locus-tag class description BAA_0001 PF11638 DnaA N-terminal domain BAA_0001 PF08299 Bacterial dnaA protein helix-turn-helix BAA_0001 PF00308 Bacterial dnaA protein BAA_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain BAA_0002 PF02767 DNA polymerase III beta subunit, central domain BAA_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain BAA_0004 PF02463 RecF/RecN/SMC N terminal domain BAA_0005 PF01751 Toprim domain BAA_0005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAA_0005 PF00204 DNA gyrase B BAA_0005 PF00986 DNA gyrase B subunit, carboxyl terminus BAA_0006 PF00521 DNA gyrase/topoisomerase IV, subunit A BAA_0006 PF03989 DNA gyrase C-terminal domain, beta-propeller BAA_0014 PF00571 CBS domain BAA_0014 PF00478 IMP dehydrogenase / GMP reductase domain BAA_0015 PF00768 D-alanyl-D-alanine carboxypeptidase BAA_0015 PF07943 Penicillin-binding protein 5, C-terminal domain BAA_0016 PF01680 SOR/SNZ family BAA_0017 PF01174 SNO glutamine amidotransferase family BAA_0018 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BAA_0018 PF02403 Seryl-tRNA synthetase N-terminal domain BAA_0021 PF01712 Deoxynucleoside kinase BAA_0022 PF01712 Deoxynucleoside kinase BAA_0023 PF00857 Isochorismatase family BAA_0024 PF14437 MafB19-like deaminase BAA_0026 PF12169 DNA polymerase III subunits gamma and tau domain III BAA_0027 PF02575 YbaB/EbfC DNA-binding family BAA_0028 PF02132 RecR protein BAA_0028 PF13662 Toprim domain BAA_0029 PF10704 Protein of unknown function (DUF2508) BAA_0030 PF07441 SigmaK-factor processing regulatory protein BofA BAA_0038 PF01276 Orn/Lys/Arg decarboxylase, major domain BAA_0038 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BAA_0039 PF02223 Thymidylate kinase BAA_0040 PF09115 DNA polymerase III, delta subunit, C terminal BAA_0041 PF04468 PSP1 C-terminal conserved region BAA_0042 PF06156 Initiation control protein YabA BAA_0043 PF05175 Methyltransferase small domain BAA_0044 PF01541 GIY-YIG catalytic domain BAA_0045 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BAA_0046 PF18277 AbrB C-terminal domain BAA_0046 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BAA_0047 PF09334 tRNA synthetases class I (M) BAA_0047 PF01588 Putative tRNA binding domain BAA_0047 PF08264 Anticodon-binding domain of tRNA BAA_0048 PF01026 TatD related DNase BAA_0049 PF13662 Toprim domain BAA_0049 PF13331 Domain of unknown function (DUF4093) BAA_0050 PF00398 Ribosomal RNA adenine dimethylase BAA_0051 PF05582 YabG peptidase U57 BAA_0052 PF06257 Biofilm formation stimulator VEG BAA_0053 PF00269 Small, acid-soluble spore proteins, alpha/beta type BAA_0054 PF08544 GHMP kinases C terminal BAA_0054 PF00288 GHMP kinases N terminal domain BAA_0055 PF09182 Bacterial purine repressor, N-terminal BAA_0055 PF00156 Phosphoribosyl transferase domain BAA_0057 PF01042 Endoribonuclease L-PSP BAA_0058 PF04026 SpoVG BAA_0059 PF00132 Bacterial transferase hexapeptide (six repeats) BAA_0059 PF00483 Nucleotidyl transferase BAA_0060 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BAA_0060 PF14572 Phosphoribosyl synthetase-associated domain BAA_0061 PF01195 Peptidyl-tRNA hydrolase BAA_0063 PF02559 CarD-like/TRCF domain BAA_0063 PF17757 UvrB interaction domain BAA_0063 PF03461 TRCF domain BAA_0063 PF00271 Helicase conserved C-terminal domain BAA_0063 PF00270 DEAD/DEAH box helicase BAA_0064 PF15714 Stage V sporulation protein T C-terminal, transcription factor BAA_0064 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BAA_0065 PF01943 Polysaccharide biosynthesis protein BAA_0065 PF14667 Polysaccharide biosynthesis C-terminal domain BAA_0066 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BAA_0066 PF03819 MazG nucleotide pyrophosphohydrolase domain BAA_0067 PF01479 S4 domain BAA_0068 PF07873 YabP family BAA_0069 PF09578 Spore cortex protein YabQ (Spore_YabQ) BAA_0071 PF00575 S1 RNA binding domain BAA_0074 PF07228 Stage II sporulation protein E (SpoIIE) BAA_0075 PF09179 TilS substrate binding domain BAA_0075 PF11734 TilS substrate C-terminal domain BAA_0075 PF01171 PP-loop family BAA_0077 PF01434 Peptidase family M41 BAA_0077 PF17862 AAA+ lid domain BAA_0077 PF00004 ATPase family associated with various cellular activities (AAA) BAA_0077 PF06480 FtsH Extracellular BAA_0078 PF03309 Type III pantothenate kinase BAA_0079 PF01430 Hsp33 protein BAA_0080 PF00291 Pyridoxal-phosphate dependent enzyme BAA_0081 PF04715 Anthranilate synthase component I, N terminal region BAA_0081 PF00425 chorismate binding enzyme BAA_0082 PF00117 Glutamine amidotransferase class-I BAA_0083 PF01063 Amino-transferase class IV BAA_0084 PF00809 Pterin binding enzyme BAA_0085 PF02152 Dihydroneopterin aldolase BAA_0086 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BAA_0087 PF01381 Helix-turn-helix BAA_0088 PF01207 Dihydrouridine synthase (Dus) BAA_0089 PF00152 tRNA synthetases class II (D, K and N) BAA_0089 PF01336 OB-fold nucleic acid binding domain BAA_0094 PF17727 CtsR C-terminal dimerization domain BAA_0094 PF05848 CtsR N-terminal HTH domain BAA_0095 PF02151 UvrB/uvrC motif BAA_0096 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain BAA_0097 PF02861 Clp amino terminal domain, pathogenicity island component BAA_0097 PF10431 C-terminal, D2-small domain, of ClpB protein BAA_0097 PF00004 ATPase family associated with various cellular activities (AAA) BAA_0097 PF07724 AAA domain (Cdc48 subfamily) BAA_0097 PF17871 AAA lid domain BAA_0098 PF18073 Rubredoxin metal binding domain BAA_0099 PF10635 DisA bacterial checkpoint controller linker region BAA_0099 PF02457 DisA bacterial checkpoint controller nucleotide-binding BAA_0101 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BAA_0102 PF02542 YgbB family BAA_0103 PF00749 tRNA synthetases class I (E and Q), catalytic domain BAA_0104 PF06426 Serine acetyltransferase, N-terminal BAA_0104 PF00132 Bacterial transferase hexapeptide (six repeats) BAA_0105 PF09190 DALR domain BAA_0105 PF01406 tRNA synthetases class I (C) catalytic domain BAA_0106 PF00636 Ribonuclease III domain BAA_0107 PF00588 SpoU rRNA Methylase family BAA_0107 PF08032 RNA 2'-O ribose methyltransferase substrate binding BAA_0108 PF05991 YacP-like NYN domain BAA_0109 PF04542 Sigma-70 region 2 BAA_0109 PF08281 Sigma-70, region 4 BAA_0110 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BAA_0111 PF02357 Transcription termination factor nusG BAA_0111 PF00467 KOW motif BAA_0112 PF00298 Ribosomal protein L11, RNA binding domain BAA_0112 PF03946 Ribosomal protein L11, N-terminal domain BAA_0113 PF00687 Ribosomal protein L1p/L10e family BAA_0115 PF00466 Ribosomal protein L10 BAA_0116 PF00542 Ribosomal protein L7/L12 C-terminal domain BAA_0116 PF16320 Ribosomal protein L7/L12 dimerisation domain BAA_0117 PF05175 Methyltransferase small domain BAA_0118 PF04561 RNA polymerase Rpb2, domain 2 BAA_0118 PF04565 RNA polymerase Rpb2, domain 3 BAA_0118 PF04563 RNA polymerase beta subunit BAA_0118 PF10385 RNA polymerase beta subunit external 1 domain BAA_0118 PF00562 RNA polymerase Rpb2, domain 6 BAA_0118 PF04560 RNA polymerase Rpb2, domain 7 BAA_0119 PF00623 RNA polymerase Rpb1, domain 2 BAA_0119 PF04997 RNA polymerase Rpb1, domain 1 BAA_0119 PF04998 RNA polymerase Rpb1, domain 5 BAA_0119 PF04983 RNA polymerase Rpb1, domain 3 BAA_0119 PF05000 RNA polymerase Rpb1, domain 4 BAA_0120 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BAA_0121 PF00164 Ribosomal protein S12/S23 BAA_0122 PF00177 Ribosomal protein S7p/S5e BAA_0123 PF14492 Elongation Factor G, domain II BAA_0123 PF00009 Elongation factor Tu GTP binding domain BAA_0123 PF03144 Elongation factor Tu domain 2 BAA_0123 PF03764 Elongation factor G, domain IV BAA_0123 PF00679 Elongation factor G C-terminus BAA_0124 PF03143 Elongation factor Tu C-terminal domain BAA_0124 PF03144 Elongation factor Tu domain 2 BAA_0124 PF00009 Elongation factor Tu GTP binding domain BAA_0125 PF00338 Ribosomal protein S10p/S20e BAA_0126 PF00297 Ribosomal protein L3 BAA_0127 PF00573 Ribosomal protein L4/L1 family BAA_0128 PF00276 Ribosomal protein L23 BAA_0129 PF00181 Ribosomal Proteins L2, RNA binding domain BAA_0129 PF03947 Ribosomal Proteins L2, C-terminal domain BAA_0130 PF00203 Ribosomal protein S19 BAA_0131 PF00237 Ribosomal protein L22p/L17e BAA_0132 PF07650 KH domain BAA_0132 PF00189 Ribosomal protein S3, C-terminal domain BAA_0133 PF00252 Ribosomal protein L16p/L10e BAA_0134 PF00831 Ribosomal L29 protein BAA_0135 PF00366 Ribosomal protein S17 BAA_0136 PF00238 Ribosomal protein L14p/L23e BAA_0137 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BAA_0137 PF00467 KOW motif BAA_0138 PF00673 ribosomal L5P family C-terminus BAA_0138 PF00281 Ribosomal protein L5 BAA_0139 PF00253 Ribosomal protein S14p/S29e BAA_0140 PF00410 Ribosomal protein S8 BAA_0141 PF00347 Ribosomal protein L6 BAA_0142 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BAA_0143 PF00333 Ribosomal protein S5, N-terminal domain BAA_0143 PF03719 Ribosomal protein S5, C-terminal domain BAA_0144 PF00327 Ribosomal protein L30p/L7e BAA_0145 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BAA_0146 PF00344 SecY translocase BAA_0147 PF05191 Adenylate kinase, active site lid BAA_0148 PF00557 Metallopeptidase family M24 BAA_0149 PF01176 Translation initiation factor 1A / IF-1 BAA_0150 PF00444 Ribosomal protein L36 BAA_0151 PF00416 Ribosomal protein S13/S18 BAA_0152 PF00411 Ribosomal protein S11 BAA_0153 PF01000 RNA polymerase Rpb3/RpoA insert domain BAA_0153 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BAA_0153 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BAA_0154 PF01196 Ribosomal protein L17 BAA_0155 PF00005 ABC transporter BAA_0156 PF00005 ABC transporter BAA_0157 PF02361 Cobalt transport protein BAA_0158 PF01416 tRNA pseudouridine synthase BAA_0160 PF00572 Ribosomal protein L13 BAA_0161 PF00380 Ribosomal protein S9/S16 BAA_0163 PF01520 N-acetylmuramoyl-L-alanine amidase BAA_0164 PF10609 NUBPL iron-transfer P-loop NTPase BAA_0165 PF17898 Spore germination GerD central core domain BAA_0166 PF14089 KinB-signalling pathway activation in sporulation BAA_0167 PF01522 Polysaccharide deacetylase BAA_0184 PF00491 Arginase family BAA_0185 PF02457 DisA bacterial checkpoint controller nucleotide-binding BAA_0186 PF07949 YbbR-like protein BAA_0187 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BAA_0187 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BAA_0187 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BAA_0187 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BAA_0189 PF01380 SIS domain BAA_0190 PF00561 alpha/beta hydrolase fold BAA_0191 PF07729 FCD domain BAA_0191 PF00392 Bacterial regulatory proteins, gntR family BAA_0194 PF02447 GntP family permease BAA_0195 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BAA_0195 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BAA_0196 PF07676 WD40-like Beta Propeller Repeat BAA_0196 PF00326 Prolyl oligopeptidase family BAA_0205 PF00528 Binding-protein-dependent transport system inner membrane component BAA_0206 PF09383 NIL domain BAA_0206 PF00005 ABC transporter BAA_0207 PF03180 NLPA lipoprotein BAA_0211 PF01565 FAD binding domain BAA_0212 PF07690 Major Facilitator Superfamily BAA_0214 PF07690 Major Facilitator Superfamily BAA_0218 PF00528 Binding-protein-dependent transport system inner membrane component BAA_0219 PF12911 N-terminal TM domain of oligopeptide transport permease C BAA_0219 PF00528 Binding-protein-dependent transport system inner membrane component BAA_0220 PF00005 ABC transporter BAA_0220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BAA_0221 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BAA_0221 PF00005 ABC transporter BAA_0222 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAA_0224 PF12833 Helix-turn-helix domain BAA_0227 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAA_0228 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAA_0230 PF00248 Aldo/keto reductase family BAA_0232 PF04973 Nicotinamide mononucleotide transporter BAA_0233 PF06800 Sugar transport protein BAA_0234 PF00528 Binding-protein-dependent transport system inner membrane component BAA_0237 PF12727 PBP superfamily domain BAA_0237 PF12728 Helix-turn-helix domain BAA_0238 PF03466 LysR substrate binding domain BAA_0238 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAA_0239 PF00892 EamA-like transporter family BAA_0240 PF14142 YrzO-like protein BAA_0241 PF01553 Acyltransferase BAA_0243 PF00356 Bacterial regulatory proteins, lacI family BAA_0243 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BAA_0245 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BAA_0245 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BAA_0248 PF01026 TatD related DNase BAA_0249 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) BAA_0255 PF12848 ABC transporter BAA_0255 PF16326 ABC transporter C-terminal domain BAA_0255 PF00005 ABC transporter BAA_0258 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAA_0259 PF00528 Binding-protein-dependent transport system inner membrane component BAA_0261 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BAA_0261 PF00005 ABC transporter BAA_0267 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAA_0268 PF01557 Fumarylacetoacetate (FAA) hydrolase family BAA_0270 PF07690 Major Facilitator Superfamily BAA_0272 PF01820 D-ala D-ala ligase N-terminus BAA_0272 PF07478 D-ala D-ala ligase C-terminus BAA_0273 PF08245 Mur ligase middle domain BAA_0273 PF02875 Mur ligase family, glutamate ligase domain BAA_0273 PF01225 Mur ligase family, catalytic domain BAA_0274 PF00270 DEAD/DEAH box helicase BAA_0274 PF00271 Helicase conserved C-terminal domain BAA_0275 PF01694 Rhomboid family BAA_0276 PF03851 UV-endonuclease UvdE BAA_0277 PF01648 4'-phosphopantetheinyl transferase superfamily BAA_0279 PF00842 Alanine racemase, C-terminal domain BAA_0279 PF01168 Alanine racemase, N-terminal domain BAA_0280 PF01402 Ribbon-helix-helix protein, copG family BAA_0281 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system BAA_0282 PF17674 HHH domain BAA_0282 PF00575 S1 RNA binding domain BAA_0282 PF09371 Tex-like protein N-terminal domain BAA_0282 PF16921 Tex protein YqgF-like domain BAA_0283 PF17283 SprT-like zinc ribbon domain BAA_0283 PF10263 SprT-like family BAA_0301 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BAA_0302 PF00814 Glycoprotease family BAA_0303 PF00583 Acetyltransferase (GNAT) family BAA_0304 PF00814 Glycoprotease family BAA_0305 PF12848 ABC transporter BAA_0305 PF16326 ABC transporter C-terminal domain BAA_0305 PF00005 ABC transporter BAA_0306 PF06971 Putative DNA-binding protein N-terminus BAA_0306 PF02629 CoA binding domain BAA_0307 PF02517 CPBP intramembrane metalloprotease BAA_0308 PF00166 Chaperonin 10 Kd subunit BAA_0309 PF00118 TCP-1/cpn60 chaperonin family BAA_0311 PF00958 GMP synthase C terminal domain BAA_0311 PF02540 NAD synthase BAA_0311 PF00117 Glutamine amidotransferase class-I BAA_0313 PF00860 Permease family BAA_0314 PF00486 Transcriptional regulatory protein, C terminal BAA_0314 PF00072 Response regulator receiver domain BAA_0315 PF16736 Single Cache-like BAA_0315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAA_0315 PF00989 PAS fold BAA_0315 PF00512 His Kinase A (phospho-acceptor) domain BAA_0322 PF08241 Methyltransferase domain BAA_0333 PF02673 Bacitracin resistance protein BacA BAA_0335 PF00005 ABC transporter BAA_0336 PF00512 His Kinase A (phospho-acceptor) domain BAA_0336 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAA_0337 PF00072 Response regulator receiver domain BAA_0337 PF00486 Transcriptional regulatory protein, C terminal BAA_0343 PF00731 AIR carboxylase BAA_0344 PF02222 ATP-grasp domain BAA_0344 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BAA_0345 PF00206 Lyase BAA_0345 PF10397 Adenylosuccinate lyase C-terminus BAA_0346 PF01259 SAICAR synthetase BAA_0347 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase BAA_0349 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BAA_0349 PF02769 AIR synthase related protein, C-terminal domain BAA_0349 PF00586 AIR synthase related protein, N-terminal domain BAA_0350 PF00156 Phosphoribosyl transferase domain BAA_0351 PF00586 AIR synthase related protein, N-terminal domain BAA_0351 PF02769 AIR synthase related protein, C-terminal domain BAA_0352 PF00551 Formyl transferase BAA_0353 PF01808 AICARFT/IMPCHase bienzyme BAA_0353 PF02142 MGS-like domain BAA_0354 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BAA_0354 PF02843 Phosphoribosylglycinamide synthetase, C domain BAA_0354 PF02844 Phosphoribosylglycinamide synthetase, N domain BAA_0358 PF01884 PcrB family BAA_0359 PF00580 UvrD/REP helicase N-terminal domain BAA_0359 PF13361 UvrD-like helicase C-terminal domain BAA_0360 PF00533 BRCA1 C Terminus (BRCT) domain BAA_0360 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BAA_0360 PF12826 Helix-hairpin-helix motif BAA_0360 PF01653 NAD-dependent DNA ligase adenylation domain BAA_0360 PF03120 NAD-dependent DNA ligase OB-fold domain BAA_0361 PF07537 CamS sex pheromone cAM373 precursor BAA_0362 PF01925 Sulfite exporter TauE/SafE BAA_0363 PF00171 Aldehyde dehydrogenase family BAA_0365 PF00857 Isochorismatase family BAA_0367 PF00005 ABC transporter BAA_0367 PF09383 NIL domain BAA_0368 PF00528 Binding-protein-dependent transport system inner membrane component BAA_0369 PF03180 NLPA lipoprotein BAA_0374 PF01047 MarR family BAA_0376 PF02686 Glu-tRNAGln amidotransferase C subunit BAA_0377 PF01425 Amidase BAA_0378 PF02934 GatB/GatE catalytic domain BAA_0378 PF02637 GatB domain BAA_0379 PF00781 Diacylglycerol kinase catalytic domain BAA_0380 PF13419 Haloacid dehalogenase-like hydrolase BAA_0381 PF00202 Aminotransferase class-III BAA_0382 PF00158 Sigma-54 interaction domain BAA_0383 PF00171 Aldehyde dehydrogenase family BAA_0384 PF00893 Small Multidrug Resistance protein BAA_0385 PF02073 Thermophilic metalloprotease (M29) BAA_0388 PF07662 Na+ dependent nucleoside transporter C-terminus BAA_0388 PF01773 Na+ dependent nucleoside transporter N-terminus BAA_0388 PF07670 Nucleoside recognition BAA_0390 PF01938 TRAM domain BAA_0390 PF05958 tRNA (Uracil-5-)-methyltransferase BAA_0390 PF02475 Met-10+ like-protein BAA_0391 PF01207 Dihydrouridine synthase (Dus) BAA_0393 PF07308 Protein of unknown function (DUF1456) BAA_0396 PF13378 Enolase C-terminal domain-like BAA_0396 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BAA_0399 PF01546 Peptidase family M20/M25/M40 BAA_0399 PF07687 Peptidase dimerisation domain BAA_0401 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAA_0401 PF13192 Thioredoxin domain BAA_0402 PF00578 AhpC/TSA family BAA_0403 PF01636 Phosphotransferase enzyme family BAA_0405 PF00596 Class II Aldolase and Adducin N-terminal domain BAA_0406 PF01032 FecCD transport family BAA_0407 PF01032 FecCD transport family BAA_0408 PF01497 Periplasmic binding protein BAA_0409 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAA_0411 PF12728 Helix-turn-helix domain BAA_0423 PF10127 RNA repair pathway DNA polymerase beta family BAA_0424 PF07690 Major Facilitator Superfamily BAA_0425 PF00355 Rieske [2Fe-2S] domain BAA_0425 PF01266 FAD dependent oxidoreductase BAA_0427 PF00528 Binding-protein-dependent transport system inner membrane component BAA_0428 PF00497 Bacterial extracellular solute-binding proteins, family 3 BAA_0429 PF00005 ABC transporter BAA_0430 PF12729 Four helix bundle sensory module for signal transduction BAA_0430 PF00672 HAMP domain BAA_0430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAA_0431 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAA_0431 PF00672 HAMP domain BAA_0431 PF12729 Four helix bundle sensory module for signal transduction BAA_0432 PF00128 Alpha amylase, catalytic domain BAA_0432 PF16657 Maltogenic Amylase, C-terminal domain BAA_0433 PF00367 phosphotransferase system, EIIB BAA_0433 PF02378 Phosphotransferase system, EIIC BAA_0433 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BAA_0434 PF03372 Endonuclease/Exonuclease/phosphatase family BAA_0436 PF01061 ABC-2 type transporter BAA_0437 PF01751 Toprim domain BAA_0437 PF01131 DNA topoisomerase BAA_0439 PF02110 Hydroxyethylthiazole kinase family BAA_0440 PF02581 Thiamine monophosphate synthase BAA_0441 PF03605 Anaerobic c4-dicarboxylate membrane transporter BAA_0442 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAA_0442 PF00672 HAMP domain BAA_0444 PF01910 Thiamine-binding protein BAA_0445 PF00528 Binding-protein-dependent transport system inner membrane component BAA_0447 PF00005 ABC transporter BAA_0448 PF00005 ABC transporter BAA_0448 PF12848 ABC transporter BAA_0449 PF00041 Fibronectin type III domain BAA_0449 PF00704 Glycosyl hydrolases family 18 BAA_0453 PF00440 Bacterial regulatory proteins, tetR family BAA_0453 PF08360 QacR-like protein, C-terminal region BAA_0457 PF11700 Vacuole effluxer Atg22 like BAA_0462 PF00480 ROK family BAA_0463 PF02342 TerD domain BAA_0464 PF02342 TerD domain BAA_0465 PF02342 TerD domain BAA_0466 PF03741 Integral membrane protein TerC family BAA_0467 PF14266 Putative component of 'biosynthetic module' BAA_0468 PF05816 Toxic anion resistance protein (TelA) BAA_0469 PF00690 Cation transporter/ATPase, N-terminus BAA_0469 PF00689 Cation transporting ATPase, C-terminus BAA_0470 PF06569 Protein of unknown function (DUF1128) BAA_0471 PF01451 Low molecular weight phosphotyrosine protein phosphatase BAA_0473 PF03631 Virulence factor BrkB BAA_0475 PF00892 EamA-like transporter family BAA_0480 PF09335 SNARE associated Golgi protein BAA_0483 PF16242 Pyridoxamine 5'-phosphate oxidase like BAA_0484 PF01699 Sodium/calcium exchanger protein BAA_0485 PF14167 YfkD-like protein BAA_0486 PF08756 YfkB-like domain BAA_0486 PF04055 Radical SAM superfamily BAA_0488 PF05683 Fumarase C-terminus BAA_0488 PF05681 Fumarate hydratase (Fumerase) BAA_0489 PF01522 Polysaccharide deacetylase BAA_0492 PF01938 TRAM domain BAA_0492 PF05958 tRNA (Uracil-5-)-methyltransferase BAA_0493 PF14659 Phage integrase, N-terminal SAM-like domain BAA_0493 PF00589 Phage integrase family BAA_0498 PF01381 Helix-turn-helix BAA_0505 PF07319 Primosomal protein DnaI N-terminus BAA_0505 PF01695 IstB-like ATP binding protein BAA_0549 PF01416 tRNA pseudouridine synthase BAA_0551 PF13426 PAS domain BAA_0551 PF02954 Bacterial regulatory protein, Fis family BAA_0551 PF00158 Sigma-54 interaction domain BAA_0553 PF00324 Amino acid permease BAA_0554 PF07687 Peptidase dimerisation domain BAA_0554 PF01546 Peptidase family M20/M25/M40 BAA_0559 PF04960 Glutaminase BAA_0561 PF02378 Phosphotransferase system, EIIC BAA_0561 PF00367 phosphotransferase system, EIIB BAA_0562 PF00144 Beta-lactamase BAA_0565 PF00535 Glycosyl transferase family 2 BAA_0567 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BAA_0567 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BAA_0567 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BAA_0568 PF02911 Formyl transferase, C-terminal domain BAA_0568 PF01370 NAD dependent epimerase/dehydratase family BAA_0568 PF00551 Formyl transferase BAA_0569 PF00535 Glycosyl transferase family 2 BAA_0570 PF02901 Pyruvate formate lyase-like BAA_0570 PF01228 Glycine radical BAA_0571 PF04055 Radical SAM superfamily BAA_0572 PF04101 Glycosyltransferase family 28 C-terminal domain BAA_0572 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase BAA_0575 PF01979 Amidohydrolase family BAA_0576 PF08338 Domain of unknown function (DUF1731) BAA_0576 PF01370 NAD dependent epimerase/dehydratase family BAA_0577 PF02631 RecX family BAA_0580 PF08176 Small acid-soluble spore protein K family BAA_0581 PF14043 WVELL protein BAA_0582 PF04307 LexA-binding, inner membrane-associated putative hydrolase BAA_0583 PF14815 NUDIX domain BAA_0583 PF00730 HhH-GPD superfamily base excision DNA repair protein BAA_0586 PF04259 Small, acid-soluble spore protein, gamma-type BAA_0588 PF14182 YgaB-like protein BAA_0589 PF04167 Protein of unknown function (DUF402) BAA_0590 PF00664 ABC transporter transmembrane region BAA_0590 PF00005 ABC transporter BAA_0591 PF06081 Aromatic acid exporter family member 1 BAA_0592 PF04898 Glutamate synthase central domain BAA_0592 PF01493 GXGXG motif BAA_0592 PF01645 Conserved region in glutamate synthase BAA_0592 PF00310 Glutamine amidotransferases class-II BAA_0593 PF00202 Aminotransferase class-III BAA_0594 PF00005 ABC transporter BAA_0597 PF07885 Ion channel BAA_0598 PF00578 AhpC/TSA family BAA_0599 PF01475 Ferric uptake regulator family BAA_0600 PF11023 Zinc-ribbon containing domain BAA_0622 PF01709 Transcriptional regulator BAA_0623 PF00293 NUDIX domain BAA_0623 PF13344 Haloacid dehalogenase-like hydrolase BAA_0624 PF00905 Penicillin binding protein transpeptidase domain BAA_0624 PF00912 Transglycosylase BAA_0625 PF13462 Thioredoxin BAA_0627 PF08331 Domain of unknown function (DUF1730) BAA_0628 PF12671 Putative amidase domain BAA_0629 PF00588 SpoU rRNA Methylase family BAA_0630 PF03707 Bacterial signalling protein N terminal repeat BAA_0630 PF00990 Diguanylate cyclase, GGDEF domain BAA_0630 PF00563 EAL domain BAA_0632 PF08298 PrkA AAA domain BAA_0632 PF06798 PrkA serine protein kinase C-terminal domain BAA_0633 PF04285 Protein of unknown function (DUF444) BAA_0636 PF02028 BCCT, betaine/carnitine/choline family transporter BAA_0637 PF01752 Collagenase BAA_0637 PF18496 Collagenase G catalytic helper subdomain BAA_0637 PF08453 Peptidase family M9 N-terminal BAA_0639 PF01145 SPFH domain / Band 7 family BAA_0639 PF15975 Flotillin BAA_0640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAA_0640 PF00672 HAMP domain BAA_0640 PF02743 Cache domain BAA_0641 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BAA_0641 PF17203 Single cache domain 3 BAA_0641 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAA_0641 PF00989 PAS fold BAA_0644 PF03600 Citrate transporter BAA_0648 PF04309 Glycerol-3-phosphate responsive antiterminator BAA_0649 PF17912 MalK OB fold domain BAA_0649 PF00005 ABC transporter BAA_0650 PF00528 Binding-protein-dependent transport system inner membrane component BAA_0651 PF00528 Binding-protein-dependent transport system inner membrane component BAA_0652 PF13416 Bacterial extracellular solute-binding protein BAA_0653 PF00149 Calcineurin-like phosphoesterase BAA_0654 PF00072 Response regulator receiver domain BAA_0654 PF00486 Transcriptional regulatory protein, C terminal BAA_0655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAA_0655 PF00512 His Kinase A (phospho-acceptor) domain BAA_0657 PF13529 Peptidase_C39 like family BAA_0658 PF02743 Cache domain BAA_0658 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAA_0658 PF00672 HAMP domain BAA_0659 PF00989 PAS fold BAA_0659 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BAA_0659 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAA_0659 PF17203 Single cache domain 3 BAA_0660 PF00072 Response regulator receiver domain BAA_0661 PF03390 2-hydroxycarboxylate transporter family BAA_0662 PF03949 Malic enzyme, NAD binding domain BAA_0662 PF00390 Malic enzyme, N-terminal domain BAA_0664 PF00892 EamA-like transporter family BAA_0665 PF00155 Aminotransferase class I and II BAA_0665 PF00392 Bacterial regulatory proteins, gntR family BAA_0667 PF00672 HAMP domain BAA_0667 PF18698 Histidine kinase sensor domain BAA_0667 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAA_0667 PF00512 His Kinase A (phospho-acceptor) domain BAA_0667 PF00989 PAS fold BAA_0668 PF00072 Response regulator receiver domain BAA_0668 PF00486 Transcriptional regulatory protein, C terminal BAA_0670 PF13508 Acetyltransferase (GNAT) domain BAA_0670 PF00583 Acetyltransferase (GNAT) family BAA_0671 PF02634 FdhD/NarQ family BAA_0672 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BAA_0672 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BAA_0672 PF01568 Molydopterin dinucleotide binding domain BAA_0672 PF00384 Molybdopterin oxidoreductase BAA_0672 PF00037 4Fe-4S binding domain BAA_0676 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BAA_0676 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BAA_0677 PF13520 Amino acid permease BAA_0678 PF01022 Bacterial regulatory protein, arsR family BAA_0679 PF00403 Heavy-metal-associated domain BAA_0680 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BAA_0680 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain BAA_0680 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BAA_0683 PF07504 Fungalysin/Thermolysin Propeptide Motif BAA_0683 PF03413 Peptidase propeptide and YPEB domain BAA_0683 PF01447 Thermolysin metallopeptidase, catalytic domain BAA_0683 PF02868 Thermolysin metallopeptidase, alpha-helical domain BAA_0687 PF04294 VanW like protein BAA_0688 PF03816 Cell envelope-related transcriptional attenuator domain BAA_0689 PF07662 Na+ dependent nucleoside transporter C-terminus BAA_0689 PF01773 Na+ dependent nucleoside transporter N-terminus BAA_0690 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAA_0691 PF01595 Cyclin M transmembrane N-terminal domain BAA_0691 PF03471 Transporter associated domain BAA_0691 PF00571 CBS domain BAA_0692 PF10415 Fumarase C C-terminus BAA_0692 PF00206 Lyase BAA_0693 PF02652 L-lactate permease BAA_0694 PF01022 Bacterial regulatory protein, arsR family BAA_0695 PF08141 Small acid-soluble spore protein H family BAA_0696 PF00854 POT family BAA_0697 PF01497 Periplasmic binding protein BAA_0698 PF01032 FecCD transport family BAA_0699 PF01032 FecCD transport family BAA_0700 PF00005 ABC transporter BAA_0701 PF08241 Methyltransferase domain BAA_0702 PF00155 Aminotransferase class I and II BAA_0704 PF00293 NUDIX domain BAA_0704 PF13344 Haloacid dehalogenase-like hydrolase BAA_0705 PF00092 von Willebrand factor type A domain BAA_0706 PF07728 AAA domain (dynein-related subfamily) BAA_0707 PF13091 PLD-like domain BAA_0707 PF13396 Phospholipase_D-nuclease N-terminal BAA_0710 PF03707 Bacterial signalling protein N terminal repeat BAA_0710 PF00990 Diguanylate cyclase, GGDEF domain BAA_0710 PF00563 EAL domain BAA_0711 PF13520 Amino acid permease BAA_0712 PF00392 Bacterial regulatory proteins, gntR family BAA_0712 PF07702 UTRA domain BAA_0713 PF00367 phosphotransferase system, EIIB BAA_0713 PF02378 Phosphotransferase system, EIIC BAA_0714 PF16657 Maltogenic Amylase, C-terminal domain BAA_0714 PF00128 Alpha amylase, catalytic domain BAA_0717 PF03323 Bacillus/Clostridium GerA spore germination protein BAA_0719 PF01636 Phosphotransferase enzyme family BAA_0720 PF01235 Sodium:alanine symporter family BAA_0721 PF00005 ABC transporter BAA_0722 PF00497 Bacterial extracellular solute-binding proteins, family 3 BAA_0723 PF00528 Binding-protein-dependent transport system inner membrane component BAA_0724 PF00528 Binding-protein-dependent transport system inner membrane component BAA_0725 PF00324 Amino acid permease BAA_0730 PF08279 HTH domain BAA_0730 PF13280 WYL domain BAA_0731 PF01872 RibD C-terminal domain BAA_0732 PF18698 Histidine kinase sensor domain BAA_0732 PF00512 His Kinase A (phospho-acceptor) domain BAA_0732 PF00989 PAS fold BAA_0732 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAA_0732 PF00672 HAMP domain BAA_0733 PF00072 Response regulator receiver domain BAA_0733 PF00486 Transcriptional regulatory protein, C terminal BAA_0736 PF01740 STAS domain BAA_0736 PF00916 Sulfate permease family BAA_0737 PF00582 Universal stress protein family BAA_0739 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAA_0740 PF00528 Binding-protein-dependent transport system inner membrane component BAA_0741 PF00528 Binding-protein-dependent transport system inner membrane component BAA_0742 PF00005 ABC transporter BAA_0742 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BAA_0743 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BAA_0743 PF00005 ABC transporter BAA_0744 PF07690 Major Facilitator Superfamily BAA_0745 PF01047 MarR family BAA_0748 PF00356 Bacterial regulatory proteins, lacI family BAA_0749 PF00294 pfkB family carbohydrate kinase BAA_0750 PF05025 RbsD / FucU transport protein family BAA_0751 PF00005 ABC transporter BAA_0752 PF02653 Branched-chain amino acid transport system / permease component BAA_0753 PF13407 Periplasmic binding protein domain BAA_0754 PF00923 Transaldolase/Fructose-6-phosphate aldolase BAA_0755 PF05547 Immune inhibitor A peptidase M6 BAA_0758 PF08240 Alcohol dehydrogenase GroES-like domain BAA_0758 PF00107 Zinc-binding dehydrogenase BAA_0760 PF00882 Zinc dependent phospholipase C BAA_0761 PF03372 Endonuclease/Exonuclease/phosphatase family BAA_0766 PF02673 Bacitracin resistance protein BacA BAA_0767 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAA_0767 PF00672 HAMP domain BAA_0767 PF02743 Cache domain BAA_0768 PF01476 LysM domain BAA_0768 PF06725 3D domain BAA_0769 PF01381 Helix-turn-helix BAA_0771 PF04203 Sortase domain BAA_0772 PF00854 POT family BAA_0773 PF05525 Branched-chain amino acid transport protein BAA_0776 PF00324 Amino acid permease BAA_0777 PF00860 Permease family BAA_0782 PF00999 Sodium/hydrogen exchanger family BAA_0782 PF02080 TrkA-C domain BAA_0782 PF02254 TrkA-N domain BAA_0784 PF00510 Cytochrome c oxidase subunit III BAA_0785 PF00115 Cytochrome C and Quinol oxidase polypeptide I BAA_0786 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BAA_0787 PF13529 Peptidase_C39 like family BAA_0788 PF01546 Peptidase family M20/M25/M40 BAA_0788 PF07687 Peptidase dimerisation domain BAA_0789 PF11755 Protein of unknown function (DUF3311) BAA_0790 PF00474 Sodium:solute symporter family BAA_0791 PF03323 Bacillus/Clostridium GerA spore germination protein BAA_0792 PF03845 Spore germination protein BAA_0793 PF05504 Spore germination B3/ GerAC like, C-terminal BAA_0795 PF07670 Nucleoside recognition BAA_0795 PF02421 Ferrous iron transport protein B BAA_0795 PF07664 Ferrous iron transport protein B C terminus BAA_0795 PF17910 FeoB cytosolic helical domain BAA_0796 PF07670 Nucleoside recognition BAA_0796 PF02421 Ferrous iron transport protein B BAA_0796 PF17910 FeoB cytosolic helical domain BAA_0796 PF07664 Ferrous iron transport protein B C terminus BAA_0797 PF07664 Ferrous iron transport protein B C terminus BAA_0797 PF04023 FeoA domain BAA_0797 PF07670 Nucleoside recognition BAA_0797 PF02421 Ferrous iron transport protein B BAA_0797 PF17910 FeoB cytosolic helical domain BAA_0798 PF12849 PBP superfamily domain BAA_0799 PF00528 Binding-protein-dependent transport system inner membrane component BAA_0800 PF00528 Binding-protein-dependent transport system inner membrane component BAA_0802 PF00873 AcrB/AcrD/AcrF family BAA_0825 PF00571 CBS domain BAA_0829 PF08239 Bacterial SH3 domain BAA_0829 PF00246 Zinc carboxypeptidase BAA_0832 PF03070 TENA/THI-4/PQQC family BAA_0833 PF00005 ABC transporter BAA_0834 PF00528 Binding-protein-dependent transport system inner membrane component BAA_0835 PF09084 NMT1/THI5 like BAA_0836 PF02581 Thiamine monophosphate synthase BAA_0837 PF01266 FAD dependent oxidoreductase BAA_0838 PF02597 ThiS family BAA_0839 PF05690 Thiazole biosynthesis protein ThiG BAA_0840 PF00899 ThiF family BAA_0841 PF08543 Phosphomethylpyrimidine kinase BAA_0847 PF03814 Potassium-transporting ATPase A subunit BAA_0849 PF02669 K+-transporting ATPase, c chain BAA_0850 PF02702 Osmosensitive K+ channel His kinase sensor domain BAA_0851 PF07690 Major Facilitator Superfamily BAA_0852 PF01047 MarR family BAA_0855 PF00860 Permease family BAA_0860 PF00294 pfkB family carbohydrate kinase BAA_0861 PF00251 Glycosyl hydrolases family 32 N-terminal domain BAA_0861 PF08244 Glycosyl hydrolases family 32 C terminal BAA_0862 PF02378 Phosphotransferase system, EIIC BAA_0862 PF00367 phosphotransferase system, EIIB BAA_0863 PF13407 Periplasmic binding protein domain BAA_0863 PF00356 Bacterial regulatory proteins, lacI family BAA_0865 PF00085 Thioredoxin BAA_0866 PF02600 Disulfide bond formation protein DsbB BAA_0867 PF14148 YhdB-like protein BAA_0872 PF03323 Bacillus/Clostridium GerA spore germination protein BAA_0875 PF00881 Nitroreductase family BAA_0876 PF04293 SpoVR like protein BAA_0882 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAA_0882 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BAA_0883 PF02583 Metal-sensitive transcriptional repressor BAA_0884 PF01206 Sulfurtransferase TusA BAA_0884 PF00581 Rhodanese-like domain BAA_0885 PF00753 Metallo-beta-lactamase superfamily BAA_0885 PF00581 Rhodanese-like domain BAA_0886 PF01206 Sulfurtransferase TusA BAA_0890 PF01925 Sulfite exporter TauE/SafE BAA_0892 PF03816 Cell envelope-related transcriptional attenuator domain BAA_0893 PF08240 Alcohol dehydrogenase GroES-like domain BAA_0893 PF00107 Zinc-binding dehydrogenase BAA_0894 PF02690 Na+/Pi-cotransporter BAA_0896 PF07690 Major Facilitator Superfamily BAA_0898 PF08279 HTH domain BAA_0898 PF05043 Mga helix-turn-helix domain BAA_0898 PF00874 PRD domain BAA_0898 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BAA_0899 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BAA_0900 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BAA_0901 PF02378 Phosphotransferase system, EIIC BAA_0904 PF01476 LysM domain BAA_0904 PF06725 3D domain BAA_0905 PF02687 FtsX-like permease family BAA_0905 PF12704 MacB-like periplasmic core domain BAA_0906 PF00005 ABC transporter BAA_0908 PF09529 Integral membrane protein (intg_mem_TP0381) BAA_0912 PF05525 Branched-chain amino acid transport protein BAA_0913 PF05067 Manganese containing catalase BAA_0914 PF12652 CotJB protein BAA_0915 PF11007 Spore coat associated protein JA (CotJA) BAA_0918 PF02735 Ku70/Ku80 beta-barrel domain BAA_0921 PF09335 SNARE associated Golgi protein BAA_0927 PF13520 Amino acid permease BAA_0928 PF00999 Sodium/hydrogen exchanger family BAA_0930 PF01418 Helix-turn-helix domain, rpiR family BAA_0930 PF01380 SIS domain BAA_0931 PF01380 SIS domain BAA_0932 PF00367 phosphotransferase system, EIIB BAA_0932 PF02378 Phosphotransferase system, EIIC BAA_0934 PF07681 DoxX BAA_0937 PF00892 EamA-like transporter family BAA_0938 PF01037 Lrp/AsnC ligand binding domain BAA_0940 PF00893 Small Multidrug Resistance protein BAA_0941 PF00893 Small Multidrug Resistance protein BAA_0942 PF17934 Tetracyclin repressor-like, C-terminal domain BAA_0942 PF00440 Bacterial regulatory proteins, tetR family BAA_0943 PF07690 Major Facilitator Superfamily BAA_0944 PF01638 HxlR-like helix-turn-helix BAA_0946 PF02525 Flavodoxin-like fold BAA_0947 PF12793 Sugar transport-related sRNA regulator N-term BAA_0947 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAA_0948 PF07690 Major Facilitator Superfamily BAA_0950 PF01965 DJ-1/PfpI family BAA_0951 PF00199 Catalase BAA_0951 PF18011 C-terminal domain found in long catalases BAA_0951 PF06628 Catalase-related immune-responsive BAA_0953 PF13520 Amino acid permease BAA_0955 PF01177 Asp/Glu/Hydantoin racemase BAA_0957 PF00171 Aldehyde dehydrogenase family BAA_0958 PF00005 ABC transporter BAA_0958 PF00664 ABC transporter transmembrane region BAA_0961 PF00497 Bacterial extracellular solute-binding proteins, family 3 BAA_0962 PF00528 Binding-protein-dependent transport system inner membrane component BAA_0963 PF00005 ABC transporter BAA_0964 PF00269 Small, acid-soluble spore proteins, alpha/beta type BAA_0966 PF14398 YheC/D like ATP-grasp BAA_0968 PF04286 Protein of unknown function (DUF445) BAA_0969 PF06133 Control of competence regulator ComK, YlbF/YmcA BAA_0972 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BAA_0972 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BAA_0972 PF00205 Thiamine pyrophosphate enzyme, central domain BAA_0973 PF03306 Alpha-acetolactate decarboxylase BAA_0975 PF02245 Methylpurine-DNA glycosylase (MPG) BAA_0980 PF04055 Radical SAM superfamily BAA_0981 PF13193 AMP-binding enzyme C-terminal domain BAA_0981 PF00501 AMP-binding enzyme BAA_0983 PF00916 Sulfate permease family BAA_0983 PF01740 STAS domain BAA_0987 PF07516 SecA Wing and Scaffold domain BAA_0987 PF07517 SecA DEAD-like domain BAA_0987 PF01043 SecA preprotein cross-linking domain BAA_0988 PF01943 Polysaccharide biosynthesis protein BAA_0988 PF14667 Polysaccharide biosynthesis C-terminal domain BAA_0990 PF13205 Bacterial Ig-like domain BAA_0990 PF00395 S-layer homology domain BAA_0990 PF02368 Bacterial Ig-like domain (group 2) BAA_0991 PF00395 S-layer homology domain BAA_0993 PF03062 MBOAT, membrane-bound O-acyltransferase family BAA_0994 PF03062 MBOAT, membrane-bound O-acyltransferase family BAA_0997 PF00378 Enoyl-CoA hydratase/isomerase BAA_1000 PF05343 M42 glutamyl aminopeptidase BAA_1001 PF00395 S-layer homology domain BAA_1001 PF01520 N-acetylmuramoyl-L-alanine amidase BAA_1004 PF05544 Proline racemase BAA_1005 PF02423 Ornithine cyclodeaminase/mu-crystallin family BAA_1011 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAA_1012 PF00528 Binding-protein-dependent transport system inner membrane component BAA_1013 PF12911 N-terminal TM domain of oligopeptide transport permease C BAA_1013 PF00528 Binding-protein-dependent transport system inner membrane component BAA_1016 PF00005 ABC transporter BAA_1016 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BAA_1022 PF00083 Sugar (and other) transporter BAA_1023 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAA_1023 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BAA_1024 PF00072 Response regulator receiver domain BAA_1024 PF08279 HTH domain BAA_1024 PF12431 Transcriptional regulator BAA_1025 PF03401 Tripartite tricarboxylate transporter family receptor BAA_1026 PF02342 TerD domain BAA_1032 PF06445 GyrI-like small molecule binding domain BAA_1032 PF13411 MerR HTH family regulatory protein BAA_1035 PF00772 DnaB-like helicase N terminal domain BAA_1035 PF03796 DnaB-like helicase C terminal domain BAA_1040 PF01925 Sulfite exporter TauE/SafE BAA_1043 PF07690 Major Facilitator Superfamily BAA_1052 PF07993 Male sterility protein BAA_1052 PF00550 Phosphopantetheine attachment site BAA_1053 PF18665 Tetracyclin repressor-like, C-terminal domain BAA_1053 PF00440 Bacterial regulatory proteins, tetR family BAA_1057 PF01066 CDP-alcohol phosphatidyltransferase BAA_1061 PF02733 Dak1 domain BAA_1063 PF02733 Dak1 domain BAA_1064 PF02525 Flavodoxin-like fold BAA_1065 PF02082 Transcriptional regulator BAA_1072 PF00672 HAMP domain BAA_1072 PF01966 HD domain BAA_1076 PF00395 S-layer homology domain BAA_1080 PF11181 Heat induced stress protein YflT BAA_1081 PF05532 CsbD-like BAA_1084 PF01740 STAS domain BAA_1085 PF13581 Histidine kinase-like ATPase domain BAA_1086 PF04542 Sigma-70 region 2 BAA_1086 PF04545 Sigma-70, region 4 BAA_1086 PF04539 Sigma-70 region 3 BAA_1088 PF13426 PAS domain BAA_1088 PF07228 Stage II sporulation protein E (SpoIIE) BAA_1089 PF03705 CheR methyltransferase, all-alpha domain BAA_1089 PF01739 CheR methyltransferase, SAM binding domain BAA_1090 PF01627 Hpt domain BAA_1090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAA_1090 PF00512 His Kinase A (phospho-acceptor) domain BAA_1090 PF00497 Bacterial extracellular solute-binding proteins, family 3 BAA_1090 PF00072 Response regulator receiver domain BAA_1095 PF01906 Putative heavy-metal-binding BAA_1098 PF08240 Alcohol dehydrogenase GroES-like domain BAA_1098 PF00107 Zinc-binding dehydrogenase BAA_1099 PF11121 Protein of unknown function (DUF2639) BAA_1102 PF00149 Calcineurin-like phosphoesterase BAA_1103 PF13514 AAA domain BAA_1105 PF12323 Helix-turn-helix domain BAA_1105 PF01385 Probable transposase BAA_1105 PF07282 Putative transposase DNA-binding domain BAA_1107 PF01966 HD domain BAA_1107 PF01336 OB-fold nucleic acid binding domain BAA_1108 PF00440 Bacterial regulatory proteins, tetR family BAA_1109 PF07690 Major Facilitator Superfamily BAA_1110 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAA_1111 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAA_1112 PF18801 response regulator aspartate phosphatase H, N terminal BAA_1114 PF00561 alpha/beta hydrolase fold BAA_1114 PF08386 TAP-like protein BAA_1118 PF04309 Glycerol-3-phosphate responsive antiterminator BAA_1119 PF00230 Major intrinsic protein BAA_1120 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BAA_1120 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BAA_1121 PF01266 FAD dependent oxidoreductase BAA_1121 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BAA_1124 PF08281 Sigma-70, region 4 BAA_1124 PF04542 Sigma-70 region 2 BAA_1129 PF07690 Major Facilitator Superfamily BAA_1130 PF07690 Major Facilitator Superfamily BAA_1132 PF13538 UvrD-like helicase C-terminal domain BAA_1136 PF01047 MarR family BAA_1137 PF12732 YtxH-like protein BAA_1138 PF01230 HIT domain BAA_1139 PF00005 ABC transporter BAA_1140 PF05975 Bacterial ABC transporter protein EcsB BAA_1141 PF12787 EcsC protein family BAA_1143 PF17934 Tetracyclin repressor-like, C-terminal domain BAA_1143 PF00440 Bacterial regulatory proteins, tetR family BAA_1145 PF03703 Bacterial PH domain BAA_1155 PF03703 Bacterial PH domain BAA_1156 PF03703 Bacterial PH domain BAA_1157 PF03992 Antibiotic biosynthesis monooxygenase BAA_1158 PF00912 Transglycosylase BAA_1158 PF00905 Penicillin binding protein transpeptidase domain BAA_1159 PF01208 Uroporphyrinogen decarboxylase (URO-D) BAA_1166 PF03965 Penicillinase repressor BAA_1168 PF17932 Tetracyclin repressor-like, C-terminal domain BAA_1168 PF00440 Bacterial regulatory proteins, tetR family BAA_1175 PF14149 YhfH-like protein BAA_1176 PF12706 Beta-lactamase superfamily domain BAA_1177 PF03099 Biotin/lipoate A/B protein ligase family BAA_1177 PF10437 Bacterial lipoate protein ligase C-terminus BAA_1179 PF13193 AMP-binding enzyme C-terminal domain BAA_1179 PF00501 AMP-binding enzyme BAA_1181 PF00395 S-layer homology domain BAA_1181 PF01520 N-acetylmuramoyl-L-alanine amidase BAA_1182 PF05593 RHS Repeat BAA_1185 PF05593 RHS Repeat BAA_1193 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BAA_1196 PF01966 HD domain BAA_1198 PF08281 Sigma-70, region 4 BAA_1198 PF04542 Sigma-70 region 2 BAA_1199 PF06445 GyrI-like small molecule binding domain BAA_1199 PF12833 Helix-turn-helix domain BAA_1202 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAA_1202 PF00512 His Kinase A (phospho-acceptor) domain BAA_1203 PF00072 Response regulator receiver domain BAA_1203 PF00486 Transcriptional regulatory protein, C terminal BAA_1208 PF01435 Peptidase family M48 BAA_1208 PF16491 CAAX prenyl protease N-terminal, five membrane helices BAA_1209 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAA_1209 PF00672 HAMP domain BAA_1209 PF02743 Cache domain BAA_1210 PF00892 EamA-like transporter family BAA_1211 PF00150 Cellulase (glycosyl hydrolase family 5) BAA_1211 PF00395 S-layer homology domain BAA_1211 PF03424 Carbohydrate binding domain (family 17/28) BAA_1214 PF00395 S-layer homology domain BAA_1215 PF01274 Malate synthase BAA_1216 PF00463 Isocitrate lyase family BAA_1218 PF00313 'Cold-shock' DNA-binding domain BAA_1221 PF06338 ComK protein BAA_1222 PF09335 SNARE associated Golgi protein BAA_1223 PF10502 Signal peptidase, peptidase S26 BAA_1224 PF12705 PD-(D/E)XK nuclease superfamily BAA_1224 PF13361 UvrD-like helicase C-terminal domain BAA_1225 PF12705 PD-(D/E)XK nuclease superfamily BAA_1225 PF00580 UvrD/REP helicase N-terminal domain BAA_1225 PF13361 UvrD-like helicase C-terminal domain BAA_1227 PF10676 Spore germination protein gerPA/gerPF BAA_1228 PF10970 Spore germination protein GerPE BAA_1230 PF10737 Spore germination protein GerPC BAA_1231 PF10803 Spore germination GerPB BAA_1232 PF10676 Spore germination protein gerPA/gerPF BAA_1234 PF01557 Fumarylacetoacetate (FAA) hydrolase family BAA_1236 PF00202 Aminotransferase class-III BAA_1237 PF07457 Protein of unknown function (DUF1516) BAA_1239 PF13537 Glutamine amidotransferase domain BAA_1239 PF00733 Asparagine synthase BAA_1241 PF06628 Catalase-related immune-responsive BAA_1241 PF00199 Catalase BAA_1244 PF00128 Alpha amylase, catalytic domain BAA_1246 PF04461 Protein of unknown function (DUF520) BAA_1247 PF17783 CvfB-like winged helix domain BAA_1247 PF13509 S1 domain BAA_1249 PF00639 PPIC-type PPIASE domain BAA_1251 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BAA_1251 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BAA_1252 PF12758 Protein of unknown function (DUF3813) BAA_1256 PF10431 C-terminal, D2-small domain, of ClpB protein BAA_1256 PF02861 Clp amino terminal domain, pathogenicity island component BAA_1256 PF17871 AAA lid domain BAA_1256 PF07724 AAA domain (Cdc48 subfamily) BAA_1256 PF00004 ATPase family associated with various cellular activities (AAA) BAA_1260 PF10815 ComZ BAA_1261 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BAA_1261 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BAA_1262 PF02801 Beta-ketoacyl synthase, C-terminal domain BAA_1262 PF00109 Beta-ketoacyl synthase, N-terminal domain BAA_1263 PF10026 Predicted Zn-dependent protease (DUF2268) BAA_1264 PF12227 Protein of unknown function (DUF3603) BAA_1265 PF00579 tRNA synthetases class I (W and Y) BAA_1267 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAA_1268 PF00528 Binding-protein-dependent transport system inner membrane component BAA_1269 PF12911 N-terminal TM domain of oligopeptide transport permease C BAA_1269 PF00528 Binding-protein-dependent transport system inner membrane component BAA_1270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BAA_1270 PF00005 ABC transporter BAA_1271 PF00005 ABC transporter BAA_1271 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BAA_1272 PF01554 MatE BAA_1273 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAA_1276 PF03960 ArsC family BAA_1277 PF03741 Integral membrane protein TerC family BAA_1278 PF05389 Negative regulator of genetic competence (MecA) BAA_1279 PF13396 Phospholipase_D-nuclease N-terminal BAA_1279 PF13091 PLD-like domain BAA_1281 PF08439 Oligopeptidase F BAA_1281 PF01432 Peptidase family M3 BAA_1284 PF01152 Bacterial-like globin BAA_1285 PF01928 CYTH domain BAA_1287 PF04607 Region found in RelA / SpoT proteins BAA_1288 PF01513 ATP-NAD kinase BAA_1289 PF00849 RNA pseudouridylate synthase BAA_1292 PF00149 Calcineurin-like phosphoesterase BAA_1295 PF00535 Glycosyl transferase family 2 BAA_1296 PF08241 Methyltransferase domain BAA_1297 PF05711 Macrocin-O-methyltransferase (TylF) BAA_1300 PF13181 Tetratricopeptide repeat BAA_1300 PF00535 Glycosyl transferase family 2 BAA_1304 PF00483 Nucleotidyl transferase BAA_1305 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BAA_1306 PF16363 GDP-mannose 4,6 dehydratase BAA_1307 PF04321 RmlD substrate binding domain BAA_1311 PF07098 Protein of unknown function (DUF1360) BAA_1315 PF00580 UvrD/REP helicase N-terminal domain BAA_1315 PF13361 UvrD-like helicase C-terminal domain BAA_1316 PF13673 Acetyltransferase (GNAT) domain BAA_1318 PF00756 Putative esterase BAA_1321 PF02368 Bacterial Ig-like domain (group 2) BAA_1322 PF00474 Sodium:solute symporter family BAA_1325 PF00591 Glycosyl transferase family, a/b domain BAA_1325 PF02885 Glycosyl transferase family, helical bundle domain BAA_1325 PF00117 Glutamine amidotransferase class-I BAA_1326 PF02885 Glycosyl transferase family, helical bundle domain BAA_1326 PF00591 Glycosyl transferase family, a/b domain BAA_1327 PF00218 Indole-3-glycerol phosphate synthase BAA_1328 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BAA_1329 PF00291 Pyridoxal-phosphate dependent enzyme BAA_1330 PF00290 Tryptophan synthase alpha chain BAA_1332 PF02652 L-lactate permease BAA_1333 PF10042 Uncharacterized conserved protein (DUF2278) BAA_1337 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAA_1337 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BAA_1343 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BAA_1343 PF00364 Biotin-requiring enzyme BAA_1343 PF02817 e3 binding domain BAA_1344 PF00676 Dehydrogenase E1 component BAA_1344 PF02779 Transketolase, pyrimidine binding domain BAA_1344 PF16870 2-oxoglutarate dehydrogenase C-terminal BAA_1345 PF01381 Helix-turn-helix BAA_1355 PF13649 Methyltransferase domain BAA_1357 PF00768 D-alanyl-D-alanine carboxypeptidase BAA_1357 PF07943 Penicillin-binding protein 5, C-terminal domain BAA_1359 PF12389 Camelysin metallo-endopeptidase BAA_1361 PF12389 Camelysin metallo-endopeptidase BAA_1362 PF08671 Anti-repressor SinI BAA_1362 PF01381 Helix-turn-helix BAA_1363 PF05547 Immune inhibitor A peptidase M6 BAA_1364 PF00171 Aldehyde dehydrogenase family BAA_1365 PF08402 TOBE domain BAA_1365 PF00005 ABC transporter BAA_1366 PF00528 Binding-protein-dependent transport system inner membrane component BAA_1368 PF13416 Bacterial extracellular solute-binding protein BAA_1370 PF03176 MMPL family BAA_1372 PF00849 RNA pseudouridylate synthase BAA_1372 PF01479 S4 domain BAA_1374 PF00188 Cysteine-rich secretory protein family BAA_1375 PF02754 Cysteine-rich domain BAA_1375 PF13183 4Fe-4S dicluster domain BAA_1376 PF02913 FAD linked oxidases, C-terminal domain BAA_1376 PF01565 FAD binding domain BAA_1377 PF05651 Putative sugar diacid recognition BAA_1377 PF17853 GGDEF-like domain BAA_1377 PF13556 PucR C-terminal helix-turn-helix domain BAA_1379 PF00072 Response regulator receiver domain BAA_1379 PF00486 Transcriptional regulatory protein, C terminal BAA_1380 PF00672 HAMP domain BAA_1380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAA_1380 PF18698 Histidine kinase sensor domain BAA_1380 PF00512 His Kinase A (phospho-acceptor) domain BAA_1380 PF00989 PAS fold BAA_1381 PF00392 Bacterial regulatory proteins, gntR family BAA_1381 PF07729 FCD domain BAA_1382 PF02754 Cysteine-rich domain BAA_1383 PF02589 LUD domain BAA_1383 PF11870 Domain of unknown function (DUF3390) BAA_1383 PF13183 4Fe-4S dicluster domain BAA_1384 PF02589 LUD domain BAA_1385 PF01478 Type IV leader peptidase family BAA_1385 PF06750 Bacterial Peptidase A24 N-terminal domain BAA_1388 PF01226 Formate/nitrite transporter BAA_1389 PF03741 Integral membrane protein TerC family BAA_1391 PF02386 Cation transport protein BAA_1392 PF00269 Small, acid-soluble spore proteins, alpha/beta type BAA_1393 PF01575 MaoC like domain BAA_1398 PF00561 alpha/beta hydrolase fold BAA_1400 PF02386 Cation transport protein BAA_1407 PF13419 Haloacid dehalogenase-like hydrolase BAA_1408 PF00266 Aminotransferase class-V BAA_1410 PF08220 DeoR-like helix-turn-helix domain BAA_1410 PF00455 DeoR C terminal sensor domain BAA_1418 PF04748 Divergent polysaccharide deacetylase BAA_1419 PF09388 Spo0E like sporulation regulatory protein BAA_1420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAA_1420 PF02743 Cache domain BAA_1420 PF00512 His Kinase A (phospho-acceptor) domain BAA_1421 PF01047 MarR family BAA_1423 PF12867 DinB superfamily BAA_1425 PF00512 His Kinase A (phospho-acceptor) domain BAA_1425 PF13188 PAS domain BAA_1425 PF13426 PAS domain BAA_1425 PF00989 PAS fold BAA_1425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAA_1427 PF06508 Queuosine biosynthesis protein QueC BAA_1428 PF01242 6-pyruvoyl tetrahydropterin synthase BAA_1429 PF04055 Radical SAM superfamily BAA_1430 PF14489 QueF-like protein BAA_1431 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) BAA_1437 PF07972 NrdI Flavodoxin like BAA_1438 PF08343 Ribonucleotide reductase N-terminal BAA_1438 PF00317 Ribonucleotide reductase, all-alpha domain BAA_1438 PF02867 Ribonucleotide reductase, barrel domain BAA_1440 PF08343 Ribonucleotide reductase N-terminal BAA_1440 PF02867 Ribonucleotide reductase, barrel domain BAA_1440 PF00317 Ribonucleotide reductase, all-alpha domain BAA_1441 PF00268 Ribonucleotide reductase, small chain BAA_1442 PF00392 Bacterial regulatory proteins, gntR family BAA_1443 PF00005 ABC transporter BAA_1445 PF00005 ABC transporter BAA_1449 PF01037 Lrp/AsnC ligand binding domain BAA_1451 PF00857 Isochorismatase family BAA_1453 PF17676 LD-carboxypeptidase C-terminal domain BAA_1453 PF02016 LD-carboxypeptidase N-terminal domain BAA_1454 PF03060 Nitronate monooxygenase BAA_1455 PF04914 DltD protein BAA_1456 PF00550 Phosphopantetheine attachment site BAA_1457 PF03062 MBOAT, membrane-bound O-acyltransferase family BAA_1458 PF13193 AMP-binding enzyme C-terminal domain BAA_1458 PF00501 AMP-binding enzyme BAA_1460 PF07687 Peptidase dimerisation domain BAA_1460 PF01546 Peptidase family M20/M25/M40 BAA_1462 PF00258 Flavodoxin BAA_1465 PF01636 Phosphotransferase enzyme family BAA_1469 PF01554 MatE BAA_1470 PF02673 Bacitracin resistance protein BacA BAA_1475 PF00375 Sodium:dicarboxylate symporter family BAA_1476 PF02386 Cation transport protein BAA_1478 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BAA_1480 PF03698 Uncharacterised protein family (UPF0180) BAA_1483 PF01063 Amino-transferase class IV BAA_1484 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BAA_1484 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BAA_1484 PF00205 Thiamine pyrophosphate enzyme, central domain BAA_1485 PF10369 Small subunit of acetolactate synthase BAA_1485 PF01842 ACT domain BAA_1486 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BAA_1486 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BAA_1487 PF00682 HMGL-like BAA_1487 PF08502 LeuA allosteric (dimerisation) domain BAA_1488 PF00180 Isocitrate/isopropylmalate dehydrogenase BAA_1489 PF00330 Aconitase family (aconitate hydratase) BAA_1490 PF00694 Aconitase C-terminal domain BAA_1491 PF13393 Histidyl-tRNA synthetase BAA_1492 PF01634 ATP phosphoribosyltransferase BAA_1493 PF00815 Histidinol dehydrogenase BAA_1494 PF00475 Imidazoleglycerol-phosphate dehydratase BAA_1495 PF00117 Glutamine amidotransferase class-I BAA_1496 PF00977 Histidine biosynthesis protein BAA_1497 PF00977 Histidine biosynthesis protein BAA_1499 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BAA_1500 PF02811 PHP domain BAA_1502 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BAA_1502 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BAA_1503 PF01066 CDP-alcohol phosphatidyltransferase BAA_1504 PF00884 Sulfatase BAA_1507 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BAA_1507 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BAA_1510 PF01507 Phosphoadenosine phosphosulfate reductase family BAA_1511 PF14306 PUA-like domain BAA_1511 PF01747 ATP-sulfurylase BAA_1513 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BAA_1513 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BAA_1515 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BAA_1516 PF01903 CbiX BAA_1518 PF00209 Sodium:neurotransmitter symporter family BAA_1520 PF00375 Sodium:dicarboxylate symporter family BAA_1523 PF03553 Na+/H+ antiporter family BAA_1526 PF09922 Cell wall-active antibiotics response 4TMS YvqF BAA_1527 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAA_1527 PF00672 HAMP domain BAA_1527 PF07730 Histidine kinase BAA_1528 PF00072 Response regulator receiver domain BAA_1528 PF00196 Bacterial regulatory proteins, luxR family BAA_1530 PF05525 Branched-chain amino acid transport protein BAA_1531 PF08241 Methyltransferase domain BAA_1536 PF00970 Oxidoreductase FAD-binding domain BAA_1536 PF00042 Globin BAA_1536 PF00175 Oxidoreductase NAD-binding domain BAA_1539 PF01925 Sulfite exporter TauE/SafE BAA_1540 PF01384 Phosphate transporter family BAA_1541 PF01865 Protein of unknown function DUF47 BAA_1542 PF00912 Transglycosylase BAA_1542 PF00905 Penicillin binding protein transpeptidase domain BAA_1547 PF01904 Protein of unknown function DUF72 BAA_1549 PF00589 Phage integrase family BAA_1550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAA_1550 PF00512 His Kinase A (phospho-acceptor) domain BAA_1550 PF00989 PAS fold BAA_1550 PF16736 Single Cache-like BAA_1551 PF01048 Phosphorylase superfamily BAA_1554 PF03706 Lysylphosphatidylglycerol synthase TM region BAA_1554 PF09924 Uncharacterised conserved protein (DUF2156) BAA_1557 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BAA_1557 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BAA_1558 PF00768 D-alanyl-D-alanine carboxypeptidase BAA_1558 PF07943 Penicillin-binding protein 5, C-terminal domain BAA_1559 PF07670 Nucleoside recognition BAA_1560 PF07670 Nucleoside recognition BAA_1561 PF00849 RNA pseudouridylate synthase BAA_1561 PF01479 S4 domain BAA_1562 PF00578 AhpC/TSA family BAA_1563 PF05140 ResB-like family BAA_1564 PF01578 Cytochrome C assembly protein BAA_1565 PF00072 Response regulator receiver domain BAA_1565 PF00486 Transcriptional regulatory protein, C terminal BAA_1566 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAA_1566 PF18698 Histidine kinase sensor domain BAA_1566 PF00512 His Kinase A (phospho-acceptor) domain BAA_1566 PF00989 PAS fold BAA_1566 PF00672 HAMP domain BAA_1567 PF01923 Cobalamin adenosyltransferase BAA_1571 PF12822 ECF transporter, substrate-specific component BAA_1573 PF14493 Helix-turn-helix domain BAA_1574 PF00270 DEAD/DEAH box helicase BAA_1574 PF00271 Helicase conserved C-terminal domain BAA_1575 PF02517 CPBP intramembrane metalloprotease BAA_1579 PF02310 B12 binding domain BAA_1579 PF02607 B12 binding domain BAA_1579 PF13411 MerR HTH family regulatory protein BAA_1580 PF05389 Negative regulator of genetic competence (MecA) BAA_1581 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BAA_1581 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BAA_1586 PF00710 Asparaginase, N-terminal BAA_1586 PF17763 Glutaminase/Asparaginase C-terminal domain BAA_1587 PF02224 Cytidylate kinase BAA_1588 PF00575 S1 RNA binding domain BAA_1589 PF01070 FMN-dependent dehydrogenase BAA_1590 PF14140 YpzI-like protein BAA_1592 PF14045 YIEGIA protein BAA_1594 PF01926 50S ribosome-binding GTPase BAA_1594 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BAA_1595 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BAA_1595 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BAA_1597 PF10966 Protein of unknown function (DUF2768) BAA_1599 PF09547 Stage IV sporulation protein A (spore_IV_A) BAA_1600 PF00216 Bacterial DNA-binding protein BAA_1601 PF01227 GTP cyclohydrolase I BAA_1602 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 BAA_1603 PF01209 ubiE/COQ5 methyltransferase family BAA_1604 PF00348 Polyprenyl synthetase BAA_1605 PF00334 Nucleoside diphosphate kinase BAA_1606 PF01264 Chorismate synthase BAA_1607 PF01761 3-dehydroquinate synthase BAA_1608 PF00155 Aminotransferase class I and II BAA_1610 PF08864 UPF0302 domain BAA_1610 PF08858 IDEAL domain BAA_1611 PF10673 Protein of unknown function (DUF2487) BAA_1612 PF00355 Rieske [2Fe-2S] domain BAA_1613 PF00033 Cytochrome b/b6/petB BAA_1614 PF00032 Cytochrome b(C-terminal)/b6/petD BAA_1614 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BAA_1615 PF07187 Protein of unknown function (DUF1405) BAA_1617 PF09577 Sporulation protein YpjB (SpoYpjB) BAA_1618 PF04298 Putative neutral zinc metallopeptidase BAA_1620 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BAA_1620 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BAA_1621 PF03819 MazG nucleotide pyrophosphohydrolase domain BAA_1622 PF05173 Dihydrodipicolinate reductase, C-terminus BAA_1622 PF01113 Dihydrodipicolinate reductase, N-terminus BAA_1623 PF02142 MGS-like domain BAA_1624 PF02585 GlcNAc-PI de-N-acetylase BAA_1625 PF00534 Glycosyl transferases group 1 BAA_1625 PF13439 Glycosyltransferase Family 4 BAA_1626 PF13735 tRNA nucleotidyltransferase domain 2 putative BAA_1626 PF12627 Probable RNA and SrmB- binding site of polymerase A BAA_1626 PF01743 Poly A polymerase head domain BAA_1627 PF03099 Biotin/lipoate A/B protein ligase family BAA_1627 PF02237 Biotin protein ligase C terminal domain BAA_1627 PF08279 HTH domain BAA_1629 PF02548 Ketopantoate hydroxymethyltransferase BAA_1630 PF02569 Pantoate-beta-alanine ligase BAA_1631 PF02261 Aspartate decarboxylase BAA_1632 PF00929 Exonuclease BAA_1632 PF04851 Type III restriction enzyme, res subunit BAA_1632 PF13307 Helicase C-terminal domain BAA_1633 PF14084 Protein of unknown function (DUF4264) BAA_1635 PF00155 Aminotransferase class I and II BAA_1636 PF07261 Replication initiation and membrane attachment BAA_1637 PF10576 Iron-sulfur binding domain of endonuclease III BAA_1637 PF00633 Helix-hairpin-helix motif BAA_1637 PF00730 HhH-GPD superfamily base excision DNA repair protein BAA_1639 PF00912 Transglycosylase BAA_1639 PF00905 Penicillin binding protein transpeptidase domain BAA_1640 PF03838 Recombination protein U BAA_1641 PF10720 Protein of unknown function (DUF2515) BAA_1648 PF06908 YspA SLOG family BAA_1649 PF05103 DivIVA protein BAA_1651 PF01170 Putative RNA methylase family UPF0020 BAA_1651 PF02926 THUMP domain BAA_1653 PF13307 Helicase C-terminal domain BAA_1654 PF02074 Carboxypeptidase Taq (M32) metallopeptidase BAA_1656 PF01636 Phosphotransferase enzyme family BAA_1657 PF00557 Metallopeptidase family M24 BAA_1660 PF00156 Phosphoribosyl transferase domain BAA_1661 PF00860 Permease family BAA_1662 PF04235 Protein of unknown function (DUF418) BAA_1664 PF00350 Dynamin family BAA_1666 PF00583 Acetyltransferase (GNAT) family BAA_1667 PF10752 Protein of unknown function (DUF2533) BAA_1668 PF00581 Rhodanese-like domain BAA_1676 PF00690 Cation transporter/ATPase, N-terminus BAA_1676 PF00689 Cation transporting ATPase, C-terminus BAA_1677 PF01367 5'-3' exonuclease, C-terminal SAM fold BAA_1677 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BAA_1683 PF02397 Bacterial sugar transferase BAA_1686 PF00535 Glycosyl transferase family 2 BAA_1691 PF13673 Acetyltransferase (GNAT) domain BAA_1691 PF18014 Acetyltransferase (GNAT) domain BAA_1695 PF13456 Reverse transcriptase-like BAA_1696 PF01263 Aldose 1-epimerase BAA_1702 PF00313 'Cold-shock' DNA-binding domain BAA_1704 PF01810 LysE type translocator BAA_1707 PF04341 Protein of unknown function, DUF485 BAA_1708 PF00474 Sodium:solute symporter family BAA_1709 PF00202 Aminotransferase class-III BAA_1711 PF00999 Sodium/hydrogen exchanger family BAA_1713 PF06445 GyrI-like small molecule binding domain BAA_1713 PF13411 MerR HTH family regulatory protein BAA_1715 PF04239 Protein of unknown function (DUF421) BAA_1717 PF02698 DUF218 domain BAA_1719 PF00881 Nitroreductase family BAA_1728 PF17209 Hfq protein BAA_1731 PF00691 OmpA family BAA_1731 PF13677 Membrane MotB of proton-channel complex MotA/MotB BAA_1732 PF00072 Response regulator receiver domain BAA_1735 PF04509 CheC-like family BAA_1735 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BAA_1738 PF03705 CheR methyltransferase, all-alpha domain BAA_1738 PF01739 CheR methyltransferase, SAM binding domain BAA_1742 PF00460 Flagella basal body rod protein BAA_1742 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BAA_1748 PF00460 Flagella basal body rod protein BAA_1749 PF00460 Flagella basal body rod protein BAA_1749 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BAA_1750 PF02049 Flagellar hook-basal body complex protein FliE BAA_1753 PF01706 FliG C-terminal domain BAA_1753 PF14841 FliG middle domain BAA_1753 PF14842 FliG N-terminal domain BAA_1755 PF18269 T3SS EscN ATPase C-terminal domain BAA_1755 PF02874 ATP synthase alpha/beta family, beta-barrel domain BAA_1755 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BAA_1761 PF00460 Flagella basal body rod protein BAA_1761 PF07559 Flagellar basal body protein FlaE BAA_1761 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BAA_1767 PF12181 DNA binding domain of the motility gene repressor (MogR) BAA_1780 PF00700 Bacterial flagellin C-terminal helical region BAA_1780 PF00669 Bacterial flagellin N-terminal helical region BAA_1781 PF01464 Transglycosylase SLT domain BAA_1785 PF04509 CheC-like family BAA_1785 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BAA_1787 PF00813 FliP family BAA_1788 PF01313 Bacterial export proteins, family 3 BAA_1790 PF01312 FlhB HrpN YscU SpaS Family BAA_1791 PF00771 FHIPEP family BAA_1794 PF00460 Flagella basal body rod protein BAA_1794 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BAA_1795 PF02272 DHHA1 domain BAA_1795 PF01411 tRNA synthetases class II (A) BAA_1795 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BAA_1800 PF00440 Bacterial regulatory proteins, tetR family BAA_1800 PF17932 Tetracyclin repressor-like, C-terminal domain BAA_1801 PF17329 Family of unknown function (DUF5367) BAA_1803 PF03992 Antibiotic biosynthesis monooxygenase BAA_1804 PF08141 Small acid-soluble spore protein H family BAA_1811 PF00528 Binding-protein-dependent transport system inner membrane component BAA_1812 PF00753 Metallo-beta-lactamase superfamily BAA_1812 PF12706 Beta-lactamase superfamily domain BAA_1817 PF07943 Penicillin-binding protein 5, C-terminal domain BAA_1817 PF00768 D-alanyl-D-alanine carboxypeptidase BAA_1819 PF00300 Histidine phosphatase superfamily (branch 1) BAA_1826 PF00733 Asparagine synthase BAA_1826 PF13537 Glutamine amidotransferase domain BAA_1830 PF01545 Cation efflux family BAA_1830 PF16916 Dimerisation domain of Zinc Transporter BAA_1832 PF00392 Bacterial regulatory proteins, gntR family BAA_1832 PF07729 FCD domain BAA_1833 PF00892 EamA-like transporter family BAA_1834 PF07683 Cobalamin synthesis protein cobW C-terminal domain BAA_1834 PF02492 CobW/HypB/UreG, nucleotide-binding domain BAA_1835 PF03773 Predicted permease BAA_1837 PF00535 Glycosyl transferase family 2 BAA_1839 PF03553 Na+/H+ antiporter family BAA_1840 PF00206 Lyase BAA_1840 PF10415 Fumarase C C-terminus BAA_1846 PF03575 Peptidase family S51 BAA_1850 PF02683 Cytochrome C biogenesis protein transmembrane region BAA_1851 PF00578 AhpC/TSA family BAA_1856 PF00291 Pyridoxal-phosphate dependent enzyme BAA_1857 PF04286 Protein of unknown function (DUF445) BAA_1862 PF00072 Response regulator receiver domain BAA_1862 PF00196 Bacterial regulatory proteins, luxR family BAA_1863 PF07730 Histidine kinase BAA_1863 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAA_1863 PF13492 GAF domain BAA_1863 PF13185 GAF domain BAA_1864 PF00005 ABC transporter BAA_1867 PF13091 PLD-like domain BAA_1868 PF00696 Amino acid kinase family BAA_1869 PF00375 Sodium:dicarboxylate symporter family BAA_1870 PF00206 Lyase BAA_1870 PF10415 Fumarase C C-terminus BAA_1871 PF00390 Malic enzyme, N-terminal domain BAA_1871 PF03949 Malic enzyme, NAD binding domain BAA_1872 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAA_1873 PF00072 Response regulator receiver domain BAA_1873 PF08664 YcbB domain BAA_1874 PF00271 Helicase conserved C-terminal domain BAA_1874 PF04434 SWIM zinc finger BAA_1874 PF00176 SNF2 family N-terminal domain BAA_1876 PF03590 Aspartate-ammonia ligase BAA_1880 PF00696 Amino acid kinase family BAA_1880 PF13840 ACT domain BAA_1884 PF13761 Domain of unknown function (DUF4166) BAA_1885 PF14158 YndJ-like protein BAA_1887 PF13205 Bacterial Ig-like domain BAA_1887 PF02368 Bacterial Ig-like domain (group 2) BAA_1887 PF00395 S-layer homology domain BAA_1889 PF07690 Major Facilitator Superfamily BAA_1892 PF02554 Carbon starvation protein CstA BAA_1896 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BAA_1896 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BAA_1898 PF13167 GTP-binding GTPase N-terminal BAA_1898 PF01926 50S ribosome-binding GTPase BAA_1898 PF16360 GTP-binding GTPase Middle Region BAA_1901 PF07690 Major Facilitator Superfamily BAA_1902 PF00291 Pyridoxal-phosphate dependent enzyme BAA_1905 PF14667 Polysaccharide biosynthesis C-terminal domain BAA_1905 PF01943 Polysaccharide biosynthesis protein BAA_1906 PF00209 Sodium:neurotransmitter symporter family BAA_1907 PF00457 Glycosyl hydrolases family 11 BAA_1907 PF01522 Polysaccharide deacetylase BAA_1907 PF03422 Carbohydrate binding module (family 6) BAA_1909 PF04239 Protein of unknown function (DUF421) BAA_1913 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BAA_1913 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BAA_1916 PF01625 Peptide methionine sulfoxide reductase BAA_1918 PF01063 Amino-transferase class IV BAA_1919 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BAA_1919 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BAA_1919 PF00205 Thiamine pyrophosphate enzyme, central domain BAA_1920 PF10369 Small subunit of acetolactate synthase BAA_1921 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BAA_1921 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BAA_1922 PF00920 Dehydratase family BAA_1923 PF00291 Pyridoxal-phosphate dependent enzyme BAA_1923 PF00585 C-terminal regulatory domain of Threonine dehydratase BAA_1924 PF09587 Bacterial capsule synthesis protein PGA_cap BAA_1927 PF07690 Major Facilitator Superfamily BAA_1928 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BAA_1930 PF00072 Response regulator receiver domain BAA_1930 PF04397 LytTr DNA-binding domain BAA_1931 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BAA_1931 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BAA_1934 PF01979 Amidohydrolase family BAA_1935 PF12146 Serine aminopeptidase, S33 BAA_1935 PF13026 Protein of unknown function (DUF3887) BAA_1941 PF13186 Iron-sulfur cluster-binding domain BAA_1941 PF04055 Radical SAM superfamily BAA_1942 PF13302 Acetyltransferase (GNAT) domain BAA_1943 PF00486 Transcriptional regulatory protein, C terminal BAA_1943 PF00072 Response regulator receiver domain BAA_1947 PF01566 Natural resistance-associated macrophage protein BAA_1950 PF02558 Ketopantoate reductase PanE/ApbA BAA_1950 PF08546 Ketopantoate reductase PanE/ApbA C terminal BAA_1956 PF05791 Bacillus haemolytic enterotoxin (HBL) BAA_1959 PF04198 Putative sugar-binding domain BAA_1960 PF01791 DeoC/LacD family aldolase BAA_1961 PF07662 Na+ dependent nucleoside transporter C-terminus BAA_1961 PF01773 Na+ dependent nucleoside transporter N-terminus BAA_1962 PF02885 Glycosyl transferase family, helical bundle domain BAA_1962 PF00591 Glycosyl transferase family, a/b domain BAA_1962 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BAA_1963 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BAA_1965 PF05979 Bacterial protein of unknown function (DUF896) BAA_1969 PF00557 Metallopeptidase family M24 BAA_1969 PF05195 Aminopeptidase P, N-terminal domain BAA_1970 PF07731 Multicopper oxidase BAA_1970 PF07732 Multicopper oxidase BAA_1971 PF01551 Peptidase family M23 BAA_1976 PF02525 Flavodoxin-like fold BAA_1982 PF13115 YtkA-like BAA_1982 PF05425 Copper resistance protein D BAA_1982 PF04234 CopC domain BAA_1983 PF07987 Domain of unkown function (DUF1775) BAA_1985 PF00892 EamA-like transporter family BAA_1986 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAA_1986 PF03466 LysR substrate binding domain BAA_1987 PF02082 Transcriptional regulator BAA_1988 PF01323 DSBA-like thioredoxin domain BAA_1989 PF00881 Nitroreductase family BAA_1991 PF01425 Amidase BAA_1992 PF01594 AI-2E family transporter BAA_1993 PF00056 lactate/malate dehydrogenase, NAD binding domain BAA_1993 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BAA_1994 PF01593 Flavin containing amine oxidoreductase BAA_1995 PF07683 Cobalamin synthesis protein cobW C-terminal domain BAA_1995 PF02492 CobW/HypB/UreG, nucleotide-binding domain BAA_1998 PF00501 AMP-binding enzyme BAA_1998 PF13193 AMP-binding enzyme C-terminal domain BAA_1999 PF01575 MaoC like domain BAA_2000 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BAA_2000 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BAA_2002 PF12399 Branched-chain amino acid ATP-binding cassette transporter BAA_2002 PF00005 ABC transporter BAA_2003 PF00005 ABC transporter BAA_2004 PF02653 Branched-chain amino acid transport system / permease component BAA_2006 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAA_2006 PF03466 LysR substrate binding domain BAA_2010 PF01047 MarR family BAA_2012 PF01654 Cytochrome bd terminal oxidase subunit I BAA_2013 PF02322 Cytochrome bd terminal oxidase subunit II BAA_2014 PF00664 ABC transporter transmembrane region BAA_2014 PF00005 ABC transporter BAA_2015 PF00005 ABC transporter BAA_2015 PF00664 ABC transporter transmembrane region BAA_2018 PF02016 LD-carboxypeptidase N-terminal domain BAA_2018 PF17676 LD-carboxypeptidase C-terminal domain BAA_2019 PF07943 Penicillin-binding protein 5, C-terminal domain BAA_2019 PF00768 D-alanyl-D-alanine carboxypeptidase BAA_2021 PF01476 LysM domain BAA_2021 PF00877 NlpC/P60 family BAA_2025 PF00072 Response regulator receiver domain BAA_2025 PF00486 Transcriptional regulatory protein, C terminal BAA_2026 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAA_2026 PF16736 Single Cache-like BAA_2026 PF00512 His Kinase A (phospho-acceptor) domain BAA_2026 PF00989 PAS fold BAA_2028 PF00106 short chain dehydrogenase BAA_2030 PF04439 Streptomycin adenylyltransferase BAA_2031 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain BAA_2031 PF01522 Polysaccharide deacetylase BAA_2036 PF00742 Homoserine dehydrogenase BAA_2036 PF03447 Homoserine dehydrogenase, NAD binding domain BAA_2036 PF01842 ACT domain BAA_2037 PF00291 Pyridoxal-phosphate dependent enzyme BAA_2038 PF08544 GHMP kinases C terminal BAA_2038 PF00288 GHMP kinases N terminal domain BAA_2041 PF03816 Cell envelope-related transcriptional attenuator domain BAA_2043 PF00486 Transcriptional regulatory protein, C terminal BAA_2043 PF00072 Response regulator receiver domain BAA_2044 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAA_2044 PF00989 PAS fold BAA_2044 PF00512 His Kinase A (phospho-acceptor) domain BAA_2044 PF16736 Single Cache-like BAA_2045 PF01522 Polysaccharide deacetylase BAA_2047 PF02308 MgtC family BAA_2048 PF00583 Acetyltransferase (GNAT) family BAA_2049 PF06276 Ferric iron reductase FhuF-like transporter BAA_2049 PF04183 IucA / IucC family BAA_2050 PF06276 Ferric iron reductase FhuF-like transporter BAA_2050 PF04183 IucA / IucC family BAA_2051 PF13193 AMP-binding enzyme C-terminal domain BAA_2051 PF00501 AMP-binding enzyme BAA_2054 PF01261 Xylose isomerase-like TIM barrel BAA_2055 PF00269 Small, acid-soluble spore proteins, alpha/beta type BAA_2059 PF01810 LysE type translocator BAA_2061 PF01734 Patatin-like phospholipase BAA_2066 PF00293 NUDIX domain BAA_2066 PF13344 Haloacid dehalogenase-like hydrolase BAA_2067 PF02540 NAD synthase BAA_2071 PF18277 AbrB C-terminal domain BAA_2071 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BAA_2072 PF00082 Subtilase family BAA_2073 PF01022 Bacterial regulatory protein, arsR family BAA_2074 PF00248 Aldo/keto reductase family BAA_2075 PF07690 Major Facilitator Superfamily BAA_2079 PF03193 RsgA GTPase BAA_2080 PF00672 HAMP domain BAA_2080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAA_2080 PF02743 Cache domain BAA_2084 PF00210 Ferritin-like domain BAA_2087 PF00296 Luciferase-like monooxygenase BAA_2089 PF01593 Flavin containing amine oxidoreductase BAA_2091 PF00248 Aldo/keto reductase family BAA_2092 PF02492 CobW/HypB/UreG, nucleotide-binding domain BAA_2092 PF07683 Cobalamin synthesis protein cobW C-terminal domain BAA_2093 PF00583 Acetyltransferase (GNAT) family BAA_2102 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment BAA_2102 PF01297 Zinc-uptake complex component A periplasmic BAA_2104 PF13460 NAD(P)H-binding BAA_2105 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BAA_2106 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BAA_2106 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BAA_2108 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAA_2109 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAA_2111 PF00300 Histidine phosphatase superfamily (branch 1) BAA_2113 PF08757 CotH kinase protein BAA_2114 PF00293 NUDIX domain BAA_2115 PF09335 SNARE associated Golgi protein BAA_2116 PF14667 Polysaccharide biosynthesis C-terminal domain BAA_2116 PF01943 Polysaccharide biosynthesis protein BAA_2118 PF03773 Predicted permease BAA_2119 PF09323 Domain of unknown function (DUF1980) BAA_2120 PF03061 Thioesterase superfamily BAA_2125 PF13460 NAD(P)H-binding BAA_2126 PF04306 Protein of unknown function (DUF456) BAA_2127 PF01595 Cyclin M transmembrane N-terminal domain BAA_2127 PF03471 Transporter associated domain BAA_2127 PF00571 CBS domain BAA_2130 PF05525 Branched-chain amino acid transport protein BAA_2131 PF01588 Putative tRNA binding domain BAA_2134 PF07454 Stage II sporulation protein P (SpoIIP) BAA_2136 PF02557 D-alanyl-D-alanine carboxypeptidase BAA_2138 PF01425 Amidase BAA_2139 PF07690 Major Facilitator Superfamily BAA_2141 PF01145 SPFH domain / Band 7 family BAA_2142 PF00300 Histidine phosphatase superfamily (branch 1) BAA_2145 PF01168 Alanine racemase, N-terminal domain BAA_2145 PF00842 Alanine racemase, C-terminal domain BAA_2149 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BAA_2150 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BAA_2150 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BAA_2151 PF00392 Bacterial regulatory proteins, gntR family BAA_2151 PF00155 Aminotransferase class I and II BAA_2158 PF00583 Acetyltransferase (GNAT) family BAA_2167 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BAA_2172 PF01209 ubiE/COQ5 methyltransferase family BAA_2173 PF01268 Formate--tetrahydrofolate ligase BAA_2175 PF00270 DEAD/DEAH box helicase BAA_2175 PF00271 Helicase conserved C-terminal domain BAA_2176 PF01261 Xylose isomerase-like TIM barrel BAA_2177 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAA_2179 PF08240 Alcohol dehydrogenase GroES-like domain BAA_2179 PF00107 Zinc-binding dehydrogenase BAA_2180 PF04542 Sigma-70 region 2 BAA_2180 PF08281 Sigma-70, region 4 BAA_2185 PF00255 Glutathione peroxidase BAA_2186 PF13559 Domain of unknown function (DUF4129) BAA_2186 PF01841 Transglutaminase-like superfamily BAA_2186 PF11992 Domain of unknown function (DUF3488) BAA_2187 PF01882 Protein of unknown function DUF58 BAA_2188 PF07726 ATPase family associated with various cellular activities (AAA) BAA_2188 PF17863 AAA lid domain BAA_2191 PF14710 Respiratory nitrate reductase alpha N-terminal BAA_2191 PF01568 Molydopterin dinucleotide binding domain BAA_2191 PF00384 Molybdopterin oxidoreductase BAA_2192 PF14711 Respiratory nitrate reductase beta C-terminal BAA_2192 PF13247 4Fe-4S dicluster domain BAA_2193 PF02613 Nitrate reductase delta subunit BAA_2194 PF02665 Nitrate reductase gamma subunit BAA_2195 PF00155 Aminotransferase class I and II BAA_2195 PF00392 Bacterial regulatory proteins, gntR family BAA_2196 PF00005 ABC transporter BAA_2198 PF00027 Cyclic nucleotide-binding domain BAA_2198 PF00325 Bacterial regulatory proteins, crp family BAA_2199 PF04055 Radical SAM superfamily BAA_2199 PF06463 Molybdenum Cofactor Synthesis C BAA_2200 PF00899 ThiF family BAA_2201 PF00994 Probable molybdopterin binding domain BAA_2201 PF03454 MoeA C-terminal region (domain IV) BAA_2201 PF03453 MoeA N-terminal region (domain I and II) BAA_2202 PF02391 MoaE protein BAA_2204 PF07690 Major Facilitator Superfamily BAA_2208 PF01903 CbiX BAA_2209 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BAA_2210 PF00355 Rieske [2Fe-2S] domain BAA_2211 PF04324 BFD-like [2Fe-2S] binding domain BAA_2211 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BAA_2211 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAA_2211 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BAA_2211 PF18267 Rubredoxin NAD+ reductase C-terminal domain BAA_2212 PF01814 Hemerythrin HHE cation binding domain BAA_2212 PF04405 Domain of Unknown function (DUF542) BAA_2219 PF04232 Stage V sporulation protein S (SpoVS) BAA_2225 PF01966 HD domain BAA_2226 PF16326 ABC transporter C-terminal domain BAA_2226 PF12848 ABC transporter BAA_2226 PF00005 ABC transporter BAA_2229 PF00436 Single-strand binding protein family BAA_2230 PF00440 Bacterial regulatory proteins, tetR family BAA_2233 PF08712 Scaffold protein Nfu/NifU N terminal BAA_2233 PF13769 Virulence factor BAA_2235 PF06491 Disulphide isomerase BAA_2236 PF04445 Putative SAM-dependent methyltransferase BAA_2237 PF00750 tRNA synthetases class I (R) BAA_2237 PF05746 DALR anticodon binding domain BAA_2237 PF03485 Arginyl tRNA synthetase N terminal domain BAA_2243 PF08264 Anticodon-binding domain of tRNA BAA_2243 PF00133 tRNA synthetases class I (I, L, M and V) BAA_2247 PF01336 OB-fold nucleic acid binding domain BAA_2247 PF00152 tRNA synthetases class II (D, K and N) BAA_2251 PF01580 FtsK/SpoIIIE family BAA_2251 PF12538 DNA transporter BAA_2272 PF02595 Glycerate kinase family BAA_2273 PF00939 Sodium:sulfate symporter transmembrane region BAA_2274 PF00486 Transcriptional regulatory protein, C terminal BAA_2274 PF00072 Response regulator receiver domain BAA_2275 PF00672 HAMP domain BAA_2275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAA_2275 PF00512 His Kinase A (phospho-acceptor) domain BAA_2278 PF00209 Sodium:neurotransmitter symporter family BAA_2281 PF10997 Alternate to MurJ BAA_2282 PF13419 Haloacid dehalogenase-like hydrolase BAA_2284 PF00465 Iron-containing alcohol dehydrogenase BAA_2285 PF01177 Asp/Glu/Hydantoin racemase BAA_2286 PF01980 tRNA-methyltransferase O BAA_2287 PF00583 Acetyltransferase (GNAT) family BAA_2291 PF00005 ABC transporter BAA_2294 PF14005 YpjP-like protein BAA_2295 PF13419 Haloacid dehalogenase-like hydrolase BAA_2299 PF07930 D-aminopeptidase, domain B BAA_2299 PF00144 Beta-lactamase BAA_2300 PF00303 Thymidylate synthase BAA_2301 PF00186 Dihydrofolate reductase BAA_2302 PF05223 NTF2-like N-terminal transpeptidase domain BAA_2302 PF03717 Penicillin-binding Protein dimerisation domain BAA_2302 PF00905 Penicillin binding protein transpeptidase domain BAA_2303 PF02525 Flavodoxin-like fold BAA_2304 PF01553 Acyltransferase BAA_2305 PF03006 Haemolysin-III related BAA_2306 PF02416 mttA/Hcf106 family BAA_2307 PF00902 Sec-independent protein translocase protein (TatC) BAA_2309 PF02645 Uncharacterised protein, DegV family COG1307 BAA_2311 PF02630 SCO1/SenC BAA_2312 PF00011 Hsp20/alpha crystallin family BAA_2313 PF00733 Asparagine synthase BAA_2313 PF13537 Glutamine amidotransferase domain BAA_2317 PF01497 Periplasmic binding protein BAA_2318 PF01063 Amino-transferase class IV BAA_2319 PF00881 Nitroreductase family BAA_2324 PF00011 Hsp20/alpha crystallin family BAA_2325 PF00924 Mechanosensitive ion channel BAA_2326 PF07730 Histidine kinase BAA_2326 PF13185 GAF domain BAA_2327 PF00072 Response regulator receiver domain BAA_2327 PF00196 Bacterial regulatory proteins, luxR family BAA_2330 PF00107 Zinc-binding dehydrogenase BAA_2330 PF08240 Alcohol dehydrogenase GroES-like domain BAA_2341 PF03358 NADPH-dependent FMN reductase BAA_2344 PF00005 ABC transporter BAA_2344 PF00571 CBS domain BAA_2345 PF00528 Binding-protein-dependent transport system inner membrane component BAA_2346 PF13520 Amino acid permease BAA_2352 PF01595 Cyclin M transmembrane N-terminal domain BAA_2352 PF00571 CBS domain BAA_2352 PF03471 Transporter associated domain BAA_2353 PF00171 Aldehyde dehydrogenase family BAA_2354 PF07997 Protein of unknown function (DUF1694) BAA_2355 PF09385 Histidine kinase N terminal BAA_2358 PF00202 Aminotransferase class-III BAA_2359 PF01144 Coenzyme A transferase BAA_2360 PF01144 Coenzyme A transferase BAA_2361 PF01546 Peptidase family M20/M25/M40 BAA_2361 PF07687 Peptidase dimerisation domain BAA_2362 PF00583 Acetyltransferase (GNAT) family BAA_2363 PF13426 PAS domain BAA_2363 PF00158 Sigma-54 interaction domain BAA_2363 PF02954 Bacterial regulatory protein, Fis family BAA_2364 PF12544 Lysine-2,3-aminomutase BAA_2365 PF14122 YokU-like protein, putative antitoxin BAA_2366 PF06855 YozE SAM-like fold BAA_2369 PF14162 YozD-like protein BAA_2372 PF07070 SpoOM protein BAA_2373 PF01545 Cation efflux family BAA_2373 PF16916 Dimerisation domain of Zinc Transporter BAA_2374 PF01569 PAP2 superfamily BAA_2375 PF00085 Thioredoxin BAA_2378 PF14436 Bacterial EndoU nuclease BAA_2378 PF04740 LXG domain of WXG superfamily BAA_2381 PF04471 Restriction endonuclease BAA_2400 PF10676 Spore germination protein gerPA/gerPF BAA_2403 PF00912 Transglycosylase BAA_2403 PF00905 Penicillin binding protein transpeptidase domain BAA_2404 PF07690 Major Facilitator Superfamily BAA_2405 PF01521 Iron-sulphur cluster biosynthesis BAA_2406 PF00285 Citrate synthase, C-terminal domain BAA_2407 PF03972 MmgE/PrpD family BAA_2410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BAA_2410 PF02770 Acyl-CoA dehydrogenase, middle domain BAA_2410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BAA_2411 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BAA_2411 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BAA_2412 PF00171 Aldehyde dehydrogenase family BAA_2413 PF01810 LysE type translocator BAA_2414 PF00378 Enoyl-CoA hydratase/isomerase BAA_2416 PF10763 Protein of unknown function (DUF2584) BAA_2417 PF00149 Calcineurin-like phosphoesterase BAA_2417 PF12320 Type 5 capsule protein repressor C-terminal domain BAA_2418 PF13476 AAA domain BAA_2422 PF01022 Bacterial regulatory protein, arsR family BAA_2425 PF07690 Major Facilitator Superfamily BAA_2426 PF00106 short chain dehydrogenase BAA_2427 PF00425 chorismate binding enzyme BAA_2428 PF00501 AMP-binding enzyme BAA_2428 PF13193 AMP-binding enzyme C-terminal domain BAA_2429 PF00857 Isochorismatase family BAA_2429 PF00550 Phosphopantetheine attachment site BAA_2430 PF00550 Phosphopantetheine attachment site BAA_2430 PF00975 Thioesterase domain BAA_2430 PF13193 AMP-binding enzyme C-terminal domain BAA_2430 PF00501 AMP-binding enzyme BAA_2430 PF00668 Condensation domain BAA_2431 PF03621 MbtH-like protein BAA_2432 PF07690 Major Facilitator Superfamily BAA_2435 PF00216 Bacterial DNA-binding protein BAA_2437 PF05163 DinB family BAA_2438 PF00082 Subtilase family BAA_2439 PF01235 Sodium:alanine symporter family BAA_2443 PF16291 Domain of unknown function (DUF4937 BAA_2444 PF01479 S4 domain BAA_2444 PF00849 RNA pseudouridylate synthase BAA_2446 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BAA_2446 PF02824 TGS domain BAA_2446 PF03129 Anticodon binding domain BAA_2446 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BAA_2450 PF12146 Serine aminopeptidase, S33 BAA_2451 PF07690 Major Facilitator Superfamily BAA_2456 PF13649 Methyltransferase domain BAA_2464 PF16123 Hydroxyacylglutathione hydrolase C-terminus BAA_2464 PF00753 Metallo-beta-lactamase superfamily BAA_2466 PF03176 MMPL family BAA_2468 PF00302 Chloramphenicol acetyltransferase BAA_2471 PF00583 Acetyltransferase (GNAT) family BAA_2479 PF13302 Acetyltransferase (GNAT) domain BAA_2481 PF00313 'Cold-shock' DNA-binding domain BAA_2493 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAA_2493 PF03466 LysR substrate binding domain BAA_2494 PF01118 Semialdehyde dehydrogenase, NAD binding domain BAA_2494 PF02774 Semialdehyde dehydrogenase, dimerisation domain BAA_2497 PF03466 LysR substrate binding domain BAA_2497 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAA_2498 PF03475 3-alpha domain BAA_2498 PF03473 MOSC domain BAA_2501 PF00664 ABC transporter transmembrane region BAA_2501 PF00005 ABC transporter BAA_2502 PF00664 ABC transporter transmembrane region BAA_2502 PF00005 ABC transporter BAA_2504 PF01810 LysE type translocator BAA_2505 PF01381 Helix-turn-helix BAA_2505 PF07883 Cupin domain BAA_2510 PF00890 FAD binding domain BAA_2511 PF12680 SnoaL-like domain BAA_2511 PF08281 Sigma-70, region 4 BAA_2511 PF04542 Sigma-70 region 2 BAA_2520 PF02378 Phosphotransferase system, EIIC BAA_2522 PF03702 Anhydro-N-acetylmuramic acid kinase BAA_2523 PF01869 BadF/BadG/BcrA/BcrD ATPase family BAA_2524 PF02660 Glycerol-3-phosphate acyltransferase BAA_2525 PF00266 Aminotransferase class-V BAA_2526 PF00291 Pyridoxal-phosphate dependent enzyme BAA_2528 PF00753 Metallo-beta-lactamase superfamily BAA_2528 PF16123 Hydroxyacylglutathione hydrolase C-terminus BAA_2531 PF00271 Helicase conserved C-terminal domain BAA_2531 PF00270 DEAD/DEAH box helicase BAA_2535 PF17932 Tetracyclin repressor-like, C-terminal domain BAA_2535 PF00440 Bacterial regulatory proteins, tetR family BAA_2538 PF12704 MacB-like periplasmic core domain BAA_2538 PF00005 ABC transporter BAA_2538 PF02687 FtsX-like permease family BAA_2539 PF09313 Domain of unknown function (DUF1971) BAA_2539 PF03848 Tellurite resistance protein TehB BAA_2541 PF08241 Methyltransferase domain BAA_2542 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BAA_2542 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BAA_2542 PF00205 Thiamine pyrophosphate enzyme, central domain BAA_2543 PF12802 MarR family BAA_2544 PF00300 Histidine phosphatase superfamily (branch 1) BAA_2546 PF14171 Toxin SpoIISA, type II toxin-antitoxin system BAA_2553 PF07687 Peptidase dimerisation domain BAA_2553 PF01546 Peptidase family M20/M25/M40 BAA_2557 PF04542 Sigma-70 region 2 BAA_2557 PF08281 Sigma-70, region 4 BAA_2559 PF03717 Penicillin-binding Protein dimerisation domain BAA_2559 PF00905 Penicillin binding protein transpeptidase domain BAA_2564 PF01569 PAP2 superfamily BAA_2565 PF00356 Bacterial regulatory proteins, lacI family BAA_2566 PF07690 Major Facilitator Superfamily BAA_2567 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BAA_2567 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BAA_2568 PF00294 pfkB family carbohydrate kinase BAA_2569 PF00171 Aldehyde dehydrogenase family BAA_2571 PF00205 Thiamine pyrophosphate enzyme, central domain BAA_2571 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BAA_2571 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BAA_2574 PF01116 Fructose-bisphosphate aldolase class-II BAA_2575 PF04962 KduI/IolB family BAA_2582 PF18801 response regulator aspartate phosphatase H, N terminal BAA_2583 PF01381 Helix-turn-helix BAA_2585 PF02557 D-alanyl-D-alanine carboxypeptidase BAA_2587 PF00395 S-layer homology domain BAA_2587 PF01520 N-acetylmuramoyl-L-alanine amidase BAA_2590 PF00440 Bacterial regulatory proteins, tetR family BAA_2593 PF00563 EAL domain BAA_2593 PF00990 Diguanylate cyclase, GGDEF domain BAA_2593 PF03707 Bacterial signalling protein N terminal repeat BAA_2594 PF13302 Acetyltransferase (GNAT) domain BAA_2597 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAA_2598 PF00581 Rhodanese-like domain BAA_2601 PF00005 ABC transporter BAA_2603 PF08359 YsiA-like protein, C-terminal region BAA_2603 PF00440 Bacterial regulatory proteins, tetR family BAA_2606 PF02770 Acyl-CoA dehydrogenase, middle domain BAA_2606 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BAA_2606 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BAA_2607 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BAA_2607 PF02785 Biotin carboxylase C-terminal domain BAA_2607 PF00289 Biotin carboxylase, N-terminal domain BAA_2608 PF00364 Biotin-requiring enzyme BAA_2609 PF00682 HMGL-like BAA_2610 PF00378 Enoyl-CoA hydratase/isomerase BAA_2611 PF01039 Carboxyl transferase domain BAA_2612 PF00501 AMP-binding enzyme BAA_2612 PF16177 Acetyl-coenzyme A synthetase N-terminus BAA_2612 PF13193 AMP-binding enzyme C-terminal domain BAA_2614 PF00583 Acetyltransferase (GNAT) family BAA_2615 PF00485 Phosphoribulokinase / Uridine kinase family BAA_2617 PF05163 DinB family BAA_2618 PF00768 D-alanyl-D-alanine carboxypeptidase BAA_2618 PF07943 Penicillin-binding protein 5, C-terminal domain BAA_2619 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAA_2619 PF00512 His Kinase A (phospho-acceptor) domain BAA_2620 PF00072 Response regulator receiver domain BAA_2620 PF00486 Transcriptional regulatory protein, C terminal BAA_2621 PF01966 HD domain BAA_2623 PF01048 Phosphorylase superfamily BAA_2632 PF17755 UvrA DNA-binding domain BAA_2632 PF17760 UvrA interaction domain BAA_2632 PF17755 UvrA DNA-binding domain BAA_2632 PF17760 UvrA interaction domain BAA_2635 PF00144 Beta-lactamase BAA_2636 PF00376 MerR family regulatory protein BAA_2636 PF09278 MerR, DNA binding BAA_2637 PF07690 Major Facilitator Superfamily BAA_2641 PF01636 Phosphotransferase enzyme family BAA_2642 PF12833 Helix-turn-helix domain BAA_2645 PF00392 Bacterial regulatory proteins, gntR family BAA_2645 PF00155 Aminotransferase class I and II BAA_2648 PF08240 Alcohol dehydrogenase GroES-like domain BAA_2648 PF00107 Zinc-binding dehydrogenase BAA_2655 PF07486 Cell Wall Hydrolase BAA_2657 PF00486 Transcriptional regulatory protein, C terminal BAA_2657 PF00072 Response regulator receiver domain BAA_2665 PF00005 ABC transporter BAA_2671 PF00742 Homoserine dehydrogenase BAA_2671 PF03447 Homoserine dehydrogenase, NAD binding domain BAA_2671 PF01842 ACT domain BAA_2672 PF00155 Aminotransferase class I and II BAA_2672 PF00392 Bacterial regulatory proteins, gntR family BAA_2673 PF07478 D-ala D-ala ligase C-terminus BAA_2673 PF01820 D-ala D-ala ligase N-terminus BAA_2675 PF03070 TENA/THI-4/PQQC family BAA_2693 PF00067 Cytochrome P450 BAA_2695 PF00132 Bacterial transferase hexapeptide (six repeats) BAA_2696 PF07561 Domain of Unknown Function (DUF1540) BAA_2698 PF00067 Cytochrome P450 BAA_2704 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BAA_2705 PF01177 Asp/Glu/Hydantoin racemase BAA_2707 PF07155 ECF-type riboflavin transporter, S component BAA_2708 PF12558 ATP-binding cassette cobalt transporter BAA_2708 PF00005 ABC transporter BAA_2710 PF09680 Family of unknown function BAA_2711 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAA_2711 PF00512 His Kinase A (phospho-acceptor) domain BAA_2714 PF08240 Alcohol dehydrogenase GroES-like domain BAA_2714 PF00107 Zinc-binding dehydrogenase BAA_2717 PF11954 Domain of unknown function (DUF3471) BAA_2717 PF00144 Beta-lactamase BAA_2723 PF01965 DJ-1/PfpI family BAA_2726 PF00144 Beta-lactamase BAA_2728 PF07690 Major Facilitator Superfamily BAA_2731 PF03009 Glycerophosphoryl diester phosphodiesterase family BAA_2736 PF00892 EamA-like transporter family BAA_2737 PF01270 Glycosyl hydrolases family 8 BAA_2740 PF00293 NUDIX domain BAA_2744 PF07690 Major Facilitator Superfamily BAA_2747 PF09297 NADH pyrophosphatase zinc ribbon domain BAA_2747 PF00293 NUDIX domain BAA_2748 PF00712 DNA polymerase III beta subunit, N-terminal domain BAA_2748 PF02767 DNA polymerase III beta subunit, central domain BAA_2748 PF02768 DNA polymerase III beta subunit, C-terminal domain BAA_2749 PF00293 NUDIX domain BAA_2752 PF12706 Beta-lactamase superfamily domain BAA_2756 PF09234 Domain of unknown function (DUF1963) BAA_2762 PF08000 Bacterial PH domain BAA_2764 PF12867 DinB superfamily BAA_2770 PF01541 GIY-YIG catalytic domain BAA_2779 PF01266 FAD dependent oxidoreductase BAA_2784 PF13419 Haloacid dehalogenase-like hydrolase BAA_2789 PF00282 Pyridoxal-dependent decarboxylase conserved domain BAA_2793 PF03714 Bacterial pullanase-associated domain BAA_2793 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BAA_2793 PF00128 Alpha amylase, catalytic domain BAA_2794 PF03413 Peptidase propeptide and YPEB domain BAA_2794 PF01447 Thermolysin metallopeptidase, catalytic domain BAA_2794 PF02868 Thermolysin metallopeptidase, alpha-helical domain BAA_2794 PF07504 Fungalysin/Thermolysin Propeptide Motif BAA_2798 PF00344 SecY translocase BAA_2799 PF11638 DnaA N-terminal domain BAA_2799 PF00308 Bacterial dnaA protein BAA_2799 PF08299 Bacterial dnaA protein helix-turn-helix BAA_2800 PF00892 EamA-like transporter family BAA_2801 PF00392 Bacterial regulatory proteins, gntR family BAA_2801 PF00155 Aminotransferase class I and II BAA_2802 PF00561 alpha/beta hydrolase fold BAA_2807 PF06081 Aromatic acid exporter family member 1 BAA_2810 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BAA_2811 PF03413 Peptidase propeptide and YPEB domain BAA_2811 PF14620 YpeB sporulation BAA_2812 PF07486 Cell Wall Hydrolase BAA_2812 PF01471 Putative peptidoglycan binding domain BAA_2815 PF03301 Tryptophan 2,3-dioxygenase BAA_2816 PF04199 Putative cyclase BAA_2817 PF00266 Aminotransferase class-V BAA_2818 PF08359 YsiA-like protein, C-terminal region BAA_2818 PF00440 Bacterial regulatory proteins, tetR family BAA_2819 PF13344 Haloacid dehalogenase-like hydrolase BAA_2819 PF00293 NUDIX domain BAA_2824 PF02954 Bacterial regulatory protein, Fis family BAA_2824 PF00158 Sigma-54 interaction domain BAA_2824 PF01590 GAF domain BAA_2827 PF13302 Acetyltransferase (GNAT) domain BAA_2828 PF08220 DeoR-like helix-turn-helix domain BAA_2828 PF00455 DeoR C terminal sensor domain BAA_2831 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAA_2831 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BAA_2831 PF00403 Heavy-metal-associated domain BAA_2832 PF02082 Transcriptional regulator BAA_2836 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAA_2836 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BAA_2837 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BAA_2837 PF02817 e3 binding domain BAA_2837 PF00364 Biotin-requiring enzyme BAA_2838 PF02780 Transketolase, C-terminal domain BAA_2838 PF02779 Transketolase, pyrimidine binding domain BAA_2839 PF00676 Dehydrogenase E1 component BAA_2842 PF00106 short chain dehydrogenase BAA_2843 PF04229 GrpB protein BAA_2843 PF13673 Acetyltransferase (GNAT) domain BAA_2848 PF00528 Binding-protein-dependent transport system inner membrane component BAA_2849 PF00571 CBS domain BAA_2849 PF00005 ABC transporter BAA_2850 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BAA_2851 PF00574 Clp protease BAA_2854 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BAA_2855 PF13673 Acetyltransferase (GNAT) domain BAA_2856 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading BAA_2856 PF18416 N-acetylglucosamine binding protein domain 2 BAA_2860 PF10990 Protein of unknown function (DUF2809) BAA_2866 PF13567 Domain of unknown function (DUF4131) BAA_2866 PF03772 Competence protein BAA_2866 PF00753 Metallo-beta-lactamase superfamily BAA_2877 PF13538 UvrD-like helicase C-terminal domain BAA_2880 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like BAA_2881 PF09382 RQC domain BAA_2881 PF16124 RecQ zinc-binding BAA_2881 PF00270 DEAD/DEAH box helicase BAA_2881 PF00271 Helicase conserved C-terminal domain BAA_2881 PF00570 HRDC domain BAA_2888 PF01368 DHH family BAA_2888 PF02833 DHHA2 domain BAA_2889 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading BAA_2889 PF18416 N-acetylglucosamine binding protein domain 2 BAA_2891 PF02627 Carboxymuconolactone decarboxylase family BAA_2892 PF01235 Sodium:alanine symporter family BAA_2893 PF00171 Aldehyde dehydrogenase family BAA_2894 PF00701 Dihydrodipicolinate synthetase family BAA_2895 PF05544 Proline racemase BAA_2896 PF05544 Proline racemase BAA_2897 PF01266 FAD dependent oxidoreductase BAA_2898 PF00158 Sigma-54 interaction domain BAA_2898 PF13188 PAS domain BAA_2898 PF02954 Bacterial regulatory protein, Fis family BAA_2901 PF04324 BFD-like [2Fe-2S] binding domain BAA_2901 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAA_2904 PF08876 Domain of unknown function (DUF1836) BAA_2905 PF09335 SNARE associated Golgi protein BAA_2908 PF04914 DltD protein BAA_2909 PF00958 GMP synthase C terminal domain BAA_2909 PF03352 Methyladenine glycosylase BAA_2909 PF13302 Acetyltransferase (GNAT) domain BAA_2909 PF00117 Glutamine amidotransferase class-I BAA_2909 PF13673 Acetyltransferase (GNAT) domain BAA_2910 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAA_2911 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain BAA_2911 PF00877 NlpC/P60 family BAA_2912 PF13378 Enolase C-terminal domain-like BAA_2912 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BAA_2915 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BAA_2920 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BAA_2920 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BAA_2921 PF00989 PAS fold BAA_2921 PF00512 His Kinase A (phospho-acceptor) domain BAA_2921 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAA_2921 PF16736 Single Cache-like BAA_2928 PF03808 Glycosyl transferase WecB/TagA/CpsF family BAA_2932 PF02645 Uncharacterised protein, DegV family COG1307 BAA_2936 PF07690 Major Facilitator Superfamily BAA_2938 PF04519 Polymer-forming cytoskeletal BAA_2939 PF13171 Protein of unknown function (DUF4004) BAA_2940 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAA_2940 PF12793 Sugar transport-related sRNA regulator N-term BAA_2941 PF07690 Major Facilitator Superfamily BAA_2946 PF04226 Transglycosylase associated protein BAA_2947 PF01156 Inosine-uridine preferring nucleoside hydrolase BAA_2955 PF00155 Aminotransferase class I and II BAA_2956 PF07977 FabA-like domain BAA_2957 PF03630 Fumble BAA_2971 PF01594 AI-2E family transporter BAA_2973 PF00296 Luciferase-like monooxygenase BAA_2974 PF00528 Binding-protein-dependent transport system inner membrane component BAA_2975 PF09084 NMT1/THI5 like BAA_2976 PF00005 ABC transporter BAA_2984 PF02522 Aminoglycoside 3-N-acetyltransferase BAA_2989 PF13536 Putative multidrug resistance efflux transporter BAA_2990 PF12867 DinB superfamily BAA_2994 PF08713 DNA alkylation repair enzyme BAA_2997 PF01522 Polysaccharide deacetylase BAA_2999 PF03741 Integral membrane protein TerC family BAA_3000 PF00884 Sulfatase BAA_3001 PF12848 ABC transporter BAA_3001 PF00005 ABC transporter BAA_3006 PF16295 Tetracyclin repressor-like, C-terminal domain BAA_3006 PF00440 Bacterial regulatory proteins, tetR family BAA_3008 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BAA_3009 PF02153 Prephenate dehydrogenase BAA_3009 PF01842 ACT domain BAA_3010 PF00155 Aminotransferase class I and II BAA_3011 PF01264 Chorismate synthase BAA_3012 PF01817 Chorismate mutase type II BAA_3012 PF00793 DAHP synthetase I family BAA_3017 PF01636 Phosphotransferase enzyme family BAA_3020 PF06725 3D domain BAA_3020 PF01476 LysM domain BAA_3022 PF08281 Sigma-70, region 4 BAA_3022 PF04542 Sigma-70 region 2 BAA_3026 PF06039 Malate:quinone oxidoreductase (Mqo) BAA_3027 PF13407 Periplasmic binding protein domain BAA_3028 PF02653 Branched-chain amino acid transport system / permease component BAA_3029 PF02653 Branched-chain amino acid transport system / permease component BAA_3032 PF04198 Putative sugar-binding domain BAA_3032 PF00325 Bacterial regulatory proteins, crp family BAA_3036 PF01791 DeoC/LacD family aldolase BAA_3041 PF03992 Antibiotic biosynthesis monooxygenase BAA_3045 PF01773 Na+ dependent nucleoside transporter N-terminus BAA_3045 PF07662 Na+ dependent nucleoside transporter C-terminus BAA_3046 PF00171 Aldehyde dehydrogenase family BAA_3047 PF01472 PUA domain BAA_3047 PF00696 Amino acid kinase family BAA_3048 PF14748 Pyrroline-5-carboxylate reductase dimerisation BAA_3048 PF03807 NADP oxidoreductase coenzyme F420-dependent BAA_3049 PF01546 Peptidase family M20/M25/M40 BAA_3050 PF09339 IclR helix-turn-helix domain BAA_3050 PF01614 Bacterial transcriptional regulator BAA_3051 PF00324 Amino acid permease BAA_3052 PF01139 tRNA-splicing ligase RtcB BAA_3054 PF00245 Alkaline phosphatase BAA_3055 PF11188 Protein of unknown function (DUF2975) BAA_3056 PF13443 Cro/C1-type HTH DNA-binding domain BAA_3059 PF10086 YhfC intramembrane metalloprotease BAA_3061 PF00072 Response regulator receiver domain BAA_3061 PF04397 LytTr DNA-binding domain BAA_3063 PF13302 Acetyltransferase (GNAT) domain BAA_3064 PF12681 Glyoxalase-like domain BAA_3068 PF07726 ATPase family associated with various cellular activities (AAA) BAA_3068 PF17863 AAA lid domain BAA_3071 PF07690 Major Facilitator Superfamily BAA_3072 PF00535 Glycosyl transferase family 2 BAA_3076 PF00535 Glycosyl transferase family 2 BAA_3079 PF00202 Aminotransferase class-III BAA_3080 PF06628 Catalase-related immune-responsive BAA_3080 PF00199 Catalase BAA_3082 PF13382 Adenine deaminase C-terminal domain BAA_3082 PF01979 Amidohydrolase family BAA_3083 PF00144 Beta-lactamase BAA_3088 PF07726 ATPase family associated with various cellular activities (AAA) BAA_3088 PF17863 AAA lid domain BAA_3090 PF00881 Nitroreductase family BAA_3091 PF01047 MarR family BAA_3092 PF14492 Elongation Factor G, domain II BAA_3092 PF03764 Elongation factor G, domain IV BAA_3092 PF00679 Elongation factor G C-terminus BAA_3092 PF00009 Elongation factor Tu GTP binding domain BAA_3094 PF00293 NUDIX domain BAA_3099 PF00005 ABC transporter BAA_3100 PF00392 Bacterial regulatory proteins, gntR family BAA_3102 PF12704 MacB-like periplasmic core domain BAA_3102 PF02687 FtsX-like permease family BAA_3102 PF00005 ABC transporter BAA_3107 PF12833 Helix-turn-helix domain BAA_3108 PF00583 Acetyltransferase (GNAT) family BAA_3111 PF00892 EamA-like transporter family BAA_3112 PF00155 Aminotransferase class I and II BAA_3112 PF00392 Bacterial regulatory proteins, gntR family BAA_3113 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BAA_3114 PF13031 Protein of unknown function (DUF3892) BAA_3116 PF00672 HAMP domain BAA_3116 PF00512 His Kinase A (phospho-acceptor) domain BAA_3117 PF00072 Response regulator receiver domain BAA_3117 PF00486 Transcriptional regulatory protein, C terminal BAA_3118 PF00561 alpha/beta hydrolase fold BAA_3124 PF01925 Sulfite exporter TauE/SafE BAA_3125 PF13302 Acetyltransferase (GNAT) domain BAA_3127 PF00324 Amino acid permease BAA_3129 PF08713 DNA alkylation repair enzyme BAA_3130 PF10898 Protein of unknown function (DUF2716) BAA_3136 PF10502 Signal peptidase, peptidase S26 BAA_3140 PF02146 Sir2 family BAA_3141 PF01470 Pyroglutamyl peptidase BAA_3146 PF03746 LamB/YcsF family BAA_3148 PF02682 Carboxyltransferase domain, subdomain C and D BAA_3149 PF09339 IclR helix-turn-helix domain BAA_3149 PF01614 Bacterial transcriptional regulator BAA_3150 PF10502 Signal peptidase, peptidase S26 BAA_3151 PF03932 CutC family BAA_3152 PF07454 Stage II sporulation protein P (SpoIIP) BAA_3155 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BAA_3155 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BAA_3155 PF02770 Acyl-CoA dehydrogenase, middle domain BAA_3162 PF02915 Rubrerythrin BAA_3164 PF00440 Bacterial regulatory proteins, tetR family BAA_3165 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BAA_3165 PF00391 PEP-utilising enzyme, mobile domain BAA_3167 PF00753 Metallo-beta-lactamase superfamily BAA_3170 PF07875 Coat F domain BAA_3171 PF08892 YqcI/YcgG family BAA_3172 PF01810 LysE type translocator BAA_3176 PF00269 Small, acid-soluble spore proteins, alpha/beta type BAA_3177 PF10710 Protein of unknown function (DUF2512) BAA_3178 PF11553 Protein of unknown function (DUF3231) BAA_3179 PF00269 Small, acid-soluble spore proteins, alpha/beta type BAA_3180 PF13823 Alcohol dehydrogenase GroES-associated BAA_3180 PF08240 Alcohol dehydrogenase GroES-like domain BAA_3180 PF00107 Zinc-binding dehydrogenase BAA_3183 PF00206 Lyase BAA_3183 PF10415 Fumarase C C-terminus BAA_3184 PF00710 Asparaginase, N-terminal BAA_3184 PF17763 Glutaminase/Asparaginase C-terminal domain BAA_3185 PF01381 Helix-turn-helix BAA_3187 PF02151 UvrB/uvrC motif BAA_3187 PF08459 UvrC Helix-hairpin-helix N-terminal BAA_3187 PF01541 GIY-YIG catalytic domain BAA_3187 PF12826 Helix-hairpin-helix motif BAA_3188 PF13520 Amino acid permease BAA_3189 PF05525 Branched-chain amino acid transport protein BAA_3190 PF03807 NADP oxidoreductase coenzyme F420-dependent BAA_3190 PF14748 Pyrroline-5-carboxylate reductase dimerisation BAA_3191 PF13564 DoxX-like family BAA_3192 PF03949 Malic enzyme, NAD binding domain BAA_3192 PF00390 Malic enzyme, N-terminal domain BAA_3199 PF03323 Bacillus/Clostridium GerA spore germination protein BAA_3202 PF08664 YcbB domain BAA_3202 PF00072 Response regulator receiver domain BAA_3205 PF04960 Glutaminase BAA_3213 PF00149 Calcineurin-like phosphoesterase BAA_3213 PF02872 5'-nucleotidase, C-terminal domain BAA_3213 PF17936 Bacterial Ig domain BAA_3214 PF06628 Catalase-related immune-responsive BAA_3214 PF00199 Catalase BAA_3215 PF00561 alpha/beta hydrolase fold BAA_3216 PF00857 Isochorismatase family BAA_3220 PF03466 LysR substrate binding domain BAA_3220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAA_3226 PF11181 Heat induced stress protein YflT BAA_3229 PF03073 TspO/MBR family BAA_3230 PF03441 FAD binding domain of DNA photolyase BAA_3230 PF00875 DNA photolyase BAA_3232 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) BAA_3233 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BAA_3233 PF00361 Proton-conducting membrane transporter BAA_3234 PF10057 Uncharacterized conserved protein (DUF2294) BAA_3236 PF01040 UbiA prenyltransferase family BAA_3237 PF00561 alpha/beta hydrolase fold BAA_3238 PF01297 Zinc-uptake complex component A periplasmic BAA_3239 PF00950 ABC 3 transport family BAA_3240 PF00005 ABC transporter BAA_3245 PF01451 Low molecular weight phosphotyrosine protein phosphatase BAA_3246 PF01758 Sodium Bile acid symporter family BAA_3247 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAA_3248 PF01022 Bacterial regulatory protein, arsR family BAA_3251 PF00012 Hsp70 protein BAA_3254 PF01037 Lrp/AsnC ligand binding domain BAA_3258 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAA_3260 PF01609 Transposase DDE domain BAA_3264 PF00144 Beta-lactamase BAA_3268 PF12802 MarR family BAA_3269 PF00667 FAD binding domain BAA_3269 PF00258 Flavodoxin BAA_3269 PF00175 Oxidoreductase NAD-binding domain BAA_3269 PF00067 Cytochrome P450 BAA_3271 PF07690 Major Facilitator Superfamily BAA_3276 PF00072 Response regulator receiver domain BAA_3276 PF00486 Transcriptional regulatory protein, C terminal BAA_3277 PF00512 His Kinase A (phospho-acceptor) domain BAA_3277 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAA_3277 PF00672 HAMP domain BAA_3282 PF00291 Pyridoxal-phosphate dependent enzyme BAA_3288 PF01381 Helix-turn-helix BAA_3291 PF00753 Metallo-beta-lactamase superfamily BAA_3292 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family BAA_3294 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BAA_3294 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BAA_3295 PF04072 Leucine carboxyl methyltransferase BAA_3298 PF00005 ABC transporter BAA_3299 PF02687 FtsX-like permease family BAA_3302 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAA_3302 PF00512 His Kinase A (phospho-acceptor) domain BAA_3302 PF00672 HAMP domain BAA_3303 PF00486 Transcriptional regulatory protein, C terminal BAA_3303 PF00072 Response regulator receiver domain BAA_3305 PF01047 MarR family BAA_3308 PF04299 Putative FMN-binding domain BAA_3309 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BAA_3309 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BAA_3310 PF07690 Major Facilitator Superfamily BAA_3311 PF02589 LUD domain BAA_3312 PF02589 LUD domain BAA_3312 PF13183 4Fe-4S dicluster domain BAA_3312 PF11870 Domain of unknown function (DUF3390) BAA_3313 PF02754 Cysteine-rich domain BAA_3314 PF03466 LysR substrate binding domain BAA_3314 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAA_3316 PF17676 LD-carboxypeptidase C-terminal domain BAA_3316 PF02016 LD-carboxypeptidase N-terminal domain BAA_3319 PF07690 Major Facilitator Superfamily BAA_3320 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BAA_3320 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BAA_3321 PF05116 Sucrose-6F-phosphate phosphohydrolase BAA_3324 PF00356 Bacterial regulatory proteins, lacI family BAA_3325 PF18801 response regulator aspartate phosphatase H, N terminal BAA_3329 PF00817 impB/mucB/samB family BAA_3329 PF11799 impB/mucB/samB family C-terminal domain BAA_3329 PF11798 IMS family HHH motif BAA_3332 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAA_3332 PF02743 Cache domain BAA_3332 PF00672 HAMP domain BAA_3336 PF01554 MatE BAA_3338 PF01752 Collagenase BAA_3338 PF08453 Peptidase family M9 N-terminal BAA_3338 PF18496 Collagenase G catalytic helper subdomain BAA_3340 PF07690 Major Facilitator Superfamily BAA_3341 PF16859 Tetracyclin repressor-like, C-terminal domain BAA_3341 PF00440 Bacterial regulatory proteins, tetR family BAA_3342 PF01022 Bacterial regulatory protein, arsR family BAA_3344 PF03313 Serine dehydratase alpha chain BAA_3345 PF01842 ACT domain BAA_3345 PF03315 Serine dehydratase beta chain BAA_3347 PF00202 Aminotransferase class-III BAA_3348 PF01300 Telomere recombination BAA_3348 PF07503 HypF finger BAA_3348 PF00708 Acylphosphatase BAA_3348 PF17788 HypF Kae1-like domain BAA_3349 PF00586 AIR synthase related protein, N-terminal domain BAA_3349 PF02769 AIR synthase related protein, C-terminal domain BAA_3350 PF00857 Isochorismatase family BAA_3351 PF01037 Lrp/AsnC ligand binding domain BAA_3352 PF13520 Amino acid permease BAA_3355 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BAA_3355 PF01842 ACT domain BAA_3355 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BAA_3356 PF00266 Aminotransferase class-V BAA_3359 PF04542 Sigma-70 region 2 BAA_3359 PF08281 Sigma-70, region 4 BAA_3362 PF07883 Cupin domain BAA_3363 PF01497 Periplasmic binding protein BAA_3363 PF12833 Helix-turn-helix domain BAA_3365 PF01804 Penicillin amidase BAA_3374 PF14044 NETI protein BAA_3375 PF07690 Major Facilitator Superfamily BAA_3376 PF12697 Alpha/beta hydrolase family BAA_3377 PF01047 MarR family BAA_3378 PF07690 Major Facilitator Superfamily BAA_3381 PF12679 ABC-2 family transporter protein BAA_3382 PF00005 ABC transporter BAA_3382 PF13732 Domain of unknown function (DUF4162) BAA_3383 PF13396 Phospholipase_D-nuclease N-terminal BAA_3386 PF17314 Family of unknown function (DUF5360) BAA_3387 PF00893 Small Multidrug Resistance protein BAA_3388 PF00440 Bacterial regulatory proteins, tetR family BAA_3389 PF17440 Thiol-activated cytolysin beta sandwich domain BAA_3389 PF01289 Thiol-activated cytolysin BAA_3390 PF02667 Short chain fatty acid transporter BAA_3392 PF02525 Flavodoxin-like fold BAA_3397 PF14256 YwiC-like protein BAA_3399 PF00005 ABC transporter BAA_3400 PF02361 Cobalt transport protein BAA_3403 PF03737 Aldolase/RraA BAA_3404 PF03606 C4-dicarboxylate anaerobic carrier BAA_3405 PF04231 Endonuclease I BAA_3408 PF01381 Helix-turn-helix BAA_3409 PF02660 Glycerol-3-phosphate acyltransferase BAA_3410 PF04073 Aminoacyl-tRNA editing domain BAA_3411 PF13393 Histidyl-tRNA synthetase BAA_3411 PF03129 Anticodon binding domain BAA_3414 PF01638 HxlR-like helix-turn-helix BAA_3415 PF00881 Nitroreductase family BAA_3417 PF02887 Pyruvate kinase, alpha/beta domain BAA_3417 PF00224 Pyruvate kinase, barrel domain BAA_3417 PF00391 PEP-utilising enzyme, mobile domain BAA_3421 PF00005 ABC transporter BAA_3426 PF13419 Haloacid dehalogenase-like hydrolase BAA_3433 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAA_3434 PF00480 ROK family BAA_3435 PF07690 Major Facilitator Superfamily BAA_3436 PF14602 Hexapeptide repeat of succinyl-transferase BAA_3436 PF12464 Maltose acetyltransferase BAA_3439 PF00005 ABC transporter BAA_3441 PF00579 tRNA synthetases class I (W and Y) BAA_3442 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BAA_3442 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BAA_3442 PF13288 DXP reductoisomerase C-terminal domain BAA_3443 PF01594 AI-2E family transporter BAA_3448 PF08241 Methyltransferase domain BAA_3450 PF07690 Major Facilitator Superfamily BAA_3454 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BAA_3456 PF01595 Cyclin M transmembrane N-terminal domain BAA_3456 PF00571 CBS domain BAA_3456 PF03471 Transporter associated domain BAA_3457 PF13411 MerR HTH family regulatory protein BAA_3458 PF00892 EamA-like transporter family BAA_3459 PF00805 Pentapeptide repeats (8 copies) BAA_3460 PF06906 Protein of unknown function (DUF1272) BAA_3461 PF10282 Lactonase, 7-bladed beta-propeller BAA_3462 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BAA_3462 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BAA_3463 PF02447 GntP family permease BAA_3464 PF00923 Transaldolase/Fructose-6-phosphate aldolase BAA_3465 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BAA_3465 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BAA_3466 PF02780 Transketolase, C-terminal domain BAA_3466 PF02779 Transketolase, pyrimidine binding domain BAA_3466 PF00456 Transketolase, thiamine diphosphate binding domain BAA_3467 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BAA_3467 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BAA_3468 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BAA_3468 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BAA_3469 PF08240 Alcohol dehydrogenase GroES-like domain BAA_3469 PF00107 Zinc-binding dehydrogenase BAA_3470 PF00296 Luciferase-like monooxygenase BAA_3472 PF08659 KR domain BAA_3472 PF02801 Beta-ketoacyl synthase, C-terminal domain BAA_3472 PF00550 Phosphopantetheine attachment site BAA_3472 PF08240 Alcohol dehydrogenase GroES-like domain BAA_3472 PF00109 Beta-ketoacyl synthase, N-terminal domain BAA_3472 PF00698 Acyl transferase domain BAA_3472 PF14765 Polyketide synthase dehydratase BAA_3472 PF16197 Ketoacyl-synthetase C-terminal extension BAA_3472 PF00107 Zinc-binding dehydrogenase BAA_3473 PF00106 short chain dehydrogenase BAA_3474 PF03413 Peptidase propeptide and YPEB domain BAA_3474 PF01447 Thermolysin metallopeptidase, catalytic domain BAA_3474 PF02868 Thermolysin metallopeptidase, alpha-helical domain BAA_3474 PF07504 Fungalysin/Thermolysin Propeptide Motif BAA_3478 PF00248 Aldo/keto reductase family BAA_3479 PF07690 Major Facilitator Superfamily BAA_3481 PF03928 Haem-degrading BAA_3482 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAA_3488 PF03960 ArsC family BAA_3489 PF01638 HxlR-like helix-turn-helix BAA_3490 PF07702 UTRA domain BAA_3490 PF00392 Bacterial regulatory proteins, gntR family BAA_3494 PF01638 HxlR-like helix-turn-helix BAA_3495 PF01638 HxlR-like helix-turn-helix BAA_3496 PF00248 Aldo/keto reductase family BAA_3502 PF02567 Phenazine biosynthesis-like protein BAA_3506 PF13193 AMP-binding enzyme C-terminal domain BAA_3506 PF00501 AMP-binding enzyme BAA_3509 PF01638 HxlR-like helix-turn-helix BAA_3513 PF01022 Bacterial regulatory protein, arsR family BAA_3516 PF12791 Anti-sigma factor N-terminus BAA_3517 PF04542 Sigma-70 region 2 BAA_3521 PF00440 Bacterial regulatory proteins, tetR family BAA_3525 PF05656 Protein of unknown function (DUF805) BAA_3526 PF01061 ABC-2 type transporter BAA_3527 PF00005 ABC transporter BAA_3527 PF13732 Domain of unknown function (DUF4162) BAA_3530 PF03063 Prismane/CO dehydrogenase family BAA_3532 PF00753 Metallo-beta-lactamase superfamily BAA_3533 PF01183 Glycosyl hydrolases family 25 BAA_3533 PF01471 Putative peptidoglycan binding domain BAA_3538 PF00144 Beta-lactamase BAA_3546 PF00753 Metallo-beta-lactamase superfamily BAA_3549 PF00324 Amino acid permease BAA_3550 PF07690 Major Facilitator Superfamily BAA_3556 PF02585 GlcNAc-PI de-N-acetylase BAA_3557 PF08830 Protein of unknown function (DUF1806) BAA_3558 PF03600 Citrate transporter BAA_3565 PF01032 FecCD transport family BAA_3566 PF01032 FecCD transport family BAA_3567 PF05675 Protein of unknown function (DUF817) BAA_3568 PF02567 Phenazine biosynthesis-like protein BAA_3569 PF13170 Protein of unknown function (DUF4003) BAA_3572 PF10901 Protein of unknown function (DUF2690) BAA_3574 PF03466 LysR substrate binding domain BAA_3574 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAA_3575 PF00107 Zinc-binding dehydrogenase BAA_3575 PF08240 Alcohol dehydrogenase GroES-like domain BAA_3578 PF01713 Smr domain BAA_3578 PF00488 MutS domain V BAA_3581 PF00128 Alpha amylase, catalytic domain BAA_3581 PF09154 Domain of unknown function (DUF1939) BAA_3583 PF01432 Peptidase family M3 BAA_3583 PF08439 Oligopeptidase F BAA_3584 PF00144 Beta-lactamase BAA_3586 PF07690 Major Facilitator Superfamily BAA_3587 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAA_3587 PF03466 LysR substrate binding domain BAA_3590 PF03009 Glycerophosphoryl diester phosphodiesterase family BAA_3593 PF01494 FAD binding domain BAA_3594 PF01022 Bacterial regulatory protein, arsR family BAA_3595 PF00107 Zinc-binding dehydrogenase BAA_3595 PF08240 Alcohol dehydrogenase GroES-like domain BAA_3596 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BAA_3600 PF04299 Putative FMN-binding domain BAA_3601 PF04229 GrpB protein BAA_3603 PF01758 Sodium Bile acid symporter family BAA_3604 PF02913 FAD linked oxidases, C-terminal domain BAA_3604 PF01565 FAD binding domain BAA_3608 PF00132 Bacterial transferase hexapeptide (six repeats) BAA_3609 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BAA_3610 PF00535 Glycosyl transferase family 2 BAA_3611 PF00378 Enoyl-CoA hydratase/isomerase BAA_3612 PF08453 Peptidase family M9 N-terminal BAA_3612 PF01752 Collagenase BAA_3612 PF18496 Collagenase G catalytic helper subdomain BAA_3613 PF02308 MgtC family BAA_3616 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAA_3617 PF04294 VanW like protein BAA_3619 PF13037 Domain of unknown function (DUF3898) BAA_3619 PF13039 Protein of unknown function (DUF3900) BAA_3623 PF00313 'Cold-shock' DNA-binding domain BAA_3625 PF00258 Flavodoxin BAA_3627 PF00293 NUDIX domain BAA_3629 PF00132 Bacterial transferase hexapeptide (six repeats) BAA_3631 PF00106 short chain dehydrogenase BAA_3633 PF00206 Lyase BAA_3633 PF14698 Argininosuccinate lyase C-terminal BAA_3635 PF01156 Inosine-uridine preferring nucleoside hydrolase BAA_3636 PF00474 Sodium:solute symporter family BAA_3638 PF00171 Aldehyde dehydrogenase family BAA_3640 PF14151 YfhD-like protein BAA_3641 PF13243 Squalene-hopene cyclase C-terminal domain BAA_3641 PF13249 Squalene-hopene cyclase N-terminal domain BAA_3642 PF02681 Divergent PAP2 family BAA_3643 PF00892 EamA-like transporter family BAA_3644 PF06961 Protein of unknown function (DUF1294) BAA_3647 PF10609 NUBPL iron-transfer P-loop NTPase BAA_3649 PF02391 MoaE protein BAA_3650 PF03454 MoeA C-terminal region (domain IV) BAA_3650 PF00994 Probable molybdopterin binding domain BAA_3650 PF03453 MoeA N-terminal region (domain I and II) BAA_3651 PF00899 ThiF family BAA_3652 PF01226 Formate/nitrite transporter BAA_3653 PF06463 Molybdenum Cofactor Synthesis C BAA_3653 PF04055 Radical SAM superfamily BAA_3654 PF02634 FdhD/NarQ family BAA_3655 PF10057 Uncharacterized conserved protein (DUF2294) BAA_3656 PF07849 Protein of unknown function (DUF1641) BAA_3657 PF00037 4Fe-4S binding domain BAA_3657 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BAA_3657 PF01568 Molydopterin dinucleotide binding domain BAA_3657 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BAA_3657 PF00384 Molybdopterin oxidoreductase BAA_3659 PF03323 Bacillus/Clostridium GerA spore germination protein BAA_3668 PF08241 Methyltransferase domain BAA_3669 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAA_3670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAA_3672 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAA_3675 PF03816 Cell envelope-related transcriptional attenuator domain BAA_3677 PF08281 Sigma-70, region 4 BAA_3677 PF04542 Sigma-70 region 2 BAA_3682 PF00005 ABC transporter BAA_3682 PF13732 Domain of unknown function (DUF4162) BAA_3684 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BAA_3684 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BAA_3685 PF00521 DNA gyrase/topoisomerase IV, subunit A BAA_3685 PF03989 DNA gyrase C-terminal domain, beta-propeller BAA_3686 PF00204 DNA gyrase B BAA_3686 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAA_3686 PF00986 DNA gyrase B subunit, carboxyl terminus BAA_3686 PF01751 Toprim domain BAA_3687 PF13380 CoA binding domain BAA_3688 PF13180 PDZ domain BAA_3689 PF00486 Transcriptional regulatory protein, C terminal BAA_3689 PF00072 Response regulator receiver domain BAA_3692 PF03477 ATP cone domain BAA_3692 PF13597 Anaerobic ribonucleoside-triphosphate reductase BAA_3693 PF02660 Glycerol-3-phosphate acyltransferase BAA_3694 PF01521 Iron-sulphur cluster biosynthesis BAA_3695 PF03061 Thioesterase superfamily BAA_3696 PF00704 Glycosyl hydrolases family 18 BAA_3696 PF01476 LysM domain BAA_3698 PF08177 Small acid-soluble spore protein N family BAA_3699 PF13040 Fur-regulated basic protein B BAA_3700 PF11490 DNA polymerase III polC-type N-terminus II BAA_3700 PF02811 PHP domain BAA_3700 PF00929 Exonuclease BAA_3700 PF14579 Helix-hairpin-helix motif BAA_3700 PF07733 Bacterial DNA polymerase III alpha NTPase domain BAA_3700 PF01336 OB-fold nucleic acid binding domain BAA_3700 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BAA_3701 PF00578 AhpC/TSA family BAA_3704 PF03412 Peptidase C39 family BAA_3704 PF00005 ABC transporter BAA_3704 PF00664 ABC transporter transmembrane region BAA_3705 PF00694 Aconitase C-terminal domain BAA_3705 PF00330 Aconitase family (aconitate hydratase) BAA_3707 PF01522 Polysaccharide deacetylase BAA_3710 PF07690 Major Facilitator Superfamily BAA_3712 PF02272 DHHA1 domain BAA_3712 PF01411 tRNA synthetases class II (A) BAA_3712 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BAA_3713 PF13344 Haloacid dehalogenase-like hydrolase BAA_3713 PF00293 NUDIX domain BAA_3715 PF00108 Thiolase, N-terminal domain BAA_3715 PF02803 Thiolase, C-terminal domain BAA_3716 PF00501 AMP-binding enzyme BAA_3716 PF13193 AMP-binding enzyme C-terminal domain BAA_3717 PF02632 BioY family BAA_3718 PF00501 AMP-binding enzyme BAA_3718 PF13193 AMP-binding enzyme C-terminal domain BAA_3721 PF05532 CsbD-like BAA_3727 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BAA_3727 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BAA_3729 PF00989 PAS fold BAA_3729 PF13188 PAS domain BAA_3729 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAA_3729 PF00512 His Kinase A (phospho-acceptor) domain BAA_3729 PF13426 PAS domain BAA_3730 PF01738 Dienelactone hydrolase family BAA_3731 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAA_3732 PF00474 Sodium:solute symporter family BAA_3733 PF01645 Conserved region in glutamate synthase BAA_3734 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BAA_3735 PF02559 CarD-like/TRCF domain BAA_3736 PF00491 Arginase family BAA_3737 PF01979 Amidohydrolase family BAA_3738 PF17391 Urocanase N-terminal domain BAA_3738 PF17392 Urocanase C-terminal domain BAA_3738 PF01175 Urocanase Rossmann-like domain BAA_3739 PF00221 Aromatic amino acid lyase BAA_3740 PF09021 HutP BAA_3741 PF01209 ubiE/COQ5 methyltransferase family BAA_3745 PF11084 Protein of unknown function (DUF2621) BAA_3751 PF07301 Protein of unknown function (DUF1453) BAA_3752 PF02683 Cytochrome C biogenesis protein transmembrane region BAA_3754 PF03466 LysR substrate binding domain BAA_3754 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAA_3755 PF03788 LrgA family BAA_3756 PF04172 LrgB-like family BAA_3757 PF00293 NUDIX domain BAA_3757 PF13344 Haloacid dehalogenase-like hydrolase BAA_3762 PF01510 N-acetylmuramoyl-L-alanine amidase BAA_3762 PF01471 Putative peptidoglycan binding domain BAA_3765 PF00664 ABC transporter transmembrane region BAA_3765 PF00005 ABC transporter BAA_3766 PF00005 ABC transporter BAA_3766 PF00664 ABC transporter transmembrane region BAA_3767 PF03672 Uncharacterised protein family (UPF0154) BAA_3768 PF10747 Sporulation inhibitor of replication protein SirA BAA_3769 PF00456 Transketolase, thiamine diphosphate binding domain BAA_3769 PF02779 Transketolase, pyrimidine binding domain BAA_3769 PF02780 Transketolase, C-terminal domain BAA_3770 PF07282 Putative transposase DNA-binding domain BAA_3770 PF12323 Helix-turn-helix domain BAA_3770 PF01385 Probable transposase BAA_3771 PF00528 Binding-protein-dependent transport system inner membrane component BAA_3772 PF00528 Binding-protein-dependent transport system inner membrane component BAA_3773 PF00005 ABC transporter BAA_3777 PF05979 Bacterial protein of unknown function (DUF896) BAA_3778 PF00239 Resolvase, N terminal domain BAA_3779 PF01726 LexA DNA binding domain BAA_3779 PF00717 Peptidase S24-like BAA_3782 PF03551 Transcriptional regulator PadR-like family BAA_3792 PF01476 LysM domain BAA_3792 PF01510 N-acetylmuramoyl-L-alanine amidase BAA_3792 PF01471 Putative peptidoglycan binding domain BAA_3793 PF05105 Bacteriophage holin family BAA_3825 PF08281 Sigma-70, region 4 BAA_3835 PF02511 Thymidylate synthase complementing protein BAA_3836 PF00145 C-5 cytosine-specific DNA methylase BAA_3851 PF01381 Helix-turn-helix BAA_3856 PF03951 Glutamine synthetase, beta-Grasp domain BAA_3856 PF00120 Glutamine synthetase, catalytic domain BAA_3857 PF13411 MerR HTH family regulatory protein BAA_3858 PF06838 Methionine gamma-lyase BAA_3861 PF03458 UPF0126 domain BAA_3862 PF17866 AAA lid domain BAA_3862 PF00004 ATPase family associated with various cellular activities (AAA) BAA_3865 PF17209 Hfq protein BAA_3868 PF06725 3D domain BAA_3868 PF01476 LysM domain BAA_3869 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BAA_3869 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BAA_3870 PF00294 pfkB family carbohydrate kinase BAA_3871 PF08220 DeoR-like helix-turn-helix domain BAA_3871 PF00455 DeoR C terminal sensor domain BAA_3874 PF04238 Protein of unknown function (DUF420) BAA_3877 PF00324 Amino acid permease BAA_3878 PF00041 Fibronectin type III domain BAA_3878 PF00704 Glycosyl hydrolases family 18 BAA_3880 PF00149 Calcineurin-like phosphoesterase BAA_3880 PF10518 TAT (twin-arginine translocation) pathway signal sequence BAA_3881 PF01226 Formate/nitrite transporter BAA_3882 PF00216 Bacterial DNA-binding protein BAA_3883 PF00403 Heavy-metal-associated domain BAA_3885 PF02583 Metal-sensitive transcriptional repressor BAA_3887 PF00756 Putative esterase BAA_3888 PF00005 ABC transporter BAA_3889 PF01032 FecCD transport family BAA_3890 PF01032 FecCD transport family BAA_3893 PF03372 Endonuclease/Exonuclease/phosphatase family BAA_3894 PF12833 Helix-turn-helix domain BAA_3894 PF02805 Metal binding domain of Ada BAA_3895 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BAA_3895 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BAA_3896 PF00730 HhH-GPD superfamily base excision DNA repair protein BAA_3896 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain BAA_3897 PF07687 Peptidase dimerisation domain BAA_3897 PF01546 Peptidase family M20/M25/M40 BAA_3902 PF00561 alpha/beta hydrolase fold BAA_3903 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAA_3905 PF00563 EAL domain BAA_3905 PF00990 Diguanylate cyclase, GGDEF domain BAA_3905 PF03707 Bacterial signalling protein N terminal repeat BAA_3908 PF10787 Uncharacterised protein from bacillus cereus group BAA_3909 PF04172 LrgB-like family BAA_3910 PF03788 LrgA family BAA_3911 PF00392 Bacterial regulatory proteins, gntR family BAA_3911 PF00155 Aminotransferase class I and II BAA_3912 PF00364 Biotin-requiring enzyme BAA_3912 PF00561 alpha/beta hydrolase fold BAA_3913 PF02585 GlcNAc-PI de-N-acetylase BAA_3915 PF00388 Phosphatidylinositol-specific phospholipase C, X domain BAA_3916 PF00082 Subtilase family BAA_3918 PF07486 Cell Wall Hydrolase BAA_3919 PF03275 UDP-galactopyranose mutase BAA_3920 PF00884 Sulfatase BAA_3921 PF00350 Dynamin family BAA_3923 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family BAA_3924 PF00512 His Kinase A (phospho-acceptor) domain BAA_3924 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAA_3925 PF00486 Transcriptional regulatory protein, C terminal BAA_3925 PF00072 Response regulator receiver domain BAA_3928 PF00005 ABC transporter BAA_3929 PF01119 DNA mismatch repair protein, C-terminal domain BAA_3929 PF08676 MutL C terminal dimerisation domain BAA_3930 PF01624 MutS domain I BAA_3930 PF05192 MutS domain III BAA_3930 PF05190 MutS family domain IV BAA_3930 PF05188 MutS domain II BAA_3930 PF00488 MutS domain V BAA_3931 PF10628 Outer spore coat protein E (CotE) BAA_3932 PF06133 Control of competence regulator ComK, YlbF/YmcA BAA_3933 PF00919 Uncharacterized protein family UPF0004 BAA_3933 PF04055 Radical SAM superfamily BAA_3933 PF01938 TRAM domain BAA_3934 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BAA_3935 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase BAA_3935 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg BAA_3935 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II BAA_3936 PF01244 Membrane dipeptidase (Peptidase family M19) BAA_3937 PF04232 Stage V sporulation protein S (SpoVS) BAA_3938 PF13277 YmdB-like protein BAA_3939 PF01966 HD domain BAA_3939 PF12072 Domain of unknown function (DUF3552) BAA_3939 PF00013 KH domain BAA_3940 PF00154 recA bacterial DNA recombination protein BAA_3941 PF00154 recA bacterial DNA recombination protein BAA_3942 PF00994 Probable molybdopterin binding domain BAA_3942 PF18146 Damage-inducible protein CinA KH domain BAA_3942 PF02464 Competence-damaged protein BAA_3943 PF01066 CDP-alcohol phosphatidyltransferase BAA_3944 PF13464 Domain of unknown function (DUF4115) BAA_3945 PF11868 Protein of unknown function (DUF3388) BAA_3946 PF11588 Protein of unknown function (DUF3243) BAA_3948 PF00675 Insulinase (Peptidase family M16) BAA_3948 PF05193 Peptidase M16 inactive domain BAA_3949 PF05193 Peptidase M16 inactive domain BAA_3955 PF00392 Bacterial regulatory proteins, gntR family BAA_3955 PF07702 UTRA domain BAA_3957 PF01580 FtsK/SpoIIIE family BAA_3957 PF17854 FtsK alpha domain BAA_3957 PF09397 Ftsk gamma domain BAA_3958 PF14035 YlzJ-like protein BAA_3959 PF00574 Clp protease BAA_3960 PF17770 Ribonuclease J C-terminal domain BAA_3960 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BAA_3960 PF00753 Metallo-beta-lactamase superfamily BAA_3961 PF00701 Dihydrodipicolinate synthetase family BAA_3962 PF13840 ACT domain BAA_3962 PF00696 Amino acid kinase family BAA_3963 PF01118 Semialdehyde dehydrogenase, NAD binding domain BAA_3963 PF02774 Semialdehyde dehydrogenase, dimerisation domain BAA_3964 PF02441 Flavoprotein BAA_3965 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BAA_3965 PF16924 Dipicolinate synthase subunit A N-terminal domain BAA_3966 PF05239 PRC-barrel domain BAA_3967 PF00675 Insulinase (Peptidase family M16) BAA_3967 PF05193 Peptidase M16 inactive domain BAA_3968 PF01522 Polysaccharide deacetylase BAA_3969 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BAA_3969 PF03725 3' exoribonuclease family, domain 2 BAA_3969 PF00013 KH domain BAA_3969 PF01138 3' exoribonuclease family, domain 1 BAA_3969 PF00575 S1 RNA binding domain BAA_3970 PF01687 Riboflavin kinase BAA_3970 PF06574 FAD synthetase BAA_3971 PF16198 tRNA pseudouridylate synthase B C-terminal domain BAA_3971 PF01509 TruB family pseudouridylate synthase (N terminal domain) BAA_3972 PF02033 Ribosome-binding factor A BAA_3973 PF04456 Protein of unknown function (DUF503) BAA_3974 PF04760 Translation initiation factor IF-2, N-terminal region BAA_3974 PF11987 Translation-initiation factor 2 BAA_3974 PF00009 Elongation factor Tu GTP binding domain BAA_3975 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BAA_3976 PF04296 Protein of unknown function (DUF448) BAA_3977 PF00575 S1 RNA binding domain BAA_3977 PF08529 NusA N-terminal domain BAA_3977 PF13184 NusA-like KH domain BAA_3978 PF02576 RimP N-terminal domain BAA_3978 PF17384 RimP C-terminal SH3 domain BAA_3979 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BAA_3979 PF14480 DNA polymerase III polC-type N-terminus I BAA_3979 PF14579 Helix-hairpin-helix motif BAA_3979 PF02811 PHP domain BAA_3979 PF11490 DNA polymerase III polC-type N-terminus II BAA_3979 PF07733 Bacterial DNA polymerase III alpha NTPase domain BAA_3979 PF00929 Exonuclease BAA_3980 PF04073 Aminoacyl-tRNA editing domain BAA_3980 PF03129 Anticodon binding domain BAA_3980 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BAA_3981 PF02163 Peptidase family M50 BAA_3981 PF17820 PDZ domain BAA_3982 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BAA_3982 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BAA_3982 PF13288 DXP reductoisomerase C-terminal domain BAA_3984 PF01255 Putative undecaprenyl diphosphate synthase BAA_3985 PF01765 Ribosome recycling factor BAA_3986 PF00696 Amino acid kinase family BAA_3987 PF00889 Elongation factor TS BAA_3988 PF00318 Ribosomal protein S2 BAA_3989 PF08222 CodY helix-turn-helix domain BAA_3989 PF06018 CodY GAF-like domain BAA_3990 PF07724 AAA domain (Cdc48 subfamily) BAA_3990 PF00004 ATPase family associated with various cellular activities (AAA) BAA_3990 PF10431 C-terminal, D2-small domain, of ClpB protein BAA_3991 PF00227 Proteasome subunit BAA_3992 PF00589 Phage integrase family BAA_3992 PF02899 Phage integrase, N-terminal SAM-like domain BAA_3993 PF01134 Glucose inhibited division protein A BAA_3994 PF01751 Toprim domain BAA_3994 PF01131 DNA topoisomerase BAA_3994 PF01396 Topoisomerase DNA binding C4 zinc finger BAA_3996 PF02629 CoA binding domain BAA_3996 PF00549 CoA-ligase BAA_3997 PF00549 CoA-ligase BAA_3997 PF08442 ATP-grasp domain BAA_3998 PF01351 Ribonuclease HII BAA_3999 PF01926 50S ribosome-binding GTPase BAA_4000 PF10502 Signal peptidase, peptidase S26 BAA_4001 PF01245 Ribosomal protein L19 BAA_4003 PF01746 tRNA (Guanine-1)-methyltransferase BAA_4004 PF01782 RimM N-terminal domain BAA_4004 PF05239 PRC-barrel domain BAA_4006 PF00886 Ribosomal protein S16 BAA_4007 PF02978 Signal peptide binding domain BAA_4007 PF00448 SRP54-type protein, GTPase domain BAA_4007 PF02881 SRP54-type protein, helical bundle domain BAA_4008 PF04297 Putative helix-turn-helix protein, YlxM / p13 like BAA_4009 PF00448 SRP54-type protein, GTPase domain BAA_4009 PF02881 SRP54-type protein, helical bundle domain BAA_4010 PF02463 RecF/RecN/SMC N terminal domain BAA_4010 PF06470 SMC proteins Flexible Hinge Domain BAA_4011 PF00035 Double-stranded RNA binding motif BAA_4011 PF14622 Ribonuclease-III-like BAA_4012 PF00550 Phosphopantetheine attachment site BAA_4014 PF00698 Acyl transferase domain BAA_4015 PF02504 Fatty acid synthesis protein BAA_4016 PF03061 Thioesterase superfamily BAA_4017 PF00270 DEAD/DEAH box helicase BAA_4017 PF17191 RecG wedge domain BAA_4017 PF00271 Helicase conserved C-terminal domain BAA_4018 PF02734 DAK2 domain BAA_4018 PF13684 Dihydroxyacetone kinase family BAA_4019 PF03780 Asp23 family, cell envelope-related function BAA_4020 PF00830 Ribosomal L28 family BAA_4021 PF04263 Thiamin pyrophosphokinase, catalytic domain BAA_4021 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain BAA_4022 PF00834 Ribulose-phosphate 3 epimerase family BAA_4023 PF03193 RsgA GTPase BAA_4023 PF16745 RsgA N-terminal domain BAA_4024 PF00069 Protein kinase domain BAA_4024 PF03793 PASTA domain BAA_4026 PF04055 Radical SAM superfamily BAA_4027 PF01029 NusB family BAA_4027 PF01189 16S rRNA methyltransferase RsmB/F BAA_4028 PF02911 Formyl transferase, C-terminal domain BAA_4028 PF00551 Formyl transferase BAA_4029 PF01327 Polypeptide deformylase BAA_4030 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BAA_4030 PF18074 Primosomal protein N C-terminal domain BAA_4030 PF00271 Helicase conserved C-terminal domain BAA_4030 PF04851 Type III restriction enzyme, res subunit BAA_4030 PF17764 3′ DNA-binding domain (3′BD) BAA_4031 PF02441 Flavoprotein BAA_4031 PF04127 DNA / pantothenate metabolism flavoprotein BAA_4032 PF01192 RNA polymerase Rpb6 BAA_4033 PF00625 Guanylate kinase BAA_4034 PF04025 Domain of unknown function (DUF370) BAA_4035 PF03755 YicC-like family, N-terminal region BAA_4035 PF08340 Domain of unknown function (DUF1732) BAA_4036 PF00690 Cation transporter/ATPase, N-terminus BAA_4036 PF00689 Cation transporting ATPase, C-terminus BAA_4038 PF01321 Creatinase/Prolidase N-terminal domain BAA_4038 PF00557 Metallopeptidase family M24 BAA_4044 PF00156 Phosphoribosyl transferase domain BAA_4045 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BAA_4046 PF01180 Dihydroorotate dehydrogenase BAA_4047 PF00175 Oxidoreductase NAD-binding domain BAA_4047 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B BAA_4048 PF02142 MGS-like domain BAA_4048 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BAA_4048 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BAA_4049 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BAA_4049 PF00117 Glutamine amidotransferase class-I BAA_4050 PF01979 Amidohydrolase family BAA_4051 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BAA_4051 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BAA_4053 PF00860 Permease family BAA_4055 PF00156 Phosphoribosyl transferase domain BAA_4057 PF01479 S4 domain BAA_4057 PF00849 RNA pseudouridylate synthase BAA_4058 PF01252 Signal peptidase (SPase) II BAA_4060 PF08264 Anticodon-binding domain of tRNA BAA_4060 PF00133 tRNA synthetases class I (I, L, M and V) BAA_4060 PF06827 Zinc finger found in FPG and IleRS BAA_4061 PF05103 DivIVA protein BAA_4062 PF01479 S4 domain BAA_4062 PF17774 Putative RNA-binding domain in YlmH BAA_4063 PF02325 YGGT family BAA_4064 PF04472 Cell division protein SepF BAA_4065 PF01168 Alanine racemase, N-terminal domain BAA_4067 PF05239 PRC-barrel domain BAA_4068 PF04542 Sigma-70 region 2 BAA_4068 PF04545 Sigma-70, region 4 BAA_4068 PF04539 Sigma-70 region 3 BAA_4069 PF04542 Sigma-70 region 2 BAA_4069 PF04545 Sigma-70, region 4 BAA_4070 PF03419 Sporulation factor SpoIIGA BAA_4071 PF00091 Tubulin/FtsZ family, GTPase domain BAA_4071 PF12327 FtsZ family, C-terminal domain BAA_4072 PF02491 SHS2 domain inserted in FTSA BAA_4073 PF08478 POTRA domain, FtsQ-type BAA_4073 PF03799 Cell division protein FtsQ BAA_4074 PF01565 FAD binding domain BAA_4074 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BAA_4075 PF04101 Glycosyltransferase family 28 C-terminal domain BAA_4075 PF03033 Glycosyltransferase family 28 N-terminal domain BAA_4076 PF01098 Cell cycle protein BAA_4077 PF02875 Mur ligase family, glutamate ligase domain BAA_4077 PF08245 Mur ligase middle domain BAA_4078 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BAA_4078 PF00953 Glycosyl transferase family 4 BAA_4079 PF01225 Mur ligase family, catalytic domain BAA_4079 PF02875 Mur ligase family, glutamate ligase domain BAA_4079 PF08245 Mur ligase middle domain BAA_4080 PF00905 Penicillin binding protein transpeptidase domain BAA_4080 PF03793 PASTA domain BAA_4080 PF03717 Penicillin-binding Protein dimerisation domain BAA_4082 PF04977 Septum formation initiator BAA_4083 PF01795 MraW methylase family BAA_4084 PF10079 Bacillithiol biosynthesis BshC BAA_4085 PF08546 Ketopantoate reductase PanE/ApbA C terminal BAA_4085 PF02558 Ketopantoate reductase PanE/ApbA BAA_4086 PF00583 Acetyltransferase (GNAT) family BAA_4088 PF01783 Ribosomal L32p protein family BAA_4089 PF02620 Large ribosomal RNA subunit accumulation protein YceD BAA_4098 PF12123 N-acetylmuramoyl-l-alanine amidase BAA_4098 PF01510 N-acetylmuramoyl-L-alanine amidase BAA_4099 PF05105 Bacteriophage holin family BAA_4117 PF00574 Clp protease BAA_4119 PF03354 Phage Terminase BAA_4123 PF10137 Predicted nucleotide-binding protein containing TIR-like domain BAA_4124 PF00589 Phage integrase family BAA_4133 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAA_4139 PF04545 Sigma-70, region 4 BAA_4139 PF04539 Sigma-70 region 3 BAA_4139 PF04542 Sigma-70 region 2 BAA_4144 PF07319 Primosomal protein DnaI N-terminus BAA_4144 PF01695 IstB-like ATP binding protein BAA_4150 PF01381 Helix-turn-helix BAA_4157 PF00589 Phage integrase family BAA_4157 PF14659 Phage integrase, N-terminal SAM-like domain BAA_4158 PF05636 HIGH Nucleotidyl Transferase BAA_4159 PF05362 Lon protease (S16) C-terminal proteolytic domain BAA_4159 PF13180 PDZ domain BAA_4160 PF01734 Patatin-like phospholipase BAA_4161 PF01467 Cytidylyltransferase-like BAA_4162 PF07670 Nucleoside recognition BAA_4167 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) BAA_4168 PF06133 Control of competence regulator ComK, YlbF/YmcA BAA_4169 PF00300 Histidine phosphatase superfamily (branch 1) BAA_4170 PF14003 YlbE-like protein BAA_4171 PF14071 Putative coat protein BAA_4172 PF14504 CAP-associated N-terminal BAA_4172 PF00188 Cysteine-rich secretory protein family BAA_4173 PF08868 YugN-like family BAA_4174 PF00795 Carbon-nitrogen hydrolase BAA_4175 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) BAA_4176 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BAA_4177 PF00510 Cytochrome c oxidase subunit III BAA_4178 PF00115 Cytochrome C and Quinol oxidase polypeptide I BAA_4179 PF00034 Cytochrome c BAA_4179 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BAA_4179 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BAA_4180 PF01040 UbiA prenyltransferase family BAA_4181 PF02628 Cytochrome oxidase assembly protein BAA_4182 PF00364 Biotin-requiring enzyme BAA_4182 PF02785 Biotin carboxylase C-terminal domain BAA_4182 PF02436 Conserved carboxylase domain BAA_4182 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BAA_4182 PF00682 HMGL-like BAA_4182 PF00289 Biotin carboxylase, N-terminal domain BAA_4183 PF01098 Cell cycle protein BAA_4184 PF07408 Protein of unknown function (DUF1507) BAA_4186 PF02562 PhoH-like protein BAA_4186 PF13638 PIN domain BAA_4188 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) BAA_4190 PF14036 YlaH-like protein BAA_4193 PF00459 Inositol monophosphatase family BAA_4195 PF06335 Protein of unknown function (DUF1054) BAA_4196 PF05256 Uncharacterised protein family (UPF0223) BAA_4197 PF01276 Orn/Lys/Arg decarboxylase, major domain BAA_4197 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BAA_4204 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAA_4204 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BAA_4205 PF00364 Biotin-requiring enzyme BAA_4205 PF02817 e3 binding domain BAA_4205 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BAA_4206 PF02779 Transketolase, pyrimidine binding domain BAA_4206 PF02780 Transketolase, C-terminal domain BAA_4207 PF00676 Dehydrogenase E1 component BAA_4209 PF01327 Polypeptide deformylase BAA_4212 PF00753 Metallo-beta-lactamase superfamily BAA_4212 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BAA_4212 PF17770 Ribonuclease J C-terminal domain BAA_4213 PF02254 TrkA-N domain BAA_4213 PF02080 TrkA-C domain BAA_4215 PF01546 Peptidase family M20/M25/M40 BAA_4215 PF07687 Peptidase dimerisation domain BAA_4216 PF00132 Bacterial transferase hexapeptide (six repeats) BAA_4216 PF14602 Hexapeptide repeat of succinyl-transferase BAA_4216 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal BAA_4217 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAA_4217 PF03466 LysR substrate binding domain BAA_4220 PF04308 Ribonuclease H-like BAA_4222 PF08796 Protein of unknown function (DUF1797) BAA_4226 PF00563 EAL domain BAA_4226 PF10388 EAL-domain associated signalling protein domain BAA_4228 PF10518 TAT (twin-arginine translocation) pathway signal sequence BAA_4228 PF00149 Calcineurin-like phosphoesterase BAA_4230 PF13089 Polyphosphate kinase N-terminal domain BAA_4230 PF17941 Polyphosphate kinase C-terminal domain 1 BAA_4230 PF13090 Polyphosphate kinase C-terminal domain 2 BAA_4230 PF02503 Polyphosphate kinase middle domain BAA_4231 PF02541 Ppx/GppA phosphatase family BAA_4232 PF14177 YkyB-like protein BAA_4238 PF07690 Major Facilitator Superfamily BAA_4241 PF08267 Cobalamin-independent synthase, N-terminal domain BAA_4241 PF01717 Cobalamin-independent synthase, Catalytic domain BAA_4243 PF14040 Deoxyribonuclease NucA/NucB BAA_4245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAA_4245 PF00512 His Kinase A (phospho-acceptor) domain BAA_4247 PF00155 Aminotransferase class I and II BAA_4248 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BAA_4248 PF00356 Bacterial regulatory proteins, lacI family BAA_4250 PF00528 Binding-protein-dependent transport system inner membrane component BAA_4251 PF00528 Binding-protein-dependent transport system inner membrane component BAA_4252 PF13416 Bacterial extracellular solute-binding protein BAA_4253 PF00128 Alpha amylase, catalytic domain BAA_4253 PF02903 Alpha amylase, N-terminal ig-like domain BAA_4253 PF16657 Maltogenic Amylase, C-terminal domain BAA_4254 PF00128 Alpha amylase, catalytic domain BAA_4254 PF16657 Maltogenic Amylase, C-terminal domain BAA_4255 PF03459 TOBE domain BAA_4255 PF17912 MalK OB fold domain BAA_4255 PF00005 ABC transporter BAA_4262 PF02803 Thiolase, C-terminal domain BAA_4262 PF00108 Thiolase, N-terminal domain BAA_4263 PF00293 NUDIX domain BAA_4269 PF03551 Transcriptional regulator PadR-like family BAA_4273 PF01636 Phosphotransferase enzyme family BAA_4275 PF00795 Carbon-nitrogen hydrolase BAA_4276 PF00155 Aminotransferase class I and II BAA_4278 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain BAA_4278 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain BAA_4280 PF00596 Class II Aldolase and Adducin N-terminal domain BAA_4281 PF03079 ARD/ARD' family BAA_4286 PF00990 Diguanylate cyclase, GGDEF domain BAA_4287 PF00881 Nitroreductase family BAA_4290 PF05524 PEP-utilising enzyme, N-terminal BAA_4290 PF00391 PEP-utilising enzyme, mobile domain BAA_4290 PF02896 PEP-utilising enzyme, TIM barrel domain BAA_4291 PF00381 PTS HPr component phosphorylation site BAA_4292 PF02378 Phosphotransferase system, EIIC BAA_4292 PF00367 phosphotransferase system, EIIB BAA_4292 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BAA_4293 PF00874 PRD domain BAA_4293 PF03123 CAT RNA binding domain BAA_4296 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BAA_4297 PF01979 Amidohydrolase family BAA_4299 PF04079 Segregation and condensation complex subunit ScpB BAA_4300 PF02616 Segregation and condensation protein ScpA BAA_4301 PF03745 Domain of unknown function (DUF309) BAA_4302 PF00583 Acetyltransferase (GNAT) family BAA_4304 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BAA_4305 PF06207 Protein of unknown function (DUF1002) BAA_4307 PF03323 Bacillus/Clostridium GerA spore germination protein BAA_4308 PF14097 Stage V sporulation protein AE1 BAA_4309 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BAA_4310 PF07451 Stage V sporulation protein AD (SpoVAD) BAA_4311 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BAA_4312 PF13782 Stage V sporulation protein AB BAA_4313 PF12164 Stage V sporulation protein AA BAA_4315 PF00209 Sodium:neurotransmitter symporter family BAA_4316 PF04545 Sigma-70, region 4 BAA_4316 PF04539 Sigma-70 region 3 BAA_4316 PF04542 Sigma-70 region 2 BAA_4317 PF13581 Histidine kinase-like ATPase domain BAA_4318 PF01740 STAS domain BAA_4319 PF07943 Penicillin-binding protein 5, C-terminal domain BAA_4319 PF00768 D-alanyl-D-alanine carboxypeptidase BAA_4320 PF00392 Bacterial regulatory proteins, gntR family BAA_4321 PF00005 ABC transporter BAA_4324 PF01047 MarR family BAA_4326 PF00860 Permease family BAA_4327 PF01544 CorA-like Mg2+ transporter protein BAA_4328 PF02885 Glycosyl transferase family, helical bundle domain BAA_4328 PF00591 Glycosyl transferase family, a/b domain BAA_4328 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BAA_4329 PF01048 Phosphorylase superfamily BAA_4330 PF01676 Metalloenzyme superfamily BAA_4332 PF00589 Phage integrase family BAA_4332 PF02899 Phage integrase, N-terminal SAM-like domain BAA_4333 PF14004 Protein of unknown function (DUF4227) BAA_4334 PF01475 Ferric uptake regulator family BAA_4335 PF01944 Stage II sporulation protein M BAA_4337 PF00293 NUDIX domain BAA_4338 PF13072 Mother cell inhibitor of FtsZ BAA_4339 PF00248 Aldo/keto reductase family BAA_4340 PF00248 Aldo/keto reductase family BAA_4341 PF04229 GrpB protein BAA_4341 PF13673 Acetyltransferase (GNAT) domain BAA_4343 PF00149 Calcineurin-like phosphoesterase BAA_4343 PF00746 LPXTG cell wall anchor motif BAA_4343 PF02872 5'-nucleotidase, C-terminal domain BAA_4343 PF00565 Staphylococcal nuclease homologue BAA_4345 PF12146 Serine aminopeptidase, S33 BAA_4346 PF03553 Na+/H+ antiporter family BAA_4346 PF13726 Na+-H+ antiporter family BAA_4347 PF00356 Bacterial regulatory proteins, lacI family BAA_4348 PF00583 Acetyltransferase (GNAT) family BAA_4349 PF12146 Serine aminopeptidase, S33 BAA_4350 PF10827 Protein of unknown function (DUF2552) BAA_4353 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BAA_4353 PF01872 RibD C-terminal domain BAA_4354 PF00677 Lumazine binding domain BAA_4355 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BAA_4355 PF00925 GTP cyclohydrolase II BAA_4357 PF00885 6,7-dimethyl-8-ribityllumazine synthase BAA_4358 PF06968 Biotin and Thiamin Synthesis associated domain BAA_4358 PF04055 Radical SAM superfamily BAA_4359 PF13847 Methyltransferase domain BAA_4360 PF12697 Alpha/beta hydrolase family BAA_4360 PF08241 Methyltransferase domain BAA_4361 PF00155 Aminotransferase class I and II BAA_4363 PF00202 Aminotransferase class-III BAA_4367 PF02872 5'-nucleotidase, C-terminal domain BAA_4367 PF00149 Calcineurin-like phosphoesterase BAA_4369 PF13404 AsnC-type helix-turn-helix domain BAA_4369 PF01037 Lrp/AsnC ligand binding domain BAA_4372 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BAA_4372 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BAA_4373 PF00202 Aminotransferase class-III BAA_4374 PF00696 Amino acid kinase family BAA_4375 PF01960 ArgJ family BAA_4376 PF01118 Semialdehyde dehydrogenase, NAD binding domain BAA_4376 PF02774 Semialdehyde dehydrogenase, dimerisation domain BAA_4378 PF00106 short chain dehydrogenase BAA_4381 PF14748 Pyrroline-5-carboxylate reductase dimerisation BAA_4381 PF03807 NADP oxidoreductase coenzyme F420-dependent BAA_4382 PF03313 Serine dehydratase alpha chain BAA_4383 PF01842 ACT domain BAA_4383 PF03315 Serine dehydratase beta chain BAA_4385 PF00753 Metallo-beta-lactamase superfamily BAA_4385 PF12706 Beta-lactamase superfamily domain BAA_4387 PF00817 impB/mucB/samB family BAA_4387 PF11798 IMS family HHH motif BAA_4387 PF11799 impB/mucB/samB family C-terminal domain BAA_4388 PF07687 Peptidase dimerisation domain BAA_4388 PF01546 Peptidase family M20/M25/M40 BAA_4389 PF13302 Acetyltransferase (GNAT) domain BAA_4391 PF03734 L,D-transpeptidase catalytic domain BAA_4392 PF11728 Putative aromatic acid exporter C-terminal domain BAA_4392 PF06081 Aromatic acid exporter family member 1 BAA_4393 PF00005 ABC transporter BAA_4394 PF00528 Binding-protein-dependent transport system inner membrane component BAA_4395 PF00497 Bacterial extracellular solute-binding proteins, family 3 BAA_4397 PF06491 Disulphide isomerase BAA_4398 PF11208 Protein of unknown function (DUF2992) BAA_4400 PF01098 Cell cycle protein BAA_4401 PF02817 e3 binding domain BAA_4401 PF00364 Biotin-requiring enzyme BAA_4401 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BAA_4402 PF02780 Transketolase, C-terminal domain BAA_4402 PF02779 Transketolase, pyrimidine binding domain BAA_4403 PF00676 Dehydrogenase E1 component BAA_4404 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BAA_4404 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAA_4405 PF00871 Acetokinase family BAA_4406 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BAA_4406 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BAA_4407 PF01515 Phosphate acetyl/butaryl transferase BAA_4408 PF00989 PAS fold BAA_4408 PF00158 Sigma-54 interaction domain BAA_4408 PF02954 Bacterial regulatory protein, Fis family BAA_4410 PF03009 Glycerophosphoryl diester phosphodiesterase family BAA_4411 PF14174 YycC-like protein BAA_4413 PF00072 Response regulator receiver domain BAA_4413 PF08769 Sporulation initiation factor Spo0A C terminal BAA_4414 PF05580 SpoIVB peptidase S55 BAA_4414 PF17820 PDZ domain BAA_4415 PF13476 AAA domain BAA_4416 PF02863 Arginine repressor, C-terminal domain BAA_4416 PF01316 Arginine repressor, DNA binding domain BAA_4417 PF01728 FtsJ-like methyltransferase BAA_4417 PF01479 S4 domain BAA_4418 PF02779 Transketolase, pyrimidine binding domain BAA_4418 PF02780 Transketolase, C-terminal domain BAA_4418 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BAA_4419 PF00348 Polyprenyl synthetase BAA_4420 PF02609 Exonuclease VII small subunit BAA_4421 PF13742 OB-fold nucleic acid binding domain BAA_4421 PF02601 Exonuclease VII, large subunit BAA_4422 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BAA_4422 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BAA_4423 PF01029 NusB family BAA_4424 PF03780 Asp23 family, cell envelope-related function BAA_4425 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BAA_4425 PF02785 Biotin carboxylase C-terminal domain BAA_4425 PF00289 Biotin carboxylase, N-terminal domain BAA_4426 PF00364 Biotin-requiring enzyme BAA_4427 PF12685 SpoIIIAH-like protein BAA_4429 PF09581 Stage III sporulation protein AF (Spore_III_AF) BAA_4430 PF09546 Stage III sporulation protein AE (spore_III_AE) BAA_4431 PF06686 Stage III sporulation protein AC/AD protein family BAA_4432 PF06686 Stage III sporulation protein AC/AD protein family BAA_4433 PF09548 Stage III sporulation protein AB (spore_III_AB) BAA_4437 PF01132 Elongation factor P (EF-P) OB domain BAA_4437 PF08207 Elongation factor P (EF-P) KOW-like domain BAA_4437 PF09285 Elongation factor P, C-terminal BAA_4438 PF00557 Metallopeptidase family M24 BAA_4438 PF01321 Creatinase/Prolidase N-terminal domain BAA_4439 PF01220 Dehydroquinase class II BAA_4440 PF11085 Conserved membrane protein YqhR BAA_4441 PF07136 Protein of unknown function (DUF1385) BAA_4442 PF13419 Haloacid dehalogenase-like hydrolase BAA_4444 PF01325 Iron dependent repressor, N-terminal DNA binding domain BAA_4444 PF02742 Iron dependent repressor, metal binding and dimerisation domain BAA_4448 PF03099 Biotin/lipoate A/B protein ligase family BAA_4449 PF00581 Rhodanese-like domain BAA_4450 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BAA_4450 PF00356 Bacterial regulatory proteins, lacI family BAA_4452 PF00893 Small Multidrug Resistance protein BAA_4453 PF00893 Small Multidrug Resistance protein BAA_4461 PF00005 ABC transporter BAA_4462 PF00392 Bacterial regulatory proteins, gntR family BAA_4465 PF02347 Glycine cleavage system P-protein BAA_4466 PF02347 Glycine cleavage system P-protein BAA_4467 PF01571 Aminomethyltransferase folate-binding domain BAA_4467 PF08669 Glycine cleavage T-protein C-terminal barrel domain BAA_4468 PF00271 Helicase conserved C-terminal domain BAA_4468 PF00176 SNF2 family N-terminal domain BAA_4469 PF11079 Bacterial protein YqhG of unknown function BAA_4474 PF14038 YqzE-like protein BAA_4475 PF01202 Shikimate kinase BAA_4481 PF07963 Prokaryotic N-terminal methylation motif BAA_4483 PF00482 Type II secretion system (T2SS), protein F BAA_4484 PF00437 Type II/IV secretion system protein BAA_4486 PF11117 Protein of unknown function (DUF2626) BAA_4487 PF00375 Sodium:dicarboxylate symporter family BAA_4494 PF03033 Glycosyltransferase family 28 N-terminal domain BAA_4494 PF04101 Glycosyltransferase family 28 C-terminal domain BAA_4495 PF02310 B12 binding domain BAA_4495 PF00809 Pterin binding enzyme BAA_4495 PF02965 Vitamin B12 dependent methionine synthase, activation domain BAA_4495 PF02607 B12 binding domain BAA_4495 PF02574 Homocysteine S-methyltransferase BAA_4496 PF02574 Homocysteine S-methyltransferase BAA_4496 PF02219 Methylenetetrahydrofolate reductase BAA_4499 PF01053 Cys/Met metabolism PLP-dependent enzyme BAA_4500 PF01053 Cys/Met metabolism PLP-dependent enzyme BAA_4502 PF01022 Bacterial regulatory protein, arsR family BAA_4504 PF00753 Metallo-beta-lactamase superfamily BAA_4505 PF10958 Protein of unknown function (DUF2759) BAA_4506 PF00480 ROK family BAA_4507 PF06014 Bacterial protein of unknown function (DUF910) BAA_4508 PF01812 5-formyltetrahydrofolate cyclo-ligase family BAA_4509 PF00471 Ribosomal protein L33 BAA_4510 PF00483 Nucleotidyl transferase BAA_4511 PF01895 PhoU domain BAA_4512 PF00005 ABC transporter BAA_4513 PF00528 Binding-protein-dependent transport system inner membrane component BAA_4514 PF00528 Binding-protein-dependent transport system inner membrane component BAA_4515 PF12849 PBP superfamily domain BAA_4517 PF07690 Major Facilitator Superfamily BAA_4518 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BAA_4518 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BAA_4522 PF04551 GcpE protein BAA_4523 PF01475 Ferric uptake regulator family BAA_4524 PF00950 ABC 3 transport family BAA_4525 PF00005 ABC transporter BAA_4526 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BAA_4526 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BAA_4527 PF11116 Protein of unknown function (DUF2624) BAA_4528 PF01261 Xylose isomerase-like TIM barrel BAA_4529 PF00270 DEAD/DEAH box helicase BAA_4529 PF00271 Helicase conserved C-terminal domain BAA_4532 PF02401 LytB protein BAA_4533 PF01784 NIF3 (NGG1p interacting factor 3) BAA_4534 PF04816 tRNA (adenine(22)-N(1))-methyltransferase BAA_4535 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BAA_4536 PF04545 Sigma-70, region 4 BAA_4536 PF03979 Sigma-70 factor, region 1.1 BAA_4536 PF04542 Sigma-70 region 2 BAA_4536 PF04539 Sigma-70 region 3 BAA_4536 PF00140 Sigma-70 factor, region 1.2 BAA_4537 PF08275 DNA primase catalytic core, N-terminal domain BAA_4537 PF10410 DnaB-helicase binding domain of primase BAA_4537 PF01807 CHC2 zinc finger BAA_4540 PF03618 Kinase/pyrophosphorylase BAA_4541 PF00571 CBS domain BAA_4541 PF08279 HTH domain BAA_4542 PF11967 Recombination protein O N terminal BAA_4542 PF02565 Recombination protein O C terminal BAA_4544 PF07650 KH domain BAA_4544 PF01926 50S ribosome-binding GTPase BAA_4545 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BAA_4546 PF01219 Prokaryotic diacylglycerol kinase BAA_4547 PF02130 Uncharacterized protein family UPF0054 BAA_4548 PF07697 7TM-HD extracellular BAA_4548 PF01966 HD domain BAA_4548 PF07698 7TM receptor with intracellular HD hydrolase BAA_4549 PF02562 PhoH-like protein BAA_4550 PF06898 Putative stage IV sporulation protein YqfD BAA_4551 PF07873 YabP family BAA_4552 PF09424 Yqey-like protein BAA_4553 PF01165 Ribosomal protein S21 BAA_4554 PF01938 TRAM domain BAA_4554 PF00919 Uncharacterized protein family UPF0004 BAA_4554 PF04055 Radical SAM superfamily BAA_4555 PF04452 RNA methyltransferase BAA_4557 PF00226 DnaJ domain BAA_4557 PF00684 DnaJ central domain BAA_4557 PF01556 DnaJ C terminal domain BAA_4558 PF00012 Hsp70 protein BAA_4559 PF01025 GrpE BAA_4560 PF01628 HrcA protein C terminal domain BAA_4561 PF04055 Radical SAM superfamily BAA_4561 PF06969 HemN C-terminal domain BAA_4562 PF01638 HxlR-like helix-turn-helix BAA_4563 PF03144 Elongation factor Tu domain 2 BAA_4563 PF00009 Elongation factor Tu GTP binding domain BAA_4563 PF00679 Elongation factor G C-terminus BAA_4563 PF06421 GTP-binding protein LepA C-terminus BAA_4565 PF03418 Germination protease BAA_4566 PF01649 Ribosomal protein S20 BAA_4567 PF06144 DNA polymerase III, delta subunit BAA_4568 PF14141 YqzM-like protein BAA_4569 PF13567 Domain of unknown function (DUF4131) BAA_4569 PF03772 Competence protein BAA_4569 PF00753 Metallo-beta-lactamase superfamily BAA_4571 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BAA_4572 PF10531 SLBB domain BAA_4573 PF14748 Pyrroline-5-carboxylate reductase dimerisation BAA_4573 PF03807 NADP oxidoreductase coenzyme F420-dependent BAA_4574 PF13649 Methyltransferase domain BAA_4576 PF01966 HD domain BAA_4577 PF01467 Cytidylyltransferase-like BAA_4578 PF01985 CRS1 / YhbY (CRM) domain BAA_4579 PF08501 Shikimate dehydrogenase substrate binding domain BAA_4579 PF01488 Shikimate / quinate 5-dehydrogenase BAA_4579 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BAA_4580 PF01926 50S ribosome-binding GTPase BAA_4583 PF02666 Phosphatidylserine decarboxylase BAA_4584 PF04545 Sigma-70, region 4 BAA_4584 PF04542 Sigma-70 region 2 BAA_4587 PF16244 Domain of unknown function (DUF4901) BAA_4588 PF00471 Ribosomal protein L33 BAA_4589 PF00881 Nitroreductase family BAA_4591 PF04607 Region found in RelA / SpoT proteins BAA_4593 PF00245 Alkaline phosphatase BAA_4596 PF00561 alpha/beta hydrolase fold BAA_4596 PF08386 TAP-like protein BAA_4603 PF02225 PA domain BAA_4603 PF05922 Peptidase inhibitor I9 BAA_4603 PF13860 FlgD Ig-like domain BAA_4603 PF00082 Subtilase family BAA_4605 PF00351 Biopterin-dependent aromatic amino acid hydroxylase BAA_4609 PF07681 DoxX BAA_4615 PF00005 ABC transporter BAA_4616 PF01032 FecCD transport family BAA_4617 PF01497 Periplasmic binding protein BAA_4618 PF14143 YrhC-like protein BAA_4619 PF00465 Iron-containing alcohol dehydrogenase BAA_4619 PF00171 Aldehyde dehydrogenase family BAA_4620 PF01053 Cys/Met metabolism PLP-dependent enzyme BAA_4621 PF00291 Pyridoxal-phosphate dependent enzyme BAA_4622 PF01048 Phosphorylase superfamily BAA_4623 PF08241 Methyltransferase domain BAA_4626 PF03717 Penicillin-binding Protein dimerisation domain BAA_4626 PF00905 Penicillin binding protein transpeptidase domain BAA_4627 PF01272 Transcription elongation factor, GreA/GreB, C-term BAA_4627 PF03449 Transcription elongation factor, N-terminal BAA_4628 PF00485 Phosphoribulokinase / Uridine kinase family BAA_4632 PF02618 YceG-like family BAA_4633 PF06949 Protein of unknown function (DUF1292) BAA_4634 PF03652 Holliday junction resolvase BAA_4635 PF06135 IreB regulatory phosphoprotein BAA_4636 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BAA_4636 PF02272 DHHA1 domain BAA_4636 PF01411 tRNA synthetases class II (A) BAA_4638 PF01594 AI-2E family transporter BAA_4642 PF13538 UvrD-like helicase C-terminal domain BAA_4642 PF14490 Helix-hairpin-helix containing domain BAA_4642 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain BAA_4645 PF00266 Aminotransferase class-V BAA_4646 PF02082 Transcriptional regulator BAA_4647 PF12002 MgsA AAA+ ATPase C terminal BAA_4647 PF05496 Holliday junction DNA helicase RuvB P-loop domain BAA_4647 PF16193 AAA C-terminal domain BAA_4649 PF00899 ThiF family BAA_4650 PF00152 tRNA synthetases class II (D, K and N) BAA_4650 PF01336 OB-fold nucleic acid binding domain BAA_4650 PF02938 GAD domain BAA_4651 PF13393 Histidyl-tRNA synthetase BAA_4651 PF03129 Anticodon binding domain BAA_4653 PF02580 D-Tyr-tRNA(Tyr) deacylase BAA_4654 PF13291 ACT domain BAA_4654 PF04607 Region found in RelA / SpoT proteins BAA_4654 PF02824 TGS domain BAA_4655 PF00156 Phosphoribosyl transferase domain BAA_4656 PF17768 RecJ OB domain BAA_4656 PF02272 DHHA1 domain BAA_4656 PF01368 DHH family BAA_4656 PF10141 Single-strand DNA-specific exonuclease, C terminal domain BAA_4657 PF01545 Cation efflux family BAA_4657 PF16916 Dimerisation domain of Zinc Transporter BAA_4658 PF02355 Protein export membrane protein BAA_4658 PF07549 SecD/SecF GG Motif BAA_4659 PF13797 Post-transcriptional regulator BAA_4660 PF14667 Polysaccharide biosynthesis C-terminal domain BAA_4660 PF01943 Polysaccharide biosynthesis protein BAA_4661 PF04239 Protein of unknown function (DUF421) BAA_4663 PF02699 Preprotein translocase subunit BAA_4664 PF01702 Queuine tRNA-ribosyltransferase BAA_4665 PF02547 Queuosine biosynthesis protein BAA_4666 PF11146 Protein of unknown function (DUF2905) BAA_4667 PF17864 RuvB AAA lid domain BAA_4667 PF05491 RuvB C-terminal winged helix domain BAA_4667 PF05496 Holliday junction DNA helicase RuvB P-loop domain BAA_4668 PF01330 RuvA N terminal domain BAA_4668 PF07499 RuvA, C-terminal domain BAA_4669 PF01497 Periplasmic binding protein BAA_4673 PF01022 Bacterial regulatory protein, arsR family BAA_4676 PF01476 LysM domain BAA_4677 PF02445 Quinolinate synthetase A protein BAA_4678 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BAA_4678 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BAA_4679 PF02910 Fumarate reductase flavoprotein C-term BAA_4679 PF00890 FAD binding domain BAA_4680 PF00266 Aminotransferase class-V BAA_4681 PF02829 3H domain BAA_4681 PF08279 HTH domain BAA_4682 PF03473 MOSC domain BAA_4682 PF03475 3-alpha domain BAA_4683 PF01842 ACT domain BAA_4683 PF00800 Prephenate dehydratase BAA_4684 PF02687 FtsX-like permease family BAA_4685 PF02687 FtsX-like permease family BAA_4686 PF00005 ABC transporter BAA_4689 PF00072 Response regulator receiver domain BAA_4689 PF00486 Transcriptional regulatory protein, C terminal BAA_4690 PF09269 Domain of unknown function (DUF1967) BAA_4690 PF01926 50S ribosome-binding GTPase BAA_4690 PF01018 GTP1/OBG BAA_4691 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BAA_4691 PF14682 Sporulation initiation phospho-transferase B, C-terminal BAA_4692 PF01016 Ribosomal L27 protein BAA_4693 PF04327 Cysteine protease Prp BAA_4694 PF00829 Ribosomal prokaryotic L21 protein BAA_4696 PF00575 S1 RNA binding domain BAA_4696 PF10150 Ribonuclease E/G family BAA_4697 PF02163 Peptidase family M50 BAA_4698 PF01551 Peptidase family M23 BAA_4699 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BAA_4700 PF03775 Septum formation inhibitor MinC, C-terminal domain BAA_4702 PF04085 rod shape-determining protein MreC BAA_4704 PF04002 RadC-like JAB domain BAA_4705 PF02545 Maf-like protein BAA_4707 PF08245 Mur ligase middle domain BAA_4707 PF02875 Mur ligase family, glutamate ligase domain BAA_4708 PF10458 Valyl tRNA synthetase tRNA binding arm BAA_4708 PF00133 tRNA synthetases class I (I, L, M and V) BAA_4708 PF08264 Anticodon-binding domain of tRNA BAA_4710 PF01476 LysM domain BAA_4711 PF00202 Aminotransferase class-III BAA_4712 PF00490 Delta-aminolevulinic acid dehydratase BAA_4713 PF02602 Uroporphyrinogen-III synthase HemD BAA_4714 PF03900 Porphobilinogen deaminase, C-terminal domain BAA_4714 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BAA_4715 PF01578 Cytochrome C assembly protein BAA_4716 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BAA_4716 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BAA_4716 PF01488 Shikimate / quinate 5-dehydrogenase BAA_4717 PF01047 MarR family BAA_4718 PF02566 OsmC-like protein BAA_4719 PF01926 50S ribosome-binding GTPase BAA_4720 PF00004 ATPase family associated with various cellular activities (AAA) BAA_4720 PF05362 Lon protease (S16) C-terminal proteolytic domain BAA_4720 PF02190 ATP-dependent protease La (LON) substrate-binding domain BAA_4721 PF05362 Lon protease (S16) C-terminal proteolytic domain BAA_4721 PF00004 ATPase family associated with various cellular activities (AAA) BAA_4722 PF10431 C-terminal, D2-small domain, of ClpB protein BAA_4722 PF07724 AAA domain (Cdc48 subfamily) BAA_4722 PF06689 ClpX C4-type zinc finger BAA_4723 PF05697 Bacterial trigger factor protein (TF) BAA_4723 PF05698 Bacterial trigger factor protein (TF) C-terminus BAA_4723 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BAA_4726 PF08000 Bacterial PH domain BAA_4726 PF11724 YvbH-like oligomerisation region BAA_4730 PF12850 Calcineurin-like phosphoesterase superfamily domain BAA_4731 PF01725 Ham1 family BAA_4732 PF03725 3' exoribonuclease family, domain 2 BAA_4732 PF01138 3' exoribonuclease family, domain 1 BAA_4733 PF10646 Sporulation and spore germination BAA_4734 PF01177 Asp/Glu/Hydantoin racemase BAA_4735 PF07690 Major Facilitator Superfamily BAA_4738 PF00440 Bacterial regulatory proteins, tetR family BAA_4741 PF00196 Bacterial regulatory proteins, luxR family BAA_4742 PF00860 Permease family BAA_4744 PF07969 Amidohydrolase family BAA_4745 PF07969 Amidohydrolase family BAA_4746 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAA_4748 PF00528 Binding-protein-dependent transport system inner membrane component BAA_4749 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BAA_4749 PF00005 ABC transporter BAA_4750 PF00005 ABC transporter BAA_4750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BAA_4752 PF00072 Response regulator receiver domain BAA_4752 PF04397 LytTr DNA-binding domain BAA_4755 PF04024 PspC domain BAA_4756 PF01381 Helix-turn-helix BAA_4756 PF07883 Cupin domain BAA_4757 PF13536 Putative multidrug resistance efflux transporter BAA_4758 PF00230 Major intrinsic protein BAA_4759 PF02082 Transcriptional regulator BAA_4761 PF00005 ABC transporter BAA_4761 PF13732 Domain of unknown function (DUF4162) BAA_4762 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) BAA_4765 PF01618 MotA/TolQ/ExbB proton channel family BAA_4766 PF02557 D-alanyl-D-alanine carboxypeptidase BAA_4767 PF03061 Thioesterase superfamily BAA_4768 PF13085 2Fe-2S iron-sulfur cluster binding domain BAA_4768 PF13183 4Fe-4S dicluster domain BAA_4769 PF02910 Fumarate reductase flavoprotein C-term BAA_4769 PF00890 FAD binding domain BAA_4770 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BAA_4771 PF10702 Protein of unknown function (DUF2507) BAA_4772 PF08459 UvrC Helix-hairpin-helix N-terminal BAA_4772 PF01541 GIY-YIG catalytic domain BAA_4772 PF02151 UvrB/uvrC motif BAA_4773 PF00085 Thioredoxin BAA_4774 PF01012 Electron transfer flavoprotein domain BAA_4774 PF00766 Electron transfer flavoprotein FAD-binding domain BAA_4775 PF01012 Electron transfer flavoprotein domain BAA_4776 PF00378 Enoyl-CoA hydratase/isomerase BAA_4777 PF08359 YsiA-like protein, C-terminal region BAA_4777 PF00440 Bacterial regulatory proteins, tetR family BAA_4778 PF13193 AMP-binding enzyme C-terminal domain BAA_4778 PF00501 AMP-binding enzyme BAA_4782 PF01032 FecCD transport family BAA_4783 PF05163 DinB family BAA_4788 PF00005 ABC transporter BAA_4789 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAA_4789 PF00512 His Kinase A (phospho-acceptor) domain BAA_4790 PF00486 Transcriptional regulatory protein, C terminal BAA_4790 PF00072 Response regulator receiver domain BAA_4792 PF09962 Uncharacterized conserved protein (DUF2196) BAA_4793 PF17785 PUA-like domain BAA_4793 PF10672 S-adenosylmethionine-dependent methyltransferase BAA_4795 PF03992 Antibiotic biosynthesis monooxygenase BAA_4796 PF04203 Sortase domain BAA_4797 PF00005 ABC transporter BAA_4798 PF01032 FecCD transport family BAA_4799 PF01497 Periplasmic binding protein BAA_4800 PF05031 Iron Transport-associated domain BAA_4802 PF05031 Iron Transport-associated domain BAA_4803 PF05525 Branched-chain amino acid transport protein BAA_4804 PF01479 S4 domain BAA_4804 PF00849 RNA pseudouridylate synthase BAA_4805 PF01713 Smr domain BAA_4805 PF00488 MutS domain V BAA_4806 PF14791 DNA polymerase beta thumb BAA_4806 PF02811 PHP domain BAA_4806 PF14716 Helix-hairpin-helix domain BAA_4807 PF02674 Colicin V production protein BAA_4808 PF05164 Cell division protein ZapA BAA_4809 PF01351 Ribonuclease HII BAA_4809 PF11858 Domain of unknown function (DUF3378) BAA_4812 PF01336 OB-fold nucleic acid binding domain BAA_4812 PF00152 tRNA synthetases class II (D, K and N) BAA_4813 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BAA_4813 PF01588 Putative tRNA binding domain BAA_4813 PF03147 Ferredoxin-fold anticodon binding domain BAA_4813 PF03483 B3/4 domain BAA_4813 PF03484 tRNA synthetase B5 domain BAA_4814 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BAA_4814 PF01409 tRNA synthetases class II core domain (F) BAA_4815 PF00588 SpoU rRNA Methylase family BAA_4815 PF08032 RNA 2'-O ribose methyltransferase substrate binding BAA_4816 PF14098 Small, acid-soluble spore protein I BAA_4817 PF01966 HD domain BAA_4822 PF07690 Major Facilitator Superfamily BAA_4824 PF00440 Bacterial regulatory proteins, tetR family BAA_4824 PF16859 Tetracyclin repressor-like, C-terminal domain BAA_4825 PF05343 M42 glutamyl aminopeptidase BAA_4827 PF00453 Ribosomal protein L20 BAA_4828 PF01632 Ribosomal protein L35 BAA_4829 PF05198 Translation initiation factor IF-3, N-terminal domain BAA_4829 PF00707 Translation initiation factor IF-3, C-terminal domain BAA_4831 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BAA_4831 PF03129 Anticodon binding domain BAA_4831 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BAA_4831 PF02824 TGS domain BAA_4832 PF08812 YtxC-like family BAA_4833 PF07319 Primosomal protein DnaI N-terminus BAA_4833 PF01695 IstB-like ATP binding protein BAA_4834 PF07261 Replication initiation and membrane attachment BAA_4835 PF03477 ATP cone domain BAA_4836 PF02675 S-adenosylmethionine decarboxylase BAA_4838 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BAA_4838 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BAA_4839 PF01121 Dephospho-CoA kinase BAA_4840 PF02659 Putative manganese efflux pump BAA_4841 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BAA_4841 PF06827 Zinc finger found in FPG and IleRS BAA_4841 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BAA_4842 PF00476 DNA polymerase family A BAA_4842 PF01367 5'-3' exonuclease, C-terminal SAM fold BAA_4842 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BAA_4843 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAA_4843 PF00989 PAS fold BAA_4843 PF16736 Single Cache-like BAA_4843 PF00512 His Kinase A (phospho-acceptor) domain BAA_4844 PF00486 Transcriptional regulatory protein, C terminal BAA_4844 PF00072 Response regulator receiver domain BAA_4848 PF00056 lactate/malate dehydrogenase, NAD binding domain BAA_4848 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BAA_4849 PF00180 Isocitrate/isopropylmalate dehydrogenase BAA_4850 PF00285 Citrate synthase, C-terminal domain BAA_4851 PF04284 Protein of unknown function (DUF441) BAA_4852 PF01594 AI-2E family transporter BAA_4853 PF04186 FxsA cytoplasmic membrane protein BAA_4854 PF00224 Pyruvate kinase, barrel domain BAA_4854 PF02887 Pyruvate kinase, alpha/beta domain BAA_4854 PF00391 PEP-utilising enzyme, mobile domain BAA_4855 PF00365 Phosphofructokinase BAA_4856 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BAA_4857 PF17848 Acetyl-coA carboxylase zinc finger domain BAA_4857 PF01039 Carboxyl transferase domain BAA_4858 PF00392 Bacterial regulatory proteins, gntR family BAA_4859 PF03949 Malic enzyme, NAD binding domain BAA_4859 PF00390 Malic enzyme, N-terminal domain BAA_4860 PF02811 PHP domain BAA_4860 PF07733 Bacterial DNA polymerase III alpha NTPase domain BAA_4860 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BAA_4860 PF01336 OB-fold nucleic acid binding domain BAA_4860 PF14579 Helix-hairpin-helix motif BAA_4862 PF14034 Sporulation protein YtrH BAA_4864 PF02272 DHHA1 domain BAA_4864 PF01368 DHH family BAA_4866 PF14007 YtpI-like protein BAA_4869 PF00392 Bacterial regulatory proteins, gntR family BAA_4869 PF03061 Thioesterase superfamily BAA_4869 PF00571 CBS domain BAA_4869 PF07085 DRTGG domain BAA_4872 PF00557 Metallopeptidase family M24 BAA_4872 PF01321 Creatinase/Prolidase N-terminal domain BAA_4873 PF11518 Protein of unknown function (DUF3221) BAA_4879 PF12746 GNAT acetyltransferase BAA_4880 PF07883 Cupin domain BAA_4882 PF01381 Helix-turn-helix BAA_4884 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BAA_4884 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BAA_4886 PF00582 Universal stress protein family BAA_4890 PF14698 Argininosuccinate lyase C-terminal BAA_4890 PF00206 Lyase BAA_4891 PF00764 Arginosuccinate synthase BAA_4895 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BAA_4895 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BAA_4896 PF12787 EcsC protein family BAA_4899 PF00871 Acetokinase family BAA_4900 PF02384 N-6 DNA Methylase BAA_4901 PF08534 Redoxin BAA_4902 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BAA_4904 PF01513 ATP-NAD kinase BAA_4905 PF07969 Amidohydrolase family BAA_4907 PF00501 AMP-binding enzyme BAA_4907 PF13193 AMP-binding enzyme C-terminal domain BAA_4908 PF00269 Small, acid-soluble spore proteins, alpha/beta type BAA_4909 PF02568 Thiamine biosynthesis protein (ThiI) BAA_4909 PF02926 THUMP domain BAA_4910 PF00266 Aminotransferase class-V BAA_4911 PF06160 Septation ring formation regulator, EzrA BAA_4913 PF03466 LysR substrate binding domain BAA_4913 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAA_4914 PF00892 EamA-like transporter family BAA_4917 PF13185 GAF domain BAA_4918 PF01053 Cys/Met metabolism PLP-dependent enzyme BAA_4919 PF01479 S4 domain BAA_4919 PF00163 Ribosomal protein S4/S9 N-terminal domain BAA_4922 PF00579 tRNA synthetases class I (W and Y) BAA_4922 PF01479 S4 domain BAA_4924 PF08281 Sigma-70, region 4 BAA_4924 PF04542 Sigma-70 region 2 BAA_4926 PF00501 AMP-binding enzyme BAA_4926 PF13193 AMP-binding enzyme C-terminal domain BAA_4927 PF00583 Acetyltransferase (GNAT) family BAA_4928 PF00571 CBS domain BAA_4929 PF00850 Histone deacetylase domain BAA_4931 PF00486 Transcriptional regulatory protein, C terminal BAA_4931 PF00072 Response regulator receiver domain BAA_4932 PF00512 His Kinase A (phospho-acceptor) domain BAA_4932 PF00672 HAMP domain BAA_4932 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAA_4932 PF13426 PAS domain BAA_4933 PF12796 Ankyrin repeats (3 copies) BAA_4934 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BAA_4935 PF01741 Large-conductance mechanosensitive channel, MscL BAA_4940 PF00356 Bacterial regulatory proteins, lacI family BAA_4941 PF07537 CamS sex pheromone cAM373 precursor BAA_4942 PF11009 Protein of unknown function (DUF2847) BAA_4944 PF02073 Thermophilic metalloprotease (M29) BAA_4947 PF13302 Acetyltransferase (GNAT) domain BAA_4948 PF08245 Mur ligase middle domain BAA_4948 PF02875 Mur ligase family, glutamate ligase domain BAA_4948 PF01225 Mur ligase family, catalytic domain BAA_4950 PF09397 Ftsk gamma domain BAA_4950 PF17854 FtsK alpha domain BAA_4950 PF01580 FtsK/SpoIIIE family BAA_4952 PF14794 Domain of unknown function (DUF4479) BAA_4952 PF01588 Putative tRNA binding domain BAA_4953 PF07285 Protein of unknown function (DUF1444) BAA_4954 PF00085 Thioredoxin BAA_4955 PF01931 Protein of unknown function DUF84 BAA_4956 PF05343 M42 glutamyl aminopeptidase BAA_4958 PF00753 Metallo-beta-lactamase superfamily BAA_4959 PF02390 Putative methyltransferase BAA_4960 PF14165 YtzH-like protein BAA_4961 PF01636 Phosphotransferase enzyme family BAA_4962 PF00128 Alpha amylase, catalytic domain BAA_4962 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BAA_4962 PF17999 Pullulanase N1-terminal domain BAA_4963 PF02834 LigT like Phosphoesterase BAA_4966 PF08220 DeoR-like helix-turn-helix domain BAA_4967 PF00849 RNA pseudouridylate synthase BAA_4967 PF01479 S4 domain BAA_4968 PF14667 Polysaccharide biosynthesis C-terminal domain BAA_4968 PF01943 Polysaccharide biosynthesis protein BAA_4971 PF07690 Major Facilitator Superfamily BAA_4972 PF01022 Bacterial regulatory protein, arsR family BAA_4973 PF08327 Activator of Hsp90 ATPase homolog 1-like protein BAA_4975 PF10957 Sporulation protein Cse60 BAA_4979 PF06800 Sugar transport protein BAA_4982 PF02391 MoaE protein BAA_4983 PF03205 Molybdopterin guanine dinucleotide synthesis protein B BAA_4984 PF03453 MoeA N-terminal region (domain I and II) BAA_4984 PF00994 Probable molybdopterin binding domain BAA_4984 PF03454 MoeA C-terminal region (domain IV) BAA_4985 PF01967 MoaC family BAA_4986 PF00899 ThiF family BAA_4992 PF00581 Rhodanese-like domain BAA_4994 PF00561 alpha/beta hydrolase fold BAA_4997 PF03323 Bacillus/Clostridium GerA spore germination protein BAA_4998 PF03845 Spore germination protein BAA_5004 PF13603 Leucyl-tRNA synthetase, Domain 2 BAA_5004 PF00133 tRNA synthetases class I (I, L, M and V) BAA_5004 PF08264 Anticodon-binding domain of tRNA BAA_5004 PF09334 tRNA synthetases class I (M) BAA_5005 PF07690 Major Facilitator Superfamily BAA_5006 PF00999 Sodium/hydrogen exchanger family BAA_5007 PF02080 TrkA-C domain BAA_5008 PF00589 Phage integrase family BAA_5010 PF00005 ABC transporter BAA_5011 PF07786 Protein of unknown function (DUF1624) BAA_5011 PF04235 Protein of unknown function (DUF418) BAA_5013 PF10732 Protein of unknown function (DUF2524) BAA_5014 PF16199 Radical_SAM C-terminal domain BAA_5014 PF04055 Radical SAM superfamily BAA_5015 PF06962 Putative rRNA methylase BAA_5016 PF13732 Domain of unknown function (DUF4162) BAA_5016 PF00005 ABC transporter BAA_5018 PF01177 Asp/Glu/Hydantoin racemase BAA_5021 PF10776 Protein of unknown function (DUF2600) BAA_5022 PF12146 Serine aminopeptidase, S33 BAA_5024 PF00132 Bacterial transferase hexapeptide (six repeats) BAA_5025 PF01569 PAP2 superfamily BAA_5026 PF13439 Glycosyltransferase Family 4 BAA_5026 PF00534 Glycosyl transferases group 1 BAA_5027 PF12804 MobA-like NTP transferase domain BAA_5028 PF00994 Probable molybdopterin binding domain BAA_5031 PF02772 S-adenosylmethionine synthetase, central domain BAA_5031 PF02773 S-adenosylmethionine synthetase, C-terminal domain BAA_5031 PF00438 S-adenosylmethionine synthetase, N-terminal domain BAA_5034 PF01293 Phosphoenolpyruvate carboxykinase BAA_5039 PF01784 NIF3 (NGG1p interacting factor 3) BAA_5040 PF13426 PAS domain BAA_5040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAA_5040 PF13188 PAS domain BAA_5040 PF00512 His Kinase A (phospho-acceptor) domain BAA_5040 PF00989 PAS fold BAA_5041 PF08447 PAS fold BAA_5041 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAA_5041 PF00512 His Kinase A (phospho-acceptor) domain BAA_5041 PF00989 PAS fold BAA_5042 PF08386 TAP-like protein BAA_5042 PF00561 alpha/beta hydrolase fold BAA_5048 PF00005 ABC transporter BAA_5049 PF00528 Binding-protein-dependent transport system inner membrane component BAA_5054 PF00293 NUDIX domain BAA_5058 PF02664 S-Ribosylhomocysteinase (LuxS) BAA_5059 PF00484 Carbonic anhydrase BAA_5060 PF01809 Putative membrane protein insertion efficiency factor BAA_5061 PF01654 Cytochrome bd terminal oxidase subunit I BAA_5062 PF02322 Cytochrome bd terminal oxidase subunit II BAA_5063 PF10676 Spore germination protein gerPA/gerPF BAA_5067 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BAA_5067 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BAA_5072 PF04012 PspA/IM30 family BAA_5075 PF07670 Nucleoside recognition BAA_5075 PF02421 Ferrous iron transport protein B BAA_5075 PF17910 FeoB cytosolic helical domain BAA_5075 PF07664 Ferrous iron transport protein B C terminus BAA_5078 PF09515 Thiamine transporter protein (Thia_YuaJ) BAA_5079 PF00672 HAMP domain BAA_5079 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAA_5079 PF00512 His Kinase A (phospho-acceptor) domain BAA_5080 PF00072 Response regulator receiver domain BAA_5080 PF00486 Transcriptional regulatory protein, C terminal BAA_5085 PF00156 Phosphoribosyl transferase domain BAA_5086 PF00781 Diacylglycerol kinase catalytic domain BAA_5090 PF00248 Aldo/keto reductase family BAA_5093 PF09335 SNARE associated Golgi protein BAA_5094 PF00398 Ribosomal RNA adenine dimethylase BAA_5095 PF02687 FtsX-like permease family BAA_5096 PF00005 ABC transporter BAA_5097 PF06445 GyrI-like small molecule binding domain BAA_5097 PF12833 Helix-turn-helix domain BAA_5098 PF00486 Transcriptional regulatory protein, C terminal BAA_5098 PF00072 Response regulator receiver domain BAA_5099 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAA_5103 PF02687 FtsX-like permease family BAA_5104 PF00005 ABC transporter BAA_5108 PF02447 GntP family permease BAA_5111 PF07071 KDGP aldolase BAA_5112 PF03841 L-seryl-tRNA selenium transferase BAA_5113 PF01979 Amidohydrolase family BAA_5116 PF02557 D-alanyl-D-alanine carboxypeptidase BAA_5117 PF00512 His Kinase A (phospho-acceptor) domain BAA_5117 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAA_5118 PF00486 Transcriptional regulatory protein, C terminal BAA_5118 PF00072 Response regulator receiver domain BAA_5119 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BAA_5119 PF13378 Enolase C-terminal domain-like BAA_5120 PF00501 AMP-binding enzyme BAA_5120 PF13193 AMP-binding enzyme C-terminal domain BAA_5121 PF00378 Enoyl-CoA hydratase/isomerase BAA_5122 PF00561 alpha/beta hydrolase fold BAA_5123 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BAA_5123 PF16582 Middle domain of thiamine pyrophosphate BAA_5123 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BAA_5124 PF00425 chorismate binding enzyme BAA_5125 PF01040 UbiA prenyltransferase family BAA_5126 PF01258 Prokaryotic dksA/traR C4-type zinc finger BAA_5127 PF00313 'Cold-shock' DNA-binding domain BAA_5131 PF00343 Carbohydrate phosphorylase BAA_5132 PF00534 Glycosyl transferases group 1 BAA_5132 PF08323 Starch synthase catalytic domain BAA_5133 PF00483 Nucleotidyl transferase BAA_5134 PF00483 Nucleotidyl transferase BAA_5135 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BAA_5135 PF02806 Alpha amylase, C-terminal all-beta domain BAA_5135 PF00128 Alpha amylase, catalytic domain BAA_5136 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BAA_5136 PF00056 lactate/malate dehydrogenase, NAD binding domain BAA_5163 PF02308 MgtC family BAA_5164 PF08868 YugN-like family BAA_5165 PF02254 TrkA-N domain BAA_5165 PF07885 Ion channel BAA_5166 PF00342 Phosphoglucose isomerase BAA_5167 PF04070 Domain of unknown function (DUF378) BAA_5168 PF00575 S1 RNA binding domain BAA_5169 PF00155 Aminotransferase class I and II BAA_5170 PF01037 Lrp/AsnC ligand binding domain BAA_5171 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BAA_5171 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BAA_5172 PF00561 alpha/beta hydrolase fold BAA_5172 PF08386 TAP-like protein BAA_5174 PF00155 Aminotransferase class I and II BAA_5177 PF08810 Kinase associated protein B BAA_5178 PF00929 Exonuclease BAA_5179 PF03600 Citrate transporter BAA_5183 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BAA_5183 PF03129 Anticodon binding domain BAA_5184 PF03061 Thioesterase superfamily BAA_5186 PF02632 BioY family BAA_5188 PF00483 Nucleotidyl transferase BAA_5189 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BAA_5189 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BAA_5189 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BAA_5189 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BAA_5190 PF10372 Bacterial membrane-spanning protein N-terminus BAA_5190 PF02457 DisA bacterial checkpoint controller nucleotide-binding BAA_5191 PF00883 Cytosol aminopeptidase family, catalytic domain BAA_5191 PF02789 Cytosol aminopeptidase family, N-terminal domain BAA_5192 PF06725 3D domain BAA_5194 PF00293 NUDIX domain BAA_5194 PF13344 Haloacid dehalogenase-like hydrolase BAA_5195 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAA_5196 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAA_5199 PF06445 GyrI-like small molecule binding domain BAA_5202 PF04463 Protein of unknown function (DUF523) BAA_5206 PF01521 Iron-sulphur cluster biosynthesis BAA_5207 PF01678 Diaminopimelate epimerase BAA_5208 PF07293 Protein of unknown function (DUF1450) BAA_5209 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAA_5211 PF09383 NIL domain BAA_5211 PF00005 ABC transporter BAA_5212 PF03649 Uncharacterised protein family (UPF0014) BAA_5213 PF03831 PhnA domain BAA_5213 PF08274 PhnA Zinc-Ribbon BAA_5221 PF07315 Protein of unknown function (DUF1462) BAA_5222 PF01106 NifU-like domain BAA_5225 PF04608 Phosphatidylglycerophosphatase A BAA_5227 PF02525 Flavodoxin-like fold BAA_5228 PF13344 Haloacid dehalogenase-like hydrolase BAA_5230 PF01934 Protein of unknown function DUF86 BAA_5231 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BAA_5234 PF06265 Protein of unknown function (DUF1027) BAA_5235 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BAA_5236 PF13411 MerR HTH family regulatory protein BAA_5236 PF07739 TipAS antibiotic-recognition domain BAA_5237 PF10086 YhfC intramembrane metalloprotease BAA_5241 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BAA_5241 PF04055 Radical SAM superfamily BAA_5242 PF01551 Peptidase family M23 BAA_5244 PF08827 Domain of unknown function (DUF1805) BAA_5245 PF02872 5'-nucleotidase, C-terminal domain BAA_5247 PF03551 Transcriptional regulator PadR-like family BAA_5248 PF04892 VanZ like family BAA_5249 PF01458 Uncharacterized protein family (UPF0051) BAA_5250 PF01592 NifU-like N terminal domain BAA_5251 PF00266 Aminotransferase class-V BAA_5252 PF01458 Uncharacterized protein family (UPF0051) BAA_5253 PF00005 ABC transporter BAA_5254 PF03180 NLPA lipoprotein BAA_5255 PF03180 NLPA lipoprotein BAA_5256 PF00528 Binding-protein-dependent transport system inner membrane component BAA_5257 PF00005 ABC transporter BAA_5257 PF09383 NIL domain BAA_5261 PF00085 Thioredoxin BAA_5262 PF01751 Toprim domain BAA_5263 PF01597 Glycine cleavage H-protein BAA_5264 PF03960 ArsC family BAA_5272 PF00056 lactate/malate dehydrogenase, NAD binding domain BAA_5272 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BAA_5276 PF13305 Tetracyclin repressor-like, C-terminal domain BAA_5276 PF00440 Bacterial regulatory proteins, tetR family BAA_5277 PF00753 Metallo-beta-lactamase superfamily BAA_5278 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BAA_5278 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BAA_5278 PF02770 Acyl-CoA dehydrogenase, middle domain BAA_5280 PF02803 Thiolase, C-terminal domain BAA_5280 PF00108 Thiolase, N-terminal domain BAA_5281 PF00378 Enoyl-CoA hydratase/isomerase BAA_5281 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BAA_5281 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BAA_5282 PF14115 YuzL-like protein BAA_5283 PF00768 D-alanyl-D-alanine carboxypeptidase BAA_5283 PF07943 Penicillin-binding protein 5, C-terminal domain BAA_5284 PF01619 Proline dehydrogenase BAA_5285 PF10835 Protein of unknown function (DUF2573) BAA_5286 PF01910 Thiamine-binding protein BAA_5287 PF02743 Cache domain BAA_5287 PF00672 HAMP domain BAA_5287 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAA_5291 PF07690 Major Facilitator Superfamily BAA_5292 PF13520 Amino acid permease BAA_5294 PF02096 60Kd inner membrane protein BAA_5296 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BAA_5296 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BAA_5303 PF09335 SNARE associated Golgi protein BAA_5305 PF03734 L,D-transpeptidase catalytic domain BAA_5305 PF17969 L,D-transpeptidase C-terminal domain BAA_5306 PF00486 Transcriptional regulatory protein, C terminal BAA_5306 PF00072 Response regulator receiver domain BAA_5307 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAA_5307 PF16736 Single Cache-like BAA_5307 PF00989 PAS fold BAA_5307 PF00512 His Kinase A (phospho-acceptor) domain BAA_5309 PF08264 Anticodon-binding domain of tRNA BAA_5309 PF09334 tRNA synthetases class I (M) BAA_5311 PF02743 Cache domain BAA_5311 PF00672 HAMP domain BAA_5311 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAA_5312 PF01883 Iron-sulfur cluster assembly protein BAA_5313 PF07504 Fungalysin/Thermolysin Propeptide Motif BAA_5313 PF03413 Peptidase propeptide and YPEB domain BAA_5313 PF01447 Thermolysin metallopeptidase, catalytic domain BAA_5313 PF02868 Thermolysin metallopeptidase, alpha-helical domain BAA_5314 PF17954 Quercetinase C-terminal cupin domain BAA_5314 PF02678 Pirin BAA_5315 PF01047 MarR family BAA_5317 PF00999 Sodium/hydrogen exchanger family BAA_5318 PF02080 TrkA-C domain BAA_5319 PF01235 Sodium:alanine symporter family BAA_5320 PF00210 Ferritin-like domain BAA_5324 PF03641 Possible lysine decarboxylase BAA_5326 PF00210 Ferritin-like domain BAA_5329 PF01773 Na+ dependent nucleoside transporter N-terminus BAA_5329 PF07662 Na+ dependent nucleoside transporter C-terminus BAA_5330 PF01773 Na+ dependent nucleoside transporter N-terminus BAA_5330 PF07662 Na+ dependent nucleoside transporter C-terminus BAA_5331 PF01235 Sodium:alanine symporter family BAA_5332 PF01235 Sodium:alanine symporter family BAA_5333 PF13460 NAD(P)H-binding BAA_5338 PF00248 Aldo/keto reductase family BAA_5339 PF07690 Major Facilitator Superfamily BAA_5340 PF01638 HxlR-like helix-turn-helix BAA_5341 PF07849 Protein of unknown function (DUF1641) BAA_5342 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAA_5343 PF00579 tRNA synthetases class I (W and Y) BAA_5343 PF01479 S4 domain BAA_5344 PF01565 FAD binding domain BAA_5344 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BAA_5346 PF17202 Single cache domain 3 BAA_5346 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAA_5346 PF00672 HAMP domain BAA_5348 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BAA_5349 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BAA_5352 PF13302 Acetyltransferase (GNAT) domain BAA_5353 PF06146 Phosphate-starvation-inducible E BAA_5356 PF00005 ABC transporter BAA_5357 PF01032 FecCD transport family BAA_5358 PF01032 FecCD transport family BAA_5360 PF00072 Response regulator receiver domain BAA_5360 PF00486 Transcriptional regulatory protein, C terminal BAA_5363 PF01668 SmpB protein BAA_5365 PF00773 RNB domain BAA_5365 PF08206 Ribonuclease B OB domain BAA_5365 PF17876 Cold shock domain BAA_5365 PF00575 S1 RNA binding domain BAA_5366 PF12146 Serine aminopeptidase, S33 BAA_5367 PF03840 Preprotein translocase SecG subunit BAA_5368 PF04172 LrgB-like family BAA_5369 PF03788 LrgA family BAA_5370 PF01156 Inosine-uridine preferring nucleoside hydrolase BAA_5388 PF04860 Phage portal protein BAA_5393 PF00589 Phage integrase family BAA_5393 PF02899 Phage integrase, N-terminal SAM-like domain BAA_5394 PF00113 Enolase, C-terminal TIM barrel domain BAA_5394 PF03952 Enolase, N-terminal domain BAA_5395 PF01676 Metalloenzyme superfamily BAA_5395 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BAA_5396 PF00121 Triosephosphate isomerase BAA_5397 PF00162 Phosphoglycerate kinase BAA_5398 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BAA_5398 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BAA_5399 PF04198 Putative sugar-binding domain BAA_5401 PF04963 Sigma-54 factor, core binding domain BAA_5401 PF00309 Sigma-54 factor, Activator interacting domain (AID) BAA_5401 PF04552 Sigma-54, DNA binding domain BAA_5405 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BAA_5406 PF07451 Stage V sporulation protein AD (SpoVAD) BAA_5407 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BAA_5409 PF04239 Protein of unknown function (DUF421) BAA_5410 PF00574 Clp protease BAA_5411 PF00381 PTS HPr component phosphorylation site BAA_5412 PF02650 WhiA C-terminal HTH domain BAA_5412 PF14527 WhiA LAGLIDADG-like domain BAA_5412 PF10298 WhiA N-terminal LAGLIDADG-like domain BAA_5413 PF01933 Uncharacterised protein family UPF0052 BAA_5414 PF03668 P-loop ATPase protein family BAA_5415 PF00293 NUDIX domain BAA_5417 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAA_5419 PF14602 Hexapeptide repeat of succinyl-transferase BAA_5420 PF13419 Haloacid dehalogenase-like hydrolase BAA_5421 PF01790 Prolipoprotein diacylglyceryl transferase BAA_5422 PF07475 HPr Serine kinase C-terminal domain BAA_5422 PF02603 HPr Serine kinase N terminus BAA_5423 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV BAA_5425 PF17760 UvrA interaction domain BAA_5425 PF00005 ABC transporter BAA_5425 PF17755 UvrA DNA-binding domain BAA_5426 PF17757 UvrB interaction domain BAA_5426 PF12344 Ultra-violet resistance protein B BAA_5426 PF02151 UvrB/uvrC motif BAA_5426 PF00271 Helicase conserved C-terminal domain BAA_5426 PF04851 Type III restriction enzyme, res subunit BAA_5427 PF12323 Helix-turn-helix domain BAA_5427 PF01385 Probable transposase BAA_5427 PF07282 Putative transposase DNA-binding domain BAA_5430 PF07739 TipAS antibiotic-recognition domain BAA_5430 PF13411 MerR HTH family regulatory protein BAA_5435 PF03601 Conserved hypothetical protein 698 BAA_5436 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAA_5436 PF03466 LysR substrate binding domain BAA_5437 PF09278 MerR, DNA binding BAA_5437 PF00376 MerR family regulatory protein BAA_5438 PF03358 NADPH-dependent FMN reductase BAA_5441 PF00005 ABC transporter BAA_5441 PF00664 ABC transporter transmembrane region BAA_5442 PF17820 PDZ domain BAA_5443 PF01471 Putative peptidoglycan binding domain BAA_5443 PF03572 Peptidase family S41 BAA_5443 PF17820 PDZ domain BAA_5444 PF02687 FtsX-like permease family BAA_5444 PF18075 FtsX extracellular domain BAA_5445 PF00005 ABC transporter BAA_5446 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BAA_5450 PF07516 SecA Wing and Scaffold domain BAA_5450 PF01043 SecA preprotein cross-linking domain BAA_5450 PF07517 SecA DEAD-like domain BAA_5450 PF02810 SEC-C motif BAA_5451 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BAA_5451 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus BAA_5453 PF00313 'Cold-shock' DNA-binding domain BAA_5455 PF00271 Helicase conserved C-terminal domain BAA_5455 PF04851 Type III restriction enzyme, res subunit BAA_5456 PF00877 NlpC/P60 family BAA_5456 PF01476 LysM domain BAA_5457 PF01638 HxlR-like helix-turn-helix BAA_5458 PF02645 Uncharacterised protein, DegV family COG1307 BAA_5459 PF09186 Domain of unknown function (DUF1949) BAA_5459 PF01205 Uncharacterized protein family UPF0029 BAA_5460 PF03816 Cell envelope-related transcriptional attenuator domain BAA_5461 PF02350 UDP-N-acetylglucosamine 2-epimerase BAA_5462 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BAA_5462 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BAA_5462 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BAA_5463 PF00953 Glycosyl transferase family 4 BAA_5465 PF03610 PTS system fructose IIA component BAA_5465 PF00874 PRD domain BAA_5465 PF00158 Sigma-54 interaction domain BAA_5467 PF02417 Chromate transporter BAA_5468 PF04794 YdjC-like protein BAA_5469 PF02056 Family 4 glycosyl hydrolase BAA_5469 PF11975 Family 4 glycosyl hydrolase C-terminal domain BAA_5470 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BAA_5471 PF02378 Phosphotransferase system, EIIC BAA_5472 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BAA_5474 PF02675 S-adenosylmethionine decarboxylase BAA_5475 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BAA_5476 PF02378 Phosphotransferase system, EIIC BAA_5477 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BAA_5478 PF00375 Sodium:dicarboxylate symporter family BAA_5480 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BAA_5482 PF03466 LysR substrate binding domain BAA_5482 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BAA_5488 PF01654 Cytochrome bd terminal oxidase subunit I BAA_5489 PF02322 Cytochrome bd terminal oxidase subunit II BAA_5490 PF02040 Arsenical pump membrane protein BAA_5491 PF13667 ThiC-associated domain BAA_5491 PF01964 Radical SAM ThiC family BAA_5493 PF02652 L-lactate permease BAA_5495 PF09988 Uncharacterized metal-binding protein (DUF2227) BAA_5497 PF00884 Sulfatase BAA_5498 PF01063 Amino-transferase class IV BAA_5501 PF01476 LysM domain BAA_5501 PF00877 NlpC/P60 family BAA_5502 PF01773 Na+ dependent nucleoside transporter N-terminus BAA_5502 PF07662 Na+ dependent nucleoside transporter C-terminus BAA_5507 PF02028 BCCT, betaine/carnitine/choline family transporter BAA_5508 PF06725 3D domain BAA_5508 PF01476 LysM domain BAA_5513 PF04434 SWIM zinc finger BAA_5514 PF00176 SNF2 family N-terminal domain BAA_5514 PF12419 SNF2 Helicase protein BAA_5514 PF00271 Helicase conserved C-terminal domain BAA_5520 PF04542 Sigma-70 region 2 BAA_5520 PF04545 Sigma-70, region 4 BAA_5521 PF04893 Yip1 domain BAA_5522 PF12704 MacB-like periplasmic core domain BAA_5522 PF02687 FtsX-like permease family BAA_5523 PF00005 ABC transporter BAA_5527 PF07690 Major Facilitator Superfamily BAA_5530 PF00512 His Kinase A (phospho-acceptor) domain BAA_5530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAA_5530 PF16736 Single Cache-like BAA_5530 PF00989 PAS fold BAA_5531 PF00072 Response regulator receiver domain BAA_5531 PF00486 Transcriptional regulatory protein, C terminal BAA_5532 PF16363 GDP-mannose 4,6 dehydratase BAA_5533 PF03816 Cell envelope-related transcriptional attenuator domain BAA_5534 PF07977 FabA-like domain BAA_5536 PF02350 UDP-N-acetylglucosamine 2-epimerase BAA_5537 PF08239 Bacterial SH3 domain BAA_5537 PF00005 ABC transporter BAA_5538 PF01061 ABC-2 type transporter BAA_5539 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BAA_5539 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BAA_5539 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BAA_5548 PF12116 Stage III sporulation protein D BAA_5551 PF01551 Peptidase family M23 BAA_5553 PF00005 ABC transporter BAA_5556 PF08486 Stage II sporulation protein BAA_5557 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BAA_5559 PF06612 Protein of unknown function (DUF1146) BAA_5560 PF00361 Proton-conducting membrane transporter BAA_5561 PF00361 Proton-conducting membrane transporter BAA_5562 PF00361 Proton-conducting membrane transporter BAA_5562 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BAA_5562 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus BAA_5563 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BAA_5564 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BAA_5566 PF00146 NADH dehydrogenase BAA_5567 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BAA_5568 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BAA_5569 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BAA_5570 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BAA_5571 PF00990 Diguanylate cyclase, GGDEF domain BAA_5571 PF03707 Bacterial signalling protein N terminal repeat BAA_5571 PF00563 EAL domain BAA_5574 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BAA_5574 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BAA_5575 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BAA_5575 PF02874 ATP synthase alpha/beta family, beta-barrel domain BAA_5576 PF00231 ATP synthase BAA_5577 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BAA_5577 PF02874 ATP synthase alpha/beta family, beta-barrel domain BAA_5577 PF00306 ATP synthase alpha/beta chain, C terminal domain BAA_5578 PF00213 ATP synthase delta (OSCP) subunit BAA_5579 PF00430 ATP synthase B/B' CF(0) BAA_5580 PF00137 ATP synthase subunit C BAA_5581 PF00119 ATP synthase A chain BAA_5582 PF03899 ATP synthase I chain BAA_5586 PF00464 Serine hydroxymethyltransferase BAA_5587 PF04260 Protein of unknown function (DUF436) BAA_5588 PF02502 Ribose/Galactose Isomerase BAA_5589 PF01451 Low molecular weight phosphotyrosine protein phosphatase BAA_5590 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BAA_5591 PF07681 DoxX BAA_5592 PF01613 Flavin reductase like domain BAA_5594 PF02659 Putative manganese efflux pump BAA_5595 PF03481 Putative GTP-binding controlling metal-binding BAA_5595 PF01300 Telomere recombination BAA_5597 PF09551 Stage II sporulation protein R (spore_II_R) BAA_5598 PF17827 PrmC N-terminal domain BAA_5598 PF13847 Methyltransferase domain BAA_5599 PF00472 RF-1 domain BAA_5599 PF03462 PCRF domain BAA_5600 PF00265 Thymidine kinase BAA_5601 PF01197 Ribosomal protein L31 BAA_5602 PF07498 Rho termination factor, N-terminal domain BAA_5602 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BAA_5602 PF07497 Rho termination factor, RNA-binding domain BAA_5603 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BAA_5604 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BAA_5605 PF01116 Fructose-bisphosphate aldolase class-II BAA_5606 PF00072 Response regulator receiver domain BAA_5607 PF10740 Domain of unknown function (DUF2529) BAA_5608 PF06418 CTP synthase N-terminus BAA_5608 PF00117 Glutamine amidotransferase class-I BAA_5609 PF05066 HB1, ASXL, restriction endonuclease HTH domain BAA_5611 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BAA_5611 PF02770 Acyl-CoA dehydrogenase, middle domain BAA_5611 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BAA_5612 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BAA_5612 PF02770 Acyl-CoA dehydrogenase, middle domain BAA_5612 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BAA_5613 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BAA_5613 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BAA_5614 PF02803 Thiolase, C-terminal domain BAA_5614 PF00108 Thiolase, N-terminal domain BAA_5615 PF02754 Cysteine-rich domain BAA_5615 PF13183 4Fe-4S dicluster domain BAA_5616 PF13091 PLD-like domain BAA_5617 PF03851 UV-endonuclease UvdE BAA_5618 PF00990 Diguanylate cyclase, GGDEF domain BAA_5618 PF00563 EAL domain BAA_5618 PF03707 Bacterial signalling protein N terminal repeat BAA_5622 PF00072 Response regulator receiver domain BAA_5622 PF00196 Bacterial regulatory proteins, luxR family BAA_5623 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAA_5623 PF07730 Histidine kinase BAA_5625 PF00005 ABC transporter BAA_5626 PF00557 Metallopeptidase family M24 BAA_5632 PF04389 Peptidase family M28 BAA_5632 PF02225 PA domain BAA_5636 PF08281 Sigma-70, region 4 BAA_5636 PF04542 Sigma-70 region 2 BAA_5637 PF00750 tRNA synthetases class I (R) BAA_5637 PF05746 DALR anticodon binding domain BAA_5637 PF03485 Arginyl tRNA synthetase N terminal domain BAA_5638 PF09148 Domain of unknown function (DUF1934) BAA_5639 PF02016 LD-carboxypeptidase N-terminal domain BAA_5639 PF17676 LD-carboxypeptidase C-terminal domain BAA_5643 PF00491 Arginase family BAA_5644 PF17284 Spermidine synthase tetramerisation domain BAA_5645 PF07690 Major Facilitator Superfamily BAA_5646 PF13411 MerR HTH family regulatory protein BAA_5648 PF03009 Glycerophosphoryl diester phosphodiesterase family BAA_5649 PF00912 Transglycosylase BAA_5649 PF00905 Penicillin binding protein transpeptidase domain BAA_5650 PF08741 YwhD family BAA_5651 PF02163 Peptidase family M50 BAA_5652 PF01361 Tautomerase enzyme BAA_5653 PF01966 HD domain BAA_5654 PF01497 Periplasmic binding protein BAA_5655 PF00005 ABC transporter BAA_5656 PF01032 FecCD transport family BAA_5659 PF07293 Protein of unknown function (DUF1450) BAA_5662 PF03099 Biotin/lipoate A/B protein ligase family BAA_5663 PF01515 Phosphate acetyl/butaryl transferase BAA_5665 PF00768 D-alanyl-D-alanine carboxypeptidase BAA_5665 PF07943 Penicillin-binding protein 5, C-terminal domain BAA_5666 PF07486 Cell Wall Hydrolase BAA_5667 PF09671 Spore coat protein (Spore_GerQ) BAA_5668 PF04241 Protein of unknown function (DUF423) BAA_5672 PF00860 Permease family BAA_5674 PF12823 Domain of unknown function (DUF3817) BAA_5675 PF03167 Uracil DNA glycosylase superfamily BAA_5676 PF12679 ABC-2 family transporter protein BAA_5677 PF00005 ABC transporter BAA_5678 PF13472 GDSL-like Lipase/Acylhydrolase family BAA_5679 PF00356 Bacterial regulatory proteins, lacI family BAA_5679 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BAA_5681 PF00742 Homoserine dehydrogenase BAA_5681 PF03447 Homoserine dehydrogenase, NAD binding domain BAA_5681 PF01842 ACT domain BAA_5682 PF04204 Homoserine O-succinyltransferase BAA_5683 PF01053 Cys/Met metabolism PLP-dependent enzyme BAA_5686 PF13419 Haloacid dehalogenase-like hydrolase BAA_5687 PF00027 Cyclic nucleotide-binding domain BAA_5688 PF02525 Flavodoxin-like fold BAA_5689 PF00196 Bacterial regulatory proteins, luxR family BAA_5689 PF00072 Response regulator receiver domain BAA_5692 PF08543 Phosphomethylpyrimidine kinase BAA_5693 PF00990 Diguanylate cyclase, GGDEF domain BAA_5693 PF07694 5TMR of 5TMR-LYT BAA_5694 PF04328 Selenoprotein, putative BAA_5695 PF02554 Carbon starvation protein CstA BAA_5695 PF13722 5TM C-terminal transporter carbon starvation CstA BAA_5696 PF04397 LytTr DNA-binding domain BAA_5696 PF00072 Response regulator receiver domain BAA_5697 PF07690 Major Facilitator Superfamily BAA_5699 PF03808 Glycosyl transferase WecB/TagA/CpsF family BAA_5702 PF03458 UPF0126 domain BAA_5703 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAA_5705 PF03061 Thioesterase superfamily BAA_5707 PF00535 Glycosyl transferase family 2 BAA_5708 PF00005 ABC transporter BAA_5708 PF12848 ABC transporter BAA_5713 PF00535 Glycosyl transferase family 2 BAA_5714 PF00440 Bacterial regulatory proteins, tetR family BAA_5715 PF00873 AcrB/AcrD/AcrF family BAA_5716 PF01641 SelR domain BAA_5716 PF01625 Peptide methionine sulfoxide reductase BAA_5718 PF01594 AI-2E family transporter BAA_5719 PF04172 LrgB-like family BAA_5720 PF03788 LrgA family BAA_5721 PF04397 LytTr DNA-binding domain BAA_5721 PF00072 Response regulator receiver domain BAA_5722 PF06580 Histidine kinase BAA_5722 PF13492 GAF domain BAA_5722 PF07694 5TMR of 5TMR-LYT BAA_5722 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAA_5724 PF07690 Major Facilitator Superfamily BAA_5725 PF02028 BCCT, betaine/carnitine/choline family transporter BAA_5726 PF02898 Nitric oxide synthase, oxygenase domain BAA_5727 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BAA_5727 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BAA_5729 PF02293 AmiS/UreI family transporter BAA_5731 PF16363 GDP-mannose 4,6 dehydratase BAA_5732 PF03006 Haemolysin-III related BAA_5734 PF00271 Helicase conserved C-terminal domain BAA_5734 PF03880 DbpA RNA binding domain BAA_5734 PF00270 DEAD/DEAH box helicase BAA_5736 PF00478 IMP dehydrogenase / GMP reductase domain BAA_5737 PF01432 Peptidase family M3 BAA_5737 PF08439 Oligopeptidase F BAA_5739 PF02590 Predicted SPOUT methyltransferase BAA_5741 PF13180 PDZ domain BAA_5742 PF00753 Metallo-beta-lactamase superfamily BAA_5743 PF09648 YycH protein BAA_5744 PF07435 YycH protein BAA_5745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAA_5745 PF00512 His Kinase A (phospho-acceptor) domain BAA_5745 PF13426 PAS domain BAA_5745 PF00672 HAMP domain BAA_5746 PF00486 Transcriptional regulatory protein, C terminal BAA_5746 PF00072 Response regulator receiver domain BAA_5751 PF00709 Adenylosuccinate synthetase BAA_5752 PF00772 DnaB-like helicase N terminal domain BAA_5752 PF03796 DnaB-like helicase C terminal domain BAA_5753 PF03948 Ribosomal protein L9, C-terminal domain BAA_5753 PF01281 Ribosomal protein L9, N-terminal domain BAA_5754 PF02272 DHHA1 domain BAA_5754 PF01368 DHH family BAA_5755 PF09991 Predicted membrane protein (DUF2232) BAA_5756 PF01084 Ribosomal protein S18 BAA_5757 PF00436 Single-strand binding protein family BAA_5758 PF01250 Ribosomal protein S6 BAA_5759 PF06071 Protein of unknown function (DUF933) BAA_5759 PF01926 50S ribosome-binding GTPase BAA_5760 PF06107 Bacterial protein of unknown function (DUF951) BAA_5761 PF00924 Mechanosensitive ion channel BAA_5762 PF06866 Protein of unknown function (DUF1256) BAA_5763 PF02195 ParB-like nuclease domain BAA_5763 PF17762 HTH domain found in ParB protein BAA_5764 PF13614 AAA domain BAA_5765 PF02195 ParB-like nuclease domain BAA_5765 PF17762 HTH domain found in ParB protein BAA_5766 PF02527 rRNA small subunit methyltransferase G BAA_5767 PF01134 Glucose inhibited division protein A BAA_5767 PF13932 GidA associated domain BAA_5768 PF10396 GTP-binding protein TrmE N-terminus BAA_5768 PF01926 50S ribosome-binding GTPase BAA_5768 PF12631 MnmE helical domain BAA_5769 PF14804 Jag N-terminus BAA_5769 PF01424 R3H domain BAA_5770 PF02096 60Kd inner membrane protein BAA_5771 PF00825 Ribonuclease P BAA_5772 PF00468 Ribosomal protein L34 BAA_A0004 PF08378 Nuclease-related domain BAA_A0013 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BAA_A0035 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BAA_A0057 PF01609 Transposase DDE domain BAA_A0058 PF01609 Transposase DDE domain BAA_A0064 PF01580 FtsK/SpoIIIE family BAA_A0064 PF09397 Ftsk gamma domain BAA_A0064 PF17854 FtsK alpha domain BAA_A0064 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BAA_A0083 PF00437 Type II/IV secretion system protein BAA_A0112 PF10087 Uncharacterized protein conserved in bacteria (DUF2325) BAA_A0115 PF04235 Protein of unknown function (DUF418) BAA_A0122 PF00395 S-layer homology domain BAA_A0123 PF01569 PAP2 superfamily BAA_A0128 PF00483 Nucleotidyl transferase BAA_A0129 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BAA_A0129 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BAA_A0129 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BAA_A0144 PF03497 Anthrax toxin LF subunit BAA_A0144 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain BAA_A0150 PF02660 Glycerol-3-phosphate acyltransferase BAA_A0151 PF08279 HTH domain BAA_A0151 PF00874 PRD domain BAA_A0151 PF05043 Mga helix-turn-helix domain BAA_A0152 PF09385 Histidine kinase N terminal BAA_A0157 PF01526 Tn3 transposase DDE domain BAA_A0157 PF13700 Domain of unknown function (DUF4158) BAA_A0158 PF00239 Resolvase, N terminal domain BAA_A0158 PF02796 Helix-turn-helix domain of resolvase BAA_A0159 PF03845 Spore germination protein BAA_A0160 PF03323 Bacillus/Clostridium GerA spore germination protein BAA_A0161 PF05504 Spore germination B3/ GerAC like, C-terminal BAA_A0168 PF03495 Clostridial binary toxin B/anthrax toxin PA Ca-binding domain BAA_A0168 PF17475 Clostridial binary toxin B/anthrax toxin PA domain 2 BAA_A0168 PF17476 Clostridial binary toxin B/anthrax toxin PA domain 3 BAA_A0168 PF07691 PA14 domain BAA_A0169 PF01022 Bacterial regulatory protein, arsR family BAA_A0173 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain BAA_A0173 PF09156 Anthrax toxin lethal factor, middle domain BAA_A0180 PF18277 AbrB C-terminal domain BAA_A0180 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BAA_A0183 PF00589 Phage integrase family BAA_A0183 PF02899 Phage integrase, N-terminal SAM-like domain BAA_A0192 PF14436 Bacterial EndoU nuclease BAA_A0192 PF04740 LXG domain of WXG superfamily BAA_A0201 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment BAA_A0204 PF00589 Phage integrase family BAA_A0209 PF18801 response regulator aspartate phosphatase H, N terminal BAA_A0211 PF17209 Hfq protein BAA_A0212 PF01022 Bacterial regulatory protein, arsR family BAA_A0216 PF00565 Staphylococcal nuclease homologue BAA_A0218 PF01131 DNA topoisomerase BAA_A0218 PF01751 Toprim domain BAA_A0218 PF13342 C-terminal repeat of topoisomerase BAA_B0005 PF17632 Family of unknown function (DUF5513) BAA_B0007 PF00877 NlpC/P60 family BAA_B0017 PF04956 TrbC/VIRB2 family BAA_B0023 PF00437 Type II/IV secretion system protein BAA_B0033 PF17631 Family of unknown function (DUF5512) BAA_B0035 PF17362 Family of unknown function BAA_B0041 PF08708 Primase C terminal 1 (PriCT-1) BAA_B0043 PF13614 AAA domain BAA_B0049 PF00395 S-layer homology domain BAA_B0049 PF01520 N-acetylmuramoyl-L-alanine amidase BAA_B0054 PF01906 Putative heavy-metal-binding BAA_B0055 PF02517 CPBP intramembrane metalloprotease BAA_B0056 PF04463 Protein of unknown function (DUF523) BAA_B0057 PF00440 Bacterial regulatory proteins, tetR family BAA_B0065 PF08280 M protein trans-acting positive regulator (MGA) HTH domain BAA_B0065 PF05043 Mga helix-turn-helix domain BAA_B0069 PF09587 Bacterial capsule synthesis protein PGA_cap BAA_B0071 PF14102 Capsule biosynthesis CapC BAA_B0072 PF08245 Mur ligase middle domain BAA_B0073 PF01022 Bacterial regulatory protein, arsR family BAA_B0077 PF10502 Signal peptidase, peptidase S26 BAA_B0079 PF09385 Histidine kinase N terminal BAA_B0084 PF01810 LysE type translocator BAA_B0086 PF05043 Mga helix-turn-helix domain BAA_B0086 PF00874 PRD domain BAA_B0086 PF08280 M protein trans-acting positive regulator (MGA) HTH domain BAA_B0092 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAA_B0095 PF13152 Protein of unknown function (DUF3967) BAA_B0095 PF13411 MerR HTH family regulatory protein BAA_B0096 PF11798 IMS family HHH motif BAA_B0096 PF00817 impB/mucB/samB family BAA_B0096 PF11799 impB/mucB/samB family C-terminal domain BAA_B0100 PF17443 Uncharacterized protein pXO2-72 BAA_B0109 PF13154 Protein of unknown function (DUF3991) BAA_B0112 PF18840 Large polyvalent protein associated domain 25 BAA_B0113 PF17630 Family of unknown function (DUF5511) BAA_B0114 PF17633 Family of unknown function (DUF5514)