BASH2_00003	SM01005	Alanine racemase, C-terminal domain
BASH2_00008	SM00487	DEAD-like helicases superfamily
BASH2_00008	SM00490	helicase superfamily c-terminal domain
BASH2_00021	SM00382	ATPases associated with a variety of cellular activities
BASH2_00022	SM00382	ATPases associated with a variety of cellular activities
BASH2_00027	SM00382	ATPases associated with a variety of cellular activities
BASH2_00037	SM00354	helix_turn _helix lactose operon repressor
BASH2_00039	SM00563	Phosphate acyltransferases
BASH2_00059	SM00342	helix_turn_helix, arabinose operon control protein
BASH2_00062	SM00382	ATPases associated with a variety of cellular activities
BASH2_00063	SM00382	ATPases associated with a variety of cellular activities
BASH2_00073	SM00829	Enoylreductase
BASH2_00075	SM00382	ATPases associated with a variety of cellular activities
BASH2_00075	SM00930	BASH2_00075
BASH2_00086	SM01350	BASH2_00086
BASH2_00090	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BASH2_00090	SM00895	BASH2_00090
BASH2_00102	SM01251	BASH2_00102
BASH2_00105	SM00646	BASH2_00105
BASH2_00111	SM00382	ATPases associated with a variety of cellular activities
BASH2_00112	SM00382	ATPases associated with a variety of cellular activities
BASH2_00114	SM00662	RNA polymerases D
BASH2_00118	SM00316	Ribosomal protein S1-like RNA-binding domain
BASH2_00130	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
BASH2_00131	SM01374	BASH2_00131
BASH2_00135	SM00322	K homology RNA-binding domain
BASH2_00138	SM01382	BASH2_00138
BASH2_00138	SM01383	BASH2_00138
BASH2_00142	SM01403	BASH2_00142
BASH2_00144	SM00838	Elongation factor G C-terminus
BASH2_00144	SM00889	Elongation factor G, domain IV
BASH2_00148	SM00663	RNA polymerase I subunit A N-terminus
BASH2_00154	SM00649	Ribosomal protein L11/L12
BASH2_00155	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
BASH2_00157	SM00421	helix_turn_helix, Lux Regulon
BASH2_00159	SM00967	RNA 2'-O ribose methyltransferase substrate binding
BASH2_00160	SM00535	Ribonuclease III family
BASH2_00161	SM00840	BASH2_00161
BASH2_00166	SM00670	Large family of predicted nucleotide-binding domains
BASH2_00168	SM00382	ATPases associated with a variety of cellular activities
BASH2_00169	SM00382	ATPases associated with a variety of cellular activities
BASH2_00169	SM01086	C-terminal, D2-small domain, of ClpB protein
BASH2_00176	SM00530	Helix-turn-helix XRE-family like proteins 
BASH2_00178	SM00905	Dihydroneopterin aldolase
BASH2_00186	SM00382	ATPases associated with a variety of cellular activities
BASH2_00188	SM00977	TilS substrate C-terminal domain
BASH2_00189	SM00331	Sigma factor PP2C-like phosphatases
BASH2_00189	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
BASH2_00190	SM00316	Ribosomal protein S1-like RNA-binding domain
BASH2_00194	SM00363	S4 RNA-binding domain
BASH2_00197	SM00966	SpoVT / AbrB like domain 
BASH2_00198	SM00487	DEAD-like helicases superfamily
BASH2_00198	SM00490	helicase superfamily c-terminal domain
BASH2_00198	SM00982	BASH2_00198
BASH2_00198	SM01058	CarD-like/TRCF domain
BASH2_00201	SM01400	BASH2_00201
BASH2_00210	SM00650	Ribosomal RNA adenine dimethylases
BASH2_00211	SM00493	BASH2_00211
BASH2_00214	SM00966	SpoVT / AbrB like domain 
BASH2_00227	SM00493	BASH2_00227
BASH2_00229	SM00382	ATPases associated with a variety of cellular activities
BASH2_00238	SM00936	Penicillin-binding protein 5, C-terminal domain 
BASH2_00239	SM00116	Domain in cystathionine beta-synthase and other proteins.
BASH2_00239	SM01240	BASH2_00239
BASH2_00242	SM00434	DNA Topoisomerase IV
BASH2_00243	SM00387	Histidine kinase-like ATPases
BASH2_00243	SM00433	TopoisomeraseII
BASH2_00246	SM00480	DNA polymerase III beta subunit
BASH2_00247	SM00382	ATPases associated with a variety of cellular activities
BASH2_00247	SM00760	Bacterial dnaA protein helix-turn-helix domain
BASH2_00251	SM00393	Putative single-stranded nucleic acids-binding domain
BASH2_00251	SM01245	BASH2_00251
BASH2_00253	SM01228	BASH2_00253
BASH2_00255	SM00470	ParB-like nuclease domain
BASH2_00257	SM00470	ParB-like nuclease domain
BASH2_00266	SM00267	diguanylate cyclase
BASH2_00269	SM00788	Adenylosuccinate synthetase
BASH2_00270	SM00448	cheY-homologous receiver domain
BASH2_00270	SM00862	Transcriptional regulatory protein, C terminal
BASH2_00271	SM00091	PAS domain
BASH2_00271	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BASH2_00271	SM00387	Histidine kinase-like ATPases
BASH2_00271	SM00388	His Kinase A (phosphoacceptor) domain
BASH2_00274	SM00849	Metallo-beta-lactamase superfamily
BASH2_00275	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BASH2_00281	SM01240	BASH2_00281
BASH2_00283	SM00487	DEAD-like helicases superfamily
BASH2_00283	SM00490	helicase superfamily c-terminal domain
BASH2_00294	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BASH2_00294	SM00387	Histidine kinase-like ATPases
BASH2_00295	SM00448	cheY-homologous receiver domain
BASH2_00295	SM00850	LytTr DNA-binding domain
BASH2_00309	SM00382	ATPases associated with a variety of cellular activities
BASH2_00314	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BASH2_00321	SM00448	cheY-homologous receiver domain
BASH2_00321	SM00850	LytTr DNA-binding domain
BASH2_00324	SM00267	diguanylate cyclase
BASH2_00326	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BASH2_00328	SM00421	helix_turn_helix, Lux Regulon
BASH2_00328	SM00448	cheY-homologous receiver domain
BASH2_00330	SM00100	Cyclic nucleotide-monophosphate binding domain
BASH2_00337	SM00354	helix_turn _helix lactose operon repressor
BASH2_00339	SM00382	ATPases associated with a variety of cellular activities
BASH2_00341	SM00986	Uracil DNA glycosylase superfamily
BASH2_00341	SM00987	UreE urease accessory protein, C-terminal domain 
BASH2_00351	SM00936	Penicillin-binding protein 5, C-terminal domain 
BASH2_00362	SM00382	ATPases associated with a variety of cellular activities
BASH2_00364	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BASH2_00371	SM00422	helix_turn_helix, mercury resistance
BASH2_00380	SM00836	DALR anticodon binding domain
BASH2_00380	SM01016	Arginyl tRNA synthetase N terminal dom
BASH2_00391	SM00382	ATPases associated with a variety of cellular activities
BASH2_00393	SM00387	Histidine kinase-like ATPases
BASH2_00394	SM00421	helix_turn_helix, Lux Regulon
BASH2_00394	SM00448	cheY-homologous receiver domain
BASH2_00395	SM00530	Helix-turn-helix XRE-family like proteins 
BASH2_00398	SM00052	Putative diguanylate phosphodiesterase
BASH2_00398	SM00267	diguanylate cyclase
BASH2_00400	SM00155	Phospholipase D. Active site motifs.
BASH2_00411	SM00448	cheY-homologous receiver domain
BASH2_00415	SM00357	Cold shock protein domain
BASH2_00415	SM00382	ATPases associated with a variety of cellular activities
BASH2_00415	SM00959	Rho termination factor, N-terminal domain
BASH2_00417	SM00937	BASH2_00417
BASH2_00424	SM00903	Flavin reductase like domain
BASH2_00427	SM00226	Low molecular weight phosphatase family
BASH2_00441	SM00382	ATPases associated with a variety of cellular activities
BASH2_00445	SM00052	Putative diguanylate phosphodiesterase
BASH2_00445	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BASH2_00445	SM00091	PAS domain
BASH2_00445	SM00267	diguanylate cyclase
BASH2_00462	SM00850	LytTr DNA-binding domain
BASH2_00463	SM00382	ATPases associated with a variety of cellular activities
BASH2_00478	SM00984	UDP binding domain
BASH2_00480	SM00382	ATPases associated with a variety of cellular activities
BASH2_00481	SM00287	Bacterial SH3 domain homologues
BASH2_00486	SM00448	cheY-homologous receiver domain
BASH2_00486	SM00862	Transcriptional regulatory protein, C terminal
BASH2_00487	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BASH2_00487	SM00387	Histidine kinase-like ATPases
BASH2_00487	SM00388	His Kinase A (phosphoacceptor) domain
BASH2_00493	SM00382	ATPases associated with a variety of cellular activities
BASH2_00503	SM00487	DEAD-like helicases superfamily
BASH2_00503	SM00490	helicase superfamily c-terminal domain
BASH2_00509	SM00287	Bacterial SH3 domain homologues
BASH2_00516	SM00287	Bacterial SH3 domain homologues
BASH2_00550	SM00754	A domain in the BMP inhibitor chordin and in microbial proteins.
BASH2_00551	SM00382	ATPases associated with a variety of cellular activities
BASH2_00554	SM00984	UDP binding domain
BASH2_00562	SM00487	DEAD-like helicases superfamily
BASH2_00562	SM00490	helicase superfamily c-terminal domain
BASH2_00564	SM00357	Cold shock protein domain
BASH2_00566	SM00957	SecA DEAD-like domain
BASH2_00566	SM00958	SecA preprotein cross-linking domain
BASH2_00567	SM00937	BASH2_00567
BASH2_00569	SM00382	ATPases associated with a variety of cellular activities
BASH2_00571	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BASH2_00571	SM00245	tail specific protease
BASH2_00573	SM00382	ATPases associated with a variety of cellular activities
BASH2_00575	SM00382	ATPases associated with a variety of cellular activities
BASH2_00577	SM00422	helix_turn_helix, mercury resistance
BASH2_00580	SM00530	Helix-turn-helix XRE-family like proteins 
BASH2_00585	SM00422	helix_turn_helix, mercury resistance
BASH2_00589	SM00487	DEAD-like helicases superfamily
BASH2_00589	SM00490	helicase superfamily c-terminal domain
BASH2_00597	SM00028	Tetratricopeptide repeats
BASH2_00617	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BASH2_00622	SM01192	BASH2_00622
BASH2_00622	SM01193	BASH2_00622
BASH2_00629	SM00507	HNH nucleases
BASH2_00647	SM00316	Ribosomal protein S1-like RNA-binding domain
BASH2_00647	SM00357	Cold shock protein domain
BASH2_00647	SM00955	BASH2_00647
BASH2_00650	SM00448	cheY-homologous receiver domain
BASH2_00650	SM00862	Transcriptional regulatory protein, C terminal
BASH2_00654	SM00382	ATPases associated with a variety of cellular activities
BASH2_00665	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BASH2_00666	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
BASH2_00668	SM00363	S4 RNA-binding domain
BASH2_00675	SM01276	BASH2_00675
BASH2_00695	SM00347	helix_turn_helix multiple antibiotic resistance protein
BASH2_00699	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BASH2_00699	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BASH2_00703	SM00387	Histidine kinase-like ATPases
BASH2_00703	SM00388	His Kinase A (phosphoacceptor) domain
BASH2_00704	SM00448	cheY-homologous receiver domain
BASH2_00704	SM00862	Transcriptional regulatory protein, C terminal
BASH2_00710	SM00530	Helix-turn-helix XRE-family like proteins 
BASH2_00724	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BASH2_00724	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BASH2_00735	SM00849	Metallo-beta-lactamase superfamily
BASH2_00753	SM00493	BASH2_00753
BASH2_00756	SM00382	ATPases associated with a variety of cellular activities
BASH2_00756	SM00930	BASH2_00756
BASH2_00761	SM00382	ATPases associated with a variety of cellular activities
BASH2_00772	SM00729	Elongator protein 3, MiaB family, Radical SAM
BASH2_00774	SM00855	Phosphoglycerate mutase family
BASH2_00777	SM00422	helix_turn_helix, mercury resistance
BASH2_00785	SM00420	helix_turn_helix, Deoxyribose operon repressor
BASH2_00799	SM00860	SMI1 / KNR4 family
BASH2_00804	SM00382	ATPases associated with a variety of cellular activities
BASH2_00815	SM00871	Bacterial transcription activator, effector binding domain
BASH2_00835	SM00479	BASH2_00835
BASH2_00836	SM01298	BASH2_00836
BASH2_00843	SM00344	helix_turn_helix ASNC type
BASH2_00845	SM00316	Ribosomal protein S1-like RNA-binding domain
BASH2_00854	SM00642	Alpha-amylase domain
BASH2_00862	SM00357	Cold shock protein domain
BASH2_00870	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BASH2_00871	SM00448	cheY-homologous receiver domain
BASH2_00871	SM00862	Transcriptional regulatory protein, C terminal
BASH2_00872	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BASH2_00872	SM00387	Histidine kinase-like ATPases
BASH2_00872	SM00388	His Kinase A (phosphoacceptor) domain
BASH2_00880	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BASH2_00880	SM00866	BASH2_00880
BASH2_00885	SM00382	ATPases associated with a variety of cellular activities
BASH2_00890	SM00387	Histidine kinase-like ATPases
BASH2_00891	SM00448	cheY-homologous receiver domain
BASH2_00891	SM00862	Transcriptional regulatory protein, C terminal
BASH2_00892	SM00342	helix_turn_helix, arabinose operon control protein
BASH2_00892	SM00871	Bacterial transcription activator, effector binding domain
BASH2_00893	SM00382	ATPases associated with a variety of cellular activities
BASH2_00902	SM00046	Diacylglycerol kinase catalytic domain (presumed)
BASH2_00908	SM00448	cheY-homologous receiver domain
BASH2_00908	SM00862	Transcriptional regulatory protein, C terminal
BASH2_00909	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BASH2_00909	SM00387	Histidine kinase-like ATPases
BASH2_00909	SM00388	His Kinase A (phosphoacceptor) domain
BASH2_00911	SM00899	BASH2_00911
BASH2_00921	SM00894	Excalibur calcium-binding domain
BASH2_00926	SM00947	Carbonic anhydrase
BASH2_00927	SM01234	BASH2_00927
BASH2_00937	SM00382	ATPases associated with a variety of cellular activities
BASH2_00944	SM00387	Histidine kinase-like ATPases
BASH2_00944	SM00388	His Kinase A (phosphoacceptor) domain
BASH2_00945	SM00387	Histidine kinase-like ATPases
BASH2_00956	SM00852	Probable molybdopterin binding domain
BASH2_00959	SM00014	Acid phosphatase homologues
BASH2_00968	SM00382	ATPases associated with a variety of cellular activities
BASH2_00970	SM00729	Elongator protein 3, MiaB family, Radical SAM
BASH2_00974	SM00382	ATPases associated with a variety of cellular activities
BASH2_00993	SM00450	Rhodanese Homology Domain
BASH2_00997	SM00729	Elongator protein 3, MiaB family, Radical SAM
BASH2_01001	SM00852	Probable molybdopterin binding domain
BASH2_01008	SM01058	CarD-like/TRCF domain
BASH2_01013	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BASH2_01017	SM00363	S4 RNA-binding domain
BASH2_01018	SM00420	helix_turn_helix, Deoxyribose operon repressor
BASH2_01022	SM00642	Alpha-amylase domain
BASH2_01026	SM00849	Metallo-beta-lactamase superfamily
BASH2_01034	SM00843	BASH2_01034
BASH2_01044	SM00354	helix_turn _helix lactose operon repressor
BASH2_01051	SM00248	ankyrin repeats
BASH2_01052	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BASH2_01052	SM00387	Histidine kinase-like ATPases
BASH2_01052	SM00388	His Kinase A (phosphoacceptor) domain
BASH2_01053	SM00448	cheY-homologous receiver domain
BASH2_01053	SM00862	Transcriptional regulatory protein, C terminal
BASH2_01056	SM00116	Domain in cystathionine beta-synthase and other proteins.
BASH2_01062	SM00363	S4 RNA-binding domain
BASH2_01065	SM00363	S4 RNA-binding domain
BASH2_01065	SM01390	BASH2_01065
BASH2_01074	SM00981	BASH2_01074
BASH2_01099	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
BASH2_01099	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
BASH2_01101	SM00530	Helix-turn-helix XRE-family like proteins 
BASH2_01111	SM00849	Metallo-beta-lactamase superfamily
BASH2_01113	SM00116	Domain in cystathionine beta-synthase and other proteins.
BASH2_01121	SM00481	DNA polymerase alpha chain like domain
BASH2_01122	SM00919	Malic enzyme, NAD binding domain
BASH2_01122	SM01274	BASH2_01122
BASH2_01123	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BASH2_01132	SM01329	BASH2_01132
BASH2_01136	SM00448	cheY-homologous receiver domain
BASH2_01136	SM00862	Transcriptional regulatory protein, C terminal
BASH2_01137	SM00091	PAS domain
BASH2_01137	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BASH2_01137	SM00387	Histidine kinase-like ATPases
BASH2_01137	SM00388	His Kinase A (phosphoacceptor) domain
BASH2_01138	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
BASH2_01138	SM00474	3'-5' exonuclease
BASH2_01138	SM00475	5'-3' exonuclease
BASH2_01138	SM00482	DNA polymerase A domain
BASH2_01139	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
BASH2_01139	SM01232	BASH2_01139
BASH2_01142	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BASH2_01146	SM00382	ATPases associated with a variety of cellular activities
BASH2_01148	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BASH2_01163	SM00967	RNA 2'-O ribose methyltransferase substrate binding
BASH2_01165	SM00873	B3/4 domain
BASH2_01165	SM00874	tRNA synthetase B5 domain
BASH2_01165	SM00896	Ferredoxin-fold anticodon binding domain
BASH2_01172	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BASH2_01172	SM00481	DNA polymerase alpha chain like domain
BASH2_01172	SM00483	DNA polymerase X family
BASH2_01173	SM00463	Small MutS-related domain
BASH2_01173	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
BASH2_01173	SM00534	ATPase domain of DNA mismatch repair MUTS family
BASH2_01175	SM00363	S4 RNA-binding domain
BASH2_01177	SM00725	NEAr Transporter domain
BASH2_01178	SM00725	NEAr Transporter domain
BASH2_01179	SM00725	NEAr Transporter domain
BASH2_01182	SM00382	ATPases associated with a variety of cellular activities
BASH2_01186	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
BASH2_01189	SM00448	cheY-homologous receiver domain
BASH2_01189	SM00862	Transcriptional regulatory protein, C terminal
BASH2_01190	SM00387	Histidine kinase-like ATPases
BASH2_01190	SM00388	His Kinase A (phosphoacceptor) domain
BASH2_01191	SM00382	ATPases associated with a variety of cellular activities
BASH2_01204	SM00893	Electron transfer flavoprotein domain
BASH2_01205	SM00893	Electron transfer flavoprotein domain
BASH2_01207	SM00465	GIY-YIG type nucleases (URI domain)
BASH2_01219	SM00382	ATPases associated with a variety of cellular activities
BASH2_01224	SM00530	Helix-turn-helix XRE-family like proteins 
BASH2_01228	SM00342	helix_turn_helix, arabinose operon control protein
BASH2_01228	SM00448	cheY-homologous receiver domain
BASH2_01230	SM00382	ATPases associated with a variety of cellular activities
BASH2_01231	SM00382	ATPases associated with a variety of cellular activities
BASH2_01239	SM00421	helix_turn_helix, Lux Regulon
BASH2_01246	SM00909	Sporulation and spore germination
BASH2_01257	SM00382	ATPases associated with a variety of cellular activities
BASH2_01257	SM00994	ClpX C4-type zinc finger
BASH2_01257	SM01086	C-terminal, D2-small domain, of ClpB protein
BASH2_01258	SM00382	ATPases associated with a variety of cellular activities
BASH2_01259	SM00382	ATPases associated with a variety of cellular activities
BASH2_01259	SM00464	Found in ATP-dependent protease La (LON)
BASH2_01262	SM00347	helix_turn_helix multiple antibiotic resistance protein
BASH2_01267	SM01004	Delta-aminolevulinic acid dehydratase
BASH2_01269	SM00257	Lysin motif
BASH2_01288	SM01317	BASH2_01288
BASH2_01290	SM00448	cheY-homologous receiver domain
BASH2_01290	SM00862	Transcriptional regulatory protein, C terminal
BASH2_01291	SM00387	Histidine kinase-like ATPases
BASH2_01292	SM00382	ATPases associated with a variety of cellular activities
BASH2_01302	SM00257	Lysin motif
BASH2_01305	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BASH2_01310	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BASH2_01311	SM00382	ATPases associated with a variety of cellular activities
BASH2_01315	SM01323	BASH2_01315
BASH2_01324	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BASH2_01324	SM00954	Region found in RelA / SpoT proteins
BASH2_01331	SM00382	ATPases associated with a variety of cellular activities
BASH2_01335	SM00028	Tetratricopeptide repeats
BASH2_01343	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BASH2_01345	SM00732	Likely ribonuclease with RNase H fold.
BASH2_01364	SM00382	ATPases associated with a variety of cellular activities
BASH2_01369	SM00530	Helix-turn-helix XRE-family like proteins 
BASH2_01379	SM00855	Phosphoglycerate mutase family
BASH2_01384	SM00098	Alkaline phosphatase homologues
BASH2_01386	SM00954	Region found in RelA / SpoT proteins
BASH2_01398	SM01103	BASH2_01398
BASH2_01400	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BASH2_01404	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BASH2_01407	SM00849	Metallo-beta-lactamase superfamily
BASH2_01413	SM00838	Elongation factor G C-terminus
BASH2_01415	SM00729	Elongator protein 3, MiaB family, Radical SAM
BASH2_01419	SM00271	DnaJ molecular chaperone homology domain
BASH2_01422	SM00729	Elongator protein 3, MiaB family, Radical SAM
BASH2_01428	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BASH2_01435	SM00116	Domain in cystathionine beta-synthase and other proteins.
BASH2_01439	SM00400	zinc finger
BASH2_01439	SM00493	BASH2_01439
BASH2_01439	SM00766	DNA primase DnaG DnaB-binding
BASH2_01446	SM00487	DEAD-like helicases superfamily
BASH2_01446	SM00490	helicase superfamily c-terminal domain
BASH2_01447	SM00518	AP endonuclease family 2
BASH2_01450	SM00382	ATPases associated with a variety of cellular activities
BASH2_01462	SM00382	ATPases associated with a variety of cellular activities
BASH2_01468	SM00849	Metallo-beta-lactamase superfamily
BASH2_01470	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BASH2_01475	SM01018	B12 binding domain
BASH2_01486	SM00382	ATPases associated with a variety of cellular activities
BASH2_01493	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
BASH2_01501	SM00487	DEAD-like helicases superfamily
BASH2_01501	SM00490	helicase superfamily c-terminal domain
BASH2_01507	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BASH2_01508	SM00382	ATPases associated with a variety of cellular activities
BASH2_01518	SM00354	helix_turn _helix lactose operon repressor
BASH2_01519	SM00450	Rhodanese Homology Domain
BASH2_01523	SM00529	Helix-turn-helix diphteria tox regulatory element
BASH2_01530	SM00841	Elongation factor P, C-terminal
BASH2_01530	SM01185	BASH2_01530
BASH2_01533	SM00382	ATPases associated with a variety of cellular activities
BASH2_01542	SM00878	Biotin carboxylase C-terminal domain
BASH2_01549	SM00861	Transketolase, pyrimidine binding domain
BASH2_01550	SM00363	S4 RNA-binding domain
BASH2_01553	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BASH2_01554	SM00448	cheY-homologous receiver domain
BASH2_01559	SM00091	PAS domain
BASH2_01559	SM00382	ATPases associated with a variety of cellular activities
BASH2_01561	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BASH2_01565	SM00861	Transketolase, pyrimidine binding domain
BASH2_01571	SM00062	Bacterial periplasmic substrate-binding proteins
BASH2_01571	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
BASH2_01573	SM00382	ATPases associated with a variety of cellular activities
BASH2_01582	SM00849	Metallo-beta-lactamase superfamily
BASH2_01591	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BASH2_01598	SM00347	helix_turn_helix multiple antibiotic resistance protein
BASH2_01609	SM00729	Elongator protein 3, MiaB family, Radical SAM
BASH2_01609	SM00876	Biotin and Thiamin Synthesis associated domain
BASH2_01615	SM00704	CDGSH-type zinc finger. Function unknown.
BASH2_01619	SM00354	helix_turn _helix lactose operon repressor
BASH2_01638	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
BASH2_01642	SM00347	helix_turn_helix multiple antibiotic resistance protein
BASH2_01646	SM00382	ATPases associated with a variety of cellular activities
BASH2_01647	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BASH2_01648	SM00936	Penicillin-binding protein 5, C-terminal domain 
BASH2_01651	SM00387	Histidine kinase-like ATPases
BASH2_01670	SM00849	Metallo-beta-lactamase superfamily
BASH2_01673	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BASH2_01673	SM00866	BASH2_01673
BASH2_01675	SM01061	CAT RNA binding domain
BASH2_01682	SM00267	diguanylate cyclase
BASH2_01688	SM01007	Class II Aldolase and Adducin N-terminal domain
BASH2_01706	SM00382	ATPases associated with a variety of cellular activities
BASH2_01713	SM00382	ATPases associated with a variety of cellular activities
BASH2_01714	SM00642	Alpha-amylase domain
BASH2_01715	SM00642	Alpha-amylase domain
BASH2_01719	SM00354	helix_turn _helix lactose operon repressor
BASH2_01722	SM00387	Histidine kinase-like ATPases
BASH2_01722	SM00388	His Kinase A (phosphoacceptor) domain
BASH2_01740	SM00052	Putative diguanylate phosphodiesterase
BASH2_01752	SM00849	Metallo-beta-lactamase superfamily
BASH2_01758	SM00861	Transketolase, pyrimidine binding domain
BASH2_01773	SM00838	Elongation factor G C-terminus
BASH2_01778	SM00670	Large family of predicted nucleotide-binding domains
BASH2_01782	SM00878	Biotin carboxylase C-terminal domain
BASH2_01795	SM00855	Phosphoglycerate mutase family
BASH2_01806	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BASH2_01815	SM00530	Helix-turn-helix XRE-family like proteins 
BASH2_01816	SM00530	Helix-turn-helix XRE-family like proteins 
BASH2_01820	SM00382	ATPases associated with a variety of cellular activities
BASH2_01842	SM00507	HNH nucleases
BASH2_01866	SM00644	BASH2_01866
BASH2_01869	SM00530	Helix-turn-helix XRE-family like proteins 
BASH2_01876	SM00717	SANT  SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
BASH2_01882	SM00740	BASH2_01882
BASH2_01883	SM00740	BASH2_01883
BASH2_01891	SM00842	Cell division protein FtsA
BASH2_01892	SM00864	Tubulin/FtsZ family, GTPase domain
BASH2_01892	SM00865	Tubulin/FtsZ family, C-terminal domain
BASH2_01901	SM00363	S4 RNA-binding domain
BASH2_01906	SM00363	S4 RNA-binding domain
BASH2_01911	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
BASH2_01912	SM00851	MGS-like domain
BASH2_01912	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
BASH2_01912	SM01209	BASH2_01912
BASH2_01915	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
BASH2_01925	SM00831	Cation transporter/ATPase, N-terminus
BASH2_01928	SM00072	Guanylate kinase homologues.
BASH2_01929	SM01409	BASH2_01929
BASH2_01931	SM00487	DEAD-like helicases superfamily
BASH2_01931	SM00490	helicase superfamily c-terminal domain
BASH2_01936	SM00331	Sigma factor PP2C-like phosphatases
BASH2_01936	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
BASH2_01937	SM00220	Serine/Threonine protein kinases, catalytic domain
BASH2_01937	SM00740	BASH2_01937
BASH2_01940	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
BASH2_01943	SM01120	BASH2_01943
BASH2_01943	SM01121	BASH2_01943
BASH2_01944	SM00487	DEAD-like helicases superfamily
BASH2_01944	SM00490	helicase superfamily c-terminal domain
BASH2_01947	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BASH2_01948	SM00822	BASH2_01948
BASH2_01950	SM00358	Double-stranded RNA binding motif
BASH2_01950	SM00535	Ribonuclease III family
BASH2_01951	SM00968	SMC proteins Flexible Hinge Domain
BASH2_01952	SM00382	ATPases associated with a variety of cellular activities
BASH2_01952	SM00962	SRP54-type protein, GTPase domain
BASH2_01952	SM00963	SRP54-type protein, helical bundle domain
BASH2_01954	SM00382	ATPases associated with a variety of cellular activities
BASH2_01954	SM00962	SRP54-type protein, GTPase domain
BASH2_01954	SM00963	SRP54-type protein, helical bundle domain
BASH2_01964	SM00881	CoA binding domain
BASH2_01966	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
BASH2_01966	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
BASH2_01966	SM00493	BASH2_01966
BASH2_01970	SM00382	ATPases associated with a variety of cellular activities
BASH2_01970	SM01086	C-terminal, D2-small domain, of ClpB protein
BASH2_01979	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BASH2_01982	SM00479	BASH2_01982
BASH2_01982	SM00481	DNA polymerase alpha chain like domain
BASH2_01984	SM00316	Ribosomal protein S1-like RNA-binding domain
BASH2_01984	SM00322	K homology RNA-binding domain
BASH2_01991	SM00904	Riboflavin kinase
BASH2_01992	SM00316	Ribosomal protein S1-like RNA-binding domain
BASH2_01992	SM00322	K homology RNA-binding domain
BASH2_01998	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BASH2_02000	SM01130	BASH2_02000
BASH2_02001	SM00849	Metallo-beta-lactamase superfamily
BASH2_02004	SM00382	ATPases associated with a variety of cellular activities
BASH2_02004	SM00843	BASH2_02004
BASH2_02005	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BASH2_02005	SM00866	BASH2_02005
BASH2_02007	SM00382	ATPases associated with a variety of cellular activities
BASH2_02019	SM00852	Probable molybdopterin binding domain
BASH2_02020	SM00382	ATPases associated with a variety of cellular activities
BASH2_02022	SM00322	K homology RNA-binding domain
BASH2_02022	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BASH2_02028	SM00729	Elongator protein 3, MiaB family, Radical SAM
BASH2_02031	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
BASH2_02031	SM00534	ATPase domain of DNA mismatch repair MUTS family
BASH2_02032	SM00853	MutL C terminal dimerisation domain
BASH2_02032	SM01340	BASH2_02032
BASH2_02033	SM00382	ATPases associated with a variety of cellular activities
BASH2_02036	SM00448	cheY-homologous receiver domain
BASH2_02036	SM00862	Transcriptional regulatory protein, C terminal
BASH2_02037	SM00387	Histidine kinase-like ATPases
BASH2_02037	SM00388	His Kinase A (phosphoacceptor) domain
BASH2_02043	SM00257	Lysin motif
BASH2_02045	SM00148	Phospholipase C, catalytic domain (part); domain X
BASH2_02050	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BASH2_02056	SM00052	Putative diguanylate phosphodiesterase
BASH2_02056	SM00091	PAS domain
BASH2_02056	SM00267	diguanylate cyclase
BASH2_02063	SM00478	endonuclease III
BASH2_02065	SM00342	helix_turn_helix, arabinose operon control protein
BASH2_02071	SM00382	ATPases associated with a variety of cellular activities
BASH2_02077	SM00411	bacterial (prokaryotic) histone like domain
BASH2_02081	SM00636	BASH2_02081
BASH2_02088	SM00420	helix_turn_helix, Deoxyribose operon repressor
BASH2_02088	SM01134	BASH2_02088
BASH2_02091	SM00287	Bacterial SH3 domain homologues
BASH2_02098	SM00382	ATPases associated with a variety of cellular activities
BASH2_02103	SM00422	helix_turn_helix, mercury resistance
BASH2_02104	SM01230	BASH2_02104
BASH2_02110	SM00530	Helix-turn-helix XRE-family like proteins 
BASH2_02111	SM00530	Helix-turn-helix XRE-family like proteins 
BASH2_02119	SM00382	ATPases associated with a variety of cellular activities
BASH2_02134	SM00530	Helix-turn-helix XRE-family like proteins 
BASH2_02163	SM00287	Bacterial SH3 domain homologues
BASH2_02163	SM00644	BASH2_02163
BASH2_02167	SM00028	Tetratricopeptide repeats
BASH2_02173	SM00857	Resolvase, N terminal domain
BASH2_02177	SM00062	Bacterial periplasmic substrate-binding proteins
BASH2_02178	SM00382	ATPases associated with a variety of cellular activities
BASH2_02182	SM00861	Transketolase, pyrimidine binding domain
BASH2_02185	SM00382	ATPases associated with a variety of cellular activities
BASH2_02186	SM00382	ATPases associated with a variety of cellular activities
BASH2_02189	SM00644	BASH2_02189
BASH2_02224	SM01058	CarD-like/TRCF domain
BASH2_02230	SM00091	PAS domain
BASH2_02230	SM00387	Histidine kinase-like ATPases
BASH2_02230	SM00388	His Kinase A (phosphoacceptor) domain
BASH2_02233	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
BASH2_02234	SM00644	BASH2_02234
BASH2_02234	SM00701	Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme.
BASH2_02247	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BASH2_02255	SM00382	ATPases associated with a variety of cellular activities
BASH2_02257	SM00479	BASH2_02257
BASH2_02261	SM00257	Lysin motif
BASH2_02261	SM00636	BASH2_02261
BASH2_02264	SM01207	BASH2_02264
BASH2_02269	SM00448	cheY-homologous receiver domain
BASH2_02269	SM00862	Transcriptional regulatory protein, C terminal
BASH2_02270	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BASH2_02271	SM00881	CoA binding domain
BASH2_02272	SM00387	Histidine kinase-like ATPases
BASH2_02272	SM00433	TopoisomeraseII
BASH2_02273	SM00434	DNA Topoisomerase IV
BASH2_02276	SM00382	ATPases associated with a variety of cellular activities
BASH2_02299	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BASH2_02299	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
BASH2_02303	SM00729	Elongator protein 3, MiaB family, Radical SAM
BASH2_02307	SM00852	Probable molybdopterin binding domain
BASH2_02329	SM01022	BASH2_02329
BASH2_02334	SM00357	Cold shock protein domain
BASH2_02335	SM00479	BASH2_02335
BASH2_02344	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
BASH2_02359	SM00028	Tetratricopeptide repeats
BASH2_02361	SM00829	Enoylreductase
BASH2_02362	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BASH2_02375	SM00642	Alpha-amylase domain
BASH2_02378	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
BASH2_02378	SM00534	ATPase domain of DNA mismatch repair MUTS family
BASH2_02380	SM00855	Phosphoglycerate mutase family
BASH2_02381	SM00829	Enoylreductase
BASH2_02409	SM00829	Enoylreductase
BASH2_02410	SM00849	Metallo-beta-lactamase superfamily
BASH2_02423	SM00641	Glycosyl hydrolases family 25
BASH2_02424	SM00849	Metallo-beta-lactamase superfamily
BASH2_02431	SM00382	ATPases associated with a variety of cellular activities
BASH2_02435	SM00871	Bacterial transcription activator, effector binding domain
BASH2_02442	SM00636	BASH2_02442
BASH2_02443	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BASH2_02444	SM00248	ankyrin repeats
BASH2_02458	SM00849	Metallo-beta-lactamase superfamily
BASH2_02466	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BASH2_02466	SM00866	BASH2_02466
BASH2_02473	SM00914	BASH2_02473
BASH2_02482	SM01276	BASH2_02482
BASH2_02485	SM00829	Enoylreductase
BASH2_02488	SM00829	Enoylreductase
BASH2_02491	SM00861	Transketolase, pyrimidine binding domain
BASH2_02492	SM01350	BASH2_02492
BASH2_02499	SM00422	helix_turn_helix, mercury resistance
BASH2_02500	SM01091	Transporter associated domain
BASH2_02505	SM00028	Tetratricopeptide repeats
BASH2_02515	SM00382	ATPases associated with a variety of cellular activities
BASH2_02518	SM01266	BASH2_02518
BASH2_02530	SM00530	Helix-turn-helix XRE-family like proteins 
BASH2_02533	SM00382	ATPases associated with a variety of cellular activities
BASH2_02544	SM01207	BASH2_02544
BASH2_02545	SM00530	Helix-turn-helix XRE-family like proteins 
BASH2_02554	SM00382	ATPases associated with a variety of cellular activities
BASH2_02566	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BASH2_02567	SM00382	ATPases associated with a variety of cellular activities
BASH2_02572	SM00347	helix_turn_helix multiple antibiotic resistance protein
BASH2_02582	SM00287	Bacterial SH3 domain homologues
BASH2_02586	SM00342	helix_turn_helix, arabinose operon control protein
BASH2_02598	SM00344	helix_turn_helix ASNC type
BASH2_02610	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BASH2_02615	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
BASH2_02621	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BASH2_02621	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BASH2_02621	SM00319	Homologues of the ligand binding domain of Tar
BASH2_02628	SM00028	Tetratricopeptide repeats
BASH2_02629	SM00354	helix_turn _helix lactose operon repressor
BASH2_02649	SM00347	helix_turn_helix multiple antibiotic resistance protein
BASH2_02651	SM00448	cheY-homologous receiver domain
BASH2_02651	SM00862	Transcriptional regulatory protein, C terminal
BASH2_02652	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BASH2_02652	SM00387	Histidine kinase-like ATPases
BASH2_02652	SM00388	His Kinase A (phosphoacceptor) domain
BASH2_02654	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BASH2_02656	SM00382	ATPases associated with a variety of cellular activities
BASH2_02666	SM00530	Helix-turn-helix XRE-family like proteins 
BASH2_02677	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BASH2_02677	SM00387	Histidine kinase-like ATPases
BASH2_02677	SM00388	His Kinase A (phosphoacceptor) domain
BASH2_02678	SM00448	cheY-homologous receiver domain
BASH2_02678	SM00862	Transcriptional regulatory protein, C terminal
BASH2_02685	SM00347	helix_turn_helix multiple antibiotic resistance protein
BASH2_02697	SM00344	helix_turn_helix ASNC type
BASH2_02701	SM00028	Tetratricopeptide repeats
BASH2_02703	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BASH2_02706	SM00226	Low molecular weight phosphatase family
BASH2_02711	SM00382	ATPases associated with a variety of cellular activities
BASH2_02739	SM01060	BASH2_02739
BASH2_02749	SM00387	Histidine kinase-like ATPases
BASH2_02750	SM00448	cheY-homologous receiver domain
BASH2_02757	SM00919	Malic enzyme, NAD binding domain
BASH2_02757	SM01274	BASH2_02757
BASH2_02764	SM00530	Helix-turn-helix XRE-family like proteins 
BASH2_02765	SM00870	BASH2_02765
BASH2_02784	SM00849	Metallo-beta-lactamase superfamily
BASH2_02797	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BASH2_02801	SM00346	helix_turn_helix isocitrate lyase regulation
BASH2_02802	SM00796	Allophanate hydrolase subunit 1
BASH2_02803	SM00797	Allophanate hydrolase subunit 2
BASH2_02832	SM00448	cheY-homologous receiver domain
BASH2_02832	SM00862	Transcriptional regulatory protein, C terminal
BASH2_02833	SM00387	Histidine kinase-like ATPases
BASH2_02833	SM00388	His Kinase A (phosphoacceptor) domain
BASH2_02837	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BASH2_02842	SM00342	helix_turn_helix, arabinose operon control protein
BASH2_02842	SM00871	Bacterial transcription activator, effector binding domain
BASH2_02847	SM00382	ATPases associated with a variety of cellular activities
BASH2_02850	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BASH2_02851	SM00382	ATPases associated with a variety of cellular activities
BASH2_02857	SM00889	Elongation factor G, domain IV
BASH2_02858	SM00347	helix_turn_helix multiple antibiotic resistance protein
BASH2_02869	SM01060	BASH2_02869
BASH2_02888	SM00850	LytTr DNA-binding domain
BASH2_02893	SM00530	Helix-turn-helix XRE-family like proteins 
BASH2_02895	SM00098	Alkaline phosphatase homologues
BASH2_02899	SM00346	helix_turn_helix isocitrate lyase regulation
BASH2_02902	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
BASH2_02906	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BASH2_02913	SM01133	BASH2_02913
BASH2_02918	SM00382	ATPases associated with a variety of cellular activities
BASH2_02929	SM00287	Bacterial SH3 domain homologues
BASH2_02937	SM00830	Chorismate mutase type II
BASH2_02948	SM00382	ATPases associated with a variety of cellular activities
BASH2_02967	SM00028	Tetratricopeptide repeats
BASH2_02973	SM00382	ATPases associated with a variety of cellular activities
BASH2_02974	SM00062	Bacterial periplasmic substrate-binding proteins
BASH2_02985	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BASH2_02987	SM00382	ATPases associated with a variety of cellular activities
BASH2_03026	SM00448	cheY-homologous receiver domain
BASH2_03026	SM00862	Transcriptional regulatory protein, C terminal
BASH2_03027	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BASH2_03027	SM00387	Histidine kinase-like ATPases
BASH2_03027	SM00388	His Kinase A (phosphoacceptor) domain
BASH2_03028	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
BASH2_03037	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BASH2_03051	SM00091	PAS domain
BASH2_03051	SM00382	ATPases associated with a variety of cellular activities
BASH2_03055	SM01130	BASH2_03055
BASH2_03061	SM01131	BASH2_03061
BASH2_03067	SM00341	Helicase and RNase D C-terminal
BASH2_03067	SM00487	DEAD-like helicases superfamily
BASH2_03067	SM00490	helicase superfamily c-terminal domain
BASH2_03067	SM00956	BASH2_03067
BASH2_03083	SM00849	Metallo-beta-lactamase superfamily
BASH2_03093	SM00060	Fibronectin type 3 domain
BASH2_03093	SM00495	Chitin-binding domain type 3
BASH2_03100	SM00116	Domain in cystathionine beta-synthase and other proteins.
BASH2_03100	SM00382	ATPases associated with a variety of cellular activities
BASH2_03110	SM00861	Transketolase, pyrimidine binding domain
BASH2_03120	SM00420	helix_turn_helix, Deoxyribose operon repressor
BASH2_03120	SM01134	BASH2_03120
BASH2_03124	SM00382	ATPases associated with a variety of cellular activities
BASH2_03146	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BASH2_03151	SM00871	Bacterial transcription activator, effector binding domain
BASH2_03155	SM00642	Alpha-amylase domain
BASH2_03174	SM00465	GIY-YIG type nucleases (URI domain)
BASH2_03196	SM00480	DNA polymerase III beta subunit
BASH2_03209	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BASH2_03218	SM00422	helix_turn_helix, mercury resistance
BASH2_03233	SM00740	BASH2_03233
BASH2_03234	SM00829	Enoylreductase
BASH2_03237	SM00387	Histidine kinase-like ATPases
BASH2_03237	SM00388	His Kinase A (phosphoacceptor) domain
BASH2_03240	SM00382	ATPases associated with a variety of cellular activities
BASH2_03245	SM00091	PAS domain
BASH2_03245	SM00387	Histidine kinase-like ATPases
BASH2_03245	SM00388	His Kinase A (phosphoacceptor) domain
BASH2_03266	SM01209	BASH2_03266
BASH2_03267	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BASH2_03274	SM00382	ATPases associated with a variety of cellular activities
BASH2_03277	SM00382	ATPases associated with a variety of cellular activities
BASH2_03278	SM00382	ATPases associated with a variety of cellular activities
BASH2_03280	SM00387	Histidine kinase-like ATPases
BASH2_03282	SM00448	cheY-homologous receiver domain
BASH2_03282	SM00862	Transcriptional regulatory protein, C terminal
BASH2_03293	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BASH2_03296	SM00342	helix_turn_helix, arabinose operon control protein
BASH2_03302	SM00422	helix_turn_helix, mercury resistance
BASH2_03302	SM00871	Bacterial transcription activator, effector binding domain
BASH2_03306	SM00382	ATPases associated with a variety of cellular activities
BASH2_03318	SM00448	cheY-homologous receiver domain
BASH2_03318	SM00862	Transcriptional regulatory protein, C terminal
BASH2_03319	SM00387	Histidine kinase-like ATPases
BASH2_03319	SM00388	His Kinase A (phosphoacceptor) domain
BASH2_03331	SM00878	Biotin carboxylase C-terminal domain
BASH2_03337	SM00382	ATPases associated with a variety of cellular activities
BASH2_03339	SM00450	Rhodanese Homology Domain
BASH2_03339	SM00849	Metallo-beta-lactamase superfamily
BASH2_03341	SM00860	SMI1 / KNR4 family
BASH2_03344	SM00052	Putative diguanylate phosphodiesterase
BASH2_03344	SM00091	PAS domain
BASH2_03344	SM00267	diguanylate cyclase
BASH2_03346	SM00382	ATPases associated with a variety of cellular activities
BASH2_03350	SM00646	BASH2_03350
BASH2_03354	SM00530	Helix-turn-helix XRE-family like proteins 
BASH2_03372	SM00354	helix_turn _helix lactose operon repressor
BASH2_03373	SM00014	Acid phosphatase homologues
BASH2_03390	SM00855	Phosphoglycerate mutase family
BASH2_03391	SM00347	helix_turn_helix multiple antibiotic resistance protein
BASH2_03396	SM00382	ATPases associated with a variety of cellular activities
BASH2_03402	SM00487	DEAD-like helicases superfamily
BASH2_03402	SM00490	helicase superfamily c-terminal domain
BASH2_03405	SM00849	Metallo-beta-lactamase superfamily
BASH2_03411	SM01207	BASH2_03411
BASH2_03430	SM00530	Helix-turn-helix XRE-family like proteins 
BASH2_03432	SM00646	BASH2_03432
BASH2_03433	SM00382	ATPases associated with a variety of cellular activities
BASH2_03434	SM00382	ATPases associated with a variety of cellular activities
BASH2_03441	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BASH2_03452	SM00357	Cold shock protein domain
BASH2_03460	SM00530	Helix-turn-helix XRE-family like proteins 
BASH2_03465	SM01059	Chloramphenicol acetyltransferase
BASH2_03469	SM00849	Metallo-beta-lactamase superfamily
BASH2_03475	SM00849	Metallo-beta-lactamase superfamily
BASH2_03487	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BASH2_03488	SM00363	S4 RNA-binding domain
BASH2_03496	SM00411	bacterial (prokaryotic) histone like domain
BASH2_03500	SM00923	MbtH-like protein
BASH2_03501	SM00823	Phosphopantetheine attachment site
BASH2_03501	SM00824	Thioesterase
BASH2_03510	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BASH2_03538	SM00754	A domain in the BMP inhibitor chordin and in microbial proteins.
BASH2_03549	SM00530	Helix-turn-helix XRE-family like proteins 
BASH2_03554	SM00860	SMI1 / KNR4 family
BASH2_03558	SM00014	Acid phosphatase homologues
BASH2_03560	SM00219	Tyrosine kinase, catalytic domain
BASH2_03567	SM00382	ATPases associated with a variety of cellular activities
BASH2_03570	SM00882	Coenzyme A transferase
BASH2_03571	SM00882	Coenzyme A transferase
BASH2_03574	SM00387	Histidine kinase-like ATPases
BASH2_03574	SM00388	His Kinase A (phosphoacceptor) domain
BASH2_03577	SM01091	Transporter associated domain
BASH2_03586	SM00382	ATPases associated with a variety of cellular activities
BASH2_03601	SM00829	Enoylreductase
BASH2_03604	SM00421	helix_turn_helix, Lux Regulon
BASH2_03604	SM00448	cheY-homologous receiver domain
BASH2_03605	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BASH2_03626	SM00563	Phosphate acyltransferases
BASH2_03639	SM00382	ATPases associated with a variety of cellular activities
BASH2_03655	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BASH2_03655	SM00387	Histidine kinase-like ATPases
BASH2_03655	SM00388	His Kinase A (phosphoacceptor) domain
BASH2_03656	SM00448	cheY-homologous receiver domain
BASH2_03656	SM00862	Transcriptional regulatory protein, C terminal
BASH2_03667	SM00857	Resolvase, N terminal domain
BASH2_03675	SM00028	Tetratricopeptide repeats
BASH2_03678	SM00382	ATPases associated with a variety of cellular activities
BASH2_03681	SM00327	von Willebrand factor (vWF) type A domain
BASH2_03687	SM00028	Tetratricopeptide repeats
BASH2_03688	SM00028	Tetratricopeptide repeats
BASH2_03691	SM00836	DALR anticodon binding domain
BASH2_03691	SM01016	Arginyl tRNA synthetase N terminal dom
BASH2_03695	SM00567	E-Z type HEAT repeats
BASH2_03695	SM00932	Scaffold protein Nfu/NifU N terminal
BASH2_03702	SM00382	ATPases associated with a variety of cellular activities
BASH2_03703	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BASH2_03714	SM00894	Excalibur calcium-binding domain
BASH2_03728	SM00852	Probable molybdopterin binding domain
BASH2_03730	SM00729	Elongator protein 3, MiaB family, Radical SAM
BASH2_03731	SM00100	Cyclic nucleotide-monophosphate binding domain
BASH2_03731	SM00419	helix_turn_helix, cAMP Regulatory protein
BASH2_03733	SM00382	ATPases associated with a variety of cellular activities
BASH2_03737	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BASH2_03743	SM00460	Transglutaminase/protease-like homologues
BASH2_03746	SM00849	Metallo-beta-lactamase superfamily
BASH2_03750	SM00829	Enoylreductase
BASH2_03754	SM00487	DEAD-like helicases superfamily
BASH2_03754	SM00490	helicase superfamily c-terminal domain
BASH2_03777	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BASH2_03783	SM01005	Alanine racemase, C-terminal domain
BASH2_03786	SM00855	Phosphoglycerate mutase family
BASH2_03787	SM00244	prohibitin homologues
BASH2_03800	SM01091	Transporter associated domain
BASH2_03807	SM00155	Phospholipase D. Active site motifs.
BASH2_03817	SM00855	Phosphoglycerate mutase family
BASH2_03832	SM00833	Cobalamin synthesis protein cobW C-terminal domain
BASH2_03845	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BASH2_03845	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BASH2_03852	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BASH2_03854	SM00966	SpoVT / AbrB like domain 
BASH2_03860	SM00460	Transglutaminase/protease-like homologues
BASH2_03882	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BASH2_03882	SM00387	Histidine kinase-like ATPases
BASH2_03882	SM00388	His Kinase A (phosphoacceptor) domain
BASH2_03883	SM00448	cheY-homologous receiver domain
BASH2_03883	SM00862	Transcriptional regulatory protein, C terminal
BASH2_03900	SM00387	Histidine kinase-like ATPases
BASH2_03900	SM00388	His Kinase A (phosphoacceptor) domain
BASH2_03901	SM00448	cheY-homologous receiver domain
BASH2_03901	SM00862	Transcriptional regulatory protein, C terminal
BASH2_03902	SM00382	ATPases associated with a variety of cellular activities
BASH2_03905	SM00287	Bacterial SH3 domain homologues
BASH2_03911	SM00382	ATPases associated with a variety of cellular activities
BASH2_03912	SM00382	ATPases associated with a variety of cellular activities
BASH2_03916	SM00347	helix_turn_helix multiple antibiotic resistance protein
BASH2_03923	SM00382	ATPases associated with a variety of cellular activities
BASH2_03924	SM00382	ATPases associated with a variety of cellular activities
BASH2_03931	SM00833	Cobalamin synthesis protein cobW C-terminal domain
BASH2_03951	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
BASH2_03951	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
BASH2_03951	SM00493	BASH2_03951
BASH2_03953	SM00287	Bacterial SH3 domain homologues
BASH2_03955	SM01011	Aminopeptidase P, N-terminal domain
BASH2_03962	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
BASH2_03964	SM01133	BASH2_03964
BASH2_03974	SM00450	Rhodanese Homology Domain
BASH2_03977	SM00387	Histidine kinase-like ATPases
BASH2_03977	SM00388	His Kinase A (phosphoacceptor) domain
BASH2_03978	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BASH2_03979	SM00448	cheY-homologous receiver domain
BASH2_03979	SM00862	Transcriptional regulatory protein, C terminal
BASH2_03981	SM00729	Elongator protein 3, MiaB family, Radical SAM
BASH2_03996	SM00850	LytTr DNA-binding domain
BASH2_04002	SM00854	Bacterial capsule synthesis protein PGA_cap
BASH2_04037	SM00047	Lysozyme subfamily 2
BASH2_04038	SM00646	BASH2_04038
BASH2_04050	SM00487	DEAD-like helicases superfamily
BASH2_04050	SM00490	helicase superfamily c-terminal domain
BASH2_04051	SM00448	cheY-homologous receiver domain
BASH2_04052	SM00387	Histidine kinase-like ATPases
BASH2_04053	SM00919	Malic enzyme, NAD binding domain
BASH2_04053	SM01274	BASH2_04053
BASH2_04057	SM00155	Phospholipase D. Active site motifs.
BASH2_04060	SM00382	ATPases associated with a variety of cellular activities
BASH2_04062	SM00421	helix_turn_helix, Lux Regulon
BASH2_04062	SM00448	cheY-homologous receiver domain
BASH2_04071	SM00530	Helix-turn-helix XRE-family like proteins 
BASH2_04090	SM00833	Cobalamin synthesis protein cobW C-terminal domain
BASH2_04092	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BASH2_04092	SM00895	BASH2_04092
BASH2_04105	SM00855	Phosphoglycerate mutase family
BASH2_04108	SM00835	Cupin
BASH2_04112	SM00849	Metallo-beta-lactamase superfamily
BASH2_04112	SM01027	Beta-Casp domain
BASH2_04115	SM00382	ATPases associated with a variety of cellular activities
BASH2_04119	SM00530	Helix-turn-helix XRE-family like proteins 
BASH2_04129	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BASH2_04131	SM00382	ATPases associated with a variety of cellular activities
BASH2_04131	SM00962	SRP54-type protein, GTPase domain
BASH2_04146	SM00028	Tetratricopeptide repeats
BASH2_04150	SM00028	Tetratricopeptide repeats
BASH2_04157	SM00448	cheY-homologous receiver domain
BASH2_04158	SM00260	Two component signalling adaptor domain
BASH2_04168	SM00382	ATPases associated with a variety of cellular activities
BASH2_04185	SM00138	Methyltransferase, chemotaxis proteins 
BASH2_04189	SM00260	Two component signalling adaptor domain
BASH2_04189	SM00387	Histidine kinase-like ATPases
BASH2_04189	SM01231	BASH2_04189
BASH2_04190	SM00073	Histidine Phosphotransfer domain
BASH2_04191	SM00448	cheY-homologous receiver domain
BASH2_04209	SM00422	helix_turn_helix, mercury resistance
BASH2_04209	SM00871	Bacterial transcription activator, effector binding domain
BASH2_04210	SM00849	Metallo-beta-lactamase superfamily
BASH2_04221	SM00357	Cold shock protein domain
BASH2_04260	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
BASH2_04260	SM00475	5'-3' exonuclease
BASH2_04266	SM00450	Rhodanese Homology Domain
BASH2_04279	SM00491	BASH2_04279
BASH2_04281	SM00981	BASH2_04281
BASH2_04292	SM00060	Fibronectin type 3 domain
BASH2_04294	SM00478	endonuclease III
BASH2_04294	SM00525	BASH2_04294
BASH2_04299	SM00479	BASH2_04299
BASH2_04299	SM00487	DEAD-like helicases superfamily
BASH2_04299	SM00491	BASH2_04299
BASH2_04308	SM00851	MGS-like domain
BASH2_04312	SM00986	Uracil DNA glycosylase superfamily
BASH2_04312	SM00987	UreE urease accessory protein, C-terminal domain 
BASH2_04322	SM00914	BASH2_04322
BASH2_04323	SM00028	Tetratricopeptide repeats
BASH2_04327	SM00562	BASH2_04327
BASH2_04332	SM00411	bacterial (prokaryotic) histone like domain
BASH2_04343	SM01240	BASH2_04343
BASH2_04344	SM00316	Ribosomal protein S1-like RNA-binding domain
BASH2_04346	SM00870	BASH2_04346
BASH2_04348	SM00644	BASH2_04348
BASH2_04351	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BASH2_04353	SM00422	helix_turn_helix, mercury resistance
BASH2_04356	SM00257	Lysin motif
BASH2_04358	SM00487	DEAD-like helicases superfamily
BASH2_04358	SM00490	helicase superfamily c-terminal domain
BASH2_04364	SM00257	Lysin motif
BASH2_04366	SM00091	PAS domain
BASH2_04366	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BASH2_04366	SM00387	Histidine kinase-like ATPases
BASH2_04366	SM00388	His Kinase A (phosphoacceptor) domain
BASH2_04367	SM00448	cheY-homologous receiver domain
BASH2_04367	SM00862	Transcriptional regulatory protein, C terminal
BASH2_04371	SM00363	S4 RNA-binding domain
BASH2_04382	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BASH2_04382	SM00387	Histidine kinase-like ATPases
BASH2_04382	SM00388	His Kinase A (phosphoacceptor) domain
BASH2_04386	SM00091	PAS domain
BASH2_04386	SM00387	Histidine kinase-like ATPases
BASH2_04386	SM00388	His Kinase A (phosphoacceptor) domain
BASH2_04403	SM00421	helix_turn_helix, Lux Regulon
BASH2_04403	SM00448	cheY-homologous receiver domain
BASH2_04404	SM00387	Histidine kinase-like ATPases
BASH2_04440	SM01329	BASH2_04440
BASH2_04441	SM00917	LeuA allosteric (dimerisation) domain
BASH2_04454	SM00347	helix_turn_helix multiple antibiotic resistance protein
BASH2_04479	SM00344	helix_turn_helix ASNC type
BASH2_04483	SM00382	ATPases associated with a variety of cellular activities
BASH2_04485	SM00382	ATPases associated with a variety of cellular activities
BASH2_04486	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BASH2_04489	SM00465	GIY-YIG type nucleases (URI domain)
BASH2_04489	SM00496	Intron-encoded nuclease repeat 2
BASH2_04502	SM00387	Histidine kinase-like ATPases
BASH2_04502	SM00388	His Kinase A (phosphoacceptor) domain
BASH2_04506	SM00347	helix_turn_helix multiple antibiotic resistance protein
BASH2_04507	SM00387	Histidine kinase-like ATPases
BASH2_04507	SM00388	His Kinase A (phosphoacceptor) domain
BASH2_04513	SM00365	Leucine-rich repeat, SDS22-like subfamily
BASH2_04513	SM00369	Leucine-rich repeats, typical (most populated) subfamily
BASH2_04517	SM00420	helix_turn_helix, Deoxyribose operon repressor
BASH2_04517	SM01134	BASH2_04517
BASH2_04531	SM00822	BASH2_04531
BASH2_04547	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BASH2_04547	SM00895	BASH2_04547
BASH2_04548	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BASH2_04548	SM00387	Histidine kinase-like ATPases
BASH2_04548	SM00388	His Kinase A (phosphoacceptor) domain
BASH2_04549	SM00448	cheY-homologous receiver domain
BASH2_04549	SM00862	Transcriptional regulatory protein, C terminal
BASH2_04559	SM00014	Acid phosphatase homologues
BASH2_04563	SM00382	ATPases associated with a variety of cellular activities
BASH2_04566	SM00530	Helix-turn-helix XRE-family like proteins 
BASH2_04583	SM00530	Helix-turn-helix XRE-family like proteins 
BASH2_04584	SM00861	Transketolase, pyrimidine binding domain
BASH2_04644	SM00954	Region found in RelA / SpoT proteins
BASH2_04646	SM01118	BASH2_04646
BASH2_04651	SM00155	Phospholipase D. Active site motifs.
BASH2_04659	SM00382	ATPases associated with a variety of cellular activities
BASH2_04660	SM00382	ATPases associated with a variety of cellular activities
BASH2_04668	SM00825	Beta-ketoacyl synthase
BASH2_04676	SM00382	ATPases associated with a variety of cellular activities
BASH2_04676	SM01086	C-terminal, D2-small domain, of ClpB protein
BASH2_04685	SM00316	Ribosomal protein S1-like RNA-binding domain
BASH2_04688	SM00530	Helix-turn-helix XRE-family like proteins 
BASH2_04689	SM00642	Alpha-amylase domain
BASH2_04691	SM01060	BASH2_04691
BASH2_04713	SM00357	Cold shock protein domain
BASH2_04721	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BASH2_04721	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BASH2_04726	SM00448	cheY-homologous receiver domain
BASH2_04726	SM00862	Transcriptional regulatory protein, C terminal
BASH2_04727	SM00387	Histidine kinase-like ATPases
BASH2_04727	SM00388	His Kinase A (phosphoacceptor) domain
BASH2_04730	SM00342	helix_turn_helix, arabinose operon control protein
BASH2_04730	SM00871	Bacterial transcription activator, effector binding domain
BASH2_04733	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BASH2_04747	SM00725	NEAr Transporter domain
BASH2_04752	SM00849	Metallo-beta-lactamase superfamily
BASH2_04753	SM00354	helix_turn _helix lactose operon repressor
BASH2_04774	SM00422	helix_turn_helix, mercury resistance
BASH2_04789	SM00382	ATPases associated with a variety of cellular activities
BASH2_04792	SM00347	helix_turn_helix multiple antibiotic resistance protein
BASH2_04800	SM00347	helix_turn_helix multiple antibiotic resistance protein
BASH2_04809	SM00530	Helix-turn-helix XRE-family like proteins 
BASH2_04814	SM00028	Tetratricopeptide repeats
BASH2_04819	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BASH2_04826	SM00829	Enoylreductase
BASH2_04834	SM00387	Histidine kinase-like ATPases
BASH2_04834	SM00388	His Kinase A (phosphoacceptor) domain
BASH2_04834	SM00448	cheY-homologous receiver domain
BASH2_04835	SM00138	Methyltransferase, chemotaxis proteins 
BASH2_04836	SM00331	Sigma factor PP2C-like phosphatases
BASH2_04836	SM00448	cheY-homologous receiver domain
BASH2_04848	SM00460	Transglutaminase/protease-like homologues
BASH2_04852	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BASH2_04861	SM01120	BASH2_04861
BASH2_04868	SM00347	helix_turn_helix multiple antibiotic resistance protein
BASH2_04894	SM00422	helix_turn_helix, mercury resistance
BASH2_04900	SM00448	cheY-homologous receiver domain
BASH2_04901	SM00091	PAS domain
BASH2_04901	SM00387	Histidine kinase-like ATPases
BASH2_04903	SM00860	SMI1 / KNR4 family
BASH2_04904	SM00860	SMI1 / KNR4 family
BASH2_04909	SM00382	ATPases associated with a variety of cellular activities
BASH2_04924	SM00646	BASH2_04924
BASH2_04938	SM00635	Bacterial Ig-like domain 2
BASH2_04941	SM00957	SecA DEAD-like domain
BASH2_04941	SM00958	SecA preprotein cross-linking domain
BASH2_04948	SM00729	Elongator protein 3, MiaB family, Radical SAM
BASH2_04950	SM00644	BASH2_04950
BASH2_04965	SM00382	ATPases associated with a variety of cellular activities
BASH2_04967	SM00062	Bacterial periplasmic substrate-binding proteins
BASH2_04967	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
BASH2_04968	SM00382	ATPases associated with a variety of cellular activities
BASH2_04970	SM00382	ATPases associated with a variety of cellular activities
BASH2_04976	SM01060	BASH2_04976
BASH2_04990	SM00344	helix_turn_helix ASNC type
BASH2_05011	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
BASH2_05022	SM00382	ATPases associated with a variety of cellular activities
BASH2_05024	SM00287	Bacterial SH3 domain homologues
BASH2_05034	SM00829	Enoylreductase
BASH2_05039	SM00450	Rhodanese Homology Domain
BASH2_05040	SM00450	Rhodanese Homology Domain
BASH2_05042	SM00450	Rhodanese Homology Domain
BASH2_05042	SM00849	Metallo-beta-lactamase superfamily
BASH2_05043	SM00450	Rhodanese Homology Domain
BASH2_05045	SM00450	Rhodanese Homology Domain
BASH2_05049	SM00347	helix_turn_helix multiple antibiotic resistance protein
BASH2_05063	SM00354	helix_turn _helix lactose operon repressor
BASH2_05065	SM00640	Glycosyl hydrolases family 32
BASH2_05072	SM00347	helix_turn_helix multiple antibiotic resistance protein
BASH2_05089	SM00382	ATPases associated with a variety of cellular activities
BASH2_05091	SM00287	Bacterial SH3 domain homologues
BASH2_05094	SM00116	Domain in cystathionine beta-synthase and other proteins.
BASH2_05101	SM00899	BASH2_05101
BASH2_05118	SM00530	Helix-turn-helix XRE-family like proteins 
BASH2_05128	SM00530	Helix-turn-helix XRE-family like proteins 
BASH2_05130	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BASH2_05137	SM00770	Zinc dependent phospholipase C (alpha toxin)
BASH2_05139	SM00829	Enoylreductase
BASH2_05146	SM00382	ATPases associated with a variety of cellular activities
BASH2_05149	SM00354	helix_turn _helix lactose operon repressor
BASH2_05152	SM00347	helix_turn_helix multiple antibiotic resistance protein
BASH2_05154	SM00382	ATPases associated with a variety of cellular activities
BASH2_05155	SM00382	ATPases associated with a variety of cellular activities
BASH2_05164	SM00448	cheY-homologous receiver domain
BASH2_05164	SM00862	Transcriptional regulatory protein, C terminal
BASH2_05165	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BASH2_05165	SM00387	Histidine kinase-like ATPases
BASH2_05165	SM00388	His Kinase A (phosphoacceptor) domain
BASH2_05175	SM00062	Bacterial periplasmic substrate-binding proteins
BASH2_05175	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
BASH2_05176	SM00382	ATPases associated with a variety of cellular activities
BASH2_05183	SM00642	Alpha-amylase domain
BASH2_05185	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BASH2_05185	SM00866	BASH2_05185
BASH2_05187	SM00052	Putative diguanylate phosphodiesterase
BASH2_05187	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BASH2_05187	SM00091	PAS domain
BASH2_05187	SM00267	diguanylate cyclase
BASH2_05190	SM00155	Phospholipase D. Active site motifs.
BASH2_05191	SM00382	ATPases associated with a variety of cellular activities
BASH2_05192	SM00327	von Willebrand factor (vWF) type A domain
BASH2_05197	SM00382	ATPases associated with a variety of cellular activities
BASH2_05203	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BASH2_05217	SM00530	Helix-turn-helix XRE-family like proteins 
BASH2_05220	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BASH2_05222	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
BASH2_05222	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
BASH2_05227	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BASH2_05227	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
BASH2_05231	SM00448	cheY-homologous receiver domain
BASH2_05231	SM00862	Transcriptional regulatory protein, C terminal
BASH2_05232	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BASH2_05232	SM00387	Histidine kinase-like ATPases
BASH2_05232	SM00388	His Kinase A (phosphoacceptor) domain
BASH2_05234	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BASH2_05237	SM00919	Malic enzyme, NAD binding domain
BASH2_05237	SM01274	BASH2_05237
BASH2_05239	SM00448	cheY-homologous receiver domain
BASH2_05240	SM00387	Histidine kinase-like ATPases
BASH2_05241	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BASH2_05241	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BASH2_05244	SM00387	Histidine kinase-like ATPases
BASH2_05244	SM00388	His Kinase A (phosphoacceptor) domain
BASH2_05245	SM00448	cheY-homologous receiver domain
BASH2_05245	SM00862	Transcriptional regulatory protein, C terminal
BASH2_05250	SM00382	ATPases associated with a variety of cellular activities
BASH2_05252	SM00248	ankyrin repeats
BASH2_05257	SM00448	cheY-homologous receiver domain
BASH2_05258	SM00091	PAS domain
BASH2_05258	SM00387	Histidine kinase-like ATPases
BASH2_05259	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BASH2_05259	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BASH2_05260	SM00244	prohibitin homologues
BASH2_05262	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
BASH2_05265	SM00364	Leucine-rich repeats, bacterial type
BASH2_05265	SM00365	Leucine-rich repeat, SDS22-like subfamily
BASH2_05265	SM00369	Leucine-rich repeats, typical (most populated) subfamily
BASH2_05265	SM00725	NEAr Transporter domain
BASH2_05267	SM00763	PrkA AAA domain
BASH2_05269	SM00052	Putative diguanylate phosphodiesterase
BASH2_05269	SM00091	PAS domain
BASH2_05269	SM00267	diguanylate cyclase
BASH2_05272	SM00567	E-Z type HEAT repeats
BASH2_05286	SM00382	ATPases associated with a variety of cellular activities
BASH2_05290	SM00382	ATPases associated with a variety of cellular activities
BASH2_05295	SM00478	endonuclease III
BASH2_05295	SM00525	BASH2_05295
BASH2_05311	SM00984	UDP binding domain
BASH2_05323	SM00530	Helix-turn-helix XRE-family like proteins 
BASH2_05328	SM00382	ATPases associated with a variety of cellular activities
BASH2_05374	SM00382	ATPases associated with a variety of cellular activities
BASH2_05379	SM00530	Helix-turn-helix XRE-family like proteins 
BASH2_05380	SM00530	Helix-turn-helix XRE-family like proteins 
BASH2_05386	SM00478	endonuclease III
BASH2_05406	SM00226	Low molecular weight phosphatase family
BASH2_05408	SM00831	Cation transporter/ATPase, N-terminus
BASH2_05417	SM00946	Prolyl-tRNA synthetase, C-terminal
BASH2_05422	SM00530	Helix-turn-helix XRE-family like proteins 
BASH2_05428	SM00060	Fibronectin type 3 domain
BASH2_05428	SM00636	BASH2_05428
BASH2_05428	SM00637	BASH2_05428
BASH2_05429	SM00382	ATPases associated with a variety of cellular activities
BASH2_05430	SM00382	ATPases associated with a variety of cellular activities
BASH2_05434	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BASH2_05434	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BASH2_05438	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
BASH2_05438	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
BASH2_05438	SM00493	BASH2_05438
BASH2_05442	SM00642	Alpha-amylase domain
BASH2_05443	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BASH2_05443	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BASH2_05444	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BASH2_05444	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BASH2_05445	SM00382	ATPases associated with a variety of cellular activities
BASH2_05446	SM00062	Bacterial periplasmic substrate-binding proteins
BASH2_05446	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
BASH2_05470	SM01007	Class II Aldolase and Adducin N-terminal domain
BASH2_05480	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BASH2_05493	SM00382	ATPases associated with a variety of cellular activities
BASH2_05496	SM00046	Diacylglycerol kinase catalytic domain (presumed)
BASH2_05497	SM00845	GatB domain
BASH2_05501	SM00347	helix_turn_helix multiple antibiotic resistance protein
BASH2_05507	SM00382	ATPases associated with a variety of cellular activities
BASH2_05507	SM00930	BASH2_05507
BASH2_05513	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BASH2_05513	SM00292	breast cancer carboxy-terminal domain
BASH2_05513	SM00532	Ligase N family
BASH2_05517	SM00244	prohibitin homologues
BASH2_05519	SM01209	BASH2_05519
BASH2_05519	SM01210	BASH2_05519
BASH2_05520	SM00798	AICARFT/IMPCHase bienzyme
BASH2_05520	SM00851	MGS-like domain
BASH2_05525	SM01211	BASH2_05525
BASH2_05528	SM00998	Adenylosuccinate lyase C-terminus
BASH2_05530	SM01001	AIR carboxylase
BASH2_05532	SM00448	cheY-homologous receiver domain
BASH2_05532	SM00862	Transcriptional regulatory protein, C terminal
BASH2_05533	SM00387	Histidine kinase-like ATPases
BASH2_05533	SM00388	His Kinase A (phosphoacceptor) domain
BASH2_05534	SM00382	ATPases associated with a variety of cellular activities
BASH2_05549	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BASH2_05549	SM00387	Histidine kinase-like ATPases
BASH2_05549	SM00388	His Kinase A (phosphoacceptor) domain
BASH2_05550	SM00448	cheY-homologous receiver domain
BASH2_05550	SM00862	Transcriptional regulatory protein, C terminal
BASH2_05554	SM00883	Chaperonin 10 Kd subunit
BASH2_05556	SM00881	CoA binding domain
BASH2_05557	SM00382	ATPases associated with a variety of cellular activities
BASH2_05563	SM00731	SprT homologues.
BASH2_05564	SM00316	Ribosomal protein S1-like RNA-binding domain
BASH2_05564	SM00732	Likely ribonuclease with RNase H fold.
BASH2_pXO10012	SM00507	HNH nucleases
BASH2_pXO10013	SM00487	DEAD-like helicases superfamily
BASH2_pXO10030	SM00748	Higher Eukarytoes and Prokaryotes Nucleotide-binding domain
BASH2_pXO10054	SM00530	Helix-turn-helix XRE-family like proteins 
BASH2_pXO10057	SM00843	BASH2_pXO10057
BASH2_pXO10060	SM00864	Tubulin/FtsZ family, GTPase domain
BASH2_pXO10108	SM00725	NEAr Transporter domain
BASH2_pXO10113	SM00014	Acid phosphatase homologues
BASH2_pXO10118	SM00984	UDP binding domain
BASH2_pXO10142	SM00857	Resolvase, N terminal domain
BASH2_pXO10148	SM00758	BASH2_pXO10148
BASH2_pXO10149	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BASH2_pXO10168	SM00860	SMI1 / KNR4 family
BASH2_pXO10174	SM00954	Region found in RelA / SpoT proteins
BASH2_pXO10180	SM00028	Tetratricopeptide repeats
BASH2_pXO10183	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BASH2_pXO10187	SM00318	Staphylococcal nuclease homologues
BASH2_pXO10189	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
BASH2_pXO10189	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
BASH2_pXO10189	SM00493	BASH2_pXO10189
BASH2_pXO20044	SM00646	BASH2_pXO20044
BASH2_pXO20055	SM00014	Acid phosphatase homologues
BASH2_pXO20063	SM00854	Bacterial capsule synthesis protein PGA_cap
BASH2_pXO20066	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BASH2_pXO20098	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
BASH2_pXO20099	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
BASH2_pXO20099	SM00493	BASH2_pXO20099
