0302 domain BF31_5199 PF08858 IDEAL domain BF31_520 PF00583 Acetyltransferase (GNAT) family BF31_520 PF13508 Acetyltransferase (GNAT) domain BF31_5201 PF00155 Aminotransferase class I and II BF31_5202 PF01761 3-dehydroquinate synthase BF31_5203 PF01264 Chorismate synthase BF31_5204 PF00334 Nucleoside diphosphate kinase BF31_5205 PF00348 Polyprenyl synthetase BF31_5206 PF01209 ubiE/COQ5 methyltransferase family BF31_5207 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 BF31_5208 PF01227 GTP cyclohydrolase I BF31_5209 PF00216 Bacterial DNA-binding protein BF31_5210 PF09547 Stage IV sporulation protein A (spore_IV_A) BF31_5212 PF10966 Protein of unknown function (DUF2768) BF31_5214 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BF31_5214 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BF31_5215 PF01926 50S ribosome-binding GTPase BF31_5215 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BF31_5217 PF14045 YIEGIA protein BF31_5219 PF14140 YpzI-like protein BF31_522 PF00072 Response regulator receiver domain BF31_522 PF00486 Transcriptional regulatory protein, C terminal BF31_5220 PF01070 FMN-dependent dehydrogenase BF31_5221 PF00575 S1 RNA binding domain BF31_5222 PF02224 Cytidylate kinase BF31_5224 PF00710 Asparaginase, N-terminal BF31_5224 PF17763 Glutaminase/Asparaginase C-terminal domain BF31_5229 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BF31_5229 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BF31_5230 PF05389 Negative regulator of genetic competence (MecA) BF31_5231 PF02607 B12 binding domain BF31_5231 PF02310 B12 binding domain BF31_5231 PF13411 MerR HTH family regulatory protein BF31_5232 PF00149 Calcineurin-like phosphoesterase BF31_5234 PF02517 CPBP intramembrane metalloprotease BF31_5235 PF00271 Helicase conserved C-terminal domain BF31_5235 PF00270 DEAD/DEAH box helicase BF31_5236 PF14493 Helix-turn-helix domain BF31_5238 PF12822 ECF transporter, substrate-specific component BF31_5241 PF01923 Cobalamin adenosyltransferase BF31_5242 PF00989 PAS fold BF31_5242 PF00672 HAMP domain BF31_5242 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_5242 PF18698 Histidine kinase sensor domain BF31_5242 PF00512 His Kinase A (phospho-acceptor) domain BF31_5243 PF00486 Transcriptional regulatory protein, C terminal BF31_5243 PF00072 Response regulator receiver domain BF31_5244 PF01578 Cytochrome C assembly protein BF31_5245 PF05140 ResB-like family BF31_5246 PF00578 AhpC/TSA family BF31_5247 PF00849 RNA pseudouridylate synthase BF31_5247 PF01479 S4 domain BF31_5248 PF07670 Nucleoside recognition BF31_5249 PF07670 Nucleoside recognition BF31_5250 PF00768 D-alanyl-D-alanine carboxypeptidase BF31_5250 PF07943 Penicillin-binding protein 5, C-terminal domain BF31_5251 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BF31_5251 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BF31_5254 PF03706 Lysylphosphatidylglycerol synthase TM region BF31_5254 PF09924 Uncharacterised conserved protein (DUF2156) BF31_5257 PF01048 Phosphorylase superfamily BF31_5258 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_5258 PF00512 His Kinase A (phospho-acceptor) domain BF31_5258 PF00989 PAS fold BF31_5258 PF16736 Single Cache-like BF31_5259 PF00589 Phage integrase family BF31_526 PF00155 Aminotransferase class I and II BF31_526 PF00392 Bacterial regulatory proteins, gntR family BF31_5261 PF01904 Protein of unknown function DUF72 BF31_5262 PF00989 PAS fold BF31_5262 PF00512 His Kinase A (phospho-acceptor) domain BF31_5262 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_5265 PF00912 Transglycosylase BF31_5265 PF00905 Penicillin binding protein transpeptidase domain BF31_5266 PF01865 Protein of unknown function DUF47 BF31_5267 PF01384 Phosphate transporter family BF31_5268 PF01925 Sulfite exporter TauE/SafE BF31_527 PF00892 EamA-like transporter family BF31_5271 PF00970 Oxidoreductase FAD-binding domain BF31_5271 PF00042 Globin BF31_5271 PF00175 Oxidoreductase NAD-binding domain BF31_5276 PF08241 Methyltransferase domain BF31_5278 PF05525 Branched-chain amino acid transport protein BF31_5280 PF00196 Bacterial regulatory proteins, luxR family BF31_5280 PF00072 Response regulator receiver domain BF31_5281 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_5281 PF07730 Histidine kinase BF31_5281 PF00672 HAMP domain BF31_5282 PF09922 Cell wall-active antibiotics response 4TMS YvqF BF31_5285 PF03553 Na+/H+ antiporter family BF31_5287 PF00375 Sodium:dicarboxylate symporter family BF31_5289 PF00209 Sodium:neurotransmitter symporter family BF31_529 PF03949 Malic enzyme, NAD binding domain BF31_529 PF00390 Malic enzyme, N-terminal domain BF31_5291 PF01903 CbiX BF31_5292 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BF31_5294 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BF31_5294 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BF31_5296 PF14306 PUA-like domain BF31_5296 PF01747 ATP-sulfurylase BF31_5297 PF01507 Phosphoadenosine phosphosulfate reductase family BF31_5299 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BF31_5299 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BF31_530 PF03390 2-hydroxycarboxylate transporter family BF31_5301 PF00884 Sulfatase BF31_5302 PF01066 CDP-alcohol phosphatidyltransferase BF31_5303 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BF31_5303 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BF31_5305 PF02811 PHP domain BF31_5306 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BF31_5307 PF01502 Phosphoribosyl-AMP cyclohydrolase BF31_5308 PF00977 Histidine biosynthesis protein BF31_5309 PF00977 Histidine biosynthesis protein BF31_531 PF00072 Response regulator receiver domain BF31_5310 PF00117 Glutamine amidotransferase class-I BF31_5311 PF00475 Imidazoleglycerol-phosphate dehydratase BF31_5312 PF00815 Histidinol dehydrogenase BF31_5313 PF01634 ATP phosphoribosyltransferase BF31_5314 PF13393 Histidyl-tRNA synthetase BF31_5315 PF00694 Aconitase C-terminal domain BF31_5316 PF00330 Aconitase family (aconitate hydratase) BF31_5317 PF00180 Isocitrate/isopropylmalate dehydrogenase BF31_5318 PF08502 LeuA allosteric (dimerisation) domain BF31_5318 PF00682 HMGL-like BF31_5319 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BF31_5319 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BF31_532 PF00989 PAS fold BF31_532 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BF31_532 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_532 PF17203 Single cache domain 3 BF31_5320 PF01842 ACT domain BF31_5320 PF10369 Small subunit of acetolactate synthase BF31_5321 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BF31_5321 PF00205 Thiamine pyrophosphate enzyme, central domain BF31_5321 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BF31_5322 PF01063 Amino-transferase class IV BF31_5325 PF03698 Uncharacterised protein family (UPF0180) BF31_5327 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BF31_5329 PF02386 Cation transport protein BF31_533 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF31_533 PF02743 Cache domain BF31_533 PF00672 HAMP domain BF31_5330 PF00375 Sodium:dicarboxylate symporter family BF31_5332 PF01047 MarR family BF31_5335 PF02673 Bacitracin resistance protein BacA BF31_5336 PF01554 MatE BF31_534 PF13529 Peptidase_C39 like family BF31_5340 PF01636 Phosphotransferase enzyme family BF31_5343 PF00258 Flavodoxin BF31_5345 PF01546 Peptidase family M20/M25/M40 BF31_5345 PF07687 Peptidase dimerisation domain BF31_5347 PF13193 AMP-binding enzyme C-terminal domain BF31_5347 PF00501 AMP-binding enzyme BF31_5348 PF03062 MBOAT, membrane-bound O-acyltransferase family BF31_5349 PF00550 Phosphopantetheine attachment site BF31_5350 PF04914 DltD protein BF31_5351 PF03060 Nitronate monooxygenase BF31_5352 PF17676 LD-carboxypeptidase C-terminal domain BF31_5352 PF02016 LD-carboxypeptidase N-terminal domain BF31_5354 PF00857 Isochorismatase family BF31_5356 PF01037 Lrp/AsnC ligand binding domain BF31_536 PF00512 His Kinase A (phospho-acceptor) domain BF31_536 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_5360 PF00005 ABC transporter BF31_5362 PF00005 ABC transporter BF31_5363 PF00392 Bacterial regulatory proteins, gntR family BF31_5364 PF00268 Ribonucleotide reductase, small chain BF31_5365 PF02867 Ribonucleotide reductase, barrel domain BF31_5365 PF00317 Ribonucleotide reductase, all-alpha domain BF31_5365 PF08343 Ribonucleotide reductase N-terminal BF31_5367 PF02867 Ribonucleotide reductase, barrel domain BF31_5367 PF08343 Ribonucleotide reductase N-terminal BF31_5367 PF00317 Ribonucleotide reductase, all-alpha domain BF31_5368 PF07972 NrdI Flavodoxin like BF31_537 PF00072 Response regulator receiver domain BF31_537 PF00486 Transcriptional regulatory protein, C terminal BF31_5375 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) BF31_5376 PF14489 QueF-like protein BF31_5377 PF04055 Radical SAM superfamily BF31_5378 PF01242 6-pyruvoyl tetrahydropterin synthase BF31_5379 PF06508 Queuosine biosynthesis protein QueC BF31_538 PF00149 Calcineurin-like phosphoesterase BF31_5380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_5380 PF13426 PAS domain BF31_5380 PF00989 PAS fold BF31_5380 PF13188 PAS domain BF31_5380 PF00512 His Kinase A (phospho-acceptor) domain BF31_5382 PF12867 DinB superfamily BF31_5384 PF01047 MarR family BF31_5385 PF00512 His Kinase A (phospho-acceptor) domain BF31_5385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_5385 PF02743 Cache domain BF31_5386 PF09388 Spo0E like sporulation regulatory protein BF31_5387 PF04748 Divergent polysaccharide deacetylase BF31_5389 PF00596 Class II Aldolase and Adducin N-terminal domain BF31_539 PF13416 Bacterial extracellular solute-binding protein BF31_5390 PF00596 Class II Aldolase and Adducin N-terminal domain BF31_5391 PF01520 N-acetylmuramoyl-L-alanine amidase BF31_5391 PF00395 S-layer homology domain BF31_5395 PF08220 DeoR-like helix-turn-helix domain BF31_5395 PF00455 DeoR C terminal sensor domain BF31_5397 PF00266 Aminotransferase class-V BF31_5398 PF13419 Haloacid dehalogenase-like hydrolase BF31_5399 PF00528 Binding-protein-dependent transport system inner membrane component BF31_540 PF00528 Binding-protein-dependent transport system inner membrane component BF31_5401 PF00005 ABC transporter BF31_5402 PF08402 TOBE domain BF31_5402 PF00005 ABC transporter BF31_5407 PF02386 Cation transport protein BF31_5409 PF00561 alpha/beta hydrolase fold BF31_541 PF00528 Binding-protein-dependent transport system inner membrane component BF31_5414 PF01575 MaoC like domain BF31_5415 PF00269 Small, acid-soluble spore proteins, alpha/beta type BF31_5418 PF03741 Integral membrane protein TerC family BF31_5419 PF01226 Formate/nitrite transporter BF31_542 PF00005 ABC transporter BF31_542 PF17912 MalK OB fold domain BF31_5421 PF06750 Bacterial Peptidase A24 N-terminal domain BF31_5421 PF01478 Type IV leader peptidase family BF31_5422 PF02589 LUD domain BF31_5423 PF02589 LUD domain BF31_5423 PF13183 4Fe-4S dicluster domain BF31_5423 PF11870 Domain of unknown function (DUF3390) BF31_5424 PF02754 Cysteine-rich domain BF31_5425 PF07729 FCD domain BF31_5425 PF00392 Bacterial regulatory proteins, gntR family BF31_5426 PF00989 PAS fold BF31_5426 PF00672 HAMP domain BF31_5426 PF00512 His Kinase A (phospho-acceptor) domain BF31_5426 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_5426 PF18698 Histidine kinase sensor domain BF31_5427 PF00486 Transcriptional regulatory protein, C terminal BF31_5427 PF00072 Response regulator receiver domain BF31_5429 PF05651 Putative sugar diacid recognition BF31_5429 PF17853 GGDEF-like domain BF31_5429 PF13556 PucR C-terminal helix-turn-helix domain BF31_543 PF04309 Glycerol-3-phosphate responsive antiterminator BF31_5430 PF02913 FAD linked oxidases, C-terminal domain BF31_5430 PF01565 FAD binding domain BF31_5431 PF13183 4Fe-4S dicluster domain BF31_5431 PF02754 Cysteine-rich domain BF31_5432 PF00188 Cysteine-rich secretory protein family BF31_5434 PF01479 S4 domain BF31_5434 PF00849 RNA pseudouridylate synthase BF31_5436 PF03176 MMPL family BF31_5438 PF13416 Bacterial extracellular solute-binding protein BF31_5439 PF00528 Binding-protein-dependent transport system inner membrane component BF31_5440 PF00528 Binding-protein-dependent transport system inner membrane component BF31_5441 PF08402 TOBE domain BF31_5441 PF00005 ABC transporter BF31_5442 PF00171 Aldehyde dehydrogenase family BF31_5443 PF05547 Immune inhibitor A peptidase M6 BF31_5444 PF01381 Helix-turn-helix BF31_5444 PF08671 Anti-repressor SinI BF31_5445 PF12389 Camelysin metallo-endopeptidase BF31_5447 PF12389 Camelysin metallo-endopeptidase BF31_5449 PF07943 Penicillin-binding protein 5, C-terminal domain BF31_5449 PF00768 D-alanyl-D-alanine carboxypeptidase BF31_5451 PF13649 Methyltransferase domain BF31_5462 PF01381 Helix-turn-helix BF31_5463 PF16870 2-oxoglutarate dehydrogenase C-terminal BF31_5463 PF02779 Transketolase, pyrimidine binding domain BF31_5463 PF00676 Dehydrogenase E1 component BF31_5464 PF00364 Biotin-requiring enzyme BF31_5464 PF02817 e3 binding domain BF31_5464 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BF31_547 PF03600 Citrate transporter BF31_5470 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BF31_5470 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF31_5474 PF10042 Uncharacterized conserved protein (DUF2278) BF31_5475 PF02652 L-lactate permease BF31_5477 PF00290 Tryptophan synthase alpha chain BF31_5478 PF00291 Pyridoxal-phosphate dependent enzyme BF31_5479 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BF31_548 PF08279 HTH domain BF31_548 PF12431 Transcriptional regulator BF31_548 PF00072 Response regulator receiver domain BF31_5480 PF00218 Indole-3-glycerol phosphate synthase BF31_5481 PF00591 Glycosyl transferase family, a/b domain BF31_5481 PF02885 Glycosyl transferase family, helical bundle domain BF31_5482 PF00591 Glycosyl transferase family, a/b domain BF31_5482 PF00117 Glutamine amidotransferase class-I BF31_5482 PF02885 Glycosyl transferase family, helical bundle domain BF31_5484 PF00474 Sodium:solute symporter family BF31_5485 PF02368 Bacterial Ig-like domain (group 2) BF31_5488 PF00756 Putative esterase BF31_549 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_549 PF00989 PAS fold BF31_549 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BF31_549 PF17203 Single cache domain 3 BF31_5490 PF13673 Acetyltransferase (GNAT) domain BF31_5491 PF00580 UvrD/REP helicase N-terminal domain BF31_5491 PF13361 UvrD-like helicase C-terminal domain BF31_5494 PF07098 Protein of unknown function (DUF1360) BF31_5498 PF04321 RmlD substrate binding domain BF31_5499 PF16363 GDP-mannose 4,6 dehydratase BF31_550 PF00672 HAMP domain BF31_550 PF02743 Cache domain BF31_550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF31_5500 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BF31_5501 PF00483 Nucleotidyl transferase BF31_5505 PF13181 Tetratricopeptide repeat BF31_5505 PF00535 Glycosyl transferase family 2 BF31_5507 PF05711 Macrocin-O-methyltransferase (TylF) BF31_5508 PF08241 Methyltransferase domain BF31_5509 PF00535 Glycosyl transferase family 2 BF31_551 PF15975 Flotillin BF31_551 PF01145 SPFH domain / Band 7 family BF31_5510 PF01098 Cell cycle protein BF31_5511 PF01098 Cell cycle protein BF31_5512 PF00149 Calcineurin-like phosphoesterase BF31_5514 PF00849 RNA pseudouridylate synthase BF31_5515 PF01513 ATP-NAD kinase BF31_5516 PF04607 Region found in RelA / SpoT proteins BF31_5518 PF01928 CYTH domain BF31_5519 PF01152 Bacterial-like globin BF31_5522 PF08439 Oligopeptidase F BF31_5522 PF01432 Peptidase family M3 BF31_5524 PF13396 Phospholipase_D-nuclease N-terminal BF31_5524 PF13091 PLD-like domain BF31_5525 PF05389 Negative regulator of genetic competence (MecA) BF31_5526 PF03741 Integral membrane protein TerC family BF31_5527 PF03960 ArsC family BF31_5529 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF31_553 PF18496 Collagenase G catalytic helper subdomain BF31_553 PF01752 Collagenase BF31_553 PF08453 Peptidase family M9 N-terminal BF31_5530 PF01554 MatE BF31_5531 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF31_5531 PF00005 ABC transporter BF31_5532 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF31_5532 PF00005 ABC transporter BF31_5533 PF00528 Binding-protein-dependent transport system inner membrane component BF31_5533 PF12911 N-terminal TM domain of oligopeptide transport permease C BF31_5534 PF00528 Binding-protein-dependent transport system inner membrane component BF31_5535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF31_5537 PF00579 tRNA synthetases class I (W and Y) BF31_5538 PF12227 Protein of unknown function (DUF3603) BF31_5539 PF10026 Predicted Zn-dependent protease (DUF2268) BF31_554 PF02028 BCCT, betaine/carnitine/choline family transporter BF31_5540 PF00109 Beta-ketoacyl synthase, N-terminal domain BF31_5540 PF02801 Beta-ketoacyl synthase, C-terminal domain BF31_5541 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BF31_5541 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BF31_5542 PF10815 ComZ BF31_5546 PF07724 AAA domain (Cdc48 subfamily) BF31_5546 PF10431 C-terminal, D2-small domain, of ClpB protein BF31_5546 PF02861 Clp amino terminal domain, pathogenicity island component BF31_5546 PF17871 AAA lid domain BF31_5546 PF00004 ATPase family associated with various cellular activities (AAA) BF31_5547 PF14168 YjzC-like protein BF31_5550 PF12758 Protein of unknown function (DUF3813) BF31_5551 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF31_5551 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF31_5553 PF00639 PPIC-type PPIASE domain BF31_5555 PF17783 CvfB-like winged helix domain BF31_5555 PF13509 S1 domain BF31_5556 PF04461 Protein of unknown function (DUF520) BF31_5558 PF00128 Alpha amylase, catalytic domain BF31_5559 PF00909 Ammonium Transporter Family BF31_5560 PF00199 Catalase BF31_5560 PF06628 Catalase-related immune-responsive BF31_5562 PF00733 Asparagine synthase BF31_5562 PF13537 Glutamine amidotransferase domain BF31_5564 PF07457 Protein of unknown function (DUF1516) BF31_5565 PF00202 Aminotransferase class-III BF31_5569 PF10676 Spore germination protein gerPA/gerPF BF31_557 PF04285 Protein of unknown function (DUF444) BF31_5570 PF10803 Spore germination GerPB BF31_5571 PF10737 Spore germination protein GerPC BF31_5573 PF10970 Spore germination protein GerPE BF31_5574 PF10676 Spore germination protein gerPA/gerPF BF31_5576 PF13361 UvrD-like helicase C-terminal domain BF31_5576 PF00580 UvrD/REP helicase N-terminal domain BF31_5576 PF12705 PD-(D/E)XK nuclease superfamily BF31_5577 PF12705 PD-(D/E)XK nuclease superfamily BF31_5577 PF13361 UvrD-like helicase C-terminal domain BF31_5578 PF10502 Signal peptidase, peptidase S26 BF31_5579 PF09335 SNARE associated Golgi protein BF31_558 PF08298 PrkA AAA domain BF31_558 PF06798 PrkA serine protein kinase C-terminal domain BF31_5580 PF06338 ComK protein BF31_5583 PF00313 'Cold-shock' DNA-binding domain BF31_5585 PF00463 Isocitrate lyase family BF31_5586 PF01274 Malate synthase BF31_5587 PF00395 S-layer homology domain BF31_5589 PF03424 Carbohydrate binding domain (family 17/28) BF31_5589 PF00150 Cellulase (glycosyl hydrolase family 5) BF31_5589 PF00395 S-layer homology domain BF31_5590 PF00892 EamA-like transporter family BF31_5591 PF02743 Cache domain BF31_5591 PF00672 HAMP domain BF31_5591 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF31_5592 PF16491 CAAX prenyl protease N-terminal, five membrane helices BF31_5592 PF01435 Peptidase family M48 BF31_56 PF03703 Bacterial PH domain BF31_560 PF03707 Bacterial signalling protein N terminal repeat BF31_560 PF00990 Diguanylate cyclase, GGDEF domain BF31_560 PF00563 EAL domain BF31_5604 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BF31_5604 PF09397 Ftsk gamma domain BF31_5604 PF17854 FtsK alpha domain BF31_5604 PF01580 FtsK/SpoIIIE family BF31_5606 PF01609 Transposase DDE domain BF31_5607 PF01609 Transposase DDE domain BF31_561 PF00588 SpoU rRNA Methylase family BF31_5612 PF01609 Transposase DDE domain BF31_562 PF12671 Putative amidase domain BF31_5628 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BF31_563 PF08331 Domain of unknown function (DUF1730) BF31_565 PF13462 Thioredoxin BF31_5650 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BF31_5658 PF08378 Nuclease-related domain BF31_566 PF00905 Penicillin binding protein transpeptidase domain BF31_566 PF00912 Transglycosylase BF31_5664 PF01131 DNA topoisomerase BF31_5664 PF13342 C-terminal repeat of topoisomerase BF31_5664 PF01751 Toprim domain BF31_5666 PF00565 Staphylococcal nuclease homologue BF31_5669 PF02600 Disulfide bond formation protein DsbB BF31_567 PF00293 NUDIX domain BF31_567 PF13344 Haloacid dehalogenase-like hydrolase BF31_5670 PF01022 Bacterial regulatory protein, arsR family BF31_5671 PF17209 Hfq protein BF31_5673 PF18801 response regulator aspartate phosphatase H, N terminal BF31_5678 PF00589 Phage integrase family BF31_568 PF01709 Transcriptional regulator BF31_5680 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment BF31_5681 PF01609 Transposase DDE domain BF31_5682 PF13333 Integrase core domain BF31_5682 PF13276 HTH-like domain BF31_5682 PF00665 Integrase core domain BF31_5684 PF13333 Integrase core domain BF31_5684 PF00665 Integrase core domain BF31_5684 PF13276 HTH-like domain BF31_5687 PF00665 Integrase core domain BF31_5687 PF13276 HTH-like domain BF31_5687 PF13333 Integrase core domain BF31_5689 PF04740 LXG domain of WXG superfamily BF31_5689 PF14436 Bacterial EndoU nuclease BF31_5696 PF00589 Phage integrase family BF31_5696 PF02899 Phage integrase, N-terminal SAM-like domain BF31_5698 PF18277 AbrB C-terminal domain BF31_5698 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BF31_5703 PF09156 Anthrax toxin lethal factor, middle domain BF31_5703 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain BF31_5707 PF01022 Bacterial regulatory protein, arsR family BF31_5708 PF03495 Clostridial binary toxin B/anthrax toxin PA Ca-binding domain BF31_5708 PF17476 Clostridial binary toxin B/anthrax toxin PA domain 3 BF31_5708 PF17475 Clostridial binary toxin B/anthrax toxin PA domain 2 BF31_5708 PF07691 PA14 domain BF31_5710 PF05504 Spore germination B3/ GerAC like, C-terminal BF31_5711 PF03323 Bacillus/Clostridium GerA spore germination protein BF31_5712 PF03845 Spore germination protein BF31_5713 PF00239 Resolvase, N terminal domain BF31_5713 PF02796 Helix-turn-helix domain of resolvase BF31_5714 PF13700 Domain of unknown function (DUF4158) BF31_5714 PF01526 Tn3 transposase DDE domain BF31_5718 PF09385 Histidine kinase N terminal BF31_5719 PF05043 Mga helix-turn-helix domain BF31_5719 PF08279 HTH domain BF31_5719 PF00874 PRD domain BF31_5724 PF00156 Phosphoribosyl transferase domain BF31_5725 PF00156 Phosphoribosyl transferase domain BF31_5726 PF03497 Anthrax toxin LF subunit BF31_5726 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain BF31_5733 PF13333 Integrase core domain BF31_5733 PF00665 Integrase core domain BF31_5733 PF13276 HTH-like domain BF31_5734 PF00665 Integrase core domain BF31_5734 PF13333 Integrase core domain BF31_5734 PF13276 HTH-like domain BF31_5738 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BF31_5738 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BF31_5738 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BF31_5739 PF00483 Nucleotidyl transferase BF31_5740 PF00535 Glycosyl transferase family 2 BF31_5743 PF01569 PAP2 superfamily BF31_5744 PF00395 S-layer homology domain BF31_5750 PF04235 Protein of unknown function (DUF418) BF31_5753 PF10087 Uncharacterized protein conserved in bacteria (DUF2325) BF31_5780 PF00437 Type II/IV secretion system protein BF31_5792 PF05043 Mga helix-turn-helix domain BF31_5792 PF08280 M protein trans-acting positive regulator (MGA) HTH domain BF31_5792 PF00874 PRD domain BF31_5796 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF31_5798 PF13152 Protein of unknown function (DUF3967) BF31_5798 PF13411 MerR HTH family regulatory protein BF31_5799 PF11799 impB/mucB/samB family C-terminal domain BF31_5799 PF00817 impB/mucB/samB family BF31_5799 PF11798 IMS family HHH motif BF31_58 PF03703 Bacterial PH domain BF31_5803 PF17443 Uncharacterized protein pXO2-72 BF31_5809 PF01131 DNA topoisomerase BF31_5809 PF01751 Toprim domain BF31_5810 PF01751 Toprim domain BF31_5810 PF01131 DNA topoisomerase BF31_5811 PF13154 Protein of unknown function (DUF3991) BF31_5814 PF18840 Large polyvalent protein associated domain 25 BF31_5815 PF17630 Family of unknown function (DUF5511) BF31_5816 PF17633 Family of unknown function (DUF5514) BF31_5822 PF17632 Family of unknown function (DUF5513) BF31_5824 PF00877 NlpC/P60 family BF31_5831 PF12696 TraM recognition site of TraD and TraG BF31_5834 PF04956 TrbC/VIRB2 family BF31_5840 PF00437 Type II/IV secretion system protein BF31_5849 PF17631 Family of unknown function (DUF5512) BF31_5852 PF17362 Family of unknown function BF31_5857 PF08708 Primase C terminal 1 (PriCT-1) BF31_5858 PF13614 AAA domain BF31_5861 PF01520 N-acetylmuramoyl-L-alanine amidase BF31_5861 PF00395 S-layer homology domain BF31_5863 PF13276 HTH-like domain BF31_5863 PF00665 Integrase core domain BF31_5863 PF13333 Integrase core domain BF31_5867 PF01906 Putative heavy-metal-binding BF31_5868 PF02517 CPBP intramembrane metalloprotease BF31_5869 PF04463 Protein of unknown function (DUF523) BF31_5870 PF00440 Bacterial regulatory proteins, tetR family BF31_5871 PF01609 Transposase DDE domain BF31_5872 PF01609 Transposase DDE domain BF31_5873 PF01569 PAP2 superfamily BF31_5874 PF01569 PAP2 superfamily BF31_5876 PF05043 Mga helix-turn-helix domain BF31_5876 PF08280 M protein trans-acting positive regulator (MGA) HTH domain BF31_5880 PF09587 Bacterial capsule synthesis protein PGA_cap BF31_5881 PF14102 Capsule biosynthesis CapC BF31_5882 PF08245 Mur ligase middle domain BF31_5884 PF01022 Bacterial regulatory protein, arsR family BF31_5885 PF01609 Transposase DDE domain BF31_5887 PF10502 Signal peptidase, peptidase S26 BF31_5890 PF09385 Histidine kinase N terminal BF31_5891 PF00874 PRD domain BF31_5891 PF05043 Mga helix-turn-helix domain BF31_5891 PF08279 HTH domain BF31_5892 PF00874 PRD domain BF31_5892 PF05043 Mga helix-turn-helix domain BF31_5892 PF08279 HTH domain BF31_5895 PF01810 LysE type translocator BF31_590 PF11023 Zinc-ribbon containing domain BF31_591 PF01475 Ferric uptake regulator family BF31_592 PF00578 AhpC/TSA family BF31_593 PF07885 Ion channel BF31_596 PF00005 ABC transporter BF31_597 PF00202 Aminotransferase class-III BF31_598 PF01645 Conserved region in glutamate synthase BF31_598 PF01493 GXGXG motif BF31_598 PF04898 Glutamate synthase central domain BF31_598 PF00310 Glutamine amidotransferases class-II BF31_599 PF06081 Aromatic acid exporter family member 1 BF31_6 PF04542 Sigma-70 region 2 BF31_6 PF08281 Sigma-70, region 4 BF31_60 PF00440 Bacterial regulatory proteins, tetR family BF31_60 PF17934 Tetracyclin repressor-like, C-terminal domain BF31_600 PF00005 ABC transporter BF31_600 PF00664 ABC transporter transmembrane region BF31_601 PF04167 Protein of unknown function (DUF402) BF31_602 PF14182 YgaB-like protein BF31_603 PF04259 Small, acid-soluble spore protein, gamma-type BF31_605 PF00730 HhH-GPD superfamily base excision DNA repair protein BF31_605 PF14815 NUDIX domain BF31_606 PF04307 LexA-binding, inner membrane-associated putative hydrolase BF31_607 PF14043 WVELL protein BF31_608 PF08176 Small acid-soluble spore protein K family BF31_611 PF02631 RecX family BF31_612 PF01370 NAD dependent epimerase/dehydratase family BF31_612 PF08338 Domain of unknown function (DUF1731) BF31_613 PF01979 Amidohydrolase family BF31_616 PF04101 Glycosyltransferase family 28 C-terminal domain BF31_616 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase BF31_617 PF04055 Radical SAM superfamily BF31_618 PF01228 Glycine radical BF31_618 PF02901 Pyruvate formate lyase-like BF31_619 PF00535 Glycosyl transferase family 2 BF31_62 PF12787 EcsC protein family BF31_620 PF00551 Formyl transferase BF31_620 PF01370 NAD dependent epimerase/dehydratase family BF31_620 PF02911 Formyl transferase, C-terminal domain BF31_621 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BF31_621 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BF31_621 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BF31_622 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BF31_622 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BF31_622 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BF31_623 PF00535 Glycosyl transferase family 2 BF31_626 PF00144 Beta-lactamase BF31_627 PF00367 phosphotransferase system, EIIB BF31_627 PF02378 Phosphotransferase system, EIIC BF31_628 PF04960 Glutaminase BF31_63 PF05975 Bacterial ABC transporter protein EcsB BF31_633 PF01546 Peptidase family M20/M25/M40 BF31_633 PF07687 Peptidase dimerisation domain BF31_634 PF00324 Amino acid permease BF31_636 PF13426 PAS domain BF31_636 PF02954 Bacterial regulatory protein, Fis family BF31_636 PF00158 Sigma-54 interaction domain BF31_638 PF01416 tRNA pseudouridine synthase BF31_64 PF00005 ABC transporter BF31_65 PF01230 HIT domain BF31_66 PF12732 YtxH-like protein BF31_67 PF01047 MarR family BF31_685 PF01695 IstB-like ATP binding protein BF31_685 PF07319 Primosomal protein DnaI N-terminus BF31_692 PF01381 Helix-turn-helix BF31_696 PF14659 Phage integrase, N-terminal SAM-like domain BF31_696 PF00589 Phage integrase family BF31_697 PF01938 TRAM domain BF31_697 PF05958 tRNA (Uracil-5-)-methyltransferase BF31_698 PF00730 HhH-GPD superfamily base excision DNA repair protein BF31_700 PF01522 Polysaccharide deacetylase BF31_701 PF05683 Fumarase C-terminus BF31_701 PF05681 Fumarate hydratase (Fumerase) BF31_703 PF04055 Radical SAM superfamily BF31_703 PF08756 YfkB-like domain BF31_704 PF14167 YfkD-like protein BF31_705 PF01699 Sodium/calcium exchanger protein BF31_706 PF16242 Pyridoxamine 5'-phosphate oxidase like BF31_709 PF09335 SNARE associated Golgi protein BF31_71 PF13538 UvrD-like helicase C-terminal domain BF31_711 PF10502 Signal peptidase, peptidase S26 BF31_712 PF10502 Signal peptidase, peptidase S26 BF31_714 PF00892 EamA-like transporter family BF31_716 PF03631 Virulence factor BrkB BF31_718 PF01451 Low molecular weight phosphotyrosine protein phosphatase BF31_719 PF06569 Protein of unknown function (DUF1128) BF31_720 PF00690 Cation transporter/ATPase, N-terminus BF31_720 PF00689 Cation transporting ATPase, C-terminus BF31_721 PF05816 Toxic anion resistance protein (TelA) BF31_722 PF14266 Putative component of 'biosynthetic module' BF31_723 PF03741 Integral membrane protein TerC family BF31_724 PF02342 TerD domain BF31_725 PF02342 TerD domain BF31_726 PF02342 TerD domain BF31_727 PF00480 ROK family BF31_729 PF03129 Anticodon binding domain BF31_729 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BF31_729 PF09180 Prolyl-tRNA synthetase, C-terminal BF31_73 PF07690 Major Facilitator Superfamily BF31_732 PF11700 Vacuole effluxer Atg22 like BF31_736 PF00440 Bacterial regulatory proteins, tetR family BF31_736 PF08360 QacR-like protein, C-terminal region BF31_74 PF07690 Major Facilitator Superfamily BF31_740 PF00704 Glycosyl hydrolases family 18 BF31_740 PF00041 Fibronectin type III domain BF31_741 PF12848 ABC transporter BF31_741 PF00005 ABC transporter BF31_742 PF00005 ABC transporter BF31_744 PF00528 Binding-protein-dependent transport system inner membrane component BF31_745 PF01910 Thiamine-binding protein BF31_746 PF00672 HAMP domain BF31_746 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF31_747 PF03605 Anaerobic c4-dicarboxylate membrane transporter BF31_748 PF02581 Thiamine monophosphate synthase BF31_749 PF02110 Hydroxyethylthiazole kinase family BF31_750 PF01131 DNA topoisomerase BF31_750 PF01751 Toprim domain BF31_751 PF01061 ABC-2 type transporter BF31_752 PF03372 Endonuclease/Exonuclease/phosphatase family BF31_753 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BF31_753 PF00367 phosphotransferase system, EIIB BF31_753 PF02378 Phosphotransferase system, EIIC BF31_754 PF16657 Maltogenic Amylase, C-terminal domain BF31_754 PF00128 Alpha amylase, catalytic domain BF31_755 PF12729 Four helix bundle sensory module for signal transduction BF31_755 PF00672 HAMP domain BF31_755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF31_756 PF00672 HAMP domain BF31_756 PF12729 Four helix bundle sensory module for signal transduction BF31_756 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF31_757 PF00005 ABC transporter BF31_758 PF00497 Bacterial extracellular solute-binding proteins, family 3 BF31_759 PF00528 Binding-protein-dependent transport system inner membrane component BF31_761 PF00355 Rieske [2Fe-2S] domain BF31_761 PF01266 FAD dependent oxidoreductase BF31_762 PF07690 Major Facilitator Superfamily BF31_763 PF10127 RNA repair pathway DNA polymerase beta family BF31_767 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_767 PF13426 PAS domain BF31_767 PF00989 PAS fold BF31_767 PF13188 PAS domain BF31_767 PF00512 His Kinase A (phospho-acceptor) domain BF31_773 PF12728 Helix-turn-helix domain BF31_775 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF31_776 PF01497 Periplasmic binding protein BF31_777 PF01032 FecCD transport family BF31_778 PF01032 FecCD transport family BF31_779 PF00596 Class II Aldolase and Adducin N-terminal domain BF31_781 PF01636 Phosphotransferase enzyme family BF31_782 PF00578 AhpC/TSA family BF31_783 PF13192 Thioredoxin domain BF31_783 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF31_785 PF01546 Peptidase family M20/M25/M40 BF31_785 PF07687 Peptidase dimerisation domain BF31_788 PF13378 Enolase C-terminal domain-like BF31_788 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BF31_79 PF08281 Sigma-70, region 4 BF31_79 PF04542 Sigma-70 region 2 BF31_791 PF07308 Protein of unknown function (DUF1456) BF31_793 PF01207 Dihydrouridine synthase (Dus) BF31_794 PF02475 Met-10+ like-protein BF31_794 PF01938 TRAM domain BF31_794 PF05958 tRNA (Uracil-5-)-methyltransferase BF31_795 PF07670 Nucleoside recognition BF31_795 PF07662 Na+ dependent nucleoside transporter C-terminus BF31_795 PF01773 Na+ dependent nucleoside transporter N-terminus BF31_798 PF02073 Thermophilic metalloprotease (M29) BF31_799 PF00893 Small Multidrug Resistance protein BF31_8 PF01966 HD domain BF31_800 PF00171 Aldehyde dehydrogenase family BF31_801 PF00158 Sigma-54 interaction domain BF31_802 PF00202 Aminotransferase class-III BF31_803 PF13419 Haloacid dehalogenase-like hydrolase BF31_804 PF00781 Diacylglycerol kinase catalytic domain BF31_805 PF02637 GatB domain BF31_805 PF02934 GatB/GatE catalytic domain BF31_806 PF01425 Amidase BF31_807 PF02686 Glu-tRNAGln amidotransferase C subunit BF31_808 PF05360 yiaA/B two helix domain BF31_809 PF01047 MarR family BF31_810 PF02374 Anion-transporting ATPase BF31_810 PF17886 HSP20-like domain found in ArsA BF31_811 PF17886 HSP20-like domain found in ArsA BF31_811 PF02374 Anion-transporting ATPase BF31_814 PF03180 NLPA lipoprotein BF31_815 PF00528 Binding-protein-dependent transport system inner membrane component BF31_816 PF00005 ABC transporter BF31_816 PF09383 NIL domain BF31_817 PF00857 Isochorismatase family BF31_819 PF00171 Aldehyde dehydrogenase family BF31_82 PF01266 FAD dependent oxidoreductase BF31_82 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BF31_820 PF01925 Sulfite exporter TauE/SafE BF31_821 PF07537 CamS sex pheromone cAM373 precursor BF31_822 PF12826 Helix-hairpin-helix motif BF31_822 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BF31_822 PF03120 NAD-dependent DNA ligase OB-fold domain BF31_822 PF01653 NAD-dependent DNA ligase adenylation domain BF31_822 PF00533 BRCA1 C Terminus (BRCT) domain BF31_825 PF01884 PcrB family BF31_829 PF02843 Phosphoribosylglycinamide synthetase, C domain BF31_829 PF02844 Phosphoribosylglycinamide synthetase, N domain BF31_829 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BF31_83 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BF31_83 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BF31_830 PF02142 MGS-like domain BF31_830 PF01808 AICARFT/IMPCHase bienzyme BF31_831 PF00551 Formyl transferase BF31_832 PF02769 AIR synthase related protein, C-terminal domain BF31_832 PF00586 AIR synthase related protein, N-terminal domain BF31_833 PF00156 Phosphoribosyl transferase domain BF31_834 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BF31_834 PF00586 AIR synthase related protein, N-terminal domain BF31_834 PF02769 AIR synthase related protein, C-terminal domain BF31_836 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase BF31_837 PF01259 SAICAR synthetase BF31_838 PF00206 Lyase BF31_838 PF10397 Adenylosuccinate lyase C-terminus BF31_839 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BF31_839 PF02222 ATP-grasp domain BF31_84 PF00230 Major intrinsic protein BF31_840 PF00731 AIR carboxylase BF31_845 PF00486 Transcriptional regulatory protein, C terminal BF31_845 PF00072 Response regulator receiver domain BF31_846 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_846 PF00512 His Kinase A (phospho-acceptor) domain BF31_847 PF00005 ABC transporter BF31_849 PF02673 Bacitracin resistance protein BacA BF31_85 PF04309 Glycerol-3-phosphate responsive antiterminator BF31_855 PF00535 Glycosyl transferase family 2 BF31_861 PF08241 Methyltransferase domain BF31_864 PF14307 Glycosyltransferase WbsX BF31_864 PF05045 Rhamnan synthesis protein F BF31_869 PF00989 PAS fold BF31_869 PF16736 Single Cache-like BF31_869 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF31_869 PF00512 His Kinase A (phospho-acceptor) domain BF31_870 PF00072 Response regulator receiver domain BF31_870 PF00486 Transcriptional regulatory protein, C terminal BF31_871 PF00860 Permease family BF31_872 PF00958 GMP synthase C terminal domain BF31_872 PF02540 NAD synthase BF31_872 PF00117 Glutamine amidotransferase class-I BF31_873 PF00118 TCP-1/cpn60 chaperonin family BF31_874 PF00166 Chaperonin 10 Kd subunit BF31_875 PF02517 CPBP intramembrane metalloprotease BF31_877 PF02629 CoA binding domain BF31_877 PF06971 Putative DNA-binding protein N-terminus BF31_878 PF16326 ABC transporter C-terminal domain BF31_878 PF00005 ABC transporter BF31_878 PF12848 ABC transporter BF31_879 PF00814 Glycoprotease family BF31_880 PF00583 Acetyltransferase (GNAT) family BF31_881 PF00814 Glycoprotease family BF31_882 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BF31_89 PF08386 TAP-like protein BF31_89 PF00561 alpha/beta hydrolase fold BF31_9 PF00149 Calcineurin-like phosphoesterase BF31_900 PF17283 SprT-like zinc ribbon domain BF31_900 PF10263 SprT-like family BF31_901 PF16921 Tex protein YqgF-like domain BF31_901 PF09371 Tex-like protein N-terminal domain BF31_901 PF17674 HHH domain BF31_901 PF00575 S1 RNA binding domain BF31_902 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system BF31_903 PF01402 Ribbon-helix-helix protein, copG family BF31_904 PF01168 Alanine racemase, N-terminal domain BF31_904 PF00842 Alanine racemase, C-terminal domain BF31_906 PF01648 4'-phosphopantetheinyl transferase superfamily BF31_907 PF03851 UV-endonuclease UvdE BF31_908 PF01694 Rhomboid family BF31_909 PF00270 DEAD/DEAH box helicase BF31_909 PF00271 Helicase conserved C-terminal domain BF31_91 PF18801 response regulator aspartate phosphatase H, N terminal BF31_910 PF08245 Mur ligase middle domain BF31_910 PF02875 Mur ligase family, glutamate ligase domain BF31_910 PF01225 Mur ligase family, catalytic domain BF31_911 PF01820 D-ala D-ala ligase N-terminus BF31_911 PF07478 D-ala D-ala ligase C-terminus BF31_912 PF07478 D-ala D-ala ligase C-terminus BF31_912 PF01820 D-ala D-ala ligase N-terminus BF31_913 PF07690 Major Facilitator Superfamily BF31_915 PF01557 Fumarylacetoacetate (FAA) hydrolase family BF31_916 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF31_92 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF31_924 PF00005 ABC transporter BF31_924 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF31_925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF31_925 PF00005 ABC transporter BF31_927 PF00528 Binding-protein-dependent transport system inner membrane component BF31_928 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF31_93 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF31_931 PF12848 ABC transporter BF31_931 PF16326 ABC transporter C-terminal domain BF31_931 PF00005 ABC transporter BF31_935 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) BF31_936 PF01026 TatD related DNase BF31_939 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF31_939 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF31_94 PF07690 Major Facilitator Superfamily BF31_941 PF00356 Bacterial regulatory proteins, lacI family BF31_941 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BF31_943 PF01553 Acyltransferase BF31_945 PF14142 YrzO-like protein BF31_946 PF00892 EamA-like transporter family BF31_947 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF31_947 PF03466 LysR substrate binding domain BF31_95 PF00440 Bacterial regulatory proteins, tetR family BF31_950 PF12728 Helix-turn-helix domain BF31_950 PF12727 PBP superfamily domain BF31_953 PF00528 Binding-protein-dependent transport system inner membrane component BF31_954 PF06800 Sugar transport protein BF31_955 PF04973 Nicotinamide mononucleotide transporter BF31_956 PF14748 Pyrroline-5-carboxylate reductase dimerisation BF31_956 PF03807 NADP oxidoreductase coenzyme F420-dependent BF31_957 PF00248 Aldo/keto reductase family BF31_958 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF31_959 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF31_96 PF01966 HD domain BF31_96 PF01336 OB-fold nucleic acid binding domain BF31_962 PF12833 Helix-turn-helix domain BF31_964 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF31_965 PF00005 ABC transporter BF31_965 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF31_966 PF00005 ABC transporter BF31_966 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF31_967 PF00528 Binding-protein-dependent transport system inner membrane component BF31_967 PF12911 N-terminal TM domain of oligopeptide transport permease C BF31_968 PF00528 Binding-protein-dependent transport system inner membrane component BF31_971 PF07690 Major Facilitator Superfamily BF31_973 PF07690 Major Facilitator Superfamily BF31_974 PF01565 FAD binding domain BF31_977 PF03180 NLPA lipoprotein BF31_978 PF09383 NIL domain BF31_978 PF00005 ABC transporter BF31_979 PF00528 Binding-protein-dependent transport system inner membrane component BF31_98 PF01385 Probable transposase BF31_98 PF07282 Putative transposase DNA-binding domain BF31_98 PF12323 Helix-turn-helix domain BF31_988 PF07676 WD40-like Beta Propeller Repeat BF31_988 PF00326 Prolyl oligopeptidase family BF31_989 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BF31_989 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BF31_99 PF13514 AAA domain BF31_990 PF02447 GntP family permease BF31_991 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BF31_991 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BF31_992 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BF31_992 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BF31_993 PF07729 FCD domain BF31_993 PF00392 Bacterial regulatory proteins, gntR family BF31_994 PF00561 alpha/beta hydrolase fold BF31_995 PF01380 SIS domain BF31_996 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BF31_996 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BF31_996 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BF31_996 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BF31_997 PF07949 YbbR-like protein BF31_998 PF02457 DisA bacterial checkpoint controller nucleotide-binding BF31_999 PF00491 Arginase family