locus_tag	old_locus_tag	gene	Name	start	end	strand	product	note	type	ID	NCBI
BAA_0001	BAA_0001	dnaA	dnaA	307	1647	+	chromosomal replication initiator protein DnaA	identified by match to protein family HMM PF00308%3B match to protein family HMM PF08299%3B match to protein family HMM TIGR00362	gene	gene0	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0001
BAA_0002	BAA_0002	dnaN1	dnaN1	1826	2965	+	DNA polymerase III%2C beta subunit	identified by match to protein family HMM PF00712%3B match to protein family HMM PF02767%3B match to protein family HMM PF02768%3B match to protein family HMM TIGR00663	gene	gene1	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0002
BAA_0003	BAA_0003		BAA_0003	3093	3305	+	conserved hypothetical protein	identified by match to protein family HMM TIGR02988	gene	gene2	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0003
BAA_0004	BAA_0004	recF	recF	3318	4445	+	DNA replication and repair protein RecF	identified by match to protein family HMM PF02463%3B match to protein family HMM TIGR00611	gene	gene3	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0004
BAA_0005	BAA_0005	gyrB	gyrB	4484	6406	+	DNA gyrase%2C B subunit	identified by match to protein family HMM PF00204%3B match to protein family HMM PF00986%3B match to protein family HMM PF01751%3B match to protein family HMM PF02518%3B match to protein family HMM TIGR01059	gene	gene4	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0005
BAA_0006	BAA_0006	gyrA	gyrA	6495	8966	+	DNA gyrase%2C A subunit	identified by match to protein family HMM PF00521%3B match to protein family HMM PF03989%3B match to protein family HMM TIGR01063	gene	gene5	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0006
BAA_0007	BAA_0007	rrs_1	rrs_1	9233	10741	+	16S ribosomal RNA		rRNA	gene6	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0007
BAA_0008	BAA_0008		BAA_0008	10891	10969	+	tRNA-Ile		tRNA	gene7	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0008
BAA_0009	BAA_0009		BAA_0009	10976	11053	+	tRNA-Ala		tRNA	gene8	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0009
BAA_0010	BAA_0010		BAA_0010	11171	11602	-		conserved hypothetical protein%3B this region contains one or more premature stops and/or frameshifts	pseudogene	gene10	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0010
BAA_0011	BAA_0011	rrl_1	rrl_1	11147	14054	+	23S ribosomal RNA		rRNA	gene9	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0011
BAA_0012	BAA_0012	rrf_1	rrf_1	14103	14218	+	5S ribosomal RNA		rRNA	gene11	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0012
BAA_0013	BAA_0013		BAA_0013	14253	15197	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene12	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0013
BAA_0014	BAA_0014	guaB	guaB	15368	16831	+	inosine-5'-monophosphate dehydrogenase	identified by match to protein family HMM PF00478%3B match to protein family HMM PF00571%3B match to protein family HMM TIGR01302	gene	gene13	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0014
BAA_0015	BAA_0015	dacA	dacA	16936	18252	+	serine-type D-Ala-D-Ala carboxypeptidase DacA	identified by match to protein family HMM PF00768%3B match to protein family HMM PF07943	gene	gene14	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0015
BAA_0016	BAA_0016		BAA_0016	18414	19301	+	pyridoxine biosynthesis protein	identified by match to protein family HMM PF01680%3B match to protein family HMM TIGR00343	gene	gene15	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0016
BAA_0017	BAA_0017		BAA_0017	19320	19910	+	glutamine amidotransferase%2C SNO family	identified by match to protein family HMM PF01174%3B match to protein family HMM PF07685	gene	gene16	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0017
BAA_0018	BAA_0018	serS	serS	20238	21512	+	serine--tRNA ligase	identified by match to protein family HMM PF00587%3B match to protein family HMM PF02403%3B match to protein family HMM TIGR00414	gene	gene17	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0018
BAA_0019	BAA_0019		BAA_0019	21669	21761	+	tRNA-Ser		tRNA	gene18	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0019
BAA_0020	BAA_0020		BAA_0020	21928	22320	+	hypothetical protein	identified by glimmer%3B putative	gene	gene19	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0020
BAA_0021	BAA_0021		BAA_0021	22356	23024	-	deoxynucleoside kinase family protein	identified by match to protein family HMM PF01712	gene	gene20	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0021
BAA_0022	BAA_0022		BAA_0022	23027	23662	-	deoxynucleoside kinase family protein	identified by match to protein family HMM PF01712	gene	gene21	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0022
BAA_0023	BAA_0023		BAA_0023	23788	24327	-	isochorismatase family protein	identified by match to protein family HMM PF00857	gene	gene22	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0023
BAA_0024	BAA_0024		BAA_0024	24435	24935	+	cytidine/deoxycytidylate deaminase zinc-binding domain protein	identified by match to protein family HMM PF00383	gene	gene23	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0024
BAA_0025	BAA_0025	srpB	srpB	25128	25230	+	Bacterial signal recognition particle RNA		gene	gene24	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0025
BAA_0026	BAA_0026	dnaX	dnaX	25412	27100	+	DNA polymerase III%2C gamma and tau subunits	identified by match to protein family HMM PF00004%3B match to protein family HMM TIGR02397	gene	gene25	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0026
BAA_0027	BAA_0027		BAA_0027	27123	27452	+	conserved hypothetical protein TIGR00103	identified by match to protein family HMM PF02575%3B match to protein family HMM TIGR00103	gene	gene26	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0027
BAA_0028	BAA_0028	recR	recR	27467	28063	+	recombination protein RecR	identified by match to protein family HMM PF01751%3B match to protein family HMM PF02132%3B match to protein family HMM TIGR00615	gene	gene27	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0028
BAA_0029	BAA_0029		BAA_0029	28078	28299	+	conserved hypothetical protein		gene	gene28	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0029
BAA_0030	BAA_0030	bofA	bofA	28514	28783	+	sigma-k factor processing regulatory protein BofA	identified by match to protein family HMM PF07441%3B match to protein family HMM TIGR02862	gene	gene29	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0030
BAA_0031	BAA_0031	rrs_2	rrs_2	29027	30535	+	16S ribosomal RNA		rRNA	gene30	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0031
BAA_0032	BAA_0032		BAA_0032	30685	30763	+	tRNA-Ile		tRNA	gene31	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0032
BAA_0033	BAA_0033		BAA_0033	30770	30847	+	tRNA-Ala		tRNA	gene32	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0033
BAA_0034	BAA_0034		BAA_0034	30965	31396	-		conserved hypothetical protein%3B this region contains one or more premature stops and/or frameshifts	pseudogene	gene34	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0034
BAA_0035	BAA_0035	rrl_2	rrl_2	30941	33848	+	23S ribosomal RNA		rRNA	gene33	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0035
BAA_0036	BAA_0036	rrf_2	rrf_2	33897	34012	+	5S ribosomal RNA		rRNA	gene35	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0036
BAA_0037	BAA_0037		BAA_0037	34203	34382	+	putative csfB protein		gene	gene36	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0037
BAA_0038	BAA_0038		BAA_0038	34454	35875	+	Orn/Lys/Arg decarboxylase family protein	identified by match to protein family HMM PF01276%3B match to protein family HMM PF03711	gene	gene37	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0038
BAA_0039	BAA_0039	tmk	tmk	35877	36503	+	dTMP kinase	identified by match to protein family HMM PF02223%3B match to protein family HMM TIGR00041	gene	gene38	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0039
BAA_0040	BAA_0040	holB	holB	36539	37522	+	DNA polymerase III%2C delta prime subunit	identified by match to protein family HMM TIGR00678	gene	gene39	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0040
BAA_0041	BAA_0041		BAA_0041	37528	38355	+	conserved hypothetical protein	identified by match to protein family HMM PF04468	gene	gene40	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0041
BAA_0042	BAA_0042		BAA_0042	38370	38720	+	conserved hypothetical protein	identified by match to protein family HMM PF06156	gene	gene41	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0042
BAA_0043	BAA_0043		BAA_0043	38841	39581	+	conserved hypothetical protein		gene	gene42	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0043
BAA_0044	BAA_0044		BAA_0044	39568	39858	+	conserved hypothetical protein	identified by match to protein family HMM PF01541	gene	gene43	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0044
BAA_0045	BAA_0045		BAA_0045	39827	40702	+	tetrapyrrole methylase family protein	identified by match to protein family HMM PF00590%3B match to protein family HMM TIGR00096	gene	gene44	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0045
BAA_0046	BAA_0046	abrB	abrB	40723	41007	-	transition state transcriptional regulatory protein AbrB	identified by match to protein family HMM PF04014%3B match to protein family HMM TIGR01439	gene	gene45	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0046
BAA_0047	BAA_0047	metS	metS	41498	43480	+	methionine--tRNA ligase	identified by match to protein family HMM PF00133%3B match to protein family HMM PF01588%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00398%3B match to protein family HMM TIGR00399	gene	gene46	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0047
BAA_0048	BAA_0048		BAA_0048	43646	44413	+	deoxyribonuclease%2C TatD family	identified by match to protein family HMM PF01026%3B match to protein family HMM TIGR00010	gene	gene47	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0048
BAA_0049	BAA_0049		BAA_0049	44628	45185	+	primase-related protein	identified by match to protein family HMM PF01751%3B match to protein family HMM TIGR00334	gene	gene48	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0049
BAA_0050	BAA_0050	ksgA	ksgA	45182	46060	+	dimethyladenosine transferase	identified by match to protein family HMM PF00398%3B match to protein family HMM TIGR00755	gene	gene49	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0050
BAA_0051	BAA_0051		BAA_0051	46171	47034	+	yabG protein	identified by match to protein family HMM PF05582%3B match to protein family HMM TIGR02855	gene	gene50	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0051
BAA_0052	BAA_0052		BAA_0052	47273	47533	+	veg protein	identified by match to protein family HMM PF06257	gene	gene51	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0052
BAA_0053	BAA_0053	sspF	sspF	47625	47804	+	small%2C acid-soluble spore protein		gene	gene52	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0053
BAA_0054	BAA_0054	ispE	ispE	48001	48870	+	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	identified by match to protein family HMM PF00288%3B match to protein family HMM PF08544%3B match to protein family HMM TIGR00154	gene	gene53	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0054
BAA_0055	BAA_0055	purR	purR	48925	49773	+	pur operon repressor	identified by match to protein family HMM PF00156%3B match to protein family HMM PF09182%3B match to protein family HMM TIGR01743	gene	gene54	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0055
BAA_0056	BAA_0056		BAA_0056	49760	49879	+	hypothetical protein	identified by glimmer%3B putative	gene	gene55	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0056
BAA_0057	BAA_0057		BAA_0057	49896	50270	+	putative endoribonuclease L-PSP	identified by match to protein family HMM PF01042%3B match to protein family HMM TIGR00004	gene	gene56	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0057
BAA_0058	BAA_0058	spoVG	spoVG	50423	50716	+	stage V sporulation protein G	identified by match to protein family HMM PF04026	gene	gene57	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0058
BAA_0059	BAA_0059	glmU	glmU	51039	52418	+	UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase	identified by match to protein family HMM PF00132%3B match to protein family HMM PF00483%3B match to protein family HMM TIGR01173	gene	gene58	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0059
BAA_0060	BAA_0060	prsA	prsA	52437	53390	+	ribose-phosphate pyrophosphokinase	identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01251	gene	gene59	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0060
BAA_0061	BAA_0061	spoVC	spoVC	53400	54023	+	aminoacyl-tRNA hydrolase	identified by match to protein family HMM PF01195%3B match to protein family HMM TIGR00447	gene	gene60	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0061
BAA_0062	BAA_0062		BAA_0062	54094	54318	+	conserved hypothetical protein		gene	gene61	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0062
BAA_0063	BAA_0063	mfd	mfd	54424	57954	+	transcription-repair coupling factor	identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF02559%3B match to protein family HMM PF03461%3B match to protein family HMM PF04851%3B match to protein family HMM TIGR00580	gene	gene62	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0063
BAA_0064	BAA_0064	spoVT	spoVT	58090	58626	+	stage V sporulation protein T	identified by match to protein family HMM PF04014%3B match to protein family HMM TIGR01439%3B match to protein family HMM TIGR02851	gene	gene63	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0064
BAA_0065	BAA_0065		BAA_0065	58857	60458	+	polysaccharide synthase family protein	identified by match to protein family HMM PF01554%3B match to protein family HMM PF01943%3B match to protein family HMM PF03023	gene	gene64	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0065
BAA_0066	BAA_0066		BAA_0066	60471	61931	+	tetrapyrrole methylase family protein/MazG family protein	identified by match to protein family HMM PF00590%3B match to protein family HMM PF03819%3B match to protein family HMM TIGR00444	gene	gene65	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0066
BAA_0067	BAA_0067		BAA_0067	61946	62221	+	S4 domain protein	identified by match to protein family HMM PF01479	gene	gene66	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0067
BAA_0068	BAA_0068	yabP	yabP	62280	62588	+	sporulation protein YabP	identified by match to protein family HMM PF07873%3B match to protein family HMM TIGR02892	gene	gene67	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0068
BAA_0069	BAA_0069	yabQ	yabQ	62585	63238	+	spore cortex biosynthesis protein YabQ	identified by match to protein family HMM PF09578%3B match to protein family HMM TIGR02893	gene	gene68	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0069
BAA_0070	BAA_0070	divIC1	divIC1	63235	63594	+	cell division protein DivIC	identified by match to protein family HMM PF04977	gene	gene69	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0070
BAA_0071	BAA_0071		BAA_0071	63682	64164	+	S1 RNA binding domain protein	identified by match to protein family HMM PF00575	gene	gene70	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0071
BAA_0072	BAA_0072		BAA_0072	64324	64402	+	tRNA-Met		tRNA	gene71	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0072
BAA_0073	BAA_0073		BAA_0073	64412	64486	+	tRNA-Glu		tRNA	gene72	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0073
BAA_0074	BAA_0074	spoIIE	spoIIE	64743	67214	+	stage II sporulation protein E	identified by match to protein family HMM PF07228%3B match to protein family HMM TIGR02865	gene	gene73	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0074
BAA_0075	BAA_0075	tilS	tilS	67448	68878	+	tRNA(Ile)-lysidine synthetase	identified by match to protein family HMM PF01171%3B match to protein family HMM PF06508%3B match to protein family HMM TIGR02432%3B match to protein family HMM TIGR02433	gene	gene74	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0075
BAA_0076	BAA_0076	hpt	hpt	68875	69417	+	hypoxanthine phosphoribosyltransferase	identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01203	gene	gene75	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0076
BAA_0077	BAA_0077	ftsH	ftsH	69503	71404	+	cell division protein FtsH	identified by match to protein family HMM PF00004%3B match to protein family HMM PF01434%3B match to protein family HMM PF06480%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR01241	gene	gene76	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0077
BAA_0078	BAA_0078	coaX	coaX	71629	72417	+	pantothenate kinase%2C type III	identified by match to protein family HMM PF03309%3B match to protein family HMM TIGR00671	gene	gene77	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0078
BAA_0079	BAA_0079	hslO	hslO	72424	73299	+	chaperonin%2C 33 kDa	identified by match to protein family HMM PF01430	gene	gene78	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0079
BAA_0080	BAA_0080	cysK1	cysK1	73404	74327	+	cysteine synthase A	identified by match to protein family HMM PF00291%3B match to protein family HMM TIGR01136%3B match to protein family HMM TIGR01139	gene	gene79	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0080
BAA_0081	BAA_0081	pabB	pabB	74548	75945	+	para-aminobenzoate synthase%2C component I	identified by match to protein family HMM PF00425%3B match to protein family HMM PF04715	gene	gene80	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0081
BAA_0082	BAA_0082	pabA	pabA	75951	76538	+	para-aminobenzoate synthase%2C glutamine amidotransferase component	identified by match to protein family HMM PF00117%3B match to protein family HMM TIGR00566	gene	gene81	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0082
BAA_0083	BAA_0083	pabC	pabC	76532	77404	+	4-amino-4-deoxychorismate lyase PabC	identified by match to protein family HMM PF01063	gene	gene82	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0083
BAA_0084	BAA_0084	folP	folP	77406	78239	+	dihydropteroate synthase	identified by match to protein family HMM PF00809%3B match to protein family HMM TIGR01496	gene	gene83	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0084
BAA_0085	BAA_0085	folB	folB	78240	78602	+	dihydroneopterin aldolase	identified by match to protein family HMM PF02152%3B match to protein family HMM TIGR00525%3B match to protein family HMM TIGR00526	gene	gene84	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0085
BAA_0086	BAA_0086	folK	folK	78599	79114	+	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase	identified by match to protein family HMM PF01288%3B match to protein family HMM TIGR01498	gene	gene85	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0086
BAA_0087	BAA_0087		BAA_0087	79066	79269	+	DNA-binding protein	identified by match to protein family HMM PF01381	gene	gene86	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0087
BAA_0088	BAA_0088		BAA_0088	79293	80291	+	putative TIM-barrel protein%2C NifR3 family	identified by match to protein family HMM PF01180%3B match to protein family HMM PF01207%3B match to protein family HMM TIGR00737	gene	gene87	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0088
BAA_0089	BAA_0089	lysS	lysS	80451	81950	+	lysine--tRNA ligase	identified by match to protein family HMM PF00152%3B match to protein family HMM PF01336%3B match to protein family HMM TIGR00499	gene	gene88	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0089
BAA_0090	BAA_0090	rrs_3	rrs_3	82349	83857	+	16S ribosomal RNA		rRNA	gene89	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0090
BAA_0091	BAA_0091		BAA_0091	84060	84491	-		conserved hypothetical protein%3B this region contains one or more premature stops and/or frameshifts	pseudogene	gene91	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0091
BAA_0092	BAA_0092	rrl_3	rrl_3	84036	86943	+	23S ribosomal RNA		rRNA	gene90	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0092
BAA_0093	BAA_0093	rrf_3	rrf_3	86993	87108	+	5S ribosomal RNA		rRNA	gene92	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0093
BAA_0094	BAA_0094	ctsR	ctsR	87315	87776	+	transcriptional regulator CtsR	identified by match to protein family HMM PF05848	gene	gene93	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0094
BAA_0095	BAA_0095		BAA_0095	87950	88498	+	conserved hypothetical protein	identified by match to protein family HMM PF02151	gene	gene94	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0095
BAA_0096	BAA_0096		BAA_0096	88503	89567	+	phosphotransferase domain protein	identified by match to protein family HMM PF00217	gene	gene95	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0096
BAA_0097	BAA_0097		BAA_0097	89590	92025	+	negative regulator of genetic competence ClpC/MecB	identified by match to protein family HMM PF00004%3B match to protein family HMM PF02151%3B match to protein family HMM PF02861%3B match to protein family HMM PF07724%3B match to protein family HMM PF07728	gene	gene96	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0097
BAA_0098	BAA_0098	radA	radA	92122	93498	+	DNA repair protein RadA	identified by match to protein family HMM TIGR00416	gene	gene97	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0098
BAA_0099	BAA_0099		BAA_0099	93502	94575	+	putative DNA-binding protein	identified by match to protein family HMM PF00633%3B match to protein family HMM PF02457	gene	gene98	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0099
BAA_0100	BAA_0100		BAA_0100	94736	95845	+	conserved hypothetical protein	identified by match to protein family HMM PF01850%3B match to protein family HMM PF01938	gene	gene99	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0100
BAA_0101	BAA_0101	ispD	ispD	95862	96542	+	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	identified by match to protein family HMM PF01128%3B match to protein family HMM TIGR00453	gene	gene100	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0101
BAA_0102	BAA_0102	ispF	ispF	96657	97133	+	2C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase	identified by match to protein family HMM PF02542%3B match to protein family HMM TIGR00151	gene	gene101	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0102
BAA_0103	BAA_0103	gltX	gltX	97205	98680	+	glutamate--tRNA ligase	identified by match to protein family HMM PF00749%3B match to protein family HMM TIGR00464	gene	gene102	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0103
BAA_0104	BAA_0104	cysE	cysE	99113	99778	+	serine O-acetyltransferase	identified by match to protein family HMM PF00132%3B match to protein family HMM TIGR01172	gene	gene103	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0104
BAA_0105	BAA_0105	cysS	cysS	99759	101156	+	cysteine--tRNA ligase	identified by match to protein family HMM PF01406%3B match to protein family HMM PF09190%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00435	gene	gene104	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0105
BAA_0106	BAA_0106		BAA_0106	101159	101566	+	conserved hypothetical protein	identified by match to protein family HMM PF00636	gene	gene105	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0106
BAA_0107	BAA_0107		BAA_0107	101563	102306	+	RNA methyltransferase%2C TrmH family%2C group 3	identified by match to protein family HMM PF00588%3B match to protein family HMM PF08032%3B match to protein family HMM TIGR00186	gene	gene106	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0107
BAA_0108	BAA_0108		BAA_0108	102310	102822	+	conserved hypothetical protein	identified by match to protein family HMM PF05991	gene	gene107	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0108
BAA_0109	BAA_0109	sigH	sigH	102890	103546	+	RNA polymerase sigma-30 factor	identified by match to protein family HMM PF04542%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02859%3B match to protein family HMM TIGR02937	gene	gene108	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0109
BAA_0110	BAA_0110	secE	secE	103857	104036	+	preprotein translocase%2C SecE subunit	identified by match to protein family HMM PF00584%3B match to protein family HMM TIGR00964	gene	gene109	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0110
BAA_0111	BAA_0111	nusG	nusG	104168	104701	+	transcription termination/antitermination factor NusG	identified by match to protein family HMM PF02357%3B match to protein family HMM TIGR00922	gene	gene110	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0111
BAA_0112	BAA_0112	rplK	rplK	104869	105294	+	50S ribosomal protein L11	identified by match to protein family HMM PF00298%3B match to protein family HMM PF03946%3B match to protein family HMM TIGR01632	gene	gene111	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0112
BAA_0113	BAA_0113	rplA	rplA	105472	106164	+	50S ribosomal protein L1	identified by match to protein family HMM PF00687%3B match to protein family HMM TIGR01169	gene	gene112	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0113
BAA_0115	BAA_0115	rplJ	rplJ	106397	106897	+	50S ribosomal protein L10	identified by match to protein family HMM PF00466	gene	gene113	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0115
BAA_0116	BAA_0116	rplL	rplL	106965	107324	+	50S ribosomal protein L7/L12	identified by match to protein family HMM PF00542%3B match to protein family HMM TIGR00855	gene	gene114	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0116
BAA_0117	BAA_0117		BAA_0117	107399	107998	+	ybxB protein	identified by match to protein family HMM PF05175%3B match to protein family HMM PF08242	gene	gene115	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0117
BAA_0118	BAA_0118	rpoB	rpoB	108291	111824	+	DNA-directed RNA polymerase%2C beta subunit	identified by match to protein family HMM PF00562%3B match to protein family HMM PF04560%3B match to protein family HMM PF04561%3B match to protein family HMM PF04563%3B match to protein family HMM PF04565%3B match to protein family HMM TIGR02013	gene	gene116	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0118
BAA_0119	BAA_0119	rpoC	rpoC	111862	115473	+	DNA-directed RNA polymerase%2C beta' subunit	identified by match to protein family HMM PF00623%3B match to protein family HMM PF04983%3B match to protein family HMM PF04997%3B match to protein family HMM PF04998%3B match to protein family HMM PF05000%3B match to protein family HMM TIGR02386	gene	gene117	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0119
BAA_0120	BAA_0120		BAA_0120	115587	115835	+	ribosomal protein L7A family	identified by match to protein family HMM PF01248	gene	gene118	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0120
BAA_0121	BAA_0121	rpsL	rpsL	115950	116372	+	30S ribosomal protein S12	identified by match to protein family HMM PF00164%3B match to protein family HMM TIGR00981	gene	gene119	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0121
BAA_0122	BAA_0122	rpsG	rpsG	116402	116872	+	30S ribosomal protein S7	identified by match to protein family HMM PF00177%3B match to protein family HMM TIGR01029	gene	gene120	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0122
BAA_0123	BAA_0123	fusA	fusA	117080	119158	+	translation elongation factor G	identified by match to protein family HMM PF00009%3B match to protein family HMM PF00679%3B match to protein family HMM PF03144%3B match to protein family HMM PF03764%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00484	gene	gene121	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0123
BAA_0124	BAA_0124	tuf	tuf	119276	120463	+	translation elongation factor Tu	identified by match to protein family HMM PF00009%3B match to protein family HMM PF03143%3B match to protein family HMM PF03144%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00485	gene	gene122	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0124
BAA_0125	BAA_0125	rpsJ	rpsJ	120862	121170	+	30S ribosomal protein S10	identified by match to protein family HMM PF00338%3B match to protein family HMM TIGR01049	gene	gene123	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0125
BAA_0126	BAA_0126	rplC	rplC	121205	121837	+	50S ribosomal protein L3	identified by match to protein family HMM PF00297%3B match to protein family HMM TIGR03625	gene	gene124	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0126
BAA_0127	BAA_0127	rplD	rplD	121863	122486	+	50S ribosomal protein L4	identified by match to protein family HMM PF00573	gene	gene125	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0127
BAA_0128	BAA_0128	rplW	rplW	122486	122776	+	50S ribosomal protein L23	identified by match to protein family HMM PF00276	gene	gene126	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0128
BAA_0129	BAA_0129	rplB	rplB	122805	123635	+	50S ribosomal protein L2	identified by match to protein family HMM PF00181%3B match to protein family HMM PF03947%3B match to protein family HMM TIGR01171	gene	gene127	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0129
BAA_0130	BAA_0130	rpsS	rpsS	123696	123974	+	30S ribosomal protein S19	identified by match to protein family HMM PF00203%3B match to protein family HMM TIGR01050	gene	gene128	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0130
BAA_0131	BAA_0131	rplV	rplV	123992	124333	+	50S ribosomal protein L22	identified by match to protein family HMM PF00237%3B match to protein family HMM TIGR01044	gene	gene129	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0131
BAA_0132	BAA_0132	rpsC	rpsC	124337	124996	+	30S ribosomal protein S3	identified by match to protein family HMM PF00189%3B match to protein family HMM PF00417%3B match to protein family HMM PF07650%3B match to protein family HMM TIGR01009	gene	gene130	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0132
BAA_0133	BAA_0133	rplP	rplP	124998	125432	+	50S ribosomal protein L16	identified by match to protein family HMM PF00252%3B match to protein family HMM TIGR01164	gene	gene131	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0133
BAA_0134	BAA_0134	rpmC	rpmC	125422	125622	+	50S ribosomal protein L29	identified by match to protein family HMM PF00831%3B match to protein family HMM TIGR00012	gene	gene132	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0134
BAA_0135	BAA_0135	rpsQ	rpsQ	125643	125906	+	30S ribosomal protein S17	identified by match to protein family HMM PF00366%3B match to protein family HMM TIGR03635	gene	gene133	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0135
BAA_0136	BAA_0136	rplN	rplN	125950	126318	+	50S ribosomal protein L14	identified by match to protein family HMM PF00238%3B match to protein family HMM TIGR01067	gene	gene134	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0136
BAA_0137	BAA_0137	rplX	rplX	126357	126668	+	50S ribosomal protein L24	identified by match to protein family HMM PF00467%3B match to protein family HMM TIGR01079	gene	gene135	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0137
BAA_0138	BAA_0138	rplE	rplE	126695	127234	+	50S ribosomal protein L5	identified by match to protein family HMM PF00281%3B match to protein family HMM PF00673	gene	gene136	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0138
BAA_0139	BAA_0139	rpsN	rpsN	127268	127453	+	30S ribosomal protein S14	identified by match to protein family HMM PF00253	gene	gene137	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0139
BAA_0140	BAA_0140	rpsH	rpsH	127483	127881	+	30S ribosomal protein S8	identified by match to protein family HMM PF00410	gene	gene138	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0140
BAA_0141	BAA_0141	rplF	rplF	127914	128453	+	50S ribosomal protein L6	identified by match to protein family HMM PF00347%3B match to protein family HMM TIGR03654	gene	gene139	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0141
BAA_0142	BAA_0142	rplR	rplR	128485	128847	+	50S ribosomal protein L18	identified by match to protein family HMM PF00861%3B match to protein family HMM TIGR00060	gene	gene140	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0142
BAA_0143	BAA_0143	rpsE	rpsE	128869	129369	+	30S ribosomal protein S5	identified by match to protein family HMM PF00333%3B match to protein family HMM PF03719%3B match to protein family HMM TIGR01021	gene	gene141	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0143
BAA_0144	BAA_0144	rpmD	rpmD	129383	129565	+	50S ribosomal protein L30	identified by match to protein family HMM PF00327%3B match to protein family HMM TIGR01308	gene	gene142	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0144
BAA_0145	BAA_0145	rplO	rplO	129599	130039	+	50S ribosomal protein L15	identified by match to protein family HMM PF00256%3B match to protein family HMM PF01305%3B match to protein family HMM TIGR01071	gene	gene143	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0145
BAA_0146	BAA_0146	secY1	secY1	130039	131340	+	preprotein translocase%2C SecY subunit	identified by match to protein family HMM PF00344%3B match to protein family HMM TIGR00967	gene	gene144	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0146
BAA_0147	BAA_0147	adk	adk	131397	132047	+	adenylate kinase	identified by match to protein family HMM PF00406%3B match to protein family HMM PF05191%3B match to protein family HMM TIGR01351	gene	gene145	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0147
BAA_0148	BAA_0148	maP1	maP1	132047	132793	+	methionine aminopeptidase%2C type I	identified by match to protein family HMM PF00557%3B match to protein family HMM TIGR00500	gene	gene146	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0148
BAA_0149	BAA_0149	infA	infA	132862	133080	+	translation initiation factor IF-1	identified by match to protein family HMM PF00575%3B match to protein family HMM PF01176%3B match to protein family HMM TIGR00008	gene	gene147	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0149
BAA_0150	BAA_0150	rpmJ	rpmJ	133116	133229	+	50S ribosomal protein L36	identified by match to protein family HMM PF00444%3B match to protein family HMM TIGR01022	gene	gene148	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0150
BAA_0151	BAA_0151	rpsM	rpsM	133251	133616	+	30S ribosomal protein S13	identified by match to protein family HMM PF00416%3B match to protein family HMM TIGR03631	gene	gene149	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0151
BAA_0152	BAA_0152	rpsK	rpsK	133641	134030	+	30S ribosomal protein S11	identified by match to protein family HMM PF00411%3B match to protein family HMM TIGR03632	gene	gene150	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0152
BAA_0153	BAA_0153	rpoA	rpoA	134211	135155	+	DNA-directed RNA polymerase%2C alpha subunit	identified by match to protein family HMM PF01000%3B match to protein family HMM PF01193%3B match to protein family HMM PF03118%3B match to protein family HMM TIGR02027	gene	gene151	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0153
BAA_0154	BAA_0154	rplQ	rplQ	135191	135553	+	50S ribosomal protein L17	identified by match to protein family HMM PF01196%3B match to protein family HMM TIGR00059	gene	gene152	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0154
BAA_0155	BAA_0155		BAA_0155	135657	136499	+	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene153	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0155
BAA_0156	BAA_0156		BAA_0156	136475	137356	+	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene154	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0156
BAA_0157	BAA_0157		BAA_0157	137344	138138	+	cobalt transport protein	identified by match to protein family HMM PF02361	gene	gene155	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0157
BAA_0158	BAA_0158	truA1	truA1	138138	138896	+	tRNA pseudouridine synthase A	identified by match to protein family HMM PF01416%3B match to protein family HMM TIGR00071	gene	gene156	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0158
BAA_0160	BAA_0160	rplM	rplM	139049	139486	+	50S ribosomal protein L13	identified by match to protein family HMM PF00572%3B match to protein family HMM TIGR01066	gene	gene157	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0160
BAA_0161	BAA_0161	rpsI	rpsI	139508	139900	+	30S ribosomal protein S9	identified by match to protein family HMM PF00380	gene	gene158	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0161
BAA_0162	BAA_0162		BAA_0162	140063	140491	+	conserved hypothetical protein		gene	gene159	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0162
BAA_0163	BAA_0163	cwlD	cwlD	140558	141271	+	N-acetylmuramoyl-L-alanine amidase CwlD	identified by match to protein family HMM PF01520%3B match to protein family HMM TIGR02883	gene	gene160	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0163
BAA_0164	BAA_0164		BAA_0164	141416	142480	+	mrp protein	identified by match to protein family HMM PF01883	gene	gene161	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0164
BAA_0165	BAA_0165	gerD	gerD	142537	143154	-	spore germination protein GerD		gene	gene162	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0165
BAA_0166	BAA_0166	kbaA	kbaA	143294	143905	+	kinb signaling pathway activation protein		gene	gene163	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0166
BAA_0167	BAA_0167		BAA_0167	144010	144774	-	putative polysaccharide deacetylase	identified by match to protein family HMM PF01522%3B match to protein family HMM TIGR02764	gene	gene164	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0167
BAA_0168	BAA_0168		BAA_0168	144945	145163	+	conserved hypothetical protein		gene	gene165	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0168
BAA_0169	BAA_0169	rrs_4	rrs_4	145413	146921	+	16S ribosomal RNA		rRNA	gene166	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0169
BAA_0170	BAA_0170		BAA_0170	147124	147555	-		conserved hypothetical protein%3B this region contains one or more premature stops and/or frameshifts	pseudogene	gene168	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0170
BAA_0171	BAA_0171	rrl_4	rrl_4	147100	150007	+	23S ribosomal RNA		rRNA	gene167	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0171
BAA_0172	BAA_0172	rrf_4	rrf_4	150094	150209	+	5S ribosomal RNA		rRNA	gene169	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0172
BAA_0173	BAA_0173		BAA_0173	150218	150294	+	tRNA-Asn		tRNA	gene170	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0173
BAA_0174	BAA_0174		BAA_0174	150298	150373	+	tRNA-Thr		tRNA	gene171	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0174
BAA_0175	BAA_0175		BAA_0175	150394	150470	+	tRNA-Glu		tRNA	gene172	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0175
BAA_0176	BAA_0176		BAA_0176	150474	150551	+	tRNA-Val		tRNA	gene173	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0176
BAA_0177	BAA_0177		BAA_0177	150568	150651	+	tRNA-Tyr		tRNA	gene174	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0177
BAA_0178	BAA_0178		BAA_0178	150717	150791	+	tRNA-Gln		tRNA	gene175	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0178
BAA_0179	BAA_0179		BAA_0179	150797	150872	+	tRNA-Lys		tRNA	gene176	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0179
BAA_0180	BAA_0180		BAA_0180	150878	150952	+	tRNA-Gly		tRNA	gene177	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0180
BAA_0181	BAA_0181		BAA_0181	150960	151035	+	tRNA-Ala		tRNA	gene178	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0181
BAA_0182	BAA_0182		BAA_0182	151147	151356	+		glycerate kinase%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene179	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0182
BAA_0183	BAA_0183		BAA_0183	151307	152293	+		glycerate kinase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02595%3B match to protein family HMM TIGR00045	pseudogene	gene180	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0183
BAA_0184	BAA_0184	rocF	rocF	152503	153396	+	arginase	identified by match to protein family HMM PF00491%3B match to protein family HMM TIGR01229	gene	gene181	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0184
BAA_0185	BAA_0185		BAA_0185	153645	154466	+	conserved hypothetical protein TIGR00159	identified by match to protein family HMM PF02457%3B match to protein family HMM TIGR00159	gene	gene182	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0185
BAA_0186	BAA_0186		BAA_0186	154459	155949	+	conserved hypothetical protein	identified by match to protein family HMM PF07949	gene	gene183	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0186
BAA_0187	BAA_0187	glmM	glmM	155942	157288	+	phosphoglucosamine mutase	identified by match to protein family HMM PF00408%3B match to protein family HMM PF02878%3B match to protein family HMM PF02879%3B match to protein family HMM PF02880%3B match to protein family HMM TIGR01455	gene	gene184	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0187
BAA_0188	BAA_0188		BAA_0188	157427	157582	+			gene	gene185	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0188
BAA_0189	BAA_0189	glmS	glmS	157774	159576	+	glutamine--fructose-6-phosphate transaminase (isomerizing)	identified by match to protein family HMM PF00310%3B match to protein family HMM PF01380%3B match to protein family HMM TIGR01135	gene	gene186	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0189
BAA_0190	BAA_0190		BAA_0190	159940	160749	+	conserved hypothetical protein	identified by match to protein family HMM PF00561	gene	gene187	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0190
BAA_0191	BAA_0191	gntR	gntR	161156	161887	+	gluconate operon transcriptional repressor	identified by match to protein family HMM PF00392%3B match to protein family HMM PF07729	gene	gene188	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0191
BAA_0192	BAA_0192		BAA_0192	161880	162410	+		gluconokinase%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF00370	pseudogene	gene189	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0192
BAA_0193	BAA_0193		BAA_0193	162414	163415	+		gluconokinase (Gluconate kinase)%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF02782	pseudogene	gene190	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0193
BAA_0194	BAA_0194	gntP1	gntP1	163535	164881	+	gluconate permease	identified by match to protein family HMM PF02447%3B match to protein family HMM PF03600%3B match to protein family HMM TIGR00791	gene	gene191	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0194
BAA_0195	BAA_0195	yqjI	yqjI	165146	166555	+	6-phosphogluconate dehydrogenase%2C decarboxylating	identified by match to protein family HMM PF00393%3B match to protein family HMM PF03446%3B match to protein family HMM TIGR00873	gene	gene192	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0195
BAA_0196	BAA_0196		BAA_0196	166898	168862	+	putative prolyl oligopeptidase family protein	identified by match to protein family HMM PF00326%3B match to protein family HMM PF07676	gene	gene193	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0196
BAA_0197	BAA_0197		BAA_0197	168981	169547	+	conserved hypothetical protein		gene	gene194	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0197
BAA_0198	BAA_0198		BAA_0198	169619	170125	-	conserved hypothetical protein	identified by match to protein family HMM PF04173%3B match to protein family HMM PF07681	gene	gene195	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0198
BAA_0199	BAA_0199		BAA_0199	170366	171280	-	conserved hypothetical protein		gene	gene196	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0199
BAA_0200	BAA_0200		BAA_0200	171280	171771	-	RNA polymerase sigma-70 factor%2C ECF subfamily	identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937	gene	gene197	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0200
BAA_0201	BAA_0201		BAA_0201	171912	172874	-		putative lipoprotein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene198	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0201
BAA_0202	BAA_0202		BAA_0202	172871	173212	-		group-specific protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene199	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0202
BAA_0203	BAA_0203		BAA_0203	173625	173753	+		oxidoreductase%2C short chain dehydrogenase/reductase family%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene200	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0203
BAA_0204	BAA_0204		BAA_0204	173793	174428	+		oxidoreductase%2C short-chain dehydrogenase/reductase family%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF00106	pseudogene	gene201	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0204
BAA_0205	BAA_0205		BAA_0205	174466	175134	-	ABC transporter%2C permease protein	identified by match to protein family HMM PF00528	gene	gene202	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0205
BAA_0206	BAA_0206		BAA_0206	175109	176149	-	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005%3B match to protein family HMM PF09383	gene	gene203	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0206
BAA_0207	BAA_0207		BAA_0207	176162	176974	-	putative ABC transporter%2C substrate-binding protein	identified by match to protein family HMM PF03180	gene	gene204	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0207
BAA_0209	BAA_0209		BAA_0209	177254	178162	-	oxidoreductase%2C zinc-binding dehydrogenase family	identified by match to protein family HMM PF00107%3B match to protein family HMM PF08240	gene	gene205	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0209
BAA_0210	BAA_0210		BAA_0210	178308	179072	+	putative lipoprotein		gene	gene206	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0210
BAA_0211	BAA_0211		BAA_0211	179184	180620	+	oxidoreductase%2C FAD-binding	identified by match to protein family HMM PF01565	gene	gene207	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0211
BAA_0212	BAA_0212		BAA_0212	180617	181150	+	conserved hypothetical protein		gene	gene208	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0212
BAA_0213	BAA_0213		BAA_0213	181229	182950	+	conserved domain protein		gene	gene209	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0213
BAA_0214	BAA_0214		BAA_0214	183132	184328	+	drug resistance transporter%2C Bcr/CflA family	identified by match to protein family HMM PF07690%3B match to protein family HMM TIGR00710	gene	gene210	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0214
BAA_0215	BAA_0215		BAA_0215	184579	185079	+	putative lipoprotein		gene	gene211	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0215
BAA_0216	BAA_0216		BAA_0216	185096	185311	-	hypothetical protein	identified by glimmer%3B putative	gene	gene212	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0216
BAA_0218	BAA_0218		BAA_0218	185720	186643	+	oligopeptide ABC transporter%2C permease protein	identified by match to protein family HMM PF00528	gene	gene213	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0218
BAA_0219	BAA_0219		BAA_0219	186660	187664	+	oligopeptide ABC transporter%2C permease protein	identified by match to protein family HMM PF00528	gene	gene214	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0219
BAA_0220	BAA_0220		BAA_0220	187621	188631	+	oligopeptide ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727	gene	gene215	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0220
BAA_0221	BAA_0221		BAA_0221	188628	189401	+	oligopeptide ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene216	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0221
BAA_0222	BAA_0222		BAA_0222	189415	191025	+	oligopeptide ABC transporter%2C oligopeptide-binding protein	identified by match to protein family HMM PF00496	gene	gene217	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0222
BAA_0223	BAA_0223		BAA_0223	191042	191509	-	putative lipoprotein		gene	gene218	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0223
BAA_0224	BAA_0224		BAA_0224	191681	192580	+	transcriptional regulator%2C AraC family	identified by match to protein family HMM PF00165	gene	gene219	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0224
BAA_0225	BAA_0225		BAA_0225	192653	192790	+	putative lipoprotein		gene	gene220	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0225
BAA_0226	BAA_0226		BAA_0226	192923	193135	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene221	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0226
BAA_0227	BAA_0227		BAA_0227	193180	194820	-	putative oligopeptide ABC transporter%2C oligopeptide-binding protein	identified by match to protein family HMM PF00496	gene	gene222	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0227
BAA_0228	BAA_0228		BAA_0228	195208	196848	-	putative oligopeptide ABC transporter%2C oligopeptide-binding protein	identified by match to protein family HMM PF00496	gene	gene223	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0228
BAA_0230	BAA_0230		BAA_0230	197240	198073	-	oxidoreductase%2C aldo/keto reductase family	identified by match to protein family HMM PF00248	gene	gene224	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0230
BAA_0231	BAA_0231		BAA_0231	198141	198878	-		pyrroline-5-carboxylate reductase%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF01210%3B match to protein family HMM PF03807	pseudogene	gene225	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0231
BAA_0232	BAA_0232		BAA_0232	199066	199716	+	nucleoside transporter%2C PnuC family	identified by match to protein family HMM PF04973%3B match to protein family HMM TIGR01528	gene	gene226	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0232
BAA_0233	BAA_0233		BAA_0233	199784	200635	-	putative transporter	identified by match to protein family HMM PF06800	gene	gene227	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0233
BAA_0234	BAA_0234	modB	modB	200922	201611	-	molybdenum ABC transporter%2C permease protein	identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR02141	gene	gene228	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0234
BAA_0235	BAA_0235	modA_1	modA_1	201617	201862	-		molybdenum ABC transporter%2C molybdenum-binding protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene229	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0235
BAA_0236	BAA_0236	modA_2	modA_2	201856	202422	-		molybdate ABC transporter%2C periplasmic molybdate-binding protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM TIGR01256	pseudogene	gene230	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0236
BAA_0237	BAA_0237		BAA_0237	202584	203504	+	putative molybdopterin biosynthesis protein	identified by match to protein family HMM PF05930%3B match to protein family HMM TIGR01764	gene	gene231	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0237
BAA_0238	BAA_0238		BAA_0238	204077	204943	-	transcriptional regulator%2C LysR family	identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466	gene	gene232	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0238
BAA_0239	BAA_0239		BAA_0239	205086	206039	+	transporter%2C EamA family	identified by match to protein family HMM PF00892	gene	gene233	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0239
BAA_0240	BAA_0240		BAA_0240	206061	206201	+	hypothetical protein	identified by glimmer%3B putative	gene	gene234	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0240
BAA_0241	BAA_0241		BAA_0241	206569	207174	+	putative 1-acyl-sn-glycerol-3-phosphate acyltransferase	identified by match to protein family HMM PF01553%3B match to protein family HMM TIGR00530	gene	gene235	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0241
BAA_0242	BAA_0242		BAA_0242	207333	207461	+		conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene236	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0242
BAA_0243	BAA_0243		BAA_0243	207649	208626	+	sugar-binding transcriptional regulator%2C LacI family	identified by match to protein family HMM PF00356%3B match to protein family HMM PF00532	gene	gene237	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0243
BAA_0244	BAA_0244		BAA_0244	208775	209104	+	hypothetical protein	identified by glimmer%3B putative	gene	gene238	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0244
BAA_0245	BAA_0245		BAA_0245	209223	210059	+	yitT family protein	identified by match to protein family HMM PF02588	gene	gene239	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0245
BAA_0246	BAA_0246		BAA_0246	210197	210553	+	conserved hypothetical protein	identified by match to protein family HMM PF06486%3B match to protein family HMM TIGR01655	gene	gene240	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0246
BAA_0247	BAA_0247		BAA_0247	211125	211238	+	hypothetical protein	identified by glimmer%3B putative	gene	gene241	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0247
BAA_0248	BAA_0248		BAA_0248	211297	212061	+	putative deoxyribonuclease%2C TatD family	identified by match to protein family HMM PF01026	gene	gene242	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0248
BAA_0249	BAA_0249		BAA_0249	212164	213813	-	conserved hypothetical protein		gene	gene243	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0249
BAA_0250	BAA_0250		BAA_0250	214064	214597	+	invasion protein IagB domain protein	identified by match to protein family HMM PF01464	gene	gene244	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0250
BAA_0251	BAA_0251		BAA_0251	214613	215395	-	conserved hypothetical protein		gene	gene245	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0251
BAA_0252	BAA_0252		BAA_0252	215530	215652	-	conserved hypothetical protein		gene	gene246	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0252
BAA_0253	BAA_0253		BAA_0253	216022	216213	+	conserved domain protein		gene	gene247	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0253
BAA_0254	BAA_0254		BAA_0254	216259	216387	-	hypothetical protein	identified by glimmer%3B putative	gene	gene248	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0254
BAA_0255	BAA_0255		BAA_0255	216338	218218	+	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene249	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0255
BAA_0256	BAA_0256		BAA_0256	218460	218657	-	hypothetical protein	identified by glimmer%3B putative	gene	gene250	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0256
BAA_0257	BAA_0257		BAA_0257	218758	218877	+	hypothetical protein	identified by glimmer%3B putative	gene	gene251	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0257
BAA_0258	BAA_0258		BAA_0258	219175	220842	+	putative oligopeptide ABC transporter%2C oligopeptide-binding protein	identified by match to protein family HMM PF00496	gene	gene252	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0258
BAA_0259	BAA_0259		BAA_0259	220951	221907	+	oligopeptide ABC transporter%2C permease protein	identified by match to protein family HMM PF00528	gene	gene253	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0259
BAA_0260	BAA_0260		BAA_0260	221920	222843	+	oligopeptide ABC transporter%2C permease protein	identified by match to protein family HMM PF00528	gene	gene254	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0260
BAA_0261	BAA_0261		BAA_0261	222854	223834	+	oligopeptide ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727	gene	gene255	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0261
BAA_0262	BAA_0262		BAA_0262	224831	225523	-		hydrolase%2C haloacid dehalogenase-like family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF08282	pseudogene	gene257	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0262
BAA_0263	BAA_0263		BAA_0263	223831	224841	+		oligopeptide ABC transporter%2C ATP-binding protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727	pseudogene	gene256	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0263
BAA_0264	BAA_0264		BAA_0264	225474	225704	-		hydrolase%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene258	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0264
BAA_0265	BAA_0265		BAA_0265	225830	226006	+	conserved hypothetical protein		gene	gene259	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0265
BAA_0266	BAA_0266		BAA_0266	226296	226415	+	hypothetical protein	identified by glimmer%3B putative	gene	gene260	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0266
BAA_0267	BAA_0267	hppD	hppD	226726	227844	+	4-hydroxyphenylpyruvate dioxygenase	identified by match to protein family HMM PF00903%3B match to protein family HMM TIGR01263	gene	gene261	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0267
BAA_0268	BAA_0268		BAA_0268	227908	228867	+	fumarylacetoacetate hydrolase family protein	identified by match to protein family HMM PF01557	gene	gene262	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0268
BAA_0269	BAA_0269		BAA_0269	228833	230005	+	putative homogentisate 1%2C2-dioxygenase	identified by match to protein family HMM PF04209	gene	gene263	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0269
BAA_0270	BAA_0270		BAA_0270	230239	231510	+	major facilitator family transporter	identified by match to protein family HMM PF07690	gene	gene264	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0270
BAA_0271	BAA_0271		BAA_0271	231893	232369	+		D-alanine--D-alanine ligase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01820	pseudogene	gene265	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0271
BAA_0272	BAA_0272		BAA_0272	232704	232979	+	D-alanine--D-alanine ligase		gene	gene266	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0272
BAA_0273	BAA_0273	murF	murF	233040	234416	+	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase	identified by match to protein family HMM PF01225%3B match to protein family HMM PF02875%3B match to protein family HMM PF08245%3B match to protein family HMM TIGR01143	gene	gene267	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0273
BAA_0274	BAA_0274		BAA_0274	234721	236307	+	ATP-dependent RNA helicase%2C DEAD/DEAH box family	identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271	gene	gene268	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0274
BAA_0275	BAA_0275		BAA_0275	237359	237931	-	rhomboid family protein	identified by match to protein family HMM PF01694	gene	gene270	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0275
BAA_0276	BAA_0276	uvdE_1	uvdE_1	236404	237366	+	UV damage endonuclease UvdE	identified by match to protein family HMM PF03851%3B match to protein family HMM TIGR00629	gene	gene269	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0276
BAA_0277	BAA_0277	acpS	acpS	238024	238383	+	holo-(acyl-carrier-protein) synthase	identified by match to protein family HMM PF01648%3B match to protein family HMM TIGR00516%3B match to protein family HMM TIGR00556	gene	gene271	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0277
BAA_0278	BAA_0278		BAA_0278	238477	239490	+	putative lipoprotein		gene	gene272	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0278
BAA_0279	BAA_0279	dal1	dal1	239609	240778	+	alanine racemase	identified by match to protein family HMM PF00842%3B match to protein family HMM PF01168%3B match to protein family HMM TIGR00492	gene	gene273	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0279
BAA_0280	BAA_0280		BAA_0280	241088	241375	+	conserved hypothetical protein		gene	gene274	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0280
BAA_0281	BAA_0281		BAA_0281	241380	241730	+	transcriptional regulator%2C PemK family	identified by match to protein family HMM PF02452	gene	gene275	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0281
BAA_0282	BAA_0282		BAA_0282	241798	243966	+	S1 RNA binding domain protein	identified by match to protein family HMM PF00575%3B match to protein family HMM PF09371	gene	gene276	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0282
BAA_0283	BAA_0283		BAA_0283	244336	244794	+	conserved hypothetical protein	identified by match to protein family HMM PF03926	gene	gene277	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0283
BAA_0284	BAA_0284		BAA_0284	244908	244984	+	tRNA-Asn		tRNA	gene278	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0284
BAA_0285	BAA_0285		BAA_0285	244986	245078	+	tRNA-Ser		tRNA	gene279	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0285
BAA_0286	BAA_0286		BAA_0286	245085	245161	+	tRNA-Glu		tRNA	gene280	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0286
BAA_0287	BAA_0287		BAA_0287	245165	245240	+	tRNA-Val		tRNA	gene281	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0287
BAA_0288	BAA_0288		BAA_0288	245286	245363	+	tRNA-Asp		tRNA	gene282	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0288
BAA_0289	BAA_0289		BAA_0289	245451	245525	+	tRNA-Gln		tRNA	gene283	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0289
BAA_0290	BAA_0290		BAA_0290	245531	245606	+	tRNA-Lys		tRNA	gene284	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0290
BAA_0291	BAA_0291		BAA_0291	245621	245706	+	tRNA-Leu		tRNA	gene285	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0291
BAA_0292	BAA_0292		BAA_0292	245802	245878	+	tRNA-Arg		tRNA	gene286	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0292
BAA_0293	BAA_0293		BAA_0293	245883	245959	+	tRNA-Pro		tRNA	gene287	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0293
BAA_0294	BAA_0294		BAA_0294	245961	246034	+	tRNA-Gly		tRNA	gene288	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0294
BAA_0295	BAA_0295	rrs_5	rrs_5	246133	247641	+	16S ribosomal RNA		rRNA	gene289	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0295
BAA_0296	BAA_0296		BAA_0296	247844	248275	-		conserved hypothetical protein%3B this region contains one or more premature stops and/or frameshifts	pseudogene	gene291	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0296
BAA_0297	BAA_0297	rrl_5	rrl_5	247820	250727	+	23S ribosomal RNA		rRNA	gene290	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0297
BAA_0298	BAA_0298	rrf_5	rrf_5	250777	250892	+	5S ribosomal RNA		rRNA	gene292	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0298
BAA_0299	BAA_0299		BAA_0299	250904	250982	+	tRNA-Met		tRNA	gene293	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0299
BAA_0300	BAA_0300		BAA_0300	250984	251061	+	tRNA-Asp		tRNA	gene294	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0300
BAA_0301	BAA_0301		BAA_0301	251235	251708	+	conserved hypothetical protein TIGR00150	identified by match to protein family HMM PF02367%3B match to protein family HMM TIGR00150	gene	gene295	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0301
BAA_0302	BAA_0302		BAA_0302	251689	252381	+	conserved hypothetical protein	identified by match to protein family HMM PF00814	gene	gene296	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0302
BAA_0303	BAA_0303	rimI	rimI	252395	252838	+	ribosomal-protein-alanine acetyltransferase	identified by match to protein family HMM PF00583%3B match to protein family HMM TIGR01575	gene	gene297	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0303
BAA_0304	BAA_0304		BAA_0304	252838	253854	+	putative O-sialoglycoprotein endopeptidase	identified by match to protein family HMM PF00814%3B match to protein family HMM TIGR00329	gene	gene298	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0304
BAA_0305	BAA_0305		BAA_0305	254336	256258	-	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene299	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0305
BAA_0306	BAA_0306		BAA_0306	256446	257075	+	conserved hypothetical protein	identified by match to protein family HMM PF02629%3B match to protein family HMM PF06971	gene	gene300	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0306
BAA_0307	BAA_0307		BAA_0307	257293	258042	-	CAAX amino terminal protease family protein	identified by match to protein family HMM PF02517	gene	gene301	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0307
BAA_0308	BAA_0308	groES	groES	258443	258727	+	chaperonin%2C 10 kDa	identified by match to protein family HMM PF00166	gene	gene302	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0308
BAA_0309	BAA_0309	groL	groL	258766	260400	+	chaperonin GroL	identified by match to protein family HMM PF00118%3B match to protein family HMM TIGR02348	gene	gene303	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0309
BAA_0311	BAA_0311	guaA	guaA	260799	262346	+	GMP synthase	identified by match to protein family HMM PF00117%3B match to protein family HMM PF00958%3B match to protein family HMM TIGR00884%3B match to protein family HMM TIGR00888	gene	gene304	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0311
BAA_0313	BAA_0313		BAA_0313	262731	264056	+	xanthine/uracil permease family protein	identified by match to protein family HMM PF00860	gene	gene305	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0313
BAA_0314	BAA_0314		BAA_0314	264201	264902	+	DNA-binding response regulator	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486	gene	gene306	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0314
BAA_0315	BAA_0315		BAA_0315	264934	266391	+	sensor histidine kinase	identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518	gene	gene307	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0315
BAA_0316	BAA_0316	rrs_6	rrs_6	266712	268220	+	16S ribosomal RNA		rRNA	gene308	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0316
BAA_0317	BAA_0317		BAA_0317	268423	268854	-		conserved hypothetical protein%3B this region contains one or more premature stops and/or frameshifts	pseudogene	gene310	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0317
BAA_0318	BAA_0318	rrl_6	rrl_6	268399	271306	+	23S ribosomal RNA		rRNA	gene309	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0318
BAA_0319	BAA_0319	rrf_6	rrf_6	271356	271471	+	5S ribosomal RNA		rRNA	gene311	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0319
BAA_0320	BAA_0320		BAA_0320	271609	272562	-		conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene312	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0320
BAA_0321	BAA_0321		BAA_0321	272795	273667	-	conserved domain protein	identified by match to protein family HMM PF08241%3B match to protein family HMM PF08242	gene	gene313	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0321
BAA_0322	BAA_0322		BAA_0322	273694	274416	-	conserved domain protein	identified by match to protein family HMM PF08241	gene	gene314	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0322
BAA_0323	BAA_0323		BAA_0323	274720	275514	-	hypothetical protein	identified by glimmer%3B putative	gene	gene315	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0323
BAA_0324	BAA_0324		BAA_0324	275946	276719	+		UDP-glucose 4-epimerase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01370	pseudogene	gene316	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0324
BAA_0325	BAA_0325		BAA_0325	276760	277533	-	conserved domain protein	identified by match to protein family HMM PF08241%3B match to protein family HMM PF08242	gene	gene317	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0325
BAA_0326	BAA_0326		BAA_0326	277601	278035	-		glycosyl transferase%2C group 1 family%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene318	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0326
BAA_0327	BAA_0327		BAA_0327	278201	279532	-		glycosyl transferase%2C group 1 family%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF00534	pseudogene	gene319	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0327
BAA_0328	BAA_0328	rrs_7	rrs_7	280010	281518	+	16S ribosomal RNA		rRNA	gene320	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0328
BAA_0331	BAA_0331	rrl_7	rrl_7	281697	284604	+	23S ribosomal RNA		rRNA	gene321	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0331
BAA_0332	BAA_0332	rrf_7	rrf_7	284655	284770	+	5S ribosomal RNA		rRNA	gene322	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0332
BAA_0333	BAA_0333	uppP	uppP	285221	286018	-	undecaprenyl-diphosphatase UppP	identified by match to protein family HMM PF02673%3B match to protein family HMM TIGR00753	gene	gene323	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0333
BAA_0334	BAA_0334		BAA_0334	286036	286773	-	putative bacitracin ABC transporter%2C permease protein		gene	gene324	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0334
BAA_0335	BAA_0335		BAA_0335	286766	287695	-	putative bacitracin ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene325	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0335
BAA_0336	BAA_0336		BAA_0336	287764	288777	-	putative sensor histidine kinase	identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518	gene	gene326	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0336
BAA_0337	BAA_0337		BAA_0337	288767	289480	-	DNA-binding response regulator	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486	gene	gene327	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0337
BAA_0338	BAA_0338	rrs_8	rrs_8	289983	291491	+	16S ribosomal RNA		rRNA	gene328	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0338
BAA_0339	BAA_0339		BAA_0339	291694	292125	-		conserved hypothetical protein%3B this region contains one or more premature stops and/or frameshifts	pseudogene	gene330	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0339
BAA_0340	BAA_0340	rrl_8	rrl_8	291670	294577	+	23S ribosomal RNA		rRNA	gene329	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0340
BAA_0341	BAA_0341	rrf_8	rrf_8	294628	294743	+	5S ribosomal RNA		rRNA	gene331	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0341
BAA_0343	BAA_0343	purE	purE	295442	295927	+	phosphoribosylaminoimidazole carboxylase%2C catalytic subunit	identified by match to protein family HMM PF00731%3B match to protein family HMM TIGR01162	gene	gene332	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0343
BAA_0344	BAA_0344	purK	purK	295924	297075	+	phosphoribosylaminoimidazole carboxylase%2C ATPase subunit	identified by match to protein family HMM PF02222%3B match to protein family HMM PF02655%3B match to protein family HMM TIGR01161	gene	gene333	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0344
BAA_0345	BAA_0345	purB	purB	297072	298379	+	adenylosuccinate lyase	identified by match to protein family HMM PF00206%3B match to protein family HMM TIGR00928	gene	gene334	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0345
BAA_0346	BAA_0346	purC	purC	298468	299187	+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	identified by match to protein family HMM PF01259%3B match to protein family HMM TIGR00081	gene	gene335	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0346
BAA_0347	BAA_0347	purS	purS	299180	299434	+	phosphoribosylformylglycinamidine synthase%2C purS protein	identified by match to protein family HMM PF02700%3B match to protein family HMM TIGR00302	gene	gene336	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0347
BAA_0348	BAA_0348	purQ	purQ	299431	300114	+	phosphoribosylformylglycinamidine synthase I	identified by match to protein family HMM PF00117%3B match to protein family HMM PF07685%3B match to protein family HMM TIGR01737	gene	gene337	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0348
BAA_0349	BAA_0349	purL	purL	300098	302317	+	phosphoribosylformylglycinamidine synthase II	identified by match to protein family HMM PF00586%3B match to protein family HMM PF02769%3B match to protein family HMM TIGR01736	gene	gene338	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0349
BAA_0350	BAA_0350	purF	purF	302302	303717	+	amidophosphoribosyltransferase	identified by match to protein family HMM PF00156%3B match to protein family HMM PF00310%3B match to protein family HMM TIGR01134	gene	gene339	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0350
BAA_0351	BAA_0351	purM	purM	303824	304864	+	phosphoribosylformylglycinamidine cyclo-ligase	identified by match to protein family HMM PF00586%3B match to protein family HMM PF02769%3B match to protein family HMM TIGR00878	gene	gene340	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0351
BAA_0352	BAA_0352	purN	purN	304861	305448	+	phosphoribosylglycinamide formyltransferase	identified by match to protein family HMM PF00551%3B match to protein family HMM TIGR00639	gene	gene341	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0352
BAA_0353	BAA_0353	purH	purH	305473	307008	+	phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	identified by match to protein family HMM PF01808%3B match to protein family HMM PF02142%3B match to protein family HMM TIGR00355	gene	gene342	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0353
BAA_0354	BAA_0354	purD	purD	307130	308401	+	phosphoribosylamine--glycine ligase	identified by match to protein family HMM PF01071%3B match to protein family HMM PF02222%3B match to protein family HMM PF02655%3B match to protein family HMM PF02843%3B match to protein family HMM PF02844%3B match to protein family HMM PF08442%3B match to protein family HMM TIGR00877	gene	gene343	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0354
BAA_0355	BAA_0355		BAA_0355	308437	308601	-	conserved domain protein		gene	gene344	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0355
BAA_0356	BAA_0356		BAA_0356	308618	309463	-	SPFH domain/band 7 family protein	identified by match to protein family HMM PF01145	gene	gene345	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0356
BAA_0357	BAA_0357		BAA_0357	309673	310050	-	conserved hypothetical protein		gene	gene346	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0357
BAA_0358	BAA_0358		BAA_0358	310385	311074	+	pcrB family protein	identified by match to protein family HMM PF01884%3B match to protein family HMM TIGR01768	gene	gene347	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0358
BAA_0359	BAA_0359	pcrA	pcrA	311075	313330	+	ATP-dependent DNA helicase PcrA	identified by match to protein family HMM PF00580%3B match to protein family HMM TIGR01073	gene	gene348	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0359
BAA_0360	BAA_0360	ligA	ligA	313346	315355	+	DNA ligase%2C NAD-dependent	identified by match to protein family HMM PF00533%3B match to protein family HMM PF00633%3B match to protein family HMM PF01653%3B match to protein family HMM PF03119%3B match to protein family HMM PF03120%3B match to protein family HMM TIGR00575	gene	gene349	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0360
BAA_0361	BAA_0361		BAA_0361	315372	316565	+	putative lipoprotein	identified by match to protein family HMM PF07537	gene	gene350	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0361
BAA_0362	BAA_0362		BAA_0362	316661	317431	+	putative membrane protein	identified by match to protein family HMM PF01925	gene	gene351	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0362
BAA_0363	BAA_0363		BAA_0363	317585	319132	+	putative delta-1-pyrroline-5-carboxylate dehydrogenase	identified by match to protein family HMM PF00171%3B match to protein family HMM TIGR01237	gene	gene352	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0363
BAA_0364	BAA_0364		BAA_0364	319318	319467	+	conserved hypothetical protein		gene	gene353	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0364
BAA_0365	BAA_0365		BAA_0365	319699	320262	-	isochorismatase family protein	identified by match to protein family HMM PF00857	gene	gene354	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0365
BAA_0367	BAA_0367		BAA_0367	320735	321754	+	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005%3B match to protein family HMM PF09383	gene	gene355	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0367
BAA_0368	BAA_0368		BAA_0368	321744	322409	+	ABC transporter%2C permease protein	identified by match to protein family HMM PF00528	gene	gene356	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0368
BAA_0369	BAA_0369		BAA_0369	322431	323285	+	putative ABC transporter%2C substrate-binding protein	identified by match to protein family HMM PF03180	gene	gene357	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0369
BAA_0370	BAA_0370		BAA_0370	323452	323922	-	hypothetical protein	identified by glimmer%3B putative	gene	gene358	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0370
BAA_0371	BAA_0371		BAA_0371	323981	324172	-	hypothetical protein	identified by glimmer%3B putative	gene	gene359	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0371
BAA_0372	BAA_0372		BAA_0372	324165	324818	-		anion-transporting ATPase family protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene360	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0372
BAA_0373	BAA_0373		BAA_0373	324836	325345	-		arsenite-activated ATPase ArsA%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02374	pseudogene	gene361	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0373
BAA_0374	BAA_0374		BAA_0374	325422	325904	-	transcriptional regulator%2C MarR family	identified by match to protein family HMM PF01047	gene	gene362	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0374
BAA_0375	BAA_0375		BAA_0375	326136	326252	+		conserved hypothetical protein%3B this region contains one or more premature stops and/or frameshifts	pseudogene	gene363	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0375
BAA_0376	BAA_0376	gatC	gatC	326515	326805	+	glutamyl-tRNA(Gln) amidotransferase%2C C subunit	identified by match to protein family HMM PF02686%3B match to protein family HMM TIGR00135	gene	gene364	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0376
BAA_0377	BAA_0377	gatA	gatA	326821	328278	+	glutamyl-tRNA(Gln) amidotransferase%2C A subunit	identified by match to protein family HMM PF01425%3B match to protein family HMM TIGR00132	gene	gene365	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0377
BAA_0378	BAA_0378	gatB	gatB	328293	329720	+	glutamyl-tRNA(Gln) amidotransferase%2C B subunit	identified by match to protein family HMM PF01162%3B match to protein family HMM PF02637%3B match to protein family HMM PF02934%3B match to protein family HMM TIGR00133	gene	gene366	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0378
BAA_0379	BAA_0379		BAA_0379	330191	331096	+	conserved hypothetical protein TIGR00147	identified by match to protein family HMM PF00781%3B match to protein family HMM TIGR00147	gene	gene367	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0379
BAA_0380	BAA_0380		BAA_0380	331236	331979	+	haloacid dehalogenase/epoxide hydrolase family protein	identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01549	gene	gene368	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0380
BAA_0381	BAA_0381	gabT	gabT	332062	333498	+	4-aminobutyrate transaminase	identified by match to protein family HMM PF00202%3B match to protein family HMM TIGR00700	gene	gene369	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0381
BAA_0382	BAA_0382		BAA_0382	333611	334978	+	sensory box sigma-54 dependent DNA-binding response regulator	identified by match to protein family HMM PF00158%3B match to protein family HMM PF07728%3B match to protein family HMM PF08448%3B match to protein family HMM TIGR00229	gene	gene370	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0382
BAA_0383	BAA_0383	gabD	gabD	334971	336422	+	succinate-semialdehyde dehydrogenase (NADP+)	identified by match to protein family HMM PF00171%3B match to protein family HMM TIGR01780	gene	gene371	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0383
BAA_0384	BAA_0384		BAA_0384	336470	336793	+	multidrug resistance protein%2C Smr family	identified by match to protein family HMM PF00893	gene	gene372	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0384
BAA_0385	BAA_0385	ampS	ampS	336833	338062	-	aminopeptidase AmpS	identified by match to protein family HMM PF02073	gene	gene373	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0385
BAA_0386	BAA_0386		BAA_0386	338179	339261	-	polysaccharide deacetylase-like protein	identified by match to protein family HMM PF01522	gene	gene374	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0386
BAA_0387	BAA_0387		BAA_0387	339413	340516	-	polysaccharide deacetylase	identified by match to protein family HMM PF01522	gene	gene375	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0387
BAA_0388	BAA_0388		BAA_0388	340756	341952	-	nucleoside transporter%2C NupC family	identified by match to protein family HMM PF01773%3B match to protein family HMM PF07662%3B match to protein family HMM PF07670	gene	gene376	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0388
BAA_0390	BAA_0390		BAA_0390	342378	343754	+	RNA methyltransferase%2C TrmA family	identified by match to protein family HMM PF01938%3B match to protein family HMM PF02475%3B match to protein family HMM PF05958%3B match to protein family HMM TIGR00479	gene	gene377	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0390
BAA_0391	BAA_0391		BAA_0391	343851	344840	+	conserved hypothetical protein	identified by match to protein family HMM PF01207	gene	gene378	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0391
BAA_0392	BAA_0392		BAA_0392	345101	345670	+	hypothetical protein	identified by glimmer%3B putative	gene	gene379	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0392
BAA_0393	BAA_0393		BAA_0393	345943	346461	+	conserved hypothetical protein	identified by match to protein family HMM PF07308	gene	gene380	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0393
BAA_0394	BAA_0394		BAA_0394	346556	347263	+	conserved hypothetical protein	identified by match to protein family HMM PF01863	gene	gene381	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0394
BAA_0395	BAA_0395		BAA_0395	347463	348158	-	conserved hypothetical protein		gene	gene382	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0395
BAA_0396	BAA_0396		BAA_0396	348173	349282	-	mandelate racemase/muconate lactonizing enzyme family protein	identified by match to protein family HMM PF01188%3B match to protein family HMM PF02746	gene	gene383	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0396
BAA_0397	BAA_0397	nhaC1	nhaC1	350635	352056	-	Na+/H+ antiporter NhaC	identified by match to protein family HMM PF03553%3B match to protein family HMM PF03600%3B match to protein family HMM TIGR00931	gene	gene385	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0397
BAA_0398	BAA_0398		BAA_0398	349375	350646	+	transcriptional regulator domain protein		gene	gene384	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0398
BAA_0399	BAA_0399	amhX	amhX	352336	353451	+	amidohydrolase amhX	identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01891	gene	gene386	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0399
BAA_0400	BAA_0400		BAA_0400	353603	354211	+	conserved domain protein		gene	gene387	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0400
BAA_0401	BAA_0401	ahpF	ahpF	354256	355782	-	alkyl hydroperoxide reductase%2C F subunit	identified by match to protein family HMM PF00070%3B match to protein family HMM PF01134%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR03140	gene	gene388	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0401
BAA_0402	BAA_0402	ahpC	ahpC	355797	356360	-	peroxiredoxin	identified by match to protein family HMM PF00578%3B match to protein family HMM PF08534%3B match to protein family HMM TIGR03137	gene	gene389	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0402
BAA_0403	BAA_0403		BAA_0403	356951	358180	+	putative 5-methylthioribose kinase	identified by match to protein family HMM TIGR01767	gene	gene390	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0403
BAA_0404	BAA_0404	mtnA_1	mtnA_1	358190	359236	+	S-methyl-5-thioribose-1-phosphate isomerase	identified by match to protein family HMM PF01008%3B match to protein family HMM TIGR00512%3B match to protein family HMM TIGR00524	gene	gene391	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0404
BAA_0405	BAA_0405		BAA_0405	359291	359932	+	aldolase%2C class II	identified by match to protein family HMM PF00596	gene	gene392	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0405
BAA_0406	BAA_0406		BAA_0406	359973	360980	-	iron compound ABC transporter%2C permease protein	identified by match to protein family HMM PF01032	gene	gene393	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0406
BAA_0407	BAA_0407		BAA_0407	360977	362017	-	iron compound ABC transporter%2C permease protein	identified by match to protein family HMM PF01032	gene	gene394	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0407
BAA_0408	BAA_0408		BAA_0408	362066	362983	-	iron compound ABC transporter%2C iron compound-binding protein	identified by match to protein family HMM PF01497	gene	gene395	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0408
BAA_0409	BAA_0409		BAA_0409	363316	364365	+	pyridine nucleotide-disulfide oxidoreductase family protein	identified by match to protein family HMM PF00070%3B match to protein family HMM PF01134%3B match to protein family HMM PF03486%3B match to protein family HMM PF07992	gene	gene396	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0409
BAA_0410	BAA_0410		BAA_0410	364562	364930	-	hypothetical protein	identified by glimmer%3B putative	gene	gene397	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0410
BAA_0411	BAA_0411		BAA_0411	365112	365351	+	DNA binding domain%2C excisionase family	identified by match to protein family HMM TIGR01764	gene	gene398	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0411
BAA_0412	BAA_0412		BAA_0412	365587	366108	+	putative spore coat protein B		gene	gene399	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0412
BAA_0413	BAA_0413		BAA_0413	366129	366578	+	spore coat protein B		gene	gene400	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0413
BAA_0414	BAA_0414		BAA_0414	366741	367409	+	conserved hypothetical protein		gene	gene401	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0414
BAA_0415	BAA_0415		BAA_0415	367646	368911	+	hypothetical protein	identified by glimmer%3B putative	gene	gene402	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0415
BAA_0416	BAA_0416		BAA_0416	369033	369149	+		histidine kinase%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene403	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0416
BAA_0417	BAA_0417		BAA_0417	369193	369309	+		sporulation kinase%3B this region contains one or more premature stops and/or frameshifts	pseudogene	gene404	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0417
BAA_0418	BAA_0418		BAA_0418	369371	369565	+		sensor histidine kinase domain protein%3B this region contains one or more premature stops and/or frameshifts	pseudogene	gene405	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0418
BAA_0419	BAA_0419		BAA_0419	369789	370169	+	hypothetical protein	identified by glimmer%3B putative	gene	gene406	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0419
BAA_0420	BAA_0420		BAA_0420	370198	370830	-	putative cyclase	identified by match to protein family HMM PF04199	gene	gene407	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0420
BAA_0422	BAA_0422		BAA_0422	371179	372288	+	conserved hypothetical protein		gene	gene408	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0422
BAA_0423	BAA_0423		BAA_0423	372411	373193	+	conserved hypothetical protein		gene	gene409	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0423
BAA_0424	BAA_0424		BAA_0424	373208	374509	-	putative benzoate transport protein	identified by match to protein family HMM PF00083%3B match to protein family HMM PF07690	gene	gene410	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0424
BAA_0425	BAA_0425		BAA_0425	374653	376179	-	putative Rieske 2Fe-2S iron-sulfur protein	identified by match to protein family HMM PF00355%3B match to protein family HMM PF01266	gene	gene411	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0425
BAA_0426	BAA_0426		BAA_0426	376762	377847	+	stearoyl-CoA 9-desaturase	identified by match to protein family HMM PF00487	gene	gene412	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0426
BAA_0427	BAA_0427		BAA_0427	377900	378592	-	putative amino acid ABC transporter%2C permease protein	identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01726	gene	gene413	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0427
BAA_0428	BAA_0428		BAA_0428	378687	379481	-	putative amino acid ABC transporter%2C amino acid-binding protein	identified by match to protein family HMM PF00497	gene	gene414	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0428
BAA_0429	BAA_0429		BAA_0429	379603	380325	-	amino acid ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene415	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0429
BAA_0430	BAA_0430		BAA_0430	380495	382219	-	methyl-accepting chemotaxis protein	identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672	gene	gene416	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0430
BAA_0431	BAA_0431		BAA_0431	382427	383719	+	methyl-accepting chemotaxis protein	identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672	gene	gene417	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0431
BAA_0432	BAA_0432		BAA_0432	383956	385620	+	glycosyl hydrolase family protein	identified by match to protein family HMM PF00128	gene	gene418	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0432
BAA_0433	BAA_0433		BAA_0433	385793	387430	+	PTS system%2C IIBC component	identified by match to protein family HMM PF00367%3B match to protein family HMM PF02378%3B match to protein family HMM TIGR00826%3B match to protein family HMM TIGR02003	gene	gene419	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0433
BAA_0434	BAA_0434		BAA_0434	387435	388226	+	endonuclease/exonuclease/phosphatase family protein	identified by match to protein family HMM PF03372	gene	gene420	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0434
BAA_0435	BAA_0435		BAA_0435	388245	388400	+	hypothetical protein	identified by glimmer%3B putative	gene	gene421	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0435
BAA_0436	BAA_0436		BAA_0436	388532	391357	+	conserved domain protein	identified by match to protein family HMM PF01061%3B match to protein family HMM TIGR03061%3B match to protein family HMM TIGR03062	gene	gene422	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0436
BAA_0437	BAA_0437	topB1	topB1	391398	393587	-	DNA topoisomerase III	identified by match to protein family HMM PF01131%3B match to protein family HMM PF01751%3B match to protein family HMM TIGR01056	gene	gene423	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0437
BAA_0439	BAA_0439	thiM	thiM	393996	394802	+	hydroxyethylthiazole kinase	identified by match to protein family HMM PF02110%3B match to protein family HMM TIGR00694	gene	gene424	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0439
BAA_0440	BAA_0440	thiE	thiE	394819	395478	+	thiamine-phosphate diphosphorylase	identified by match to protein family HMM PF02581%3B match to protein family HMM TIGR00693	gene	gene425	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0440
BAA_0441	BAA_0441		BAA_0441	395594	396907	-	anaerobic C4-dicarboxylate membrane transporter	identified by match to protein family HMM PF03605%3B match to protein family HMM TIGR00770	gene	gene426	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0441
BAA_0442	BAA_0442		BAA_0442	397418	399157	+	methyl-accepting chemotaxis protein	identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672	gene	gene427	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0442
BAA_0444	BAA_0444		BAA_0444	399421	399741	+	conserved hypothetical protein	identified by match to protein family HMM PF01910	gene	gene428	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0444
BAA_0445	BAA_0445		BAA_0445	399710	400486	+	putative ABC transporter%2C permease protein	identified by match to protein family HMM PF00528	gene	gene429	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0445
BAA_0446	BAA_0446		BAA_0446	400483	401481	+	putative ABC transporter%2C substrate-binding protein	identified by match to protein family HMM PF09084	gene	gene430	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0446
BAA_0447	BAA_0447		BAA_0447	401478	402227	+	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene431	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0447
BAA_0448	BAA_0448		BAA_0448	402519	404063	+	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene432	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0448
BAA_0449	BAA_0449		BAA_0449	404524	406548	-	chitinase B	identified by match to protein family HMM PF00041%3B match to protein family HMM PF00553%3B match to protein family HMM PF00704	gene	gene433	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0449
BAA_0450	BAA_0450		BAA_0450	406920	407291	+	conserved hypothetical protein	identified by match to protein family HMM PF09350	gene	gene434	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0450
BAA_0451	BAA_0451		BAA_0451	407302	407616	+	conserved hypothetical protein		gene	gene435	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0451
BAA_0452	BAA_0452		BAA_0452	407630	407881	+	hypothetical protein	identified by glimmer%3B putative	gene	gene436	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0452
BAA_0453	BAA_0453		BAA_0453	408164	408745	+	transcriptional regulator%2C TetR family	identified by match to protein family HMM PF00440%3B match to protein family HMM PF08360	gene	gene437	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0453
BAA_0454	BAA_0454		BAA_0454	408812	410044	+	major facilitator family transporter	identified by match to protein family HMM PF07690	gene	gene438	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0454
BAA_0455	BAA_0455		BAA_0455	410158	410352	+	DNA-binding protein	identified by match to protein family HMM PF01381	gene	gene439	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0455
BAA_0456	BAA_0456		BAA_0456	410365	410757	+	putative membrane protein		gene	gene440	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0456
BAA_0457	BAA_0457		BAA_0457	410784	412067	-	putative membrane protein	identified by match to protein family HMM PF07690	gene	gene441	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0457
BAA_0458	BAA_0458		BAA_0458	412176	413489	-	type I phosphodiesterase/nucleotide pyrophosphatase family protein	identified by match to protein family HMM PF01663	gene	gene442	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0458
BAA_0459	BAA_0459		BAA_0459	413643	413936	+	conserved hypothetical protein		gene	gene443	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0459
BAA_0460	BAA_0460	proS1	proS1	414284	415810	+		proline--tRNA ligase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00587%3B match to protein family HMM PF03129%3B match to protein family HMM PF09180%3B match to protein family HMM TIGR00408	pseudogene	gene444	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0460
BAA_0461	BAA_0461		BAA_0461	415815	416588	-	LPXTG-motif cell wall anchor domain protein	identified by match to protein family HMM TIGR01167	gene	gene445	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0461
BAA_0462	BAA_0462		BAA_0462	416791	417669	+	ROK family protein	identified by match to protein family HMM PF00480	gene	gene446	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0462
BAA_0463	BAA_0463		BAA_0463	417798	418394	+	putative tellurium resistance protein	identified by match to protein family HMM PF02342	gene	gene447	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0463
BAA_0464	BAA_0464		BAA_0464	418418	419002	+	tellurium resistance protein	identified by match to protein family HMM PF02342	gene	gene448	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0464
BAA_0465	BAA_0465		BAA_0465	419083	419667	+	tellurium resistance protein	identified by match to protein family HMM PF02342	gene	gene449	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0465
BAA_0466	BAA_0466		BAA_0466	419741	420532	+	putative tellurium resistance protein	identified by match to protein family HMM PF03741	gene	gene450	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0466
BAA_0467	BAA_0467		BAA_0467	420642	422273	+	conserved hypothetical protein		gene	gene451	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0467
BAA_0468	BAA_0468		BAA_0468	422292	423374	+	putative tellurite resistance protein	identified by match to protein family HMM PF05816	gene	gene452	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0468
BAA_0469	BAA_0469		BAA_0469	423410	426076	-	cation-transporting ATPase%2C E1-E2 family	identified by match to protein family HMM PF00122%3B match to protein family HMM PF00689%3B match to protein family HMM PF00690%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494	gene	gene453	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0469
BAA_0470	BAA_0470		BAA_0470	426268	426492	-	conserved hypothetical protein	identified by match to protein family HMM PF06569	gene	gene454	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0470
BAA_0471	BAA_0471		BAA_0471	426667	427131	+	low molecular weight phosphotyrosine protein phosphatase family protein	identified by match to protein family HMM PF01451	gene	gene455	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0471
BAA_0472	BAA_0472		BAA_0472	427185	427667	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene456	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0472
BAA_0473	BAA_0473	yihY	yihY	427706	428575	+	YihY family protein	identified by match to protein family HMM PF03631%3B match to protein family HMM TIGR00765	gene	gene457	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0473
BAA_0474	BAA_0474		BAA_0474	428760	430685	-	heavy metal-transporting ATPase	identified by match to protein family HMM PF00122%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494%3B match to protein family HMM TIGR01512%3B match to protein family HMM TIGR01525	gene	gene458	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0474
BAA_0475	BAA_0475		BAA_0475	430956	431906	+	transporter%2C EamA family	identified by match to protein family HMM PF00892	gene	gene459	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0475
BAA_0476	BAA_0476		BAA_0476	432029	432709	+	conserved hypothetical protein	identified by match to protein family HMM PF07947	gene	gene460	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0476
BAA_0477	BAA_0477	lepB_1	lepB_1	432942	433295	+		signal peptidase I%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00717%3B match to protein family HMM TIGR02227	pseudogene	gene461	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0477
BAA_0478	BAA_0478	sipS1	sipS1	433292	433474	+		signal peptidase I S%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene462	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0478
BAA_0479	BAA_0479		BAA_0479	433518	436280	-	hypothetical protein	identified by glimmer%3B putative	gene	gene463	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0479
BAA_0480	BAA_0480		BAA_0480	436755	437345	+	dedA family protein	identified by match to protein family HMM PF09335	gene	gene464	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0480
BAA_0481	BAA_0481		BAA_0481	437354	437782	-	transporter%2C EamA family	identified by match to protein family HMM PF00892	gene	gene465	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0481
BAA_0482	BAA_0482		BAA_0482	437889	438035	-	conserved hypothetical protein		gene	gene466	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0482
BAA_0483	BAA_0483		BAA_0483	438189	438605	-	general stress protein 26	identified by match to protein family HMM PF01243	gene	gene467	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0483
BAA_0484	BAA_0484	cax	cax	438785	439840	+	calcium/proton exchanger	identified by match to protein family HMM PF01699%3B match to protein family HMM TIGR00378%3B match to protein family HMM TIGR00846	gene	gene468	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0484
BAA_0485	BAA_0485		BAA_0485	439922	440719	+	conserved hypothetical protein		gene	gene469	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0485
BAA_0486	BAA_0486		BAA_0486	440754	441881	-	conserved hypothetical protein	identified by match to protein family HMM PF04055%3B match to protein family HMM PF08756	gene	gene470	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0486
BAA_0487	BAA_0487		BAA_0487	442095	442277	+	conserved hypothetical protein		gene	gene471	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0487
BAA_0488	BAA_0488	fumA	fumA	442484	444004	+	fumarate hydratase%2C class I	identified by match to protein family HMM PF05681%3B match to protein family HMM PF05683%3B match to protein family HMM TIGR00722%3B match to protein family HMM TIGR00723	gene	gene472	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0488
BAA_0489	BAA_0489	pdaA	pdaA	444131	444913	+	delta-lactam-biosynthetic de-N-acetylase	identified by match to protein family HMM PF01522%3B match to protein family HMM TIGR02884	gene	gene473	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0489
BAA_0490	BAA_0490		BAA_0490	444973	445161	+		conserved domain protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene474	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0490
BAA_0491	BAA_0491		BAA_0491	445195	445836	+		endonuclease III domain protein%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF00730	pseudogene	gene475	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0491
BAA_0492	BAA_0492		BAA_0492	445847	447226	+	RNA methyltransferase%2C TrmA family	identified by match to protein family HMM PF01938%3B match to protein family HMM PF05958%3B match to protein family HMM TIGR00479	gene	gene476	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0492
BAA_0493	BAA_0493		BAA_0493	447287	448411	-	prophage LambdaBa04%2C site-specific recombinase%2C phage integrase family	identified by match to protein family HMM PF00589	gene	gene477	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0493
BAA_0494	BAA_0494		BAA_0494	449127	449330	-	prophage LambdaBa04%2C DNA-binding protein		gene	gene478	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0494
BAA_0495	BAA_0495		BAA_0495	450006	451181	+	conserved hypothetical protein		gene	gene479	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0495
BAA_0496	BAA_0496		BAA_0496	451199	451345	+	hypothetical protein	identified by glimmer%3B putative	gene	gene480	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0496
BAA_0497	BAA_0497		BAA_0497	451513	451647	+	hypothetical protein	identified by glimmer%3B putative	gene	gene481	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0497
BAA_0498	BAA_0498		BAA_0498	451675	452016	-	prophage LambdaBa04%2C DNA-binding protein	identified by match to protein family HMM PF01381	gene	gene482	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0498
BAA_0499	BAA_0499		BAA_0499	452191	452412	+	prophage LambdaBa04%2C DNA-binding protein	identified by match to protein family HMM PF01381	gene	gene483	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0499
BAA_0500	BAA_0500		BAA_0500	452430	453161	+	conserved hypothetical protein	identified by match to protein family HMM PF09669%3B match to protein family HMM TIGR02681	gene	gene484	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0500
BAA_0501	BAA_0501		BAA_0501	453206	453556	+	putative prophage LambdaBa04%2C DNA binding protein		gene	gene485	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0501
BAA_0502	BAA_0502		BAA_0502	453553	453720	+	hypothetical protein	identified by glimmer%3B putative	gene	gene486	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0502
BAA_0503	BAA_0503		BAA_0503	453750	453935	+	hypothetical protein	identified by glimmer%3B putative	gene	gene487	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0503
BAA_0504	BAA_0504		BAA_0504	453932	454804	+	putative prophage LambdaBa04%2C DnaD replication protein	identified by match to protein family HMM PF04271%3B match to protein family HMM TIGR01446	gene	gene488	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0504
BAA_0505	BAA_0505		BAA_0505	454773	455576	+	putative prophage LambdaBa02%2C DNA replication protein DnaC	identified by match to protein family HMM PF01695	gene	gene489	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0505
BAA_0506	BAA_0506		BAA_0506	455592	455786	+	hypothetical protein	identified by glimmer%3B putative	gene	gene490	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0506
BAA_0507	BAA_0507		BAA_0507	455811	455984	+	hypothetical protein	identified by glimmer%3B putative	gene	gene491	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0507
BAA_0508	BAA_0508		BAA_0508	456265	456681	+	conserved domain protein		gene	gene492	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0508
BAA_0509	BAA_0509		BAA_0509	456697	457161	+	conserved hypothetical protein	identified by match to protein family HMM PF03819	gene	gene493	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0509
BAA_0510	BAA_0510		BAA_0510	457199	457378	+	hypothetical protein	identified by glimmer%3B putative	gene	gene494	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0510
BAA_0511	BAA_0511		BAA_0511	457427	457711	+	prophage LambdaBa04%2C transactivating regulatory domain protein		gene	gene495	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0511
BAA_0512	BAA_0512		BAA_0512	457911	458510	+	conserved hypothetical protein		gene	gene496	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0512
BAA_0513	BAA_0513		BAA_0513	458942	459079	+	hypothetical protein	identified by glimmer%3B putative	gene	gene497	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0513
BAA_0514	BAA_0514		BAA_0514	459123	459527	+	hypothetical protein	identified by glimmer%3B putative	gene	gene498	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0514
BAA_0515	BAA_0515		BAA_0515	459527	459973	+	conserved hypothetical protein		gene	gene499	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0515
BAA_0516	BAA_0516		BAA_0516	460014	460196	+	hypothetical protein	identified by glimmer%3B putative	gene	gene500	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0516
BAA_0517	BAA_0517		BAA_0517	460228	460602	+	hypothetical protein	identified by glimmer%3B putative	gene	gene501	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0517
BAA_0518	BAA_0518		BAA_0518	460708	461064	+	hypothetical protein	identified by glimmer%3B putative	gene	gene502	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0518
BAA_0519	BAA_0519		BAA_0519	461285	461407	+	hypothetical protein	identified by glimmer%3B putative	gene	gene503	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0519
BAA_0520	BAA_0520		BAA_0520	461523	461693	+	hypothetical protein	identified by glimmer%3B putative	gene	gene504	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0520
BAA_0521	BAA_0521		BAA_0521	461721	462203	+	phage transcriptional regulator%2C ArpU family	identified by match to protein family HMM TIGR01637	gene	gene505	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0521
BAA_0522	BAA_0522		BAA_0522	462524	462745	+		prophage LambdaBa04%2C site-specific recombinase%2C phage integrase family%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene506	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0522
BAA_0523	BAA_0523		BAA_0523	463334	463636	+	prophage LambdaBa04%2C Gp54	identified by match to protein family HMM PF01844	gene	gene507	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0523
BAA_0524	BAA_0524		BAA_0524	463633	463800	+	putative prophage LambdaBa04%2C DNA binding protein		gene	gene508	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0524
BAA_0525	BAA_0525		BAA_0525	463797	463943	+	hypothetical protein	identified by glimmer%3B putative	gene	gene509	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0525
BAA_0526	BAA_0526		BAA_0526	464044	464415	+	conserved hypothetical protein		gene	gene510	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0526
BAA_0527	BAA_0527		BAA_0527	464412	466100	+	putative prophage LambdaBa04%2C terminase%2C large subunit	identified by match to protein family HMM PF03354	gene	gene511	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0527
BAA_0528	BAA_0528		BAA_0528	466371	467336	+		prophage LambdaBa04%2C portal protein%2C truncation%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene512	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0528
BAA_0529	BAA_0529		BAA_0529	467293	467874	+	putative prophage LambdaBa04%2C prohead protease	identified by match to protein family HMM PF04586%3B match to protein family HMM TIGR01543	gene	gene513	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0529
BAA_0530	BAA_0530		BAA_0530	467893	469083	+	putative prophage LambdaBa04%2C major capsid protein	identified by match to protein family HMM PF05065%3B match to protein family HMM TIGR01554	gene	gene514	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0530
BAA_0531	BAA_0531		BAA_0531	469099	469356	+	hypothetical protein	identified by glimmer%3B putative	gene	gene515	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0531
BAA_0532	BAA_0532		BAA_0532	469353	469625	+	putative prophage LambdaBa04%2C DNA packaging protein	identified by match to protein family HMM TIGR01560	gene	gene516	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0532
BAA_0533	BAA_0533		BAA_0533	469622	469921	+	conserved hypothetical protein	identified by match to protein family HMM TIGR01563	gene	gene517	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0533
BAA_0534	BAA_0534		BAA_0534	469914	470270	+	conserved hypothetical protein		gene	gene518	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0534
BAA_0535	BAA_0535		BAA_0535	470402	470596	+	conserved hypothetical protein		gene	gene519	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0535
BAA_0536	BAA_0536		BAA_0536	470597	471166	+	putative prophage LambdaBa04%2C major tail protein	identified by match to protein family HMM TIGR01603	gene	gene520	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0536
BAA_0537	BAA_0537		BAA_0537	471171	471533	+	conserved hypothetical protein		gene	gene521	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0537
BAA_0538	BAA_0538		BAA_0538	471644	471757	+	conserved hypothetical protein		gene	gene522	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0538
BAA_0539	BAA_0539		BAA_0539	471775	475710	+	putative prophage LambdaBa04%2C tape measure protein		gene	gene523	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0539
BAA_0540	BAA_0540		BAA_0540	475707	476516	+	conserved hypothetical protein	identified by match to protein family HMM TIGR01633	gene	gene524	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0540
BAA_0541	BAA_0541		BAA_0541	476531	480109	+	hypothetical protein	identified by glimmer%3B putative	gene	gene525	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0541
BAA_0542	BAA_0542		BAA_0542	480175	480336	+	hypothetical protein	identified by glimmer%3B putative	gene	gene526	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0542
BAA_0543	BAA_0543		BAA_0543	480405	482039	+	phage minor structural protein	identified by match to protein family HMM TIGR01665	gene	gene527	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0543
BAA_0544	BAA_0544		BAA_0544	482057	482536	+	conserved domain protein		gene	gene528	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0544
BAA_0545	BAA_0545		BAA_0545	482631	482870	+	conserved hypothetical protein		gene	gene529	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0545
BAA_0546	BAA_0546		BAA_0546	482943	483086	+	hypothetical protein	identified by glimmer%3B putative	gene	gene530	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0546
BAA_0547	BAA_0547		BAA_0547	483086	483883	+	putative prophage LambdaBa04%2C glycosyl hydrolase%2C family 25	identified by match to protein family HMM PF01183	gene	gene531	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0547
BAA_0548	BAA_0548		BAA_0548	483937	484272	-	hypothetical protein	identified by glimmer%3B putative	gene	gene532	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0548
BAA_0549	BAA_0549	truA2	truA2	484652	485389	+	tRNA pseudouridine synthase A	identified by match to protein family HMM PF01416%3B match to protein family HMM TIGR00071	gene	gene533	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0549
BAA_0550	BAA_0550		BAA_0550	485440	485643	-	hypothetical protein	identified by glimmer%3B putative	gene	gene534	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0550
BAA_0551	BAA_0551	rocR1	rocR1	485727	487130	-	arginine utilization regulatory protein RocR	identified by match to protein family HMM PF00158%3B match to protein family HMM PF02954%3B match to protein family HMM PF07728	gene	gene535	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0551
BAA_0552	BAA_0552		BAA_0552	487404	487658	+	conserved hypothetical protein	identified by match to protein family HMM PF00364	gene	gene536	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0552
BAA_0553	BAA_0553		BAA_0553	487763	489184	+	amino acid permease family protein	identified by match to protein family HMM PF00324	gene	gene537	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0553
BAA_0554	BAA_0554		BAA_0554	489280	490560	+	putative acetylornitine deacetylase	identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01910	gene	gene538	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0554
BAA_0555	BAA_0555		BAA_0555	490655	491308	-	DNA-binding protein	identified by match to protein family HMM PF01381%3B match to protein family HMM PF06803	gene	gene539	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0555
BAA_0556	BAA_0556		BAA_0556	491438	492049	+	conserved hypothetical protein	identified by match to protein family HMM TIGR02840	gene	gene540	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0556
BAA_0557	BAA_0557		BAA_0557	492164	492322	+		hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by glimmer%3B putative	pseudogene	gene541	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0557
BAA_0558	BAA_0558		BAA_0558	492345	492686	-	conserved hypothetical protein		gene	gene542	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0558
BAA_0559	BAA_0559	glsA1	glsA1	492862	493791	-	glutaminase A	identified by match to protein family HMM PF04960	gene	gene543	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0559
BAA_0560	BAA_0560		BAA_0560	493861	493974	+	hypothetical protein	identified by glimmer%3B putative	gene	gene544	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0560
BAA_0561	BAA_0561		BAA_0561	494098	495609	+	putative PTS system%2C N-acetylglucosamine-specific IIBC component	identified by match to protein family HMM PF00367%3B match to protein family HMM PF02378%3B match to protein family HMM TIGR00826%3B match to protein family HMM TIGR01998	gene	gene545	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0561
BAA_0562	BAA_0562		BAA_0562	495864	497102	+	putative penicillin-binding protein	identified by match to protein family HMM PF00144	gene	gene546	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0562
BAA_0563	BAA_0563		BAA_0563	497256	497657	+	hypothetical protein	identified by glimmer%3B putative	gene	gene547	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0563
BAA_0564	BAA_0564		BAA_0564	497674	497868	+	conserved hypothetical protein		gene	gene548	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0564
BAA_0565	BAA_0565		BAA_0565	497849	499429	+	glycosyl transferase%2C group 2 family	identified by match to protein family HMM PF00535	gene	gene549	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0565
BAA_0566	BAA_0566		BAA_0566	499419	499619	+		putative polysaccharide biosynthesis protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene550	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0566
BAA_0567	BAA_0567		BAA_0567	499985	500662	+	nucleotide sugar dehydrogenase	identified by match to protein family HMM PF00984%3B match to protein family HMM PF03720%3B match to protein family HMM TIGR03026	gene	gene551	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0567
BAA_0568	BAA_0568		BAA_0568	500659	501624	+	NAD-dependent epimerase/dehydratase family protein	identified by match to protein family HMM PF00106%3B match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF04321%3B match to protein family HMM PF07993	gene	gene552	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0568
BAA_0569	BAA_0569		BAA_0569	501617	503161	+	glycosyl transferase%2C group 2 family	identified by match to protein family HMM PF00535	gene	gene553	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0569
BAA_0570	BAA_0570	pfl	pfl	503501	505750	+	formate acetyltransferase	identified by match to protein family HMM PF01228%3B match to protein family HMM PF02901%3B match to protein family HMM TIGR01255	gene	gene554	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0570
BAA_0571	BAA_0571	pflA	pflA	505820	506551	+	pyruvate formate-lyase-activating enzyme	identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR02493	gene	gene555	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0571
BAA_0572	BAA_0572		BAA_0572	506964	508130	+	conserved hypothetical protein	identified by match to protein family HMM PF04101%3B match to protein family HMM PF06925	gene	gene556	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0572
BAA_0573	BAA_0573		BAA_0573	508495	508614	-	conserved hypothetical protein		gene	gene557	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0573
BAA_0574	BAA_0574		BAA_0574	508725	509282	-	conserved hypothetical protein		gene	gene558	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0574
BAA_0575	BAA_0575		BAA_0575	509524	510654	-	chlorohydrolase family protein	identified by match to protein family HMM PF01979%3B match to protein family HMM PF07969	gene	gene559	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0575
BAA_0576	BAA_0576		BAA_0576	510795	511700	-	cell division inhibitor-like protein	identified by match to protein family HMM PF01370%3B match to protein family HMM PF08338%3B match to protein family HMM TIGR01777	gene	gene560	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0576
BAA_0577	BAA_0577		BAA_0577	511782	512594	+	recX domain protein	identified by match to protein family HMM PF02631	gene	gene561	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0577
BAA_0578	BAA_0578		BAA_0578	512604	512921	+	conserved hypothetical protein	identified by match to protein family HMM PF08838	gene	gene562	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0578
BAA_0579	BAA_0579		BAA_0579	512986	513138	-	hypothetical protein	identified by glimmer%3B putative	gene	gene563	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0579
BAA_0580	BAA_0580	sspK	sspK	513182	513340	-	small%2C acid-soluble spore protein K	identified by match to protein family HMM PF08176%3B match to protein family HMM TIGR03091	gene	gene564	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0580
BAA_0581	BAA_0581		BAA_0581	513462	513728	+	conserved hypothetical protein		gene	gene565	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0581
BAA_0582	BAA_0582		BAA_0582	513753	514733	-	yfhP protein	identified by match to protein family HMM PF04307	gene	gene566	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0582
BAA_0583	BAA_0583	mutY	mutY	514883	515980	+	A/G-specific adenine glycosylase	identified by match to protein family HMM PF00633%3B match to protein family HMM PF00730%3B match to protein family HMM TIGR01084	gene	gene567	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0583
BAA_0584	BAA_0584		BAA_0584	516015	516239	-	yfhS protein		gene	gene568	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0584
BAA_0585	BAA_0585		BAA_0585	516636	516764	-	hypothetical protein	identified by glimmer%3B putative	gene	gene570	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0585
BAA_0586	BAA_0586		BAA_0586	516365	516652	+	small acid-soluble spore protein%2C gamma-type	identified by match to protein family HMM PF04259%3B match to protein family HMM TIGR01442	gene	gene569	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0586
BAA_0587	BAA_0587		BAA_0587	517059	517172	-	hypothetical protein	identified by glimmer%3B putative	gene	gene572	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0587
BAA_0588	BAA_0588		BAA_0588	516841	517101	+	conserved hypothetical protein		gene	gene571	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0588
BAA_0589	BAA_0589		BAA_0589	517334	517864	+	conserved hypothetical protein	identified by match to protein family HMM PF04167	gene	gene573	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0589
BAA_0590	BAA_0590		BAA_0590	517919	519679	+	ABC transporter%2C permease/ATP-binding protein	identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664	gene	gene574	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0590
BAA_0591	BAA_0591		BAA_0591	519693	520781	-	putative lipoprotein	identified by match to protein family HMM PF06081	gene	gene575	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0591
BAA_0592	BAA_0592		BAA_0592	521042	525478	-	putative glutamate synthase%2C large subunit	identified by match to protein family HMM PF00310%3B match to protein family HMM PF01493%3B match to protein family HMM PF01645%3B match to protein family HMM PF04898	gene	gene576	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0592
BAA_0593	BAA_0593	hemL1	hemL1	525678	526982	-	glutamate-1-semialdehyde-2%2C1-aminomutase	identified by match to protein family HMM PF00202%3B match to protein family HMM TIGR00713	gene	gene577	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0593
BAA_0594	BAA_0594		BAA_0594	527104	528117	+	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene578	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0594
BAA_0595	BAA_0595		BAA_0595	528110	528901	+	putative ABC transporter%2C permease protein	identified by match to protein family HMM PF06182	gene	gene579	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0595
BAA_0596	BAA_0596		BAA_0596	528906	529691	+	putative ABC transporter%2C permease protein	identified by match to protein family HMM PF06182	gene	gene580	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0596
BAA_0597	BAA_0597		BAA_0597	529764	530168	+	putative potassium channel protein	identified by match to protein family HMM PF07885	gene	gene581	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0597
BAA_0598	BAA_0598	bcP	bcP	530213	530668	+	bacterioferritin comigratory protein	identified by match to protein family HMM PF00578%3B match to protein family HMM PF08534	gene	gene582	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0598
BAA_0599	BAA_0599		BAA_0599	530966	531394	+	transcriptional regulator%2C Fur family	identified by match to protein family HMM PF01475	gene	gene583	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0599
BAA_0600	BAA_0600		BAA_0600	531593	531949	-	conserved hypothetical protein		gene	gene584	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0600
BAA_0601	BAA_0601	rrs_9	rrs_9	532361	533868	+	16S ribosomal RNA		rRNA	gene585	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0601
BAA_0602	BAA_0602		BAA_0602	534064	534495	-		conserved hypothetical protein%3B this region contains one or more premature stops and/or frameshifts	pseudogene	gene587	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0602
BAA_0603	BAA_0603	rrl_9	rrl_9	534040	536947	+	23S ribosomal RNA		rRNA	gene586	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0603
BAA_0604	BAA_0604	rrf_9	rrf_9	537048	537163	+	5S ribosomal RNA		rRNA	gene588	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0604
BAA_0605	BAA_0605		BAA_0605	537171	537247	+	tRNA-Asn		tRNA	gene589	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0605
BAA_0606	BAA_0606		BAA_0606	537248	537341	+	tRNA-Ser		tRNA	gene590	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0606
BAA_0607	BAA_0607		BAA_0607	537357	537433	+	tRNA-Glu		tRNA	gene591	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0607
BAA_0608	BAA_0608		BAA_0608	537437	537514	+	tRNA-Val		tRNA	gene592	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0608
BAA_0610	BAA_0610		BAA_0610	537537	537615	+	tRNA-Met		tRNA	gene593	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0610
BAA_0611	BAA_0611		BAA_0611	537617	537694	+	tRNA-Asp		tRNA	gene594	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0611
BAA_0612	BAA_0612		BAA_0612	537703	537778	+	tRNA-Phe		tRNA	gene595	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0612
BAA_0613	BAA_0613		BAA_0613	537797	537872	+	tRNA-Thr		tRNA	gene596	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0613
BAA_0614	BAA_0614		BAA_0614	537883	537966	+	tRNA-Tyr		tRNA	gene597	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0614
BAA_0615	BAA_0615		BAA_0615	537973	538048	+	tRNA-Trp		tRNA	gene598	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0615
BAA_0616	BAA_0616		BAA_0616	538066	538143	+	tRNA-His		tRNA	gene599	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0616
BAA_0617	BAA_0617		BAA_0617	538206	538280	+	tRNA-Gln		tRNA	gene600	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0617
BAA_0618	BAA_0618		BAA_0618	538286	538360	+	tRNA-Gly		tRNA	gene601	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0618
BAA_0619	BAA_0619		BAA_0619	538375	538448	+	tRNA-Cys		tRNA	gene602	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0619
BAA_0620	BAA_0620		BAA_0620	538455	538541	+	tRNA-Leu		tRNA	gene603	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0620
BAA_0621	BAA_0621		BAA_0621	538748	539068	-	conserved hypothetical protein		gene	gene604	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0621
BAA_0622	BAA_0622		BAA_0622	539421	540140	+	conserved hypothetical protein TIGR01033	identified by match to protein family HMM PF01709%3B match to protein family HMM TIGR01033	gene	gene605	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0622
BAA_0623	BAA_0623		BAA_0623	540291	540752	+	MutT/NUDIX family protein	identified by match to protein family HMM PF00293	gene	gene606	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0623
BAA_0624	BAA_0624		BAA_0624	541239	542015	+	penicillin-binding domain protein	identified by match to protein family HMM PF00912	gene	gene607	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0624
BAA_0625	BAA_0625		BAA_0625	542203	542856	+	conserved hypothetical protein	identified by match to protein family HMM PF01323	gene	gene608	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0625
BAA_0626	BAA_0626		BAA_0626	542971	543044	+	tRNA-Gly		tRNA	gene609	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0626
BAA_0627	BAA_0627		BAA_0627	543243	544385	+	putative iron-sulfur cluster-binding protein	identified by match to protein family HMM PF00037%3B match to protein family HMM PF03130%3B match to protein family HMM PF08331%3B match to protein family HMM TIGR00276	gene	gene610	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0627
BAA_0628	BAA_0628		BAA_0628	544430	545317	+	conserved hypothetical protein		gene	gene611	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0628
BAA_0629	BAA_0629		BAA_0629	545376	545864	+	RNA methyltransferase%2C TrmH family%2C group 2	identified by match to protein family HMM PF00588%3B match to protein family HMM TIGR00185	gene	gene612	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0629
BAA_0630	BAA_0630		BAA_0630	545992	548061	+	sensory box/GGDEF family protein	identified by match to protein family HMM PF00563%3B match to protein family HMM PF00989%3B match to protein family HMM PF00990%3B match to protein family HMM PF08447%3B match to protein family HMM PF08448%3B match to protein family HMM TIGR00229%3B match to protein family HMM TIGR00254	gene	gene613	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0630
BAA_0631	BAA_0631		BAA_0631	548239	548379	+	hypothetical protein	identified by glimmer%3B putative	gene	gene614	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0631
BAA_0632	BAA_0632		BAA_0632	548453	550348	+	conserved hypothetical protein	identified by match to protein family HMM PF06798%3B match to protein family HMM PF08298	gene	gene615	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0632
BAA_0633	BAA_0633		BAA_0633	550794	551969	+	conserved hypothetical protein	identified by match to protein family HMM PF04285%3B match to protein family HMM TIGR02877	gene	gene616	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0633
BAA_0634	BAA_0634		BAA_0634	552131	555343	+	putative internalin	identified by match to protein family HMM PF00560%3B match to protein family HMM PF00746%3B match to protein family HMM PF05031%3B match to protein family HMM TIGR01167	gene	gene617	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0634
BAA_0635	BAA_0635		BAA_0635	555498	556364	+	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene618	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0635
BAA_0636	BAA_0636	opuD1	opuD1	556468	558018	-	glycine betaine transporter	identified by match to protein family HMM PF02028%3B match to protein family HMM TIGR00842	gene	gene619	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0636
BAA_0637	BAA_0637		BAA_0637	558287	561184	+	putative microbial collagenase	identified by match to protein family HMM PF00801%3B match to protein family HMM PF01752%3B match to protein family HMM PF04151%3B match to protein family HMM PF08453	gene	gene620	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0637
BAA_0638	BAA_0638		BAA_0638	561431	561979	+	conserved hypothetical protein	identified by match to protein family HMM PF01957	gene	gene621	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0638
BAA_0639	BAA_0639		BAA_0639	561992	563572	+	SPFH domain/band 7 family protein	identified by match to protein family HMM PF01145	gene	gene622	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0639
BAA_0640	BAA_0640		BAA_0640	563809	565785	+	methyl-accepting chemotaxis protein	identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672%3B match to protein family HMM PF02743	gene	gene623	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0640
BAA_0641	BAA_0641		BAA_0641	565943	567547	+	sensor histidine kinase	identified by match to protein family HMM PF02518	gene	gene624	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0641
BAA_0642	BAA_0642		BAA_0642	567547	567930	+		response regulator%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00072	pseudogene	gene625	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0642
BAA_0643	BAA_0643		BAA_0643	567921	568238	+		transcriptional regulatory protein CitT%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene626	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0643
BAA_0644	BAA_0644		BAA_0644	568282	569586	-	citrate transporter%2C CitM family	identified by match to protein family HMM PF03600%3B match to protein family HMM PF03606%3B match to protein family HMM PF06808%3B match to protein family HMM TIGR00784	gene	gene627	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0644
BAA_0645	BAA_0645		BAA_0645	569838	570092	+	conserved hypothetical protein		gene	gene628	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0645
BAA_0646	BAA_0646		BAA_0646	570227	570730	+	putative lipoprotein		gene	gene629	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0646
BAA_0647	BAA_0647		BAA_0647	571020	571889	+	ankyrin repeat domain protein	identified by match to protein family HMM PF00023	gene	gene630	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0647
BAA_0648	BAA_0648		BAA_0648	572448	573014	+	putative glycerol uptake operon antiterminator regulatory protein	identified by match to protein family HMM PF04309	gene	gene631	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0648
BAA_0649	BAA_0649		BAA_0649	573011	574108	+	putative glycerol-3-phosphate ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005%3B match to protein family HMM PF08402	gene	gene632	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0649
BAA_0650	BAA_0650		BAA_0650	574108	575040	+	putative glycerol-3-phosphate ABC transporter%2C permease protein	identified by match to protein family HMM PF00528	gene	gene633	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0650
BAA_0651	BAA_0651		BAA_0651	575037	575858	+	putative glycerol-3-phosphate ABC transporter%2C permease protein	identified by match to protein family HMM PF00528	gene	gene634	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0651
BAA_0652	BAA_0652		BAA_0652	575880	577256	+	putative glycerol-3-phosphate ABC transporter%2C glycerol-3-phosphate-binding protein	identified by match to protein family HMM PF01547	gene	gene635	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0652
BAA_0653	BAA_0653		BAA_0653	577672	578376	+	putative serine/threonine phosphatase	identified by match to protein family HMM PF00149	gene	gene636	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0653
BAA_0654	BAA_0654		BAA_0654	578526	579197	+	DNA-binding response regulator	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486	gene	gene637	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0654
BAA_0655	BAA_0655		BAA_0655	579194	580444	+	sensor histidine kinase	identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518	gene	gene638	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0655
BAA_0656	BAA_0656		BAA_0656	580651	581472	+	hypothetical protein	identified by glimmer%3B putative	gene	gene639	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0656
BAA_0657	BAA_0657		BAA_0657	581516	582232	+	conserved hypothetical protein		gene	gene640	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0657
BAA_0658	BAA_0658		BAA_0658	582486	584468	+	methyl-accepting chemotaxis protein	identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672%3B match to protein family HMM PF02743	gene	gene641	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0658
BAA_0659	BAA_0659		BAA_0659	584547	586151	+	sensory box histidine kinase	identified by match to protein family HMM PF00989%3B match to protein family HMM PF02518	gene	gene642	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0659
BAA_0660	BAA_0660		BAA_0660	586148	586855	+	response regulator	identified by match to protein family HMM PF00072	gene	gene643	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0660
BAA_0661	BAA_0661		BAA_0661	586978	588324	+	citrate cation symporter family	identified by match to protein family HMM PF03390	gene	gene644	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0661
BAA_0662	BAA_0662		BAA_0662	588384	589583	+	putative malate dehydrogenase	identified by match to protein family HMM PF00390%3B match to protein family HMM PF03949	gene	gene645	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0662
BAA_0663	BAA_0663		BAA_0663	589879	590403	-	putative lipoprotein		gene	gene646	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0663
BAA_0664	BAA_0664		BAA_0664	590519	591445	-	transporter%2C EamA family	identified by match to protein family HMM PF00892	gene	gene647	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0664
BAA_0665	BAA_0665		BAA_0665	591566	592966	+	transcriptional regulator%2C GntR family	identified by match to protein family HMM PF00155%3B match to protein family HMM PF00392	gene	gene648	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0665
BAA_0666	BAA_0666		BAA_0666	593000	593512	-	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene649	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0666
BAA_0667	BAA_0667		BAA_0667	593659	595122	-	sensor histidine kinase	identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518	gene	gene650	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0667
BAA_0668	BAA_0668		BAA_0668	595188	595859	-	DNA-binding response regulator	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486	gene	gene651	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0668
BAA_0669	BAA_0669		BAA_0669	596189	596311	+	conserved hypothetical protein		gene	gene652	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0669
BAA_0670	BAA_0670		BAA_0670	596693	597199	-	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene653	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0670
BAA_0671	BAA_0671	fdhD1	fdhD1	597428	598234	-	formate dehydrogenase accessory protein FdhD	identified by match to protein family HMM PF02634%3B match to protein family HMM TIGR00129	gene	gene654	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0671
BAA_0672	BAA_0672		BAA_0672	598538	601474	+	molybdopterin oxidoreductase family protein	identified by match to protein family HMM PF00037%3B match to protein family HMM PF00111%3B match to protein family HMM PF00384%3B match to protein family HMM PF01568%3B match to protein family HMM PF04879%3B match to protein family HMM TIGR01591	gene	gene655	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0672
BAA_0673	BAA_0673		BAA_0673	601487	601612	+		conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene656	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0673
BAA_0674	BAA_0674		BAA_0674	601625	601969	+		conserved protein YrhD%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF07849	pseudogene	gene657	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0674
BAA_0675	BAA_0675		BAA_0675	602126	603997	+	glycerophosphoryl diester phosphodiesterase family protein	identified by match to protein family HMM PF03009	gene	gene658	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0675
BAA_0676	BAA_0676	ald1	ald1	604365	605498	+	alanine dehydrogenase	identified by match to protein family HMM PF01262%3B match to protein family HMM PF01488%3B match to protein family HMM PF05222%3B match to protein family HMM TIGR00518	gene	gene659	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0676
BAA_0677	BAA_0677		BAA_0677	605602	607017	+	amino acid permease family protein	identified by match to protein family HMM PF00324%3B match to protein family HMM PF03845	gene	gene660	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0677
BAA_0678	BAA_0678		BAA_0678	607284	607661	+	transcriptional regulator%2C ArsR family	identified by match to protein family HMM PF01022	gene	gene661	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0678
BAA_0679	BAA_0679		BAA_0679	607686	610052	+	heavy metal-transporting ATPase	identified by match to protein family HMM PF00122%3B match to protein family HMM PF00403%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494%3B match to protein family HMM TIGR01512%3B match to protein family HMM TIGR01525	gene	gene662	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0679
BAA_0680	BAA_0680		BAA_0680	610256	611719	-	putative nicotinate phosphoribosyltransferase	identified by match to protein family HMM PF04095%3B match to protein family HMM TIGR01513	gene	gene663	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0680
BAA_0681	BAA_0681		BAA_0681	611920	613188	+	transcriptional regulator/TPR domain protein	identified by match to protein family HMM PF00515%3B match to protein family HMM PF01381%3B match to protein family HMM PF07719	gene	gene664	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0681
BAA_0682	BAA_0682		BAA_0682	613191	613322	+	hypothetical protein	identified by glimmer%3B putative	gene	gene665	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0682
BAA_0683	BAA_0683		BAA_0683	613489	615189	+	neutral protease Npr599	identified by match to protein family HMM PF01447%3B match to protein family HMM PF02868%3B match to protein family HMM PF03413%3B match to protein family HMM PF07504	gene	gene666	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0683
BAA_0684	BAA_0684		BAA_0684	615252	615800	-	putative membrane protein	identified by match to protein family HMM PF09335	gene	gene667	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0684
BAA_0685	BAA_0685		BAA_0685	616179	616697	+	putative lipoprotein		gene	gene668	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0685
BAA_0686	BAA_0686		BAA_0686	616713	616985	+	hypothetical protein	identified by glimmer%3B putative	gene	gene669	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0686
BAA_0687	BAA_0687		BAA_0687	617034	618296	-	conserved hypothetical protein	identified by match to protein family HMM PF04294	gene	gene670	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0687
BAA_0688	BAA_0688		BAA_0688	618531	619547	-	transcription antiterminator%2C LytR family	identified by match to protein family HMM PF03816%3B match to protein family HMM TIGR00350	gene	gene671	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0688
BAA_0689	BAA_0689		BAA_0689	619808	620986	-	nucleoside transporter%2C NupC family	identified by match to protein family HMM PF01773%3B match to protein family HMM PF07662%3B match to protein family HMM PF07670%3B match to protein family HMM TIGR00804	gene	gene672	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0689
BAA_0690	BAA_0690		BAA_0690	621078	621464	+	glyoxylase family protein	identified by match to protein family HMM PF00903	gene	gene673	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0690
BAA_0691	BAA_0691		BAA_0691	621572	622657	+	CBS domain protein	identified by match to protein family HMM PF00571%3B match to protein family HMM PF01595	gene	gene674	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0691
BAA_0692	BAA_0692	aspA1	aspA1	622741	624174	+	aspartate ammonia-lyase	identified by match to protein family HMM PF00206%3B match to protein family HMM TIGR00839	gene	gene675	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0692
BAA_0693	BAA_0693	lldP1	lldP1	624214	625833	-	L-lactate permease	identified by match to protein family HMM PF02652%3B match to protein family HMM TIGR00795	gene	gene676	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0693
BAA_0694	BAA_0694		BAA_0694	626670	626957	+	transcriptional regulator%2C ArsR family	identified by match to protein family HMM PF01022	gene	gene677	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0694
BAA_0695	BAA_0695		BAA_0695	627072	627251	+	small acid-soluble spore protein%2C H-type	identified by match to protein family HMM PF08141%3B match to protein family HMM TIGR02861	gene	gene678	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0695
BAA_0696	BAA_0696		BAA_0696	627292	628650	-	proton/peptide symporter family protein	identified by match to protein family HMM PF00854%3B match to protein family HMM PF07690%3B match to protein family HMM TIGR00924	gene	gene679	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0696
BAA_0697	BAA_0697		BAA_0697	629032	629997	-	iron compound ABC transporter%2C iron compound-binding protein	identified by match to protein family HMM PF01497	gene	gene680	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0697
BAA_0698	BAA_0698		BAA_0698	630170	631174	+	iron compound ABC transporter%2C permease protein	identified by match to protein family HMM PF01032	gene	gene681	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0698
BAA_0699	BAA_0699		BAA_0699	631171	632229	+	iron compound ABC transporter%2C permease protein	identified by match to protein family HMM PF01032	gene	gene682	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0699
BAA_0700	BAA_0700		BAA_0700	632242	633063	+	iron compound ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene683	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0700
BAA_0701	BAA_0701		BAA_0701	633095	633826	-	conserved hypothetical protein	identified by match to protein family HMM PF08241%3B match to protein family HMM PF08242	gene	gene684	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0701
BAA_0702	BAA_0702		BAA_0702	634039	635229	+	putative 8-amino-7-oxononanoate synthase	identified by match to protein family HMM PF00155%3B match to protein family HMM TIGR01825	gene	gene685	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0702
BAA_0703	BAA_0703		BAA_0703	635274	636227	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF07993	pseudogene	gene686	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0703
BAA_0704	BAA_0704		BAA_0704	636293	636715	+	MutT/NUDIX family protein	identified by match to protein family HMM PF00293	gene	gene687	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0704
BAA_0705	BAA_0705		BAA_0705	636755	638635	-	conserved hypothetical protein		gene	gene688	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0705
BAA_0706	BAA_0706		BAA_0706	638639	639532	-	putative norQ protein	identified by match to protein family HMM PF07726%3B match to protein family HMM PF07728	gene	gene689	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0706
BAA_0707	BAA_0707	cls1	cls1	639660	641189	-	cardiolipin synthetase	identified by match to protein family HMM PF00614	gene	gene690	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0707
BAA_0708	BAA_0708		BAA_0708	641373	641609	+	hypothetical protein	identified by glimmer%3B putative	gene	gene691	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0708
BAA_0709	BAA_0709		BAA_0709	641640	641978	+	hypothetical protein	identified by glimmer%3B putative	gene	gene692	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0709
BAA_0710	BAA_0710		BAA_0710	642337	644040	+	sensory box/GGDEF family protein	identified by match to protein family HMM PF00563%3B match to protein family HMM PF00989%3B match to protein family HMM PF00990%3B match to protein family HMM PF08447%3B match to protein family HMM TIGR00229%3B match to protein family HMM TIGR00254	gene	gene693	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0710
BAA_0711	BAA_0711		BAA_0711	644071	645468	-	amino acid permease family protein	identified by match to protein family HMM PF00324%3B match to protein family HMM PF03222	gene	gene694	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0711
BAA_0712	BAA_0712	treR	treR	645920	646630	+	trehalose operon repressor	identified by match to protein family HMM PF00392%3B match to protein family HMM PF07702%3B match to protein family HMM TIGR02404	gene	gene695	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0712
BAA_0713	BAA_0713	treB	treB	646768	648195	+	PTS system%2C trehalose-specific IIBC component	identified by match to protein family HMM PF00367%3B match to protein family HMM PF02378%3B match to protein family HMM TIGR00826%3B match to protein family HMM TIGR01992	gene	gene696	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0713
BAA_0714	BAA_0714	treC	treC	648209	649870	+	alpha%2Calpha-phosphotrehalase	identified by match to protein family HMM PF00128%3B match to protein family HMM TIGR02403	gene	gene697	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0714
BAA_0715	BAA_0715	gerKC	gerKC	649902	651026	-	spore germination protein GerKC	identified by match to protein family HMM PF05504%3B match to protein family HMM TIGR02887	gene	gene698	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0715
BAA_0716	BAA_0716	gerKB	gerKB	651007	652113	-	spore germination protein GerKB	identified by match to protein family HMM PF03845%3B match to protein family HMM TIGR00912	gene	gene699	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0716
BAA_0717	BAA_0717	gerKA	gerKA	652094	653596	-	spore germination protein GerKA	identified by match to protein family HMM PF03323	gene	gene700	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0717
BAA_0718	BAA_0718		BAA_0718	653746	654432	+	CAAX amino terminal protease family protein	identified by match to protein family HMM PF02517	gene	gene701	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0718
BAA_0719	BAA_0719		BAA_0719	654456	655427	+	conserved hypothetical protein	identified by match to protein family HMM PF01636	gene	gene702	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0719
BAA_0720	BAA_0720		BAA_0720	655555	657015	+	sodium/alanine symporter family protein	identified by match to protein family HMM PF01235%3B match to protein family HMM TIGR00835	gene	gene703	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0720
BAA_0721	BAA_0721		BAA_0721	657092	657880	+	amino acid ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene704	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0721
BAA_0722	BAA_0722		BAA_0722	657893	658723	+	amino acid ABC transporter%2C amino acid-binding protein	identified by match to protein family HMM PF00497	gene	gene705	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0722
BAA_0723	BAA_0723		BAA_0723	658786	659442	+	amino acid ABC transporter%2C permease protein	identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01726	gene	gene706	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0723
BAA_0724	BAA_0724		BAA_0724	659443	660087	+	amino acid ABC transporter%2C permease protein	identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01726	gene	gene707	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0724
BAA_0725	BAA_0725		BAA_0725	660292	661719	+	amino acid ABC transporter%2C permease protein	identified by match to protein family HMM PF00324	gene	gene708	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0725
BAA_0726	BAA_0726		BAA_0726	661694	662071	+	conserved hypothetical protein	identified by match to protein family HMM PF02566	gene	gene709	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0726
BAA_0727	BAA_0727		BAA_0727	662133	662567	+	HIT family protein	identified by match to protein family HMM PF01230	gene	gene710	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0727
BAA_0728	BAA_0728		BAA_0728	662744	663301	+	RNA polymerase sigma-70 factor%2C ECF subfamily	identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937	gene	gene711	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0728
BAA_0729	BAA_0729		BAA_0729	663267	664700	+	hypothetical protein	identified by glimmer%3B putative	gene	gene712	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0729
BAA_0730	BAA_0730		BAA_0730	664734	665687	-	conserved hypothetical protein	identified by match to protein family HMM PF08279	gene	gene713	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0730
BAA_0731	BAA_0731		BAA_0731	665794	666315	+	dihydrofolate reductase family protein	identified by match to protein family HMM PF01872	gene	gene714	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0731
BAA_0732	BAA_0732		BAA_0732	666329	667720	-	sensor histidine kinase	identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518	gene	gene715	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0732
BAA_0733	BAA_0733		BAA_0733	667732	668409	-	DNA-binding response regulator	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486	gene	gene716	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0733
BAA_0734	BAA_0734		BAA_0734	668583	668822	+		putative lipoprotein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene717	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0734
BAA_0735	BAA_0735		BAA_0735	668833	669834	+		transcriptional regulator%2C ArsR family protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene718	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0735
BAA_0736	BAA_0736		BAA_0736	669992	671443	+	sulfate permease family protein	identified by match to protein family HMM PF00860%3B match to protein family HMM PF00916	gene	gene719	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0736
BAA_0737	BAA_0737		BAA_0737	671509	671931	+	universal stress protein family protein	identified by match to protein family HMM PF00582	gene	gene720	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0737
BAA_0738	BAA_0738		BAA_0738	672149	672265	+	hypothetical protein	identified by glimmer%3B putative	gene	gene721	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0738
BAA_0739	BAA_0739		BAA_0739	672369	674150	-	oligopeptide ABC transporter%2C oligopeptide-binding protein	identified by match to protein family HMM PF00496	gene	gene722	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0739
BAA_0740	BAA_0740		BAA_0740	674165	675070	-	oligopeptide ABC transporter%2C permease protein	identified by match to protein family HMM PF00528	gene	gene723	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0740
BAA_0741	BAA_0741		BAA_0741	675089	676057	-	oligopeptide ABC transporter%2C permease protein	identified by match to protein family HMM PF00528	gene	gene724	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0741
BAA_0742	BAA_0742		BAA_0742	676072	676998	-	oligopeptide ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352	gene	gene725	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0742
BAA_0743	BAA_0743		BAA_0743	676985	678004	-	oligopeptide ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727	gene	gene726	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0743
BAA_0744	BAA_0744	glpT	glpT	678289	679638	-	glycerol-3-phosphate transporter	identified by match to protein family HMM PF07690%3B match to protein family HMM TIGR00712%3B match to protein family HMM TIGR00881	gene	gene727	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0744
BAA_0745	BAA_0745		BAA_0745	679911	680369	+	transcriptional regulator%2C MarR family	identified by match to protein family HMM PF01047	gene	gene728	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0745
BAA_0746	BAA_0746		BAA_0746	680389	681819	+		putative multidrug resistance protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF07690%3B match to protein family HMM TIGR00711	pseudogene	gene729	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0746
BAA_0747	BAA_0747		BAA_0747	681816	681989	+		drug resistance transporter%2C EmrB/QacA family%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene730	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0747
BAA_0748	BAA_0748	rbsR	rbsR	682127	683098	+	ribose operon repressor	identified by match to protein family HMM PF00356%3B match to protein family HMM PF00532	gene	gene731	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0748
BAA_0749	BAA_0749	rbsK	rbsK	683112	684008	+	ribokinase	identified by match to protein family HMM PF00294%3B match to protein family HMM TIGR02152	gene	gene732	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0749
BAA_0750	BAA_0750	rbsD	rbsD	684005	684400	+	ribose ABC transporter protein	identified by match to protein family HMM PF05025	gene	gene733	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0750
BAA_0751	BAA_0751	rbsA	rbsA	684413	685903	+	ribose ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene734	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0751
BAA_0752	BAA_0752	rbsC	rbsC	685906	686841	+	ribose ABC transporter%2C permease protein	identified by match to protein family HMM PF02653	gene	gene735	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0752
BAA_0753	BAA_0753	rbsB	rbsB	686856	687782	+	ribose ABC transporter%2C ribose-binding protein	identified by match to protein family HMM PF00532	gene	gene736	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0753
BAA_0754	BAA_0754		BAA_0754	687817	688464	+	putative transaldolase	identified by match to protein family HMM PF00923%3B match to protein family HMM TIGR00875	gene	gene737	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0754
BAA_0755	BAA_0755	inhA	inhA	688781	691180	+	immune inhibitor A metalloprotease	identified by match to protein family HMM PF05547%3B match to protein family HMM TIGR03296	gene	gene738	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0755
BAA_0756	BAA_0756		BAA_0756	691499	691840	+	conserved hypothetical protein		gene	gene739	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0756
BAA_0757	BAA_0757		BAA_0757	691878	693050	-	putative multidrug resistance protein	identified by match to protein family HMM PF00083%3B match to protein family HMM PF07690	gene	gene740	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0757
BAA_0758	BAA_0758		BAA_0758	693276	694328	+	oxidoreductase%2C zinc-binding dehydrogenase family	identified by match to protein family HMM PF00107%3B match to protein family HMM PF08240	gene	gene741	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0758
BAA_0759	BAA_0759		BAA_0759	694447	694791	+	conserved hypothetical protein	identified by match to protein family HMM PF07885	gene	gene742	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0759
BAA_0760	BAA_0760	plC	plC	695045	695896	+	phospholipase C	identified by match to protein family HMM PF00882	gene	gene743	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0760
BAA_0761	BAA_0761	sph	sph	695970	696971	+	sphingomyelin phosphodiesterase C	identified by match to protein family HMM PF03372%3B match to protein family HMM TIGR03395	gene	gene744	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0761
BAA_0762	BAA_0762		BAA_0762	697079	698251	+	conserved hypothetical protein		gene	gene745	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0762
BAA_0763	BAA_0763		BAA_0763	698239	699552	+	oxidoreductase%2C FAD-binding	identified by match to protein family HMM PF01565%3B match to protein family HMM PF04030%3B match to protein family HMM TIGR01679	gene	gene746	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0763
BAA_0764	BAA_0764		BAA_0764	699560	700711	-	putative membrane protein	identified by match to protein family HMM PF04892	gene	gene747	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0764
BAA_0765	BAA_0765		BAA_0765	700884	701087	+	hypothetical protein	identified by glimmer%3B putative	gene	gene748	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0765
BAA_0766	BAA_0766		BAA_0766	701145	701957	-	undecaprenol kinase family protein	identified by match to protein family HMM PF02673	gene	gene749	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0766
BAA_0767	BAA_0767		BAA_0767	702090	703034	-	methyl-accepting chemotaxis protein	identified by match to protein family HMM PF00015	gene	gene750	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0767
BAA_0768	BAA_0768		BAA_0768	703255	704517	+	conserved hypothetical protein	identified by match to protein family HMM PF06725	gene	gene751	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0768
BAA_0769	BAA_0769		BAA_0769	704630	704848	+	DNA-binding protein	identified by match to protein family HMM PF01381	gene	gene752	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0769
BAA_0770	BAA_0770		BAA_0770	704841	705314	+	conserved hypothetical protein		gene	gene753	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0770
BAA_0771	BAA_0771		BAA_0771	705431	706063	+	LPXTG-site transpeptidase family protein	identified by match to protein family HMM PF04203%3B match to protein family HMM TIGR01076	gene	gene754	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0771
BAA_0772	BAA_0772		BAA_0772	706092	707477	-	proton/peptide symporter family protein	identified by match to protein family HMM PF00854%3B match to protein family HMM PF07690%3B match to protein family HMM TIGR00924	gene	gene755	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0772
BAA_0773	BAA_0773	brnQ1	brnQ1	707730	709031	+	branched-chain amino acid transport system II carrier protein	identified by match to protein family HMM PF05525%3B match to protein family HMM TIGR00796	gene	gene756	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0773
BAA_0774	BAA_0774		BAA_0774	709167	710888	+	putative membrane protein		gene	gene757	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0774
BAA_0775	BAA_0775		BAA_0775	710924	712471	-	conserved hypothetical protein		gene	gene758	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0775
BAA_0776	BAA_0776		BAA_0776	712653	714044	-	amino acid permease family protein	identified by match to protein family HMM PF00324	gene	gene759	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0776
BAA_0777	BAA_0777		BAA_0777	714325	715617	+	xanthine/uracil permease family protein	identified by match to protein family HMM PF00860%3B match to protein family HMM PF00916	gene	gene760	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0777
BAA_0778	BAA_0778		BAA_0778	715749	715949	+	DNA-binding protein	identified by match to protein family HMM PF01381	gene	gene761	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0778
BAA_0779	BAA_0779		BAA_0779	715954	716382	+	hypothetical protein	identified by glimmer%3B putative	gene	gene762	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0779
BAA_0780	BAA_0780		BAA_0780	716420	716857	-	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene763	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0780
BAA_0781	BAA_0781		BAA_0781	716872	717093	-	hypothetical protein	identified by glimmer%3B putative	gene	gene764	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0781
BAA_0782	BAA_0782		BAA_0782	717183	719012	-	sodium/hydrogen exchanger family protein/TrkA domain protein	identified by match to protein family HMM PF00999%3B match to protein family HMM PF02080%3B match to protein family HMM PF02254	gene	gene765	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0782
BAA_0783	BAA_0783	qoxD	qoxD	719234	719545	-	cytochrome aa3 quinol oxidase%2C subunit IV	identified by match to protein family HMM PF03626%3B match to protein family HMM TIGR02901	gene	gene766	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0783
BAA_0784	BAA_0784	qoxC	qoxC	719546	720148	-	cytochrome aa3 quinol oxidase%2C subunit III	identified by match to protein family HMM PF00510%3B match to protein family HMM TIGR02897	gene	gene767	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0784
BAA_0785	BAA_0785	qoxB	qoxB	720162	722096	-	cytochrome aa3 quinol oxidase%2C subunit I	identified by match to protein family HMM PF00115%3B match to protein family HMM TIGR02882	gene	gene768	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0785
BAA_0786	BAA_0786	qoxA	qoxA	722130	723005	-	cytochrome aa3 quinol oxidase%2C subunit II	identified by match to protein family HMM PF02790%3B match to protein family HMM TIGR01432	gene	gene769	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0786
BAA_0787	BAA_0787		BAA_0787	723541	724251	+	conserved hypothetical protein		gene	gene770	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0787
BAA_0788	BAA_0788		BAA_0788	724384	725559	+	N-acyl-L-amino acid amidohydrolase	identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01891	gene	gene771	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0788
BAA_0789	BAA_0789		BAA_0789	725561	725758	+	conserved hypothetical protein		gene	gene772	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0789
BAA_0790	BAA_0790		BAA_0790	725755	727227	+	sodium/solute symporter family protein	identified by match to protein family HMM PF00474	gene	gene773	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0790
BAA_0791	BAA_0791	gerLA	gerLA	727339	728808	+	spore germination protein GerLA	identified by match to protein family HMM PF03323	gene	gene774	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0791
BAA_0792	BAA_0792	gerLB	gerLB	728809	729933	+	spore germination protein GerLB	identified by match to protein family HMM PF03845%3B match to protein family HMM TIGR00912	gene	gene775	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0792
BAA_0793	BAA_0793	gerLC	gerLC	729941	731083	+	spore germination protein GerLC	identified by match to protein family HMM PF05504%3B match to protein family HMM TIGR02887	gene	gene776	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0793
BAA_0794	BAA_0794		BAA_0794	731095	731232	+	hypothetical protein	identified by glimmer%3B putative	gene	gene777	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0794
BAA_0795	BAA_0795		BAA_0795	731294	732694	-	ferrous iron transport protein B	identified by match to protein family HMM PF02421%3B match to protein family HMM PF07664%3B match to protein family HMM PF07670	gene	gene778	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0795
BAA_0796	BAA_0796		BAA_0796	732672	733394	-	ferrous iron transport protein B%2C N- region	identified by match to protein family HMM PF01926%3B match to protein family HMM TIGR00231	gene	gene779	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0796
BAA_0797	BAA_0797		BAA_0797	733391	733648	-	putative ferrous iron transport protein A	identified by match to protein family HMM PF04023	gene	gene780	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0797
BAA_0798	BAA_0798		BAA_0798	734161	735060	+	putative phosphate ABC transporter%2C phosphate-binding protein	identified by match to protein family HMM PF01547%3B match to protein family HMM TIGR02136	gene	gene781	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0798
BAA_0799	BAA_0799		BAA_0799	735131	736021	+	putative phosphate ABC transporter%2C permease protein	identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR02138	gene	gene782	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0799
BAA_0800	BAA_0800		BAA_0800	736024	736944	+	putative phosphate ABC transporter%2C permease protein	identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR00974	gene	gene783	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0800
BAA_0801	BAA_0801		BAA_0801	737130	737654	+	conserved hypothetical protein		gene	gene784	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0801
BAA_0802	BAA_0802		BAA_0802	737698	740742	-	transporter%2C AcrB/AcrD/AcrF family	identified by match to protein family HMM PF00873	gene	gene785	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0802
BAA_0803	BAA_0803	rrs_10	rrs_10	741463	742971	+	16S ribosomal RNA		rRNA	gene786	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0803
BAA_0804	BAA_0804		BAA_0804	743174	743605	-		conserved hypothetical protein%3B this region contains one or more premature stops and/or frameshifts	pseudogene	gene788	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0804
BAA_0805	BAA_0805	rrl_10	rrl_10	743150	746057	+	23S ribosomal RNA		rRNA	gene787	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0805
BAA_0806	BAA_0806	rrf_10	rrf_10	746159	746274	+	5S ribosomal RNA		rRNA	gene789	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0806
BAA_0807	BAA_0807		BAA_0807	746279	746356	+	tRNA-Val		tRNA	gene790	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0807
BAA_0808	BAA_0808		BAA_0808	746367	746441	+	tRNA-Gln		tRNA	gene791	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0808
BAA_0809	BAA_0809		BAA_0809	746446	746521	+	tRNA-Lys		tRNA	gene792	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0809
BAA_0810	BAA_0810		BAA_0810	746535	746620	+	tRNA-Leu		tRNA	gene793	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0810
BAA_0811	BAA_0811		BAA_0811	746646	746720	+	tRNA-Gly		tRNA	gene794	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0811
BAA_0812	BAA_0812		BAA_0812	746736	746826	+	tRNA-Leu		tRNA	gene795	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0812
BAA_0813	BAA_0813		BAA_0813	746828	746906	+	tRNA-Arg		tRNA	gene796	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0813
BAA_0814	BAA_0814		BAA_0814	746913	746989	+	tRNA-Pro		tRNA	gene797	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0814
BAA_0815	BAA_0815		BAA_0815	747002	747079	+	tRNA-Ala		tRNA	gene798	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0815
BAA_0816	BAA_0816		BAA_0816	747096	747188	+	tRNA-Ser		tRNA	gene799	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0816
BAA_0817	BAA_0817		BAA_0817	747243	747335	+	tRNA-Ser		tRNA	gene800	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0817
BAA_0818	BAA_0818		BAA_0818	747355	747433	+	tRNA-Met		tRNA	gene801	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0818
BAA_0819	BAA_0819		BAA_0819	747436	747513	+	tRNA-Asp		tRNA	gene802	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0819
BAA_0820	BAA_0820		BAA_0820	747520	747597	+	tRNA-Phe		tRNA	gene803	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0820
BAA_0821	BAA_0821		BAA_0821	747605	747682	+	tRNA-Thr		tRNA	gene804	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0821
BAA_0822	BAA_0822		BAA_0822	747684	747759	+	tRNA-Trp		tRNA	gene805	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0822
BAA_0823	BAA_0823		BAA_0823	747765	747843	+	tRNA-Ile		tRNA	gene806	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0823
BAA_0824	BAA_0824		BAA_0824	747850	748002	+	tRNA-Glu	may contain an intron	tRNA	gene807	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0824
BAA_0825	BAA_0825		BAA_0825	748137	748556	+	CBS domain protein	identified by match to protein family HMM PF00571	gene	gene808	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0825
BAA_0826	BAA_0826		BAA_0826	748851	750002	+	hypothetical protein	identified by glimmer%3B putative	gene	gene809	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0826
BAA_0827	BAA_0827		BAA_0827	750061	750216	-	hypothetical protein	identified by glimmer%3B putative	gene	gene810	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0827
BAA_0828	BAA_0828		BAA_0828	750231	750563	-	conserved domain protein		gene	gene811	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0828
BAA_0829	BAA_0829		BAA_0829	750569	751729	-	peptidase%2C M23/M37 family	identified by match to protein family HMM PF01551%3B match to protein family HMM PF08239	gene	gene812	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0829
BAA_0832	BAA_0832		BAA_0832	752360	753055	+	putative transcriptional activator TenA	identified by match to protein family HMM PF03070	gene	gene813	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0832
BAA_0833	BAA_0833		BAA_0833	753024	753773	+	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene814	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0833
BAA_0834	BAA_0834		BAA_0834	753773	754525	+	putative ABC transporter%2C permease protein	identified by match to protein family HMM PF00528	gene	gene815	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0834
BAA_0835	BAA_0835		BAA_0835	754522	755523	+	putative ABC transporter%2C substrate-binding protein	identified by match to protein family HMM PF09084	gene	gene816	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0835
BAA_0836	BAA_0836	tenI	tenI	755534	756154	+	regulatory protein TenI	identified by match to protein family HMM PF02581	gene	gene817	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0836
BAA_0837	BAA_0837	thiO	thiO	756147	757256	+	glycine oxidase ThiO	identified by match to protein family HMM PF01266%3B match to protein family HMM TIGR02352	gene	gene818	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0837
BAA_0838	BAA_0838	thiS	thiS	757272	757475	+	thiamine biosynthesis protein ThiS	identified by match to protein family HMM PF02597%3B match to protein family HMM TIGR01683	gene	gene819	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0838
BAA_0839	BAA_0839	thiG	thiG	757478	758248	+	thiazole biosynthesis protein ThiG	identified by match to protein family HMM PF05690	gene	gene820	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0839
BAA_0840	BAA_0840		BAA_0840	758241	759260	+	hesA/moeB/thiF family protein	identified by match to protein family HMM PF00899%3B match to protein family HMM PF05237%3B match to protein family HMM TIGR02356	gene	gene821	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0840
BAA_0841	BAA_0841	thiD1	thiD1	759276	760088	+	phosphomethylpyrimidine kinase	identified by match to protein family HMM PF08543%3B match to protein family HMM TIGR00097	gene	gene822	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0841
BAA_0843	BAA_0843		BAA_0843	760530	760799	+		hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by glimmer%3B putative	pseudogene	gene823	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0843
BAA_0844	BAA_0844		BAA_0844	760822	761046	+	hypothetical protein	identified by glimmer%3B putative	gene	gene824	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0844
BAA_0845	BAA_0845		BAA_0845	761076	761207	+	hypothetical protein	identified by glimmer%3B putative	gene	gene825	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0845
BAA_0847	BAA_0847	kdpA	kdpA	761754	763421	+	K+-transporting ATPase%2C A subunit	identified by match to protein family HMM PF03814%3B match to protein family HMM TIGR00680	gene	gene826	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0847
BAA_0848	BAA_0848	kdpB	kdpB	763435	765525	+	potassium-transporting ATPase%2C B subunit	identified by match to protein family HMM PF00122%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494%3B match to protein family HMM TIGR01497	gene	gene827	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0848
BAA_0849	BAA_0849	kdpC	kdpC	765542	766123	+	K+-transporting ATPase%2C C subunit	identified by match to protein family HMM PF02669%3B match to protein family HMM TIGR00681	gene	gene828	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0849
BAA_0850	BAA_0850	kdpD	kdpD	766186	767334	+	sensor histidine kinase KdpD	identified by match to protein family HMM PF00582%3B match to protein family HMM PF02702	gene	gene829	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0850
BAA_0851	BAA_0851		BAA_0851	767359	768540	-	major facilitator family transporter	identified by match to protein family HMM PF07690	gene	gene830	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0851
BAA_0852	BAA_0852		BAA_0852	768681	769142	+	transcriptional regulator%2C MarR family	identified by match to protein family HMM PF01047	gene	gene831	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0852
BAA_0853	BAA_0853		BAA_0853	769271	770125	+	phospholipase%2C patatin family	identified by match to protein family HMM PF01734	gene	gene832	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0853
BAA_0854	BAA_0854		BAA_0854	770295	770456	+	hypothetical protein	identified by glimmer%3B putative	gene	gene833	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0854
BAA_0855	BAA_0855		BAA_0855	770554	771855	-	xanthine/uracil permease family protein	identified by match to protein family HMM PF00860%3B match to protein family HMM PF00916	gene	gene834	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0855
BAA_0856	BAA_0856		BAA_0856	772057	772923	+	oxidoreductase%2C short chain dehydrogenase/reductase family	identified by match to protein family HMM PF00106	gene	gene835	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0856
BAA_0857	BAA_0857		BAA_0857	772990	773226	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene836	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0857
BAA_0858	BAA_0858		BAA_0858	773352	773750	+		conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene837	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0858
BAA_0859	BAA_0859		BAA_0859	773855	774106	+		putative membrane protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene838	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0859
BAA_0860	BAA_0860	scrK	scrK	774117	775058	-	fructokinase	identified by match to protein family HMM PF00294	gene	gene839	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0860
BAA_0861	BAA_0861	scrB	scrB	775055	776530	-	beta-fructofuranosidase	identified by match to protein family HMM PF00251%3B match to protein family HMM PF08244%3B match to protein family HMM TIGR01322	gene	gene840	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0861
BAA_0862	BAA_0862	scrA	scrA	776548	777924	-	PTS system%2C sucrose-specific IIBC component	identified by match to protein family HMM PF00367%3B match to protein family HMM PF02378%3B match to protein family HMM TIGR00826%3B match to protein family HMM TIGR01996	gene	gene841	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0862
BAA_0863	BAA_0863	scrR	scrR	778053	779039	-	sucrose operon repressor	identified by match to protein family HMM PF00356%3B match to protein family HMM PF00532	gene	gene842	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0863
BAA_0864	BAA_0864		BAA_0864	779157	779372	-	conserved hypothetical protein	identified by match to protein family HMM PF07561	gene	gene843	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0864
BAA_0865	BAA_0865		BAA_0865	779445	779864	-	putative thioredoxin	identified by match to protein family HMM PF00085	gene	gene844	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0865
BAA_0866	BAA_0866		BAA_0866	779877	780296	-	putative disulfide bond formation protein B	identified by match to protein family HMM PF02600	gene	gene845	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0866
BAA_0867	BAA_0867		BAA_0867	780462	780710	-	conserved hypothetical protein		gene	gene846	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0867
BAA_0868	BAA_0868		BAA_0868	780827	781336	-	putative lipoprotein		gene	gene847	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0868
BAA_0869	BAA_0869		BAA_0869	781382	782002	-		spore germination protein GerYB%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF03845	pseudogene	gene848	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0869
BAA_0870	BAA_0870		BAA_0870	782122	782490	-		spore germination protein B%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene849	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0870
BAA_0871	BAA_0871	gerYC	gerYC	782503	783498	-	spore germination protein GerYC	identified by match to protein family HMM PF05504%3B match to protein family HMM TIGR02887	gene	gene850	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0871
BAA_0872	BAA_0872	gerYA	gerYA	783582	785087	-	spore germination protein GerYA	identified by match to protein family HMM PF03323	gene	gene851	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0872
BAA_0873	BAA_0873		BAA_0873	785212	785457	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene852	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0873
BAA_0874	BAA_0874		BAA_0874	785463	785807	-		group-specific protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene853	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0874
BAA_0875	BAA_0875		BAA_0875	786040	786600	+	nitroreductase family protein	identified by match to protein family HMM PF00881	gene	gene854	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0875
BAA_0876	BAA_0876	spoVR	spoVR	786716	788134	+	stage V sporulation protein R	identified by match to protein family HMM PF04293	gene	gene855	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0876
BAA_0877	BAA_0877		BAA_0877	788127	788264	+	hypothetical protein	identified by glimmer%3B putative	gene	gene856	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0877
BAA_0878	BAA_0878		BAA_0878	788242	789504	+	alkaline ceramidase domain protein		gene	gene857	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0878
BAA_0879	BAA_0879		BAA_0879	789626	790096	-	transcriptional regulator%2C MarR family	identified by match to protein family HMM PF01047	gene	gene858	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0879
BAA_0880	BAA_0880		BAA_0880	790194	790778	+	hypothetical protein	identified by glimmer%3B putative	gene	gene859	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0880
BAA_0881	BAA_0881		BAA_0881	790912	791496	+	hypothetical protein	identified by glimmer%3B putative	gene	gene860	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0881
BAA_0882	BAA_0882		BAA_0882	791705	793369	+	pyridine nucleotide-disulfide oxidoreductase%2C class I	identified by match to protein family HMM PF00070%3B match to protein family HMM PF00581%3B match to protein family HMM PF02852%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR03385	gene	gene861	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0882
BAA_0883	BAA_0883		BAA_0883	793555	793818	+	conserved hypothetical protein	identified by match to protein family HMM PF02583	gene	gene862	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0883
BAA_0884	BAA_0884		BAA_0884	793907	794467	+	rhodanese domain protein	identified by match to protein family HMM PF00581%3B match to protein family HMM PF01206	gene	gene863	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0884
BAA_0885	BAA_0885		BAA_0885	794506	795636	+	metallo-beta-lactamase family protein	identified by match to protein family HMM PF00753	gene	gene864	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0885
BAA_0886	BAA_0886		BAA_0886	795668	795898	+	conserved hypothetical protein	identified by match to protein family HMM PF01206	gene	gene865	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0886
BAA_0887	BAA_0887		BAA_0887	795975	796289	+		rhodanese-like domain protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00581	pseudogene	gene866	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0887
BAA_0888	BAA_0888		BAA_0888	796304	796600	+	rhodanese domain family protein	identified by match to protein family HMM PF00581	gene	gene867	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0888
BAA_0889	BAA_0889		BAA_0889	796661	797140	+		NADH dehydrogenase%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene868	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0889
BAA_0890	BAA_0890		BAA_0890	797174	797938	+	putative membrane protein	identified by match to protein family HMM PF01925	gene	gene869	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0890
BAA_0891	BAA_0891		BAA_0891	797972	798412	-	hypothetical protein	identified by glimmer%3B putative	gene	gene870	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0891
BAA_0892	BAA_0892		BAA_0892	798558	799754	-	transcription antiterminator%2C LytR family	identified by match to protein family HMM PF03816%3B match to protein family HMM TIGR00350	gene	gene871	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0892
BAA_0893	BAA_0893		BAA_0893	800068	801066	+	putative quinone oxidoreductase%2C YhdH/YhfP family	identified by match to protein family HMM PF00107%3B match to protein family HMM PF08240%3B match to protein family HMM TIGR02823	gene	gene872	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0893
BAA_0894	BAA_0894		BAA_0894	801101	802756	-	Na/Pi-cotransporter family protein	identified by match to protein family HMM PF01895%3B match to protein family HMM PF02690%3B match to protein family HMM TIGR00704	gene	gene873	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0894
BAA_0895	BAA_0895		BAA_0895	802877	803044	-	hypothetical protein	identified by glimmer%3B putative	gene	gene874	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0895
BAA_0896	BAA_0896		BAA_0896	803087	804286	-	major facilitator family transporter	identified by match to protein family HMM PF07690	gene	gene875	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0896
BAA_0897	BAA_0897		BAA_0897	804605	805693	+	conserved hypothetical protein	identified by match to protein family HMM PF05913	gene	gene876	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0897
BAA_0898	BAA_0898		BAA_0898	805766	807706	+	transcription antiterminator%2C BglG family	identified by match to protein family HMM PF00359%3B match to protein family HMM PF00874%3B match to protein family HMM PF05043%3B match to protein family HMM PF08279	gene	gene877	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0898
BAA_0899	BAA_0899	celC1	celC1	807818	808138	+	PTS system%2C cellobiose-specific IIA component	identified by match to protein family HMM PF02255	gene	gene878	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0899
BAA_0900	BAA_0900	celA1	celA1	808140	808445	+	PTS system%2C cellobiose-specific IIB component	identified by match to protein family HMM PF02302	gene	gene879	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0900
BAA_0901	BAA_0901	celB1	celB1	808528	809838	+	PTS system%2C cellobiose-specific IIC component	identified by match to protein family HMM PF02378%3B match to protein family HMM TIGR00410	gene	gene880	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0901
BAA_0902	BAA_0902		BAA_0902	809814	810092	+	hypothetical protein	identified by glimmer%3B putative	gene	gene881	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0902
BAA_0903	BAA_0903		BAA_0903	810082	811167	+	conserved hypothetical protein	identified by match to protein family HMM PF05913	gene	gene882	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0903
BAA_0904	BAA_0904		BAA_0904	811437	812597	-	conserved hypothetical protein	identified by match to protein family HMM PF06347%3B match to protein family HMM PF06725%3B match to protein family HMM PF08239	gene	gene883	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0904
BAA_0905	BAA_0905		BAA_0905	813168	814358	-	putative ABC transporter%2C permease protein	identified by match to protein family HMM PF02687	gene	gene884	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0905
BAA_0906	BAA_0906		BAA_0906	814346	815020	-	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene885	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0906
BAA_0907	BAA_0907		BAA_0907	815017	816123	-	conserved hypothetical protein	identified by match to protein family HMM TIGR01730	gene	gene886	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0907
BAA_0908	BAA_0908		BAA_0908	816334	817068	+	putative ABC transporter%2C permease protein	identified by match to protein family HMM PF09529%3B match to protein family HMM TIGR02206	gene	gene887	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0908
BAA_0909	BAA_0909		BAA_0909	817157	817858	+		putative ABC transporter%2C permease protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene888	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0909
BAA_0910	BAA_0910		BAA_0910	817888	818022	+		oligopeptide ABC transporter%2C permease%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene889	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0910
BAA_0911	BAA_0911		BAA_0911	818024	819028	+	ABC transporter%2C permease protein	identified by match to protein family HMM PF00528	gene	gene890	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0911
BAA_0912	BAA_0912	brnQ2	brnQ2	819073	820389	-	branched-chain amino acid transport system II carrier protein	identified by match to protein family HMM PF05525%3B match to protein family HMM TIGR00796	gene	gene891	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0912
BAA_0913	BAA_0913	cotJC	cotJC	820608	821177	-	cotJC protein	identified by match to protein family HMM PF05067	gene	gene892	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0913
BAA_0914	BAA_0914	cotJB	cotJB	821190	821453	-	cotJB protein		gene	gene893	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0914
BAA_0915	BAA_0915	cotJA	cotJA	821462	821677	-	cotJA protein		gene	gene894	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0915
BAA_0916	BAA_0916		BAA_0916	821778	822131	+	conserved hypothetical protein		gene	gene895	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0916
BAA_0917	BAA_0917		BAA_0917	822146	822925	+	conserved hypothetical protein		gene	gene896	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0917
BAA_0918	BAA_0918		BAA_0918	822943	823755	-	Ku protein	identified by match to protein family HMM PF02735%3B match to protein family HMM TIGR02772	gene	gene897	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0918
BAA_0920	BAA_0920		BAA_0920	824108	824389	+	conserved hypothetical protein	identified by match to protein family HMM PF06803	gene	gene898	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0920
BAA_0921	BAA_0921		BAA_0921	824400	825005	+	dedA family protein	identified by match to protein family HMM PF09335	gene	gene899	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0921
BAA_0922	BAA_0922		BAA_0922	825110	825478	+	hypothetical protein	identified by glimmer%3B putative	gene	gene900	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0922
BAA_0923	BAA_0923		BAA_0923	825499	825843	+	hypothetical protein	identified by glimmer%3B putative	gene	gene901	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0923
BAA_0924	BAA_0924		BAA_0924	826681	829140	+	purple acid phosphatase/fibronectin domain protein	identified by match to protein family HMM PF00041%3B match to protein family HMM PF00149	gene	gene902	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0924
BAA_0925	BAA_0925		BAA_0925	829220	829423	+	conserved hypothetical protein		gene	gene903	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0925
BAA_0926	BAA_0926		BAA_0926	829436	829606	+	hypothetical protein	identified by glimmer%3B putative	gene	gene904	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0926
BAA_0927	BAA_0927		BAA_0927	829635	831038	-	amino acid permease family protein	identified by match to protein family HMM PF00324	gene	gene905	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0927
BAA_0928	BAA_0928		BAA_0928	831315	832442	+	germination protein gerN	identified by match to protein family HMM PF00999%3B match to protein family HMM TIGR00932	gene	gene906	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0928
BAA_0929	BAA_0929		BAA_0929	832568	832882	+	hypothetical protein	identified by glimmer%3B putative	gene	gene907	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0929
BAA_0930	BAA_0930		BAA_0930	832912	833775	+	putative transcriptional regulator%2C RpiR family	identified by match to protein family HMM PF01380%3B match to protein family HMM PF01418	gene	gene908	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0930
BAA_0931	BAA_0931		BAA_0931	833931	834815	+	glucokinase regulator-related protein	identified by match to protein family HMM PF01380%3B match to protein family HMM TIGR00274	gene	gene909	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0931
BAA_0932	BAA_0932		BAA_0932	834840	836204	+	PTS system%2C sucrose-specific IIBC component	identified by match to protein family HMM PF00367%3B match to protein family HMM PF02378	gene	gene910	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0932
BAA_0933	BAA_0933		BAA_0933	836253	837317	+	conserved hypothetical protein	identified by match to protein family HMM PF05913	gene	gene911	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0933
BAA_0934	BAA_0934		BAA_0934	837478	837882	+	conserved hypothetical protein	identified by match to protein family HMM PF07681	gene	gene912	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0934
BAA_0935	BAA_0935		BAA_0935	838038	838439	+	conserved hypothetical protein		gene	gene913	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0935
BAA_0936	BAA_0936		BAA_0936	838514	838924	+	conserved hypothetical protein		gene	gene914	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0936
BAA_0937	BAA_0937		BAA_0937	838960	839922	-	transporter%2C EamA family	identified by match to protein family HMM PF00892%3B match to protein family HMM PF03151	gene	gene915	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0937
BAA_0938	BAA_0938		BAA_0938	840075	840569	+	transcriptional regulator%2C AsnC family	identified by match to protein family HMM PF01037	gene	gene916	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0938
BAA_0939	BAA_0939		BAA_0939	840698	841153	+	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene917	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0939
BAA_0940	BAA_0940		BAA_0940	841512	841856	+	putative sugE protein	identified by match to protein family HMM PF00893	gene	gene918	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0940
BAA_0941	BAA_0941		BAA_0941	841859	842173	+	putative sugE protein	identified by match to protein family HMM PF00893	gene	gene919	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0941
BAA_0942	BAA_0942		BAA_0942	842306	842881	+	transcriptional regulator%2C TetR family	identified by match to protein family HMM PF00440	gene	gene920	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0942
BAA_0943	BAA_0943	blT	blT	843083	844294	+	multidrug resistance protein	identified by match to protein family HMM PF00083%3B match to protein family HMM PF05978%3B match to protein family HMM PF07690	gene	gene921	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0943
BAA_0944	BAA_0944		BAA_0944	844328	844666	-	conserved hypothetical protein	identified by match to protein family HMM PF01047%3B match to protein family HMM PF01638	gene	gene922	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0944
BAA_0945	BAA_0945		BAA_0945	844835	845374	+	putative lipoprotein	identified by match to protein family HMM PF07366	gene	gene923	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0945
BAA_0946	BAA_0946		BAA_0946	845394	845942	+	NAD(P)H dehydrogenase%2C quinone family	identified by match to protein family HMM PF02525	gene	gene924	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0946
BAA_0947	BAA_0947		BAA_0947	846015	847754	-	putative ABC transporter%2C substrate-binding protein	identified by match to protein family HMM PF00496	gene	gene925	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0947
BAA_0948	BAA_0948		BAA_0948	847860	849116	+	major facilitator family transporter	identified by match to protein family HMM PF07690	gene	gene926	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0948
BAA_0949	BAA_0949		BAA_0949	849161	849364	-	hypothetical protein	identified by glimmer%3B putative	gene	gene927	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0949
BAA_0950	BAA_0950		BAA_0950	849602	850117	-	thiJ/pfpI family protein	identified by match to protein family HMM PF01965%3B match to protein family HMM TIGR01382	gene	gene928	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0950
BAA_0951	BAA_0951		BAA_0951	850141	852138	-	catalase	identified by match to protein family HMM PF00199%3B match to protein family HMM PF06628	gene	gene929	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0951
BAA_0952	BAA_0952		BAA_0952	852331	853530	-	putative permease	identified by match to protein family HMM PF05975	gene	gene930	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0952
BAA_0953	BAA_0953		BAA_0953	853591	854961	-	amino acid permease family protein	identified by match to protein family HMM PF00324	gene	gene931	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0953
BAA_0955	BAA_0955	racE1	racE1	855544	856374	+	glutamate racemase	identified by match to protein family HMM PF01177%3B match to protein family HMM TIGR00067	gene	gene932	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0955
BAA_0956	BAA_0956		BAA_0956	856487	857578	+	conserved hypothetical protein		gene	gene933	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0956
BAA_0957	BAA_0957	gapN	gapN	857653	859092	-	glyceraldehyde-3-phosphate dehydrogenase%2C NADP-dependent	identified by match to protein family HMM PF00171	gene	gene934	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0957
BAA_0958	BAA_0958		BAA_0958	859683	861443	+	ABC transporter%2C permease/ATP-binding protein	identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664	gene	gene935	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0958
BAA_0959	BAA_0959		BAA_0959	861440	862690	+		ABC transporter%2C permease/ATP-binding protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00664	pseudogene	gene936	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0959
BAA_0960	BAA_0960		BAA_0960	862702	863442	+		lipid A export ATP-binding/permease protein MsbA%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00005	pseudogene	gene937	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0960
BAA_0961	BAA_0961		BAA_0961	863715	864512	+	amino acid ABC transporter%2C amino acid-binding protein	identified by match to protein family HMM PF00497	gene	gene938	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0961
BAA_0962	BAA_0962		BAA_0962	864490	865197	+	amino acid ABC transporter%2C permease protein	identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01726	gene	gene939	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0962
BAA_0963	BAA_0963		BAA_0963	865226	865960	+	amino acid ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene940	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0963
BAA_0964	BAA_0964	sasP1	sasP1	866012	866215	-	small acid-soluble spore protein	identified by match to protein family HMM PF00269	gene	gene941	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0964
BAA_0965	BAA_0965		BAA_0965	866572	866817	+	conserved hypothetical protein		gene	gene942	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0965
BAA_0966	BAA_0966		BAA_0966	866834	868294	-	conserved hypothetical protein		gene	gene943	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0966
BAA_0967	BAA_0967		BAA_0967	868315	869367	-	conserved hypothetical protein		gene	gene944	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0967
BAA_0968	BAA_0968		BAA_0968	869502	870638	+	conserved hypothetical protein	identified by match to protein family HMM PF04286	gene	gene945	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0968
BAA_0969	BAA_0969		BAA_0969	870780	871136	+	conserved hypothetical protein	identified by match to protein family HMM PF06133	gene	gene946	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0969
BAA_0970	BAA_0970		BAA_0970	871175	871771	-	putative lipoprotein		gene	gene947	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0970
BAA_0971	BAA_0971		BAA_0971	871793	872353	-	conserved hypothetical protein	identified by match to protein family HMM PF08006	gene	gene948	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0971
BAA_0972	BAA_0972	alsS	alsS	872758	874446	+	acetolactate synthase%2C catabolic	identified by match to protein family HMM PF00205%3B match to protein family HMM PF02775%3B match to protein family HMM PF02776%3B match to protein family HMM TIGR02418	gene	gene949	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0972
BAA_0973	BAA_0973	alsD	alsD	874463	875221	+	alpha-acetolactate decarboxylase	identified by match to protein family HMM PF03306%3B match to protein family HMM TIGR01252	gene	gene950	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0973
BAA_0974	BAA_0974		BAA_0974	875258	875614	-	hypothetical protein	identified by glimmer%3B putative	gene	gene951	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0974
BAA_0975	BAA_0975		BAA_0975	875636	876253	-	methylpurine-DNA glycosylase family protein	identified by match to protein family HMM PF02245%3B match to protein family HMM TIGR00567	gene	gene952	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0975
BAA_0976	BAA_0976		BAA_0976	876394	877266	+	hydrolase%2C haloacid dehalogenase-like family	identified by match to protein family HMM PF00702%3B match to protein family HMM PF05116%3B match to protein family HMM PF08282%3B match to protein family HMM TIGR01484	gene	gene953	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0976
BAA_0977	BAA_0977		BAA_0977	877760	880660	+	LPXTG-motif cell wall anchor domain protein	identified by match to protein family HMM PF05738%3B match to protein family HMM TIGR01167	gene	gene954	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0977
BAA_0978	BAA_0978		BAA_0978	880718	881764	-		N-acetylmuramoyl-L-alanine amidase%2C family 2%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00395%3B match to protein family HMM PF01510	pseudogene	gene955	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0978
BAA_0979	BAA_0979		BAA_0979	881761	882456	-		conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene956	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0979
BAA_0980	BAA_0980		BAA_0980	882717	884204	+	putative oxygen-independent coproporphyrinogen III oxidase	identified by match to protein family HMM PF04055	gene	gene957	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0980
BAA_0981	BAA_0981		BAA_0981	884519	886075	+	AMP-binding protein	identified by match to protein family HMM PF00501	gene	gene958	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0981
BAA_0982	BAA_0982		BAA_0982	886103	886567	-	conserved hypothetical protein		gene	gene959	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0982
BAA_0983	BAA_0983		BAA_0983	886756	888234	+	sulfate permease family protein	identified by match to protein family HMM PF00860%3B match to protein family HMM PF00916%3B match to protein family HMM PF00955%3B match to protein family HMM PF01740	gene	gene960	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0983
BAA_0984	BAA_0984		BAA_0984	888577	888831	+	hypothetical protein	identified by glimmer%3B putative	gene	gene961	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0984
BAA_0985	BAA_0985		BAA_0985	889190	889561	+	hypothetical protein	identified by glimmer%3B putative	gene	gene962	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0985
BAA_0986	BAA_0986		BAA_0986	889663	890544	-	conserved domain protein		gene	gene963	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0986
BAA_0987	BAA_0987	secA1	secA1	890559	892925	-	preprotein translocase%2C SecA subunit	identified by match to protein family HMM PF00271%3B match to protein family HMM PF01043%3B match to protein family HMM PF07516%3B match to protein family HMM PF07517%3B match to protein family HMM TIGR00963	gene	gene964	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0987
BAA_0988	BAA_0988		BAA_0988	893208	894728	+	polysaccharide synthase family protein	identified by match to protein family HMM PF01943%3B match to protein family HMM PF03023	gene	gene965	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0988
BAA_0989	BAA_0989	csaB	csaB	894870	895973	+	polysaccharide pyruvyl transferase CsaB	identified by match to protein family HMM PF04230%3B match to protein family HMM TIGR03609	gene	gene966	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0989
BAA_0990	BAA_0990	sap	sap	896649	899093	+	S-layer protein Sap	identified by match to protein family HMM PF00395%3B match to protein family HMM PF02368	gene	gene967	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0990
BAA_0991	BAA_0991	eag	eag	899815	902403	+	S-layer protein EA1	identified by match to protein family HMM PF00395	gene	gene968	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0991
BAA_0992	BAA_0992		BAA_0992	902499	903689	-	conserved hypothetical protein		gene	gene969	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0992
BAA_0993	BAA_0993		BAA_0993	903714	905129	-	putative alginate O-acetyltransferase	identified by match to protein family HMM PF03062	gene	gene970	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0993
BAA_0994	BAA_0994		BAA_0994	905356	906813	+	putative alginate O-acetyltransferase	identified by match to protein family HMM PF03062	gene	gene971	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0994
BAA_0995	BAA_0995		BAA_0995	906823	907854	+	conserved hypothetical protein		gene	gene972	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0995
BAA_0996	BAA_0996		BAA_0996	907996	909375	-	putative membrane protein		gene	gene973	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0996
BAA_0997	BAA_0997		BAA_0997	909677	910465	+	enoyl-CoA hydratase/isomerase family protein	identified by match to protein family HMM PF00378	gene	gene974	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0997
BAA_0998	BAA_0998		BAA_0998	910715	911020	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene975	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0998
BAA_0999	BAA_0999		BAA_0999	911059	911238	-	hypothetical protein	identified by glimmer%3B putative	gene	gene976	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_0999
BAA_1000	BAA_1000		BAA_1000	911365	912414	+	Peptidase%2C family M20/M25/M40 protein	identified by match to protein family HMM PF05343	gene	gene977	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1000
BAA_1001	BAA_1001		BAA_1001	912654	914243	+	surface-layer N-acetylmuramoyl-L-alanine amidase	identified by match to protein family HMM PF00395%3B match to protein family HMM PF01520	gene	gene978	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1001
BAA_1002	BAA_1002		BAA_1002	914376	915329	+	conserved domain protein	identified by match to protein family HMM PF01170	gene	gene979	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1002
BAA_1003	BAA_1003		BAA_1003	915533	915679	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene980	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1003
BAA_1004	BAA_1004		BAA_1004	915912	916907	+	putative proline racemase	identified by match to protein family HMM PF05544	gene	gene981	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1004
BAA_1005	BAA_1005		BAA_1005	916927	917904	+	ornithine cyclodeaminase/mu-crystallin family protein	identified by match to protein family HMM PF01488%3B match to protein family HMM PF02423	gene	gene982	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1005
BAA_1006	BAA_1006		BAA_1006	918290	918520	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene983	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1006
BAA_1007	BAA_1007		BAA_1007	919259	919930	+	putative membrane protein		gene	gene984	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1007
BAA_1008	BAA_1008		BAA_1008	920341	920991	+	hypothetical protein	identified by glimmer%3B putative	gene	gene985	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1008
BAA_1009	BAA_1009		BAA_1009	921043	921204	+	hypothetical protein	identified by glimmer%3B putative	gene	gene986	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1009
BAA_1010	BAA_1010		BAA_1010	921303	921473	-		conserved hypothetical protein%2C truncation%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene987	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1010
BAA_1011	BAA_1011		BAA_1011	921959	923545	+	oligopeptide ABC transporter%2C oligopeptide-binding protein	identified by match to protein family HMM PF00496	gene	gene988	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1011
BAA_1012	BAA_1012		BAA_1012	923605	924555	+	oligopeptide ABC transporter%2C permease protein	identified by match to protein family HMM PF00528	gene	gene989	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1012
BAA_1013	BAA_1013		BAA_1013	924562	925413	+	oligopeptide ABC transporter%2C permease protein	identified by match to protein family HMM PF00528	gene	gene990	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1013
BAA_1014	BAA_1014		BAA_1014	925440	925880	+		oligopeptide ABC transporter%2C ATP-binding protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene991	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1014
BAA_1015	BAA_1015		BAA_1015	925932	926432	+		dipeptide transport ATP-binding protein DppD%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF08352%3B match to protein family HMM TIGR01727	pseudogene	gene992	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1015
BAA_1016	BAA_1016		BAA_1016	926425	927396	+	oligopeptide ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727	gene	gene993	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1016
BAA_1017	BAA_1017		BAA_1017	928036	928665	+	conserved hypothetical protein		gene	gene994	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1017
BAA_1018	BAA_1018		BAA_1018	928835	929407	+	hypothetical protein	identified by glimmer%3B putative	gene	gene995	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1018
BAA_1019	BAA_1019		BAA_1019	929444	929563	+	hypothetical protein	identified by glimmer%3B putative	gene	gene996	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1019
BAA_1020	BAA_1020		BAA_1020	929548	929964	+		hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by glimmer%3B putative	pseudogene	gene997	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1020
BAA_1021	BAA_1021		BAA_1021	930032	930490	+	conserved hypothetical protein	identified by match to protein family HMM PF09346	gene	gene998	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1021
BAA_1022	BAA_1022		BAA_1022	931059	932381	-	putative alpha-ketoglutarate permease	identified by match to protein family HMM PF00083%3B match to protein family HMM PF07690	gene	gene999	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1022
BAA_1023	BAA_1023		BAA_1023	932607	934196	+	sensor histidine kinase	identified by match to protein family HMM PF00989%3B match to protein family HMM PF02518%3B match to protein family HMM PF08448	gene	gene1000	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1023
BAA_1024	BAA_1024		BAA_1024	934215	934892	+	response regulator	identified by match to protein family HMM PF00072	gene	gene1001	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1024
BAA_1025	BAA_1025		BAA_1025	934889	935866	+	putative lipoprotein	identified by match to protein family HMM PF03401	gene	gene1002	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1025
BAA_1026	BAA_1026		BAA_1026	936087	937295	+	putative tellurium resistance protein	identified by match to protein family HMM PF02342	gene	gene1003	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1026
BAA_1027	BAA_1027		BAA_1027	937395	939926	+	conserved hypothetical protein	identified by match to protein family HMM PF07728	gene	gene1004	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1027
BAA_1028	BAA_1028		BAA_1028	939901	942345	+	conserved domain protein		gene	gene1005	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1028
BAA_1029	BAA_1029		BAA_1029	942664	942780	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1006	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1029
BAA_1030	BAA_1030		BAA_1030	942842	943027	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1007	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1030
BAA_1031	BAA_1031		BAA_1031	943031	943282	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1008	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1031
BAA_1032	BAA_1032		BAA_1032	943291	944034	+	transcriptional regulator%2C MerR family	identified by match to protein family HMM PF00376	gene	gene1009	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1032
BAA_1033	BAA_1033		BAA_1033	944088	944414	+	conserved hypothetical protein		gene	gene1010	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1033
BAA_1034	BAA_1034		BAA_1034	944615	945475	+	DnaD domain protein	identified by match to protein family HMM PF04271%3B match to protein family HMM TIGR01446	gene	gene1011	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1034
BAA_1035	BAA_1035		BAA_1035	945472	946758	+	putative replicative DNA helicase	identified by match to protein family HMM PF00772%3B match to protein family HMM PF03796%3B match to protein family HMM TIGR00665	gene	gene1012	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1035
BAA_1036	BAA_1036		BAA_1036	946791	946958	+	conserved domain protein		gene	gene1013	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1036
BAA_1037	BAA_1037		BAA_1037	947085	947501	+	putative lipoprotein		gene	gene1014	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1037
BAA_1038	BAA_1038		BAA_1038	947523	947867	+	conserved hypothetical protein		gene	gene1015	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1038
BAA_1039	BAA_1039		BAA_1039	948202	949023	-	conserved hypothetical protein	identified by match to protein family HMM PF01978	gene	gene1016	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1039
BAA_1040	BAA_1040		BAA_1040	949098	949865	+	putative membrane protein	identified by match to protein family HMM PF01925	gene	gene1017	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1040
BAA_1041	BAA_1041		BAA_1041	950218	950373	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1018	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1041
BAA_1042	BAA_1042		BAA_1042	950545	951120	-	transcriptional regulator%2C TetR-related family		gene	gene1019	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1042
BAA_1043	BAA_1043		BAA_1043	951263	952723	+	drug resistance transporter%2C EmrB/QacA family	identified by match to protein family HMM PF07690%3B match to protein family HMM TIGR00711	gene	gene1020	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1043
BAA_1044	BAA_1044		BAA_1044	952765	953292	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1021	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1044
BAA_1045	BAA_1045		BAA_1045	953289	953771	-	conserved hypothetical protein		gene	gene1022	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1045
BAA_1046	BAA_1046		BAA_1046	953764	954105	-	transcriptional regulator%2C PadR family	identified by match to protein family HMM PF03551	gene	gene1023	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1046
BAA_1047	BAA_1047		BAA_1047	954306	954431	-	conserved hypothetical protein	identified by match to protein family HMM PF09680%3B match to protein family HMM TIGR01732	gene	gene1024	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1047
BAA_1048	BAA_1048		BAA_1048	954631	954897	+	protein-export membrane protein-related protein		gene	gene1025	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1048
BAA_1049	BAA_1049		BAA_1049	955245	956651	-	conserved hypothetical protein	identified by match to protein family HMM PF03403	gene	gene1026	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1049
BAA_1050	BAA_1050		BAA_1050	957083	957667	+	conserved hypothetical protein	identified by match to protein family HMM PF07336	gene	gene1027	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1050
BAA_1051	BAA_1051		BAA_1051	957784	958338	+	conserved hypothetical protein	identified by match to protein family HMM PF04982	gene	gene1028	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1051
BAA_1052	BAA_1052		BAA_1052	958693	960576	-	mxaA domain protein	identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF07993	gene	gene1029	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1052
BAA_1053	BAA_1053		BAA_1053	960634	961218	-	transcriptional regulator%2C TetR family	identified by match to protein family HMM PF00440	gene	gene1030	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1053
BAA_1054	BAA_1054		BAA_1054	961618	961884	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1031	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1054
BAA_1055	BAA_1055		BAA_1055	962265	962621	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1032	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1055
BAA_1056	BAA_1056		BAA_1056	962893	963351	+	transcriptional regulator%2C MarR family	identified by match to protein family HMM PF01047	gene	gene1033	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1056
BAA_1057	BAA_1057	pssA	pssA	963395	963928	+	CDP-diacylglycerol--serine O-phosphatidyltransferase	identified by match to protein family HMM PF01066%3B match to protein family HMM TIGR00473	gene	gene1034	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1057
BAA_1058	BAA_1058		BAA_1058	963952	964323	+	putative ATP synthase protein I		gene	gene1035	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1058
BAA_1059	BAA_1059		BAA_1059	964616	965269	+	putative membrane protein		gene	gene1036	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1059
BAA_1060	BAA_1060		BAA_1060	965627	966265	+	putative membrane protein	identified by match to protein family HMM PF04892	gene	gene1037	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1060
BAA_1061	BAA_1061		BAA_1061	966365	967363	-	dihydroxyacetone kinase family protein	identified by match to protein family HMM PF02733%3B match to protein family HMM TIGR02362	gene	gene1038	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1061
BAA_1062	BAA_1062		BAA_1062	967383	967958	-	conserved hypothetical protein	identified by match to protein family HMM TIGR02366	gene	gene1039	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1062
BAA_1063	BAA_1063		BAA_1063	968128	969879	+	dihydroxyacetone kinase family protein	identified by match to protein family HMM PF02733%3B match to protein family HMM PF02734%3B match to protein family HMM TIGR02363%3B match to protein family HMM TIGR02365	gene	gene1040	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1063
BAA_1064	BAA_1064		BAA_1064	969933	970595	-	conserved hypothetical protein	identified by match to protein family HMM PF02525	gene	gene1041	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1064
BAA_1065	BAA_1065		BAA_1065	970806	971312	+	conserved hypothetical protein	identified by match to protein family HMM PF02082%3B match to protein family HMM TIGR00738	gene	gene1042	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1065
BAA_1066	BAA_1066		BAA_1066	971516	971905	+	conserved hypothetical protein		gene	gene1043	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1066
BAA_1067	BAA_1067		BAA_1067	971968	972087	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1044	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1067
BAA_1068	BAA_1068		BAA_1068	972200	972319	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1045	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1068
BAA_1069	BAA_1069		BAA_1069	972530	973363	-	CAAX amino terminal protease family protein	identified by match to protein family HMM PF02517	gene	gene1046	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1069
BAA_1070	BAA_1070		BAA_1070	973458	973652	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1047	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1070
BAA_1071	BAA_1071		BAA_1071	974064	974192	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1048	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1071
BAA_1072	BAA_1072		BAA_1072	974747	975871	+	HD domain protein	identified by match to protein family HMM PF01966	gene	gene1049	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1072
BAA_1073	BAA_1073		BAA_1073	976022	976177	-	conserved hypothetical protein	identified by match to protein family HMM PF09680%3B match to protein family HMM TIGR01732	gene	gene1050	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1073
BAA_1074	BAA_1074		BAA_1074	976536	976817	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1051	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1074
BAA_1075	BAA_1075		BAA_1075	977454	977669	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1052	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1075
BAA_1076	BAA_1076		BAA_1076	979109	980842	+	putative S-layer protein	identified by match to protein family HMM PF00395	gene	gene1053	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1076
BAA_1077	BAA_1077		BAA_1077	980983	981297	+	conserved hypothetical protein	identified by match to protein family HMM PF01047%3B match to protein family HMM PF03551	gene	gene1054	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1077
BAA_1078	BAA_1078		BAA_1078	981311	981922	+	conserved hypothetical protein		gene	gene1055	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1078
BAA_1079	BAA_1079		BAA_1079	982975	983436	-	putative lipoprotein		gene	gene1056	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1079
BAA_1080	BAA_1080		BAA_1080	983650	984039	+	conserved hypothetical protein		gene	gene1057	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1080
BAA_1081	BAA_1081		BAA_1081	984090	984290	+	conserved hypothetical protein	identified by match to protein family HMM PF05532	gene	gene1058	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1081
BAA_1082	BAA_1082		BAA_1082	984366	984617	+	conserved hypothetical protein	identified by match to protein family HMM PF04226	gene	gene1059	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1082
BAA_1083	BAA_1083		BAA_1083	984798	984998	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1060	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1083
BAA_1084	BAA_1084	rsbV	rsbV	985196	985534	+	anti sigma b factor antagonist RsbV	identified by match to protein family HMM PF01740%3B match to protein family HMM TIGR00377	gene	gene1061	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1084
BAA_1085	BAA_1085	rsbW	rsbW	985541	986023	+	anti-sigma b factor	identified by match to protein family HMM PF02518%3B match to protein family HMM TIGR01924	gene	gene1062	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1085
BAA_1086	BAA_1086	sigB	sigB	985989	986762	+	RNA polymerase sigma-B factor	identified by match to protein family HMM PF04539%3B match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM TIGR02937%3B match to protein family HMM TIGR02941%3B match to protein family HMM TIGR02980	gene	gene1063	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1086
BAA_1087	BAA_1087		BAA_1087	986832	987272	+	conserved hypothetical protein	identified by match to protein family HMM PF00210	gene	gene1064	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1087
BAA_1088	BAA_1088		BAA_1088	987448	988590	+	response regulator	identified by match to protein family HMM PF00072%3B match to protein family HMM PF07228	gene	gene1065	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1088
BAA_1089	BAA_1089		BAA_1089	988629	989486	-	methyltransferase%2C CheR family	identified by match to protein family HMM PF01739%3B match to protein family HMM PF03705	gene	gene1066	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1089
BAA_1090	BAA_1090		BAA_1090	989503	992193	-	sensor histidine kinase/response regulator	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF01590%3B match to protein family HMM PF02518	gene	gene1067	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1090
BAA_1091	BAA_1091		BAA_1091	992399	992650	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1068	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1091
BAA_1092	BAA_1092		BAA_1092	992872	993009	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1069	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1092
BAA_1093	BAA_1093		BAA_1093	993049	993579	+	conserved hypothetical protein		gene	gene1070	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1093
BAA_1094	BAA_1094		BAA_1094	993793	993921	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1071	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1094
BAA_1095	BAA_1095		BAA_1095	994064	994375	+	conserved hypothetical protein	identified by match to protein family HMM PF01906	gene	gene1072	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1095
BAA_1096	BAA_1096		BAA_1096	994710	994856	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1073	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1096
BAA_1097	BAA_1097		BAA_1097	994954	995259	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1074	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1097
BAA_1098	BAA_1098		BAA_1098	995377	996372	-	oxidoreductase%2C zinc-binding dehydrogenase family	identified by match to protein family HMM PF00107%3B match to protein family HMM PF08240	gene	gene1075	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1098
BAA_1099	BAA_1099		BAA_1099	996501	996641	-	conserved hypothetical protein		gene	gene1076	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1099
BAA_1100	BAA_1100		BAA_1100	996796	997158	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1077	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1100
BAA_1101	BAA_1101		BAA_1101	997185	997370	-	conserved hypothetical protein		gene	gene1078	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1101
BAA_1102	BAA_1102		BAA_1102	997482	998780	+	DNA repair exonuclease family protein	identified by match to protein family HMM PF00149	gene	gene1079	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1102
BAA_1103	BAA_1103		BAA_1103	998777	999376	+	conserved domain protein		gene	gene1080	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1103
BAA_1104	BAA_1104		BAA_1104	999436	999756	+			gene	gene1081	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1104
BAA_1105	BAA_1105		BAA_1105	1000015	1001145	+	transposase%2C IS605 family	identified by match to protein family HMM PF01385%3B match to protein family HMM PF07282%3B match to protein family HMM TIGR01766	gene	gene1082	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1105
BAA_1106	BAA_1106		BAA_1106	1001313	1003616	+	conserved hypothetical protein		gene	gene1083	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1106
BAA_1107	BAA_1107		BAA_1107	1003658	1004602	+	HD domain protein	identified by match to protein family HMM PF01336%3B match to protein family HMM PF01966	gene	gene1084	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1107
BAA_1108	BAA_1108		BAA_1108	1004779	1005354	+	transcriptional regulator%2C TetR family	identified by match to protein family HMM PF00440	gene	gene1085	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1108
BAA_1109	BAA_1109		BAA_1109	1005412	1006623	+	putative transporter	identified by match to protein family HMM PF07690	gene	gene1086	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1109
BAA_1110	BAA_1110		BAA_1110	1007040	1007984	+	glyoxalase family protein	identified by match to protein family HMM PF00903	gene	gene1087	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1110
BAA_1111	BAA_1111		BAA_1111	1008028	1009005	+	glyoxylase family protein	identified by match to protein family HMM PF00903	gene	gene1088	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1111
BAA_1112	BAA_1112		BAA_1112	1009229	1010341	+	TPR domain protein	identified by match to protein family HMM PF00515	gene	gene1089	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1112
BAA_1113	BAA_1113		BAA_1113	1010338	1010469	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1090	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1113
BAA_1114	BAA_1114		BAA_1114	1010697	1011572	+	hydrolase%2C alpha/beta fold family	identified by match to protein family HMM PF00561	gene	gene1091	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1114
BAA_1115	BAA_1115		BAA_1115	1011713	1011853	+	conserved hypothetical protein		gene	gene1092	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1115
BAA_1116	BAA_1116		BAA_1116	1012027	1012878	+	conserved hypothetical protein		gene	gene1093	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1116
BAA_1117	BAA_1117		BAA_1117	1013238	1013687	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1094	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1117
BAA_1118	BAA_1118	glpP	glpP	1013785	1014345	+	glycerol uptake operon antiterminator regulatory protein	identified by match to protein family HMM PF04309	gene	gene1095	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1118
BAA_1119	BAA_1119	glpF	glpF	1014574	1015395	+	glycerol uptake facilitator protein	identified by match to protein family HMM PF00230%3B match to protein family HMM TIGR00861	gene	gene1096	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1119
BAA_1120	BAA_1120	glpK	glpK	1015409	1016899	+	glycerol kinase	identified by match to protein family HMM PF00370%3B match to protein family HMM PF02782%3B match to protein family HMM TIGR01311	gene	gene1097	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1120
BAA_1121	BAA_1121	glpD	glpD	1017033	1018715	+	glycerol-3-phosphate dehydrogenase%2C aerobic	identified by match to protein family HMM PF01266	gene	gene1098	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1121
BAA_1122	BAA_1122		BAA_1122	1018913	1019077	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1099	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1122
BAA_1123	BAA_1123		BAA_1123	1019525	1019935	+	conserved hypothetical protein		gene	gene1100	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1123
BAA_1124	BAA_1124		BAA_1124	1020190	1020723	+	RNA polymerase sigma-70 factor%2C ECF subfamily	identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937	gene	gene1101	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1124
BAA_1125	BAA_1125		BAA_1125	1020728	1021135	+	transcriptional regulator%2C PadR family	identified by match to protein family HMM PF03551	gene	gene1102	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1125
BAA_1126	BAA_1126		BAA_1126	1021143	1022393	+	cell division protein%2C FtsW/RodA/SpoVE family		gene	gene1103	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1126
BAA_1127	BAA_1127		BAA_1127	1022451	1022936	-	transcriptional regulator%2C MarR family	identified by match to protein family HMM PF01047	gene	gene1104	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1127
BAA_1128	BAA_1128		BAA_1128	1023221	1023586	+	conserved hypothetical protein	identified by match to protein family HMM PF07681	gene	gene1105	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1128
BAA_1129	BAA_1129		BAA_1129	1023748	1025139	+	major facilitator family transporter	identified by match to protein family HMM PF07690	gene	gene1106	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1129
BAA_1130	BAA_1130		BAA_1130	1025162	1026610	+	drug resistance transporter%2C EmrB/QacA family	identified by match to protein family HMM PF07690%3B match to protein family HMM TIGR00711	gene	gene1107	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1130
BAA_1131	BAA_1131		BAA_1131	1026779	1027342	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1108	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1131
BAA_1132	BAA_1132		BAA_1132	1027430	1029760	-	helicase%2C UvrD/Rep family	identified by match to protein family HMM PF00580	gene	gene1109	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1132
BAA_1133	BAA_1133	prsA1	prsA1	1030138	1031001	-	peptidylprolyl isomerase PrsA1	identified by match to protein family HMM PF00639	gene	gene1110	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1133
BAA_1134	BAA_1134		BAA_1134	1031290	1031439	+	conserved hypothetical protein		gene	gene1111	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1134
BAA_1135	BAA_1135		BAA_1135	1031740	1032075	+	conserved hypothetical protein	identified by match to protein family HMM PF08963	gene	gene1112	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1135
BAA_1136	BAA_1136	hpr	hpr	1032081	1032638	-	protease production regulatory protein Hpr	identified by match to protein family HMM PF01047	gene	gene1113	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1136
BAA_1137	BAA_1137		BAA_1137	1032937	1033299	-	conserved hypothetical protein		gene	gene1114	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1137
BAA_1138	BAA_1138		BAA_1138	1033477	1033911	-	HIT family protein	identified by match to protein family HMM PF01230	gene	gene1115	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1138
BAA_1139	BAA_1139	ecsA	ecsA	1034471	1035214	+	ABC transporter%2C ATP-binding protein EcsA	identified by match to protein family HMM PF00005	gene	gene1116	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1139
BAA_1140	BAA_1140	ecsB	ecsB	1035207	1036418	+	ABC transporter%2C permease protein EscB	identified by match to protein family HMM PF05975	gene	gene1117	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1140
BAA_1141	BAA_1141	ecsC	ecsC	1036432	1037139	+	EcsC protein		gene	gene1118	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1141
BAA_1142	BAA_1142		BAA_1142	1037180	1037323	-	conserved hypothetical protein	identified by match to protein family HMM PF09680%3B match to protein family HMM TIGR01732	gene	gene1119	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1142
BAA_1143	BAA_1143		BAA_1143	1037479	1038060	+	transcriptional regulator%2C TetR family	identified by match to protein family HMM PF00440	gene	gene1120	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1143
BAA_1144	BAA_1144		BAA_1144	1038063	1038230	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1121	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1144
BAA_1145	BAA_1145		BAA_1145	1038310	1038786	+	conserved hypothetical protein	identified by match to protein family HMM PF03703	gene	gene1122	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1145
BAA_1146	BAA_1146		BAA_1146	1038806	1039123	+		membrane-flanked domain%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1123	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1146
BAA_1147	BAA_1147		BAA_1147	1039098	1040231	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF03703	pseudogene	gene1124	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1147
BAA_1148	BAA_1148		BAA_1148	1040336	1040770	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1125	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1148
BAA_1149	BAA_1149		BAA_1149	1040780	1041046	+	conserved hypothetical protein		gene	gene1126	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1149
BAA_1150	BAA_1150		BAA_1150	1041756	1042127	+	putative membrane protein	identified by match to protein family HMM PF06993	gene	gene1127	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1150
BAA_1151	BAA_1151		BAA_1151	1042819	1043643	+	putative lipoprotein		gene	gene1128	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1151
BAA_1152	BAA_1152		BAA_1152	1043993	1044352	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00805	pseudogene	gene1129	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1152
BAA_1153	BAA_1153		BAA_1153	1044630	1045433	+	transcriptional regulator%2C MerR family	identified by match to protein family HMM PF00376%3B match to protein family HMM PF09278	gene	gene1130	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1153
BAA_1154	BAA_1154		BAA_1154	1045736	1046032	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1131	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1154
BAA_1155	BAA_1155		BAA_1155	1046106	1046582	+	conserved hypothetical protein	identified by match to protein family HMM PF03703	gene	gene1132	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1155
BAA_1156	BAA_1156		BAA_1156	1046632	1047993	+	putative membrane protein	identified by match to protein family HMM PF03703	gene	gene1133	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1156
BAA_1157	BAA_1157		BAA_1157	1048146	1048649	-	conserved hypothetical protein	identified by match to protein family HMM PF03992	gene	gene1134	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1157
BAA_1158	BAA_1158	pbpF	pbpF	1048777	1050894	+	penicillin-binding protein 1	identified by match to protein family HMM PF00905%3B match to protein family HMM PF00912%3B match to protein family HMM TIGR02074	gene	gene1135	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1158
BAA_1159	BAA_1159	hemE	hemE	1051050	1052120	+	uroporphyrinogen decarboxylase	identified by match to protein family HMM PF01208%3B match to protein family HMM TIGR01464	gene	gene1136	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1159
BAA_1160	BAA_1160	hemH1	hemH1	1052135	1053070	+	ferrochelatase	identified by match to protein family HMM PF00762%3B match to protein family HMM TIGR00109	gene	gene1137	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1160
BAA_1161	BAA_1161	hemY1	hemY1	1053090	1054511	+	protoporphyrinogen oxidase	identified by match to protein family HMM PF01593%3B match to protein family HMM TIGR00562	gene	gene1138	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1161
BAA_1162	BAA_1162		BAA_1162	1054551	1055903	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1139	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1162
BAA_1163	BAA_1163		BAA_1163	1056144	1058510	+	endonuclease/exonuclease/phosphatase family protein	identified by match to protein family HMM PF03372	gene	gene1140	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1163
BAA_1164	BAA_1164		BAA_1164	1059012	1059851	-	putative membrane protein		gene	gene1142	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1164
BAA_1165	BAA_1165		BAA_1165	1058662	1059015	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1141	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1165
BAA_1166	BAA_1166	blaI	blaI	1060081	1060479	+	penicillinase repressor	identified by match to protein family HMM PF03965	gene	gene1143	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1166
BAA_1167	BAA_1167		BAA_1167	1060476	1062383	+	putative membrane protein	identified by match to protein family HMM PF05569	gene	gene1144	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1167
BAA_1168	BAA_1168		BAA_1168	1062597	1063169	+	transcriptional regulator%2C TetR family	identified by match to protein family HMM PF00440	gene	gene1145	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1168
BAA_1169	BAA_1169		BAA_1169	1063381	1065993	+	conserved hypothetical protein	identified by match to protein family HMM PF01061%3B match to protein family HMM TIGR03061%3B match to protein family HMM TIGR03062	gene	gene1146	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1169
BAA_1170	BAA_1170		BAA_1170	1066137	1066352	+	conserved domain protein		gene	gene1147	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1170
BAA_1171	BAA_1171		BAA_1171	1066389	1066694	+	conserved hypothetical protein		gene	gene1148	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1171
BAA_1172	BAA_1172		BAA_1172	1066721	1067074	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1149	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1172
BAA_1173	BAA_1173		BAA_1173	1067208	1067711	+	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene1150	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1173
BAA_1174	BAA_1174		BAA_1174	1067949	1068926	+		sugar-binding transcriptional regulator%2C LacI family%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF00356%3B match to protein family HMM PF00532	pseudogene	gene1151	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1174
BAA_1175	BAA_1175		BAA_1175	1069002	1069130	-	conserved hypothetical protein		gene	gene1152	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1175
BAA_1176	BAA_1176		BAA_1176	1069310	1070044	+	metallo-beta-lactamase family protein	identified by match to protein family HMM PF00753	gene	gene1153	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1176
BAA_1177	BAA_1177		BAA_1177	1070054	1071043	+	putative lipoate-protein ligase A	identified by match to protein family HMM PF03099%3B match to protein family HMM TIGR00545	gene	gene1154	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1177
BAA_1178	BAA_1178		BAA_1178	1071298	1071726	+	putative lipoprotein		gene	gene1155	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1178
BAA_1179	BAA_1179		BAA_1179	1071888	1073420	+	putative long-chain-fatty-acid--CoA ligase	identified by match to protein family HMM PF00501	gene	gene1156	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1179
BAA_1180	BAA_1180		BAA_1180	1073533	1073784	+	group-specific protein		gene	gene1157	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1180
BAA_1181	BAA_1181		BAA_1181	1073874	1074908	+	putative S-layer protein	identified by match to protein family HMM PF00395%3B match to protein family HMM PF05031	gene	gene1158	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1181
BAA_1182	BAA_1182		BAA_1182	1075234	1081908	+	putative wall-associated protein	identified by match to protein family HMM PF02018%3B match to protein family HMM PF05593%3B match to protein family HMM TIGR01643%3B match to protein family HMM TIGR03696	gene	gene1159	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1182
BAA_1183	BAA_1183		BAA_1183	1081916	1082395	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1160	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1183
BAA_1184	BAA_1184		BAA_1184	1082424	1082777	+	conserved hypothetical protein	identified by match to protein family HMM PF06877	gene	gene1161	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1184
BAA_1185	BAA_1185		BAA_1185	1082833	1083585	+	wall-associated domain protein	identified by match to protein family HMM TIGR03696	gene	gene1162	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1185
BAA_1186	BAA_1186		BAA_1186	1083578	1083823	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1163	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1186
BAA_1187	BAA_1187		BAA_1187	1083898	1084032	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1164	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1187
BAA_1188	BAA_1188		BAA_1188	1084359	1084517	+		conserved hypothetical protein%3B this region contains one or more premature stops and/or frameshifts	pseudogene	gene1165	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1188
BAA_1189	BAA_1189		BAA_1189	1084669	1085214	+		conserved hypothetical protein%3B this region contains one or more premature stops and/or frameshifts%3B identified by match to protein family HMM TIGR01784	pseudogene	gene1166	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1189
BAA_1190	BAA_1190		BAA_1190	1085675	1085833	+		conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene1167	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1190
BAA_1191	BAA_1191		BAA_1191	1085843	1086001	+		hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by glimmer%3B putative	pseudogene	gene1168	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1191
BAA_1192	BAA_1192		BAA_1192	1086051	1086245	-		hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by glimmer%3B putative	pseudogene	gene1169	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1192
BAA_1193	BAA_1193		BAA_1193	1086317	1086583	+	conserved hypothetical protein		gene	gene1170	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1193
BAA_1194	BAA_1194		BAA_1194	1086730	1086966	+		Ser/Thr protein phosphatase family protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene1171	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1194
BAA_1195	BAA_1195		BAA_1195	1086973	1087836	+		phosphoesterase%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF00149	pseudogene	gene1172	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1195
BAA_1196	BAA_1196		BAA_1196	1088052	1089029	+	HD domain protein	identified by match to protein family HMM PF01966	gene	gene1173	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1196
BAA_1197	BAA_1197		BAA_1197	1089069	1090187	-	conserved hypothetical protein		gene	gene1174	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1197
BAA_1198	BAA_1198		BAA_1198	1090193	1090678	-	RNA polymerase sigma-70 factor%2C ECF subfamily	identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937%3B match to protein family HMM TIGR02950	gene	gene1175	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1198
BAA_1199	BAA_1199		BAA_1199	1090816	1091718	+	transcriptional regulator%2C AraC family	identified by match to protein family HMM PF00165%3B match to protein family HMM PF06445	gene	gene1176	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1199
BAA_1200	BAA_1200		BAA_1200	1091778	1092143	+	conserved hypothetical protein	identified by match to protein family HMM PF00903	gene	gene1177	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1200
BAA_1201	BAA_1201		BAA_1201	1092326	1092487	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1178	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1201
BAA_1202	BAA_1202		BAA_1202	1092865	1094607	-	sensor histidine kinase	identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518	gene	gene1179	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1202
BAA_1203	BAA_1203		BAA_1203	1094617	1095321	-	DNA-binding response regulator	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486	gene	gene1180	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1203
BAA_1204	BAA_1204		BAA_1204	1095463	1096311	+	CAAX amino terminal protease family protein	identified by match to protein family HMM PF02517	gene	gene1181	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1204
BAA_1205	BAA_1205		BAA_1205	1096326	1096658	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1182	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1205
BAA_1206	BAA_1206		BAA_1206	1096798	1096989	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1183	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1206
BAA_1207	BAA_1207		BAA_1207	1097001	1097189	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1184	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1207
BAA_1208	BAA_1208		BAA_1208	1097324	1098592	+	peptidase%2C M48 family	identified by match to protein family HMM PF01435	gene	gene1185	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1208
BAA_1209	BAA_1209		BAA_1209	1098729	1100456	+	methyl-accepting chemotaxis protein	identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672	gene	gene1186	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1209
BAA_1210	BAA_1210		BAA_1210	1100669	1101577	+	transporter%2C EamA family	identified by match to protein family HMM PF00892	gene	gene1187	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1210
BAA_1211	BAA_1211		BAA_1211	1101655	1102326	+	putative S-layer protein	identified by match to protein family HMM PF00395	gene	gene1188	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1211
BAA_1212	BAA_1212		BAA_1212	1102519	1102647	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1189	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1212
BAA_1213	BAA_1213		BAA_1213	1102738	1103397	+	putative S-layer protein	identified by match to protein family HMM PF00395	gene	gene1190	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1213
BAA_1214	BAA_1214		BAA_1214	1103737	1104393	+	putative S-layer protein	identified by match to protein family HMM PF00395	gene	gene1191	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1214
BAA_1215	BAA_1215	aceB	aceB	1104577	1106166	+	malate synthase A	identified by match to protein family HMM PF01274%3B match to protein family HMM TIGR01344	gene	gene1192	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1215
BAA_1216	BAA_1216	aceA	aceA	1106190	1107467	+	isocitrate lyase	identified by match to protein family HMM PF00463%3B match to protein family HMM TIGR01346	gene	gene1193	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1216
BAA_1217	BAA_1217		BAA_1217	1107641	1108429	-	trifolitoxin immunity domain protein	identified by match to protein family HMM PF01636	gene	gene1194	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1217
BAA_1218	BAA_1218	cspA1	cspA1	1108781	1108984	+	cold shock protein CspA	identified by match to protein family HMM PF00313	gene	gene1195	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1218
BAA_1219	BAA_1219		BAA_1219	1109086	1109361	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1196	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1219
BAA_1220	BAA_1220		BAA_1220	1109387	1109572	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1197	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1220
BAA_1221	BAA_1221		BAA_1221	1109854	1110435	+	putative competence transcription factor	identified by match to protein family HMM PF06338	gene	gene1198	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1221
BAA_1222	BAA_1222		BAA_1222	1110709	1111302	+	conserved hypothetical protein	identified by match to protein family HMM PF09335	gene	gene1199	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1222
BAA_1223	BAA_1223	sipT	sipT	1111359	1111922	+	signal peptidase I	identified by match to protein family HMM PF00717%3B match to protein family HMM TIGR02227	gene	gene1200	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1223
BAA_1224	BAA_1224	addB	addB	1112039	1115554	+	ATP-dependent nuclease%2C subunit B	identified by match to protein family HMM TIGR02773	gene	gene1201	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1224
BAA_1225	BAA_1225	addA	addA	1115551	1119276	+	ATP-dependent nuclease%2C subunit A	identified by match to protein family HMM PF00580%3B match to protein family HMM TIGR02785	gene	gene1202	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1225
BAA_1226	BAA_1226		BAA_1226	1119289	1119576	+	conserved domain protein		gene	gene1203	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1226
BAA_1227	BAA_1227	gerPF1	gerPF1	1119614	1119829	-	spore germination protein GerPF		gene	gene1204	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1227
BAA_1228	BAA_1228	gerPE	gerPE	1119872	1120258	-	spore germination protein GerPE		gene	gene1205	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1228
BAA_1229	BAA_1229	gerPD	gerPD	1120274	1120468	-	spore germination protein GerPD		gene	gene1206	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1229
BAA_1230	BAA_1230	gerPC	gerPC	1120475	1121089	-	spore germination protein GerPC		gene	gene1207	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1230
BAA_1231	BAA_1231	gerPB	gerPB	1121156	1121362	-	spore germination protein GerPB		gene	gene1208	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1231
BAA_1232	BAA_1232	gerPA	gerPA	1121377	1121598	-	spore germination protein GerPA		gene	gene1209	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1232
BAA_1233	BAA_1233		BAA_1233	1121695	1121838	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF09388	pseudogene	gene1210	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1233
BAA_1234	BAA_1234		BAA_1234	1122112	1123020	+	fumarylacetoacetate hydrolase family protein	identified by match to protein family HMM PF01557	gene	gene1211	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1234
BAA_1235	BAA_1235		BAA_1235	1123056	1123340	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1212	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1235
BAA_1236	BAA_1236	rocD	rocD	1123446	1124636	-	ornithine aminotransferase	identified by match to protein family HMM PF00202%3B match to protein family HMM TIGR01885	gene	gene1213	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1236
BAA_1237	BAA_1237		BAA_1237	1124787	1125152	+	conserved hypothetical protein	identified by match to protein family HMM PF07457	gene	gene1214	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1237
BAA_1238	BAA_1238		BAA_1238	1125211	1125765	-	conserved hypothetical protein		gene	gene1215	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1238
BAA_1239	BAA_1239	asnO1	asnO1	1126004	1127851	+	asparagine synthetase%2C glutamine-hydrolyzing	identified by match to protein family HMM PF00310%3B match to protein family HMM PF00733%3B match to protein family HMM TIGR01536	gene	gene1216	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1239
BAA_1240	BAA_1240	hemH2	hemH2	1128040	1128999	+	ferrochelatase	identified by match to protein family HMM PF00762%3B match to protein family HMM TIGR00109	gene	gene1217	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1240
BAA_1241	BAA_1241	katB	katB	1129059	1130525	+	catalase	identified by match to protein family HMM PF00199	gene	gene1218	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1241
BAA_1242	BAA_1242		BAA_1242	1130800	1131735	-		ammonium transporter%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF00909%3B match to protein family HMM TIGR00836	pseudogene	gene1219	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1242
BAA_1243	BAA_1243		BAA_1243	1131805	1132032	-		ammonium transporter NrgA (Membrane protein nrgA) (Protein amtB)%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene1220	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1243
BAA_1244	BAA_1244		BAA_1244	1132251	1133546	+	alpha-amylase family protein	identified by match to protein family HMM PF00128	gene	gene1221	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1244
BAA_1245	BAA_1245		BAA_1245	1133797	1134681	+	DNA-binding protein	identified by match to protein family HMM PF01381	gene	gene1222	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1245
BAA_1246	BAA_1246		BAA_1246	1135516	1136007	-	conserved hypothetical protein	identified by match to protein family HMM PF04461	gene	gene1223	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1246
BAA_1247	BAA_1247		BAA_1247	1136247	1137101	+	conserved hypothetical protein		gene	gene1224	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1247
BAA_1248	BAA_1248		BAA_1248	1137285	1137548	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1225	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1248
BAA_1249	BAA_1249	prsA2	prsA2	1137589	1138446	-	peptidylprolyl isomerase PrsA2	identified by match to protein family HMM PF00639	gene	gene1226	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1249
BAA_1250	BAA_1250		BAA_1250	1138575	1138706	-	conserved hypothetical protein		gene	gene1227	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1250
BAA_1251	BAA_1251		BAA_1251	1138807	1139664	+	putative membrane protein	identified by match to protein family HMM PF02588	gene	gene1228	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1251
BAA_1252	BAA_1252		BAA_1252	1139690	1139887	-	conserved hypothetical protein		gene	gene1229	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1252
BAA_1253	BAA_1253		BAA_1253	1139888	1140028	-	conserved hypothetical protein		gene	gene1230	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1253
BAA_1254	BAA_1254		BAA_1254	1140134	1140943	-	hydrolase%2C haloacid dehalogenase-like family	identified by match to protein family HMM PF00702%3B match to protein family HMM PF05116%3B match to protein family HMM PF08282%3B match to protein family HMM TIGR00099%3B match to protein family HMM TIGR01484	gene	gene1231	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1254
BAA_1255	BAA_1255		BAA_1255	1141435	1141614	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1232	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1255
BAA_1256	BAA_1256	clpB	clpB	1141825	1144425	+	ATP-dependent Clp protease%2C ATP-binding subunit ClpB	identified by match to protein family HMM PF00004%3B match to protein family HMM PF02861%3B match to protein family HMM PF07724%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR03346	gene	gene1233	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1256
BAA_1257	BAA_1257		BAA_1257	1144459	1144641	-	conserved hypothetical protein		gene	gene1234	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1257
BAA_1258	BAA_1258		BAA_1258	1144798	1145532	+	conserved hypothetical protein		gene	gene1235	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1258
BAA_1259	BAA_1259		BAA_1259	1145580	1146434	+	UDP-glucose 4-epimerase-like protein	identified by match to protein family HMM PF01370	gene	gene1236	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1259
BAA_1260	BAA_1260		BAA_1260	1146440	1146664	+	conserved hypothetical protein		gene	gene1237	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1260
BAA_1261	BAA_1261	fabH	fabH	1147055	1147987	+	3-oxoacyl-(acyl-carrier-protein) synthase III	identified by match to protein family HMM PF08541%3B match to protein family HMM PF08545%3B match to protein family HMM TIGR00747	gene	gene1238	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1261
BAA_1262	BAA_1262	fabF	fabF	1148019	1149257	+	3-oxoacyl-(acyl-carrier-protein) synthase II	identified by match to protein family HMM PF00109%3B match to protein family HMM PF02801%3B match to protein family HMM TIGR03150	gene	gene1239	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1262
BAA_1263	BAA_1263		BAA_1263	1149364	1150152	+	conserved hypothetical protein		gene	gene1240	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1263
BAA_1264	BAA_1264		BAA_1264	1150295	1151041	+	conserved hypothetical protein		gene	gene1241	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1264
BAA_1265	BAA_1265	trpS	trpS	1151321	1152310	-	tryptophan--tRNA ligase	identified by match to protein family HMM PF00579%3B match to protein family HMM TIGR00233	gene	gene1242	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1265
BAA_1266	BAA_1266		BAA_1266	1152708	1153088	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1243	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1266
BAA_1267	BAA_1267		BAA_1267	1153408	1155039	+	putative oligopeptide ABC transporter%2C oligopeptide-binding protein	identified by match to protein family HMM PF00496	gene	gene1244	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1267
BAA_1268	BAA_1268		BAA_1268	1155167	1156096	+	oligopeptide ABC transporter%2C permease protein	identified by match to protein family HMM PF00528	gene	gene1245	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1268
BAA_1269	BAA_1269		BAA_1269	1156093	1157109	+	oligopeptide ABC transporter%2C permease protein	identified by match to protein family HMM PF00528	gene	gene1246	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1269
BAA_1270	BAA_1270		BAA_1270	1157128	1158171	+	oligopeptide ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727	gene	gene1247	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1270
BAA_1271	BAA_1271		BAA_1271	1158164	1159099	+	oligopeptide ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352	gene	gene1248	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1271
BAA_1272	BAA_1272		BAA_1272	1159249	1160643	-	MATE efflux family protein	identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797	gene	gene1249	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1272
BAA_1273	BAA_1273		BAA_1273	1161102	1162697	+	oligopeptide ABC transporter%2C oligopeptide-binding protein	identified by match to protein family HMM PF00496	gene	gene1250	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1273
BAA_1274	BAA_1274		BAA_1274	1162724	1162927	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1251	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1274
BAA_1275	BAA_1275		BAA_1275	1162899	1163021	+	conserved hypothetical protein		gene	gene1252	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1275
BAA_1276	BAA_1276	spx	spx	1163499	1163894	+	global transcriptional regulator Spx	identified by match to protein family HMM PF03960%3B match to protein family HMM TIGR01617	gene	gene1253	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1276
BAA_1277	BAA_1277		BAA_1277	1163944	1164618	-	putative membrane protein	identified by match to protein family HMM PF03741	gene	gene1254	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1277
BAA_1278	BAA_1278	mecA	mecA	1164945	1165628	+	negative regulator of competence MecA	identified by match to protein family HMM PF05389	gene	gene1255	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1278
BAA_1279	BAA_1279	cls2	cls2	1165701	1167245	+	cardiolipin synthetase	identified by match to protein family HMM PF00614	gene	gene1256	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1279
BAA_1280	BAA_1280		BAA_1280	1167327	1168571	+	conserved hypothetical protein	identified by match to protein family HMM PF06054	gene	gene1257	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1280
BAA_1281	BAA_1281	pepF1	pepF1	1168622	1170448	+	oligoendopeptidase F	identified by match to protein family HMM PF01432%3B match to protein family HMM PF08439%3B match to protein family HMM TIGR00181	gene	gene1258	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1281
BAA_1282	BAA_1282		BAA_1282	1170568	1170741	-	conserved hypothetical protein		gene	gene1259	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1282
BAA_1283	BAA_1283		BAA_1283	1170971	1171864	-	conserved hypothetical protein		gene	gene1260	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1283
BAA_1284	BAA_1284		BAA_1284	1171864	1172262	-	protozoan/cyanobacterial globin family protein	identified by match to protein family HMM PF01152	gene	gene1261	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1284
BAA_1285	BAA_1285		BAA_1285	1172443	1173021	-	conserved hypothetical protein	identified by match to protein family HMM PF01928	gene	gene1262	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1285
BAA_1286	BAA_1286		BAA_1286	1173168	1173527	+	conserved hypothetical protein		gene	gene1263	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1286
BAA_1287	BAA_1287		BAA_1287	1173558	1174196	+	conserved hypothetical protein	identified by match to protein family HMM PF04607	gene	gene1264	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1287
BAA_1288	BAA_1288		BAA_1288	1174215	1175012	+	putative inorganic polyphosphate/ATP-NAD kinase	identified by match to protein family HMM PF01513	gene	gene1265	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1288
BAA_1289	BAA_1289		BAA_1289	1175028	1175921	+	ribosomal large subunit pseudouridine synthase%2C RluA family	identified by match to protein family HMM PF00849%3B match to protein family HMM TIGR00005	gene	gene1266	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1289
BAA_1290	BAA_1290		BAA_1290	1175970	1176587	-	conserved hypothetical protein		gene	gene1267	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1290
BAA_1291	BAA_1291		BAA_1291	1176995	1177357	-		Hep_Hag repeat-containing protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1268	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1291
BAA_1292	BAA_1292		BAA_1292	1177498	1178238	-	Ser/Thr protein phosphatase family protein	identified by match to protein family HMM PF00149	gene	gene1269	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1292
BAA_1293	BAA_1293		BAA_1293	1178313	1178552	-		cell cycle protein%2C FtsW/RodA/SpoVE family%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1270	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1293
BAA_1294	BAA_1294		BAA_1294	1178549	1179472	-		division protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01098	pseudogene	gene1271	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1294
BAA_1295	BAA_1295		BAA_1295	1179615	1180550	-	glycosyl transferase%2C group 2 family	identified by match to protein family HMM PF00535	gene	gene1272	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1295
BAA_1296	BAA_1296		BAA_1296	1180557	1181324	-	conserved hypothetical protein	identified by match to protein family HMM PF08241%3B match to protein family HMM PF08242	gene	gene1273	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1296
BAA_1297	BAA_1297		BAA_1297	1181452	1182297	-	putative bacteriocin O-metyltransferase	identified by match to protein family HMM PF05711	gene	gene1274	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1297
BAA_1298	BAA_1298	bclA	bclA	1182420	1182602	-	BclA protein		gene	gene1275	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1298
BAA_1299	BAA_1299		BAA_1299	1182946	1183554	+	male specific sperm protein		gene	gene1276	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1299
BAA_1300	BAA_1300		BAA_1300	1183734	1184846	+	glycosyl transferase%2C group 2 family	identified by match to protein family HMM PF00535	gene	gene1277	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1300
BAA_1301	BAA_1301		BAA_1301	1184984	1185673	+	conserved hypothetical protein	identified by match to protein family HMM PF08241%3B match to protein family HMM PF08242	gene	gene1278	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1301
BAA_1302	BAA_1302		BAA_1302	1185670	1186356	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1279	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1302
BAA_1303	BAA_1303		BAA_1303	1186369	1187049	+	streptomycin biosynthesis StrF domain protein		gene	gene1280	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1303
BAA_1304	BAA_1304		BAA_1304	1187064	1187801	+	putative glucose-1-phosphate thymidylyltransferase	identified by match to protein family HMM PF00483	gene	gene1281	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1304
BAA_1305	BAA_1305	rfbC	rfbC	1187810	1188355	+	dTDP-4-dehydrorhamnose 3%2C5-epimerase	identified by match to protein family HMM PF00908%3B match to protein family HMM TIGR01221	gene	gene1282	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1305
BAA_1306	BAA_1306	rfbB	rfbB	1188372	1189340	+	dTDP-glucose 4%2C6-dehydratase	identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF04321%3B match to protein family HMM PF07993%3B match to protein family HMM TIGR01181	gene	gene1283	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1306
BAA_1307	BAA_1307	rfbD	rfbD	1189352	1190206	+	dTDP-4-dehydrorhamnose reductase	identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF04321%3B match to protein family HMM PF07993%3B match to protein family HMM TIGR01214	gene	gene1284	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1307
BAA_1308	BAA_1308	fabI	fabI	1190315	1191085	+	enoyl-(acyl-carrier-protein) reductase		gene	gene1285	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1308
BAA_1309	BAA_1309		BAA_1309	1191247	1191774	+	conserved hypothetical protein		gene	gene1286	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1309
BAA_1310	BAA_1310	cotZ1	cotZ1	1191835	1192293	-	spore coat protein Z		gene	gene1287	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1310
BAA_1311	BAA_1311		BAA_1311	1192418	1192777	+	conserved hypothetical protein	identified by match to protein family HMM PF07098	gene	gene1288	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1311
BAA_1312	BAA_1312		BAA_1312	1192888	1193064	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1289	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1312
BAA_1313	BAA_1313		BAA_1313	1193143	1193646	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1290	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1313
BAA_1314	BAA_1314	cotZ2	cotZ2	1193814	1194284	-	spore coat protein Z		gene	gene1291	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1314
BAA_1315	BAA_1315		BAA_1315	1194427	1196493	-	ATP-dependent DNA helicase%2C UvrD/REP family	identified by match to protein family HMM PF00580	gene	gene1292	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1315
BAA_1316	BAA_1316		BAA_1316	1196593	1197015	-	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene1293	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1316
BAA_1317	BAA_1317		BAA_1317	1197017	1197535	-	conserved hypothetical protein	identified by match to protein family HMM PF02834	gene	gene1294	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1317
BAA_1318	BAA_1318		BAA_1318	1197628	1198359	-	conserved hypothetical protein	identified by match to protein family HMM PF00756	gene	gene1295	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1318
BAA_1319	BAA_1319		BAA_1319	1198563	1199474	+	putative membrane protein	identified by match to protein family HMM PF00892	gene	gene1296	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1319
BAA_1320	BAA_1320		BAA_1320	1199623	1200018	+	putative lipoprotein	identified by match to protein family HMM PF06713	gene	gene1297	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1320
BAA_1321	BAA_1321		BAA_1321	1200043	1200441	-	conserved domain protein		gene	gene1298	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1321
BAA_1322	BAA_1322		BAA_1322	1200712	1202190	-	sodium/proline symporter family protein	identified by match to protein family HMM PF00474%3B match to protein family HMM TIGR00813%3B match to protein family HMM TIGR02121	gene	gene1299	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1322
BAA_1323	BAA_1323		BAA_1323	1202567	1202704	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1300	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1323
BAA_1324	BAA_1324	trpE	trpE	1203074	1204492	+	anthranilate synthase component I	identified by match to protein family HMM PF00425%3B match to protein family HMM PF04715%3B match to protein family HMM TIGR00564	gene	gene1301	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1324
BAA_1325	BAA_1325		BAA_1325	1204489	1205076	+	anthranilate synthase%2C glutamine amidotransferase component	identified by match to protein family HMM PF00117%3B match to protein family HMM TIGR00566	gene	gene1302	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1325
BAA_1326	BAA_1326	trpD	trpD	1205073	1206098	+	anthranilate phosphoribosyltransferase	identified by match to protein family HMM PF00591%3B match to protein family HMM PF02885%3B match to protein family HMM TIGR01245	gene	gene1303	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1326
BAA_1327	BAA_1327		BAA_1327	1206100	1206861	+	indole-3-glycerol phosphate synthase	identified by match to protein family HMM PF00218	gene	gene1304	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1327
BAA_1328	BAA_1328	trpF	trpF	1206858	1207472	+	N-(5'phosphoribosyl)anthranilate isomerase	identified by match to protein family HMM PF00697	gene	gene1305	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1328
BAA_1329	BAA_1329	trpB	trpB	1207469	1208662	+	tryptophan synthase%2C beta subunit	identified by match to protein family HMM PF00291%3B match to protein family HMM TIGR00263	gene	gene1306	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1329
BAA_1330	BAA_1330	trpA	trpA	1208666	1209442	+	tryptophan synthase%2C alpha subunit	identified by match to protein family HMM PF00290%3B match to protein family HMM TIGR00262	gene	gene1307	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1330
BAA_1331	BAA_1331		BAA_1331	1209517	1209876	+	conserved domain protein		gene	gene1308	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1331
BAA_1332	BAA_1332		BAA_1332	1209991	1211490	+	putative L-lactate permease		gene	gene1309	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1332
BAA_1333	BAA_1333		BAA_1333	1211582	1212265	+	conserved hypothetical protein		gene	gene1310	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1333
BAA_1334	BAA_1334		BAA_1334	1212280	1213113	-	putative membrane protein		gene	gene1311	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1334
BAA_1335	BAA_1335		BAA_1335	1213310	1214095	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1312	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1335
BAA_1336	BAA_1336		BAA_1336	1214444	1214875	-	group-specific protein		gene	gene1313	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1336
BAA_1337	BAA_1337		BAA_1337	1215073	1216407	+	pyridine nucleotide-disulfide oxidoreductase%2C class I	identified by match to protein family HMM PF00070%3B match to protein family HMM PF02852%3B match to protein family HMM PF07992	gene	gene1314	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1337
BAA_1338	BAA_1338		BAA_1338	1216509	1217000	+	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene1315	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1338
BAA_1339	BAA_1339		BAA_1339	1217145	1217555	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1316	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1339
BAA_1340	BAA_1340		BAA_1340	1217587	1219128	-	conserved hypothetical protein	identified by match to protein family HMM TIGR03605	gene	gene1317	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1340
BAA_1341	BAA_1341		BAA_1341	1219145	1221094	-	conserved domain protein	identified by match to protein family HMM PF02624%3B match to protein family HMM TIGR03604	gene	gene1318	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1341
BAA_1342	BAA_1342		BAA_1342	1221091	1223010	-	putative thiazole-containing bacteriocin maturation protein	identified by match to protein family HMM TIGR03693	gene	gene1319	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1342
BAA_1343	BAA_1343	odhB	odhB	1223135	1224391	-	2-oxoglutarate dehydrogenase%2C E2 component%2C dihydrolipoamide succinyltransferase	identified by match to protein family HMM PF00198%3B match to protein family HMM PF00364%3B match to protein family HMM PF02817%3B match to protein family HMM TIGR01347	gene	gene1320	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1343
BAA_1344	BAA_1344	odhA	odhA	1224527	1227394	-	2-oxoglutarate dehydrogenase%2C E1 component	identified by match to protein family HMM PF00676%3B match to protein family HMM PF02779%3B match to protein family HMM TIGR00239	gene	gene1321	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1344
BAA_1345	BAA_1345		BAA_1345	1228220	1228429	+	DNA-binding protein	identified by match to protein family HMM PF01381	gene	gene1322	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1345
BAA_1346	BAA_1346		BAA_1346	1228432	1228809	+	conserved hypothetical protein		gene	gene1323	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1346
BAA_1347	BAA_1347		BAA_1347	1228838	1229020	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1324	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1347
BAA_1348	BAA_1348		BAA_1348	1229155	1229514	+	conserved hypothetical protein		gene	gene1325	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1348
BAA_1349	BAA_1349		BAA_1349	1229955	1230359	+	conserved domain protein		gene	gene1326	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1349
BAA_1350	BAA_1350		BAA_1350	1230494	1231363	+	conserved domain protein	identified by match to protein family HMM PF06013	gene	gene1327	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1350
BAA_1351	BAA_1351		BAA_1351	1231381	1231563	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1328	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1351
BAA_1352	BAA_1352		BAA_1352	1231601	1231849	+	conserved hypothetical protein		gene	gene1329	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1352
BAA_1353	BAA_1353		BAA_1353	1232497	1232572	-	tRNA-Val		tRNA	gene1330	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1353
BAA_1354	BAA_1354		BAA_1354	1232761	1232985	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1331	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1354
BAA_1355	BAA_1355		BAA_1355	1233263	1234018	-	conserved hypothetical protein	identified by match to protein family HMM PF08241%3B match to protein family HMM PF08242	gene	gene1332	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1355
BAA_1356	BAA_1356		BAA_1356	1234384	1234611	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1333	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1356
BAA_1357	BAA_1357		BAA_1357	1234767	1236053	+	D-alanyl-D-alanine carboxypeptidase family protein	identified by match to protein family HMM PF00768	gene	gene1334	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1357
BAA_1358	BAA_1358	sipW	sipW	1236248	1236817	+	signal peptidase I	identified by match to protein family HMM PF00717%3B match to protein family HMM TIGR02228	gene	gene1335	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1358
BAA_1359	BAA_1359		BAA_1359	1236880	1237467	+	spore coat-associated protein		gene	gene1336	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1359
BAA_1360	BAA_1360		BAA_1360	1237629	1238393	+	conserved hypothetical protein		gene	gene1337	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1360
BAA_1361	BAA_1361	calY	calY	1238791	1239384	+	camelysin		gene	gene1338	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1361
BAA_1362	BAA_1362	sinR	sinR	1239460	1239783	-	transcriptional regulator SinR	identified by match to protein family HMM PF01381%3B match to protein family HMM PF08671	gene	gene1339	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1362
BAA_1363	BAA_1363		BAA_1363	1240341	1242728	+	immune inhibitor A metalloprotease InhA1	identified by match to protein family HMM PF05547%3B match to protein family HMM TIGR03296	gene	gene1340	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1363
BAA_1364	BAA_1364		BAA_1364	1242900	1244267	+	aldehyde dehydrogenase (NAD) family protein	identified by match to protein family HMM PF00171	gene	gene1341	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1364
BAA_1365	BAA_1365	potA	potA	1244494	1245489	+	spermidine/putrescine ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005%3B match to protein family HMM PF08402%3B match to protein family HMM TIGR01187	gene	gene1342	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1365
BAA_1366	BAA_1366	potB	potB	1245486	1246334	+	spermidine/putrescine ABC transporter%2C permease protein	identified by match to protein family HMM PF00528	gene	gene1343	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1366
BAA_1367	BAA_1367	potC	potC	1246341	1247141	+		spermidine/putrescine ABC transporter%2C permease protein%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF00528	pseudogene	gene1344	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1367
BAA_1368	BAA_1368	potD	potD	1247180	1248217	+	spermidine/putrescine ABC transporter%2C spermidine/putrescine-binding protein	identified by match to protein family HMM PF01547	gene	gene1345	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1368
BAA_1369	BAA_1369		BAA_1369	1248277	1248924	+	PAP2 family protein	identified by match to protein family HMM PF01569	gene	gene1346	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1369
BAA_1370	BAA_1370		BAA_1370	1249035	1251227	+	putative transporter		gene	gene1347	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1370
BAA_1371	BAA_1371		BAA_1371	1251328	1251744	+	conserved hypothetical protein		gene	gene1348	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1371
BAA_1372	BAA_1372		BAA_1372	1251843	1252766	+	ribosomal large subunit pseudouridine synthase%2C RluA family	identified by match to protein family HMM PF00849%3B match to protein family HMM TIGR00005	gene	gene1349	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1372
BAA_1373	BAA_1373		BAA_1373	1252858	1253463	+	putative membrane protein	identified by match to protein family HMM PF07853	gene	gene1350	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1373
BAA_1374	BAA_1374		BAA_1374	1253504	1254331	-	conserved hypothetical protein	identified by match to protein family HMM PF00188%3B match to protein family HMM TIGR02909	gene	gene1351	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1374
BAA_1375	BAA_1375		BAA_1375	1254797	1256125	-	putative glycolate oxidase%2C iron-sulfur subunit	identified by match to protein family HMM PF02754	gene	gene1352	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1375
BAA_1376	BAA_1376	glcD	glcD	1256122	1257534	-	glycolate oxidase%2C subunit GlcD	identified by match to protein family HMM PF01565%3B match to protein family HMM PF02913%3B match to protein family HMM TIGR00387	gene	gene1353	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1376
BAA_1377	BAA_1377		BAA_1377	1257652	1258767	-	putative carbohydrate diacid regulator	identified by match to protein family HMM PF05651	gene	gene1354	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1377
BAA_1378	BAA_1378		BAA_1378	1258904	1259878	+	putative lipoprotein	identified by match to protein family HMM TIGR02276	gene	gene1355	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1378
BAA_1379	BAA_1379		BAA_1379	1259871	1260542	+	DNA-binding response regulator	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486	gene	gene1356	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1379
BAA_1380	BAA_1380		BAA_1380	1260546	1261946	+	sensor histidine kinase	identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518	gene	gene1357	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1380
BAA_1381	BAA_1381		BAA_1381	1262207	1262863	+	transcriptional regulator%2C GntR family	identified by match to protein family HMM PF00392%3B match to protein family HMM PF07729	gene	gene1358	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1381
BAA_1382	BAA_1382		BAA_1382	1263031	1263750	+	conserved hypothetical protein	identified by match to protein family HMM PF02754	gene	gene1359	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1382
BAA_1383	BAA_1383		BAA_1383	1263767	1265188	+	iron-sulfur cluster-binding protein	identified by match to protein family HMM PF02589%3B match to protein family HMM TIGR00273	gene	gene1360	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1383
BAA_1384	BAA_1384		BAA_1384	1265188	1265898	+	ykgG family protein	identified by match to protein family HMM PF02589	gene	gene1361	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1384
BAA_1385	BAA_1385	comC	comC	1266011	1266733	+	late competence protein comC	identified by match to protein family HMM PF01478%3B match to protein family HMM PF06750	gene	gene1362	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1385
BAA_1386	BAA_1386		BAA_1386	1266748	1266897	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1363	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1386
BAA_1387	BAA_1387		BAA_1387	1266876	1267058	+		group-specific protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1364	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1387
BAA_1388	BAA_1388		BAA_1388	1267085	1267936	-	formate/nitrite transporter family protein	identified by match to protein family HMM PF01226	gene	gene1365	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1388
BAA_1389	BAA_1389		BAA_1389	1268140	1268934	-	membrane protein%2C TerC family	identified by match to protein family HMM PF03741	gene	gene1366	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1389
BAA_1391	BAA_1391		BAA_1391	1269229	1270548	-	potassium uptake protein%2C TrkH family	identified by match to protein family HMM PF02386%3B match to protein family HMM TIGR00933	gene	gene1367	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1391
BAA_1392	BAA_1392		BAA_1392	1270663	1270848	-	small%2C acid-soluble spore protein%2C alpha/beta family	identified by match to protein family HMM PF00269	gene	gene1368	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1392
BAA_1393	BAA_1393		BAA_1393	1270996	1271439	-	maoC family protein	identified by match to protein family HMM PF01575	gene	gene1369	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1393
BAA_1394	BAA_1394		BAA_1394	1271541	1272065	-	phaP protein	identified by match to protein family HMM PF09602%3B match to protein family HMM TIGR02131	gene	gene1370	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1394
BAA_1395	BAA_1395		BAA_1395	1272108	1272560	-	transcriptional regulator%2C PadR family	identified by match to protein family HMM PF03551%3B match to protein family HMM TIGR02719	gene	gene1371	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1395
BAA_1396	BAA_1396		BAA_1396	1272759	1273241	+	phaR protein	identified by match to protein family HMM TIGR02132	gene	gene1372	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1396
BAA_1397	BAA_1397	phbB	phbB	1273391	1274134	+	acetoacetyl-CoA reductase	identified by match to protein family HMM PF00106%3B match to protein family HMM PF08659%3B match to protein family HMM TIGR01829	gene	gene1373	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1397
BAA_1398	BAA_1398	phaC	phaC	1274217	1275302	+	poly(R)-hydroxyalkanoic acid synthase%2C class III%2C PhaC subunit	identified by match to protein family HMM PF00561%3B match to protein family HMM TIGR01836	gene	gene1374	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1398
BAA_1399	BAA_1399		BAA_1399	1275398	1276591	+	conserved hypothetical protein	identified by match to protein family HMM PF01266	gene	gene1375	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1399
BAA_1400	BAA_1400		BAA_1400	1276615	1277964	+	sodium transporter family protein	identified by match to protein family HMM PF02386	gene	gene1376	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1400
BAA_1401	BAA_1401		BAA_1401	1278003	1278338	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1377	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1401
BAA_1402	BAA_1402		BAA_1402	1278487	1278639	+	conserved hypothetical protein		gene	gene1378	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1402
BAA_1403	BAA_1403		BAA_1403	1278868	1279944	+	putative iron compound ABC transporter%2C iron compound-binding protein	identified by match to protein family HMM PF01547%3B match to protein family HMM TIGR03261	gene	gene1379	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1403
BAA_1404	BAA_1404		BAA_1404	1280099	1280353	+		Fe(3+) ions import ATP-binding protein FbpC%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1380	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1404
BAA_1405	BAA_1405		BAA_1405	1280340	1280966	+		ABC transporter%2C ATP-binding protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00005	pseudogene	gene1381	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1405
BAA_1406	BAA_1406		BAA_1406	1281065	1282723	+		putative iron compound ABC transporter%2C permease protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR03262	pseudogene	gene1382	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1406
BAA_1407	BAA_1407	phnX	phnX	1282736	1283539	+	phosphonoacetaldehyde phosphonohydrolase	identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01422%3B match to protein family HMM TIGR01509%3B match to protein family HMM TIGR01549	gene	gene1383	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1407
BAA_1408	BAA_1408		BAA_1408	1283555	1284652	+	aminotransferase%2C class V	identified by match to protein family HMM PF00266%3B match to protein family HMM TIGR02326%3B match to protein family HMM TIGR03301	gene	gene1384	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1408
BAA_1409	BAA_1409		BAA_1409	1284649	1285833	+	conserved hypothetical protein	identified by match to protein family HMM PF03435	gene	gene1385	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1409
BAA_1410	BAA_1410		BAA_1410	1285874	1286656	+	transcriptional regulator%2C DeoR family	identified by match to protein family HMM PF00455%3B match to protein family HMM PF08220%3B match to protein family HMM PF08279	gene	gene1386	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1410
BAA_1411	BAA_1411		BAA_1411	1286818	1286937	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1387	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1411
BAA_1412	BAA_1412		BAA_1412	1287093	1287335	+		putative internalin%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1388	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1412
BAA_1413	BAA_1413		BAA_1413	1287325	1287765	+		S-layer protein%2C fragment%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF05031	pseudogene	gene1389	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1413
BAA_1414	BAA_1414		BAA_1414	1287794	1289374	+		internalin%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00395	pseudogene	gene1390	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1414
BAA_1415	BAA_1415		BAA_1415	1289660	1290070	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1391	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1415
BAA_1416	BAA_1416		BAA_1416	1290064	1290249	+		conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1392	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1416
BAA_1417	BAA_1417		BAA_1417	1290375	1290998	+	CBS domain protein	identified by match to protein family HMM PF00571	gene	gene1393	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1417
BAA_1418	BAA_1418		BAA_1418	1291066	1291836	-	conserved hypothetical protein	identified by match to protein family HMM PF04748	gene	gene1394	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1418
BAA_1419	BAA_1419		BAA_1419	1292176	1292457	+	stage 0 sporulation regulatory protein	identified by match to protein family HMM PF09388	gene	gene1395	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1419
BAA_1420	BAA_1420		BAA_1420	1292487	1293929	-	sensor histidine kinase KinD	identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518	gene	gene1396	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1420
BAA_1421	BAA_1421		BAA_1421	1294174	1294620	+	transcriptional regulator%2C MarR family	identified by match to protein family HMM PF01047	gene	gene1397	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1421
BAA_1422	BAA_1422		BAA_1422	1294781	1296475	+	putative oligoendopeptidase F	identified by match to protein family HMM PF01432%3B match to protein family HMM TIGR02289	gene	gene1398	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1422
BAA_1423	BAA_1423		BAA_1423	1296614	1297147	+	conserved hypothetical protein		gene	gene1399	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1423
BAA_1424	BAA_1424		BAA_1424	1297250	1297366	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1400	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1424
BAA_1425	BAA_1425	kinB1	kinB1	1297378	1298586	-	sporulation kinase B	identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518	gene	gene1401	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1425
BAA_1427	BAA_1427		BAA_1427	1298931	1299593	+	exsB protein	identified by match to protein family HMM PF06508%3B match to protein family HMM TIGR00364	gene	gene1402	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1427
BAA_1428	BAA_1428		BAA_1428	1299593	1300084	+	putative 6-pyruvoyl tetrahydrobiopterin synthase	identified by match to protein family HMM PF01242%3B match to protein family HMM TIGR03367	gene	gene1403	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1428
BAA_1429	BAA_1429	queE	queE	1300077	1300793	+	7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR03365	gene	gene1404	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1429
BAA_1430	BAA_1430		BAA_1430	1300812	1301309	+	conserved hypothetical protein	identified by match to protein family HMM PF01227%3B match to protein family HMM TIGR03139	gene	gene1405	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1430
BAA_1431	BAA_1431		BAA_1431	1301365	1301550	-	conserved domain protein		gene	gene1406	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1431
BAA_1432	BAA_1432		BAA_1432	1301808	1301966	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1407	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1432
BAA_1433	BAA_1433		BAA_1433	1302055	1302657	+	conserved hypothetical protein		gene	gene1408	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1433
BAA_1434	BAA_1434		BAA_1434	1302693	1303271	-	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene1409	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1434
BAA_1435	BAA_1435		BAA_1435	1303517	1303711	+	conserved hypothetical protein		gene	gene1410	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1435
BAA_1436	BAA_1436		BAA_1436	1303738	1304055	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1411	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1436
BAA_1437	BAA_1437	nrdI	nrdI	1304532	1304891	+	nrdI protein	identified by match to protein family HMM PF07972%3B match to protein family HMM TIGR00333	gene	gene1412	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1437
BAA_1438	BAA_1438		BAA_1438	1304914	1305645	+	ribonucleoside-diphosphate reductase subunit alpha (Ribonucleotide reductase)	identified by match to protein family HMM PF00317	gene	gene1413	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1438
BAA_1439	BAA_1439		BAA_1439	1305886	1306647	+	group I intron GIY-YIG endonuclease	identified by match to protein family HMM PF01541%3B match to protein family HMM PF07460%3B match to protein family HMM TIGR01453	gene	gene1414	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1439
BAA_1440	BAA_1440	nrdE	nrdE	1306742	1308064	+	ribonucleoside-diphosphate reductase%2C alpha subunit%2C group I intron-containing	identified by match to protein family HMM PF02867	gene	gene1415	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1440
BAA_1441	BAA_1441	nrdF	nrdF	1308158	1309126	+	ribonucleoside-diphosphate reductase%2C beta subunit	identified by match to protein family HMM PF00268	gene	gene1416	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1441
BAA_1442	BAA_1442		BAA_1442	1309343	1309723	+	transcriptional regulator%2C GntR family	identified by match to protein family HMM PF00392	gene	gene1417	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1442
BAA_1443	BAA_1443		BAA_1443	1309720	1310418	+	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene1418	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1443
BAA_1444	BAA_1444		BAA_1444	1310415	1311209	+	putative ABC transporter%2C permease protein		gene	gene1419	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1444
BAA_1445	BAA_1445		BAA_1445	1311224	1312126	+	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene1420	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1445
BAA_1446	BAA_1446		BAA_1446	1312126	1312902	+	putative ABC transporter%2C permease protein		gene	gene1421	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1446
BAA_1447	BAA_1447		BAA_1447	1313105	1314118	+	transcriptional regulator%2C AbrB family	identified by match to protein family HMM PF02517	gene	gene1422	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1447
BAA_1448	BAA_1448		BAA_1448	1314148	1314330	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1423	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1448
BAA_1449	BAA_1449		BAA_1449	1314431	1314883	-	transcriptional regulator%2C AsnC family	identified by match to protein family HMM PF01037	gene	gene1424	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1449
BAA_1450	BAA_1450		BAA_1450	1315010	1315438	+	conserved hypothetical protein		gene	gene1425	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1450
BAA_1451	BAA_1451		BAA_1451	1315431	1315985	+	isochorismatase family protein	identified by match to protein family HMM PF00857	gene	gene1426	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1451
BAA_1452	BAA_1452		BAA_1452	1316072	1316470	+	conserved domain protein		gene	gene1427	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1452
BAA_1453	BAA_1453		BAA_1453	1316498	1317418	-	conserved hypothetical protein	identified by match to protein family HMM PF02016	gene	gene1428	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1453
BAA_1454	BAA_1454		BAA_1454	1317531	1318628	+	2-nitropropane dioxygenase	identified by match to protein family HMM PF01180%3B match to protein family HMM PF03060	gene	gene1429	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1454
BAA_1455	BAA_1455	dltD	dltD	1318646	1319821	-	D-alanyl-lipoteichoic acid biosynthesis protein DltD	identified by match to protein family HMM PF04914%3B match to protein family HMM PF04915%3B match to protein family HMM PF04918	gene	gene1430	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1455
BAA_1456	BAA_1456	dltC	dltC	1319818	1320057	-	D-alanine--poly(phosphoribitol) ligase%2C subunit 2	identified by match to protein family HMM TIGR01688	gene	gene1431	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1456
BAA_1457	BAA_1457	dltB	dltB	1320126	1321292	-	D-alanyl-lipoteichoic acid biosynthesis protein DltB	identified by match to protein family HMM PF03062	gene	gene1432	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1457
BAA_1458	BAA_1458	dltA	dltA	1321289	1322800	-	D-alanine--poly(phosphoribitol) ligase%2C subunit 1	identified by match to protein family HMM PF00501%3B match to protein family HMM TIGR01733%3B match to protein family HMM TIGR01734	gene	gene1433	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1458
BAA_1459	BAA_1459		BAA_1459	1322813	1322959	-	conserved hypothetical protein		gene	gene1434	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1459
BAA_1460	BAA_1460	amaA	amaA	1323297	1324466	+	aminoacylase	identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01891	gene	gene1435	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1460
BAA_1461	BAA_1461		BAA_1461	1324693	1324869	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1436	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1461
BAA_1462	BAA_1462		BAA_1462	1324862	1325308	+	flavodoxin	identified by match to protein family HMM PF00258%3B match to protein family HMM TIGR01753	gene	gene1437	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1462
BAA_1463	BAA_1463		BAA_1463	1325333	1326106	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1438	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1463
BAA_1464	BAA_1464		BAA_1464	1326206	1326367	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1439	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1464
BAA_1465	BAA_1465		BAA_1465	1326370	1327272	-	aminoglycoside phophotransferase family protein	identified by match to protein family HMM PF01636	gene	gene1440	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1465
BAA_1466	BAA_1466		BAA_1466	1327356	1327874	+	transcriptional regulator%2C Bla/Mec family		gene	gene1441	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1466
BAA_1467	BAA_1467		BAA_1467	1327939	1328088	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1442	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1467
BAA_1468	BAA_1468		BAA_1468	1328107	1328280	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1443	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1468
BAA_1469	BAA_1469		BAA_1469	1328354	1329715	-	MATE efflux family protein	identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797	gene	gene1444	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1469
BAA_1470	BAA_1470	bacA2	bacA2	1329898	1330689	+	bacitracin resistance protein	identified by match to protein family HMM PF02673%3B match to protein family HMM TIGR00753	gene	gene1445	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1470
BAA_1471	BAA_1471		BAA_1471	1330719	1331273	-	conserved hypothetical protein		gene	gene1446	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1471
BAA_1472	BAA_1472		BAA_1472	1331340	1331771	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1447	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1472
BAA_1473	BAA_1473		BAA_1473	1331958	1332353	+		transcriptional regulator%2C MarR family%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF01047	pseudogene	gene1448	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1473
BAA_1474	BAA_1474		BAA_1474	1332490	1332645	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1449	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1474
BAA_1475	BAA_1475		BAA_1475	1332668	1333903	-	proton/glutamate symporter family protein	identified by match to protein family HMM PF00375	gene	gene1450	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1475
BAA_1476	BAA_1476		BAA_1476	1335099	1336442	+	potassium uptake protein%2C TrkH family	identified by match to protein family HMM PF02386%3B match to protein family HMM TIGR00933	gene	gene1451	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1476
BAA_1477	BAA_1477		BAA_1477	1336476	1336841	-	conserved hypothetical protein		gene	gene1452	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1477
BAA_1478	BAA_1478		BAA_1478	1337074	1337541	+	conserved hypothetical protein	identified by match to protein family HMM PF09579%3B match to protein family HMM TIGR02874	gene	gene1453	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1478
BAA_1479	BAA_1479		BAA_1479	1337626	1337739	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1454	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1479
BAA_1480	BAA_1480		BAA_1480	1338092	1338340	-	conserved hypothetical protein	identified by match to protein family HMM PF03698	gene	gene1455	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1480
BAA_1481	BAA_1481		BAA_1481	1338458	1338697	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1456	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1481
BAA_1482	BAA_1482		BAA_1482	1338757	1338993	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1457	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1482
BAA_1483	BAA_1483	ilvE1	ilvE1	1339113	1340009	+	branched-chain-amino-acid transaminase	identified by match to protein family HMM PF01063%3B match to protein family HMM TIGR01122	gene	gene1458	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1483
BAA_1484	BAA_1484	ilvB	ilvB	1340316	1342025	+	acetolactate synthase%2C large subunit%2C biosynthetic type	identified by match to protein family HMM PF00205%3B match to protein family HMM PF02775%3B match to protein family HMM PF02776%3B match to protein family HMM TIGR00118	gene	gene1459	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1484
BAA_1485	BAA_1485	ilvN	ilvN	1342022	1342531	+	acetolactate synthase%2C small subunit	identified by match to protein family HMM PF01842%3B match to protein family HMM TIGR00119	gene	gene1460	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1485
BAA_1486	BAA_1486	ilvC1	ilvC1	1342558	1343568	+	ketol-acid reductoisomerase	identified by match to protein family HMM PF01450%3B match to protein family HMM PF02629%3B match to protein family HMM PF07991%3B match to protein family HMM TIGR00465	gene	gene1461	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1486
BAA_1487	BAA_1487	leuA	leuA	1343570	1345090	+	2-isopropylmalate synthase	identified by match to protein family HMM PF00682%3B match to protein family HMM PF08502%3B match to protein family HMM TIGR00973	gene	gene1462	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1487
BAA_1488	BAA_1488	leuB	leuB	1345168	1346232	+	3-isopropylmalate dehydrogenase	identified by match to protein family HMM PF00180%3B match to protein family HMM TIGR00169	gene	gene1463	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1488
BAA_1489	BAA_1489	leuC	leuC	1346232	1347626	+	3-isopropylmalate dehydratase%2C large subunit	identified by match to protein family HMM PF00330%3B match to protein family HMM TIGR00170	gene	gene1464	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1489
BAA_1490	BAA_1490	leuD	leuD	1347604	1348185	+	3-isopropylmalate dehydratase%2C small subunit	identified by match to protein family HMM PF00694%3B match to protein family HMM TIGR00171	gene	gene1465	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1490
BAA_1491	BAA_1491	hisZ	hisZ	1348496	1349758	+	ATP phosphoribosyltransferase%2C regulatory subunit	identified by match to protein family HMM PF00587%3B match to protein family HMM TIGR00443	gene	gene1466	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1491
BAA_1492	BAA_1492	hisG	hisG	1349734	1350369	+	ATP phosphoribosyltransferase	identified by match to protein family HMM PF01634%3B match to protein family HMM TIGR00070	gene	gene1467	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1492
BAA_1493	BAA_1493	hisD	hisD	1350381	1351670	+	histidinol dehydrogenase	identified by match to protein family HMM PF00815%3B match to protein family HMM TIGR00069	gene	gene1468	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1493
BAA_1494	BAA_1494	hisB	hisB	1351670	1352254	+	imidazoleglycerol-phosphate dehydratase	identified by match to protein family HMM PF00475	gene	gene1469	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1494
BAA_1495	BAA_1495	hisH	hisH	1352255	1352884	+	imidazole glycerol phosphate synthase%2C glutamine amidotransferase	identified by match to protein family HMM PF00117%3B match to protein family HMM PF07685%3B match to protein family HMM TIGR01855	gene	gene1470	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1495
BAA_1496	BAA_1496	hisA	hisA	1352857	1353576	+	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase	identified by match to protein family HMM PF00977%3B match to protein family HMM TIGR00007	gene	gene1471	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1496
BAA_1497	BAA_1497	hisF	hisF	1353570	1354328	+	imidazoleglycerol phosphate synthase%2C cyclase subunit	identified by match to protein family HMM PF00977%3B match to protein family HMM TIGR00735	gene	gene1472	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1497
BAA_1498	BAA_1498	hisE	hisE	1354325	1354630	+		phosphoribosyl-ATP diphosphatase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01502	pseudogene	gene1473	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1498
BAA_1499	BAA_1499	hisI	hisI	1354641	1354964	+	phosphoribosyl-ATP pyrophosphohydrolase	identified by match to protein family HMM PF01503%3B match to protein family HMM PF03819%3B match to protein family HMM TIGR03188	gene	gene1474	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1499
BAA_1500	BAA_1500		BAA_1500	1354976	1355992	+	putative histidinol phosphatase	identified by match to protein family HMM PF02811%3B match to protein family HMM TIGR01856	gene	gene1475	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1500
BAA_1501	BAA_1501		BAA_1501	1356060	1356227	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1476	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1501
BAA_1502	BAA_1502		BAA_1502	1356326	1357345	+	D-isomer specific 2-hydroxyacid dehydrogenase family protein	identified by match to protein family HMM PF00389%3B match to protein family HMM PF02826	gene	gene1477	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1502
BAA_1503	BAA_1503		BAA_1503	1357378	1358079	-	putative CDP-diacylglycerol--serine O-phosphatidyltransferase	identified by match to protein family HMM PF01066%3B match to protein family HMM TIGR00473	gene	gene1478	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1503
BAA_1504	BAA_1504		BAA_1504	1358261	1360147	-	arylsulfatase	identified by match to protein family HMM PF00884	gene	gene1479	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1504
BAA_1505	BAA_1505		BAA_1505	1360492	1360791	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1480	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1505
BAA_1507	BAA_1507	lysA	lysA	1361248	1362564	+	diaminopimelate decarboxylase	identified by match to protein family HMM PF00278%3B match to protein family HMM PF02784%3B match to protein family HMM TIGR01048	gene	gene1481	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1507
BAA_1509	BAA_1509		BAA_1509	1362861	1363004	+	conserved hypothetical protein		gene	gene1482	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1509
BAA_1510	BAA_1510	cysH	cysH	1363091	1363771	+	phosphoadenylyl-sulfate reductase (thioredoxin)	identified by match to protein family HMM PF01507%3B match to protein family HMM TIGR00434%3B match to protein family HMM TIGR02055	gene	gene1483	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1510
BAA_1511	BAA_1511	sat	sat	1363810	1364946	+	sulfate adenylyltransferase	identified by match to protein family HMM PF01747%3B match to protein family HMM TIGR00339	gene	gene1484	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1511
BAA_1512	BAA_1512	cysC	cysC	1364959	1365552	+	adenylyl-sulfate kinase	identified by match to protein family HMM PF01583%3B match to protein family HMM TIGR00455	gene	gene1485	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1512
BAA_1513	BAA_1513		BAA_1513	1365564	1367186	+	putative sulfite reductase	identified by match to protein family HMM PF01077%3B match to protein family HMM PF03460	gene	gene1486	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1513
BAA_1514	BAA_1514		BAA_1514	1367197	1367400	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1487	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1514
BAA_1515	BAA_1515	cysG	cysG	1367487	1368263	+	uroporphyrinogen-III C-methyltransferase	identified by match to protein family HMM PF00590%3B match to protein family HMM TIGR01469	gene	gene1488	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1515
BAA_1516	BAA_1516		BAA_1516	1368265	1369020	+	cbiX domain protein	identified by match to protein family HMM PF01903	gene	gene1489	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1516
BAA_1517	BAA_1517		BAA_1517	1368995	1369612	+	siroheme synthase%2C precorrin 2 oxidase and ferrochelatase domains	identified by match to protein family HMM TIGR01470	gene	gene1490	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1517
BAA_1518	BAA_1518		BAA_1518	1370031	1371389	+	putative sodium-dependent transporter	identified by match to protein family HMM PF00209	gene	gene1491	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1518
BAA_1519	BAA_1519		BAA_1519	1371650	1372903	-	peptidase%2C M23/M37 family	identified by match to protein family HMM PF01551	gene	gene1492	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1519
BAA_1520	BAA_1520		BAA_1520	1373396	1374667	+	proton/glutamate symporter family protein	identified by match to protein family HMM PF00375	gene	gene1493	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1520
BAA_1521	BAA_1521		BAA_1521	1374735	1375253	+	conserved hypothetical protein	identified by match to protein family HMM PF04167	gene	gene1494	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1521
BAA_1523	BAA_1523		BAA_1523	1375575	1376891	+	Na+/H+ antiporter family protein	identified by match to protein family HMM PF03553%3B match to protein family HMM PF03600	gene	gene1495	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1523
BAA_1524	BAA_1524		BAA_1524	1377120	1377476	+	conserved hypothetical protein		gene	gene1496	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1524
BAA_1525	BAA_1525		BAA_1525	1377527	1378189	+	PspA/IM30 family protein	identified by match to protein family HMM PF04012	gene	gene1497	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1525
BAA_1526	BAA_1526		BAA_1526	1378296	1379036	+	conserved hypothetical protein		gene	gene1498	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1526
BAA_1527	BAA_1527		BAA_1527	1379036	1380091	+	sensor histidine kinase	identified by match to protein family HMM PF02518%3B match to protein family HMM PF07730	gene	gene1499	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1527
BAA_1528	BAA_1528		BAA_1528	1380088	1380720	+	DNA-binding response regulator	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00196%3B match to protein family HMM PF08281	gene	gene1500	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1528
BAA_1529	BAA_1529		BAA_1529	1380853	1381116	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1501	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1529
BAA_1530	BAA_1530	brnQ3	brnQ3	1381140	1382495	-	branched-chain amino acid transport system II carrier protein	identified by match to protein family HMM PF05525%3B match to protein family HMM TIGR00796	gene	gene1502	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1530
BAA_1531	BAA_1531		BAA_1531	1383332	1384108	-	methyltransferase%2C UbiE/COQ5 family	identified by match to protein family HMM PF01209%3B match to protein family HMM PF08241%3B match to protein family HMM PF08242	gene	gene1503	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1531
BAA_1532	BAA_1532		BAA_1532	1384300	1385067	+		ribosomal protein L5 domain protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1504	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1532
BAA_1533	BAA_1533		BAA_1533	1385162	1385359	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1505	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1533
BAA_1534	BAA_1534		BAA_1534	1385510	1386607	+	putative membrane protein	identified by match to protein family HMM PF02163	gene	gene1506	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1534
BAA_1535	BAA_1535		BAA_1535	1386722	1387240	+	conserved domain protein		gene	gene1507	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1535
BAA_1536	BAA_1536	hmp	hmp	1387400	1388608	+	nitric oxide dioxygenase	identified by match to protein family HMM PF00042%3B match to protein family HMM PF00175%3B match to protein family HMM PF00970	gene	gene1508	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1536
BAA_1537	BAA_1537		BAA_1537	1388642	1389154	-	putative transcriptional regulator	identified by match to protein family HMM PF00027	gene	gene1509	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1537
BAA_1538	BAA_1538		BAA_1538	1389325	1389552	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1510	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1538
BAA_1539	BAA_1539		BAA_1539	1389846	1390646	-	putative membrane protein	identified by match to protein family HMM PF01925	gene	gene1511	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1539
BAA_1540	BAA_1540		BAA_1540	1390764	1391762	-	phosphate transporter family protein	identified by match to protein family HMM PF01384	gene	gene1512	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1540
BAA_1541	BAA_1541		BAA_1541	1391774	1392394	-	conserved hypothetical protein	identified by match to protein family HMM PF01865	gene	gene1513	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1541
BAA_1542	BAA_1542		BAA_1542	1392707	1394728	+	penicillin-binding protein	identified by match to protein family HMM PF00905%3B match to protein family HMM PF00912%3B match to protein family HMM TIGR02074	gene	gene1514	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1542
BAA_1543	BAA_1543		BAA_1543	1394847	1395074	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1515	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1543
BAA_1544	BAA_1544		BAA_1544	1395470	1396411	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1516	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1544
BAA_1545	BAA_1545		BAA_1545	1396601	1396729	-		sensor histidine kinase%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1517	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1545
BAA_1546	BAA_1546		BAA_1546	1396720	1397862	-		histidine kinase A%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00512%3B match to protein family HMM TIGR00229	pseudogene	gene1518	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1546
BAA_1547	BAA_1547		BAA_1547	1398023	1398868	+	conserved hypothetical protein	identified by match to protein family HMM PF01904	gene	gene1519	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1547
BAA_1548	BAA_1548		BAA_1548	1399162	1399356	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1520	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1548
BAA_1549	BAA_1549		BAA_1549	1399476	1400006	-	site-specific recombinase%2C phage integrase family	identified by match to protein family HMM PF00589	gene	gene1521	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1549
BAA_1550	BAA_1550		BAA_1550	1400114	1401925	-	sensor histidine kinase	identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518	gene	gene1522	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1550
BAA_1551	BAA_1551	deoD	deoD	1402082	1402789	-	purine nucleoside phosphorylase	identified by match to protein family HMM PF01048%3B match to protein family HMM TIGR00107	gene	gene1523	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1551
BAA_1552	BAA_1552		BAA_1552	1403150	1404505	+	transposase%2C IS605 family	identified by match to protein family HMM PF07282%3B match to protein family HMM TIGR01766	gene	gene1524	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1552
BAA_1553	BAA_1553		BAA_1553	1404898	1405671	+	conserved domain protein		gene	gene1525	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1553
BAA_1554	BAA_1554		BAA_1554	1405676	1408261	-	putative lysylphosphatidylglycerol synthetase MprF	identified by match to protein family HMM PF03706%3B match to protein family HMM PF04329%3B match to protein family HMM PF04330%3B match to protein family HMM PF04331	gene	gene1526	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1554
BAA_1555	BAA_1555		BAA_1555	1408448	1408837	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1527	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1555
BAA_1556	BAA_1556		BAA_1556	1408859	1409350	+	conserved hypothetical protein		gene	gene1528	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1556
BAA_1557	BAA_1557		BAA_1557	1409456	1410370	+	superoxide dismutase	identified by match to protein family HMM PF00081%3B match to protein family HMM PF02777	gene	gene1529	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1557
BAA_1558	BAA_1558		BAA_1558	1410483	1411607	+	D-alanyl-D-alanine carboxypeptidase family protein	identified by match to protein family HMM PF00768%3B match to protein family HMM PF07943	gene	gene1530	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1558
BAA_1559	BAA_1559	spmA	spmA	1411600	1412196	+	spore maturation protein A	identified by match to protein family HMM PF07670	gene	gene1531	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1559
BAA_1560	BAA_1560		BAA_1560	1412193	1412723	+	spore maturation protein	identified by match to protein family HMM PF07670	gene	gene1532	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1560
BAA_1561	BAA_1561	rluB	rluB	1413013	1413741	+	ribosomal large subunit pseudouridine synthase B	identified by match to protein family HMM PF00849%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00093	gene	gene1533	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1561
BAA_1562	BAA_1562	resA	resA	1413836	1414357	+	resA protein	identified by match to protein family HMM PF00085%3B match to protein family HMM PF00578%3B match to protein family HMM PF02630%3B match to protein family HMM PF08534	gene	gene1534	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1562
BAA_1563	BAA_1563	resB	resB	1414479	1416104	+	resB protein	identified by match to protein family HMM PF05140	gene	gene1535	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1563
BAA_1564	BAA_1564	resC	resC	1416119	1417276	+	resC protein	identified by match to protein family HMM PF01578%3B match to protein family HMM TIGR03144	gene	gene1536	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1564
BAA_1565	BAA_1565	resD	resD	1417543	1418295	+	DNA-binding response regulator ResD	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486	gene	gene1537	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1565
BAA_1566	BAA_1566	resE	resE	1418295	1420070	+	sensor histidine kinase ResE	identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518	gene	gene1538	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1566
BAA_1567	BAA_1567		BAA_1567	1420208	1420789	+	putative ATP:cob(I)alamin adenosyltransferase	identified by match to protein family HMM PF01923%3B match to protein family HMM TIGR00636	gene	gene1539	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1567
BAA_1568	BAA_1568		BAA_1568	1420874	1421488	+	peptidase%2C M23/M37 family	identified by match to protein family HMM PF01476%3B match to protein family HMM PF01551	gene	gene1540	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1568
BAA_1569	BAA_1569		BAA_1569	1421653	1422339	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1541	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1569
BAA_1571	BAA_1571		BAA_1571	1422889	1423467	+	conserved hypothetical protein		gene	gene1542	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1571
BAA_1572	BAA_1572	fer	fer	1423589	1423837	-	ferredoxin		gene	gene1543	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1572
BAA_1573	BAA_1573		BAA_1573	1424136	1425197	+	conserved hypothetical protein		gene	gene1544	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1573
BAA_1574	BAA_1574	recQ1	recQ1	1425187	1426716	+	ATP-dependent DNA helicase RecQ	identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM TIGR00614	gene	gene1545	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1574
BAA_1575	BAA_1575		BAA_1575	1426716	1427279	+	CAAX amino terminal protease family protein	identified by match to protein family HMM PF02517	gene	gene1546	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1575
BAA_1576	BAA_1576		BAA_1576	1427302	1427781	+	lysM domain protein	identified by match to protein family HMM PF01476	gene	gene1547	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1576
BAA_1577	BAA_1577		BAA_1577	1427848	1428441	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00149	pseudogene	gene1548	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1577
BAA_1578	BAA_1578		BAA_1578	1428408	1428623	+		conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1549	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1578
BAA_1579	BAA_1579		BAA_1579	1428623	1429498	+	transcriptional regulator%2C MerR family	identified by match to protein family HMM PF00376	gene	gene1550	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1579
BAA_1580	BAA_1580		BAA_1580	1429576	1430184	+	putative negative regulator of competence MecA	identified by match to protein family HMM PF05389	gene	gene1551	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1580
BAA_1581	BAA_1581	gudB	gudB	1430453	1431739	+	glutamate dehydrogenase%2C NAD-specific	identified by match to protein family HMM PF00208%3B match to protein family HMM PF02812	gene	gene1552	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1581
BAA_1582	BAA_1582		BAA_1582	1431818	1432027	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1553	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1582
BAA_1583	BAA_1583		BAA_1583	1432120	1432356	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1554	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1583
BAA_1584	BAA_1584		BAA_1584	1432436	1432906	+		N-acetylmuramoyl-L-alanine amidase%2C family 2%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF01510	pseudogene	gene1555	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1584
BAA_1585	BAA_1585		BAA_1585	1433076	1434056	+	pyridine nucleotide-disulfide oxidoreductase family protein	identified by match to protein family HMM PF00070%3B match to protein family HMM PF07992	gene	gene1556	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1585
BAA_1586	BAA_1586	ansA1	ansA1	1434094	1435068	-	L-asparaginase	identified by match to protein family HMM PF00710	gene	gene1557	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1586
BAA_1587	BAA_1587	cmk	cmk	1435550	1436227	+	cytidylate kinase	identified by match to protein family HMM PF02224%3B match to protein family HMM TIGR00017	gene	gene1558	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1587
BAA_1588	BAA_1588	rpsA	rpsA	1436561	1437709	+	ribosomal protein S1	identified by match to protein family HMM PF00575	gene	gene1559	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1588
BAA_1589	BAA_1589		BAA_1589	1437722	1438771	+	isopentenyl-diphosphate delta-isomerase	identified by match to protein family HMM PF01180%3B match to protein family HMM TIGR02151	gene	gene1560	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1589
BAA_1590	BAA_1590		BAA_1590	1439088	1439222	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1561	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1590
BAA_1591	BAA_1591		BAA_1591	1439336	1439950	+	putative membrane protein		gene	gene1562	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1591
BAA_1592	BAA_1592		BAA_1592	1439943	1440836	+	conserved hypothetical protein		gene	gene1563	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1592
BAA_1593	BAA_1593		BAA_1593	1440833	1441018	+	conserved hypothetical protein		gene	gene1564	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1593
BAA_1594	BAA_1594	engA	engA	1441143	1442453	+	ribosome-associated GTPase EngA	identified by match to protein family HMM PF01926%3B match to protein family HMM PF08477%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR03594	gene	gene1565	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1594
BAA_1595	BAA_1595	gpsA	gpsA	1442472	1443494	+	glycerol-3-phosphate dehydrogenase (NAD(P)+)	identified by match to protein family HMM PF01210%3B match to protein family HMM PF03446%3B match to protein family HMM PF03807%3B match to protein family HMM PF07479	gene	gene1566	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1595
BAA_1596	BAA_1596		BAA_1596	1443611	1443862	+	conserved hypothetical protein		gene	gene1567	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1596
BAA_1597	BAA_1597		BAA_1597	1444129	1444332	+	conserved hypothetical protein		gene	gene1568	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1597
BAA_1598	BAA_1598		BAA_1598	1444397	1445110	+	conserved hypothetical protein		gene	gene1569	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1598
BAA_1599	BAA_1599	spoIVA	spoIVA	1445353	1446831	+	stage IV sporulation protein A	identified by match to protein family HMM PF09547%3B match to protein family HMM TIGR02836	gene	gene1570	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1599
BAA_1600	BAA_1600	hup1	hup1	1447130	1447402	+	DNA-binding protein HU	identified by match to protein family HMM PF00216	gene	gene1571	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1600
BAA_1601	BAA_1601	folE	folE	1447523	1448092	+	GTP cyclohydrolase I	identified by match to protein family HMM PF01227%3B match to protein family HMM TIGR00063	gene	gene1572	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1601
BAA_1602	BAA_1602		BAA_1602	1448353	1449057	+	putative heptaprenyl diphosphate synthase component I	identified by match to protein family HMM PF07307	gene	gene1573	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1602
BAA_1603	BAA_1603	menG	menG	1449087	1449800	+	2-heptaprenyl-1%2C4-naphthoquinone methyltransferase	identified by match to protein family HMM PF01209%3B match to protein family HMM PF02353%3B match to protein family HMM PF08241%3B match to protein family HMM PF08242%3B match to protein family HMM TIGR01934%3B match to protein family HMM TIGR02752	gene	gene1574	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1603
BAA_1604	BAA_1604	hepT	hepT	1449832	1450794	+	heptaprenyl diphosphate synthase component II	identified by match to protein family HMM PF00348%3B match to protein family HMM TIGR02748	gene	gene1575	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1604
BAA_1605	BAA_1605		BAA_1605	1450919	1451365	+	putative nucleoside diphosphate kinase	identified by match to protein family HMM PF00334	gene	gene1576	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1605
BAA_1606	BAA_1606	aroC1	aroC1	1451636	1452808	+	chorismate synthase	identified by match to protein family HMM PF01264%3B match to protein family HMM TIGR00033	gene	gene1577	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1606
BAA_1607	BAA_1607	aroB	aroB	1452808	1453899	+	3-dehydroquinate synthase	identified by match to protein family HMM PF01761%3B match to protein family HMM TIGR01357	gene	gene1578	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1607
BAA_1608	BAA_1608	hisC1	hisC1	1454031	1455143	+	histidinol-phosphate transaminase	identified by match to protein family HMM PF00155%3B match to protein family HMM TIGR01141	gene	gene1579	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1608
BAA_1609	BAA_1609		BAA_1609	1455456	1456718	+	TPR domain protein	identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719%3B match to protein family HMM PF07720	gene	gene1580	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1609
BAA_1610	BAA_1610		BAA_1610	1456792	1457328	+	conserved hypothetical protein	identified by match to protein family HMM PF08858%3B match to protein family HMM PF08864	gene	gene1581	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1610
BAA_1611	BAA_1611		BAA_1611	1457482	1457937	+	conserved hypothetical protein		gene	gene1582	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1611
BAA_1612	BAA_1612	qcrA	qcrA	1458081	1458593	+	menaquinol-cytochrome c reductase%2C iron-sulfur subunit	identified by match to protein family HMM PF00355	gene	gene1583	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1612
BAA_1613	BAA_1613	qcrB	qcrB	1458594	1459268	+	menaquinol-cytochrome c reductase%2C cytochrome b subunit	identified by match to protein family HMM PF00033	gene	gene1584	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1613
BAA_1614	BAA_1614	qcrC	qcrC	1459312	1460079	+	menaquinol-cytochrome c reductase%2C cytochrome b/c subunit		gene	gene1585	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1614
BAA_1615	BAA_1615		BAA_1615	1460190	1460792	+	putative membrane protein	identified by match to protein family HMM PF07187	gene	gene1586	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1615
BAA_1616	BAA_1616		BAA_1616	1460818	1461504	+	conserved hypothetical protein	identified by match to protein family HMM PF07314%3B match to protein family HMM TIGR01906	gene	gene1587	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1616
BAA_1617	BAA_1617		BAA_1617	1461612	1462400	+	conserved hypothetical protein	identified by match to protein family HMM PF09577%3B match to protein family HMM TIGR02878	gene	gene1588	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1617
BAA_1618	BAA_1618		BAA_1618	1462378	1463193	+	putative neutral zinc metallopeptidase	identified by match to protein family HMM PF04298	gene	gene1589	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1618
BAA_1619	BAA_1619		BAA_1619	1463295	1463936	+	uracil-DNA glycosylase family protein	identified by match to protein family HMM PF03167	gene	gene1590	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1619
BAA_1620	BAA_1620		BAA_1620	1463965	1464846	-	putative membrane protein	identified by match to protein family HMM PF02588	gene	gene1591	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1620
BAA_1621	BAA_1621		BAA_1621	1465172	1465570	+	conserved hypothetical protein	identified by match to protein family HMM PF03819	gene	gene1592	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1621
BAA_1622	BAA_1622	dapB	dapB	1465570	1466370	+	dihydrodipicolinate reductase	identified by match to protein family HMM PF01113%3B match to protein family HMM PF05173%3B match to protein family HMM TIGR00036	gene	gene1593	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1622
BAA_1623	BAA_1623	mgsA	mgsA	1466385	1466780	+	methylglyoxal synthase	identified by match to protein family HMM PF02142%3B match to protein family HMM TIGR00160	gene	gene1594	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1623
BAA_1624	BAA_1624		BAA_1624	1466792	1467496	+	conserved hypothetical protein	identified by match to protein family HMM PF02585	gene	gene1595	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1624
BAA_1625	BAA_1625		BAA_1625	1467493	1468638	+	glycosyl transferase%2C group 1 family	identified by match to protein family HMM PF00534	gene	gene1596	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1625
BAA_1626	BAA_1626		BAA_1626	1468625	1469818	+	tRNA nucleotidyltransferase/poly(A) polymerase family protein	identified by match to protein family HMM PF01743	gene	gene1597	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1626
BAA_1627	BAA_1627	birA	birA	1469803	1470783	+	biotin operon repressor/biotin-[acetyl-CoA-carboxylase] ligase	identified by match to protein family HMM PF02237%3B match to protein family HMM PF03099%3B match to protein family HMM PF08279%3B match to protein family HMM TIGR00121%3B match to protein family HMM TIGR00122	gene	gene1598	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1627
BAA_1628	BAA_1628		BAA_1628	1470884	1471273	-	conserved hypothetical protein		gene	gene1599	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1628
BAA_1629	BAA_1629	panB	panB	1471680	1472519	+	3-methyl-2-oxobutanoate hydroxymethyltransferase	identified by match to protein family HMM PF02548%3B match to protein family HMM TIGR00222	gene	gene1600	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1629
BAA_1630	BAA_1630	panC	panC	1472516	1473364	+	pantoate--beta-alanine ligase	identified by match to protein family HMM PF02569%3B match to protein family HMM TIGR00018%3B match to protein family HMM TIGR00125	gene	gene1601	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1630
BAA_1631	BAA_1631	panD	panD	1473377	1473760	+	aspartate 1-decarboxylase	identified by match to protein family HMM PF02261%3B match to protein family HMM TIGR00223	gene	gene1602	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1631
BAA_1632	BAA_1632		BAA_1632	1473889	1476693	+	putative DnaQ family exonuclease/DinG family helicase	identified by match to protein family HMM PF00929%3B match to protein family HMM TIGR00573%3B match to protein family HMM TIGR01407	gene	gene1603	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1632
BAA_1633	BAA_1633		BAA_1633	1476944	1477114	+	conserved hypothetical protein		gene	gene1604	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1633
BAA_1634	BAA_1634		BAA_1634	1477122	1477625	+	conserved hypothetical protein	identified by match to protein family HMM PF03413	gene	gene1605	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1634
BAA_1635	BAA_1635	aspB	aspB	1477644	1478831	+	aspartate aminotransferase	identified by match to protein family HMM PF00155	gene	gene1606	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1635
BAA_1636	BAA_1636	dnaD	dnaD	1478953	1479660	+	DNA replication protein DnaD	identified by match to protein family HMM PF04271%3B match to protein family HMM TIGR01446	gene	gene1607	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1636
BAA_1637	BAA_1637	nth	nth	1479676	1480323	+	endonuclease III	identified by match to protein family HMM PF00633%3B match to protein family HMM PF00730%3B match to protein family HMM TIGR01083	gene	gene1608	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1637
BAA_1638	BAA_1638		BAA_1638	1480327	1480845	+	conserved hypothetical protein		gene	gene1609	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1638
BAA_1639	BAA_1639		BAA_1639	1480869	1483562	-	penicillin-binding protein	identified by match to protein family HMM PF00041%3B match to protein family HMM PF00905%3B match to protein family HMM PF00912%3B match to protein family HMM TIGR02074	gene	gene1610	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1639
BAA_1640	BAA_1640	recU	recU	1483628	1484230	-	recombination protein U	identified by match to protein family HMM PF03838%3B match to protein family HMM TIGR00648	gene	gene1611	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1640
BAA_1641	BAA_1641		BAA_1641	1484334	1485359	+	conserved hypothetical protein		gene	gene1612	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1641
BAA_1642	BAA_1642		BAA_1642	1485626	1485802	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1613	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1642
BAA_1643	BAA_1643		BAA_1643	1485888	1486130	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1614	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1643
BAA_1644	BAA_1644		BAA_1644	1486146	1486490	+	conserved hypothetical protein	identified by match to protein family HMM PF08807	gene	gene1615	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1644
BAA_1645	BAA_1645		BAA_1645	1486516	1486707	-	conserved hypothetical protein		gene	gene1616	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1645
BAA_1646	BAA_1646		BAA_1646	1486885	1487364	+	conserved hypothetical protein		gene	gene1617	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1646
BAA_1647	BAA_1647		BAA_1647	1487519	1487941	+	putative spore coat protein D		gene	gene1618	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1647
BAA_1648	BAA_1648		BAA_1648	1487997	1488551	+	conserved hypothetical protein	identified by match to protein family HMM PF06908	gene	gene1619	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1648
BAA_1649	BAA_1649		BAA_1649	1488649	1488987	+	conserved hypothetical protein	identified by match to protein family HMM PF05103%3B match to protein family HMM TIGR03544	gene	gene1620	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1649
BAA_1650	BAA_1650		BAA_1650	1489073	1489468	+	Bacterial RNase P class B		gene	gene1621	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1650
BAA_1651	BAA_1651		BAA_1651	1489646	1490785	+	conserved hypothetical protein	identified by match to protein family HMM PF01170%3B match to protein family HMM PF02926	gene	gene1622	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1651
BAA_1652	BAA_1652		BAA_1652	1490847	1491029	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1623	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1652
BAA_1653	BAA_1653		BAA_1653	1491167	1493104	+	conserved hypothetical protein		gene	gene1624	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1653
BAA_1654	BAA_1654		BAA_1654	1493210	1494727	+	thermostable carboxypeptidase 1	identified by match to protein family HMM PF02074	gene	gene1625	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1654
BAA_1655	BAA_1655		BAA_1655	1494773	1495246	+	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene1626	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1655
BAA_1656	BAA_1656		BAA_1656	1495301	1496197	-	putative macrolide 2-phosphotransferase	identified by match to protein family HMM PF01636	gene	gene1627	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1656
BAA_1657	BAA_1657	maP2	maP2	1496731	1497477	+	methionine aminopeptidase%2C type I	identified by match to protein family HMM PF00557%3B match to protein family HMM TIGR00500	gene	gene1628	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1657
BAA_1659	BAA_1659		BAA_1659	1497675	1497788	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1629	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1659
BAA_1660	BAA_1660	xpt	xpt	1497803	1498396	+	xanthine phosphoribosyltransferase	identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01744	gene	gene1630	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1660
BAA_1661	BAA_1661	pbuX	pbuX	1498400	1499722	+	xanthine permease	identified by match to protein family HMM PF00860%3B match to protein family HMM PF00916%3B match to protein family HMM TIGR00801%3B match to protein family HMM TIGR03173	gene	gene1631	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1661
BAA_1662	BAA_1662		BAA_1662	1499795	1500958	-	putative membrane protein	identified by match to protein family HMM PF04171%3B match to protein family HMM PF04235	gene	gene1632	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1662
BAA_1663	BAA_1663		BAA_1663	1501156	1501311	+		conserved hypothetical protein%3B this region contains one or more premature stops and/or frameshifts	pseudogene	gene1633	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1663
BAA_1664	BAA_1664		BAA_1664	1501506	1505165	+	conserved hypothetical protein	identified by match to protein family HMM PF00350%3B match to protein family HMM PF01926	gene	gene1634	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1664
BAA_1665	BAA_1665		BAA_1665	1505169	1505423	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1635	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1665
BAA_1666	BAA_1666		BAA_1666	1505496	1505963	+	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene1636	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1666
BAA_1667	BAA_1667		BAA_1667	1505985	1506257	+	conserved hypothetical protein		gene	gene1637	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1667
BAA_1668	BAA_1668		BAA_1668	1506260	1507093	+	rhodanese-like domain protein	identified by match to protein family HMM PF00581	gene	gene1638	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1668
BAA_1669	BAA_1669		BAA_1669	1507210	1507392	+	6S / SsrS RNA		ncRNA	gene1639	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1669
BAA_1670	BAA_1670		BAA_1670	1507414	1507597	+	6S / SsrS RNA		ncRNA	gene1640	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1670
BAA_1671	BAA_1671		BAA_1671	1507773	1508222	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1641	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1671
BAA_1672	BAA_1672		BAA_1672	1508306	1508617	+	putative lipoprotein		gene	gene1642	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1672
BAA_1673	BAA_1673		BAA_1673	1508705	1509856	+		conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF03738	pseudogene	gene1643	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1673
BAA_1674	BAA_1674		BAA_1674	1509853	1510239	+	conserved hypothetical protein	identified by match to protein family HMM PF03994	gene	gene1644	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1674
BAA_1676	BAA_1676		BAA_1676	1510932	1511657	+	putative cation transporter		gene	gene1645	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1676
BAA_1677	BAA_1677		BAA_1677	1511788	1512654	+	5'-3' exonuclease family protein	identified by match to protein family HMM PF01367%3B match to protein family HMM PF02739	gene	gene1646	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1677
BAA_1678	BAA_1678		BAA_1678	1513011	1513151	+	conserved hypothetical protein		gene	gene1647	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1678
BAA_1679	BAA_1679		BAA_1679	1513488	1514681	+	acyltransferase family protein	identified by match to protein family HMM PF01757	gene	gene1648	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1679
BAA_1680	BAA_1680		BAA_1680	1514682	1515425	+	chain length determinant protein	identified by match to protein family HMM PF02706	gene	gene1649	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1680
BAA_1681	BAA_1681		BAA_1681	1515418	1515627	+		putative capsular polysaccharide biosynthesis protein tyrosine kinase%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1650	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1681
BAA_1682	BAA_1682		BAA_1682	1515801	1516031	+		tyrosine-protein kinase%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1651	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1682
BAA_1683	BAA_1683		BAA_1683	1516050	1516688	+	putative capsular polysaccharide biosynthesis glycosyltransferase	identified by match to protein family HMM PF02397	gene	gene1652	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1683
BAA_1684	BAA_1684		BAA_1684	1516731	1518167	+	polysaccharide synthase family protein	identified by match to protein family HMM PF01943	gene	gene1653	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1684
BAA_1685	BAA_1685		BAA_1685	1518171	1519385	+	putative membrane protein	identified by match to protein family HMM PF04932	gene	gene1654	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1685
BAA_1686	BAA_1686		BAA_1686	1519360	1520160	+	glycosyl transferase%2C group 2 family	identified by match to protein family HMM PF00535	gene	gene1655	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1686
BAA_1687	BAA_1687		BAA_1687	1520157	1520459	+		glycosyltransferase%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1656	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1687
BAA_1688	BAA_1688		BAA_1688	1520456	1521208	+		glycosyl transferase group 1%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00534	pseudogene	gene1657	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1688
BAA_1689	BAA_1689		BAA_1689	1521301	1522848	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1658	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1689
BAA_1690	BAA_1690		BAA_1690	1522960	1538013	-	conserved repeat domain protein	identified by match to protein family HMM PF01345%3B match to protein family HMM TIGR01451	gene	gene1659	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1690
BAA_1691	BAA_1691		BAA_1691	1538145	1538996	+	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene1660	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1691
BAA_1692	BAA_1692		BAA_1692	1539037	1539597	-	isochorismatase family protein	identified by match to protein family HMM PF00857	gene	gene1661	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1692
BAA_1693	BAA_1693		BAA_1693	1539779	1540039	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1662	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1693
BAA_1694	BAA_1694		BAA_1694	1540042	1540953	-	transporter%2C EamA family	identified by match to protein family HMM PF00892	gene	gene1663	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1694
BAA_1695	BAA_1695	rnhA	rnhA	1540961	1541347	-	ribonuclease H	identified by match to protein family HMM PF00075	gene	gene1664	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1695
BAA_1696	BAA_1696		BAA_1696	1541417	1542289	-	putative lacX protein	identified by match to protein family HMM PF01263	gene	gene1665	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1696
BAA_1698	BAA_1698		BAA_1698	1542473	1542958	+	conserved hypothetical protein	identified by match to protein family HMM PF06177	gene	gene1666	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1698
BAA_1699	BAA_1699		BAA_1699	1543102	1543761	+	conserved domain protein		gene	gene1667	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1699
BAA_1700	BAA_1700		BAA_1700	1543774	1543950	+	conserved hypothetical protein		gene	gene1668	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1700
BAA_1701	BAA_1701		BAA_1701	1543984	1544232	-	conserved hypothetical protein		gene	gene1669	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1701
BAA_1702	BAA_1702	cspB1	cspB1	1544352	1544549	-	cold shock protein CspB	identified by match to protein family HMM PF00313	gene	gene1670	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1702
BAA_1703	BAA_1703		BAA_1703	1544812	1545540	+	conserved hypothetical protein	identified by match to protein family HMM PF08892	gene	gene1671	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1703
BAA_1704	BAA_1704		BAA_1704	1545611	1546312	+	putative membrane protein	identified by match to protein family HMM PF01810	gene	gene1672	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1704
BAA_1705	BAA_1705		BAA_1705	1546332	1546625	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1673	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1705
BAA_1706	BAA_1706		BAA_1706	1546705	1547334	+	fatty acid hydroxylase-like protein	identified by match to protein family HMM PF04116	gene	gene1674	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1706
BAA_1707	BAA_1707		BAA_1707	1547558	1547899	+	conserved hypothetical protein	identified by match to protein family HMM PF04341	gene	gene1675	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1707
BAA_1708	BAA_1708		BAA_1708	1547902	1549452	+	sodium/solute symporter family protein	identified by match to protein family HMM PF00474%3B match to protein family HMM TIGR00813	gene	gene1676	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1708
BAA_1709	BAA_1709		BAA_1709	1549639	1550991	+	putative adenosylmethionine--8-amino-7-oxononanoate aminotransferase	identified by match to protein family HMM PF00202	gene	gene1677	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1709
BAA_1710	BAA_1710		BAA_1710	1551076	1551354	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1678	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1710
BAA_1711	BAA_1711		BAA_1711	1551413	1552576	-	germination protein gerN	identified by match to protein family HMM PF00999%3B match to protein family HMM TIGR00932	gene	gene1679	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1711
BAA_1712	BAA_1712		BAA_1712	1552908	1554557	+		RNA-metabolising metallo-beta-lactamase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00753%3B match to protein family HMM PF07521%3B match to protein family HMM TIGR00649	pseudogene	gene1680	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1712
BAA_1713	BAA_1713		BAA_1713	1554681	1555511	+	transcriptional regulator%2C MerR family	identified by match to protein family HMM PF00376	gene	gene1681	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1713
BAA_1714	BAA_1714		BAA_1714	1555650	1557005	+	MATE efflux family protein	identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797	gene	gene1682	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1714
BAA_1715	BAA_1715		BAA_1715	1557041	1557706	-	conserved hypothetical protein	identified by match to protein family HMM PF04239	gene	gene1683	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1715
BAA_1716	BAA_1716		BAA_1716	1557821	1557946	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1684	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1716
BAA_1717	BAA_1717		BAA_1717	1557909	1558445	+	conserved hypothetical protein	identified by match to protein family HMM PF02698	gene	gene1685	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1717
BAA_1718	BAA_1718		BAA_1718	1558591	1558908	+	conserved hypothetical protein		gene	gene1686	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1718
BAA_1719	BAA_1719		BAA_1719	1559181	1559915	+	nitroreductase family protein	identified by match to protein family HMM PF00881	gene	gene1687	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1719
BAA_1720	BAA_1720		BAA_1720	1559966	1560550	+	thiJ/pfpI family protein	identified by match to protein family HMM PF01965	gene	gene1688	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1720
BAA_1721	BAA_1721		BAA_1721	1560663	1561388	-	putative membrane protein	identified by match to protein family HMM PF01925	gene	gene1689	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1721
BAA_1722	BAA_1722		BAA_1722	1561513	1562733	-	putative membrane protein	identified by match to protein family HMM PF07690	gene	gene1690	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1722
BAA_1723	BAA_1723		BAA_1723	1562753	1563202	-	conserved domain protein	identified by match to protein family HMM PF01022	gene	gene1691	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1723
BAA_1724	BAA_1724		BAA_1724	1563331	1564545	-	putative permease	identified by match to protein family HMM PF07690	gene	gene1692	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1724
BAA_1725	BAA_1725		BAA_1725	1564553	1565020	-	glyoxalase family protein		gene	gene1693	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1725
BAA_1726	BAA_1726		BAA_1726	1565187	1565306	-	conserved hypothetical protein	identified by match to protein family HMM PF09680%3B match to protein family HMM TIGR01732	gene	gene1694	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1726
BAA_1727	BAA_1727		BAA_1727	1565573	1565764	+	stage 0 sporulation regulatory protein	identified by match to protein family HMM PF09388	gene	gene1695	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1727
BAA_1728	BAA_1728	hfq1	hfq1	1565818	1566006	+	host factor-I protein	identified by match to protein family HMM PF01423%3B match to protein family HMM TIGR02383	gene	gene1696	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1728
BAA_1729	BAA_1729		BAA_1729	1566034	1566636	-	conserved hypothetical protein	identified by match to protein family HMM PF01966	gene	gene1697	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1729
BAA_1730	BAA_1730		BAA_1730	1566877	1567641	+		putative chemotaxis protein MotA%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01618	pseudogene	gene1698	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1730
BAA_1731	BAA_1731		BAA_1731	1567664	1568341	+	putative chemotaxis protein MotB	identified by match to protein family HMM PF00691	gene	gene1699	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1731
BAA_1732	BAA_1732		BAA_1732	1568492	1568860	+	chemotaxis response regulator	identified by match to protein family HMM PF00072	gene	gene1700	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1732
BAA_1733	BAA_1733		BAA_1733	1568990	1569616	+		chemotaxis protein CheA%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01627	pseudogene	gene1701	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1733
BAA_1734	BAA_1734		BAA_1734	1569586	1570992	+		chemotaxis protein CheA%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01584%3B match to protein family HMM PF02518%3B match to protein family HMM PF02895	pseudogene	gene1702	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1734
BAA_1735	BAA_1735		BAA_1735	1571166	1572806	+	putative flagellar motor switch protein	identified by match to protein family HMM PF01052%3B match to protein family HMM PF04509	gene	gene1703	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1735
BAA_1736	BAA_1736		BAA_1736	1572836	1574188	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1704	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1736
BAA_1737	BAA_1737		BAA_1737	1574216	1574932	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1705	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1737
BAA_1738	BAA_1738	cheR	cheR	1574966	1575748	-	chemotaxis protein methyltransferase CheR	identified by match to protein family HMM PF01739%3B match to protein family HMM PF03705	gene	gene1706	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1738
BAA_1739	BAA_1739		BAA_1739	1575793	1576284	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1707	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1739
BAA_1740	BAA_1740		BAA_1740	1576428	1576892	+	conserved hypothetical protein		gene	gene1708	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1740
BAA_1741	BAA_1741		BAA_1741	1576909	1577361	+	conserved domain protein		gene	gene1709	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1741
BAA_1742	BAA_1742		BAA_1742	1577379	1578677	+	putative flagellar hook-associated protein	identified by match to protein family HMM PF06429%3B match to protein family HMM TIGR02492	gene	gene1710	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1742
BAA_1743	BAA_1743		BAA_1743	1578882	1579505	+		putative flagellar hook-associated protein FlgL%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1711	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1743
BAA_1744	BAA_1744		BAA_1744	1579465	1579746	+		flagellin%2C C-terminus%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1712	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1744
BAA_1745	BAA_1745		BAA_1745	1579766	1581118	+	putative flagellar hook-associated FliD	identified by match to protein family HMM PF02465%3B match to protein family HMM PF07195	gene	gene1713	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1745
BAA_1746	BAA_1746		BAA_1746	1581141	1581509	+	putative flagellar protein FliS		gene	gene1714	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1746
BAA_1747	BAA_1747		BAA_1747	1581499	1581771	+	conserved hypothetical protein		gene	gene1715	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1747
BAA_1748	BAA_1748	flgB	flgB	1582141	1582548	+	flagellar basal-body rod protein FlgB	identified by match to protein family HMM TIGR01396	gene	gene1716	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1748
BAA_1749	BAA_1749	flgC	flgC	1582569	1582982	+	flagellar basal-body rod protein FlgC	identified by match to protein family HMM PF06429%3B match to protein family HMM TIGR01395	gene	gene1717	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1749
BAA_1750	BAA_1750		BAA_1750	1582999	1583298	+	putative flagellar hook-basal body complex protein FliE		gene	gene1718	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1750
BAA_1751	BAA_1751		BAA_1751	1583321	1584703	+		putative flagellar M-ring protein FliF%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01514%3B match to protein family HMM PF08345	pseudogene	gene1719	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1751
BAA_1752	BAA_1752		BAA_1752	1584739	1584891	+		flagellar MS-ring protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1720	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1752
BAA_1753	BAA_1753	fliG	fliG	1584905	1585909	+	flagellar motor switch protein FliG	identified by match to protein family HMM PF01706%3B match to protein family HMM TIGR00207	gene	gene1721	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1753
BAA_1754	BAA_1754		BAA_1754	1585896	1586582	+	conserved hypothetical protein		gene	gene1722	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1754
BAA_1755	BAA_1755		BAA_1755	1586579	1587883	+	putative flagellum-specific ATP synthase	identified by match to protein family HMM PF00006%3B match to protein family HMM TIGR01026%3B match to protein family HMM TIGR03497	gene	gene1723	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1755
BAA_1756	BAA_1756		BAA_1756	1588000	1588134	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1724	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1756
BAA_1757	BAA_1757		BAA_1757	1588173	1588409	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1725	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1757
BAA_1758	BAA_1758		BAA_1758	1588420	1588623	+		conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1726	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1758
BAA_1759	BAA_1759		BAA_1759	1588674	1589534	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1727	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1759
BAA_1760	BAA_1760		BAA_1760	1589538	1590110	+	flagellar hook assembly protein family protein	identified by match to protein family HMM PF03963	gene	gene1728	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1760
BAA_1761	BAA_1761		BAA_1761	1590132	1591445	+	putative flagellar hook protein FlgE	identified by match to protein family HMM PF00460%3B match to protein family HMM PF06429%3B match to protein family HMM PF07559%3B match to protein family HMM TIGR03506	gene	gene1729	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1761
BAA_1762	BAA_1762		BAA_1762	1591495	1591833	+	conserved hypothetical protein		gene	gene1730	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1762
BAA_1763	BAA_1763		BAA_1763	1592141	1592311	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1731	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1763
BAA_1764	BAA_1764		BAA_1764	1592308	1592625	+		group-specific protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1732	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1764
BAA_1765	BAA_1765		BAA_1765	1592750	1593178	+		chemotaxis protein CheV%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01584	pseudogene	gene1733	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1765
BAA_1766	BAA_1766		BAA_1766	1593169	1593657	+		chemotaxis protein CheV%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00072	pseudogene	gene1734	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1766
BAA_1767	BAA_1767		BAA_1767	1594294	1595241	+	conserved hypothetical protein		gene	gene1735	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1767
BAA_1768	BAA_1768		BAA_1768	1596320	1596772	+		glycosyl transferase%2C group 2 family%3B this region contains one or more premature stops and/or frameshifts%3B identified by match to protein family HMM PF00535	pseudogene	gene1736	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1768
BAA_1769	BAA_1769		BAA_1769	1596757	1596873	+		hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by glimmer%3B putative	pseudogene	gene1737	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1769
BAA_1770	BAA_1770		BAA_1770	1596854	1596988	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1738	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1770
BAA_1771	BAA_1771		BAA_1771	1597186	1597446	+		hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by glimmer%3B putative	pseudogene	gene1739	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1771
BAA_1772	BAA_1772		BAA_1772	1597562	1597714	+		hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by glimmer%3B putative	pseudogene	gene1740	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1772
BAA_1773	BAA_1773		BAA_1773	1597947	1599650	+	TPR/glycosyl transferase domain protein	identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719	gene	gene1741	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1773
BAA_1774	BAA_1774		BAA_1774	1602126	1602803	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1742	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1774
BAA_1775	BAA_1775		BAA_1775	1603113	1603664	+		glycosyl transferase%2C group 2 family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00535	pseudogene	gene1743	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1775
BAA_1776	BAA_1776		BAA_1776	1603861	1605015	+		glycosyl transferase family 2%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1744	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1776
BAA_1777	BAA_1777		BAA_1777	1605116	1605304	+		conserved hypothetical protein%3B this region contains one or more premature stops and/or frameshifts	pseudogene	gene1745	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1777
BAA_1778	BAA_1778		BAA_1778	1605380	1605523	+		hypothetical protein%3B this region contains one or more premature stops and/or frameshifts%3Bidentified by glimmer%3B putative	pseudogene	gene1746	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1778
BAA_1779	BAA_1779		BAA_1779	1605834	1606058	+		transposase%3B this region contains one or more premature stops and/or frameshifts	pseudogene	gene1747	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1779
BAA_1780	BAA_1780		BAA_1780	1606894	1607757	-	flagellin	identified by match to protein family HMM PF00669%3B match to protein family HMM PF00700	gene	gene1748	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1780
BAA_1781	BAA_1781		BAA_1781	1608013	1608798	+	transglycosylase%2C SLT family	identified by match to protein family HMM PF01464	gene	gene1749	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1781
BAA_1782	BAA_1782		BAA_1782	1608898	1609083	+		conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1750	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1782
BAA_1783	BAA_1783		BAA_1783	1609098	1609700	+		putative flagellar motor switch protein FliM%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1751	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1783
BAA_1784	BAA_1784		BAA_1784	1609726	1610088	+		flagellar motor switch protein FliM%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01052	pseudogene	gene1752	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1784
BAA_1785	BAA_1785		BAA_1785	1610099	1610458	+	putative flagellar motor switch protein FliN	identified by match to protein family HMM PF01052%3B match to protein family HMM TIGR02480	gene	gene1753	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1785
BAA_1786	BAA_1786		BAA_1786	1610471	1610791	+	conserved hypothetical protein		gene	gene1754	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1786
BAA_1787	BAA_1787		BAA_1787	1610788	1611546	+	putative flagellar biosynthetic protein FliP	identified by match to protein family HMM PF00813	gene	gene1755	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1787
BAA_1788	BAA_1788		BAA_1788	1611580	1611855	+	putative flagellar biosynthetic protein FliQ	identified by match to protein family HMM PF01313	gene	gene1756	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1788
BAA_1789	BAA_1789	fliR	fliR	1611871	1612632	+	flagellar biosynthetic protein FliR	identified by match to protein family HMM PF01311	gene	gene1757	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1789
BAA_1790	BAA_1790		BAA_1790	1612643	1613689	+	putative flagellar biosynthetic protein FlhB	identified by match to protein family HMM PF01312	gene	gene1758	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1790
BAA_1791	BAA_1791	flhA	flhA	1613713	1615779	+	Flagellar biosynthesis protein FlhA	identified by match to protein family HMM PF00771	gene	gene1759	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1791
BAA_1792	BAA_1792		BAA_1792	1615794	1616249	+		putative flagellar biosynthetic protein FlhF%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene1760	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1792
BAA_1793	BAA_1793		BAA_1793	1616256	1617101	+		flagellar biosynthesis regulator FlhF%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF00448	pseudogene	gene1761	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1793
BAA_1794	BAA_1794		BAA_1794	1617144	1617917	+	putative flagellar basal-body rod protein	identified by match to protein family HMM PF00460%3B match to protein family HMM PF06429%3B match to protein family HMM TIGR03506	gene	gene1762	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1794
BAA_1795	BAA_1795		BAA_1795	1618035	1618745	+	alanyl-tRNA synthetase domain protein	identified by match to protein family HMM PF07973	gene	gene1763	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1795
BAA_1796	BAA_1796		BAA_1796	1618763	1619599	+	conserved hypothetical protein	identified by match to protein family HMM PF01978	gene	gene1764	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1796
BAA_1797	BAA_1797		BAA_1797	1619592	1620317	+	AzlC family protein	identified by match to protein family HMM PF03591	gene	gene1765	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1797
BAA_1798	BAA_1798		BAA_1798	1620308	1620619	+	conserved hypothetical protein	identified by match to protein family HMM PF05437	gene	gene1766	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1798
BAA_1799	BAA_1799		BAA_1799	1620682	1620852	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1767	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1799
BAA_1800	BAA_1800		BAA_1800	1620940	1621524	+	transcriptional regulator%2C TetR family	identified by match to protein family HMM PF00440	gene	gene1768	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1800
BAA_1801	BAA_1801		BAA_1801	1621517	1621915	+	conserved hypothetical protein		gene	gene1769	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1801
BAA_1802	BAA_1802		BAA_1802	1622302	1622907	-	conserved hypothetical protein	identified by match to protein family HMM PF01738	gene	gene1770	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1802
BAA_1803	BAA_1803		BAA_1803	1622910	1623245	-	conserved hypothetical protein	identified by match to protein family HMM PF03992	gene	gene1771	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1803
BAA_1804	BAA_1804		BAA_1804	1623434	1623613	-	small acid-soluble spore protein%2C H-type	identified by match to protein family HMM PF08141%3B match to protein family HMM TIGR02861	gene	gene1772	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1804
BAA_1805	BAA_1805		BAA_1805	1623680	1624891	-	DNA-binding protein	identified by match to protein family HMM PF01381	gene	gene1773	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1805
BAA_1806	BAA_1806		BAA_1806	1625011	1626279	+	putative permease	identified by match to protein family HMM PF07690	gene	gene1774	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1806
BAA_1807	BAA_1807		BAA_1807	1626385	1626912	+	putative lipoprotein		gene	gene1775	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1807
BAA_1808	BAA_1808		BAA_1808	1626953	1627846	-	transcriptional regulator%2C LysR family	identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466	gene	gene1776	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1808
BAA_1809	BAA_1809		BAA_1809	1628009	1628965	+		ABC transporter%2C ATP-binding protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00005	pseudogene	gene1777	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1809
BAA_1810	BAA_1810		BAA_1810	1628978	1630003	+	putative ABC transporter%2C substrate-binding protein	identified by match to protein family HMM PF01547	gene	gene1778	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1810
BAA_1811	BAA_1811		BAA_1811	1630016	1631686	+	putative ABC transporter%2C permease protein	identified by match to protein family HMM PF00528	gene	gene1779	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1811
BAA_1812	BAA_1812		BAA_1812	1631686	1632945	+	metallo-beta-lactamase family protein	identified by match to protein family HMM PF00753%3B match to protein family HMM PF07521	gene	gene1780	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1812
BAA_1813	BAA_1813		BAA_1813	1632966	1633799	+	conserved domain protein		gene	gene1781	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1813
BAA_1814	BAA_1814		BAA_1814	1633849	1634262	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1782	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1814
BAA_1815	BAA_1815		BAA_1815	1634494	1634655	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1783	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1815
BAA_1816	BAA_1816		BAA_1816	1634815	1635450	+	conserved domain protein	identified by match to protein family HMM PF00190	gene	gene1784	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1816
BAA_1817	BAA_1817		BAA_1817	1635552	1636643	+	conserved domain protein		gene	gene1785	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1817
BAA_1818	BAA_1818		BAA_1818	1636694	1637335	+	conserved hypothetical protein		gene	gene1786	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1818
BAA_1819	BAA_1819		BAA_1819	1637494	1638069	+	phosphoglycerate mutase family protein	identified by match to protein family HMM PF00300	gene	gene1787	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1819
BAA_1820	BAA_1820		BAA_1820	1638159	1638530	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1788	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1820
BAA_1821	BAA_1821		BAA_1821	1638549	1639409	-	hydrolase%2C alpha/beta fold family	identified by match to protein family HMM PF00561	gene	gene1789	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1821
BAA_1822	BAA_1822		BAA_1822	1639442	1639789	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1790	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1822
BAA_1823	BAA_1823		BAA_1823	1639773	1640057	-		putative transcriptional regulator%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1791	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1823
BAA_1824	BAA_1824		BAA_1824	1640023	1640181	-		putative transcriptional regulator%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1792	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1824
BAA_1825	BAA_1825		BAA_1825	1640339	1641133	+	group-specific protein		gene	gene1793	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1825
BAA_1826	BAA_1826	asnO2	asnO2	1641176	1642999	-	asparagine synthetase%2C glutamine-hydrolyzing	identified by match to protein family HMM PF00310%3B match to protein family HMM PF00733%3B match to protein family HMM TIGR01536	gene	gene1794	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1826
BAA_1827	BAA_1827		BAA_1827	1643264	1643830	+	RNA polymerase sigma-70 factor%2C ECF subfamily	identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937	gene	gene1795	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1827
BAA_1828	BAA_1828		BAA_1828	1643827	1644927	+	conserved domain protein		gene	gene1796	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1828
BAA_1829	BAA_1829		BAA_1829	1644967	1646040	-	BNR repeat domain protein		gene	gene1797	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1829
BAA_1830	BAA_1830		BAA_1830	1646231	1647130	+	cation efflux family protein	identified by match to protein family HMM PF01545%3B match to protein family HMM TIGR01297	gene	gene1798	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1830
BAA_1831	BAA_1831		BAA_1831	1647324	1647494	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1799	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1831
BAA_1832	BAA_1832		BAA_1832	1647551	1648222	-	transcriptional regulator%2C GntR family	identified by match to protein family HMM PF00392%3B match to protein family HMM PF07729	gene	gene1800	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1832
BAA_1833	BAA_1833		BAA_1833	1648239	1649207	-	transporter%2C EamA family	identified by match to protein family HMM PF00892	gene	gene1801	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1833
BAA_1834	BAA_1834		BAA_1834	1649390	1650577	-	putative cobalamin synthesis protein	identified by match to protein family HMM PF02492%3B match to protein family HMM PF07683	gene	gene1802	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1834
BAA_1835	BAA_1835		BAA_1835	1650765	1651742	+	putative membrane protein	identified by match to protein family HMM PF03773	gene	gene1803	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1835
BAA_1836	BAA_1836		BAA_1836	1651756	1652628	+	conserved hypothetical protein	identified by match to protein family HMM PF09323	gene	gene1804	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1836
BAA_1837	BAA_1837		BAA_1837	1652741	1653400	+	conserved domain protein		gene	gene1805	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1837
BAA_1838	BAA_1838		BAA_1838	1653494	1653631	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1806	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1838
BAA_1839	BAA_1839	nhaC2	nhaC2	1653733	1655136	+	Na+/H+ antiporter NhaC	identified by match to protein family HMM PF03553%3B match to protein family HMM PF03600%3B match to protein family HMM TIGR00931	gene	gene1807	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1839
BAA_1840	BAA_1840	fumC	fumC	1655392	1656780	+	fumarate hydratase%2C class II	identified by match to protein family HMM PF00206%3B match to protein family HMM TIGR00979	gene	gene1808	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1840
BAA_1841	BAA_1841		BAA_1841	1656868	1657290	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1809	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1841
BAA_1842	BAA_1842		BAA_1842	1657521	1657754	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1810	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1842
BAA_1843	BAA_1843		BAA_1843	1657979	1658743	+	conserved hypothetical protein		gene	gene1811	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1843
BAA_1844	BAA_1844		BAA_1844	1658842	1659558	+		Na+ driven multidrug antiporter%2C N-terminus%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01554	pseudogene	gene1812	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1844
BAA_1845	BAA_1845		BAA_1845	1659585	1660250	+		putative MATE efflux protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01554	pseudogene	gene1813	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1845
BAA_1846	BAA_1846		BAA_1846	1660307	1661005	-	conserved hypothetical protein	identified by match to protein family HMM PF03575	gene	gene1814	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1846
BAA_1847	BAA_1847		BAA_1847	1661441	1661797	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1815	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1847
BAA_1848	BAA_1848		BAA_1848	1661905	1662318	+	conserved hypothetical protein	identified by match to protein family HMM PF03965	gene	gene1816	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1848
BAA_1849	BAA_1849		BAA_1849	1662323	1663135	+	conserved domain protein	identified by match to protein family HMM PF01435%3B match to protein family HMM PF05569	gene	gene1817	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1849
BAA_1850	BAA_1850	ccdA1	ccdA1	1663189	1663902	+	cytochrome c-type biogenesis protein CcdA	identified by match to protein family HMM PF02683	gene	gene1818	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1850
BAA_1851	BAA_1851		BAA_1851	1663921	1664475	+	thioredoxin family protein	identified by match to protein family HMM PF00085%3B match to protein family HMM PF00578%3B match to protein family HMM PF08534	gene	gene1819	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1851
BAA_1852	BAA_1852		BAA_1852	1664493	1665173	+	prolipoprotein diacylglyceryl transferase family protein		gene	gene1820	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1852
BAA_1853	BAA_1853		BAA_1853	1665224	1665769	-	DNA-binding protein	identified by match to protein family HMM PF01381%3B match to protein family HMM PF07883	gene	gene1821	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1853
BAA_1854	BAA_1854		BAA_1854	1666025	1666363	+		transposase%2C IS605 family%2C OrfA%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM TIGR01765	pseudogene	gene1822	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1854
BAA_1855	BAA_1855		BAA_1855	1666366	1667577	+		transposase%2C IS605 family%2C OrfB%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM TIGR01766	pseudogene	gene1823	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1855
BAA_1856	BAA_1856	dsdA	dsdA	1667771	1669165	+	D-serine ammonia-lyase	identified by match to protein family HMM PF00291%3B match to protein family HMM TIGR02035	gene	gene1824	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1856
BAA_1857	BAA_1857		BAA_1857	1669311	1670558	+	conserved hypothetical protein	identified by match to protein family HMM PF04286	gene	gene1825	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1857
BAA_1858	BAA_1858		BAA_1858	1670589	1671545	-	putative lipoprotein		gene	gene1826	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1858
BAA_1859	BAA_1859		BAA_1859	1671542	1672612	-	putative membrane protein		gene	gene1827	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1859
BAA_1860	BAA_1860		BAA_1860	1672609	1673049	-		hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by glimmer%3B putative	pseudogene	gene1828	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1860
BAA_1861	BAA_1861		BAA_1861	1673046	1673528	-	RNA polymerase sigma-70 factor%2C ECF subfamily	identified by match to protein family HMM PF04542%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937	gene	gene1829	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1861
BAA_1862	BAA_1862		BAA_1862	1673812	1674450	+	DNA-binding response regulator%2C LuxR family	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00196	gene	gene1830	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1862
BAA_1863	BAA_1863		BAA_1863	1674455	1675561	+	putative sensor histidine kinase	identified by match to protein family HMM PF02518%3B match to protein family HMM PF07730	gene	gene1831	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1863
BAA_1864	BAA_1864		BAA_1864	1675679	1676617	+	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene1832	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1864
BAA_1865	BAA_1865		BAA_1865	1676655	1677764	+	ABC transporter%2C permease protein	identified by match to protein family HMM PF01061	gene	gene1833	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1865
BAA_1866	BAA_1866		BAA_1866	1677766	1678908	+	putative membrane protein	identified by match to protein family HMM PF01061	gene	gene1834	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1866
BAA_1867	BAA_1867		BAA_1867	1679013	1680230	+	cardiolipin synthetase domain protein	identified by match to protein family HMM PF00614	gene	gene1835	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1867
BAA_1868	BAA_1868	pyrH1	pyrH1	1680285	1681028	-	UMP kinase	identified by match to protein family HMM PF00696%3B match to protein family HMM TIGR02075	gene	gene1836	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1868
BAA_1869	BAA_1869		BAA_1869	1681403	1682674	+	proton/sodium-glutamate symporter	identified by match to protein family HMM PF00375	gene	gene1837	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1869
BAA_1870	BAA_1870	aspA2	aspA2	1682699	1684138	+	aspartate ammonia-lyase	identified by match to protein family HMM PF00206%3B match to protein family HMM TIGR00839	gene	gene1838	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1870
BAA_1871	BAA_1871	malS	malS	1684214	1685926	+	malate oxidoreductase (oxaloacetate-decarboxylating)	identified by match to protein family HMM PF00390%3B match to protein family HMM PF03949	gene	gene1839	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1871
BAA_1872	BAA_1872		BAA_1872	1686001	1687290	+	sensor histidine kinase	identified by match to protein family HMM PF02518	gene	gene1840	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1872
BAA_1873	BAA_1873		BAA_1873	1687293	1688225	+	response regulator	identified by match to protein family HMM PF00072%3B match to protein family HMM PF08664	gene	gene1841	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1873
BAA_1874	BAA_1874		BAA_1874	1688343	1691537	+	putative helicase	identified by match to protein family HMM PF00176%3B match to protein family HMM PF00271%3B match to protein family HMM PF04434%3B match to protein family HMM PF08455	gene	gene1842	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1874
BAA_1875	BAA_1875		BAA_1875	1691629	1691763	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1843	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1875
BAA_1876	BAA_1876	asnA	asnA	1692498	1693481	+	aspartate--ammonia ligase	identified by match to protein family HMM PF03590%3B match to protein family HMM TIGR00669	gene	gene1844	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1876
BAA_1877	BAA_1877		BAA_1877	1693623	1693736	+		conserved hypothetical protein%3B this region contains one or more premature stops and/or frameshifts	pseudogene	gene1845	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1877
BAA_1878	BAA_1878		BAA_1878	1693922	1694215	+		DNA-binding protein%3B this region contains one or more premature stops and/or frameshifts	pseudogene	gene1846	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1878
BAA_1879	BAA_1879		BAA_1879	1694435	1694890	-	conserved hypothetical protein	identified by match to protein family HMM PF00903	gene	gene1847	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1879
BAA_1880	BAA_1880	dapG1	dapG1	1695240	1696469	-	aspartate kinase%2C monofunctional class	identified by match to protein family HMM PF00696%3B match to protein family HMM PF01842%3B match to protein family HMM TIGR00656%3B match to protein family HMM TIGR00657	gene	gene1848	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1880
BAA_1882	BAA_1882		BAA_1882	1697047	1697316	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1849	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1882
BAA_1883	BAA_1883		BAA_1883	1697447	1697950	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1850	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1883
BAA_1884	BAA_1884		BAA_1884	1697954	1698559	+	conserved hypothetical protein		gene	gene1851	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1884
BAA_1885	BAA_1885		BAA_1885	1698565	1700190	+	putative membrane protein		gene	gene1852	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1885
BAA_1886	BAA_1886		BAA_1886	1700253	1700687	-		MutT/NUDIX family protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00293	pseudogene	gene1853	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1886
BAA_1887	BAA_1887		BAA_1887	1700856	1702100	+	N-acetylmuramoyl-L-alanine amidase%2C family 3	identified by match to protein family HMM PF00395%3B match to protein family HMM PF01520	gene	gene1854	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1887
BAA_1888	BAA_1888		BAA_1888	1702354	1703733	+	N-acetylmuramoyl-L-alanine amidase%2C family 4	identified by match to protein family HMM PF00395%3B match to protein family HMM PF01832	gene	gene1855	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1888
BAA_1889	BAA_1889		BAA_1889	1703929	1705191	+	putative transporter	identified by match to protein family HMM PF07690	gene	gene1856	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1889
BAA_1890	BAA_1890		BAA_1890	1705220	1705498	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1857	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1890
BAA_1891	BAA_1891		BAA_1891	1705518	1705982	-	conserved domain protein		gene	gene1858	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1891
BAA_1892	BAA_1892		BAA_1892	1706225	1707667	+	putative carbon starvation protein A	identified by match to protein family HMM PF02554	gene	gene1859	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1892
BAA_1893	BAA_1893		BAA_1893	1707757	1708521	+		conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF03976	pseudogene	gene1860	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1893
BAA_1894	BAA_1894		BAA_1894	1708787	1709131	+		putative multidrug resistance protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1861	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1894
BAA_1895	BAA_1895		BAA_1895	1709109	1710053	+		metabolite transport protein%2C C-terminus%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1862	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1895
BAA_1896	BAA_1896		BAA_1896	1710105	1711088	-	putative 3-oxoacyl-(acyl-carrier-protein) synthase III	identified by match to protein family HMM PF08541%3B match to protein family HMM PF08545%3B match to protein family HMM TIGR00747	gene	gene1863	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1896
BAA_1897	BAA_1897		BAA_1897	1711281	1711817	+	cbiN domain protein		gene	gene1864	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1897
BAA_1898	BAA_1898		BAA_1898	1712301	1713560	+	GTP-binding protein	identified by match to protein family HMM PF01926%3B match to protein family HMM TIGR03156	gene	gene1865	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1898
BAA_1899	BAA_1899		BAA_1899	1713603	1713848	-		putative oligopeptide ABC transporter%2C oligopeptide-binding protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1866	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1899
BAA_1900	BAA_1900		BAA_1900	1714031	1715242	-		ABC transporter%2C solute binding protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00496	pseudogene	gene1867	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1900
BAA_1901	BAA_1901	fsR	fsR	1715488	1716699	+	fosmidomycin resistance protein	identified by match to protein family HMM PF07690	gene	gene1868	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1901
BAA_1902	BAA_1902	cysK2	cysK2	1716710	1717627	+	cysteine synthase A	identified by match to protein family HMM PF00291%3B match to protein family HMM TIGR01136%3B match to protein family HMM TIGR01139	gene	gene1869	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1902
BAA_1903	BAA_1903		BAA_1903	1717704	1718216	+	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene1870	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1903
BAA_1904	BAA_1904		BAA_1904	1718309	1719133	+	conserved domain protein		gene	gene1871	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1904
BAA_1905	BAA_1905		BAA_1905	1719174	1720808	-	polysaccharide synthase family protein	identified by match to protein family HMM PF01554%3B match to protein family HMM PF01943%3B match to protein family HMM PF03023	gene	gene1872	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1905
BAA_1906	BAA_1906		BAA_1906	1721553	1722890	+	sodium-dependent transporter	identified by match to protein family HMM PF00209	gene	gene1873	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1906
BAA_1907	BAA_1907		BAA_1907	1722930	1723634	-	putative polysaccharide deacetylase	identified by match to protein family HMM PF01522	gene	gene1874	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1907
BAA_1908	BAA_1908		BAA_1908	1723965	1724228	+	conserved hypothetical protein		gene	gene1875	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1908
BAA_1909	BAA_1909		BAA_1909	1724409	1725095	+	conserved hypothetical protein	identified by match to protein family HMM PF04239	gene	gene1876	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1909
BAA_1910	BAA_1910		BAA_1910	1725106	1725222	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1877	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1910
BAA_1911	BAA_1911		BAA_1911	1725206	1725847	+	fibronectin-binding protein	identified by match to protein family HMM PF07299	gene	gene1878	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1911
BAA_1912	BAA_1912		BAA_1912	1726311	1726526	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1879	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1912
BAA_1913	BAA_1913		BAA_1913	1726599	1727552	-	putative dehydrogenase	identified by match to protein family HMM PF01210%3B match to protein family HMM PF03446%3B match to protein family HMM PF03807	gene	gene1880	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1913
BAA_1914	BAA_1914		BAA_1914	1727844	1728194	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1881	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1914
BAA_1915	BAA_1915		BAA_1915	1728381	1728581	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1882	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1915
BAA_1916	BAA_1916	msrA1	msrA1	1728749	1729285	-	peptide-methionine (S)-S-oxide reductase	identified by match to protein family HMM PF01625%3B match to protein family HMM TIGR00401	gene	gene1883	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1916
BAA_1917	BAA_1917		BAA_1917	1729377	1730135	-	oxidoreductase%2C short-chain dehydrogenase/reductase family	identified by match to protein family HMM PF00106	gene	gene1884	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1917
BAA_1918	BAA_1918	ilvE2	ilvE2	1731099	1731998	+	branched-chain-amino-acid transaminase	identified by match to protein family HMM PF01063%3B match to protein family HMM TIGR01122	gene	gene1885	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1918
BAA_1919	BAA_1919	ilvB2	ilvB2	1732021	1733733	+	acetolactate synthase%2C large subunit%2C biosynthetic type	identified by match to protein family HMM PF00205%3B match to protein family HMM PF02775%3B match to protein family HMM PF02776%3B match to protein family HMM TIGR00118	gene	gene1886	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1919
BAA_1920	BAA_1920		BAA_1920	1733730	1733942	+	ACT domain protein	identified by match to protein family HMM PF01842	gene	gene1887	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1920
BAA_1921	BAA_1921	ilvC2	ilvC2	1733957	1734964	+	ketol-acid reductoisomerase	identified by match to protein family HMM PF01450%3B match to protein family HMM PF07991%3B match to protein family HMM TIGR00465	gene	gene1888	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1921
BAA_1922	BAA_1922	ilvD	ilvD	1735011	1736684	+	dihydroxy-acid dehydratase	identified by match to protein family HMM PF00920%3B match to protein family HMM TIGR00110	gene	gene1889	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1922
BAA_1923	BAA_1923	ilvA	ilvA	1736716	1737978	+	threonine ammonia-lyase%2C biosynthetic	identified by match to protein family HMM PF00291%3B match to protein family HMM PF00585%3B match to protein family HMM TIGR02079	gene	gene1890	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1923
BAA_1924	BAA_1924		BAA_1924	1738339	1739442	-	conserved hypothetical protein	identified by match to protein family HMM PF09587	gene	gene1891	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1924
BAA_1925	BAA_1925		BAA_1925	1739655	1740371	+	putative membrane protein	identified by match to protein family HMM PF04474	gene	gene1892	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1925
BAA_1926	BAA_1926		BAA_1926	1740387	1741238	+	acetyltransferase%2C GNAT family		gene	gene1893	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1926
BAA_1927	BAA_1927		BAA_1927	1741406	1742620	+	major facilitator family transporter	identified by match to protein family HMM PF00083%3B match to protein family HMM PF07690	gene	gene1894	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1927
BAA_1928	BAA_1928		BAA_1928	1742669	1743430	-	oxidoreductase	identified by match to protein family HMM PF02900	gene	gene1895	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1928
BAA_1929	BAA_1929		BAA_1929	1743633	1744556	+	hydrolase%2C alpha/beta fold family	identified by match to protein family HMM PF00561	gene	gene1896	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1929
BAA_1930	BAA_1930		BAA_1930	1744981	1745625	+	putative methyl-accepting/DNA response regulator	identified by match to protein family HMM PF04397	gene	gene1897	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1930
BAA_1931	BAA_1931		BAA_1931	1745753	1747267	+	acetyl-CoA hydrolase/transferase family protein	identified by match to protein family HMM PF02550%3B match to protein family HMM TIGR03458	gene	gene1898	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1931
BAA_1932	BAA_1932		BAA_1932	1747478	1747921	+	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene1899	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1932
BAA_1933	BAA_1933		BAA_1933	1747949	1748308	+	conserved hypothetical protein		gene	gene1900	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1933
BAA_1934	BAA_1934		BAA_1934	1748380	1749687	+	chlorohydrolase family protein	identified by match to protein family HMM PF01979%3B match to protein family HMM PF07969	gene	gene1901	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1934
BAA_1935	BAA_1935		BAA_1935	1749841	1750929	-	conserved hypothetical protein		gene	gene1902	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1935
BAA_1936	BAA_1936		BAA_1936	1751806	1753365	+		putative oligopeptide ABC transporter%2C oligopeptide-binding protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00496	pseudogene	gene1903	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1936
BAA_1937	BAA_1937		BAA_1937	1753937	1754146	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1904	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1937
BAA_1938	BAA_1938		BAA_1938	1754510	1754890	+	putative lipoprotein		gene	gene1905	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1938
BAA_1939	BAA_1939		BAA_1939	1755025	1755168	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1906	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1939
BAA_1940	BAA_1940		BAA_1940	1755235	1757265	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1907	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1940
BAA_1941	BAA_1941		BAA_1941	1757553	1758686	+	putative coenzyme PQQ synthesis protein	identified by match to protein family HMM PF04055	gene	gene1908	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1941
BAA_1942	BAA_1942		BAA_1942	1758804	1759334	-	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene1909	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1942
BAA_1943	BAA_1943		BAA_1943	1759477	1760175	+	DNA-binding response regulator	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486	gene	gene1910	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1943
BAA_1944	BAA_1944		BAA_1944	1760366	1760554	+		sensor histidine kinase%2C N-terminus%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1911	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1944
BAA_1945	BAA_1945		BAA_1945	1760551	1761231	+		sensory box histidine kinase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518	pseudogene	gene1912	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1945
BAA_1946	BAA_1946		BAA_1946	1761513	1762175	+		peptidase%2C M23/M37 family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01551	pseudogene	gene1913	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1946
BAA_1947	BAA_1947		BAA_1947	1762234	1763529	-	transport protein%2C NRAMP family	identified by match to protein family HMM PF01566%3B match to protein family HMM TIGR01197	gene	gene1914	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1947
BAA_1948	BAA_1948		BAA_1948	1764006	1764965	+	rhodanese-like domain protein	identified by match to protein family HMM PF00581	gene	gene1915	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1948
BAA_1949	BAA_1949		BAA_1949	1765207	1766682	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1916	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1949
BAA_1950	BAA_1950	panE1	panE1	1766857	1767801	+	2-dehydropantoate 2-reductase	identified by match to protein family HMM PF02558%3B match to protein family HMM PF08546%3B match to protein family HMM TIGR00745	gene	gene1917	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1950
BAA_1951	BAA_1951		BAA_1951	1767855	1767983	-	conserved hypothetical protein		gene	gene1918	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1951
BAA_1953	BAA_1953		BAA_1953	1768414	1769511	+		putative membrane protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene1919	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1953
BAA_1954	BAA_1954		BAA_1954	1769584	1770240	+		amino acid permease%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene1920	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1954
BAA_1955	BAA_1955		BAA_1955	1770834	1771994	+	enterotoxin A	identified by match to protein family HMM PF05791	gene	gene1921	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1955
BAA_1956	BAA_1956		BAA_1956	1772026	1773234	+	enterotoxin B	identified by match to protein family HMM PF05791	gene	gene1922	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1956
BAA_1957	BAA_1957		BAA_1957	1773342	1774259	+		enterotoxin C%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF05791	pseudogene	gene1923	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1957
BAA_1958	BAA_1958		BAA_1958	1774655	1775281	+	putative homoserine/threonine efflux protein	identified by match to protein family HMM PF01810	gene	gene1924	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1958
BAA_1959	BAA_1959		BAA_1959	1775639	1776586	+	putative deoxyribonucleoside regulator DeoR	identified by match to protein family HMM PF04198	gene	gene1925	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1959
BAA_1960	BAA_1960	deoC	deoC	1776892	1777563	+	deoxyribose-phosphate aldolase	identified by match to protein family HMM PF01791%3B match to protein family HMM TIGR00126	gene	gene1926	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1960
BAA_1961	BAA_1961		BAA_1961	1777666	1778847	+	nucleoside transporter NupC	identified by match to protein family HMM PF01773%3B match to protein family HMM PF07662%3B match to protein family HMM PF07670%3B match to protein family HMM TIGR00804	gene	gene1927	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1961
BAA_1962	BAA_1962	pyn1	pyn1	1778872	1780185	+	pyrimidine-nucleoside phosphorylase	identified by match to protein family HMM PF00591%3B match to protein family HMM PF02885%3B match to protein family HMM PF07831%3B match to protein family HMM TIGR02644	gene	gene1928	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1962
BAA_1963	BAA_1963	cdd1	cdd1	1780219	1780614	+	cytidine deaminase	identified by match to protein family HMM PF00383%3B match to protein family HMM TIGR01354	gene	gene1929	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1963
BAA_1964	BAA_1964		BAA_1964	1780656	1780805	+		conserved domain protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene1930	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1964
BAA_1965	BAA_1965		BAA_1965	1780919	1781149	-	conserved hypothetical protein	identified by match to protein family HMM PF05979	gene	gene1931	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1965
BAA_1966	BAA_1966		BAA_1966	1781397	1782314	+	putative membrane protein		gene	gene1932	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1966
BAA_1967	BAA_1967		BAA_1967	1782369	1783049	-	putative membrane protein	identified by match to protein family HMM PF02683	gene	gene1933	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1967
BAA_1968	BAA_1968		BAA_1968	1783101	1784084	-	BNR repeat domain protein	identified by match to protein family HMM PF02012	gene	gene1934	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1968
BAA_1969	BAA_1969		BAA_1969	1784305	1785588	+	putative xaa-pro aminopeptidase	identified by match to protein family HMM PF00557%3B match to protein family HMM PF05195	gene	gene1935	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1969
BAA_1970	BAA_1970		BAA_1970	1785706	1787361	+	multicopper oxidase family protein	identified by match to protein family HMM PF00394%3B match to protein family HMM PF07731%3B match to protein family HMM PF07732	gene	gene1936	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1970
BAA_1971	BAA_1971		BAA_1971	1787967	1789661	+	peptidase%2C M23/M37 family	identified by match to protein family HMM PF00018%3B match to protein family HMM PF01551%3B match to protein family HMM PF06347%3B match to protein family HMM PF08239	gene	gene1937	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1971
BAA_1972	BAA_1972		BAA_1972	1789842	1790387	-	putative membrane protein		gene	gene1938	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1972
BAA_1973	BAA_1973	topB2	topB2	1790721	1792865	+	DNA topoisomerase III	identified by match to protein family HMM PF01131%3B match to protein family HMM PF01396%3B match to protein family HMM PF01751%3B match to protein family HMM TIGR01056	gene	gene1939	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1973
BAA_1974	BAA_1974		BAA_1974	1793134	1794381	+	putative membrane protein		gene	gene1940	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1974
BAA_1975	BAA_1975		BAA_1975	1794508	1795473	-	sodium/bile acid symporter family protein	identified by match to protein family HMM PF01758	gene	gene1941	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1975
BAA_1976	BAA_1976		BAA_1976	1795767	1796459	+	conserved hypothetical protein	identified by match to protein family HMM PF02525	gene	gene1942	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1976
BAA_1977	BAA_1977		BAA_1977	1796699	1797121	+		branched-chain amino acid transport system II carrier protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF05525	pseudogene	gene1943	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1977
BAA_1978	BAA_1978	brnQ	brnQ	1797106	1798056	+		branched-chain amino acid transport system II carrier protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF05525%3B match to protein family HMM TIGR00796	pseudogene	gene1944	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1978
BAA_1979	BAA_1979		BAA_1979	1798140	1798559	+	glyoxalase family protein	identified by match to protein family HMM PF00903	gene	gene1945	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1979
BAA_1980	BAA_1980		BAA_1980	1798613	1798777	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1946	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1980
BAA_1982	BAA_1982		BAA_1982	1798889	1800538	+	copper resistance protein	identified by match to protein family HMM PF04234%3B match to protein family HMM PF05425	gene	gene1947	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1982
BAA_1983	BAA_1983		BAA_1983	1800651	1801271	+	conserved hypothetical protein	identified by match to protein family HMM PF07987	gene	gene1948	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1983
BAA_1984	BAA_1984		BAA_1984	1801401	1802177	-	conserved hypothetical protein	identified by match to protein family HMM PF00561	gene	gene1949	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1984
BAA_1985	BAA_1985		BAA_1985	1802364	1803269	-	transporter%2C EamA family	identified by match to protein family HMM PF00892	gene	gene1950	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1985
BAA_1986	BAA_1986		BAA_1986	1803367	1804236	+	transcriptional regulator%2C LysR family	identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466	gene	gene1951	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1986
BAA_1987	BAA_1987		BAA_1987	1804357	1804788	+	rrf2 family protein	identified by match to protein family HMM PF02082	gene	gene1952	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1987
BAA_1988	BAA_1988		BAA_1988	1804860	1805510	+	2-hydroxychromene-2-carboxylate isomerase family protein	identified by match to protein family HMM PF01323	gene	gene1953	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1988
BAA_1989	BAA_1989		BAA_1989	1805568	1806170	+	conserved hypothetical protein	identified by match to protein family HMM PF00881	gene	gene1954	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1989
BAA_1990	BAA_1990		BAA_1990	1806297	1806428	+	conserved hypothetical protein		gene	gene1955	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1990
BAA_1991	BAA_1991		BAA_1991	1806540	1808150	+	amidase family protein	identified by match to protein family HMM PF01425	gene	gene1956	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1991
BAA_1992	BAA_1992		BAA_1992	1808329	1809342	+	putative membrane protein	identified by match to protein family HMM PF01594	gene	gene1957	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1992
BAA_1993	BAA_1993	ldh1	ldh1	1809398	1810342	-	L-lactate dehydrogenase	identified by match to protein family HMM PF00056%3B match to protein family HMM PF02866%3B match to protein family HMM TIGR01771	gene	gene1958	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1993
BAA_1994	BAA_1994		BAA_1994	1810544	1811980	+	amine oxidase%2C flavin-containing	identified by match to protein family HMM PF01593	gene	gene1959	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1994
BAA_1995	BAA_1995		BAA_1995	1812084	1813007	+	cobalamin synthesis protein/P47K family protein	identified by match to protein family HMM PF02492%3B match to protein family HMM PF07683	gene	gene1960	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1995
BAA_1996	BAA_1996		BAA_1996	1813115	1814110	-	putative S-layer protein	identified by match to protein family HMM PF00395	gene	gene1961	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1996
BAA_1997	BAA_1997		BAA_1997	1814468	1815073	+	transcriptional regulator%2C TetR family	identified by match to protein family HMM PF00440	gene	gene1962	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1997
BAA_1998	BAA_1998		BAA_1998	1815086	1816576	+	putative feruloyl-CoA synthetase	identified by match to protein family HMM PF00501	gene	gene1963	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1998
BAA_1999	BAA_1999		BAA_1999	1816581	1816982	+	maoC family protein	identified by match to protein family HMM PF01575	gene	gene1964	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_1999
BAA_2000	BAA_2000		BAA_2000	1816997	1817992	+	conserved hypothetical protein	identified by match to protein family HMM PF08541%3B match to protein family HMM PF08545	gene	gene1965	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2000
BAA_2001	BAA_2001		BAA_2001	1818174	1819391	+	putative branched-chain amino acid ABC transporter%2C branched chain amino acid-binding protein	identified by match to protein family HMM PF01094	gene	gene1966	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2001
BAA_2002	BAA_2002		BAA_2002	1819481	1820254	+	branched-chain amino acid ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene1967	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2002
BAA_2003	BAA_2003		BAA_2003	1820232	1820933	+	branched-chain amino acid ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene1968	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2003
BAA_2004	BAA_2004		BAA_2004	1820955	1821815	+	branched-chain amino acid ABC transporter%2C permease protein	identified by match to protein family HMM PF02653	gene	gene1969	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2004
BAA_2005	BAA_2005		BAA_2005	1821865	1822818	+	branched-chain amino acid ABC transporter%2C permease protein	identified by match to protein family HMM PF02653	gene	gene1970	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2005
BAA_2006	BAA_2006		BAA_2006	1822880	1823668	-	transcriptional regulator%2C LysR family	identified by match to protein family HMM PF00126	gene	gene1971	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2006
BAA_2007	BAA_2007		BAA_2007	1823789	1824337	+	conserved hypothetical protein		gene	gene1972	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2007
BAA_2008	BAA_2008		BAA_2008	1824374	1824781	+	conserved hypothetical protein		gene	gene1973	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2008
BAA_2009	BAA_2009		BAA_2009	1824783	1825094	+	carboxymuconolactone decarboxylase family protein	identified by match to protein family HMM PF02627	gene	gene1974	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2009
BAA_2010	BAA_2010		BAA_2010	1825188	1825631	+	transcriptional regulator%2C MarR family	identified by match to protein family HMM PF01047%3B match to protein family HMM PF03551	gene	gene1975	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2010
BAA_2011	BAA_2011		BAA_2011	1825749	1826807	+	bacterial luciferase family protein	identified by match to protein family HMM PF00296	gene	gene1976	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2011
BAA_2012	BAA_2012	cydA1	cydA1	1827425	1828828	+	cytochrome d ubiquinol oxidase%2C subunit I	identified by match to protein family HMM PF01654	gene	gene1977	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2012
BAA_2013	BAA_2013	cydB1	cydB1	1828815	1829831	+	cytochrome d ubiquinol oxidase%2C subunit II	identified by match to protein family HMM PF02322%3B match to protein family HMM TIGR00203	gene	gene1978	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2013
BAA_2014	BAA_2014		BAA_2014	1829831	1831546	+	transport ATP-binding protein CydC	identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664%3B match to protein family HMM TIGR02857	gene	gene1979	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2014
BAA_2015	BAA_2015		BAA_2015	1831549	1833273	+	transport ATP-binding protein CydD	identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664%3B match to protein family HMM TIGR02868	gene	gene1980	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2015
BAA_2016	BAA_2016		BAA_2016	1833563	1833784	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1981	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2016
BAA_2017	BAA_2017		BAA_2017	1833875	1834321	+	putative lipoprotein		gene	gene1982	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2017
BAA_2018	BAA_2018		BAA_2018	1834409	1835410	-	microcin immunity protein MccF	identified by match to protein family HMM PF02016	gene	gene1983	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2018
BAA_2019	BAA_2019		BAA_2019	1835613	1836470	+	D-alanyl-D-alanine carboxypeptidase family protein	identified by match to protein family HMM PF00768	gene	gene1984	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2019
BAA_2020	BAA_2020		BAA_2020	1836715	1837317	+	conserved hypothetical protein	identified by match to protein family HMM PF00881	gene	gene1985	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2020
BAA_2021	BAA_2021		BAA_2021	1838233	1839495	+	putative cell wall peptidase%2C NlpC/P60 family	identified by match to protein family HMM PF00877%3B match to protein family HMM PF06347%3B match to protein family HMM PF08239	gene	gene1986	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2021
BAA_2022	BAA_2022		BAA_2022	1839594	1840358	-	hydrolase%2C alpha/beta fold family	identified by match to protein family HMM PF00561	gene	gene1987	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2022
BAA_2023	BAA_2023		BAA_2023	1840599	1841225	+		ABC transporter%2C permease/ATP-binding protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene1988	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2023
BAA_2024	BAA_2024		BAA_2024	1841247	1842359	+		multidrug resistance ABC transporter ATP-binding and permease protein%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF00005	pseudogene	gene1989	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2024
BAA_2025	BAA_2025		BAA_2025	1842361	1843125	+	DNA-binding response regulator	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486	gene	gene1990	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2025
BAA_2026	BAA_2026		BAA_2026	1843155	1844195	+	sensor histidine kinase	identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518	gene	gene1991	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2026
BAA_2027	BAA_2027		BAA_2027	1844220	1844807	-	conserved domain protein		gene	gene1992	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2027
BAA_2028	BAA_2028		BAA_2028	1845003	1845722	+	oxidoreductase%2C short-chain dehydrogenase/reductase family	identified by match to protein family HMM PF00106%3B match to protein family HMM PF08659	gene	gene1993	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2028
BAA_2029	BAA_2029		BAA_2029	1845839	1845952	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1994	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2029
BAA_2030	BAA_2030		BAA_2030	1846093	1846965	+	putative aminoglycoside 6-adenylyltransferase	identified by match to protein family HMM PF04439	gene	gene1995	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2030
BAA_2031	BAA_2031		BAA_2031	1847083	1847910	+	putative polysaccharide deacetylase	identified by match to protein family HMM PF01522	gene	gene1996	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2031
BAA_2032	BAA_2032		BAA_2032	1847979	1848107	+		conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene1997	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2032
BAA_2033	BAA_2033		BAA_2033	1848111	1848320	+		conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene1998	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2033
BAA_2034	BAA_2034		BAA_2034	1848368	1848976	-	MutT/NUDIX family protein	identified by match to protein family HMM PF00293	gene	gene1999	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2034
BAA_2035	BAA_2035		BAA_2035	1849060	1849698	+	conserved hypothetical protein	identified by match to protein family HMM PF01243	gene	gene2000	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2035
BAA_2036	BAA_2036	hom1	hom1	1850662	1851957	+	homoserine dehydrogenase	identified by match to protein family HMM PF00742%3B match to protein family HMM PF01842%3B match to protein family HMM PF03447	gene	gene2001	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2036
BAA_2037	BAA_2037	thrC	thrC	1851950	1853008	+	threonine synthase	identified by match to protein family HMM PF00291%3B match to protein family HMM TIGR00260	gene	gene2002	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2037
BAA_2038	BAA_2038	thrB	thrB	1853005	1853898	+	homoserine kinase	identified by match to protein family HMM PF00288%3B match to protein family HMM PF08544%3B match to protein family HMM TIGR00191	gene	gene2003	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2038
BAA_2039	BAA_2039		BAA_2039	1854018	1854227	+	conserved hypothetical protein		gene	gene2004	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2039
BAA_2040	BAA_2040		BAA_2040	1854444	1856741	+	putative lipoprotein		gene	gene2005	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2040
BAA_2041	BAA_2041		BAA_2041	1856946	1857947	+	transcription antiterminator%2C LytR family	identified by match to protein family HMM PF03816%3B match to protein family HMM TIGR00350	gene	gene2006	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2041
BAA_2042	BAA_2042		BAA_2042	1858107	1859354	+	putative lipoprotein		gene	gene2007	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2042
BAA_2043	BAA_2043		BAA_2043	1859365	1860057	+	DNA-binding response regulator	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486	gene	gene2008	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2043
BAA_2044	BAA_2044		BAA_2044	1860036	1861415	+	sensor histidine kinase	identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518	gene	gene2009	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2044
BAA_2045	BAA_2045		BAA_2045	1861516	1862337	+	putative polysaccharide deacetylase	identified by match to protein family HMM PF01522	gene	gene2010	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2045
BAA_2046	BAA_2046		BAA_2046	1862352	1863008	+	putative lipoprotein		gene	gene2011	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2046
BAA_2047	BAA_2047		BAA_2047	1863168	1863848	+	sapB protein	identified by match to protein family HMM PF02308	gene	gene2012	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2047
BAA_2048	BAA_2048		BAA_2048	1863946	1864467	+	conserved hypothetical protein	identified by match to protein family HMM PF00583	gene	gene2013	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2048
BAA_2049	BAA_2049	asbA	asbA	1864752	1866560	+	petrobactin biosynthesis protein AsbA	identified by match to protein family HMM PF04183	gene	gene2014	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2049
BAA_2050	BAA_2050	asbB	asbB	1866625	1868457	+	petrobactin biosynthesis protein AsbB	identified by match to protein family HMM PF04183	gene	gene2015	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2050
BAA_2051	BAA_2051	asbC	asbC	1868444	1869682	+	petrobactin biosynthesis protein AsbC		gene	gene2016	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2051
BAA_2052	BAA_2052	asbD	asbD	1869679	1869954	+		petrobactin biosynthesis aryl carrier protein AsbD%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2017	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2052
BAA_2053	BAA_2053	asbE	asbE	1869978	1870961	+	petrobactin biosynthesis protein AsbE		gene	gene2018	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2053
BAA_2054	BAA_2054	asbF	asbF	1870999	1871841	+	petrobactin biosynthesis protein AsbF	identified by match to protein family HMM PF01261	gene	gene2019	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2054
BAA_2055	BAA_2055		BAA_2055	1871967	1872173	+	Small%2C acid-soluble spore protein%2C alpha/beta family	identified by match to protein family HMM PF00269	gene	gene2020	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2055
BAA_2056	BAA_2056		BAA_2056	1872340	1872546	+		multidrug resistance protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2021	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2056
BAA_2057	BAA_2057		BAA_2057	1872624	1873232	+		transporter protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2022	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2057
BAA_2058	BAA_2058		BAA_2058	1873229	1873618	+		putative multidrug resistance protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2023	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2058
BAA_2059	BAA_2059		BAA_2059	1873672	1874289	-	lysE/yggA family protein	identified by match to protein family HMM PF01810	gene	gene2024	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2059
BAA_2060	BAA_2060		BAA_2060	1874437	1874619	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2025	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2060
BAA_2061	BAA_2061		BAA_2061	1874698	1875663	-	phospholipase%2C patatin family	identified by match to protein family HMM PF01734	gene	gene2026	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2061
BAA_2062	BAA_2062		BAA_2062	1875754	1875894	-	conserved hypothetical protein	identified by match to protein family HMM PF09680%3B match to protein family HMM TIGR01732	gene	gene2027	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2062
BAA_2063	BAA_2063		BAA_2063	1876119	1876871	+	conserved domain protein	identified by match to protein family HMM PF09234	gene	gene2028	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2063
BAA_2064	BAA_2064		BAA_2064	1877017	1878177	+	putative protease	identified by match to protein family HMM PF01841	gene	gene2029	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2064
BAA_2065	BAA_2065		BAA_2065	1878281	1878478	+		hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by glimmer%3B putative	pseudogene	gene2030	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2065
BAA_2066	BAA_2066		BAA_2066	1878510	1878971	+	MutT/NUDIX family protein	identified by match to protein family HMM PF00293	gene	gene2031	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2066
BAA_2067	BAA_2067	nadE	nadE	1879018	1879836	-	NH(3)-dependent NAD(+) synthetase	identified by match to protein family HMM PF02540%3B match to protein family HMM TIGR00552	gene	gene2032	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2067
BAA_2068	BAA_2068		BAA_2068	1879880	1880005	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2033	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2068
BAA_2069	BAA_2069		BAA_2069	1880108	1881346	+		putative membrane protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02687	pseudogene	gene2034	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2069
BAA_2070	BAA_2070		BAA_2070	1881343	1881984	+		ABC transporter%2C permease%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2035	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2070
BAA_2071	BAA_2071		BAA_2071	1882101	1882388	+	putative transition state transcriptional regulatory protein	identified by match to protein family HMM PF04014%3B match to protein family HMM TIGR01439	gene	gene2036	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2071
BAA_2072	BAA_2072		BAA_2072	1882663	1883613	+	intracellular serine protease	identified by match to protein family HMM PF00082	gene	gene2037	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2072
BAA_2073	BAA_2073		BAA_2073	1883654	1883962	-	transcriptional regulator%2C ArsR family	identified by match to protein family HMM PF01022	gene	gene2038	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2073
BAA_2074	BAA_2074		BAA_2074	1884070	1885005	+	oxidoreductase%2C aldo/keto reductase family	identified by match to protein family HMM PF00248	gene	gene2039	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2074
BAA_2075	BAA_2075		BAA_2075	1885208	1886383	+	putative multidrug resistance protein	identified by match to protein family HMM PF00083%3B match to protein family HMM PF07690	gene	gene2040	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2075
BAA_2076	BAA_2076		BAA_2076	1886571	1886795	-	conserved hypothetical protein		gene	gene2041	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2076
BAA_2077	BAA_2077		BAA_2077	1886880	1887227	-	conserved hypothetical protein		gene	gene2042	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2077
BAA_2078	BAA_2078		BAA_2078	1887424	1887951	+	conserved hypothetical protein		gene	gene2043	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2078
BAA_2079	BAA_2079	rsgA_1	rsgA_1	1888131	1889180	+	ribosome small subunit-dependent GTPase A	identified by match to protein family HMM PF01926%3B match to protein family HMM PF03193%3B match to protein family HMM TIGR00157	gene	gene2044	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2079
BAA_2080	BAA_2080		BAA_2080	1889385	1891367	+	methyl-accepting chemotaxis protein	identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672%3B match to protein family HMM PF02743	gene	gene2045	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2080
BAA_2081	BAA_2081		BAA_2081	1891564	1891869	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2046	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2081
BAA_2082	BAA_2082		BAA_2082	1892138	1892488	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2047	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2082
BAA_2083	BAA_2083		BAA_2083	1892523	1893563	-	putative membrane protein		gene	gene2048	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2083
BAA_2084	BAA_2084	dps1	dps1	1893805	1894248	+	DNA protection during starvation protein 1	identified by match to protein family HMM PF00210	gene	gene2049	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2084
BAA_2085	BAA_2085		BAA_2085	1894355	1894810	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2050	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2085
BAA_2086	BAA_2086		BAA_2086	1895035	1895979	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2051	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2086
BAA_2087	BAA_2087		BAA_2087	1896025	1897026	-	bacterial luciferase family protein	identified by match to protein family HMM PF00296%3B match to protein family HMM TIGR03558	gene	gene2052	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2087
BAA_2088	BAA_2088		BAA_2088	1897132	1897323	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2053	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2088
BAA_2089	BAA_2089		BAA_2089	1897501	1898964	+	amine oxidase%2C flavin-containing	identified by match to protein family HMM PF01593	gene	gene2054	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2089
BAA_2090	BAA_2090		BAA_2090	1899049	1899633	+	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene2055	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2090
BAA_2091	BAA_2091		BAA_2091	1899658	1900560	-	oxidoreductase%2C aldo/keto reductase family	identified by match to protein family HMM PF00248	gene	gene2056	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2091
BAA_2092	BAA_2092		BAA_2092	1900726	1901676	+	cobalamin synthesis protein/P47K family protein	identified by match to protein family HMM PF02492%3B match to protein family HMM PF07683	gene	gene2057	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2092
BAA_2093	BAA_2093		BAA_2093	1901775	1902245	-	putative diamine N-acetyltransferase	identified by match to protein family HMM PF00583	gene	gene2058	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2093
BAA_2094	BAA_2094		BAA_2094	1902656	1902802	+		hypothetical protein%3B this region contains one or more premature stops and/or frameshifts%3Bidentified by glimmer%3B putative	pseudogene	gene2059	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2094
BAA_2095	BAA_2095		BAA_2095	1902762	1902938	+	conserved phage protein		gene	gene2060	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2095
BAA_2096	BAA_2096		BAA_2096	1903557	1903751	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2061	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2096
BAA_2097	BAA_2097		BAA_2097	1903896	1904147	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2062	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2097
BAA_2098	BAA_2098		BAA_2098	1904713	1905219	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2063	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2098
BAA_2099	BAA_2099		BAA_2099	1907448	1907726	+	conserved domain protein		gene	gene2064	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2099
BAA_2100	BAA_2100		BAA_2100	1908065	1908511	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2065	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2100
BAA_2101	BAA_2101		BAA_2101	1909143	1909547	+		conserved hypothetical protein%3B this region contains one or more premature stops and/or frameshifts	pseudogene	gene2066	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2101
BAA_2102	BAA_2102		BAA_2102	1909953	1910903	-	putative adhesion lipoprotein	identified by match to protein family HMM PF01297	gene	gene2067	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2102
BAA_2103	BAA_2103		BAA_2103	1911171	1911320	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2068	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2103
BAA_2104	BAA_2104		BAA_2104	1911436	1912095	+	conserved hypothetical protein	identified by match to protein family HMM PF01370	gene	gene2069	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2104
BAA_2105	BAA_2105		BAA_2105	1912125	1913162	-	NADH:flavin oxidoreductase / NADH oxidase family protein	identified by match to protein family HMM PF00724	gene	gene2070	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2105
BAA_2106	BAA_2106	ogt1	ogt1	1913297	1913749	+	methylated-DNA--protein-cysteine S-methyltransferase	identified by match to protein family HMM PF01035%3B match to protein family HMM PF02870%3B match to protein family HMM TIGR00589	gene	gene2071	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2106
BAA_2107	BAA_2107		BAA_2107	1913844	1914770	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2072	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2107
BAA_2108	BAA_2108		BAA_2108	1914847	1916508	+	putative oligopeptide ABC transporter%2C oligopeptide-binding protein	identified by match to protein family HMM PF00496	gene	gene2073	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2108
BAA_2109	BAA_2109	fosB1	fosB1	1916567	1916983	+	metallothiol transferase fosB1	identified by match to protein family HMM PF00903	gene	gene2074	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2109
BAA_2110	BAA_2110		BAA_2110	1916996	1917541	+	conserved hypothetical protein		gene	gene2075	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2110
BAA_2111	BAA_2111		BAA_2111	1917554	1918165	+	phosphoglycerate mutase family protein	identified by match to protein family HMM PF00300	gene	gene2076	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2111
BAA_2112	BAA_2112		BAA_2112	1918210	1918770	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2077	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2112
BAA_2113	BAA_2113	cotH	cotH	1918952	1920028	+	spore coat protein H	identified by match to protein family HMM PF08757	gene	gene2078	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2113
BAA_2114	BAA_2114		BAA_2114	1920134	1920751	+	MutT/NUDIX family protein	identified by match to protein family HMM PF00293	gene	gene2079	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2114
BAA_2115	BAA_2115		BAA_2115	1920856	1921458	+	dedA family protein	identified by match to protein family HMM PF09335	gene	gene2080	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2115
BAA_2116	BAA_2116		BAA_2116	1921561	1922940	+	polysaccharide synthase family protein	identified by match to protein family HMM PF01554%3B match to protein family HMM PF01943%3B match to protein family HMM PF03023	gene	gene2081	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2116
BAA_2117	BAA_2117		BAA_2117	1923125	1924066	+	magnesium transporter%2C CorA family	identified by match to protein family HMM PF01544	gene	gene2082	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2117
BAA_2118	BAA_2118		BAA_2118	1924265	1925161	+	putative membrane protein	identified by match to protein family HMM PF03773	gene	gene2083	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2118
BAA_2119	BAA_2119		BAA_2119	1925165	1926034	+	conserved hypothetical protein	identified by match to protein family HMM PF09323	gene	gene2084	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2119
BAA_2120	BAA_2120		BAA_2120	1926230	1926736	+	cytosolic long-chain acyl-CoA thioester hydrolase family protein	identified by match to protein family HMM PF03061	gene	gene2085	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2120
BAA_2121	BAA_2121		BAA_2121	1927157	1928293	+		cardiolipin synthetase domain protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00614	pseudogene	gene2086	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2121
BAA_2122	BAA_2122		BAA_2122	1928325	1928600	+		putative spore coat protein F%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene2087	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2122
BAA_2123	BAA_2123		BAA_2123	1928634	1928783	+		coat F domain protein%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF07875	pseudogene	gene2088	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2123
BAA_2124	BAA_2124		BAA_2124	1928970	1929149	+	putative lipoprotein		gene	gene2089	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2124
BAA_2125	BAA_2125		BAA_2125	1929251	1929871	+	putative oxidoreductase	identified by match to protein family HMM PF02254	gene	gene2090	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2125
BAA_2126	BAA_2126		BAA_2126	1929896	1930378	-	putative membrane protein	identified by match to protein family HMM PF04306	gene	gene2091	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2126
BAA_2127	BAA_2127		BAA_2127	1930380	1931687	-	CBS domain protein	identified by match to protein family HMM PF00571%3B match to protein family HMM PF01595%3B match to protein family HMM PF03471	gene	gene2092	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2127
BAA_2128	BAA_2128		BAA_2128	1931896	1932765	-	putative membrane protein		gene	gene2093	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2128
BAA_2129	BAA_2129		BAA_2129	1932942	1933589	+	CBS domain protein	identified by match to protein family HMM PF00571	gene	gene2094	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2129
BAA_2130	BAA_2130	brnQ4	brnQ4	1934013	1935365	+	branched-chain amino acid transport system II carrier protein	identified by match to protein family HMM PF05525%3B match to protein family HMM TIGR00796	gene	gene2095	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2130
BAA_2131	BAA_2131	csaA	csaA	1935432	1935761	+	chaperone CsaA	identified by match to protein family HMM PF01588%3B match to protein family HMM TIGR02222	gene	gene2096	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2131
BAA_2132	BAA_2132		BAA_2132	1935779	1936306	+	conserved hypothetical protein	identified by match to protein family HMM PF07609	gene	gene2097	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2132
BAA_2133	BAA_2133		BAA_2133	1936589	1936885	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2098	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2133
BAA_2134	BAA_2134	spoIIP	spoIIP	1936975	1938129	+	stage II sporulation protein P	identified by match to protein family HMM PF07454%3B match to protein family HMM TIGR02867	gene	gene2099	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2134
BAA_2135	BAA_2135		BAA_2135	1938353	1938850	+	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene2100	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2135
BAA_2136	BAA_2136		BAA_2136	1938862	1939602	+	D-alanyl-D-alanine carboxypeptidase family protein	identified by match to protein family HMM PF02557	gene	gene2101	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2136
BAA_2137	BAA_2137		BAA_2137	1939626	1940072	+	MutT/NUDIX family protein	identified by match to protein family HMM PF00293	gene	gene2102	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2137
BAA_2138	BAA_2138		BAA_2138	1940257	1941732	+	amidase family protein	identified by match to protein family HMM PF01425	gene	gene2103	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2138
BAA_2139	BAA_2139		BAA_2139	1941782	1942999	-	putative membrane protein	identified by match to protein family HMM PF07690	gene	gene2104	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2139
BAA_2140	BAA_2140		BAA_2140	1943275	1943703	+	conserved hypothetical protein	identified by match to protein family HMM PF01957	gene	gene2105	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2140
BAA_2141	BAA_2141		BAA_2141	1943706	1944671	+	SPFH domain/Band 7 family protein	identified by match to protein family HMM PF01145	gene	gene2106	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2141
BAA_2142	BAA_2142		BAA_2142	1944778	1945368	+	phosphoglycerate mutase family protein	identified by match to protein family HMM PF00300	gene	gene2107	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2142
BAA_2143	BAA_2143		BAA_2143	1945375	1946151	+	HAD-superfamily hydrolase%2C subfamily IIB	identified by match to protein family HMM PF00702%3B match to protein family HMM PF08282%3B match to protein family HMM TIGR00099%3B match to protein family HMM TIGR01484	gene	gene2108	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2143
BAA_2144	BAA_2144		BAA_2144	1946159	1946620	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2109	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2144
BAA_2145	BAA_2145	dal2	dal2	1946792	1947967	+	alanine racemase	identified by match to protein family HMM PF00842%3B match to protein family HMM PF01168%3B match to protein family HMM TIGR00492	gene	gene2110	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2145
BAA_2146	BAA_2146		BAA_2146	1947988	1948701	-	conserved hypothetical protein	identified by match to protein family HMM PF08241%3B match to protein family HMM PF08242	gene	gene2111	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2146
BAA_2147	BAA_2147		BAA_2147	1948694	1949581	-	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene2112	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2147
BAA_2148	BAA_2148		BAA_2148	1949605	1950483	-	conserved hypothetical protein		gene	gene2113	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2148
BAA_2149	BAA_2149		BAA_2149	1950868	1952079	+	glycosyltransferase%2C MGT family	identified by match to protein family HMM PF00201%3B match to protein family HMM PF04101%3B match to protein family HMM TIGR01426	gene	gene2114	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2149
BAA_2150	BAA_2150		BAA_2150	1952247	1953092	+	conserved hypothetical protein	identified by match to protein family HMM PF02588	gene	gene2115	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2150
BAA_2151	BAA_2151		BAA_2151	1953139	1954539	-	transcriptional regulator%2C GntR family	identified by match to protein family HMM PF00392	gene	gene2116	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2151
BAA_2152	BAA_2152		BAA_2152	1954670	1955092	+	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene2117	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2152
BAA_2153	BAA_2153		BAA_2153	1955240	1955617	+		putative serine/threonine protein phosphatase%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2118	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2153
BAA_2154	BAA_2154		BAA_2154	1955614	1956366	+		serine/threonine protein phosphatase%2C C-terminus%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2119	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2154
BAA_2155	BAA_2155		BAA_2155	1956466	1956996	-		putative membrane protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF07853	pseudogene	gene2120	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2155
BAA_2156	BAA_2156		BAA_2156	1957133	1957690	+	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene2121	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2156
BAA_2157	BAA_2157		BAA_2157	1957669	1957782	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2122	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2157
BAA_2158	BAA_2158		BAA_2158	1957779	1958264	+	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene2123	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2158
BAA_2159	BAA_2159		BAA_2159	1958277	1958645	+	conserved hypothetical protein		gene	gene2124	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2159
BAA_2160	BAA_2160		BAA_2160	1958666	1958860	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2125	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2160
BAA_2161	BAA_2161		BAA_2161	1958861	1959046	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2126	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2161
BAA_2162	BAA_2162		BAA_2162	1959123	1959281	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2127	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2162
BAA_2163	BAA_2163		BAA_2163	1959662	1959853	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2128	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2163
BAA_2164	BAA_2164		BAA_2164	1960267	1960434	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2129	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2164
BAA_2165	BAA_2165		BAA_2165	1960597	1960920	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2130	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2165
BAA_2166	BAA_2166		BAA_2166	1961192	1961305	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2131	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2166
BAA_2167	BAA_2167		BAA_2167	1961888	1962313	+	conserved hypothetical protein	identified by match to protein family HMM PF09579%3B match to protein family HMM TIGR02874	gene	gene2132	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2167
BAA_2168	BAA_2168		BAA_2168	1962474	1963241	+	conserved hypothetical protein		gene	gene2133	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2168
BAA_2169	BAA_2169		BAA_2169	1963293	1963613	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2134	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2169
BAA_2170	BAA_2170		BAA_2170	1963683	1963895	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2135	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2170
BAA_2171	BAA_2171		BAA_2171	1963925	1964233	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2136	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2171
BAA_2172	BAA_2172		BAA_2172	1964470	1965180	+	conserved hypothetical protein	identified by match to protein family HMM PF01209%3B match to protein family HMM PF08241%3B match to protein family HMM PF08242	gene	gene2137	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2172
BAA_2173	BAA_2173	fhs	fhs	1965244	1966932	+	formate--tetrahydrofolate ligase	identified by match to protein family HMM PF01268	gene	gene2138	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2173
BAA_2174	BAA_2174		BAA_2174	1967023	1967550	+	group-specific protein		gene	gene2139	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2174
BAA_2175	BAA_2175		BAA_2175	1967570	1968739	+	ATP-dependent RNA helicase%2C DEAD/DEAH box family	identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF04851	gene	gene2140	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2175
BAA_2176	BAA_2176		BAA_2176	1968882	1969328	+	conserved hypothetical protein		gene	gene2141	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2176
BAA_2177	BAA_2177		BAA_2177	1969384	1969767	+	glyoxalase family protein	identified by match to protein family HMM PF00903	gene	gene2142	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2177
BAA_2178	BAA_2178		BAA_2178	1969813	1970451	-	conserved hypothetical protein		gene	gene2143	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2178
BAA_2179	BAA_2179		BAA_2179	1970481	1971470	-	oxidoreductase%2C zinc-binding dehydrogenase family	identified by match to protein family HMM PF00107%3B match to protein family HMM PF08240	gene	gene2144	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2179
BAA_2180	BAA_2180		BAA_2180	1971673	1972251	+	RNA polymerase sigma-70 factor%2C ECF subfamily	identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937	gene	gene2145	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2180
BAA_2181	BAA_2181		BAA_2181	1972248	1972928	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2146	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2181
BAA_2182	BAA_2182		BAA_2182	1972986	1973420	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2147	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2182
BAA_2183	BAA_2183		BAA_2183	1973505	1974476	-	metallo-beta-lactamase family protein	identified by match to protein family HMM PF00753	gene	gene2148	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2183
BAA_2184	BAA_2184		BAA_2184	1974574	1974783	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2149	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2184
BAA_2185	BAA_2185	bsaA	bsaA	1975009	1975491	+	glutathione peroxidase	identified by match to protein family HMM PF00255	gene	gene2150	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2185
BAA_2186	BAA_2186		BAA_2186	1975575	1977482	-	putative membrane-bound protease	identified by match to protein family HMM PF01841	gene	gene2151	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2186
BAA_2187	BAA_2187		BAA_2187	1977800	1979014	-	conserved hypothetical protein	identified by match to protein family HMM PF01882	gene	gene2152	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2187
BAA_2188	BAA_2188		BAA_2188	1979014	1979904	-	conserved hypothetical protein	identified by match to protein family HMM PF07726%3B match to protein family HMM PF07728	gene	gene2153	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2188
BAA_2189	BAA_2189		BAA_2189	1980293	1980634	-	conserved hypothetical protein		gene	gene2154	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2189
BAA_2190	BAA_2190		BAA_2190	1980727	1981227	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2155	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2190
BAA_2191	BAA_2191	narG	narG	1981706	1985389	+	respiratory nitrate reductase%2C alpha subunit	identified by match to protein family HMM PF00384%3B match to protein family HMM PF01568%3B match to protein family HMM TIGR01580	gene	gene2156	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2191
BAA_2192	BAA_2192	narH	narH	1985379	1986854	+	respiratory nitrate reductase%2C beta subunit	identified by match to protein family HMM TIGR01660	gene	gene2157	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2192
BAA_2193	BAA_2193	narJ	narJ	1986874	1987404	+	nitrate reductase molybdenum cofactor assembly chaperone	identified by match to protein family HMM PF02613%3B match to protein family HMM TIGR00684	gene	gene2158	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2193
BAA_2194	BAA_2194	narI	narI	1987422	1988111	+	respiratory nitrate reductase%2C gamma subunit	identified by match to protein family HMM PF02665%3B match to protein family HMM TIGR00351	gene	gene2159	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2194
BAA_2195	BAA_2195		BAA_2195	1988443	1988829	+	transcriptional regulator%2C GntR family	identified by match to protein family HMM PF00392	gene	gene2160	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2195
BAA_2196	BAA_2196		BAA_2196	1988826	1989692	+	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene2161	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2196
BAA_2197	BAA_2197		BAA_2197	1989682	1990152	+		hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by glimmer%3B putative	pseudogene	gene2162	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2197
BAA_2198	BAA_2198		BAA_2198	1990712	1991404	-	transcriptional regulator%2C Crp/Fnr family	identified by match to protein family HMM PF00027%3B match to protein family HMM PF00325	gene	gene2163	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2198
BAA_2199	BAA_2199	narA1	narA1	1991683	1992696	+	molybdenum cofactor biosynthesis protein A	identified by match to protein family HMM PF04055%3B match to protein family HMM PF06463%3B match to protein family HMM TIGR02666	gene	gene2164	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2199
BAA_2200	BAA_2200		BAA_2200	1992714	1993727	+	putative molybdopterin biosynthesis protein MoeB	identified by match to protein family HMM PF00899%3B match to protein family HMM PF05237	gene	gene2165	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2200
BAA_2201	BAA_2201	moeA1	moeA1	1993770	1995059	+	molybdopterin biosynthesis protein MoeA	identified by match to protein family HMM PF00994%3B match to protein family HMM PF03453%3B match to protein family HMM PF03454%3B match to protein family HMM TIGR00177	gene	gene2166	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2201
BAA_2202	BAA_2202	moaE1	moaE1	1995104	1995574	+	molybdopterin converting factor%2C subunit 2	identified by match to protein family HMM PF02391	gene	gene2167	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2202
BAA_2203	BAA_2203	moaD1	moaD1	1995571	1995804	+	molybdopterin converting factor%2C subunit 1	identified by match to protein family HMM PF02597%3B match to protein family HMM TIGR01682	gene	gene2168	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2203
BAA_2204	BAA_2204	narK	narK	1995885	1997054	+	nitrate transporter	identified by match to protein family HMM PF07690	gene	gene2169	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2204
BAA_2205	BAA_2205		BAA_2205	1997406	1998323	+	putative membrane protein	identified by match to protein family HMM PF03547	gene	gene2170	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2205
BAA_2206	BAA_2206		BAA_2206	1998728	1999024	+	conserved domain protein		gene	gene2171	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2206
BAA_2207	BAA_2207		BAA_2207	1999215	1999688	-	siroheme synthase%2C precorrin 2 oxidase and ferrochelatase domains	identified by match to protein family HMM TIGR01470	gene	gene2172	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2207
BAA_2208	BAA_2208		BAA_2208	1999681	2000391	-	cbiX domain protein	identified by match to protein family HMM PF01903	gene	gene2173	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2208
BAA_2209	BAA_2209		BAA_2209	2000388	2001812	-	putative uroporphyrin-III C-methyltransferase	identified by match to protein family HMM PF00590%3B match to protein family HMM TIGR01469	gene	gene2174	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2209
BAA_2210	BAA_2210	nirD	nirD	2001838	2002194	-	nitrite reductase [NAD(P)H]%2C small subunit	identified by match to protein family HMM PF00355%3B match to protein family HMM TIGR02378	gene	gene2175	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2210
BAA_2211	BAA_2211	nirB	nirB	2002210	2004615	-	nitrite reductase (NAD(P)H)%2C large subunit	identified by match to protein family HMM PF00070%3B match to protein family HMM PF01077%3B match to protein family HMM PF03460%3B match to protein family HMM PF04324%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR02374	gene	gene2176	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2211
BAA_2212	BAA_2212	ric	ric	2004827	2005534	-	iron-sulfur cluster repair di-iron protein	identified by match to protein family HMM PF01814%3B match to protein family HMM PF04405%3B match to protein family HMM TIGR03652	gene	gene2177	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2212
BAA_2213	BAA_2213		BAA_2213	2005812	2006381	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2178	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2213
BAA_2214	BAA_2214		BAA_2214	2006506	2007507	-	conserved domain protein	identified by match to protein family HMM PF05901	gene	gene2179	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2214
BAA_2215	BAA_2215		BAA_2215	2007707	2007859	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2180	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2215
BAA_2216	BAA_2216		BAA_2216	2008075	2008284	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2181	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2216
BAA_2217	BAA_2217		BAA_2217	2008380	2009219	-	N-acetyltransferase family protein	identified by match to protein family HMM PF00797	gene	gene2182	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2217
BAA_2218	BAA_2218		BAA_2218	2009770	2011371	+	conserved hypothetical protein	identified by match to protein family HMM PF07819	gene	gene2183	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2218
BAA_2219	BAA_2219	spoVS1	spoVS1	2011801	2012076	+	stage V sporulation protein S	identified by match to protein family HMM PF04232	gene	gene2184	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2219
BAA_2220	BAA_2220		BAA_2220	2012171	2012671	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2185	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2220
BAA_2221	BAA_2221		BAA_2221	2013344	2013655	+		conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2186	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2221
BAA_2222	BAA_2222		BAA_2222	2013887	2014054	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2187	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2222
BAA_2223	BAA_2223		BAA_2223	2014262	2015008	-	conserved domain protein		gene	gene2188	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2223
BAA_2224	BAA_2224		BAA_2224	2014969	2015121	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2189	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2224
BAA_2225	BAA_2225		BAA_2225	2015118	2015765	+	HD domain protein	identified by match to protein family HMM PF01966	gene	gene2190	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2225
BAA_2226	BAA_2226		BAA_2226	2015762	2017657	+	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene2191	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2226
BAA_2227	BAA_2227		BAA_2227	2017733	2018464	+	putative membrane protein	identified by match to protein family HMM PF06539	gene	gene2192	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2227
BAA_2228	BAA_2228		BAA_2228	2018570	2018824	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2193	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2228
BAA_2229	BAA_2229	ssb2	ssb2	2018983	2019321	+	single-stranded DNA-binding protein	identified by match to protein family HMM PF00436%3B match to protein family HMM PF01336%3B match to protein family HMM TIGR00621	gene	gene2194	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2229
BAA_2230	BAA_2230		BAA_2230	2019347	2019937	-	transcriptional regulator%2C TetR family	identified by match to protein family HMM PF00440	gene	gene2195	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2230
BAA_2231	BAA_2231		BAA_2231	2020039	2020407	-		monooxygenase%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene2196	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2231
BAA_2232	BAA_2232		BAA_2232	2020693	2021130	-		FAD binding domain%3B this region contains one or more premature stops and/or frameshifts	pseudogene	gene2197	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2232
BAA_2233	BAA_2233		BAA_2233	2021430	2022557	+	PBS lyase HEAT-like repeat domain protein	identified by match to protein family HMM PF03130	gene	gene2198	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2233
BAA_2234	BAA_2234		BAA_2234	2022561	2022944	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2199	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2234
BAA_2235	BAA_2235		BAA_2235	2023028	2023462	+	conserved hypothetical protein	identified by match to protein family HMM PF06491	gene	gene2200	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2235
BAA_2236	BAA_2236		BAA_2236	2023512	2024288	+	conserved hypothetical protein		gene	gene2201	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2236
BAA_2237	BAA_2237	argS1	argS1	2024589	2026277	+	arginine--tRNA ligase	identified by match to protein family HMM PF00750%3B match to protein family HMM PF03485%3B match to protein family HMM PF05746%3B match to protein family HMM TIGR00456	gene	gene2202	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2237
BAA_2238	BAA_2238		BAA_2238	2026494	2026721	+	conserved hypothetical protein		gene	gene2203	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2238
BAA_2239	BAA_2239		BAA_2239	2026751	2026969	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2204	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2239
BAA_2240	BAA_2240		BAA_2240	2027106	2027984	+	conserved hypothetical protein	identified by match to protein family HMM PF08241%3B match to protein family HMM PF08242	gene	gene2205	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2240
BAA_2241	BAA_2241		BAA_2241	2028354	2030354	+		tetratricopeptide repeat protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene2206	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2241
BAA_2242	BAA_2242		BAA_2242	2030430	2032556	+		TPR-repeat-containing protein%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719	pseudogene	gene2207	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2242
BAA_2243	BAA_2243	ileS1	ileS1	2032949	2036050	+	isoleucine--tRNA ligase	identified by match to protein family HMM PF00133%3B match to protein family HMM PF08264%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00392	gene	gene2208	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2243
BAA_2244	BAA_2244		BAA_2244	2036371	2037882	+	putative neutral metalloprotease	identified by match to protein family HMM PF03413%3B match to protein family HMM PF07504	gene	gene2209	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2244
BAA_2245	BAA_2245		BAA_2245	2037986	2038468	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2210	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2245
BAA_2246	BAA_2246		BAA_2246	2038550	2039290	+		UDP-N-acetylmuramoylalanyl-D-glutamyl-2%2C6-diaminopimelate--D-alanyl-D-alanyl ligase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01225%3B match to protein family HMM PF08245	pseudogene	gene2211	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2246
BAA_2247	BAA_2247	aspS1	aspS1	2039510	2040808	+	aspartate--tRNA ligase	identified by match to protein family HMM PF00152%3B match to protein family HMM PF01336%3B match to protein family HMM TIGR00458	gene	gene2212	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2247
BAA_2248	BAA_2248		BAA_2248	2041009	2041773	+	conserved hypothetical protein		gene	gene2213	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2248
BAA_2249	BAA_2249		BAA_2249	2041786	2042559	+	conserved domain protein		gene	gene2214	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2249
BAA_2250	BAA_2250		BAA_2250	2042588	2042950	+	conserved domain protein		gene	gene2215	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2250
BAA_2251	BAA_2251		BAA_2251	2042982	2046989	+	FtsK/SpoIIIE family protein	identified by match to protein family HMM PF01580	gene	gene2216	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2251
BAA_2252	BAA_2252		BAA_2252	2047117	2047389	+	conserved hypothetical protein	identified by match to protein family HMM PF06013	gene	gene2217	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2252
BAA_2253	BAA_2253		BAA_2253	2047473	2048879	+		hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by glimmer%3B putative	pseudogene	gene2218	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2253
BAA_2254	BAA_2254		BAA_2254	2048869	2050149	+		TPR domain protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00515	pseudogene	gene2219	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2254
BAA_2255	BAA_2255		BAA_2255	2050173	2050646	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2220	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2255
BAA_2256	BAA_2256		BAA_2256	2050637	2051290	+		group-specific protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2221	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2256
BAA_2257	BAA_2257		BAA_2257	2051380	2052774	+		group-specific protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2222	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2257
BAA_2258	BAA_2258		BAA_2258	2052845	2053282	+	conserved domain protein		gene	gene2223	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2258
BAA_2259	BAA_2259		BAA_2259	2053519	2054754	+	conserved domain protein		gene	gene2224	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2259
BAA_2260	BAA_2260		BAA_2260	2054781	2055137	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2225	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2260
BAA_2261	BAA_2261		BAA_2261	2055351	2055485	+	conserved hypothetical protein		gene	gene2226	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2261
BAA_2262	BAA_2262		BAA_2262	2055598	2055735	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2227	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2262
BAA_2263	BAA_2263		BAA_2263	2055720	2056502	+	putative site-specific recombinase%2C resolvase family	identified by match to protein family HMM PF00239%3B match to protein family HMM PF07508	gene	gene2228	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2263
BAA_2264	BAA_2264		BAA_2264	2056661	2057434	+		transposase%2C IS110 family%2C OrfA%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01548	pseudogene	gene2229	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2264
BAA_2265	BAA_2265		BAA_2265	2057431	2057895	+		transposase%2C IS110 family%2C OrfB%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02371	pseudogene	gene2230	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2265
BAA_2266	BAA_2266		BAA_2266	2058153	2058434	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2231	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2266
BAA_2267	BAA_2267		BAA_2267	2058448	2059146	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2232	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2267
BAA_2268	BAA_2268		BAA_2268	2059706	2060338	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2233	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2268
BAA_2269	BAA_2269		BAA_2269	2060373	2060762	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2234	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2269
BAA_2270	BAA_2270		BAA_2270	2061275	2061853	+		group-specific protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene2235	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2270
BAA_2271	BAA_2271		BAA_2271	2061902	2062105	+		conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene2236	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2271
BAA_2272	BAA_2272		BAA_2272	2062652	2063836	+	conserved hypothetical protein TIGR00045	identified by match to protein family HMM PF02595%3B match to protein family HMM TIGR00045	gene	gene2237	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2272
BAA_2273	BAA_2273		BAA_2273	2063833	2065263	+	sodium/solute symporter family protein	identified by match to protein family HMM PF00939	gene	gene2238	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2273
BAA_2274	BAA_2274		BAA_2274	2065392	2066075	+	DNA-binding response regulator	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486	gene	gene2239	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2274
BAA_2275	BAA_2275		BAA_2275	2066079	2067437	+	sensor histidine kinase	identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518	gene	gene2240	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2275
BAA_2276	BAA_2276		BAA_2276	2067457	2068416	+	conserved domain protein	identified by match to protein family HMM PF03413	gene	gene2241	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2276
BAA_2277	BAA_2277		BAA_2277	2068525	2068908	+	conserved domain protein	identified by match to protein family HMM PF03413	gene	gene2242	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2277
BAA_2278	BAA_2278		BAA_2278	2069403	2070743	+	putative sodium-dependent transporter	identified by match to protein family HMM PF00209	gene	gene2243	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2278
BAA_2279	BAA_2279		BAA_2279	2070784	2071689	+	hydrolase%2C alpha/beta fold family	identified by match to protein family HMM PF00561	gene	gene2244	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2279
BAA_2280	BAA_2280		BAA_2280	2071726	2072301	-	conserved hypothetical protein	identified by match to protein family HMM PF06042	gene	gene2245	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2280
BAA_2281	BAA_2281		BAA_2281	2072334	2073131	-	putative membrane protein		gene	gene2246	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2281
BAA_2282	BAA_2282		BAA_2282	2073330	2073995	+	hydrolase%2C haloacid dehalogenase-like family	identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01549	gene	gene2247	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2282
BAA_2283	BAA_2283		BAA_2283	2074205	2075644	+	putative membrane protein	identified by match to protein family HMM PF03600	gene	gene2248	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2283
BAA_2284	BAA_2284		BAA_2284	2075697	2076899	+	alcohol dehydrogenase%2C iron-containing	identified by match to protein family HMM PF00465	gene	gene2249	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2284
BAA_2285	BAA_2285		BAA_2285	2077047	2077754	+	aspartate racemase family protein	identified by match to protein family HMM PF01177%3B match to protein family HMM TIGR00035	gene	gene2250	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2285
BAA_2286	BAA_2286		BAA_2286	2077829	2078302	+	conserved hypothetical protein	identified by match to protein family HMM PF01980	gene	gene2251	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2286
BAA_2287	BAA_2287		BAA_2287	2078299	2078739	+	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene2252	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2287
BAA_2288	BAA_2288		BAA_2288	2078796	2078984	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2253	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2288
BAA_2289	BAA_2289		BAA_2289	2078971	2079330	-		hydrolase%2C had-superfamily%2C subfamily iiia%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2254	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2289
BAA_2290	BAA_2290		BAA_2290	2079360	2079791	-	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene2255	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2290
BAA_2291	BAA_2291		BAA_2291	2079945	2080655	+	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene2256	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2291
BAA_2292	BAA_2292		BAA_2292	2080648	2081706	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2257	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2292
BAA_2293	BAA_2293		BAA_2293	2081661	2081849	+		conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2258	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2293
BAA_2294	BAA_2294		BAA_2294	2082132	2082719	+	conserved hypothetical protein		gene	gene2259	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2294
BAA_2295	BAA_2295		BAA_2295	2082825	2083460	+	hydrolase%2C haloacid dehalogenase-like family	identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01549	gene	gene2260	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2295
BAA_2296	BAA_2296		BAA_2296	2083540	2083848	+	conserved hypothetical protein		gene	gene2261	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2296
BAA_2297	BAA_2297		BAA_2297	2083861	2084793	+	conserved hypothetical protein	identified by match to protein family HMM PF01636	gene	gene2262	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2297
BAA_2298	BAA_2298		BAA_2298	2084830	2086107	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2263	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2298
BAA_2299	BAA_2299		BAA_2299	2086235	2087692	-	conserved hypothetical protein	identified by match to protein family HMM PF00144	gene	gene2264	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2299
BAA_2300	BAA_2300	thyA	thyA	2087891	2088847	+	thymidylate synthase	identified by match to protein family HMM PF00303%3B match to protein family HMM TIGR03284	gene	gene2265	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2300
BAA_2301	BAA_2301	dfrA	dfrA	2088867	2089355	+	dihydrofolate reductase	identified by match to protein family HMM PF00186	gene	gene2266	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2301
BAA_2302	BAA_2302	pbpC	pbpC	2089511	2091496	+	penicillin-binding protein 3	identified by match to protein family HMM PF00905%3B match to protein family HMM PF03717%3B match to protein family HMM PF05223	gene	gene2267	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2302
BAA_2303	BAA_2303		BAA_2303	2091739	2092374	+	conserved hypothetical protein	identified by match to protein family HMM PF02525%3B match to protein family HMM PF03358	gene	gene2268	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2303
BAA_2304	BAA_2304		BAA_2304	2092486	2093205	+	putative 1-acyl-sn-glycerol-3-phosphate acyltransferase	identified by match to protein family HMM PF01553%3B match to protein family HMM TIGR00530	gene	gene2269	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2304
BAA_2305	BAA_2305		BAA_2305	2093246	2093902	-	hemolysin III	identified by match to protein family HMM PF03006%3B match to protein family HMM TIGR01065	gene	gene2270	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2305
BAA_2306	BAA_2306		BAA_2306	2094116	2094301	+	twin-arginine translocation protein%2C TatA/E family	identified by match to protein family HMM PF02416%3B match to protein family HMM TIGR01411	gene	gene2271	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2306
BAA_2307	BAA_2307		BAA_2307	2094344	2095087	+	TatCD protein	identified by match to protein family HMM PF00902%3B match to protein family HMM TIGR00945	gene	gene2272	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2307
BAA_2308	BAA_2308		BAA_2308	2095409	2095681	+	conserved hypothetical protein		gene	gene2273	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2308
BAA_2309	BAA_2309		BAA_2309	2095813	2096682	+	degV family protein	identified by match to protein family HMM PF02645%3B match to protein family HMM TIGR00762	gene	gene2274	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2309
BAA_2310	BAA_2310		BAA_2310	2096883	2097857	-	conserved hypothetical protein	identified by match to protein family HMM PF00753	gene	gene2275	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2310
BAA_2311	BAA_2311		BAA_2311	2098193	2098780	+	SCO1/SenC family lipoprotein	identified by match to protein family HMM PF02630	gene	gene2276	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2311
BAA_2312	BAA_2312		BAA_2312	2098822	2099283	-	heat shock protein%2C Hsp20 family	identified by match to protein family HMM PF00011%3B match to protein family HMM PF04969	gene	gene2277	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2312
BAA_2313	BAA_2313	asnO3	asnO3	2099501	2101402	+	asparagine synthetase%2C glutamine-hydrolyzing	identified by match to protein family HMM PF00310%3B match to protein family HMM PF00733%3B match to protein family HMM TIGR01536	gene	gene2278	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2313
BAA_2314	BAA_2314		BAA_2314	2101496	2101855	+	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene2279	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2314
BAA_2315	BAA_2315		BAA_2315	2101898	2102233	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2280	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2315
BAA_2316	BAA_2316		BAA_2316	2102396	2102521	+	conserved domain protein		gene	gene2281	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2316
BAA_2317	BAA_2317		BAA_2317	2102667	2103629	+	putative iron compound-binding protein	identified by match to protein family HMM PF01497	gene	gene2282	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2317
BAA_2318	BAA_2318	dat1	dat1	2103761	2104636	+	D-amino-acid transaminase	identified by match to protein family HMM PF01063%3B match to protein family HMM TIGR01121	gene	gene2283	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2318
BAA_2319	BAA_2319		BAA_2319	2104735	2105382	+	nitroreductase family protein	identified by match to protein family HMM PF00881	gene	gene2284	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2319
BAA_2320	BAA_2320		BAA_2320	2105642	2106130	+	putative lipoprotein		gene	gene2285	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2320
BAA_2321	BAA_2321		BAA_2321	2106258	2106452	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2286	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2321
BAA_2322	BAA_2322		BAA_2322	2106803	2107111	+		isochorismatase family protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00857	pseudogene	gene2287	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2322
BAA_2323	BAA_2323		BAA_2323	2107173	2107595	-		MutT/NUDIX family protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00293	pseudogene	gene2288	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2323
BAA_2324	BAA_2324		BAA_2324	2107821	2108258	+	heat shock protein%2C Hsp20 family	identified by match to protein family HMM PF00011	gene	gene2289	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2324
BAA_2325	BAA_2325		BAA_2325	2108557	2109450	+	mechanosensitive ion channel family protein	identified by match to protein family HMM PF00924	gene	gene2290	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2325
BAA_2326	BAA_2326		BAA_2326	2109601	2110719	+	sensor histidine kinase	identified by match to protein family HMM PF01590%3B match to protein family HMM PF02518%3B match to protein family HMM PF07730	gene	gene2291	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2326
BAA_2327	BAA_2327		BAA_2327	2110733	2111362	+	DNA-binding response regulator%2C LuxR family	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00196%3B match to protein family HMM PF08281	gene	gene2292	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2327
BAA_2328	BAA_2328		BAA_2328	2111368	2111499	+		SIS domain protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene2293	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2328
BAA_2329	BAA_2329		BAA_2329	2111509	2111898	+		transcriptional regulator%2C RpiR family%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF01380	pseudogene	gene2294	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2329
BAA_2330	BAA_2330		BAA_2330	2112187	2113224	+	putative alcohol dehydrogenase%2C zinc-containing	identified by match to protein family HMM PF00107%3B match to protein family HMM PF08240	gene	gene2295	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2330
BAA_2331	BAA_2331		BAA_2331	2113375	2114394	-	putative membrane protein	identified by match to protein family HMM PF00528	gene	gene2296	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2331
BAA_2332	BAA_2332		BAA_2332	2114391	2115293	-	putative membrane protein	identified by match to protein family HMM PF00528	gene	gene2297	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2332
BAA_2333	BAA_2333		BAA_2333	2115942	2116583	+		putative D-alanyl-D-alanine carboxypeptidase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00144	pseudogene	gene2298	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2333
BAA_2334	BAA_2334		BAA_2334	2116678	2117100	+		putative alkaline D-peptidase homolog%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2299	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2334
BAA_2335	BAA_2335		BAA_2335	2117254	2118291	+		conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene2300	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2335
BAA_2336	BAA_2336		BAA_2336	2118445	2118585	+		succinoglycan biosynthesis protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene2301	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2336
BAA_2337	BAA_2337		BAA_2337	2119078	2119275	+		conserved domain protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene2302	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2337
BAA_2338	BAA_2338		BAA_2338	2119318	2119536	+		sugar kinase domain protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene2303	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2338
BAA_2339	BAA_2339		BAA_2339	2119688	2120908	+	glycosyl transferase%2C group 2 family	identified by match to protein family HMM PF00535	gene	gene2304	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2339
BAA_2340	BAA_2340		BAA_2340	2120943	2122097	+	conserved hypothetical protein		gene	gene2305	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2340
BAA_2341	BAA_2341		BAA_2341	2122243	2122779	+	NAD(P)H dehydrogenase (quinone)	identified by match to protein family HMM PF03358	gene	gene2306	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2341
BAA_2342	BAA_2342		BAA_2342	2122781	2124010	+	putative permease	identified by match to protein family HMM PF07690	gene	gene2307	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2342
BAA_2343	BAA_2343		BAA_2343	2124074	2124631	+	conserved hypothetical protein	identified by match to protein family HMM PF02698	gene	gene2308	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2343
BAA_2344	BAA_2344	proV1	proV1	2124734	2125681	+	glycine betaine/L-proline ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR01186	gene	gene2309	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2344
BAA_2345	BAA_2345		BAA_2345	2125685	2127196	+	glycine betaine/L-proline ABC transporter%2C permease and substrate-binding protein	identified by match to protein family HMM PF00528%3B match to protein family HMM PF04069	gene	gene2310	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2345
BAA_2346	BAA_2346	arcD	arcD	2127410	2128837	+	arginine/ornithine antiporter	identified by match to protein family HMM PF00324%3B match to protein family HMM TIGR00905	gene	gene2311	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2346
BAA_2347	BAA_2347		BAA_2347	2128914	2129174	+	lemA domain protein		gene	gene2312	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2347
BAA_2348	BAA_2348		BAA_2348	2129280	2131100	+	conserved domain protein	identified by match to protein family HMM PF07728	gene	gene2313	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2348
BAA_2349	BAA_2349		BAA_2349	2131090	2132940	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2314	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2349
BAA_2350	BAA_2350		BAA_2350	2133217	2133813	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2315	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2350
BAA_2351	BAA_2351		BAA_2351	2133909	2134451	-	conserved hypothetical protein		gene	gene2316	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2351
BAA_2352	BAA_2352		BAA_2352	2134806	2136161	+	CBS domain protein	identified by match to protein family HMM PF00571%3B match to protein family HMM PF01595%3B match to protein family HMM PF03471	gene	gene2317	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2352
BAA_2353	BAA_2353		BAA_2353	2136294	2137718	+	aldehyde dehydrogenase family protein	identified by match to protein family HMM PF00171	gene	gene2318	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2353
BAA_2354	BAA_2354		BAA_2354	2137838	2138230	-	conserved hypothetical protein	identified by match to protein family HMM PF07997	gene	gene2319	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2354
BAA_2355	BAA_2355		BAA_2355	2138461	2139594	+	sensor histidine kinase	identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518%3B match to protein family HMM PF09385	gene	gene2320	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2355
BAA_2356	BAA_2356		BAA_2356	2139628	2140377	-	conserved hypothetical protein		gene	gene2321	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2356
BAA_2357	BAA_2357		BAA_2357	2140918	2141031	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2322	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2357
BAA_2358	BAA_2358		BAA_2358	2141192	2142502	+	aminotransferase%2C class III	identified by match to protein family HMM PF00202	gene	gene2323	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2358
BAA_2359	BAA_2359	atoD	atoD	2142499	2143197	+	acetate CoA-transferase%2C subunit A	identified by match to protein family HMM PF01144%3B match to protein family HMM TIGR02429	gene	gene2324	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2359
BAA_2360	BAA_2360		BAA_2360	2143182	2143844	+	CoA-transferase%2C beta subunit	identified by match to protein family HMM PF01144%3B match to protein family HMM TIGR02428	gene	gene2325	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2360
BAA_2361	BAA_2361		BAA_2361	2143860	2145128	+	peptidase%2C M20/M25/M40 family	identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01910	gene	gene2326	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2361
BAA_2362	BAA_2362		BAA_2362	2145125	2145970	+	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene2327	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2362
BAA_2363	BAA_2363	rocR2	rocR2	2146076	2147455	+	arginine utilization regulatory protein RocR	identified by match to protein family HMM PF00158%3B match to protein family HMM PF02954%3B match to protein family HMM PF07728%3B match to protein family HMM PF08448%3B match to protein family HMM TIGR00229	gene	gene2328	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2363
BAA_2364	BAA_2364	kamA	kamA	2147666	2149087	+	L-lysine 2%2C3-aminomutase	identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR00238	gene	gene2329	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2364
BAA_2365	BAA_2365		BAA_2365	2149084	2149356	+	conserved hypothetical protein		gene	gene2330	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2365
BAA_2366	BAA_2366		BAA_2366	2149429	2149644	+	conserved hypothetical protein	identified by match to protein family HMM PF06855	gene	gene2331	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2366
BAA_2367	BAA_2367		BAA_2367	2149834	2150496	+	conserved hypothetical protein		gene	gene2332	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2367
BAA_2368	BAA_2368		BAA_2368	2150501	2150668	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2333	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2368
BAA_2369	BAA_2369		BAA_2369	2150818	2150997	+	conserved hypothetical protein		gene	gene2334	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2369
BAA_2370	BAA_2370		BAA_2370	2151108	2151290	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2335	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2370
BAA_2371	BAA_2371		BAA_2371	2151290	2152111	+	protein kinase domain protein		gene	gene2336	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2371
BAA_2372	BAA_2372		BAA_2372	2152093	2152851	+	putative sporulation-control protein Spo0M	identified by match to protein family HMM PF07070	gene	gene2337	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2372
BAA_2373	BAA_2373		BAA_2373	2153554	2154444	-	cation efflux family protein	identified by match to protein family HMM PF01545%3B match to protein family HMM TIGR01297	gene	gene2339	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2373
BAA_2374	BAA_2374		BAA_2374	2152923	2153564	+	PAP2 family protein	identified by match to protein family HMM PF01569	gene	gene2338	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2374
BAA_2375	BAA_2375		BAA_2375	2154724	2155038	-	thioredoxin family protein	identified by match to protein family HMM PF00085	gene	gene2340	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2375
BAA_2376	BAA_2376		BAA_2376	2155118	2155480	-	conserved domain protein	identified by match to protein family HMM PF00589	gene	gene2341	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2376
BAA_2377	BAA_2377		BAA_2377	2155663	2156121	-	conserved hypothetical protein	identified by match to protein family HMM PF09346	gene	gene2342	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2377
BAA_2378	BAA_2378		BAA_2378	2156143	2157348	-	conserved domain protein	identified by match to protein family HMM PF06013	gene	gene2343	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2378
BAA_2379	BAA_2379		BAA_2379	2157530	2158681	-		putative S-layer protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00395	pseudogene	gene2344	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2379
BAA_2380	BAA_2380		BAA_2380	2158882	2160015	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2345	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2380
BAA_2381	BAA_2381		BAA_2381	2160047	2160511	-	Mrr restriction protein-related	identified by match to protein family HMM PF04471	gene	gene2346	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2381
BAA_2382	BAA_2382		BAA_2382	2160548	2160748	-	DNA-binding protein	identified by match to protein family HMM PF01381	gene	gene2347	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2382
BAA_2383	BAA_2383		BAA_2383	2160914	2161216	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2348	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2383
BAA_2384	BAA_2384		BAA_2384	2161514	2162704	+	FtsK/SpoIIIE family protein	identified by match to protein family HMM PF01580	gene	gene2349	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2384
BAA_2385	BAA_2385		BAA_2385	2162736	2163266	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2350	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2385
BAA_2386	BAA_2386		BAA_2386	2164381	2164989	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2351	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2386
BAA_2387	BAA_2387		BAA_2387	2165056	2165178	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2352	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2387
BAA_2388	BAA_2388		BAA_2388	2165402	2165800	-	conserved hypothetical protein	identified by match to protein family HMM PF01042	gene	gene2353	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2388
BAA_2389	BAA_2389		BAA_2389	2166592	2166888	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2354	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2389
BAA_2390	BAA_2390		BAA_2390	2167356	2168012	+	conserved domain protein		gene	gene2355	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2390
BAA_2391	BAA_2391		BAA_2391	2168405	2168677	+	conserved hypothetical protein		gene	gene2356	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2391
BAA_2392	BAA_2392		BAA_2392	2168798	2168935	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2357	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2392
BAA_2393	BAA_2393		BAA_2393	2169139	2169537	+	conserved hypothetical protein		gene	gene2358	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2393
BAA_2394	BAA_2394		BAA_2394	2169859	2170110	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2359	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2394
BAA_2395	BAA_2395		BAA_2395	2170230	2170766	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2360	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2395
BAA_2396	BAA_2396	prsA3	prsA3	2172294	2173145	+	peptidylprolyl isomerase PrsA3	identified by match to protein family HMM PF00639	gene	gene2361	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2396
BAA_2397	BAA_2397		BAA_2397	2173650	2173868	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2362	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2397
BAA_2398	BAA_2398		BAA_2398	2174053	2174460	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2363	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2398
BAA_2399	BAA_2399		BAA_2399	2174890	2175225	+	conserved domain protein	identified by match to protein family HMM PF08863	gene	gene2364	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2399
BAA_2400	BAA_2400	gerPF2	gerPF2	2175442	2175657	-	spore germination protein GerPF		gene	gene2365	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2400
BAA_2401	BAA_2401		BAA_2401	2175867	2176202	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2366	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2401
BAA_2402	BAA_2402		BAA_2402	2176498	2176710	+	conserved hypothetical protein	identified by match to protein family HMM PF01679	gene	gene2367	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2402
BAA_2403	BAA_2403		BAA_2403	2177455	2179917	+	penicillin-binding protein 1A	identified by match to protein family HMM PF00905%3B match to protein family HMM PF00912%3B match to protein family HMM TIGR02074	gene	gene2368	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2403
BAA_2404	BAA_2404		BAA_2404	2180532	2181677	+	major facilitator family transporter	identified by match to protein family HMM PF07690	gene	gene2369	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2404
BAA_2405	BAA_2405		BAA_2405	2181693	2181983	+	conserved hypothetical protein	identified by match to protein family HMM PF01521	gene	gene2370	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2405
BAA_2406	BAA_2406	mmgD	mmgD	2182383	2183504	+	citrate (Si)-synthase MmgD	identified by match to protein family HMM PF00285	gene	gene2371	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2406
BAA_2407	BAA_2407	mmgE	mmgE	2183603	2185039	+	mmgE protein	identified by match to protein family HMM PF03972%3B match to protein family HMM TIGR02330	gene	gene2372	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2407
BAA_2408	BAA_2408	prpB	prpB	2185058	2185966	+	methylisocitrate lyase	identified by match to protein family HMM TIGR02317	gene	gene2373	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2408
BAA_2409	BAA_2409		BAA_2409	2185976	2186092	-	conserved hypothetical protein		gene	gene2374	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2409
BAA_2410	BAA_2410		BAA_2410	2186121	2187830	+	acyl-CoA dehydrogenase	identified by match to protein family HMM PF00441%3B match to protein family HMM PF02770%3B match to protein family HMM PF02771%3B match to protein family HMM PF08028	gene	gene2375	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2410
BAA_2411	BAA_2411		BAA_2411	2187847	2188737	+	putative 2-hydroxy-3-oxopropionate reductase	identified by match to protein family HMM PF03446%3B match to protein family HMM PF03807	gene	gene2376	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2411
BAA_2412	BAA_2412	mmsA1	mmsA1	2188774	2190234	+	methylmalonic acid semialdehyde dehydrogenase	identified by match to protein family HMM PF00171%3B match to protein family HMM TIGR01722	gene	gene2377	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2412
BAA_2413	BAA_2413		BAA_2413	2190305	2190937	-	putative homoserine/threonine efflux protein	identified by match to protein family HMM PF01810	gene	gene2378	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2413
BAA_2414	BAA_2414		BAA_2414	2191121	2192176	-	enoyl-CoA hydratase/isomerase family protein	identified by match to protein family HMM PF00378	gene	gene2379	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2414
BAA_2415	BAA_2415		BAA_2415	2192493	2192750	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2380	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2415
BAA_2416	BAA_2416		BAA_2416	2192934	2193173	+	conserved hypothetical protein		gene	gene2381	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2416
BAA_2417	BAA_2417		BAA_2417	2193189	2194346	+	putative exonuclease SbcD	identified by match to protein family HMM PF00149%3B match to protein family HMM TIGR00619	gene	gene2382	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2417
BAA_2418	BAA_2418		BAA_2418	2194343	2197432	+	putative exonuclease	identified by match to protein family HMM PF02463	gene	gene2383	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2418
BAA_2419	BAA_2419		BAA_2419	2197801	2198001	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2385	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2419
BAA_2420	BAA_2420		BAA_2420	2197690	2197818	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2384	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2420
BAA_2421	BAA_2421		BAA_2421	2198401	2198565	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2386	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2421
BAA_2422	BAA_2422		BAA_2422	2198904	2199203	+	transcriptional regulator%2C ArsR family	identified by match to protein family HMM PF01022	gene	gene2387	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2422
BAA_2423	BAA_2423		BAA_2423	2199414	2199599	-	conserved hypothetical protein		gene	gene2388	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2423
BAA_2424	BAA_2424		BAA_2424	2200017	2200169	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2389	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2424
BAA_2425	BAA_2425		BAA_2425	2200166	2201368	+	putative oxalate:formate antiporter	identified by match to protein family HMM PF07690	gene	gene2390	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2425
BAA_2426	BAA_2426	bacA	bacA	2201952	2202728	+	2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase	identified by match to protein family HMM PF00106%3B match to protein family HMM PF01370%3B match to protein family HMM PF08659	gene	gene2391	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2426
BAA_2427	BAA_2427	bacC	bacC	2202755	2203954	+	isochorismate synthase DhbC	identified by match to protein family HMM PF00425%3B match to protein family HMM TIGR00543	gene	gene2392	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2427
BAA_2428	BAA_2428	bacE	bacE	2203967	2205583	+	(2%2C3-dihydroxybenzoyl)adenylate synthase	identified by match to protein family HMM PF00501%3B match to protein family HMM TIGR02275	gene	gene2393	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2428
BAA_2429	BAA_2429	bacB	bacB	2205615	2206502	+	isochorismatase	identified by match to protein family HMM PF00550%3B match to protein family HMM PF00857	gene	gene2394	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2429
BAA_2430	BAA_2430	bacF	bacF	2206534	2213691	+	nonribosomal peptide synthetase DhbF	identified by match to protein family HMM PF00501%3B match to protein family HMM PF00550%3B match to protein family HMM PF00668%3B match to protein family HMM PF00975%3B match to protein family HMM TIGR01733	gene	gene2395	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2430
BAA_2431	BAA_2431		BAA_2431	2213688	2213912	+	mbtH-like protein	identified by match to protein family HMM PF03621	gene	gene2396	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2431
BAA_2432	BAA_2432		BAA_2432	2213912	2215354	+	drug resistance transporter%2C EmrB/QacA family	identified by match to protein family HMM PF07690%3B match to protein family HMM TIGR00711	gene	gene2397	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2432
BAA_2433	BAA_2433		BAA_2433	2215388	2216137	+	putative 4'-phosphopantetheinyl transferase	identified by match to protein family HMM PF01648	gene	gene2398	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2433
BAA_2434	BAA_2434		BAA_2434	2216173	2216715	+	conserved hypothetical protein		gene	gene2399	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2434
BAA_2435	BAA_2435	hup2	hup2	2216753	2217025	-	DNA-binding protein HU	identified by match to protein family HMM PF00216	gene	gene2400	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2435
BAA_2436	BAA_2436		BAA_2436	2217230	2217997	+	conserved hypothetical protein		gene	gene2401	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2436
BAA_2437	BAA_2437		BAA_2437	2218012	2218536	+	DNA polymerase%2C DinB family	identified by match to protein family HMM PF05163	gene	gene2402	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2437
BAA_2438	BAA_2438		BAA_2438	2218625	2219818	-	alkaline serine protease%2C subtilase family	identified by match to protein family HMM PF00082	gene	gene2403	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2438
BAA_2439	BAA_2439		BAA_2439	2220045	2221412	-	sodium/alanine symporter family protein	identified by match to protein family HMM PF01235%3B match to protein family HMM TIGR00835	gene	gene2404	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2439
BAA_2441	BAA_2441		BAA_2441	2221857	2222432	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2405	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2441
BAA_2442	BAA_2442		BAA_2442	2222565	2222927	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2406	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2442
BAA_2443	BAA_2443		BAA_2443	2223132	2223752	+	conserved hypothetical protein		gene	gene2407	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2443
BAA_2444	BAA_2444		BAA_2444	2223938	2224645	+	RNA pseudouridine synthase family protein	identified by match to protein family HMM PF00849%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00093	gene	gene2408	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2444
BAA_2445	BAA_2445		BAA_2445	2224670	2224792	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2409	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2445
BAA_2446	BAA_2446	thrS1	thrS1	2225297	2227216	+	threonine--tRNA ligase	identified by match to protein family HMM PF00587%3B match to protein family HMM PF02824%3B match to protein family HMM PF03129%3B match to protein family HMM PF07973%3B match to protein family HMM TIGR00418	gene	gene2410	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2446
BAA_2447	BAA_2447		BAA_2447	2227470	2228018	+		ABC transporter%2C ATP-binding protein%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF00005	pseudogene	gene2411	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2447
BAA_2448	BAA_2448		BAA_2448	2228034	2228237	+		ABC transporter%2C ATP-binding protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene2412	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2448
BAA_2449	BAA_2449		BAA_2449	2228249	2230129	+	putative ABC transporter%2C permease protein	identified by match to protein family HMM PF02687	gene	gene2413	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2449
BAA_2450	BAA_2450		BAA_2450	2230399	2231430	+	hydrolase%2C alpha/beta fold family	identified by match to protein family HMM PF00561	gene	gene2414	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2450
BAA_2451	BAA_2451		BAA_2451	2231651	2232913	+	putative ABC transporter%2C permease protein	identified by match to protein family HMM PF07690	gene	gene2415	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2451
BAA_2452	BAA_2452		BAA_2452	2232968	2233192	+		ABC transporter%2C permease protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene2416	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2452
BAA_2453	BAA_2453		BAA_2453	2233211	2233834	+		oligopeptide transport system%2C permease component%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF00528	pseudogene	gene2417	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2453
BAA_2454	BAA_2454		BAA_2454	2233836	2234843	+	oligopeptide ABC transporter%2C permease component	identified by match to protein family HMM PF00528	gene	gene2418	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2454
BAA_2455	BAA_2455		BAA_2455	2234894	2235631	-	zinc transporter family protein	identified by match to protein family HMM PF02535	gene	gene2419	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2455
BAA_2456	BAA_2456		BAA_2456	2235767	2236555	+	conserved hypothetical protein	identified by match to protein family HMM PF08241%3B match to protein family HMM PF08242	gene	gene2420	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2456
BAA_2457	BAA_2457		BAA_2457	2236604	2237233	+	conserved hypothetical protein		gene	gene2421	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2457
BAA_2458	BAA_2458		BAA_2458	2237379	2237759	+	putative lipoprotein		gene	gene2422	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2458
BAA_2459	BAA_2459		BAA_2459	2237830	2238699	+	metallo-beta-lactamase family protein	identified by match to protein family HMM PF00753	gene	gene2423	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2459
BAA_2460	BAA_2460		BAA_2460	2238858	2239799	-	inosine-uridine preferring nucleoside hydrolase family protein	identified by match to protein family HMM PF01156	gene	gene2424	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2460
BAA_2461	BAA_2461		BAA_2461	2239833	2240435	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2425	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2461
BAA_2462	BAA_2462		BAA_2462	2240648	2241133	+	conserved hypothetical protein		gene	gene2426	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2462
BAA_2463	BAA_2463		BAA_2463	2242332	2242739	+	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene2427	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2463
BAA_2464	BAA_2464		BAA_2464	2242806	2243459	+	putative hydrolase	identified by match to protein family HMM PF00753	gene	gene2428	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2464
BAA_2465	BAA_2465		BAA_2465	2243557	2244180	-	transcriptional regulator%2C TetR family	identified by match to protein family HMM PF00440	gene	gene2429	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2465
BAA_2466	BAA_2466		BAA_2466	2244303	2246534	+	membrane protein%2C MmpL family	identified by match to protein family HMM PF03176	gene	gene2430	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2466
BAA_2467	BAA_2467		BAA_2467	2246582	2246764	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2431	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2467
BAA_2468	BAA_2468		BAA_2468	2246965	2247615	+	chloramphenicol acetyltransferase	identified by match to protein family HMM PF00302	gene	gene2432	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2468
BAA_2469	BAA_2469		BAA_2469	2247823	2248347	+	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene2433	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2469
BAA_2470	BAA_2470		BAA_2470	2248403	2249329	+	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583%3B match to protein family HMM PF00805	gene	gene2434	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2470
BAA_2471	BAA_2471		BAA_2471	2249477	2249989	+	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene2435	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2471
BAA_2472	BAA_2472		BAA_2472	2250027	2250911	-	putative membrane protein	identified by match to protein family HMM PF00892%3B match to protein family HMM PF08449	gene	gene2436	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2472
BAA_2473	BAA_2473		BAA_2473	2251082	2251642	+	DNA-binding protein	identified by match to protein family HMM PF01381%3B match to protein family HMM PF07883	gene	gene2437	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2473
BAA_2474	BAA_2474		BAA_2474	2251676	2252626	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2438	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2474
BAA_2475	BAA_2475		BAA_2475	2252784	2252933	+	Spo0E like sporulation regulatory protein	identified by match to protein family HMM PF09388	gene	gene2439	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2475
BAA_2476	BAA_2476		BAA_2476	2253048	2253776	+	hydrolase%2C alpha/beta fold family	identified by match to protein family HMM PF00561	gene	gene2440	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2476
BAA_2477	BAA_2477	hemY2	hemY2	2253837	2255237	+	protoporphyrinogen oxidase	identified by match to protein family HMM PF01593%3B match to protein family HMM TIGR00562	gene	gene2441	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2477
BAA_2478	BAA_2478		BAA_2478	2255290	2255838	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2442	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2478
BAA_2479	BAA_2479		BAA_2479	2256137	2256688	+	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene2443	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2479
BAA_2480	BAA_2480		BAA_2480	2256728	2256913	-	conserved hypothetical protein		gene	gene2444	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2480
BAA_2481	BAA_2481	cspA2	cspA2	2257000	2257203	-	cold shock protein CspA	identified by match to protein family HMM PF00313	gene	gene2445	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2481
BAA_2482	BAA_2482		BAA_2482	2257575	2258075	+		CAAX amino terminal protease family protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2446	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2482
BAA_2483	BAA_2483		BAA_2483	2257771	2258472	+		caax amino protease family protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02517	pseudogene	gene2447	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2483
BAA_2484	BAA_2484		BAA_2484	2258436	2259131	+	conserved hypothetical protein		gene	gene2448	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2484
BAA_2485	BAA_2485		BAA_2485	2259165	2259947	-	conserved domain protein		gene	gene2449	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2485
BAA_2486	BAA_2486		BAA_2486	2260265	2261038	+	hydrolase%2C haloacid dehalogenase-like family	identified by match to protein family HMM PF00702%3B match to protein family HMM PF05116%3B match to protein family HMM PF08282%3B match to protein family HMM TIGR00099%3B match to protein family HMM TIGR01484	gene	gene2450	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2486
BAA_2487	BAA_2487		BAA_2487	2261136	2261741	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2451	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2487
BAA_2488	BAA_2488		BAA_2488	2262647	2262895	-		conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene2452	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2488
BAA_2489	BAA_2489		BAA_2489	2263303	2263587	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2453	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2489
BAA_2490	BAA_2490		BAA_2490	2263783	2263947	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2454	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2490
BAA_2491	BAA_2491		BAA_2491	2264056	2264193	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2455	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2491
BAA_2492	BAA_2492		BAA_2492	2264788	2265099	-		hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by glimmer%3B putative	pseudogene	gene2456	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2492
BAA_2493	BAA_2493		BAA_2493	2265522	2266394	-	transcriptional regulator%2C LysR family	identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466	gene	gene2457	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2493
BAA_2494	BAA_2494	asd1	asd1	2266524	2267567	+	aspartate-semialdehyde dehydrogenase	identified by match to protein family HMM PF01118%3B match to protein family HMM PF02774%3B match to protein family HMM TIGR01296	gene	gene2458	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2494
BAA_2495	BAA_2495		BAA_2495	2267733	2268857	+	conserved domain protein	identified by match to protein family HMM PF03417	gene	gene2459	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2495
BAA_2496	BAA_2496		BAA_2496	2268911	2269174	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2460	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2496
BAA_2497	BAA_2497		BAA_2497	2269267	2270169	-	transcriptional regulator%2C LysR family	identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466	gene	gene2461	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2497
BAA_2498	BAA_2498		BAA_2498	2270322	2271008	+	conserved hypothetical protein	identified by match to protein family HMM PF03473%3B match to protein family HMM PF03475	gene	gene2462	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2498
BAA_2499	BAA_2499		BAA_2499	2271269	2272153	+	conserved hypothetical protein	identified by match to protein family HMM PF00583	gene	gene2463	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2499
BAA_2500	BAA_2500		BAA_2500	2272187	2272783	+	conserved hypothetical protein	identified by match to protein family HMM PF07081	gene	gene2464	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2500
BAA_2501	BAA_2501		BAA_2501	2273005	2274759	+	ABC transporter%2C permease/ATP-binding protein	identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664	gene	gene2465	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2501
BAA_2502	BAA_2502		BAA_2502	2274752	2276548	+	ABC transporter%2C permease/ATP-binding protein	identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664	gene	gene2466	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2502
BAA_2503	BAA_2503		BAA_2503	2277152	2277889	+	N-acetylmuramoyl-L-alanine amidase%2C family 3	identified by match to protein family HMM PF01520	gene	gene2467	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2503
BAA_2504	BAA_2504		BAA_2504	2277987	2278571	-	transporter%2C LysE family	identified by match to protein family HMM PF01810	gene	gene2468	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2504
BAA_2505	BAA_2505		BAA_2505	2278686	2279243	+	DNA-binding protein	identified by match to protein family HMM PF01381%3B match to protein family HMM PF07883	gene	gene2469	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2505
BAA_2506	BAA_2506		BAA_2506	2279648	2280202	-		hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by glimmer%3B putative	pseudogene	gene2470	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2506
BAA_2507	BAA_2507		BAA_2507	2280436	2281536	+	conserved hypothetical protein	identified by match to protein family HMM PF01391	gene	gene2471	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2507
BAA_2508	BAA_2508		BAA_2508	2282098	2282322	-	conserved domain protein		gene	gene2472	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2508
BAA_2509	BAA_2509		BAA_2509	2282959	2283264	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2473	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2509
BAA_2510	BAA_2510		BAA_2510	2283359	2284669	+	conserved hypothetical protein	identified by match to protein family HMM PF01266%3B match to protein family HMM PF01593	gene	gene2474	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2510
BAA_2511	BAA_2511		BAA_2511	2284647	2285516	+	RNA polymerase sigma-70 factor%2C ECF subfamily	identified by match to protein family HMM PF04542%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937%3B match to protein family HMM TIGR02957	gene	gene2475	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2511
BAA_2512	BAA_2512		BAA_2512	2285556	2285714	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2476	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2512
BAA_2513	BAA_2513		BAA_2513	2285907	2286029	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2477	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2513
BAA_2514	BAA_2514		BAA_2514	2286028	2286612	+	O-methyltransferase family protein	identified by match to protein family HMM PF01596	gene	gene2478	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2514
BAA_2515	BAA_2515		BAA_2515	2286926	2288038	+	conserved hypothetical protein	identified by match to protein family HMM PF05816	gene	gene2479	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2515
BAA_2516	BAA_2516		BAA_2516	2288063	2288896	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2480	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2516
BAA_2517	BAA_2517		BAA_2517	2288950	2290272	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02638	pseudogene	gene2481	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2517
BAA_2518	BAA_2518		BAA_2518	2290452	2290592	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2482	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2518
BAA_2519	BAA_2519		BAA_2519	2290738	2291043	+	putative PTS system%2C cellobiose-specific IIB component	identified by match to protein family HMM PF02302	gene	gene2483	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2519
BAA_2520	BAA_2520		BAA_2520	2291055	2292341	+	putative PTS system%2C cellobiose-specific IIC component	identified by match to protein family HMM PF02378%3B match to protein family HMM TIGR00410	gene	gene2484	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2520
BAA_2521	BAA_2521		BAA_2521	2292421	2292687	+	conserved hypothetical protein		gene	gene2485	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2521
BAA_2522	BAA_2522		BAA_2522	2292710	2293858	+	conserved hypothetical protein	identified by match to protein family HMM PF03702	gene	gene2486	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2522
BAA_2523	BAA_2523		BAA_2523	2293879	2294790	+	conserved hypothetical protein	identified by match to protein family HMM PF01869	gene	gene2487	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2523
BAA_2524	BAA_2524		BAA_2524	2294902	2295471	+	putative membrane protein	identified by match to protein family HMM PF02660	gene	gene2488	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2524
BAA_2525	BAA_2525		BAA_2525	2295542	2297125	+	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00266	gene	gene2489	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2525
BAA_2526	BAA_2526	tdcB	tdcB	2297212	2298213	+	threonine ammonia-lyase%2C catabolic	identified by match to protein family HMM PF00291%3B match to protein family HMM TIGR01127	gene	gene2490	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2526
BAA_2527	BAA_2527		BAA_2527	2299321	2299479	-	conserved hypothetical protein		gene	gene2491	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2527
BAA_2528	BAA_2528		BAA_2528	2299458	2300243	+	metallo-beta-lactamase family protein	identified by match to protein family HMM PF00753	gene	gene2492	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2528
BAA_2529	BAA_2529		BAA_2529	2300287	2300976	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2493	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2529
BAA_2530	BAA_2530		BAA_2530	2301108	2301377	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2494	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2530
BAA_2531	BAA_2531		BAA_2531	2301460	2302803	+	ATP-dependent RNA helicase%2C DEAD/DEAH box family	identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271	gene	gene2495	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2531
BAA_2532	BAA_2532		BAA_2532	2302985	2303245	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2496	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2532
BAA_2533	BAA_2533		BAA_2533	2304116	2304619	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2497	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2533
BAA_2534	BAA_2534		BAA_2534	2305151	2305279	+	conserved hypothetical protein		gene	gene2498	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2534
BAA_2535	BAA_2535		BAA_2535	2305389	2306024	+	transcriptional regulator%2C TetR family	identified by match to protein family HMM PF00440	gene	gene2499	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2535
BAA_2536	BAA_2536		BAA_2536	2306087	2307334	+	putative ABC transporter%2C permease protein	identified by match to protein family HMM PF07690	gene	gene2500	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2536
BAA_2537	BAA_2537		BAA_2537	2307473	2309680	+	ABC transporter%2C permease protein	identified by match to protein family HMM PF02687	gene	gene2501	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2537
BAA_2538	BAA_2538		BAA_2538	2309692	2310453	+	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene2502	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2538
BAA_2539	BAA_2539		BAA_2539	2310552	2311262	+	conserved hypothetical protein	identified by match to protein family HMM PF03848%3B match to protein family HMM PF05724%3B match to protein family HMM PF08241%3B match to protein family HMM PF08242	gene	gene2503	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2539
BAA_2540	BAA_2540		BAA_2540	2311383	2311790	+	conserved hypothetical protein	identified by match to protein family HMM PF00903%3B match to protein family HMM PF06983	gene	gene2504	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2540
BAA_2541	BAA_2541		BAA_2541	2312134	2312916	+	conserved hypothetical protein	identified by match to protein family HMM PF08241	gene	gene2505	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2541
BAA_2542	BAA_2542		BAA_2542	2313038	2314714	-	putative indolepyruvate decarboxylase	identified by match to protein family HMM PF00205%3B match to protein family HMM PF02775%3B match to protein family HMM PF02776	gene	gene2506	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2542
BAA_2543	BAA_2543		BAA_2543	2314830	2315312	+	transcriptional regulator%2C MarR family	identified by match to protein family HMM PF01047	gene	gene2507	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2543
BAA_2544	BAA_2544	gpm	gpm	2315480	2316217	+	phosphoglycerate mutase	identified by match to protein family HMM PF00300%3B match to protein family HMM TIGR01258	gene	gene2508	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2544
BAA_2545	BAA_2545		BAA_2545	2316287	2316403	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2509	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2545
BAA_2546	BAA_2546		BAA_2546	2316406	2317143	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2510	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2546
BAA_2547	BAA_2547		BAA_2547	2317256	2317381	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2511	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2547
BAA_2548	BAA_2548		BAA_2548	2317458	2317634	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2512	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2548
BAA_2549	BAA_2549		BAA_2549	2317671	2317856	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2513	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2549
BAA_2550	BAA_2550		BAA_2550	2318229	2318465	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2514	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2550
BAA_2551	BAA_2551		BAA_2551	2318602	2318727	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2515	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2551
BAA_2552	BAA_2552		BAA_2552	2318804	2318980	+	conserved domain protein		gene	gene2516	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2552
BAA_2553	BAA_2553	pepD	pepD	2319124	2320593	+	aminoacyl-histidine dipeptidase	identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01893	gene	gene2517	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2553
BAA_2554	BAA_2554		BAA_2554	2320664	2320828	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2518	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2554
BAA_2555	BAA_2555		BAA_2555	2321157	2321627	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2519	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2555
BAA_2556	BAA_2556		BAA_2556	2321831	2322424	+	putative lipase/acylhydrolase	identified by match to protein family HMM PF00657	gene	gene2520	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2556
BAA_2557	BAA_2557		BAA_2557	2322646	2323179	+	RNA polymerase sigma-70 factor%2C ECF subfamily	identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937	gene	gene2521	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2557
BAA_2558	BAA_2558		BAA_2558	2323169	2323996	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2522	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2558
BAA_2559	BAA_2559		BAA_2559	2324008	2325774	-	penicillin-binding protein	identified by match to protein family HMM PF00905%3B match to protein family HMM PF03717	gene	gene2523	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2559
BAA_2560	BAA_2560		BAA_2560	2325934	2326062	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2524	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2560
BAA_2561	BAA_2561		BAA_2561	2326139	2326528	+		penicillin-binding protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2525	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2561
BAA_2562	BAA_2562		BAA_2562	2326519	2328270	+		penicillin-binding Protein dimerisation domain family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00905%3B match to protein family HMM PF03717	pseudogene	gene2526	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2562
BAA_2563	BAA_2563	bla1	bla1	2328597	2329427	+	beta-lactamase Bla1	identified by match to protein family HMM PF00144	gene	gene2527	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2563
BAA_2564	BAA_2564		BAA_2564	2329435	2330031	-	PAP2 family protein	identified by match to protein family HMM PF01569	gene	gene2528	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2564
BAA_2565	BAA_2565		BAA_2565	2330240	2331241	+	transcriptional regulator/sugar-binding domain%2C LacI family	identified by match to protein family HMM PF00356%3B match to protein family HMM PF00532	gene	gene2529	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2565
BAA_2566	BAA_2566	csbX	csbX	2331330	2332610	-	alpha-ketoglutarate permease	identified by match to protein family HMM PF07690	gene	gene2530	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2566
BAA_2567	BAA_2567		BAA_2567	2333103	2334128	+	oxidoreductase%2C NAD-binding	identified by match to protein family HMM PF01408%3B match to protein family HMM PF02894	gene	gene2531	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2567
BAA_2568	BAA_2568		BAA_2568	2334228	2335226	+	putative iolC protein	identified by match to protein family HMM PF00294	gene	gene2532	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2568
BAA_2569	BAA_2569	mmsA2	mmsA2	2335265	2336767	+	methylmalonic acid semialdehyde dehydrogenase	identified by match to protein family HMM PF00171%3B match to protein family HMM TIGR01722	gene	gene2533	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2569
BAA_2570	BAA_2570		BAA_2570	2336718	2336894	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2534	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2570
BAA_2571	BAA_2571		BAA_2571	2336923	2338857	+	putative iolD protein	identified by match to protein family HMM PF00205%3B match to protein family HMM PF02775%3B match to protein family HMM PF02776	gene	gene2535	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2571
BAA_2572	BAA_2572		BAA_2572	2338980	2339213	+		putative IolE protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2536	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2572
BAA_2573	BAA_2573		BAA_2573	2339177	2339875	+		inosose dehydratase (2-keto-myo-inositol dehydratase)%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01261	pseudogene	gene2537	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2573
BAA_2574	BAA_2574	fba1	fba1	2340004	2340849	+	fructose-bisphosphate aldolase%2C class II	identified by match to protein family HMM PF01116%3B match to protein family HMM TIGR00167	gene	gene2538	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2574
BAA_2575	BAA_2575		BAA_2575	2340955	2341746	+	putative iolB protein	identified by match to protein family HMM PF06845	gene	gene2539	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2575
BAA_2576	BAA_2576		BAA_2576	2341939	2342145	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2540	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2576
BAA_2577	BAA_2577		BAA_2577	2342437	2342640	+		conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene2541	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2577
BAA_2578	BAA_2578		BAA_2578	2342692	2342952	+		conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene2542	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2578
BAA_2579	BAA_2579		BAA_2579	2343259	2344053	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00149	pseudogene	gene2543	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2579
BAA_2580	BAA_2580		BAA_2580	2344137	2345210	+		2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02872	pseudogene	gene2544	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2580
BAA_2581	BAA_2581		BAA_2581	2345484	2345642	-	putative lipoprotein		gene	gene2545	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2581
BAA_2582	BAA_2582		BAA_2582	2345642	2346742	-	conserved hypothetical protein		gene	gene2546	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2582
BAA_2583	BAA_2583		BAA_2583	2347282	2347482	+	DNA-binding protein	identified by match to protein family HMM PF01381	gene	gene2547	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2583
BAA_2584	BAA_2584		BAA_2584	2348292	2348492	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2548	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2584
BAA_2585	BAA_2585		BAA_2585	2348804	2349535	+	D-alanyl-D-alanine carboxypeptidase family protein	identified by match to protein family HMM PF02557	gene	gene2549	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2585
BAA_2586	BAA_2586		BAA_2586	2349772	2350176	-		putative lipoprotein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2550	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2586
BAA_2587	BAA_2587		BAA_2587	2351079	2352311	+	N-acetylmuramoyl-L-alanine amidase%2C family 3	identified by match to protein family HMM PF00395%3B match to protein family HMM PF01520	gene	gene2551	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2587
BAA_2588	BAA_2588		BAA_2588	2352616	2352879	+		hemolysin II%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2552	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2588
BAA_2589	BAA_2589		BAA_2589	2353008	2353730	+		hemolysin II%2C C-%3B this region contains one or more premature stops and/or frameshifts%3B identified by match to protein family HMM PF07968	pseudogene	gene2553	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2589
BAA_2590	BAA_2590		BAA_2590	2354261	2354866	+	transcriptional regulator%2C TetR family	identified by match to protein family HMM PF00440	gene	gene2554	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2590
BAA_2591	BAA_2591		BAA_2591	2355008	2356486	-	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene2555	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2591
BAA_2592	BAA_2592		BAA_2592	2356880	2357086	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2556	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2592
BAA_2593	BAA_2593		BAA_2593	2357741	2360227	+	sensory box/GGDEF family protein	identified by match to protein family HMM PF00563%3B match to protein family HMM PF00989%3B match to protein family HMM PF00990%3B match to protein family HMM PF08448%3B match to protein family HMM TIGR00229%3B match to protein family HMM TIGR00254	gene	gene2557	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2593
BAA_2594	BAA_2594		BAA_2594	2360672	2361178	+	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene2558	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2594
BAA_2595	BAA_2595		BAA_2595	2361323	2361484	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2559	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2595
BAA_2596	BAA_2596		BAA_2596	2361750	2362157	-	putative spore coat protein	identified by match to protein family HMM PF09346	gene	gene2560	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2596
BAA_2597	BAA_2597		BAA_2597	2362442	2363641	+	conserved hypothetical protein	identified by match to protein family HMM PF07992	gene	gene2561	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2597
BAA_2598	BAA_2598		BAA_2598	2363708	2365162	+	metallo-beta-lactamase/rhodanese-like domain protein	identified by match to protein family HMM PF00581%3B match to protein family HMM PF00753	gene	gene2562	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2598
BAA_2599	BAA_2599		BAA_2599	2365273	2365491	+	conserved domain protein		gene	gene2563	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2599
BAA_2600	BAA_2600		BAA_2600	2365701	2365952	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2564	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2600
BAA_2601	BAA_2601		BAA_2601	2366197	2366865	+	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene2565	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2601
BAA_2602	BAA_2602		BAA_2602	2366862	2367881	+	putative ABC transporter%2C permease protein	identified by match to protein family HMM PF01061	gene	gene2566	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2602
BAA_2603	BAA_2603		BAA_2603	2367906	2368559	+	transcriptional regulator%2C TetR family	identified by match to protein family HMM PF00440	gene	gene2567	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2603
BAA_2604	BAA_2604		BAA_2604	2368681	2368980	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2568	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2604
BAA_2605	BAA_2605		BAA_2605	2369213	2370181	+	conserved hypothetical protein	identified by match to protein family HMM PF04463%3B match to protein family HMM PF08349	gene	gene2569	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2605
BAA_2606	BAA_2606		BAA_2606	2370398	2371543	+	acyl-CoA dehydrogenase	identified by match to protein family HMM PF00441%3B match to protein family HMM PF02770%3B match to protein family HMM PF02771%3B match to protein family HMM PF08028	gene	gene2570	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2606
BAA_2607	BAA_2607		BAA_2607	2371559	2372896	+	putative acetyl-CoA carboxylase%2C biotin carboxylase	identified by match to protein family HMM PF00289%3B match to protein family HMM PF02222%3B match to protein family HMM PF02785%3B match to protein family HMM PF02786%3B match to protein family HMM PF08443	gene	gene2571	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2607
BAA_2608	BAA_2608		BAA_2608	2372923	2373138	+	conserved hypothetical protein	identified by match to protein family HMM PF00364	gene	gene2572	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2608
BAA_2609	BAA_2609	mvaB	mvaB	2373160	2374071	+	hydroxymethylglutaryl-CoA lyase	identified by match to protein family HMM PF00682	gene	gene2573	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2609
BAA_2610	BAA_2610		BAA_2610	2374076	2374864	+	enoyl-CoA hydratase/isomerase family protein	identified by match to protein family HMM PF00378	gene	gene2574	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2610
BAA_2611	BAA_2611		BAA_2611	2374867	2376408	+	carboxyl transferase domain protein	identified by match to protein family HMM PF01039	gene	gene2575	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2611
BAA_2612	BAA_2612		BAA_2612	2376458	2378398	+	putative acetoacetyl-CoA synthase	identified by match to protein family HMM PF00501	gene	gene2576	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2612
BAA_2613	BAA_2613		BAA_2613	2378751	2378897	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2577	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2613
BAA_2614	BAA_2614		BAA_2614	2379018	2379560	+	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene2578	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2614
BAA_2615	BAA_2615		BAA_2615	2379609	2380169	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2579	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2615
BAA_2616	BAA_2616		BAA_2616	2380162	2380902	+	conserved hypothetical protein		gene	gene2580	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2616
BAA_2617	BAA_2617		BAA_2617	2380905	2381363	+	conserved hypothetical protein	identified by match to protein family HMM PF05163	gene	gene2581	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2617
BAA_2618	BAA_2618		BAA_2618	2381422	2382438	-	D-alanyl-D-alanine carboxypeptidase family protein	identified by match to protein family HMM PF00768	gene	gene2582	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2618
BAA_2619	BAA_2619		BAA_2619	2382620	2383777	-	sensor histidine kinase	identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518	gene	gene2583	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2619
BAA_2620	BAA_2620		BAA_2620	2383767	2384462	-	DNA-binding response regulator	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486	gene	gene2584	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2620
BAA_2621	BAA_2621		BAA_2621	2384654	2385262	+	conserved hypothetical protein TIGR00488	identified by match to protein family HMM PF01966%3B match to protein family HMM TIGR00488	gene	gene2585	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2621
BAA_2622	BAA_2622		BAA_2622	2385531	2385836	+		conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2586	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2622
BAA_2623	BAA_2623		BAA_2623	2385833	2386570	+	phosphorylase family protein	identified by match to protein family HMM PF01048	gene	gene2587	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2623
BAA_2624	BAA_2624		BAA_2624	2386587	2387222	+	conserved hypothetical protein		gene	gene2588	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2624
BAA_2625	BAA_2625		BAA_2625	2387316	2388164	+	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene2589	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2625
BAA_2626	BAA_2626		BAA_2626	2388272	2388646	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2590	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2626
BAA_2627	BAA_2627		BAA_2627	2388816	2389892	+		neutral protease%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01447%3B match to protein family HMM PF03413%3B match to protein family HMM PF07504	pseudogene	gene2591	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2627
BAA_2628	BAA_2628		BAA_2628	2389963	2391387	+		thermolysin metallopeptidase%2C alpha-helical domain%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02868%3B match to protein family HMM PF07523	pseudogene	gene2592	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2628
BAA_2629	BAA_2629		BAA_2629	2391742	2392302	+	conserved hypothetical protein		gene	gene2593	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2629
BAA_2630	BAA_2630		BAA_2630	2392439	2393176	+	conserved hypothetical protein		gene	gene2594	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2630
BAA_2631	BAA_2631		BAA_2631	2393264	2393743	+	conserved hypothetical protein	identified by match to protein family HMM PF08327	gene	gene2595	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2631
BAA_2632	BAA_2632		BAA_2632	2393823	2396990	+	excinuclease ABC%2C A subunit-related protein	identified by match to protein family HMM PF00005	gene	gene2596	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2632
BAA_2633	BAA_2633		BAA_2633	2397372	2397713	+	conserved hypothetical protein	identified by match to protein family HMM PF03551	gene	gene2597	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2633
BAA_2634	BAA_2634		BAA_2634	2397710	2398240	+	conserved domain protein		gene	gene2598	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2634
BAA_2635	BAA_2635		BAA_2635	2398275	2399666	+	putative penicillin-binding protein	identified by match to protein family HMM PF00144	gene	gene2599	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2635
BAA_2636	BAA_2636		BAA_2636	2399788	2400597	+	transcriptional regulator%2C MerR family	identified by match to protein family HMM PF00376%3B match to protein family HMM PF06445	gene	gene2600	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2636
BAA_2637	BAA_2637		BAA_2637	2400694	2401920	-	putative permease	identified by match to protein family HMM PF07690	gene	gene2601	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2637
BAA_2638	BAA_2638		BAA_2638	2402142	2402717	+	MutT/NUDIX family protein	identified by match to protein family HMM PF00293	gene	gene2602	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2638
BAA_2639	BAA_2639		BAA_2639	2402899	2403693	+	conserved domain protein		gene	gene2603	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2639
BAA_2640	BAA_2640		BAA_2640	2403743	2403886	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2604	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2640
BAA_2641	BAA_2641		BAA_2641	2403969	2404916	-	conserved hypothetical protein	identified by match to protein family HMM PF01636	gene	gene2605	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2641
BAA_2642	BAA_2642		BAA_2642	2405246	2406340	+	transcriptional regulator%2C AraC family	identified by match to protein family HMM PF00165	gene	gene2606	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2642
BAA_2643	BAA_2643		BAA_2643	2406355	2408046	-	conserved hypothetical protein	identified by match to protein family HMM PF01432%3B match to protein family HMM TIGR02289	gene	gene2607	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2643
BAA_2644	BAA_2644		BAA_2644	2408216	2408809	+	putative lipoprotein		gene	gene2608	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2644
BAA_2645	BAA_2645		BAA_2645	2408880	2410250	+	conserved hypothetical protein	identified by match to protein family HMM PF00155%3B match to protein family HMM PF00392	gene	gene2609	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2645
BAA_2646	BAA_2646		BAA_2646	2410387	2410590	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2610	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2646
BAA_2647	BAA_2647		BAA_2647	2410655	2410783	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2611	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2647
BAA_2648	BAA_2648		BAA_2648	2410973	2411899	+	oxidoreductase%2C zinc-binding dehydrogenase family	identified by match to protein family HMM PF00107%3B match to protein family HMM PF08240	gene	gene2612	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2648
BAA_2649	BAA_2649		BAA_2649	2412118	2412285	+		hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by glimmer%3B putative	pseudogene	gene2613	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2649
BAA_2650	BAA_2650		BAA_2650	2412661	2413290	+	conserved domain protein	identified by match to protein family HMM PF08241%3B match to protein family HMM PF08242	gene	gene2614	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2650
BAA_2651	BAA_2651		BAA_2651	2413564	2414769	+		UDP-N-acetylmuramoylalanyl-D-glutamyl-2%2C6-diaminopimelate ligase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01225%3B match to protein family HMM PF02875%3B match to protein family HMM PF08245%3B match to protein family HMM TIGR01085	pseudogene	gene2615	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2651
BAA_2652	BAA_2652		BAA_2652	2414744	2415043	+		UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase)(Meso-diaminopimelate-adding enzyme) (Meso-A2pm-adding enzyme) (UDP-N-acetylmuramyl-tripeptide synthetase) (UDP-MurNAc-tripeptidesynt%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2616	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2652
BAA_2653	BAA_2653		BAA_2653	2415188	2415889	-	conserved hypothetical protein	identified by match to protein family HMM PF03848%3B match to protein family HMM PF08241%3B match to protein family HMM PF08242	gene	gene2617	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2653
BAA_2654	BAA_2654		BAA_2654	2416102	2416230	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2618	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2654
BAA_2655	BAA_2655	cwlJ1	cwlJ1	2416376	2416804	-	cell wall hydrolase	identified by match to protein family HMM PF07486	gene	gene2619	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2655
BAA_2656	BAA_2656		BAA_2656	2416950	2417864	+	acetamidase/formamidase family protein	identified by match to protein family HMM PF03069	gene	gene2620	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2656
BAA_2657	BAA_2657		BAA_2657	2417990	2418697	+	DNA-binding response regulator	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486	gene	gene2621	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2657
BAA_2658	BAA_2658		BAA_2658	2418694	2419023	+		sensor histidine kinase%2C N-%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2622	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2658
BAA_2659	BAA_2659		BAA_2659	2418917	2419675	+		sensor histidine kinase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02518	pseudogene	gene2623	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2659
BAA_2660	BAA_2660		BAA_2660	2419978	2420604	-	putative membrane protein		gene	gene2624	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2660
BAA_2661	BAA_2661		BAA_2661	2421130	2421783	+		nucleotide-binding protein ExpZ%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00005	pseudogene	gene2625	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2661
BAA_2662	BAA_2662		BAA_2662	2421894	2422775	+		ABC transporter%2C ATP-binding protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00005	pseudogene	gene2626	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2662
BAA_2663	BAA_2663		BAA_2663	2422800	2423378	+	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene2627	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2663
BAA_2664	BAA_2664		BAA_2664	2423763	2424299	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2628	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2664
BAA_2665	BAA_2665		BAA_2665	2424613	2425383	+	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene2629	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2665
BAA_2666	BAA_2666		BAA_2666	2425358	2426644	+		efflux ABC transporter%2C permease protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02687	pseudogene	gene2630	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2666
BAA_2667	BAA_2667		BAA_2667	2426641	2427288	+		ABC transporter%2C permease%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2631	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2667
BAA_2668	BAA_2668		BAA_2668	2427356	2428024	+	putative lipoprotein		gene	gene2632	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2668
BAA_2669	BAA_2669		BAA_2669	2428101	2428427	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2633	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2669
BAA_2670	BAA_2670		BAA_2670	2428735	2429922	+		putative lipase%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene2634	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2670
BAA_2671	BAA_2671		BAA_2671	2430010	2431053	+	putative homoserine dehydrogenase	identified by match to protein family HMM PF00742%3B match to protein family HMM PF03447	gene	gene2635	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2671
BAA_2672	BAA_2672		BAA_2672	2431175	2432623	+	transcriptional regulator%2C GntR family	identified by match to protein family HMM PF00155%3B match to protein family HMM PF00392	gene	gene2636	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2672
BAA_2673	BAA_2673	ddlB	ddlB	2432628	2433542	+	D-alanine--D-alanine ligase	identified by match to protein family HMM PF01071%3B match to protein family HMM PF01820%3B match to protein family HMM PF02655%3B match to protein family HMM PF07478%3B match to protein family HMM PF08443%3B match to protein family HMM TIGR01205	gene	gene2637	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2673
BAA_2675	BAA_2675	tenA	tenA	2433817	2434533	+	transcriptional activator TenA	identified by match to protein family HMM PF03070	gene	gene2638	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2675
BAA_2676	BAA_2676		BAA_2676	2434727	2435188	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2639	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2676
BAA_2677	BAA_2677		BAA_2677	2435149	2435379	+	group-specific protein		gene	gene2640	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2677
BAA_2678	BAA_2678		BAA_2678	2435757	2435921	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2641	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2678
BAA_2679	BAA_2679		BAA_2679	2436005	2436217	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2642	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2679
BAA_2680	BAA_2680		BAA_2680	2436390	2436596	-	conserved domain protein		gene	gene2643	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2680
BAA_2681	BAA_2681		BAA_2681	2436761	2436886	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2644	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2681
BAA_2682	BAA_2682		BAA_2682	2437241	2437705	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2645	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2682
BAA_2683	BAA_2683		BAA_2683	2437814	2437948	-	transposase		gene	gene2646	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2683
BAA_2684	BAA_2684		BAA_2684	2438286	2440673	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2647	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2684
BAA_2685	BAA_2685		BAA_2685	2440751	2440885	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2648	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2685
BAA_2686	BAA_2686		BAA_2686	2440882	2441436	+		group-specific protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2649	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2686
BAA_2687	BAA_2687		BAA_2687	2441468	2441656	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2650	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2687
BAA_2688	BAA_2688		BAA_2688	2441783	2442199	+	conserved hypothetical protein		gene	gene2651	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2688
BAA_2689	BAA_2689		BAA_2689	2442340	2442543	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2652	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2689
BAA_2690	BAA_2690		BAA_2690	2442841	2443053	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2653	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2690
BAA_2691	BAA_2691		BAA_2691	2443348	2444352	+	conserved hypothetical protein	identified by match to protein family HMM PF08874	gene	gene2654	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2691
BAA_2692	BAA_2692		BAA_2692	2444499	2444903	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2655	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2692
BAA_2693	BAA_2693	cypA	cypA	2445063	2446298	+	unspecific monooxygenase	identified by match to protein family HMM PF00067	gene	gene2656	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2693
BAA_2694	BAA_2694		BAA_2694	2446567	2447850	+	putative permease	identified by match to protein family HMM PF07690	gene	gene2657	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2694
BAA_2695	BAA_2695		BAA_2695	2447840	2448472	+	acetyltransferase%2C CYSE/LACA/LPXA/NODL family	identified by match to protein family HMM PF00132	gene	gene2658	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2695
BAA_2696	BAA_2696		BAA_2696	2448543	2448698	+	conserved hypothetical protein	identified by match to protein family HMM PF07561	gene	gene2659	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2696
BAA_2697	BAA_2697		BAA_2697	2448800	2449297	-	conserved hypothetical protein	identified by match to protein family HMM PF03551	gene	gene2660	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2697
BAA_2698	BAA_2698		BAA_2698	2449438	2450652	+	cytochrome P450 family protein	identified by match to protein family HMM PF00067	gene	gene2661	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2698
BAA_2699	BAA_2699		BAA_2699	2450766	2451344	+	conserved hypothetical protein	identified by match to protein family HMM PF05995	gene	gene2662	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2699
BAA_2700	BAA_2700		BAA_2700	2451522	2452373	+	hydrolase%2C haloacid dehalogenase-like family	identified by match to protein family HMM PF00702%3B match to protein family HMM PF05116%3B match to protein family HMM PF08282%3B match to protein family HMM TIGR00099%3B match to protein family HMM TIGR01484	gene	gene2663	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2700
BAA_2701	BAA_2701		BAA_2701	2452850	2453047	+		hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by glimmer%3B putative	pseudogene	gene2664	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2701
BAA_2702	BAA_2702		BAA_2702	2453107	2454636	+		sensor histidine kinase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00512%3B match to protein family HMM PF00989%3B match to protein family HMM PF02518%3B match to protein family HMM PF08447%3B match to protein family HMM PF08448%3B match to protein family HMM TIGR00229	pseudogene	gene2665	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2702
BAA_2703	BAA_2703		BAA_2703	2454859	2456985	+	penicillin-binding protein	identified by match to protein family HMM PF00905%3B match to protein family HMM PF03717	gene	gene2666	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2703
BAA_2704	BAA_2704		BAA_2704	2457322	2458500	+	putative glycosyl transferase	identified by match to protein family HMM PF00201%3B match to protein family HMM PF04101%3B match to protein family HMM TIGR01426	gene	gene2667	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2704
BAA_2705	BAA_2705		BAA_2705	2458550	2459230	-	aspartate racemase family protein	identified by match to protein family HMM PF01177%3B match to protein family HMM TIGR00035	gene	gene2668	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2705
BAA_2707	BAA_2707		BAA_2707	2459639	2460187	+	putative membrane protein	identified by match to protein family HMM PF07155	gene	gene2669	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2707
BAA_2708	BAA_2708		BAA_2708	2460198	2461898	+	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene2670	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2708
BAA_2709	BAA_2709		BAA_2709	2461891	2462691	+	cobalt transport protein	identified by match to protein family HMM PF02361	gene	gene2671	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2709
BAA_2710	BAA_2710		BAA_2710	2462782	2462934	+	conserved hypothetical protein	identified by match to protein family HMM PF09680%3B match to protein family HMM TIGR01732	gene	gene2672	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2710
BAA_2711	BAA_2711	kinB2	kinB2	2463027	2464295	-	sporulation kinase B	identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518%3B match to protein family HMM PF07694	gene	gene2673	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2711
BAA_2712	BAA_2712		BAA_2712	2464383	2465264	-	conserved hypothetical protein		gene	gene2674	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2712
BAA_2713	BAA_2713		BAA_2713	2465392	2465904	+	conserved hypothetical protein	identified by match to protein family HMM PF04229	gene	gene2675	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2713
BAA_2714	BAA_2714		BAA_2714	2466075	2467064	+	oxidoreductase%2C zinc-binding dehydrogenase family	identified by match to protein family HMM PF00107%3B match to protein family HMM PF08240	gene	gene2676	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2714
BAA_2715	BAA_2715		BAA_2715	2467399	2469537	+	penicillin-binding protein	identified by match to protein family HMM PF00905%3B match to protein family HMM PF03717%3B match to protein family HMM PF03793	gene	gene2677	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2715
BAA_2716	BAA_2716		BAA_2716	2470072	2471310	+	putative permease	identified by match to protein family HMM PF07690	gene	gene2678	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2716
BAA_2717	BAA_2717		BAA_2717	2471422	2472444	+	penicillin-binding protein	identified by match to protein family HMM PF00144	gene	gene2679	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2717
BAA_2718	BAA_2718		BAA_2718	2472449	2473042	+	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene2680	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2718
BAA_2719	BAA_2719		BAA_2719	2473241	2473747	+	conserved hypothetical protein		gene	gene2681	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2719
BAA_2720	BAA_2720		BAA_2720	2473947	2474753	+	degV family protein	identified by match to protein family HMM PF02645%3B match to protein family HMM TIGR00762	gene	gene2682	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2720
BAA_2721	BAA_2721		BAA_2721	2474873	2475445	-	thiJ/pfpI family protein	identified by match to protein family HMM PF01965	gene	gene2683	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2721
BAA_2722	BAA_2722		BAA_2722	2476503	2477465	+	conserved hypothetical protein	identified by match to protein family HMM PF08279	gene	gene2684	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2722
BAA_2723	BAA_2723		BAA_2723	2477540	2478172	+	thiJ/pfpI family protein	identified by match to protein family HMM PF01965	gene	gene2685	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2723
BAA_2724	BAA_2724		BAA_2724	2478530	2479288	+	conserved hypothetical protein	identified by match to protein family HMM PF06161	gene	gene2686	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2724
BAA_2725	BAA_2725		BAA_2725	2479621	2479926	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2687	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2725
BAA_2726	BAA_2726	adP1	adP1	2480587	2481753	+	alkaline D-peptidase	identified by match to protein family HMM PF00144	gene	gene2688	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2726
BAA_2727	BAA_2727		BAA_2727	2482452	2483675	+	conserved domain protein	identified by match to protein family HMM PF03966%3B match to protein family HMM PF08241	gene	gene2689	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2727
BAA_2728	BAA_2728		BAA_2728	2483788	2485092	+	putative permease	identified by match to protein family HMM PF07690	gene	gene2690	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2728
BAA_2729	BAA_2729		BAA_2729	2485133	2485831	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2691	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2729
BAA_2730	BAA_2730		BAA_2730	2486411	2487139	+	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene2692	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2730
BAA_2731	BAA_2731		BAA_2731	2487185	2488048	+	putative glycerophosphoryl diester phosphodiesterase	identified by match to protein family HMM PF03009	gene	gene2693	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2731
BAA_2732	BAA_2732		BAA_2732	2488206	2488694	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2694	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2732
BAA_2733	BAA_2733		BAA_2733	2488797	2489327	+	conserved hypothetical protein		gene	gene2695	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2733
BAA_2734	BAA_2734		BAA_2734	2489372	2490406	-		transcriptional regulator%2C GntR family%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF00155	pseudogene	gene2696	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2734
BAA_2735	BAA_2735		BAA_2735	2490473	2490805	-		transcriptional regulator%2C GntR family%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF00392	pseudogene	gene2697	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2735
BAA_2736	BAA_2736		BAA_2736	2490954	2491868	+	transporter%2C EamA family	identified by match to protein family HMM PF00892	gene	gene2698	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2736
BAA_2737	BAA_2737		BAA_2737	2492007	2493368	+	chitosanase	identified by match to protein family HMM PF01270	gene	gene2699	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2737
BAA_2738	BAA_2738		BAA_2738	2493509	2493649	+		hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by glimmer%3B putative	pseudogene	gene2700	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2738
BAA_2739	BAA_2739		BAA_2739	2493744	2494181	+		acetyltransferase%2C GNAT family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00583	pseudogene	gene2701	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2739
BAA_2740	BAA_2740		BAA_2740	2494204	2494650	+	MutT/NUDIX family protein	identified by match to protein family HMM PF00293	gene	gene2702	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2740
BAA_2741	BAA_2741		BAA_2741	2494853	2495119	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2703	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2741
BAA_2742	BAA_2742		BAA_2742	2495221	2496237	+	conserved hypothetical protein	identified by match to protein family HMM PF00144	gene	gene2704	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2742
BAA_2743	BAA_2743		BAA_2743	2496269	2496412	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2705	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2743
BAA_2744	BAA_2744		BAA_2744	2496697	2497905	+	putative oxalate:formate antiporter	identified by match to protein family HMM PF07690	gene	gene2706	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2744
BAA_2745	BAA_2745		BAA_2745	2498206	2498367	+		conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2707	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2745
BAA_2746	BAA_2746		BAA_2746	2498352	2498807	+		putative transport protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF03596	pseudogene	gene2708	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2746
BAA_2747	BAA_2747		BAA_2747	2499441	2499884	+	MutT/NUDIX family protein	identified by match to protein family HMM PF00293	gene	gene2709	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2747
BAA_2748	BAA_2748	dnaN2	dnaN2	2499916	2501046	+	DNA polymerase III%2C beta subunit	identified by match to protein family HMM PF00712%3B match to protein family HMM PF02767%3B match to protein family HMM PF02768%3B match to protein family HMM TIGR00663	gene	gene2710	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2748
BAA_2749	BAA_2749		BAA_2749	2501069	2501581	+	MutT/NUDIX family protein	identified by match to protein family HMM PF00293	gene	gene2711	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2749
BAA_2750	BAA_2750		BAA_2750	2501679	2502617	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2712	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2750
BAA_2751	BAA_2751		BAA_2751	2502690	2503523	+	hydrolase%2C alpha/beta fold family	identified by match to protein family HMM PF00561	gene	gene2713	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2751
BAA_2752	BAA_2752		BAA_2752	2503578	2504540	-	conserved hypothetical protein		gene	gene2714	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2752
BAA_2753	BAA_2753		BAA_2753	2504837	2505814	+	putative DOD family homing endonuclease		gene	gene2715	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2753
BAA_2754	BAA_2754		BAA_2754	2505950	2507035	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2716	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2754
BAA_2755	BAA_2755		BAA_2755	2507154	2507549	+	putative endoribonuclease L-PSP	identified by match to protein family HMM PF01042	gene	gene2717	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2755
BAA_2756	BAA_2756		BAA_2756	2508247	2509062	-	conserved hypothetical protein	identified by match to protein family HMM PF09234	gene	gene2718	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2756
BAA_2757	BAA_2757		BAA_2757	2509141	2509635	-	conserved domain protein	identified by match to protein family HMM PF09350	gene	gene2719	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2757
BAA_2758	BAA_2758		BAA_2758	2509661	2510767	-		putative esterase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00756	pseudogene	gene2720	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2758
BAA_2759	BAA_2759		BAA_2759	2510856	2511221	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2721	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2759
BAA_2760	BAA_2760		BAA_2760	2511487	2511858	-	conserved hypothetical protein		gene	gene2722	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2760
BAA_2761	BAA_2761		BAA_2761	2511871	2512593	-		putative phospholipase%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene2723	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2761
BAA_2762	BAA_2762		BAA_2762	2512901	2513278	+	conserved hypothetical protein	identified by match to protein family HMM PF08000	gene	gene2724	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2762
BAA_2763	BAA_2763		BAA_2763	2513400	2513873	-	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene2725	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2763
BAA_2764	BAA_2764		BAA_2764	2513875	2514396	-	conserved hypothetical protein		gene	gene2726	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2764
BAA_2765	BAA_2765		BAA_2765	2514413	2514940	-	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene2727	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2765
BAA_2766	BAA_2766		BAA_2766	2515004	2516326	-	conserved hypothetical protein		gene	gene2728	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2766
BAA_2767	BAA_2767		BAA_2767	2516409	2516816	-		putative bacitracin resistance protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02673	pseudogene	gene2729	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2767
BAA_2768	BAA_2768		BAA_2768	2516782	2517189	-		undecaprenyl-diphosphatase 4 (Undecaprenyl pyrophosphatephosphatase 4) (Bacitracin resistance protein 4)%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02673	pseudogene	gene2730	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2768
BAA_2769	BAA_2769		BAA_2769	2517323	2517529	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2731	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2769
BAA_2770	BAA_2770		BAA_2770	2517582	2517962	-	GIY-YIG catalytic domain protein	identified by match to protein family HMM PF01541	gene	gene2732	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2770
BAA_2771	BAA_2771		BAA_2771	2518120	2518602	-		acetyltransferase%2C GNAT family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00583	pseudogene	gene2733	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2771
BAA_2772	BAA_2772		BAA_2772	2518630	2519202	-	putative membrane protein		gene	gene2734	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2772
BAA_2773	BAA_2773		BAA_2773	2519383	2520813	-	conserved domain protein		gene	gene2735	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2773
BAA_2774	BAA_2774		BAA_2774	2520951	2521208	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2736	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2774
BAA_2775	BAA_2775		BAA_2775	2521348	2521479	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2737	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2775
BAA_2776	BAA_2776		BAA_2776	2521592	2522254	-	conserved hypothetical protein		gene	gene2738	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2776
BAA_2777	BAA_2777		BAA_2777	2522251	2522412	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2739	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2777
BAA_2778	BAA_2778		BAA_2778	2522562	2522999	-	MutT/NUDIX family protein	identified by match to protein family HMM PF00293	gene	gene2740	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2778
BAA_2779	BAA_2779		BAA_2779	2523202	2524317	-	oxidoreductase%2C DadA family	identified by match to protein family HMM PF01266	gene	gene2741	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2779
BAA_2780	BAA_2780		BAA_2780	2524443	2525096	-	conserved domain protein		gene	gene2742	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2780
BAA_2781	BAA_2781		BAA_2781	2525244	2526011	-	N-acetyltransferase family protein	identified by match to protein family HMM PF00797	gene	gene2743	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2781
BAA_2782	BAA_2782		BAA_2782	2526150	2526653	-	conserved hypothetical protein	identified by match to protein family HMM PF08877	gene	gene2744	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2782
BAA_2783	BAA_2783		BAA_2783	2526762	2527130	-	conserved hypothetical protein		gene	gene2745	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2783
BAA_2784	BAA_2784		BAA_2784	2527267	2527959	-	hydrolase%2C haloacid dehalogenase-like family	identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01509%3B match to protein family HMM TIGR01549	gene	gene2746	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2784
BAA_2785	BAA_2785		BAA_2785	2528221	2528757	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2747	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2785
BAA_2786	BAA_2786		BAA_2786	2528959	2529141	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2748	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2786
BAA_2787	BAA_2787		BAA_2787	2530109	2530549	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2749	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2787
BAA_2788	BAA_2788		BAA_2788	2530515	2531069	+		carboxylesterase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF07859	pseudogene	gene2750	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2788
BAA_2789	BAA_2789		BAA_2789	2531188	2532642	-	decarboxylase%2C pyridoxal-dependent	identified by match to protein family HMM PF00282%3B match to protein family HMM PF01212	gene	gene2751	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2789
BAA_2790	BAA_2790		BAA_2790	2532698	2533852	-		putative bacitracin synthetase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00668	pseudogene	gene2752	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2790
BAA_2791	BAA_2791		BAA_2791	2533956	2539301	-		bacitracin synthetase 1 (BA1)%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00501%3B match to protein family HMM PF00550%3B match to protein family HMM PF00668%3B match to protein family HMM PF08415%3B match to protein family HMM TIGR01733	pseudogene	gene2753	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2791
BAA_2792	BAA_2792		BAA_2792	2539334	2540311	-	conserved domain protein	identified by match to protein family HMM TIGR03605	gene	gene2754	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2792
BAA_2793	BAA_2793		BAA_2793	2541181	2543739	-	putative pullulanase	identified by match to protein family HMM PF00128%3B match to protein family HMM PF02806%3B match to protein family HMM PF02922%3B match to protein family HMM PF03714%3B match to protein family HMM TIGR02104	gene	gene2755	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2793
BAA_2794	BAA_2794		BAA_2794	2544224	2545927	-	metalloendopeptidase	identified by match to protein family HMM PF01447%3B match to protein family HMM PF02868%3B match to protein family HMM PF03413%3B match to protein family HMM PF07504	gene	gene2756	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2794
BAA_2795	BAA_2795		BAA_2795	2546387	2547364	-	conserved hypothetical protein		gene	gene2757	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2795
BAA_2796	BAA_2796		BAA_2796	2547365	2547895	-	putative RNA polymerase sigma factor SigX	identified by match to protein family HMM PF04542%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937	gene	gene2758	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2796
BAA_2797	BAA_2797		BAA_2797	2548146	2548625	-	conserved hypothetical protein	identified by match to protein family HMM PF06445	gene	gene2759	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2797
BAA_2798	BAA_2798	secY2	secY2	2549074	2550378	+	preprotein translocase%2C SecY subunit	identified by match to protein family HMM PF00344%3B match to protein family HMM TIGR00967	gene	gene2760	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2798
BAA_2799	BAA_2799		BAA_2799	2550397	2551422	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2761	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2799
BAA_2800	BAA_2800		BAA_2800	2551557	2552474	-	transporter%2C EamA family	identified by match to protein family HMM PF00892	gene	gene2762	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2800
BAA_2801	BAA_2801		BAA_2801	2552621	2554054	+	transcriptional regulator%2C GntR family/aminotransferase%2C class I protein	identified by match to protein family HMM PF00155%3B match to protein family HMM PF00392	gene	gene2763	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2801
BAA_2802	BAA_2802		BAA_2802	2554414	2555277	+	hydrolase%2C alpha/beta fold family	identified by match to protein family HMM PF00561	gene	gene2764	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2802
BAA_2803	BAA_2803		BAA_2803	2555414	2555722	-		group-specific protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2765	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2803
BAA_2804	BAA_2804		BAA_2804	2555734	2556903	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2766	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2804
BAA_2805	BAA_2805		BAA_2805	2557113	2557517	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2767	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2805
BAA_2806	BAA_2806		BAA_2806	2557562	2558098	-	conserved hypothetical protein	identified by match to protein family HMM PF08002	gene	gene2768	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2806
BAA_2807	BAA_2807		BAA_2807	2558115	2559182	-	conserved hypothetical protein	identified by match to protein family HMM PF06081	gene	gene2769	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2807
BAA_2808	BAA_2808		BAA_2808	2559237	2559734	-	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene2770	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2808
BAA_2809	BAA_2809		BAA_2809	2559760	2560116	-	putative lipoprotein		gene	gene2771	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2809
BAA_2810	BAA_2810		BAA_2810	2560229	2560825	-	putative lipoprotein	identified by match to protein family HMM PF09580%3B match to protein family HMM TIGR02898	gene	gene2772	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2810
BAA_2811	BAA_2811	ypeB	ypeB	2560852	2562192	-	germination protein YpeB	identified by match to protein family HMM PF03413%3B match to protein family HMM TIGR02889	gene	gene2773	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2811
BAA_2812	BAA_2812	sleB	sleB	2562208	2562969	-	spore cortex-lytic enzyme prepeptide	identified by match to protein family HMM PF01471%3B match to protein family HMM PF07486%3B match to protein family HMM TIGR02869	gene	gene2774	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2812
BAA_2813	BAA_2813		BAA_2813	2563115	2563447	+	conserved hypothetical protein		gene	gene2775	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2813
BAA_2814	BAA_2814		BAA_2814	2563548	2564477	-	conserved hypothetical protein	identified by match to protein family HMM PF00144	gene	gene2776	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2814
BAA_2815	BAA_2815	kynA	kynA	2564594	2565433	-	tryptophan 2%2C3-dioxygenase	identified by match to protein family HMM PF03301%3B match to protein family HMM TIGR03036	gene	gene2777	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2815
BAA_2816	BAA_2816	kynB	kynB	2565467	2566096	-	arylformamidase	identified by match to protein family HMM PF04199%3B match to protein family HMM TIGR03035	gene	gene2778	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2816
BAA_2817	BAA_2817	kynU	kynU	2566099	2567385	-	kynureninase	identified by match to protein family HMM PF00266%3B match to protein family HMM TIGR01814	gene	gene2779	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2817
BAA_2818	BAA_2818		BAA_2818	2567545	2568156	+	transcriptional regulator%2C TetR family	identified by match to protein family HMM PF00440	gene	gene2780	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2818
BAA_2819	BAA_2819		BAA_2819	2568192	2568629	-	MutT/NUDIX family protein	identified by match to protein family HMM PF00293	gene	gene2781	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2819
BAA_2820	BAA_2820		BAA_2820	2568726	2569529	+	conserved domain protein	identified by match to protein family HMM PF00797	gene	gene2782	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2820
BAA_2821	BAA_2821		BAA_2821	2569557	2570015	-	conserved hypothetical protein		gene	gene2783	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2821
BAA_2822	BAA_2822		BAA_2822	2570167	2570400	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2784	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2822
BAA_2823	BAA_2823		BAA_2823	2570537	2570794	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2785	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2823
BAA_2824	BAA_2824		BAA_2824	2570906	2572756	-	putative acetoin operon transcriptional activator	identified by match to protein family HMM PF00158%3B match to protein family HMM PF01590%3B match to protein family HMM PF02954%3B match to protein family HMM PF07728	gene	gene2786	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2824
BAA_2825	BAA_2825		BAA_2825	2572881	2573054	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2787	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2825
BAA_2826	BAA_2826		BAA_2826	2573072	2573287	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2788	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2826
BAA_2827	BAA_2827		BAA_2827	2573438	2573980	-	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene2789	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2827
BAA_2828	BAA_2828		BAA_2828	2573993	2574763	-	transcriptional regulator%2C DeoR family	identified by match to protein family HMM PF00455%3B match to protein family HMM PF08220%3B match to protein family HMM PF08279	gene	gene2790	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2828
BAA_2829	BAA_2829		BAA_2829	2575014	2575511	+	putative lipoprotein		gene	gene2791	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2829
BAA_2830	BAA_2830		BAA_2830	2575571	2576173	-	conserved hypothetical protein	identified by match to protein family HMM PF03848%3B match to protein family HMM PF08241%3B match to protein family HMM PF08242	gene	gene2792	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2830
BAA_2831	BAA_2831		BAA_2831	2576206	2577111	-	putative thioredoxin reductase	identified by match to protein family HMM PF03486%3B match to protein family HMM PF07992	gene	gene2793	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2831
BAA_2832	BAA_2832		BAA_2832	2577205	2577606	-	rrf2 family protein	identified by match to protein family HMM PF02082%3B match to protein family HMM TIGR00738	gene	gene2794	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2832
BAA_2833	BAA_2833		BAA_2833	2577664	2577780	-		hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by glimmer%3B putative	pseudogene	gene2795	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2833
BAA_2834	BAA_2834		BAA_2834	2577802	2578068	-		hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by glimmer%3B putative	pseudogene	gene2796	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2834
BAA_2835	BAA_2835		BAA_2835	2578290	2578886	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2797	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2835
BAA_2836	BAA_2836	acoL	acoL	2578969	2580348	-	acetoin dehydrogenase complex%2C dihydrolipoamide dehydrogenase component	identified by match to protein family HMM PF00070%3B match to protein family HMM PF01134%3B match to protein family HMM PF02852%3B match to protein family HMM PF03486%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR01350	gene	gene2798	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2836
BAA_2837	BAA_2837	acoC	acoC	2580364	2581560	-	acetoin dehydrogenase%2C E2 component%2C dihydrolipoyllysine-residue acetyltransferase	identified by match to protein family HMM PF00198%3B match to protein family HMM PF00364%3B match to protein family HMM PF02817	gene	gene2799	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2837
BAA_2838	BAA_2838	acoB	acoB	2581588	2582622	-	TPP-dependent acetoin dehydrogenase E1 beta-subunit	identified by match to protein family HMM PF02779%3B match to protein family HMM PF02780	gene	gene2800	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2838
BAA_2839	BAA_2839	acoA	acoA	2582640	2583638	-	TPP-dependent acetoin dehydrogenase E1 alpha-subunit	identified by match to protein family HMM PF00676	gene	gene2801	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2839
BAA_2840	BAA_2840		BAA_2840	2583622	2583777	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2802	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2840
BAA_2841	BAA_2841		BAA_2841	2583808	2584287	-	conserved hypothetical protein		gene	gene2803	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2841
BAA_2842	BAA_2842		BAA_2842	2584446	2585321	+	oxidoreductase%2C short-chain dehydrogenase/reductase family	identified by match to protein family HMM PF00106%3B match to protein family HMM PF08659	gene	gene2804	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2842
BAA_2843	BAA_2843		BAA_2843	2585363	2585872	+	conserved hypothetical protein	identified by match to protein family HMM PF04229	gene	gene2805	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2843
BAA_2844	BAA_2844		BAA_2844	2585949	2586329	-	conserved hypothetical protein		gene	gene2806	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2844
BAA_2845	BAA_2845		BAA_2845	2586349	2586789	-	MutT/NUDIX family protein	identified by match to protein family HMM PF00293	gene	gene2807	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2845
BAA_2846	BAA_2846		BAA_2846	2587210	2588034	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2808	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2846
BAA_2847	BAA_2847		BAA_2847	2588149	2588316	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2809	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2847
BAA_2848	BAA_2848		BAA_2848	2588793	2589629	-	glycine betaine/L-proline ABC transporter%2C permease protein	identified by match to protein family HMM PF00528	gene	gene2810	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2848
BAA_2849	BAA_2849	proV2	proV2	2589622	2590827	-	glycine betaine/L-proline ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005%3B match to protein family HMM PF00571%3B match to protein family HMM TIGR01186	gene	gene2811	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2849
BAA_2850	BAA_2850		BAA_2850	2590999	2591856	+	putative glycine betaine/L-proline ABC transporter%2C glycine betaine/L-proline-binding protein	identified by match to protein family HMM PF04069	gene	gene2812	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2850
BAA_2851	BAA_2851	clpP1	clpP1	2591902	2592483	-	ATP-dependent Clp protease%2C proteolytic subunit ClpP	identified by match to protein family HMM PF00574%3B match to protein family HMM TIGR00493	gene	gene2813	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2851
BAA_2852	BAA_2852		BAA_2852	2592505	2593191	-	RNA polymerase sigma-70 factor%2C ECF subfamily	identified by match to protein family HMM PF04542%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937	gene	gene2814	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2852
BAA_2853	BAA_2853	fdX	fdX	2593335	2593601	+	ferredoxin		gene	gene2815	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2853
BAA_2854	BAA_2854	rpiA	rpiA	2593606	2594268	+	ribose 5-phosphate isomerase A	identified by match to protein family HMM PF06026%3B match to protein family HMM TIGR00021	gene	gene2816	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2854
BAA_2855	BAA_2855		BAA_2855	2594376	2594810	+	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene2817	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2855
BAA_2856	BAA_2856		BAA_2856	2594941	2596308	-	putative chitinase	identified by match to protein family HMM PF00041%3B match to protein family HMM PF02839%3B match to protein family HMM PF03067	gene	gene2818	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2856
BAA_2857	BAA_2857		BAA_2857	2596746	2597264	-	putative DNA topology modulation protein FlaR		gene	gene2819	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2857
BAA_2858	BAA_2858		BAA_2858	2597261	2597989	-		conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene2820	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2858
BAA_2859	BAA_2859		BAA_2859	2598026	2598190	-		aminoglycoside phosphotransferase%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene2821	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2859
BAA_2860	BAA_2860		BAA_2860	2598206	2598601	-	conserved hypothetical protein		gene	gene2822	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2860
BAA_2861	BAA_2861		BAA_2861	2598667	2598798	-	conserved domain protein		gene	gene2823	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2861
BAA_2862	BAA_2862		BAA_2862	2598817	2598954	-	conserved domain protein		gene	gene2824	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2862
BAA_2863	BAA_2863		BAA_2863	2599060	2599863	-	conserved hypothetical protein	identified by match to protein family HMM PF08874	gene	gene2825	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2863
BAA_2864	BAA_2864		BAA_2864	2599939	2600274	-	conserved hypothetical protein	identified by match to protein family HMM PF04237	gene	gene2826	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2864
BAA_2865	BAA_2865		BAA_2865	2600287	2600691	-	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene2827	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2865
BAA_2866	BAA_2866		BAA_2866	2600939	2602324	+	putative S-layer protein	identified by match to protein family HMM PF00395%3B match to protein family HMM PF00753	gene	gene2828	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2866
BAA_2867	BAA_2867		BAA_2867	2602327	2602539	+	conserved hypothetical protein		gene	gene2829	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2867
BAA_2868	BAA_2868		BAA_2868	2602605	2603411	-	glycosyl hydrolase%2C family 25	identified by match to protein family HMM PF01183	gene	gene2830	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2868
BAA_2869	BAA_2869		BAA_2869	2603618	2604034	-	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene2831	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2869
BAA_2870	BAA_2870		BAA_2870	2604061	2604438	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2832	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2870
BAA_2871	BAA_2871		BAA_2871	2604435	2605211	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2833	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2871
BAA_2872	BAA_2872		BAA_2872	2605356	2605562	-		acetyltransferase%2C GNAT family%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2834	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2872
BAA_2873	BAA_2873		BAA_2873	2605697	2605867	-		phosphiNothricin n-acetyltransferase%2C acetyltransferase%2C gnat family%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2835	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2873
BAA_2874	BAA_2874		BAA_2874	2605902	2606912	-	putative membrane protein		gene	gene2836	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2874
BAA_2875	BAA_2875		BAA_2875	2606899	2607243	-	conserved hypothetical protein	identified by match to protein family HMM PF03551	gene	gene2837	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2875
BAA_2876	BAA_2876		BAA_2876	2607413	2607745	-	conserved hypothetical protein	identified by match to protein family HMM PF06108	gene	gene2838	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2876
BAA_2877	BAA_2877		BAA_2877	2607808	2609877	-	uvrD/Rep helicase family protein		gene	gene2839	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2877
BAA_2878	BAA_2878		BAA_2878	2610241	2611107	+	CAAX amino terminal protease family protein	identified by match to protein family HMM PF02517	gene	gene2840	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2878
BAA_2879	BAA_2879		BAA_2879	2611127	2611870	-	putative methyltransferase	identified by match to protein family HMM PF08241	gene	gene2841	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2879
BAA_2880	BAA_2880		BAA_2880	2612055	2612438	-	btrG family protein	identified by match to protein family HMM PF06094	gene	gene2842	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2880
BAA_2881	BAA_2881	recQ2	recQ2	2612464	2614581	-	ATP-dependent DNA helicase RecQ	identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF00570%3B match to protein family HMM PF09382%3B match to protein family HMM TIGR00614%3B match to protein family HMM TIGR01389	gene	gene2843	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2881
BAA_2882	BAA_2882		BAA_2882	2615655	2616278	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2844	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2882
BAA_2883	BAA_2883		BAA_2883	2616896	2617348	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2845	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2883
BAA_2884	BAA_2884		BAA_2884	2617848	2618297	-	conserved hypothetical protein		gene	gene2846	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2884
BAA_2885	BAA_2885		BAA_2885	2618396	2619523	-		hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by glimmer%3B putative	pseudogene	gene2847	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2885
BAA_2886	BAA_2886		BAA_2886	2619685	2619882	+	conserved hypothetical protein		gene	gene2848	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2886
BAA_2887	BAA_2887		BAA_2887	2619901	2621547	-	peptidase M3 family protein	identified by match to protein family HMM PF01432%3B match to protein family HMM TIGR02289	gene	gene2849	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2887
BAA_2888	BAA_2888	ppaC	ppaC	2621653	2622582	-	inorganic pyrophosphatase%2C manganese-dependent	identified by match to protein family HMM PF01368%3B match to protein family HMM PF02833	gene	gene2850	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2888
BAA_2889	BAA_2889		BAA_2889	2622744	2623409	-	putative chitin binding protein	identified by match to protein family HMM PF03067	gene	gene2851	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2889
BAA_2890	BAA_2890		BAA_2890	2623634	2624137	-	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene2852	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2890
BAA_2891	BAA_2891		BAA_2891	2624355	2624723	-	carboxymuconolactone decarboxylase	identified by match to protein family HMM PF02627%3B match to protein family HMM TIGR00778	gene	gene2853	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2891
BAA_2892	BAA_2892		BAA_2892	2624826	2626316	-	sodium/alanine symporter family protein	identified by match to protein family HMM PF01235%3B match to protein family HMM TIGR00835	gene	gene2854	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2892
BAA_2893	BAA_2893		BAA_2893	2626424	2627908	-	aldehyde dehydrogenase (NAD) family protein	identified by match to protein family HMM PF00171	gene	gene2855	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2893
BAA_2894	BAA_2894	dapA1	dapA1	2627927	2628823	-	dihydrodipicolinate synthase	identified by match to protein family HMM PF00701%3B match to protein family HMM TIGR00674	gene	gene2856	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2894
BAA_2895	BAA_2895		BAA_2895	2628846	2629787	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2857	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2895
BAA_2896	BAA_2896		BAA_2896	2629784	2630821	-	putative proline racemase	identified by match to protein family HMM PF05544	gene	gene2858	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2896
BAA_2897	BAA_2897		BAA_2897	2630818	2631993	-	putative glycine oxidase	identified by match to protein family HMM PF01266	gene	gene2859	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2897
BAA_2898	BAA_2898		BAA_2898	2632174	2633835	+	sensory box sigma-54 dependent DNA-binding response regulator	identified by match to protein family HMM PF00158%3B match to protein family HMM PF02954%3B match to protein family HMM TIGR00229	gene	gene2860	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2898
BAA_2899	BAA_2899		BAA_2899	2634037	2634186	+		hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by glimmer%3B putative	pseudogene	gene2861	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2899
BAA_2900	BAA_2900		BAA_2900	2634183	2634515	+		putative sarcosine oxidase%2C alpha subunit%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00111	pseudogene	gene2862	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2900
BAA_2901	BAA_2901		BAA_2901	2634512	2635747	+	pyridine nucleotide-disulphide oxidoreductase	identified by match to protein family HMM PF01134%3B match to protein family HMM PF01266%3B match to protein family HMM PF03486%3B match to protein family HMM PF07992	gene	gene2863	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2901
BAA_2902	BAA_2902		BAA_2902	2635772	2636080	-	conserved hypothetical protein		gene	gene2864	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2902
BAA_2903	BAA_2903		BAA_2903	2636068	2636517	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2865	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2903
BAA_2904	BAA_2904		BAA_2904	2636776	2637540	+	conserved hypothetical protein	identified by match to protein family HMM PF08876	gene	gene2866	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2904
BAA_2905	BAA_2905		BAA_2905	2637775	2638380	+	dedA family protein	identified by match to protein family HMM PF09335	gene	gene2867	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2905
BAA_2906	BAA_2906		BAA_2906	2638524	2638904	-		conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2868	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2906
BAA_2907	BAA_2907		BAA_2907	2639045	2639269	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2869	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2907
BAA_2908	BAA_2908	dltD2	dltD2	2639309	2640490	-	dltD protein	identified by match to protein family HMM PF04914%3B match to protein family HMM PF04915%3B match to protein family HMM PF04918	gene	gene2870	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2908
BAA_2909	BAA_2909		BAA_2909	2640757	2641284	-	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene2871	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2909
BAA_2910	BAA_2910		BAA_2910	2641402	2643024	-	putative oligopeptide ABC transporter%2C oligopeptide-binding protein	identified by match to protein family HMM PF00496	gene	gene2872	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2910
BAA_2911	BAA_2911		BAA_2911	2643045	2644046	-	NLP/P60 family protein	identified by match to protein family HMM PF00877	gene	gene2873	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2911
BAA_2912	BAA_2912		BAA_2912	2644086	2645138	-	mandelate racemase/muconate lactonizing enzyme family protein	identified by match to protein family HMM PF01188%3B match to protein family HMM PF02746	gene	gene2874	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2912
BAA_2913	BAA_2913	divIC2	divIC2	2645876	2646232	-	cell division protein DivIC	identified by match to protein family HMM PF04977	gene	gene2875	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2913
BAA_2914	BAA_2914		BAA_2914	2646627	2646782	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2876	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2914
BAA_2915	BAA_2915		BAA_2915	2646896	2647327	+	cytidine and deoxycytidylate deaminase family protein	identified by match to protein family HMM PF00383	gene	gene2877	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2915
BAA_2916	BAA_2916		BAA_2916	2647584	2647814	-	conserved domain protein		gene	gene2878	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2916
BAA_2917	BAA_2917		BAA_2917	2648126	2648389	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2879	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2917
BAA_2918	BAA_2918		BAA_2918	2648591	2649355	-	conserved hypothetical protein	identified by match to protein family HMM PF08241%3B match to protein family HMM PF08242	gene	gene2880	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2918
BAA_2919	BAA_2919		BAA_2919	2649560	2649838	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2881	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2919
BAA_2920	BAA_2920		BAA_2920	2649896	2651689	-	hydrolase%2C CocE/NonD family	identified by match to protein family HMM PF02129%3B match to protein family HMM PF08530%3B match to protein family HMM TIGR00976	gene	gene2882	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2920
BAA_2921	BAA_2921		BAA_2921	2651890	2653266	-	putative sensor histidine kinase SrrB	identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518	gene	gene2883	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2921
BAA_2922	BAA_2922		BAA_2922	2653306	2653905	-		DNA-binding response regulator%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486	pseudogene	gene2884	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2922
BAA_2923	BAA_2923		BAA_2923	2654027	2654443	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2885	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2923
BAA_2924	BAA_2924		BAA_2924	2654590	2655036	-	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene2886	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2924
BAA_2925	BAA_2925		BAA_2925	2655305	2656009	-	conserved hypothetical protein		gene	gene2887	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2925
BAA_2926	BAA_2926		BAA_2926	2656062	2657441	-		putative MTA/SAH nucleosidase / phosphatase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00702%3B match to protein family HMM PF01048%3B match to protein family HMM TIGR01704	pseudogene	gene2888	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2926
BAA_2927	BAA_2927		BAA_2927	2657461	2658459	-		phosphotransferase enzyme family protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01636	pseudogene	gene2889	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2927
BAA_2928	BAA_2928		BAA_2928	2658475	2659227	-	glycosyl transferase%2C WecB/TagA/CpsF family	identified by match to protein family HMM PF03808%3B match to protein family HMM TIGR00696	gene	gene2890	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2928
BAA_2929	BAA_2929		BAA_2929	2659240	2660424	-		peptidase%2C family M3%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01432	pseudogene	gene2891	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2929
BAA_2930	BAA_2930		BAA_2930	2660462	2660818	-		oligoendopeptidase F%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2892	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2930
BAA_2931	BAA_2931		BAA_2931	2661025	2661165	-	conserved domain protein		gene	gene2893	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2931
BAA_2932	BAA_2932		BAA_2932	2661178	2662038	-	degV family protein	identified by match to protein family HMM PF02645%3B match to protein family HMM TIGR00762	gene	gene2894	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2932
BAA_2933	BAA_2933		BAA_2933	2662263	2662694	+	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene2895	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2933
BAA_2934	BAA_2934		BAA_2934	2663230	2663373	-	conserved domain protein		gene	gene2896	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2934
BAA_2935	BAA_2935		BAA_2935	2663842	2664162	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2897	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2935
BAA_2936	BAA_2936		BAA_2936	2664217	2665752	-	drug resistance transporter%2C EmrB/QacA family	identified by match to protein family HMM PF07690%3B match to protein family HMM TIGR00711	gene	gene2898	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2936
BAA_2937	BAA_2937		BAA_2937	2665777	2666484	-	conserved hypothetical protein		gene	gene2899	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2937
BAA_2938	BAA_2938		BAA_2938	2666503	2667213	-	conserved hypothetical protein	identified by match to protein family HMM PF04519	gene	gene2900	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2938
BAA_2939	BAA_2939		BAA_2939	2667227	2667850	-	conserved hypothetical protein		gene	gene2901	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2939
BAA_2940	BAA_2940		BAA_2940	2668011	2669747	-	bacterial extracellular solute-binding protein%2C family 5	identified by match to protein family HMM PF00496	gene	gene2902	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2940
BAA_2941	BAA_2941		BAA_2941	2669849	2671087	+	major facilitator family transporter	identified by match to protein family HMM PF07690	gene	gene2903	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2941
BAA_2942	BAA_2942		BAA_2942	2671171	2671815	-	putative lipoprotein		gene	gene2904	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2942
BAA_2943	BAA_2943		BAA_2943	2671843	2672697	-	conserved hypothetical protein		gene	gene2905	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2943
BAA_2944	BAA_2944		BAA_2944	2672796	2672930	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2906	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2944
BAA_2945	BAA_2945		BAA_2945	2672908	2673303	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2907	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2945
BAA_2946	BAA_2946		BAA_2946	2673381	2673623	-	conserved hypothetical protein	identified by match to protein family HMM PF04226	gene	gene2908	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2946
BAA_2947	BAA_2947		BAA_2947	2673797	2674762	-	inosine-uridine preferring nucleoside hydrolase family protein	identified by match to protein family HMM PF01156	gene	gene2909	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2947
BAA_2948	BAA_2948		BAA_2948	2674840	2675028	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2910	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2948
BAA_2949	BAA_2949		BAA_2949	2675107	2675883	-		methyltransferase%2C UbiE/COQ5 family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01209%3B match to protein family HMM PF08241%3B match to protein family HMM PF08242	pseudogene	gene2911	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2949
BAA_2950	BAA_2950		BAA_2950	2676079	2676447	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2912	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2950
BAA_2951	BAA_2951		BAA_2951	2676599	2676718	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2913	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2951
BAA_2952	BAA_2952		BAA_2952	2677131	2677685	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2914	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2952
BAA_2953	BAA_2953		BAA_2953	2677949	2679151	+	putative transporter	identified by match to protein family HMM PF07690	gene	gene2915	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2953
BAA_2954	BAA_2954		BAA_2954	2679774	2680136	+	putative lipoprotein		gene	gene2916	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2954
BAA_2955	BAA_2955		BAA_2955	2680317	2681516	+	aminotransferase%2C classes I and II	identified by match to protein family HMM PF00155	gene	gene2917	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2955
BAA_2956	BAA_2956		BAA_2956	2681573	2681971	+	putative (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase	identified by match to protein family HMM PF07977	gene	gene2918	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2956
BAA_2957	BAA_2957	coaA	coaA	2682064	2682894	+	pantothenate kinase	identified by match to protein family HMM PF03630%3B match to protein family HMM TIGR00555	gene	gene2919	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2957
BAA_2958	BAA_2958		BAA_2958	2683111	2683740	-	CAAX amino terminal protease family protein	identified by match to protein family HMM PF02517	gene	gene2920	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2958
BAA_2959	BAA_2959		BAA_2959	2683928	2684059	-		putative CdcD protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2921	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2959
BAA_2960	BAA_2960		BAA_2960	2684119	2684406	-		CcdC protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2922	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2960
BAA_2961	BAA_2961		BAA_2961	2684439	2685110	-	putative membrane protein		gene	gene2923	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2961
BAA_2962	BAA_2962		BAA_2962	2685107	2685292	-		putative ABC transporter%2C ATP-binding protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2924	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2962
BAA_2963	BAA_2963		BAA_2963	2685262	2685978	-		ABC transporter%2C ATP-binding protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00005	pseudogene	gene2925	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2963
BAA_2964	BAA_2964		BAA_2964	2686082	2686354	-		putative transcriptional regulator%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00392	pseudogene	gene2926	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2964
BAA_2965	BAA_2965		BAA_2965	2686478	2686648	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2927	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2965
BAA_2966	BAA_2966		BAA_2966	2687089	2687229	+	conserved hypothetical protein	identified by match to protein family HMM PF09501%3B match to protein family HMM TIGR02413	gene	gene2928	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2966
BAA_2967	BAA_2967		BAA_2967	2687257	2687400	+	conserved hypothetical protein	identified by match to protein family HMM PF09501%3B match to protein family HMM TIGR02413	gene	gene2929	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2967
BAA_2968	BAA_2968		BAA_2968	2687429	2687572	+	conserved hypothetical protein	identified by match to protein family HMM PF09501%3B match to protein family HMM TIGR02413	gene	gene2930	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2968
BAA_2969	BAA_2969		BAA_2969	2687599	2687742	+	conserved hypothetical protein	identified by match to protein family HMM PF09501%3B match to protein family HMM TIGR02413	gene	gene2931	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2969
BAA_2970	BAA_2970		BAA_2970	2687768	2687908	+	conserved hypothetical protein	identified by match to protein family HMM PF09501%3B match to protein family HMM TIGR02413	gene	gene2932	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2970
BAA_2971	BAA_2971		BAA_2971	2688316	2689401	-	putative membrane protein	identified by match to protein family HMM PF01594	gene	gene2933	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2971
BAA_2972	BAA_2972		BAA_2972	2689550	2690371	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2934	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2972
BAA_2973	BAA_2973	ssuD	ssuD	2690837	2691949	-	alkanesulfonate monooxygenase	identified by match to protein family HMM PF00296%3B match to protein family HMM TIGR03565	gene	gene2935	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2973
BAA_2974	BAA_2974		BAA_2974	2692026	2692874	-	putative sulfonate ABC transporter%2C permease protein	identified by match to protein family HMM PF00528	gene	gene2936	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2974
BAA_2975	BAA_2975		BAA_2975	2692891	2693877	-	putative sulfonate ABC transporter%2C sulfonate-binding protein	identified by match to protein family HMM PF04069%3B match to protein family HMM PF09084%3B match to protein family HMM TIGR01728	gene	gene2937	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2975
BAA_2976	BAA_2976		BAA_2976	2693895	2694650	-	putative sulfonate ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene2938	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2976
BAA_2977	BAA_2977		BAA_2977	2694878	2695606	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2939	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2977
BAA_2978	BAA_2978		BAA_2978	2695603	2696193	-	transcriptional regulator%2C TetR family	identified by match to protein family HMM PF00440	gene	gene2940	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2978
BAA_2979	BAA_2979		BAA_2979	2696403	2696912	-	conserved domain protein		gene	gene2941	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2979
BAA_2980	BAA_2980		BAA_2980	2697016	2697510	-	MutT/NUDIX family protein	identified by match to protein family HMM PF00293	gene	gene2942	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2980
BAA_2981	BAA_2981		BAA_2981	2697503	2698552	-	putative membrane protein		gene	gene2943	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2981
BAA_2982	BAA_2982		BAA_2982	2698565	2699038	-	TPR domain protein	identified by match to protein family HMM PF07719	gene	gene2944	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2982
BAA_2983	BAA_2983		BAA_2983	2699162	2699851	-	putative flavoprotein	identified by match to protein family HMM PF04127	gene	gene2945	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2983
BAA_2984	BAA_2984	aacC7	aacC7	2699867	2700670	-	aminoglycoside N3-acetyltransferase	identified by match to protein family HMM PF02522	gene	gene2946	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2984
BAA_2985	BAA_2985		BAA_2985	2700836	2701285	+	putative lipoprotein		gene	gene2947	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2985
BAA_2986	BAA_2986		BAA_2986	2701338	2702585	-	putative glutathionylspermidine synthase	identified by match to protein family HMM PF03738	gene	gene2948	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2986
BAA_2987	BAA_2987		BAA_2987	2702606	2703217	-	putative lipoprotein		gene	gene2949	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2987
BAA_2988	BAA_2988		BAA_2988	2703317	2703724	-	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene2950	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2988
BAA_2989	BAA_2989		BAA_2989	2703781	2704719	-	putative membrane protein		gene	gene2951	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2989
BAA_2990	BAA_2990		BAA_2990	2704789	2705310	-	conserved hypothetical protein		gene	gene2952	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2990
BAA_2991	BAA_2991		BAA_2991	2705326	2705826	-	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene2953	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2991
BAA_2992	BAA_2992		BAA_2992	2705861	2706406	-	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene2954	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2992
BAA_2993	BAA_2993		BAA_2993	2706422	2707123	-	conserved domain protein	identified by match to protein family HMM PF01909	gene	gene2955	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2993
BAA_2994	BAA_2994		BAA_2994	2707140	2707823	-	conserved hypothetical protein	identified by match to protein family HMM PF06352	gene	gene2956	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2994
BAA_2995	BAA_2995		BAA_2995	2708189	2708449	-	putative lipoprotein		gene	gene2957	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2995
BAA_2996	BAA_2996		BAA_2996	2708439	2708561	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2958	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2996
BAA_2997	BAA_2997		BAA_2997	2708667	2709494	+	polysaccharide deacetylase	identified by match to protein family HMM PF01522	gene	gene2959	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2997
BAA_2998	BAA_2998		BAA_2998	2709654	2710316	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2960	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2998
BAA_2999	BAA_2999		BAA_2999	2710427	2711098	+	putative membrane protein	identified by match to protein family HMM PF03741	gene	gene2961	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_2999
BAA_3000	BAA_3000		BAA_3000	2711158	2713131	-	arylsulfatase	identified by match to protein family HMM PF00884	gene	gene2962	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3000
BAA_3001	BAA_3001		BAA_3001	2713648	2715273	-	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene2963	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3001
BAA_3002	BAA_3002		BAA_3002	2715651	2716499	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2964	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3002
BAA_3003	BAA_3003		BAA_3003	2716785	2717282	-		putative membrane protein%2C MmpL family%3B this region contains one or more premature stops and/or frameshifts	pseudogene	gene2965	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3003
BAA_3004	BAA_3004		BAA_3004	2717324	2717476	-		membrane protein%2C MmpL family%3B this region contains one or more premature stops and/or frameshifts	pseudogene	gene2966	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3004
BAA_3005	BAA_3005		BAA_3005	2717477	2719900	-		membrane protein%2C MmpL family%3B this region contains one or more premature stops and/or frameshifts%3B identified by match to protein family HMM PF03176	pseudogene	gene2967	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3005
BAA_3006	BAA_3006		BAA_3006	2720154	2720720	-	transcriptional regulator%2C TetR family	identified by match to protein family HMM PF00440	gene	gene2968	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3006
BAA_3007	BAA_3007		BAA_3007	2720990	2722147	-	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene2969	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3007
BAA_3008	BAA_3008	aroA	aroA	2722333	2723622	-	3-phosphoshikimate 1-carboxyvinyltransferase	identified by match to protein family HMM PF00275%3B match to protein family HMM TIGR01356	gene	gene2970	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3008
BAA_3009	BAA_3009	tyrA	tyrA	2723639	2724739	-	prephenate dehydrogenase	identified by match to protein family HMM PF01842%3B match to protein family HMM PF02153%3B match to protein family HMM PF03446	gene	gene2971	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3009
BAA_3010	BAA_3010	hisC2	hisC2	2724732	2725832	-	histidinol-phosphate transaminase	identified by match to protein family HMM PF00155%3B match to protein family HMM TIGR01141	gene	gene2972	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3010
BAA_3011	BAA_3011	aroC2	aroC2	2725851	2727023	-	chorismate synthase	identified by match to protein family HMM PF01264%3B match to protein family HMM TIGR00033	gene	gene2973	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3011
BAA_3012	BAA_3012		BAA_3012	2727308	2728384	-	chorismate mutase/phospho-2-dehydro-3-deoxyheptonate aldolase	identified by match to protein family HMM PF00793%3B match to protein family HMM PF01817%3B match to protein family HMM TIGR01361%3B match to protein family HMM TIGR01801	gene	gene2974	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3012
BAA_3013	BAA_3013		BAA_3013	2729216	2731765	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2975	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3013
BAA_3014	BAA_3014		BAA_3014	2731809	2732696	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2976	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3014
BAA_3015	BAA_3015		BAA_3015	2732876	2733313	+	conserved hypothetical protein		gene	gene2977	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3015
BAA_3016	BAA_3016		BAA_3016	2733462	2733992	-	isochorismatase family protein	identified by match to protein family HMM PF00857	gene	gene2978	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3016
BAA_3017	BAA_3017		BAA_3017	2734009	2734542	-	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene2979	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3017
BAA_3018	BAA_3018		BAA_3018	2734562	2734861	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2980	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3018
BAA_3019	BAA_3019		BAA_3019	2734963	2735478	+	conserved hypothetical protein		gene	gene2981	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3019
BAA_3020	BAA_3020		BAA_3020	2735530	2736852	-	conserved domain protein	identified by match to protein family HMM PF06347%3B match to protein family HMM PF06725%3B match to protein family HMM PF08239	gene	gene2982	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3020
BAA_3021	BAA_3021		BAA_3021	2737190	2738188	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2983	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3021
BAA_3022	BAA_3022		BAA_3022	2738178	2738756	-	RNA polymerase sigma-70 factor%2C ECF subfamily	identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937	gene	gene2984	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3022
BAA_3023	BAA_3023		BAA_3023	2738925	2739371	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2985	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3023
BAA_3024	BAA_3024		BAA_3024	2739496	2739843	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2986	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3024
BAA_3025	BAA_3025		BAA_3025	2739977	2741023	-	conserved hypothetical protein		gene	gene2987	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3025
BAA_3026	BAA_3026	mqo	mqo	2741405	2742907	+	malate:quinone-oxidoreductase	identified by match to protein family HMM PF06039%3B match to protein family HMM TIGR01320	gene	gene2988	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3026
BAA_3027	BAA_3027		BAA_3027	2742951	2743994	-	putative sugar ABC transporter%2C sugar-binding protein		gene	gene2989	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3027
BAA_3028	BAA_3028		BAA_3028	2743991	2745007	-	putative ribose ABC transporter%2C permease protein	identified by match to protein family HMM PF02653	gene	gene2990	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3028
BAA_3029	BAA_3029		BAA_3029	2744977	2745930	-	putative ribose ABC transporter%2C permease protein	identified by match to protein family HMM PF02653	gene	gene2992	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3029
BAA_3030	BAA_3030		BAA_3030	2744904	2745017	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2991	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3030
BAA_3031	BAA_3031		BAA_3031	2745927	2747417	-		putative ribose ABC transporter%2C ATP-binding protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00005	pseudogene	gene2993	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3031
BAA_3032	BAA_3032		BAA_3032	2747604	2748536	+	putative transcriptional regulator	identified by match to protein family HMM PF04198	gene	gene2994	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3032
BAA_3033	BAA_3033		BAA_3033	2748536	2749696	+		carbohydrate kinase%2C FGGY family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00370	pseudogene	gene2995	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3033
BAA_3034	BAA_3034		BAA_3034	2749857	2750099	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2996	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3034
BAA_3035	BAA_3035		BAA_3035	2750125	2750487	+	polyketide synthesis domain protein	identified by match to protein family HMM PF07883	gene	gene2997	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3035
BAA_3036	BAA_3036		BAA_3036	2750494	2751276	+	conserved hypothetical protein	identified by match to protein family HMM PF01791	gene	gene2998	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3036
BAA_3037	BAA_3037		BAA_3037	2751399	2751902	-	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene2999	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3037
BAA_3038	BAA_3038		BAA_3038	2752239	2752538	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene3000	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3038
BAA_3039	BAA_3039		BAA_3039	2752589	2752927	-		DNA polymerase beta domain protein region%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene3001	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3039
BAA_3040	BAA_3040		BAA_3040	2753010	2753594	-	putative lipoprotein		gene	gene3002	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3040
BAA_3041	BAA_3041		BAA_3041	2753691	2754017	-	conserved hypothetical protein	identified by match to protein family HMM PF03992	gene	gene3003	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3041
BAA_3042	BAA_3042		BAA_3042	2754114	2755328	-	putative permease	identified by match to protein family HMM PF07690	gene	gene3004	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3042
BAA_3043	BAA_3043		BAA_3043	2755386	2756429	-	transcriptional regulator%2C ArsR family	identified by match to protein family HMM PF01022	gene	gene3005	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3043
BAA_3044	BAA_3044		BAA_3044	2756718	2757206	+	conserved hypothetical protein		gene	gene3006	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3044
BAA_3045	BAA_3045		BAA_3045	2757410	2758603	+	nucleoside transporter%2C NupC family	identified by match to protein family HMM PF01773%3B match to protein family HMM PF07662%3B match to protein family HMM TIGR00804	gene	gene3007	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3045
BAA_3046	BAA_3046	proA	proA	2758653	2759897	-	gamma-glutamyl phosphate reductase	identified by match to protein family HMM TIGR00407	gene	gene3008	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3046
BAA_3047	BAA_3047	proB	proB	2759927	2761171	-	glutamate 5-kinase	identified by match to protein family HMM PF00696%3B match to protein family HMM PF01472%3B match to protein family HMM TIGR01027	gene	gene3009	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3047
BAA_3048	BAA_3048	proC1	proC1	2761729	2762547	+	pyrroline-5-carboxylate reductase	identified by match to protein family HMM PF01210%3B match to protein family HMM PF03807%3B match to protein family HMM TIGR00112	gene	gene3010	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3048
BAA_3049	BAA_3049	rocB	rocB	2762684	2764324	-	RocB protein	identified by match to protein family HMM PF01546	gene	gene3011	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3049
BAA_3050	BAA_3050		BAA_3050	2764400	2765149	-	transcriptional regulator%2C IclR family	identified by match to protein family HMM PF01614%3B match to protein family HMM PF09339	gene	gene3012	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3050
BAA_3051	BAA_3051		BAA_3051	2765417	2766841	+	amino acid permease family protein	identified by match to protein family HMM PF00324	gene	gene3013	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3051
BAA_3052	BAA_3052		BAA_3052	2766902	2768089	-	conserved hypothetical protein	identified by match to protein family HMM PF01139	gene	gene3014	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3052
BAA_3053	BAA_3053		BAA_3053	2768365	2769324	-		stearoyl-CoA 9-desaturase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00487	pseudogene	gene3015	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3053
BAA_3054	BAA_3054		BAA_3054	2769598	2771271	-	alkaline phosphatase	identified by match to protein family HMM PF00245	gene	gene3016	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3054
BAA_3055	BAA_3055		BAA_3055	2771556	2772038	+	conserved hypothetical protein		gene	gene3017	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3055
BAA_3056	BAA_3056		BAA_3056	2772049	2772264	+	DNA-binding protein		gene	gene3018	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3056
BAA_3057	BAA_3057		BAA_3057	2772305	2772616	-	conserved hypothetical protein		gene	gene3019	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3057
BAA_3058	BAA_3058		BAA_3058	2772723	2773109	-	putative lipoprotein		gene	gene3020	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3058
BAA_3059	BAA_3059		BAA_3059	2773106	2773789	-	CAAX amino terminal protease family protein		gene	gene3021	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3059
BAA_3060	BAA_3060		BAA_3060	2773879	2775195	-	histidine kinase domain protein		gene	gene3022	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3060
BAA_3061	BAA_3061		BAA_3061	2775195	2775929	-	response regulator	identified by match to protein family HMM PF04397	gene	gene3023	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3061
BAA_3062	BAA_3062		BAA_3062	2776092	2776673	-	conserved hypothetical protein		gene	gene3024	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3062
BAA_3063	BAA_3063		BAA_3063	2776673	2777215	-	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene3025	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3063
BAA_3064	BAA_3064		BAA_3064	2777230	2777613	-	glyoxalase family protein	identified by match to protein family HMM PF00903	gene	gene3026	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3064
BAA_3065	BAA_3065		BAA_3065	2777897	2778142	+	conserved hypothetical protein		gene	gene3027	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3065
BAA_3066	BAA_3066		BAA_3066	2778540	2779076	-	conserved hypothetical protein		gene	gene3028	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3066
BAA_3067	BAA_3067		BAA_3067	2779084	2779401	-	conserved hypothetical protein	identified by match to protein family HMM PF03551	gene	gene3029	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3067
BAA_3068	BAA_3068		BAA_3068	2779608	2780537	+	conserved hypothetical protein	identified by match to protein family HMM PF07726%3B match to protein family HMM PF07728	gene	gene3030	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3068
BAA_3069	BAA_3069		BAA_3069	2780534	2781697	+	conserved domain protein	identified by match to protein family HMM PF01882	gene	gene3031	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3069
BAA_3070	BAA_3070		BAA_3070	2781899	2782780	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene3032	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3070
BAA_3071	BAA_3071		BAA_3071	2782837	2784294	-	major facilitator family transporter	identified by match to protein family HMM PF00083%3B match to protein family HMM PF07690	gene	gene3033	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3071
BAA_3072	BAA_3072		BAA_3072	2785042	2786538	+	glycosyl transferase%2C group 2 family	identified by match to protein family HMM PF00535	gene	gene3034	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3072
BAA_3073	BAA_3073		BAA_3073	2786680	2786922	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3035	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3073
BAA_3074	BAA_3074		BAA_3074	2787538	2789076	-		glycosyl transferase%2C group 2 family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00535	pseudogene	gene3036	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3074
BAA_3075	BAA_3075		BAA_3075	2789091	2789918	-		glycosyl transferase%2C group 2 family%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene3037	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3075
BAA_3076	BAA_3076		BAA_3076	2789911	2791428	-	glycosyl transferase%2C group 2 family	identified by match to protein family HMM PF00535	gene	gene3038	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3076
BAA_3077	BAA_3077		BAA_3077	2791677	2791823	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene3039	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3077
BAA_3078	BAA_3078		BAA_3078	2791841	2792698	-		BNR repeat domain protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene3040	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3078
BAA_3079	BAA_3079		BAA_3079	2792996	2794213	-	putative succinylornithine transaminase	identified by match to protein family HMM PF00202	gene	gene3041	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3079
BAA_3080	BAA_3080		BAA_3080	2794485	2795864	+	catalase	identified by match to protein family HMM PF00199	gene	gene3042	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3080
BAA_3081	BAA_3081		BAA_3081	2795988	2796515	-	conserved domain protein		gene	gene3043	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3081
BAA_3082	BAA_3082		BAA_3082	2796629	2798383	-	putative adenine deaminase	identified by match to protein family HMM PF01979	gene	gene3044	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3082
BAA_3083	BAA_3083	adP2	adP2	2798753	2799919	-	alkaline D-peptidase	identified by match to protein family HMM PF00144	gene	gene3045	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3083
BAA_3084	BAA_3084		BAA_3084	2800178	2800684	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3046	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3084
BAA_3085	BAA_3085		BAA_3085	2800879	2801262	-		conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene3047	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3085
BAA_3086	BAA_3086		BAA_3086	2801284	2801610	-		group-specific protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene3048	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3086
BAA_3087	BAA_3087		BAA_3087	2801626	2802735	-	conserved domain protein	identified by match to protein family HMM PF01882	gene	gene3049	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3087
BAA_3088	BAA_3088		BAA_3088	2802732	2803664	-	ATPase%2C AAA family	identified by match to protein family HMM PF00004%3B match to protein family HMM PF07726%3B match to protein family HMM PF07728	gene	gene3050	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3088
BAA_3089	BAA_3089		BAA_3089	2803812	2804105	-	conserved hypothetical protein	identified by match to protein family HMM PF03992	gene	gene3051	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3089
BAA_3090	BAA_3090		BAA_3090	2804144	2804710	-	nitroreductase family protein	identified by match to protein family HMM PF00881	gene	gene3052	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3090
BAA_3091	BAA_3091		BAA_3091	2804729	2805157	-	transcriptional regulator%2C MarR family	identified by match to protein family HMM PF01047	gene	gene3053	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3091
BAA_3092	BAA_3092		BAA_3092	2805422	2807365	+	GTP-binding elongation factor protein%2C TetM/TetO family	identified by match to protein family HMM PF00009%3B match to protein family HMM PF00679%3B match to protein family HMM PF03144%3B match to protein family HMM PF03764%3B match to protein family HMM PF08477%3B match to protein family HMM TIGR00231	gene	gene3054	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3092
BAA_3093	BAA_3093		BAA_3093	2807412	2808056	-	conserved hypothetical protein		gene	gene3055	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3093
BAA_3094	BAA_3094		BAA_3094	2808078	2808545	-	MutT/NUDIX family protein	identified by match to protein family HMM PF00293	gene	gene3056	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3094
BAA_3095	BAA_3095		BAA_3095	2808590	2808706	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene3057	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3095
BAA_3096	BAA_3096		BAA_3096	2808700	2808831	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3058	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3096
BAA_3097	BAA_3097		BAA_3097	2808910	2809203	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3059	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3097
BAA_3098	BAA_3098		BAA_3098	2809233	2809850	-	conserved hypothetical protein		gene	gene3060	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3098
BAA_3099	BAA_3099		BAA_3099	2809838	2810710	-	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene3061	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3099
BAA_3100	BAA_3100		BAA_3100	2810698	2811087	-	transcriptional regulator%2C GntR family	identified by match to protein family HMM PF00392	gene	gene3062	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3100
BAA_3101	BAA_3101		BAA_3101	2811566	2812588	-	conserved domain protein	identified by match to protein family HMM PF01370	gene	gene3063	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3101
BAA_3102	BAA_3102		BAA_3102	2812774	2813445	-	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene3064	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3102
BAA_3103	BAA_3103		BAA_3103	2813445	2814707	-	ABC transporter%2C permease protein	identified by match to protein family HMM PF02687	gene	gene3065	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3103
BAA_3104	BAA_3104		BAA_3104	2814713	2815798	-	ABC transporter%2C permease protein	identified by match to protein family HMM PF02687	gene	gene3066	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3104
BAA_3105	BAA_3105		BAA_3105	2815864	2816232	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3067	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3105
BAA_3106	BAA_3106		BAA_3106	2816439	2817386	-	conserved hypothetical protein	identified by match to protein family HMM PF00144	gene	gene3068	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3106
BAA_3107	BAA_3107		BAA_3107	2817411	2818301	-	transcriptional regulator%2C AraC family	identified by match to protein family HMM PF00165%3B match to protein family HMM PF06445	gene	gene3069	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3107
BAA_3108	BAA_3108		BAA_3108	2818350	2818820	-	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene3070	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3108
BAA_3109	BAA_3109		BAA_3109	2818838	2819245	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3071	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3109
BAA_3110	BAA_3110		BAA_3110	2819342	2819809	+	MutT/NUDIX family protein	identified by match to protein family HMM PF00293	gene	gene3072	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3110
BAA_3111	BAA_3111		BAA_3111	2819828	2820739	-	transporter%2C EamA family	identified by match to protein family HMM PF00892	gene	gene3073	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3111
BAA_3112	BAA_3112		BAA_3112	2820865	2822307	+	transcriptional regulator%2C GntR family/aminotransferase%2C class I protein	identified by match to protein family HMM PF00155%3B match to protein family HMM PF00392	gene	gene3074	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3112
BAA_3113	BAA_3113		BAA_3113	2822389	2822829	+	yaiI/yqxD family protein	identified by match to protein family HMM PF02639	gene	gene3075	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3113
BAA_3114	BAA_3114		BAA_3114	2822906	2823220	-	conserved hypothetical protein		gene	gene3076	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3114
BAA_3115	BAA_3115		BAA_3115	2823439	2824311	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3077	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3115
BAA_3116	BAA_3116		BAA_3116	2824630	2825631	-	putative sensor histidine kinase	identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518	gene	gene3078	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3116
BAA_3117	BAA_3117		BAA_3117	2825628	2826299	-	DNA-binding response regulator	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486	gene	gene3079	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3117
BAA_3118	BAA_3118		BAA_3118	2826334	2827326	-	conserved hypothetical protein		gene	gene3080	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3118
BAA_3119	BAA_3119		BAA_3119	2827426	2828250	-	conserved hypothetical protein		gene	gene3081	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3119
BAA_3120	BAA_3120		BAA_3120	2828379	2829050	-	conserved hypothetical protein		gene	gene3082	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3120
BAA_3121	BAA_3121		BAA_3121	2829264	2830007	-	phosphatase family protein	identified by match to protein family HMM PF00149	gene	gene3083	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3121
BAA_3122	BAA_3122		BAA_3122	2830021	2830947	-	conserved hypothetical protein	identified by match to protein family HMM PF01636	gene	gene3084	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3122
BAA_3123	BAA_3123		BAA_3123	2830962	2831759	-	conserved domain protein		gene	gene3085	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3123
BAA_3124	BAA_3124		BAA_3124	2831966	2832868	+	putative membrane protein	identified by match to protein family HMM PF01925	gene	gene3086	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3124
BAA_3125	BAA_3125		BAA_3125	2832889	2833350	-	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene3087	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3125
BAA_3127	BAA_3127	lysP	lysP	2833978	2835444	+	lysine-specific permease	identified by match to protein family HMM PF00324	gene	gene3088	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3127
BAA_3128	BAA_3128		BAA_3128	2835558	2835863	+	conserved hypothetical protein		gene	gene3089	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3128
BAA_3129	BAA_3129		BAA_3129	2835897	2836667	+	conserved hypothetical protein		gene	gene3090	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3129
BAA_3130	BAA_3130		BAA_3130	2836732	2837223	-	conserved hypothetical protein		gene	gene3091	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3130
BAA_3131	BAA_3131		BAA_3131	2837418	2838179	+	conserved hypothetical protein	identified by match to protein family HMM PF08241	gene	gene3092	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3131
BAA_3132	BAA_3132		BAA_3132	2838233	2838415	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3093	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3132
BAA_3133	BAA_3133		BAA_3133	2838399	2838569	-	putative lipoprotein		gene	gene3094	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3133
BAA_3134	BAA_3134		BAA_3134	2838638	2839117	-		MutT/NUDIX family protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00293	pseudogene	gene3095	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3134
BAA_3135	BAA_3135		BAA_3135	2839362	2839994	+	conserved hypothetical protein	identified by match to protein family HMM PF04989	gene	gene3096	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3135
BAA_3136	BAA_3136	lepB_2	lepB_2	2840028	2840549	-	signal peptidase I	identified by match to protein family HMM PF00717%3B match to protein family HMM TIGR02227	gene	gene3097	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3136
BAA_3137	BAA_3137		BAA_3137	2840632	2840760	-		penicillin-binding protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene3098	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3137
BAA_3138	BAA_3138		BAA_3138	2840826	2842784	-		penicillin-binding Protein dimerisation domain family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00905%3B match to protein family HMM PF03717	pseudogene	gene3099	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3138
BAA_3139	BAA_3139		BAA_3139	2843074	2843655	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3100	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3139
BAA_3140	BAA_3140		BAA_3140	2843711	2844439	-	transcriptional regulator%2C Sir2 family	identified by match to protein family HMM PF02146	gene	gene3101	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3140
BAA_3141	BAA_3141	pcp	pcp	2844515	2845162	-	pyroglutamyl-peptidase I	identified by match to protein family HMM PF01470%3B match to protein family HMM TIGR00504	gene	gene3102	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3141
BAA_3142	BAA_3142		BAA_3142	2845410	2846486	-		transposase%2C IS605 family%2C OrfB%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM TIGR01766	pseudogene	gene3103	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3142
BAA_3143	BAA_3143		BAA_3143	2846618	2846956	-		transposase%2C IS605 family%2C OrfA%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM TIGR01765	pseudogene	gene3104	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3143
BAA_3144	BAA_3144		BAA_3144	2847077	2848039	-	putative membrane protein	identified by match to protein family HMM PF06166	gene	gene3105	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3144
BAA_3145	BAA_3145		BAA_3145	2848041	2848736	-	putative membrane protein	identified by match to protein family HMM PF06149	gene	gene3106	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3145
BAA_3146	BAA_3146		BAA_3146	2848760	2849521	-	conserved hypothetical protein	identified by match to protein family HMM PF03746	gene	gene3107	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3146
BAA_3147	BAA_3147		BAA_3147	2849566	2850528	-		urea amidolyase-related protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02626%3B match to protein family HMM TIGR00724	pseudogene	gene3108	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3147
BAA_3148	BAA_3148		BAA_3148	2850519	2851232	-	conserved hypothetical protein TIGR00370	identified by match to protein family HMM PF02682%3B match to protein family HMM TIGR00370	gene	gene3109	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3148
BAA_3149	BAA_3149		BAA_3149	2851247	2851999	-	transcriptional regulator%2C IclR family	identified by match to protein family HMM PF01614%3B match to protein family HMM PF09339	gene	gene3110	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3149
BAA_3150	BAA_3150	sipU	sipU	2852258	2852809	-	Signal peptidase I U	identified by match to protein family HMM PF00717%3B match to protein family HMM TIGR02227	gene	gene3111	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3150
BAA_3151	BAA_3151		BAA_3151	2852833	2853510	-	putative copper homeostasis protein CutC	identified by match to protein family HMM PF03932	gene	gene3112	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3151
BAA_3152	BAA_3152		BAA_3152	2853825	2854955	-	putative stage II sporulation protein P	identified by match to protein family HMM PF07454%3B match to protein family HMM TIGR02867	gene	gene3113	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3152
BAA_3153	BAA_3153		BAA_3153	2855159	2855863	-	transcriptional regulator%2C ArsR family	identified by match to protein family HMM PF01022	gene	gene3114	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3153
BAA_3154	BAA_3154		BAA_3154	2855933	2856403	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3115	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3154
BAA_3155	BAA_3155		BAA_3155	2856620	2857768	-	putative acyl-CoA dehydrogenase%2C short-chain specific	identified by match to protein family HMM PF00441%3B match to protein family HMM PF02770%3B match to protein family HMM PF08028	gene	gene3116	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3155
BAA_3156	BAA_3156		BAA_3156	2857921	2858553	-	conserved hypothetical protein	identified by match to protein family HMM PF02698	gene	gene3117	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3156
BAA_3157	BAA_3157		BAA_3157	2858884	2859471	-	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene3118	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3157
BAA_3158	BAA_3158		BAA_3158	2859801	2859998	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3119	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3158
BAA_3159	BAA_3159		BAA_3159	2860135	2861463	-	putative membrane protein	identified by match to protein family HMM PF07670	gene	gene3120	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3159
BAA_3160	BAA_3160		BAA_3160	2861577	2862455	-	aminoglycoside phosphotransferase family protein	identified by match to protein family HMM PF01636	gene	gene3121	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3160
BAA_3161	BAA_3161		BAA_3161	2862459	2862971	-	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene3122	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3161
BAA_3162	BAA_3162		BAA_3162	2863131	2863568	-	conserved hypothetical protein		gene	gene3123	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3162
BAA_3163	BAA_3163		BAA_3163	2863727	2864908	-	putative membrane protein	identified by match to protein family HMM PF01061	gene	gene3124	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3163
BAA_3164	BAA_3164		BAA_3164	2865080	2865697	+	transcriptional regulator%2C TetR family	identified by match to protein family HMM PF00440	gene	gene3125	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3164
BAA_3165	BAA_3165	ppsA	ppsA	2865757	2868363	-	pyruvate%2C water dikinase	identified by match to protein family HMM PF00391%3B match to protein family HMM PF01326	gene	gene3126	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3165
BAA_3166	BAA_3166		BAA_3166	2868746	2868865	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3127	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3166
BAA_3167	BAA_3167		BAA_3167	2868850	2869707	+	metallo-beta-lactamase family protein	identified by match to protein family HMM PF00753	gene	gene3128	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3167
BAA_3168	BAA_3168		BAA_3168	2870101	2870934	-	putative membrane protein	identified by match to protein family HMM PF09678	gene	gene3129	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3168
BAA_3169	BAA_3169		BAA_3169	2870924	2871430	-	conserved hypothetical protein		gene	gene3130	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3169
BAA_3170	BAA_3170	cotF	cotF	2871773	2872252	-	spore coat protein F	identified by match to protein family HMM PF07875	gene	gene3131	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3170
BAA_3171	BAA_3171		BAA_3171	2872770	2873528	+	conserved hypothetical protein	identified by match to protein family HMM PF08892	gene	gene3132	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3171
BAA_3172	BAA_3172		BAA_3172	2873620	2874246	+	putative membrane protein	identified by match to protein family HMM PF01810	gene	gene3133	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3172
BAA_3173	BAA_3173		BAA_3173	2874299	2874982	-		amino acid permease family protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene3134	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3173
BAA_3174	BAA_3174		BAA_3174	2875055	2875435	-		amino acid permease%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene3135	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3174
BAA_3175	BAA_3175		BAA_3175	2875656	2875808	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3136	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3175
BAA_3176	BAA_3176		BAA_3176	2876003	2876215	-	small%2C acid-soluble spore protein%2C alpha/beta family	identified by match to protein family HMM PF00269	gene	gene3137	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3176
BAA_3177	BAA_3177		BAA_3177	2876490	2876966	+	conserved hypothetical protein		gene	gene3138	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3177
BAA_3178	BAA_3178		BAA_3178	2877002	2877517	-	conserved hypothetical protein		gene	gene3139	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3178
BAA_3179	BAA_3179	sasP2	sasP2	2877812	2878024	-	small%2C acid-soluble spore protein	identified by match to protein family HMM PF00269	gene	gene3140	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3179
BAA_3180	BAA_3180		BAA_3180	2878272	2879405	+	oxidoreductase%2C zinc-binding dehydrogenase family	identified by match to protein family HMM PF00107%3B match to protein family HMM PF08240	gene	gene3141	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3180
BAA_3181	BAA_3181		BAA_3181	2879762	2880439	-	conserved hypothetical protein		gene	gene3142	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3181
BAA_3182	BAA_3182		BAA_3182	2880842	2881696	+	catalase%2C Mn-containing	identified by match to protein family HMM PF05067	gene	gene3143	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3182
BAA_3183	BAA_3183	aspA3	aspA3	2881840	2883270	-	aspartate ammonia-lyase	identified by match to protein family HMM PF00206%3B match to protein family HMM TIGR00839	gene	gene3144	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3183
BAA_3184	BAA_3184	ansA2	ansA2	2883324	2884328	-	L-asparaginase	identified by match to protein family HMM PF00710%3B match to protein family HMM TIGR00519	gene	gene3145	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3184
BAA_3185	BAA_3185	ansR	ansR	2884512	2884889	+	transcriptional regulator AnsR	identified by match to protein family HMM PF01381	gene	gene3146	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3185
BAA_3186	BAA_3186		BAA_3186	2885203	2885334	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3147	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3186
BAA_3187	BAA_3187		BAA_3187	2885433	2886074	-	conserved hypothetical protein	identified by match to protein family HMM PF01541	gene	gene3148	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3187
BAA_3188	BAA_3188		BAA_3188	2886241	2887656	-	amino acid permease family protein	identified by match to protein family HMM PF00324%3B match to protein family HMM PF03845	gene	gene3149	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3188
BAA_3189	BAA_3189	brnQ5	brnQ5	2887930	2889282	-	branched-chain amino acid transport system II carrier protein	identified by match to protein family HMM PF05525%3B match to protein family HMM TIGR00796	gene	gene3150	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3189
BAA_3190	BAA_3190	proC2	proC2	2889480	2890310	-	pyrroline-5-carboxylate reductase	identified by match to protein family HMM PF03807%3B match to protein family HMM TIGR00112	gene	gene3151	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3190
BAA_3191	BAA_3191		BAA_3191	2890626	2890976	-	conserved hypothetical protein		gene	gene3152	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3191
BAA_3192	BAA_3192		BAA_3192	2891141	2892385	-	putative malate dehydrogenase	identified by match to protein family HMM PF00390%3B match to protein family HMM PF03949	gene	gene3153	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3192
BAA_3193	BAA_3193		BAA_3193	2892493	2892636	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene3154	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3193
BAA_3194	BAA_3194		BAA_3194	2892696	2893484	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene3155	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3194
BAA_3195	BAA_3195		BAA_3195	2893837	2894298	-		spore germination protein BC%2C C-terminus%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF05504	pseudogene	gene3156	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3195
BAA_3196	BAA_3196		BAA_3196	2894262	2894900	-		spore germination protein BC%2C N-terminus%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene3157	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3196
BAA_3197	BAA_3197	gerAB	gerAB	2894897	2895439	-		spore germination protein GerAB%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF03845	pseudogene	gene3158	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3197
BAA_3198	BAA_3198		BAA_3198	2895466	2895654	-		spore germination protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene3159	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3198
BAA_3199	BAA_3199	gerAA	gerAA	2895843	2897156	-	spore germination protein GerAA	identified by match to protein family HMM PF03323	gene	gene3160	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3199
BAA_3200	BAA_3200		BAA_3200	2897291	2897416	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3161	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3200
BAA_3201	BAA_3201		BAA_3201	2897413	2897547	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3162	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3201
BAA_3202	BAA_3202		BAA_3202	2898092	2899036	-	response regulator	identified by match to protein family HMM PF00072%3B match to protein family HMM PF08664	gene	gene3163	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3202
BAA_3203	BAA_3203		BAA_3203	2899041	2899643	-		sensor histidine kinase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02518	pseudogene	gene3164	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3203
BAA_3204	BAA_3204		BAA_3204	2899697	2900227	-		sensor histidine kinase GlnK%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene3165	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3204
BAA_3205	BAA_3205	glsA2	glsA2	2900591	2901571	-	glutaminase A	identified by match to protein family HMM PF04960	gene	gene3166	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3205
BAA_3206	BAA_3206		BAA_3206	2901696	2902826	-		sodium/alanine symporter family protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01235%3B match to protein family HMM TIGR00835	pseudogene	gene3167	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3206
BAA_3207	BAA_3207		BAA_3207	2902804	2903121	-		amino acid carrier protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene3168	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3207
BAA_3208	BAA_3208		BAA_3208	2904262	2905413	+	putative transporter	identified by match to protein family HMM PF03600	gene	gene3169	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3208
BAA_3209	BAA_3209		BAA_3209	2905675	2906448	-	conserved domain protein		gene	gene3170	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3209
BAA_3210	BAA_3210		BAA_3210	2906576	2907103	+	conserved hypothetical protein		gene	gene3171	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3210
BAA_3211	BAA_3211		BAA_3211	2907127	2907900	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3172	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3211
BAA_3212	BAA_3212		BAA_3212	2908155	2908313	-		succinoglycan biosynthesis protein%3B this region contains one or more premature stops and/or frameshifts	pseudogene	gene3173	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3212
BAA_3213	BAA_3213		BAA_3213	2908534	2910123	-	putative 5'-nucleotidase	identified by match to protein family HMM PF00149%3B match to protein family HMM PF02872	gene	gene3174	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3213
BAA_3214	BAA_3214		BAA_3214	2910809	2912449	-	catalase	identified by match to protein family HMM PF00199	gene	gene3175	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3214
BAA_3215	BAA_3215		BAA_3215	2912563	2913399	-	bromoperoxidase	identified by match to protein family HMM PF00561	gene	gene3176	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3215
BAA_3216	BAA_3216		BAA_3216	2913892	2914536	+	isochorismatase family protein	identified by match to protein family HMM PF00857	gene	gene3177	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3216
BAA_3217	BAA_3217		BAA_3217	2914710	2915354	+	isochorismatase family protein	identified by match to protein family HMM PF00857	gene	gene3178	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3217
BAA_3218	BAA_3218		BAA_3218	2915351	2915944	+	conserved hypothetical protein		gene	gene3179	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3218
BAA_3219	BAA_3219		BAA_3219	2916330	2917793	+		amidohydrolase family protein%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF07969	pseudogene	gene3180	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3219
BAA_3220	BAA_3220		BAA_3220	2918074	2918952	-	transcriptional regulator%2C LysR family	identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466	gene	gene3181	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3220
BAA_3221	BAA_3221		BAA_3221	2919443	2919604	-		transcriptional regulator%2C MarR family%3B this region contains one or more premature stops and/or frameshifts	pseudogene	gene3182	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3221
BAA_3222	BAA_3222		BAA_3222	2920047	2920199	-		CorA-like Mg2+ transporter family protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene3183	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3222
BAA_3223	BAA_3223		BAA_3223	2920192	2920992	-		magnesium and cobalt transport protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01544	pseudogene	gene3184	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3223
BAA_3224	BAA_3224		BAA_3224	2921298	2922323	-	conserved hypothetical protein		gene	gene3185	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3224
BAA_3225	BAA_3225		BAA_3225	2922359	2922760	-	conserved hypothetical protein		gene	gene3186	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3225
BAA_3226	BAA_3226		BAA_3226	2922846	2923232	-	conserved hypothetical protein		gene	gene3187	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3226
BAA_3227	BAA_3227		BAA_3227	2923673	2924038	+	conserved hypothetical protein	identified by match to protein family HMM PF06486%3B match to protein family HMM TIGR01655	gene	gene3188	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3227
BAA_3228	BAA_3228		BAA_3228	2924077	2924787	-	conserved hypothetical protein		gene	gene3189	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3228
BAA_3229	BAA_3229		BAA_3229	2924891	2925346	-	TspO/MBR family protein	identified by match to protein family HMM PF03073	gene	gene3190	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3229
BAA_3230	BAA_3230		BAA_3230	2925459	2926889	-	deoxyribodipyrimidine photolyase family protein	identified by match to protein family HMM PF00875%3B match to protein family HMM PF03441	gene	gene3191	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3230
BAA_3231	BAA_3231		BAA_3231	2927054	2927566	-	conserved hypothetical protein	identified by match to protein family HMM PF00484	gene	gene3192	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3231
BAA_3232	BAA_3232		BAA_3232	2927647	2930271	-	conserved hypothetical protein		gene	gene3193	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3232
BAA_3233	BAA_3233		BAA_3233	2930271	2931803	-	NADH dehydrogenase (quinone) subunit	identified by match to protein family HMM PF00361	gene	gene3194	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3233
BAA_3234	BAA_3234		BAA_3234	2932446	2932808	-	conserved hypothetical protein		gene	gene3195	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3234
BAA_3235	BAA_3235		BAA_3235	2933363	2933917	+	putative streptothricin acetyltransferase	identified by match to protein family HMM PF00583	gene	gene3196	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3235
BAA_3236	BAA_3236	menA	menA	2934003	2934914	-	1%2C4-dihydroxy-2-naphthoate octaprenyltransferase	identified by match to protein family HMM PF01040%3B match to protein family HMM TIGR00751	gene	gene3197	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3236
BAA_3237	BAA_3237		BAA_3237	2935110	2935994	-	hydrolase%2C alpha/beta fold family	identified by match to protein family HMM PF00561	gene	gene3198	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3237
BAA_3238	BAA_3238	mntA	mntA	2936645	2937580	-	manganese ABC transporter%2C manganese-binding protein	identified by match to protein family HMM PF01297	gene	gene3199	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3238
BAA_3239	BAA_3239		BAA_3239	2937598	2938464	-	metal ABC transporter%2C permease protein	identified by match to protein family HMM PF00950	gene	gene3200	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3239
BAA_3240	BAA_3240		BAA_3240	2938461	2939210	-	metal ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene3201	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3240
BAA_3241	BAA_3241		BAA_3241	2939583	2940182	-	thiJ/pfpI family protein	identified by match to protein family HMM PF01965	gene	gene3202	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3241
BAA_3242	BAA_3242		BAA_3242	2940238	2941221	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3203	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3242
BAA_3243	BAA_3243		BAA_3243	2941369	2941851	+	putative lipoprotein		gene	gene3204	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3243
BAA_3244	BAA_3244		BAA_3244	2941942	2942772	-	acetyltransferase%2C GNAT family		gene	gene3205	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3244
BAA_3245	BAA_3245	arsC	arsC	2942926	2943330	-	arsenate reductase (thioredoxin)	identified by match to protein family HMM PF01451%3B match to protein family HMM TIGR02691	gene	gene3206	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3245
BAA_3246	BAA_3246	arsB	arsB	2943356	2944396	-	arsenical-resistance protein	identified by match to protein family HMM PF01758%3B match to protein family HMM TIGR00832	gene	gene3207	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3246
BAA_3247	BAA_3247		BAA_3247	2944415	2944852	-	glyoxalase family protein	identified by match to protein family HMM PF00903	gene	gene3208	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3247
BAA_3248	BAA_3248	arsR	arsR	2944912	2945217	-	arsenical resistance operon repressor	identified by match to protein family HMM PF01022	gene	gene3209	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3248
BAA_3249	BAA_3249		BAA_3249	2945664	2946341	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3210	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3249
BAA_3250	BAA_3250		BAA_3250	2946354	2947634	-	TPR domain protein	identified by match to protein family HMM PF00226%3B match to protein family HMM PF00515%3B match to protein family HMM PF07719	gene	gene3211	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3250
BAA_3251	BAA_3251	hscC	hscC	2947634	2949334	-	chaperone protein hscC	identified by match to protein family HMM PF00012	gene	gene3212	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3251
BAA_3252	BAA_3252		BAA_3252	2949842	2950117	-		conserved domain protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene3213	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3252
BAA_3253	BAA_3253		BAA_3253	2950422	2951186	-	oxidoreductase%2C short-chain dehydrogenase/reductase family	identified by match to protein family HMM PF00106%3B match to protein family HMM PF01370%3B match to protein family HMM PF08659	gene	gene3214	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3253
BAA_3254	BAA_3254		BAA_3254	2951354	2951794	+	transcriptional regulator%2C AsnC family	identified by match to protein family HMM PF01037	gene	gene3215	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3254
BAA_3255	BAA_3255		BAA_3255	2951861	2953066	-	amidohydrolase family protein	identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01891	gene	gene3216	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3255
BAA_3257	BAA_3257		BAA_3257	2953332	2955611	-	conserved domain protein		gene	gene3217	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3257
BAA_3258	BAA_3258		BAA_3258	2955753	2956145	+	glyoxylase family protein	identified by match to protein family HMM PF00903	gene	gene3218	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3258
BAA_3259	BAA_3259		BAA_3259	2956281	2956478	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3219	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3259
BAA_3260	BAA_3260		BAA_3260	2956489	2957010	-	conserved domain protein		gene	gene3220	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3260
BAA_3261	BAA_3261		BAA_3261	2957150	2957623	-	conserved hypothetical protein		gene	gene3221	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3261
BAA_3262	BAA_3262		BAA_3262	2957887	2958042	-		transcriptional regulator%2C AraC family%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene3222	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3262
BAA_3263	BAA_3263		BAA_3263	2958466	2959752	-	amino acid permease family protein	identified by match to protein family HMM PF00324%3B match to protein family HMM PF03845	gene	gene3223	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3263
BAA_3264	BAA_3264		BAA_3264	2960168	2962243	-	putative penicillin-binding protein	identified by match to protein family HMM PF00144	gene	gene3224	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3264
BAA_3265	BAA_3265		BAA_3265	2963066	2963224	+	conserved hypothetical protein		gene	gene3225	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3265
BAA_3266	BAA_3266		BAA_3266	2963672	2963977	-	conserved hypothetical protein	identified by match to protein family HMM PF08803	gene	gene3226	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3266
BAA_3267	BAA_3267		BAA_3267	2964195	2964545	-	conserved hypothetical protein	identified by match to protein family HMM PF07681	gene	gene3227	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3267
BAA_3268	BAA_3268		BAA_3268	2964870	2965289	-	transcriptional regulator%2C MarR family	identified by match to protein family HMM PF01047%3B match to protein family HMM PF03965	gene	gene3228	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3268
BAA_3269	BAA_3269	cypD	cypD	2965572	2968769	-	bifunctional P-450:NADPH-P450 reductase 1	identified by match to protein family HMM PF00067%3B match to protein family HMM PF00175%3B match to protein family HMM PF00258%3B match to protein family HMM PF00667	gene	gene3229	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3269
BAA_3270	BAA_3270		BAA_3270	2968810	2968980	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3230	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3270
BAA_3271	BAA_3271		BAA_3271	2969355	2970833	-	drug resistance transporter%2C EmrB/QacA family	identified by match to protein family HMM PF07690%3B match to protein family HMM TIGR00711	gene	gene3231	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3271
BAA_3272	BAA_3272		BAA_3272	2971258	2971860	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3232	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3272
BAA_3273	BAA_3273		BAA_3273	2972101	2972640	-	conserved hypothetical protein		gene	gene3233	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3273
BAA_3274	BAA_3274		BAA_3274	2972986	2973327	-	conserved domain protein		gene	gene3234	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3274
BAA_3275	BAA_3275		BAA_3275	2973330	2973800	-	putative lipoprotein		gene	gene3235	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3275
BAA_3276	BAA_3276		BAA_3276	2973976	2974650	+	DNA-binding response regulator	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486	gene	gene3236	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3276
BAA_3277	BAA_3277		BAA_3277	2974647	2976020	+	sensor histidine kinase	identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518	gene	gene3237	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3277
BAA_3278	BAA_3278		BAA_3278	2976303	2976518	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3238	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3278
BAA_3279	BAA_3279		BAA_3279	2976843	2978288	-	conserved hypothetical protein		gene	gene3239	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3279
BAA_3280	BAA_3280		BAA_3280	2979249	2979599	-	putative lipoprotein		gene	gene3240	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3280
BAA_3281	BAA_3281		BAA_3281	2979769	2980059	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3241	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3281
BAA_3282	BAA_3282		BAA_3282	2980228	2981223	-	putative pyridoxal phosphate-dependent deaminase	identified by match to protein family HMM PF00291%3B match to protein family HMM TIGR01275	gene	gene3242	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3282
BAA_3283	BAA_3283		BAA_3283	2981576	2982175	-		conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene3243	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3283
BAA_3284	BAA_3284		BAA_3284	2982230	2982808	-		phosphohydrolase%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene3244	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3284
BAA_3285	BAA_3285		BAA_3285	2983005	2983478	-		beta-lactamase family protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene3245	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3285
BAA_3286	BAA_3286		BAA_3286	2983472	2984329	-		beta-lactamase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00144	pseudogene	gene3246	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3286
BAA_3287	BAA_3287		BAA_3287	2984963	2985256	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3247	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3287
BAA_3288	BAA_3288		BAA_3288	2985262	2985459	-	DNA-binding protein	identified by match to protein family HMM PF01381	gene	gene3248	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3288
BAA_3289	BAA_3289		BAA_3289	2985800	2986945	-	conserved domain protein		gene	gene3249	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3289
BAA_3290	BAA_3290		BAA_3290	2986942	2988279	-	conserved hypothetical protein	identified by match to protein family HMM TIGR02304	gene	gene3250	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3290
BAA_3291	BAA_3291		BAA_3291	2988272	2989123	-	conserved hypothetical protein	identified by match to protein family HMM PF00753	gene	gene3251	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3291
BAA_3292	BAA_3292		BAA_3292	2989120	2990106	-	3-beta hydroxysteroid dehydrogenase/isomerase family protein	identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF04321%3B match to protein family HMM PF07993	gene	gene3252	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3292
BAA_3293	BAA_3293		BAA_3293	2990183	2991265	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02655	pseudogene	gene3253	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3293
BAA_3294	BAA_3294		BAA_3294	2991255	2992244	-	putative 3-oxoacyl-(acyl-carrier-protein) synthase III	identified by match to protein family HMM PF08541%3B match to protein family HMM PF08545	gene	gene3254	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3294
BAA_3295	BAA_3295		BAA_3295	2992676	2993590	-	conserved hypothetical protein	identified by match to protein family HMM PF02409%3B match to protein family HMM TIGR00027	gene	gene3255	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3295
BAA_3296	BAA_3296		BAA_3296	2993811	2994392	+	conserved hypothetical protein		gene	gene3256	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3296
BAA_3297	BAA_3297		BAA_3297	2994542	2995660	+	LPXTG-motif cell wall anchor domain protein	identified by match to protein family HMM PF00746%3B match to protein family HMM TIGR01167	gene	gene3257	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3297
BAA_3298	BAA_3298		BAA_3298	2995725	2996396	-	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene3258	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3298
BAA_3299	BAA_3299		BAA_3299	2996396	2997460	-	putative ABC transporter%2C permease protein	identified by match to protein family HMM PF02687	gene	gene3259	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3299
BAA_3300	BAA_3300		BAA_3300	2997645	2998268	+	transcriptional regulator%2C ArsR family	identified by match to protein family HMM PF01022	gene	gene3260	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3300
BAA_3301	BAA_3301		BAA_3301	2998338	2999597	+	putative permease	identified by match to protein family HMM PF07690	gene	gene3261	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3301
BAA_3302	BAA_3302		BAA_3302	2999784	3001160	-	sensor histidine kinase	identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518	gene	gene3262	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3302
BAA_3303	BAA_3303		BAA_3303	3001162	3001839	-	DNA-binding response regulator	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486	gene	gene3263	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3303
BAA_3304	BAA_3304		BAA_3304	3001920	3002585	-	putative membrane protein	identified by match to protein family HMM PF02588	gene	gene3264	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3304
BAA_3305	BAA_3305		BAA_3305	3002700	3003152	+	transcriptional regulator%2C MarR family	identified by match to protein family HMM PF01047	gene	gene3265	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3305
BAA_3306	BAA_3306		BAA_3306	3003178	3003612	+		protease synthase and sporulation negative regulatory protein PAI 1%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00583	pseudogene	gene3266	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3306
BAA_3307	BAA_3307		BAA_3307	3003570	3003695	+		protease synthase and sporulation negative regulatory protein PAI 1%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene3267	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3307
BAA_3308	BAA_3308	paiB1	paiB1	3003718	3004341	+	protease synthase and sporulation negative regulatory protein PAI 2	identified by match to protein family HMM PF04299	gene	gene3268	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3308
BAA_3309	BAA_3309		BAA_3309	3004538	3005377	-	putative membrane protein	identified by match to protein family HMM PF02588	gene	gene3269	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3309
BAA_3310	BAA_3310		BAA_3310	3005826	3007181	-	major facilitator family transporter	identified by match to protein family HMM PF00083%3B match to protein family HMM PF07690	gene	gene3270	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3310
BAA_3311	BAA_3311		BAA_3311	3007219	3007911	-	conserved hypothetical protein	identified by match to protein family HMM PF02589	gene	gene3271	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3311
BAA_3312	BAA_3312		BAA_3312	3007913	3009325	-	iron-sulfur cluster-binding protein	identified by match to protein family HMM PF02589%3B match to protein family HMM TIGR00273	gene	gene3272	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3312
BAA_3313	BAA_3313		BAA_3313	3009322	3010050	-	conserved hypothetical protein	identified by match to protein family HMM PF02754	gene	gene3273	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3313
BAA_3314	BAA_3314		BAA_3314	3010233	3011105	+	transcriptional regulator%2C LysR family	identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466	gene	gene3274	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3314
BAA_3315	BAA_3315		BAA_3315	3011318	3011959	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3275	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3315
BAA_3316	BAA_3316		BAA_3316	3012248	3013279	+	conserved hypothetical protein	identified by match to protein family HMM PF02016	gene	gene3276	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3316
BAA_3317	BAA_3317		BAA_3317	3013917	3014168	-		conserved domain protein%3B this region contains one or more premature stops and/or frameshifts	pseudogene	gene3277	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3317
BAA_3318	BAA_3318		BAA_3318	3014172	3014357	-		conserved hypothetical protein%3B this region contains one or more premature stops and/or frameshifts	pseudogene	gene3278	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3318
BAA_3319	BAA_3319		BAA_3319	3015441	3016643	-	putative membrane protein	identified by match to protein family HMM PF07690	gene	gene3279	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3319
BAA_3320	BAA_3320		BAA_3320	3016718	3017767	-	oxidoreductase%2C Gfo/Idh/MocA family	identified by match to protein family HMM PF01408%3B match to protein family HMM PF02894	gene	gene3280	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3320
BAA_3321	BAA_3321		BAA_3321	3017785	3018645	-	conserved hypothetical protein	identified by match to protein family HMM PF05116%3B match to protein family HMM PF08282%3B match to protein family HMM TIGR01484	gene	gene3281	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3321
BAA_3322	BAA_3322		BAA_3322	3018632	3019033	-		degT/dnrJ/eryC1/strS family protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene3282	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3322
BAA_3323	BAA_3323		BAA_3323	3019081	3019956	-		DegT/DnrJ/EryC1/StrS aminotransferase family%2C N-terminus%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01041%3B match to protein family HMM PF01212	pseudogene	gene3283	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3323
BAA_3324	BAA_3324		BAA_3324	3020055	3021044	+	sugar-binding transcriptional regulator%2C LacI family	identified by match to protein family HMM PF00356%3B match to protein family HMM PF00532	gene	gene3284	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3324
BAA_3325	BAA_3325		BAA_3325	3021281	3022396	+	TPR domain protein		gene	gene3285	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3325
BAA_3326	BAA_3326		BAA_3326	3022396	3022557	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3286	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3326
BAA_3327	BAA_3327		BAA_3327	3024199	3024747	-	conserved domain protein		gene	gene3287	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3327
BAA_3328	BAA_3328		BAA_3328	3025073	3025300	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3288	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3328
BAA_3329	BAA_3329		BAA_3329	3025633	3026898	+	impB/mucB/samB family protein	identified by match to protein family HMM PF00817	gene	gene3289	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3329
BAA_3330	BAA_3330		BAA_3330	3026895	3027236	+	conserved hypothetical protein	identified by match to protein family HMM PF08863	gene	gene3290	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3330
BAA_3331	BAA_3331		BAA_3331	3027280	3027654	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3291	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3331
BAA_3332	BAA_3332		BAA_3332	3027750	3029732	-	methyl-accepting chemotaxis protein	identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672%3B match to protein family HMM PF02203%3B match to protein family HMM PF02743	gene	gene3292	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3332
BAA_3333	BAA_3333		BAA_3333	3030445	3030558	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3293	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3333
BAA_3334	BAA_3334		BAA_3334	3030776	3031693	+	CAAX amino terminal protease family protein	identified by match to protein family HMM PF02517	gene	gene3294	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3334
BAA_3335	BAA_3335		BAA_3335	3032080	3032526	+	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene3295	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3335
BAA_3336	BAA_3336		BAA_3336	3032839	3034248	-	MATE efflux family protein	identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797	gene	gene3296	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3336
BAA_3337	BAA_3337		BAA_3337	3035435	3035557	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3297	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3337
BAA_3338	BAA_3338		BAA_3338	3035828	3038710	-	putative microbial collagenase	identified by match to protein family HMM PF00801%3B match to protein family HMM PF01752%3B match to protein family HMM PF04151%3B match to protein family HMM PF08453	gene	gene3298	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3338
BAA_3339	BAA_3339		BAA_3339	3039126	3039416	-		cell filamentation protein%3B this region contains one or more premature stops and/or frameshifts	pseudogene	gene3299	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3339
BAA_3340	BAA_3340		BAA_3340	3039629	3040798	-	putative transporter	identified by match to protein family HMM PF07690	gene	gene3300	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3340
BAA_3341	BAA_3341		BAA_3341	3041151	3041744	+	transcriptional regulator%2C TetR family	identified by match to protein family HMM PF00440	gene	gene3301	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3341
BAA_3342	BAA_3342		BAA_3342	3042423	3042722	-	transcriptional regulator%2C ArsR family	identified by match to protein family HMM PF01022	gene	gene3302	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3342
BAA_3343	BAA_3343		BAA_3343	3043077	3044396	-	serine/threonine transporter family protein	identified by match to protein family HMM PF01490%3B match to protein family HMM PF03222	gene	gene3303	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3343
BAA_3344	BAA_3344	sdaAA1	sdaAA1	3044690	3045580	-	L-serine dehydratase%2C iron-sulfur-dependent%2C alpha subunit	identified by match to protein family HMM PF03313%3B match to protein family HMM TIGR00718	gene	gene3304	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3344
BAA_3345	BAA_3345	sdaAB1	sdaAB1	3045603	3046301	-	L-serine dehydratase%2C iron-sulfur-dependent%2C beta subunit	identified by match to protein family HMM PF03315%3B match to protein family HMM TIGR00719	gene	gene3305	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3345
BAA_3346	BAA_3346		BAA_3346	3047306	3047449	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3306	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3346
BAA_3347	BAA_3347		BAA_3347	3047531	3048805	-	diaminobutyrate-2-oxoglutarate transaminase	identified by match to protein family HMM PF00202%3B match to protein family HMM TIGR00709%3B match to protein family HMM TIGR02407	gene	gene3307	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3347
BAA_3348	BAA_3348	hypF	hypF	3048884	3051214	-	(NiFe) hydrogenase maturation protein HypF	identified by match to protein family HMM PF00708%3B match to protein family HMM PF01300%3B match to protein family HMM PF07503%3B match to protein family HMM TIGR00143	gene	gene3308	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3348
BAA_3349	BAA_3349		BAA_3349	3051225	3052253	-	hydrogenase expression/formation protein HypE	identified by match to protein family HMM PF00586%3B match to protein family HMM PF02769%3B match to protein family HMM TIGR02124	gene	gene3309	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3349
BAA_3350	BAA_3350		BAA_3350	3052336	3052917	-	isochorismatase family protein	identified by match to protein family HMM PF00857	gene	gene3310	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3350
BAA_3351	BAA_3351		BAA_3351	3053121	3053561	-	transcriptional regulator%2C AsnC family	identified by match to protein family HMM PF01037	gene	gene3311	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3351
BAA_3352	BAA_3352		BAA_3352	3053712	3055007	+	amino acid permease family protein	identified by match to protein family HMM PF00324%3B match to protein family HMM PF01490%3B match to protein family HMM PF03845	gene	gene3312	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3352
BAA_3353	BAA_3353		BAA_3353	3056156	3056665	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3313	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3353
BAA_3354	BAA_3354		BAA_3354	3056809	3058056	-	conserved hypothetical protein	identified by match to protein family HMM PF06245	gene	gene3314	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3354
BAA_3355	BAA_3355		BAA_3355	3058070	3059242	-	putative D-3-phosphoglycerate dehydrogenase	identified by match to protein family HMM PF00389%3B match to protein family HMM PF01842%3B match to protein family HMM PF02826	gene	gene3315	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3355
BAA_3356	BAA_3356	serC	serC	3059255	3060340	-	phosphoserine transaminase	identified by match to protein family HMM PF00266%3B match to protein family HMM TIGR01364	gene	gene3316	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3356
BAA_3357	BAA_3357		BAA_3357	3060626	3060880	-	conserved domain protein		gene	gene3317	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3357
BAA_3358	BAA_3358		BAA_3358	3060918	3061940	-	conserved hypothetical protein		gene	gene3318	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3358
BAA_3359	BAA_3359		BAA_3359	3061930	3062430	-	RNA polymerase sigma-70 factor%2C ECF subfamily	identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937%3B match to protein family HMM TIGR02950	gene	gene3319	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3359
BAA_3360	BAA_3360		BAA_3360	3062736	3062927	-	conserved hypothetical protein		gene	gene3320	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3360
BAA_3361	BAA_3361		BAA_3361	3063017	3064084	-	conserved hypothetical protein		gene	gene3321	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3361
BAA_3362	BAA_3362		BAA_3362	3064265	3064516	-	cupin domain protein	identified by match to protein family HMM PF07883	gene	gene3322	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3362
BAA_3363	BAA_3363		BAA_3363	3064798	3065625	-	transcriptional regulator%2C AraC family	identified by match to protein family HMM PF00165	gene	gene3323	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3363
BAA_3364	BAA_3364		BAA_3364	3065946	3066065	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3324	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3364
BAA_3365	BAA_3365		BAA_3365	3066179	3068569	-	beta-lactam antibiotic acylase family protein	identified by match to protein family HMM PF01804	gene	gene3325	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3365
BAA_3366	BAA_3366		BAA_3366	3068649	3069389	-	DnaD domain protein	identified by match to protein family HMM PF04271%3B match to protein family HMM TIGR01446	gene	gene3326	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3366
BAA_3367	BAA_3367		BAA_3367	3069680	3070696	-		N-acetylmuramoyl-L-alanine amidase%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF00395%3B match to protein family HMM PF08239	pseudogene	gene3327	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3367
BAA_3368	BAA_3368		BAA_3368	3070907	3071455	-		N-acetylmuramoyl-L-alanine amidase and S-layer protein fusion%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene3328	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3368
BAA_3369	BAA_3369		BAA_3369	3071854	3072561	+	conserved hypothetical protein	identified by match to protein family HMM PF06352	gene	gene3329	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3369
BAA_3370	BAA_3370		BAA_3370	3072639	3072971	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3330	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3370
BAA_3371	BAA_3371		BAA_3371	3073415	3074497	+	putative S-layer protein	identified by match to protein family HMM PF00395	gene	gene3331	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3371
BAA_3372	BAA_3372		BAA_3372	3074629	3075087	-	glyoxalase family protein	identified by match to protein family HMM PF00903	gene	gene3332	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3372
BAA_3373	BAA_3373		BAA_3373	3075344	3075754	+	conserved hypothetical protein		gene	gene3333	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3373
BAA_3374	BAA_3374		BAA_3374	3075854	3076054	-	conserved hypothetical protein		gene	gene3334	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3374
BAA_3375	BAA_3375		BAA_3375	3076038	3077234	-	major facilitator family transporter	identified by match to protein family HMM PF07690	gene	gene3335	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3375
BAA_3376	BAA_3376		BAA_3376	3077375	3078277	-	hydrolase%2C alpha/beta fold family	identified by match to protein family HMM PF00561	gene	gene3336	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3376
BAA_3377	BAA_3377		BAA_3377	3078467	3078883	+	transcriptional regulator%2C MarR family	identified by match to protein family HMM PF01047	gene	gene3337	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3377
BAA_3378	BAA_3378		BAA_3378	3078899	3080098	+	major facilitator family transporter	identified by match to protein family HMM PF07690	gene	gene3338	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3378
BAA_3379	BAA_3379		BAA_3379	3080199	3081458	+	putative 6-aminohexanoate-dimer hydrolase	identified by match to protein family HMM PF00144	gene	gene3339	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3379
BAA_3380	BAA_3380		BAA_3380	3081575	3081700	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3340	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3380
BAA_3381	BAA_3381		BAA_3381	3081881	3082669	-	putative membrane protein		gene	gene3341	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3381
BAA_3382	BAA_3382		BAA_3382	3082662	3083570	-	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene3342	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3382
BAA_3383	BAA_3383		BAA_3383	3083567	3083806	-	conserved hypothetical protein		gene	gene3343	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3383
BAA_3384	BAA_3384		BAA_3384	3083806	3083919	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3344	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3384
BAA_3385	BAA_3385		BAA_3385	3083929	3084474	+	conserved hypothetical protein		gene	gene3345	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3385
BAA_3386	BAA_3386		BAA_3386	3084674	3085063	-	conserved hypothetical protein		gene	gene3346	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3386
BAA_3387	BAA_3387		BAA_3387	3085060	3085422	-	multidrug resistance protein%2C Smr family	identified by match to protein family HMM PF00893	gene	gene3347	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3387
BAA_3388	BAA_3388		BAA_3388	3085437	3085994	-	transcriptional regulator%2C TetR family	identified by match to protein family HMM PF00440	gene	gene3348	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3388
BAA_3389	BAA_3389	alo	alo	3086326	3087864	-	anthrolysin O	identified by match to protein family HMM PF01289	gene	gene3349	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3389
BAA_3390	BAA_3390		BAA_3390	3088271	3089617	+	putative membrane protein	identified by match to protein family HMM PF02667	gene	gene3350	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3390
BAA_3391	BAA_3391		BAA_3391	3089658	3090011	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3351	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3391
BAA_3392	BAA_3392		BAA_3392	3090008	3090583	-	NAD(P)H dehydrogenase%2C quinone family	identified by match to protein family HMM PF02525%3B match to protein family HMM PF03358	gene	gene3352	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3392
BAA_3393	BAA_3393		BAA_3393	3090607	3090996	-	conserved hypothetical protein	identified by match to protein family HMM PF04434	gene	gene3353	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3393
BAA_3394	BAA_3394		BAA_3394	3091248	3091505	-	conserved hypothetical protein		gene	gene3354	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3394
BAA_3396	BAA_3396		BAA_3396	3091829	3092020	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3355	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3396
BAA_3397	BAA_3397		BAA_3397	3092053	3092775	-	putative membrane protein		gene	gene3356	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3397
BAA_3398	BAA_3398		BAA_3398	3092959	3093567	-	putative membrane protein		gene	gene3357	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3398
BAA_3399	BAA_3399		BAA_3399	3093633	3095288	-	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene3358	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3399
BAA_3400	BAA_3400		BAA_3400	3095267	3096145	-	ABC transporter%2C permease protein	identified by match to protein family HMM PF02361	gene	gene3359	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3400
BAA_3401	BAA_3401		BAA_3401	3096168	3097004	-	putative lipoprotein		gene	gene3360	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3401
BAA_3402	BAA_3402		BAA_3402	3097061	3098848	-	LPXTG-motif cell wall anchor domain protein	identified by match to protein family HMM TIGR01167	gene	gene3361	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3402
BAA_3403	BAA_3403		BAA_3403	3099187	3099666	-	conserved hypothetical protein	identified by match to protein family HMM PF03737%3B match to protein family HMM TIGR01935	gene	gene3362	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3403
BAA_3404	BAA_3404		BAA_3404	3099867	3101297	+	putative transporter	identified by match to protein family HMM PF03553%3B match to protein family HMM PF03606	gene	gene3363	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3404
BAA_3405	BAA_3405		BAA_3405	3101445	3102272	-	ribonuclease	identified by match to protein family HMM PF04231	gene	gene3364	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3405
BAA_3406	BAA_3406		BAA_3406	3102700	3103056	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3365	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3406
BAA_3407	BAA_3407		BAA_3407	3103258	3104286	-	conserved hypothetical protein		gene	gene3366	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3407
BAA_3408	BAA_3408		BAA_3408	3104297	3105421	-	DNA-binding protein	identified by match to protein family HMM PF01381	gene	gene3367	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3408
BAA_3409	BAA_3409		BAA_3409	3105762	3106334	-	putative membrane protein	identified by match to protein family HMM PF02660%3B match to protein family HMM TIGR00023	gene	gene3368	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3409
BAA_3410	BAA_3410		BAA_3410	3106954	3107430	-	ybaK/ebsC family protein	identified by match to protein family HMM PF04073%3B match to protein family HMM TIGR00011	gene	gene3369	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3410
BAA_3411	BAA_3411	hisS1	hisS1	3107767	3109047	+	histidine--tRNA ligase	identified by match to protein family HMM PF00587%3B match to protein family HMM PF03129%3B match to protein family HMM TIGR00442	gene	gene3370	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3411
BAA_3412	BAA_3412		BAA_3412	3109374	3109520	+	putative membrane protein		gene	gene3371	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3412
BAA_3413	BAA_3413		BAA_3413	3109786	3110385	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3372	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3413
BAA_3414	BAA_3414		BAA_3414	3110444	3110824	-	conserved hypothetical protein	identified by match to protein family HMM PF01638	gene	gene3373	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3414
BAA_3415	BAA_3415		BAA_3415	3110953	3111636	+	nitroreductase family protein	identified by match to protein family HMM PF00881	gene	gene3374	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3415
BAA_3416	BAA_3416		BAA_3416	3111790	3112065	+	conserved hypothetical protein		gene	gene3375	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3416
BAA_3417	BAA_3417	pykA1	pykA1	3112112	3113170	-	pyruvate kinase	identified by match to protein family HMM PF00224%3B match to protein family HMM TIGR01064	gene	gene3376	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3417
BAA_3418	BAA_3418		BAA_3418	3113263	3113973	-	putative lipoprotein		gene	gene3377	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3418
BAA_3419	BAA_3419		BAA_3419	3114311	3115069	-	oxidoreductase%2C short-chain dehydrogenase/reductase family	identified by match to protein family HMM PF00106	gene	gene3378	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3419
BAA_3420	BAA_3420		BAA_3420	3115126	3116784	-	conserved hypothetical protein		gene	gene3379	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3420
BAA_3421	BAA_3421		BAA_3421	3116777	3117502	-	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene3380	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3421
BAA_3422	BAA_3422		BAA_3422	3117589	3117783	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3381	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3422
BAA_3423	BAA_3423		BAA_3423	3117963	3118322	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3382	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3423
BAA_3424	BAA_3424		BAA_3424	3118310	3118513	+	DNA-binding protein	identified by match to protein family HMM PF01381	gene	gene3383	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3424
BAA_3425	BAA_3425		BAA_3425	3118569	3119531	-	conserved domain protein		gene	gene3384	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3425
BAA_3426	BAA_3426		BAA_3426	3119705	3120415	-	hydrolase%2C haloacid dehalogenase-like family	identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01549%3B match to protein family HMM TIGR02254	gene	gene3385	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3426
BAA_3427	BAA_3427		BAA_3427	3120755	3121180	+	conserved domain protein	identified by match to protein family HMM PF07853	gene	gene3386	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3427
BAA_3428	BAA_3428		BAA_3428	3121275	3122297	-	protein-tyrosine phosphatase-like protein		gene	gene3387	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3428
BAA_3429	BAA_3429		BAA_3429	3122477	3123199	-	acetyltransferase%2C GNAT family		gene	gene3388	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3429
BAA_3430	BAA_3430		BAA_3430	3123323	3124162	+	conserved hypothetical protein		gene	gene3389	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3430
BAA_3431	BAA_3431		BAA_3431	3124180	3124506	+		MutT/NUDIX family protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00293	pseudogene	gene3390	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3431
BAA_3432	BAA_3432		BAA_3432	3124750	3124905	-	conserved hypothetical protein		gene	gene3391	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3432
BAA_3433	BAA_3433		BAA_3433	3125100	3125480	-	glyoxylase family protein	identified by match to protein family HMM PF00903	gene	gene3392	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3433
BAA_3434	BAA_3434		BAA_3434	3125542	3126570	-	ROK family protein	identified by match to protein family HMM PF00480	gene	gene3393	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3434
BAA_3435	BAA_3435		BAA_3435	3126693	3127886	-	putative membrane protein	identified by match to protein family HMM PF07690	gene	gene3394	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3435
BAA_3436	BAA_3436	maa	maa	3127943	3128506	-	maltose O-acetyltransferase	identified by match to protein family HMM PF00132	gene	gene3395	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3436
BAA_3437	BAA_3437		BAA_3437	3128813	3129214	-		ABC transporter%2C permease protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02687	pseudogene	gene3396	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3437
BAA_3438	BAA_3438		BAA_3438	3129246	3131300	-		abc transporter%2C permease protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02687	pseudogene	gene3397	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3438
BAA_3439	BAA_3439		BAA_3439	3131297	3132055	-	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene3398	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3439
BAA_3440	BAA_3440		BAA_3440	3132048	3132197	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3399	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3440
BAA_3441	BAA_3441		BAA_3441	3132274	3133272	-	putative tryptophanyl-tRNA synthetase	identified by match to protein family HMM PF00579%3B match to protein family HMM TIGR00233	gene	gene3400	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3441
BAA_3442	BAA_3442	dxr1	dxr1	3133663	3134820	+	1-deoxy-D-xylulose 5-phosphate reductoisomerase	identified by match to protein family HMM PF02670%3B match to protein family HMM PF08436%3B match to protein family HMM TIGR00243	gene	gene3401	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3442
BAA_3443	BAA_3443		BAA_3443	3134850	3135971	-	putative membrane protein	identified by match to protein family HMM PF01594	gene	gene3402	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3443
BAA_3444	BAA_3444		BAA_3444	3136035	3136283	-	conserved hypothetical protein	identified by match to protein family HMM PF04226	gene	gene3403	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3444
BAA_3445	BAA_3445		BAA_3445	3136420	3136881	+	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene3404	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3445
BAA_3447	BAA_3447		BAA_3447	3137159	3137302	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3405	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3447
BAA_3448	BAA_3448		BAA_3448	3137358	3138113	-	conserved hypothetical protein	identified by match to protein family HMM PF08241%3B match to protein family HMM PF08242	gene	gene3406	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3448
BAA_3449	BAA_3449		BAA_3449	3138154	3138696	-	conserved hypothetical protein	identified by match to protein family HMM PF07336	gene	gene3407	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3449
BAA_3450	BAA_3450		BAA_3450	3138809	3139990	+	putative membrane protein	identified by match to protein family HMM PF07690	gene	gene3408	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3450
BAA_3451	BAA_3451		BAA_3451	3140047	3140961	-	TPR domain protein	identified by match to protein family HMM PF00515	gene	gene3409	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3451
BAA_3452	BAA_3452		BAA_3452	3141229	3141624	+	putative lipoprotein		gene	gene3410	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3452
BAA_3453	BAA_3453		BAA_3453	3141701	3141940	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3411	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3453
BAA_3454	BAA_3454		BAA_3454	3142016	3142564	-	conserved hypothetical protein		gene	gene3412	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3454
BAA_3455	BAA_3455		BAA_3455	3142764	3143177	-	putative ATP synthase protein I		gene	gene3413	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3455
BAA_3456	BAA_3456		BAA_3456	3143230	3144558	-	CBS domain protein	identified by match to protein family HMM PF00571%3B match to protein family HMM PF01595%3B match to protein family HMM PF03471	gene	gene3414	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3456
BAA_3457	BAA_3457		BAA_3457	3144678	3145085	-	putative transcriptional regulator	identified by match to protein family HMM PF00376	gene	gene3415	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3457
BAA_3458	BAA_3458		BAA_3458	3145533	3146417	+	transporter%2C EamA family	identified by match to protein family HMM PF00892	gene	gene3416	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3458
BAA_3459	BAA_3459		BAA_3459	3146463	3147284	-	pentapeptide repeats domain protein	identified by match to protein family HMM PF00805	gene	gene3417	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3459
BAA_3460	BAA_3460		BAA_3460	3147480	3147656	+	conserved hypothetical protein	identified by match to protein family HMM PF06906	gene	gene3418	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3460
BAA_3461	BAA_3461		BAA_3461	3147836	3148903	-	conserved hypothetical protein		gene	gene3419	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3461
BAA_3462	BAA_3462	gntK	gntK	3149025	3150566	-	gluconokinase	identified by match to protein family HMM PF00370%3B match to protein family HMM PF02782%3B match to protein family HMM TIGR01314	gene	gene3420	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3462
BAA_3463	BAA_3463	gntP2	gntP2	3150622	3151947	-	gluconate permease	identified by match to protein family HMM PF02447%3B match to protein family HMM PF03600%3B match to protein family HMM TIGR00791	gene	gene3421	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3463
BAA_3464	BAA_3464		BAA_3464	3152337	3153005	-	putative transaldolase	identified by match to protein family HMM PF00923%3B match to protein family HMM TIGR00875	gene	gene3422	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3464
BAA_3465	BAA_3465	gnd	gnd	3153057	3153950	-	6-phosphogluconate dehydrogenase (decarboxylating)	identified by match to protein family HMM PF00393%3B match to protein family HMM PF03446%3B match to protein family HMM PF03807%3B match to protein family HMM TIGR00872	gene	gene3423	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3465
BAA_3466	BAA_3466	tkt1	tkt1	3154055	3156079	-	transketolase	identified by match to protein family HMM PF00456%3B match to protein family HMM PF02779%3B match to protein family HMM PF02780%3B match to protein family HMM TIGR00232	gene	gene3424	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3466
BAA_3467	BAA_3467	zwf	zwf	3156119	3157603	-	glucose-6-phosphate dehydrogenase	identified by match to protein family HMM PF00479%3B match to protein family HMM PF02781%3B match to protein family HMM TIGR00871	gene	gene3425	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3467
BAA_3468	BAA_3468		BAA_3468	3157954	3158502	-	glucose-6-phosphate dehydrogenase domain protein	identified by match to protein family HMM PF00479	gene	gene3426	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3468
BAA_3469	BAA_3469		BAA_3469	3158592	3159545	-	alcohol dehydrogenase%2C zinc-containing	identified by match to protein family HMM PF00107%3B match to protein family HMM PF08240	gene	gene3427	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3469
BAA_3470	BAA_3470		BAA_3470	3159559	3160521	-	bacterial luciferase family protein	identified by match to protein family HMM PF00296%3B match to protein family HMM TIGR03571	gene	gene3428	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3470
BAA_3471	BAA_3471		BAA_3471	3160647	3160826	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3429	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3471
BAA_3472	BAA_3472		BAA_3472	3160932	3161939	+	oxidoreductase%2C zinc-binding dehydrogenase family	identified by match to protein family HMM PF00107%3B match to protein family HMM PF08240	gene	gene3430	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3472
BAA_3473	BAA_3473		BAA_3473	3162199	3162993	-	oxidoreductase%2C short chain dehydrogenase/reductase family	identified by match to protein family HMM PF00106	gene	gene3431	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3473
BAA_3474	BAA_3474		BAA_3474	3163581	3165278	-	bacillolysin	identified by match to protein family HMM PF01447%3B match to protein family HMM PF02868%3B match to protein family HMM PF07504	gene	gene3432	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3474
BAA_3475	BAA_3475		BAA_3475	3165434	3167662	-	metallprotease%2C enhancin family	identified by match to protein family HMM PF03272	gene	gene3433	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3475
BAA_3476	BAA_3476		BAA_3476	3168005	3168604	-	conserved hypothetical protein		gene	gene3434	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3476
BAA_3477	BAA_3477		BAA_3477	3168987	3170060	-	BNR repeat domain protein	identified by match to protein family HMM PF02012	gene	gene3435	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3477
BAA_3478	BAA_3478		BAA_3478	3170472	3171311	-	oxidoreductase%2C aldo/keto reductase family	identified by match to protein family HMM PF00248	gene	gene3436	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3478
BAA_3479	BAA_3479		BAA_3479	3171328	3172542	-	major facilitator family transporter	identified by match to protein family HMM PF00083%3B match to protein family HMM PF07690	gene	gene3437	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3479
BAA_3480	BAA_3480		BAA_3480	3173121	3173594	-	4-oxalocrotonate tautomerase family protein	identified by match to protein family HMM PF01361	gene	gene3438	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3480
BAA_3481	BAA_3481		BAA_3481	3173637	3174113	-	conserved hypothetical protein	identified by match to protein family HMM PF03928	gene	gene3439	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3481
BAA_3482	BAA_3482		BAA_3482	3174666	3175148	+	glyoxalase family protein	identified by match to protein family HMM PF00903	gene	gene3440	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3482
BAA_3483	BAA_3483		BAA_3483	3175308	3176627	-	serine/threonine transporter family protein	identified by match to protein family HMM PF01490%3B match to protein family HMM PF03222	gene	gene3441	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3483
BAA_3484	BAA_3484		BAA_3484	3177780	3178112	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3442	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3484
BAA_3485	BAA_3485		BAA_3485	3178243	3178656	-	rrf2 family protein	identified by match to protein family HMM PF02082	gene	gene3443	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3485
BAA_3486	BAA_3486		BAA_3486	3178820	3178954	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3444	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3486
BAA_3487	BAA_3487		BAA_3487	3179030	3179197	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3445	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3487
BAA_3488	BAA_3488		BAA_3488	3179245	3179640	-	conserved hypothetical protein	identified by match to protein family HMM PF03960%3B match to protein family HMM TIGR01617	gene	gene3446	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3488
BAA_3489	BAA_3489		BAA_3489	3180241	3180585	+	conserved hypothetical protein	identified by match to protein family HMM PF01638	gene	gene3447	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3489
BAA_3490	BAA_3490		BAA_3490	3180650	3181387	-	transcriptional regulator%2C GntR family	identified by match to protein family HMM PF00392%3B match to protein family HMM PF07702	gene	gene3448	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3490
BAA_3491	BAA_3491		BAA_3491	3181420	3182124	-		oxidoreductase%2C Gfo/Idh/MocA family%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF02894	pseudogene	gene3449	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3491
BAA_3492	BAA_3492		BAA_3492	3182143	3182481	-		putative oxidoreductase YhhX%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF01408	pseudogene	gene3450	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3492
BAA_3493	BAA_3493	cfa	cfa	3182699	3183871	-	cyclopropane-fatty-acyl-phospholipid synthase	identified by match to protein family HMM PF02353%3B match to protein family HMM PF08241%3B match to protein family HMM PF08242	gene	gene3451	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3493
BAA_3494	BAA_3494		BAA_3494	3184194	3184520	-	conserved hypothetical protein	identified by match to protein family HMM PF01638	gene	gene3452	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3494
BAA_3495	BAA_3495		BAA_3495	3184710	3185051	-	conserved hypothetical protein	identified by match to protein family HMM PF01638	gene	gene3453	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3495
BAA_3496	BAA_3496		BAA_3496	3185483	3186493	+	oxidoreductase%2C aldo/keto reductase family	identified by match to protein family HMM PF00248	gene	gene3454	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3496
BAA_3497	BAA_3497		BAA_3497	3186572	3186988	+	conserved hypothetical protein		gene	gene3455	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3497
BAA_3498	BAA_3498		BAA_3498	3187214	3188038	-	metallo-beta-lactamase family protein	identified by match to protein family HMM PF00753	gene	gene3456	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3498
BAA_3499	BAA_3499		BAA_3499	3188067	3188624	-	conserved hypothetical protein		gene	gene3457	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3499
BAA_3500	BAA_3500		BAA_3500	3188652	3189500	-	aminoglycoside phophotransferase-related protein		gene	gene3458	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3500
BAA_3501	BAA_3501		BAA_3501	3189676	3189885	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3459	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3501
BAA_3502	BAA_3502		BAA_3502	3189999	3190898	-	phenazine biosynthesis protein%2C PhzF family	identified by match to protein family HMM PF02567%3B match to protein family HMM TIGR00654	gene	gene3460	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3502
BAA_3503	BAA_3503		BAA_3503	3190910	3191686	-	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene3461	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3503
BAA_3504	BAA_3504		BAA_3504	3191683	3192387	-	oxidoreductase%2C short chain dehydrogenase/reductase family	identified by match to protein family HMM PF00106	gene	gene3462	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3504
BAA_3505	BAA_3505		BAA_3505	3192384	3192947	-	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene3463	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3505
BAA_3506	BAA_3506		BAA_3506	3193093	3194595	-	AMP-binding protein	identified by match to protein family HMM PF00501	gene	gene3464	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3506
BAA_3507	BAA_3507		BAA_3507	3194730	3194975	-		NAD(P)H dehydrogenase%2C quinone family%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene3465	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3507
BAA_3508	BAA_3508		BAA_3508	3195011	3195265	-		general stress protein 14%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02525	pseudogene	gene3466	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3508
BAA_3509	BAA_3509		BAA_3509	3195387	3195710	+	conserved hypothetical protein	identified by match to protein family HMM PF01638	gene	gene3467	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3509
BAA_3510	BAA_3510		BAA_3510	3195904	3196461	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene3468	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3510
BAA_3511	BAA_3511		BAA_3511	3196449	3196688	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene3469	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3511
BAA_3512	BAA_3512		BAA_3512	3197175	3198245	+	ankyrin repeat domain protein	identified by match to protein family HMM PF00023	gene	gene3470	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3512
BAA_3513	BAA_3513		BAA_3513	3198405	3198680	-	transcriptional regulator%2C ArsR family	identified by match to protein family HMM PF01022	gene	gene3471	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3513
BAA_3514	BAA_3514		BAA_3514	3198909	3201692	-		polysaccharide deacetylase/glycosyl transferase%2C group 2 family protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00535%3B match to protein family HMM PF01522	pseudogene	gene3472	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3514
BAA_3515	BAA_3515		BAA_3515	3201739	3202260	-		glycosyl transferase and polysaccharide deacetylase fusion%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene3473	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3515
BAA_3516	BAA_3516		BAA_3516	3202438	3203760	-	conserved hypothetical protein		gene	gene3474	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3516
BAA_3517	BAA_3517	sigI	sigI	3203753	3204460	-	RNA polymerase sigma-I factor	identified by match to protein family HMM PF04542%3B match to protein family HMM TIGR02895%3B match to protein family HMM TIGR02937	gene	gene3475	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3517
BAA_3518	BAA_3518		BAA_3518	3205030	3205167	-		glycosyl transferase%2C group 2 family%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene3476	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3518
BAA_3519	BAA_3519		BAA_3519	3205210	3205791	-		glycosyl transferase%2C group 2 family%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF00535	pseudogene	gene3477	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3519
BAA_3520	BAA_3520		BAA_3520	3206134	3206787	-	CAAX amino terminal protease family protein	identified by match to protein family HMM PF02517	gene	gene3478	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3520
BAA_3521	BAA_3521		BAA_3521	3207404	3207994	+	transcriptional regulator%2C TetR family	identified by match to protein family HMM PF00440	gene	gene3479	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3521
BAA_3522	BAA_3522		BAA_3522	3208268	3208525	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3480	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3522
BAA_3523	BAA_3523		BAA_3523	3208672	3209157	-	conserved domain protein	identified by match to protein family HMM PF06445	gene	gene3481	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3523
BAA_3524	BAA_3524		BAA_3524	3209262	3209921	+		transcriptional regulator%2C DeoR family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF08220%3B match to protein family HMM PF08279	pseudogene	gene3482	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3524
BAA_3525	BAA_3525		BAA_3525	3210361	3210753	-	conserved hypothetical protein	identified by match to protein family HMM PF05656	gene	gene3483	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3525
BAA_3526	BAA_3526		BAA_3526	3211022	3211771	-	ABC transporter%2C efflux permease protein	identified by match to protein family HMM PF01061	gene	gene3484	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3526
BAA_3527	BAA_3527		BAA_3527	3211772	3212533	-	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene3485	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3527
BAA_3528	BAA_3528		BAA_3528	3212688	3213029	-	conserved hypothetical protein	identified by match to protein family HMM PF06304	gene	gene3486	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3528
BAA_3529	BAA_3529		BAA_3529	3213105	3213425	-	conserved hypothetical protein	identified by match to protein family HMM PF03551	gene	gene3487	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3529
BAA_3530	BAA_3530		BAA_3530	3213848	3215158	-	prismane protein	identified by match to protein family HMM PF03063%3B match to protein family HMM TIGR01703	gene	gene3488	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3530
BAA_3531	BAA_3531		BAA_3531	3215394	3216425	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3489	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3531
BAA_3532	BAA_3532	bla2	bla2	3216859	3217629	-	beta-lactamase II	identified by match to protein family HMM PF00753	gene	gene3490	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3532
BAA_3533	BAA_3533		BAA_3533	3217768	3218505	-	putative lysozyme	identified by match to protein family HMM PF01183	gene	gene3491	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3533
BAA_3534	BAA_3534		BAA_3534	3218540	3218821	-	conserved hypothetical protein	identified by match to protein family HMM PF03819	gene	gene3492	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3534
BAA_3535	BAA_3535		BAA_3535	3218938	3219228	+	conserved hypothetical protein		gene	gene3493	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3535
BAA_3536	BAA_3536		BAA_3536	3219259	3219540	-	conserved hypothetical protein		gene	gene3494	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3536
BAA_3537	BAA_3537		BAA_3537	3219673	3219867	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3495	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3537
BAA_3538	BAA_3538		BAA_3538	3219978	3221015	+	putative penicillin-binding protein	identified by match to protein family HMM PF00144	gene	gene3496	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3538
BAA_3539	BAA_3539		BAA_3539	3221052	3221300	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3497	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3539
BAA_3540	BAA_3540		BAA_3540	3221578	3222621	-	conserved hypothetical protein	identified by match to protein family HMM PF03486	gene	gene3498	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3540
BAA_3541	BAA_3541		BAA_3541	3222793	3223146	-	conserved hypothetical protein		gene	gene3499	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3541
BAA_3542	BAA_3542		BAA_3542	3223160	3223852	-	cyclic nucleotide-binding domain protein	identified by match to protein family HMM PF00027	gene	gene3500	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3542
BAA_3543	BAA_3543		BAA_3543	3223962	3224408	+	putative membrane protein	identified by match to protein family HMM PF04657	gene	gene3501	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3543
BAA_3544	BAA_3544		BAA_3544	3224422	3224886	+	putative membrane protein	identified by match to protein family HMM PF04657	gene	gene3502	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3544
BAA_3545	BAA_3545		BAA_3545	3224991	3225470	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3503	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3545
BAA_3546	BAA_3546		BAA_3546	3225511	3226263	-	metallo-beta-lactamase family protein	identified by match to protein family HMM PF00753	gene	gene3504	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3546
BAA_3547	BAA_3547		BAA_3547	3226451	3227023	+		alcohol dehydrogenase%2C zinc-containing%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF08240	pseudogene	gene3505	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3547
BAA_3548	BAA_3548		BAA_3548	3227219	3227470	+		adh_zinc%2C Zinc-binding dehydrogenase%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene3506	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3548
BAA_3549	BAA_3549		BAA_3549	3227519	3228910	-	amino acid permease family protein	identified by match to protein family HMM PF00324	gene	gene3507	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3549
BAA_3550	BAA_3550		BAA_3550	3229540	3230739	-	drug resistance transporter%2C Bcr/CflA family	identified by match to protein family HMM PF07690%3B match to protein family HMM TIGR00710	gene	gene3508	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3550
BAA_3551	BAA_3551		BAA_3551	3231106	3231672	+	conserved hypothetical protein		gene	gene3509	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3551
BAA_3552	BAA_3552		BAA_3552	3231716	3231940	-	conserved hypothetical protein		gene	gene3510	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3552
BAA_3553	BAA_3553		BAA_3553	3232051	3232203	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3511	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3553
BAA_3554	BAA_3554		BAA_3554	3232261	3232539	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3512	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3554
BAA_3555	BAA_3555		BAA_3555	3233170	3233550	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3513	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3555
BAA_3556	BAA_3556		BAA_3556	3233929	3234591	-	conserved hypothetical protein	identified by match to protein family HMM PF02585	gene	gene3514	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3556
BAA_3557	BAA_3557		BAA_3557	3234607	3234957	-	conserved hypothetical protein	identified by match to protein family HMM PF08830	gene	gene3515	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3557
BAA_3558	BAA_3558		BAA_3558	3235220	3236545	+	arsenical pump family protein	identified by match to protein family HMM PF00939%3B match to protein family HMM PF02040%3B match to protein family HMM PF03600	gene	gene3516	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3558
BAA_3559	BAA_3559		BAA_3559	3236617	3236844	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3517	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3559
BAA_3560	BAA_3560		BAA_3560	3237706	3237843	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3518	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3560
BAA_3561	BAA_3561		BAA_3561	3237994	3238347	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3519	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3561
BAA_3562	BAA_3562		BAA_3562	3238724	3239269	-	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene3520	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3562
BAA_3563	BAA_3563		BAA_3563	3239488	3240267	-		putative iron compound ABC transporter%2C iron compound-binding protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01497	pseudogene	gene3521	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3563
BAA_3564	BAA_3564		BAA_3564	3240252	3240386	-		iron compound ABC transporter%2C substrate-binding protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene3522	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3564
BAA_3565	BAA_3565		BAA_3565	3240408	3241424	-	iron compound ABC transporter%2C permease protein	identified by match to protein family HMM PF01032	gene	gene3523	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3565
BAA_3566	BAA_3566		BAA_3566	3241425	3242459	-	iron compound ABC transporter%2C permease protein	identified by match to protein family HMM PF01032	gene	gene3524	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3566
BAA_3567	BAA_3567		BAA_3567	3242730	3243494	+	putative membrane protein	identified by match to protein family HMM PF05675	gene	gene3525	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3567
BAA_3568	BAA_3568		BAA_3568	3243772	3244629	-	phenazine biosynthesis protein%2C PhzF family	identified by match to protein family HMM PF02567%3B match to protein family HMM TIGR00654	gene	gene3526	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3568
BAA_3569	BAA_3569		BAA_3569	3244878	3245864	-	conserved hypothetical protein		gene	gene3527	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3569
BAA_3570	BAA_3570		BAA_3570	3246135	3246590	-	conserved hypothetical protein		gene	gene3528	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3570
BAA_3571	BAA_3571		BAA_3571	3246786	3247277	+	conserved hypothetical protein	identified by match to protein family HMM PF05163	gene	gene3529	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3571
BAA_3572	BAA_3572		BAA_3572	3247375	3247851	-	conserved hypothetical protein		gene	gene3530	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3572
BAA_3573	BAA_3573		BAA_3573	3247869	3248381	-	conserved domain protein		gene	gene3531	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3573
BAA_3574	BAA_3574		BAA_3574	3248683	3249576	-	transcriptional regulator%2C LysR family	identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466	gene	gene3532	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3574
BAA_3575	BAA_3575		BAA_3575	3249700	3250665	+	oxidoreductase%2C zinc-binding dehydrogenase family	identified by match to protein family HMM PF00107%3B match to protein family HMM PF08240	gene	gene3533	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3575
BAA_3576	BAA_3576		BAA_3576	3250731	3251435	-	putative phosphoglycerate mutase	identified by match to protein family HMM PF00300	gene	gene3534	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3576
BAA_3577	BAA_3577		BAA_3577	3251598	3252122	-	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene3535	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3577
BAA_3578	BAA_3578		BAA_3578	3252129	3254030	-	putative MutS family protein	identified by match to protein family HMM PF00488	gene	gene3536	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3578
BAA_3579	BAA_3579		BAA_3579	3254429	3254548	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3537	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3579
BAA_3580	BAA_3580		BAA_3580	3254643	3255272	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3538	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3580
BAA_3581	BAA_3581	amyS	amyS	3255367	3256908	-	alpha-amylase	identified by match to protein family HMM PF00128	gene	gene3539	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3581
BAA_3582	BAA_3582		BAA_3582	3257124	3257777	+		N-acetyltransferase family protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00797	pseudogene	gene3540	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3582
BAA_3583	BAA_3583	pepF2	pepF2	3258031	3259818	+	oligoendopeptidase F	identified by match to protein family HMM PF01432%3B match to protein family HMM PF08439%3B match to protein family HMM TIGR00181	gene	gene3541	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3583
BAA_3584	BAA_3584		BAA_3584	3259854	3260987	-	putative penicillin-binding protein	identified by match to protein family HMM PF00144	gene	gene3542	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3584
BAA_3585	BAA_3585		BAA_3585	3261244	3261474	+	conserved hypothetical protein		gene	gene3543	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3585
BAA_3586	BAA_3586		BAA_3586	3261574	3262818	-	major facilitator family transporter	identified by match to protein family HMM PF07690	gene	gene3544	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3586
BAA_3587	BAA_3587		BAA_3587	3262904	3263755	+	transcriptional regulator%2C LysR family	identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466	gene	gene3545	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3587
BAA_3588	BAA_3588		BAA_3588	3263748	3264257	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3546	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3588
BAA_3589	BAA_3589		BAA_3589	3264351	3265028	+	conserved domain protein	identified by match to protein family HMM PF02698	gene	gene3547	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3589
BAA_3590	BAA_3590		BAA_3590	3265078	3266022	-	putative glycerophosphoryl diester phosphodiesterase	identified by match to protein family HMM PF03009	gene	gene3548	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3590
BAA_3591	BAA_3591		BAA_3591	3266761	3267351	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene3549	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3591
BAA_3592	BAA_3592		BAA_3592	3267326	3267979	-	putative membrane protein		gene	gene3550	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3592
BAA_3593	BAA_3593		BAA_3593	3268595	3270214	-	FAD-binding monooxygenase%2C PheA/TfdB family	identified by match to protein family HMM PF01266%3B match to protein family HMM PF01494	gene	gene3551	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3593
BAA_3594	BAA_3594		BAA_3594	3270692	3271036	+	transcriptional regulator%2C ArsR family	identified by match to protein family HMM PF01022	gene	gene3552	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3594
BAA_3595	BAA_3595		BAA_3595	3271055	3272053	+	oxidoreductase%2C zinc-binding dehydrogenase family	identified by match to protein family HMM PF00107%3B match to protein family HMM PF08240	gene	gene3553	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3595
BAA_3596	BAA_3596		BAA_3596	3272232	3273698	+	conserved hypothetical protein	identified by match to protein family HMM PF02696	gene	gene3554	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3596
BAA_3597	BAA_3597		BAA_3597	3273954	3274628	+		putative response regulator%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene3555	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3597
BAA_3598	BAA_3598		BAA_3598	3274704	3275048	+		tetratricopeptide domain protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene3556	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3598
BAA_3599	BAA_3599		BAA_3599	3275045	3275236	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3557	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3599
BAA_3600	BAA_3600	paiB2	paiB2	3275310	3275909	-	protease synthase and sporulation negative regulatory protein PAI 2	identified by match to protein family HMM PF04299	gene	gene3558	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3600
BAA_3601	BAA_3601		BAA_3601	3276044	3276571	-	conserved hypothetical protein	identified by match to protein family HMM PF04229	gene	gene3559	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3601
BAA_3602	BAA_3602		BAA_3602	3276595	3276942	-	conserved hypothetical protein		gene	gene3560	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3602
BAA_3603	BAA_3603		BAA_3603	3276955	3277923	-	bile acid transporter family protein	identified by match to protein family HMM PF01758	gene	gene3561	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3603
BAA_3604	BAA_3604		BAA_3604	3277928	3279319	-	putative glycolate oxidase%2C subunit GlcD	identified by match to protein family HMM PF01565%3B match to protein family HMM PF02913	gene	gene3562	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3604
BAA_3605	BAA_3605		BAA_3605	3279489	3279887	-	conserved hypothetical protein		gene	gene3563	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3605
BAA_3606	BAA_3606		BAA_3606	3280235	3281047	-		glycosyl transferase%2C group 1 family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00534	pseudogene	gene3564	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3606
BAA_3607	BAA_3607		BAA_3607	3281275	3282615	-	putative methyltransferase	identified by match to protein family HMM TIGR01444	gene	gene3565	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3607
BAA_3608	BAA_3608		BAA_3608	3283059	3283625	-	putative O-acetyltransferase	identified by match to protein family HMM PF00132	gene	gene3566	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3608
BAA_3609	BAA_3609		BAA_3609	3283618	3284748	-	degT/dnrJ/eryC1/strS family protein	identified by match to protein family HMM PF01041	gene	gene3567	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3609
BAA_3610	BAA_3610		BAA_3610	3284768	3287323	-	glycosyl transferase%2C group 2 family	identified by match to protein family HMM PF00535%3B match to protein family HMM PF08241	gene	gene3568	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3610
BAA_3611	BAA_3611		BAA_3611	3287477	3288268	-	enoyl-CoA hydratase/isomerase family protein	identified by match to protein family HMM PF00378	gene	gene3569	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3611
BAA_3612	BAA_3612		BAA_3612	3288607	3291522	-	putative microbial collagenase	identified by match to protein family HMM PF00801%3B match to protein family HMM PF01752%3B match to protein family HMM PF04151%3B match to protein family HMM PF08453	gene	gene3570	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3612
BAA_3613	BAA_3613		BAA_3613	3291726	3292403	-	mgtC family protein	identified by match to protein family HMM PF02308	gene	gene3572	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3613
BAA_3614	BAA_3614		BAA_3614	3291620	3291745	+	conserved hypothetical protein		gene	gene3571	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3614
BAA_3615	BAA_3615		BAA_3615	3292696	3293214	+	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene3573	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3615
BAA_3616	BAA_3616		BAA_3616	3293510	3294439	-	glyoxalase family protein	identified by match to protein family HMM PF00903	gene	gene3574	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3616
BAA_3617	BAA_3617		BAA_3617	3294614	3295525	-	putative lipoprotein	identified by match to protein family HMM PF04294	gene	gene3575	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3617
BAA_3618	BAA_3618		BAA_3618	3295904	3296230	+	conserved hypothetical protein		gene	gene3576	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3618
BAA_3619	BAA_3619		BAA_3619	3296347	3297438	+	conserved hypothetical protein		gene	gene3577	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3619
BAA_3620	BAA_3620		BAA_3620	3297749	3298096	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3578	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3620
BAA_3621	BAA_3621		BAA_3621	3298128	3298289	-	conserved hypothetical protein		gene	gene3579	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3621
BAA_3622	BAA_3622		BAA_3622	3298438	3299283	-	exonuclease family protein	identified by match to protein family HMM PF00929	gene	gene3580	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3622
BAA_3623	BAA_3623	cspB2	cspB2	3299473	3299673	-	cold shock protein CspB	identified by match to protein family HMM PF00313	gene	gene3581	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3623
BAA_3624	BAA_3624		BAA_3624	3299890	3300789	-	BNR repeat domain protein		gene	gene3582	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3624
BAA_3625	BAA_3625		BAA_3625	3300806	3301249	-	flavodoxin	identified by match to protein family HMM PF00258%3B match to protein family HMM TIGR01753	gene	gene3583	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3625
BAA_3626	BAA_3626		BAA_3626	3301391	3302011	-	putative membrane protein		gene	gene3584	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3626
BAA_3627	BAA_3627		BAA_3627	3302097	3302492	-	MutT/NUDIX family protein	identified by match to protein family HMM PF00293	gene	gene3585	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3627
BAA_3628	BAA_3628		BAA_3628	3302489	3302830	-	conserved hypothetical protein	identified by match to protein family HMM PF04266	gene	gene3586	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3628
BAA_3629	BAA_3629		BAA_3629	3302941	3303498	+	acetyltransferase%2C CYSE/LACA/LPXA/NODL family		gene	gene3587	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3629
BAA_3630	BAA_3630		BAA_3630	3303546	3310622	-	conserved repeat domain protein	identified by match to protein family HMM PF01345%3B match to protein family HMM TIGR01451	gene	gene3588	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3630
BAA_3631	BAA_3631		BAA_3631	3310739	3311488	+	oxidoreductase%2C short-chain dehydrogenase/reductase family	identified by match to protein family HMM PF00106	gene	gene3589	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3631
BAA_3632	BAA_3632		BAA_3632	3311524	3312357	-	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene3590	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3632
BAA_3633	BAA_3633	argH1	argH1	3312424	3313932	-	argininosuccinate lyase	identified by match to protein family HMM PF00206%3B match to protein family HMM TIGR00838	gene	gene3591	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3633
BAA_3634	BAA_3634		BAA_3634	3314034	3315143	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3592	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3634
BAA_3635	BAA_3635		BAA_3635	3315260	3316201	-	inosine-uridine preferring nucleoside hydrolase family protein	identified by match to protein family HMM PF01156	gene	gene3593	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3635
BAA_3636	BAA_3636		BAA_3636	3316309	3317748	-	putative sodium/pantothenate symporter	identified by match to protein family HMM PF00474%3B match to protein family HMM TIGR00813%3B match to protein family HMM TIGR02119	gene	gene3594	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3636
BAA_3637	BAA_3637		BAA_3637	3317752	3318030	-	conserved hypothetical protein	identified by match to protein family HMM PF06196	gene	gene3595	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3637
BAA_3638	BAA_3638	dhaS	dhaS	3318304	3319788	+	aldehyde dehydrogenase (NAD)	identified by match to protein family HMM PF00171	gene	gene3596	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3638
BAA_3639	BAA_3639		BAA_3639	3319839	3320579	-	putative 3-oxoacyl-(acyl-carrier-protein) reductase	identified by match to protein family HMM PF00106%3B match to protein family HMM PF08659	gene	gene3597	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3639
BAA_3640	BAA_3640		BAA_3640	3320706	3320861	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3598	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3640
BAA_3641	BAA_3641		BAA_3641	3320933	3322786	-	putative squalene-hopene cyclase	identified by match to protein family HMM PF00432%3B match to protein family HMM TIGR01787	gene	gene3599	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3641
BAA_3642	BAA_3642		BAA_3642	3322886	3323311	-	conserved hypothetical protein	identified by match to protein family HMM PF02681	gene	gene3600	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3642
BAA_3643	BAA_3643		BAA_3643	3323391	3324332	-	rarD protein	identified by match to protein family HMM PF00892%3B match to protein family HMM TIGR00688	gene	gene3601	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3643
BAA_3644	BAA_3644		BAA_3644	3324423	3324671	-	putative membrane protein	identified by match to protein family HMM PF06961	gene	gene3602	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3644
BAA_3645	BAA_3645		BAA_3645	3324840	3325238	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3603	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3645
BAA_3646	BAA_3646		BAA_3646	3325281	3325505	-	conserved domain protein		gene	gene3604	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3646
BAA_3647	BAA_3647		BAA_3647	3325521	3326570	-	mrp protein	identified by match to protein family HMM PF01883	gene	gene3605	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3647
BAA_3648	BAA_3648	moaD2	moaD2	3326637	3326873	-	molybdopterin converting factor%2C subunit 1	identified by match to protein family HMM PF02597%3B match to protein family HMM TIGR01682	gene	gene3606	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3648
BAA_3649	BAA_3649	moaE2	moaE2	3326878	3327342	-	molybdopterin converting factor%2C subunit 2	identified by match to protein family HMM PF02391	gene	gene3607	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3649
BAA_3650	BAA_3650	moeA2	moeA2	3327323	3328630	-	molybdopterin biosynthesis protein MoeA	identified by match to protein family HMM PF00994%3B match to protein family HMM PF03453%3B match to protein family HMM PF03454%3B match to protein family HMM TIGR00177	gene	gene3608	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3650
BAA_3651	BAA_3651		BAA_3651	3328649	3329665	-	putative molybdopterin biosynthesis protein MoeB	identified by match to protein family HMM PF00899%3B match to protein family HMM PF05237	gene	gene3609	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3651
BAA_3652	BAA_3652		BAA_3652	3329690	3330469	-	putative formate transporter	identified by match to protein family HMM PF01226	gene	gene3610	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3652
BAA_3653	BAA_3653	narA2	narA2	3330659	3331675	-	molybdenum cofactor biosynthesis protein A	identified by match to protein family HMM PF04055%3B match to protein family HMM PF06463%3B match to protein family HMM TIGR02666	gene	gene3611	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3653
BAA_3654	BAA_3654	fdhD2	fdhD2	3331696	3332493	-	formate dehydrogenase accessory protein FdhD	identified by match to protein family HMM PF02634%3B match to protein family HMM TIGR00129	gene	gene3612	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3654
BAA_3655	BAA_3655		BAA_3655	3332510	3332854	-	conserved hypothetical protein		gene	gene3613	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3655
BAA_3656	BAA_3656		BAA_3656	3332970	3333452	-	conserved hypothetical protein	identified by match to protein family HMM PF07849	gene	gene3614	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3656
BAA_3657	BAA_3657		BAA_3657	3333464	3336403	-	molybdopterin oxidoreductase family protein	identified by match to protein family HMM PF00037%3B match to protein family HMM PF00111%3B match to protein family HMM PF00384%3B match to protein family HMM PF01568%3B match to protein family HMM PF04879%3B match to protein family HMM TIGR01591	gene	gene3615	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3657
BAA_3658	BAA_3658		BAA_3658	3336372	3336563	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3616	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3658
BAA_3659	BAA_3659	gerSA	gerSA	3336701	3338239	+	spore germination protein	identified by match to protein family HMM PF03323	gene	gene3617	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3659
BAA_3660	BAA_3660	gerSB	gerSB	3338236	3339333	+	spore germination protein	identified by match to protein family HMM PF03845%3B match to protein family HMM TIGR00912	gene	gene3618	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3660
BAA_3661	BAA_3661	gerSC	gerSC	3339334	3340470	+	spore germination protein	identified by match to protein family HMM PF05504%3B match to protein family HMM TIGR02887	gene	gene3619	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3661
BAA_3662	BAA_3662		BAA_3662	3340550	3340684	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3620	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3662
BAA_3663	BAA_3663		BAA_3663	3340742	3344104	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3621	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3663
BAA_3664	BAA_3664		BAA_3664	3344178	3346277	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3622	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3664
BAA_3665	BAA_3665		BAA_3665	3346528	3346863	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3623	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3665
BAA_3666	BAA_3666		BAA_3666	3346860	3347003	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3624	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3666
BAA_3667	BAA_3667		BAA_3667	3346998	3347393	+	conserved hypothetical protein		gene	gene3625	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3667
BAA_3668	BAA_3668		BAA_3668	3347434	3348153	-	conserved hypothetical protein	identified by match to protein family HMM PF08241%3B match to protein family HMM PF08242	gene	gene3626	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3668
BAA_3669	BAA_3669		BAA_3669	3348266	3349972	-	putative oligopeptide ABC transporter%2C oligopeptide-binding protein	identified by match to protein family HMM PF00496	gene	gene3627	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3669
BAA_3670	BAA_3670		BAA_3670	3350258	3351964	-	putative oligopeptide ABC transporter%2C oligopeptide-binding protein	identified by match to protein family HMM PF00496	gene	gene3628	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3670
BAA_3671	BAA_3671		BAA_3671	3352175	3352288	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3629	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3671
BAA_3672	BAA_3672		BAA_3672	3352272	3353975	-	putative oligopeptide ABC transporter%2C oligopeptide-binding protein	identified by match to protein family HMM PF00496	gene	gene3630	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3672
BAA_3673	BAA_3673		BAA_3673	3354323	3355219	-		C4-dicarboxylate transporter%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00375	pseudogene	gene3631	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3673
BAA_3674	BAA_3674		BAA_3674	3355324	3355584	-		proton/sodium-glutamate symport protein (Glutamate-aspartate carrierprotein)%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene3632	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3674
BAA_3675	BAA_3675		BAA_3675	3355784	3356821	-	transcription antiterminator%2C LytR family	identified by match to protein family HMM PF03816%3B match to protein family HMM TIGR00350	gene	gene3633	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3675
BAA_3676	BAA_3676		BAA_3676	3356837	3357835	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3634	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3676
BAA_3677	BAA_3677		BAA_3677	3357848	3358381	-	RNA polymerase sigma-70 factor%2C ECF subfamily	identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937	gene	gene3635	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3677
BAA_3678	BAA_3678		BAA_3678	3358509	3358685	-		glyoxalase domain protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene3636	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3678
BAA_3679	BAA_3679		BAA_3679	3358752	3358880	-		conserved domain protein%3B this region contains one or more premature stops and/or frameshifts	pseudogene	gene3637	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3679
BAA_3680	BAA_3680		BAA_3680	3358931	3359533	-		ABC transporter%2C permease protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene3638	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3680
BAA_3681	BAA_3681		BAA_3681	3359533	3359736	-		ABC transporter%2C permease%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene3639	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3681
BAA_3682	BAA_3682		BAA_3682	3359729	3360622	-	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene3640	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3682
BAA_3683	BAA_3683		BAA_3683	3360787	3361380	+	transcriptional regulator%2C TetR family	identified by match to protein family HMM PF00440	gene	gene3641	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3683
BAA_3684	BAA_3684		BAA_3684	3361404	3362435	-	oxidoreductase%2C Gfo/Idh/MocA family	identified by match to protein family HMM PF01118%3B match to protein family HMM PF01408%3B match to protein family HMM PF02894%3B match to protein family HMM PF03447	gene	gene3642	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3684
BAA_3685	BAA_3685	parC	parC	3362605	3365028	-	DNA topoisomerase IV%2C A subunit	identified by match to protein family HMM PF00521%3B match to protein family HMM PF03989%3B match to protein family HMM TIGR01061	gene	gene3643	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3685
BAA_3686	BAA_3686	parE	parE	3365030	3366994	-	DNA topoisomerase IV%2C B subunit	identified by match to protein family HMM PF00204%3B match to protein family HMM PF00986%3B match to protein family HMM PF02518%3B match to protein family HMM TIGR01058	gene	gene3644	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3686
BAA_3687	BAA_3687		BAA_3687	3367370	3367783	-	CoA binding domain family protein	identified by match to protein family HMM PF02629	gene	gene3645	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3687
BAA_3688	BAA_3688	htrA	htrA	3367863	3369104	-	serine protease HtrA	identified by match to protein family HMM PF00089	gene	gene3646	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3688
BAA_3689	BAA_3689		BAA_3689	3369307	3369984	-	DNA-binding response regulator	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486	gene	gene3647	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3689
BAA_3690	BAA_3690		BAA_3690	3370004	3370177	-		putative anaerobic ribonucleoside-triphosphate reductase activating protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene3648	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3690
BAA_3691	BAA_3691		BAA_3691	3370156	3370455	-		adical activating%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene3649	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3691
BAA_3692	BAA_3692		BAA_3692	3370452	3372308	-	putative anaerobic ribonucleoside-triphosphate reductase	identified by match to protein family HMM TIGR02487	gene	gene3650	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3692
BAA_3693	BAA_3693		BAA_3693	3372534	3373130	+	conserved hypothetical protein	identified by match to protein family HMM PF02660%3B match to protein family HMM TIGR00023	gene	gene3651	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3693
BAA_3694	BAA_3694		BAA_3694	3373239	3373529	+	conserved hypothetical protein	identified by match to protein family HMM PF01521	gene	gene3652	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3694
BAA_3695	BAA_3695		BAA_3695	3373556	3373975	-	putative 4-hydroxybenzoyl-CoA thioesterase	identified by match to protein family HMM PF03061%3B match to protein family HMM TIGR00051	gene	gene3653	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3695
BAA_3696	BAA_3696		BAA_3696	3374085	3375377	+	glycosyl hydrolase%2C family 18	identified by match to protein family HMM PF00704%3B match to protein family HMM PF01476	gene	gene3654	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3696
BAA_3697	BAA_3697	tlp	tlp	3375406	3375603	-	small%2C acid-soluble spore protein tlp	identified by match to protein family HMM TIGR03090	gene	gene3655	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3697
BAA_3698	BAA_3698	sspN	sspN	3375703	3375837	-	small%2C acid-soluble spore protein N	identified by match to protein family HMM PF08177	gene	gene3656	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3698
BAA_3699	BAA_3699		BAA_3699	3375881	3376033	-	conserved hypothetical protein		gene	gene3657	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3699
BAA_3700	BAA_3700		BAA_3700	3376166	3377113	-	putative DNA polymerase III%2C epsilon subunit	identified by match to protein family HMM PF00929%3B match to protein family HMM TIGR00573	gene	gene3658	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3700
BAA_3701	BAA_3701		BAA_3701	3377229	3377804	-	ahpC/TSA family protein	identified by match to protein family HMM PF00085%3B match to protein family HMM PF00578%3B match to protein family HMM PF08534	gene	gene3660	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3701
BAA_3702	BAA_3702		BAA_3702	3377114	3377242	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3659	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3702
BAA_3703	BAA_3703		BAA_3703	3378054	3378311	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3661	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3703
BAA_3704	BAA_3704		BAA_3704	3378335	3379984	-	ABC transporter%2C permease/ATP-binding protein	identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664	gene	gene3662	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3704
BAA_3705	BAA_3705	acnA	acnA	3380101	3382824	-	aconitate hydratase 1	identified by match to protein family HMM PF00330%3B match to protein family HMM PF00694%3B match to protein family HMM TIGR01341	gene	gene3663	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3705
BAA_3706	BAA_3706	sspO	sspO	3383116	3383265	+	small%2C acid-soluble spore protein O	identified by match to protein family HMM PF08175%3B match to protein family HMM TIGR02864	gene	gene3664	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3706
BAA_3707	BAA_3707		BAA_3707	3383307	3384032	-	putative polysaccharide deacetylase	identified by match to protein family HMM PF01522%3B match to protein family HMM TIGR02764	gene	gene3665	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3707
BAA_3708	BAA_3708		BAA_3708	3384079	3384342	-	conserved domain protein		gene	gene3666	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3708
BAA_3709	BAA_3709	cotM	cotM	3384710	3385096	+	spore coat protein M		gene	gene3667	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3709
BAA_3710	BAA_3710		BAA_3710	3385140	3385415	-	conserved domain protein		gene	gene3668	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3710
BAA_3711	BAA_3711		BAA_3711	3385473	3385880	-	conserved domain protein		gene	gene3669	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3711
BAA_3712	BAA_3712		BAA_3712	3386018	3387220	+	alanyl-tRNA synthetase family protein	identified by match to protein family HMM PF02272%3B match to protein family HMM PF07973	gene	gene3670	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3712
BAA_3713	BAA_3713		BAA_3713	3387265	3387708	-	MutT/NUDIX family protein	identified by match to protein family HMM PF00293	gene	gene3671	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3713
BAA_3714	BAA_3714		BAA_3714	3387813	3388394	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3672	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3714
BAA_3715	BAA_3715		BAA_3715	3388402	3389493	-	acetyl-CoA acetyltransferase	identified by match to protein family HMM PF00108%3B match to protein family HMM PF02803%3B match to protein family HMM TIGR01930	gene	gene3673	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3715
BAA_3716	BAA_3716		BAA_3716	3389486	3390949	-	AMP-binding protein	identified by match to protein family HMM PF00501	gene	gene3674	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3716
BAA_3717	BAA_3717		BAA_3717	3391015	3391590	-	bioY family protein	identified by match to protein family HMM PF02632	gene	gene3675	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3717
BAA_3718	BAA_3718	alkK	alkK	3391714	3393327	-	medium-chain-fatty-acid--CoA ligase	identified by match to protein family HMM PF00501	gene	gene3676	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3718
BAA_3719	BAA_3719		BAA_3719	3393924	3394127	-	conserved hypothetical protein		gene	gene3677	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3719
BAA_3720	BAA_3720		BAA_3720	3394280	3395092	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3678	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3720
BAA_3721	BAA_3721		BAA_3721	3395264	3395476	+	conserved hypothetical protein	identified by match to protein family HMM PF05532	gene	gene3679	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3721
BAA_3722	BAA_3722		BAA_3722	3395681	3397189	-	putative S-layer protein	identified by match to protein family HMM PF00395	gene	gene3680	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3722
BAA_3723	BAA_3723		BAA_3723	3397552	3397980	+	putative blasticidin S deaminase		gene	gene3681	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3723
BAA_3724	BAA_3724		BAA_3724	3398093	3398344	-	conserved hypothetical protein		gene	gene3682	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3724
BAA_3725	BAA_3725		BAA_3725	3398362	3398814	-	putative N-acetylmuramoyl-L-alanine amidase	identified by match to protein family HMM PF01510	gene	gene3683	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3725
BAA_3726	BAA_3726		BAA_3726	3398830	3399633	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3684	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3726
BAA_3727	BAA_3727		BAA_3727	3399748	3400587	+	putative membrane protein	identified by match to protein family HMM PF02588	gene	gene3685	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3727
BAA_3728	BAA_3728		BAA_3728	3400608	3400979	-	glyoxalase family protein	identified by match to protein family HMM PF00903	gene	gene3686	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3728
BAA_3729	BAA_3729	kinA	kinA	3401216	3402748	+	sporulation kinase A	identified by match to protein family HMM PF00512%3B match to protein family HMM PF00989%3B match to protein family HMM PF02518%3B match to protein family HMM PF08448%3B match to protein family HMM TIGR00229	gene	gene3687	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3729
BAA_3730	BAA_3730		BAA_3730	3402802	3403413	-	phospholipase/carboxylesterase family protein	identified by match to protein family HMM PF02230	gene	gene3688	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3730
BAA_3731	BAA_3731		BAA_3731	3403438	3404376	-	glyoxylase family protein	identified by match to protein family HMM PF00903	gene	gene3689	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3731
BAA_3732	BAA_3732		BAA_3732	3404718	3406196	-	sodium/proline symporter family protein	identified by match to protein family HMM PF00474%3B match to protein family HMM TIGR00813%3B match to protein family HMM TIGR02121	gene	gene3690	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3732
BAA_3733	BAA_3733		BAA_3733	3406484	3408052	-	conserved hypothetical protein	identified by match to protein family HMM PF01645	gene	gene3691	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3733
BAA_3734	BAA_3734		BAA_3734	3408120	3409247	-	NADH-dependent flavin oxidoreductase%2C Oye family	identified by match to protein family HMM PF00724	gene	gene3692	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3734
BAA_3735	BAA_3735		BAA_3735	3409829	3410305	-	transcriptional regulator%2C CarD family	identified by match to protein family HMM PF02559	gene	gene3693	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3735
BAA_3736	BAA_3736	hutG	hutG	3410552	3411523	-	formimidoylglutamase	identified by match to protein family HMM PF00491%3B match to protein family HMM TIGR01227	gene	gene3694	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3736
BAA_3737	BAA_3737	hutI	hutI	3411502	3412773	-	imidazolonepropionase	identified by match to protein family HMM PF01979%3B match to protein family HMM PF07969%3B match to protein family HMM TIGR01224	gene	gene3695	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3737
BAA_3738	BAA_3738	hutU	hutU	3412786	3414444	-	urocanate hydratase	identified by match to protein family HMM PF01175%3B match to protein family HMM TIGR01228	gene	gene3696	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3738
BAA_3739	BAA_3739	hutH	hutH	3414468	3415985	-	histidine ammonia-lyase	identified by match to protein family HMM PF00221%3B match to protein family HMM TIGR01225	gene	gene3697	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3739
BAA_3740	BAA_3740	hutP	hutP	3416090	3416530	-	hut operon transcriptional activator	identified by match to protein family HMM PF09021	gene	gene3698	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3740
BAA_3741	BAA_3741		BAA_3741	3416724	3417671	+	conserved domain protein	identified by match to protein family HMM PF08241%3B match to protein family HMM PF08242	gene	gene3699	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3741
BAA_3742	BAA_3742		BAA_3742	3417685	3418257	-	thiJ/pfpI family protein	identified by match to protein family HMM PF01965	gene	gene3700	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3742
BAA_3743	BAA_3743		BAA_3743	3418254	3418784	-	conserved hypothetical protein		gene	gene3701	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3743
BAA_3744	BAA_3744		BAA_3744	3419039	3419335	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3702	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3744
BAA_3745	BAA_3745		BAA_3745	3419439	3419879	+	conserved hypothetical protein		gene	gene3703	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3745
BAA_3746	BAA_3746		BAA_3746	3419909	3420979	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3704	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3746
BAA_3747	BAA_3747		BAA_3747	3421256	3421483	+		conserved repeat domain protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM TIGR01451	pseudogene	gene3705	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3747
BAA_3748	BAA_3748		BAA_3748	3421545	3421862	-	conserved hypothetical protein		gene	gene3706	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3748
BAA_3749	BAA_3749		BAA_3749	3422070	3422198	-	conserved hypothetical protein		gene	gene3707	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3749
BAA_3750	BAA_3750		BAA_3750	3422476	3428817	+	conserved repeat domain protein	identified by match to protein family HMM PF01345%3B match to protein family HMM TIGR01451	gene	gene3708	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3750
BAA_3751	BAA_3751		BAA_3751	3428880	3429386	-	ccdC protein	identified by match to protein family HMM PF07301	gene	gene3709	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3751
BAA_3752	BAA_3752	ccdA2	ccdA2	3429477	3430184	-	cytochrome c-type biogenesis protein CcdA	identified by match to protein family HMM PF02683	gene	gene3710	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3752
BAA_3753	BAA_3753		BAA_3753	3430389	3430898	-	conserved domain protein		gene	gene3711	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3753
BAA_3754	BAA_3754		BAA_3754	3431195	3432100	-	putative als operon regulatory protein AlsR	identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466	gene	gene3712	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3754
BAA_3755	BAA_3755		BAA_3755	3432253	3432618	+	conserved hypothetical protein	identified by match to protein family HMM PF03788	gene	gene3713	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3755
BAA_3756	BAA_3756		BAA_3756	3432615	3433292	+	putative membrane protein	identified by match to protein family HMM PF04172	gene	gene3714	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3756
BAA_3757	BAA_3757		BAA_3757	3433305	3433718	-	MutT/NUDIX family protein	identified by match to protein family HMM PF00293	gene	gene3715	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3757
BAA_3758	BAA_3758		BAA_3758	3433860	3434060	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3716	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3758
BAA_3759	BAA_3759		BAA_3759	3434376	3434510	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene3717	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3759
BAA_3760	BAA_3760		BAA_3760	3434498	3435181	-		permease%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01925	pseudogene	gene3718	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3760
BAA_3761	BAA_3761		BAA_3761	3435242	3435388	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3719	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3761
BAA_3762	BAA_3762		BAA_3762	3435553	3437337	-	surface-layer N-acetylmuramoyl-L-alanine amidase	identified by match to protein family HMM PF00395%3B match to protein family HMM PF01510	gene	gene3720	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3762
BAA_3763	BAA_3763		BAA_3763	3437496	3437999	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3721	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3763
BAA_3764	BAA_3764		BAA_3764	3438069	3439088	-	conserved hypothetical protein		gene	gene3722	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3764
BAA_3765	BAA_3765		BAA_3765	3439207	3440970	-	ABC transporter%2C permease/ATP-binding protein	identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664	gene	gene3723	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3765
BAA_3766	BAA_3766		BAA_3766	3440970	3442721	-	ABC transporter%2C permease/ATP-binding protein	identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664	gene	gene3724	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3766
BAA_3767	BAA_3767		BAA_3767	3442845	3443066	-	conserved hypothetical protein	identified by match to protein family HMM PF03672	gene	gene3725	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3767
BAA_3768	BAA_3768		BAA_3768	3443145	3443585	-	conserved hypothetical protein		gene	gene3726	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3768
BAA_3769	BAA_3769	tkt2	tkt2	3443742	3445784	-	transketolase	identified by match to protein family HMM PF00456%3B match to protein family HMM PF02779%3B match to protein family HMM PF02780%3B match to protein family HMM TIGR00232	gene	gene3727	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3769
BAA_3770	BAA_3770		BAA_3770	3446142	3447254	-	transposase%2C IS605 family	identified by match to protein family HMM PF01385%3B match to protein family HMM PF07282%3B match to protein family HMM TIGR01766	gene	gene3728	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3770
BAA_3771	BAA_3771		BAA_3771	3447553	3448356	-	phosphonate ABC transporter%2C permease protein	identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01097	gene	gene3729	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3771
BAA_3772	BAA_3772		BAA_3772	3448356	3449150	-	phosphonate ABC transporter%2C permease protein	identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01097	gene	gene3730	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3772
BAA_3773	BAA_3773		BAA_3773	3449147	3449920	-	phosphonate ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR02315	gene	gene3731	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3773
BAA_3774	BAA_3774		BAA_3774	3450004	3450942	-	putative phosphonate ABC transporter%2C phosphonate-binding protein	identified by match to protein family HMM TIGR01098	gene	gene3732	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3774
BAA_3775	BAA_3775		BAA_3775	3451128	3452090	+		2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase%2C N-terminus%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00149	pseudogene	gene3733	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3775
BAA_3776	BAA_3776		BAA_3776	3452102	3452710	+		5'-nucleotidase family protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02872	pseudogene	gene3734	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3776
BAA_3777	BAA_3777		BAA_3777	3452750	3452989	-	conserved hypothetical protein	identified by match to protein family HMM PF05979	gene	gene3735	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3777
BAA_3778	BAA_3778		BAA_3778	3453035	3453691	-	site-specific recombinase%2C resolvase family	identified by match to protein family HMM PF00239	gene	gene3736	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3778
BAA_3779	BAA_3779	lexA	lexA	3453782	3454453	+	LexA repressor	identified by match to protein family HMM PF00717%3B match to protein family HMM PF01726%3B match to protein family HMM TIGR00498	gene	gene3737	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3779
BAA_3780	BAA_3780		BAA_3780	3454541	3455347	-	conserved hypothetical protein		gene	gene3738	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3780
BAA_3781	BAA_3781		BAA_3781	3455348	3455890	-	conserved hypothetical protein	identified by match to protein family HMM PF08006	gene	gene3739	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3781
BAA_3782	BAA_3782		BAA_3782	3455883	3456206	-	conserved hypothetical protein	identified by match to protein family HMM PF03551	gene	gene3740	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3782
BAA_3783	BAA_3783		BAA_3783	3456326	3456451	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3741	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3783
BAA_3784	BAA_3784		BAA_3784	3456943	3457092	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3742	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3784
BAA_3785	BAA_3785		BAA_3785	3457089	3458168	-	putative prophage LambdaBa01%2C TPR domain protein		gene	gene3743	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3785
BAA_3786	BAA_3786		BAA_3786	3458533	3458760	-	conserved hypothetical protein		gene	gene3744	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3786
BAA_3787	BAA_3787		BAA_3787	3459266	3459388	-	conserved domain protein		gene	gene3745	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3787
BAA_3788	BAA_3788		BAA_3788	3459472	3459804	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3746	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3788
BAA_3789	BAA_3789		BAA_3789	3459973	3460212	-	conserved hypothetical protein		gene	gene3747	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3789
BAA_3790	BAA_3790		BAA_3790	3460215	3460346	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3748	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3790
BAA_3791	BAA_3791		BAA_3791	3460477	3460647	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3749	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3791
BAA_3792	BAA_3792		BAA_3792	3460762	3461694	-	prophage LambdaBa01%2C N-acetylmuramoyl-L-alanine amidase%2C family 2	identified by match to protein family HMM PF01510%3B match to protein family HMM PF08239	gene	gene3750	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3792
BAA_3793	BAA_3793		BAA_3793	3461694	3462119	-	putative prophage LambdaBa01%2C holin	identified by match to protein family HMM PF05105%3B match to protein family HMM TIGR01593	gene	gene3751	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3793
BAA_3794	BAA_3794		BAA_3794	3462231	3462506	-	prophage LambdaBa01%2C transcriptional regulator%2C AbrB family		gene	gene3752	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3794
BAA_3795	BAA_3795		BAA_3795	3462524	3464413	-		prophage LambdaBa01%2C minor structural protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene3753	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3795
BAA_3796	BAA_3796		BAA_3796	3464606	3467257	-		phage minor structural protein%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM TIGR01665	pseudogene	gene3754	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3796
BAA_3797	BAA_3797		BAA_3797	3467254	3468162	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene3755	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3797
BAA_3798	BAA_3798		BAA_3798	3468225	3468734	-		phage putative tail component%2C N- domain%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM TIGR01633	pseudogene	gene3756	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3798
BAA_3799	BAA_3799		BAA_3799	3468776	3471160	-	putative prophage LambdaBa01%2C membrane protein	identified by match to protein family HMM PF05017	gene	gene3757	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3799
BAA_3800	BAA_3800		BAA_3800	3471235	3471453	-			gene	gene3758	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3800
BAA_3801	BAA_3801		BAA_3801	3471426	3472673	-		conserved domain protein%3B this region contains one or more premature stops and/or frameshifts	pseudogene	gene3759	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3801
BAA_3802	BAA_3802		BAA_3802	3472689	3472850	-	conserved hypothetical protein		gene	gene3760	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3802
BAA_3803	BAA_3803		BAA_3803	3472894	3473265	-	conserved hypothetical protein		gene	gene3761	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3803
BAA_3804	BAA_3804		BAA_3804	3473270	3473863	-	putative prophage LambdaBa01%2C major tail protein	identified by match to protein family HMM TIGR01603	gene	gene3762	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3804
BAA_3805	BAA_3805		BAA_3805	3473864	3474193	-	conserved hypothetical protein		gene	gene3763	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3805
BAA_3806	BAA_3806		BAA_3806	3474190	3474546	-	conserved hypothetical protein		gene	gene3764	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3806
BAA_3807	BAA_3807		BAA_3807	3474539	3474838	-	conserved hypothetical protein	identified by match to protein family HMM TIGR01563	gene	gene3765	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3807
BAA_3808	BAA_3808		BAA_3808	3474835	3475107	-	conserved domain protein	identified by match to protein family HMM TIGR01560	gene	gene3766	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3808
BAA_3809	BAA_3809		BAA_3809	3475110	3475400	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3767	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3809
BAA_3810	BAA_3810		BAA_3810	3475437	3476600	-	putative phage major capsid protein		gene	gene3768	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3810
BAA_3811	BAA_3811		BAA_3811	3476614	3477198	-	putative prophage LambdaBa01%2C prohead protease	identified by match to protein family HMM PF04586%3B match to protein family HMM TIGR01543	gene	gene3769	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3811
BAA_3812	BAA_3812		BAA_3812	3477164	3478375	-	conserved hypothetical protein	identified by match to protein family HMM PF04860%3B match to protein family HMM TIGR01537	gene	gene3770	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3812
BAA_3813	BAA_3813		BAA_3813	3478391	3480061	-	putative prophage LambdaBa01%2C terminase%2C large subunit	identified by match to protein family HMM PF03354	gene	gene3771	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3813
BAA_3814	BAA_3814		BAA_3814	3480076	3480447	-	conserved hypothetical protein		gene	gene3772	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3814
BAA_3815	BAA_3815		BAA_3815	3480613	3480909	-	conserved domain protein	identified by match to protein family HMM PF01844	gene	gene3773	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3815
BAA_3816	BAA_3816		BAA_3816	3481673	3482095	+	conserved hypothetical protein	identified by match to protein family HMM PF03681	gene	gene3774	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3816
BAA_3817	BAA_3817		BAA_3817	3482182	3482607	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3775	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3817
BAA_3818	BAA_3818		BAA_3818	3482728	3483006	-	conserved hypothetical protein		gene	gene3776	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3818
BAA_3819	BAA_3819		BAA_3819	3483575	3484351	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3777	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3819
BAA_3820	BAA_3820		BAA_3820	3484466	3485449	-	conserved domain protein		gene	gene3778	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3820
BAA_3821	BAA_3821		BAA_3821	3485482	3485814	-	conserved hypothetical protein	identified by match to protein family HMM PF03819	gene	gene3779	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3821
BAA_3822	BAA_3822		BAA_3822	3485955	3486590	+	conserved hypothetical protein	identified by match to protein family HMM PF01844	gene	gene3780	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3822
BAA_3823	BAA_3823		BAA_3823	3486629	3486841	-	helix-turn-helix%2C putative	identified by match to protein family HMM PF01381	gene	gene3781	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3823
BAA_3824	BAA_3824		BAA_3824	3486910	3488049	-	conserved hypothetical protein		gene	gene3782	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3824
BAA_3825	BAA_3825		BAA_3825	3488198	3488701	-	putative prophage LambdaBa01%2C positive control factor Xpf	identified by match to protein family HMM PF04545%3B match to protein family HMM PF04967%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937	gene	gene3783	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3825
BAA_3826	BAA_3826		BAA_3826	3489270	3489833	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3784	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3826
BAA_3827	BAA_3827		BAA_3827	3489854	3492484	-	putative prophage LambdaBa01%2C acyltransferase	identified by match to protein family HMM PF02450	gene	gene3785	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3827
BAA_3828	BAA_3828		BAA_3828	3492838	3493086	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3786	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3828
BAA_3829	BAA_3829		BAA_3829	3493268	3494077	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3787	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3829
BAA_3830	BAA_3830		BAA_3830	3494359	3494475	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3788	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3830
BAA_3831	BAA_3831		BAA_3831	3494537	3494776	-	conserved domain protein		gene	gene3789	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3831
BAA_3832	BAA_3832		BAA_3832	3494987	3495313	-	conserved domain protein		gene	gene3790	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3832
BAA_3833	BAA_3833		BAA_3833	3495345	3495629	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3791	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3833
BAA_3834	BAA_3834		BAA_3834	3495730	3495894	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3792	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3834
BAA_3835	BAA_3835		BAA_3835	3496024	3496782	-	prophage LambdaBa01%2C thymidylate synthase-complementing protein	identified by match to protein family HMM PF02511%3B match to protein family HMM TIGR02170	gene	gene3793	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3835
BAA_3836	BAA_3836		BAA_3836	3497014	3497793	-	prophage LambdaBa01%2C C-5 cytosine-specific DNA methylase family protein	identified by match to protein family HMM PF00145	gene	gene3794	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3836
BAA_3837	BAA_3837		BAA_3837	3497808	3498380	-	conserved hypothetical protein	identified by match to protein family HMM PF08761	gene	gene3795	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3837
BAA_3838	BAA_3838		BAA_3838	3498600	3499229	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3796	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3838
BAA_3839	BAA_3839		BAA_3839	3499226	3499396	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3797	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3839
BAA_3840	BAA_3840		BAA_3840	3499414	3500133	-	conserved domain protein		gene	gene3798	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3840
BAA_3841	BAA_3841		BAA_3841	3500180	3500938	-	conserved hypothetical protein	identified by match to protein family HMM PF09524%3B match to protein family HMM TIGR02220	gene	gene3799	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3841
BAA_3842	BAA_3842		BAA_3842	3500935	3501207	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3800	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3842
BAA_3843	BAA_3843		BAA_3843	3501221	3501892	-	conserved hypothetical protein	identified by match to protein family HMM PF06378	gene	gene3801	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3843
BAA_3844	BAA_3844		BAA_3844	3501889	3502371	-	conserved hypothetical protein	identified by match to protein family HMM PF05565	gene	gene3802	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3844
BAA_3845	BAA_3845		BAA_3845	3502386	3502550	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3803	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3845
BAA_3846	BAA_3846		BAA_3846	3502621	3502938	-	conserved hypothetical protein		gene	gene3804	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3846
BAA_3847	BAA_3847		BAA_3847	3502928	3503089	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3805	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3847
BAA_3848	BAA_3848		BAA_3848	3503089	3503355	-	conserved hypothetical protein		gene	gene3806	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3848
BAA_3849	BAA_3849		BAA_3849	3503464	3504192	-	conserved hypothetical protein	identified by match to protein family HMM PF09669%3B match to protein family HMM TIGR02681	gene	gene3807	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3849
BAA_3850	BAA_3850		BAA_3850	3504189	3504389	-	conserved hypothetical protein		gene	gene3808	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3850
BAA_3851	BAA_3851		BAA_3851	3504656	3505078	+	conserved hypothetical protein		gene	gene3809	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3851
BAA_3852	BAA_3852		BAA_3852	3505101	3505529	+	putative prophage LambdaBa01%2C repressor protein	identified by match to protein family HMM PF06114	gene	gene3810	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3852
BAA_3853	BAA_3853		BAA_3853	3505545	3505712	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3811	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3853
BAA_3854	BAA_3854		BAA_3854	3505754	3506224	+		prophage LambdaBa01%2C site-specific recombinase%2C phage integrase family%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene3812	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3854
BAA_3855	BAA_3855		BAA_3855	3506269	3506898	+		phage integrase%2C phage integrase family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00589	pseudogene	gene3813	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3855
BAA_3856	BAA_3856	glnA	glnA	3507013	3508347	-	glutamine synthetase%2C type I	identified by match to protein family HMM PF00120%3B match to protein family HMM PF03951%3B match to protein family HMM TIGR00653	gene	gene3814	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3856
BAA_3857	BAA_3857	glnR	glnR	3508396	3508785	-	transcriptional repressor GlnR	identified by match to protein family HMM PF00376	gene	gene3815	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3857
BAA_3858	BAA_3858		BAA_3858	3508961	3510232	-	aluminum resistance protein	identified by match to protein family HMM PF01053%3B match to protein family HMM PF06838	gene	gene3816	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3858
BAA_3859	BAA_3859		BAA_3859	3510225	3510437	-		GTP-binding protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene3817	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3859
BAA_3860	BAA_3860	hflX	hflX	3510434	3511498	-		GTP-binding protein HflX%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01926%3B match to protein family HMM TIGR03156	pseudogene	gene3818	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3860
BAA_3861	BAA_3861		BAA_3861	3511588	3512211	+	putative membrane protein	identified by match to protein family HMM PF03458	gene	gene3819	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3861
BAA_3862	BAA_3862	spoVK	spoVK	3512480	3513436	-	stage V sporulation protein K	identified by match to protein family HMM PF00004%3B match to protein family HMM TIGR02881	gene	gene3820	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3862
BAA_3863	BAA_3863		BAA_3863	3513550	3514515	+	site-specific recombinase%2C phage integrase family	identified by match to protein family HMM PF02899	gene	gene3821	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3863
BAA_3864	BAA_3864		BAA_3864	3514629	3516065	+	conserved hypothetical protein	identified by match to protein family HMM PF01391	gene	gene3822	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3864
BAA_3865	BAA_3865	hfq2	hfq2	3516146	3516370	-	host factor-I protein	identified by match to protein family HMM PF01423%3B match to protein family HMM TIGR02383	gene	gene3823	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3865
BAA_3866	BAA_3866	miaA	miaA	3516392	3517345	-	tRNA delta(2)-isopentenylpyrophosphate transferase	identified by match to protein family HMM PF01715%3B match to protein family HMM TIGR00174	gene	gene3824	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3866
BAA_3867	BAA_3867		BAA_3867	3517527	3517772	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3825	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3867
BAA_3868	BAA_3868		BAA_3868	3517835	3518767	-	conserved domain protein	identified by match to protein family HMM PF06347%3B match to protein family HMM PF06725%3B match to protein family HMM PF08239	gene	gene3826	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3868
BAA_3869	BAA_3869		BAA_3869	3519115	3520995	-	PTS system%2C fructose-specific IIABC component	identified by match to protein family HMM PF00359%3B match to protein family HMM PF02378%3B match to protein family HMM PF02379%3B match to protein family HMM TIGR00829%3B match to protein family HMM TIGR00848%3B match to protein family HMM TIGR01427	gene	gene3827	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3869
BAA_3870	BAA_3870	fruB	fruB	3521009	3521920	-	1-phosphofructokinase	identified by match to protein family HMM PF00294%3B match to protein family HMM TIGR03168	gene	gene3828	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3870
BAA_3871	BAA_3871		BAA_3871	3521917	3522669	-	transcriptional regulator%2C DeoR family	identified by match to protein family HMM PF00455%3B match to protein family HMM PF08220	gene	gene3829	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3871
BAA_3872	BAA_3872		BAA_3872	3522829	3523557	-		alcohol dehydrogenase%2C iron-containing%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00465	pseudogene	gene3830	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3872
BAA_3873	BAA_3873		BAA_3873	3523554	3523991	-		NADH-dependent butanol dehydrogenase a (bdh i)%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene3831	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3873
BAA_3874	BAA_3874		BAA_3874	3524108	3524647	-	conserved hypothetical protein	identified by match to protein family HMM PF04238	gene	gene3832	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3874
BAA_3875	BAA_3875		BAA_3875	3524826	3524942	-	conserved hypothetical protein		gene	gene3833	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3875
BAA_3876	BAA_3876		BAA_3876	3524962	3525303	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3834	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3876
BAA_3877	BAA_3877	gabP	gabP	3525415	3526809	-	GABA permease	identified by match to protein family HMM PF00324%3B match to protein family HMM PF03845%3B match to protein family HMM TIGR01773	gene	gene3835	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3877
BAA_3878	BAA_3878	chi36	chi36	3527183	3528265	+	extracellular exochitinase Chi36	identified by match to protein family HMM PF00704	gene	gene3836	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3878
BAA_3879	BAA_3879		BAA_3879	3528319	3528462	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3837	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3879
BAA_3880	BAA_3880		BAA_3880	3528462	3529355	-	Ser/Thr protein phosphatase family protein	identified by match to protein family HMM PF00149	gene	gene3838	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3880
BAA_3881	BAA_3881		BAA_3881	3529552	3530367	+	putative formate transporter	identified by match to protein family HMM PF01226%3B match to protein family HMM TIGR00790	gene	gene3839	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3881
BAA_3882	BAA_3882	hup3	hup3	3530510	3530782	+	DNA-binding protein HU	identified by match to protein family HMM PF00216	gene	gene3840	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3882
BAA_3883	BAA_3883		BAA_3883	3530894	3533311	-	heavy metal-transporting ATPase	identified by match to protein family HMM PF00122%3B match to protein family HMM PF00403%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR00003%3B match to protein family HMM TIGR01494%3B match to protein family HMM TIGR01511%3B match to protein family HMM TIGR01525	gene	gene3841	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3883
BAA_3884	BAA_3884		BAA_3884	3533407	3533613	-		copper-ion-binding protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00403%3B match to protein family HMM TIGR00003	pseudogene	gene3842	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3884
BAA_3885	BAA_3885		BAA_3885	3533801	3534103	-	conserved hypothetical protein	identified by match to protein family HMM PF02583	gene	gene3843	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3885
BAA_3886	BAA_3886		BAA_3886	3534395	3534622	-	conserved domain protein		gene	gene3844	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3886
BAA_3887	BAA_3887		BAA_3887	3534954	3535781	-	conserved hypothetical protein	identified by match to protein family HMM PF00756	gene	gene3845	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3887
BAA_3888	BAA_3888		BAA_3888	3535798	3536619	-	iron compound ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene3846	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3888
BAA_3889	BAA_3889		BAA_3889	3536634	3537656	-	iron compound ABC transporter%2C permease protein	identified by match to protein family HMM PF01032	gene	gene3847	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3889
BAA_3890	BAA_3890		BAA_3890	3537649	3538656	-	iron compound ABC transporter%2C permease protein	identified by match to protein family HMM PF01032	gene	gene3848	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3890
BAA_3891	BAA_3891		BAA_3891	3538684	3539481	-		iron compound ABC transporter%2C iron compound-binding protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01497	pseudogene	gene3849	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3891
BAA_3892	BAA_3892		BAA_3892	3539496	3539642	-		iron(III) dicitrate transport ATP-binding protein fecE%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene3850	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3892
BAA_3893	BAA_3893	exoA	exoA	3539942	3540700	-	exodeoxyribonuclease III	identified by match to protein family HMM PF03372%3B match to protein family HMM TIGR00195%3B match to protein family HMM TIGR00633	gene	gene3851	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3893
BAA_3894	BAA_3894	adaA	adaA	3540855	3541451	+	Ada regulatory protein/6-O-methylguanine-DNA methyltransferase	identified by match to protein family HMM PF00165%3B match to protein family HMM PF02805	gene	gene3852	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3894
BAA_3895	BAA_3895	ogt2	ogt2	3541432	3541962	+	methylated-DNA--protein-cysteine S-methyltransferase	identified by match to protein family HMM PF01035%3B match to protein family HMM PF02870%3B match to protein family HMM TIGR00589	gene	gene3853	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3895
BAA_3896	BAA_3896	alkA	alkA	3541959	3542870	+	DNA-3-methyladenine glycosidase	identified by match to protein family HMM PF00730%3B match to protein family HMM PF07934	gene	gene3854	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3896
BAA_3897	BAA_3897	pepT	pepT	3542910	3544142	-	peptidase T	identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01882	gene	gene3855	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3897
BAA_3898	BAA_3898		BAA_3898	3544336	3544974	+	putative membrane protein	identified by match to protein family HMM PF02588	gene	gene3856	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3898
BAA_3899	BAA_3899		BAA_3899	3545065	3545382	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3857	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3899
BAA_3900	BAA_3900		BAA_3900	3545442	3545585	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3858	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3900
BAA_3901	BAA_3901		BAA_3901	3545706	3546281	-	putative phosphoglycerate mutase family protein	identified by match to protein family HMM PF00300	gene	gene3859	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3901
BAA_3902	BAA_3902		BAA_3902	3546312	3547127	-	hydrolase%2C alpha/beta fold family	identified by match to protein family HMM PF00561	gene	gene3860	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3902
BAA_3903	BAA_3903		BAA_3903	3547314	3547718	-	glyoxylase family protein	identified by match to protein family HMM PF00903	gene	gene3861	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3903
BAA_3904	BAA_3904		BAA_3904	3550828	3550944	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3863	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3904
BAA_3905	BAA_3905		BAA_3905	3548146	3550872	+	sensory box/GGDEF family protein	identified by match to protein family HMM PF00563%3B match to protein family HMM PF00989%3B match to protein family HMM PF00990%3B match to protein family HMM PF08448%3B match to protein family HMM TIGR00229%3B match to protein family HMM TIGR00254	gene	gene3862	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3905
BAA_3906	BAA_3906		BAA_3906	3551018	3552184	+	conserved hypothetical protein		gene	gene3864	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3906
BAA_3907	BAA_3907		BAA_3907	3552159	3552551	+		group-specific protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene3865	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3907
BAA_3908	BAA_3908		BAA_3908	3552582	3553013	-	conserved hypothetical protein		gene	gene3866	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3908
BAA_3909	BAA_3909		BAA_3909	3553029	3553688	-	putative membrane protein	identified by match to protein family HMM PF04172	gene	gene3867	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3909
BAA_3910	BAA_3910		BAA_3910	3553712	3554068	-	conserved hypothetical protein	identified by match to protein family HMM PF03788	gene	gene3868	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3910
BAA_3911	BAA_3911		BAA_3911	3554102	3555535	-	transcriptional regulator%2C GntR family/aminotransferase%2C class I protein	identified by match to protein family HMM PF00155%3B match to protein family HMM PF00392	gene	gene3869	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3911
BAA_3912	BAA_3912		BAA_3912	3555604	3556377	-	hydrolase%2C alpha/beta fold family	identified by match to protein family HMM PF00561	gene	gene3870	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3912
BAA_3913	BAA_3913		BAA_3913	3556401	3557081	-	conserved hypothetical protein	identified by match to protein family HMM PF02585	gene	gene3871	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3913
BAA_3914	BAA_3914		BAA_3914	3557125	3557316	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3872	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3914
BAA_3915	BAA_3915		BAA_3915	3557674	3558663	-	phosphatidylinositol diacylglycerol-lyase	identified by match to protein family HMM PF00388	gene	gene3873	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3915
BAA_3916	BAA_3916		BAA_3916	3558841	3560682	-	serine protease%2C subtilase family	identified by match to protein family HMM PF00082%3B match to protein family HMM PF04151	gene	gene3875	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3916
BAA_3917	BAA_3917		BAA_3917	3558758	3558889	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3874	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3917
BAA_3918	BAA_3918		BAA_3918	3560977	3561774	+	putative cell wall hydrolase	identified by match to protein family HMM PF01476%3B match to protein family HMM PF07486	gene	gene3876	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3918
BAA_3919	BAA_3919		BAA_3919	3562038	3563375	+	conserved hypothetical protein		gene	gene3877	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3919
BAA_3920	BAA_3920		BAA_3920	3563766	3565685	+	arylsulfatase	identified by match to protein family HMM PF00884	gene	gene3878	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3920
BAA_3921	BAA_3921		BAA_3921	3565771	3568554	-	conserved domain protein		gene	gene3879	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3921
BAA_3922	BAA_3922		BAA_3922	3569038	3569223	+	conserved domain protein		gene	gene3880	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3922
BAA_3923	BAA_3923		BAA_3923	3569537	3570523	-	choloylglycine hydrolase family protein	identified by match to protein family HMM PF02275	gene	gene3881	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3923
BAA_3924	BAA_3924		BAA_3924	3570738	3572099	-	putative lantibiotic biosynthesis sensor histidine kinase	identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518	gene	gene3882	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3924
BAA_3925	BAA_3925		BAA_3925	3572087	3572749	-	putative lantibiotic biosynthesis DNA-binding response regulator	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486	gene	gene3883	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3925
BAA_3926	BAA_3926		BAA_3926	3572791	3573549	-	putative bacteriocin ABC transporter%2C permease protein subunit		gene	gene3884	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3926
BAA_3927	BAA_3927		BAA_3927	3573551	3574303	-	putative bacteriocin ABC transporter%2C permease protein subunit		gene	gene3885	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3927
BAA_3928	BAA_3928		BAA_3928	3574307	3575011	-	putative bacteriocin ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene3886	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3928
BAA_3929	BAA_3929	mutL	mutL	3575250	3577130	-	DNA mismatch repair protein MutL	identified by match to protein family HMM PF01119%3B match to protein family HMM PF02518%3B match to protein family HMM PF08676%3B match to protein family HMM TIGR00585	gene	gene3887	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3929
BAA_3930	BAA_3930	mutS	mutS	3577139	3579817	-	DNA mismatch repair protein MutS	identified by match to protein family HMM PF00488%3B match to protein family HMM PF01624%3B match to protein family HMM PF05188%3B match to protein family HMM PF05190%3B match to protein family HMM PF05192%3B match to protein family HMM TIGR01070	gene	gene3888	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3930
BAA_3931	BAA_3931	cotE	cotE	3579999	3580541	-	spore coat protein E		gene	gene3889	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3931
BAA_3932	BAA_3932		BAA_3932	3580667	3581098	-	conserved hypothetical protein		gene	gene3890	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3932
BAA_3933	BAA_3933	miaB	miaB	3581102	3582631	-	tRNA-i(6)A37 thiotransferase enzyme MiaB	identified by match to protein family HMM PF00919%3B match to protein family HMM PF01938%3B match to protein family HMM PF04055%3B match to protein family HMM TIGR00089%3B match to protein family HMM TIGR01574	gene	gene3891	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3933
BAA_3934	BAA_3934		BAA_3934	3583059	3583925	-	putative pyruvate ferredoxin oxidoreductase%2C beta subunit	identified by match to protein family HMM PF02775%3B match to protein family HMM TIGR02177	gene	gene3892	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3934
BAA_3935	BAA_3935		BAA_3935	3583912	3585669	-	putative pyruvate ferredoxin oxidoreductase%2C alpha subunit	identified by match to protein family HMM PF01558%3B match to protein family HMM PF01855%3B match to protein family HMM PF02780	gene	gene3893	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3935
BAA_3936	BAA_3936		BAA_3936	3585897	3586820	-	renal dipeptidase family protein	identified by match to protein family HMM PF01244	gene	gene3894	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3936
BAA_3937	BAA_3937	spoVS2	spoVS2	3586880	3587140	-	stage V sporulation protein S	identified by match to protein family HMM PF04232	gene	gene3895	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3937
BAA_3938	BAA_3938		BAA_3938	3587290	3588084	-	phosphoesterase family protein	identified by match to protein family HMM PF00149%3B match to protein family HMM TIGR00282	gene	gene3896	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3938
BAA_3939	BAA_3939		BAA_3939	3588250	3589812	-	HDIG/HD/KH domain protein	identified by match to protein family HMM PF00013%3B match to protein family HMM PF01966%3B match to protein family HMM TIGR00277%3B match to protein family HMM TIGR03319	gene	gene3897	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3939
BAA_3940	BAA_3940		BAA_3940	3590295	3590720	-	recA protein%2C group I intron-containing	identified by match to protein family HMM PF00154	gene	gene3898	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3940
BAA_3941	BAA_3941	recA	recA	3591027	3591653	-	protein RecA	identified by match to protein family HMM PF00154%3B match to protein family HMM TIGR02012	gene	gene3899	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3941
BAA_3942	BAA_3942	cinA	cinA	3591798	3593036	-	competence/damage-inducible protein CinA	identified by match to protein family HMM PF00994%3B match to protein family HMM PF02464%3B match to protein family HMM TIGR00177%3B match to protein family HMM TIGR00199%3B match to protein family HMM TIGR00200	gene	gene3900	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3942
BAA_3943	BAA_3943	pgsA	pgsA	3593057	3593635	-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	identified by match to protein family HMM PF01066%3B match to protein family HMM TIGR00560	gene	gene3901	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3943
BAA_3944	BAA_3944		BAA_3944	3593699	3594610	-	conserved hypothetical protein		gene	gene3902	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3944
BAA_3945	BAA_3945		BAA_3945	3594632	3595417	-	ACT domain protein		gene	gene3903	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3945
BAA_3946	BAA_3946		BAA_3946	3595557	3595805	-	conserved hypothetical protein		gene	gene3904	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3946
BAA_3947	BAA_3947		BAA_3947	3595881	3596594	-	oxidoreductase%2C short-chain dehydrogenase/reductase family	identified by match to protein family HMM PF00106%3B match to protein family HMM PF01370%3B match to protein family HMM PF08659	gene	gene3905	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3947
BAA_3948	BAA_3948		BAA_3948	3596698	3597984	-	zinc protease%2C insulinase family	identified by match to protein family HMM PF00675%3B match to protein family HMM PF05193	gene	gene3906	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3948
BAA_3949	BAA_3949		BAA_3949	3597985	3599259	-	conserved hypothetical protein	identified by match to protein family HMM PF05193	gene	gene3907	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3949
BAA_3950	BAA_3950		BAA_3950	3599458	3600285	-		sugar ABC transporter%2C permease protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02653	pseudogene	gene3908	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3950
BAA_3951	BAA_3951		BAA_3951	3600417	3601166	-		sugar ABC transporter%2C permease protein%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF02653	pseudogene	gene3909	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3951
BAA_3952	BAA_3952		BAA_3952	3601194	3601475	-		ABC transporter%2C permease%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene3910	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3952
BAA_3953	BAA_3953		BAA_3953	3601468	3603000	-	sugar ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene3911	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3953
BAA_3954	BAA_3954		BAA_3954	3603109	3604176	-	lipoprotein%2C Bmp family	identified by match to protein family HMM PF02608	gene	gene3912	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3954
BAA_3955	BAA_3955		BAA_3955	3604266	3605006	-	transcriptional regulator%2C GntR family	identified by match to protein family HMM PF00392%3B match to protein family HMM PF07702	gene	gene3913	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3955
BAA_3957	BAA_3957		BAA_3957	3605529	3607910	-	stage III sporulation protein E	identified by match to protein family HMM PF01580%3B match to protein family HMM PF09397	gene	gene3914	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3957
BAA_3958	BAA_3958		BAA_3958	3608122	3608325	-	conserved hypothetical protein		gene	gene3915	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3958
BAA_3959	BAA_3959	clpP	clpP	3608322	3609071	-	clp protease	identified by match to protein family HMM PF00574	gene	gene3916	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3959
BAA_3960	BAA_3960		BAA_3960	3609176	3610846	-	metallo-beta-lactamase family protein	identified by match to protein family HMM PF00753%3B match to protein family HMM PF07521%3B match to protein family HMM TIGR00649	gene	gene3917	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3960
BAA_3961	BAA_3961	dapA2	dapA2	3611612	3612490	-	dihydrodipicolinate synthase	identified by match to protein family HMM PF00701%3B match to protein family HMM TIGR00674	gene	gene3918	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3961
BAA_3962	BAA_3962	dapG2	dapG2	3612502	3613734	-	aspartate kinase%2C monofunctional class	identified by match to protein family HMM PF00696%3B match to protein family HMM PF01842%3B match to protein family HMM TIGR00656%3B match to protein family HMM TIGR00657	gene	gene3919	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3962
BAA_3963	BAA_3963	asd2	asd2	3613758	3614804	-	aspartate-semialdehyde dehydrogenase	identified by match to protein family HMM PF01118%3B match to protein family HMM PF02774%3B match to protein family HMM TIGR01296	gene	gene3920	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3963
BAA_3964	BAA_3964	spoVFB	spoVFB	3614955	3615554	-	dipicolinate synthase%2C B subunit	identified by match to protein family HMM PF02441%3B match to protein family HMM TIGR02852	gene	gene3921	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3964
BAA_3965	BAA_3965	spoVFA	spoVFA	3615551	3616453	-	dipicolinate synthase%2C A subunit	identified by match to protein family HMM PF01262%3B match to protein family HMM PF01488%3B match to protein family HMM TIGR02853	gene	gene3922	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3965
BAA_3966	BAA_3966		BAA_3966	3616728	3616979	-	conserved hypothetical protein	identified by match to protein family HMM PF05239%3B match to protein family HMM TIGR02888	gene	gene3923	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3966
BAA_3967	BAA_3967		BAA_3967	3617106	3618347	-	zinc protease%2C insulinase family	identified by match to protein family HMM PF00675%3B match to protein family HMM PF05193	gene	gene3924	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3967
BAA_3968	BAA_3968		BAA_3968	3618434	3619333	-	putative polysaccharide deacetylase	identified by match to protein family HMM PF01522%3B match to protein family HMM TIGR02873	gene	gene3925	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3968
BAA_3969	BAA_3969	pnp	pnp	3619485	3621623	-	polyribonucleotide nucleotidyltransferase	identified by match to protein family HMM PF00013%3B match to protein family HMM PF00575%3B match to protein family HMM PF01138%3B match to protein family HMM PF03725%3B match to protein family HMM PF03726%3B match to protein family HMM TIGR03591	gene	gene3926	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3969
BAA_3970	BAA_3970	ribF	ribF	3622154	3623125	-	riboflavin biosynthesis protein RibF	identified by match to protein family HMM PF01687%3B match to protein family HMM PF06574%3B match to protein family HMM TIGR00083	gene	gene3927	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3970
BAA_3971	BAA_3971	truB	truB	3623169	3624092	-	tRNA pseudouridine synthase B	identified by match to protein family HMM PF01509%3B match to protein family HMM TIGR00431	gene	gene3928	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3971
BAA_3972	BAA_3972	rbfA	rbfA	3624179	3624535	-	ribosome-binding factor A	identified by match to protein family HMM PF02033%3B match to protein family HMM TIGR00082	gene	gene3929	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3972
BAA_3973	BAA_3973		BAA_3973	3624551	3624832	-	conserved hypothetical protein	identified by match to protein family HMM PF04456	gene	gene3930	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3973
BAA_3974	BAA_3974	infB	infB	3624829	3626889	-	translation initiation factor IF-2	identified by match to protein family HMM PF00009%3B match to protein family HMM PF01926%3B match to protein family HMM PF03144%3B match to protein family HMM PF04760%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00487	gene	gene3931	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3974
BAA_3975	BAA_3975		BAA_3975	3626894	3627205	-	ribosomal protein L7A family	identified by match to protein family HMM PF01248	gene	gene3932	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3975
BAA_3976	BAA_3976		BAA_3976	3627206	3627478	-	conserved hypothetical protein	identified by match to protein family HMM PF04296	gene	gene3933	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3976
BAA_3977	BAA_3977	nusA	nusA	3627490	3628596	-	N utilization substance protein A	identified by match to protein family HMM PF00575%3B match to protein family HMM PF08529%3B match to protein family HMM TIGR01953	gene	gene3934	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3977
BAA_3978	BAA_3978		BAA_3978	3628614	3629084	-	conserved hypothetical protein	identified by match to protein family HMM PF02576	gene	gene3935	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3978
BAA_3979	BAA_3979	polC	polC	3629417	3633718	-	DNA polymerase III%2C alpha subunit%2C Gram-positive type	identified by match to protein family HMM PF00929%3B match to protein family HMM PF01336%3B match to protein family HMM PF02811%3B match to protein family HMM PF07733%3B match to protein family HMM TIGR00573%3B match to protein family HMM TIGR01405	gene	gene3936	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3979
BAA_3980	BAA_3980	proS2	proS2	3633843	3635543	-	proline--tRNA ligase	identified by match to protein family HMM PF00587%3B match to protein family HMM PF03129%3B match to protein family HMM PF04073%3B match to protein family HMM TIGR00409	gene	gene3937	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3980
BAA_3981	BAA_3981	rasP	rasP	3635653	3636909	-	RIP metalloprotease RasP	identified by match to protein family HMM PF00595%3B match to protein family HMM PF02163%3B match to protein family HMM TIGR00054	gene	gene3938	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3981
BAA_3982	BAA_3982	dxr2	dxr2	3636926	3638068	-	1-deoxy-D-xylulose 5-phosphate reductoisomerase	identified by match to protein family HMM PF02670%3B match to protein family HMM PF08436%3B match to protein family HMM TIGR00243	gene	gene3939	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3982
BAA_3983	BAA_3983	cdsA	cdsA	3638092	3638883	-	phosphatidate cytidylyltransferase	identified by match to protein family HMM PF01148	gene	gene3940	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3983
BAA_3984	BAA_3984	uppS	uppS	3638901	3639677	-	undecaprenyl pyrophosphate synthetase 1	identified by match to protein family HMM PF01255%3B match to protein family HMM TIGR00055	gene	gene3941	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3984
BAA_3985	BAA_3985	frr	frr	3639763	3640320	-	ribosome recycling factor	identified by match to protein family HMM PF01765%3B match to protein family HMM TIGR00496	gene	gene3942	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3985
BAA_3986	BAA_3986	pyrH2	pyrH2	3640323	3641045	-	UMP kinase	identified by match to protein family HMM PF00696%3B match to protein family HMM TIGR02075	gene	gene3943	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3986
BAA_3987	BAA_3987	tsf	tsf	3641112	3641999	-	translation elongation factor Ts	identified by match to protein family HMM PF00627%3B match to protein family HMM PF00889%3B match to protein family HMM TIGR00116	gene	gene3944	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3987
BAA_3988	BAA_3988	rpsB	rpsB	3642103	3642804	-	30S ribosomal protein S2	identified by match to protein family HMM PF00318%3B match to protein family HMM TIGR01011	gene	gene3945	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3988
BAA_3989	BAA_3989	codY	codY	3643154	3643933	-	transcriptional regulator CodY	identified by match to protein family HMM PF06018%3B match to protein family HMM PF08222%3B match to protein family HMM PF08279%3B match to protein family HMM TIGR02787	gene	gene3946	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3989
BAA_3990	BAA_3990	hslU	hslU	3644011	3645402	-	ATP-dependent protease HslVU%2C ATPase subunit	identified by match to protein family HMM PF07724%3B match to protein family HMM TIGR00390	gene	gene3947	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3990
BAA_3991	BAA_3991	hslV	hslV	3645425	3645967	-	ATP-dependent protease HslVU%2C peptidase subunit	identified by match to protein family HMM PF00227%3B match to protein family HMM TIGR03692	gene	gene3948	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3991
BAA_3992	BAA_3992	xerC	xerC	3646010	3646909	-	tyrosine recombinase XerC	identified by match to protein family HMM PF00589%3B match to protein family HMM PF02899%3B match to protein family HMM TIGR02224	gene	gene3949	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3992
BAA_3993	BAA_3993	trmFO	trmFO	3646975	3648279	-	tRNA:m(5)U-54 methyltransferase	identified by match to protein family HMM PF01134%3B match to protein family HMM TIGR00137	gene	gene3950	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3993
BAA_3994	BAA_3994	topA	topA	3648330	3650408	-	DNA topoisomerase I	identified by match to protein family HMM PF01131%3B match to protein family HMM PF01396%3B match to protein family HMM PF01751%3B match to protein family HMM TIGR01051	gene	gene3951	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3994
BAA_3995	BAA_3995	smF	smF	3650756	3651421	-		DNA processing Smf protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02481	pseudogene	gene3952	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3995
BAA_3996	BAA_3996	sucD	sucD	3651509	3652411	-	succinate-CoA ligase (ADP-forming)%2C alpha subunit	identified by match to protein family HMM PF00549%3B match to protein family HMM PF02629%3B match to protein family HMM TIGR01019	gene	gene3953	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3996
BAA_3997	BAA_3997	sucC	sucC	3652432	3653592	-	succinate-CoA ligase (ADP-forming)%2C beta subunit	identified by match to protein family HMM PF00549%3B match to protein family HMM PF08442%3B match to protein family HMM TIGR01016	gene	gene3954	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3997
BAA_3998	BAA_3998	rnhB	rnhB	3653786	3654559	-	ribonuclease HII	identified by match to protein family HMM PF01351	gene	gene3955	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3998
BAA_3999	BAA_3999		BAA_3999	3654611	3655501	-	GTPase family protein	identified by match to protein family HMM PF01926%3B match to protein family HMM TIGR03596	gene	gene3956	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_3999
BAA_4000	BAA_4000	sipS2	sipS2	3655522	3656073	-	signal peptidase I S	identified by match to protein family HMM PF00717%3B match to protein family HMM TIGR02227	gene	gene3957	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4000
BAA_4001	BAA_4001	rplS	rplS	3656175	3656519	-	50S ribosomal protein L19	identified by match to protein family HMM PF01245%3B match to protein family HMM TIGR01024	gene	gene3958	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4001
BAA_4003	BAA_4003	trmD	trmD	3656666	3657400	-	tRNA (guanine-N1)-methyltransferase	identified by match to protein family HMM PF01746%3B match to protein family HMM TIGR00088	gene	gene3959	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4003
BAA_4004	BAA_4004	rimM	rimM	3657400	3657915	-	16S rRNA processing protein RimM	identified by match to protein family HMM PF01782%3B match to protein family HMM PF05239%3B match to protein family HMM TIGR02273	gene	gene3960	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4004
BAA_4005	BAA_4005		BAA_4005	3658036	3658263	-	KH domain protein		gene	gene3961	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4005
BAA_4006	BAA_4006	rpsP	rpsP	3658278	3658550	-	30S ribosomal protein S16	identified by match to protein family HMM PF00886%3B match to protein family HMM TIGR00002	gene	gene3962	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4006
BAA_4007	BAA_4007	ffh	ffh	3658651	3660000	-	signal recognition particle protein	identified by match to protein family HMM PF00448%3B match to protein family HMM PF02881%3B match to protein family HMM PF02978%3B match to protein family HMM TIGR00959	gene	gene3963	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4007
BAA_4008	BAA_4008		BAA_4008	3660013	3660345	-	conserved hypothetical protein	identified by match to protein family HMM PF04297%3B match to protein family HMM PF08281	gene	gene3964	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4008
BAA_4009	BAA_4009	ftsY	ftsY	3660478	3661467	-	signal recognition particle-docking protein FtsY	identified by match to protein family HMM PF00448%3B match to protein family HMM PF02881%3B match to protein family HMM TIGR00064	gene	gene3965	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4009
BAA_4010	BAA_4010	smC	smC	3661483	3665052	-	chromosome segregation SMC protein	identified by match to protein family HMM PF02463%3B match to protein family HMM PF06470%3B match to protein family HMM TIGR02168	gene	gene3966	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4010
BAA_4011	BAA_4011	rncS	rncS	3665199	3665936	-	ribonuclease III	identified by match to protein family HMM PF00035%3B match to protein family HMM PF00636%3B match to protein family HMM TIGR02191	gene	gene3967	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4011
BAA_4012	BAA_4012	acpP	acpP	3665995	3666228	-	acyl carrier protein	identified by match to protein family HMM PF00550%3B match to protein family HMM TIGR00517	gene	gene3968	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4012
BAA_4013	BAA_4013	fabG	fabG	3666298	3667038	-	3-oxoacyl-(acyl-carrier-protein) reductase	identified by match to protein family HMM PF00106%3B match to protein family HMM PF08659%3B match to protein family HMM TIGR01830	gene	gene3969	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4013
BAA_4014	BAA_4014	fabD	fabD	3667038	3667982	-	malonyl CoA-acyl carrier protein transacylase	identified by match to protein family HMM PF00698%3B match to protein family HMM TIGR00128	gene	gene3970	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4014
BAA_4015	BAA_4015	plsX	plsX	3667997	3668989	-	fatty acid/phospholipid synthesis protein PlsX	identified by match to protein family HMM PF02504%3B match to protein family HMM TIGR00182	gene	gene3971	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4015
BAA_4016	BAA_4016		BAA_4016	3668986	3669579	-	conserved hypothetical protein		gene	gene3972	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4016
BAA_4017	BAA_4017	recG	recG	3669668	3671716	-	ATP-dependent DNA helicase RecG	identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF01336%3B match to protein family HMM TIGR00643	gene	gene3973	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4017
BAA_4018	BAA_4018		BAA_4018	3672006	3673682	-	putative phosphatase	identified by match to protein family HMM PF02734%3B match to protein family HMM TIGR03599	gene	gene3974	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4018
BAA_4019	BAA_4019		BAA_4019	3673705	3674067	-	conserved hypothetical protein	identified by match to protein family HMM PF03780	gene	gene3975	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4019
BAA_4020	BAA_4020	rpmB	rpmB	3674446	3674634	+	50S ribosomal protein L28	identified by match to protein family HMM PF00830%3B match to protein family HMM TIGR00009	gene	gene3976	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4020
BAA_4021	BAA_4021		BAA_4021	3674854	3675495	-	thiamine diphosphokinase	identified by match to protein family HMM PF04263%3B match to protein family HMM PF04265%3B match to protein family HMM TIGR01378	gene	gene3977	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4021
BAA_4022	BAA_4022	rpe	rpe	3675634	3676278	-	ribulose-phosphate 3-epimerase	identified by match to protein family HMM PF00834%3B match to protein family HMM TIGR01163	gene	gene3978	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4022
BAA_4023	BAA_4023	rsgA_2	rsgA_2	3676281	3677162	-	ribosome small subunit-dependent GTPase A	identified by match to protein family HMM PF03193%3B match to protein family HMM TIGR00157	gene	gene3979	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4023
BAA_4024	BAA_4024		BAA_4024	3677431	3679404	-	non-specific serine/threonine protein kinase	identified by match to protein family HMM PF00069%3B match to protein family HMM PF03793%3B match to protein family HMM PF07714	gene	gene3980	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4024
BAA_4025	BAA_4025		BAA_4025	3679413	3680165	-	protein phosphatase 2C%2C family protein	identified by match to protein family HMM PF00481	gene	gene3981	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4025
BAA_4026	BAA_4026		BAA_4026	3680170	3681258	-	conserved hypothetical protein TIGR00048	identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR00048	gene	gene3982	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4026
BAA_4027	BAA_4027	sun	sun	3681263	3682597	-	ribosomal RNA small subunit methyltransferase B	identified by match to protein family HMM PF01029%3B match to protein family HMM PF01189%3B match to protein family HMM TIGR00563	gene	gene3983	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4027
BAA_4028	BAA_4028	fmt	fmt	3682594	3683538	-	methionyl-tRNA formyltransferase	identified by match to protein family HMM PF00551%3B match to protein family HMM PF02911%3B match to protein family HMM TIGR00460	gene	gene3984	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4028
BAA_4029	BAA_4029	def1	def1	3683562	3684032	-	peptide deformylase	identified by match to protein family HMM PF01327%3B match to protein family HMM TIGR00079	gene	gene3985	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4029
BAA_4030	BAA_4030	priA	priA	3684044	3686449	-	primosomal protein N'	identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF04851%3B match to protein family HMM TIGR00595	gene	gene3986	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4030
BAA_4031	BAA_4031	coaBC	coaBC	3686446	3687651	-	phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase	identified by match to protein family HMM PF02441%3B match to protein family HMM PF04127%3B match to protein family HMM TIGR00521	gene	gene3987	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4031
BAA_4032	BAA_4032	rpoZ	rpoZ	3687824	3688036	-	DNA-directed RNA polymerase%2C omega subunit	identified by match to protein family HMM PF01192%3B match to protein family HMM TIGR00690	gene	gene3988	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4032
BAA_4033	BAA_4033		BAA_4033	3688039	3688656	-	putative guanylate kinase	identified by match to protein family HMM PF00625%3B match to protein family HMM TIGR03263	gene	gene3989	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4033
BAA_4034	BAA_4034		BAA_4034	3688670	3688933	-	conserved hypothetical protein	identified by match to protein family HMM PF04025	gene	gene3990	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4034
BAA_4035	BAA_4035		BAA_4035	3689001	3689876	-	conserved hypothetical protein TIGR00255	identified by match to protein family HMM PF03755%3B match to protein family HMM PF08340%3B match to protein family HMM TIGR00255	gene	gene3991	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4035
BAA_4036	BAA_4036		BAA_4036	3689977	3692697	-	cation-transporting ATPase%2C E1-E2 family	identified by match to protein family HMM PF00122%3B match to protein family HMM PF00689%3B match to protein family HMM PF00690%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494	gene	gene3992	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4036
BAA_4037	BAA_4037		BAA_4037	3692803	3694512	+	putative fibronectin-binding protein	identified by match to protein family HMM PF05670%3B match to protein family HMM PF05833	gene	gene3993	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4037
BAA_4038	BAA_4038		BAA_4038	3694840	3695910	+	putative X-Pro dipeptidase	identified by match to protein family HMM PF00557%3B match to protein family HMM PF01321	gene	gene3994	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4038
BAA_4039	BAA_4039		BAA_4039	3696030	3696398	-	putative membrane protein		gene	gene3995	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4039
BAA_4040	BAA_4040		BAA_4040	3696414	3696779	-	conserved hypothetical protein		gene	gene3996	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4040
BAA_4041	BAA_4041		BAA_4041	3696946	3698331	+	putative membrane protein		gene	gene3997	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4041
BAA_4042	BAA_4042		BAA_4042	3698498	3698752	+	conserved hypothetical protein		gene	gene3998	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4042
BAA_4043	BAA_4043		BAA_4043	3698775	3699086	+		hydrolase%2C haloacid dehalogenase-like family%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene3999	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4043
BAA_4044	BAA_4044	pyrE	pyrE	3699494	3700126	-	orotate phosphoribosyltransferase	identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR00336	gene	gene4000	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4044
BAA_4045	BAA_4045	pyrF	pyrF	3700123	3700839	-	orotidine 5'-phosphate decarboxylase	identified by match to protein family HMM PF00215%3B match to protein family HMM TIGR01740	gene	gene4001	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4045
BAA_4046	BAA_4046	pyrD	pyrD	3700824	3701753	-	dihydroorotate oxidase	identified by match to protein family HMM PF01180%3B match to protein family HMM TIGR01037	gene	gene4002	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4046
BAA_4047	BAA_4047	pyrK	pyrK	3701750	3702529	-	dihydroorotate dehydrogenase%2C electron transfer subunit	identified by match to protein family HMM PF00175%3B match to protein family HMM PF00970	gene	gene4003	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4047
BAA_4048	BAA_4048	carB	carB	3702526	3705744	-	carbamoyl-phosphate synthase%2C large subunit	identified by match to protein family HMM PF00289%3B match to protein family HMM PF01071%3B match to protein family HMM PF02142%3B match to protein family HMM PF02655%3B match to protein family HMM PF02786%3B match to protein family HMM PF02787%3B match to protein family HMM PF08443%3B match to protein family HMM TIGR01369	gene	gene4004	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4048
BAA_4049	BAA_4049		BAA_4049	3705729	3706826	-	carbamoyl-phosphate synthase%2C small subunit	identified by match to protein family HMM PF00117%3B match to protein family HMM PF00988%3B match to protein family HMM TIGR01368	gene	gene4005	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4049
BAA_4050	BAA_4050	pyrC	pyrC	3706823	3708109	-	dihydroorotase	identified by match to protein family HMM PF01979%3B match to protein family HMM PF07969%3B match to protein family HMM TIGR00857	gene	gene4006	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4050
BAA_4051	BAA_4051	pyrB	pyrB	3708093	3709007	-	aspartate carbamoyltransferase	identified by match to protein family HMM PF00185%3B match to protein family HMM PF02729%3B match to protein family HMM TIGR00670	gene	gene4007	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4051
BAA_4053	BAA_4053	uraA	uraA	3709156	3710439	-	uracil permease	identified by match to protein family HMM PF00860%3B match to protein family HMM TIGR00801	gene	gene4008	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4053
BAA_4055	BAA_4055	pyrR	pyrR	3710586	3711128	-	pyrimidine operon regulatory protein	identified by match to protein family HMM PF00156	gene	gene4009	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4055
BAA_4057	BAA_4057		BAA_4057	3711331	3712239	-	ribosomal large subunit pseudouridine synthase%2C RluA family	identified by match to protein family HMM PF00849%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00005	gene	gene4010	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4057
BAA_4058	BAA_4058	lspA	lspA	3712244	3712702	-	signal peptidase II	identified by match to protein family HMM PF01252%3B match to protein family HMM TIGR00077	gene	gene4011	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4058
BAA_4059	BAA_4059		BAA_4059	3712827	3713156	-	conserved hypothetical protein		gene	gene4012	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4059
BAA_4060	BAA_4060	ileS2	ileS2	3713312	3716077	-	isoleucine--tRNA ligase	identified by match to protein family HMM PF00133%3B match to protein family HMM PF06827%3B match to protein family HMM PF08264%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00392	gene	gene4013	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4060
BAA_4061	BAA_4061	divIVA	divIVA	3716425	3716931	-	cell-division initiation protein DivIVA	identified by match to protein family HMM PF05103%3B match to protein family HMM TIGR03544	gene	gene4014	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4061
BAA_4062	BAA_4062		BAA_4062	3717021	3717788	-	S4 domain protein	identified by match to protein family HMM PF01479	gene	gene4015	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4062
BAA_4063	BAA_4063		BAA_4063	3717804	3718067	-	ylmG protein	identified by match to protein family HMM PF02325	gene	gene4016	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4063
BAA_4064	BAA_4064		BAA_4064	3718074	3718544	-	ylmF protein	identified by match to protein family HMM PF04472	gene	gene4017	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4064
BAA_4065	BAA_4065		BAA_4065	3718564	3719238	-	conserved hypothetical protein TIGR00044	identified by match to protein family HMM PF01168%3B match to protein family HMM TIGR00044	gene	gene4018	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4065
BAA_4066	BAA_4066		BAA_4066	3719235	3720053	-	conserved hypothetical protein TIGR00726	identified by match to protein family HMM PF02578%3B match to protein family HMM TIGR00726	gene	gene4019	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4066
BAA_4067	BAA_4067		BAA_4067	3720170	3720454	-	conserved hypothetical protein	identified by match to protein family HMM PF05239%3B match to protein family HMM TIGR02888	gene	gene4020	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4067
BAA_4068	BAA_4068	sigG	sigG	3720623	3721402	-	RNA polymerase sigma-G factor	identified by match to protein family HMM PF04539%3B match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM TIGR02850%3B match to protein family HMM TIGR02937%3B match to protein family HMM TIGR02980	gene	gene4021	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4068
BAA_4069	BAA_4069	sigE	sigE	3721560	3722279	-	RNA polymerase sigma-29 factor	identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM TIGR02835%3B match to protein family HMM TIGR02937	gene	gene4022	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4069
BAA_4070	BAA_4070	spoIIGA	spoIIGA	3722299	3723264	-	sporulation sigma-E factor processing peptidase	identified by match to protein family HMM PF03419%3B match to protein family HMM TIGR02854	gene	gene4023	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4070
BAA_4071	BAA_4071	ftsZ	ftsZ	3723529	3724689	-	cell division protein FtsZ	identified by match to protein family HMM PF00091%3B match to protein family HMM PF03953%3B match to protein family HMM TIGR00065	gene	gene4024	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4071
BAA_4072	BAA_4072	ftsA	ftsA	3724729	3726030	-	cell division protein FtsA	identified by match to protein family HMM PF02491%3B match to protein family HMM TIGR01174	gene	gene4025	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4072
BAA_4073	BAA_4073		BAA_4073	3726403	3727200	-	cell division protein FtsQ	identified by match to protein family HMM PF03799%3B match to protein family HMM PF08478	gene	gene4026	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4073
BAA_4074	BAA_4074	murB1	murB1	3727299	3728204	-	UDP-N-acetylmuramate dehydrogenase	identified by match to protein family HMM PF01565%3B match to protein family HMM PF02873%3B match to protein family HMM TIGR00179	gene	gene4027	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4074
BAA_4075	BAA_4075	murG1	murG1	3728266	3729417	-	undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase	identified by match to protein family HMM PF03033%3B match to protein family HMM PF04101%3B match to protein family HMM TIGR01133	gene	gene4028	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4075
BAA_4076	BAA_4076	spoVE	spoVE	3729466	3730557	-	stage V sporulation protein E	identified by match to protein family HMM PF01098%3B match to protein family HMM TIGR02614%3B match to protein family HMM TIGR02615	gene	gene4029	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4076
BAA_4077	BAA_4077	murD	murD	3730648	3732000	-	UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	identified by match to protein family HMM PF02875%3B match to protein family HMM PF08245%3B match to protein family HMM TIGR01087	gene	gene4030	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4077
BAA_4078	BAA_4078	mraY	mraY	3732001	3732975	-	phospho-N-acetylmuramoyl-pentapeptide-transferase	identified by match to protein family HMM PF00953%3B match to protein family HMM TIGR00445	gene	gene4031	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4078
BAA_4079	BAA_4079	murE	murE	3732998	3734473	-	UDP-N-acetylmuramoylalanyl-D-glutamyl-2%2C6-diaminopimelate ligase	identified by match to protein family HMM PF01225%3B match to protein family HMM PF02875%3B match to protein family HMM PF08245%3B match to protein family HMM TIGR01085	gene	gene4032	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4079
BAA_4080	BAA_4080		BAA_4080	3734682	3736598	-	sporulation specific penicillin-binding protein	identified by match to protein family HMM PF00905%3B match to protein family HMM PF03717%3B match to protein family HMM PF03793%3B match to protein family HMM TIGR02214	gene	gene4033	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4080
BAA_4081	BAA_4081		BAA_4081	3736680	3738830	-	penicillin-binding protein	identified by match to protein family HMM PF00905%3B match to protein family HMM PF03717%3B match to protein family HMM PF03793	gene	gene4034	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4081
BAA_4082	BAA_4082	ftsL	ftsL	3738852	3739214	-	cell division protein FtsL	identified by match to protein family HMM PF04977%3B match to protein family HMM TIGR02209	gene	gene4035	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4082
BAA_4083	BAA_4083	mraW	mraW	3739230	3740162	-	S-adenosyl-methyltransferase MraW	identified by match to protein family HMM PF01795%3B match to protein family HMM TIGR00006	gene	gene4036	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4083
BAA_4084	BAA_4084		BAA_4084	3740533	3742149	-	conserved hypothetical protein		gene	gene4037	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4084
BAA_4085	BAA_4085	panE2	panE2	3742229	3743119	-	2-dehydropantoate 2-reductase	identified by match to protein family HMM PF02558%3B match to protein family HMM PF08546%3B match to protein family HMM TIGR00745	gene	gene4038	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4085
BAA_4086	BAA_4086		BAA_4086	3743690	3744163	+	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene4039	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4086
BAA_4087	BAA_4087		BAA_4087	3744198	3744704	-	putative DNA-binding protein	identified by match to protein family HMM PF00249%3B match to protein family HMM TIGR02894	gene	gene4040	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4087
BAA_4088	BAA_4088	rpmF	rpmF	3744833	3745006	-	50S ribosomal protein L32	identified by match to protein family HMM PF01783%3B match to protein family HMM TIGR01031	gene	gene4041	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4088
BAA_4089	BAA_4089		BAA_4089	3745068	3745568	-	conserved hypothetical protein	identified by match to protein family HMM PF02620	gene	gene4042	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4089
BAA_4090	BAA_4090		BAA_4090	3745985	3746581	+	putative prophage LambdaBa02%2C lipoprotein		gene	gene4043	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4090
BAA_4091	BAA_4091		BAA_4091	3746614	3747201	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4044	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4091
BAA_4092	BAA_4092		BAA_4092	3747179	3748360	-	prophage LambdaBa02%2C FtsK/SpoIIIE family protein	identified by match to protein family HMM PF01580	gene	gene4045	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4092
BAA_4093	BAA_4093		BAA_4093	3748476	3748658	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4046	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4093
BAA_4094	BAA_4094		BAA_4094	3748661	3748897	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4047	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4094
BAA_4095	BAA_4095		BAA_4095	3749147	3749353	+	prophage LambdaBa02%2C repressor protein	identified by match to protein family HMM PF01381	gene	gene4048	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4095
BAA_4096	BAA_4096		BAA_4096	3749357	3749539	+	hypothetical protein	identified by glimmer%3B putative	gene	gene4049	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4096
BAA_4097	BAA_4097		BAA_4097	3749545	3750126	+	conserved domain protein		gene	gene4050	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4097
BAA_4098	BAA_4098		BAA_4098	3750190	3750894	-	prophage LambdaBa02%2C N-acetylmuramoyl-L-alanine amidase PlyL	identified by match to protein family HMM PF01510	gene	gene4051	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4098
BAA_4099	BAA_4099		BAA_4099	3750894	3751319	-	putative prophage LambdaBa02%2C holin	identified by match to protein family HMM PF05105%3B match to protein family HMM TIGR01593	gene	gene4052	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4099
BAA_4100	BAA_4100		BAA_4100	3751324	3752292	-	prophage LambdaBa02%2C site-specific recombinase%2C phage integrase family	identified by match to protein family HMM PF00589	gene	gene4053	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4100
BAA_4101	BAA_4101		BAA_4101	3752448	3752723	-	prophage LambdaBa02%2C transcriptional regulator%2C AbrB family		gene	gene4054	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4101
BAA_4102	BAA_4102		BAA_4102	3752748	3754826	-	conserved hypothetical protein		gene	gene4055	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4102
BAA_4103	BAA_4103		BAA_4103	3754850	3756832	-	phage minor structural protein	identified by match to protein family HMM TIGR01665	gene	gene4056	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4103
BAA_4104	BAA_4104		BAA_4104	3756829	3758310	-	conserved hypothetical protein	identified by match to protein family HMM TIGR01633	gene	gene4057	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4104
BAA_4105	BAA_4105		BAA_4105	3758347	3758958	-		hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by glimmer%3B putative	pseudogene	gene4058	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4105
BAA_4106	BAA_4106		BAA_4106	3759024	3760376	-	conserved domain protein		gene	gene4059	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4106
BAA_4107	BAA_4107		BAA_4107	3760481	3763360	-		putative prophage LambdaBa02%2C tape measure protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM TIGR01760	pseudogene	gene4060	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4107
BAA_4108	BAA_4108		BAA_4108	3763376	3763516	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4061	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4108
BAA_4109	BAA_4109		BAA_4109	3763518	3763928	-	conserved hypothetical protein		gene	gene4062	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4109
BAA_4110	BAA_4110		BAA_4110	3763988	3764572	-	putative prophage LambdaBa02%2C major tail protein	identified by match to protein family HMM TIGR01603	gene	gene4063	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4110
BAA_4111	BAA_4111		BAA_4111	3764586	3764945	-	conserved hypothetical protein		gene	gene4064	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4111
BAA_4112	BAA_4112		BAA_4112	3764942	3765379	-	conserved hypothetical protein	identified by match to protein family HMM TIGR01725	gene	gene4065	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4112
BAA_4113	BAA_4113		BAA_4113	3765415	3765699	+	hypothetical protein	identified by glimmer%3B putative	gene	gene4066	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4113
BAA_4114	BAA_4114		BAA_4114	3765701	3765976	-	conserved hypothetical protein		gene	gene4067	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4114
BAA_4115	BAA_4115		BAA_4115	3765985	3766185	-	conserved domain protein		gene	gene4068	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4115
BAA_4116	BAA_4116		BAA_4116	3766262	3767449	-	putative prophage LambdaBa02%2C major capsid protein	identified by match to protein family HMM PF05065	gene	gene4069	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4116
BAA_4117	BAA_4117		BAA_4117	3767446	3768168	-	prophage LambdaBa02%2C Clp protease family protein	identified by match to protein family HMM PF00574	gene	gene4070	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4117
BAA_4118	BAA_4118		BAA_4118	3768179	3769348	-	conserved hypothetical protein	identified by match to protein family HMM PF04860%3B match to protein family HMM TIGR01537	gene	gene4071	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4118
BAA_4119	BAA_4119		BAA_4119	3769409	3771181	-	putative prophage LambdaBa02%2C terminase%2C large subunit	identified by match to protein family HMM PF03354	gene	gene4072	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4119
BAA_4120	BAA_4120		BAA_4120	3771162	3771542	-	conserved hypothetical protein	identified by match to protein family HMM PF05119%3B match to protein family HMM TIGR01558	gene	gene4073	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4120
BAA_4121	BAA_4121		BAA_4121	3771704	3771919	-	prophage LambdaBa02%2C HNH endonuclease family protein		gene	gene4074	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4121
BAA_4122	BAA_4122		BAA_4122	3772059	3772274	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4075	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4122
BAA_4123	BAA_4123		BAA_4123	3772662	3773483	-	conserved domain protein		gene	gene4076	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4123
BAA_4124	BAA_4124		BAA_4124	3773757	3774299	-	prophage LambdaBa02%2C site-specific recombinase%2C phage integrase family	identified by match to protein family HMM PF00589	gene	gene4077	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4124
BAA_4125	BAA_4125		BAA_4125	3774296	3774766	-	conserved hypothetical protein	identified by match to protein family HMM TIGR01637	gene	gene4078	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4125
BAA_4126	BAA_4126		BAA_4126	3774787	3774957	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4079	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4126
BAA_4127	BAA_4127		BAA_4127	3775072	3775185	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4080	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4127
BAA_4128	BAA_4128		BAA_4128	3775212	3775484	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4081	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4128
BAA_4129	BAA_4129		BAA_4129	3775575	3775931	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4082	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4129
BAA_4130	BAA_4130		BAA_4130	3776317	3776595	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4083	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4130
BAA_4131	BAA_4131		BAA_4131	3776632	3776838	-	conserved hypothetical protein		gene	gene4084	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4131
BAA_4132	BAA_4132		BAA_4132	3777583	3778089	-	conserved domain protein		gene	gene4085	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4132
BAA_4133	BAA_4133	fosB2	fosB2	3778426	3778845	+	metallothiol transferase fosB2	identified by match to protein family HMM PF00903	gene	gene4086	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4133
BAA_4134	BAA_4134		BAA_4134	3778892	3779302	-	conserved hypothetical protein		gene	gene4087	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4134
BAA_4135	BAA_4135		BAA_4135	3779469	3779699	-	putative prophage LambdaBa02%2C membrane protein		gene	gene4088	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4135
BAA_4136	BAA_4136	dut	dut	3779725	3780171	-	prophage LambdaBa02%2C deoxyuridine 5'-triphosphate nucleotidohydrolase	identified by match to protein family HMM PF00692%3B match to protein family HMM TIGR00576	gene	gene4089	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4136
BAA_4137	BAA_4137		BAA_4137	3780238	3780432	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4090	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4137
BAA_4138	BAA_4138		BAA_4138	3780416	3780559	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4091	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4138
BAA_4139	BAA_4139		BAA_4139	3780568	3781512	-	putative prophage LambdaBa02%2C RNA polymerase sigma-F factor	identified by match to protein family HMM PF04542%3B match to protein family HMM TIGR02937	gene	gene4092	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4139
BAA_4140	BAA_4140		BAA_4140	3781551	3781838	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4093	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4140
BAA_4141	BAA_4141		BAA_4141	3781851	3782105	-	phage protein		gene	gene4094	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4141
BAA_4142	BAA_4142		BAA_4142	3782120	3782293	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4095	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4142
BAA_4143	BAA_4143		BAA_4143	3782319	3782513	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4096	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4143
BAA_4144	BAA_4144		BAA_4144	3782529	3783320	-	putative prophage LambdaBa02%2C DNA replication protein DnaC	identified by match to protein family HMM PF01695	gene	gene4097	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4144
BAA_4145	BAA_4145		BAA_4145	3783301	3784017	-	prophage LambdaBa02%2C DNA replication protein	identified by match to protein family HMM PF04271%3B match to protein family HMM TIGR01446	gene	gene4098	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4145
BAA_4146	BAA_4146		BAA_4146	3784022	3784198	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4099	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4146
BAA_4147	BAA_4147		BAA_4147	3784228	3784392	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4100	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4147
BAA_4148	BAA_4148		BAA_4148	3784449	3784649	-	putative prophage LambdaBa02%2C DNA-binding protein		gene	gene4101	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4148
BAA_4149	BAA_4149		BAA_4149	3784701	3784928	-	prophage LambdaBa02%2C DNA-binding protein	identified by match to protein family HMM PF01381	gene	gene4102	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4149
BAA_4150	BAA_4150		BAA_4150	3785148	3785516	+	prophage LambdaBa02%2C repressor protein	identified by match to protein family HMM PF01381	gene	gene4103	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4150
BAA_4151	BAA_4151		BAA_4151	3785560	3785676	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4104	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4151
BAA_4152	BAA_4152		BAA_4152	3785778	3785927	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4105	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4152
BAA_4153	BAA_4153		BAA_4153	3785940	3787037	-	conserved domain protein		gene	gene4106	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4153
BAA_4154	BAA_4154		BAA_4154	3787907	3788041	-		hypothetical protein%3B this region contains one or more premature stops and/or frameshifts%3Bidentified by glimmer%3B putative	pseudogene	gene4107	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4154
BAA_4155	BAA_4155		BAA_4155	3788044	3788232	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4108	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4155
BAA_4156	BAA_4156		BAA_4156	3788254	3788403	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4109	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4156
BAA_4157	BAA_4157		BAA_4157	3788565	3789695	+	prophage LambdaBa02%2C site-specific recombinase%2C phage integrase family	identified by match to protein family HMM PF00589	gene	gene4110	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4157
BAA_4158	BAA_4158		BAA_4158	3789888	3791069	+	conserved hypothetical protein	identified by match to protein family HMM PF05636	gene	gene4111	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4158
BAA_4159	BAA_4159		BAA_4159	3791099	3792121	-	PDZ domain protein	identified by match to protein family HMM PF05362	gene	gene4112	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4159
BAA_4160	BAA_4160		BAA_4160	3792114	3792905	-	phospholipase%2C patatin family	identified by match to protein family HMM PF01734	gene	gene4113	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4160
BAA_4161	BAA_4161	coaD	coaD	3794240	3794731	-	pantetheine-phosphate adenylyltransferase	identified by match to protein family HMM PF01467%3B match to protein family HMM PF08218%3B match to protein family HMM TIGR00125%3B match to protein family HMM TIGR01510	gene	gene4115	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4161
BAA_4162	BAA_4162		BAA_4162	3793019	3794248	+	putative membrane protein	identified by match to protein family HMM PF07670%3B match to protein family HMM TIGR02871	gene	gene4114	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4162
BAA_4163	BAA_4163		BAA_4163	3794728	3795294	-	RNA methyltransferase%2C RsmD family	identified by match to protein family HMM PF03602%3B match to protein family HMM TIGR00095	gene	gene4116	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4163
BAA_4165	BAA_4165		BAA_4165	3795807	3795953	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene4117	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4165
BAA_4166	BAA_4166		BAA_4166	3795935	3796195	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene4118	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4166
BAA_4167	BAA_4167		BAA_4167	3796248	3796388	-	conserved hypothetical protein		gene	gene4119	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4167
BAA_4168	BAA_4168	ylbF	ylbF	3796641	3797093	-	ComK regulator	identified by match to protein family HMM PF07050	gene	gene4120	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4168
BAA_4169	BAA_4169		BAA_4169	3797210	3797788	-	phosphoglycerate mutase family protein	identified by match to protein family HMM PF00300	gene	gene4121	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4169
BAA_4170	BAA_4170		BAA_4170	3797865	3798110	-	conserved hypothetical protein		gene	gene4122	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4170
BAA_4171	BAA_4171		BAA_4171	3798122	3798559	-	conserved hypothetical protein		gene	gene4123	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4171
BAA_4172	BAA_4172		BAA_4172	3798705	3799739	-	conserved hypothetical protein	identified by match to protein family HMM PF00188	gene	gene4124	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4172
BAA_4173	BAA_4173		BAA_4173	3799946	3800311	+	conserved hypothetical protein	identified by match to protein family HMM PF08868	gene	gene4125	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4173
BAA_4174	BAA_4174		BAA_4174	3800358	3801356	-	hydrolase%2C carbon-nitrogen family	identified by match to protein family HMM PF00795	gene	gene4126	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4174
BAA_4175	BAA_4175		BAA_4175	3801583	3802488	-	putative membrane protein	identified by match to protein family HMM PF09678%3B match to protein family HMM TIGR02737	gene	gene4127	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4175
BAA_4176	BAA_4176	ctaF	ctaF	3802574	3802906	-	cytochrome c oxidase%2C subunit IVB	identified by match to protein family HMM PF03626%3B match to protein family HMM TIGR02908	gene	gene4128	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4176
BAA_4177	BAA_4177	ctaE	ctaE	3802910	3803533	-	cytochrome c oxidase%2C subunit III	identified by match to protein family HMM PF00510	gene	gene4129	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4177
BAA_4178	BAA_4178	ctaD	ctaD	3803533	3805395	-	cytochrome c oxidase%2C subunit I	identified by match to protein family HMM PF00115%3B match to protein family HMM TIGR02891	gene	gene4130	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4178
BAA_4179	BAA_4179	ctaC	ctaC	3805429	3806478	-	cytochrome c oxidase%2C subunit II	identified by match to protein family HMM PF00034%3B match to protein family HMM PF00116%3B match to protein family HMM PF02790%3B match to protein family HMM TIGR02866	gene	gene4131	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4179
BAA_4180	BAA_4180		BAA_4180	3806572	3807495	-	protoheme IX farnesyltransferase	identified by match to protein family HMM PF01040%3B match to protein family HMM TIGR01473	gene	gene4132	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4180
BAA_4181	BAA_4181	ctaA	ctaA	3807994	3808929	+	cytochrome aa3 controlling protein	identified by match to protein family HMM PF02628	gene	gene4133	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4181
BAA_4182	BAA_4182	pyc	pyc	3809007	3812453	-	pyruvate carboxylase	identified by match to protein family HMM PF00289%3B match to protein family HMM PF00364%3B match to protein family HMM PF00682%3B match to protein family HMM PF02222%3B match to protein family HMM PF02436%3B match to protein family HMM PF02785%3B match to protein family HMM PF02786%3B match to protein family HMM PF08443%3B match to protein family HMM TIGR01235	gene	gene4134	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4182
BAA_4183	BAA_4183		BAA_4183	3812777	3813961	-	cell division protein%2CFtsW/RodA/SpoVE family	identified by match to protein family HMM PF01098	gene	gene4135	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4183
BAA_4184	BAA_4184		BAA_4184	3814087	3814374	-	conserved hypothetical protein	identified by match to protein family HMM PF07408	gene	gene4136	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4184
BAA_4185	BAA_4185		BAA_4185	3814525	3815022	+	conserved hypothetical protein		gene	gene4137	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4185
BAA_4186	BAA_4186		BAA_4186	3815054	3816382	-	PhoH family protein	identified by match to protein family HMM PF02562	gene	gene4138	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4186
BAA_4187	BAA_4187		BAA_4187	3816631	3817086	-	conserved hypothetical protein	identified by match to protein family HMM PF01243	gene	gene4139	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4187
BAA_4188	BAA_4188		BAA_4188	3817247	3817432	+	conserved hypothetical protein		gene	gene4140	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4188
BAA_4189	BAA_4189		BAA_4189	3817468	3817743	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4141	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4189
BAA_4190	BAA_4190		BAA_4190	3817758	3818060	-	conserved hypothetical protein		gene	gene4142	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4190
BAA_4191	BAA_4191	typA	typA	3818216	3820060	-	GTP-binding protein TypA	identified by match to protein family HMM PF00009%3B match to protein family HMM PF00679%3B match to protein family HMM PF03144%3B match to protein family HMM PF08477%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR01394	gene	gene4143	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4191
BAA_4192	BAA_4192		BAA_4192	3820201	3820380	+	hypothetical protein	identified by glimmer%3B putative	gene	gene4144	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4192
BAA_4193	BAA_4193		BAA_4193	3820425	3821216	-	inositol monophosphatase family protein	identified by match to protein family HMM PF00459	gene	gene4145	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4193
BAA_4194	BAA_4194		BAA_4194	3821305	3821493	-	conserved hypothetical protein		gene	gene4146	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4194
BAA_4195	BAA_4195		BAA_4195	3821699	3822325	+	conserved hypothetical protein	identified by match to protein family HMM PF06335	gene	gene4147	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4195
BAA_4196	BAA_4196		BAA_4196	3822407	3822676	-	conserved hypothetical protein	identified by match to protein family HMM PF05256	gene	gene4148	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4196
BAA_4197	BAA_4197	speA	speA	3823043	3824515	+	arginine 2-monooxygenase	identified by match to protein family HMM PF01212%3B match to protein family HMM PF01276%3B match to protein family HMM PF03711	gene	gene4149	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4197
BAA_4198	BAA_4198		BAA_4198	3824590	3825420	+	protein-glutamine gamma-glutamyltransferase		gene	gene4150	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4198
BAA_4199	BAA_4199		BAA_4199	3825454	3825582	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4151	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4199
BAA_4200	BAA_4200		BAA_4200	3825628	3825756	-	conserved hypothetical protein		gene	gene4152	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4200
BAA_4201	BAA_4201		BAA_4201	3825816	3825944	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4153	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4201
BAA_4202	BAA_4202		BAA_4202	3826140	3826436	-	conserved hypothetical protein		gene	gene4154	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4202
BAA_4203	BAA_4203		BAA_4203	3826564	3826956	+	hypothetical protein	identified by glimmer%3B putative	gene	gene4155	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4203
BAA_4204	BAA_4204	pdhD	pdhD	3827423	3828835	-	pyruvate dehydrogenase complex E3 component%2C dihydrolipoamide dehydrogenase	identified by match to protein family HMM PF00070%3B match to protein family HMM PF02852%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR01350	gene	gene4156	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4204
BAA_4205	BAA_4205	pdhC	pdhC	3828841	3830100	-	pyruvate dehydrogenase complex E2 component%2C dihydrolipoyllysine-residue acetyltransferase	identified by match to protein family HMM PF00198%3B match to protein family HMM PF00364%3B match to protein family HMM PF02817	gene	gene4157	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4205
BAA_4206	BAA_4206	pdhB	pdhB	3830193	3831170	-	pyruvate dehydrogenase complex E1 component%2C beta subunit	identified by match to protein family HMM PF02779%3B match to protein family HMM PF02780	gene	gene4158	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4206
BAA_4207	BAA_4207	pdhA	pdhA	3831174	3832289	-	pyruvate dehydrogenase complex E1 component%2C alpha subunit	identified by match to protein family HMM PF00676%3B match to protein family HMM TIGR03181	gene	gene4159	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4207
BAA_4208	BAA_4208		BAA_4208	3832803	3832949	+	conserved hypothetical protein	identified by match to protein family HMM PF09680%3B match to protein family HMM TIGR01732	gene	gene4160	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4208
BAA_4209	BAA_4209	def2	def2	3833096	3833650	+	peptide deformylase	identified by match to protein family HMM PF01327%3B match to protein family HMM TIGR00079	gene	gene4161	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4209
BAA_4210	BAA_4210		BAA_4210	3833713	3834486	-	hydrolase%2C haloacid dehalogenase-like family	identified by match to protein family HMM PF00702%3B match to protein family HMM PF05116%3B match to protein family HMM PF08282%3B match to protein family HMM TIGR00099%3B match to protein family HMM TIGR01484	gene	gene4162	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4210
BAA_4211	BAA_4211		BAA_4211	3835034	3835246	+	conserved hypothetical protein	identified by match to protein family HMM PF07288	gene	gene4163	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4211
BAA_4212	BAA_4212		BAA_4212	3835251	3836918	+	RNA-metabolising metallo-beta-lactamase family protein	identified by match to protein family HMM PF00753%3B match to protein family HMM PF07521%3B match to protein family HMM TIGR00649	gene	gene4164	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4212
BAA_4213	BAA_4213		BAA_4213	3836958	3837623	-	potassium uptake protein%2C TrkA family	identified by match to protein family HMM PF02080%3B match to protein family HMM PF02254	gene	gene4165	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4213
BAA_4214	BAA_4214		BAA_4214	3837707	3838573	-	cytochrome d ubiquinol oxidase%2C subunit II-related protein		gene	gene4166	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4214
BAA_4215	BAA_4215		BAA_4215	3838828	3839958	-	peptidase%2C M20/M25/M40 family	identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01891	gene	gene4167	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4215
BAA_4216	BAA_4216		BAA_4216	3840020	3840742	-	putative 2%2C3%2C4%2C5-tetrahydropyridine-2-carboxylate N-succinyltransferase	identified by match to protein family HMM PF00132%3B match to protein family HMM PF08503%3B match to protein family HMM TIGR03532	gene	gene4168	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4216
BAA_4217	BAA_4217		BAA_4217	3840814	3841698	-	transcriptional regulator%2C LysR family	identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466	gene	gene4169	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4217
BAA_4218	BAA_4218		BAA_4218	3841840	3842283	-	CBS domain protein	identified by match to protein family HMM PF00571	gene	gene4170	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4218
BAA_4219	BAA_4219		BAA_4219	3842453	3842644	-	conserved hypothetical protein		gene	gene4171	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4219
BAA_4220	BAA_4220		BAA_4220	3842753	3843271	-	conserved hypothetical protein	identified by match to protein family HMM PF04308	gene	gene4172	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4220
BAA_4221	BAA_4221		BAA_4221	3843346	3843495	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4173	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4221
BAA_4222	BAA_4222		BAA_4222	3843707	3843943	-	conserved hypothetical protein	identified by match to protein family HMM PF08796	gene	gene4174	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4222
BAA_4223	BAA_4223		BAA_4223	3844177	3844413	+	glutaredoxin family protein	identified by match to protein family HMM PF00462%3B match to protein family HMM TIGR02196	gene	gene4175	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4223
BAA_4224	BAA_4224		BAA_4224	3844528	3845016	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4176	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4224
BAA_4225	BAA_4225		BAA_4225	3845032	3845199	-		conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene4177	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4225
BAA_4226	BAA_4226		BAA_4226	3845199	3846416	-	EAL-domain protein	identified by match to protein family HMM PF00563	gene	gene4178	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4226
BAA_4227	BAA_4227		BAA_4227	3846672	3847436	-	oxidoreductase%2C short chain dehydrogenase/reductase family	identified by match to protein family HMM PF00106	gene	gene4179	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4227
BAA_4228	BAA_4228		BAA_4228	3847680	3848537	+	Ser/Thr protein phosphatase family protein	identified by match to protein family HMM PF00149	gene	gene4180	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4228
BAA_4229	BAA_4229		BAA_4229	3848635	3848871	+	hypothetical protein	identified by glimmer%3B putative	gene	gene4181	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4229
BAA_4230	BAA_4230	ppk	ppk	3849045	3851153	-	polyphosphate kinase	identified by match to protein family HMM PF02503	gene	gene4182	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4230
BAA_4231	BAA_4231		BAA_4231	3851262	3852800	-	Ppx/GppA phosphatase family protein	identified by match to protein family HMM PF02541	gene	gene4183	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4231
BAA_4232	BAA_4232		BAA_4232	3852978	3853436	+	conserved hypothetical protein		gene	gene4184	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4232
BAA_4233	BAA_4233		BAA_4233	3853468	3854130	-	putative lipoprotein		gene	gene4185	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4233
BAA_4234	BAA_4234		BAA_4234	3854190	3854318	-		hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by glimmer%3B putative	pseudogene	gene4186	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4234
BAA_4235	BAA_4235		BAA_4235	3854785	3855405	-	conserved domain protein		gene	gene4187	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4235
BAA_4236	BAA_4236		BAA_4236	3855570	3855803	+	hypothetical protein	identified by glimmer%3B putative	gene	gene4188	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4236
BAA_4237	BAA_4237		BAA_4237	3855835	3856335	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4189	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4237
BAA_4238	BAA_4238		BAA_4238	3856759	3858300	+	drug resistance transporter%2C EmrB/QacA family	identified by match to protein family HMM PF07690%3B match to protein family HMM TIGR00711	gene	gene4190	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4238
BAA_4239	BAA_4239		BAA_4239	3858392	3858949	+	conserved hypothetical protein	identified by match to protein family HMM PF03551	gene	gene4191	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4239
BAA_4241	BAA_4241	metE	metE	3859567	3861855	+	5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase	identified by match to protein family HMM PF01717%3B match to protein family HMM PF08267%3B match to protein family HMM TIGR01371	gene	gene4192	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4241
BAA_4242	BAA_4242	comJ	comJ	3861892	3862281	-	competence protein j		gene	gene4193	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4242
BAA_4243	BAA_4243	comI	comI	3862318	3862752	-	competence-specific nuclease		gene	gene4194	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4243
BAA_4244	BAA_4244		BAA_4244	3862986	3863738	+	conserved hypothetical protein		gene	gene4195	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4244
BAA_4245	BAA_4245	kinB3	kinB3	3863792	3865066	-	sporulation kinase B	identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518	gene	gene4196	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4245
BAA_4246	BAA_4246		BAA_4246	3865377	3865577	+	hypothetical protein	identified by glimmer%3B putative	gene	gene4197	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4246
BAA_4247	BAA_4247		BAA_4247	3865700	3866863	+	aminotransferase%2C classes I and II	identified by match to protein family HMM PF00155	gene	gene4198	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4247
BAA_4248	BAA_4248	malR	malR	3866868	3867899	-	maltose operon transcriptional repressor	identified by match to protein family HMM PF00356%3B match to protein family HMM PF00532	gene	gene4199	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4248
BAA_4249	BAA_4249		BAA_4249	3868063	3868176	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4200	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4249
BAA_4250	BAA_4250	malD	malD	3868180	3869022	-	maltosaccharide ABC transporter%2C permease protein	identified by match to protein family HMM PF00528	gene	gene4201	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4250
BAA_4251	BAA_4251	malC	malC	3869023	3870324	-	maltosaccharide ABC transporter%2C permease protein	identified by match to protein family HMM PF00528	gene	gene4202	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4251
BAA_4252	BAA_4252		BAA_4252	3870389	3871648	-	putative maltosaccharide ABC transporter%2C maltosaccharide-binding protein	identified by match to protein family HMM PF01547	gene	gene4203	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4252
BAA_4253	BAA_4253		BAA_4253	3871974	3873734	+	alpha-amylase	identified by match to protein family HMM PF00128%3B match to protein family HMM PF02903	gene	gene4204	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4253
BAA_4254	BAA_4254	malL	malL	3873775	3875451	-	oligo-1%2C6-glucosidase	identified by match to protein family HMM PF00128	gene	gene4205	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4254
BAA_4255	BAA_4255		BAA_4255	3875713	3876813	+	sugar ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005%3B match to protein family HMM PF03459%3B match to protein family HMM PF08402	gene	gene4206	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4255
BAA_4256	BAA_4256		BAA_4256	3876880	3877389	-	conserved domain protein	identified by match to protein family HMM PF00106	gene	gene4207	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4256
BAA_4257	BAA_4257		BAA_4257	3877730	3878185	-	conserved hypothetical protein	identified by match to protein family HMM PF06271	gene	gene4208	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4257
BAA_4258	BAA_4258		BAA_4258	3878317	3878757	+	putative lipoprotein		gene	gene4209	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4258
BAA_4259	BAA_4259		BAA_4259	3878797	3879561	-	putative lipoprotein		gene	gene4210	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4259
BAA_4260	BAA_4260		BAA_4260	3879597	3880325	-	conserved hypothetical protein		gene	gene4211	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4260
BAA_4261	BAA_4261		BAA_4261	3880538	3881263	+	conserved hypothetical protein	identified by match to protein family HMM PF02463	gene	gene4212	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4261
BAA_4262	BAA_4262		BAA_4262	3881294	3882469	-	acetyl-CoA acetyltransferase	identified by match to protein family HMM PF00108%3B match to protein family HMM PF02803%3B match to protein family HMM TIGR01930	gene	gene4213	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4262
BAA_4263	BAA_4263		BAA_4263	3882609	3883058	-	MutT/NUDIX family protein	identified by match to protein family HMM PF00293	gene	gene4214	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4263
BAA_4264	BAA_4264		BAA_4264	3883167	3883460	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4215	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4264
BAA_4265	BAA_4265		BAA_4265	3883621	3884238	+	hypothetical protein	identified by glimmer%3B putative	gene	gene4216	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4265
BAA_4266	BAA_4266		BAA_4266	3884499	3885164	-	putative membrane protein		gene	gene4217	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4266
BAA_4267	BAA_4267		BAA_4267	3885187	3885948	-	putative membrane protein		gene	gene4218	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4267
BAA_4268	BAA_4268		BAA_4268	3885965	3886729	-	conserved domain protein		gene	gene4219	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4268
BAA_4269	BAA_4269		BAA_4269	3886729	3887061	-	transcriptional regulator%2C PadR family	identified by match to protein family HMM PF03551	gene	gene4220	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4269
BAA_4270	BAA_4270		BAA_4270	3887257	3888033	+	oxidoreductase%2C short-chain dehydrogenase/reductase family	identified by match to protein family HMM PF00106%3B match to protein family HMM TIGR01963	gene	gene4221	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4270
BAA_4271	BAA_4271		BAA_4271	3888064	3888225	-	conserved hypothetical protein		gene	gene4222	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4271
BAA_4272	BAA_4272	mtnA_2	mtnA_2	3888300	3889355	-	S-methyl-5-thioribose-1-phosphate isomerase	identified by match to protein family HMM PF01008%3B match to protein family HMM TIGR00512%3B match to protein family HMM TIGR00524	gene	gene4223	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4272
BAA_4273	BAA_4273		BAA_4273	3889352	3890533	-	putative 5-methylthioribose kinase	identified by match to protein family HMM TIGR01767	gene	gene4224	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4273
BAA_4275	BAA_4275		BAA_4275	3890838	3891617	-	hydrolase%2C carbon-nitrogen family	identified by match to protein family HMM PF00795	gene	gene4225	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4275
BAA_4276	BAA_4276		BAA_4276	3891715	3892893	+	aminotransferase%2C classes I and II	identified by match to protein family HMM PF00155%3B match to protein family HMM PF00202	gene	gene4226	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4276
BAA_4278	BAA_4278	mtnW	mtnW	3893130	3894374	+	2%2C3-diketo-5-methylthiopentyl-1-phosphate enolase	identified by match to protein family HMM PF00016%3B match to protein family HMM TIGR03332	gene	gene4227	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4278
BAA_4279	BAA_4279	mtnX	mtnX	3894371	3895030	+	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase	identified by match to protein family HMM TIGR01488%3B match to protein family HMM TIGR01489%3B match to protein family HMM TIGR03333	gene	gene4228	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4279
BAA_4280	BAA_4280		BAA_4280	3895027	3895665	+	class II aldolase/adducin domain protein	identified by match to protein family HMM PF00596%3B match to protein family HMM TIGR03328	gene	gene4229	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4280
BAA_4281	BAA_4281		BAA_4281	3895643	3896155	+	putative 5-methylthio-3-oxo-1-penten-1%2C2-diol dioxygenase	identified by match to protein family HMM PF03079%3B match to protein family HMM PF07883	gene	gene4230	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4281
BAA_4282	BAA_4282		BAA_4282	3896462	3896737	+	hypothetical protein	identified by glimmer%3B putative	gene	gene4231	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4282
BAA_4283	BAA_4283		BAA_4283	3896788	3897120	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4232	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4283
BAA_4284	BAA_4284		BAA_4284	3897122	3897586	-		2-hydroxy-3-oxopropionate reductase%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene4233	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4284
BAA_4285	BAA_4285		BAA_4285	3897640	3898002	-		3-hydroxyisobutyrate dehydrogenase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF03446	pseudogene	gene4234	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4285
BAA_4286	BAA_4286		BAA_4286	3898428	3899720	-	putative sensory box/GGDEF family protein	identified by match to protein family HMM PF00990%3B match to protein family HMM TIGR00254	gene	gene4235	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4286
BAA_4287	BAA_4287		BAA_4287	3900053	3900670	+	nitroreductase family protein	identified by match to protein family HMM PF00881	gene	gene4236	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4287
BAA_4288	BAA_4288		BAA_4288	3900956	3901174	+	hypothetical protein	identified by glimmer%3B putative	gene	gene4237	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4288
BAA_4289	BAA_4289		BAA_4289	3901371	3901733	+	hypothetical protein	identified by glimmer%3B putative	gene	gene4238	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4289
BAA_4290	BAA_4290	ptsI	ptsI	3901831	3903543	-	phosphoenolpyruvate-protein phosphotransferase	identified by match to protein family HMM PF00391%3B match to protein family HMM PF02896%3B match to protein family HMM PF05524%3B match to protein family HMM TIGR01417	gene	gene4239	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4290
BAA_4291	BAA_4291	ptsH1	ptsH1	3903543	3903806	-	phosphocarrier protein HPr	identified by match to protein family HMM PF00381%3B match to protein family HMM TIGR01003	gene	gene4240	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4291
BAA_4292	BAA_4292	ptsG	ptsG	3903941	3906004	-	PTS system%2C glucose-specific IIABC component	identified by match to protein family HMM PF00358%3B match to protein family HMM PF00367%3B match to protein family HMM PF02378%3B match to protein family HMM TIGR00826%3B match to protein family HMM TIGR00830%3B match to protein family HMM TIGR02002	gene	gene4241	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4292
BAA_4293	BAA_4293	glcT	glcT	3906343	3907191	-	transcription antiterminator GlcT	identified by match to protein family HMM PF00874%3B match to protein family HMM PF03123	gene	gene4242	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4293
BAA_4294	BAA_4294		BAA_4294	3907357	3908163	+	hydrolase%2C haloacid dehalogenase-like family	identified by match to protein family HMM PF05116%3B match to protein family HMM PF08282%3B match to protein family HMM TIGR00099%3B match to protein family HMM TIGR01484	gene	gene4243	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4294
BAA_4295	BAA_4295		BAA_4295	3908234	3908791	-	transcriptional regulator%2C GntR family	identified by match to protein family HMM PF07702	gene	gene4244	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4295
BAA_4296	BAA_4296	nagB	nagB	3908895	3909683	-	glucosamine-6-phosphate deaminase	identified by match to protein family HMM PF01182%3B match to protein family HMM TIGR00502	gene	gene4245	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4296
BAA_4297	BAA_4297	nagA	nagA	3909688	3910830	-	N-acetylglucosamine-6-phosphate deacetylase	identified by match to protein family HMM PF01979%3B match to protein family HMM PF07969%3B match to protein family HMM TIGR00221	gene	gene4246	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4297
BAA_4298	BAA_4298		BAA_4298	3911039	3911941	-	metallo-beta-lactamase family protein	identified by match to protein family HMM PF00753	gene	gene4247	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4298
BAA_4299	BAA_4299	scpB	scpB	3912020	3912592	-	segregation and condensation protein B	identified by match to protein family HMM PF04079%3B match to protein family HMM TIGR00281	gene	gene4248	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4299
BAA_4300	BAA_4300	scpA	scpA	3912750	3913493	-	segregation and condensation protein A	identified by match to protein family HMM PF02616	gene	gene4249	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4300
BAA_4301	BAA_4301		BAA_4301	3913857	3914375	+	conserved hypothetical protein	identified by match to protein family HMM PF03745	gene	gene4250	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4301
BAA_4302	BAA_4302	ribT	ribT	3914396	3914764	-	ribT protein	identified by match to protein family HMM PF00583	gene	gene4251	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4302
BAA_4303	BAA_4303		BAA_4303	3914833	3914997	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4252	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4303
BAA_4304	BAA_4304		BAA_4304	3915233	3915670	-	peptidyl-prolyl cis-trans isomerase%2C cyclophilin-type	identified by match to protein family HMM PF00160	gene	gene4253	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4304
BAA_4305	BAA_4305		BAA_4305	3915858	3916724	+	conserved hypothetical protein	identified by match to protein family HMM PF06207	gene	gene4254	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4305
BAA_4306	BAA_4306		BAA_4306	3916755	3917558	-	HAD-superfamily hydrolase%2C subfamily IIB	identified by match to protein family HMM PF05116%3B match to protein family HMM PF08282%3B match to protein family HMM TIGR00099%3B match to protein family HMM TIGR01484	gene	gene4255	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4306
BAA_4307	BAA_4307	spoVAF	spoVAF	3917655	3919127	-	stage V sporulation protein AF	identified by match to protein family HMM PF03323	gene	gene4256	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4307
BAA_4308	BAA_4308		BAA_4308	3919114	3919665	-	stage V sporulation protein AE		gene	gene4257	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4308
BAA_4309	BAA_4309	spoVAE_1	spoVAE_1	3919689	3920039	-	stage V sporulation protein AE	identified by match to protein family HMM PF03862%3B match to protein family HMM TIGR02839	gene	gene4258	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4309
BAA_4310	BAA_4310	spoVAD_1	spoVAD_1	3920043	3921059	-	stage V sporulation protein AD	identified by match to protein family HMM PF07451%3B match to protein family HMM TIGR02845	gene	gene4259	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4310
BAA_4311	BAA_4311	spoVAC_1	spoVAC_1	3921073	3921531	-	stage V sporulation protein AC	identified by match to protein family HMM PF03862%3B match to protein family HMM TIGR02838	gene	gene4260	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4311
BAA_4312	BAA_4312	spoVAB	spoVAB	3921546	3921962	-	stage V sporulation protein AB		gene	gene4261	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4312
BAA_4313	BAA_4313	spoVAA	spoVAA	3921955	3922575	-	stage V sporulation protein AA		gene	gene4262	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4313
BAA_4314	BAA_4314		BAA_4314	3922690	3922812	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4263	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4314
BAA_4315	BAA_4315		BAA_4315	3922788	3924314	-	sodium-dependent symporter family protein	identified by match to protein family HMM PF00209	gene	gene4264	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4315
BAA_4316	BAA_4316	sigF	sigF	3924452	3925210	-	RNA polymerase sigma-F factor	identified by match to protein family HMM PF04539%3B match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02885%3B match to protein family HMM TIGR02937%3B match to protein family HMM TIGR02980	gene	gene4265	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4316
BAA_4317	BAA_4317	spoIIAB	spoIIAB	3925223	3925663	-	anti-sigma F factor antagonist	identified by match to protein family HMM PF02518%3B match to protein family HMM TIGR01925	gene	gene4266	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4317
BAA_4318	BAA_4318	spoIIAA	spoIIAA	3925664	3926014	-	anti-sigma F factor antagonist	identified by match to protein family HMM PF01740%3B match to protein family HMM TIGR00377%3B match to protein family HMM TIGR02886	gene	gene4267	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4318
BAA_4319	BAA_4319	dacF	dacF	3926185	3927375	-	serine-type D-Ala-D-Ala carboxypeptidase DacF	identified by match to protein family HMM PF00768%3B match to protein family HMM PF07943	gene	gene4268	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4319
BAA_4320	BAA_4320		BAA_4320	3927542	3927961	+	transcriptional regulator%2C GntR family	identified by match to protein family HMM PF00392%3B match to protein family HMM PF02082	gene	gene4269	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4320
BAA_4321	BAA_4321		BAA_4321	3927927	3928808	+	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene4270	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4321
BAA_4322	BAA_4322		BAA_4322	3928798	3929886	+	putative membrane protein		gene	gene4271	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4322
BAA_4323	BAA_4323		BAA_4323	3929984	3930529	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4272	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4323
BAA_4324	BAA_4324		BAA_4324	3930632	3931051	-	transcriptional regulator%2C MarR family	identified by match to protein family HMM PF01047	gene	gene4273	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4324
BAA_4325	BAA_4325		BAA_4325	3931211	3931882	+	conserved hypothetical protein	identified by match to protein family HMM PF04402	gene	gene4274	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4325
BAA_4326	BAA_4326		BAA_4326	3932017	3933306	+	xanthine/uracil permease family protein	identified by match to protein family HMM PF00860%3B match to protein family HMM PF00916	gene	gene4275	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4326
BAA_4327	BAA_4327	corA	corA	3933341	3934291	-	magnesium and cobalt transport protein CorA	identified by match to protein family HMM PF01544%3B match to protein family HMM TIGR00383	gene	gene4276	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4327
BAA_4328	BAA_4328	pyn2	pyn2	3934366	3935670	-	pyrimidine-nucleoside phosphorylase	identified by match to protein family HMM PF00591%3B match to protein family HMM PF02885%3B match to protein family HMM PF07831%3B match to protein family HMM TIGR02644	gene	gene4277	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4328
BAA_4329	BAA_4329		BAA_4329	3935678	3936499	-	purine nucleoside phosphorylase	identified by match to protein family HMM PF00896%3B match to protein family HMM TIGR01697%3B match to protein family HMM TIGR01700	gene	gene4278	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4329
BAA_4330	BAA_4330	deoB	deoB	3936512	3937696	-	phosphopentomutase	identified by match to protein family HMM PF01676%3B match to protein family HMM PF08342%3B match to protein family HMM TIGR01696	gene	gene4279	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4330
BAA_4331	BAA_4331		BAA_4331	3938102	3938845	-	putative lipoprotein		gene	gene4280	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4331
BAA_4332	BAA_4332		BAA_4332	3938989	3939879	-	integrase/recombinase XerD	identified by match to protein family HMM PF00589%3B match to protein family HMM PF02899%3B match to protein family HMM TIGR02225	gene	gene4281	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4332
BAA_4333	BAA_4333		BAA_4333	3939886	3940116	-	conserved hypothetical protein		gene	gene4282	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4333
BAA_4334	BAA_4334		BAA_4334	3940220	3940675	-	transcriptional regulator%2C Fur family	identified by match to protein family HMM PF01475	gene	gene4283	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4334
BAA_4335	BAA_4335	spoIIM	spoIIM	3940782	3941429	-	stage II sporulation protein M	identified by match to protein family HMM PF01944%3B match to protein family HMM TIGR02831	gene	gene4284	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4335
BAA_4336	BAA_4336		BAA_4336	3941556	3942107	+	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene4285	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4336
BAA_4337	BAA_4337		BAA_4337	3942132	3942671	-	MutT/NUDIX family protein	identified by match to protein family HMM PF00293	gene	gene4286	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4337
BAA_4338	BAA_4338		BAA_4338	3942746	3942874	+	hypothetical protein	identified by glimmer%3B putative	gene	gene4287	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4338
BAA_4339	BAA_4339	lolS	lolS	3942928	3943842	+	lolS protein	identified by match to protein family HMM PF00248	gene	gene4288	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4339
BAA_4340	BAA_4340		BAA_4340	3943872	3944699	-	oxidoreductase%2C aldo/keto reductase family	identified by match to protein family HMM PF00248	gene	gene4289	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4340
BAA_4341	BAA_4341		BAA_4341	3944828	3945352	-	conserved hypothetical protein	identified by match to protein family HMM PF04229	gene	gene4290	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4341
BAA_4342	BAA_4342		BAA_4342	3945422	3945685	-	conserved hypothetical protein		gene	gene4291	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4342
BAA_4343	BAA_4343		BAA_4343	3945887	3947476	+	5'-nucleotidase family protein	identified by match to protein family HMM PF00149%3B match to protein family HMM PF02872	gene	gene4292	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4343
BAA_4344	BAA_4344		BAA_4344	3947599	3948075	-	DNA-binding protein%2C CopG family		gene	gene4293	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4344
BAA_4345	BAA_4345		BAA_4345	3948197	3949195	+	putative hydrolase%2C alpha/beta fold family	identified by match to protein family HMM PF00561	gene	gene4294	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4345
BAA_4346	BAA_4346		BAA_4346	3949327	3950646	+	putative membrane protein	identified by match to protein family HMM PF03553%3B match to protein family HMM PF03600%3B match to protein family HMM PF06808	gene	gene4295	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4346
BAA_4347	BAA_4347		BAA_4347	3950670	3951533	-	putative sugar-binding transcriptional regulator%2C LacI family	identified by match to protein family HMM PF00356	gene	gene4296	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4347
BAA_4348	BAA_4348		BAA_4348	3951633	3952115	-	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene4297	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4348
BAA_4349	BAA_4349		BAA_4349	3952197	3953120	+	conserved hypothetical protein		gene	gene4298	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4349
BAA_4350	BAA_4350		BAA_4350	3953131	3953376	-	conserved hypothetical protein		gene	gene4299	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4350
BAA_4351	BAA_4351		BAA_4351	3953516	3953722	+	conserved hypothetical protein	identified by match to protein family HMM PF09360	gene	gene4300	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4351
BAA_4353	BAA_4353	ribD	ribD	3954368	3955480	+	riboflavin biosynthesis protein RibD	identified by match to protein family HMM PF00383%3B match to protein family HMM PF01872%3B match to protein family HMM TIGR00227%3B match to protein family HMM TIGR00326	gene	gene4301	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4353
BAA_4354	BAA_4354	ribE	ribE	3955462	3956106	+	riboflavin synthase%2C alpha subunit	identified by match to protein family HMM PF00677%3B match to protein family HMM TIGR00187	gene	gene4302	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4354
BAA_4355	BAA_4355	ribBA	ribBA	3956119	3957312	+	3%2C4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II	identified by match to protein family HMM PF00925%3B match to protein family HMM PF00926%3B match to protein family HMM TIGR00505%3B match to protein family HMM TIGR00506	gene	gene4303	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4355
BAA_4356	BAA_4356		BAA_4356	3957768	3958139	-	conserved domain protein		gene	gene4305	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4356
BAA_4357	BAA_4357	ribH	ribH	3957331	3957792	+	6%2C7-dimethyl-8-ribityllumazine synthase	identified by match to protein family HMM PF00885%3B match to protein family HMM TIGR00114	gene	gene4304	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4357
BAA_4358	BAA_4358	bioB	bioB	3958322	3959320	-	biotin synthase	identified by match to protein family HMM PF04055%3B match to protein family HMM PF06968%3B match to protein family HMM TIGR00433	gene	gene4306	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4358
BAA_4359	BAA_4359		BAA_4359	3959322	3960131	-	putative biotin synthesis protein BioC	identified by match to protein family HMM PF05401%3B match to protein family HMM PF08241%3B match to protein family HMM PF08242%3B match to protein family HMM TIGR02072	gene	gene4307	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4359
BAA_4360	BAA_4360		BAA_4360	3960097	3960837	-	putative bioH protein	identified by match to protein family HMM PF00561	gene	gene4308	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4360
BAA_4361	BAA_4361	bioF	bioF	3960834	3962021	-	8-amino-7-oxononanoate synthase	identified by match to protein family HMM PF00155%3B match to protein family HMM PF00464%3B match to protein family HMM TIGR00858	gene	gene4309	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4361
BAA_4362	BAA_4362	bioD	bioD	3961987	3962715	-	dethiobiotin synthase	identified by match to protein family HMM TIGR00347	gene	gene4310	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4362
BAA_4363	BAA_4363	bioA	bioA	3962715	3964103	-	adenosylmethionine-8-amino-7-oxononanoate transaminase	identified by match to protein family HMM PF00202%3B match to protein family HMM TIGR00508	gene	gene4311	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4363
BAA_4364	BAA_4364		BAA_4364	3964226	3964582	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4312	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4364
BAA_4365	BAA_4365		BAA_4365	3964851	3964973	+	hypothetical protein	identified by glimmer%3B putative	gene	gene4313	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4365
BAA_4366	BAA_4366	nhaC3	nhaC3	3965221	3966594	+	Na+/H+ antiporter NhaC	identified by match to protein family HMM PF03553%3B match to protein family HMM PF03600%3B match to protein family HMM TIGR00931	gene	gene4314	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4366
BAA_4367	BAA_4367	cpdB	cpdB	3966644	3968986	-	2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase	identified by match to protein family HMM PF00149%3B match to protein family HMM PF00746%3B match to protein family HMM PF02872%3B match to protein family HMM TIGR01167	gene	gene4315	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4367
BAA_4368	BAA_4368		BAA_4368	3969353	3970132	+	putative lipase/acylhydrolase	identified by match to protein family HMM PF00657	gene	gene4316	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4368
BAA_4369	BAA_4369		BAA_4369	3970205	3970651	+	transcriptional regulator%2C MarR family	identified by match to protein family HMM PF01047	gene	gene4317	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4369
BAA_4370	BAA_4370		BAA_4370	3970676	3970864	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4318	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4370
BAA_4371	BAA_4371		BAA_4371	3970923	3971480	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4319	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4371
BAA_4372	BAA_4372	argF	argF	3971660	3972610	-	ornithine carbamoyltransferase	identified by match to protein family HMM PF00185%3B match to protein family HMM PF02729%3B match to protein family HMM TIGR00658	gene	gene4320	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4372
BAA_4373	BAA_4373	argD	argD	3972623	3973783	-	acetylornithine transaminase	identified by match to protein family HMM PF00202%3B match to protein family HMM TIGR00707	gene	gene4321	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4373
BAA_4374	BAA_4374	argB	argB	3973780	3974547	-	acetylglutamate kinase	identified by match to protein family HMM PF00696%3B match to protein family HMM TIGR00761	gene	gene4322	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4374
BAA_4375	BAA_4375	argJ	argJ	3974559	3975782	-	glutamate N-acetyltransferase/amino-acid acetyltransferase	identified by match to protein family HMM PF01960%3B match to protein family HMM TIGR00120	gene	gene4323	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4375
BAA_4376	BAA_4376	argC	argC	3975794	3976831	-	N-acetyl-gamma-glutamyl-phosphate reductase	identified by match to protein family HMM PF01118%3B match to protein family HMM PF02774%3B match to protein family HMM TIGR01850	gene	gene4324	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4376
BAA_4377	BAA_4377		BAA_4377	3977055	3977240	+	hypothetical protein	identified by glimmer%3B putative	gene	gene4325	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4377
BAA_4378	BAA_4378		BAA_4378	3977271	3978065	-	oxidoreductase%2C short-chain dehydrogenase/reductase family	identified by match to protein family HMM PF00106%3B match to protein family HMM PF08659	gene	gene4326	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4378
BAA_4379	BAA_4379		BAA_4379	3978075	3978818	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene4327	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4379
BAA_4380	BAA_4380		BAA_4380	3978806	3979027	-		lactamase B%2C metallo-beta-lactamase superfamily%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene4328	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4380
BAA_4381	BAA_4381	proC3	proC3	3979192	3980031	+	pyrroline-5-carboxylate reductase	identified by match to protein family HMM PF01210%3B match to protein family HMM PF03807%3B match to protein family HMM TIGR00112	gene	gene4329	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4381
BAA_4382	BAA_4382	sdaAA2	sdaAA2	3980082	3980960	-	L-serine dehydratase%2C iron-sulfur-dependent%2C alpha subunit	identified by match to protein family HMM PF03313%3B match to protein family HMM TIGR00718	gene	gene4330	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4382
BAA_4383	BAA_4383	sdaAB2	sdaAB2	3980979	3981638	-	L-serine dehydratase%2C iron-sulfur-dependent%2C beta subunit	identified by match to protein family HMM PF01842%3B match to protein family HMM PF03315%3B match to protein family HMM TIGR00719	gene	gene4331	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4383
BAA_4384	BAA_4384		BAA_4384	3981676	3981831	-		hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by glimmer%3B putative	pseudogene	gene4332	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4384
BAA_4385	BAA_4385	rnz	rnz	3982382	3983305	-	ribonuclease Z	identified by match to protein family HMM PF00753%3B match to protein family HMM TIGR02651	gene	gene4333	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4385
BAA_4386	BAA_4386		BAA_4386	3983495	3983746	+	hypothetical protein	identified by glimmer%3B putative	gene	gene4334	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4386
BAA_4387	BAA_4387		BAA_4387	3983968	3985206	-	putative DNA-damage-inducible protein P	identified by match to protein family HMM PF00817	gene	gene4335	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4387
BAA_4388	BAA_4388		BAA_4388	3985595	3986713	-	peptidase%2C M20/M25/M40 family	identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01883	gene	gene4336	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4388
BAA_4389	BAA_4389		BAA_4389	3986841	3987386	-	putative ribosomal-protein-alanine acetyltransferase	identified by match to protein family HMM PF00583	gene	gene4337	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4389
BAA_4390	BAA_4390		BAA_4390	3987740	3987979	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4338	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4390
BAA_4391	BAA_4391		BAA_4391	3988046	3988606	-	conserved hypothetical protein	identified by match to protein family HMM PF03734	gene	gene4339	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4391
BAA_4392	BAA_4392		BAA_4392	3988623	3989591	-	conserved hypothetical protein	identified by match to protein family HMM PF06081	gene	gene4340	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4392
BAA_4393	BAA_4393		BAA_4393	3989688	3990410	-	amino acid ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene4341	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4393
BAA_4394	BAA_4394		BAA_4394	3990403	3991062	-	amino acid ABC transporter%2C permease protein	identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01726	gene	gene4342	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4394
BAA_4395	BAA_4395		BAA_4395	3991099	3991878	-	amino acid ABC transporter%2C amino acid-binding protein	identified by match to protein family HMM PF00497%3B match to protein family HMM PF04069	gene	gene4343	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4395
BAA_4396	BAA_4396		BAA_4396	3991890	3992039	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4344	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4396
BAA_4397	BAA_4397		BAA_4397	3992128	3992562	-	conserved hypothetical protein	identified by match to protein family HMM PF06491	gene	gene4345	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4397
BAA_4398	BAA_4398		BAA_4398	3992684	3993091	-	conserved hypothetical protein		gene	gene4346	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4398
BAA_4399	BAA_4399		BAA_4399	3993250	3993675	-		hydrolase%2C NUDIX family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00293	pseudogene	gene4347	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4399
BAA_4400	BAA_4400		BAA_4400	3993842	3995020	-	cell division protein%2C FtsW/RodA/SpoVE family	identified by match to protein family HMM PF01098	gene	gene4348	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4400
BAA_4401	BAA_4401	bfmbB	bfmbB	3995362	3996681	-	dihydrolipoamide acetyltransferase	identified by match to protein family HMM PF00198%3B match to protein family HMM PF00364%3B match to protein family HMM PF02817	gene	gene4349	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4401
BAA_4402	BAA_4402	bfmbAb	bfmbAb	3996697	3997680	-	3-methyl-2-oxobutanoate dehydrogenase%2C beta subunit	identified by match to protein family HMM PF02779%3B match to protein family HMM PF02780	gene	gene4350	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4402
BAA_4403	BAA_4403	bfmbAa	bfmbAa	3997694	3998695	-	3-methyl-2-oxobutanoate dehydrogenase%2C alpha subunit	identified by match to protein family HMM PF00676	gene	gene4351	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4403
BAA_4404	BAA_4404	bfmbC	bfmbC	3998723	4000144	-	3-methyl-2-oxobutanoate dehydrogenase complex%2C dihydrolipoamide dehydrogenase component	identified by match to protein family HMM PF00070%3B match to protein family HMM PF01134%3B match to protein family HMM PF02852%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR01350	gene	gene4352	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4404
BAA_4405	BAA_4405	buk	buk	4000149	4001252	-	butyrate kinase	identified by match to protein family HMM PF00871%3B match to protein family HMM TIGR02707	gene	gene4353	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4405
BAA_4406	BAA_4406		BAA_4406	4001340	4002440	-	leucine dehydrogenase	identified by match to protein family HMM PF00208%3B match to protein family HMM PF02812	gene	gene4354	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4406
BAA_4407	BAA_4407	yqiS	yqiS	4002475	4003374	-	phosphate butyryltransferase	identified by match to protein family HMM PF01515%3B match to protein family HMM TIGR02706	gene	gene4355	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4407
BAA_4408	BAA_4408		BAA_4408	4003570	4005642	-	sensory box sigma-54 dependent DNA-binding response regulator	identified by match to protein family HMM PF00158%3B match to protein family HMM PF00989%3B match to protein family HMM PF02954%3B match to protein family HMM PF08448%3B match to protein family HMM TIGR00229	gene	gene4356	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4408
BAA_4409	BAA_4409		BAA_4409	4005779	4006012	+	conserved hypothetical protein		gene	gene4357	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4409
BAA_4410	BAA_4410		BAA_4410	4006061	4006789	-	glycerophosphoryl diester phosphodiesterase family protein	identified by match to protein family HMM PF03009	gene	gene4358	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4410
BAA_4411	BAA_4411		BAA_4411	4006840	4006986	+	conserved hypothetical protein		gene	gene4359	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4411
BAA_4412	BAA_4412		BAA_4412	4007154	4008680	-	conserved hypothetical protein		gene	gene4360	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4412
BAA_4413	BAA_4413	spo0A	spo0A	4008978	4009808	-	stage 0 sporulation protein A	identified by match to protein family HMM PF00072%3B match to protein family HMM PF08769%3B match to protein family HMM TIGR02875	gene	gene4361	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4413
BAA_4414	BAA_4414	spoIVB	spoIVB	4010060	4011349	-	SpoIVB peptidase	identified by match to protein family HMM PF00595%3B match to protein family HMM PF05580%3B match to protein family HMM TIGR02860	gene	gene4362	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4414
BAA_4415	BAA_4415	recN	recN	4011477	4013216	-	DNA repair protein RecN	identified by match to protein family HMM PF02463%3B match to protein family HMM TIGR00634	gene	gene4363	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4415
BAA_4416	BAA_4416	argR	argR	4013484	4013933	-	arginine repressor	identified by match to protein family HMM PF01316%3B match to protein family HMM PF02863%3B match to protein family HMM TIGR01529	gene	gene4364	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4416
BAA_4417	BAA_4417		BAA_4417	4014076	4014915	-	hemolysin A	identified by match to protein family HMM PF01479%3B match to protein family HMM PF01728%3B match to protein family HMM TIGR00478	gene	gene4365	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4417
BAA_4418	BAA_4418	dxs	dxs	4014919	4016811	-	1-deoxy-D-xylulose-5-phosphate synthase	identified by match to protein family HMM PF02779%3B match to protein family HMM PF02780%3B match to protein family HMM TIGR00204	gene	gene4366	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4418
BAA_4419	BAA_4419	ispA	ispA	4017113	4018003	-	geranyltranstransferase	identified by match to protein family HMM PF00348	gene	gene4367	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4419
BAA_4420	BAA_4420	xseB	xseB	4018003	4018233	-	exodeoxyribonuclease VII%2C small subunit	identified by match to protein family HMM PF02609%3B match to protein family HMM TIGR01280	gene	gene4368	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4420
BAA_4421	BAA_4421	xseA	xseA	4018223	4019581	-	exodeoxyribonuclease VII%2C large subunit	identified by match to protein family HMM PF01336%3B match to protein family HMM PF02601%3B match to protein family HMM TIGR00237	gene	gene4369	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4421
BAA_4422	BAA_4422	folD	folD	4019608	4020468	-	methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	identified by match to protein family HMM PF00763%3B match to protein family HMM PF02882	gene	gene4370	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4422
BAA_4423	BAA_4423	nusB	nusB	4020492	4020884	-	N utilization substance protein B	identified by match to protein family HMM PF01029%3B match to protein family HMM TIGR01951	gene	gene4371	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4423
BAA_4424	BAA_4424		BAA_4424	4021231	4021623	-	conserved hypothetical protein	identified by match to protein family HMM PF03780	gene	gene4372	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4424
BAA_4425	BAA_4425	accC	accC	4021646	4022998	-	acetyl-CoA carboxylase%2C biotin carboxylase	identified by match to protein family HMM PF00289%3B match to protein family HMM PF02222%3B match to protein family HMM PF02785%3B match to protein family HMM PF02786%3B match to protein family HMM PF08443%3B match to protein family HMM TIGR00514	gene	gene4373	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4425
BAA_4426	BAA_4426	accB	accB	4023015	4023509	-	acetyl-CoA carboxylase%2C biotin carboxyl carrier protein	identified by match to protein family HMM PF00364%3B match to protein family HMM TIGR00531	gene	gene4374	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4426
BAA_4427	BAA_4427		BAA_4427	4024267	4024938	-	stage III sporulation protein AH		gene	gene4375	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4427
BAA_4428	BAA_4428	spoIIIAG	spoIIIAG	4024954	4025616	-	stage III sporulation protein AG	identified by match to protein family HMM TIGR02830	gene	gene4376	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4428
BAA_4429	BAA_4429	spoIIIAF	spoIIIAF	4025606	4026238	-	stage III sporulation protein AF	identified by match to protein family HMM PF09581%3B match to protein family HMM TIGR02896	gene	gene4377	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4429
BAA_4430	BAA_4430	spoIIIAE	spoIIIAE	4026251	4027423	-	stage III sporulation protein AE	identified by match to protein family HMM PF09546%3B match to protein family HMM TIGR02829	gene	gene4378	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4430
BAA_4431	BAA_4431	spoIIIAD	spoIIIAD	4027434	4027730	-	stage III sporulation protein AD	identified by match to protein family HMM PF09555%3B match to protein family HMM TIGR02849	gene	gene4379	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4431
BAA_4432	BAA_4432	spoIIIAC	spoIIIAC	4027841	4028044	-	stage III sporulation protein AC	identified by match to protein family HMM PF06686%3B match to protein family HMM TIGR02848	gene	gene4380	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4432
BAA_4433	BAA_4433	spoIIIAB	spoIIIAB	4028059	4028574	-	stage III sporulation protein AB	identified by match to protein family HMM PF09548%3B match to protein family HMM TIGR02833	gene	gene4381	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4433
BAA_4434	BAA_4434	spoIIIAA	spoIIIAA	4028568	4029494	-	stage III sporulation protein AA	identified by match to protein family HMM TIGR02858	gene	gene4382	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4434
BAA_4435	BAA_4435		BAA_4435	4029523	4029804	-	conserved hypothetical protein		gene	gene4383	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4435
BAA_4436	BAA_4436		BAA_4436	4029993	4030571	+	acetyltransferase%2C GNAT family		gene	gene4384	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4436
BAA_4437	BAA_4437	efp	efp	4030890	4031447	-	translation elongation factor P	identified by match to protein family HMM PF01132%3B match to protein family HMM PF08207%3B match to protein family HMM PF09285%3B match to protein family HMM TIGR00038	gene	gene4385	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4437
BAA_4438	BAA_4438	pepQ1	pepQ1	4031469	4032530	-	Xaa-Pro dipeptidase	identified by match to protein family HMM PF00557%3B match to protein family HMM PF01321	gene	gene4386	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4438
BAA_4439	BAA_4439	aroQ	aroQ	4032535	4032975	-	3-dehydroquinate dehydratase%2C type II	identified by match to protein family HMM PF01220%3B match to protein family HMM TIGR01088	gene	gene4387	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4439
BAA_4440	BAA_4440		BAA_4440	4033028	4033516	-	conserved hypothetical protein		gene	gene4388	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4440
BAA_4441	BAA_4441		BAA_4441	4033761	4034681	+	conserved hypothetical protein	identified by match to protein family HMM PF07136	gene	gene4389	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4441
BAA_4442	BAA_4442		BAA_4442	4035159	4035821	-	hydrolase%2C haloacid dehalogenase-like family	identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01509	gene	gene4391	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4442
BAA_4443	BAA_4443		BAA_4443	4034761	4035162	+	conserved hypothetical protein		gene	gene4390	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4443
BAA_4444	BAA_4444		BAA_4444	4035875	4036303	-	iron-dependent repressor family protein	identified by match to protein family HMM PF01325%3B match to protein family HMM PF02742	gene	gene4392	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4444
BAA_4445	BAA_4445	splB	splB	4036448	4037473	-	spore photoproduct lyase	identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR00620	gene	gene4393	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4445
BAA_4446	BAA_4446		BAA_4446	4037552	4037671	-	conserved hypothetical protein		gene	gene4394	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4446
BAA_4447	BAA_4447		BAA_4447	4037745	4038593	+	hypothetical protein	identified by glimmer%3B putative	gene	gene4395	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4447
BAA_4448	BAA_4448		BAA_4448	4038622	4039458	-	putative lipoate-protein ligase A	identified by match to protein family HMM PF03099	gene	gene4396	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4448
BAA_4449	BAA_4449		BAA_4449	4039629	4040012	+	rhodanese-like domain protein	identified by match to protein family HMM PF00581	gene	gene4397	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4449
BAA_4450	BAA_4450		BAA_4450	4040253	4041239	+	sugar-binding transcriptional regulator%2C LacI family	identified by match to protein family HMM PF00356%3B match to protein family HMM PF00532	gene	gene4398	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4450
BAA_4451	BAA_4451		BAA_4451	4041342	4041917	+	transcriptional regulator%2C TetR family	identified by match to protein family HMM PF00440	gene	gene4399	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4451
BAA_4452	BAA_4452	sugE1	sugE1	4041989	4042321	+	sugE protein	identified by match to protein family HMM PF00893	gene	gene4400	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4452
BAA_4453	BAA_4453	sugE2	sugE2	4042323	4042637	+	sugE protein	identified by match to protein family HMM PF00893	gene	gene4401	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4453
BAA_4454	BAA_4454		BAA_4454	4042653	4042910	+	hypothetical protein	identified by glimmer%3B putative	gene	gene4402	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4454
BAA_4455	BAA_4455		BAA_4455	4042927	4043115	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4403	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4455
BAA_4456	BAA_4456		BAA_4456	4043364	4043957	-	putative membrane protein		gene	gene4404	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4456
BAA_4457	BAA_4457		BAA_4457	4043971	4044594	-	putative membrane protein		gene	gene4405	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4457
BAA_4458	BAA_4458		BAA_4458	4044627	4045259	-	conserved hypothetical protein		gene	gene4406	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4458
BAA_4459	BAA_4459		BAA_4459	4045274	4045462	-		putative membrane protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene4407	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4459
BAA_4460	BAA_4460		BAA_4460	4045564	4045941	-		ABC-2 type transport system permease protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene4408	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4460
BAA_4461	BAA_4461		BAA_4461	4045922	4046794	-	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene4409	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4461
BAA_4462	BAA_4462		BAA_4462	4046798	4047172	-	transcriptional regulator%2C GntR family	identified by match to protein family HMM PF00392	gene	gene4410	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4462
BAA_4463	BAA_4463		BAA_4463	4047289	4047480	-	conserved hypothetical protein		gene	gene4411	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4463
BAA_4464	BAA_4464		BAA_4464	4047551	4047754	-	conserved hypothetical protein		gene	gene4412	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4464
BAA_4465	BAA_4465	yqhK	yqhK	4048047	4049522	-	glycine cleavage system P protein%2C subunit 2	identified by match to protein family HMM PF02347	gene	gene4413	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4465
BAA_4466	BAA_4466	yqhJ	yqhJ	4049519	4050862	-	glycine cleavage system P-protein%2C subunit 1	identified by match to protein family HMM PF02347	gene	gene4414	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4466
BAA_4467	BAA_4467	gcvT	gcvT	4050883	4051983	-	glycine cleavage system T protein	identified by match to protein family HMM PF01571%3B match to protein family HMM PF08669%3B match to protein family HMM TIGR00528	gene	gene4415	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4467
BAA_4468	BAA_4468		BAA_4468	4052375	4054057	+	putative helicase	identified by match to protein family HMM PF00176%3B match to protein family HMM PF00271%3B match to protein family HMM PF04851	gene	gene4416	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4468
BAA_4469	BAA_4469		BAA_4469	4054044	4054838	+	conserved hypothetical protein		gene	gene4417	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4469
BAA_4470	BAA_4470		BAA_4470	4054874	4055005	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4418	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4470
BAA_4471	BAA_4471		BAA_4471	4055103	4055330	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4419	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4471
BAA_4472	BAA_4472		BAA_4472	4055404	4055520	+	conserved hypothetical protein		gene	gene4420	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4472
BAA_4473	BAA_4473		BAA_4473	4055650	4056282	+	putative membrane protein		gene	gene4421	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4473
BAA_4474	BAA_4474		BAA_4474	4056350	4056550	-	conserved hypothetical protein		gene	gene4422	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4474
BAA_4475	BAA_4475	aroK	aroK	4056589	4057086	-	shikimate kinase	identified by match to protein family HMM PF01202	gene	gene4423	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4475
BAA_4476	BAA_4476		BAA_4476	4057207	4057857	-	prolyl 4-hydroxylase%2C alpha subunit domain protein	identified by match to protein family HMM PF03171	gene	gene4425	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4476
BAA_4477	BAA_4477		BAA_4477	4057085	4057216	+	hypothetical protein	identified by glimmer%3B putative	gene	gene4424	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4477
BAA_4478	BAA_4478		BAA_4478	4058086	4058403	-		comG operon protein 7%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene4426	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4478
BAA_4479	BAA_4479		BAA_4479	4058400	4058750	-	putative comG operon protein 6		gene	gene4427	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4479
BAA_4480	BAA_4480		BAA_4480	4058840	4059142	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4428	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4480
BAA_4481	BAA_4481	comGD	comGD	4059135	4059590	-	comG operon protein 4	identified by match to protein family HMM PF07963%3B match to protein family HMM TIGR02532	gene	gene4429	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4481
BAA_4482	BAA_4482	comGC	comGC	4059587	4059886	-	comG operon protein 3	identified by match to protein family HMM PF07963%3B match to protein family HMM TIGR02532	gene	gene4430	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4482
BAA_4483	BAA_4483	comGB	comGB	4059898	4060929	-	comG operon protein 2	identified by match to protein family HMM PF00482	gene	gene4431	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4483
BAA_4484	BAA_4484	comGA	comGA	4060922	4061968	-	comG operon protein 1	identified by match to protein family HMM PF00437	gene	gene4432	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4484
BAA_4485	BAA_4485		BAA_4485	4062171	4062866	+	conserved hypothetical protein		gene	gene4433	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4485
BAA_4486	BAA_4486		BAA_4486	4062992	4063234	+	conserved hypothetical protein		gene	gene4434	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4486
BAA_4487	BAA_4487		BAA_4487	4063342	4064736	+	sodium:dicarboxylate symporter family protein	identified by match to protein family HMM PF00375	gene	gene4435	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4487
BAA_4488	BAA_4488		BAA_4488	4064911	4065318	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4436	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4488
BAA_4489	BAA_4489		BAA_4489	4065406	4065621	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4437	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4489
BAA_4490	BAA_4490		BAA_4490	4065874	4066185	+	conserved domain protein		gene	gene4438	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4490
BAA_4491	BAA_4491		BAA_4491	4066222	4066710	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4439	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4491
BAA_4492	BAA_4492		BAA_4492	4066790	4067164	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4440	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4492
BAA_4493	BAA_4493		BAA_4493	4067259	4067519	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4441	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4493
BAA_4494	BAA_4494	murG2	murG2	4067615	4068673	-	undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase	identified by match to protein family HMM PF03033%3B match to protein family HMM PF04101%3B match to protein family HMM TIGR01133	gene	gene4442	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4494
BAA_4495	BAA_4495	metH	metH	4068692	4072090	-	5-methyltetrahydrofolate--homocysteine methyltransferase	identified by match to protein family HMM PF00809%3B match to protein family HMM PF02310%3B match to protein family HMM PF02574%3B match to protein family HMM PF02607%3B match to protein family HMM PF02965%3B match to protein family HMM TIGR02082	gene	gene4443	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4495
BAA_4496	BAA_4496		BAA_4496	4072095	4073927	-	homocysteine S-methyltransferase domain protein/methylenetetrahydrofolate reductase family protein	identified by match to protein family HMM PF02219%3B match to protein family HMM PF02574	gene	gene4444	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4496
BAA_4499	BAA_4499	metI	metI	4074514	4075626	+	cystathionine gamma-synthase/O-acetylhomoserine thiolyase	identified by match to protein family HMM PF01041%3B match to protein family HMM PF01053%3B match to protein family HMM PF01212	gene	gene4445	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4499
BAA_4500	BAA_4500		BAA_4500	4075623	4076786	+	Cys/Met metabolism PLP-dependent enzyme	identified by match to protein family HMM PF01053	gene	gene4446	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4500
BAA_4501	BAA_4501		BAA_4501	4076915	4077376	+		isochorismatase family protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00857	pseudogene	gene4447	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4501
BAA_4502	BAA_4502		BAA_4502	4077858	4078148	+	transcriptional regulator%2C ArsR family	identified by match to protein family HMM PF01022	gene	gene4448	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4502
BAA_4503	BAA_4503		BAA_4503	4078293	4079405	-	conserved hypothetical protein	identified by match to protein family HMM PF02636	gene	gene4449	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4503
BAA_4504	BAA_4504		BAA_4504	4079415	4080041	-	metallo-beta-lactamase family protein	identified by match to protein family HMM PF00753	gene	gene4450	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4504
BAA_4505	BAA_4505		BAA_4505	4080212	4080385	+	conserved hypothetical protein		gene	gene4451	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4505
BAA_4506	BAA_4506	glcK	glcK	4080465	4081448	-	glucokinase	identified by match to protein family HMM PF00480%3B match to protein family HMM TIGR00744	gene	gene4452	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4506
BAA_4507	BAA_4507		BAA_4507	4081468	4081668	-	conserved hypothetical protein	identified by match to protein family HMM PF06014	gene	gene4453	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4507
BAA_4508	BAA_4508		BAA_4508	4081772	4082350	-	5-formyltetrahydrofolate cyclo-ligase	identified by match to protein family HMM PF01812%3B match to protein family HMM TIGR02727	gene	gene4454	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4508
BAA_4509	BAA_4509	rpmG_1	rpmG_1	4082455	4082604	-	50S ribosomal protein L33	identified by match to protein family HMM PF00471%3B match to protein family HMM TIGR01023	gene	gene4455	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4509
BAA_4510	BAA_4510		BAA_4510	4082674	4085028	-	nucleotidyl transferase family protein	identified by match to protein family HMM PF00132%3B match to protein family HMM PF00483%3B match to protein family HMM PF02878	gene	gene4456	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4510
BAA_4511	BAA_4511		BAA_4511	4085404	4086060	-	putative phosphate transport system regulatory protein PhoU	identified by match to protein family HMM PF01895%3B match to protein family HMM TIGR02135	gene	gene4457	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4511
BAA_4512	BAA_4512	pstB	pstB	4086216	4087031	-	phosphate ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR00972	gene	gene4458	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4512
BAA_4513	BAA_4513	pstA	pstA	4087060	4087926	-	phosphate ABC transporter%2C permease protein	identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR00974	gene	gene4459	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4513
BAA_4514	BAA_4514	pstC	pstC	4087928	4088878	-	phosphate ABC transporter%2C permease protein	identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR02138	gene	gene4460	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4514
BAA_4515	BAA_4515	phoX	phoX	4088906	4089823	-	phosphate ABC transporter%2C phosphate-binding protein	identified by match to protein family HMM TIGR02136	gene	gene4461	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4515
BAA_4516	BAA_4516		BAA_4516	4090155	4092275	-	penicillin-binding protein	identified by match to protein family HMM PF00905%3B match to protein family HMM PF03717	gene	gene4462	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4516
BAA_4517	BAA_4517		BAA_4517	4092385	4093662	-	putative membrane protein	identified by match to protein family HMM PF07690	gene	gene4463	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4517
BAA_4518	BAA_4518	sodA1	sodA1	4093778	4094389	-	superoxide dismutase%2C Mn	identified by match to protein family HMM PF00081%3B match to protein family HMM PF02777	gene	gene4464	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4518
BAA_4519	BAA_4519		BAA_4519	4094607	4094685	-	tRNA-Met		tRNA	gene4465	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4519
BAA_4520	BAA_4520		BAA_4520	4094975	4095685	+	conserved hypothetical protein	identified by match to protein family HMM PF06691	gene	gene4466	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4520
BAA_4521	BAA_4521		BAA_4521	4095757	4096122	+	conserved hypothetical protein		gene	gene4467	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4521
BAA_4522	BAA_4522	ispG	ispG	4096278	4097390	+	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	identified by match to protein family HMM PF04551%3B match to protein family HMM TIGR00612	gene	gene4468	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4522
BAA_4523	BAA_4523		BAA_4523	4097471	4097884	-	transcriptional regulator%2C Fur family	identified by match to protein family HMM PF01475	gene	gene4469	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4523
BAA_4524	BAA_4524		BAA_4524	4097898	4098731	-	putative cation ABC transporter%2C permease protein	identified by match to protein family HMM PF00950%3B match to protein family HMM PF01032	gene	gene4470	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4524
BAA_4525	BAA_4525		BAA_4525	4098731	4099501	-	putative cation ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene4471	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4525
BAA_4526	BAA_4526		BAA_4526	4099743	4100621	-	putative membrane protein	identified by match to protein family HMM PF02588	gene	gene4472	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4526
BAA_4527	BAA_4527		BAA_4527	4100687	4101025	+	conserved hypothetical protein		gene	gene4473	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4527
BAA_4528	BAA_4528	nfo	nfo	4101044	4101940	-	deoxyribonuclease IV (phage-T(4)-induced)	identified by match to protein family HMM PF01261%3B match to protein family HMM TIGR00587	gene	gene4474	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4528
BAA_4529	BAA_4529		BAA_4529	4102171	4103481	-	ATP-dependent RNA helicase%2C DEAD/DEAH box family	identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271	gene	gene4475	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4529
BAA_4530	BAA_4530		BAA_4530	4103813	4103986	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4476	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4530
BAA_4531	BAA_4531		BAA_4531	4103989	4104354	+		hypervariable Bacillus group-specific protein%3B VrrA gene product%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene4477	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4531
BAA_4532	BAA_4532	ispH	ispH	4104521	4105471	+	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	identified by match to protein family HMM PF02401%3B match to protein family HMM TIGR00216	gene	gene4478	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4532
BAA_4533	BAA_4533		BAA_4533	4105512	4106633	-	conserved hypothetical protein TIGR00486	identified by match to protein family HMM PF01784%3B match to protein family HMM TIGR00486	gene	gene4479	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4533
BAA_4534	BAA_4534		BAA_4534	4106630	4107337	-	conserved hypothetical protein	identified by match to protein family HMM PF04816	gene	gene4480	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4534
BAA_4535	BAA_4535	cccA	cccA	4107503	4107859	-	cytochrome c-550	identified by match to protein family HMM PF00034	gene	gene4481	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4535
BAA_4536	BAA_4536	sigA	sigA	4108245	4109366	-	RNA polymerase sigma-43 factor	identified by match to protein family HMM PF00140%3B match to protein family HMM PF03979%3B match to protein family HMM PF04539%3B match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF04967%3B match to protein family HMM TIGR02393%3B match to protein family HMM TIGR02937	gene	gene4482	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4536
BAA_4537	BAA_4537	dnaG	dnaG	4109426	4111222	-	DNA primase	identified by match to protein family HMM PF01751%3B match to protein family HMM PF01807%3B match to protein family HMM PF08275%3B match to protein family HMM TIGR01391	gene	gene4483	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4537
BAA_4538	BAA_4538		BAA_4538	4111553	4111708	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4484	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4538
BAA_4539	BAA_4539		BAA_4539	4111897	4112028	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4485	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4539
BAA_4540	BAA_4540		BAA_4540	4112076	4112888	-	conserved hypothetical protein	identified by match to protein family HMM PF03618	gene	gene4486	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4540
BAA_4541	BAA_4541		BAA_4541	4112918	4113550	-	CBS domain protein	identified by match to protein family HMM PF00571%3B match to protein family HMM PF08220%3B match to protein family HMM PF08279	gene	gene4487	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4541
BAA_4542	BAA_4542	recO	recO	4113658	4114404	-	DNA repair protein RecO	identified by match to protein family HMM PF02565%3B match to protein family HMM TIGR00613	gene	gene4488	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4542
BAA_4543	BAA_4543		BAA_4543	4114438	4114581	-	conserved hypothetical protein		gene	gene4489	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4543
BAA_4544	BAA_4544	era	era	4114758	4115663	-	GTP-binding protein Era	identified by match to protein family HMM PF00009%3B match to protein family HMM PF01926%3B match to protein family HMM PF07650%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00436	gene	gene4490	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4544
BAA_4545	BAA_4545	cdd2	cdd2	4115656	4116054	-	cytidine deaminase	identified by match to protein family HMM PF00383%3B match to protein family HMM TIGR01354	gene	gene4491	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4545
BAA_4546	BAA_4546	dgkA	dgkA	4116154	4116507	-	diacylglycerol kinase	identified by match to protein family HMM PF01219	gene	gene4492	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4546
BAA_4547	BAA_4547		BAA_4547	4116504	4116974	-	conserved hypothetical protein TIGR00043	identified by match to protein family HMM PF02130%3B match to protein family HMM TIGR00043	gene	gene4493	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4547
BAA_4548	BAA_4548		BAA_4548	4116971	4119115	-	HDIG domain protein	identified by match to protein family HMM PF01966%3B match to protein family HMM PF07697%3B match to protein family HMM PF07698%3B match to protein family HMM TIGR00277	gene	gene4494	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4548
BAA_4549	BAA_4549		BAA_4549	4119309	4120268	-	PhoH family protein	identified by match to protein family HMM PF02562	gene	gene4495	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4549
BAA_4550	BAA_4550		BAA_4550	4120272	4121471	-	sporulation protein	identified by match to protein family HMM PF06898%3B match to protein family HMM TIGR02876	gene	gene4496	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4550
BAA_4551	BAA_4551	yqfC	yqfC	4121648	4121941	-	sporulation protein YqfC	identified by match to protein family HMM PF07241%3B match to protein family HMM TIGR02856	gene	gene4497	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4551
BAA_4552	BAA_4552		BAA_4552	4122050	4122493	-	gatB/Yqey domain protein	identified by match to protein family HMM PF09424	gene	gene4498	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4552
BAA_4553	BAA_4553	rpsU	rpsU	4122509	4122682	-	30S ribosomal protein S21	identified by match to protein family HMM PF01165%3B match to protein family HMM TIGR00030	gene	gene4499	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4553
BAA_4554	BAA_4554		BAA_4554	4123013	4124365	-	RNA modification enzyme%2C MiaB family	identified by match to protein family HMM PF00919%3B match to protein family HMM PF01938%3B match to protein family HMM PF04055%3B match to protein family HMM TIGR00089%3B match to protein family HMM TIGR01579	gene	gene4501	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4554
BAA_4555	BAA_4555		BAA_4555	4124372	4125121	-	RNA methyltransferase%2C RsmE family	identified by match to protein family HMM PF04452%3B match to protein family HMM TIGR00046	gene	gene4502	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4555
BAA_4556	BAA_4556	prmA	prmA	4125267	4126205	-	ribosomal protein L11 methyltransferase	identified by match to protein family HMM PF01170%3B match to protein family HMM PF02353%3B match to protein family HMM PF05175%3B match to protein family HMM PF06325%3B match to protein family HMM PF08241%3B match to protein family HMM TIGR00406	gene	gene4503	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4556
BAA_4557	BAA_4557	dnaJ	dnaJ	4126234	4127349	-	chaperone protein dnaJ	identified by match to protein family HMM PF00226%3B match to protein family HMM PF00684%3B match to protein family HMM PF01556%3B match to protein family HMM TIGR02349	gene	gene4504	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4557
BAA_4558	BAA_4558	dnaK	dnaK	4127554	4129389	-	chaperone protein DnaK	identified by match to protein family HMM PF00012%3B match to protein family HMM TIGR02350	gene	gene4505	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4558
BAA_4559	BAA_4559	grpE	grpE	4129416	4129982	-	GrpE protein	identified by match to protein family HMM PF01025	gene	gene4506	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4559
BAA_4560	BAA_4560	hrcA	hrcA	4130097	4131113	-	heat-inducible transcription repressor HrcA	identified by match to protein family HMM PF01628%3B match to protein family HMM TIGR00331	gene	gene4507	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4560
BAA_4561	BAA_4561	hemN	hemN	4131247	4132383	-	oxygen-independent coproporphyrinogen III oxidase	identified by match to protein family HMM PF04055%3B match to protein family HMM PF06969%3B match to protein family HMM TIGR00539	gene	gene4508	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4561
BAA_4562	BAA_4562		BAA_4562	4132439	4132813	-	conserved hypothetical protein	identified by match to protein family HMM PF01638	gene	gene4509	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4562
BAA_4563	BAA_4563	lepA	lepA	4132945	4134768	-	GTP-binding protein LepA	identified by match to protein family HMM PF00009%3B match to protein family HMM PF00679%3B match to protein family HMM PF03144%3B match to protein family HMM PF06421%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR01393	gene	gene4510	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4563
BAA_4564	BAA_4564		BAA_4564	4134979	4135341	-	conserved hypothetical protein		gene	gene4511	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4564
BAA_4565	BAA_4565	gpr	gpr	4135341	4136447	-	GPR endopeptidase	identified by match to protein family HMM PF03418%3B match to protein family HMM TIGR01441	gene	gene4512	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4565
BAA_4566	BAA_4566	rpsT	rpsT	4136629	4136886	+	30S ribosomal protein S20	identified by match to protein family HMM PF01649%3B match to protein family HMM TIGR00029	gene	gene4513	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4566
BAA_4567	BAA_4567	holA	holA	4136969	4137979	-	DNA polymerase III%2C delta subunit	identified by match to protein family HMM PF06144%3B match to protein family HMM TIGR01128	gene	gene4514	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4567
BAA_4568	BAA_4568		BAA_4568	4138326	4138460	+	conserved hypothetical protein		gene	gene4515	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4568
BAA_4569	BAA_4569	comEC	comEC	4138487	4140565	-	DNA internalization-related competence protein ComEC/Rec2	identified by match to protein family HMM PF00753%3B match to protein family HMM PF03772%3B match to protein family HMM TIGR00360%3B match to protein family HMM TIGR00361	gene	gene4516	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4569
BAA_4570	BAA_4570		BAA_4570	4140624	4140788	+	hypothetical protein	identified by glimmer%3B putative	gene	gene4517	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4570
BAA_4571	BAA_4571	comEB	comEB	4140820	4141377	-	ComE operon protein 2	identified by match to protein family HMM PF00383%3B match to protein family HMM TIGR02571	gene	gene4518	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4571
BAA_4572	BAA_4572	comEA	comEA	4141440	4142036	-	comE operon protein 1	identified by match to protein family HMM PF00633%3B match to protein family HMM TIGR00426	gene	gene4519	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4572
BAA_4573	BAA_4573		BAA_4573	4142117	4142944	+	putative pyrroline-5-carboxylate reductase	identified by match to protein family HMM PF03807	gene	gene4520	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4573
BAA_4574	BAA_4574		BAA_4574	4143116	4143865	-	conserved hypothetical protein	identified by match to protein family HMM PF01209%3B match to protein family HMM PF08241%3B match to protein family HMM PF08242	gene	gene4521	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4574
BAA_4575	BAA_4575		BAA_4575	4143862	4144218	-	iojap-related protein	identified by match to protein family HMM PF02410%3B match to protein family HMM TIGR00090	gene	gene4522	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4575
BAA_4576	BAA_4576		BAA_4576	4144215	4144784	-	conserved hypothetical protein TIGR00488	identified by match to protein family HMM PF01966%3B match to protein family HMM TIGR00277%3B match to protein family HMM TIGR00488	gene	gene4523	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4576
BAA_4577	BAA_4577	nadD	nadD	4144774	4145343	-	nicotinate-nucleotide adenylyltransferase	identified by match to protein family HMM PF01467%3B match to protein family HMM TIGR00125%3B match to protein family HMM TIGR00482	gene	gene4524	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4577
BAA_4578	BAA_4578		BAA_4578	4145475	4145675	-	conserved hypothetical protein TIGR00253	identified by match to protein family HMM PF01985	gene	gene4525	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4578
BAA_4579	BAA_4579	aroE	aroE	4145680	4146606	-	shikimate dehydrogenase	identified by match to protein family HMM PF01488%3B match to protein family HMM PF08501%3B match to protein family HMM TIGR00507	gene	gene4526	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4579
BAA_4580	BAA_4580		BAA_4580	4146622	4147728	-	GTPase family protein	identified by match to protein family HMM PF01926%3B match to protein family HMM TIGR03597	gene	gene4527	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4580
BAA_4581	BAA_4581		BAA_4581	4147732	4148244	-	hydrolase%2C HAD subfamily IIIA	identified by match to protein family HMM PF09419%3B match to protein family HMM TIGR01662%3B match to protein family HMM TIGR01668	gene	gene4528	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4581
BAA_4582	BAA_4582		BAA_4582	4148492	4148635	+	conserved hypothetical protein		gene	gene4529	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4582
BAA_4583	BAA_4583	psd	psd	4148782	4149570	-	phosphatidylserine decarboxylase	identified by match to protein family HMM PF02666%3B match to protein family HMM TIGR00163	gene	gene4530	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4583
BAA_4584	BAA_4584	sigK	sigK	4149862	4150575	-	RNA polymerase sigma-27 factor	identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02846%3B match to protein family HMM TIGR02937	gene	gene4531	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4584
BAA_4585	BAA_4585		BAA_4585	4150758	4151051	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene4532	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4585
BAA_4586	BAA_4586		BAA_4586	4151240	4151650	+		group-specific protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene4533	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4586
BAA_4587	BAA_4587		BAA_4587	4151694	4153187	-	conserved hypothetical protein	identified by match to protein family HMM PF03413	gene	gene4534	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4587
BAA_4588	BAA_4588	rpmG_2	rpmG_2	4153258	4153407	-	50S ribosomal protein L33	identified by match to protein family HMM PF00471%3B match to protein family HMM TIGR01023	gene	gene4535	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4588
BAA_4589	BAA_4589		BAA_4589	4153552	4154175	-	nitroreductase family protein	identified by match to protein family HMM PF00881	gene	gene4536	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4589
BAA_4590	BAA_4590		BAA_4590	4154240	4154356	+	hypothetical protein	identified by glimmer%3B putative	gene	gene4537	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4590
BAA_4591	BAA_4591		BAA_4591	4154529	4155179	+	conserved hypothetical protein	identified by match to protein family HMM PF04607	gene	gene4538	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4591
BAA_4592	BAA_4592		BAA_4592	4155233	4155700	-	putative lipoprotein		gene	gene4539	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4592
BAA_4593	BAA_4593		BAA_4593	4155755	4157140	-	alkaline phosphatase	identified by match to protein family HMM PF00245	gene	gene4540	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4593
BAA_4594	BAA_4594		BAA_4594	4157248	4157424	-	conserved hypothetical protein		gene	gene4541	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4594
BAA_4595	BAA_4595		BAA_4595	4157402	4158235	+	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene4542	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4595
BAA_4596	BAA_4596		BAA_4596	4158251	4159135	+	hydrolase%2C alpha/beta fold family	identified by match to protein family HMM PF00561	gene	gene4543	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4596
BAA_4597	BAA_4597		BAA_4597	4159177	4159677	-	conserved hypothetical protein	identified by match to protein family HMM PF04173%3B match to protein family HMM PF07681	gene	gene4544	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4597
BAA_4598	BAA_4598		BAA_4598	4159942	4160478	-	conserved hypothetical protein		gene	gene4545	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4598
BAA_4599	BAA_4599		BAA_4599	4160497	4161099	-	putative phosphoglycerate mutase family	identified by match to protein family HMM PF00300	gene	gene4546	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4599
BAA_4600	BAA_4600		BAA_4600	4161270	4161608	+	hypothetical protein	identified by glimmer%3B putative	gene	gene4547	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4600
BAA_4601	BAA_4601		BAA_4601	4161679	4161801	+	hypothetical protein	identified by glimmer%3B putative	gene	gene4548	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4601
BAA_4602	BAA_4602		BAA_4602	4161849	4163081	-	tolB domain protein		gene	gene4549	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4602
BAA_4603	BAA_4603	vpR	vpR	4163310	4166063	+	minor extracellular protease VpR	identified by match to protein family HMM PF00082%3B match to protein family HMM PF02225%3B match to protein family HMM PF05922	gene	gene4550	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4603
BAA_4604	BAA_4604		BAA_4604	4166188	4166331	+	conserved hypothetical protein		gene	gene4551	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4604
BAA_4605	BAA_4605		BAA_4605	4166801	4168555	+	putative phenylalanine-4-hydroxylase	identified by match to protein family HMM PF00351	gene	gene4552	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4605
BAA_4606	BAA_4606		BAA_4606	4168536	4168850	+	putative pterin-4-alpha-carbinolamine dehydratase	identified by match to protein family HMM PF01329	gene	gene4553	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4606
BAA_4607	BAA_4607		BAA_4607	4168868	4169269	-		glyoxalase family protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene4554	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4607
BAA_4608	BAA_4608		BAA_4608	4169284	4169724	-		glyoxase%3B glyoxalase/bleomycin resistance protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00903	pseudogene	gene4555	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4608
BAA_4609	BAA_4609		BAA_4609	4169746	4170150	-	conserved hypothetical protein	identified by match to protein family HMM PF07681	gene	gene4556	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4609
BAA_4610	BAA_4610		BAA_4610	4170306	4170851	+	DNA-binding protein	identified by match to protein family HMM PF01381%3B match to protein family HMM PF07883	gene	gene4557	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4610
BAA_4611	BAA_4611		BAA_4611	4170884	4171261	-	maoC family protein	identified by match to protein family HMM PF01575	gene	gene4558	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4611
BAA_4612	BAA_4612		BAA_4612	4171373	4171831	-	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene4559	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4612
BAA_4613	BAA_4613		BAA_4613	4171888	4172394	-	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene4560	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4613
BAA_4614	BAA_4614		BAA_4614	4172700	4173098	-	ankyrin repeat domain protein		gene	gene4561	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4614
BAA_4615	BAA_4615		BAA_4615	4173065	4173883	-	iron compound ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene4562	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4615
BAA_4616	BAA_4616		BAA_4616	4173870	4174898	-	iron compound ABC transporter%2C permease protein	identified by match to protein family HMM PF01032	gene	gene4563	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4616
BAA_4617	BAA_4617		BAA_4617	4174904	4175851	-	iron compound ABC transporter%2C iron compound-binding protein	identified by match to protein family HMM PF01497	gene	gene4564	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4617
BAA_4618	BAA_4618		BAA_4618	4176008	4176235	-	conserved hypothetical protein		gene	gene4565	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4618
BAA_4619	BAA_4619		BAA_4619	4176362	4178965	-	aldehyde-alcohol dehydrogenase	identified by match to protein family HMM PF00465	gene	gene4566	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4619
BAA_4620	BAA_4620		BAA_4620	4179225	4180358	-	Cys/Met metabolism PLP-dependent enzyme	identified by match to protein family HMM PF01053%3B match to protein family HMM PF01212	gene	gene4567	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4620
BAA_4621	BAA_4621	cysM	cysM	4180362	4181285	-	O-acetylserine lyase	identified by match to protein family HMM PF00291	gene	gene4568	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4621
BAA_4622	BAA_4622		BAA_4622	4181368	4182063	-	MTA/SAH nucleosidase	identified by match to protein family HMM PF01048%3B match to protein family HMM TIGR01704	gene	gene4569	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4622
BAA_4623	BAA_4623		BAA_4623	4182078	4182716	-	conserved hypothetical protein	identified by match to protein family HMM PF08241%3B match to protein family HMM PF08242	gene	gene4570	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4623
BAA_4624	BAA_4624		BAA_4624	4182853	4183068	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene4571	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4624
BAA_4625	BAA_4625		BAA_4625	4183104	4183751	-	conserved hypothetical protein	identified by match to protein family HMM PF07423	gene	gene4572	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4625
BAA_4626	BAA_4626		BAA_4626	4183868	4185622	-	penicillin-binding protein	identified by match to protein family HMM PF00905%3B match to protein family HMM PF03717	gene	gene4573	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4626
BAA_4627	BAA_4627	greA	greA	4185715	4186191	-	transcription elongation factor GreA	identified by match to protein family HMM PF01272%3B match to protein family HMM PF03449%3B match to protein family HMM TIGR01462	gene	gene4574	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4627
BAA_4628	BAA_4628	udk	udk	4186470	4187108	-	uridine kinase	identified by match to protein family HMM PF00485%3B match to protein family HMM TIGR00235	gene	gene4575	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4628
BAA_4629	BAA_4629		BAA_4629	4187126	4188406	-	peptidase%2C U32 family	identified by match to protein family HMM PF01136	gene	gene4576	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4629
BAA_4630	BAA_4630		BAA_4630	4188425	4189354	-	peptidase%2C U32 family	identified by match to protein family HMM PF01136	gene	gene4577	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4630
BAA_4631	BAA_4631		BAA_4631	4189362	4190003	-	O-methyltransferase family protein	identified by match to protein family HMM PF01596%3B match to protein family HMM PF02390	gene	gene4578	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4631
BAA_4632	BAA_4632		BAA_4632	4190206	4191276	-	conserved hypothetical protein TIGR00247	identified by match to protein family HMM PF02618%3B match to protein family HMM TIGR00247	gene	gene4579	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4632
BAA_4633	BAA_4633		BAA_4633	4191494	4191772	-	conserved hypothetical protein	identified by match to protein family HMM PF06949	gene	gene4580	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4633
BAA_4634	BAA_4634		BAA_4634	4191785	4192198	-	conserved hypothetical protein TIGR00250	identified by match to protein family HMM PF03652%3B match to protein family HMM TIGR00250	gene	gene4581	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4634
BAA_4635	BAA_4635		BAA_4635	4192202	4192468	-	conserved hypothetical protein	identified by match to protein family HMM PF06135	gene	gene4582	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4635
BAA_4636	BAA_4636	alaS	alaS	4192545	4195187	-	alanine--tRNA ligase	identified by match to protein family HMM PF01411%3B match to protein family HMM PF02272%3B match to protein family HMM PF07973%3B match to protein family HMM TIGR00344	gene	gene4583	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4636
BAA_4637	BAA_4637		BAA_4637	4195670	4195939	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene4584	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4637
BAA_4638	BAA_4638		BAA_4638	4196051	4197118	-	putative membrane protein	identified by match to protein family HMM PF01594	gene	gene4585	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4638
BAA_4639	BAA_4639		BAA_4639	4197295	4197507	+	hypothetical protein	identified by glimmer%3B putative	gene	gene4586	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4639
BAA_4640	BAA_4640		BAA_4640	4197543	4197671	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4587	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4640
BAA_4641	BAA_4641		BAA_4641	4197690	4197878	-	conserved hypothetical protein		gene	gene4588	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4641
BAA_4642	BAA_4642		BAA_4642	4198006	4200342	-	putative helicase	identified by match to protein family HMM TIGR01448	gene	gene4589	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4642
BAA_4643	BAA_4643		BAA_4643	4200438	4201097	-	TPR domain protein	identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719	gene	gene4590	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4643
BAA_4644	BAA_4644	trmU	trmU	4201208	4202326	-	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase	identified by match to protein family HMM PF03054%3B match to protein family HMM TIGR00420	gene	gene4591	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4644
BAA_4645	BAA_4645		BAA_4645	4202340	4203485	-	aminotransferase%2C class V	identified by match to protein family HMM PF00266	gene	gene4592	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4645
BAA_4646	BAA_4646		BAA_4646	4203521	4203937	-	rrf2 family protein	identified by match to protein family HMM PF02082%3B match to protein family HMM TIGR00738	gene	gene4593	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4646
BAA_4647	BAA_4647		BAA_4647	4204230	4205516	+	ATPase%2C AAA family	identified by match to protein family HMM PF00004	gene	gene4594	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4647
BAA_4648	BAA_4648		BAA_4648	4205554	4206195	+	putative prespore-specific transcriptional regulator rsfA	identified by match to protein family HMM TIGR02894	gene	gene4595	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4648
BAA_4649	BAA_4649		BAA_4649	4206490	4207257	-	hesA/moeB/thiF family protein	identified by match to protein family HMM PF00899	gene	gene4596	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4649
BAA_4650	BAA_4650	aspS2	aspS2	4207607	4209382	-	aspartate--tRNA ligase	identified by match to protein family HMM PF00152%3B match to protein family HMM PF01336%3B match to protein family HMM PF02938%3B match to protein family HMM TIGR00459	gene	gene4597	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4650
BAA_4651	BAA_4651	hisS2	hisS2	4209395	4210825	-	histidine--tRNA ligase	identified by match to protein family HMM PF00587%3B match to protein family HMM PF03129%3B match to protein family HMM TIGR00442	gene	gene4598	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4651
BAA_4652	BAA_4652		BAA_4652	4211021	4211197	-	conserved hypothetical protein		gene	gene4599	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4652
BAA_4653	BAA_4653	dtd	dtd	4211383	4211823	-	D-tyrosyl-tRNA(Tyr) deacylase	identified by match to protein family HMM PF02580%3B match to protein family HMM TIGR00256	gene	gene4600	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4653
BAA_4654	BAA_4654	relA	relA	4211841	4214024	-	GTP diphosphokinase	identified by match to protein family HMM PF01842%3B match to protein family HMM PF01966%3B match to protein family HMM PF02824%3B match to protein family HMM PF04607%3B match to protein family HMM TIGR00691	gene	gene4601	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4654
BAA_4655	BAA_4655	apt	apt	4214235	4214747	-	adenine phosphoribosyltransferase	identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01090	gene	gene4602	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4655
BAA_4656	BAA_4656	recJ	recJ	4214795	4217134	-	single-stranded-DNA-specific exonuclease RecJ	identified by match to protein family HMM PF01368%3B match to protein family HMM PF02272%3B match to protein family HMM TIGR00644	gene	gene4603	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4656
BAA_4657	BAA_4657		BAA_4657	4217236	4218132	-	cation efflux family protein	identified by match to protein family HMM PF01545%3B match to protein family HMM TIGR01297	gene	gene4604	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4657
BAA_4658	BAA_4658	secDF	secDF	4218283	4220547	-	protein-export membrane protein SecDF	identified by match to protein family HMM PF02355%3B match to protein family HMM PF07549%3B match to protein family HMM TIGR00916%3B match to protein family HMM TIGR00966%3B match to protein family HMM TIGR01129	gene	gene4605	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4658
BAA_4659	BAA_4659		BAA_4659	4220818	4221102	-	conserved hypothetical protein		gene	gene4606	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4659
BAA_4660	BAA_4660	spoVB	spoVB	4221277	4222836	+	stage V sporulation protein B	identified by match to protein family HMM PF01554%3B match to protein family HMM PF01943%3B match to protein family HMM PF03023%3B match to protein family HMM TIGR02900	gene	gene4607	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4660
BAA_4661	BAA_4661		BAA_4661	4222866	4223513	-	conserved hypothetical protein	identified by match to protein family HMM PF04239	gene	gene4608	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4661
BAA_4662	BAA_4662		BAA_4662	4223616	4223999	+	conserved hypothetical protein		gene	gene4609	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4662
BAA_4663	BAA_4663	yajC	yajC	4224036	4224296	-	preprotein translocase%2C YajC subunit	identified by match to protein family HMM PF02699%3B match to protein family HMM TIGR00739	gene	gene4610	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4663
BAA_4664	BAA_4664	tgt	tgt	4224324	4225463	-	tRNA-guanine transglycosylase	identified by match to protein family HMM PF01702%3B match to protein family HMM TIGR00430%3B match to protein family HMM TIGR00449	gene	gene4611	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4664
BAA_4665	BAA_4665	queA	queA	4225476	4226528	-	S-adenosylmethionine:tRNA ribosyltransferase-isomerase	identified by match to protein family HMM PF02547%3B match to protein family HMM TIGR00113	gene	gene4612	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4665
BAA_4666	BAA_4666		BAA_4666	4226548	4226748	-	conserved hypothetical protein		gene	gene4613	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4666
BAA_4667	BAA_4667	ruvB	ruvB	4226745	4227746	-	Holliday junction DNA helicase RuvB	identified by match to protein family HMM PF00004%3B match to protein family HMM PF01078%3B match to protein family HMM PF05491%3B match to protein family HMM PF05496%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR00635	gene	gene4614	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4667
BAA_4668	BAA_4668	ruvA	ruvA	4227752	4228369	-	Holliday junction DNA helicase RuvA	identified by match to protein family HMM PF01330%3B match to protein family HMM PF07499%3B match to protein family HMM TIGR00084	gene	gene4615	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4668
BAA_4669	BAA_4669		BAA_4669	4228558	4229502	+	putative iron compound-binding protein	identified by match to protein family HMM PF01497	gene	gene4616	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4669
BAA_4670	BAA_4670		BAA_4670	4229515	4230045	-	putative bypass-of-forespore protein C	identified by match to protein family HMM PF08955%3B match to protein family HMM PF08977	gene	gene4617	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4670
BAA_4671	BAA_4671		BAA_4671	4230166	4230432	-		putative membrane protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene4618	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4671
BAA_4672	BAA_4672		BAA_4672	4230435	4231094	-		integral membrane protein DUF6%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00892	pseudogene	gene4619	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4672
BAA_4673	BAA_4673		BAA_4673	4231161	4231481	-	transcriptional regulator%2C ArsR family	identified by match to protein family HMM PF01022%3B match to protein family HMM PF08279	gene	gene4620	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4673
BAA_4674	BAA_4674		BAA_4674	4231928	4232362	+	hypothetical protein	identified by glimmer%3B putative	gene	gene4621	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4674
BAA_4675	BAA_4675		BAA_4675	4232396	4233040	-	putative forespore-specific protein	identified by match to protein family HMM PF09580	gene	gene4622	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4675
BAA_4676	BAA_4676	safA	safA	4233219	4234982	-	spore coat assembly protein SafA	identified by match to protein family HMM PF01476%3B match to protein family HMM TIGR02899	gene	gene4623	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4676
BAA_4677	BAA_4677	nadA	nadA	4235357	4236463	-	quinolinate synthetase complex%2C A subunit	identified by match to protein family HMM PF02445%3B match to protein family HMM TIGR00550	gene	gene4624	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4677
BAA_4678	BAA_4678	nadC	nadC	4236494	4237327	-	nicotinate-nucleotide diphosphorylase (carboxylating)	identified by match to protein family HMM PF01729%3B match to protein family HMM PF02749%3B match to protein family HMM TIGR00078	gene	gene4625	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4678
BAA_4679	BAA_4679	nadB	nadB	4237347	4238876	-	L-aspartate oxidase	identified by match to protein family HMM PF00890%3B match to protein family HMM PF02910%3B match to protein family HMM TIGR00551	gene	gene4626	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4679
BAA_4680	BAA_4680		BAA_4680	4239031	4240167	+	aminotransferase%2C class V	identified by match to protein family HMM PF00266%3B match to protein family HMM PF01212	gene	gene4627	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4680
BAA_4681	BAA_4681		BAA_4681	4240170	4240712	+	conserved hypothetical protein	identified by match to protein family HMM PF02829%3B match to protein family HMM PF08279	gene	gene4628	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4681
BAA_4682	BAA_4682		BAA_4682	4240794	4241441	+	conserved hypothetical protein	identified by match to protein family HMM PF03473%3B match to protein family HMM PF03475	gene	gene4629	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4682
BAA_4683	BAA_4683	pheA	pheA	4241523	4242374	-	prephenate dehydratase	identified by match to protein family HMM PF00800	gene	gene4630	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4683
BAA_4684	BAA_4684		BAA_4684	4242471	4244387	-	ABC transporter%2C permease protein	identified by match to protein family HMM PF02687	gene	gene4631	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4684
BAA_4685	BAA_4685		BAA_4685	4244437	4246359	-	ABC transporter%2C permease protein	identified by match to protein family HMM PF02687	gene	gene4632	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4685
BAA_4686	BAA_4686		BAA_4686	4246334	4247110	-	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene4633	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4686
BAA_4687	BAA_4687		BAA_4687	4247204	4247992	-		sensor histidine kinase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518	pseudogene	gene4634	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4687
BAA_4688	BAA_4688		BAA_4688	4248076	4248267	-		two-component sensor histidine kinase%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene4635	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4688
BAA_4689	BAA_4689		BAA_4689	4248278	4248985	-	DNA-binding response regulator	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486	gene	gene4636	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4689
BAA_4690	BAA_4690	obG	obG	4249125	4250411	-	spo0B-associated GTP-binding protein	identified by match to protein family HMM PF01018%3B match to protein family HMM PF01926%3B match to protein family HMM PF09269%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR02729%3B match to protein family HMM TIGR03595	gene	gene4637	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4690
BAA_4691	BAA_4691		BAA_4691	4250411	4250959	-	putative sporulation initiation phosphotransferase		gene	gene4638	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4691
BAA_4692	BAA_4692	rpmA	rpmA	4251023	4251313	-	50S ribosomal protein L27	identified by match to protein family HMM PF01016%3B match to protein family HMM TIGR00062	gene	gene4639	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4692
BAA_4693	BAA_4693		BAA_4693	4251317	4251661	-	conserved hypothetical protein	identified by match to protein family HMM PF04327	gene	gene4640	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4693
BAA_4694	BAA_4694	rplU	rplU	4251673	4251981	-	50S ribosomal protein L21	identified by match to protein family HMM PF00829%3B match to protein family HMM TIGR00061	gene	gene4641	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4694
BAA_4696	BAA_4696		BAA_4696	4252147	4253538	-	ribonuclease%2C Rne/Rng family	identified by match to protein family HMM TIGR00757	gene	gene4642	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4696
BAA_4697	BAA_4697	spoIVFB	spoIVFB	4253606	4254466	-	stage IV sporulation protein FB	identified by match to protein family HMM PF02163	gene	gene4643	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4697
BAA_4698	BAA_4698	spoIVFA	spoIVFA	4254459	4255205	-	stage IV sporulation protein FA	identified by match to protein family HMM PF01551	gene	gene4644	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4698
BAA_4699	BAA_4699	minD	minD	4255339	4256136	-	septum site-determining protein MinD	identified by match to protein family HMM PF01656%3B match to protein family HMM TIGR01968	gene	gene4645	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4699
BAA_4700	BAA_4700	minC	minC	4256139	4256825	-	septum site-determining protein MinC	identified by match to protein family HMM PF03775%3B match to protein family HMM TIGR01222	gene	gene4646	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4700
BAA_4701	BAA_4701	mreD	mreD	4256861	4257406	-	rod shape-determining protein MreD	identified by match to protein family HMM PF04093%3B match to protein family HMM TIGR03426	gene	gene4647	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4701
BAA_4702	BAA_4702	mreC	mreC	4257421	4258272	-	rod shape-determining protein MreC	identified by match to protein family HMM PF04085%3B match to protein family HMM TIGR00219	gene	gene4648	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4702
BAA_4703	BAA_4703	mreB	mreB	4258314	4259333	-	rod shape-determining protein MreB	identified by match to protein family HMM PF02491%3B match to protein family HMM PF06723%3B match to protein family HMM TIGR00904	gene	gene4649	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4703
BAA_4704	BAA_4704	radC	radC	4259492	4260169	-	DNA repair protein RadC	identified by match to protein family HMM PF00633%3B match to protein family HMM PF04002%3B match to protein family HMM TIGR00608	gene	gene4650	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4704
BAA_4705	BAA_4705	maf	maf	4260216	4260791	-	septum formation protein Maf	identified by match to protein family HMM PF02545%3B match to protein family HMM TIGR00172	gene	gene4651	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4705
BAA_4706	BAA_4706		BAA_4706	4261012	4261974	-	putative stage II sporulation protein B		gene	gene4652	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4706
BAA_4707	BAA_4707	folC	folC	4262140	4263441	-	tetrahydrofolylpolyglutamate synthase/dihydrofolate synthase	identified by match to protein family HMM PF02875%3B match to protein family HMM PF08245%3B match to protein family HMM TIGR01499	gene	gene4653	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4707
BAA_4708	BAA_4708	valS	valS	4263535	4266180	-	valine--tRNA ligase	identified by match to protein family HMM PF00133%3B match to protein family HMM PF08264%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00422	gene	gene4654	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4708
BAA_4709	BAA_4709	ysxE	ysxE	4266576	4267601	-	spore coat protein YsxE	identified by match to protein family HMM TIGR02904	gene	gene4655	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4709
BAA_4710	BAA_4710	spoVID	spoVID	4267664	4268647	-	stage VI sporulation protein D	identified by match to protein family HMM PF01476%3B match to protein family HMM TIGR02907	gene	gene4656	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4710
BAA_4711	BAA_4711	hemL2	hemL2	4268757	4270046	-	glutamate-1-semialdehyde-2%2C1-aminomutase	identified by match to protein family HMM PF00202%3B match to protein family HMM TIGR00713	gene	gene4657	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4711
BAA_4712	BAA_4712	hemB	hemB	4270046	4271035	-	porphobilinogen synthase	identified by match to protein family HMM PF00490	gene	gene4658	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4712
BAA_4713	BAA_4713	hemD	hemD	4271056	4271808	-	uroporphyrinogen-III synthase	identified by match to protein family HMM PF02602	gene	gene4659	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4713
BAA_4714	BAA_4714	hemC	hemC	4271810	4272739	-	hydroxymethylbilane synthase	identified by match to protein family HMM PF01379%3B match to protein family HMM PF03900%3B match to protein family HMM TIGR00212	gene	gene4660	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4714
BAA_4715	BAA_4715		BAA_4715	4272755	4273588	-	hemX protein	identified by match to protein family HMM PF01578	gene	gene4661	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4715
BAA_4716	BAA_4716	hemA	hemA	4273606	4274940	-	glutamyl-tRNA reductase	identified by match to protein family HMM PF00745%3B match to protein family HMM PF01488%3B match to protein family HMM PF05201%3B match to protein family HMM TIGR01035	gene	gene4662	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4716
BAA_4717	BAA_4717		BAA_4717	4275356	4275808	+	transcriptional regulator%2C MarR family	identified by match to protein family HMM PF01047	gene	gene4663	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4717
BAA_4718	BAA_4718		BAA_4718	4275811	4276227	+	organic hydroperoxide resistance protein	identified by match to protein family HMM PF02566%3B match to protein family HMM TIGR03561	gene	gene4664	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4718
BAA_4719	BAA_4719		BAA_4719	4276260	4276856	-	GTP-binding protein	identified by match to protein family HMM PF01926%3B match to protein family HMM PF08477%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR03598	gene	gene4665	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4719
BAA_4720	BAA_4720	lon	lon	4276853	4279183	-	endopeptidase LA	identified by match to protein family HMM PF00004%3B match to protein family HMM PF02190%3B match to protein family HMM PF05362%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR00763	gene	gene4666	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4720
BAA_4721	BAA_4721	lonB	lonB	4279367	4281040	-	ATP-dependent protease LonB	identified by match to protein family HMM PF00004%3B match to protein family HMM PF01078%3B match to protein family HMM PF05362%3B match to protein family HMM TIGR02902	gene	gene4667	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4721
BAA_4722	BAA_4722	clpX	clpX	4281144	4282403	-	ATP-dependent Clp protease%2C ATP-binding subunit ClpX	identified by match to protein family HMM PF00004%3B match to protein family HMM PF06689%3B match to protein family HMM PF07724%3B match to protein family HMM TIGR00382	gene	gene4668	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4722
BAA_4723	BAA_4723	tig	tig	4282668	4283945	-	trigger factor	identified by match to protein family HMM PF00254%3B match to protein family HMM PF05697%3B match to protein family HMM PF05698%3B match to protein family HMM TIGR00115	gene	gene4669	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4723
BAA_4724	BAA_4724		BAA_4724	4284256	4285254	-	conserved hypothetical protein		gene	gene4670	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4724
BAA_4725	BAA_4725		BAA_4725	4285452	4285700	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4671	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4725
BAA_4726	BAA_4726		BAA_4726	4286220	4286834	+	conserved hypothetical protein		gene	gene4672	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4726
BAA_4727	BAA_4727		BAA_4727	4286920	4287120	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4673	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4727
BAA_4728	BAA_4728		BAA_4728	4287527	4287605	-	tRNA-Arg		tRNA	gene4674	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4728
BAA_4729	BAA_4729		BAA_4729	4287606	4287679	-	tRNA-Gly		tRNA	gene4675	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4729
BAA_4730	BAA_4730		BAA_4730	4287789	4288292	-	putative phosphoesterase	identified by match to protein family HMM PF00149%3B match to protein family HMM TIGR00040	gene	gene4676	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4730
BAA_4731	BAA_4731		BAA_4731	4288306	4288914	-	HAM1 protein	identified by match to protein family HMM PF01725%3B match to protein family HMM TIGR00042	gene	gene4677	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4731
BAA_4732	BAA_4732	rph	rph	4288926	4289663	-	tRNA nucleotidyltransferase	identified by match to protein family HMM PF01138%3B match to protein family HMM PF03725%3B match to protein family HMM TIGR01966	gene	gene4678	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4732
BAA_4733	BAA_4733	gerM	gerM	4289792	4290841	-	germination protein gerM		gene	gene4679	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4733
BAA_4734	BAA_4734	racE2	racE2	4290972	4291781	-	glutamate racemase	identified by match to protein family HMM PF01177%3B match to protein family HMM TIGR00067	gene	gene4680	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4734
BAA_4735	BAA_4735		BAA_4735	4291992	4293317	-	major facilitator family transporter	identified by match to protein family HMM PF07690	gene	gene4681	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4735
BAA_4736	BAA_4736		BAA_4736	4293351	4293479	+	hypothetical protein	identified by glimmer%3B putative	gene	gene4682	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4736
BAA_4737	BAA_4737		BAA_4737	4293678	4294361	+	thiJ/pfpI family protein	identified by match to protein family HMM PF01965	gene	gene4683	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4737
BAA_4738	BAA_4738		BAA_4738	4294411	4295049	-	transcriptional regulator%2C TetR family	identified by match to protein family HMM PF00440	gene	gene4684	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4738
BAA_4739	BAA_4739		BAA_4739	4295210	4295872	-	thiJ/pfpI family protein	identified by match to protein family HMM PF01965	gene	gene4685	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4739
BAA_4740	BAA_4740		BAA_4740	4296027	4296314	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4686	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4740
BAA_4741	BAA_4741	gerE	gerE	4296488	4296712	-	germination protein GerE	identified by match to protein family HMM PF00196%3B match to protein family HMM PF08281	gene	gene4687	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4741
BAA_4742	BAA_4742		BAA_4742	4296878	4298182	-	xanthine/uracil permease family protein	identified by match to protein family HMM PF00860	gene	gene4688	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4742
BAA_4743	BAA_4743		BAA_4743	4298213	4299112	-	transporter%2C EamA family	identified by match to protein family HMM PF00892	gene	gene4689	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4743
BAA_4744	BAA_4744		BAA_4744	4299206	4300450	-	N-acyl-D-amino-acid deacylase family protein	identified by match to protein family HMM PF07969	gene	gene4690	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4744
BAA_4745	BAA_4745		BAA_4745	4300464	4301714	-	N-acyl-D-amino-acid deacylase family protein	identified by match to protein family HMM PF07969	gene	gene4691	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4745
BAA_4746	BAA_4746		BAA_4746	4301824	4303389	-	bacterial extracellular solute-binding protein%2C family 5	identified by match to protein family HMM PF00496	gene	gene4692	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4746
BAA_4747	BAA_4747		BAA_4747	4303659	4304558	+	oligopeptide ABC transporter%2C oligopeptide-binding protein	identified by match to protein family HMM PF00528	gene	gene4693	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4747
BAA_4748	BAA_4748		BAA_4748	4304574	4305494	+	oligopeptide ABC transporter%2C permease protein	identified by match to protein family HMM PF00528	gene	gene4694	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4748
BAA_4749	BAA_4749		BAA_4749	4305509	4306525	+	oligopeptide ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727	gene	gene4695	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4749
BAA_4750	BAA_4750		BAA_4750	4306527	4307513	+	oligopeptide ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727	gene	gene4696	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4750
BAA_4751	BAA_4751		BAA_4751	4307583	4308104	+		putative sensor histidine kinase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF06580	pseudogene	gene4697	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4751
BAA_4752	BAA_4752		BAA_4752	4308352	4309047	+	DNA-binding response regulator	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00165	gene	gene4698	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4752
BAA_4753	BAA_4753		BAA_4753	4309051	4309806	+		putative membrane protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene4699	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4753
BAA_4754	BAA_4754		BAA_4754	4309809	4310354	+		permease%2C sodium:solute symporter family%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene4700	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4754
BAA_4755	BAA_4755		BAA_4755	4310584	4310769	+	conserved hypothetical protein	identified by match to protein family HMM PF04024	gene	gene4701	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4755
BAA_4756	BAA_4756		BAA_4756	4310835	4311407	-	DNA-binding protein	identified by match to protein family HMM PF01381%3B match to protein family HMM PF07883	gene	gene4702	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4756
BAA_4757	BAA_4757		BAA_4757	4311508	4312473	+	putative membrane protein		gene	gene4703	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4757
BAA_4758	BAA_4758		BAA_4758	4312617	4313282	+	aquaporin Z	identified by match to protein family HMM PF00230	gene	gene4704	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4758
BAA_4759	BAA_4759		BAA_4759	4313341	4313772	-	rrf2 family protein	identified by match to protein family HMM PF02082	gene	gene4705	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4759
BAA_4760	BAA_4760		BAA_4760	4313891	4315111	-	putative membrane protein		gene	gene4706	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4760
BAA_4761	BAA_4761		BAA_4761	4315114	4315998	-	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene4707	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4761
BAA_4762	BAA_4762		BAA_4762	4316342	4317169	+	5'-nucleotidase%2C lipoprotein e(P4) family	identified by match to protein family HMM PF03767%3B match to protein family HMM TIGR01533	gene	gene4708	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4762
BAA_4763	BAA_4763		BAA_4763	4317194	4317664	-		chemotaxis protein MotB%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00691	pseudogene	gene4709	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4763
BAA_4764	BAA_4764		BAA_4764	4317652	4317981	-		chemotaxis protein MotB%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene4710	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4764
BAA_4765	BAA_4765		BAA_4765	4317971	4318765	-	chemotaxis protein MotA	identified by match to protein family HMM PF01618	gene	gene4711	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4765
BAA_4766	BAA_4766		BAA_4766	4319030	4319809	+	D-alanyl-D-alanine carboxypeptidase family protein	identified by match to protein family HMM PF02557	gene	gene4712	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4766
BAA_4767	BAA_4767		BAA_4767	4319846	4320292	-	putative 4-hydroxybenzoyl-CoA thioesterase	identified by match to protein family HMM PF03061	gene	gene4713	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4767
BAA_4768	BAA_4768	sdhB	sdhB	4320394	4321155	-	succinate dehydrogenase%2C iron-sulfur protein	identified by match to protein family HMM TIGR00384	gene	gene4714	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4768
BAA_4769	BAA_4769	sdhA	sdhA	4321148	4322941	-	succinate dehydrogenase%2C flavoprotein subunit	identified by match to protein family HMM PF00890%3B match to protein family HMM PF01134%3B match to protein family HMM PF02910%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR01811	gene	gene4715	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4769
BAA_4770	BAA_4770	sdhC	sdhC	4322955	4323581	-	succinate dehydrogenase%2C cytochrome b558 subunit	identified by match to protein family HMM TIGR02046	gene	gene4716	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4770
BAA_4771	BAA_4771		BAA_4771	4323883	4324332	+	conserved hypothetical protein		gene	gene4717	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4771
BAA_4772	BAA_4772	uvrC	uvrC	4324447	4326231	-	excinuclease ABC%2C C subunit	identified by match to protein family HMM PF01541%3B match to protein family HMM PF02151%3B match to protein family HMM PF08459%3B match to protein family HMM TIGR00194	gene	gene4718	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4772
BAA_4773	BAA_4773	trx	trx	4326380	4326694	-	thioredoxin	identified by match to protein family HMM PF00085%3B match to protein family HMM TIGR01068	gene	gene4719	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4773
BAA_4774	BAA_4774	etfA	etfA	4326906	4327883	-	electron transfer flavoprotein%2C alpha subunit	identified by match to protein family HMM PF00766%3B match to protein family HMM PF01012	gene	gene4720	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4774
BAA_4775	BAA_4775	etfB	etfB	4327920	4328693	-	electron transfer flavoprotein%2C beta subunit	identified by match to protein family HMM PF01012	gene	gene4721	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4775
BAA_4776	BAA_4776		BAA_4776	4328772	4329548	-	enoyl-CoA hydratase/isomerase family protein	identified by match to protein family HMM PF00378	gene	gene4722	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4776
BAA_4777	BAA_4777		BAA_4777	4329560	4330147	-	transcriptional regulator%2C TetR family	identified by match to protein family HMM PF00440%3B match to protein family HMM PF08359	gene	gene4723	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4777
BAA_4778	BAA_4778	fadD	fadD	4330253	4332001	-	long-chain-fatty-acid--CoA ligase	identified by match to protein family HMM PF00501	gene	gene4724	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4778
BAA_4779	BAA_4779		BAA_4779	4332128	4332877	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4725	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4779
BAA_4780	BAA_4780		BAA_4780	4332996	4333136	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4726	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4780
BAA_4781	BAA_4781		BAA_4781	4333254	4334228	+		iron compound ABC transporter%2C iron compound-binding protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01497	pseudogene	gene4727	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4781
BAA_4782	BAA_4782		BAA_4782	4334236	4336272	+	iron compound ABC transporter%2C permease protein	identified by match to protein family HMM PF01032	gene	gene4728	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4782
BAA_4783	BAA_4783		BAA_4783	4336385	4336888	+	conserved hypothetical protein	identified by match to protein family HMM PF05163	gene	gene4729	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4783
BAA_4784	BAA_4784		BAA_4784	4337025	4337357	+	putative spore coat protein C		gene	gene4730	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4784
BAA_4785	BAA_4785		BAA_4785	4337421	4338116	-	conserved hypothetical protein		gene	gene4731	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4785
BAA_4786	BAA_4786		BAA_4786	4338143	4339012	-	conserved hypothetical protein		gene	gene4732	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4786
BAA_4787	BAA_4787		BAA_4787	4339050	4339754	-	conserved hypothetical protein		gene	gene4733	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4787
BAA_4788	BAA_4788		BAA_4788	4339943	4340866	-	bacitracin ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene4734	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4788
BAA_4789	BAA_4789		BAA_4789	4340992	4341927	-	sensor histidine kinase	identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518	gene	gene4735	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4789
BAA_4790	BAA_4790		BAA_4790	4341929	4342621	-	DNA-binding response regulator	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486	gene	gene4736	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4790
BAA_4791	BAA_4791		BAA_4791	4342790	4342963	+	hypothetical protein	identified by glimmer%3B putative	gene	gene4737	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4791
BAA_4792	BAA_4792		BAA_4792	4342964	4343158	+	conserved hypothetical protein		gene	gene4738	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4792
BAA_4793	BAA_4793		BAA_4793	4343198	4344397	-	conserved hypothetical protein		gene	gene4739	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4793
BAA_4794	BAA_4794		BAA_4794	4344487	4346277	-	sodium/hydrogen exchanger family protein	identified by match to protein family HMM PF00999	gene	gene4740	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4794
BAA_4795	BAA_4795	isdG	isdG	4346588	4346911	+	heme oxygenase	identified by match to protein family HMM PF03992	gene	gene4741	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4795
BAA_4796	BAA_4796	srtB	srtB	4346977	4347741	-	sortase B	identified by match to protein family HMM PF07170%3B match to protein family HMM TIGR03064	gene	gene4742	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4796
BAA_4797	BAA_4797		BAA_4797	4347773	4348543	-	iron compound ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene4743	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4797
BAA_4798	BAA_4798		BAA_4798	4348533	4349516	-	iron compound ABC transporter%2C permease protein	identified by match to protein family HMM PF01032	gene	gene4744	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4798
BAA_4799	BAA_4799		BAA_4799	4349544	4350425	-	iron compound ABC transporter%2C iron compound-binding protein	identified by match to protein family HMM PF01497%3B match to protein family HMM TIGR03659	gene	gene4745	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4799
BAA_4800	BAA_4800		BAA_4800	4350495	4353152	-	Iron transport-associated protein	identified by match to protein family HMM PF05031%3B match to protein family HMM TIGR03063	gene	gene4746	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4800
BAA_4801	BAA_4801		BAA_4801	4353177	4353635	-		Iron transport-associated protein%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF05031	pseudogene	gene4747	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4801
BAA_4802	BAA_4802		BAA_4802	4353659	4354372	-	iron transport associated protein	identified by match to protein family HMM PF05031%3B match to protein family HMM TIGR03063%3B match to protein family HMM TIGR03656	gene	gene4748	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4802
BAA_4803	BAA_4803	brnQ6	brnQ6	4354859	4356184	-	branched-chain amino acid transport system II carrier protein	identified by match to protein family HMM PF05525%3B match to protein family HMM TIGR00796	gene	gene4749	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4803
BAA_4804	BAA_4804		BAA_4804	4356661	4357350	-	RNA pseudouridine synthase family protein	identified by match to protein family HMM PF00849%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00093	gene	gene4750	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4804
BAA_4805	BAA_4805		BAA_4805	4357546	4359906	-	MutS2 family protein	identified by match to protein family HMM PF00488%3B match to protein family HMM PF01713%3B match to protein family HMM TIGR01069	gene	gene4751	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4805
BAA_4806	BAA_4806		BAA_4806	4359926	4361647	-	PHP domain protein	identified by match to protein family HMM PF02811	gene	gene4752	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4806
BAA_4807	BAA_4807		BAA_4807	4361700	4362239	-	cvpA family protein	identified by match to protein family HMM PF02674	gene	gene4753	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4807
BAA_4808	BAA_4808		BAA_4808	4362241	4362510	-	conserved hypothetical protein	identified by match to protein family HMM PF05164	gene	gene4754	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4808
BAA_4809	BAA_4809	rnhC	rnhC	4362635	4363570	+	ribonuclease HIII	identified by match to protein family HMM PF01351%3B match to protein family HMM TIGR00716	gene	gene4755	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4809
BAA_4810	BAA_4810		BAA_4810	4363953	4364204	+	conserved domain protein		gene	gene4756	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4810
BAA_4811	BAA_4811		BAA_4811	4364245	4364379	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4757	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4811
BAA_4812	BAA_4812	asnS	asnS	4364473	4365864	-	asparagine--tRNA ligase	identified by match to protein family HMM PF00152%3B match to protein family HMM PF01336%3B match to protein family HMM TIGR00457	gene	gene4758	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4812
BAA_4813	BAA_4813	pheT	pheT	4366363	4368783	-	phenylalanyl-tRNA synthetase%2C beta subunit	identified by match to protein family HMM PF01588%3B match to protein family HMM PF03147%3B match to protein family HMM PF03483%3B match to protein family HMM PF03484%3B match to protein family HMM TIGR00472	gene	gene4759	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4813
BAA_4814	BAA_4814	pheS	pheS	4368802	4369836	-	phenylalanyl-tRNA synthetase%2C alpha subunit	identified by match to protein family HMM PF01409%3B match to protein family HMM PF02912%3B match to protein family HMM TIGR00468	gene	gene4760	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4814
BAA_4815	BAA_4815		BAA_4815	4370157	4370954	-	RNA methyltransferase%2C TrmH family	identified by match to protein family HMM PF00588%3B match to protein family HMM PF08032	gene	gene4761	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4815
BAA_4816	BAA_4816	sspI	sspI	4371037	4371246	+	small%2C acid-soluble spore protein I	identified by match to protein family HMM TIGR03092	gene	gene4762	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4816
BAA_4817	BAA_4817		BAA_4817	4371408	4371965	+	HD domain protein	identified by match to protein family HMM PF01966	gene	gene4763	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4817
BAA_4818	BAA_4818		BAA_4818	4372105	4372815	+	CAAX amino terminal protease family protein	identified by match to protein family HMM PF02517	gene	gene4764	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4818
BAA_4819	BAA_4819		BAA_4819	4372855	4373562	+	CAAX amino terminal protease family protein	identified by match to protein family HMM PF02517	gene	gene4765	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4819
BAA_4820	BAA_4820		BAA_4820	4373721	4374092	+	hypothetical protein	identified by glimmer%3B putative	gene	gene4766	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4820
BAA_4821	BAA_4821		BAA_4821	4374130	4374486	+	hypothetical protein	identified by glimmer%3B putative	gene	gene4767	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4821
BAA_4822	BAA_4822		BAA_4822	4374509	4376308	-	drug resistance transporter%2C EmrB/QacA family	identified by match to protein family HMM PF07690%3B match to protein family HMM TIGR00711	gene	gene4768	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4822
BAA_4823	BAA_4823		BAA_4823	4376321	4376974	-	conserved hypothetical protein		gene	gene4769	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4823
BAA_4824	BAA_4824		BAA_4824	4377272	4377889	+	transcriptional regulator%2C TetR family	identified by match to protein family HMM PF00440	gene	gene4770	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4824
BAA_4825	BAA_4825		BAA_4825	4377929	4379014	-	peptidase%2C M42 family	identified by match to protein family HMM PF05343	gene	gene4771	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4825
BAA_4826	BAA_4826		BAA_4826	4379084	4379575	-	conserved hypothetical protein	identified by match to protein family HMM PF08761	gene	gene4772	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4826
BAA_4827	BAA_4827	rplT	rplT	4380046	4380402	-	50S ribosomal protein L20	identified by match to protein family HMM PF00453%3B match to protein family HMM TIGR01032	gene	gene4773	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4827
BAA_4828	BAA_4828	rpmI	rpmI	4380440	4380640	-	50S ribosomal protein L35	identified by match to protein family HMM PF01632%3B match to protein family HMM TIGR00001	gene	gene4774	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4828
BAA_4829	BAA_4829	infC	infC	4380662	4381249	-	translation initiation factor IF-3	identified by match to protein family HMM PF00707%3B match to protein family HMM PF05198%3B match to protein family HMM TIGR00168	gene	gene4775	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4829
BAA_4831	BAA_4831	thrS2	thrS2	4381559	4383496	-	threonine--tRNA ligase	identified by match to protein family HMM PF00587%3B match to protein family HMM PF02824%3B match to protein family HMM PF03129%3B match to protein family HMM PF07973%3B match to protein family HMM TIGR00418	gene	gene4776	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4831
BAA_4832	BAA_4832		BAA_4832	4383803	4384684	-	conserved hypothetical protein	identified by match to protein family HMM PF08812%3B match to protein family HMM TIGR02834	gene	gene4777	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4832
BAA_4833	BAA_4833	dnaI	dnaI	4384965	4385903	-	primosomal protein DnaI	identified by match to protein family HMM PF07319	gene	gene4778	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4833
BAA_4834	BAA_4834	dnaB_1	dnaB_1	4385937	4387343	-	DNA replication protein DnaB	identified by match to protein family HMM PF07261	gene	gene4779	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4834
BAA_4835	BAA_4835	nrdR	nrdR	4387471	4387932	-	transcriptional regulator NrdR	identified by match to protein family HMM PF03477%3B match to protein family HMM TIGR00244	gene	gene4780	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4835
BAA_4836	BAA_4836	speD1	speD1	4388218	4388610	-	S-adenosylmethionine decarboxylase proenzyme	identified by match to protein family HMM PF02675%3B match to protein family HMM TIGR03330	gene	gene4781	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4836
BAA_4837	BAA_4837		BAA_4837	4388765	4388905	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4782	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4837
BAA_4838	BAA_4838	gap1	gap1	4388991	4390019	-	glyceraldehyde-3-phosphate dehydrogenase%2C type I	identified by match to protein family HMM PF00044%3B match to protein family HMM PF02800%3B match to protein family HMM TIGR01534	gene	gene4783	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4838
BAA_4839	BAA_4839	coaE	coaE	4390129	4390731	-	dephospho-CoA kinase	identified by match to protein family HMM PF01121%3B match to protein family HMM TIGR00152	gene	gene4784	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4839
BAA_4840	BAA_4840		BAA_4840	4390783	4391415	-	putative membrane protein	identified by match to protein family HMM PF02659%3B match to protein family HMM TIGR02840	gene	gene4785	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4840
BAA_4841	BAA_4841	mutM	mutM	4391488	4392318	-	DNA-formamidopyrimidine glycosylase	identified by match to protein family HMM PF01149%3B match to protein family HMM PF06827%3B match to protein family HMM PF06831%3B match to protein family HMM TIGR00577	gene	gene4786	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4841
BAA_4842	BAA_4842	polA	polA	4392331	4394964	-	DNA polymerase I	identified by match to protein family HMM PF00476%3B match to protein family HMM PF01367%3B match to protein family HMM PF02739%3B match to protein family HMM TIGR00593	gene	gene4787	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4842
BAA_4843	BAA_4843	phoR	phoR	4395251	4397014	-	sensory box histidine kinase PhoR	identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF00989%3B match to protein family HMM PF02518%3B match to protein family HMM PF08448%3B match to protein family HMM TIGR00229	gene	gene4788	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4843
BAA_4844	BAA_4844	phoP	phoP	4397007	4397726	-	DNA-binding response regulator PhoP	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486	gene	gene4789	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4844
BAA_4845	BAA_4845		BAA_4845	4397874	4398047	-		hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by glimmer%3B putative	pseudogene	gene4790	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4845
BAA_4846	BAA_4846		BAA_4846	4398216	4398347	+	hypothetical protein	identified by glimmer%3B putative	gene	gene4791	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4846
BAA_4847	BAA_4847		BAA_4847	4398404	4398877	-	maoC like domain protein	identified by match to protein family HMM PF01575	gene	gene4792	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4847
BAA_4848	BAA_4848	mdh	mdh	4399094	4400032	-	malate dehydrogenase	identified by match to protein family HMM PF00056%3B match to protein family HMM PF02866%3B match to protein family HMM TIGR01763	gene	gene4793	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4848
BAA_4849	BAA_4849	icd	icd	4400052	4401344	-	isocitrate dehydrogenase%2C NADP-dependent	identified by match to protein family HMM PF00180%3B match to protein family HMM TIGR00183	gene	gene4794	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4849
BAA_4850	BAA_4850	citZ	citZ	4401505	4402653	-	citrate synthase CitZ	identified by match to protein family HMM PF00285%3B match to protein family HMM TIGR01800	gene	gene4795	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4850
BAA_4851	BAA_4851		BAA_4851	4403041	4403502	-	conserved hypothetical protein	identified by match to protein family HMM PF04284	gene	gene4796	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4851
BAA_4852	BAA_4852	ytvI	ytvI	4403923	4405041	+	sporulation integral membrane protein YtvI	identified by match to protein family HMM PF01594%3B match to protein family HMM TIGR02872	gene	gene4797	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4852
BAA_4853	BAA_4853		BAA_4853	4405627	4406016	-	putative fxsA cytoplasmic membrane protein	identified by match to protein family HMM PF04186	gene	gene4798	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4853
BAA_4854	BAA_4854	pyk	pyk	4406216	4407973	-	pyruvate kinase	identified by match to protein family HMM PF00224%3B match to protein family HMM PF00391%3B match to protein family HMM PF02887%3B match to protein family HMM TIGR01064	gene	gene4799	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4854
BAA_4855	BAA_4855	pfkA	pfkA	4408027	4408986	-	6-phosphofructokinase	identified by match to protein family HMM PF00365%3B match to protein family HMM TIGR02482	gene	gene4800	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4855
BAA_4856	BAA_4856	accA	accA	4409115	4410089	-	acetyl-CoA carboxylase%2C carboxyl transferase%2C alpha subunit	identified by match to protein family HMM PF03255%3B match to protein family HMM TIGR00513	gene	gene4801	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4856
BAA_4857	BAA_4857	accD	accD	4410077	4410946	-	acetyl-CoA carboxylase%2C carboxyl transferase%2C beta subunit	identified by match to protein family HMM TIGR00515	gene	gene4802	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4857
BAA_4858	BAA_4858		BAA_4858	4411132	4411776	-	transcriptional regulator%2C GntR family	identified by match to protein family HMM PF00392	gene	gene4803	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4858
BAA_4859	BAA_4859		BAA_4859	4411791	4413029	-	putative malate dehydrogenase	identified by match to protein family HMM PF00390%3B match to protein family HMM PF03949	gene	gene4804	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4859
BAA_4860	BAA_4860	dnaE	dnaE	4413133	4416459	-	DNA polymerase III%2C alpha subunit	identified by match to protein family HMM PF01336%3B match to protein family HMM PF02811%3B match to protein family HMM PF07733%3B match to protein family HMM TIGR00594	gene	gene4805	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4860
BAA_4862	BAA_4862		BAA_4862	4416577	4416915	+	conserved hypothetical protein		gene	gene4806	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4862
BAA_4863	BAA_4863		BAA_4863	4416912	4417415	+	conserved hypothetical protein		gene	gene4807	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4863
BAA_4864	BAA_4864		BAA_4864	4417467	4418399	-	DHH subfamily 1 protein	identified by match to protein family HMM PF01368%3B match to protein family HMM PF02272	gene	gene4808	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4864
BAA_4865	BAA_4865		BAA_4865	4418492	4418617	-	conserved hypothetical protein		gene	gene4809	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4865
BAA_4866	BAA_4866		BAA_4866	4418639	4418944	+	conserved hypothetical protein		gene	gene4810	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4866
BAA_4867	BAA_4867		BAA_4867	4418958	4419215	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4811	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4867
BAA_4868	BAA_4868		BAA_4868	4419396	4419698	-	conserved hypothetical protein		gene	gene4812	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4868
BAA_4869	BAA_4869		BAA_4869	4419892	4421205	-	thioesterase family protein	identified by match to protein family HMM PF00571%3B match to protein family HMM PF03061%3B match to protein family HMM PF07085	gene	gene4813	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4869
BAA_4870	BAA_4870		BAA_4870	4421450	4421611	+	hypothetical protein	identified by glimmer%3B putative	gene	gene4814	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4870
BAA_4871	BAA_4871		BAA_4871	4421652	4422335	-	metallo-beta-lactamase family protein	identified by match to protein family HMM PF00753	gene	gene4815	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4871
BAA_4872	BAA_4872	pepQ2	pepQ2	4422485	4423582	+	Xaa-Pro dipeptidase	identified by match to protein family HMM PF00557%3B match to protein family HMM PF01321	gene	gene4816	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4872
BAA_4873	BAA_4873		BAA_4873	4423611	4423982	-	putative lipoprotein		gene	gene4817	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4873
BAA_4874	BAA_4874		BAA_4874	4424003	4424377	-	putative lipoprotein		gene	gene4818	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4874
BAA_4875	BAA_4875		BAA_4875	4424471	4425298	+	conserved hypothetical protein		gene	gene4819	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4875
BAA_4876	BAA_4876		BAA_4876	4425313	4425519	-	conserved domain protein		gene	gene4820	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4876
BAA_4877	BAA_4877		BAA_4877	4425911	4426366	-	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene4821	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4877
BAA_4878	BAA_4878		BAA_4878	4426439	4426783	-	conserved domain protein		gene	gene4822	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4878
BAA_4879	BAA_4879		BAA_4879	4426786	4427574	-	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene4823	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4879
BAA_4880	BAA_4880		BAA_4880	4427571	4427903	-	conserved hypothetical protein	identified by match to protein family HMM PF07883	gene	gene4824	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4880
BAA_4881	BAA_4881		BAA_4881	4427948	4428376	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4825	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4881
BAA_4882	BAA_4882		BAA_4882	4428555	4428770	+	DNA-binding protein	identified by match to protein family HMM PF01381	gene	gene4826	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4882
BAA_4883	BAA_4883		BAA_4883	4428767	4429192	+	hypothetical protein	identified by glimmer%3B putative	gene	gene4827	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4883
BAA_4884	BAA_4884	ald2	ald2	4429244	4430377	-	alanine dehydrogenase	identified by match to protein family HMM PF01262%3B match to protein family HMM PF01488%3B match to protein family HMM PF05222%3B match to protein family HMM TIGR00518	gene	gene4828	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4884
BAA_4885	BAA_4885		BAA_4885	4430591	4431349	-	putative 3-oxoacyl-(acyl-carrier-protein) reductase	identified by match to protein family HMM PF00106	gene	gene4829	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4885
BAA_4886	BAA_4886		BAA_4886	4431530	4431988	+	universal stress protein family protein	identified by match to protein family HMM PF00582	gene	gene4830	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4886
BAA_4887	BAA_4887		BAA_4887	4432030	4432725	-	putative membrane protein		gene	gene4831	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4887
BAA_4888	BAA_4888		BAA_4888	4432821	4433000	+	proA domain protein		gene	gene4832	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4888
BAA_4889	BAA_4889		BAA_4889	4433058	4433399	-	conserved hypothetical protein		gene	gene4833	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4889
BAA_4890	BAA_4890	argH2	argH2	4433498	4434886	-	argininosuccinate lyase	identified by match to protein family HMM PF00206%3B match to protein family HMM TIGR00838	gene	gene4834	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4890
BAA_4891	BAA_4891	argG	argG	4434883	4436088	-	argininosuccinate synthase	identified by match to protein family HMM PF00764%3B match to protein family HMM TIGR00032	gene	gene4835	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4891
BAA_4892	BAA_4892		BAA_4892	4436159	4436323	+		conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene4836	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4892
BAA_4893	BAA_4893		BAA_4893	4436339	4436572	+		conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene4837	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4893
BAA_4894	BAA_4894		BAA_4894	4436587	4436796	-	conserved hypothetical protein		gene	gene4838	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4894
BAA_4895	BAA_4895		BAA_4895	4437653	4438315	+	conserved hypothetical protein	identified by match to protein family HMM PF02588	gene	gene4839	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4895
BAA_4896	BAA_4896		BAA_4896	4438347	4439180	-	conserved hypothetical protein		gene	gene4840	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4896
BAA_4897	BAA_4897		BAA_4897	4439318	4439953	+	hypothetical protein	identified by glimmer%3B putative	gene	gene4841	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4897
BAA_4898	BAA_4898		BAA_4898	4440025	4440459	+	MutT/NUDIX family protein	identified by match to protein family HMM PF00293	gene	gene4842	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4898
BAA_4899	BAA_4899	ackA	ackA	4440483	4441676	-	acetate kinase	identified by match to protein family HMM PF00871%3B match to protein family HMM TIGR00016	gene	gene4843	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4899
BAA_4900	BAA_4900		BAA_4900	4441975	4442961	-	conserved hypothetical protein		gene	gene4844	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4900
BAA_4901	BAA_4901		BAA_4901	4443161	4443661	-	thiol peroxidase	identified by match to protein family HMM PF00578%3B match to protein family HMM PF08534	gene	gene4845	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4901
BAA_4902	BAA_4902		BAA_4902	4443796	4444191	-	conserved hypothetical protein	identified by match to protein family HMM PF09579%3B match to protein family HMM TIGR02874	gene	gene4846	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4902
BAA_4903	BAA_4903		BAA_4903	4444204	4444833	-	conserved hypothetical protein		gene	gene4847	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4903
BAA_4904	BAA_4904		BAA_4904	4445048	4445851	+	conserved hypothetical protein	identified by match to protein family HMM PF01513	gene	gene4848	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4904
BAA_4905	BAA_4905		BAA_4905	4446004	4447572	-	conserved hypothetical protein	identified by match to protein family HMM PF07969	gene	gene4849	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4905
BAA_4906	BAA_4906		BAA_4906	4447642	4448073	-	conserved hypothetical protein	identified by match to protein family HMM PF00903%3B match to protein family HMM PF06983	gene	gene4850	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4906
BAA_4907	BAA_4907		BAA_4907	4448176	4449762	-	putative acetyl-CoA synthetase	identified by match to protein family HMM PF00501	gene	gene4851	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4907
BAA_4908	BAA_4908	sspB	sspB	4450040	4450237	-	small%2C acid-soluble spore protein B	identified by match to protein family HMM PF00269	gene	gene4852	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4908
BAA_4909	BAA_4909	thiI	thiI	4450318	4451532	-	thiamine biosynthesis/tRNA modification protein ThiI	identified by match to protein family HMM PF02568%3B match to protein family HMM PF02926%3B match to protein family HMM PF06508%3B match to protein family HMM TIGR00342	gene	gene4853	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4909
BAA_4910	BAA_4910		BAA_4910	4451539	4452681	-	aminotransferase%2C class V	identified by match to protein family HMM PF00266	gene	gene4854	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4910
BAA_4911	BAA_4911	ezrA	ezrA	4452850	4454562	-	septation ring formation regulator	identified by match to protein family HMM PF06160	gene	gene4855	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4911
BAA_4912	BAA_4912		BAA_4912	4454534	4454656	+	hypothetical protein	identified by glimmer%3B putative	gene	gene4856	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4912
BAA_4913	BAA_4913		BAA_4913	4454770	4455612	-	transcriptional regulator%2C LysR family	identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466	gene	gene4857	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4913
BAA_4914	BAA_4914		BAA_4914	4455737	4456681	+	transporter%2C EamA family	identified by match to protein family HMM PF00892	gene	gene4858	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4914
BAA_4915	BAA_4915		BAA_4915	4456693	4456920	-		transcriptional regulator%2C TetR family%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene4859	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4915
BAA_4916	BAA_4916		BAA_4916	4456992	4457330	-		transcriptional regulator%2C N-terminus%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00440	pseudogene	gene4860	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4916
BAA_4917	BAA_4917		BAA_4917	4457478	4457957	+	conserved hypothetical protein	identified by match to protein family HMM PF01590	gene	gene4861	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4917
BAA_4918	BAA_4918	megL	megL	4458019	4459194	-	methionine gamma-lyase	identified by match to protein family HMM PF01053%3B match to protein family HMM TIGR01328	gene	gene4862	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4918
BAA_4919	BAA_4919	rpsD	rpsD	4459592	4460194	+	30S ribosomal protein S4	identified by match to protein family HMM PF00163%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR01017	gene	gene4863	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4919
BAA_4920	BAA_4920		BAA_4920	4460249	4460377	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4864	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4920
BAA_4921	BAA_4921		BAA_4921	4460528	4460830	+	conserved hypothetical protein		gene	gene4865	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4921
BAA_4922	BAA_4922	tyrS1	tyrS1	4460908	4462164	-	tyrosine--tRNA ligase	identified by match to protein family HMM PF00579%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00234	gene	gene4866	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4922
BAA_4923	BAA_4923		BAA_4923	4462541	4462786	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4867	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4923
BAA_4924	BAA_4924		BAA_4924	4462767	4463312	-	RNA polymerase sigma-70 factor%2C ECF subfamily	identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937	gene	gene4868	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4924
BAA_4925	BAA_4925		BAA_4925	4463293	4463748	-	putative lipoprotein		gene	gene4869	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4925
BAA_4926	BAA_4926	acsA	acsA	4464026	4465744	-	acetate--CoA ligase	identified by match to protein family HMM PF00501	gene	gene4870	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4926
BAA_4927	BAA_4927	acuA	acuA	4465921	4466553	+	acetoin utilization protein AcuA		gene	gene4871	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4927
BAA_4928	BAA_4928	acuB	acuB	4466571	4467215	+	acetoin utilization protein AcuB	identified by match to protein family HMM PF00571%3B match to protein family HMM PF01842	gene	gene4872	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4928
BAA_4929	BAA_4929	acuC	acuC	4467212	4468378	+	acetoin utilization protein AcuC	identified by match to protein family HMM PF00850	gene	gene4873	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4929
BAA_4930	BAA_4930		BAA_4930	4468626	4468802	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4874	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4930
BAA_4931	BAA_4931		BAA_4931	4469018	4469707	-	DNA-binding response regulator	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486	gene	gene4875	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4931
BAA_4932	BAA_4932		BAA_4932	4469709	4471163	-	sensor histidine kinase	identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518	gene	gene4876	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4932
BAA_4933	BAA_4933		BAA_4933	4471313	4471993	+	ankyrin repeat domain protein	identified by match to protein family HMM PF00023	gene	gene4877	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4933
BAA_4934	BAA_4934		BAA_4934	4472073	4472999	+	oxidoreductase%2C Gfo/Idh/MocA family	identified by match to protein family HMM PF01408	gene	gene4878	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4934
BAA_4935	BAA_4935	mscL	mscL	4473128	4473526	+	large conductance mechanosensitive channel protein	identified by match to protein family HMM PF01741%3B match to protein family HMM TIGR00220	gene	gene4879	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4935
BAA_4936	BAA_4936		BAA_4936	4473577	4473849	-	conserved domain protein		gene	gene4880	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4936
BAA_4937	BAA_4937		BAA_4937	4474000	4474296	+	minD family ATPase domain protein		gene	gene4881	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4937
BAA_4938	BAA_4938		BAA_4938	4474378	4474614	+	hypothetical protein	identified by glimmer%3B putative	gene	gene4882	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4938
BAA_4939	BAA_4939		BAA_4939	4474616	4474978	+	conserved hypothetical protein		gene	gene4883	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4939
BAA_4940	BAA_4940	ccpA	ccpA	4475013	4476011	-	catabolite control protein A	identified by match to protein family HMM PF00356%3B match to protein family HMM PF00532%3B match to protein family HMM TIGR01481	gene	gene4884	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4940
BAA_4941	BAA_4941		BAA_4941	4476540	4477556	-	putative lipoprotein	identified by match to protein family HMM PF07537	gene	gene4885	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4941
BAA_4942	BAA_4942		BAA_4942	4477674	4478000	-	conserved hypothetical protein		gene	gene4886	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4942
BAA_4943	BAA_4943		BAA_4943	4478000	4478512	-	conserved hypothetical protein	identified by match to protein family HMM PF06103	gene	gene4887	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4943
BAA_4944	BAA_4944		BAA_4944	4478700	4479815	+	putative aminopeptidase	identified by match to protein family HMM PF02073	gene	gene4888	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4944
BAA_4945	BAA_4945		BAA_4945	4479852	4480286	-	putative lipoprotein		gene	gene4889	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4945
BAA_4946	BAA_4946		BAA_4946	4480481	4480885	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4890	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4946
BAA_4947	BAA_4947		BAA_4947	4480977	4481531	-	putative ribosomal-protein-serine acetyltransferase	identified by match to protein family HMM PF00583	gene	gene4891	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4947
BAA_4948	BAA_4948	murC	murC	4481728	4483038	-	UDP-N-acetylmuramate--alanine ligase	identified by match to protein family HMM PF01225%3B match to protein family HMM PF02875%3B match to protein family HMM PF08245%3B match to protein family HMM TIGR01082	gene	gene4892	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4948
BAA_4949	BAA_4949		BAA_4949	4483291	4484409	-	conserved hypothetical protein		gene	gene4893	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4949
BAA_4950	BAA_4950		BAA_4950	4484471	4488406	-	FtsK/SpoIIIE family protein	identified by match to protein family HMM PF01580%3B match to protein family HMM PF09397	gene	gene4894	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4950
BAA_4951	BAA_4951		BAA_4951	4488628	4488972	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4895	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4951
BAA_4952	BAA_4952		BAA_4952	4489407	4490021	-	putative tRNA binding domain protein	identified by match to protein family HMM PF01588	gene	gene4896	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4952
BAA_4953	BAA_4953		BAA_4953	4490018	4490851	-	conserved hypothetical protein	identified by match to protein family HMM PF07285	gene	gene4897	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4953
BAA_4954	BAA_4954		BAA_4954	4490910	4491224	-	thioredoxin family protein	identified by match to protein family HMM PF00085	gene	gene4898	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4954
BAA_4955	BAA_4955		BAA_4955	4491308	4491817	-	conserved hypothetical protein	identified by match to protein family HMM PF01931	gene	gene4899	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4955
BAA_4956	BAA_4956		BAA_4956	4492059	4493132	-	peptidase%2C M42 family	identified by match to protein family HMM PF05343	gene	gene4900	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4956
BAA_4957	BAA_4957		BAA_4957	4493281	4493592	+	conserved hypothetical protein	identified by match to protein family HMM PF03413	gene	gene4901	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4957
BAA_4958	BAA_4958		BAA_4958	4493828	4494682	-	metallo-beta-lactamase family protein	identified by match to protein family HMM PF00753	gene	gene4902	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4958
BAA_4959	BAA_4959	trmB	trmB	4494752	4495405	-	tRNA (guanine-N(7)-)-methyltransferase	identified by match to protein family HMM PF02390%3B match to protein family HMM TIGR00091	gene	gene4903	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4959
BAA_4960	BAA_4960		BAA_4960	4495638	4495916	+	conserved hypothetical protein		gene	gene4904	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4960
BAA_4961	BAA_4961		BAA_4961	4495920	4496717	-	aminoglycoside phosphotransferase family protein	identified by match to protein family HMM PF01636%3B match to protein family HMM PF02958	gene	gene4905	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4961
BAA_4962	BAA_4962		BAA_4962	4496947	4499088	-	putative pullulanase	identified by match to protein family HMM PF00128%3B match to protein family HMM PF02922%3B match to protein family HMM TIGR02104	gene	gene4906	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4962
BAA_4963	BAA_4963		BAA_4963	4499226	4499771	-	putative 2'-5' RNA ligase family protein	identified by match to protein family HMM PF02834%3B match to protein family HMM TIGR02258	gene	gene4907	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4963
BAA_4964	BAA_4964		BAA_4964	4499875	4500201	-		Xaa-His dipeptidase%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene4908	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4964
BAA_4965	BAA_4965		BAA_4965	4500243	4501280	-		beta-Ala-Xaa dipeptidase (Beta-Ala-His dipeptidase)(Peptidase V)%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01546%3B match to protein family HMM TIGR01887	pseudogene	gene4909	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4965
BAA_4966	BAA_4966		BAA_4966	4501638	4501859	+	transcriptional regulator%2C DeoR family	identified by match to protein family HMM PF08220	gene	gene4910	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4966
BAA_4967	BAA_4967		BAA_4967	4501941	4502669	-	RNA pseudouridine synthase family protein	identified by match to protein family HMM PF00849%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00093	gene	gene4911	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4967
BAA_4968	BAA_4968		BAA_4968	4502711	4504363	-	polysaccharide synthase family protein	identified by match to protein family HMM PF01943%3B match to protein family HMM PF03023	gene	gene4912	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4968
BAA_4969	BAA_4969		BAA_4969	4504618	4505889	+	conserved hypothetical protein TIGR00275	identified by match to protein family HMM PF00070%3B match to protein family HMM PF00890%3B match to protein family HMM PF01134%3B match to protein family HMM PF01266%3B match to protein family HMM PF03486%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR00275	gene	gene4913	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4969
BAA_4970	BAA_4970		BAA_4970	4505870	4506244	+		hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by glimmer%3B putative	pseudogene	gene4914	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4970
BAA_4971	BAA_4971		BAA_4971	4506174	4507610	+	drug resistance transporter%2C EmrB/QacA family	identified by match to protein family HMM PF00083%3B match to protein family HMM PF07690%3B match to protein family HMM TIGR00711	gene	gene4915	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4971
BAA_4972	BAA_4972		BAA_4972	4507642	4507965	-	transcriptional regulator%2C ArsR family	identified by match to protein family HMM PF01022	gene	gene4916	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4972
BAA_4973	BAA_4973		BAA_4973	4507966	4508397	-	conserved hypothetical protein	identified by match to protein family HMM PF08327	gene	gene4917	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4973
BAA_4974	BAA_4974		BAA_4974	4508821	4509048	+	hypothetical protein	identified by glimmer%3B putative	gene	gene4918	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4974
BAA_4975	BAA_4975		BAA_4975	4509083	4509265	-	conserved hypothetical protein		gene	gene4919	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4975
BAA_4976	BAA_4976		BAA_4976	4509267	4509503	-	conserved hypothetical protein		gene	gene4920	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4976
BAA_4977	BAA_4977		BAA_4977	4509759	4510220	+		transcriptional regulator%2C CarD family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02559	pseudogene	gene4921	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4977
BAA_4978	BAA_4978	gdH	gdH	4510280	4511065	-	glucose 1-dehydrogenase	identified by match to protein family HMM PF00106	gene	gene4922	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4978
BAA_4979	BAA_4979	glcU	glcU	4511079	4511936	-	glucose uptake protein	identified by match to protein family HMM PF06800%3B match to protein family HMM TIGR00776	gene	gene4923	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4979
BAA_4980	BAA_4980		BAA_4980	4511973	4512392	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4924	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4980
BAA_4981	BAA_4981	moaD3	moaD3	4512486	4512719	-	molybdopterin converting factor%2C subunit 1	identified by match to protein family HMM PF02597%3B match to protein family HMM TIGR01682	gene	gene4925	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4981
BAA_4982	BAA_4982	moaE3	moaE3	4512722	4513186	-	molybdopterin converting factor%2C subunit 2	identified by match to protein family HMM PF02391	gene	gene4926	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4982
BAA_4983	BAA_4983	mobB	mobB	4513183	4513698	-	molybdopterin-guanine dinucleotide biosynthesis protein B	identified by match to protein family HMM PF03205%3B match to protein family HMM TIGR00176	gene	gene4927	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4983
BAA_4984	BAA_4984	moeA3	moeA3	4513668	4514957	-	molybdopterin biosynthesis protein MoeA	identified by match to protein family HMM PF00994%3B match to protein family HMM PF03453%3B match to protein family HMM PF03454%3B match to protein family HMM TIGR00177	gene	gene4928	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4984
BAA_4985	BAA_4985	moaC	moaC	4515041	4515526	+	molybdenum cofactor biosynthesis protein C	identified by match to protein family HMM PF01967%3B match to protein family HMM TIGR00581	gene	gene4929	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4985
BAA_4986	BAA_4986		BAA_4986	4515565	4516578	-	putative molybdopterin biosynthesis protein MoeB	identified by match to protein family HMM PF00899%3B match to protein family HMM PF05237	gene	gene4930	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4986
BAA_4987	BAA_4987		BAA_4987	4516595	4516774	-		molybdenum cofactor biosynthesis protein A%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene4931	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4987
BAA_4988	BAA_4988		BAA_4988	4516889	4517647	-		molybdenum cofactor biosynthesis protein A (Protein NarA)%3B this region contains one or more premature stops and/or frameshifts%3B identified by match to protein family HMM PF04055	pseudogene	gene4932	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4988
BAA_4989	BAA_4989		BAA_4989	4517784	4519193	-	collagen triple helix repeat domain protein	identified by match to protein family HMM PF01391	gene	gene4933	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4989
BAA_4990	BAA_4990		BAA_4990	4519367	4519504	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4934	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4990
BAA_4991	BAA_4991		BAA_4991	4519711	4519935	-	conserved hypothetical protein		gene	gene4935	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4991
BAA_4992	BAA_4992		BAA_4992	4520013	4520318	-	rhodanese-like domain protein	identified by match to protein family HMM PF00581	gene	gene4936	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4992
BAA_4993	BAA_4993		BAA_4993	4520519	4520701	+	hypothetical protein	identified by glimmer%3B putative	gene	gene4937	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4993
BAA_4994	BAA_4994		BAA_4994	4520751	4521875	-	putative homoserine O-acetyltransferase	identified by match to protein family HMM PF00561	gene	gene4938	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4994
BAA_4995	BAA_4995		BAA_4995	4522061	4522291	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4939	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4995
BAA_4996	BAA_4996		BAA_4996	4522251	4522715	+	hypothetical protein	identified by glimmer%3B putative	gene	gene4940	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4996
BAA_4997	BAA_4997	gerHA	gerHA	4522904	4524271	+	spore germination protein GerHA	identified by match to protein family HMM PF03323	gene	gene4941	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4997
BAA_4998	BAA_4998	gerHB	gerHB	4524289	4525383	+	spore germination protein GerHB	identified by match to protein family HMM PF03845%3B match to protein family HMM TIGR00912	gene	gene4942	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4998
BAA_4999	BAA_4999	gerHC	gerHC	4525359	4526438	+	spore germination protein GerHC	identified by match to protein family HMM PF05504%3B match to protein family HMM TIGR02887	gene	gene4943	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_4999
BAA_5000	BAA_5000		BAA_5000	4526529	4526714	+	hypothetical protein	identified by glimmer%3B putative	gene	gene4944	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5000
BAA_5001	BAA_5001		BAA_5001	4526904	4527326	+	conserved hypothetical protein		gene	gene4945	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5001
BAA_5002	BAA_5002		BAA_5002	4527371	4528123	-	vrrB protein		gene	gene4946	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5002
BAA_5003	BAA_5003		BAA_5003	4528200	4528352	+	hypothetical protein	identified by glimmer%3B putative	gene	gene4947	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5003
BAA_5004	BAA_5004	leuS	leuS	4528380	4530788	-	leucine--tRNA ligase	identified by match to protein family HMM PF00133%3B match to protein family HMM PF08264%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00396	gene	gene4948	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5004
BAA_5005	BAA_5005		BAA_5005	4531263	4532456	-	putative permease	identified by match to protein family HMM PF07690	gene	gene4949	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5005
BAA_5006	BAA_5006		BAA_5006	4532826	4534007	-	sodium/hydrogen exchanger family protein	identified by match to protein family HMM PF00999	gene	gene4950	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5006
BAA_5007	BAA_5007		BAA_5007	4534011	4534508	-	trkA domain protein	identified by match to protein family HMM PF02080	gene	gene4951	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5007
BAA_5008	BAA_5008		BAA_5008	4534543	4535109	-	site-specific recombinase%2C phage integrase family	identified by match to protein family HMM PF00589	gene	gene4952	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5008
BAA_5009	BAA_5009		BAA_5009	4535459	4537318	-	putative ABC transporter%2C permease protein	identified by match to protein family HMM PF02687	gene	gene4953	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5009
BAA_5010	BAA_5010		BAA_5010	4537337	4538098	-	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene4954	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5010
BAA_5011	BAA_5011		BAA_5011	4538437	4539459	-	putative membrane protein	identified by match to protein family HMM PF04171%3B match to protein family HMM PF04235	gene	gene4955	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5011
BAA_5012	BAA_5012		BAA_5012	4539596	4539745	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4956	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5012
BAA_5013	BAA_5013		BAA_5013	4539761	4540024	-	conserved hypothetical protein		gene	gene4957	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5013
BAA_5014	BAA_5014		BAA_5014	4540136	4541095	+	conserved hypothetical protein TIGR01212	identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR01212	gene	gene4958	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5014
BAA_5015	BAA_5015		BAA_5015	4541092	4541664	+	conserved hypothetical protein	identified by match to protein family HMM PF06962	gene	gene4959	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5015
BAA_5016	BAA_5016		BAA_5016	4541862	4542695	+	putative ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene4960	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5016
BAA_5017	BAA_5017		BAA_5017	4542714	4543394	+	putative membrane protein		gene	gene4961	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5017
BAA_5018	BAA_5018		BAA_5018	4543419	4544093	+	aspartate racemase family protein	identified by match to protein family HMM PF01177%3B match to protein family HMM TIGR00035	gene	gene4962	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5018
BAA_5019	BAA_5019		BAA_5019	4544249	4545550	+	conserved hypothetical protein	identified by match to protein family HMM PF03929	gene	gene4963	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5019
BAA_5020	BAA_5020		BAA_5020	4545587	4545799	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4964	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5020
BAA_5021	BAA_5021		BAA_5021	4545861	4546895	-	conserved hypothetical protein		gene	gene4965	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5021
BAA_5022	BAA_5022		BAA_5022	4546963	4547766	-	conserved hypothetical protein		gene	gene4967	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5022
BAA_5023	BAA_5023		BAA_5023	4546894	4547010	+	hypothetical protein	identified by glimmer%3B putative	gene	gene4966	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5023
BAA_5024	BAA_5024		BAA_5024	4547841	4548353	+	bacterial transferase family protein	identified by match to protein family HMM PF00132	gene	gene4968	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5024
BAA_5025	BAA_5025		BAA_5025	4548498	4549031	+	PAP2 family protein	identified by match to protein family HMM PF01569	gene	gene4969	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5025
BAA_5026	BAA_5026		BAA_5026	4549044	4550186	+	glycosyl transferase%2C group 1 family	identified by match to protein family HMM PF00534	gene	gene4970	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5026
BAA_5027	BAA_5027		BAA_5027	4550469	4551071	-	putative molybdopterin-guanine dinucleotide biosynthesis protein A		gene	gene4971	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5027
BAA_5028	BAA_5028		BAA_5028	4551068	4551577	-	putative molybdenum cofactor biosynthesis protein B	identified by match to protein family HMM PF00994%3B match to protein family HMM TIGR00177	gene	gene4972	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5028
BAA_5029	BAA_5029		BAA_5029	4551815	4551994	+	hypothetical protein	identified by glimmer%3B putative	gene	gene4973	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5029
BAA_5030	BAA_5030		BAA_5030	4552001	4552180	+	conserved hypothetical protein		gene	gene4974	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5030
BAA_5031	BAA_5031	metK	metK	4552221	4553420	-	methionine adenosyltransferase	identified by match to protein family HMM PF00438%3B match to protein family HMM PF02772%3B match to protein family HMM PF02773%3B match to protein family HMM TIGR01034	gene	gene4975	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5031
BAA_5033	BAA_5033		BAA_5033	4553824	4553937	+	hypothetical protein	identified by glimmer%3B putative	gene	gene4976	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5033
BAA_5034	BAA_5034	pckA	pckA	4553940	4555526	+	phosphoenolpyruvate carboxykinase (ATP)	identified by match to protein family HMM PF01293%3B match to protein family HMM TIGR00224	gene	gene4977	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5034
BAA_5035	BAA_5035		BAA_5035	4556222	4556605	-	putative ATP synthase protein I	identified by match to protein family HMM PF05468	gene	gene4978	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5035
BAA_5036	BAA_5036		BAA_5036	4556885	4557106	+	hypothetical protein	identified by glimmer%3B putative	gene	gene4979	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5036
BAA_5037	BAA_5037		BAA_5037	4557135	4558040	-	transporter%2C EamA family	identified by match to protein family HMM PF00892	gene	gene4980	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5037
BAA_5038	BAA_5038		BAA_5038	4558339	4558662	-	conserved hypothetical protein		gene	gene4981	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5038
BAA_5039	BAA_5039		BAA_5039	4558984	4559904	+	conserved hypothetical protein	identified by match to protein family HMM PF01784	gene	gene4982	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5039
BAA_5040	BAA_5040		BAA_5040	4560105	4561325	-	putative sensor histidine kinase	identified by match to protein family HMM PF02518	gene	gene4983	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5040
BAA_5041	BAA_5041		BAA_5041	4561322	4562578	-	sensor histidine kinase	identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518	gene	gene4984	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5041
BAA_5042	BAA_5042		BAA_5042	4562895	4563704	+	hydrolase%2C alpha/beta fold family	identified by match to protein family HMM PF00561	gene	gene4985	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5042
BAA_5043	BAA_5043		BAA_5043	4563890	4565563	-		putative sulfatase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00884	pseudogene	gene4986	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5043
BAA_5044	BAA_5044		BAA_5044	4565541	4566056	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene4987	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5044
BAA_5045	BAA_5045		BAA_5045	4566273	4566503	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4988	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5045
BAA_5046	BAA_5046		BAA_5046	4566515	4566811	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4989	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5046
BAA_5047	BAA_5047		BAA_5047	4566961	4567938	+	putative ABC transporter%2C substrate-binding protein		gene	gene4990	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5047
BAA_5048	BAA_5048		BAA_5048	4567950	4568714	+	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene4991	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5048
BAA_5049	BAA_5049		BAA_5049	4568707	4569513	+	ABC transporter%2C permease protein	identified by match to protein family HMM PF00528	gene	gene4992	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5049
BAA_5050	BAA_5050		BAA_5050	4569548	4569775	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4993	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5050
BAA_5051	BAA_5051		BAA_5051	4570000	4571115	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4994	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5051
BAA_5052	BAA_5052		BAA_5052	4571497	4571883	+		conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene4995	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5052
BAA_5053	BAA_5053		BAA_5053	4571922	4572461	-	conserved hypothetical protein		gene	gene4996	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5053
BAA_5054	BAA_5054	mutTA	mutTA	4572573	4573052	-	antimutator 8-oxo-(dGTP/GTP)ase	identified by match to protein family HMM PF00293%3B match to protein family HMM TIGR02705	gene	gene4997	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5054
BAA_5055	BAA_5055		BAA_5055	4573137	4573454	-	conserved hypothetical protein		gene	gene4998	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5055
BAA_5056	BAA_5056		BAA_5056	4573538	4573687	+	hypothetical protein	identified by glimmer%3B putative	gene	gene4999	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5056
BAA_5057	BAA_5057		BAA_5057	4573890	4574120	+	conserved hypothetical protein		gene	gene5000	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5057
BAA_5058	BAA_5058	luxS	luxS	4574615	4575088	-	autoinducer-2 production protein LuxS	identified by match to protein family HMM PF02664	gene	gene5001	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5058
BAA_5059	BAA_5059		BAA_5059	4575450	4576013	-	putative carbonic anhydrase%2C prokaryotic type	identified by match to protein family HMM PF00484	gene	gene5003	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5059
BAA_5060	BAA_5060		BAA_5060	4575217	4575453	+	conserved hypothetical protein TIGR00278	identified by match to protein family HMM PF01809%3B match to protein family HMM TIGR00278	gene	gene5002	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5060
BAA_5061	BAA_5061	cydA2	cydA2	4576238	4577587	+	cytochrome d ubiquinol oxidase%2C subunit I	identified by match to protein family HMM PF01654	gene	gene5004	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5061
BAA_5062	BAA_5062	cydB2	cydB2	4577577	4578605	+	cytochrome d ubiquinol oxidase%2C subunit II	identified by match to protein family HMM PF02322%3B match to protein family HMM TIGR00203	gene	gene5005	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5062
BAA_5063	BAA_5063		BAA_5063	4578772	4578987	-	spore germination protein GerPF-like protein		gene	gene5006	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5063
BAA_5064	BAA_5064		BAA_5064	4579002	4579127	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5007	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5064
BAA_5065	BAA_5065		BAA_5065	4579090	4579896	-	putative S-layer protein	identified by match to protein family HMM PF00395%3B match to protein family HMM PF05901	gene	gene5008	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5065
BAA_5066	BAA_5066		BAA_5066	4580606	4581643	+	conserved domain protein	identified by match to protein family HMM PF02698	gene	gene5009	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5066
BAA_5067	BAA_5067		BAA_5067	4581836	4582708	+	putative membrane protein	identified by match to protein family HMM PF02588	gene	gene5010	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5067
BAA_5068	BAA_5068		BAA_5068	4582816	4583034	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5011	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5068
BAA_5069	BAA_5069		BAA_5069	4583132	4583947	-	putative lipoprotein		gene	gene5012	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5069
BAA_5070	BAA_5070		BAA_5070	4583960	4584466	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5013	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5070
BAA_5071	BAA_5071		BAA_5071	4584488	4584892	-	conserved hypothetical protein		gene	gene5014	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5071
BAA_5072	BAA_5072		BAA_5072	4584973	4585638	-	conserved hypothetical protein	identified by match to protein family HMM PF04012	gene	gene5015	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5072
BAA_5073	BAA_5073		BAA_5073	4586039	4586617	+	putative lipoprotein		gene	gene5016	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5073
BAA_5074	BAA_5074		BAA_5074	4586861	4587028	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5017	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5074
BAA_5075	BAA_5075	feoB	feoB	4587045	4589033	-	ferrous iron transport protein B	identified by match to protein family HMM PF01926%3B match to protein family HMM PF02421%3B match to protein family HMM PF07664%3B match to protein family HMM PF07670%3B match to protein family HMM TIGR00437	gene	gene5018	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5075
BAA_5076	BAA_5076		BAA_5076	4589030	4589257	-	FeoA family protein	identified by match to protein family HMM PF04023	gene	gene5019	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5076
BAA_5078	BAA_5078		BAA_5078	4589640	4590308	+	probable proton-coupled thiamine transporter YuaJ	identified by match to protein family HMM PF09515%3B match to protein family HMM TIGR02357	gene	gene5020	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5078
BAA_5079	BAA_5079		BAA_5079	4590517	4592370	-	sensory box histidine kinase	identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518	gene	gene5021	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5079
BAA_5080	BAA_5080		BAA_5080	4592367	4593056	-	DNA-binding response regulator	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486	gene	gene5022	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5080
BAA_5081	BAA_5081		BAA_5081	4593096	4593716	-	LPXTG-site transpeptidase family protein	identified by match to protein family HMM PF04203%3B match to protein family HMM TIGR01076	gene	gene5023	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5081
BAA_5082	BAA_5082		BAA_5082	4593806	4594252	-	cell wall surface anchor family protein	identified by match to protein family HMM PF00746%3B match to protein family HMM TIGR01167	gene	gene5024	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5082
BAA_5083	BAA_5083		BAA_5083	4594429	4594761	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5025	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5083
BAA_5084	BAA_5084		BAA_5084	4594945	4595157	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5026	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5084
BAA_5085	BAA_5085	hpt2	hpt2	4595321	4595872	+	hypoxanthine phosphoribosyltransferase	identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01203	gene	gene5027	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5085
BAA_5086	BAA_5086		BAA_5086	4596107	4597009	+	bmrU protein	identified by match to protein family HMM PF00781%3B match to protein family HMM TIGR00147	gene	gene5028	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5086
BAA_5087	BAA_5087		BAA_5087	4597070	4597750	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5029	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5087
BAA_5088	BAA_5088		BAA_5088	4597932	4598927	+	conserved hypothetical protein	identified by match to protein family HMM TIGR01784	gene	gene5030	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5088
BAA_5089	BAA_5089		BAA_5089	4599079	4599495	-	conserved hypothetical protein		gene	gene5031	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5089
BAA_5090	BAA_5090		BAA_5090	4599513	4600523	-	oxidoreductase%2C aldo/keto reductase family	identified by match to protein family HMM PF00248	gene	gene5032	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5090
BAA_5091	BAA_5091		BAA_5091	4601058	4601237	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5033	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5091
BAA_5092	BAA_5092		BAA_5092	4601312	4601659	-	conserved hypothetical protein	identified by match to protein family HMM PF06486%3B match to protein family HMM TIGR01655	gene	gene5034	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5092
BAA_5093	BAA_5093		BAA_5093	4601956	4602546	-	dedA family protein	identified by match to protein family HMM PF09335	gene	gene5035	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5093
BAA_5094	BAA_5094		BAA_5094	4602546	4603124	-	ribosomal RNA adenine dimethylase domain protein		gene	gene5036	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5094
BAA_5095	BAA_5095		BAA_5095	4603267	4605216	-	efflux ABC transporter%2C permease protein	identified by match to protein family HMM PF02687	gene	gene5037	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5095
BAA_5096	BAA_5096		BAA_5096	4605203	4605973	-	efflux ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene5038	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5096
BAA_5097	BAA_5097		BAA_5097	4606274	4607152	+	transcriptional regulator%2C AraC family	identified by match to protein family HMM PF00165%3B match to protein family HMM PF06445	gene	gene5039	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5097
BAA_5098	BAA_5098		BAA_5098	4607354	4608049	+	DNA-binding response regulator	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486	gene	gene5040	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5098
BAA_5099	BAA_5099		BAA_5099	4608052	4609074	+	sensor histidine kinase	identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518	gene	gene5041	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5099
BAA_5100	BAA_5100		BAA_5100	4609169	4609408	+		putative membrane protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5042	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5100
BAA_5101	BAA_5101		BAA_5101	4609493	4609729	+		ABC transporter permease%2C fragment%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5043	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5101
BAA_5102	BAA_5102		BAA_5102	4609863	4611143	+		ABC transporter permease%2C C-terminus%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5044	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5102
BAA_5103	BAA_5103		BAA_5103	4611218	4613173	+	putative permease	identified by match to protein family HMM PF02687	gene	gene5045	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5103
BAA_5104	BAA_5104		BAA_5104	4613194	4613946	+	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene5046	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5104
BAA_5105	BAA_5105		BAA_5105	4614030	4614650	+		ABC transporter permease protein%2C N-terminus%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02687	pseudogene	gene5047	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5105
BAA_5106	BAA_5106		BAA_5106	4614755	4615921	+		putative membrane protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5048	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5106
BAA_5107	BAA_5107		BAA_5107	4615972	4616163	-	conserved hypothetical protein	identified by match to protein family HMM PF09680%3B match to protein family HMM TIGR01732	gene	gene5049	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5107
BAA_5108	BAA_5108	gntP3	gntP3	4616332	4617657	-	gluconate permease	identified by match to protein family HMM PF02447%3B match to protein family HMM PF03600%3B match to protein family HMM TIGR00791	gene	gene5050	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5108
BAA_5109	BAA_5109		BAA_5109	4617706	4618431	-	transcriptional regulator%2C GntR family	identified by match to protein family HMM PF00392%3B match to protein family HMM PF07702	gene	gene5051	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5109
BAA_5110	BAA_5110		BAA_5110	4618431	4619447	-	carbohydrate kinase%2C PfkB family	identified by match to protein family HMM PF00294	gene	gene5052	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5110
BAA_5111	BAA_5111		BAA_5111	4619440	4620195	-	conserved hypothetical protein	identified by match to protein family HMM PF07071%3B match to protein family HMM TIGR03581	gene	gene5053	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5111
BAA_5112	BAA_5112		BAA_5112	4620197	4621300	-	putative pyridoxal phosphate-dependent enzyme	identified by match to protein family HMM PF01212%3B match to protein family HMM PF03841%3B match to protein family HMM TIGR01437	gene	gene5054	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5112
BAA_5113	BAA_5113		BAA_5113	4621278	4622378	-	conserved hypothetical protein	identified by match to protein family HMM PF01979%3B match to protein family HMM TIGR03583	gene	gene5055	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5113
BAA_5114	BAA_5114		BAA_5114	4622714	4623004	-	conserved domain protein		gene	gene5056	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5114
BAA_5115	BAA_5115		BAA_5115	4623025	4623627	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5057	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5115
BAA_5116	BAA_5116		BAA_5116	4624161	4625021	-	D-alanyl-D-alanine carboxypeptidase family protein	identified by match to protein family HMM PF02557	gene	gene5058	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5116
BAA_5117	BAA_5117		BAA_5117	4625104	4626210	-	sensor histidine kinase	identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518	gene	gene5059	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5117
BAA_5118	BAA_5118		BAA_5118	4626203	4626901	-	DNA-binding response regulator	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486	gene	gene5060	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5118
BAA_5119	BAA_5119		BAA_5119	4627157	4628263	-	N-acylamino acid racemase	identified by match to protein family HMM PF01188%3B match to protein family HMM PF02746%3B match to protein family HMM TIGR01928	gene	gene5061	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5119
BAA_5120	BAA_5120		BAA_5120	4628264	4629712	-	AMP-binding protein	identified by match to protein family HMM PF00501%3B match to protein family HMM TIGR01923	gene	gene5062	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5120
BAA_5121	BAA_5121	menB	menB	4629916	4630734	-	naphthoate synthase	identified by match to protein family HMM PF00378%3B match to protein family HMM TIGR01929	gene	gene5063	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5121
BAA_5122	BAA_5122		BAA_5122	4630804	4631616	-	hydrolase%2C alpha/beta fold family	identified by match to protein family HMM PF00561	gene	gene5064	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5122
BAA_5123	BAA_5123	menD	menD	4631613	4633367	-	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase/2-oxoglutarate decarboxylase	identified by match to protein family HMM PF02776%3B match to protein family HMM TIGR00173	gene	gene5065	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5123
BAA_5124	BAA_5124	menF	menF	4633364	4634758	-	menaquinone-specific isochorismate synthase	identified by match to protein family HMM PF00425%3B match to protein family HMM TIGR00543	gene	gene5066	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5124
BAA_5125	BAA_5125		BAA_5125	4634953	4635906	+	putative 1%2C4-dihydroxy-2-naphthoate octaprenyltransferase	identified by match to protein family HMM PF01040%3B match to protein family HMM TIGR00751	gene	gene5067	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5125
BAA_5126	BAA_5126		BAA_5126	4636016	4636747	+	DNA binding protein%2C DksA/TraR family	identified by match to protein family HMM TIGR02890	gene	gene5068	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5126
BAA_5127	BAA_5127	cspD	cspD	4636792	4636992	-	cold shock protein CspD	identified by match to protein family HMM PF00313	gene	gene5069	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5127
BAA_5128	BAA_5128		BAA_5128	4637319	4638101	+	conserved hypothetical protein	identified by match to protein family HMM PF01987%3B match to protein family HMM TIGR00266	gene	gene5070	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5128
BAA_5129	BAA_5129		BAA_5129	4638266	4638988	+	lipase family protein	identified by match to protein family HMM PF01764	gene	gene5071	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5129
BAA_5130	BAA_5130		BAA_5130	4639065	4639199	+	hypothetical protein	identified by glimmer%3B putative	gene	gene5072	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5130
BAA_5131	BAA_5131	glgP	glgP	4639334	4641742	-	glycogen phosphorylase	identified by match to protein family HMM PF00343%3B match to protein family HMM TIGR02093	gene	gene5073	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5131
BAA_5132	BAA_5132	glgA	glgA	4641761	4643257	-	glycogen synthase	identified by match to protein family HMM PF00534%3B match to protein family HMM PF08323%3B match to protein family HMM TIGR02095	gene	gene5074	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5132
BAA_5133	BAA_5133	glgD	glgD	4643304	4644338	-	glycogen biosynthesis protein GlgD	identified by match to protein family HMM PF00132%3B match to protein family HMM TIGR02092	gene	gene5075	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5133
BAA_5134	BAA_5134	glgC	glgC	4644357	4645460	-	glucose-1-phosphate adenylyltransferase	identified by match to protein family HMM PF00483%3B match to protein family HMM TIGR02091	gene	gene5076	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5134
BAA_5135	BAA_5135	glgB	glgB	4645435	4647372	-	1%2C4-alpha-glucan branching enzyme	identified by match to protein family HMM PF00128%3B match to protein family HMM PF02806%3B match to protein family HMM PF02922%3B match to protein family HMM TIGR01515	gene	gene5077	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5135
BAA_5136	BAA_5136	ldh2	ldh2	4648364	4649308	-	L-lactate dehydrogenase	identified by match to protein family HMM PF00056%3B match to protein family HMM PF02866%3B match to protein family HMM TIGR01771	gene	gene5078	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5136
BAA_5137	BAA_5137		BAA_5137	4649962	4650038	-	tRNA-Glu		tRNA	gene5079	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5137
BAA_5138	BAA_5138		BAA_5138	4650043	4650135	-	tRNA-Ser		tRNA	gene5080	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5138
BAA_5139	BAA_5139		BAA_5139	4650141	4650217	-	tRNA-Asn		tRNA	gene5081	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5139
BAA_5140	BAA_5140		BAA_5140	4650223	4650301	-	tRNA-Ile		tRNA	gene5082	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5140
BAA_5141	BAA_5141		BAA_5141	4650308	4650381	-	tRNA-Gly		tRNA	gene5083	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5141
BAA_5142	BAA_5142		BAA_5142	4650394	4650471	-	tRNA-Lys		tRNA	gene5084	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5142
BAA_5143	BAA_5143		BAA_5143	4650481	4650556	-	tRNA-Thr		tRNA	gene5085	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5143
BAA_5144	BAA_5144		BAA_5144	4650571	4650646	-	tRNA-Phe		tRNA	gene5086	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5144
BAA_5145	BAA_5145		BAA_5145	4650659	4650734	-	tRNA-Asp		tRNA	gene5087	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5145
BAA_5146	BAA_5146		BAA_5146	4650735	4650813	-	tRNA-Met		tRNA	gene5088	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5146
BAA_5147	BAA_5147		BAA_5147	4650840	4650932	-	tRNA-Ser		tRNA	gene5089	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5147
BAA_5148	BAA_5148		BAA_5148	4650950	4651026	-	tRNA-Met		tRNA	gene5090	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5148
BAA_5149	BAA_5149		BAA_5149	4651030	4651108	-	tRNA-Met		tRNA	gene5091	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5149
BAA_5150	BAA_5150		BAA_5150	4651124	4651201	-	tRNA-Ala		tRNA	gene5092	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5150
BAA_5151	BAA_5151		BAA_5151	4651213	4651289	-	tRNA-Pro		tRNA	gene5093	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5151
BAA_5152	BAA_5152		BAA_5152	4651296	4651374	-	tRNA-Arg		tRNA	gene5094	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5152
BAA_5153	BAA_5153		BAA_5153	4651376	4651466	-	tRNA-Leu		tRNA	gene5095	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5153
BAA_5154	BAA_5154		BAA_5154	4651482	4651556	-	tRNA-Gly		tRNA	gene5096	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5154
BAA_5155	BAA_5155		BAA_5155	4651582	4651667	-	tRNA-Leu		tRNA	gene5097	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5155
BAA_5156	BAA_5156		BAA_5156	4651688	4651765	-	tRNA-His		tRNA	gene5098	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5156
BAA_5157	BAA_5157		BAA_5157	4651774	4651849	-	tRNA-Thr		tRNA	gene5099	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5157
BAA_5158	BAA_5158		BAA_5158	4651853	4651930	-	tRNA-Val		tRNA	gene5100	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5158
BAA_5159	BAA_5159	rrf_11	rrf_11	4651934	4652049	-	5S ribosomal RNA		rRNA	gene5101	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5159
BAA_5160	BAA_5160	rrl_11	rrl_11	4652151	4655058	-	23S ribosomal RNA		rRNA	gene5102	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5160
BAA_5161	BAA_5161		BAA_5161	4654603	4655034	+		conserved hypothetical protein%3B this region contains one or more premature stops and/or frameshifts	pseudogene	gene5103	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5161
BAA_5162	BAA_5162	rrs_11	rrs_11	4655237	4656745	-	16S ribosomal RNA		rRNA	gene5104	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5162
BAA_5163	BAA_5163	sapB	sapB	4657175	4657855	+	sapB protein	identified by match to protein family HMM PF02308	gene	gene5105	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5163
BAA_5164	BAA_5164		BAA_5164	4658933	4659346	-	conserved hypothetical protein	identified by match to protein family HMM PF08868	gene	gene5107	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5164
BAA_5165	BAA_5165		BAA_5165	4657951	4658946	+	conserved hypothetical protein	identified by match to protein family HMM PF02254%3B match to protein family HMM PF07885	gene	gene5106	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5165
BAA_5166	BAA_5166	pgi	pgi	4659454	4660806	-	glucose-6-phosphate isomerase	identified by match to protein family HMM PF00342	gene	gene5108	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5166
BAA_5167	BAA_5167		BAA_5167	4661081	4661314	+	conserved hypothetical protein	identified by match to protein family HMM PF04070	gene	gene5109	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5167
BAA_5168	BAA_5168	yugI	yugI	4661427	4661771	-	general stress protein 13	identified by match to protein family HMM PF00575	gene	gene5110	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5168
BAA_5169	BAA_5169		BAA_5169	4662024	4663214	-	aminotransferase%2C classes I and II	identified by match to protein family HMM PF00155	gene	gene5111	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5169
BAA_5170	BAA_5170		BAA_5170	4663211	4663705	-	transcriptional regulator%2C AsnC family	identified by match to protein family HMM PF01037	gene	gene5112	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5170
BAA_5171	BAA_5171		BAA_5171	4663826	4664818	+	D-isomer specific 2-hydroxyacid dehydrogenase family protein	identified by match to protein family HMM PF00389%3B match to protein family HMM PF02826	gene	gene5113	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5171
BAA_5172	BAA_5172		BAA_5172	4664928	4665767	+	hydrolase%2C alpha/beta fold family	identified by match to protein family HMM PF00561	gene	gene5114	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5172
BAA_5173	BAA_5173		BAA_5173	4665797	4666048	-	conserved hypothetical protein	identified by match to protein family HMM PF08958	gene	gene5115	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5173
BAA_5174	BAA_5174		BAA_5174	4666166	4667317	+	aminotransferase%2C classes I and II	identified by match to protein family HMM PF00155	gene	gene5116	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5174
BAA_5175	BAA_5175	sodC	sodC	4667502	4668041	-	superoxide dismutase%2C Cu-Zn	identified by match to protein family HMM PF00080	gene	gene5117	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5175
BAA_5176	BAA_5176		BAA_5176	4668110	4668286	-	conserved domain protein		gene	gene5118	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5176
BAA_5177	BAA_5177		BAA_5177	4668452	4668835	+	kinase-associated protein B	identified by match to protein family HMM PF08810	gene	gene5119	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5177
BAA_5178	BAA_5178	kapD	kapD	4668877	4669500	-	sporulation inhibitor KapD	identified by match to protein family HMM PF00929	gene	gene5120	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5178
BAA_5179	BAA_5179		BAA_5179	4669790	4671115	+	arsenical pump family protein	identified by match to protein family HMM PF00939%3B match to protein family HMM PF02040%3B match to protein family HMM PF03600	gene	gene5121	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5179
BAA_5180	BAA_5180		BAA_5180	4671174	4671641	-	conserved hypothetical protein		gene	gene5122	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5180
BAA_5181	BAA_5181		BAA_5181	4671760	4672473	+	conserved hypothetical protein	identified by match to protein family HMM PF08713	gene	gene5123	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5181
BAA_5182	BAA_5182		BAA_5182	4672644	4672775	+	hypothetical protein	identified by glimmer%3B putative	gene	gene5124	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5182
BAA_5183	BAA_5183	glyS	glyS	4672821	4674197	+	glycine--tRNA ligase	identified by match to protein family HMM PF00587%3B match to protein family HMM PF03129%3B match to protein family HMM TIGR00389	gene	gene5125	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5183
BAA_5184	BAA_5184		BAA_5184	4674235	4674618	-	putative comA operon protein	identified by match to protein family HMM PF03061%3B match to protein family HMM TIGR00369	gene	gene5126	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5184
BAA_5185	BAA_5185		BAA_5185	4674714	4675457	+	conserved hypothetical protein		gene	gene5127	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5185
BAA_5186	BAA_5186		BAA_5186	4675508	4676101	+	bioY family protein	identified by match to protein family HMM PF02632	gene	gene5128	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5186
BAA_5187	BAA_5187		BAA_5187	4676249	4677085	+	hypothetical protein	identified by glimmer%3B putative	gene	gene5129	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5187
BAA_5188	BAA_5188	gtaB	gtaB	4677191	4678078	-	UTP-glucose-1-phosphate uridylyltransferase	identified by match to protein family HMM PF00483%3B match to protein family HMM TIGR01099	gene	gene5130	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5188
BAA_5189	BAA_5189		BAA_5189	4678187	4679911	-	phosphoglucomutase/phosphomannomutase family protein	identified by match to protein family HMM PF00408%3B match to protein family HMM PF02878%3B match to protein family HMM PF02879%3B match to protein family HMM PF02880	gene	gene5131	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5189
BAA_5190	BAA_5190		BAA_5190	4680055	4680660	+	conserved hypothetical protein	identified by match to protein family HMM PF02457	gene	gene5132	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5190
BAA_5191	BAA_5191	pepA	pepA	4680743	4682227	-	leucyl aminopeptidase	identified by match to protein family HMM PF00883%3B match to protein family HMM PF02789	gene	gene5133	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5191
BAA_5192	BAA_5192		BAA_5192	4682374	4683000	-	conserved hypothetical protein	identified by match to protein family HMM PF06725	gene	gene5134	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5192
BAA_5193	BAA_5193		BAA_5193	4683087	4683404	-	conserved hypothetical protein		gene	gene5135	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5193
BAA_5194	BAA_5194		BAA_5194	4683401	4683907	-	MutT/NUDIX family protein	identified by match to protein family HMM PF00293	gene	gene5136	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5194
BAA_5195	BAA_5195		BAA_5195	4684031	4685242	-	pyridine nucleotide-disulphide oxidoreductase	identified by match to protein family HMM PF00070%3B match to protein family HMM PF07992	gene	gene5137	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5195
BAA_5196	BAA_5196		BAA_5196	4685702	4686691	+	pyridine nucleotide-disulphide oxidoreductase	identified by match to protein family HMM PF00070%3B match to protein family HMM PF07992	gene	gene5138	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5196
BAA_5197	BAA_5197		BAA_5197	4686810	4691096	-		cell wall surface anchor domain protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00746%3B match to protein family HMM PF01345%3B match to protein family HMM TIGR01167%3B match to protein family HMM TIGR01451	pseudogene	gene5139	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5197
BAA_5198	BAA_5198		BAA_5198	4691120	4692775	-		cell surface protein%2C gram positive anchor%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5140	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5198
BAA_5199	BAA_5199		BAA_5199	4693219	4693698	+	conserved hypothetical protein	identified by match to protein family HMM PF06445	gene	gene5141	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5199
BAA_5200	BAA_5200		BAA_5200	4693874	4695121	+	putative transporter	identified by match to protein family HMM PF07690	gene	gene5142	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5200
BAA_5201	BAA_5201		BAA_5201	4695132	4696019	-	conserved domain protein		gene	gene5143	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5201
BAA_5202	BAA_5202		BAA_5202	4696099	4696560	+	conserved hypothetical protein	identified by match to protein family HMM PF04463	gene	gene5144	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5202
BAA_5203	BAA_5203		BAA_5203	4696589	4696942	-	putative lipoprotein	identified by match to protein family HMM PF06486%3B match to protein family HMM TIGR01655	gene	gene5145	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5203
BAA_5204	BAA_5204		BAA_5204	4697049	4697189	-	O-methyltransferase		gene	gene5146	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5204
BAA_5205	BAA_5205		BAA_5205	4697354	4697917	+		acetyltransferase%2C GNAT family%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF00583	pseudogene	gene5147	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5205
BAA_5206	BAA_5206		BAA_5206	4698024	4698377	-	hesB/yadR/yfhF family protein	identified by match to protein family HMM PF01521%3B match to protein family HMM TIGR00049	gene	gene5148	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5206
BAA_5207	BAA_5207	dapF	dapF	4698419	4699285	-	diaminopimelate epimerase	identified by match to protein family HMM PF01678%3B match to protein family HMM TIGR00652	gene	gene5149	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5207
BAA_5208	BAA_5208		BAA_5208	4699529	4699768	-	conserved hypothetical protein	identified by match to protein family HMM PF07293	gene	gene5150	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5208
BAA_5209	BAA_5209		BAA_5209	4700120	4701190	+	pyridine nucleotide-disulphide oxidoreductase	identified by match to protein family HMM PF00070%3B match to protein family HMM PF07992	gene	gene5151	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5209
BAA_5210	BAA_5210		BAA_5210	4701421	4701594	+	stage 0 sporulation regulatory protein	identified by match to protein family HMM PF09388	gene	gene5152	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5210
BAA_5211	BAA_5211		BAA_5211	4701649	4702308	+	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene5153	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5211
BAA_5212	BAA_5212		BAA_5212	4702292	4703089	+	putative membrane protein	identified by match to protein family HMM PF03649%3B match to protein family HMM TIGR00245	gene	gene5154	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5212
BAA_5213	BAA_5213	phnA	phnA	4703270	4703611	-	alkylphosphonate utilization operon protein PhnA	identified by match to protein family HMM PF03831%3B match to protein family HMM PF08274%3B match to protein family HMM TIGR00686	gene	gene5155	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5213
BAA_5214	BAA_5214		BAA_5214	4703847	4704644	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5156	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5214
BAA_5215	BAA_5215		BAA_5215	4704943	4706601	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5157	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5215
BAA_5216	BAA_5216		BAA_5216	4706688	4707158	+	conserved hypothetical protein	identified by match to protein family HMM PF09346	gene	gene5158	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5216
BAA_5217	BAA_5217		BAA_5217	4707183	4707791	+	hypothetical protein	identified by glimmer%3B putative	gene	gene5159	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5217
BAA_5218	BAA_5218		BAA_5218	4707843	4708511	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5160	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5218
BAA_5219	BAA_5219		BAA_5219	4708625	4709302	-	CAAX amino terminal protease family protein	identified by match to protein family HMM PF02517	gene	gene5161	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5219
BAA_5220	BAA_5220		BAA_5220	4709401	4710195	-	nucleotidyltransferase domain protein	identified by match to protein family HMM PF01909	gene	gene5162	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5220
BAA_5221	BAA_5221		BAA_5221	4710248	4710556	-	conserved hypothetical protein	identified by match to protein family HMM PF07315	gene	gene5163	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5221
BAA_5222	BAA_5222		BAA_5222	4710763	4710999	+	nifU domain protein	identified by match to protein family HMM PF01106	gene	gene5164	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5222
BAA_5223	BAA_5223		BAA_5223	4711434	4711649	+	hypothetical protein	identified by glimmer%3B putative	gene	gene5165	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5223
BAA_5224	BAA_5224	cotS	cotS	4711711	4712712	-	spore coat protein cotS	identified by match to protein family HMM TIGR02905	gene	gene5166	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5224
BAA_5225	BAA_5225		BAA_5225	4712833	4713324	+	conserved hypothetical protein	identified by match to protein family HMM PF04608	gene	gene5167	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5225
BAA_5226	BAA_5226		BAA_5226	4713345	4713824	-	acetyltransferase%2C GNAT family		gene	gene5168	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5226
BAA_5227	BAA_5227		BAA_5227	4714387	4715016	+	NAD(P)H dehydrogenase%2C quinone family	identified by match to protein family HMM PF02525%3B match to protein family HMM PF03358	gene	gene5169	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5227
BAA_5228	BAA_5228		BAA_5228	4715243	4716007	-	phosphatase%2Chaloacid dehalogenase family	identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01457%3B match to protein family HMM TIGR01460	gene	gene5170	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5228
BAA_5229	BAA_5229		BAA_5229	4716117	4716749	-	transcriptional regulator%2C DeoR family	identified by match to protein family HMM PF01022%3B match to protein family HMM PF08220%3B match to protein family HMM PF08279	gene	gene5171	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5229
BAA_5230	BAA_5230		BAA_5230	4716821	4717261	-	conserved hypothetical protein	identified by match to protein family HMM PF01934	gene	gene5172	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5230
BAA_5231	BAA_5231	fbp1	fbp1	4717409	4718380	+	fructose-1%2C6-bisphosphatase%2C class II	identified by match to protein family HMM PF03320%3B match to protein family HMM TIGR00330	gene	gene5173	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5231
BAA_5232	BAA_5232		BAA_5232	4718398	4718664	+	conserved hypothetical protein		gene	gene5174	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5232
BAA_5233	BAA_5233		BAA_5233	4719037	4719474	+		conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene5175	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5233
BAA_5234	BAA_5234		BAA_5234	4719580	4719882	-	conserved hypothetical protein	identified by match to protein family HMM PF06265	gene	gene5176	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5234
BAA_5235	BAA_5235		BAA_5235	4720001	4720576	+	putative lipoprotein	identified by match to protein family HMM PF09580	gene	gene5177	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5235
BAA_5236	BAA_5236		BAA_5236	4720614	4721345	-	putative transcriptional activator tipA	identified by match to protein family HMM PF00376%3B match to protein family HMM PF07739%3B match to protein family HMM PF09278	gene	gene5178	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5236
BAA_5237	BAA_5237		BAA_5237	4721473	4722246	+	putative membrane protein		gene	gene5179	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5237
BAA_5238	BAA_5238		BAA_5238	4722269	4722664	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5180	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5238
BAA_5239	BAA_5239		BAA_5239	4722845	4723399	+	putative phosphoglycerate mutase family protein	identified by match to protein family HMM PF00300	gene	gene5181	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5239
BAA_5240	BAA_5240		BAA_5240	4723474	4723953	+	conserved hypothetical protein	identified by match to protein family HMM PF04073	gene	gene5182	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5240
BAA_5241	BAA_5241	lipA	lipA	4723974	4724870	-	lipoyl synthase	identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR00510	gene	gene5183	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5241
BAA_5242	BAA_5242		BAA_5242	4725060	4726043	+	peptidase%2C M23/M37 family	identified by match to protein family HMM PF01551	gene	gene5184	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5242
BAA_5243	BAA_5243		BAA_5243	4726080	4726811	-	conserved hypothetical protein	identified by match to protein family HMM PF09560%3B match to protein family HMM TIGR02832	gene	gene5185	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5243
BAA_5244	BAA_5244		BAA_5244	4726866	4727168	-	conserved hypothetical protein	identified by match to protein family HMM PF08827	gene	gene5186	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5244
BAA_5245	BAA_5245		BAA_5245	4727234	4728490	-	putative nucleotidase		gene	gene5187	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5245
BAA_5246	BAA_5246		BAA_5246	4728855	4729085	+	conserved hypothetical protein		gene	gene5188	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5246
BAA_5247	BAA_5247		BAA_5247	4729349	4729678	+	transcriptional regulator%2C PadR family	identified by match to protein family HMM PF03551	gene	gene5189	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5247
BAA_5248	BAA_5248		BAA_5248	4729678	4730424	+	conserved hypothetical protein	identified by match to protein family HMM PF04892	gene	gene5190	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5248
BAA_5249	BAA_5249	sufB	sufB	4730780	4732177	-	FeS assembly protein SufB	identified by match to protein family HMM PF01458%3B match to protein family HMM TIGR01980	gene	gene5191	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5249
BAA_5250	BAA_5250	sufA	sufA	4732226	4732657	-	iron-sulfur cluster assembly scaffold SufA	identified by match to protein family HMM PF01592%3B match to protein family HMM TIGR01994	gene	gene5192	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5250
BAA_5251	BAA_5251	sufS	sufS	4732647	4733867	-	cysteine desulfurase SufS	identified by match to protein family HMM PF00266%3B match to protein family HMM PF01212%3B match to protein family HMM TIGR01979	gene	gene5193	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5251
BAA_5252	BAA_5252	sufD	sufD	4733867	4735159	-	FeS assembly protein SufD	identified by match to protein family HMM PF01458%3B match to protein family HMM TIGR01981	gene	gene5194	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5252
BAA_5253	BAA_5253	sufC	sufC	4735175	4735960	-	FeS assembly ATPase SufC	identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR01978	gene	gene5195	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5253
BAA_5254	BAA_5254		BAA_5254	4736199	4737005	-	putative ABC transporter%2C substrate-binding protein	identified by match to protein family HMM PF03180	gene	gene5196	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5254
BAA_5255	BAA_5255		BAA_5255	4737078	4737890	-	putative ABC transporter%2C substrate-binding protein	identified by match to protein family HMM PF03180	gene	gene5197	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5255
BAA_5256	BAA_5256		BAA_5256	4737914	4738579	-	ABC transporter%2C permease protein	identified by match to protein family HMM PF00528	gene	gene5198	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5256
BAA_5257	BAA_5257		BAA_5257	4738572	4739597	-	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005%3B match to protein family HMM PF09383	gene	gene5199	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5257
BAA_5259	BAA_5259		BAA_5259	4739808	4739948	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5200	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5259
BAA_5260	BAA_5260		BAA_5260	4740129	4740473	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5201	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5260
BAA_5261	BAA_5261		BAA_5261	4740628	4740936	-	putative thioredoxin		gene	gene5202	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5261
BAA_5262	BAA_5262		BAA_5262	4740940	4741284	-	Toprim domain protein	identified by match to protein family HMM PF01751	gene	gene5203	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5262
BAA_5263	BAA_5263	gcvH	gcvH	4741781	4742164	-	glycine cleavage system H protein	identified by match to protein family HMM PF01597%3B match to protein family HMM TIGR00527	gene	gene5204	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5263
BAA_5264	BAA_5264		BAA_5264	4742206	4742571	-	conserved hypothetical protein	identified by match to protein family HMM PF03960%3B match to protein family HMM TIGR01617	gene	gene5205	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5264
BAA_5265	BAA_5265		BAA_5265	4743102	4743341	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5206	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5265
BAA_5266	BAA_5266		BAA_5266	4743471	4743809	-		hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by glimmer%3B putative	pseudogene	gene5207	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5266
BAA_5267	BAA_5267		BAA_5267	4743851	4744240	-	putative lipoprotein		gene	gene5208	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5267
BAA_5268	BAA_5268		BAA_5268	4744770	4745000	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5209	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5268
BAA_5269	BAA_5269		BAA_5269	4745053	4745583	-	putative lipoprotein		gene	gene5210	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5269
BAA_5270	BAA_5270		BAA_5270	4745727	4746374	+	PAP2 family protein		gene	gene5211	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5270
BAA_5271	BAA_5271		BAA_5271	4746431	4747444	-	conserved hypothetical protein		gene	gene5212	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5271
BAA_5272	BAA_5272	ldh3	ldh3	4747467	4748417	-	L-lactate dehydrogenase	identified by match to protein family HMM PF00056%3B match to protein family HMM PF02866%3B match to protein family HMM TIGR01771	gene	gene5213	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5272
BAA_5273	BAA_5273		BAA_5273	4748663	4748911	-	spore coat protein F-related protein	identified by match to protein family HMM PF07875	gene	gene5214	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5273
BAA_5274	BAA_5274		BAA_5274	4748925	4749110	-	conserved hypothetical protein		gene	gene5215	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5274
BAA_5275	BAA_5275		BAA_5275	4749257	4749970	-	CAAX amino terminal protease family protein	identified by match to protein family HMM PF02517	gene	gene5216	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5275
BAA_5276	BAA_5276		BAA_5276	4750558	4751106	-	putative transcriptional regulator	identified by match to protein family HMM PF00440	gene	gene5217	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5276
BAA_5277	BAA_5277		BAA_5277	4751110	4751832	-	metallo-beta-lactamase family protein	identified by match to protein family HMM PF00753	gene	gene5218	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5277
BAA_5278	BAA_5278		BAA_5278	4751971	4753755	-	acyl-CoA dehydrogenase	identified by match to protein family HMM PF00441%3B match to protein family HMM PF02770%3B match to protein family HMM PF02771%3B match to protein family HMM PF08028	gene	gene5219	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5278
BAA_5279	BAA_5279		BAA_5279	4753908	4754024	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5220	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5279
BAA_5280	BAA_5280		BAA_5280	4754030	4755202	-	acetyl-CoA acetyltransferase	identified by match to protein family HMM PF00108%3B match to protein family HMM PF02803%3B match to protein family HMM TIGR01930	gene	gene5221	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5280
BAA_5281	BAA_5281		BAA_5281	4755224	4757605	-	3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase/isomerase family protein	identified by match to protein family HMM PF00378%3B match to protein family HMM PF00725%3B match to protein family HMM PF02737	gene	gene5222	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5281
BAA_5282	BAA_5282		BAA_5282	4757841	4757987	+	hypothetical protein	identified by glimmer%3B putative	gene	gene5223	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5282
BAA_5283	BAA_5283		BAA_5283	4758075	4758914	+	D-alanyl-D-alanine carboxypeptidase family protein	identified by match to protein family HMM PF00768%3B match to protein family HMM PF00905	gene	gene5224	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5283
BAA_5284	BAA_5284		BAA_5284	4758937	4759854	-	proline dehydrogenase family protein	identified by match to protein family HMM PF01619	gene	gene5225	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5284
BAA_5285	BAA_5285		BAA_5285	4760164	4760409	-	conserved hypothetical protein		gene	gene5226	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5285
BAA_5286	BAA_5286		BAA_5286	4760458	4760760	-	conserved hypothetical protein TIGR00106	identified by match to protein family HMM PF01910%3B match to protein family HMM TIGR00106	gene	gene5227	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5286
BAA_5287	BAA_5287		BAA_5287	4760838	4762847	-	methyl-accepting chemotaxis protein	identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672%3B match to protein family HMM PF02743	gene	gene5228	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5287
BAA_5288	BAA_5288		BAA_5288	4763027	4763785	+	conserved hypothetical protein	identified by match to protein family HMM PF01978	gene	gene5229	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5288
BAA_5289	BAA_5289		BAA_5289	4763816	4765714	-	cell wall surface anchor family protein	identified by match to protein family HMM PF05738%3B match to protein family HMM TIGR01167	gene	gene5230	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5289
BAA_5290	BAA_5290		BAA_5290	4765970	4766140	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5231	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5290
BAA_5291	BAA_5291		BAA_5291	4766220	4767392	-	major facilitator family transporter	identified by match to protein family HMM PF00083%3B match to protein family HMM PF07690	gene	gene5232	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5291
BAA_5292	BAA_5292		BAA_5292	4767512	4768828	-	amino acid permease family protein	identified by match to protein family HMM PF00324	gene	gene5233	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5292
BAA_5293	BAA_5293		BAA_5293	4769424	4770239	-	conserved domain protein		gene	gene5234	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5293
BAA_5294	BAA_5294	spoIIIJ1	spoIIIJ1	4770369	4771151	-	stage III sporulation protein J	identified by match to protein family HMM PF02096%3B match to protein family HMM TIGR03592	gene	gene5235	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5294
BAA_5295	BAA_5295		BAA_5295	4771180	4771464	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5236	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5295
BAA_5296	BAA_5296		BAA_5296	4771742	4772635	+	conserved hypothetical protein	identified by match to protein family HMM PF02588	gene	gene5237	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5296
BAA_5297	BAA_5297		BAA_5297	4772967	4773353	+	hypothetical protein	identified by glimmer%3B putative	gene	gene5238	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5297
BAA_5298	BAA_5298		BAA_5298	4773602	4773742	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5239	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5298
BAA_5299	BAA_5299		BAA_5299	4773839	4774921	-	cytolysin immunity CylI domain protein		gene	gene5240	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5299
BAA_5300	BAA_5300		BAA_5300	4774934	4775641	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5241	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5300
BAA_5301	BAA_5301		BAA_5301	4775631	4775852	-	DNA-binding protein	identified by match to protein family HMM PF01381	gene	gene5242	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5301
BAA_5302	BAA_5302		BAA_5302	4776017	4776808	+	hypothetical protein	identified by glimmer%3B putative	gene	gene5243	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5302
BAA_5303	BAA_5303		BAA_5303	4776865	4777479	-	dedA protein	identified by match to protein family HMM PF09335	gene	gene5244	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5303
BAA_5304	BAA_5304		BAA_5304	4777883	4778326	+	hypothetical protein	identified by glimmer%3B putative	gene	gene5245	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5304
BAA_5305	BAA_5305		BAA_5305	4778357	4778818	+	conserved hypothetical protein	identified by match to protein family HMM PF03734	gene	gene5246	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5305
BAA_5306	BAA_5306		BAA_5306	4779183	4779848	+	DNA-binding response regulator	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486	gene	gene5247	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5306
BAA_5307	BAA_5307		BAA_5307	4779826	4781268	+	sensor histidine kinase	identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518	gene	gene5248	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5307
BAA_5308	BAA_5308		BAA_5308	4781408	4782310	+	putative membrane protein	identified by match to protein family HMM PF00892	gene	gene5249	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5308
BAA_5309	BAA_5309		BAA_5309	4782352	4783986	-	putative methionyl-tRNA synthetase	identified by match to protein family HMM PF09334%3B match to protein family HMM TIGR00398	gene	gene5250	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5309
BAA_5310	BAA_5310		BAA_5310	4784421	4785239	+	conserved hypothetical protein	identified by match to protein family HMM PF08241%3B match to protein family HMM PF08242	gene	gene5251	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5310
BAA_5311	BAA_5311		BAA_5311	4785653	4787344	+	methyl-accepting chemotaxis protein	identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672	gene	gene5252	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5311
BAA_5312	BAA_5312		BAA_5312	4787462	4787779	+	conserved hypothetical protein	identified by match to protein family HMM PF01883	gene	gene5253	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5312
BAA_5313	BAA_5313	nprB	nprB	4787827	4789470	-	neutral protease B	identified by match to protein family HMM PF01447%3B match to protein family HMM PF02868%3B match to protein family HMM PF03413%3B match to protein family HMM PF07504	gene	gene5254	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5313
BAA_5314	BAA_5314		BAA_5314	4789626	4790324	-	conserved hypothetical protein	identified by match to protein family HMM PF02678%3B match to protein family HMM PF07883	gene	gene5255	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5314
BAA_5315	BAA_5315		BAA_5315	4790376	4790786	-	transcriptional regulator%2C MarR family	identified by match to protein family HMM PF01047	gene	gene5256	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5315
BAA_5316	BAA_5316		BAA_5316	4790899	4791333	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5257	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5316
BAA_5317	BAA_5317		BAA_5317	4791497	4792696	-	sodium/hydrogen exchanger family protein	identified by match to protein family HMM PF00999	gene	gene5258	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5317
BAA_5318	BAA_5318		BAA_5318	4792684	4793193	-	trkA domain protein	identified by match to protein family HMM PF02080	gene	gene5259	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5318
BAA_5319	BAA_5319		BAA_5319	4793605	4795038	+	sodium/alanine symporter family protein	identified by match to protein family HMM PF01235%3B match to protein family HMM TIGR00835	gene	gene5260	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5319
BAA_5320	BAA_5320	dps2	dps2	4795251	4795691	+	DNA protection during starvation protein 2	identified by match to protein family HMM PF00210	gene	gene5261	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5320
BAA_5321	BAA_5321		BAA_5321	4796010	4796207	+	hypothetical protein	identified by glimmer%3B putative	gene	gene5262	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5321
BAA_5322	BAA_5322		BAA_5322	4796223	4796507	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5263	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5322
BAA_5323	BAA_5323		BAA_5323	4796473	4796595	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5264	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5323
BAA_5324	BAA_5324		BAA_5324	4796625	4797203	-	decarboxylase family protein	identified by match to protein family HMM PF03641%3B match to protein family HMM TIGR00730	gene	gene5265	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5324
BAA_5325	BAA_5325		BAA_5325	4797277	4797600	+	conserved hypothetical protein	identified by match to protein family HMM PF03819	gene	gene5266	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5325
BAA_5326	BAA_5326		BAA_5326	4797654	4798160	+	ferritin	identified by match to protein family HMM PF00210	gene	gene5267	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5326
BAA_5327	BAA_5327		BAA_5327	4798308	4798580	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5268	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5327
BAA_5328	BAA_5328		BAA_5328	4798679	4799476	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF04235	pseudogene	gene5269	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5328
BAA_5329	BAA_5329		BAA_5329	4799521	4800702	-	nucleoside transporter%2C NupC family	identified by match to protein family HMM PF01773%3B match to protein family HMM PF07662%3B match to protein family HMM PF07670	gene	gene5270	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5329
BAA_5330	BAA_5330		BAA_5330	4801048	4802229	-	nucleoside transporter%2C NupC family	identified by match to protein family HMM PF01773%3B match to protein family HMM PF07662%3B match to protein family HMM PF07670	gene	gene5271	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5330
BAA_5331	BAA_5331		BAA_5331	4802526	4803965	-	sodium/alanine symporter family protein	identified by match to protein family HMM PF01235%3B match to protein family HMM TIGR00835	gene	gene5272	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5331
BAA_5332	BAA_5332		BAA_5332	4804300	4805730	-	sodium/alanine symporter family protein	identified by match to protein family HMM PF01235%3B match to protein family HMM TIGR00835	gene	gene5273	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5332
BAA_5333	BAA_5333		BAA_5333	4806013	4806651	+	conserved hypothetical protein		gene	gene5274	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5333
BAA_5334	BAA_5334		BAA_5334	4806694	4808673	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5275	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5334
BAA_5335	BAA_5335		BAA_5335	4808724	4809473	-		wall-associated protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5276	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5335
BAA_5336	BAA_5336		BAA_5336	4809430	4811094	-		wall-associated protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5277	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5336
BAA_5337	BAA_5337		BAA_5337	4811406	4812218	-	conserved domain protein		gene	gene5278	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5337
BAA_5338	BAA_5338		BAA_5338	4812328	4813167	-	oxidoreductase%2C aldo/keto reductase family	identified by match to protein family HMM PF00248	gene	gene5279	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5338
BAA_5339	BAA_5339		BAA_5339	4813184	4814398	-	major facilitator family transporter	identified by match to protein family HMM PF00083%3B match to protein family HMM PF07690	gene	gene5280	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5339
BAA_5340	BAA_5340		BAA_5340	4814721	4815065	+	conserved hypothetical protein	identified by match to protein family HMM PF01638	gene	gene5281	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5340
BAA_5341	BAA_5341		BAA_5341	4815501	4815941	+	conserved hypothetical protein		gene	gene5282	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5341
BAA_5342	BAA_5342		BAA_5342	4815986	4817164	+	pyridine nucleotide-disulphide oxidoreductase	identified by match to protein family HMM PF00070%3B match to protein family HMM PF07992	gene	gene5283	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5342
BAA_5343	BAA_5343	tyrS2	tyrS2	4817474	4818733	-	tyrosine--tRNA ligase	identified by match to protein family HMM PF00579%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00234	gene	gene5284	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5343
BAA_5344	BAA_5344	murB2	murB2	4819098	4820015	-	UDP-N-acetylmuramate dehydrogenase	identified by match to protein family HMM PF01565%3B match to protein family HMM PF02873%3B match to protein family HMM TIGR00179	gene	gene5285	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5344
BAA_5345	BAA_5345		BAA_5345	4820404	4820799	-	SET domain protein		gene	gene5286	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5345
BAA_5346	BAA_5346		BAA_5346	4820966	4822468	-	methyl-accepting chemotaxis protein	identified by match to protein family HMM PF00015	gene	gene5287	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5346
BAA_5347	BAA_5347		BAA_5347	4822494	4823552	-	endonuclease/exonuclease/phosphatase family protein	identified by match to protein family HMM PF03372	gene	gene5288	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5347
BAA_5348	BAA_5348		BAA_5348	4823843	4824277	+	crcB protein	identified by match to protein family HMM PF02537%3B match to protein family HMM TIGR00494	gene	gene5289	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5348
BAA_5349	BAA_5349		BAA_5349	4824274	4824630	+	crcB protein	identified by match to protein family HMM PF02537	gene	gene5290	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5349
BAA_5350	BAA_5350		BAA_5350	4824658	4824897	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5291	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5350
BAA_5351	BAA_5351		BAA_5351	4824976	4825191	-	conserved domain protein		gene	gene5292	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5351
BAA_5352	BAA_5352	speG	speG	4825349	4825864	-	spermidine N1-acetyltransferase	identified by match to protein family HMM PF00583	gene	gene5293	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5352
BAA_5353	BAA_5353		BAA_5353	4826008	4826412	-	putative membrane protein	identified by match to protein family HMM PF06146	gene	gene5294	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5353
BAA_5354	BAA_5354		BAA_5354	4826462	4827424	-	conserved hypothetical protein	identified by match to protein family HMM PF08378	gene	gene5295	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5354
BAA_5355	BAA_5355		BAA_5355	4827860	4828825	+	putative lipoprotein		gene	gene5296	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5355
BAA_5356	BAA_5356		BAA_5356	4829050	4829802	-	iron compound ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene5297	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5356
BAA_5357	BAA_5357		BAA_5357	4829799	4830863	-	iron compound ABC transporter%2C permease protein	identified by match to protein family HMM PF01032	gene	gene5298	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5357
BAA_5358	BAA_5358		BAA_5358	4830860	4831876	-	iron compound ABC transporter%2C permease protein	identified by match to protein family HMM PF01032	gene	gene5299	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5358
BAA_5359	BAA_5359		BAA_5359	4831896	4832909	-	iron compound ABC transporter%2C iron compound-binding protein	identified by match to protein family HMM PF01497	gene	gene5300	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5359
BAA_5360	BAA_5360		BAA_5360	4833324	4834001	-	DNA-binding response regulator	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486	gene	gene5301	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5360
BAA_5362	BAA_5362	ssrA	ssrA	4834410	4834763	-			tmRNA	gene5302	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5362
BAA_5363	BAA_5363	smpB	smpB	4834890	4835357	-	SsrA-binding protein	identified by match to protein family HMM PF01668%3B match to protein family HMM TIGR00086	gene	gene5303	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5363
BAA_5364	BAA_5364		BAA_5364	4835412	4835525	+	hypothetical protein	identified by glimmer%3B putative	gene	gene5304	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5364
BAA_5365	BAA_5365	vacB	vacB	4835606	4838032	-	ribonuclease R	identified by match to protein family HMM PF00575%3B match to protein family HMM PF00773%3B match to protein family HMM PF08206%3B match to protein family HMM TIGR00358%3B match to protein family HMM TIGR02063	gene	gene5305	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5365
BAA_5366	BAA_5366	estA	estA	4838174	4838917	-	carboxylesterase		gene	gene5306	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5366
BAA_5367	BAA_5367	secG	secG	4839076	4839309	-	preprotein translocase%2C SecG subunit	identified by match to protein family HMM PF03840%3B match to protein family HMM TIGR00810	gene	gene5307	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5367
BAA_5368	BAA_5368		BAA_5368	4839404	4840096	-	conserved hypothetical protein	identified by match to protein family HMM PF04172	gene	gene5308	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5368
BAA_5369	BAA_5369		BAA_5369	4840093	4840467	-	LrgA family protein	identified by match to protein family HMM PF03788	gene	gene5309	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5369
BAA_5370	BAA_5370		BAA_5370	4840737	4841687	+	inosine-uridine preferring nucleoside hydrolase family protein	identified by match to protein family HMM PF01156	gene	gene5310	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5370
BAA_5371	BAA_5371		BAA_5371	4842175	4842687	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5311	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5371
BAA_5372	BAA_5372		BAA_5372	4842845	4843303	-	conserved domain protein		gene	gene5312	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5372
BAA_5373	BAA_5373		BAA_5373	4843614	4843748	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5313	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5373
BAA_5374	BAA_5374		BAA_5374	4843720	4844529	-	prophage LambdaBa03%2C HNH endonuclease family protein	identified by match to protein family HMM PF01844%3B match to protein family HMM PF07463	gene	gene5314	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5374
BAA_5375	BAA_5375		BAA_5375	4844704	4845333	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5315	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5375
BAA_5376	BAA_5376		BAA_5376	4845521	4845871	-	conserved hypothetical protein		gene	gene5316	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5376
BAA_5377	BAA_5377		BAA_5377	4846016	4846492	+	conserved domain protein		gene	gene5317	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5377
BAA_5378	BAA_5378		BAA_5378	4846558	4846671	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5318	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5378
BAA_5379	BAA_5379		BAA_5379	4846731	4846943	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5319	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5379
BAA_5380	BAA_5380		BAA_5380	4846949	4847080	-	conserved hypothetical protein		gene	gene5320	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5380
BAA_5381	BAA_5381		BAA_5381	4847191	4847436	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5321	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5381
BAA_5382	BAA_5382		BAA_5382	4847589	4847792	+	hypothetical protein	identified by glimmer%3B putative	gene	gene5322	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5382
BAA_5383	BAA_5383		BAA_5383	4847811	4848548	+	prophage LambdaBa03%2C transcriptional regulator domain protein		gene	gene5323	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5383
BAA_5384	BAA_5384		BAA_5384	4848959	4849150	+	hypothetical protein	identified by glimmer%3B putative	gene	gene5324	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5384
BAA_5385	BAA_5385		BAA_5385	4849247	4849834	+	hypothetical protein	identified by glimmer%3B putative	gene	gene5325	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5385
BAA_5386	BAA_5386		BAA_5386	4849827	4851398	+	putative prophage LambdaBa03%2C terminase%2C large subunit	identified by match to protein family HMM PF03354	gene	gene5326	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5386
BAA_5387	BAA_5387		BAA_5387	4851453	4851941	+	conserved domain protein	identified by match to protein family HMM PF01844	gene	gene5327	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5387
BAA_5388	BAA_5388		BAA_5388	4852358	4853668	+	conserved hypothetical protein	identified by match to protein family HMM PF04860%3B match to protein family HMM TIGR01537	gene	gene5328	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5388
BAA_5389	BAA_5389		BAA_5389	4853640	4854137	+	putative prophage LambdaBa03%2C prohead protease	identified by match to protein family HMM PF04586%3B match to protein family HMM TIGR01543	gene	gene5329	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5389
BAA_5390	BAA_5390		BAA_5390	4854197	4855237	+	phage major capsid protein%2C HK97 family	identified by match to protein family HMM PF05065%3B match to protein family HMM TIGR01554	gene	gene5330	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5390
BAA_5391	BAA_5391		BAA_5391	4855324	4856304	+	hypothetical protein	identified by glimmer%3B putative	gene	gene5331	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5391
BAA_5392	BAA_5392		BAA_5392	4856372	4857238	-	conserved domain protein		gene	gene5332	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5392
BAA_5393	BAA_5393		BAA_5393	4857361	4858266	-	prophage LambdaBa03%2C site-specific recombinase%2C phage integrase family	identified by match to protein family HMM PF00589%3B match to protein family HMM PF02899	gene	gene5333	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5393
BAA_5394	BAA_5394	eno	eno	4858410	4859705	-	phosphopyruvate hydratase	identified by match to protein family HMM PF00113%3B match to protein family HMM PF03952%3B match to protein family HMM TIGR01060	gene	gene5334	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5394
BAA_5395	BAA_5395	gpmI	gpmI	4859736	4861265	-	phosphoglycerate mutase%2C 2%2C3-bisphosphoglycerate-independent	identified by match to protein family HMM PF01676%3B match to protein family HMM PF06415%3B match to protein family HMM TIGR01307	gene	gene5335	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5395
BAA_5396	BAA_5396	tpi	tpi	4861262	4862017	-	triose-phosphate isomerase	identified by match to protein family HMM PF00121%3B match to protein family HMM TIGR00419	gene	gene5336	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5396
BAA_5397	BAA_5397	pgk	pgk	4862050	4863234	-	phosphoglycerate kinase	identified by match to protein family HMM PF00162	gene	gene5337	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5397
BAA_5398	BAA_5398	gap2	gap2	4863374	4864378	-	glyceraldehyde-3-phosphate dehydrogenase%2C type I	identified by match to protein family HMM PF00044%3B match to protein family HMM PF02800%3B match to protein family HMM TIGR01534	gene	gene5338	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5398
BAA_5399	BAA_5399	cggR	cggR	4864405	4865433	-	gapA transcriptional regulator CggR	identified by match to protein family HMM PF04198	gene	gene5339	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5399
BAA_5400	BAA_5400		BAA_5400	4865570	4865815	-	glutaredoxin family protein	identified by match to protein family HMM PF00462%3B match to protein family HMM PF05768	gene	gene5340	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5400
BAA_5401	BAA_5401	sigL	sigL	4865825	4867132	-	RNA polymerase sigma-54 factor	identified by match to protein family HMM PF00309%3B match to protein family HMM PF04552%3B match to protein family HMM PF04963%3B match to protein family HMM TIGR02395	gene	gene5341	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5401
BAA_5402	BAA_5402		BAA_5402	4867387	4867467	-	tRNA-Arg		tRNA	gene5342	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5402
BAA_5403	BAA_5403		BAA_5403	4867672	4867878	+	conserved hypothetical protein	identified by match to protein family HMM PF07870	gene	gene5343	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5403
BAA_5404	BAA_5404		BAA_5404	4867915	4868457	+	putative lipoprotein		gene	gene5344	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5404
BAA_5405	BAA_5405	spoVAC_2	spoVAC_2	4868488	4868964	+	stage V sporulation protein AC	identified by match to protein family HMM PF03862%3B match to protein family HMM TIGR02838	gene	gene5345	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5405
BAA_5406	BAA_5406	spoVAD_2	spoVAD_2	4868965	4869981	+	stage V sporulation protein AD	identified by match to protein family HMM PF07451%3B match to protein family HMM TIGR02845	gene	gene5346	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5406
BAA_5407	BAA_5407	spoVAE_2	spoVAE_2	4869978	4870328	+	stage V sporulation protein AE	identified by match to protein family HMM PF03862%3B match to protein family HMM TIGR02839	gene	gene5347	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5407
BAA_5408	BAA_5408		BAA_5408	4870340	4870546	+	conserved hypothetical protein	identified by match to protein family HMM PF07870	gene	gene5348	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5408
BAA_5409	BAA_5409		BAA_5409	4870567	4871436	+	conserved hypothetical protein	identified by match to protein family HMM PF04239%3B match to protein family HMM PF07870	gene	gene5349	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5409
BAA_5410	BAA_5410	clpP2	clpP2	4871678	4872259	+	ATP-dependent Clp protease%2C proteolytic subunit ClpP	identified by match to protein family HMM PF00574%3B match to protein family HMM TIGR00493	gene	gene5350	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5410
BAA_5411	BAA_5411	ptsH2	ptsH2	4872583	4872831	-	phosphocarrier protein HPr	identified by match to protein family HMM PF00381%3B match to protein family HMM TIGR01003	gene	gene5351	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5411
BAA_5412	BAA_5412		BAA_5412	4872855	4873805	-	conserved hypothetical protein	identified by match to protein family HMM PF02650%3B match to protein family HMM TIGR00647	gene	gene5352	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5412
BAA_5413	BAA_5413		BAA_5413	4873895	4874848	-	conserved hypothetical protein	identified by match to protein family HMM PF01933%3B match to protein family HMM TIGR01826	gene	gene5353	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5413
BAA_5414	BAA_5414		BAA_5414	4874852	4875733	-	conserved hypothetical protein	identified by match to protein family HMM PF03668	gene	gene5354	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5414
BAA_5415	BAA_5415		BAA_5415	4875754	4876212	-	MutT/NUDIX family protein	identified by match to protein family HMM PF00293	gene	gene5355	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5415
BAA_5416	BAA_5416		BAA_5416	4876441	4877247	-	conserved hypothetical protein	identified by match to protein family HMM PF04018	gene	gene5356	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5416
BAA_5417	BAA_5417	trxB	trxB	4877410	4878366	-	thioredoxin-disulfide reductase	identified by match to protein family HMM PF00070%3B match to protein family HMM PF01134%3B match to protein family HMM PF03486%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR01292	gene	gene5357	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5417
BAA_5418	BAA_5418		BAA_5418	4878451	4879962	-	TPR domain protein	identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719	gene	gene5358	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5418
BAA_5419	BAA_5419		BAA_5419	4880102	4880614	-	bacterial transferase hexapeptide domain protein	identified by match to protein family HMM PF00132	gene	gene5359	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5419
BAA_5420	BAA_5420		BAA_5420	4880638	4881288	-	hydrolase%2C haloacid dehalogenase-like family	identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01509%3B match to protein family HMM TIGR01549	gene	gene5360	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5420
BAA_5421	BAA_5421	lgt	lgt	4881356	4882168	-	prolipoprotein diacylglyceryl transferase	identified by match to protein family HMM PF01790%3B match to protein family HMM TIGR00544	gene	gene5361	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5421
BAA_5422	BAA_5422	hprK	hprK	4882193	4883122	-	HPr(Ser) kinase/phosphatase	identified by match to protein family HMM PF02603%3B match to protein family HMM PF07475%3B match to protein family HMM TIGR00679	gene	gene5362	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5422
BAA_5423	BAA_5423		BAA_5423	4883279	4883659	-	putative membrane protein	identified by match to protein family HMM PF04020	gene	gene5363	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5423
BAA_5424	BAA_5424		BAA_5424	4883774	4884223	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5364	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5424
BAA_5425	BAA_5425	uvrA	uvrA	4884283	4887159	-	excinuclease ABC%2C A subunit	identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR00630	gene	gene5365	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5425
BAA_5426	BAA_5426	uvrB	uvrB	4887165	4889141	-	excinuclease ABC%2C B subunit	identified by match to protein family HMM PF00271%3B match to protein family HMM PF02151%3B match to protein family HMM PF04851%3B match to protein family HMM TIGR00631	gene	gene5366	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5426
BAA_5427	BAA_5427		BAA_5427	4889302	4890459	-	transposase%2C IS605 family	identified by match to protein family HMM PF01385%3B match to protein family HMM PF07282%3B match to protein family HMM TIGR01766	gene	gene5367	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5427
BAA_5428	BAA_5428		BAA_5428	4890877	4891260	-	putative lipoprotein		gene	gene5368	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5428
BAA_5429	BAA_5429		BAA_5429	4891354	4891974	-	conserved hypothetical protein		gene	gene5369	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5429
BAA_5430	BAA_5430		BAA_5430	4891971	4892732	-	transcriptional regulator%2C MerR family	identified by match to protein family HMM PF00376	gene	gene5370	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5430
BAA_5431	BAA_5431		BAA_5431	4892832	4892963	-		conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene5371	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5431
BAA_5432	BAA_5432		BAA_5432	4893076	4893468	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5372	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5432
BAA_5433	BAA_5433		BAA_5433	4893465	4893686	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5373	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5433
BAA_5434	BAA_5434		BAA_5434	4893699	4893896	-	DNA-binding protein	identified by match to protein family HMM PF01381	gene	gene5374	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5434
BAA_5435	BAA_5435		BAA_5435	4894231	4895253	-	putative membrane protein	identified by match to protein family HMM PF03601	gene	gene5375	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5435
BAA_5436	BAA_5436		BAA_5436	4895404	4896297	+	transcriptional regulator%2C LysR family	identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466	gene	gene5376	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5436
BAA_5437	BAA_5437		BAA_5437	4896349	4896714	+	transcriptional regulator%2C MerR family	identified by match to protein family HMM PF00376	gene	gene5377	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5437
BAA_5438	BAA_5438		BAA_5438	4896719	4897264	+	FMN reductase%2C NADPH-dependent	identified by match to protein family HMM PF02525%3B match to protein family HMM PF03358	gene	gene5378	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5438
BAA_5439	BAA_5439		BAA_5439	4897530	4899164	+	putative macrolide efflux pump	identified by match to protein family HMM PF00005	gene	gene5379	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5439
BAA_5440	BAA_5440		BAA_5440	4899323	4899580	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01906	pseudogene	gene5380	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5440
BAA_5441	BAA_5441		BAA_5441	4899645	4901360	-	ABC transporter%2C permease/ATP-binding protein	identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664	gene	gene5381	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5441
BAA_5442	BAA_5442		BAA_5442	4901672	4902856	-	putative membrane protein		gene	gene5382	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5442
BAA_5443	BAA_5443		BAA_5443	4902966	4904402	-	carboxyl-terminal protease	identified by match to protein family HMM PF00595%3B match to protein family HMM PF01471%3B match to protein family HMM PF03572%3B match to protein family HMM TIGR00225	gene	gene5383	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5443
BAA_5444	BAA_5444	ftsX	ftsX	4904521	4905414	-	cell division ABC transporter%2C permease protein FtsX	identified by match to protein family HMM PF02687	gene	gene5384	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5444
BAA_5445	BAA_5445	ftsE	ftsE	4905404	4906090	-	cell division ABC transporter%2C ATP-binding protein FtsE	identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR02673	gene	gene5385	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5445
BAA_5446	BAA_5446	cccB	cccB	4906377	4906700	-	cytochrome c-551		gene	gene5386	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5446
BAA_5447	BAA_5447		BAA_5447	4906955	4907113	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5387	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5447
BAA_5449	BAA_5449	prfB	prfB	4907137	4908280	-	peptide chain release factor 2%2C programmed	identified by match to protein family HMM PF00472%3B match to protein family HMM PF03462%3B match to protein family HMM TIGR00020	gene	gene5388	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5449
BAA_5450	BAA_5450	secA2	secA2	4908380	4910887	-	preprotein translocase%2C SecA subunit	identified by match to protein family HMM PF00271%3B match to protein family HMM PF01043%3B match to protein family HMM PF02810%3B match to protein family HMM PF07516%3B match to protein family HMM PF07517%3B match to protein family HMM TIGR00963	gene	gene5389	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5450
BAA_5451	BAA_5451	yfiA	yfiA	4911164	4911706	-	ribosomal subunit interface protein	identified by match to protein family HMM PF02482%3B match to protein family HMM TIGR00741	gene	gene5390	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5451
BAA_5452	BAA_5452		BAA_5452	4911731	4911865	+	conserved hypothetical protein		gene	gene5391	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5452
BAA_5453	BAA_5453	cspC	cspC	4912030	4912233	-	cold shock protein CspC	identified by match to protein family HMM PF00313	gene	gene5392	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5453
BAA_5454	BAA_5454	comFC	comFC	4912354	4913058	-	comF operon protein 3		gene	gene5393	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5454
BAA_5455	BAA_5455	comFA	comFA	4913058	4914407	-	comF operon protein 1	identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF04851	gene	gene5394	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5455
BAA_5456	BAA_5456		BAA_5456	4914535	4915845	-	putative cell wall endopeptidase%2C NlpC/P60 family	identified by match to protein family HMM PF00877	gene	gene5395	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5456
BAA_5457	BAA_5457		BAA_5457	4916097	4916411	-	conserved hypothetical protein	identified by match to protein family HMM PF01638	gene	gene5396	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5457
BAA_5458	BAA_5458		BAA_5458	4916585	4917427	-	degV family protein	identified by match to protein family HMM PF02645%3B match to protein family HMM TIGR00762	gene	gene5397	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5458
BAA_5459	BAA_5459		BAA_5459	4917667	4918302	+	conserved hypothetical protein TIGR00257	identified by match to protein family HMM PF01205%3B match to protein family HMM PF09186%3B match to protein family HMM TIGR00257	gene	gene5398	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5459
BAA_5460	BAA_5460		BAA_5460	4918377	4919504	+	transcription antiterminator%2C LytR family	identified by match to protein family HMM PF03816%3B match to protein family HMM TIGR00350	gene	gene5399	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5460
BAA_5461	BAA_5461		BAA_5461	4919538	4920653	-	UDP-N-acetylglucosamine 2-epimerase	identified by match to protein family HMM PF02350%3B match to protein family HMM TIGR00236	gene	gene5400	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5461
BAA_5462	BAA_5462	ugd	ugd	4920728	4922098	-	UDP-glucose 6-dehydrogenase	identified by match to protein family HMM PF00984%3B match to protein family HMM PF01210%3B match to protein family HMM PF02558%3B match to protein family HMM PF03720%3B match to protein family HMM PF03721%3B match to protein family HMM TIGR03026	gene	gene5401	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5462
BAA_5463	BAA_5463		BAA_5463	4922588	4923661	+	glycosyl transferase%2C group 4 family protein	identified by match to protein family HMM PF00953	gene	gene5402	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5463
BAA_5464	BAA_5464		BAA_5464	4923862	4924599	+	putative polysaccharide deacetylase	identified by match to protein family HMM PF01522	gene	gene5403	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5464
BAA_5465	BAA_5465		BAA_5465	4924704	4927379	+	transcription antiterminator%2C BglG family	identified by match to protein family HMM PF00158%3B match to protein family HMM PF00874%3B match to protein family HMM PF03610%3B match to protein family HMM PF07728	gene	gene5404	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5465
BAA_5466	BAA_5466		BAA_5466	4927597	4928010	-	conserved hypothetical protein	identified by match to protein family HMM PF07452	gene	gene5405	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5466
BAA_5467	BAA_5467		BAA_5467	4928200	4929381	+	chromate ion transporter	identified by match to protein family HMM PF02417%3B match to protein family HMM TIGR00937	gene	gene5406	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5467
BAA_5468	BAA_5468		BAA_5468	4929420	4930124	-	conserved hypothetical protein	identified by match to protein family HMM PF04794	gene	gene5407	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5468
BAA_5469	BAA_5469	celF	celF	4930174	4931499	-	6-phospho-beta-glucosidase	identified by match to protein family HMM PF02056	gene	gene5408	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5469
BAA_5470	BAA_5470	celC2	celC2	4931503	4931826	-	PTS system%2C cellobiose-specific IIA component	identified by match to protein family HMM PF02255	gene	gene5409	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5470
BAA_5471	BAA_5471	celB2	celB2	4932010	4933317	-	PTS system%2C cellobiose-specific IIC component	identified by match to protein family HMM PF02378%3B match to protein family HMM TIGR00359%3B match to protein family HMM TIGR00410	gene	gene5410	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5471
BAA_5472	BAA_5472	celA2	celA2	4933334	4933636	-	PTS system%2C cellobiose-specific IIB component	identified by match to protein family HMM PF02302	gene	gene5411	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5472
BAA_5473	BAA_5473		BAA_5473	4934020	4935102	+	spermine/spermidine synthase family protein	identified by match to protein family HMM PF01564	gene	gene5412	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5473
BAA_5474	BAA_5474	speD2	speD2	4935130	4935501	+	adenosylmethionine decarboxylase 2	identified by match to protein family HMM PF02675%3B match to protein family HMM TIGR03330	gene	gene5413	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5474
BAA_5475	BAA_5475	celC3	celC3	4935612	4935929	-	PTS system%2C cellobiose-specific IIA component	identified by match to protein family HMM PF02255	gene	gene5414	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5475
BAA_5476	BAA_5476	celB3	celB3	4935939	4937240	-	PTS system%2C cellobiose-specific IIC component	identified by match to protein family HMM PF02378%3B match to protein family HMM TIGR00359%3B match to protein family HMM TIGR00410	gene	gene5415	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5476
BAA_5477	BAA_5477	celA3	celA3	4937255	4937557	-	PTS system%2C cellobiose-specific IIB component	identified by match to protein family HMM PF02302%3B match to protein family HMM TIGR00853	gene	gene5416	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5477
BAA_5478	BAA_5478		BAA_5478	4937782	4938999	+	putative proton/glutamate symporter family protein	identified by match to protein family HMM PF00375	gene	gene5417	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5478
BAA_5479	BAA_5479		BAA_5479	4939148	4940305	+	putative membrane protein		gene	gene5418	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5479
BAA_5480	BAA_5480		BAA_5480	4940348	4940728	+	conserved hypothetical protein	identified by match to protein family HMM PF00903	gene	gene5419	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5480
BAA_5481	BAA_5481		BAA_5481	4940769	4942769	-	conserved hypothetical protein	identified by match to protein family HMM TIGR03061%3B match to protein family HMM TIGR03062	gene	gene5420	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5481
BAA_5482	BAA_5482		BAA_5482	4942905	4943789	+	transcriptional regulator%2C LysR family	identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466	gene	gene5421	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5482
BAA_5483	BAA_5483		BAA_5483	4943837	4944922	-	conserved hypothetical protein		gene	gene5422	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5483
BAA_5484	BAA_5484		BAA_5484	4945171	4945320	-		transposase%2C IS605 family%2C OrfB%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene5423	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5484
BAA_5485	BAA_5485		BAA_5485	4945390	4946322	-		transposase%2C is605 family%2C orfb%3B this region contains one or more premature stops and/or frameshifts%3B identified by match to protein family HMM TIGR01766	pseudogene	gene5424	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5485
BAA_5486	BAA_5486		BAA_5486	4946379	4946717	-		transposase%2C IS605 family%2C OrfA%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM TIGR01765	pseudogene	gene5425	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5486
BAA_5487	BAA_5487		BAA_5487	4946913	4947062	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5426	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5487
BAA_5488	BAA_5488	cydA3	cydA3	4947316	4948671	+	cytochrome d ubiquinol oxidase%2C subunit I	identified by match to protein family HMM PF01654	gene	gene5427	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5488
BAA_5489	BAA_5489		BAA_5489	4948664	4949689	+	putative cytochrome d ubiquinol oxidase%2C subunit II		gene	gene5428	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5489
BAA_5490	BAA_5490		BAA_5490	4950080	4951438	+	putative arsenical pump family protein	identified by match to protein family HMM PF02040%3B match to protein family HMM PF03600	gene	gene5429	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5490
BAA_5491	BAA_5491	thiC	thiC	4951540	4953300	-	thiamine biosynthesis protein ThiC	identified by match to protein family HMM PF01964%3B match to protein family HMM TIGR00190	gene	gene5430	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5491
BAA_5493	BAA_5493	lldP2	lldP2	4953600	4955258	-	L-lactate permease	identified by match to protein family HMM PF02652%3B match to protein family HMM TIGR00795	gene	gene5431	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5493
BAA_5494	BAA_5494		BAA_5494	4955556	4955873	+	conserved hypothetical protein		gene	gene5432	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5494
BAA_5495	BAA_5495		BAA_5495	4955937	4956428	-	conserved hypothetical protein		gene	gene5433	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5495
BAA_5496	BAA_5496		BAA_5496	4956479	4956844	-	conserved hypothetical protein	identified by match to protein family HMM PF06803	gene	gene5434	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5496
BAA_5497	BAA_5497		BAA_5497	4957391	4959319	+	arylsulfatase	identified by match to protein family HMM PF00884	gene	gene5435	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5497
BAA_5498	BAA_5498	dat2	dat2	4959842	4960714	+	D-amino-acid transaminase	identified by match to protein family HMM PF01063%3B match to protein family HMM TIGR01121	gene	gene5436	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5498
BAA_5499	BAA_5499		BAA_5499	4960925	4961086	+		putative cell wall hydrolase%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5437	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5499
BAA_5500	BAA_5500		BAA_5500	4961163	4961381	+		N-acetylmuramoyl-L-alanine amidase%2C N-terminus%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5438	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5500
BAA_5501	BAA_5501		BAA_5501	4961648	4962673	+	NlpC/P60 family protein	identified by match to protein family HMM PF00877%3B match to protein family HMM PF06347%3B match to protein family HMM PF08239	gene	gene5439	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5501
BAA_5502	BAA_5502		BAA_5502	4963019	4964230	+	nucleoside transporter%2C NupC family	identified by match to protein family HMM PF01773%3B match to protein family HMM PF07662%3B match to protein family HMM PF07670%3B match to protein family HMM TIGR00804	gene	gene5440	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5502
BAA_5503	BAA_5503		BAA_5503	4964712	4965242	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5441	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5503
BAA_5504	BAA_5504		BAA_5504	4965239	4965895	+		glycosyl transferase%2C group 2 family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00535	pseudogene	gene5442	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5504
BAA_5505	BAA_5505		BAA_5505	4966023	4966433	+		N-acetylglucosaminyltransferase%2C C-terminus%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5443	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5505
BAA_5506	BAA_5506		BAA_5506	4966577	4966711	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5444	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5506
BAA_5507	BAA_5507	opuD2	opuD2	4966952	4968469	-	glycine betaine transporter	identified by match to protein family HMM PF02028%3B match to protein family HMM TIGR00842	gene	gene5445	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5507
BAA_5508	BAA_5508		BAA_5508	4969135	4970007	+	conserved domain protein	identified by match to protein family HMM PF06347%3B match to protein family HMM PF06725%3B match to protein family HMM PF08239	gene	gene5446	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5508
BAA_5509	BAA_5509		BAA_5509	4970087	4970389	+	hypothetical protein	identified by glimmer%3B putative	gene	gene5447	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5509
BAA_5510	BAA_5510		BAA_5510	4970480	4971859	-	conserved hypothetical protein		gene	gene5448	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5510
BAA_5511	BAA_5511		BAA_5511	4971873	4973426	-	putative membrane protein		gene	gene5449	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5511
BAA_5512	BAA_5512		BAA_5512	4973432	4973920	-	conserved domain protein		gene	gene5450	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5512
BAA_5513	BAA_5513		BAA_5513	4974078	4975697	+	conserved hypothetical protein	identified by match to protein family HMM PF04434	gene	gene5451	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5513
BAA_5514	BAA_5514		BAA_5514	4975681	4978437	+	putative helicase	identified by match to protein family HMM PF00176%3B match to protein family HMM PF00271	gene	gene5452	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5514
BAA_5515	BAA_5515		BAA_5515	4978615	4979100	-	conserved domain protein		gene	gene5453	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5515
BAA_5516	BAA_5516		BAA_5516	4979211	4979435	+	conserved hypothetical protein	identified by match to protein family HMM PF07872	gene	gene5454	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5516
BAA_5517	BAA_5517		BAA_5517	4979491	4979706	+	hypothetical protein	identified by glimmer%3B putative	gene	gene5455	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5517
BAA_5518	BAA_5518		BAA_5518	4979726	4980124	-	conserved hypothetical protein		gene	gene5456	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5518
BAA_5519	BAA_5519	comK	comK	4980319	4980825	+	competence transcription factor ComK	identified by match to protein family HMM PF06338	gene	gene5457	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5519
BAA_5520	BAA_5520		BAA_5520	4980881	4981351	-	putative sigma factor	identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM TIGR02937	gene	gene5458	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5520
BAA_5521	BAA_5521		BAA_5521	4981570	4982271	-	conserved hypothetical protein		gene	gene5459	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5521
BAA_5522	BAA_5522		BAA_5522	4982385	4983593	-	ABC transporter%2C permease protein	identified by match to protein family HMM PF02687	gene	gene5460	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5522
BAA_5523	BAA_5523		BAA_5523	4983581	4984261	-	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene5461	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5523
BAA_5524	BAA_5524		BAA_5524	4984258	4985451	-	efflux transporter%2C RND family%2C MFP subunit	identified by match to protein family HMM TIGR01730	gene	gene5462	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5524
BAA_5525	BAA_5525		BAA_5525	4985817	4986008	+	DNA-binding protein	identified by match to protein family HMM PF01381	gene	gene5463	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5525
BAA_5526	BAA_5526		BAA_5526	4986009	4986521	+	putative membrane protein		gene	gene5464	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5526
BAA_5527	BAA_5527		BAA_5527	4986626	4987960	-	phosphoglycerate transporter family protein	identified by match to protein family HMM PF07690%3B match to protein family HMM TIGR00881	gene	gene5465	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5527
BAA_5528	BAA_5528		BAA_5528	4987980	4989014	-	putative lipoprotein		gene	gene5466	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5528
BAA_5529	BAA_5529		BAA_5529	4989011	4989793	-	conserved hypothetical protein		gene	gene5467	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5529
BAA_5530	BAA_5530		BAA_5530	4989860	4991290	-	sensor histidine kinase	identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518	gene	gene5468	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5530
BAA_5531	BAA_5531		BAA_5531	4991302	4991973	-	DNA-binding response regulator	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486	gene	gene5469	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5531
BAA_5532	BAA_5532	galE1	galE1	4992101	4993093	-	UDP-glucose 4-epimerase	identified by match to protein family HMM PF00106%3B match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF04321%3B match to protein family HMM PF07993%3B match to protein family HMM TIGR01179	gene	gene5470	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5532
BAA_5533	BAA_5533	lytR	lytR	4993271	4994182	-	transcription antiterminator LytR	identified by match to protein family HMM PF03816%3B match to protein family HMM TIGR00350	gene	gene5471	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5533
BAA_5534	BAA_5534	fabZ	fabZ	4995130	4995564	-	(3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase	identified by match to protein family HMM PF07977%3B match to protein family HMM TIGR01750	gene	gene5472	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5534
BAA_5535	BAA_5535		BAA_5535	4995878	4996018	-	conserved hypothetical protein		gene	gene5473	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5535
BAA_5536	BAA_5536		BAA_5536	4996202	4997317	+	UDP-N-acetylglucosamine 2-epimerase	identified by match to protein family HMM PF02350%3B match to protein family HMM TIGR00236	gene	gene5474	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5536
BAA_5537	BAA_5537		BAA_5537	4997356	4999005	-	techoic acid ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005%3B match to protein family HMM PF08239	gene	gene5475	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5537
BAA_5538	BAA_5538		BAA_5538	4999021	4999827	-	putative techoic acid ABC transporter%2C efflux permease	identified by match to protein family HMM PF01061	gene	gene5476	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5538
BAA_5539	BAA_5539		BAA_5539	4999824	5001107	-	UDP-glucose/GDP-mannose dehydrogenase family protein	identified by match to protein family HMM PF00984%3B match to protein family HMM PF03720%3B match to protein family HMM PF03721%3B match to protein family HMM TIGR03026	gene	gene5477	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5539
BAA_5540	BAA_5540		BAA_5540	5001182	5003872	-	conserved domain protein	identified by match to protein family HMM PF07495%3B match to protein family HMM PF07940	gene	gene5478	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5540
BAA_5541	BAA_5541		BAA_5541	5004026	5005678	-	glycosyl transferase%2C group 1 family	identified by match to protein family HMM PF00534	gene	gene5479	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5541
BAA_5542	BAA_5542		BAA_5542	5005780	5006169	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5480	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5542
BAA_5543	BAA_5543		BAA_5543	5006219	5008786	-	conserved domain protein		gene	gene5481	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5543
BAA_5544	BAA_5544		BAA_5544	5008783	5009046	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5482	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5544
BAA_5545	BAA_5545		BAA_5545	5009299	5010597	-	glycosyl transferase%2C group 1 family	identified by match to protein family HMM PF00534	gene	gene5483	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5545
BAA_5546	BAA_5546		BAA_5546	5010548	5011789	-	glycosyl transferase%2C group 1 family	identified by match to protein family HMM PF00534	gene	gene5484	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5546
BAA_5547	BAA_5547	mbl	mbl	5012083	5013084	-	mbl protein	identified by match to protein family HMM PF02491%3B match to protein family HMM PF06723%3B match to protein family HMM TIGR00904	gene	gene5485	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5547
BAA_5548	BAA_5548	spoIIID	spoIIID	5013246	5013644	-	stage III sporulation protein D	identified by match to protein family HMM TIGR02844	gene	gene5486	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5548
BAA_5549	BAA_5549		BAA_5549	5013923	5014303	-	putative lipoprotein	identified by match to protein family HMM PF07495	gene	gene5487	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5549
BAA_5550	BAA_5550		BAA_5550	5014459	5014593	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5488	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5550
BAA_5551	BAA_5551		BAA_5551	5014735	5015640	-	stage II sporulation protein	identified by match to protein family HMM PF01551	gene	gene5489	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5551
BAA_5552	BAA_5552		BAA_5552	5015802	5016506	-	putative ABC transporter%2C permease protein	identified by match to protein family HMM PF01061	gene	gene5490	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5552
BAA_5553	BAA_5553		BAA_5553	5016506	5017348	-	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene5491	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5553
BAA_5554	BAA_5554		BAA_5554	5017530	5017943	-		ABC transporter%2C ATP-binding protein%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF04397	pseudogene	gene5492	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5554
BAA_5555	BAA_5555		BAA_5555	5018028	5018537	-		ABC transporter ATP-binding protein%2C N-terminus%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene5493	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5555
BAA_5556	BAA_5556	spoIID	spoIID	5018665	5019684	-	stage II sporulation protein D	identified by match to protein family HMM PF08486%3B match to protein family HMM TIGR02669%3B match to protein family HMM TIGR02870	gene	gene5494	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5556
BAA_5557	BAA_5557	murA1	murA1	5019892	5021196	-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1	identified by match to protein family HMM PF00275%3B match to protein family HMM TIGR01072	gene	gene5495	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5557
BAA_5558	BAA_5558		BAA_5558	5021236	5021940	-	conserved hypothetical protein	identified by match to protein family HMM PF08680	gene	gene5496	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5558
BAA_5559	BAA_5559		BAA_5559	5021992	5022228	-	conserved hypothetical protein	identified by match to protein family HMM PF06612%3B match to protein family HMM TIGR02327	gene	gene5497	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5559
BAA_5560	BAA_5560	nuoN	nuoN	5022594	5024114	-	NADH dehydrogenase (ubiquinone)%2C N subunit	identified by match to protein family HMM PF00361%3B match to protein family HMM TIGR01770	gene	gene5498	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5560
BAA_5561	BAA_5561	nuoM	nuoM	5024116	5025609	-	NADH dehydrogenase (ubiquinone)%2C M subunit	identified by match to protein family HMM PF00361%3B match to protein family HMM TIGR01972	gene	gene5499	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5561
BAA_5562	BAA_5562	nuoL	nuoL	5025606	5027468	-	NADH dehydrogenase (ubiquinone)%2C L subunit	identified by match to protein family HMM PF00361%3B match to protein family HMM PF00662%3B match to protein family HMM TIGR01974	gene	gene5500	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5562
BAA_5563	BAA_5563	nuoK	nuoK	5027498	5027812	-	NADH dehydrogenase (ubiquinone)%2C K subunit	identified by match to protein family HMM PF00420	gene	gene5501	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5563
BAA_5564	BAA_5564	nuoJ	nuoJ	5027805	5028329	-	NADH dehydrogenase (ubiquinone)%2C J subunit	identified by match to protein family HMM PF00499	gene	gene5502	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5564
BAA_5565	BAA_5565	nuoI	nuoI	5028326	5028745	-	NADH dehydrogenase (ubiquinone)%2C I subunit	identified by match to protein family HMM PF00037%3B match to protein family HMM TIGR01971	gene	gene5503	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5565
BAA_5566	BAA_5566	nuoH	nuoH	5028771	5029772	-	NADH dehydrogenase (ubiquinone)%2C H subunit	identified by match to protein family HMM PF00146	gene	gene5504	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5566
BAA_5567	BAA_5567	nuoD	nuoD	5029772	5030872	-	NADH dehydrogenase (ubiquinone)%2C D subunit	identified by match to protein family HMM PF00346%3B match to protein family HMM TIGR01962	gene	gene5505	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5567
BAA_5568	BAA_5568		BAA_5568	5030877	5031830	-	putative NADH dehydrogenase (ubiquinone)%2C C subunit	identified by match to protein family HMM PF00329%3B match to protein family HMM TIGR01961	gene	gene5506	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5568
BAA_5569	BAA_5569	nuoB	nuoB	5031827	5032345	-	NADH dehydrogenase (ubiquinone)%2C B subunit	identified by match to protein family HMM PF01058%3B match to protein family HMM TIGR01957	gene	gene5507	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5569
BAA_5570	BAA_5570	nuoA	nuoA	5032336	5032704	-	NADH dehydrogenase (ubiquinone)%2C A subunit	identified by match to protein family HMM PF00507	gene	gene5508	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5570
BAA_5571	BAA_5571		BAA_5571	5032995	5035724	+	sensory box/GGDEF family protein	identified by match to protein family HMM PF00563%3B match to protein family HMM PF00989%3B match to protein family HMM PF00990%3B match to protein family HMM PF08447%3B match to protein family HMM PF08448%3B match to protein family HMM TIGR00229%3B match to protein family HMM TIGR00254	gene	gene5509	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5571
BAA_5572	BAA_5572		BAA_5572	5035796	5036449	-	conserved hypothetical protein	identified by match to protein family HMM PF06161	gene	gene5510	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5572
BAA_5573	BAA_5573		BAA_5573	5036497	5037288	-	conserved hypothetical protein	identified by match to protein family HMM PF06161	gene	gene5511	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5573
BAA_5574	BAA_5574	atpC	atpC	5037410	5037811	-	ATP synthase F1%2C epsilon subunit	identified by match to protein family HMM PF00401%3B match to protein family HMM PF02823%3B match to protein family HMM TIGR01216	gene	gene5512	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5574
BAA_5575	BAA_5575	atpD	atpD	5037832	5039241	-	ATP synthase F1%2C beta subunit	identified by match to protein family HMM PF00006%3B match to protein family HMM PF00306%3B match to protein family HMM PF02874%3B match to protein family HMM TIGR01039	gene	gene5513	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5575
BAA_5576	BAA_5576	atpG	atpG	5039361	5040221	-	ATP synthase F1%2C gamma subunit	identified by match to protein family HMM PF00231%3B match to protein family HMM TIGR01146	gene	gene5514	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5576
BAA_5577	BAA_5577	atpA	atpA	5040557	5042065	-	ATP synthase F1%2C alpha subunit	identified by match to protein family HMM PF00006%3B match to protein family HMM PF00306%3B match to protein family HMM PF02874%3B match to protein family HMM PF09378%3B match to protein family HMM TIGR00962	gene	gene5515	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5577
BAA_5578	BAA_5578	atpH	atpH	5042077	5042619	-	ATP synthase F1%2C delta subunit	identified by match to protein family HMM PF00213%3B match to protein family HMM TIGR01145	gene	gene5516	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5578
BAA_5579	BAA_5579	atpF	atpF	5042616	5043122	-	ATP synthase F0%2C B subunit	identified by match to protein family HMM PF00430%3B match to protein family HMM TIGR01144	gene	gene5517	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5579
BAA_5580	BAA_5580	atpE	atpE	5043250	5043468	-	ATP synthase F0%2C C subunit	identified by match to protein family HMM PF00137%3B match to protein family HMM TIGR01260	gene	gene5518	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5580
BAA_5581	BAA_5581	atpB	atpB	5043525	5044244	-	ATP synthase F0%2C A subunit	identified by match to protein family HMM PF00119%3B match to protein family HMM TIGR01131	gene	gene5519	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5581
BAA_5582	BAA_5582	atpI	atpI	5044252	5044644	-	ATP synthase protein I	identified by match to protein family HMM PF05468	gene	gene5520	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5582
BAA_5583	BAA_5583		BAA_5583	5044644	5044868	-	conserved hypothetical protein		gene	gene5521	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5583
BAA_5584	BAA_5584		BAA_5584	5044895	5045008	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5522	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5584
BAA_5585	BAA_5585	upp	upp	5045380	5046009	-	uracil phosphoribosyltransferase	identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01091	gene	gene5523	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5585
BAA_5586	BAA_5586	glyA	glyA	5046281	5047522	-	glycine hydroxymethyltransferase	identified by match to protein family HMM PF00155%3B match to protein family HMM PF00464%3B match to protein family HMM PF01212	gene	gene5524	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5586
BAA_5587	BAA_5587		BAA_5587	5047739	5048329	-	putative lipoprotein	identified by match to protein family HMM PF04260%3B match to protein family HMM TIGR01440	gene	gene5525	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5587
BAA_5588	BAA_5588		BAA_5588	5048378	5048821	-	sugar-phosphate isomerase%2C RpiB/LacA/LacB family	identified by match to protein family HMM PF02502%3B match to protein family HMM TIGR00689%3B match to protein family HMM TIGR01120	gene	gene5526	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5588
BAA_5589	BAA_5589		BAA_5589	5048918	5049358	-	low molecular weight phosphotyrosine protein phosphatase family protein	identified by match to protein family HMM PF01451	gene	gene5527	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5589
BAA_5590	BAA_5590		BAA_5590	5049606	5050103	-	putative PTS system%2C glucose-specific IIA component	identified by match to protein family HMM PF00358%3B match to protein family HMM TIGR00830	gene	gene5528	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5590
BAA_5591	BAA_5591		BAA_5591	5050490	5050876	+	conserved hypothetical protein	identified by match to protein family HMM PF07681	gene	gene5529	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5591
BAA_5592	BAA_5592		BAA_5592	5051036	5051647	+	conserved hypothetical protein		gene	gene5530	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5592
BAA_5593	BAA_5593		BAA_5593	5051840	5052118	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5531	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5593
BAA_5594	BAA_5594		BAA_5594	5052349	5052897	-	putative membrane protein	identified by match to protein family HMM PF02659	gene	gene5532	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5594
BAA_5595	BAA_5595		BAA_5595	5052975	5054015	-	sua5/yciO/yrdC/ywlC family protein	identified by match to protein family HMM PF01300%3B match to protein family HMM PF03481%3B match to protein family HMM TIGR00057	gene	gene5533	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5595
BAA_5596	BAA_5596		BAA_5596	5054124	5054582	-	conserved hypothetical protein		gene	gene5534	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5596
BAA_5597	BAA_5597		BAA_5597	5054632	5055507	-	putative stage II sporulation protein R	identified by match to protein family HMM PF09551%3B match to protein family HMM TIGR02837	gene	gene5535	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5597
BAA_5598	BAA_5598	hemK	hemK	5055611	5056462	-	protein-(glutamine-N5) methyltransferase%2C release factor-specific	identified by match to protein family HMM PF05175%3B match to protein family HMM TIGR00536%3B match to protein family HMM TIGR03534	gene	gene5536	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5598
BAA_5599	BAA_5599	prfA	prfA	5056462	5057538	-	peptide chain release factor 1	identified by match to protein family HMM PF00472%3B match to protein family HMM PF03462%3B match to protein family HMM TIGR00019	gene	gene5537	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5599
BAA_5600	BAA_5600	tdk	tdk	5057800	5058384	-	thymidine kinase	identified by match to protein family HMM PF00265	gene	gene5538	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5600
BAA_5601	BAA_5601	rpmE	rpmE	5058493	5058738	-	50S ribosomal protein L31	identified by match to protein family HMM PF01197%3B match to protein family HMM TIGR00105	gene	gene5539	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5601
BAA_5602	BAA_5602	rho	rho	5059142	5060413	-	transcription termination factor Rho	identified by match to protein family HMM PF00006%3B match to protein family HMM PF07497%3B match to protein family HMM PF07498%3B match to protein family HMM TIGR00767	gene	gene5540	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5602
BAA_5603	BAA_5603	fbp2	fbp2	5060756	5061721	-	fructose-1%2C6-bisphosphatase%2C class II	identified by match to protein family HMM PF03320%3B match to protein family HMM TIGR00330	gene	gene5541	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5603
BAA_5604	BAA_5604	murA2	murA2	5061839	5063128	-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2	identified by match to protein family HMM PF00275%3B match to protein family HMM TIGR01072	gene	gene5542	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5604
BAA_5605	BAA_5605	fba2	fba2	5063460	5064317	-	fructose-bisphosphate aldolase%2C class II	identified by match to protein family HMM PF01116%3B match to protein family HMM TIGR00167%3B match to protein family HMM TIGR01859	gene	gene5543	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5605
BAA_5606	BAA_5606	spo0F	spo0F	5064528	5064896	-	sporulation initiation phosphotransferase F	identified by match to protein family HMM PF00072	gene	gene5544	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5606
BAA_5607	BAA_5607		BAA_5607	5065098	5065622	+	conserved hypothetical protein		gene	gene5545	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5607
BAA_5608	BAA_5608	pyrG	pyrG	5065654	5067261	-	CTP synthase	identified by match to protein family HMM PF00117%3B match to protein family HMM PF06418%3B match to protein family HMM TIGR00337	gene	gene5546	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5608
BAA_5609	BAA_5609	rpoE	rpoE	5067519	5068046	-	DNA-directed RNA polymerase%2C delta subunit	identified by match to protein family HMM PF05066	gene	gene5547	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5609
BAA_5610	BAA_5610		BAA_5610	5068201	5068830	-	transcriptional regulator%2C TetR family	identified by match to protein family HMM PF00440	gene	gene5548	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5610
BAA_5611	BAA_5611		BAA_5611	5068895	5070034	-	acyl-CoA dehydrogenase	identified by match to protein family HMM PF00441%3B match to protein family HMM PF02770%3B match to protein family HMM PF02771%3B match to protein family HMM PF08028	gene	gene5549	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5611
BAA_5612	BAA_5612		BAA_5612	5070056	5071186	-	acyl-CoA dehydrogenase	identified by match to protein family HMM PF00441%3B match to protein family HMM PF02770%3B match to protein family HMM PF02771%3B match to protein family HMM PF08028	gene	gene5550	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5612
BAA_5613	BAA_5613		BAA_5613	5071260	5072111	-	3-hydroxyacyl-CoA dehydrogenase	identified by match to protein family HMM PF00725%3B match to protein family HMM PF02737	gene	gene5551	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5613
BAA_5614	BAA_5614		BAA_5614	5072161	5073342	-	acetyl-CoA acetyltransferase	identified by match to protein family HMM PF00108%3B match to protein family HMM PF02803%3B match to protein family HMM TIGR01930	gene	gene5552	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5614
BAA_5615	BAA_5615		BAA_5615	5073453	5075564	-	ferredoxin%2C 4Fe-4S	identified by match to protein family HMM PF02754	gene	gene5553	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5615
BAA_5616	BAA_5616		BAA_5616	5075871	5077064	+	cardiolipin synthetase domain protein	identified by match to protein family HMM PF00614	gene	gene5554	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5616
BAA_5617	BAA_5617	uvdE_2	uvdE_2	5077097	5078050	+	UV damage endonuclease UvdE	identified by match to protein family HMM PF03851%3B match to protein family HMM TIGR00629	gene	gene5555	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5617
BAA_5618	BAA_5618		BAA_5618	5078649	5080856	+	sensory box/GGDEF family protein	identified by match to protein family HMM PF00563%3B match to protein family HMM PF00989%3B match to protein family HMM PF00990%3B match to protein family HMM TIGR00229%3B match to protein family HMM TIGR00254	gene	gene5556	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5618
BAA_5619	BAA_5619	papR	papR	5080875	5081021	-	PlcR associated protein%2C PapR	identified by match to protein family HMM PF05968	gene	gene5557	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5619
BAA_5620	BAA_5620		BAA_5620	5081111	5081275	-		putative transcriptional regulator PlcR%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene5558	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5620
BAA_5621	BAA_5621		BAA_5621	5081327	5081968	-		PlcR protein%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF01381	pseudogene	gene5559	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5621
BAA_5622	BAA_5622		BAA_5622	5082684	5083286	-	DNA-binding response regulator	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00196	gene	gene5560	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5622
BAA_5623	BAA_5623		BAA_5623	5083283	5084413	-	sensor histidine kinase	identified by match to protein family HMM PF02518%3B match to protein family HMM PF07730	gene	gene5561	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5623
BAA_5624	BAA_5624		BAA_5624	5084414	5085148	-	putative ABC transporter%2C permease protein	identified by match to protein family HMM PF01061	gene	gene5562	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5624
BAA_5625	BAA_5625		BAA_5625	5085145	5086047	-	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene5563	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5625
BAA_5626	BAA_5626	maP3	maP3	5086253	5086999	+	methionine aminopeptidase%2C type I	identified by match to protein family HMM PF00557%3B match to protein family HMM TIGR00500	gene	gene5564	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5626
BAA_5627	BAA_5627		BAA_5627	5087681	5087803	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5565	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5627
BAA_5628	BAA_5628		BAA_5628	5087826	5089622	+		LPXTG-motif cell wall anchor domain protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF05737	pseudogene	gene5566	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5628
BAA_5629	BAA_5629		BAA_5629	5089657	5092833	+		collagen adhesion protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF05737%3B match to protein family HMM PF05738	pseudogene	gene5567	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5629
BAA_5630	BAA_5630		BAA_5630	5092937	5095411	+		collagen adhesion protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00746%3B match to protein family HMM PF05738%3B match to protein family HMM TIGR01167	pseudogene	gene5568	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5630
BAA_5631	BAA_5631		BAA_5631	5095668	5095799	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5569	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5631
BAA_5632	BAA_5632		BAA_5632	5095899	5097299	+	putative aminopeptidase	identified by match to protein family HMM PF01546%3B match to protein family HMM PF02225%3B match to protein family HMM PF04389	gene	gene5570	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5632
BAA_5633	BAA_5633		BAA_5633	5097448	5097822	+	hypothetical protein	identified by glimmer%3B putative	gene	gene5571	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5633
BAA_5634	BAA_5634		BAA_5634	5097848	5098519	-	conserved domain protein		gene	gene5572	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5634
BAA_5635	BAA_5635		BAA_5635	5098503	5098817	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5573	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5635
BAA_5636	BAA_5636		BAA_5636	5098804	5099331	-	RNA polymerase sigma-70 factor%2C ECF subfamily	identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937	gene	gene5574	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5636
BAA_5637	BAA_5637	argS2	argS2	5099728	5101398	-	arginine--tRNA ligase	identified by match to protein family HMM PF00750%3B match to protein family HMM PF03485%3B match to protein family HMM PF05746%3B match to protein family HMM TIGR00456	gene	gene5575	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5637
BAA_5638	BAA_5638		BAA_5638	5101398	5101835	-	conserved hypothetical protein	identified by match to protein family HMM PF09148	gene	gene5576	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5638
BAA_5639	BAA_5639		BAA_5639	5102038	5103024	+	conserved hypothetical protein	identified by match to protein family HMM PF02016	gene	gene5577	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5639
BAA_5640	BAA_5640		BAA_5640	5103050	5103412	-	conserved hypothetical protein	identified by match to protein family HMM PF06486%3B match to protein family HMM TIGR01655	gene	gene5578	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5640
BAA_5641	BAA_5641		BAA_5641	5103647	5104684	+	membrane protein PfoR		gene	gene5579	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5641
BAA_5642	BAA_5642		BAA_5642	5104916	5105044	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5580	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5642
BAA_5643	BAA_5643		BAA_5643	5105032	5105904	-	putative agmatinase	identified by match to protein family HMM PF00491%3B match to protein family HMM TIGR01230	gene	gene5581	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5643
BAA_5644	BAA_5644	speE	speE	5106122	5106949	-	spermidine synthase	identified by match to protein family HMM PF01564%3B match to protein family HMM TIGR00417	gene	gene5582	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5644
BAA_5645	BAA_5645		BAA_5645	5107136	5108299	-	putative multidrug resistance protein	identified by match to protein family HMM PF07690	gene	gene5583	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5645
BAA_5646	BAA_5646		BAA_5646	5108305	5108712	-	transcriptional regulator%2C MerR family	identified by match to protein family HMM PF00376%3B match to protein family HMM PF09278	gene	gene5584	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5646
BAA_5647	BAA_5647		BAA_5647	5108744	5108863	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5585	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5647
BAA_5648	BAA_5648		BAA_5648	5108864	5109589	+	glycerophosphoryl diester phosphodiesterase family protein	identified by match to protein family HMM PF03009	gene	gene5586	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5648
BAA_5649	BAA_5649		BAA_5649	5109689	5111740	+	penicillin-binding protein	identified by match to protein family HMM PF00905%3B match to protein family HMM PF00912%3B match to protein family HMM TIGR02074	gene	gene5587	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5649
BAA_5650	BAA_5650		BAA_5650	5111963	5112472	-	conserved hypothetical protein	identified by match to protein family HMM PF08741	gene	gene5588	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5650
BAA_5651	BAA_5651		BAA_5651	5112498	5113172	-	peptidase%2C M50 family	identified by match to protein family HMM PF02163	gene	gene5589	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5651
BAA_5652	BAA_5652		BAA_5652	5113284	5113469	+	4-oxalocrotonate tautomerase	identified by match to protein family HMM PF01361%3B match to protein family HMM TIGR00013	gene	gene5590	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5652
BAA_5653	BAA_5653		BAA_5653	5113509	5114813	-	HD domain protein	identified by match to protein family HMM PF01966	gene	gene5591	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5653
BAA_5654	BAA_5654		BAA_5654	5114960	5115904	-	iron compound ABC transporter%2C iron compound-binding protein	identified by match to protein family HMM PF01497	gene	gene5592	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5654
BAA_5655	BAA_5655		BAA_5655	5116096	5116908	-	iron compound ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene5593	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5655
BAA_5656	BAA_5656		BAA_5656	5116924	5117940	-	iron compound ABC transporter%2C permease protein	identified by match to protein family HMM PF01032	gene	gene5594	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5656
BAA_5657	BAA_5657		BAA_5657	5117937	5118587	-		iron compound ABC transporter%2C permease protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01032	pseudogene	gene5595	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5657
BAA_5658	BAA_5658		BAA_5658	5118587	5118988	-		ferrichrome transport system permease protein FhuB%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01032	pseudogene	gene5596	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5658
BAA_5659	BAA_5659		BAA_5659	5119300	5119524	-	conserved hypothetical protein		gene	gene5597	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5659
BAA_5660	BAA_5660		BAA_5660	5119809	5120501	+	conserved hypothetical protein	identified by match to protein family HMM TIGR02894	gene	gene5598	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5660
BAA_5661	BAA_5661		BAA_5661	5120530	5121120	-	putative lipoprotein		gene	gene5599	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5661
BAA_5662	BAA_5662		BAA_5662	5121297	5122142	+	putative lipoate-protein ligase A	identified by match to protein family HMM PF03099	gene	gene5600	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5662
BAA_5663	BAA_5663	pta	pta	5122191	5123162	-	phosphate acetyltransferase	identified by match to protein family HMM PF01515%3B match to protein family HMM TIGR00651	gene	gene5601	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5663
BAA_5664	BAA_5664		BAA_5664	5123418	5124161	+	conserved hypothetical protein	identified by match to protein family HMM PF06778	gene	gene5602	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5664
BAA_5665	BAA_5665		BAA_5665	5124363	5125634	+	putative D-alanyl-D-alanine carboxypeptidase	identified by match to protein family HMM PF00768%3B match to protein family HMM PF07943	gene	gene5603	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5665
BAA_5666	BAA_5666	cwlJ2	cwlJ2	5125808	5126230	+	cell wall hydrolase	identified by match to protein family HMM PF07486	gene	gene5604	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5666
BAA_5667	BAA_5667	gerQ	gerQ	5126258	5126695	+	spore coat protein GerQ	identified by match to protein family HMM PF09671%3B match to protein family HMM TIGR02728	gene	gene5605	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5667
BAA_5668	BAA_5668		BAA_5668	5126726	5127094	-	conserved hypothetical protein	identified by match to protein family HMM PF04241	gene	gene5606	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5668
BAA_5669	BAA_5669		BAA_5669	5127159	5127443	-	conserved hypothetical protein		gene	gene5607	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5669
BAA_5670	BAA_5670		BAA_5670	5127450	5127998	-		potassium uptake protein%2C TrkA family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02080%3B match to protein family HMM PF02254	pseudogene	gene5608	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5670
BAA_5671	BAA_5671		BAA_5671	5128013	5128441	-		potassium channel protein%2C N-terminus%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF07885	pseudogene	gene5609	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5671
BAA_5672	BAA_5672		BAA_5672	5128537	5129820	+	xanthine/uracil permease family protein	identified by match to protein family HMM PF00860	gene	gene5610	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5672
BAA_5673	BAA_5673		BAA_5673	5129993	5130814	+	hydrolase%2C haloacid dehalogenase-like family	identified by match to protein family HMM PF00702%3B match to protein family HMM PF08282%3B match to protein family HMM TIGR00099%3B match to protein family HMM TIGR01484	gene	gene5611	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5673
BAA_5674	BAA_5674		BAA_5674	5131024	5131317	+	conserved hypothetical protein		gene	gene5612	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5674
BAA_5675	BAA_5675	ung	ung	5131356	5132033	-	uracil-DNA glycosylase	identified by match to protein family HMM PF03167%3B match to protein family HMM TIGR00628	gene	gene5613	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5675
BAA_5676	BAA_5676		BAA_5676	5132053	5133045	-	ABC transporter%2C permease protein		gene	gene5614	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5676
BAA_5677	BAA_5677		BAA_5677	5133038	5133955	-	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene5615	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5677
BAA_5678	BAA_5678		BAA_5678	5133952	5134761	-	putative lipase/acylhydrolase	identified by match to protein family HMM PF00657	gene	gene5616	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5678
BAA_5679	BAA_5679		BAA_5679	5134844	5135821	-	sugar-binding transcriptional regulator%2C LacI family	identified by match to protein family HMM PF00356%3B match to protein family HMM PF00532	gene	gene5617	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5679
BAA_5680	BAA_5680		BAA_5680	5135920	5136546	+	conserved hypothetical protein	identified by match to protein family HMM PF02588	gene	gene5618	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5680
BAA_5681	BAA_5681	hom2	hom2	5136570	5137823	-	homoserine dehydrogenase	identified by match to protein family HMM PF00742%3B match to protein family HMM PF03447	gene	gene5619	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5681
BAA_5682	BAA_5682	metA	metA	5137965	5138870	-	homoserine O-succinyltransferase	identified by match to protein family HMM PF04204%3B match to protein family HMM TIGR01001	gene	gene5620	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5682
BAA_5683	BAA_5683		BAA_5683	5138854	5140152	-	O-acetylhomoserine/O-acetylserine sulfhydrylase	identified by match to protein family HMM PF01053%3B match to protein family HMM TIGR01326	gene	gene5621	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5683
BAA_5685	BAA_5685		BAA_5685	5140670	5141902	+	voltage-gated chloride channel family protein	identified by match to protein family HMM PF00654	gene	gene5622	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5685
BAA_5686	BAA_5686		BAA_5686	5141944	5142639	-	hydrolase%2C haloacid dehalogenase-like family	identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01549%3B match to protein family HMM TIGR02254	gene	gene5623	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5686
BAA_5687	BAA_5687		BAA_5687	5142746	5143417	+	cyclic nucleotide-binding domain protein	identified by match to protein family HMM PF00027	gene	gene5624	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5687
BAA_5688	BAA_5688		BAA_5688	5143477	5144103	-	conserved hypothetical protein	identified by match to protein family HMM PF02525	gene	gene5625	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5688
BAA_5689	BAA_5689		BAA_5689	5144295	5144942	-	DNA-binding response regulator	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00196	gene	gene5626	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5689
BAA_5690	BAA_5690		BAA_5690	5144963	5145544	-		sensor histidine kinase%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF02518%3B match to protein family HMM PF07730	pseudogene	gene5627	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5690
BAA_5691	BAA_5691		BAA_5691	5145560	5146534	-		cGMP-specific and -stimulated phosphodiesterase/adenylate cyclase%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF01590	pseudogene	gene5628	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5691
BAA_5692	BAA_5692	thiD2	thiD2	5146669	5147493	+	phosphomethylpyrimidine kinase	identified by match to protein family HMM PF08543%3B match to protein family HMM TIGR00097	gene	gene5629	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5692
BAA_5693	BAA_5693		BAA_5693	5147572	5148627	-	GGDEF domain protein	identified by match to protein family HMM PF00990%3B match to protein family HMM PF07694%3B match to protein family HMM TIGR00254	gene	gene5630	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5693
BAA_5694	BAA_5694		BAA_5694	5148774	5148977	-	conserved hypothetical protein	identified by match to protein family HMM PF04328	gene	gene5631	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5694
BAA_5695	BAA_5695	cstA	cstA	5148970	5151045	-	carbon starvation protein A	identified by match to protein family HMM PF02554	gene	gene5632	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5695
BAA_5696	BAA_5696		BAA_5696	5151167	5151883	-	putative response regulator	identified by match to protein family HMM PF00072%3B match to protein family HMM PF04397	gene	gene5633	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5696
BAA_5697	BAA_5697		BAA_5697	5152093	5153292	-	major facilitator family transporter	identified by match to protein family HMM PF00083%3B match to protein family HMM PF07690	gene	gene5634	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5697
BAA_5698	BAA_5698		BAA_5698	5153285	5153449	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5635	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5698
BAA_5699	BAA_5699		BAA_5699	5153563	5154303	-	glycosyl transferase%2C WecB/TagA/CpsF family	identified by match to protein family HMM PF03808%3B match to protein family HMM TIGR00696	gene	gene5636	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5699
BAA_5700	BAA_5700		BAA_5700	5154319	5155419	-	glycosyl transferase%2C group 1 family	identified by match to protein family HMM PF00534	gene	gene5637	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5700
BAA_5701	BAA_5701		BAA_5701	5155498	5156898	-	putative membrane protein		gene	gene5638	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5701
BAA_5702	BAA_5702		BAA_5702	5157170	5157802	+	putative membrane protein	identified by match to protein family HMM PF03458	gene	gene5639	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5702
BAA_5703	BAA_5703		BAA_5703	5157933	5159234	+	methyl-accepting chemotaxis protein	identified by match to protein family HMM PF00015	gene	gene5640	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5703
BAA_5704	BAA_5704		BAA_5704	5159327	5160640	-	putative membrane protein		gene	gene5641	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5704
BAA_5705	BAA_5705		BAA_5705	5160953	5161465	+	cytosolic long-chain acyl-CoA thioester hydrolase family protein	identified by match to protein family HMM PF03061	gene	gene5642	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5705
BAA_5706	BAA_5706		BAA_5706	5161850	5163304	+	polysaccharide synthase family protein	identified by match to protein family HMM PF01943	gene	gene5643	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5706
BAA_5707	BAA_5707		BAA_5707	5163333	5164154	+	glycosyl transferase%2C group 2 family	identified by match to protein family HMM PF00535	gene	gene5644	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5707
BAA_5708	BAA_5708		BAA_5708	5164350	5165903	+	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene5645	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5708
BAA_5709	BAA_5709		BAA_5709	5165995	5166516	+		putative membrane protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5646	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5709
BAA_5710	BAA_5710		BAA_5710	5166710	5167444	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5647	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5710
BAA_5711	BAA_5711		BAA_5711	5167487	5168926	-	putative membrane protein		gene	gene5648	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5711
BAA_5712	BAA_5712		BAA_5712	5169229	5169612	+	gtrA family protein	identified by match to protein family HMM PF04138	gene	gene5649	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5712
BAA_5713	BAA_5713		BAA_5713	5169649	5170620	+	glycosyl transferase%2C group 2 family	identified by match to protein family HMM PF00535	gene	gene5650	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5713
BAA_5714	BAA_5714		BAA_5714	5170651	5171523	-	transcriptional regulator%2C TetR family	identified by match to protein family HMM PF00440	gene	gene5651	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5714
BAA_5715	BAA_5715		BAA_5715	5171664	5174780	+	transporter%2C AcrB/AcrD/AcrF family	identified by match to protein family HMM PF00873	gene	gene5652	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5715
BAA_5716	BAA_5716	msrAB	msrAB	5174809	5175774	-	peptide-methionine (S)-S-oxide reductase	identified by match to protein family HMM PF01625%3B match to protein family HMM PF01641%3B match to protein family HMM TIGR00357%3B match to protein family HMM TIGR00401	gene	gene5653	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5716
BAA_5717	BAA_5717		BAA_5717	5175785	5175907	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5654	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5717
BAA_5718	BAA_5718		BAA_5718	5175876	5176910	-	putative membrane protein	identified by match to protein family HMM PF01594	gene	gene5655	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5718
BAA_5719	BAA_5719		BAA_5719	5177237	5177929	-	putative membrane protein	identified by match to protein family HMM PF04172	gene	gene5656	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5719
BAA_5720	BAA_5720		BAA_5720	5177964	5178395	-	putative holin	identified by match to protein family HMM PF03788	gene	gene5657	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5720
BAA_5721	BAA_5721		BAA_5721	5178528	5179268	-	response regulator LytR	identified by match to protein family HMM PF00072%3B match to protein family HMM PF04397	gene	gene5658	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5721
BAA_5722	BAA_5722		BAA_5722	5179246	5181015	-	sensor histidine kinase LytS	identified by match to protein family HMM PF01590%3B match to protein family HMM PF02518%3B match to protein family HMM PF06580%3B match to protein family HMM PF07694	gene	gene5659	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5722
BAA_5724	BAA_5724		BAA_5724	5181341	5182642	+	major facilitator family transporter	identified by match to protein family HMM PF00083%3B match to protein family HMM PF07690	gene	gene5660	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5724
BAA_5725	BAA_5725		BAA_5725	5182739	5184307	-	osmoprotectant transporter%2C BCCT family	identified by match to protein family HMM PF02028	gene	gene5661	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5725
BAA_5726	BAA_5726	nos	nos	5184670	5185740	-	nitric-oxide synthase%2C oxygenase subunit	identified by match to protein family HMM PF02898	gene	gene5662	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5726
BAA_5727	BAA_5727	sodA2	sodA2	5185957	5186583	+	superoxide dismutase%2C Mn	identified by match to protein family HMM PF00081%3B match to protein family HMM PF02777	gene	gene5663	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5727
BAA_5728	BAA_5728		BAA_5728	5186672	5187550	-	conserved hypothetical protein	identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF07993	gene	gene5664	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5728
BAA_5729	BAA_5729		BAA_5729	5187659	5188249	-	putative transporter	identified by match to protein family HMM PF02293	gene	gene5665	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5729
BAA_5730	BAA_5730		BAA_5730	5188676	5189077	+	hypothetical protein	identified by glimmer%3B putative	gene	gene5666	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5730
BAA_5731	BAA_5731	galE2	galE2	5189221	5190237	-	UDP-glucose 4-epimerase	identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF07993%3B match to protein family HMM TIGR01179	gene	gene5667	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5731
BAA_5732	BAA_5732		BAA_5732	5190462	5191109	-	channel protein%2C hemolysin III family	identified by match to protein family HMM PF03006%3B match to protein family HMM TIGR01065	gene	gene5668	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5732
BAA_5733	BAA_5733		BAA_5733	5191274	5191834	+	conserved hypothetical protein	identified by match to protein family HMM PF08876	gene	gene5669	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5733
BAA_5734	BAA_5734		BAA_5734	5191877	5193322	-	ATP-dependent RNA helicase%2C DEAD/DEAH box family	identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF03880	gene	gene5670	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5734
BAA_5735	BAA_5735		BAA_5735	5193509	5194540	-	putative membrane protein	identified by match to protein family HMM PF01757	gene	gene5671	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5735
BAA_5736	BAA_5736	guaC	guaC	5194781	5195764	+	GMP reductase	identified by match to protein family HMM PF00478%3B match to protein family HMM TIGR01306	gene	gene5672	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5736
BAA_5737	BAA_5737		BAA_5737	5195899	5197716	+	putative oligoendopeptidase F	identified by match to protein family HMM PF01432%3B match to protein family HMM PF08439%3B match to protein family HMM TIGR00181	gene	gene5673	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5737
BAA_5738	BAA_5738		BAA_5738	5197754	5198632	-	conserved hypothetical protein	identified by match to protein family HMM PF04055	gene	gene5674	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5738
BAA_5739	BAA_5739		BAA_5739	5198814	5199317	-	conserved hypothetical protein TIGR00246	identified by match to protein family HMM PF02590%3B match to protein family HMM TIGR00246	gene	gene5675	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5739
BAA_5740	BAA_5740		BAA_5740	5199353	5199538	-	conserved hypothetical protein		gene	gene5676	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5740
BAA_5741	BAA_5741		BAA_5741	5199592	5200767	-	serine protease	identified by match to protein family HMM PF00089	gene	gene5677	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5741
BAA_5742	BAA_5742		BAA_5742	5200831	5201625	-	metallo-beta-lactamase family protein	identified by match to protein family HMM PF00753	gene	gene5678	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5742
BAA_5743	BAA_5743		BAA_5743	5201609	5202451	-	yycI protein	identified by match to protein family HMM PF09648	gene	gene5679	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5743
BAA_5744	BAA_5744		BAA_5744	5202432	5203754	-	YycH protein	identified by match to protein family HMM PF07435	gene	gene5680	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5744
BAA_5745	BAA_5745	yycG	yycG	5203745	5205586	-	sensory box histidine kinase YycG	identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF00989%3B match to protein family HMM PF02518%3B match to protein family HMM TIGR00229	gene	gene5681	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5745
BAA_5746	BAA_5746	yycF	yycF	5205590	5206297	-	DNA-binding response regulator YycF	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486	gene	gene5682	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5746
BAA_5747	BAA_5747		BAA_5747	5206697	5206774	-	tRNA-Phe		tRNA	gene5683	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5747
BAA_5748	BAA_5748		BAA_5748	5206814	5206891	-	tRNA-Asp		tRNA	gene5684	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5748
BAA_5749	BAA_5749		BAA_5749	5206907	5206983	-	tRNA-Glu		tRNA	gene5685	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5749
BAA_5750	BAA_5750		BAA_5750	5206995	5207072	-	tRNA-Lys		tRNA	gene5686	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5750
BAA_5751	BAA_5751	purA	purA	5207211	5208500	-	adenylosuccinate synthase	identified by match to protein family HMM PF00709%3B match to protein family HMM TIGR00184	gene	gene5687	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5751
BAA_5752	BAA_5752	dnaB_2	dnaB_2	5208716	5210077	-	replicative DNA helicase	identified by match to protein family HMM PF00772%3B match to protein family HMM PF03796%3B match to protein family HMM TIGR00665	gene	gene5688	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5752
BAA_5753	BAA_5753	rplI	rplI	5210105	5210551	-	50S ribosomal protein L9	identified by match to protein family HMM PF01281%3B match to protein family HMM PF03948%3B match to protein family HMM TIGR00158	gene	gene5689	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5753
BAA_5754	BAA_5754		BAA_5754	5210548	5212521	-	DHH subfamily 1 protein	identified by match to protein family HMM PF01368%3B match to protein family HMM PF02272	gene	gene5690	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5754
BAA_5755	BAA_5755		BAA_5755	5212600	5213538	-	conserved hypothetical protein		gene	gene5691	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5755
BAA_5756	BAA_5756	rpsR	rpsR	5213616	5213849	-	30S ribosomal protein S18	identified by match to protein family HMM PF01084%3B match to protein family HMM TIGR00165	gene	gene5692	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5756
BAA_5757	BAA_5757	ssb1	ssb1	5213895	5214416	-	single-stranded DNA-binding protein	identified by match to protein family HMM PF00436%3B match to protein family HMM PF01336%3B match to protein family HMM TIGR00621	gene	gene5693	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5757
BAA_5758	BAA_5758	rpsF	rpsF	5214443	5214733	-	30S ribosomal protein S6	identified by match to protein family HMM PF01250%3B match to protein family HMM TIGR00166	gene	gene5694	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5758
BAA_5759	BAA_5759	ychF	ychF	5214925	5216025	-	GTP-binding protein YchF	identified by match to protein family HMM PF01926%3B match to protein family HMM PF06071%3B match to protein family HMM TIGR00092	gene	gene5695	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5759
BAA_5760	BAA_5760		BAA_5760	5216141	5216338	-	conserved hypothetical protein	identified by match to protein family HMM PF06107	gene	gene5696	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5760
BAA_5761	BAA_5761		BAA_5761	5216359	5217240	-	mechanosensitive ion channel family protein	identified by match to protein family HMM PF00924	gene	gene5697	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5761
BAA_5762	BAA_5762		BAA_5762	5217500	5218096	+	putative sporulation protein YyaC	identified by match to protein family HMM PF06866%3B match to protein family HMM TIGR02841	gene	gene5698	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5762
BAA_5763	BAA_5763	spo0J	spo0J	5218117	5218968	-	stage 0 sporulation protein J	identified by match to protein family HMM PF02195%3B match to protein family HMM TIGR00180	gene	gene5699	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5763
BAA_5764	BAA_5764	soJ	soJ	5218961	5219722	-	sporulation initiation inhibitor protein Soj	identified by match to protein family HMM PF01656	gene	gene5700	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5764
BAA_5765	BAA_5765		BAA_5765	5219913	5220785	-	putative stage 0 sporulation protein J	identified by match to protein family HMM PF02195%3B match to protein family HMM TIGR00180	gene	gene5701	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5765
BAA_5766	BAA_5766	gidB	gidB	5220890	5221609	-	16S rRNA methyltransferase GidB	identified by match to protein family HMM PF02527%3B match to protein family HMM TIGR00138	gene	gene5702	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5766
BAA_5767	BAA_5767	gidA	gidA	5221631	5223520	-	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	identified by match to protein family HMM PF01134%3B match to protein family HMM TIGR00136	gene	gene5703	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5767
BAA_5768	BAA_5768	trmE	trmE	5223567	5224943	-	tRNA modification GTPase TrmE	identified by match to protein family HMM PF01926%3B match to protein family HMM PF08477%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00450	gene	gene5704	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5768
BAA_5769	BAA_5769	jag	jag	5225170	5225787	-	jag protein	identified by match to protein family HMM PF01424	gene	gene5705	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5769
BAA_5770	BAA_5770	spoIIIJ2	spoIIIJ2	5225784	5226551	-	stage III sporulation protein J	identified by match to protein family HMM PF02096%3B match to protein family HMM TIGR03592	gene	gene5706	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5770
BAA_5771	BAA_5771	rnpA	rnpA	5226591	5226950	-	ribonuclease P protein component	identified by match to protein family HMM PF00825%3B match to protein family HMM TIGR00188	gene	gene5707	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5771
BAA_5772	BAA_5772	rpmH	rpmH	5227027	5227161	-	50S ribosomal protein L34	identified by match to protein family HMM PF00468%3B match to protein family HMM TIGR01030	gene	gene5708	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5772
BAA_5773	BAA_5773		BAA_5773	4122965	4123041	+	ctRNA		gene	gene4500	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_5773
BAA_A0001	BAA_A0001		BAA_A0001	246	674	+	conserved hypothetical protein		gene	gene5709	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0001
BAA_A0002	BAA_A0002		BAA_A0002	928	1071	+	hypothetical protein	identified by glimmer%3B putative	gene	gene5710	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0002
BAA_A0003	BAA_A0003		BAA_A0003	1260	1373	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5711	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0003
BAA_A0004	BAA_A0004		BAA_A0004	1391	2029	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5712	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0004
BAA_A0005	BAA_A0005		BAA_A0005	2046	2279	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5713	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0005
BAA_A0006	BAA_A0006		BAA_A0006	2555	3139	+	hypothetical protein	identified by glimmer%3B putative	gene	gene5714	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0006
BAA_A0007	BAA_A0007		BAA_A0007	3123	3737	+	hypothetical protein	identified by glimmer%3B putative	gene	gene5715	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0007
BAA_A0008	BAA_A0008		BAA_A0008	3788	4423	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5716	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0008
BAA_A0009	BAA_A0009		BAA_A0009	4423	5052	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5717	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0009
BAA_A0010	BAA_A0010		BAA_A0010	5388	6101	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5718	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0010
BAA_A0011	BAA_A0011		BAA_A0011	6118	6696	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5719	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0011
BAA_A0012	BAA_A0012		BAA_A0012	6843	6919	-			gene	gene5720	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0012
BAA_A0013	BAA_A0013		BAA_A0013	6942	8750	-	reverse transcriptase/endonuclease protein	identified by match to protein family HMM PF00078%3B match to protein family HMM PF01844%3B match to protein family HMM PF08388	gene	gene5721	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0013
BAA_A0014	BAA_A0014		BAA_A0014	9354	11939	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5722	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0014
BAA_A0015	BAA_A0015		BAA_A0015	12011	12238	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5723	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0015
BAA_A0016	BAA_A0016		BAA_A0016	12254	13345	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5724	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0016
BAA_A0017	BAA_A0017		BAA_A0017	13448	13591	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5725	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0017
BAA_A0018	BAA_A0018		BAA_A0018	13607	14020	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5726	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0018
BAA_A0019	BAA_A0019		BAA_A0019	14623	15327	+	hypothetical protein	identified by glimmer%3B putative	gene	gene5727	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0019
BAA_A0020	BAA_A0020		BAA_A0020	15438	19400	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5728	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0020
BAA_A0021	BAA_A0021		BAA_A0021	19464	21158	-	conserved hypothetical protein		gene	gene5729	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0021
BAA_A0022	BAA_A0022		BAA_A0022	21317	21430	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5730	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0022
BAA_A0023	BAA_A0023		BAA_A0023	21543	21977	+	hypothetical protein	identified by glimmer%3B putative	gene	gene5731	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0023
BAA_A0024	BAA_A0024		BAA_A0024	22586	24295	+	conserved hypothetical protein		gene	gene5732	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0024
BAA_A0025	BAA_A0025		BAA_A0025	25522	26469	+	conserved hypothetical protein	identified by match to protein family HMM PF02899	gene	gene5733	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0025
BAA_A0026	BAA_A0026		BAA_A0026	26555	26674	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5734	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0026
BAA_A0027	BAA_A0027		BAA_A0027	26671	26886	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5735	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0027
BAA_A0028	BAA_A0028		BAA_A0028	27064	28560	+	hypothetical protein	identified by glimmer%3B putative	gene	gene5736	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0028
BAA_A0029	BAA_A0029		BAA_A0029	28754	28921	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5737	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0029
BAA_A0030	BAA_A0030		BAA_A0030	29041	29565	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5738	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0030
BAA_A0031	BAA_A0031		BAA_A0031	29574	30365	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5739	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0031
BAA_A0032	BAA_A0032		BAA_A0032	30401	30676	-		phosphoadenosine phosphosulfate reductase%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5740	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0032
BAA_A0033	BAA_A0033		BAA_A0033	30800	31135	-	conserved hypothetical protein	identified by match to protein family HMM PF05168	gene	gene5741	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0033
BAA_A0034	BAA_A0034		BAA_A0034	31210	31294	-			gene	gene5742	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0034
BAA_A0035	BAA_A0035		BAA_A0035	31389	33320	-	group II intron reverse transcriptase/maturase	identified by match to protein family HMM PF00078%3B match to protein family HMM PF01844	gene	gene5743	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0035
BAA_A0036	BAA_A0036		BAA_A0036	33677	33805	+	hypothetical protein	identified by glimmer%3B putative	gene	gene5744	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0036
BAA_A0037	BAA_A0037		BAA_A0037	34079	34477	-	nucleotidyltransferase domain protein	identified by match to protein family HMM PF01909	gene	gene5745	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0037
BAA_A0038	BAA_A0038		BAA_A0038	34674	34847	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5746	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0038
BAA_A0039	BAA_A0039		BAA_A0039	34943	35065	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5747	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0039
BAA_A0040	BAA_A0040		BAA_A0040	35110	35280	-		ypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5748	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0040
BAA_A0041	BAA_A0041		BAA_A0041	35500	35784	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5749	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0041
BAA_A0042	BAA_A0042		BAA_A0042	36143	36256	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5750	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0042
BAA_A0043	BAA_A0043		BAA_A0043	36485	36772	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5751	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0043
BAA_A0044	BAA_A0044		BAA_A0044	37089	37913	+	hypothetical protein	identified by glimmer%3B putative	gene	gene5752	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0044
BAA_A0045	BAA_A0045		BAA_A0045	37913	38482	+	hypothetical protein	identified by glimmer%3B putative	gene	gene5753	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0045
BAA_A0046	BAA_A0046		BAA_A0046	38548	39474	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5754	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0046
BAA_A0047	BAA_A0047		BAA_A0047	39484	40467	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5755	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0047
BAA_A0048	BAA_A0048		BAA_A0048	40823	41602	-	nucleotidyltransferase domain protein	identified by match to protein family HMM PF01909	gene	gene5756	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0048
BAA_A0049	BAA_A0049		BAA_A0049	41618	42202	-	transcriptional regulator%2C TetR family	identified by match to protein family HMM PF00440	gene	gene5757	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0049
BAA_A0050	BAA_A0050		BAA_A0050	42418	43623	+		transposase for insertion sequence element D%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF01609	pseudogene	gene5758	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0050
BAA_A0051	BAA_A0051		BAA_A0051	43654	43854	+		transposase for insertion sequence element D%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene5759	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0051
BAA_A0052	BAA_A0052		BAA_A0052	44197	44310	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5760	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0052
BAA_A0053	BAA_A0053		BAA_A0053	44720	44929	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5761	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0053
BAA_A0054	BAA_A0054		BAA_A0054	44980	45810	-		Abi-like protein%3B this region contains one or more premature stops and/or frameshifts%3B identified by match to protein family HMM PF07751	pseudogene	gene5762	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0054
BAA_A0055	BAA_A0055		BAA_A0055	45803	45970	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5763	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0055
BAA_A0056	BAA_A0056		BAA_A0056	46530	47111	+	acetyltransferase%2C gnat family	identified by match to protein family HMM PF00583	gene	gene5764	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0056
BAA_A0057	BAA_A0057		BAA_A0057	47297	48727	+	transposase for insertion sequence element D	identified by match to protein family HMM PF01609	gene	gene5765	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0057
BAA_A0058	BAA_A0058		BAA_A0058	48996	50432	-	IS231-related%2C transposase	identified by match to protein family HMM PF01609	gene	gene5766	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0058
BAA_A0059	BAA_A0059		BAA_A0059	50554	50736	-	conserved domain protein		gene	gene5767	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0059
BAA_A0060	BAA_A0060		BAA_A0060	50828	50947	-	conserved domain protein		gene	gene5768	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0060
BAA_A0061	BAA_A0061		BAA_A0061	51301	51498	+	conserved domain protein	identified by match to protein family HMM PF01381	gene	gene5769	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0061
BAA_A0062	BAA_A0062		BAA_A0062	51525	51851	+	pXO1-41		gene	gene5770	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0062
BAA_A0063	BAA_A0063		BAA_A0063	51974	52162	+	conserved domain protein		gene	gene5771	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0063
BAA_A0064	BAA_A0064		BAA_A0064	52327	55656	-	conjugation protein%2C TraG/TraD family	identified by match to protein family HMM PF09397	gene	gene5772	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0064
BAA_A0065	BAA_A0065		BAA_A0065	55674	56144	-	pXO1-43		gene	gene5773	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0065
BAA_A0066	BAA_A0066		BAA_A0066	56251	57537	-	pXO1-44		gene	gene5774	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0066
BAA_A0067	BAA_A0067	repX	repX	57974	59281	-	plasmid replication protein RepX	identified by match to protein family HMM PF00091	gene	gene5775	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0067
BAA_A0068	BAA_A0068		BAA_A0068	59309	59659	-	tubulin/FtsZ family%2C GTPase domain protein		gene	gene5776	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0068
BAA_A0069	BAA_A0069		BAA_A0069	60245	60850	+	pXO1-47		gene	gene5777	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0069
BAA_A0070	BAA_A0070		BAA_A0070	61042	61269	+	conserved domain protein		gene	gene5778	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0070
BAA_A0071	BAA_A0071		BAA_A0071	61414	61578	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5779	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0071
BAA_A0072	BAA_A0072		BAA_A0072	62508	63644	+	conserved hypothetical protein		gene	gene5780	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0072
BAA_A0073	BAA_A0073		BAA_A0073	64354	65307	+	pXO1-50		gene	gene5781	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0073
BAA_A0074	BAA_A0074		BAA_A0074	65327	66805	+	conserved hypothetical protein		gene	gene5782	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0074
BAA_A0075	BAA_A0075		BAA_A0075	66822	67271	+	pXO1-52		gene	gene5783	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0075
BAA_A0076	BAA_A0076		BAA_A0076	67297	67692	+	pXO1-53		gene	gene5784	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0076
BAA_A0077	BAA_A0077		BAA_A0077	67949	69130	+	surface layer protein	identified by match to protein family HMM PF00395	gene	gene5785	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0077
BAA_A0078	BAA_A0078		BAA_A0078	69285	71636	+	S-layer domain protein		gene	gene5786	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0078
BAA_A0079	BAA_A0079		BAA_A0079	71768	71929	+	conserved hypothetical protein		gene	gene5787	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0079
BAA_A0080	BAA_A0080		BAA_A0080	72112	72297	-	conserved hypothetical protein		gene	gene5788	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0080
BAA_A0081	BAA_A0081	cpaB	cpaB	72672	73277	+		Flp pilus assembly protein CpaB%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF08666	pseudogene	gene5789	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0081
BAA_A0082	BAA_A0082		BAA_A0082	73548	74366	+	SAF domain family protein		gene	gene5790	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0082
BAA_A0083	BAA_A0083		BAA_A0083	74383	75816	+	bacterial type II/IV secretion system protein	identified by match to protein family HMM PF00437	gene	gene5791	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0083
BAA_A0084	BAA_A0084		BAA_A0084	75809	76741	+	putative membrane protein		gene	gene5792	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0084
BAA_A0085	BAA_A0085		BAA_A0085	76743	77453	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5793	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0085
BAA_A0086	BAA_A0086		BAA_A0086	77455	77610	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5794	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0086
BAA_A0087	BAA_A0087		BAA_A0087	77653	77856	+	conserved domain protein		gene	gene5795	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0087
BAA_A0088	BAA_A0088		BAA_A0088	77929	78135	+	conserved domain protein		gene	gene5796	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0088
BAA_A0089	BAA_A0089		BAA_A0089	78204	78812	+	conserved hypothetical protein		gene	gene5797	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0089
BAA_A0090	BAA_A0090		BAA_A0090	78844	79968	+	pXO1-66	identified by match to protein family HMM PF06030	gene	gene5798	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0090
BAA_A0091	BAA_A0091		BAA_A0091	79999	81747	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5799	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0091
BAA_A0092	BAA_A0092		BAA_A0092	81967	82512	+	pXO1-68		gene	gene5800	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0092
BAA_A0093	BAA_A0093		BAA_A0093	82509	82997	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5801	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0093
BAA_A0094	BAA_A0094		BAA_A0094	83214	83342	+	hypothetical protein	identified by glimmer%3B putative	gene	gene5802	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0094
BAA_A0095	BAA_A0095		BAA_A0095	83870	84334	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5803	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0095
BAA_A0096	BAA_A0096		BAA_A0096	84514	84630	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5804	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0096
BAA_A0097	BAA_A0097		BAA_A0097	84613	85926	+	pXO1-70		gene	gene5805	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0097
BAA_A0098	BAA_A0098		BAA_A0098	86064	86960	+	conserved hypothetical protein	identified by match to protein family HMM TIGR01784	gene	gene5806	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0098
BAA_A0099	BAA_A0099		BAA_A0099	87046	87315	-	pXO1-73		gene	gene5807	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0099
BAA_A0100	BAA_A0100		BAA_A0100	87748	88089	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5809	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0100
BAA_A0101	BAA_A0101		BAA_A0101	87573	87758	+	conserved domain protein		gene	gene5808	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0101
BAA_A0102	BAA_A0102		BAA_A0102	88088	88294	+	pXO1-74		gene	gene5810	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0102
BAA_A0103	BAA_A0103		BAA_A0103	88361	88711	+	pXO1-75		gene	gene5811	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0103
BAA_A0104	BAA_A0104		BAA_A0104	88712	89626	+	pXO1-76		gene	gene5812	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0104
BAA_A0105	BAA_A0105		BAA_A0105	89629	91728	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5813	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0105
BAA_A0106	BAA_A0106		BAA_A0106	91759	95427	+		conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene5814	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0106
BAA_A0107	BAA_A0107		BAA_A0107	95449	95775	+		putative membrane protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene5815	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0107
BAA_A0108	BAA_A0108		BAA_A0108	95772	96227	+		peptidase%2C M23/M37 family protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene5816	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0108
BAA_A0109	BAA_A0109		BAA_A0109	96246	97976	+		peptidase%2C M23/M37 family protein%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF00877%3B match to protein family HMM PF01551	pseudogene	gene5817	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0109
BAA_A0110	BAA_A0110		BAA_A0110	97993	98574	+	conserved hypothetical protein		gene	gene5818	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0110
BAA_A0111	BAA_A0111		BAA_A0111	98731	99114	+	conserved hypothetical protein		gene	gene5819	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0111
BAA_A0112	BAA_A0112		BAA_A0112	99105	99410	+	CAAX amino terminal protease family protein		gene	gene5820	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0112
BAA_A0113	BAA_A0113		BAA_A0113	99540	99827	+	hypothetical protein	identified by glimmer%3B putative	gene	gene5821	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0113
BAA_A0114	BAA_A0114		BAA_A0114	99903	100634	+	caax amino protease family protein	identified by match to protein family HMM PF02517	gene	gene5822	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0114
BAA_A0115	BAA_A0115		BAA_A0115	101092	102237	-	putative membrane protein	identified by match to protein family HMM PF04171%3B match to protein family HMM PF04235	gene	gene5823	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0115
BAA_A0116	BAA_A0116		BAA_A0116	102277	102759	-	pXO1-87	identified by match to protein family HMM PF00085	gene	gene5824	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0116
BAA_A0117	BAA_A0117		BAA_A0117	103025	103201	+	hypothetical protein	identified by glimmer%3B putative	gene	gene5825	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0117
BAA_A0118	BAA_A0118		BAA_A0118	103640	103888	-		Iron Transport-associated domain%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF05031	pseudogene	gene5826	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0118
BAA_A0119	BAA_A0119		BAA_A0119	104631	104945	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5827	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0119
BAA_A0120	BAA_A0120		BAA_A0120	105086	105562	-		conserved hypothetical protein%2C truncation%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene5828	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0120
BAA_A0121	BAA_A0121		BAA_A0121	106457	106630	+	hypothetical protein	identified by glimmer%3B putative	gene	gene5829	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0121
BAA_A0122	BAA_A0122		BAA_A0122	107087	109045	+	S-layer protein	identified by match to protein family HMM PF00395	gene	gene5830	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0122
BAA_A0123	BAA_A0123		BAA_A0123	109315	110157	+	phosphatase%2C PAP2 family	identified by match to protein family HMM PF01569	gene	gene5831	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0123
BAA_A0124	BAA_A0124		BAA_A0124	110422	110649	-	conserved domain protein		gene	gene5832	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0124
BAA_A0125	BAA_A0125		BAA_A0125	111271	111387	-	conserved domain protein		gene	gene5833	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0125
BAA_A0126	BAA_A0126		BAA_A0126	111393	111692	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5834	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0126
BAA_A0127	BAA_A0127		BAA_A0127	111689	112789	+		putative hyaluronate synthase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00535%3B match to protein family HMM PF03142	pseudogene	gene5835	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0127
BAA_A0128	BAA_A0128		BAA_A0128	112831	113718	+	UTP--glucose-1-phosphate uridylyltransferase	identified by match to protein family HMM PF00483%3B match to protein family HMM TIGR01099	gene	gene5836	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0128
BAA_A0129	BAA_A0129		BAA_A0129	113745	115076	+	UDP-glucose 6-dehydrogenase	identified by match to protein family HMM PF00984%3B match to protein family HMM PF03720%3B match to protein family HMM PF03721%3B match to protein family HMM TIGR03026	gene	gene5837	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0129
BAA_A0130	BAA_A0130		BAA_A0130	115761	116039	+	hypothetical protein	identified by glimmer%3B putative	gene	gene5838	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0130
BAA_A0131	BAA_A0131		BAA_A0131	116434	116601	+		IS1627s1%2C transposase%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5839	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0131
BAA_A0132	BAA_A0132		BAA_A0132	116622	117266	+		transposase in Marinococcus halophilus%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5840	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0132
BAA_A0133	BAA_A0133		BAA_A0133	117287	117445	+		IS1627%2C transposase%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5841	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0133
BAA_A0134	BAA_A0134		BAA_A0134	117585	117827	-	NADH dehydrogenase subunit 5		gene	gene5842	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0134
BAA_A0135	BAA_A0135		BAA_A0135	117906	118163	+		transposase in Marinococcus halophilus%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5843	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0135
BAA_A0136	BAA_A0136		BAA_A0136	118178	118393	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5844	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0136
BAA_A0137	BAA_A0137		BAA_A0137	118457	118702	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5845	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0137
BAA_A0138	BAA_A0138		BAA_A0138	118743	119060	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5846	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0138
BAA_A0139	BAA_A0139		BAA_A0139	119157	119612	-	nucleotide sugar dehydrogenase subfamily protein		gene	gene5847	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0139
BAA_A0140	BAA_A0140		BAA_A0140	120436	120813	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5848	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0140
BAA_A0141	BAA_A0141		BAA_A0141	120943	121395	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5849	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0141
BAA_A0142	BAA_A0142		BAA_A0142	121449	121562	-	conserved domain protein		gene	gene5850	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0142
BAA_A0143	BAA_A0143		BAA_A0143	121696	121812	+	hypothetical protein	identified by glimmer%3B putative	gene	gene5851	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0143
BAA_A0144	BAA_A0144	cya	cya	122872	125274	+	calmodulin-sensitive adenylate cyclase	identified by match to protein family HMM PF03497%3B match to protein family HMM PF07737	gene	gene5852	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0144
BAA_A0145	BAA_A0145	apt2	apt2	125561	125893	+		adenine phosphoribosyltransferase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00156	pseudogene	gene5853	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0145
BAA_A0146	BAA_A0146		BAA_A0146	125974	126255	-		transposase for%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5854	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0146
BAA_A0147	BAA_A0147		BAA_A0147	126273	126476	-		transposase for%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5855	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0147
BAA_A0148	BAA_A0148		BAA_A0148	126482	126787	-		transposase%2C IS4 family%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5856	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0148
BAA_A0149	BAA_A0149		BAA_A0149	126862	127434	-		transposase%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5857	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0149
BAA_A0150	BAA_A0150		BAA_A0150	127463	127690	-	conserved domain protein		gene	gene5858	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0150
BAA_A0151	BAA_A0151	atxA	atxA	128029	129456	-	anthrax toxin expression trans-acting positive regulator	identified by match to protein family HMM PF00874%3B match to protein family HMM PF05043%3B match to protein family HMM PF08279%3B match to protein family HMM PF08280	gene	gene5859	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0151
BAA_A0152	BAA_A0152		BAA_A0152	129814	130266	+	conserved domain protein	identified by match to protein family HMM PF09385	gene	gene5860	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0152
BAA_A0153	BAA_A0153		BAA_A0153	130437	130925	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5861	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0153
BAA_A0154	BAA_A0154		BAA_A0154	131992	132105	+	hypothetical protein	identified by glimmer%3B putative	gene	gene5862	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0154
BAA_A0155	BAA_A0155		BAA_A0155	132175	132309	+	conserved domain protein		gene	gene5863	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0155
BAA_A0156	BAA_A0156		BAA_A0156	132512	132742	+	hypothetical protein	identified by glimmer%3B putative	gene	gene5864	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0156
BAA_A0157	BAA_A0157	traX	traX	133388	136405	-	transposase X	identified by match to protein family HMM PF01526	gene	gene5865	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0157
BAA_A0158	BAA_A0158		BAA_A0158	136507	137088	+	transposon resolvase	identified by match to protein family HMM PF00239%3B match to protein family HMM PF02796	gene	gene5866	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0158
BAA_A0159	BAA_A0159	gerXB	gerXB	137417	138496	+	spore germination protein GerXB	identified by match to protein family HMM PF03845%3B match to protein family HMM TIGR00912	gene	gene5867	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0159
BAA_A0160	BAA_A0160	gerXA	gerXA	138540	140018	+	spore germination protein GerXA	identified by match to protein family HMM PF03323	gene	gene5868	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0160
BAA_A0161	BAA_A0161	gerXC	gerXC	140041	140958	+	spore germination protein GerXC	identified by match to protein family HMM TIGR02887	gene	gene5869	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0161
BAA_A0162	BAA_A0162		BAA_A0162	141041	141172	+		hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by glimmer%3B putative	pseudogene	gene5870	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0162
BAA_A0163	BAA_A0163		BAA_A0163	141567	141692	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5871	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0163
BAA_A0164	BAA_A0164		BAA_A0164	141700	141849	+	hypothetical protein	identified by glimmer%3B putative	gene	gene5872	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0164
BAA_A0165	BAA_A0165		BAA_A0165	142002	142172	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5873	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0165
BAA_A0166	BAA_A0166		BAA_A0166	142592	143269	+		cryptic protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5874	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0166
BAA_A0167	BAA_A0167		BAA_A0167	143571	143684	+	hypothetical protein	identified by glimmer%3B putative	gene	gene5875	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0167
BAA_A0168	BAA_A0168	pagA	pagA	144043	146337	+	protective antigen	identified by match to protein family HMM PF03495%3B match to protein family HMM PF07691	gene	gene5876	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0168
BAA_A0169	BAA_A0169	pagR	pagR	147260	147559	+	transcriptional repressor PagR	identified by match to protein family HMM PF01022	gene	gene5877	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0169
BAA_A0170	BAA_A0170		BAA_A0170	147948	148121	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5878	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0170
BAA_A0171	BAA_A0171		BAA_A0171	148676	148906	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5879	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0171
BAA_A0172	BAA_A0172		BAA_A0172	148930	149196	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5880	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0172
BAA_A0173	BAA_A0173	lef	lef	149621	152050	-	anthrax lethal factor endopeptidase	identified by match to protein family HMM PF07737	gene	gene5881	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0173
BAA_A0174	BAA_A0174		BAA_A0174	152016	152141	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5882	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0174
BAA_A0175	BAA_A0175		BAA_A0175	152609	152989	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5883	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0175
BAA_A0176	BAA_A0176		BAA_A0176	152973	153134	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5884	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0176
BAA_A0177	BAA_A0177		BAA_A0177	153118	153342	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5885	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0177
BAA_A0178	BAA_A0178		BAA_A0178	153721	154071	+		transcriptional regulator%2C ArsR family protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5886	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0178
BAA_A0179	BAA_A0179		BAA_A0179	154099	154281	+	conserved domain protein		gene	gene5887	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0179
BAA_A0180	BAA_A0180		BAA_A0180	154278	154481	+	transition state regulatory protein%2C AbrB		gene	gene5888	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0180
BAA_A0181	BAA_A0181		BAA_A0181	154982	155164	-		DNA-binding protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene5889	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0181
BAA_A0182	BAA_A0182		BAA_A0182	155195	155308	-		putative DNA-binding protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene5890	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0182
BAA_A0183	BAA_A0183		BAA_A0183	155521	156564	-	integrase/recombinase%2C putative	identified by match to protein family HMM PF00589	gene	gene5891	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0183
BAA_A0184	BAA_A0184		BAA_A0184	156541	156666	+	hypothetical protein	identified by glimmer%3B putative	gene	gene5892	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0184
BAA_A0185	BAA_A0185		BAA_A0185	156793	157143	+	conserved hypothetical protein		gene	gene5893	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0185
BAA_A0186	BAA_A0186		BAA_A0186	157165	157677	+	pXO1-101		gene	gene5894	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0186
BAA_A0187	BAA_A0187		BAA_A0187	157923	158036	-	conserved domain protein		gene	gene5895	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0187
BAA_A0188	BAA_A0188		BAA_A0188	158472	158624	+		conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5896	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0188
BAA_A0189	BAA_A0189		BAA_A0189	158889	159077	+		conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene5897	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0189
BAA_A0190	BAA_A0190		BAA_A0190	159366	159662	+		conserved hypothetical protein%3B this region contains one or more premature stops and/or frameshifts	pseudogene	gene5898	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0190
BAA_A0191	BAA_A0191		BAA_A0191	159876	160409	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5899	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0191
BAA_A0192	BAA_A0192		BAA_A0192	160542	161774	+	conserved hypothetical protein	identified by match to protein family HMM PF06013	gene	gene5900	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0192
BAA_A0193	BAA_A0193		BAA_A0193	161787	162239	+	pXO1-97	identified by match to protein family HMM PF09346	gene	gene5901	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0193
BAA_A0194	BAA_A0194		BAA_A0194	162361	162519	-		IS1627%2C transposase%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5902	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0194
BAA_A0195	BAA_A0195		BAA_A0195	162540	163220	-		transposase in Marinococcus halophilus%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5903	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0195
BAA_A0196	BAA_A0196		BAA_A0196	163205	163525	-	transposase	identified by match to protein family HMM PF01527	gene	gene5904	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0196
BAA_A0197	BAA_A0197		BAA_A0197	163633	163938	+	transposase		gene	gene5905	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0197
BAA_A0198	BAA_A0198		BAA_A0198	163905	164546	+		transposase in Marinococcus halophilus%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene5906	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0198
BAA_A0199	BAA_A0199		BAA_A0199	164610	164789	+		transposase%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene5907	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0199
BAA_A0200	BAA_A0200		BAA_A0200	164852	164971	+		transposase%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene5908	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0200
BAA_A0201	BAA_A0201		BAA_A0201	165624	166337	+	putative zinc-binding lipoprotein AdcA	identified by match to protein family HMM PF09223	gene	gene5909	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0201
BAA_A0202	BAA_A0202		BAA_A0202	166447	166701	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5910	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0202
BAA_A0203	BAA_A0203		BAA_A0203	166962	168011	+	pXO1-131	identified by match to protein family HMM PF04607	gene	gene5911	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0203
BAA_A0204	BAA_A0204		BAA_A0204	168255	169340	+	integrase/recombinase%2C phage integrase family	identified by match to protein family HMM PF00589	gene	gene5912	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0204
BAA_A0205	BAA_A0205		BAA_A0205	169563	171020	-	pXO1-133		gene	gene5913	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0205
BAA_A0206	BAA_A0206		BAA_A0206	171162	171539	-	pXO1-134		gene	gene5914	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0206
BAA_A0207	BAA_A0207		BAA_A0207	171529	171852	-	putative transposase		gene	gene5915	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0207
BAA_A0208	BAA_A0208		BAA_A0208	171883	172332	-	pXO1-135		gene	gene5916	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0208
BAA_A0209	BAA_A0209		BAA_A0209	172572	173666	+	tetratricopeptide repeat domain protein		gene	gene5917	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0209
BAA_A0210	BAA_A0210		BAA_A0210	173663	173803	+	conserved hypothetical protein		gene	gene5918	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0210
BAA_A0211	BAA_A0211	hfq	hfq	173996	174181	+	RNA chaperone Hfq	identified by match to protein family HMM PF01423%3B match to protein family HMM TIGR02383	gene	gene5919	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0211
BAA_A0212	BAA_A0212		BAA_A0212	174487	174780	-	transcriptional repressor PagR	identified by match to protein family HMM PF01022	gene	gene5920	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0212
BAA_A0213	BAA_A0213		BAA_A0213	174868	175290	-		disulfide bond formation protein C%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02600	pseudogene	gene5921	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0213
BAA_A0214	BAA_A0214		BAA_A0214	175334	175624	-	conserved hypothetical protein		gene	gene5922	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0214
BAA_A0215	BAA_A0215		BAA_A0215	175698	175898	-	conserved hypothetical protein		gene	gene5923	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0215
BAA_A0216	BAA_A0216		BAA_A0216	175950	176594	-	thermonuclease	identified by match to protein family HMM PF00565	gene	gene5924	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0216
BAA_A0217	BAA_A0217		BAA_A0217	176639	176848	-	conserved hypothetical protein		gene	gene5925	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0217
BAA_A0218	BAA_A0218	topX	topX	177023	179686	-	DNA topoisomerase 1	identified by match to protein family HMM PF01131%3B match to protein family HMM PF01396%3B match to protein family HMM PF01751	gene	gene5926	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0218
BAA_A0219	BAA_A0219		BAA_A0219	180253	180657	-	putative transposase DNA-binding domain family	identified by match to protein family HMM PF07282	gene	gene5927	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0219
BAA_A0220	BAA_A0220		BAA_A0220	180798	181538	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5928	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_A0220
BAA_B0001	BAA_B0001		BAA_B0001	11	1567	-	conserved hypothetical protein		gene	gene5929	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0001
BAA_B0002	BAA_B0002		BAA_B0002	1586	2182	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5930	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0002
BAA_B0003	BAA_B0003		BAA_B0003	2194	2481	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5931	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0003
BAA_B0004	BAA_B0004		BAA_B0004	2789	3637	-	conserved hypothetical protein		gene	gene5932	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0004
BAA_B0005	BAA_B0005		BAA_B0005	3634	3909	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5933	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0005
BAA_B0006	BAA_B0006		BAA_B0006	3998	4606	-	conserved hypothetical protein		gene	gene5934	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0006
BAA_B0007	BAA_B0007		BAA_B0007	4632	5774	-	NLP/P60 family protein	identified by match to protein family HMM PF00877	gene	gene5935	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0007
BAA_B0008	BAA_B0008		BAA_B0008	5776	7710	-	conserved hypothetical protein		gene	gene5936	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0008
BAA_B0009	BAA_B0009		BAA_B0009	7727	8395	-	conserved hypothetical protein		gene	gene5937	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0009
BAA_B0010	BAA_B0010		BAA_B0010	8459	8773	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5938	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0010
BAA_B0011	BAA_B0011		BAA_B0011	8776	8979	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5939	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0011
BAA_B0012	BAA_B0012		BAA_B0012	8981	9235	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5940	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0012
BAA_B0013	BAA_B0013		BAA_B0013	9253	12111	-	putative membrane protein		gene	gene5941	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0013
BAA_B0014	BAA_B0014		BAA_B0014	12111	12929	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5942	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0014
BAA_B0015	BAA_B0015		BAA_B0015	12931	14766	-		conjugation protein%2C trag/trad family%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5943	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0015
BAA_B0016	BAA_B0016		BAA_B0016	14815	16677	-	conserved domain protein		gene	gene5944	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0016
BAA_B0017	BAA_B0017		BAA_B0017	16781	17059	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5945	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0017
BAA_B0018	BAA_B0018		BAA_B0018	17077	17328	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5946	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0018
BAA_B0019	BAA_B0019		BAA_B0019	17347	17493	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5947	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0019
BAA_B0020	BAA_B0020		BAA_B0020	17512	17874	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5948	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0020
BAA_B0021	BAA_B0021		BAA_B0021	17914	18663	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5949	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0021
BAA_B0022	BAA_B0022		BAA_B0022	18660	19493	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5950	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0022
BAA_B0023	BAA_B0023		BAA_B0023	19526	20857	-	bacterial type II/IV secretion system protein	identified by match to protein family HMM PF00437	gene	gene5951	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0023
BAA_B0024	BAA_B0024		BAA_B0024	20874	21266	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5952	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0024
BAA_B0025	BAA_B0025		BAA_B0025	21320	21469	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5953	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0025
BAA_B0026	BAA_B0026		BAA_B0026	21544	21918	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5954	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0026
BAA_B0027	BAA_B0027		BAA_B0027	21938	23413	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5955	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0027
BAA_B0028	BAA_B0028		BAA_B0028	23410	26172	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5956	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0028
BAA_B0029	BAA_B0029		BAA_B0029	26304	26633	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5957	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0029
BAA_B0030	BAA_B0030		BAA_B0030	26684	26920	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5958	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0030
BAA_B0031	BAA_B0031		BAA_B0031	26871	27014	+	hypothetical protein	identified by glimmer%3B putative	gene	gene5959	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0031
BAA_B0032	BAA_B0032		BAA_B0032	27111	27227	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5960	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0032
BAA_B0033	BAA_B0033		BAA_B0033	27305	27793	-	putative liporotein		gene	gene5961	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0033
BAA_B0034	BAA_B0034		BAA_B0034	28068	28598	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5962	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0034
BAA_B0035	BAA_B0035		BAA_B0035	29105	29407	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5963	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0035
BAA_B0036	BAA_B0036		BAA_B0036	30283	30447	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5964	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0036
BAA_B0037	BAA_B0037		BAA_B0037	30434	31291	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5965	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0037
BAA_B0038	BAA_B0038		BAA_B0038	31282	31650	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5966	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0038
BAA_B0039	BAA_B0039		BAA_B0039	31906	32085	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5967	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0039
BAA_B0040	BAA_B0040		BAA_B0040	32163	32927	-	conserved hypothetical protein		gene	gene5968	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0040
BAA_B0041	BAA_B0041		BAA_B0041	33130	34668	-	plasmid replication protein	identified by match to protein family HMM PF08708	gene	gene5969	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0041
BAA_B0042	BAA_B0042		BAA_B0042	35069	35236	+	hypothetical protein	identified by glimmer%3B putative	gene	gene5970	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0042
BAA_B0043	BAA_B0043		BAA_B0043	35574	36440	+	ATPase%2C ParA family	identified by match to protein family HMM PF01656	gene	gene5971	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0043
BAA_B0044	BAA_B0044		BAA_B0044	36433	36819	+	conserved hypothetical protein		gene	gene5972	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0044
BAA_B0045	BAA_B0045		BAA_B0045	37018	37251	+	hypothetical protein	identified by glimmer%3B putative	gene	gene5973	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0045
BAA_B0046	BAA_B0046		BAA_B0046	37571	37723	+	hypothetical protein	identified by glimmer%3B putative	gene	gene5974	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0046
BAA_B0047	BAA_B0047		BAA_B0047	37723	37839	+	hypothetical protein	identified by glimmer%3B putative	gene	gene5975	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0047
BAA_B0048	BAA_B0048		BAA_B0048	38199	38327	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5976	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0048
BAA_B0049	BAA_B0049		BAA_B0049	38460	40055	+	surface-layer N-acetylmuramoyl-L-alanine amidase	identified by match to protein family HMM PF00395%3B match to protein family HMM PF01520	gene	gene5977	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0049
BAA_B0050	BAA_B0050		BAA_B0050	40296	40655	-		transposase in Marinococcus halophilus%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5978	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0050
BAA_B0051	BAA_B0051		BAA_B0051	40683	40841	-		conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene5979	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0051
BAA_B0052	BAA_B0052		BAA_B0052	41207	41371	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5980	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0052
BAA_B0053	BAA_B0053		BAA_B0053	41533	41862	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5981	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0053
BAA_B0054	BAA_B0054		BAA_B0054	42445	42756	-	conserved hypothetical protein	identified by match to protein family HMM PF01906	gene	gene5982	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0054
BAA_B0055	BAA_B0055		BAA_B0055	42805	43470	-	caax amino protease family protein	identified by match to protein family HMM PF02517	gene	gene5983	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0055
BAA_B0056	BAA_B0056		BAA_B0056	44181	44645	+	pXO2-47	identified by match to protein family HMM PF04463	gene	gene5984	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0056
BAA_B0057	BAA_B0057		BAA_B0057	45022	45612	+	transcriptional regulator%2C TetR family	identified by match to protein family HMM PF00440	gene	gene5985	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0057
BAA_B0058	BAA_B0058		BAA_B0058	46049	46906	+		IS231-related%2C transposase%2C internal deletion%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01609	pseudogene	gene5986	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0058
BAA_B0059	BAA_B0059		BAA_B0059	46897	47436	+		transposase for insertion sequence element D%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5987	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0059
BAA_B0060	BAA_B0060		BAA_B0060	47588	48022	-		bacitracin transport permease%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01569	pseudogene	gene5988	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0060
BAA_B0061	BAA_B0061		BAA_B0061	48019	48186	-		undecaprenyl-diphosphatase%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene5989	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0061
BAA_B0062	BAA_B0062		BAA_B0062	48285	48458	-	conserved domain protein		gene	gene5990	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0062
BAA_B0063	BAA_B0063		BAA_B0063	48575	48757	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5991	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0063
BAA_B0064	BAA_B0064		BAA_B0064	48808	48924	-	hypothetical protein	identified by glimmer%3B putative	gene	gene5992	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0064
BAA_B0065	BAA_B0065	acpB	acpB	49971	51419	-	capsule synthesis trans-acting positive regulator AcpB	identified by match to protein family HMM PF05043%3B match to protein family HMM PF08279%3B match to protein family HMM PF08280	gene	gene5993	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0065
BAA_B0066	BAA_B0066		BAA_B0066	52488	52826	+	conserved hypothetical protein	identified by match to protein family HMM PF06486%3B match to protein family HMM TIGR01655	gene	gene5994	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0066
BAA_B0067	BAA_B0067	capE	capE	53190	53333	-	polyglutamate capsule biosynthesis protein CapE		gene	gene5995	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0067
BAA_B0068	BAA_B0068	capD	capD	53348	54934	-	capsule anchoring protein CapD	identified by match to protein family HMM PF01019	gene	gene5996	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0068
BAA_B0069	BAA_B0069	capA	capA	54931	56166	-	capsule biosynthesis protein CapA	identified by match to protein family HMM PF09587	gene	gene5997	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0069
BAA_B0071	BAA_B0071	capC	capC	56178	56627	-	capsule biosynthesis protein CapC		gene	gene5998	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0071
BAA_B0072	BAA_B0072	capB	capB	56642	58036	-	capsule biosynthesis protein CapB	identified by match to protein family HMM PF08245	gene	gene5999	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0072
BAA_B0073	BAA_B0073		BAA_B0073	59485	59784	+	transcriptional repressor PagR		gene	gene6000	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0073
BAA_B0074	BAA_B0074		BAA_B0074	59796	59951	-		IS231-related%2C transposase%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene6001	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0074
BAA_B0075	BAA_B0075		BAA_B0075	59987	60235	-		transposase for insertion sequence element%3B this region contains one or more premature stops and/or frameshifts	pseudogene	gene6002	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0075
BAA_B0076	BAA_B0076		BAA_B0076	60608	60727	-		transposase for insertion sequence element%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene6003	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0076
BAA_B0077	BAA_B0077		BAA_B0077	61426	61977	-	signal peptidase I	identified by match to protein family HMM PF00717%3B match to protein family HMM TIGR02227	gene	gene6004	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0077
BAA_B0078	BAA_B0078		BAA_B0078	62330	63265	-	hypothetical protein	identified by glimmer%3B putative	gene	gene6005	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0078
BAA_B0079	BAA_B0079		BAA_B0079	63412	63822	-	conserved hypothetical protein	identified by match to protein family HMM PF09385	gene	gene6006	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0079
BAA_B0080	BAA_B0080		BAA_B0080	64063	64470	+		anthrax toxin expression trans-acting positive regulator%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF08279%3B match to protein family HMM PF08280	pseudogene	gene6007	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0080
BAA_B0081	BAA_B0081		BAA_B0081	64496	64954	+		anthrax toxin expression trans-acting positive regulator%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00874	pseudogene	gene6008	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0081
BAA_B0082	BAA_B0082		BAA_B0082	65026	65487	+		anthrax toxin expression trans-acting positive regulator%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene6009	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0082
BAA_B0083	BAA_B0083		BAA_B0083	65598	65741	+	hypothetical protein	identified by glimmer%3B putative	gene	gene6010	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0083
BAA_B0084	BAA_B0084		BAA_B0084	66031	66648	+	amino acid efflux protein	identified by match to protein family HMM PF01810%3B match to protein family HMM TIGR00949	gene	gene6011	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0084
BAA_B0085	BAA_B0085		BAA_B0085	67712	67846	+		putative transposase%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene6012	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0085
BAA_B0086	BAA_B0086	acpA	acpA	69482	70933	+	capsule synthesis trans-acting positive regulator AcpA	identified by match to protein family HMM PF05043%3B match to protein family HMM PF08279%3B match to protein family HMM PF08280	gene	gene6013	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0086
BAA_B0087	BAA_B0087		BAA_B0087	71448	71699	+	conserved domain protein		gene	gene6014	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0087
BAA_B0088	BAA_B0088		BAA_B0088	72018	72179	+	ThiJ/PfpI domain protein		gene	gene6015	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0088
BAA_B0089	BAA_B0089		BAA_B0089	72213	72353	-	conserved hypothetical protein		gene	gene6016	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0089
BAA_B0090	BAA_B0090		BAA_B0090	72628	72963	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene6017	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0090
BAA_B0091	BAA_B0091		BAA_B0091	72960	73508	+		caax amino protease family protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02517	pseudogene	gene6018	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0091
BAA_B0092	BAA_B0092		BAA_B0092	74065	75624	-	oligopeptide ABC transporter	identified by match to protein family HMM PF00496	gene	gene6019	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0092
BAA_B0093	BAA_B0093		BAA_B0093	75771	75914	-	conserved hypothetical protein		gene	gene6020	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0093
BAA_B0094	BAA_B0094		BAA_B0094	76116	76295	-	conserved domain protein		gene	gene6021	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0094
BAA_B0095	BAA_B0095		BAA_B0095	76666	77259	-	conserved hypothetical protein		gene	gene6022	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0095
BAA_B0096	BAA_B0096		BAA_B0096	77487	78752	+	impB/mucB/samB family protein	identified by match to protein family HMM PF00817	gene	gene6023	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0096
BAA_B0097	BAA_B0097		BAA_B0097	78749	79090	+	conserved hypothetical protein	identified by match to protein family HMM PF08863	gene	gene6024	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0097
BAA_B0098	BAA_B0098		BAA_B0098	79114	79488	+	conserved hypothetical protein		gene	gene6025	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0098
BAA_B0099	BAA_B0099		BAA_B0099	79788	81314	-	FunZ family protein		gene	gene6026	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0099
BAA_B0100	BAA_B0100		BAA_B0100	81476	81721	-	conserved hypothetical protein		gene	gene6027	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0100
BAA_B0101	BAA_B0101		BAA_B0101	81833	82072	-	conserved domain protein		gene	gene6028	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0101
BAA_B0102	BAA_B0102		BAA_B0102	82880	84505	+	pXO2-73		gene	gene6029	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0102
BAA_B0103	BAA_B0103		BAA_B0103	84821	85639	+	site-specific recombinase	identified by match to protein family HMM PF00589	gene	gene6030	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0103
BAA_B0104	BAA_B0104		BAA_B0104	85711	85893	+	conserved hypothetical protein		gene	gene6031	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0104
BAA_B0105	BAA_B0105		BAA_B0105	85989	86426	-	ImpB/MucB/SamB family protein		gene	gene6032	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0105
BAA_B0106	BAA_B0106		BAA_B0106	86641	87087	-	caax amino protease family protein	identified by match to protein family HMM PF02517	gene	gene6033	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0106
BAA_B0107	BAA_B0107		BAA_B0107	87233	88402	-		DNA topoisomerase%3B this region contains one or more premature stops and/or frameshifts%3B identified by match to protein family HMM PF01131%3B match to protein family HMM PF01396	pseudogene	gene6034	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0107
BAA_B0108	BAA_B0108	topB	topB	88457	89257	-		DNA topoisomerase III%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF01751	pseudogene	gene6035	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0108
BAA_B0109	BAA_B0109		BAA_B0109	89634	90668	-	conserved hypothetical protein		gene	gene6036	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0109
BAA_B0110	BAA_B0110		BAA_B0110	90748	91299	-	conserved hypothetical protein	identified by match to protein family HMM PF04307	gene	gene6037	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0110
BAA_B0111	BAA_B0111		BAA_B0111	91321	92307	-	conserved hypothetical protein		gene	gene6038	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0111
BAA_B0112	BAA_B0112		BAA_B0112	92371	94146	-	conserved hypothetical protein		gene	gene6039	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0112
BAA_B0113	BAA_B0113		BAA_B0113	94137	94346	-	conserved hypothetical protein		gene	gene6040	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0113
BAA_B0114	BAA_B0114		BAA_B0114	94369	94797	-	conserved hypothetical protein		gene	gene6041	http://www.ncbi.nlm.nih.gov/gene/?term=BAA_B0114