locus-tag class description KM400_00005 PF00308 Bacterial dnaA protein KM400_00005 PF08299 Bacterial dnaA protein helix-turn-helix KM400_00005 PF11638 DnaA N-terminal domain KM400_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain KM400_00010 PF02767 DNA polymerase III beta subunit, central domain KM400_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain KM400_00020 PF02463 RecF/RecN/SMC N terminal domain KM400_00025 PF01751 Toprim domain KM400_00025 PF00204 DNA gyrase B KM400_00025 PF00986 DNA gyrase B subunit, carboxyl terminus KM400_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_00030 PF03989 DNA gyrase C-terminal domain, beta-propeller KM400_00030 PF00521 DNA gyrase/topoisomerase IV, subunit A KM400_00060 PF14175 YaaC-like Protein KM400_00065 PF00478 IMP dehydrogenase / GMP reductase domain KM400_00065 PF00571 CBS domain KM400_00070 PF07943 Penicillin-binding protein 5, C-terminal domain KM400_00070 PF00768 D-alanyl-D-alanine carboxypeptidase KM400_00075 PF01680 SOR/SNZ family KM400_00080 PF01174 SNO glutamine amidotransferase family KM400_00085 PF02403 Seryl-tRNA synthetase N-terminal domain KM400_00085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM400_00100 PF01712 Deoxynucleoside kinase KM400_00105 PF01712 Deoxynucleoside kinase KM400_00110 PF00857 Isochorismatase family KM400_00115 PF14437 MafB19-like deaminase KM400_00125 PF12169 DNA polymerase III subunits gamma and tau domain III KM400_00130 PF02575 YbaB/EbfC DNA-binding family KM400_00135 PF13662 Toprim domain KM400_00135 PF02132 RecR protein KM400_00140 PF10704 Protein of unknown function (DUF2508) KM400_00145 PF07441 SigmaK-factor processing regulatory protein BofA KM400_00180 PF01276 Orn/Lys/Arg decarboxylase, major domain KM400_00180 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KM400_00185 PF02223 Thymidylate kinase KM400_00190 PF09115 DNA polymerase III, delta subunit, C terminal KM400_00195 PF04468 PSP1 C-terminal conserved region KM400_00200 PF06156 Initiation control protein YabA KM400_00205 PF05175 Methyltransferase small domain KM400_00210 PF01541 GIY-YIG catalytic domain KM400_00215 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM400_00220 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KM400_00220 PF18277 AbrB C-terminal domain KM400_00225 PF08264 Anticodon-binding domain of tRNA KM400_00225 PF09334 tRNA synthetases class I (M) KM400_00225 PF01588 Putative tRNA binding domain KM400_00230 PF01026 TatD related DNase KM400_00235 PF13662 Toprim domain KM400_00235 PF13331 Domain of unknown function (DUF4093) KM400_00240 PF00398 Ribosomal RNA adenine dimethylase KM400_00245 PF05582 YabG peptidase U57 KM400_00250 PF06257 Biofilm formation stimulator VEG KM400_00255 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM400_00260 PF00288 GHMP kinases N terminal domain KM400_00260 PF08544 GHMP kinases C terminal KM400_00265 PF09182 Bacterial purine repressor, N-terminal KM400_00265 PF00156 Phosphoribosyl transferase domain KM400_00270 PF01042 Endoribonuclease L-PSP KM400_00275 PF04026 SpoVG KM400_00280 PF00483 Nucleotidyl transferase KM400_00280 PF00132 Bacterial transferase hexapeptide (six repeats) KM400_00285 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KM400_00285 PF14572 Phosphoribosyl synthetase-associated domain KM400_00290 PF01195 Peptidyl-tRNA hydrolase KM400_00300 PF17757 UvrB interaction domain KM400_00300 PF03461 TRCF domain KM400_00300 PF00271 Helicase conserved C-terminal domain KM400_00300 PF00270 DEAD/DEAH box helicase KM400_00300 PF02559 CarD-like/TRCF domain KM400_00305 PF15714 Stage V sporulation protein T C-terminal, transcription factor KM400_00305 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KM400_00310 PF14667 Polysaccharide biosynthesis C-terminal domain KM400_00310 PF01943 Polysaccharide biosynthesis protein KM400_00315 PF03819 MazG nucleotide pyrophosphohydrolase domain KM400_00315 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM400_00320 PF01479 S4 domain KM400_00325 PF07873 YabP family KM400_00330 PF09578 Spore cortex protein YabQ (Spore_YabQ) KM400_00340 PF00575 S1 RNA binding domain KM400_00355 PF07228 Stage II sporulation protein E (SpoIIE) KM400_00360 PF11734 TilS substrate C-terminal domain KM400_00360 PF09179 TilS substrate binding domain KM400_00360 PF01171 PP-loop family KM400_00365 PF00156 Phosphoribosyl transferase domain KM400_00370 PF00004 ATPase family associated with various cellular activities (AAA) KM400_00370 PF06480 FtsH Extracellular KM400_00370 PF01434 Peptidase family M41 KM400_00370 PF17862 AAA+ lid domain KM400_00375 PF03309 Type III pantothenate kinase KM400_00380 PF01430 Hsp33 protein KM400_00385 PF00291 Pyridoxal-phosphate dependent enzyme KM400_00390 PF00425 chorismate binding enzyme KM400_00390 PF04715 Anthranilate synthase component I, N terminal region KM400_00395 PF00117 Glutamine amidotransferase class-I KM400_00400 PF01063 Amino-transferase class IV KM400_00405 PF00809 Pterin binding enzyme KM400_00410 PF02152 Dihydroneopterin aldolase KM400_00415 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KM400_00420 PF01381 Helix-turn-helix KM400_00425 PF01207 Dihydrouridine synthase (Dus) KM400_00430 PF01336 OB-fold nucleic acid binding domain KM400_00430 PF00152 tRNA synthetases class II (D, K and N) KM400_00450 PF17727 CtsR C-terminal dimerization domain KM400_00450 PF05848 CtsR N-terminal HTH domain KM400_00455 PF02151 UvrB/uvrC motif KM400_00460 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain KM400_00465 PF02861 Clp amino terminal domain, pathogenicity island component KM400_00465 PF17871 AAA lid domain KM400_00465 PF07724 AAA domain (Cdc48 subfamily) KM400_00465 PF00004 ATPase family associated with various cellular activities (AAA) KM400_00465 PF10431 C-terminal, D2-small domain, of ClpB protein KM400_00470 PF18073 Rubredoxin metal binding domain KM400_00475 PF10635 DisA bacterial checkpoint controller linker region KM400_00475 PF02457 DisA bacterial checkpoint controller nucleotide-binding KM400_00485 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KM400_00490 PF02542 YgbB family KM400_00495 PF00749 tRNA synthetases class I (E and Q), catalytic domain KM400_00500 PF06426 Serine acetyltransferase, N-terminal KM400_00500 PF00132 Bacterial transferase hexapeptide (six repeats) KM400_00505 PF01406 tRNA synthetases class I (C) catalytic domain KM400_00505 PF09190 DALR domain KM400_00510 PF00636 Ribonuclease III domain KM400_00515 PF00588 SpoU rRNA Methylase family KM400_00515 PF08032 RNA 2'-O ribose methyltransferase substrate binding KM400_00520 PF05991 YacP-like NYN domain KM400_00525 PF08281 Sigma-70, region 4 KM400_00525 PF04542 Sigma-70 region 2 KM400_00530 PF00471 Ribosomal protein L33 KM400_00535 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KM400_00540 PF02357 Transcription termination factor nusG KM400_00540 PF00467 KOW motif KM400_00545 PF03946 Ribosomal protein L11, N-terminal domain KM400_00545 PF00298 Ribosomal protein L11, RNA binding domain KM400_00550 PF00687 Ribosomal protein L1p/L10e family KM400_00555 PF00466 Ribosomal protein L10 KM400_00560 PF00542 Ribosomal protein L7/L12 C-terminal domain KM400_00560 PF16320 Ribosomal protein L7/L12 dimerisation domain KM400_00565 PF05175 Methyltransferase small domain KM400_00570 PF04563 RNA polymerase beta subunit KM400_00570 PF04565 RNA polymerase Rpb2, domain 3 KM400_00570 PF10385 RNA polymerase beta subunit external 1 domain KM400_00570 PF00562 RNA polymerase Rpb2, domain 6 KM400_00570 PF04560 RNA polymerase Rpb2, domain 7 KM400_00570 PF04561 RNA polymerase Rpb2, domain 2 KM400_00575 PF04997 RNA polymerase Rpb1, domain 1 KM400_00575 PF00623 RNA polymerase Rpb1, domain 2 KM400_00575 PF05000 RNA polymerase Rpb1, domain 4 KM400_00575 PF04998 RNA polymerase Rpb1, domain 5 KM400_00575 PF04983 RNA polymerase Rpb1, domain 3 KM400_00580 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family KM400_00585 PF00164 Ribosomal protein S12/S23 KM400_00590 PF00177 Ribosomal protein S7p/S5e KM400_00595 PF03144 Elongation factor Tu domain 2 KM400_00595 PF00009 Elongation factor Tu GTP binding domain KM400_00595 PF03764 Elongation factor G, domain IV KM400_00595 PF14492 Elongation Factor G, domain II KM400_00595 PF00679 Elongation factor G C-terminus KM400_00600 PF00009 Elongation factor Tu GTP binding domain KM400_00600 PF03143 Elongation factor Tu C-terminal domain KM400_00600 PF03144 Elongation factor Tu domain 2 KM400_00605 PF00338 Ribosomal protein S10p/S20e KM400_00610 PF00297 Ribosomal protein L3 KM400_00615 PF00573 Ribosomal protein L4/L1 family KM400_00620 PF00276 Ribosomal protein L23 KM400_00625 PF03947 Ribosomal Proteins L2, C-terminal domain KM400_00625 PF00181 Ribosomal Proteins L2, RNA binding domain KM400_00630 PF00203 Ribosomal protein S19 KM400_00635 PF00237 Ribosomal protein L22p/L17e KM400_00640 PF00189 Ribosomal protein S3, C-terminal domain KM400_00640 PF07650 KH domain KM400_00645 PF00252 Ribosomal protein L16p/L10e KM400_00650 PF00831 Ribosomal L29 protein KM400_00655 PF00366 Ribosomal protein S17 KM400_00660 PF00238 Ribosomal protein L14p/L23e KM400_00665 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KM400_00665 PF00467 KOW motif KM400_00670 PF00281 Ribosomal protein L5 KM400_00670 PF00673 ribosomal L5P family C-terminus KM400_00675 PF00253 Ribosomal protein S14p/S29e KM400_00680 PF00410 Ribosomal protein S8 KM400_00685 PF00347 Ribosomal protein L6 KM400_00690 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KM400_00695 PF03719 Ribosomal protein S5, C-terminal domain KM400_00695 PF00333 Ribosomal protein S5, N-terminal domain KM400_00700 PF00327 Ribosomal protein L30p/L7e KM400_00705 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KM400_00710 PF00344 SecY translocase KM400_00715 PF05191 Adenylate kinase, active site lid KM400_00720 PF00557 Metallopeptidase family M24 KM400_00725 PF01176 Translation initiation factor 1A / IF-1 KM400_00730 PF00444 Ribosomal protein L36 KM400_00735 PF00416 Ribosomal protein S13/S18 KM400_00740 PF00411 Ribosomal protein S11 KM400_00745 PF01000 RNA polymerase Rpb3/RpoA insert domain KM400_00745 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KM400_00745 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KM400_00750 PF01196 Ribosomal protein L17 KM400_00755 PF00005 ABC transporter KM400_00760 PF00005 ABC transporter KM400_00765 PF02361 Cobalt transport protein KM400_00770 PF01416 tRNA pseudouridine synthase KM400_00775 PF00572 Ribosomal protein L13 KM400_00780 PF00380 Ribosomal protein S9/S16 KM400_00790 PF01520 N-acetylmuramoyl-L-alanine amidase KM400_00795 PF10609 NUBPL iron-transfer P-loop NTPase KM400_00800 PF17898 Spore germination GerD central core domain KM400_00805 PF14089 KinB-signalling pathway activation in sporulation KM400_00810 PF01522 Polysaccharide deacetylase KM400_00885 PF00491 Arginase family KM400_00890 PF02457 DisA bacterial checkpoint controller nucleotide-binding KM400_00895 PF07949 YbbR-like protein KM400_00900 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KM400_00900 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KM400_00900 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KM400_00900 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KM400_00910 PF01380 SIS domain KM400_00915 PF00561 alpha/beta hydrolase fold KM400_00920 PF00392 Bacterial regulatory proteins, gntR family KM400_00920 PF07729 FCD domain KM400_00925 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM400_00925 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM400_00930 PF02447 GntP family permease KM400_00935 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM400_00935 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain KM400_00940 PF00326 Prolyl oligopeptidase family KM400_00940 PF07676 WD40-like Beta Propeller Repeat KM400_00975 PF00528 Binding-protein-dependent transport system inner membrane component KM400_00980 PF09383 NIL domain KM400_00980 PF00005 ABC transporter KM400_00985 PF03180 NLPA lipoprotein KM400_00990 PF00107 Zinc-binding dehydrogenase KM400_00990 PF08240 Alcohol dehydrogenase GroES-like domain KM400_01005 PF07690 Major Facilitator Superfamily KM400_01015 PF07690 Major Facilitator Superfamily KM400_01030 PF00528 Binding-protein-dependent transport system inner membrane component KM400_01035 PF12911 N-terminal TM domain of oligopeptide transport permease C KM400_01035 PF00528 Binding-protein-dependent transport system inner membrane component KM400_01040 PF00005 ABC transporter KM400_01040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM400_01045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM400_01045 PF00005 ABC transporter KM400_01050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM400_01060 PF12833 Helix-turn-helix domain KM400_01075 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM400_01080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM400_01085 PF00248 Aldo/keto reductase family KM400_01090 PF03807 NADP oxidoreductase coenzyme F420-dependent KM400_01090 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM400_01095 PF04973 Nicotinamide mononucleotide transporter KM400_01100 PF06800 Sugar transport protein KM400_01105 PF00528 Binding-protein-dependent transport system inner membrane component KM400_01115 PF12728 Helix-turn-helix domain KM400_01115 PF12727 PBP superfamily domain KM400_01125 PF03466 LysR substrate binding domain KM400_01125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM400_01130 PF00892 EamA-like transporter family KM400_01135 PF14142 YrzO-like protein KM400_01145 PF01553 Acyltransferase KM400_01155 PF00356 Bacterial regulatory proteins, lacI family KM400_01155 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KM400_01165 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM400_01165 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM400_01175 PF01026 TatD related DNase KM400_01180 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) KM400_01205 PF16326 ABC transporter C-terminal domain KM400_01205 PF00005 ABC transporter KM400_01205 PF12848 ABC transporter KM400_01220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM400_01225 PF00528 Binding-protein-dependent transport system inner membrane component KM400_01230 PF12911 N-terminal TM domain of oligopeptide transport permease C KM400_01230 PF00528 Binding-protein-dependent transport system inner membrane component KM400_01235 PF00005 ABC transporter KM400_01235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM400_01240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM400_01240 PF00005 ABC transporter KM400_01270 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM400_01275 PF01557 Fumarylacetoacetate (FAA) hydrolase family KM400_01285 PF07690 Major Facilitator Superfamily KM400_01295 PF02875 Mur ligase family, glutamate ligase domain KM400_01295 PF08245 Mur ligase middle domain KM400_01295 PF01225 Mur ligase family, catalytic domain KM400_01300 PF00270 DEAD/DEAH box helicase KM400_01300 PF00271 Helicase conserved C-terminal domain KM400_01305 PF03851 UV-endonuclease UvdE KM400_01310 PF01694 Rhomboid family KM400_01315 PF01648 4'-phosphopantetheinyl transferase superfamily KM400_01325 PF00842 Alanine racemase, C-terminal domain KM400_01325 PF01168 Alanine racemase, N-terminal domain KM400_01330 PF01402 Ribbon-helix-helix protein, copG family KM400_01335 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system KM400_01340 PF17674 HHH domain KM400_01340 PF00575 S1 RNA binding domain KM400_01340 PF09371 Tex-like protein N-terminal domain KM400_01340 PF16921 Tex protein YqgF-like domain KM400_01350 PF10263 SprT-like family KM400_01350 PF17283 SprT-like zinc ribbon domain KM400_01435 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KM400_01440 PF00814 Glycoprotease family KM400_01445 PF00583 Acetyltransferase (GNAT) family KM400_01450 PF00814 Glycoprotease family KM400_01455 PF00005 ABC transporter KM400_01455 PF12848 ABC transporter KM400_01455 PF16326 ABC transporter C-terminal domain KM400_01460 PF06971 Putative DNA-binding protein N-terminus KM400_01460 PF02629 CoA binding domain KM400_01470 PF02517 CPBP intramembrane metalloprotease KM400_01475 PF00166 Chaperonin 10 Kd subunit KM400_01480 PF00118 TCP-1/cpn60 chaperonin family KM400_01485 PF00117 Glutamine amidotransferase class-I KM400_01485 PF00958 GMP synthase C terminal domain KM400_01485 PF02540 NAD synthase KM400_01490 PF00860 Permease family KM400_01495 PF00072 Response regulator receiver domain KM400_01495 PF00486 Transcriptional regulatory protein, C terminal KM400_01500 PF16736 Single Cache-like KM400_01500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_01500 PF00512 His Kinase A (phospho-acceptor) domain KM400_01500 PF00989 PAS fold KM400_01520 PF02673 Bacitracin resistance protein BacA KM400_01530 PF00005 ABC transporter KM400_01535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_01535 PF00512 His Kinase A (phospho-acceptor) domain KM400_01540 PF00072 Response regulator receiver domain KM400_01540 PF00486 Transcriptional regulatory protein, C terminal KM400_01560 PF00731 AIR carboxylase KM400_01565 PF02222 ATP-grasp domain KM400_01565 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KM400_01570 PF00206 Lyase KM400_01570 PF10397 Adenylosuccinate lyase C-terminus KM400_01575 PF01259 SAICAR synthetase KM400_01580 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase KM400_01590 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KM400_01590 PF00586 AIR synthase related protein, N-terminal domain KM400_01590 PF02769 AIR synthase related protein, C-terminal domain KM400_01595 PF00156 Phosphoribosyl transferase domain KM400_01600 PF02769 AIR synthase related protein, C-terminal domain KM400_01600 PF00586 AIR synthase related protein, N-terminal domain KM400_01605 PF00551 Formyl transferase KM400_01610 PF02142 MGS-like domain KM400_01610 PF01808 AICARFT/IMPCHase bienzyme KM400_01615 PF02844 Phosphoribosylglycinamide synthetase, N domain KM400_01615 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KM400_01615 PF02843 Phosphoribosylglycinamide synthetase, C domain KM400_01635 PF01884 PcrB family KM400_01640 PF00580 UvrD/REP helicase N-terminal domain KM400_01640 PF13361 UvrD-like helicase C-terminal domain KM400_01645 PF12826 Helix-hairpin-helix motif KM400_01645 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KM400_01645 PF03120 NAD-dependent DNA ligase OB-fold domain KM400_01645 PF01653 NAD-dependent DNA ligase adenylation domain KM400_01645 PF00533 BRCA1 C Terminus (BRCT) domain KM400_01650 PF07537 CamS sex pheromone cAM373 precursor KM400_01655 PF01925 Sulfite exporter TauE/SafE KM400_01660 PF00171 Aldehyde dehydrogenase family KM400_01670 PF00857 Isochorismatase family KM400_01675 PF00005 ABC transporter KM400_01675 PF09383 NIL domain KM400_01680 PF00528 Binding-protein-dependent transport system inner membrane component KM400_01685 PF03180 NLPA lipoprotein KM400_01705 PF01047 MarR family KM400_01715 PF02686 Glu-tRNAGln amidotransferase C subunit KM400_01720 PF01425 Amidase KM400_01725 PF02934 GatB/GatE catalytic domain KM400_01725 PF02637 GatB domain KM400_01730 PF00781 Diacylglycerol kinase catalytic domain KM400_01735 PF13419 Haloacid dehalogenase-like hydrolase KM400_01740 PF00202 Aminotransferase class-III KM400_01745 PF00158 Sigma-54 interaction domain KM400_01750 PF00171 Aldehyde dehydrogenase family KM400_01755 PF00893 Small Multidrug Resistance protein KM400_01760 PF02073 Thermophilic metalloprotease (M29) KM400_01775 PF07670 Nucleoside recognition KM400_01775 PF07662 Na+ dependent nucleoside transporter C-terminus KM400_01775 PF01773 Na+ dependent nucleoside transporter N-terminus KM400_01780 PF05958 tRNA (Uracil-5-)-methyltransferase KM400_01780 PF01938 TRAM domain KM400_01780 PF02475 Met-10+ like-protein KM400_01785 PF01207 Dihydrouridine synthase (Dus) KM400_01795 PF07308 Protein of unknown function (DUF1456) KM400_01810 PF13378 Enolase C-terminal domain-like KM400_01810 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KM400_01820 PF03553 Na+/H+ antiporter family KM400_01825 PF01546 Peptidase family M20/M25/M40 KM400_01825 PF07687 Peptidase dimerisation domain KM400_01835 PF13192 Thioredoxin domain KM400_01835 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM400_01840 PF00578 AhpC/TSA family KM400_01845 PF01636 Phosphotransferase enzyme family KM400_01850 PF01008 Initiation factor 2 subunit family KM400_01855 PF00596 Class II Aldolase and Adducin N-terminal domain KM400_01860 PF01032 FecCD transport family KM400_01865 PF01032 FecCD transport family KM400_01870 PF01497 Periplasmic binding protein KM400_01875 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM400_01885 PF12728 Helix-turn-helix domain KM400_01920 PF13426 PAS domain KM400_01920 PF13188 PAS domain KM400_01920 PF00989 PAS fold KM400_01920 PF00512 His Kinase A (phospho-acceptor) domain KM400_01920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_01940 PF10127 RNA repair pathway DNA polymerase beta family KM400_01945 PF07690 Major Facilitator Superfamily KM400_01950 PF00355 Rieske [2Fe-2S] domain KM400_01950 PF01266 FAD dependent oxidoreductase KM400_01960 PF00528 Binding-protein-dependent transport system inner membrane component KM400_01965 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM400_01970 PF00005 ABC transporter KM400_01975 PF12729 Four helix bundle sensory module for signal transduction KM400_01975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM400_01975 PF00672 HAMP domain KM400_01980 PF12729 Four helix bundle sensory module for signal transduction KM400_01980 PF00672 HAMP domain KM400_01980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM400_01985 PF16657 Maltogenic Amylase, C-terminal domain KM400_01985 PF00128 Alpha amylase, catalytic domain KM400_01990 PF02378 Phosphotransferase system, EIIC KM400_01990 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KM400_01990 PF00367 phosphotransferase system, EIIB KM400_01995 PF03372 Endonuclease/Exonuclease/phosphatase family KM400_02000 PF01061 ABC-2 type transporter KM400_02005 PF01751 Toprim domain KM400_02005 PF01131 DNA topoisomerase KM400_02010 PF02110 Hydroxyethylthiazole kinase family KM400_02015 PF02581 Thiamine monophosphate synthase KM400_02020 PF03605 Anaerobic c4-dicarboxylate membrane transporter KM400_02025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM400_02025 PF00672 HAMP domain KM400_02030 PF01910 Thiamine-binding protein KM400_02035 PF00528 Binding-protein-dependent transport system inner membrane component KM400_02045 PF00005 ABC transporter KM400_02050 PF00005 ABC transporter KM400_02050 PF12848 ABC transporter KM400_02075 PF08360 QacR-like protein, C-terminal region KM400_02075 PF00440 Bacterial regulatory proteins, tetR family KM400_02095 PF11700 Vacuole effluxer Atg22 like KM400_02110 PF03129 Anticodon binding domain KM400_02110 PF09180 Prolyl-tRNA synthetase, C-terminal KM400_02110 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM400_02120 PF00480 ROK family KM400_02125 PF02342 TerD domain KM400_02130 PF02342 TerD domain KM400_02135 PF02342 TerD domain KM400_02140 PF03741 Integral membrane protein TerC family KM400_02145 PF14266 Putative component of 'biosynthetic module' KM400_02150 PF05816 Toxic anion resistance protein (TelA) KM400_02155 PF00689 Cation transporting ATPase, C-terminus KM400_02155 PF00690 Cation transporter/ATPase, N-terminus KM400_02160 PF06569 Protein of unknown function (DUF1128) KM400_02165 PF01451 Low molecular weight phosphotyrosine protein phosphatase KM400_02175 PF03631 Virulence factor BrkB KM400_02185 PF00892 EamA-like transporter family KM400_02205 PF09335 SNARE associated Golgi protein KM400_02220 PF16242 Pyridoxamine 5'-phosphate oxidase like KM400_02225 PF01699 Sodium/calcium exchanger protein KM400_02230 PF14167 YfkD-like protein KM400_02235 PF04055 Radical SAM superfamily KM400_02235 PF08756 YfkB-like domain KM400_02245 PF05683 Fumarase C-terminus KM400_02245 PF05681 Fumarate hydratase (Fumerase) KM400_02250 PF01522 Polysaccharide deacetylase KM400_02260 PF00730 HhH-GPD superfamily base excision DNA repair protein KM400_02265 PF05958 tRNA (Uracil-5-)-methyltransferase KM400_02265 PF01938 TRAM domain KM400_02270 PF00589 Phage integrase family KM400_02270 PF14659 Phage integrase, N-terminal SAM-like domain KM400_02280 PF01381 Helix-turn-helix KM400_02295 PF01381 Helix-turn-helix KM400_02330 PF01695 IstB-like ATP binding protein KM400_02330 PF07319 Primosomal protein DnaI N-terminus KM400_02550 PF01183 Glycosyl hydrolases family 25 KM400_02560 PF01416 tRNA pseudouridine synthase KM400_02570 PF02954 Bacterial regulatory protein, Fis family KM400_02570 PF13426 PAS domain KM400_02570 PF00158 Sigma-54 interaction domain KM400_02580 PF00324 Amino acid permease KM400_02585 PF01546 Peptidase family M20/M25/M40 KM400_02585 PF07687 Peptidase dimerisation domain KM400_02610 PF04960 Glutaminase KM400_02615 PF02378 Phosphotransferase system, EIIC KM400_02615 PF00367 phosphotransferase system, EIIB KM400_02620 PF00144 Beta-lactamase KM400_02635 PF00535 Glycosyl transferase family 2 KM400_02640 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM400_02640 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM400_02640 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM400_02645 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM400_02645 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM400_02645 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM400_02650 PF01370 NAD dependent epimerase/dehydratase family KM400_02650 PF02911 Formyl transferase, C-terminal domain KM400_02650 PF00551 Formyl transferase KM400_02655 PF00535 Glycosyl transferase family 2 KM400_02665 PF01228 Glycine radical KM400_02665 PF02901 Pyruvate formate lyase-like KM400_02670 PF04055 Radical SAM superfamily KM400_02675 PF04101 Glycosyltransferase family 28 C-terminal domain KM400_02675 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase KM400_02690 PF01979 Amidohydrolase family KM400_02695 PF01370 NAD dependent epimerase/dehydratase family KM400_02695 PF08338 Domain of unknown function (DUF1731) KM400_02700 PF02631 RecX family KM400_02715 PF08176 Small acid-soluble spore protein K family KM400_02720 PF14043 WVELL protein KM400_02725 PF04307 LexA-binding, inner membrane-associated putative hydrolase KM400_02730 PF00730 HhH-GPD superfamily base excision DNA repair protein KM400_02730 PF14815 NUDIX domain KM400_02740 PF04259 Small, acid-soluble spore protein, gamma-type KM400_02745 PF14182 YgaB-like protein KM400_02750 PF04167 Protein of unknown function (DUF402) KM400_02755 PF00005 ABC transporter KM400_02755 PF00664 ABC transporter transmembrane region KM400_02760 PF06081 Aromatic acid exporter family member 1 KM400_02765 PF00310 Glutamine amidotransferases class-II KM400_02765 PF04898 Glutamate synthase central domain KM400_02765 PF01645 Conserved region in glutamate synthase KM400_02765 PF01493 GXGXG motif KM400_02770 PF00202 Aminotransferase class-III KM400_02775 PF00005 ABC transporter KM400_02790 PF07885 Ion channel KM400_02795 PF00578 AhpC/TSA family KM400_02800 PF01475 Ferric uptake regulator family KM400_02805 PF11023 Zinc-ribbon containing domain KM400_02905 PF01709 Transcriptional regulator KM400_02910 PF00293 NUDIX domain KM400_02910 PF13344 Haloacid dehalogenase-like hydrolase KM400_02915 PF00912 Transglycosylase KM400_02915 PF00905 Penicillin binding protein transpeptidase domain KM400_02920 PF13462 Thioredoxin KM400_02930 PF08331 Domain of unknown function (DUF1730) KM400_02935 PF12671 Putative amidase domain KM400_02940 PF00588 SpoU rRNA Methylase family KM400_02945 PF00563 EAL domain KM400_02945 PF00990 Diguanylate cyclase, GGDEF domain KM400_02945 PF03707 Bacterial signalling protein N terminal repeat KM400_02950 PF08298 PrkA AAA domain KM400_02950 PF06798 PrkA serine protein kinase C-terminal domain KM400_02955 PF04285 Protein of unknown function (DUF444) KM400_02970 PF02028 BCCT, betaine/carnitine/choline family transporter KM400_02975 PF08453 Peptidase family M9 N-terminal KM400_02975 PF01752 Collagenase KM400_02975 PF18496 Collagenase G catalytic helper subdomain KM400_02985 PF15975 Flotillin KM400_02985 PF01145 SPFH domain / Band 7 family KM400_02990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM400_02990 PF02743 Cache domain KM400_02990 PF00672 HAMP domain KM400_02995 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KM400_02995 PF17203 Single cache domain 3 KM400_02995 PF00989 PAS fold KM400_02995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_03000 PF00072 Response regulator receiver domain KM400_03000 PF08279 HTH domain KM400_03000 PF12431 Transcriptional regulator KM400_03005 PF03600 Citrate transporter KM400_03025 PF04309 Glycerol-3-phosphate responsive antiterminator KM400_03030 PF00005 ABC transporter KM400_03030 PF17912 MalK OB fold domain KM400_03035 PF00528 Binding-protein-dependent transport system inner membrane component KM400_03040 PF00528 Binding-protein-dependent transport system inner membrane component KM400_03045 PF13416 Bacterial extracellular solute-binding protein KM400_03050 PF00149 Calcineurin-like phosphoesterase KM400_03055 PF00072 Response regulator receiver domain KM400_03055 PF00486 Transcriptional regulatory protein, C terminal KM400_03060 PF00512 His Kinase A (phospho-acceptor) domain KM400_03060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_03070 PF13529 Peptidase_C39 like family KM400_03075 PF02743 Cache domain KM400_03075 PF00672 HAMP domain KM400_03075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM400_03080 PF00989 PAS fold KM400_03080 PF17203 Single cache domain 3 KM400_03080 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KM400_03080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_03085 PF00072 Response regulator receiver domain KM400_03090 PF03390 2-hydroxycarboxylate transporter family KM400_03095 PF00390 Malic enzyme, N-terminal domain KM400_03095 PF03949 Malic enzyme, NAD binding domain KM400_03105 PF00892 EamA-like transporter family KM400_03110 PF00392 Bacterial regulatory proteins, gntR family KM400_03110 PF00155 Aminotransferase class I and II KM400_03120 PF00512 His Kinase A (phospho-acceptor) domain KM400_03120 PF00989 PAS fold KM400_03120 PF18698 Histidine kinase sensor domain KM400_03120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_03120 PF00672 HAMP domain KM400_03125 PF00486 Transcriptional regulatory protein, C terminal KM400_03125 PF00072 Response regulator receiver domain KM400_03130 PF00583 Acetyltransferase (GNAT) family KM400_03130 PF13508 Acetyltransferase (GNAT) domain KM400_03135 PF02634 FdhD/NarQ family KM400_03140 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KM400_03140 PF01568 Molydopterin dinucleotide binding domain KM400_03140 PF00037 4Fe-4S binding domain KM400_03140 PF00384 Molybdopterin oxidoreductase KM400_03140 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KM400_03145 PF07849 Protein of unknown function (DUF1641) KM400_03155 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KM400_03155 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KM400_03160 PF13520 Amino acid permease KM400_03165 PF01022 Bacterial regulatory protein, arsR family KM400_03170 PF00403 Heavy-metal-associated domain KM400_03175 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KM400_03175 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KM400_03175 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain KM400_03190 PF07504 Fungalysin/Thermolysin Propeptide Motif KM400_03190 PF03413 Peptidase propeptide and YPEB domain KM400_03190 PF02868 Thermolysin metallopeptidase, alpha-helical domain KM400_03190 PF01447 Thermolysin metallopeptidase, catalytic domain KM400_03210 PF04294 VanW like protein KM400_03215 PF03816 Cell envelope-related transcriptional attenuator domain KM400_03220 PF01773 Na+ dependent nucleoside transporter N-terminus KM400_03220 PF07662 Na+ dependent nucleoside transporter C-terminus KM400_03225 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM400_03230 PF00571 CBS domain KM400_03230 PF03471 Transporter associated domain KM400_03230 PF01595 Cyclin M transmembrane N-terminal domain KM400_03235 PF10415 Fumarase C C-terminus KM400_03235 PF00206 Lyase KM400_03240 PF02652 L-lactate permease KM400_03245 PF01022 Bacterial regulatory protein, arsR family KM400_03250 PF08141 Small acid-soluble spore protein H family KM400_03255 PF00854 POT family KM400_03260 PF01497 Periplasmic binding protein KM400_03265 PF01032 FecCD transport family KM400_03270 PF01032 FecCD transport family KM400_03275 PF00005 ABC transporter KM400_03280 PF08241 Methyltransferase domain KM400_03285 PF00155 Aminotransferase class I and II KM400_03290 PF01370 NAD dependent epimerase/dehydratase family KM400_03295 PF00293 NUDIX domain KM400_03295 PF13344 Haloacid dehalogenase-like hydrolase KM400_03300 PF00092 von Willebrand factor type A domain KM400_03305 PF07728 AAA domain (dynein-related subfamily) KM400_03310 PF13396 Phospholipase_D-nuclease N-terminal KM400_03310 PF13091 PLD-like domain KM400_03325 PF00563 EAL domain KM400_03325 PF00990 Diguanylate cyclase, GGDEF domain KM400_03325 PF03707 Bacterial signalling protein N terminal repeat KM400_03330 PF13520 Amino acid permease KM400_03335 PF07702 UTRA domain KM400_03335 PF00392 Bacterial regulatory proteins, gntR family KM400_03340 PF00367 phosphotransferase system, EIIB KM400_03340 PF02378 Phosphotransferase system, EIIC KM400_03345 PF00128 Alpha amylase, catalytic domain KM400_03345 PF16657 Maltogenic Amylase, C-terminal domain KM400_03360 PF03323 Bacillus/Clostridium GerA spore germination protein KM400_03370 PF01636 Phosphotransferase enzyme family KM400_03375 PF01235 Sodium:alanine symporter family KM400_03380 PF00005 ABC transporter KM400_03385 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM400_03390 PF00528 Binding-protein-dependent transport system inner membrane component KM400_03395 PF00528 Binding-protein-dependent transport system inner membrane component KM400_03400 PF00324 Amino acid permease KM400_03425 PF08279 HTH domain KM400_03425 PF13280 WYL domain KM400_03430 PF01872 RibD C-terminal domain KM400_03435 PF18698 Histidine kinase sensor domain KM400_03435 PF00512 His Kinase A (phospho-acceptor) domain KM400_03435 PF00672 HAMP domain KM400_03435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_03435 PF00989 PAS fold KM400_03440 PF00072 Response regulator receiver domain KM400_03440 PF00486 Transcriptional regulatory protein, C terminal KM400_03450 PF01740 STAS domain KM400_03450 PF00916 Sulfate permease family KM400_03455 PF00582 Universal stress protein family KM400_03465 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM400_03470 PF00528 Binding-protein-dependent transport system inner membrane component KM400_03475 PF00528 Binding-protein-dependent transport system inner membrane component KM400_03480 PF00005 ABC transporter KM400_03480 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM400_03485 PF00005 ABC transporter KM400_03485 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM400_03490 PF07690 Major Facilitator Superfamily KM400_03495 PF01047 MarR family KM400_03505 PF00356 Bacterial regulatory proteins, lacI family KM400_03510 PF00294 pfkB family carbohydrate kinase KM400_03515 PF05025 RbsD / FucU transport protein family KM400_03520 PF00005 ABC transporter KM400_03525 PF02653 Branched-chain amino acid transport system / permease component KM400_03530 PF13407 Periplasmic binding protein domain KM400_03535 PF00923 Transaldolase/Fructose-6-phosphate aldolase KM400_03540 PF05547 Immune inhibitor A peptidase M6 KM400_03555 PF08240 Alcohol dehydrogenase GroES-like domain KM400_03555 PF00107 Zinc-binding dehydrogenase KM400_03565 PF00882 Zinc dependent phospholipase C KM400_03570 PF03372 Endonuclease/Exonuclease/phosphatase family KM400_03595 PF02673 Bacitracin resistance protein BacA KM400_03600 PF00672 HAMP domain KM400_03600 PF02743 Cache domain KM400_03600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM400_03605 PF01476 LysM domain KM400_03605 PF06725 3D domain KM400_03610 PF01381 Helix-turn-helix KM400_03620 PF04203 Sortase domain KM400_03625 PF00854 POT family KM400_03630 PF05525 Branched-chain amino acid transport protein KM400_03645 PF00324 Amino acid permease KM400_03650 PF00860 Permease family KM400_03675 PF00999 Sodium/hydrogen exchanger family KM400_03675 PF02080 TrkA-C domain KM400_03675 PF02254 TrkA-N domain KM400_03685 PF00510 Cytochrome c oxidase subunit III KM400_03690 PF00115 Cytochrome C and Quinol oxidase polypeptide I KM400_03695 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KM400_03700 PF00324 Amino acid permease KM400_03705 PF13529 Peptidase_C39 like family KM400_03710 PF01546 Peptidase family M20/M25/M40 KM400_03710 PF07687 Peptidase dimerisation domain KM400_03715 PF11755 Protein of unknown function (DUF3311) KM400_03720 PF00474 Sodium:solute symporter family KM400_03725 PF03323 Bacillus/Clostridium GerA spore germination protein KM400_03730 PF03845 Spore germination protein KM400_03735 PF05504 Spore germination B3/ GerAC like, C-terminal KM400_03740 PF07670 Nucleoside recognition KM400_03740 PF07664 Ferrous iron transport protein B C terminus KM400_03740 PF17910 FeoB cytosolic helical domain KM400_03740 PF02421 Ferrous iron transport protein B KM400_03745 PF07664 Ferrous iron transport protein B C terminus KM400_03745 PF02421 Ferrous iron transport protein B KM400_03745 PF07670 Nucleoside recognition KM400_03745 PF17910 FeoB cytosolic helical domain KM400_03750 PF17910 FeoB cytosolic helical domain KM400_03750 PF07664 Ferrous iron transport protein B C terminus KM400_03750 PF04023 FeoA domain KM400_03750 PF07670 Nucleoside recognition KM400_03750 PF02421 Ferrous iron transport protein B KM400_03755 PF12849 PBP superfamily domain KM400_03760 PF00528 Binding-protein-dependent transport system inner membrane component KM400_03765 PF00528 Binding-protein-dependent transport system inner membrane component KM400_03775 PF00873 AcrB/AcrD/AcrF family KM400_03895 PF00571 CBS domain KM400_03910 PF00246 Zinc carboxypeptidase KM400_03910 PF08239 Bacterial SH3 domain KM400_03915 PF03070 TENA/THI-4/PQQC family KM400_03920 PF00005 ABC transporter KM400_03925 PF00528 Binding-protein-dependent transport system inner membrane component KM400_03930 PF09084 NMT1/THI5 like KM400_03935 PF02581 Thiamine monophosphate synthase KM400_03940 PF01266 FAD dependent oxidoreductase KM400_03945 PF02597 ThiS family KM400_03950 PF05690 Thiazole biosynthesis protein ThiG KM400_03955 PF00899 ThiF family KM400_03960 PF08543 Phosphomethylpyrimidine kinase KM400_03985 PF03814 Potassium-transporting ATPase A subunit KM400_03995 PF02669 K+-transporting ATPase, c chain KM400_04000 PF02702 Osmosensitive K+ channel His kinase sensor domain KM400_04005 PF07690 Major Facilitator Superfamily KM400_04010 PF01047 MarR family KM400_04025 PF00860 Permease family KM400_04035 PF03734 L,D-transpeptidase catalytic domain KM400_04035 PF17969 L,D-transpeptidase C-terminal domain KM400_04045 PF00294 pfkB family carbohydrate kinase KM400_04050 PF00251 Glycosyl hydrolases family 32 N-terminal domain KM400_04050 PF08244 Glycosyl hydrolases family 32 C terminal KM400_04055 PF02378 Phosphotransferase system, EIIC KM400_04055 PF00367 phosphotransferase system, EIIB KM400_04060 PF13407 Periplasmic binding protein domain KM400_04060 PF00356 Bacterial regulatory proteins, lacI family KM400_04070 PF00085 Thioredoxin KM400_04075 PF02600 Disulfide bond formation protein DsbB KM400_04080 PF14148 YhdB-like protein KM400_04100 PF03323 Bacillus/Clostridium GerA spore germination protein KM400_04110 PF00881 Nitroreductase family KM400_04115 PF04293 SpoVR like protein KM400_04140 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM400_04140 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM400_04145 PF02583 Metal-sensitive transcriptional repressor KM400_04150 PF00581 Rhodanese-like domain KM400_04150 PF01206 Sulfurtransferase TusA KM400_04155 PF00753 Metallo-beta-lactamase superfamily KM400_04155 PF00581 Rhodanese-like domain KM400_04160 PF01206 Sulfurtransferase TusA KM400_04165 PF00581 Rhodanese-like domain KM400_04175 PF13686 DsrE/DsrF/DrsH-like family KM400_04180 PF01925 Sulfite exporter TauE/SafE KM400_04190 PF03816 Cell envelope-related transcriptional attenuator domain KM400_04195 PF08240 Alcohol dehydrogenase GroES-like domain KM400_04195 PF00107 Zinc-binding dehydrogenase KM400_04200 PF02690 Na+/Pi-cotransporter KM400_04205 PF07690 Major Facilitator Superfamily KM400_04215 PF05043 Mga helix-turn-helix domain KM400_04215 PF08279 HTH domain KM400_04215 PF00874 PRD domain KM400_04215 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KM400_04220 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KM400_04225 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KM400_04230 PF02378 Phosphotransferase system, EIIC KM400_04245 PF01476 LysM domain KM400_04245 PF06725 3D domain KM400_04250 PF02687 FtsX-like permease family KM400_04250 PF12704 MacB-like periplasmic core domain KM400_04255 PF00005 ABC transporter KM400_04265 PF09529 Integral membrane protein (intg_mem_TP0381) KM400_04280 PF05525 Branched-chain amino acid transport protein KM400_04285 PF05067 Manganese containing catalase KM400_04290 PF12652 CotJB protein KM400_04295 PF11007 Spore coat associated protein JA (CotJA) KM400_04310 PF02735 Ku70/Ku80 beta-barrel domain KM400_04320 PF09335 SNARE associated Golgi protein KM400_04355 PF13520 Amino acid permease KM400_04360 PF00999 Sodium/hydrogen exchanger family KM400_04370 PF01418 Helix-turn-helix domain, rpiR family KM400_04370 PF01380 SIS domain KM400_04375 PF01380 SIS domain KM400_04380 PF02378 Phosphotransferase system, EIIC KM400_04380 PF00367 phosphotransferase system, EIIB KM400_04390 PF07681 DoxX KM400_04405 PF00892 EamA-like transporter family KM400_04410 PF01037 Lrp/AsnC ligand binding domain KM400_04420 PF00893 Small Multidrug Resistance protein KM400_04425 PF00893 Small Multidrug Resistance protein KM400_04430 PF17934 Tetracyclin repressor-like, C-terminal domain KM400_04430 PF00440 Bacterial regulatory proteins, tetR family KM400_04435 PF07690 Major Facilitator Superfamily KM400_04440 PF01638 HxlR-like helix-turn-helix KM400_04450 PF02525 Flavodoxin-like fold KM400_04455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM400_04455 PF12793 Sugar transport-related sRNA regulator N-term KM400_04460 PF07690 Major Facilitator Superfamily KM400_04470 PF01965 DJ-1/PfpI family KM400_04475 PF06628 Catalase-related immune-responsive KM400_04475 PF00199 Catalase KM400_04475 PF18011 C-terminal domain found in long catalases KM400_04485 PF13520 Amino acid permease KM400_04490 PF01177 Asp/Glu/Hydantoin racemase KM400_04500 PF00171 Aldehyde dehydrogenase family KM400_04505 PF00664 ABC transporter transmembrane region KM400_04505 PF00005 ABC transporter KM400_04515 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM400_04520 PF00528 Binding-protein-dependent transport system inner membrane component KM400_04525 PF00005 ABC transporter KM400_04530 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM400_04540 PF14398 YheC/D like ATP-grasp KM400_04550 PF04286 Protein of unknown function (DUF445) KM400_04555 PF06133 Control of competence regulator ComK, YlbF/YmcA KM400_04570 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM400_04570 PF00205 Thiamine pyrophosphate enzyme, central domain KM400_04570 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM400_04575 PF03306 Alpha-acetolactate decarboxylase KM400_04585 PF02245 Methylpurine-DNA glycosylase (MPG) KM400_04605 PF04055 Radical SAM superfamily KM400_04610 PF13193 AMP-binding enzyme C-terminal domain KM400_04610 PF00501 AMP-binding enzyme KM400_04620 PF01740 STAS domain KM400_04620 PF00916 Sulfate permease family KM400_04640 PF07517 SecA DEAD-like domain KM400_04640 PF01043 SecA preprotein cross-linking domain KM400_04640 PF07516 SecA Wing and Scaffold domain KM400_04645 PF01943 Polysaccharide biosynthesis protein KM400_04645 PF14667 Polysaccharide biosynthesis C-terminal domain KM400_04655 PF00395 S-layer homology domain KM400_04655 PF02368 Bacterial Ig-like domain (group 2) KM400_04655 PF13205 Bacterial Ig-like domain KM400_04660 PF00395 S-layer homology domain KM400_04670 PF03062 MBOAT, membrane-bound O-acyltransferase family KM400_04675 PF03062 MBOAT, membrane-bound O-acyltransferase family KM400_04690 PF00378 Enoyl-CoA hydratase/isomerase KM400_04705 PF05343 M42 glutamyl aminopeptidase KM400_04710 PF01520 N-acetylmuramoyl-L-alanine amidase KM400_04710 PF00395 S-layer homology domain KM400_04720 PF11121 Protein of unknown function (DUF2639) KM400_04725 PF05544 Proline racemase KM400_04730 PF02423 Ornithine cyclodeaminase/mu-crystallin family KM400_04760 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM400_04765 PF00528 Binding-protein-dependent transport system inner membrane component KM400_04770 PF00528 Binding-protein-dependent transport system inner membrane component KM400_04770 PF12911 N-terminal TM domain of oligopeptide transport permease C KM400_04780 PF00005 ABC transporter KM400_04780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM400_04785 PF01541 GIY-YIG catalytic domain KM400_04815 PF00083 Sugar (and other) transporter KM400_04820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_04820 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KM400_04825 PF00072 Response regulator receiver domain KM400_04825 PF08279 HTH domain KM400_04825 PF12431 Transcriptional regulator KM400_04830 PF03401 Tripartite tricarboxylate transporter family receptor KM400_04835 PF02342 TerD domain KM400_04860 PF13411 MerR HTH family regulatory protein KM400_04860 PF06445 GyrI-like small molecule binding domain KM400_04875 PF00772 DnaB-like helicase N terminal domain KM400_04875 PF03796 DnaB-like helicase C terminal domain KM400_04900 PF01925 Sulfite exporter TauE/SafE KM400_04915 PF07690 Major Facilitator Superfamily KM400_04965 PF00440 Bacterial regulatory proteins, tetR family KM400_04965 PF18665 Tetracyclin repressor-like, C-terminal domain KM400_04985 PF01066 CDP-alcohol phosphatidyltransferase KM400_05005 PF02733 Dak1 domain KM400_05015 PF02733 Dak1 domain KM400_05020 PF02525 Flavodoxin-like fold KM400_05025 PF02082 Transcriptional regulator KM400_05055 PF00672 HAMP domain KM400_05055 PF01966 HD domain KM400_05075 PF00395 S-layer homology domain KM400_05100 PF11181 Heat induced stress protein YflT KM400_05105 PF05532 CsbD-like KM400_05120 PF01740 STAS domain KM400_05125 PF13581 Histidine kinase-like ATPase domain KM400_05130 PF04542 Sigma-70 region 2 KM400_05130 PF04539 Sigma-70 region 3 KM400_05130 PF04545 Sigma-70, region 4 KM400_05140 PF07228 Stage II sporulation protein E (SpoIIE) KM400_05140 PF13426 PAS domain KM400_05145 PF01739 CheR methyltransferase, SAM binding domain KM400_05145 PF03705 CheR methyltransferase, all-alpha domain KM400_05150 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM400_05150 PF01627 Hpt domain KM400_05150 PF00512 His Kinase A (phospho-acceptor) domain KM400_05150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_05150 PF00072 Response regulator receiver domain KM400_05175 PF01906 Putative heavy-metal-binding KM400_05185 PF08240 Alcohol dehydrogenase GroES-like domain KM400_05185 PF00107 Zinc-binding dehydrogenase KM400_05190 PF11121 Protein of unknown function (DUF2639) KM400_05205 PF00149 Calcineurin-like phosphoesterase KM400_05210 PF13514 AAA domain KM400_05215 PF12323 Helix-turn-helix domain KM400_05215 PF01385 Probable transposase KM400_05215 PF07282 Putative transposase DNA-binding domain KM400_05225 PF01336 OB-fold nucleic acid binding domain KM400_05225 PF01966 HD domain KM400_05230 PF00440 Bacterial regulatory proteins, tetR family KM400_05235 PF07690 Major Facilitator Superfamily KM400_05240 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM400_05245 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM400_05250 PF18801 response regulator aspartate phosphatase H, N terminal KM400_05255 PF00561 alpha/beta hydrolase fold KM400_05255 PF08386 TAP-like protein KM400_05275 PF04309 Glycerol-3-phosphate responsive antiterminator KM400_05280 PF00230 Major intrinsic protein KM400_05285 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM400_05285 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM400_05290 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KM400_05290 PF01266 FAD dependent oxidoreductase KM400_05305 PF04542 Sigma-70 region 2 KM400_05305 PF08281 Sigma-70, region 4 KM400_05330 PF07690 Major Facilitator Superfamily KM400_05335 PF07690 Major Facilitator Superfamily KM400_05345 PF13538 UvrD-like helicase C-terminal domain KM400_05365 PF01047 MarR family KM400_05370 PF12732 YtxH-like protein KM400_05375 PF01230 HIT domain KM400_05380 PF00005 ABC transporter KM400_05385 PF05975 Bacterial ABC transporter protein EcsB KM400_05390 PF12787 EcsC protein family KM400_05400 PF17934 Tetracyclin repressor-like, C-terminal domain KM400_05400 PF00440 Bacterial regulatory proteins, tetR family KM400_05410 PF03703 Bacterial PH domain KM400_05455 PF03703 Bacterial PH domain KM400_05460 PF03703 Bacterial PH domain KM400_05465 PF03992 Antibiotic biosynthesis monooxygenase KM400_05470 PF00912 Transglycosylase KM400_05470 PF00905 Penicillin binding protein transpeptidase domain KM400_05475 PF01208 Uroporphyrinogen decarboxylase (URO-D) KM400_05480 PF00762 Ferrochelatase KM400_05485 PF01593 Flavin containing amine oxidoreductase KM400_05510 PF03965 Penicillinase repressor KM400_05520 PF17932 Tetracyclin repressor-like, C-terminal domain KM400_05520 PF00440 Bacterial regulatory proteins, tetR family KM400_05550 PF00356 Bacterial regulatory proteins, lacI family KM400_05555 PF14149 YhfH-like protein KM400_05560 PF12706 Beta-lactamase superfamily domain KM400_05565 PF03099 Biotin/lipoate A/B protein ligase family KM400_05565 PF10437 Bacterial lipoate protein ligase C-terminus KM400_05575 PF00501 AMP-binding enzyme KM400_05575 PF13193 AMP-binding enzyme C-terminal domain KM400_05585 PF01520 N-acetylmuramoyl-L-alanine amidase KM400_05585 PF00395 S-layer homology domain KM400_05590 PF05593 RHS Repeat KM400_05605 PF05593 RHS Repeat KM400_05645 PF01966 HD domain KM400_05655 PF08281 Sigma-70, region 4 KM400_05655 PF04542 Sigma-70 region 2 KM400_05660 PF06445 GyrI-like small molecule binding domain KM400_05660 PF12833 Helix-turn-helix domain KM400_05675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_05675 PF00512 His Kinase A (phospho-acceptor) domain KM400_05680 PF00486 Transcriptional regulatory protein, C terminal KM400_05680 PF00072 Response regulator receiver domain KM400_05705 PF16491 CAAX prenyl protease N-terminal, five membrane helices KM400_05705 PF01435 Peptidase family M48 KM400_05710 PF00672 HAMP domain KM400_05710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM400_05710 PF02743 Cache domain KM400_05715 PF00892 EamA-like transporter family KM400_05720 PF03424 Carbohydrate binding domain (family 17/28) KM400_05720 PF00395 S-layer homology domain KM400_05720 PF00150 Cellulase (glycosyl hydrolase family 5) KM400_05730 PF00395 S-layer homology domain KM400_05735 PF01274 Malate synthase KM400_05740 PF00463 Isocitrate lyase family KM400_05750 PF00313 'Cold-shock' DNA-binding domain KM400_05765 PF06338 ComK protein KM400_05770 PF09335 SNARE associated Golgi protein KM400_05775 PF10502 Signal peptidase, peptidase S26 KM400_05780 PF13361 UvrD-like helicase C-terminal domain KM400_05780 PF12705 PD-(D/E)XK nuclease superfamily KM400_05785 PF00580 UvrD/REP helicase N-terminal domain KM400_05785 PF13361 UvrD-like helicase C-terminal domain KM400_05785 PF12705 PD-(D/E)XK nuclease superfamily KM400_05795 PF10676 Spore germination protein gerPA/gerPF KM400_05800 PF10970 Spore germination protein GerPE KM400_05810 PF10737 Spore germination protein GerPC KM400_05815 PF10803 Spore germination GerPB KM400_05820 PF10676 Spore germination protein gerPA/gerPF KM400_05830 PF01557 Fumarylacetoacetate (FAA) hydrolase family KM400_05840 PF00202 Aminotransferase class-III KM400_05845 PF07457 Protein of unknown function (DUF1516) KM400_05855 PF00733 Asparagine synthase KM400_05855 PF13537 Glutamine amidotransferase domain KM400_05860 PF00762 Ferrochelatase KM400_05865 PF06628 Catalase-related immune-responsive KM400_05865 PF00199 Catalase KM400_05870 PF00909 Ammonium Transporter Family KM400_05875 PF00128 Alpha amylase, catalytic domain KM400_05885 PF04461 Protein of unknown function (DUF520) KM400_05890 PF13509 S1 domain KM400_05890 PF17783 CvfB-like winged helix domain KM400_05900 PF00639 PPIC-type PPIASE domain KM400_05910 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM400_05910 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM400_05915 PF12758 Protein of unknown function (DUF3813) KM400_05930 PF14168 YjzC-like protein KM400_05935 PF00004 ATPase family associated with various cellular activities (AAA) KM400_05935 PF07724 AAA domain (Cdc48 subfamily) KM400_05935 PF10431 C-terminal, D2-small domain, of ClpB protein KM400_05935 PF17871 AAA lid domain KM400_05935 PF02861 Clp amino terminal domain, pathogenicity island component KM400_05955 PF10815 ComZ KM400_05960 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM400_05960 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM400_05965 PF02801 Beta-ketoacyl synthase, C-terminal domain KM400_05965 PF00109 Beta-ketoacyl synthase, N-terminal domain KM400_05970 PF10026 Predicted Zn-dependent protease (DUF2268) KM400_05975 PF12227 Protein of unknown function (DUF3603) KM400_05980 PF00579 tRNA synthetases class I (W and Y) KM400_05990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM400_05995 PF00528 Binding-protein-dependent transport system inner membrane component KM400_06000 PF00528 Binding-protein-dependent transport system inner membrane component KM400_06000 PF12911 N-terminal TM domain of oligopeptide transport permease C KM400_06005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM400_06005 PF00005 ABC transporter KM400_06010 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM400_06010 PF00005 ABC transporter KM400_06015 PF01554 MatE KM400_06020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM400_06030 PF03960 ArsC family KM400_06035 PF03741 Integral membrane protein TerC family KM400_06040 PF05389 Negative regulator of genetic competence (MecA) KM400_06045 PF13091 PLD-like domain KM400_06045 PF13396 Phospholipase_D-nuclease N-terminal KM400_06055 PF01432 Peptidase family M3 KM400_06055 PF08439 Oligopeptidase F KM400_06070 PF01152 Bacterial-like globin KM400_06075 PF01928 CYTH domain KM400_06085 PF04607 Region found in RelA / SpoT proteins KM400_06090 PF01513 ATP-NAD kinase KM400_06095 PF00849 RNA pseudouridylate synthase KM400_06105 PF00149 Calcineurin-like phosphoesterase KM400_06115 PF00535 Glycosyl transferase family 2 KM400_06120 PF08241 Methyltransferase domain KM400_06125 PF05711 Macrocin-O-methyltransferase (TylF) KM400_06155 PF00483 Nucleotidyl transferase KM400_06160 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase KM400_06165 PF16363 GDP-mannose 4,6 dehydratase KM400_06170 PF04321 RmlD substrate binding domain KM400_06190 PF07098 Protein of unknown function (DUF1360) KM400_06210 PF00580 UvrD/REP helicase N-terminal domain KM400_06210 PF13361 UvrD-like helicase C-terminal domain KM400_06215 PF13673 Acetyltransferase (GNAT) domain KM400_06225 PF00756 Putative esterase KM400_06240 PF02368 Bacterial Ig-like domain (group 2) KM400_06245 PF00474 Sodium:solute symporter family KM400_06250 PF04715 Anthranilate synthase component I, N terminal region KM400_06250 PF00425 chorismate binding enzyme KM400_06255 PF02885 Glycosyl transferase family, helical bundle domain KM400_06255 PF00117 Glutamine amidotransferase class-I KM400_06255 PF00591 Glycosyl transferase family, a/b domain KM400_06260 PF00591 Glycosyl transferase family, a/b domain KM400_06260 PF02885 Glycosyl transferase family, helical bundle domain KM400_06265 PF00218 Indole-3-glycerol phosphate synthase KM400_06270 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KM400_06275 PF00291 Pyridoxal-phosphate dependent enzyme KM400_06290 PF02652 L-lactate permease KM400_06295 PF10042 Uncharacterized conserved protein (DUF2278) KM400_06320 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM400_06320 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM400_06350 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM400_06350 PF00364 Biotin-requiring enzyme KM400_06350 PF02817 e3 binding domain KM400_06355 PF00676 Dehydrogenase E1 component KM400_06355 PF16870 2-oxoglutarate dehydrogenase C-terminal KM400_06355 PF02779 Transketolase, pyrimidine binding domain KM400_06360 PF01381 Helix-turn-helix KM400_06420 PF13649 Methyltransferase domain KM400_06430 PF00768 D-alanyl-D-alanine carboxypeptidase KM400_06430 PF07943 Penicillin-binding protein 5, C-terminal domain KM400_06440 PF12389 Camelysin metallo-endopeptidase KM400_06450 PF12389 Camelysin metallo-endopeptidase KM400_06455 PF08671 Anti-repressor SinI KM400_06455 PF01381 Helix-turn-helix KM400_06465 PF05547 Immune inhibitor A peptidase M6 KM400_06470 PF00171 Aldehyde dehydrogenase family KM400_06475 PF08402 TOBE domain KM400_06475 PF00005 ABC transporter KM400_06480 PF00528 Binding-protein-dependent transport system inner membrane component KM400_06485 PF00528 Binding-protein-dependent transport system inner membrane component KM400_06490 PF13416 Bacterial extracellular solute-binding protein KM400_06500 PF03176 MMPL family KM400_06510 PF00849 RNA pseudouridylate synthase KM400_06510 PF01479 S4 domain KM400_06520 PF00188 Cysteine-rich secretory protein family KM400_06525 PF02754 Cysteine-rich domain KM400_06525 PF13183 4Fe-4S dicluster domain KM400_06530 PF02913 FAD linked oxidases, C-terminal domain KM400_06530 PF01565 FAD binding domain KM400_06535 PF05651 Putative sugar diacid recognition KM400_06535 PF17853 GGDEF-like domain KM400_06535 PF13556 PucR C-terminal helix-turn-helix domain KM400_06545 PF00486 Transcriptional regulatory protein, C terminal KM400_06545 PF00072 Response regulator receiver domain KM400_06550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_06550 PF00672 HAMP domain KM400_06550 PF18698 Histidine kinase sensor domain KM400_06550 PF00512 His Kinase A (phospho-acceptor) domain KM400_06550 PF00989 PAS fold KM400_06555 PF07729 FCD domain KM400_06555 PF00392 Bacterial regulatory proteins, gntR family KM400_06560 PF02754 Cysteine-rich domain KM400_06565 PF13183 4Fe-4S dicluster domain KM400_06565 PF02589 LUD domain KM400_06565 PF11870 Domain of unknown function (DUF3390) KM400_06570 PF02589 LUD domain KM400_06575 PF06750 Bacterial Peptidase A24 N-terminal domain KM400_06575 PF01478 Type IV leader peptidase family KM400_06585 PF01226 Formate/nitrite transporter KM400_06590 PF03741 Integral membrane protein TerC family KM400_06600 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM400_06605 PF01575 MaoC like domain KM400_06630 PF00561 alpha/beta hydrolase fold KM400_06635 PF01266 FAD dependent oxidoreductase KM400_06640 PF02386 Cation transport protein KM400_06670 PF13419 Haloacid dehalogenase-like hydrolase KM400_06675 PF00266 Aminotransferase class-V KM400_06685 PF08220 DeoR-like helix-turn-helix domain KM400_06685 PF00455 DeoR C terminal sensor domain KM400_06705 PF04748 Divergent polysaccharide deacetylase KM400_06710 PF09388 Spo0E like sporulation regulatory protein KM400_06715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_06715 PF00512 His Kinase A (phospho-acceptor) domain KM400_06715 PF02743 Cache domain KM400_06720 PF01047 MarR family KM400_06730 PF12867 DinB superfamily KM400_06735 PF13426 PAS domain KM400_06735 PF13188 PAS domain KM400_06735 PF00989 PAS fold KM400_06735 PF00512 His Kinase A (phospho-acceptor) domain KM400_06735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_06740 PF06508 Queuosine biosynthesis protein QueC KM400_06745 PF01242 6-pyruvoyl tetrahydropterin synthase KM400_06750 PF04055 Radical SAM superfamily KM400_06755 PF14489 QueF-like protein KM400_06760 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) KM400_06790 PF07972 NrdI Flavodoxin like KM400_06810 PF00268 Ribonucleotide reductase, small chain KM400_06815 PF00392 Bacterial regulatory proteins, gntR family KM400_06820 PF00005 ABC transporter KM400_06830 PF00005 ABC transporter KM400_06850 PF01037 Lrp/AsnC ligand binding domain KM400_06860 PF00857 Isochorismatase family KM400_06870 PF02016 LD-carboxypeptidase N-terminal domain KM400_06870 PF17676 LD-carboxypeptidase C-terminal domain KM400_06875 PF03060 Nitronate monooxygenase KM400_06880 PF04914 DltD protein KM400_06885 PF00550 Phosphopantetheine attachment site KM400_06890 PF03062 MBOAT, membrane-bound O-acyltransferase family KM400_06895 PF00501 AMP-binding enzyme KM400_06895 PF13193 AMP-binding enzyme C-terminal domain KM400_06905 PF01546 Peptidase family M20/M25/M40 KM400_06905 PF07687 Peptidase dimerisation domain KM400_06915 PF00258 Flavodoxin KM400_06930 PF01636 Phosphotransferase enzyme family KM400_06950 PF01554 MatE KM400_06955 PF02673 Bacitracin resistance protein BacA KM400_06970 PF01047 MarR family KM400_06980 PF00375 Sodium:dicarboxylate symporter family KM400_06995 PF09579 Sporulation protein YtfJ (Spore_YtfJ) KM400_07005 PF03698 Uncharacterised protein family (UPF0180) KM400_07020 PF01063 Amino-transferase class IV KM400_07025 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM400_07025 PF00205 Thiamine pyrophosphate enzyme, central domain KM400_07025 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM400_07030 PF01842 ACT domain KM400_07030 PF10369 Small subunit of acetolactate synthase KM400_07035 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KM400_07035 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KM400_07040 PF00682 HMGL-like KM400_07040 PF08502 LeuA allosteric (dimerisation) domain KM400_07045 PF00180 Isocitrate/isopropylmalate dehydrogenase KM400_07050 PF00330 Aconitase family (aconitate hydratase) KM400_07055 PF00694 Aconitase C-terminal domain KM400_07060 PF13393 Histidyl-tRNA synthetase KM400_07065 PF01634 ATP phosphoribosyltransferase KM400_07070 PF00815 Histidinol dehydrogenase KM400_07075 PF00475 Imidazoleglycerol-phosphate dehydratase KM400_07080 PF00117 Glutamine amidotransferase class-I KM400_07085 PF00977 Histidine biosynthesis protein KM400_07090 PF00977 Histidine biosynthesis protein KM400_07095 PF01502 Phosphoribosyl-AMP cyclohydrolase KM400_07100 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase KM400_07105 PF02811 PHP domain KM400_07115 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KM400_07115 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KM400_07120 PF01066 CDP-alcohol phosphatidyltransferase KM400_07125 PF00884 Sulfatase KM400_07135 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KM400_07135 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KM400_07145 PF01507 Phosphoadenosine phosphosulfate reductase family KM400_07150 PF14306 PUA-like domain KM400_07150 PF01747 ATP-sulfurylase KM400_07160 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KM400_07160 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KM400_07170 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM400_07175 PF01903 CbiX KM400_07185 PF00209 Sodium:neurotransmitter symporter family KM400_07195 PF00375 Sodium:dicarboxylate symporter family KM400_07205 PF03553 Na+/H+ antiporter family KM400_07220 PF09922 Cell wall-active antibiotics response 4TMS YvqF KM400_07225 PF00672 HAMP domain KM400_07225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_07225 PF07730 Histidine kinase KM400_07230 PF00196 Bacterial regulatory proteins, luxR family KM400_07230 PF00072 Response regulator receiver domain KM400_07240 PF05525 Branched-chain amino acid transport protein KM400_07250 PF08241 Methyltransferase domain KM400_07275 PF00175 Oxidoreductase NAD-binding domain KM400_07275 PF00042 Globin KM400_07275 PF00970 Oxidoreductase FAD-binding domain KM400_07290 PF01925 Sulfite exporter TauE/SafE KM400_07295 PF01384 Phosphate transporter family KM400_07300 PF01865 Protein of unknown function DUF47 KM400_07305 PF00912 Transglycosylase KM400_07305 PF00905 Penicillin binding protein transpeptidase domain KM400_07325 PF01904 Protein of unknown function DUF72 KM400_07335 PF00589 Phage integrase family KM400_07340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_07340 PF00512 His Kinase A (phospho-acceptor) domain KM400_07340 PF16736 Single Cache-like KM400_07340 PF00989 PAS fold KM400_07345 PF01048 Phosphorylase superfamily KM400_07360 PF09924 Uncharacterised conserved protein (DUF2156) KM400_07360 PF03706 Lysylphosphatidylglycerol synthase TM region KM400_07375 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KM400_07375 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KM400_07380 PF07943 Penicillin-binding protein 5, C-terminal domain KM400_07380 PF00768 D-alanyl-D-alanine carboxypeptidase KM400_07385 PF07670 Nucleoside recognition KM400_07390 PF07670 Nucleoside recognition KM400_07395 PF00849 RNA pseudouridylate synthase KM400_07395 PF01479 S4 domain KM400_07400 PF00578 AhpC/TSA family KM400_07405 PF05140 ResB-like family KM400_07410 PF01578 Cytochrome C assembly protein KM400_07415 PF00072 Response regulator receiver domain KM400_07415 PF00486 Transcriptional regulatory protein, C terminal KM400_07420 PF00989 PAS fold KM400_07420 PF00672 HAMP domain KM400_07420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_07420 PF00512 His Kinase A (phospho-acceptor) domain KM400_07420 PF18698 Histidine kinase sensor domain KM400_07425 PF01923 Cobalamin adenosyltransferase KM400_07440 PF12822 ECF transporter, substrate-specific component KM400_07450 PF14493 Helix-turn-helix domain KM400_07455 PF00271 Helicase conserved C-terminal domain KM400_07455 PF00270 DEAD/DEAH box helicase KM400_07460 PF02517 CPBP intramembrane metalloprotease KM400_07475 PF02310 B12 binding domain KM400_07475 PF02607 B12 binding domain KM400_07475 PF13411 MerR HTH family regulatory protein KM400_07480 PF05389 Negative regulator of genetic competence (MecA) KM400_07485 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KM400_07485 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KM400_07510 PF00710 Asparaginase, N-terminal KM400_07510 PF17763 Glutaminase/Asparaginase C-terminal domain KM400_07520 PF02224 Cytidylate kinase KM400_07525 PF00575 S1 RNA binding domain KM400_07530 PF01070 FMN-dependent dehydrogenase KM400_07535 PF14140 YpzI-like protein KM400_07545 PF14045 YIEGIA protein KM400_07555 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KM400_07555 PF01926 50S ribosome-binding GTPase KM400_07560 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KM400_07560 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KM400_07570 PF10966 Protein of unknown function (DUF2768) KM400_07580 PF09547 Stage IV sporulation protein A (spore_IV_A) KM400_07585 PF00216 Bacterial DNA-binding protein KM400_07590 PF01227 GTP cyclohydrolase I KM400_07595 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 KM400_07600 PF01209 ubiE/COQ5 methyltransferase family KM400_07605 PF00348 Polyprenyl synthetase KM400_07610 PF00334 Nucleoside diphosphate kinase KM400_07615 PF01264 Chorismate synthase KM400_07620 PF01761 3-dehydroquinate synthase KM400_07625 PF00155 Aminotransferase class I and II KM400_07635 PF08858 IDEAL domain KM400_07635 PF08864 UPF0302 domain KM400_07640 PF10673 Protein of unknown function (DUF2487) KM400_07645 PF00355 Rieske [2Fe-2S] domain KM400_07650 PF00033 Cytochrome b/b6/petB KM400_07655 PF00032 Cytochrome b(C-terminal)/b6/petD KM400_07655 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KM400_07660 PF07187 Protein of unknown function (DUF1405) KM400_07670 PF09577 Sporulation protein YpjB (SpoYpjB) KM400_07675 PF04298 Putative neutral zinc metallopeptidase KM400_07685 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM400_07685 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM400_07690 PF03819 MazG nucleotide pyrophosphohydrolase domain KM400_07695 PF05173 Dihydrodipicolinate reductase, C-terminus KM400_07695 PF01113 Dihydrodipicolinate reductase, N-terminus KM400_07700 PF02142 MGS-like domain KM400_07705 PF02585 GlcNAc-PI de-N-acetylase KM400_07710 PF13439 Glycosyltransferase Family 4 KM400_07710 PF00534 Glycosyl transferases group 1 KM400_07715 PF01743 Poly A polymerase head domain KM400_07715 PF12627 Probable RNA and SrmB- binding site of polymerase A KM400_07715 PF13735 tRNA nucleotidyltransferase domain 2 putative KM400_07720 PF08279 HTH domain KM400_07720 PF02237 Biotin protein ligase C terminal domain KM400_07720 PF03099 Biotin/lipoate A/B protein ligase family KM400_07730 PF02548 Ketopantoate hydroxymethyltransferase KM400_07735 PF02569 Pantoate-beta-alanine ligase KM400_07740 PF02261 Aspartate decarboxylase KM400_07750 PF14084 Protein of unknown function (DUF4264) KM400_07760 PF00155 Aminotransferase class I and II KM400_07765 PF07261 Replication initiation and membrane attachment KM400_07770 PF00633 Helix-hairpin-helix motif KM400_07770 PF00730 HhH-GPD superfamily base excision DNA repair protein KM400_07770 PF10576 Iron-sulfur binding domain of endonuclease III KM400_07780 PF00912 Transglycosylase KM400_07780 PF00905 Penicillin binding protein transpeptidase domain KM400_07785 PF03838 Recombination protein U KM400_07790 PF10720 Protein of unknown function (DUF2515) KM400_07825 PF06908 YspA SLOG family KM400_07830 PF05103 DivIVA protein KM400_07840 PF02926 THUMP domain KM400_07840 PF01170 Putative RNA methylase family UPF0020 KM400_07850 PF13307 Helicase C-terminal domain KM400_07855 PF02074 Carboxypeptidase Taq (M32) metallopeptidase KM400_07865 PF01636 Phosphotransferase enzyme family KM400_07870 PF00557 Metallopeptidase family M24 KM400_07875 PF00156 Phosphoribosyl transferase domain KM400_07880 PF00860 Permease family KM400_07885 PF04235 Protein of unknown function (DUF418) KM400_07890 PF00350 Dynamin family KM400_07900 PF00583 Acetyltransferase (GNAT) family KM400_07905 PF10752 Protein of unknown function (DUF2533) KM400_07910 PF00581 Rhodanese-like domain KM400_07945 PF00689 Cation transporting ATPase, C-terminus KM400_07945 PF00690 Cation transporter/ATPase, N-terminus KM400_07950 PF01367 5'-3' exonuclease, C-terminal SAM fold KM400_07950 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KM400_07975 PF02397 Bacterial sugar transferase KM400_07990 PF00535 Glycosyl transferase family 2 KM400_08010 PF18014 Acetyltransferase (GNAT) domain KM400_08010 PF13673 Acetyltransferase (GNAT) domain KM400_08030 PF13456 Reverse transcriptase-like KM400_08035 PF01263 Aldose 1-epimerase KM400_08060 PF00313 'Cold-shock' DNA-binding domain KM400_08070 PF01810 LysE type translocator KM400_08085 PF04341 Protein of unknown function, DUF485 KM400_08090 PF00474 Sodium:solute symporter family KM400_08095 PF00202 Aminotransferase class-III KM400_08105 PF00999 Sodium/hydrogen exchanger family KM400_08110 PF00753 Metallo-beta-lactamase superfamily KM400_08110 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KM400_08110 PF17770 Ribonuclease J C-terminal domain KM400_08115 PF13411 MerR HTH family regulatory protein KM400_08115 PF06445 GyrI-like small molecule binding domain KM400_08125 PF04239 Protein of unknown function (DUF421) KM400_08130 PF02698 DUF218 domain KM400_08140 PF00881 Nitroreductase family KM400_08185 PF17209 Hfq protein KM400_08195 PF01618 MotA/TolQ/ExbB proton channel family KM400_08200 PF13677 Membrane MotB of proton-channel complex MotA/MotB KM400_08200 PF00691 OmpA family KM400_08205 PF00072 Response regulator receiver domain KM400_08210 PF01584 CheW-like domain KM400_08210 PF07194 P2 response regulator binding domain KM400_08210 PF01627 Hpt domain KM400_08210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_08210 PF02895 Signal transducing histidine kinase, homodimeric domain KM400_08215 PF02895 Signal transducing histidine kinase, homodimeric domain KM400_08215 PF01584 CheW-like domain KM400_08215 PF01627 Hpt domain KM400_08215 PF07194 P2 response regulator binding domain KM400_08215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_08220 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KM400_08220 PF04509 CheC-like family KM400_08235 PF03705 CheR methyltransferase, all-alpha domain KM400_08235 PF01739 CheR methyltransferase, SAM binding domain KM400_08255 PF00460 Flagella basal body rod protein KM400_08255 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM400_08280 PF00460 Flagella basal body rod protein KM400_08285 PF00460 Flagella basal body rod protein KM400_08285 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM400_08290 PF02049 Flagellar hook-basal body complex protein FliE KM400_08300 PF01706 FliG C-terminal domain KM400_08300 PF14841 FliG middle domain KM400_08300 PF14842 FliG N-terminal domain KM400_08310 PF18269 T3SS EscN ATPase C-terminal domain KM400_08310 PF02874 ATP synthase alpha/beta family, beta-barrel domain KM400_08310 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM400_08335 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM400_08335 PF07559 Flagellar basal body protein FlaE KM400_08335 PF00460 Flagella basal body rod protein KM400_08350 PF00072 Response regulator receiver domain KM400_08350 PF01584 CheW-like domain KM400_08355 PF12181 DNA binding domain of the motility gene repressor (MogR) KM400_08360 PF00535 Glycosyl transferase family 2 KM400_08400 PF00700 Bacterial flagellin C-terminal helical region KM400_08400 PF00669 Bacterial flagellin N-terminal helical region KM400_08405 PF01464 Transglycosylase SLT domain KM400_08420 PF04509 CheC-like family KM400_08420 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KM400_08430 PF00813 FliP family KM400_08435 PF01313 Bacterial export proteins, family 3 KM400_08445 PF01312 FlhB HrpN YscU SpaS Family KM400_08450 PF00771 FHIPEP family KM400_08455 PF00448 SRP54-type protein, GTPase domain KM400_08460 PF00460 Flagella basal body rod protein KM400_08460 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM400_08465 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM400_08465 PF01411 tRNA synthetases class II (A) KM400_08465 PF02272 DHHA1 domain KM400_08490 PF17932 Tetracyclin repressor-like, C-terminal domain KM400_08490 PF00440 Bacterial regulatory proteins, tetR family KM400_08495 PF17329 Family of unknown function (DUF5367) KM400_08510 PF03992 Antibiotic biosynthesis monooxygenase KM400_08515 PF08141 Small acid-soluble spore protein H family KM400_08540 PF00005 ABC transporter KM400_08540 PF08402 TOBE domain KM400_08550 PF00528 Binding-protein-dependent transport system inner membrane component KM400_08555 PF12706 Beta-lactamase superfamily domain KM400_08555 PF00753 Metallo-beta-lactamase superfamily KM400_08565 PF10787 Uncharacterised protein from bacillus cereus group KM400_08580 PF07943 Penicillin-binding protein 5, C-terminal domain KM400_08580 PF00768 D-alanyl-D-alanine carboxypeptidase KM400_08590 PF00300 Histidine phosphatase superfamily (branch 1) KM400_08620 PF00733 Asparagine synthase KM400_08620 PF13537 Glutamine amidotransferase domain KM400_08640 PF16916 Dimerisation domain of Zinc Transporter KM400_08640 PF01545 Cation efflux family KM400_08650 PF00392 Bacterial regulatory proteins, gntR family KM400_08650 PF07729 FCD domain KM400_08655 PF00892 EamA-like transporter family KM400_08660 PF07683 Cobalamin synthesis protein cobW C-terminal domain KM400_08660 PF02492 CobW/HypB/UreG, nucleotide-binding domain KM400_08665 PF03773 Predicted permease KM400_08675 PF00535 Glycosyl transferase family 2 KM400_08680 PF03553 Na+/H+ antiporter family KM400_08685 PF10415 Fumarase C C-terminus KM400_08685 PF00206 Lyase KM400_08710 PF03575 Peptidase family S51 KM400_08730 PF02683 Cytochrome C biogenesis protein transmembrane region KM400_08735 PF00578 AhpC/TSA family KM400_08755 PF00291 Pyridoxal-phosphate dependent enzyme KM400_08760 PF04286 Protein of unknown function (DUF445) KM400_08785 PF00072 Response regulator receiver domain KM400_08785 PF00196 Bacterial regulatory proteins, luxR family KM400_08790 PF13185 GAF domain KM400_08790 PF13492 GAF domain KM400_08790 PF07730 Histidine kinase KM400_08790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_08795 PF00005 ABC transporter KM400_08810 PF13091 PLD-like domain KM400_08815 PF00696 Amino acid kinase family KM400_08820 PF00375 Sodium:dicarboxylate symporter family KM400_08825 PF10415 Fumarase C C-terminus KM400_08825 PF00206 Lyase KM400_08830 PF00390 Malic enzyme, N-terminal domain KM400_08830 PF03949 Malic enzyme, NAD binding domain KM400_08835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_08840 PF00072 Response regulator receiver domain KM400_08840 PF08664 YcbB domain KM400_08845 PF04434 SWIM zinc finger KM400_08845 PF00176 SNF2 family N-terminal domain KM400_08845 PF00271 Helicase conserved C-terminal domain KM400_08860 PF03590 Aspartate-ammonia ligase KM400_08880 PF13840 ACT domain KM400_08880 PF00696 Amino acid kinase family KM400_08890 PF13761 Domain of unknown function (DUF4166) KM400_08895 PF14158 YndJ-like protein KM400_08905 PF02368 Bacterial Ig-like domain (group 2) KM400_08905 PF13205 Bacterial Ig-like domain KM400_08905 PF00395 S-layer homology domain KM400_08915 PF07690 Major Facilitator Superfamily KM400_08930 PF02554 Carbon starvation protein CstA KM400_08935 PF03976 Polyphosphate kinase 2 (PPK2) KM400_08940 PF07690 Major Facilitator Superfamily KM400_08945 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM400_08945 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM400_08955 PF13167 GTP-binding GTPase N-terminal KM400_08955 PF01926 50S ribosome-binding GTPase KM400_08955 PF16360 GTP-binding GTPase Middle Region KM400_08970 PF00291 Pyridoxal-phosphate dependent enzyme KM400_08985 PF01943 Polysaccharide biosynthesis protein KM400_08985 PF14667 Polysaccharide biosynthesis C-terminal domain KM400_08990 PF00209 Sodium:neurotransmitter symporter family KM400_08995 PF01522 Polysaccharide deacetylase KM400_08995 PF00457 Glycosyl hydrolases family 11 KM400_08995 PF03422 Carbohydrate binding module (family 6) KM400_09005 PF04239 Protein of unknown function (DUF421) KM400_09020 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM400_09020 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KM400_09035 PF01625 Peptide methionine sulfoxide reductase KM400_09045 PF01063 Amino-transferase class IV KM400_09050 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM400_09050 PF00205 Thiamine pyrophosphate enzyme, central domain KM400_09050 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM400_09055 PF10369 Small subunit of acetolactate synthase KM400_09060 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KM400_09060 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KM400_09065 PF00920 Dehydratase family KM400_09070 PF00291 Pyridoxal-phosphate dependent enzyme KM400_09070 PF00585 C-terminal regulatory domain of Threonine dehydratase KM400_09100 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase KM400_09110 PF04397 LytTr DNA-binding domain KM400_09110 PF00072 Response regulator receiver domain KM400_09115 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain KM400_09115 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain KM400_09130 PF01979 Amidohydrolase family KM400_09135 PF12146 Serine aminopeptidase, S33 KM400_09135 PF13026 Protein of unknown function (DUF3887) KM400_09140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM400_09165 PF13186 Iron-sulfur cluster-binding domain KM400_09165 PF04055 Radical SAM superfamily KM400_09170 PF13302 Acetyltransferase (GNAT) domain KM400_09175 PF00072 Response regulator receiver domain KM400_09175 PF00486 Transcriptional regulatory protein, C terminal KM400_09180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_09180 PF00512 His Kinase A (phospho-acceptor) domain KM400_09190 PF01566 Natural resistance-associated macrophage protein KM400_09195 PF00581 Rhodanese-like domain KM400_09195 PF12368 Rhodanase C-terminal KM400_09195 PF17773 UPF0176 acylphosphatase like domain KM400_09205 PF02558 Ketopantoate reductase PanE/ApbA KM400_09205 PF08546 Ketopantoate reductase PanE/ApbA C terminal KM400_09220 PF05791 Bacillus haemolytic enterotoxin (HBL) KM400_09235 PF04198 Putative sugar-binding domain KM400_09240 PF01791 DeoC/LacD family aldolase KM400_09245 PF01773 Na+ dependent nucleoside transporter N-terminus KM400_09245 PF07662 Na+ dependent nucleoside transporter C-terminus KM400_09250 PF02885 Glycosyl transferase family, helical bundle domain KM400_09250 PF00591 Glycosyl transferase family, a/b domain KM400_09250 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain KM400_09255 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM400_09265 PF05979 Bacterial protein of unknown function (DUF896) KM400_09285 PF05195 Aminopeptidase P, N-terminal domain KM400_09285 PF00557 Metallopeptidase family M24 KM400_09290 PF07731 Multicopper oxidase KM400_09290 PF07732 Multicopper oxidase KM400_09295 PF01551 Peptidase family M23 KM400_09305 PF13342 C-terminal repeat of topoisomerase KM400_09305 PF01396 Topoisomerase DNA binding C4 zinc finger KM400_09305 PF01751 Toprim domain KM400_09305 PF01131 DNA topoisomerase KM400_09320 PF02525 Flavodoxin-like fold KM400_09335 PF04234 CopC domain KM400_09335 PF05425 Copper resistance protein D KM400_09335 PF13115 YtkA-like KM400_09340 PF07987 Domain of unkown function (DUF1775) KM400_09350 PF00892 EamA-like transporter family KM400_09355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM400_09355 PF03466 LysR substrate binding domain KM400_09360 PF02082 Transcriptional regulator KM400_09365 PF01323 DSBA-like thioredoxin domain KM400_09370 PF00881 Nitroreductase family KM400_09375 PF01425 Amidase KM400_09380 PF01594 AI-2E family transporter KM400_09385 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KM400_09385 PF00056 lactate/malate dehydrogenase, NAD binding domain KM400_09390 PF01593 Flavin containing amine oxidoreductase KM400_09395 PF07683 Cobalamin synthesis protein cobW C-terminal domain KM400_09395 PF02492 CobW/HypB/UreG, nucleotide-binding domain KM400_09410 PF00501 AMP-binding enzyme KM400_09410 PF13193 AMP-binding enzyme C-terminal domain KM400_09415 PF01575 MaoC like domain KM400_09420 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM400_09420 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM400_09430 PF00005 ABC transporter KM400_09430 PF12399 Branched-chain amino acid ATP-binding cassette transporter KM400_09435 PF00005 ABC transporter KM400_09440 PF02653 Branched-chain amino acid transport system / permease component KM400_09450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM400_09450 PF03466 LysR substrate binding domain KM400_09460 PF14552 Tautomerase enzyme KM400_09470 PF01047 MarR family KM400_09480 PF01654 Cytochrome bd terminal oxidase subunit I KM400_09485 PF02322 Cytochrome bd terminal oxidase subunit II KM400_09490 PF00005 ABC transporter KM400_09490 PF00664 ABC transporter transmembrane region KM400_09495 PF00005 ABC transporter KM400_09495 PF00664 ABC transporter transmembrane region KM400_09510 PF02016 LD-carboxypeptidase N-terminal domain KM400_09510 PF17676 LD-carboxypeptidase C-terminal domain KM400_09515 PF07943 Penicillin-binding protein 5, C-terminal domain KM400_09515 PF00768 D-alanyl-D-alanine carboxypeptidase KM400_09530 PF01476 LysM domain KM400_09530 PF00877 NlpC/P60 family KM400_09545 PF00486 Transcriptional regulatory protein, C terminal KM400_09545 PF00072 Response regulator receiver domain KM400_09560 PF00106 short chain dehydrogenase KM400_09570 PF04439 Streptomycin adenylyltransferase KM400_09575 PF01522 Polysaccharide deacetylase KM400_09595 PF01842 ACT domain KM400_09595 PF00742 Homoserine dehydrogenase KM400_09595 PF03447 Homoserine dehydrogenase, NAD binding domain KM400_09600 PF00291 Pyridoxal-phosphate dependent enzyme KM400_09605 PF08544 GHMP kinases C terminal KM400_09605 PF00288 GHMP kinases N terminal domain KM400_09620 PF03816 Cell envelope-related transcriptional attenuator domain KM400_09630 PF00486 Transcriptional regulatory protein, C terminal KM400_09630 PF00072 Response regulator receiver domain KM400_09635 PF00989 PAS fold KM400_09635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_09635 PF00512 His Kinase A (phospho-acceptor) domain KM400_09635 PF16736 Single Cache-like KM400_09640 PF01522 Polysaccharide deacetylase KM400_09650 PF02308 MgtC family KM400_09655 PF00583 Acetyltransferase (GNAT) family KM400_09660 PF06276 Ferric iron reductase FhuF-like transporter KM400_09660 PF04183 IucA / IucC family KM400_09665 PF04183 IucA / IucC family KM400_09665 PF06276 Ferric iron reductase FhuF-like transporter KM400_09670 PF13193 AMP-binding enzyme C-terminal domain KM400_09670 PF00501 AMP-binding enzyme KM400_09685 PF01261 Xylose isomerase-like TIM barrel KM400_09690 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM400_09695 PF07690 Major Facilitator Superfamily KM400_09700 PF01810 LysE type translocator KM400_09710 PF01734 Patatin-like phospholipase KM400_09735 PF13344 Haloacid dehalogenase-like hydrolase KM400_09735 PF00293 NUDIX domain KM400_09740 PF02540 NAD synthase KM400_09745 PF02687 FtsX-like permease family KM400_09750 PF18277 AbrB C-terminal domain KM400_09750 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KM400_09755 PF00082 Subtilase family KM400_09760 PF01022 Bacterial regulatory protein, arsR family KM400_09765 PF00248 Aldo/keto reductase family KM400_09790 PF03193 RsgA GTPase KM400_09795 PF00672 HAMP domain KM400_09795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM400_09795 PF02743 Cache domain KM400_09815 PF00210 Ferritin-like domain KM400_09830 PF00296 Luciferase-like monooxygenase KM400_09840 PF01593 Flavin containing amine oxidoreductase KM400_09850 PF00248 Aldo/keto reductase family KM400_09855 PF02492 CobW/HypB/UreG, nucleotide-binding domain KM400_09855 PF07683 Cobalamin synthesis protein cobW C-terminal domain KM400_09860 PF00583 Acetyltransferase (GNAT) family KM400_09915 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment KM400_09915 PF01297 Zinc-uptake complex component A periplasmic KM400_09925 PF13460 NAD(P)H-binding KM400_09930 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KM400_09935 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KM400_09935 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KM400_09945 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM400_09950 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM400_09960 PF00300 Histidine phosphatase superfamily (branch 1) KM400_09970 PF08757 CotH kinase protein KM400_09975 PF00293 NUDIX domain KM400_09980 PF09335 SNARE associated Golgi protein KM400_09985 PF14667 Polysaccharide biosynthesis C-terminal domain KM400_09985 PF01943 Polysaccharide biosynthesis protein KM400_09995 PF03773 Predicted permease KM400_10000 PF09323 Domain of unknown function (DUF1980) KM400_10005 PF03061 Thioesterase superfamily KM400_10015 PF13091 PLD-like domain KM400_10015 PF13396 Phospholipase_D-nuclease N-terminal KM400_10030 PF13460 NAD(P)H-binding KM400_10035 PF04306 Protein of unknown function (DUF456) KM400_10040 PF00571 CBS domain KM400_10040 PF01595 Cyclin M transmembrane N-terminal domain KM400_10040 PF03471 Transporter associated domain KM400_10055 PF05525 Branched-chain amino acid transport protein KM400_10060 PF01588 Putative tRNA binding domain KM400_10080 PF07454 Stage II sporulation protein P (SpoIIP) KM400_10090 PF02557 D-alanyl-D-alanine carboxypeptidase KM400_10100 PF01425 Amidase KM400_10105 PF07690 Major Facilitator Superfamily KM400_10115 PF01145 SPFH domain / Band 7 family KM400_10120 PF00300 Histidine phosphatase superfamily (branch 1) KM400_10135 PF00842 Alanine racemase, C-terminal domain KM400_10135 PF01168 Alanine racemase, N-terminal domain KM400_10140 PF13847 Methyltransferase domain KM400_10155 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase KM400_10160 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM400_10160 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM400_10165 PF00155 Aminotransferase class I and II KM400_10165 PF00392 Bacterial regulatory proteins, gntR family KM400_10190 PF00583 Acetyltransferase (GNAT) family KM400_10240 PF09579 Sporulation protein YtfJ (Spore_YtfJ) KM400_10265 PF01209 ubiE/COQ5 methyltransferase family KM400_10270 PF01268 Formate--tetrahydrofolate ligase KM400_10280 PF00270 DEAD/DEAH box helicase KM400_10280 PF00271 Helicase conserved C-terminal domain KM400_10290 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM400_10300 PF00107 Zinc-binding dehydrogenase KM400_10300 PF08240 Alcohol dehydrogenase GroES-like domain KM400_10305 PF04542 Sigma-70 region 2 KM400_10305 PF08281 Sigma-70, region 4 KM400_10330 PF00255 Glutathione peroxidase KM400_10335 PF11992 Domain of unknown function (DUF3488) KM400_10335 PF13559 Domain of unknown function (DUF4129) KM400_10335 PF01841 Transglutaminase-like superfamily KM400_10340 PF01882 Protein of unknown function DUF58 KM400_10345 PF07726 ATPase family associated with various cellular activities (AAA) KM400_10345 PF17863 AAA lid domain KM400_10360 PF00384 Molybdopterin oxidoreductase KM400_10360 PF01568 Molydopterin dinucleotide binding domain KM400_10360 PF14710 Respiratory nitrate reductase alpha N-terminal KM400_10365 PF13247 4Fe-4S dicluster domain KM400_10365 PF14711 Respiratory nitrate reductase beta C-terminal KM400_10370 PF02613 Nitrate reductase delta subunit KM400_10375 PF02665 Nitrate reductase gamma subunit KM400_10380 PF00392 Bacterial regulatory proteins, gntR family KM400_10380 PF00155 Aminotransferase class I and II KM400_10385 PF00005 ABC transporter KM400_10395 PF00027 Cyclic nucleotide-binding domain KM400_10395 PF00325 Bacterial regulatory proteins, crp family KM400_10400 PF06463 Molybdenum Cofactor Synthesis C KM400_10400 PF04055 Radical SAM superfamily KM400_10405 PF00899 ThiF family KM400_10410 PF03453 MoeA N-terminal region (domain I and II) KM400_10410 PF00994 Probable molybdopterin binding domain KM400_10410 PF03454 MoeA C-terminal region (domain IV) KM400_10415 PF02391 MoaE protein KM400_10425 PF07690 Major Facilitator Superfamily KM400_10445 PF01903 CbiX KM400_10450 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM400_10455 PF00355 Rieske [2Fe-2S] domain KM400_10460 PF04324 BFD-like [2Fe-2S] binding domain KM400_10460 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KM400_10460 PF18267 Rubredoxin NAD+ reductase C-terminal domain KM400_10460 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM400_10460 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KM400_10465 PF04405 Domain of Unknown function (DUF542) KM400_10465 PF01814 Hemerythrin HHE cation binding domain KM400_10500 PF04232 Stage V sporulation protein S (SpoVS) KM400_10515 PF01510 N-acetylmuramoyl-L-alanine amidase KM400_10530 PF01966 HD domain KM400_10535 PF00005 ABC transporter KM400_10535 PF16326 ABC transporter C-terminal domain KM400_10535 PF12848 ABC transporter KM400_10550 PF00436 Single-strand binding protein family KM400_10555 PF00440 Bacterial regulatory proteins, tetR family KM400_10565 PF08712 Scaffold protein Nfu/NifU N terminal KM400_10565 PF13769 Virulence factor KM400_10575 PF06491 Disulphide isomerase KM400_10580 PF04445 Putative SAM-dependent methyltransferase KM400_10585 PF03485 Arginyl tRNA synthetase N terminal domain KM400_10585 PF05746 DALR anticodon binding domain KM400_10585 PF00750 tRNA synthetases class I (R) KM400_10610 PF08264 Anticodon-binding domain of tRNA KM400_10610 PF00133 tRNA synthetases class I (I, L, M and V) KM400_10630 PF01336 OB-fold nucleic acid binding domain KM400_10630 PF00152 tRNA synthetases class II (D, K and N) KM400_10650 PF12538 DNA transporter KM400_10650 PF01580 FtsK/SpoIIIE family KM400_10720 PF02595 Glycerate kinase family KM400_10725 PF00939 Sodium:sulfate symporter transmembrane region KM400_10730 PF00072 Response regulator receiver domain KM400_10730 PF00486 Transcriptional regulatory protein, C terminal KM400_10735 PF00672 HAMP domain KM400_10735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_10735 PF00512 His Kinase A (phospho-acceptor) domain KM400_10750 PF00209 Sodium:neurotransmitter symporter family KM400_10765 PF10997 Alternate to MurJ KM400_10770 PF13419 Haloacid dehalogenase-like hydrolase KM400_10780 PF00465 Iron-containing alcohol dehydrogenase KM400_10785 PF01177 Asp/Glu/Hydantoin racemase KM400_10790 PF01980 tRNA-methyltransferase O KM400_10795 PF00583 Acetyltransferase (GNAT) family KM400_10810 PF00005 ABC transporter KM400_10820 PF14005 YpjP-like protein KM400_10825 PF13419 Haloacid dehalogenase-like hydrolase KM400_10845 PF00144 Beta-lactamase KM400_10845 PF07930 D-aminopeptidase, domain B KM400_10850 PF00303 Thymidylate synthase KM400_10855 PF00186 Dihydrofolate reductase KM400_10860 PF05223 NTF2-like N-terminal transpeptidase domain KM400_10860 PF03717 Penicillin-binding Protein dimerisation domain KM400_10860 PF00905 Penicillin binding protein transpeptidase domain KM400_10865 PF02525 Flavodoxin-like fold KM400_10870 PF01553 Acyltransferase KM400_10875 PF03006 Haemolysin-III related KM400_10880 PF02416 mttA/Hcf106 family KM400_10885 PF00902 Sec-independent protein translocase protein (TatC) KM400_10895 PF02645 Uncharacterised protein, DegV family COG1307 KM400_10905 PF02630 SCO1/SenC KM400_10910 PF00011 Hsp20/alpha crystallin family KM400_10915 PF00733 Asparagine synthase KM400_10915 PF13537 Glutamine amidotransferase domain KM400_10930 PF01497 Periplasmic binding protein KM400_10935 PF01063 Amino-transferase class IV KM400_10940 PF00881 Nitroreductase family KM400_10960 PF00293 NUDIX domain KM400_10965 PF00011 Hsp20/alpha crystallin family KM400_10970 PF00924 Mechanosensitive ion channel KM400_10975 PF07730 Histidine kinase KM400_10975 PF13185 GAF domain KM400_10980 PF00072 Response regulator receiver domain KM400_10980 PF00196 Bacterial regulatory proteins, luxR family KM400_10990 PF08240 Alcohol dehydrogenase GroES-like domain KM400_10990 PF00107 Zinc-binding dehydrogenase KM400_11005 PF00144 Beta-lactamase KM400_11015 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM400_11015 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM400_11020 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM400_11020 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM400_11035 PF03358 NADPH-dependent FMN reductase KM400_11050 PF00005 ABC transporter KM400_11050 PF00571 CBS domain KM400_11055 PF00528 Binding-protein-dependent transport system inner membrane component KM400_11060 PF13520 Amino acid permease KM400_11090 PF01595 Cyclin M transmembrane N-terminal domain KM400_11090 PF00571 CBS domain KM400_11090 PF03471 Transporter associated domain KM400_11095 PF00171 Aldehyde dehydrogenase family KM400_11100 PF07997 Protein of unknown function (DUF1694) KM400_11105 PF09385 Histidine kinase N terminal KM400_11115 PF00202 Aminotransferase class-III KM400_11120 PF01144 Coenzyme A transferase KM400_11125 PF01144 Coenzyme A transferase KM400_11130 PF01546 Peptidase family M20/M25/M40 KM400_11130 PF07687 Peptidase dimerisation domain KM400_11135 PF00583 Acetyltransferase (GNAT) family KM400_11140 PF02954 Bacterial regulatory protein, Fis family KM400_11140 PF13426 PAS domain KM400_11140 PF00158 Sigma-54 interaction domain KM400_11145 PF12544 Lysine-2,3-aminomutase KM400_11150 PF14122 YokU-like protein, putative antitoxin KM400_11155 PF06855 YozE SAM-like fold KM400_11170 PF14162 YozD-like protein KM400_11185 PF07070 SpoOM protein KM400_11190 PF01569 PAP2 superfamily KM400_11195 PF16916 Dimerisation domain of Zinc Transporter KM400_11195 PF01545 Cation efflux family KM400_11200 PF00085 Thioredoxin KM400_11215 PF04740 LXG domain of WXG superfamily KM400_11215 PF14436 Bacterial EndoU nuclease KM400_11220 PF03424 Carbohydrate binding domain (family 17/28) KM400_11220 PF00150 Cellulase (glycosyl hydrolase family 5) KM400_11220 PF00395 S-layer homology domain KM400_11230 PF04471 Restriction endonuclease KM400_11340 PF10676 Spore germination protein gerPA/gerPF KM400_11360 PF00905 Penicillin binding protein transpeptidase domain KM400_11360 PF00912 Transglycosylase KM400_11365 PF07690 Major Facilitator Superfamily KM400_11370 PF01521 Iron-sulphur cluster biosynthesis KM400_11375 PF00285 Citrate synthase, C-terminal domain KM400_11380 PF03972 MmgE/PrpD family KM400_11390 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM400_11390 PF02770 Acyl-CoA dehydrogenase, middle domain KM400_11390 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM400_11395 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM400_11395 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KM400_11400 PF00171 Aldehyde dehydrogenase family KM400_11405 PF01810 LysE type translocator KM400_11410 PF00378 Enoyl-CoA hydratase/isomerase KM400_11420 PF10763 Protein of unknown function (DUF2584) KM400_11425 PF00149 Calcineurin-like phosphoesterase KM400_11425 PF12320 Type 5 capsule protein repressor C-terminal domain KM400_11430 PF13476 AAA domain KM400_11445 PF01022 Bacterial regulatory protein, arsR family KM400_11455 PF07690 Major Facilitator Superfamily KM400_11460 PF00106 short chain dehydrogenase KM400_11465 PF00425 chorismate binding enzyme KM400_11470 PF00501 AMP-binding enzyme KM400_11470 PF13193 AMP-binding enzyme C-terminal domain KM400_11475 PF00857 Isochorismatase family KM400_11475 PF00550 Phosphopantetheine attachment site KM400_11485 PF03621 MbtH-like protein KM400_11490 PF07690 Major Facilitator Superfamily KM400_11505 PF00216 Bacterial DNA-binding protein KM400_11515 PF05163 DinB family KM400_11520 PF00082 Subtilase family KM400_11540 PF16291 Domain of unknown function (DUF4937 KM400_11545 PF01479 S4 domain KM400_11545 PF00849 RNA pseudouridylate synthase KM400_11550 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM400_11550 PF02824 TGS domain KM400_11550 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM400_11550 PF03129 Anticodon binding domain KM400_11565 PF12146 Serine aminopeptidase, S33 KM400_11570 PF07690 Major Facilitator Superfamily KM400_11595 PF13649 Methyltransferase domain KM400_11640 PF16123 Hydroxyacylglutathione hydrolase C-terminus KM400_11640 PF00753 Metallo-beta-lactamase superfamily KM400_11650 PF03176 MMPL family KM400_11660 PF00302 Chloramphenicol acetyltransferase KM400_11675 PF00583 Acetyltransferase (GNAT) family KM400_11705 PF01593 Flavin containing amine oxidoreductase KM400_11715 PF13302 Acetyltransferase (GNAT) domain KM400_11725 PF00313 'Cold-shock' DNA-binding domain KM400_11790 PF03466 LysR substrate binding domain KM400_11790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM400_11795 PF02774 Semialdehyde dehydrogenase, dimerisation domain KM400_11795 PF01118 Semialdehyde dehydrogenase, NAD binding domain KM400_11810 PF03466 LysR substrate binding domain KM400_11810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM400_11815 PF03475 3-alpha domain KM400_11815 PF03473 MOSC domain KM400_11830 PF00664 ABC transporter transmembrane region KM400_11830 PF00005 ABC transporter KM400_11835 PF00664 ABC transporter transmembrane region KM400_11835 PF00005 ABC transporter KM400_11850 PF01810 LysE type translocator KM400_11855 PF07883 Cupin domain KM400_11855 PF01381 Helix-turn-helix KM400_11880 PF00890 FAD binding domain KM400_11885 PF08281 Sigma-70, region 4 KM400_11885 PF04542 Sigma-70 region 2 KM400_11885 PF12680 SnoaL-like domain KM400_11910 PF02638 Glycosyl hydrolase-like 10 KM400_11920 PF02378 Phosphotransferase system, EIIC KM400_11930 PF03702 Anhydro-N-acetylmuramic acid kinase KM400_11935 PF01869 BadF/BadG/BcrA/BcrD ATPase family KM400_11940 PF02660 Glycerol-3-phosphate acyltransferase KM400_11945 PF00266 Aminotransferase class-V KM400_11950 PF00291 Pyridoxal-phosphate dependent enzyme KM400_11965 PF16123 Hydroxyacylglutathione hydrolase C-terminus KM400_11965 PF00753 Metallo-beta-lactamase superfamily KM400_11980 PF00270 DEAD/DEAH box helicase KM400_11980 PF00271 Helicase conserved C-terminal domain KM400_11995 PF00440 Bacterial regulatory proteins, tetR family KM400_11995 PF17932 Tetracyclin repressor-like, C-terminal domain KM400_12010 PF02687 FtsX-like permease family KM400_12010 PF12704 MacB-like periplasmic core domain KM400_12010 PF00005 ABC transporter KM400_12015 PF03848 Tellurite resistance protein TehB KM400_12015 PF09313 Domain of unknown function (DUF1971) KM400_12025 PF08241 Methyltransferase domain KM400_12030 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM400_12030 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM400_12030 PF00205 Thiamine pyrophosphate enzyme, central domain KM400_12035 PF12802 MarR family KM400_12040 PF00300 Histidine phosphatase superfamily (branch 1) KM400_12045 PF14171 Toxin SpoIISA, type II toxin-antitoxin system KM400_12075 PF07687 Peptidase dimerisation domain KM400_12075 PF01546 Peptidase family M20/M25/M40 KM400_12090 PF04542 Sigma-70 region 2 KM400_12090 PF08281 Sigma-70, region 4 KM400_12100 PF03717 Penicillin-binding Protein dimerisation domain KM400_12100 PF00905 Penicillin binding protein transpeptidase domain KM400_12105 PF03717 Penicillin-binding Protein dimerisation domain KM400_12105 PF00905 Penicillin binding protein transpeptidase domain KM400_12120 PF00356 Bacterial regulatory proteins, lacI family KM400_12130 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM400_12130 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KM400_12135 PF00294 pfkB family carbohydrate kinase KM400_12140 PF00171 Aldehyde dehydrogenase family KM400_12145 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM400_12145 PF00205 Thiamine pyrophosphate enzyme, central domain KM400_12145 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM400_12150 PF01261 Xylose isomerase-like TIM barrel KM400_12155 PF01116 Fructose-bisphosphate aldolase class-II KM400_12175 PF00149 Calcineurin-like phosphoesterase KM400_12175 PF02872 5'-nucleotidase, C-terminal domain KM400_12185 PF18801 response regulator aspartate phosphatase H, N terminal KM400_12190 PF01381 Helix-turn-helix KM400_12205 PF02557 D-alanyl-D-alanine carboxypeptidase KM400_12215 PF00395 S-layer homology domain KM400_12215 PF01520 N-acetylmuramoyl-L-alanine amidase KM400_12225 PF00440 Bacterial regulatory proteins, tetR family KM400_12230 PF00005 ABC transporter KM400_12230 PF16326 ABC transporter C-terminal domain KM400_12240 PF03707 Bacterial signalling protein N terminal repeat KM400_12240 PF00990 Diguanylate cyclase, GGDEF domain KM400_12240 PF00563 EAL domain KM400_12245 PF13302 Acetyltransferase (GNAT) domain KM400_12265 PF00753 Metallo-beta-lactamase superfamily KM400_12280 PF00005 ABC transporter KM400_12290 PF00440 Bacterial regulatory proteins, tetR family KM400_12290 PF08359 YsiA-like protein, C-terminal region KM400_12305 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM400_12305 PF02770 Acyl-CoA dehydrogenase, middle domain KM400_12305 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM400_12310 PF02785 Biotin carboxylase C-terminal domain KM400_12310 PF00289 Biotin carboxylase, N-terminal domain KM400_12310 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM400_12315 PF00364 Biotin-requiring enzyme KM400_12320 PF00682 HMGL-like KM400_12325 PF00378 Enoyl-CoA hydratase/isomerase KM400_12330 PF01039 Carboxyl transferase domain KM400_12335 PF16177 Acetyl-coenzyme A synthetase N-terminus KM400_12335 PF00501 AMP-binding enzyme KM400_12335 PF13193 AMP-binding enzyme C-terminal domain KM400_12345 PF00583 Acetyltransferase (GNAT) family KM400_12350 PF00485 Phosphoribulokinase / Uridine kinase family KM400_12360 PF05163 DinB family KM400_12365 PF07943 Penicillin-binding protein 5, C-terminal domain KM400_12365 PF00768 D-alanyl-D-alanine carboxypeptidase KM400_12370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_12370 PF00512 His Kinase A (phospho-acceptor) domain KM400_12375 PF00072 Response regulator receiver domain KM400_12375 PF00486 Transcriptional regulatory protein, C terminal KM400_12380 PF01966 HD domain KM400_12385 PF13021 Domain of unknown function (DUF3885) KM400_12390 PF01048 Phosphorylase superfamily KM400_12430 PF17755 UvrA DNA-binding domain KM400_12430 PF17760 UvrA interaction domain KM400_12430 PF17760 UvrA interaction domain KM400_12430 PF17755 UvrA DNA-binding domain KM400_12445 PF00144 Beta-lactamase KM400_12450 PF00376 MerR family regulatory protein KM400_12450 PF09278 MerR, DNA binding KM400_12455 PF07690 Major Facilitator Superfamily KM400_12475 PF01636 Phosphotransferase enzyme family KM400_12480 PF12833 Helix-turn-helix domain KM400_12495 PF00392 Bacterial regulatory proteins, gntR family KM400_12495 PF00155 Aminotransferase class I and II KM400_12510 PF00107 Zinc-binding dehydrogenase KM400_12510 PF08240 Alcohol dehydrogenase GroES-like domain KM400_12540 PF07486 Cell Wall Hydrolase KM400_12550 PF00486 Transcriptional regulatory protein, C terminal KM400_12550 PF00072 Response regulator receiver domain KM400_12565 PF12848 ABC transporter KM400_12565 PF00005 ABC transporter KM400_12580 PF00005 ABC transporter KM400_12605 PF03447 Homoserine dehydrogenase, NAD binding domain KM400_12605 PF00742 Homoserine dehydrogenase KM400_12605 PF01842 ACT domain KM400_12610 PF00155 Aminotransferase class I and II KM400_12610 PF00392 Bacterial regulatory proteins, gntR family KM400_12615 PF07478 D-ala D-ala ligase C-terminus KM400_12615 PF01820 D-ala D-ala ligase N-terminus KM400_12620 PF03070 TENA/THI-4/PQQC family KM400_12685 PF00067 Cytochrome P450 KM400_12695 PF00132 Bacterial transferase hexapeptide (six repeats) KM400_12700 PF07561 Domain of Unknown Function (DUF1540) KM400_12710 PF00067 Cytochrome P450 KM400_12730 PF00512 His Kinase A (phospho-acceptor) domain KM400_12730 PF00989 PAS fold KM400_12730 PF13426 PAS domain KM400_12730 PF13188 PAS domain KM400_12730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_12735 PF03717 Penicillin-binding Protein dimerisation domain KM400_12735 PF00905 Penicillin binding protein transpeptidase domain KM400_12740 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase KM400_12745 PF01177 Asp/Glu/Hydantoin racemase KM400_12750 PF07155 ECF-type riboflavin transporter, S component KM400_12755 PF00005 ABC transporter KM400_12755 PF12558 ATP-binding cassette cobalt transporter KM400_12770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_12770 PF00512 His Kinase A (phospho-acceptor) domain KM400_12780 PF04229 GrpB protein KM400_12785 PF00107 Zinc-binding dehydrogenase KM400_12785 PF08240 Alcohol dehydrogenase GroES-like domain KM400_12790 PF03717 Penicillin-binding Protein dimerisation domain KM400_12790 PF00905 Penicillin binding protein transpeptidase domain KM400_12790 PF03793 PASTA domain KM400_12800 PF00144 Beta-lactamase KM400_12800 PF11954 Domain of unknown function (DUF3471) KM400_12835 PF01965 DJ-1/PfpI family KM400_12850 PF00144 Beta-lactamase KM400_12865 PF07690 Major Facilitator Superfamily KM400_12880 PF03009 Glycerophosphoryl diester phosphodiesterase family KM400_12905 PF01270 Glycosyl hydrolases family 8 KM400_12915 PF13344 Haloacid dehalogenase-like hydrolase KM400_12915 PF00293 NUDIX domain KM400_12925 PF00144 Beta-lactamase KM400_12935 PF07690 Major Facilitator Superfamily KM400_12950 PF09297 NADH pyrophosphatase zinc ribbon domain KM400_12950 PF00293 NUDIX domain KM400_12955 PF00712 DNA polymerase III beta subunit, N-terminal domain KM400_12955 PF02767 DNA polymerase III beta subunit, central domain KM400_12955 PF02768 DNA polymerase III beta subunit, C-terminal domain KM400_12960 PF00293 NUDIX domain KM400_12975 PF12706 Beta-lactamase superfamily domain KM400_12995 PF09234 Domain of unknown function (DUF1963) KM400_13020 PF08000 Bacterial PH domain KM400_13030 PF12867 DinB superfamily KM400_13045 PF02673 Bacitracin resistance protein BacA KM400_13055 PF01541 GIY-YIG catalytic domain KM400_13095 PF01266 FAD dependent oxidoreductase KM400_13120 PF13419 Haloacid dehalogenase-like hydrolase KM400_13135 PF07859 alpha/beta hydrolase fold KM400_13140 PF00282 Pyridoxal-dependent decarboxylase conserved domain KM400_13145 PF13193 AMP-binding enzyme C-terminal domain KM400_13145 PF00550 Phosphopantetheine attachment site KM400_13145 PF00668 Condensation domain KM400_13145 PF00501 AMP-binding enzyme KM400_13155 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KM400_13155 PF00128 Alpha amylase, catalytic domain KM400_13155 PF03714 Bacterial pullanase-associated domain KM400_13160 PF02868 Thermolysin metallopeptidase, alpha-helical domain KM400_13160 PF01447 Thermolysin metallopeptidase, catalytic domain KM400_13160 PF03413 Peptidase propeptide and YPEB domain KM400_13160 PF07504 Fungalysin/Thermolysin Propeptide Motif KM400_13180 PF00344 SecY translocase KM400_13185 PF11638 DnaA N-terminal domain KM400_13185 PF00308 Bacterial dnaA protein KM400_13185 PF08299 Bacterial dnaA protein helix-turn-helix KM400_13190 PF00892 EamA-like transporter family KM400_13195 PF00155 Aminotransferase class I and II KM400_13195 PF00392 Bacterial regulatory proteins, gntR family KM400_13200 PF00561 alpha/beta hydrolase fold KM400_13225 PF06081 Aromatic acid exporter family member 1 KM400_13240 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) KM400_13245 PF03413 Peptidase propeptide and YPEB domain KM400_13245 PF14620 YpeB sporulation KM400_13250 PF07486 Cell Wall Hydrolase KM400_13250 PF01471 Putative peptidoglycan binding domain KM400_13265 PF03301 Tryptophan 2,3-dioxygenase KM400_13270 PF04199 Putative cyclase KM400_13275 PF00266 Aminotransferase class-V KM400_13280 PF00440 Bacterial regulatory proteins, tetR family KM400_13280 PF08359 YsiA-like protein, C-terminal region KM400_13285 PF00293 NUDIX domain KM400_13285 PF13344 Haloacid dehalogenase-like hydrolase KM400_13310 PF02954 Bacterial regulatory protein, Fis family KM400_13310 PF01590 GAF domain KM400_13310 PF00158 Sigma-54 interaction domain KM400_13325 PF13302 Acetyltransferase (GNAT) domain KM400_13330 PF00455 DeoR C terminal sensor domain KM400_13330 PF08220 DeoR-like helix-turn-helix domain KM400_13345 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM400_13345 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM400_13345 PF00403 Heavy-metal-associated domain KM400_13350 PF02082 Transcriptional regulator KM400_13365 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM400_13365 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM400_13370 PF02817 e3 binding domain KM400_13370 PF00364 Biotin-requiring enzyme KM400_13370 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM400_13375 PF02780 Transketolase, C-terminal domain KM400_13375 PF02779 Transketolase, pyrimidine binding domain KM400_13380 PF00676 Dehydrogenase E1 component KM400_13390 PF00106 short chain dehydrogenase KM400_13395 PF04229 GrpB protein KM400_13395 PF13673 Acetyltransferase (GNAT) domain KM400_13425 PF00528 Binding-protein-dependent transport system inner membrane component KM400_13430 PF00571 CBS domain KM400_13430 PF00005 ABC transporter KM400_13435 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KM400_13440 PF00574 Clp protease KM400_13455 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KM400_13460 PF13673 Acetyltransferase (GNAT) domain KM400_13465 PF18416 N-acetylglucosamine binding protein domain 2 KM400_13465 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading KM400_13480 PF10990 Protein of unknown function (DUF2809) KM400_13505 PF13567 Domain of unknown function (DUF4131) KM400_13505 PF03772 Competence protein KM400_13505 PF00753 Metallo-beta-lactamase superfamily KM400_13555 PF13538 UvrD-like helicase C-terminal domain KM400_13570 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like KM400_13575 PF16124 RecQ zinc-binding KM400_13575 PF00570 HRDC domain KM400_13575 PF00271 Helicase conserved C-terminal domain KM400_13575 PF00270 DEAD/DEAH box helicase KM400_13575 PF09382 RQC domain KM400_13615 PF01368 DHH family KM400_13615 PF02833 DHHA2 domain KM400_13620 PF18416 N-acetylglucosamine binding protein domain 2 KM400_13620 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading KM400_13635 PF02627 Carboxymuconolactone decarboxylase family KM400_13640 PF01235 Sodium:alanine symporter family KM400_13645 PF00171 Aldehyde dehydrogenase family KM400_13650 PF00701 Dihydrodipicolinate synthetase family KM400_13655 PF05544 Proline racemase KM400_13660 PF05544 Proline racemase KM400_13665 PF01266 FAD dependent oxidoreductase KM400_13670 PF00158 Sigma-54 interaction domain KM400_13670 PF13188 PAS domain KM400_13670 PF02954 Bacterial regulatory protein, Fis family KM400_13685 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM400_13685 PF04324 BFD-like [2Fe-2S] binding domain KM400_13700 PF08876 Domain of unknown function (DUF1836) KM400_13705 PF09335 SNARE associated Golgi protein KM400_13720 PF04914 DltD protein KM400_13725 PF00958 GMP synthase C terminal domain KM400_13725 PF03352 Methyladenine glycosylase KM400_13725 PF13302 Acetyltransferase (GNAT) domain KM400_13725 PF13673 Acetyltransferase (GNAT) domain KM400_13725 PF00117 Glutamine amidotransferase class-I KM400_13730 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM400_13735 PF00877 NlpC/P60 family KM400_13735 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain KM400_13740 PF13378 Enolase C-terminal domain-like KM400_13740 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KM400_13760 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM400_13785 PF02129 X-Pro dipeptidyl-peptidase (S15 family) KM400_13785 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain KM400_13790 PF16736 Single Cache-like KM400_13790 PF00512 His Kinase A (phospho-acceptor) domain KM400_13790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_13790 PF00989 PAS fold KM400_13795 PF00486 Transcriptional regulatory protein, C terminal KM400_13795 PF00072 Response regulator receiver domain KM400_13815 PF01048 Phosphorylase superfamily KM400_13825 PF03808 Glycosyl transferase WecB/TagA/CpsF family KM400_13830 PF01432 Peptidase family M3 KM400_13830 PF08439 Oligopeptidase F KM400_13845 PF02645 Uncharacterised protein, DegV family COG1307 KM400_13865 PF07690 Major Facilitator Superfamily KM400_13875 PF04519 Polymer-forming cytoskeletal KM400_13880 PF13171 Protein of unknown function (DUF4004) KM400_13885 PF12793 Sugar transport-related sRNA regulator N-term KM400_13885 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM400_13890 PF07690 Major Facilitator Superfamily KM400_13910 PF04226 Transglycosylase associated protein KM400_13915 PF01156 Inosine-uridine preferring nucleoside hydrolase KM400_13925 PF08241 Methyltransferase domain KM400_13960 PF00155 Aminotransferase class I and II KM400_13965 PF07977 FabA-like domain KM400_13970 PF03630 Fumble KM400_13990 PF00005 ABC transporter KM400_14035 PF01594 AI-2E family transporter KM400_14045 PF00296 Luciferase-like monooxygenase KM400_14050 PF00528 Binding-protein-dependent transport system inner membrane component KM400_14055 PF09084 NMT1/THI5 like KM400_14060 PF00005 ABC transporter KM400_14080 PF00293 NUDIX domain KM400_14080 PF09297 NADH pyrophosphatase zinc ribbon domain KM400_14100 PF02522 Aminoglycoside 3-N-acetyltransferase KM400_14125 PF13536 Putative multidrug resistance efflux transporter KM400_14130 PF12867 DinB superfamily KM400_14150 PF08713 DNA alkylation repair enzyme KM400_14160 PF01522 Polysaccharide deacetylase KM400_14170 PF03741 Integral membrane protein TerC family KM400_14175 PF00884 Sulfatase KM400_14180 PF00005 ABC transporter KM400_14180 PF12848 ABC transporter KM400_14195 PF16295 Tetracyclin repressor-like, C-terminal domain KM400_14195 PF00440 Bacterial regulatory proteins, tetR family KM400_14205 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KM400_14210 PF01842 ACT domain KM400_14210 PF02153 Prephenate dehydrogenase KM400_14215 PF00155 Aminotransferase class I and II KM400_14220 PF01264 Chorismate synthase KM400_14225 PF01817 Chorismate mutase type II KM400_14225 PF00793 DAHP synthetase I family KM400_14245 PF01636 Phosphotransferase enzyme family KM400_14260 PF06725 3D domain KM400_14260 PF01476 LysM domain KM400_14270 PF04542 Sigma-70 region 2 KM400_14270 PF08281 Sigma-70, region 4 KM400_14290 PF06039 Malate:quinone oxidoreductase (Mqo) KM400_14295 PF13407 Periplasmic binding protein domain KM400_14300 PF02653 Branched-chain amino acid transport system / permease component KM400_14305 PF02653 Branched-chain amino acid transport system / permease component KM400_14310 PF00005 ABC transporter KM400_14315 PF00325 Bacterial regulatory proteins, crp family KM400_14315 PF04198 Putative sugar-binding domain KM400_14320 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM400_14320 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM400_14330 PF01791 DeoC/LacD family aldolase KM400_14350 PF03992 Antibiotic biosynthesis monooxygenase KM400_14370 PF07662 Na+ dependent nucleoside transporter C-terminus KM400_14370 PF01773 Na+ dependent nucleoside transporter N-terminus KM400_14375 PF00171 Aldehyde dehydrogenase family KM400_14380 PF00696 Amino acid kinase family KM400_14380 PF01472 PUA domain KM400_14385 PF03807 NADP oxidoreductase coenzyme F420-dependent KM400_14385 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM400_14390 PF01546 Peptidase family M20/M25/M40 KM400_14395 PF09339 IclR helix-turn-helix domain KM400_14395 PF01614 Bacterial transcriptional regulator KM400_14400 PF00324 Amino acid permease KM400_14405 PF01139 tRNA-splicing ligase RtcB KM400_14410 PF00487 Fatty acid desaturase KM400_14415 PF00245 Alkaline phosphatase KM400_14420 PF11188 Protein of unknown function (DUF2975) KM400_14425 PF13443 Cro/C1-type HTH DNA-binding domain KM400_14440 PF10086 YhfC intramembrane metalloprotease KM400_14450 PF04397 LytTr DNA-binding domain KM400_14450 PF00072 Response regulator receiver domain KM400_14460 PF13302 Acetyltransferase (GNAT) domain KM400_14465 PF12681 Glyoxalase-like domain KM400_14485 PF17863 AAA lid domain KM400_14485 PF07726 ATPase family associated with various cellular activities (AAA) KM400_14500 PF07690 Major Facilitator Superfamily KM400_14510 PF00535 Glycosyl transferase family 2 KM400_14525 PF00535 Glycosyl transferase family 2 KM400_14535 PF00535 Glycosyl transferase family 2 KM400_14545 PF00202 Aminotransferase class-III KM400_14550 PF00199 Catalase KM400_14550 PF06628 Catalase-related immune-responsive KM400_14560 PF13382 Adenine deaminase C-terminal domain KM400_14560 PF01979 Amidohydrolase family KM400_14565 PF00144 Beta-lactamase KM400_14585 PF07726 ATPase family associated with various cellular activities (AAA) KM400_14585 PF17863 AAA lid domain KM400_14595 PF00881 Nitroreductase family KM400_14600 PF01047 MarR family KM400_14605 PF03764 Elongation factor G, domain IV KM400_14605 PF00679 Elongation factor G C-terminus KM400_14605 PF14492 Elongation Factor G, domain II KM400_14605 PF00009 Elongation factor Tu GTP binding domain KM400_14615 PF00293 NUDIX domain KM400_14630 PF00005 ABC transporter KM400_14635 PF00392 Bacterial regulatory proteins, gntR family KM400_14645 PF02687 FtsX-like permease family KM400_14645 PF00005 ABC transporter KM400_14645 PF12704 MacB-like periplasmic core domain KM400_14670 PF12833 Helix-turn-helix domain KM400_14675 PF00583 Acetyltransferase (GNAT) family KM400_14690 PF00892 EamA-like transporter family KM400_14695 PF00392 Bacterial regulatory proteins, gntR family KM400_14695 PF00155 Aminotransferase class I and II KM400_14700 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 KM400_14705 PF13031 Protein of unknown function (DUF3892) KM400_14715 PF00672 HAMP domain KM400_14715 PF00512 His Kinase A (phospho-acceptor) domain KM400_14720 PF00072 Response regulator receiver domain KM400_14720 PF00486 Transcriptional regulatory protein, C terminal KM400_14725 PF00561 alpha/beta hydrolase fold KM400_14755 PF01925 Sulfite exporter TauE/SafE KM400_14760 PF13302 Acetyltransferase (GNAT) domain KM400_14765 PF00324 Amino acid permease KM400_14775 PF08713 DNA alkylation repair enzyme KM400_14780 PF10898 Protein of unknown function (DUF2716) KM400_14800 PF00293 NUDIX domain KM400_14810 PF10502 Signal peptidase, peptidase S26 KM400_14815 PF03717 Penicillin-binding Protein dimerisation domain KM400_14815 PF00905 Penicillin binding protein transpeptidase domain KM400_14825 PF02146 Sir2 family KM400_14850 PF03746 LamB/YcsF family KM400_14860 PF02682 Carboxyltransferase domain, subdomain C and D KM400_14865 PF01614 Bacterial transcriptional regulator KM400_14865 PF09339 IclR helix-turn-helix domain KM400_14870 PF10502 Signal peptidase, peptidase S26 KM400_14875 PF03932 CutC family KM400_14880 PF07454 Stage II sporulation protein P (SpoIIP) KM400_14895 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM400_14895 PF02770 Acyl-CoA dehydrogenase, middle domain KM400_14895 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KM400_14910 PF07670 Nucleoside recognition KM400_14925 PF02915 Rubrerythrin KM400_14935 PF00440 Bacterial regulatory proteins, tetR family KM400_14940 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KM400_14940 PF00391 PEP-utilising enzyme, mobile domain KM400_14945 PF00753 Metallo-beta-lactamase superfamily KM400_14960 PF07875 Coat F domain KM400_14965 PF08892 YqcI/YcgG family KM400_14970 PF01810 LysE type translocator KM400_14985 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM400_14990 PF10710 Protein of unknown function (DUF2512) KM400_14995 PF11553 Protein of unknown function (DUF3231) KM400_15000 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM400_15005 PF00107 Zinc-binding dehydrogenase KM400_15005 PF13823 Alcohol dehydrogenase GroES-associated KM400_15005 PF08240 Alcohol dehydrogenase GroES-like domain KM400_15020 PF10415 Fumarase C C-terminus KM400_15020 PF00206 Lyase KM400_15025 PF00710 Asparaginase, N-terminal KM400_15025 PF17763 Glutaminase/Asparaginase C-terminal domain KM400_15030 PF01381 Helix-turn-helix KM400_15040 PF01541 GIY-YIG catalytic domain KM400_15040 PF02151 UvrB/uvrC motif KM400_15040 PF08459 UvrC Helix-hairpin-helix N-terminal KM400_15040 PF12826 Helix-hairpin-helix motif KM400_15045 PF13520 Amino acid permease KM400_15050 PF05525 Branched-chain amino acid transport protein KM400_15055 PF03807 NADP oxidoreductase coenzyme F420-dependent KM400_15055 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM400_15060 PF13564 DoxX-like family KM400_15065 PF00390 Malic enzyme, N-terminal domain KM400_15065 PF03949 Malic enzyme, NAD binding domain KM400_15080 PF03845 Spore germination protein KM400_15090 PF08664 YcbB domain KM400_15090 PF00072 Response regulator receiver domain KM400_15100 PF04960 Glutaminase KM400_15105 PF01235 Sodium:alanine symporter family KM400_15135 PF17936 Bacterial Ig domain KM400_15135 PF02872 5'-nucleotidase, C-terminal domain KM400_15135 PF00149 Calcineurin-like phosphoesterase KM400_15140 PF00199 Catalase KM400_15140 PF06628 Catalase-related immune-responsive KM400_15145 PF00561 alpha/beta hydrolase fold KM400_15150 PF00857 Isochorismatase family KM400_15165 PF01979 Amidohydrolase family KM400_15170 PF03466 LysR substrate binding domain KM400_15170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM400_15175 PF01047 MarR family KM400_15180 PF01544 CorA-like Mg2+ transporter protein KM400_15195 PF11181 Heat induced stress protein YflT KM400_15210 PF03073 TspO/MBR family KM400_15215 PF00875 DNA photolyase KM400_15215 PF03441 FAD binding domain of DNA photolyase KM400_15225 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) KM400_15230 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KM400_15230 PF00361 Proton-conducting membrane transporter KM400_15235 PF10057 Uncharacterized conserved protein (DUF2294) KM400_15250 PF01040 UbiA prenyltransferase family KM400_15255 PF00561 alpha/beta hydrolase fold KM400_15260 PF01297 Zinc-uptake complex component A periplasmic KM400_15265 PF00950 ABC 3 transport family KM400_15270 PF00005 ABC transporter KM400_15295 PF01451 Low molecular weight phosphotyrosine protein phosphatase KM400_15300 PF01758 Sodium Bile acid symporter family KM400_15305 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM400_15310 PF01022 Bacterial regulatory protein, arsR family KM400_15325 PF00012 Hsp70 protein KM400_15340 PF01037 Lrp/AsnC ligand binding domain KM400_15360 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM400_15380 PF02805 Metal binding domain of Ada KM400_15380 PF12833 Helix-turn-helix domain KM400_15390 PF00144 Beta-lactamase KM400_15415 PF12802 MarR family KM400_15420 PF00067 Cytochrome P450 KM400_15420 PF00175 Oxidoreductase NAD-binding domain KM400_15420 PF00258 Flavodoxin KM400_15420 PF00667 FAD binding domain KM400_15425 PF07690 Major Facilitator Superfamily KM400_15450 PF00072 Response regulator receiver domain KM400_15450 PF00486 Transcriptional regulatory protein, C terminal KM400_15455 PF00672 HAMP domain KM400_15455 PF00512 His Kinase A (phospho-acceptor) domain KM400_15455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_15480 PF00291 Pyridoxal-phosphate dependent enzyme KM400_15500 PF01381 Helix-turn-helix KM400_15515 PF00753 Metallo-beta-lactamase superfamily KM400_15520 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family KM400_15530 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM400_15530 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM400_15535 PF04072 Leucine carboxyl methyltransferase KM400_15550 PF00005 ABC transporter KM400_15555 PF02687 FtsX-like permease family KM400_15570 PF00672 HAMP domain KM400_15570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_15570 PF00512 His Kinase A (phospho-acceptor) domain KM400_15575 PF00072 Response regulator receiver domain KM400_15575 PF00486 Transcriptional regulatory protein, C terminal KM400_15585 PF01047 MarR family KM400_15595 PF04299 Putative FMN-binding domain KM400_15600 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM400_15600 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM400_15605 PF07690 Major Facilitator Superfamily KM400_15610 PF02589 LUD domain KM400_15615 PF13183 4Fe-4S dicluster domain KM400_15615 PF11870 Domain of unknown function (DUF3390) KM400_15615 PF02589 LUD domain KM400_15620 PF02754 Cysteine-rich domain KM400_15625 PF03466 LysR substrate binding domain KM400_15625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM400_15635 PF17676 LD-carboxypeptidase C-terminal domain KM400_15635 PF02016 LD-carboxypeptidase N-terminal domain KM400_15665 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KM400_15665 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM400_15670 PF05116 Sucrose-6F-phosphate phosphohydrolase KM400_15680 PF00356 Bacterial regulatory proteins, lacI family KM400_15685 PF18801 response regulator aspartate phosphatase H, N terminal KM400_15705 PF00817 impB/mucB/samB family KM400_15705 PF11799 impB/mucB/samB family C-terminal domain KM400_15705 PF11798 IMS family HHH motif KM400_15720 PF02743 Cache domain KM400_15720 PF00672 HAMP domain KM400_15720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM400_15735 PF01554 MatE KM400_15745 PF18496 Collagenase G catalytic helper subdomain KM400_15745 PF08453 Peptidase family M9 N-terminal KM400_15745 PF01752 Collagenase KM400_15755 PF07690 Major Facilitator Superfamily KM400_15760 PF16859 Tetracyclin repressor-like, C-terminal domain KM400_15760 PF00440 Bacterial regulatory proteins, tetR family KM400_15770 PF01022 Bacterial regulatory protein, arsR family KM400_15780 PF03313 Serine dehydratase alpha chain KM400_15795 PF00202 Aminotransferase class-III KM400_15800 PF00708 Acylphosphatase KM400_15800 PF17788 HypF Kae1-like domain KM400_15800 PF01300 Telomere recombination KM400_15800 PF07503 HypF finger KM400_15805 PF02769 AIR synthase related protein, C-terminal domain KM400_15805 PF00586 AIR synthase related protein, N-terminal domain KM400_15815 PF01037 Lrp/AsnC ligand binding domain KM400_15820 PF13520 Amino acid permease KM400_15835 PF01842 ACT domain KM400_15835 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KM400_15835 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KM400_15840 PF00266 Aminotransferase class-V KM400_15855 PF08281 Sigma-70, region 4 KM400_15855 PF04542 Sigma-70 region 2 KM400_15870 PF07883 Cupin domain KM400_15875 PF12833 Helix-turn-helix domain KM400_15875 PF01497 Periplasmic binding protein KM400_15880 PF01804 Penicillin amidase KM400_15920 PF14044 NETI protein KM400_15925 PF07690 Major Facilitator Superfamily KM400_15930 PF12697 Alpha/beta hydrolase family KM400_15935 PF01047 MarR family KM400_15940 PF07690 Major Facilitator Superfamily KM400_15950 PF12679 ABC-2 family transporter protein KM400_15955 PF00005 ABC transporter KM400_15955 PF13732 Domain of unknown function (DUF4162) KM400_15960 PF13396 Phospholipase_D-nuclease N-terminal KM400_15970 PF17314 Family of unknown function (DUF5360) KM400_15975 PF00893 Small Multidrug Resistance protein KM400_15980 PF00440 Bacterial regulatory proteins, tetR family KM400_15985 PF01289 Thiol-activated cytolysin KM400_15985 PF17440 Thiol-activated cytolysin beta sandwich domain KM400_15990 PF02667 Short chain fatty acid transporter KM400_16000 PF02525 Flavodoxin-like fold KM400_16030 PF00005 ABC transporter KM400_16035 PF02361 Cobalt transport protein KM400_16050 PF03737 Aldolase/RraA KM400_16055 PF03606 C4-dicarboxylate anaerobic carrier KM400_16060 PF04231 Endonuclease I KM400_16075 PF01381 Helix-turn-helix KM400_16080 PF02660 Glycerol-3-phosphate acyltransferase KM400_16085 PF04073 Aminoacyl-tRNA editing domain KM400_16090 PF13393 Histidyl-tRNA synthetase KM400_16090 PF03129 Anticodon binding domain KM400_16105 PF01638 HxlR-like helix-turn-helix KM400_16110 PF00881 Nitroreductase family KM400_16120 PF00224 Pyruvate kinase, barrel domain KM400_16120 PF00391 PEP-utilising enzyme, mobile domain KM400_16120 PF02887 Pyruvate kinase, alpha/beta domain KM400_16140 PF00005 ABC transporter KM400_16165 PF13419 Haloacid dehalogenase-like hydrolase KM400_16175 PF13350 Tyrosine phosphatase family KM400_16200 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM400_16205 PF00480 ROK family KM400_16210 PF07690 Major Facilitator Superfamily KM400_16215 PF14602 Hexapeptide repeat of succinyl-transferase KM400_16215 PF12464 Maltose acetyltransferase KM400_16225 PF00005 ABC transporter KM400_16225 PF02687 FtsX-like permease family KM400_16225 PF12704 MacB-like periplasmic core domain KM400_16235 PF00579 tRNA synthetases class I (W and Y) KM400_16240 PF13288 DXP reductoisomerase C-terminal domain KM400_16240 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KM400_16240 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KM400_16245 PF01594 AI-2E family transporter KM400_16265 PF08241 Methyltransferase domain KM400_16275 PF07690 Major Facilitator Superfamily KM400_16295 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM400_16305 PF00571 CBS domain KM400_16305 PF03471 Transporter associated domain KM400_16305 PF01595 Cyclin M transmembrane N-terminal domain KM400_16310 PF13411 MerR HTH family regulatory protein KM400_16315 PF00892 EamA-like transporter family KM400_16320 PF00805 Pentapeptide repeats (8 copies) KM400_16325 PF06906 Protein of unknown function (DUF1272) KM400_16330 PF10282 Lactonase, 7-bladed beta-propeller KM400_16335 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM400_16335 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM400_16340 PF02447 GntP family permease KM400_16345 PF00923 Transaldolase/Fructose-6-phosphate aldolase KM400_16350 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain KM400_16350 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM400_16355 PF02779 Transketolase, pyrimidine binding domain KM400_16355 PF02780 Transketolase, C-terminal domain KM400_16355 PF00456 Transketolase, thiamine diphosphate binding domain KM400_16360 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KM400_16360 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KM400_16365 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KM400_16365 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KM400_16370 PF00107 Zinc-binding dehydrogenase KM400_16370 PF08240 Alcohol dehydrogenase GroES-like domain KM400_16375 PF00296 Luciferase-like monooxygenase KM400_16385 PF02801 Beta-ketoacyl synthase, C-terminal domain KM400_16385 PF00698 Acyl transferase domain KM400_16385 PF08240 Alcohol dehydrogenase GroES-like domain KM400_16385 PF16197 Ketoacyl-synthetase C-terminal extension KM400_16385 PF00109 Beta-ketoacyl synthase, N-terminal domain KM400_16385 PF14765 Polyketide synthase dehydratase KM400_16385 PF00550 Phosphopantetheine attachment site KM400_16385 PF08659 KR domain KM400_16390 PF00106 short chain dehydrogenase KM400_16395 PF02868 Thermolysin metallopeptidase, alpha-helical domain KM400_16395 PF01447 Thermolysin metallopeptidase, catalytic domain KM400_16395 PF03413 Peptidase propeptide and YPEB domain KM400_16395 PF07504 Fungalysin/Thermolysin Propeptide Motif KM400_16415 PF00248 Aldo/keto reductase family KM400_16420 PF07690 Major Facilitator Superfamily KM400_16430 PF03928 Haem-degrading KM400_16435 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM400_16465 PF03960 ArsC family KM400_16470 PF01638 HxlR-like helix-turn-helix KM400_16475 PF00392 Bacterial regulatory proteins, gntR family KM400_16475 PF07702 UTRA domain KM400_16480 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM400_16480 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KM400_16490 PF01638 HxlR-like helix-turn-helix KM400_16495 PF01638 HxlR-like helix-turn-helix KM400_16500 PF00248 Aldo/keto reductase family KM400_16530 PF02567 Phenazine biosynthesis-like protein KM400_16550 PF00501 AMP-binding enzyme KM400_16550 PF13193 AMP-binding enzyme C-terminal domain KM400_16560 PF01638 HxlR-like helix-turn-helix KM400_16580 PF01022 Bacterial regulatory protein, arsR family KM400_16590 PF12791 Anti-sigma factor N-terminus KM400_16595 PF04542 Sigma-70 region 2 KM400_16610 PF00440 Bacterial regulatory proteins, tetR family KM400_16630 PF05656 Protein of unknown function (DUF805) KM400_16635 PF01061 ABC-2 type transporter KM400_16640 PF13732 Domain of unknown function (DUF4162) KM400_16640 PF00005 ABC transporter KM400_16655 PF03063 Prismane/CO dehydrogenase family KM400_16665 PF00753 Metallo-beta-lactamase superfamily KM400_16670 PF01183 Glycosyl hydrolases family 25 KM400_16670 PF01471 Putative peptidoglycan binding domain KM400_16695 PF00144 Beta-lactamase KM400_16735 PF00753 Metallo-beta-lactamase superfamily KM400_16740 PF00107 Zinc-binding dehydrogenase KM400_16740 PF08240 Alcohol dehydrogenase GroES-like domain KM400_16745 PF00324 Amino acid permease KM400_16750 PF07690 Major Facilitator Superfamily KM400_16775 PF02585 GlcNAc-PI de-N-acetylase KM400_16780 PF08830 Protein of unknown function (DUF1806) KM400_16785 PF03600 Citrate transporter KM400_16805 PF01497 Periplasmic binding protein KM400_16810 PF01032 FecCD transport family KM400_16815 PF01032 FecCD transport family KM400_16820 PF05675 Protein of unknown function (DUF817) KM400_16825 PF02567 Phenazine biosynthesis-like protein KM400_16830 PF13170 Protein of unknown function (DUF4003) KM400_16845 PF10901 Protein of unknown function (DUF2690) KM400_16855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM400_16855 PF03466 LysR substrate binding domain KM400_16860 PF00107 Zinc-binding dehydrogenase KM400_16860 PF08240 Alcohol dehydrogenase GroES-like domain KM400_16875 PF00488 MutS domain V KM400_16875 PF01713 Smr domain KM400_16890 PF00797 N-acetyltransferase KM400_16895 PF01432 Peptidase family M3 KM400_16895 PF08439 Oligopeptidase F KM400_16900 PF00144 Beta-lactamase KM400_16915 PF03466 LysR substrate binding domain KM400_16915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM400_16930 PF03009 Glycerophosphoryl diester phosphodiesterase family KM400_16950 PF01494 FAD binding domain KM400_16955 PF01022 Bacterial regulatory protein, arsR family KM400_16960 PF00107 Zinc-binding dehydrogenase KM400_16960 PF08240 Alcohol dehydrogenase GroES-like domain KM400_16965 PF02696 Uncharacterized ACR, YdiU/UPF0061 family KM400_16980 PF04299 Putative FMN-binding domain KM400_16995 PF01758 Sodium Bile acid symporter family KM400_17000 PF01565 FAD binding domain KM400_17000 PF02913 FAD linked oxidases, C-terminal domain KM400_17020 PF00132 Bacterial transferase hexapeptide (six repeats) KM400_17025 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KM400_17030 PF00535 Glycosyl transferase family 2 KM400_17035 PF00378 Enoyl-CoA hydratase/isomerase KM400_17040 PF18496 Collagenase G catalytic helper subdomain KM400_17040 PF01752 Collagenase KM400_17040 PF08453 Peptidase family M9 N-terminal KM400_17045 PF02308 MgtC family KM400_17060 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM400_17065 PF04294 VanW like protein KM400_17075 PF13039 Protein of unknown function (DUF3900) KM400_17075 PF13037 Domain of unknown function (DUF3898) KM400_17095 PF00313 'Cold-shock' DNA-binding domain KM400_17105 PF00258 Flavodoxin KM400_17115 PF00293 NUDIX domain KM400_17125 PF00132 Bacterial transferase hexapeptide (six repeats) KM400_17135 PF00106 short chain dehydrogenase KM400_17155 PF01156 Inosine-uridine preferring nucleoside hydrolase KM400_17160 PF00474 Sodium:solute symporter family KM400_17170 PF00171 Aldehyde dehydrogenase family KM400_17180 PF14151 YfhD-like protein KM400_17185 PF13249 Squalene-hopene cyclase N-terminal domain KM400_17185 PF13243 Squalene-hopene cyclase C-terminal domain KM400_17190 PF02681 Divergent PAP2 family KM400_17195 PF00892 EamA-like transporter family KM400_17200 PF06961 Protein of unknown function (DUF1294) KM400_17215 PF10609 NUBPL iron-transfer P-loop NTPase KM400_17225 PF02391 MoaE protein KM400_17230 PF03453 MoeA N-terminal region (domain I and II) KM400_17230 PF03454 MoeA C-terminal region (domain IV) KM400_17230 PF00994 Probable molybdopterin binding domain KM400_17235 PF00899 ThiF family KM400_17240 PF01226 Formate/nitrite transporter KM400_17245 PF06463 Molybdenum Cofactor Synthesis C KM400_17245 PF04055 Radical SAM superfamily KM400_17250 PF02634 FdhD/NarQ family KM400_17255 PF10057 Uncharacterized conserved protein (DUF2294) KM400_17260 PF07849 Protein of unknown function (DUF1641) KM400_17265 PF00384 Molybdopterin oxidoreductase KM400_17265 PF00037 4Fe-4S binding domain KM400_17265 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KM400_17265 PF01568 Molydopterin dinucleotide binding domain KM400_17265 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KM400_17275 PF03323 Bacillus/Clostridium GerA spore germination protein KM400_17315 PF08241 Methyltransferase domain KM400_17320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM400_17325 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM400_17330 PF00375 Sodium:dicarboxylate symporter family KM400_17335 PF03816 Cell envelope-related transcriptional attenuator domain KM400_17345 PF08281 Sigma-70, region 4 KM400_17345 PF04542 Sigma-70 region 2 KM400_17365 PF13732 Domain of unknown function (DUF4162) KM400_17365 PF00005 ABC transporter KM400_17375 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KM400_17375 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM400_17380 PF00521 DNA gyrase/topoisomerase IV, subunit A KM400_17380 PF03989 DNA gyrase C-terminal domain, beta-propeller KM400_17385 PF01751 Toprim domain KM400_17385 PF00986 DNA gyrase B subunit, carboxyl terminus KM400_17385 PF00204 DNA gyrase B KM400_17385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_17390 PF13380 CoA binding domain KM400_17395 PF13180 PDZ domain KM400_17400 PF00072 Response regulator receiver domain KM400_17400 PF00486 Transcriptional regulatory protein, C terminal KM400_17410 PF13597 Anaerobic ribonucleoside-triphosphate reductase KM400_17410 PF03477 ATP cone domain KM400_17415 PF02660 Glycerol-3-phosphate acyltransferase KM400_17420 PF01521 Iron-sulphur cluster biosynthesis KM400_17425 PF03061 Thioesterase superfamily KM400_17430 PF00704 Glycosyl hydrolases family 18 KM400_17430 PF01476 LysM domain KM400_17440 PF08177 Small acid-soluble spore protein N family KM400_17445 PF13040 Fur-regulated basic protein B KM400_17450 PF07733 Bacterial DNA polymerase III alpha NTPase domain KM400_17450 PF14579 Helix-hairpin-helix motif KM400_17450 PF11490 DNA polymerase III polC-type N-terminus II KM400_17450 PF02811 PHP domain KM400_17450 PF00929 Exonuclease KM400_17450 PF01336 OB-fold nucleic acid binding domain KM400_17450 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KM400_17455 PF00578 AhpC/TSA family KM400_17465 PF00664 ABC transporter transmembrane region KM400_17465 PF00005 ABC transporter KM400_17465 PF03412 Peptidase C39 family KM400_17470 PF00694 Aconitase C-terminal domain KM400_17470 PF00330 Aconitase family (aconitate hydratase) KM400_17480 PF01522 Polysaccharide deacetylase KM400_17510 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM400_17510 PF01411 tRNA synthetases class II (A) KM400_17510 PF02272 DHHA1 domain KM400_17515 PF13344 Haloacid dehalogenase-like hydrolase KM400_17515 PF00293 NUDIX domain KM400_17525 PF00108 Thiolase, N-terminal domain KM400_17525 PF02803 Thiolase, C-terminal domain KM400_17530 PF13193 AMP-binding enzyme C-terminal domain KM400_17530 PF00501 AMP-binding enzyme KM400_17535 PF02632 BioY family KM400_17540 PF13193 AMP-binding enzyme C-terminal domain KM400_17540 PF00501 AMP-binding enzyme KM400_17560 PF05532 CsbD-like KM400_17590 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM400_17590 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM400_17600 PF00512 His Kinase A (phospho-acceptor) domain KM400_17600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_17600 PF13426 PAS domain KM400_17600 PF13188 PAS domain KM400_17600 PF00989 PAS fold KM400_17605 PF01738 Dienelactone hydrolase family KM400_17610 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM400_17615 PF00474 Sodium:solute symporter family KM400_17620 PF01645 Conserved region in glutamate synthase KM400_17625 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KM400_17630 PF02559 CarD-like/TRCF domain KM400_17635 PF00491 Arginase family KM400_17640 PF01979 Amidohydrolase family KM400_17645 PF17391 Urocanase N-terminal domain KM400_17645 PF17392 Urocanase C-terminal domain KM400_17645 PF01175 Urocanase Rossmann-like domain KM400_17650 PF00221 Aromatic amino acid lyase KM400_17655 PF09021 HutP KM400_17660 PF01209 ubiE/COQ5 methyltransferase family KM400_17680 PF11084 Protein of unknown function (DUF2621) KM400_17715 PF07301 Protein of unknown function (DUF1453) KM400_17720 PF02683 Cytochrome C biogenesis protein transmembrane region KM400_17730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM400_17730 PF03466 LysR substrate binding domain KM400_17735 PF03788 LrgA family KM400_17740 PF04172 LrgB-like family KM400_17765 PF01471 Putative peptidoglycan binding domain KM400_17765 PF01510 N-acetylmuramoyl-L-alanine amidase KM400_17780 PF00005 ABC transporter KM400_17780 PF00664 ABC transporter transmembrane region KM400_17785 PF00664 ABC transporter transmembrane region KM400_17785 PF00005 ABC transporter KM400_17790 PF03672 Uncharacterised protein family (UPF0154) KM400_17795 PF10747 Sporulation inhibitor of replication protein SirA KM400_17800 PF02779 Transketolase, pyrimidine binding domain KM400_17800 PF02780 Transketolase, C-terminal domain KM400_17800 PF00456 Transketolase, thiamine diphosphate binding domain KM400_17805 PF12323 Helix-turn-helix domain KM400_17805 PF01385 Probable transposase KM400_17805 PF07282 Putative transposase DNA-binding domain KM400_17810 PF00528 Binding-protein-dependent transport system inner membrane component KM400_17815 PF00528 Binding-protein-dependent transport system inner membrane component KM400_17820 PF00005 ABC transporter KM400_17835 PF05979 Bacterial protein of unknown function (DUF896) KM400_17840 PF00239 Resolvase, N terminal domain KM400_17845 PF00717 Peptidase S24-like KM400_17845 PF01726 LexA DNA binding domain KM400_17860 PF03551 Transcriptional regulator PadR-like family KM400_17895 PF01471 Putative peptidoglycan binding domain KM400_17895 PF01476 LysM domain KM400_17895 PF01510 N-acetylmuramoyl-L-alanine amidase KM400_17900 PF05105 Bacteriophage holin family KM400_18045 PF08281 Sigma-70, region 4 KM400_18090 PF02511 Thymidylate synthase complementing protein KM400_18095 PF00145 C-5 cytosine-specific DNA methylase KM400_18175 PF01381 Helix-turn-helix KM400_18195 PF02899 Phage integrase, N-terminal SAM-like domain KM400_18195 PF00589 Phage integrase family KM400_18200 PF00120 Glutamine synthetase, catalytic domain KM400_18200 PF03951 Glutamine synthetase, beta-Grasp domain KM400_18205 PF13411 MerR HTH family regulatory protein KM400_18210 PF06838 Methionine gamma-lyase KM400_18215 PF16360 GTP-binding GTPase Middle Region KM400_18215 PF13167 GTP-binding GTPase N-terminal KM400_18215 PF01926 50S ribosome-binding GTPase KM400_18220 PF03458 UPF0126 domain KM400_18225 PF17866 AAA lid domain KM400_18225 PF00004 ATPase family associated with various cellular activities (AAA) KM400_18240 PF17209 Hfq protein KM400_18255 PF01476 LysM domain KM400_18255 PF06725 3D domain KM400_18260 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KM400_18260 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KM400_18265 PF00294 pfkB family carbohydrate kinase KM400_18270 PF00455 DeoR C terminal sensor domain KM400_18270 PF08220 DeoR-like helix-turn-helix domain KM400_18280 PF04238 Protein of unknown function (DUF420) KM400_18290 PF00324 Amino acid permease KM400_18295 PF00704 Glycosyl hydrolases family 18 KM400_18295 PF00041 Fibronectin type III domain KM400_18305 PF10518 TAT (twin-arginine translocation) pathway signal sequence KM400_18305 PF00149 Calcineurin-like phosphoesterase KM400_18310 PF01226 Formate/nitrite transporter KM400_18315 PF00216 Bacterial DNA-binding protein KM400_18320 PF00403 Heavy-metal-associated domain KM400_18325 PF00403 Heavy-metal-associated domain KM400_18330 PF02583 Metal-sensitive transcriptional repressor KM400_18340 PF00756 Putative esterase KM400_18345 PF00005 ABC transporter KM400_18350 PF01032 FecCD transport family KM400_18355 PF01032 FecCD transport family KM400_18370 PF12833 Helix-turn-helix domain KM400_18370 PF02805 Metal binding domain of Ada KM400_18375 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KM400_18375 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KM400_18380 PF00730 HhH-GPD superfamily base excision DNA repair protein KM400_18380 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain KM400_18385 PF07687 Peptidase dimerisation domain KM400_18385 PF01546 Peptidase family M20/M25/M40 KM400_18410 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM400_18415 PF00990 Diguanylate cyclase, GGDEF domain KM400_18415 PF03707 Bacterial signalling protein N terminal repeat KM400_18415 PF00563 EAL domain KM400_18430 PF10787 Uncharacterised protein from bacillus cereus group KM400_18435 PF04172 LrgB-like family KM400_18440 PF03788 LrgA family KM400_18445 PF00155 Aminotransferase class I and II KM400_18445 PF00392 Bacterial regulatory proteins, gntR family KM400_18450 PF00561 alpha/beta hydrolase fold KM400_18450 PF00364 Biotin-requiring enzyme KM400_18455 PF02585 GlcNAc-PI de-N-acetylase KM400_18470 PF00388 Phosphatidylinositol-specific phospholipase C, X domain KM400_18475 PF00082 Subtilase family KM400_18480 PF07486 Cell Wall Hydrolase KM400_18485 PF03275 UDP-galactopyranose mutase KM400_18490 PF00884 Sulfatase KM400_18495 PF00350 Dynamin family KM400_18505 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family KM400_18510 PF00512 His Kinase A (phospho-acceptor) domain KM400_18510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_18515 PF00486 Transcriptional regulatory protein, C terminal KM400_18515 PF00072 Response regulator receiver domain KM400_18530 PF00005 ABC transporter KM400_18535 PF01119 DNA mismatch repair protein, C-terminal domain KM400_18535 PF08676 MutL C terminal dimerisation domain KM400_18540 PF01624 MutS domain I KM400_18540 PF05192 MutS domain III KM400_18540 PF05190 MutS family domain IV KM400_18540 PF00488 MutS domain V KM400_18540 PF05188 MutS domain II KM400_18545 PF10628 Outer spore coat protein E (CotE) KM400_18550 PF06133 Control of competence regulator ComK, YlbF/YmcA KM400_18555 PF04055 Radical SAM superfamily KM400_18555 PF01938 TRAM domain KM400_18555 PF00919 Uncharacterized protein family UPF0004 KM400_18560 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM400_18565 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II KM400_18565 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg KM400_18565 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase KM400_18570 PF01244 Membrane dipeptidase (Peptidase family M19) KM400_18575 PF04232 Stage V sporulation protein S (SpoVS) KM400_18580 PF13277 YmdB-like protein KM400_18585 PF12072 Domain of unknown function (DUF3552) KM400_18585 PF00013 KH domain KM400_18585 PF01966 HD domain KM400_18590 PF00154 recA bacterial DNA recombination protein KM400_18600 PF00994 Probable molybdopterin binding domain KM400_18600 PF18146 Damage-inducible protein CinA KH domain KM400_18600 PF02464 Competence-damaged protein KM400_18605 PF01066 CDP-alcohol phosphatidyltransferase KM400_18610 PF13464 Domain of unknown function (DUF4115) KM400_18615 PF11868 Protein of unknown function (DUF3388) KM400_18620 PF11588 Protein of unknown function (DUF3243) KM400_18630 PF05193 Peptidase M16 inactive domain KM400_18630 PF00675 Insulinase (Peptidase family M16) KM400_18635 PF05193 Peptidase M16 inactive domain KM400_18640 PF02653 Branched-chain amino acid transport system / permease component KM400_18650 PF00005 ABC transporter KM400_18655 PF02608 ABC transporter substrate-binding protein PnrA-like KM400_18660 PF07702 UTRA domain KM400_18660 PF00392 Bacterial regulatory proteins, gntR family KM400_18665 PF17854 FtsK alpha domain KM400_18665 PF01580 FtsK/SpoIIIE family KM400_18665 PF09397 Ftsk gamma domain KM400_18670 PF14035 YlzJ-like protein KM400_18675 PF00574 Clp protease KM400_18680 PF00753 Metallo-beta-lactamase superfamily KM400_18680 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KM400_18680 PF17770 Ribonuclease J C-terminal domain KM400_18685 PF00701 Dihydrodipicolinate synthetase family KM400_18690 PF00696 Amino acid kinase family KM400_18690 PF13840 ACT domain KM400_18695 PF02774 Semialdehyde dehydrogenase, dimerisation domain KM400_18695 PF01118 Semialdehyde dehydrogenase, NAD binding domain KM400_18700 PF02441 Flavoprotein KM400_18705 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KM400_18705 PF16924 Dipicolinate synthase subunit A N-terminal domain KM400_18710 PF05239 PRC-barrel domain KM400_18715 PF00675 Insulinase (Peptidase family M16) KM400_18715 PF05193 Peptidase M16 inactive domain KM400_18720 PF01522 Polysaccharide deacetylase KM400_18725 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KM400_18725 PF01138 3' exoribonuclease family, domain 1 KM400_18725 PF03725 3' exoribonuclease family, domain 2 KM400_18725 PF00013 KH domain KM400_18725 PF00575 S1 RNA binding domain KM400_18730 PF00312 Ribosomal protein S15 KM400_18735 PF06574 FAD synthetase KM400_18735 PF01687 Riboflavin kinase KM400_18740 PF16198 tRNA pseudouridylate synthase B C-terminal domain KM400_18740 PF01509 TruB family pseudouridylate synthase (N terminal domain) KM400_18745 PF02033 Ribosome-binding factor A KM400_18750 PF04456 Protein of unknown function (DUF503) KM400_18755 PF00009 Elongation factor Tu GTP binding domain KM400_18755 PF04760 Translation initiation factor IF-2, N-terminal region KM400_18755 PF11987 Translation-initiation factor 2 KM400_18760 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family KM400_18765 PF04296 Protein of unknown function (DUF448) KM400_18770 PF00575 S1 RNA binding domain KM400_18770 PF08529 NusA N-terminal domain KM400_18770 PF13184 NusA-like KH domain KM400_18775 PF17384 RimP C-terminal SH3 domain KM400_18775 PF02576 RimP N-terminal domain KM400_18780 PF11490 DNA polymerase III polC-type N-terminus II KM400_18780 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KM400_18780 PF14480 DNA polymerase III polC-type N-terminus I KM400_18780 PF07733 Bacterial DNA polymerase III alpha NTPase domain KM400_18780 PF14579 Helix-hairpin-helix motif KM400_18780 PF02811 PHP domain KM400_18780 PF00929 Exonuclease KM400_18785 PF03129 Anticodon binding domain KM400_18785 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM400_18785 PF04073 Aminoacyl-tRNA editing domain KM400_18790 PF17820 PDZ domain KM400_18790 PF02163 Peptidase family M50 KM400_18795 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KM400_18795 PF13288 DXP reductoisomerase C-terminal domain KM400_18795 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KM400_18805 PF01255 Putative undecaprenyl diphosphate synthase KM400_18810 PF01765 Ribosome recycling factor KM400_18815 PF00696 Amino acid kinase family KM400_18820 PF00889 Elongation factor TS KM400_18825 PF00318 Ribosomal protein S2 KM400_18830 PF08222 CodY helix-turn-helix domain KM400_18830 PF06018 CodY GAF-like domain KM400_18835 PF00004 ATPase family associated with various cellular activities (AAA) KM400_18835 PF10431 C-terminal, D2-small domain, of ClpB protein KM400_18835 PF07724 AAA domain (Cdc48 subfamily) KM400_18840 PF00227 Proteasome subunit KM400_18845 PF00589 Phage integrase family KM400_18845 PF02899 Phage integrase, N-terminal SAM-like domain KM400_18850 PF01134 Glucose inhibited division protein A KM400_18855 PF01751 Toprim domain KM400_18855 PF01396 Topoisomerase DNA binding C4 zinc finger KM400_18855 PF01131 DNA topoisomerase KM400_18865 PF00549 CoA-ligase KM400_18865 PF02629 CoA binding domain KM400_18870 PF08442 ATP-grasp domain KM400_18870 PF00549 CoA-ligase KM400_18875 PF01351 Ribonuclease HII KM400_18880 PF01926 50S ribosome-binding GTPase KM400_18885 PF10502 Signal peptidase, peptidase S26 KM400_18890 PF01245 Ribosomal protein L19 KM400_18895 PF01746 tRNA (Guanine-1)-methyltransferase KM400_18900 PF05239 PRC-barrel domain KM400_18900 PF01782 RimM N-terminal domain KM400_18910 PF00886 Ribosomal protein S16 KM400_18915 PF02978 Signal peptide binding domain KM400_18915 PF02881 SRP54-type protein, helical bundle domain KM400_18915 PF00448 SRP54-type protein, GTPase domain KM400_18920 PF04297 Putative helix-turn-helix protein, YlxM / p13 like KM400_18925 PF02881 SRP54-type protein, helical bundle domain KM400_18925 PF00448 SRP54-type protein, GTPase domain KM400_18930 PF02463 RecF/RecN/SMC N terminal domain KM400_18930 PF06470 SMC proteins Flexible Hinge Domain KM400_18935 PF14622 Ribonuclease-III-like KM400_18935 PF00035 Double-stranded RNA binding motif KM400_18940 PF00550 Phosphopantetheine attachment site KM400_18950 PF00698 Acyl transferase domain KM400_18955 PF02504 Fatty acid synthesis protein KM400_18960 PF03061 Thioesterase superfamily KM400_18965 PF17191 RecG wedge domain KM400_18965 PF00270 DEAD/DEAH box helicase KM400_18965 PF00271 Helicase conserved C-terminal domain KM400_18970 PF13684 Dihydroxyacetone kinase family KM400_18970 PF02734 DAK2 domain KM400_18975 PF03780 Asp23 family, cell envelope-related function KM400_18980 PF00830 Ribosomal L28 family KM400_18985 PF08183 Stage V sporulation protein family KM400_18990 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain KM400_18990 PF04263 Thiamin pyrophosphokinase, catalytic domain KM400_18995 PF00834 Ribulose-phosphate 3 epimerase family KM400_19000 PF16745 RsgA N-terminal domain KM400_19000 PF03193 RsgA GTPase KM400_19005 PF03793 PASTA domain KM400_19005 PF00069 Protein kinase domain KM400_19015 PF04055 Radical SAM superfamily KM400_19020 PF01189 16S rRNA methyltransferase RsmB/F KM400_19020 PF01029 NusB family KM400_19025 PF02911 Formyl transferase, C-terminal domain KM400_19025 PF00551 Formyl transferase KM400_19030 PF01327 Polypeptide deformylase KM400_19035 PF04851 Type III restriction enzyme, res subunit KM400_19035 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KM400_19035 PF17764 3′ DNA-binding domain (3′BD) KM400_19035 PF18074 Primosomal protein N C-terminal domain KM400_19035 PF00271 Helicase conserved C-terminal domain KM400_19040 PF04127 DNA / pantothenate metabolism flavoprotein KM400_19040 PF02441 Flavoprotein KM400_19045 PF01192 RNA polymerase Rpb6 KM400_19050 PF00625 Guanylate kinase KM400_19055 PF04025 Domain of unknown function (DUF370) KM400_19060 PF08340 Domain of unknown function (DUF1732) KM400_19060 PF03755 YicC-like family, N-terminal region KM400_19065 PF00689 Cation transporting ATPase, C-terminus KM400_19065 PF00690 Cation transporter/ATPase, N-terminus KM400_19070 PF05670 NFACT protein RNA binding domain KM400_19075 PF00557 Metallopeptidase family M24 KM400_19075 PF01321 Creatinase/Prolidase N-terminal domain KM400_19105 PF00156 Phosphoribosyl transferase domain KM400_19110 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KM400_19115 PF01180 Dihydroorotate dehydrogenase KM400_19120 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B KM400_19120 PF00175 Oxidoreductase NAD-binding domain KM400_19125 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM400_19125 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KM400_19125 PF02142 MGS-like domain KM400_19130 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KM400_19130 PF00117 Glutamine amidotransferase class-I KM400_19135 PF01979 Amidohydrolase family KM400_19140 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KM400_19140 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KM400_19145 PF00860 Permease family KM400_19150 PF00156 Phosphoribosyl transferase domain KM400_19155 PF00849 RNA pseudouridylate synthase KM400_19155 PF01479 S4 domain KM400_19160 PF01252 Signal peptidase (SPase) II KM400_19170 PF08264 Anticodon-binding domain of tRNA KM400_19170 PF00133 tRNA synthetases class I (I, L, M and V) KM400_19170 PF06827 Zinc finger found in FPG and IleRS KM400_19175 PF05103 DivIVA protein KM400_19180 PF17774 Putative RNA-binding domain in YlmH KM400_19180 PF01479 S4 domain KM400_19185 PF02325 YGGT family KM400_19190 PF04472 Cell division protein SepF KM400_19195 PF01168 Alanine racemase, N-terminal domain KM400_19200 PF02578 Multi-copper polyphenol oxidoreductase laccase KM400_19205 PF05239 PRC-barrel domain KM400_19210 PF04542 Sigma-70 region 2 KM400_19210 PF04539 Sigma-70 region 3 KM400_19210 PF04545 Sigma-70, region 4 KM400_19215 PF04542 Sigma-70 region 2 KM400_19215 PF04545 Sigma-70, region 4 KM400_19220 PF03419 Sporulation factor SpoIIGA KM400_19225 PF00091 Tubulin/FtsZ family, GTPase domain KM400_19225 PF12327 FtsZ family, C-terminal domain KM400_19230 PF02491 SHS2 domain inserted in FTSA KM400_19235 PF03799 Cell division protein FtsQ KM400_19235 PF08478 POTRA domain, FtsQ-type KM400_19240 PF01565 FAD binding domain KM400_19240 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KM400_19245 PF04101 Glycosyltransferase family 28 C-terminal domain KM400_19245 PF03033 Glycosyltransferase family 28 N-terminal domain KM400_19250 PF01098 Cell cycle protein KM400_19255 PF02875 Mur ligase family, glutamate ligase domain KM400_19255 PF08245 Mur ligase middle domain KM400_19260 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 KM400_19260 PF00953 Glycosyl transferase family 4 KM400_19265 PF01225 Mur ligase family, catalytic domain KM400_19265 PF02875 Mur ligase family, glutamate ligase domain KM400_19265 PF08245 Mur ligase middle domain KM400_19270 PF03793 PASTA domain KM400_19270 PF03717 Penicillin-binding Protein dimerisation domain KM400_19270 PF00905 Penicillin binding protein transpeptidase domain KM400_19275 PF03793 PASTA domain KM400_19275 PF03717 Penicillin-binding Protein dimerisation domain KM400_19275 PF00905 Penicillin binding protein transpeptidase domain KM400_19280 PF04977 Septum formation initiator KM400_19285 PF01795 MraW methylase family KM400_19290 PF10079 Bacillithiol biosynthesis BshC KM400_19295 PF02558 Ketopantoate reductase PanE/ApbA KM400_19295 PF08546 Ketopantoate reductase PanE/ApbA C terminal KM400_19300 PF00583 Acetyltransferase (GNAT) family KM400_19310 PF01783 Ribosomal L32p protein family KM400_19315 PF02620 Large ribosomal RNA subunit accumulation protein YceD KM400_19360 PF12123 N-acetylmuramoyl-l-alanine amidase KM400_19360 PF01510 N-acetylmuramoyl-L-alanine amidase KM400_19365 PF05105 Bacteriophage holin family KM400_19440 PF00574 Clp protease KM400_19450 PF03354 Phage Terminase KM400_19470 PF10137 Predicted nucleotide-binding protein containing TIR-like domain KM400_19475 PF00589 Phage integrase family KM400_19540 PF00692 dUTPase KM400_19555 PF04545 Sigma-70, region 4 KM400_19555 PF04539 Sigma-70 region 3 KM400_19555 PF04542 Sigma-70 region 2 KM400_19580 PF07319 Primosomal protein DnaI N-terminus KM400_19580 PF01695 IstB-like ATP binding protein KM400_19605 PF01381 Helix-turn-helix KM400_19620 PF01381 Helix-turn-helix KM400_19635 PF14659 Phage integrase, N-terminal SAM-like domain KM400_19635 PF00589 Phage integrase family KM400_19640 PF05636 HIGH Nucleotidyl Transferase KM400_19645 PF05362 Lon protease (S16) C-terminal proteolytic domain KM400_19645 PF13180 PDZ domain KM400_19650 PF01734 Patatin-like phospholipase KM400_19655 PF07670 Nucleoside recognition KM400_19660 PF01467 Cytidylyltransferase-like KM400_19675 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) KM400_19680 PF06133 Control of competence regulator ComK, YlbF/YmcA KM400_19685 PF00300 Histidine phosphatase superfamily (branch 1) KM400_19690 PF14003 YlbE-like protein KM400_19695 PF14071 Putative coat protein KM400_19700 PF00188 Cysteine-rich secretory protein family KM400_19700 PF14504 CAP-associated N-terminal KM400_19705 PF08868 YugN-like family KM400_19710 PF00795 Carbon-nitrogen hydrolase KM400_19715 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) KM400_19720 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KM400_19725 PF00510 Cytochrome c oxidase subunit III KM400_19730 PF00115 Cytochrome C and Quinol oxidase polypeptide I KM400_19735 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KM400_19735 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KM400_19735 PF00034 Cytochrome c KM400_19740 PF01040 UbiA prenyltransferase family KM400_19745 PF02628 Cytochrome oxidase assembly protein KM400_19750 PF02785 Biotin carboxylase C-terminal domain KM400_19750 PF00289 Biotin carboxylase, N-terminal domain KM400_19750 PF00364 Biotin-requiring enzyme KM400_19750 PF00682 HMGL-like KM400_19750 PF02436 Conserved carboxylase domain KM400_19750 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM400_19755 PF01098 Cell cycle protein KM400_19760 PF07408 Protein of unknown function (DUF1507) KM400_19770 PF02562 PhoH-like protein KM400_19770 PF13638 PIN domain KM400_19780 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) KM400_19790 PF14036 YlaH-like protein KM400_19795 PF03144 Elongation factor Tu domain 2 KM400_19795 PF00679 Elongation factor G C-terminus KM400_19795 PF14492 Elongation Factor G, domain II KM400_19795 PF00009 Elongation factor Tu GTP binding domain KM400_19805 PF00459 Inositol monophosphatase family KM400_19815 PF06335 Protein of unknown function (DUF1054) KM400_19820 PF05256 Uncharacterised protein family (UPF0223) KM400_19825 PF01276 Orn/Lys/Arg decarboxylase, major domain KM400_19825 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KM400_19865 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM400_19865 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM400_19870 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM400_19870 PF00364 Biotin-requiring enzyme KM400_19870 PF02817 e3 binding domain KM400_19875 PF02779 Transketolase, pyrimidine binding domain KM400_19875 PF02780 Transketolase, C-terminal domain KM400_19880 PF00676 Dehydrogenase E1 component KM400_19890 PF01327 Polypeptide deformylase KM400_19900 PF07288 Protein of unknown function (DUF1447) KM400_19905 PF00753 Metallo-beta-lactamase superfamily KM400_19905 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KM400_19905 PF17770 Ribonuclease J C-terminal domain KM400_19910 PF02254 TrkA-N domain KM400_19910 PF02080 TrkA-C domain KM400_19920 PF07687 Peptidase dimerisation domain KM400_19920 PF01546 Peptidase family M20/M25/M40 KM400_19925 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal KM400_19925 PF00132 Bacterial transferase hexapeptide (six repeats) KM400_19925 PF14602 Hexapeptide repeat of succinyl-transferase KM400_19930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM400_19930 PF03466 LysR substrate binding domain KM400_19945 PF04308 Ribonuclease H-like KM400_19955 PF08796 Protein of unknown function (DUF1797) KM400_19970 PF00563 EAL domain KM400_19970 PF10388 EAL-domain associated signalling protein domain KM400_19980 PF00149 Calcineurin-like phosphoesterase KM400_19980 PF10518 TAT (twin-arginine translocation) pathway signal sequence KM400_19995 PF02541 Ppx/GppA phosphatase family KM400_20000 PF14177 YkyB-like protein KM400_20025 PF07690 Major Facilitator Superfamily KM400_20035 PF08267 Cobalamin-independent synthase, N-terminal domain KM400_20035 PF01717 Cobalamin-independent synthase, Catalytic domain KM400_20045 PF14040 Deoxyribonuclease NucA/NucB KM400_20055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_20055 PF00512 His Kinase A (phospho-acceptor) domain KM400_20065 PF00155 Aminotransferase class I and II KM400_20070 PF00356 Bacterial regulatory proteins, lacI family KM400_20070 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KM400_20075 PF00528 Binding-protein-dependent transport system inner membrane component KM400_20080 PF00528 Binding-protein-dependent transport system inner membrane component KM400_20085 PF13416 Bacterial extracellular solute-binding protein KM400_20090 PF16657 Maltogenic Amylase, C-terminal domain KM400_20090 PF02903 Alpha amylase, N-terminal ig-like domain KM400_20090 PF00128 Alpha amylase, catalytic domain KM400_20095 PF00128 Alpha amylase, catalytic domain KM400_20095 PF16657 Maltogenic Amylase, C-terminal domain KM400_20100 PF00005 ABC transporter KM400_20100 PF17912 MalK OB fold domain KM400_20100 PF03459 TOBE domain KM400_20140 PF02803 Thiolase, C-terminal domain KM400_20140 PF00108 Thiolase, N-terminal domain KM400_20145 PF00293 NUDIX domain KM400_20175 PF03551 Transcriptional regulator PadR-like family KM400_20190 PF01008 Initiation factor 2 subunit family KM400_20195 PF01636 Phosphotransferase enzyme family KM400_20200 PF00795 Carbon-nitrogen hydrolase KM400_20205 PF00155 Aminotransferase class I and II KM400_20210 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain KM400_20210 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain KM400_20220 PF00596 Class II Aldolase and Adducin N-terminal domain KM400_20225 PF03079 ARD/ARD' family KM400_20245 PF08448 PAS fold KM400_20245 PF00990 Diguanylate cyclase, GGDEF domain KM400_20250 PF00881 Nitroreductase family KM400_20265 PF05524 PEP-utilising enzyme, N-terminal KM400_20265 PF00391 PEP-utilising enzyme, mobile domain KM400_20265 PF02896 PEP-utilising enzyme, TIM barrel domain KM400_20270 PF00381 PTS HPr component phosphorylation site KM400_20275 PF02378 Phosphotransferase system, EIIC KM400_20275 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KM400_20275 PF00367 phosphotransferase system, EIIB KM400_20280 PF03123 CAT RNA binding domain KM400_20280 PF00874 PRD domain KM400_20290 PF00392 Bacterial regulatory proteins, gntR family KM400_20290 PF07702 UTRA domain KM400_20295 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase KM400_20300 PF01979 Amidohydrolase family KM400_20310 PF04079 Segregation and condensation complex subunit ScpB KM400_20315 PF02616 Segregation and condensation protein ScpA KM400_20325 PF03745 Domain of unknown function (DUF309) KM400_20330 PF00583 Acetyltransferase (GNAT) family KM400_20335 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KM400_20340 PF06207 Protein of unknown function (DUF1002) KM400_20350 PF03323 Bacillus/Clostridium GerA spore germination protein KM400_20355 PF14097 Stage V sporulation protein AE1 KM400_20360 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KM400_20365 PF07451 Stage V sporulation protein AD (SpoVAD) KM400_20370 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KM400_20375 PF13782 Stage V sporulation protein AB KM400_20380 PF12164 Stage V sporulation protein AA KM400_20390 PF00209 Sodium:neurotransmitter symporter family KM400_20395 PF04542 Sigma-70 region 2 KM400_20395 PF04545 Sigma-70, region 4 KM400_20395 PF04539 Sigma-70 region 3 KM400_20400 PF13581 Histidine kinase-like ATPase domain KM400_20405 PF01740 STAS domain KM400_20410 PF00768 D-alanyl-D-alanine carboxypeptidase KM400_20410 PF07943 Penicillin-binding protein 5, C-terminal domain KM400_20415 PF00392 Bacterial regulatory proteins, gntR family KM400_20420 PF00005 ABC transporter KM400_20435 PF01047 MarR family KM400_20445 PF00860 Permease family KM400_20450 PF01544 CorA-like Mg2+ transporter protein KM400_20455 PF02885 Glycosyl transferase family, helical bundle domain KM400_20455 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain KM400_20455 PF00591 Glycosyl transferase family, a/b domain KM400_20460 PF01048 Phosphorylase superfamily KM400_20465 PF01676 Metalloenzyme superfamily KM400_20475 PF02899 Phage integrase, N-terminal SAM-like domain KM400_20475 PF00589 Phage integrase family KM400_20480 PF14004 Protein of unknown function (DUF4227) KM400_20485 PF01475 Ferric uptake regulator family KM400_20490 PF01944 Stage II sporulation protein M KM400_20500 PF00293 NUDIX domain KM400_20505 PF13072 Mother cell inhibitor of FtsZ KM400_20510 PF00248 Aldo/keto reductase family KM400_20515 PF00248 Aldo/keto reductase family KM400_20520 PF13673 Acetyltransferase (GNAT) domain KM400_20520 PF04229 GrpB protein KM400_20530 PF00565 Staphylococcal nuclease homologue KM400_20530 PF00149 Calcineurin-like phosphoesterase KM400_20530 PF00746 LPXTG cell wall anchor motif KM400_20530 PF02872 5'-nucleotidase, C-terminal domain KM400_20540 PF12146 Serine aminopeptidase, S33 KM400_20545 PF13726 Na+-H+ antiporter family KM400_20545 PF03553 Na+/H+ antiporter family KM400_20550 PF00356 Bacterial regulatory proteins, lacI family KM400_20555 PF00583 Acetyltransferase (GNAT) family KM400_20560 PF12146 Serine aminopeptidase, S33 KM400_20565 PF10827 Protein of unknown function (DUF2552) KM400_20575 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM400_20575 PF01872 RibD C-terminal domain KM400_20580 PF00677 Lumazine binding domain KM400_20585 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KM400_20585 PF00925 GTP cyclohydrolase II KM400_20590 PF00885 6,7-dimethyl-8-ribityllumazine synthase KM400_20600 PF04055 Radical SAM superfamily KM400_20600 PF06968 Biotin and Thiamin Synthesis associated domain KM400_20605 PF13847 Methyltransferase domain KM400_20610 PF08241 Methyltransferase domain KM400_20610 PF12697 Alpha/beta hydrolase family KM400_20615 PF00155 Aminotransferase class I and II KM400_20625 PF00202 Aminotransferase class-III KM400_20635 PF03553 Na+/H+ antiporter family KM400_20640 PF00149 Calcineurin-like phosphoesterase KM400_20640 PF02872 5'-nucleotidase, C-terminal domain KM400_20650 PF13404 AsnC-type helix-turn-helix domain KM400_20650 PF01037 Lrp/AsnC ligand binding domain KM400_20665 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KM400_20665 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KM400_20670 PF00202 Aminotransferase class-III KM400_20675 PF00696 Amino acid kinase family KM400_20680 PF01960 ArgJ family KM400_20685 PF02774 Semialdehyde dehydrogenase, dimerisation domain KM400_20685 PF01118 Semialdehyde dehydrogenase, NAD binding domain KM400_20695 PF00106 short chain dehydrogenase KM400_20700 PF00753 Metallo-beta-lactamase superfamily KM400_20705 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM400_20705 PF03807 NADP oxidoreductase coenzyme F420-dependent KM400_20710 PF03313 Serine dehydratase alpha chain KM400_20715 PF01842 ACT domain KM400_20715 PF03315 Serine dehydratase beta chain KM400_20725 PF00753 Metallo-beta-lactamase superfamily KM400_20725 PF12706 Beta-lactamase superfamily domain KM400_20735 PF00817 impB/mucB/samB family KM400_20735 PF11799 impB/mucB/samB family C-terminal domain KM400_20735 PF11798 IMS family HHH motif KM400_20745 PF01546 Peptidase family M20/M25/M40 KM400_20745 PF07687 Peptidase dimerisation domain KM400_20750 PF13302 Acetyltransferase (GNAT) domain KM400_20765 PF03734 L,D-transpeptidase catalytic domain KM400_20770 PF11728 Putative aromatic acid exporter C-terminal domain KM400_20770 PF06081 Aromatic acid exporter family member 1 KM400_20775 PF00005 ABC transporter KM400_20780 PF00528 Binding-protein-dependent transport system inner membrane component KM400_20785 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM400_20790 PF06491 Disulphide isomerase KM400_20795 PF11208 Protein of unknown function (DUF2992) KM400_20800 PF09297 NADH pyrophosphatase zinc ribbon domain KM400_20800 PF00293 NUDIX domain KM400_20805 PF01098 Cell cycle protein KM400_20810 PF00364 Biotin-requiring enzyme KM400_20810 PF02817 e3 binding domain KM400_20810 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM400_20815 PF02780 Transketolase, C-terminal domain KM400_20815 PF02779 Transketolase, pyrimidine binding domain KM400_20820 PF00676 Dehydrogenase E1 component KM400_20825 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM400_20825 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM400_20830 PF00871 Acetokinase family KM400_20835 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KM400_20835 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KM400_20840 PF01515 Phosphate acetyl/butaryl transferase KM400_20845 PF00158 Sigma-54 interaction domain KM400_20845 PF02954 Bacterial regulatory protein, Fis family KM400_20845 PF00989 PAS fold KM400_20855 PF03009 Glycerophosphoryl diester phosphodiesterase family KM400_20860 PF14174 YycC-like protein KM400_20870 PF00072 Response regulator receiver domain KM400_20870 PF08769 Sporulation initiation factor Spo0A C terminal KM400_20875 PF05580 SpoIVB peptidase S55 KM400_20875 PF17820 PDZ domain KM400_20880 PF13476 AAA domain KM400_20885 PF01316 Arginine repressor, DNA binding domain KM400_20885 PF02863 Arginine repressor, C-terminal domain KM400_20890 PF01479 S4 domain KM400_20890 PF01728 FtsJ-like methyltransferase KM400_20895 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KM400_20895 PF02779 Transketolase, pyrimidine binding domain KM400_20895 PF02780 Transketolase, C-terminal domain KM400_20900 PF00348 Polyprenyl synthetase KM400_20905 PF02609 Exonuclease VII small subunit KM400_20910 PF02601 Exonuclease VII, large subunit KM400_20910 PF13742 OB-fold nucleic acid binding domain KM400_20915 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KM400_20915 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KM400_20920 PF01029 NusB family KM400_20925 PF03780 Asp23 family, cell envelope-related function KM400_20930 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM400_20930 PF00289 Biotin carboxylase, N-terminal domain KM400_20930 PF02785 Biotin carboxylase C-terminal domain KM400_20935 PF00364 Biotin-requiring enzyme KM400_20945 PF12685 SpoIIIAH-like protein KM400_20955 PF09581 Stage III sporulation protein AF (Spore_III_AF) KM400_20960 PF09546 Stage III sporulation protein AE (spore_III_AE) KM400_20965 PF06686 Stage III sporulation protein AC/AD protein family KM400_20970 PF06686 Stage III sporulation protein AC/AD protein family KM400_20975 PF09548 Stage III sporulation protein AB (spore_III_AB) KM400_21000 PF08207 Elongation factor P (EF-P) KOW-like domain KM400_21000 PF01132 Elongation factor P (EF-P) OB domain KM400_21000 PF09285 Elongation factor P, C-terminal KM400_21005 PF00557 Metallopeptidase family M24 KM400_21005 PF01321 Creatinase/Prolidase N-terminal domain KM400_21010 PF01220 Dehydroquinase class II KM400_21015 PF11085 Conserved membrane protein YqhR KM400_21020 PF07136 Protein of unknown function (DUF1385) KM400_21030 PF13419 Haloacid dehalogenase-like hydrolase KM400_21035 PF02742 Iron dependent repressor, metal binding and dimerisation domain KM400_21035 PF01325 Iron dependent repressor, N-terminal DNA binding domain KM400_21050 PF03099 Biotin/lipoate A/B protein ligase family KM400_21055 PF00581 Rhodanese-like domain KM400_21060 PF00356 Bacterial regulatory proteins, lacI family KM400_21060 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KM400_21070 PF00893 Small Multidrug Resistance protein KM400_21075 PF00893 Small Multidrug Resistance protein KM400_21110 PF00005 ABC transporter KM400_21115 PF00392 Bacterial regulatory proteins, gntR family KM400_21130 PF02347 Glycine cleavage system P-protein KM400_21135 PF02347 Glycine cleavage system P-protein KM400_21140 PF01571 Aminomethyltransferase folate-binding domain KM400_21140 PF08669 Glycine cleavage T-protein C-terminal barrel domain KM400_21145 PF00271 Helicase conserved C-terminal domain KM400_21145 PF00176 SNF2 family N-terminal domain KM400_21150 PF11079 Bacterial protein YqhG of unknown function KM400_21170 PF14038 YqzE-like protein KM400_21175 PF01202 Shikimate kinase KM400_21200 PF07963 Prokaryotic N-terminal methylation motif KM400_21210 PF00482 Type II secretion system (T2SS), protein F KM400_21215 PF00437 Type II/IV secretion system protein KM400_21225 PF11117 Protein of unknown function (DUF2626) KM400_21230 PF00375 Sodium:dicarboxylate symporter family KM400_21265 PF04101 Glycosyltransferase family 28 C-terminal domain KM400_21265 PF03033 Glycosyltransferase family 28 N-terminal domain KM400_21275 PF02219 Methylenetetrahydrofolate reductase KM400_21275 PF02574 Homocysteine S-methyltransferase KM400_21280 PF01053 Cys/Met metabolism PLP-dependent enzyme KM400_21285 PF01053 Cys/Met metabolism PLP-dependent enzyme KM400_21295 PF01022 Bacterial regulatory protein, arsR family KM400_21305 PF00753 Metallo-beta-lactamase superfamily KM400_21310 PF10958 Protein of unknown function (DUF2759) KM400_21315 PF00480 ROK family KM400_21320 PF06014 Bacterial protein of unknown function (DUF910) KM400_21325 PF01812 5-formyltetrahydrofolate cyclo-ligase family KM400_21330 PF00471 Ribosomal protein L33 KM400_21335 PF00483 Nucleotidyl transferase KM400_21340 PF01895 PhoU domain KM400_21345 PF00005 ABC transporter KM400_21350 PF00528 Binding-protein-dependent transport system inner membrane component KM400_21355 PF00528 Binding-protein-dependent transport system inner membrane component KM400_21360 PF12849 PBP superfamily domain KM400_21365 PF00905 Penicillin binding protein transpeptidase domain KM400_21365 PF03717 Penicillin-binding Protein dimerisation domain KM400_21370 PF07690 Major Facilitator Superfamily KM400_21375 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KM400_21375 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KM400_21395 PF04551 GcpE protein KM400_21400 PF01475 Ferric uptake regulator family KM400_21405 PF00950 ABC 3 transport family KM400_21410 PF00005 ABC transporter KM400_21415 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM400_21415 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM400_21420 PF11116 Protein of unknown function (DUF2624) KM400_21425 PF01261 Xylose isomerase-like TIM barrel KM400_21430 PF00270 DEAD/DEAH box helicase KM400_21430 PF00271 Helicase conserved C-terminal domain KM400_21440 PF02401 LytB protein KM400_21445 PF01784 NIF3 (NGG1p interacting factor 3) KM400_21450 PF04816 tRNA (adenine(22)-N(1))-methyltransferase KM400_21455 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KM400_21460 PF03979 Sigma-70 factor, region 1.1 KM400_21460 PF00140 Sigma-70 factor, region 1.2 KM400_21460 PF04542 Sigma-70 region 2 KM400_21460 PF04539 Sigma-70 region 3 KM400_21460 PF04545 Sigma-70, region 4 KM400_21465 PF01807 CHC2 zinc finger KM400_21465 PF08275 DNA primase catalytic core, N-terminal domain KM400_21465 PF10410 DnaB-helicase binding domain of primase KM400_21475 PF03618 Kinase/pyrophosphorylase KM400_21480 PF00571 CBS domain KM400_21480 PF08279 HTH domain KM400_21485 PF02565 Recombination protein O C terminal KM400_21485 PF11967 Recombination protein O N terminal KM400_21495 PF07650 KH domain KM400_21495 PF01926 50S ribosome-binding GTPase KM400_21500 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM400_21505 PF01219 Prokaryotic diacylglycerol kinase KM400_21510 PF02130 Uncharacterized protein family UPF0054 KM400_21515 PF07697 7TM-HD extracellular KM400_21515 PF07698 7TM receptor with intracellular HD hydrolase KM400_21515 PF01966 HD domain KM400_21520 PF02562 PhoH-like protein KM400_21525 PF06898 Putative stage IV sporulation protein YqfD KM400_21530 PF07873 YabP family KM400_21535 PF09424 Yqey-like protein KM400_21540 PF01165 Ribosomal protein S21 KM400_21545 PF01938 TRAM domain KM400_21545 PF04055 Radical SAM superfamily KM400_21545 PF00919 Uncharacterized protein family UPF0004 KM400_21550 PF04452 RNA methyltransferase KM400_21560 PF00226 DnaJ domain KM400_21560 PF01556 DnaJ C terminal domain KM400_21560 PF00684 DnaJ central domain KM400_21565 PF00012 Hsp70 protein KM400_21570 PF01025 GrpE KM400_21575 PF01628 HrcA protein C terminal domain KM400_21580 PF04055 Radical SAM superfamily KM400_21580 PF06969 HemN C-terminal domain KM400_21585 PF01638 HxlR-like helix-turn-helix KM400_21590 PF06421 GTP-binding protein LepA C-terminus KM400_21590 PF00009 Elongation factor Tu GTP binding domain KM400_21590 PF00679 Elongation factor G C-terminus KM400_21590 PF03144 Elongation factor Tu domain 2 KM400_21600 PF03418 Germination protease KM400_21605 PF01649 Ribosomal protein S20 KM400_21610 PF06144 DNA polymerase III, delta subunit KM400_21615 PF14141 YqzM-like protein KM400_21620 PF13567 Domain of unknown function (DUF4131) KM400_21620 PF00753 Metallo-beta-lactamase superfamily KM400_21620 PF03772 Competence protein KM400_21625 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM400_21630 PF10531 SLBB domain KM400_21635 PF03807 NADP oxidoreductase coenzyme F420-dependent KM400_21635 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM400_21640 PF13649 Methyltransferase domain KM400_21650 PF01966 HD domain KM400_21655 PF01467 Cytidylyltransferase-like KM400_21660 PF01985 CRS1 / YhbY (CRM) domain KM400_21665 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KM400_21665 PF08501 Shikimate dehydrogenase substrate binding domain KM400_21665 PF01488 Shikimate / quinate 5-dehydrogenase KM400_21670 PF01926 50S ribosome-binding GTPase KM400_21685 PF02666 Phosphatidylserine decarboxylase KM400_21690 PF04545 Sigma-70, region 4 KM400_21690 PF04542 Sigma-70 region 2 KM400_21700 PF16244 Domain of unknown function (DUF4901) KM400_21705 PF00471 Ribosomal protein L33 KM400_21710 PF00881 Nitroreductase family KM400_21715 PF04607 Region found in RelA / SpoT proteins KM400_21725 PF00245 Alkaline phosphatase KM400_21735 PF00561 alpha/beta hydrolase fold KM400_21735 PF08386 TAP-like protein KM400_21770 PF05922 Peptidase inhibitor I9 KM400_21770 PF02225 PA domain KM400_21770 PF13860 FlgD Ig-like domain KM400_21770 PF00082 Subtilase family KM400_21775 PF00351 Biopterin-dependent aromatic amino acid hydroxylase KM400_21785 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM400_21790 PF07681 DoxX KM400_21820 PF00005 ABC transporter KM400_21825 PF01032 FecCD transport family KM400_21830 PF01497 Periplasmic binding protein KM400_21835 PF14143 YrhC-like protein KM400_21840 PF00171 Aldehyde dehydrogenase family KM400_21840 PF00465 Iron-containing alcohol dehydrogenase KM400_21845 PF01053 Cys/Met metabolism PLP-dependent enzyme KM400_21850 PF00291 Pyridoxal-phosphate dependent enzyme KM400_21855 PF01048 Phosphorylase superfamily KM400_21860 PF08241 Methyltransferase domain KM400_21875 PF03717 Penicillin-binding Protein dimerisation domain KM400_21875 PF00905 Penicillin binding protein transpeptidase domain KM400_21880 PF01272 Transcription elongation factor, GreA/GreB, C-term KM400_21880 PF03449 Transcription elongation factor, N-terminal KM400_21885 PF00485 Phosphoribulokinase / Uridine kinase family KM400_21890 PF01136 Peptidase family U32 KM400_21890 PF16325 Peptidase family U32 C-terminal domain KM400_21895 PF01136 Peptidase family U32 KM400_21900 PF01596 O-methyltransferase KM400_21905 PF02618 YceG-like family KM400_21910 PF06949 Protein of unknown function (DUF1292) KM400_21915 PF03652 Holliday junction resolvase KM400_21920 PF06135 IreB regulatory phosphoprotein KM400_21925 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM400_21925 PF01411 tRNA synthetases class II (A) KM400_21925 PF02272 DHHA1 domain KM400_21935 PF01594 AI-2E family transporter KM400_21955 PF14490 Helix-hairpin-helix containing domain KM400_21955 PF13538 UvrD-like helicase C-terminal domain KM400_21955 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain KM400_21970 PF00266 Aminotransferase class-V KM400_21975 PF02082 Transcriptional regulator KM400_21980 PF16193 AAA C-terminal domain KM400_21980 PF12002 MgsA AAA+ ATPase C terminal KM400_21980 PF05496 Holliday junction DNA helicase RuvB P-loop domain KM400_21990 PF00899 ThiF family KM400_21995 PF01336 OB-fold nucleic acid binding domain KM400_21995 PF00152 tRNA synthetases class II (D, K and N) KM400_21995 PF02938 GAD domain KM400_22000 PF13393 Histidyl-tRNA synthetase KM400_22000 PF03129 Anticodon binding domain KM400_22010 PF02580 D-Tyr-tRNA(Tyr) deacylase KM400_22015 PF13291 ACT domain KM400_22015 PF04607 Region found in RelA / SpoT proteins KM400_22015 PF02824 TGS domain KM400_22020 PF00156 Phosphoribosyl transferase domain KM400_22025 PF10141 Single-strand DNA-specific exonuclease, C terminal domain KM400_22025 PF17768 RecJ OB domain KM400_22025 PF02272 DHHA1 domain KM400_22025 PF01368 DHH family KM400_22030 PF01545 Cation efflux family KM400_22030 PF16916 Dimerisation domain of Zinc Transporter KM400_22035 PF02355 Protein export membrane protein KM400_22035 PF07549 SecD/SecF GG Motif KM400_22040 PF13797 Post-transcriptional regulator KM400_22045 PF14667 Polysaccharide biosynthesis C-terminal domain KM400_22045 PF01943 Polysaccharide biosynthesis protein KM400_22050 PF04239 Protein of unknown function (DUF421) KM400_22060 PF02699 Preprotein translocase subunit KM400_22065 PF01702 Queuine tRNA-ribosyltransferase KM400_22070 PF02547 Queuosine biosynthesis protein KM400_22075 PF11146 Protein of unknown function (DUF2905) KM400_22080 PF05491 RuvB C-terminal winged helix domain KM400_22080 PF05496 Holliday junction DNA helicase RuvB P-loop domain KM400_22080 PF17864 RuvB AAA lid domain KM400_22085 PF01330 RuvA N terminal domain KM400_22085 PF07499 RuvA, C-terminal domain KM400_22090 PF01497 Periplasmic binding protein KM400_22100 PF00892 EamA-like transporter family KM400_22105 PF00892 EamA-like transporter family KM400_22110 PF01022 Bacterial regulatory protein, arsR family KM400_22125 PF01476 LysM domain KM400_22130 PF02445 Quinolinate synthetase A protein KM400_22135 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KM400_22135 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KM400_22140 PF00890 FAD binding domain KM400_22140 PF02910 Fumarate reductase flavoprotein C-term KM400_22145 PF00266 Aminotransferase class-V KM400_22150 PF02829 3H domain KM400_22150 PF08279 HTH domain KM400_22155 PF03475 3-alpha domain KM400_22155 PF03473 MOSC domain KM400_22160 PF01842 ACT domain KM400_22160 PF00800 Prephenate dehydratase KM400_22165 PF02687 FtsX-like permease family KM400_22170 PF02687 FtsX-like permease family KM400_22175 PF00005 ABC transporter KM400_22185 PF00486 Transcriptional regulatory protein, C terminal KM400_22185 PF00072 Response regulator receiver domain KM400_22190 PF01926 50S ribosome-binding GTPase KM400_22190 PF01018 GTP1/OBG KM400_22190 PF09269 Domain of unknown function (DUF1967) KM400_22195 PF14682 Sporulation initiation phospho-transferase B, C-terminal KM400_22195 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KM400_22200 PF01016 Ribosomal L27 protein KM400_22205 PF04327 Cysteine protease Prp KM400_22210 PF00829 Ribosomal prokaryotic L21 protein KM400_22215 PF10150 Ribonuclease E/G family KM400_22215 PF00575 S1 RNA binding domain KM400_22220 PF02163 Peptidase family M50 KM400_22225 PF01551 Peptidase family M23 KM400_22230 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KM400_22235 PF03775 Septum formation inhibitor MinC, C-terminal domain KM400_22245 PF04085 rod shape-determining protein MreC KM400_22255 PF04002 RadC-like JAB domain KM400_22260 PF02545 Maf-like protein KM400_22270 PF02875 Mur ligase family, glutamate ligase domain KM400_22270 PF08245 Mur ligase middle domain KM400_22275 PF10458 Valyl tRNA synthetase tRNA binding arm KM400_22275 PF08264 Anticodon-binding domain of tRNA KM400_22275 PF00133 tRNA synthetases class I (I, L, M and V) KM400_22285 PF01476 LysM domain KM400_22290 PF00202 Aminotransferase class-III KM400_22295 PF00490 Delta-aminolevulinic acid dehydratase KM400_22300 PF02602 Uroporphyrinogen-III synthase HemD KM400_22305 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KM400_22305 PF03900 Porphobilinogen deaminase, C-terminal domain KM400_22310 PF01578 Cytochrome C assembly protein KM400_22315 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KM400_22315 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KM400_22315 PF01488 Shikimate / quinate 5-dehydrogenase KM400_22320 PF01047 MarR family KM400_22325 PF02566 OsmC-like protein KM400_22330 PF01926 50S ribosome-binding GTPase KM400_22335 PF00004 ATPase family associated with various cellular activities (AAA) KM400_22335 PF05362 Lon protease (S16) C-terminal proteolytic domain KM400_22335 PF02190 ATP-dependent protease La (LON) substrate-binding domain KM400_22340 PF00004 ATPase family associated with various cellular activities (AAA) KM400_22340 PF05362 Lon protease (S16) C-terminal proteolytic domain KM400_22345 PF10431 C-terminal, D2-small domain, of ClpB protein KM400_22345 PF06689 ClpX C4-type zinc finger KM400_22345 PF07724 AAA domain (Cdc48 subfamily) KM400_22350 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KM400_22350 PF05698 Bacterial trigger factor protein (TF) C-terminus KM400_22350 PF05697 Bacterial trigger factor protein (TF) KM400_22365 PF08000 Bacterial PH domain KM400_22365 PF11724 YvbH-like oligomerisation region KM400_22385 PF12850 Calcineurin-like phosphoesterase superfamily domain KM400_22390 PF01725 Ham1 family KM400_22395 PF01138 3' exoribonuclease family, domain 1 KM400_22395 PF03725 3' exoribonuclease family, domain 2 KM400_22400 PF10646 Sporulation and spore germination KM400_22405 PF01177 Asp/Glu/Hydantoin racemase KM400_22410 PF07690 Major Facilitator Superfamily KM400_22420 PF00440 Bacterial regulatory proteins, tetR family KM400_22435 PF00196 Bacterial regulatory proteins, luxR family KM400_22440 PF00860 Permease family KM400_22450 PF07969 Amidohydrolase family KM400_22455 PF07969 Amidohydrolase family KM400_22460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM400_22465 PF12911 N-terminal TM domain of oligopeptide transport permease C KM400_22465 PF00528 Binding-protein-dependent transport system inner membrane component KM400_22470 PF00528 Binding-protein-dependent transport system inner membrane component KM400_22475 PF00005 ABC transporter KM400_22475 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM400_22480 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM400_22480 PF00005 ABC transporter KM400_22485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_22485 PF07694 5TMR of 5TMR-LYT KM400_22485 PF06580 Histidine kinase KM400_22490 PF00072 Response regulator receiver domain KM400_22490 PF04397 LytTr DNA-binding domain KM400_22505 PF04024 PspC domain KM400_22510 PF07883 Cupin domain KM400_22510 PF01381 Helix-turn-helix KM400_22515 PF13536 Putative multidrug resistance efflux transporter KM400_22520 PF00230 Major intrinsic protein KM400_22525 PF02082 Transcriptional regulator KM400_22535 PF00005 ABC transporter KM400_22535 PF13732 Domain of unknown function (DUF4162) KM400_22540 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) KM400_22550 PF01618 MotA/TolQ/ExbB proton channel family KM400_22555 PF02557 D-alanyl-D-alanine carboxypeptidase KM400_22560 PF03061 Thioesterase superfamily KM400_22565 PF13085 2Fe-2S iron-sulfur cluster binding domain KM400_22565 PF13183 4Fe-4S dicluster domain KM400_22570 PF02910 Fumarate reductase flavoprotein C-term KM400_22570 PF00890 FAD binding domain KM400_22575 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KM400_22580 PF10702 Protein of unknown function (DUF2507) KM400_22585 PF08459 UvrC Helix-hairpin-helix N-terminal KM400_22585 PF02151 UvrB/uvrC motif KM400_22585 PF01541 GIY-YIG catalytic domain KM400_22590 PF00085 Thioredoxin KM400_22595 PF00766 Electron transfer flavoprotein FAD-binding domain KM400_22595 PF01012 Electron transfer flavoprotein domain KM400_22600 PF01012 Electron transfer flavoprotein domain KM400_22605 PF00378 Enoyl-CoA hydratase/isomerase KM400_22610 PF08359 YsiA-like protein, C-terminal region KM400_22610 PF00440 Bacterial regulatory proteins, tetR family KM400_22615 PF13193 AMP-binding enzyme C-terminal domain KM400_22615 PF00501 AMP-binding enzyme KM400_22625 PF01497 Periplasmic binding protein KM400_22630 PF01032 FecCD transport family KM400_22635 PF05163 DinB family KM400_22665 PF00005 ABC transporter KM400_22670 PF00512 His Kinase A (phospho-acceptor) domain KM400_22670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_22675 PF00072 Response regulator receiver domain KM400_22675 PF00486 Transcriptional regulatory protein, C terminal KM400_22685 PF09962 Uncharacterized conserved protein (DUF2196) KM400_22690 PF17785 PUA-like domain KM400_22690 PF10672 S-adenosylmethionine-dependent methyltransferase KM400_22700 PF03992 Antibiotic biosynthesis monooxygenase KM400_22705 PF04203 Sortase domain KM400_22710 PF00005 ABC transporter KM400_22715 PF01032 FecCD transport family KM400_22720 PF01497 Periplasmic binding protein KM400_22725 PF05031 Iron Transport-associated domain KM400_22735 PF05031 Iron Transport-associated domain KM400_22740 PF05525 Branched-chain amino acid transport protein KM400_22745 PF00849 RNA pseudouridylate synthase KM400_22745 PF01479 S4 domain KM400_22750 PF01713 Smr domain KM400_22750 PF00488 MutS domain V KM400_22755 PF14791 DNA polymerase beta thumb KM400_22755 PF02811 PHP domain KM400_22755 PF14716 Helix-hairpin-helix domain KM400_22760 PF02674 Colicin V production protein KM400_22765 PF05164 Cell division protein ZapA KM400_22770 PF11858 Domain of unknown function (DUF3378) KM400_22770 PF01351 Ribonuclease HII KM400_22790 PF00152 tRNA synthetases class II (D, K and N) KM400_22790 PF01336 OB-fold nucleic acid binding domain KM400_22795 PF03483 B3/4 domain KM400_22795 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KM400_22795 PF01588 Putative tRNA binding domain KM400_22795 PF03147 Ferredoxin-fold anticodon binding domain KM400_22795 PF03484 tRNA synthetase B5 domain KM400_22800 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KM400_22800 PF01409 tRNA synthetases class II core domain (F) KM400_22805 PF08032 RNA 2'-O ribose methyltransferase substrate binding KM400_22805 PF00588 SpoU rRNA Methylase family KM400_22810 PF14098 Small, acid-soluble spore protein I KM400_22815 PF01966 HD domain KM400_22840 PF07690 Major Facilitator Superfamily KM400_22850 PF16859 Tetracyclin repressor-like, C-terminal domain KM400_22850 PF00440 Bacterial regulatory proteins, tetR family KM400_22855 PF05343 M42 glutamyl aminopeptidase KM400_22865 PF00453 Ribosomal protein L20 KM400_22870 PF01632 Ribosomal protein L35 KM400_22875 PF05198 Translation initiation factor IF-3, N-terminal domain KM400_22875 PF00707 Translation initiation factor IF-3, C-terminal domain KM400_22880 PF03129 Anticodon binding domain KM400_22880 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM400_22880 PF02824 TGS domain KM400_22880 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM400_22885 PF08812 YtxC-like family KM400_22890 PF01695 IstB-like ATP binding protein KM400_22890 PF07319 Primosomal protein DnaI N-terminus KM400_22895 PF07261 Replication initiation and membrane attachment KM400_22900 PF03477 ATP cone domain KM400_22905 PF02675 S-adenosylmethionine decarboxylase KM400_22910 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KM400_22910 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KM400_22915 PF01121 Dephospho-CoA kinase KM400_22920 PF02659 Putative manganese efflux pump KM400_22925 PF06827 Zinc finger found in FPG and IleRS KM400_22925 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KM400_22925 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KM400_22930 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KM400_22930 PF01367 5'-3' exonuclease, C-terminal SAM fold KM400_22930 PF00476 DNA polymerase family A KM400_22935 PF16736 Single Cache-like KM400_22935 PF00989 PAS fold KM400_22935 PF00512 His Kinase A (phospho-acceptor) domain KM400_22935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_22940 PF00072 Response regulator receiver domain KM400_22940 PF00486 Transcriptional regulatory protein, C terminal KM400_22955 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KM400_22955 PF00056 lactate/malate dehydrogenase, NAD binding domain KM400_22960 PF00180 Isocitrate/isopropylmalate dehydrogenase KM400_22965 PF00285 Citrate synthase, C-terminal domain KM400_22970 PF04284 Protein of unknown function (DUF441) KM400_22975 PF01594 AI-2E family transporter KM400_22980 PF04186 FxsA cytoplasmic membrane protein KM400_22985 PF00391 PEP-utilising enzyme, mobile domain KM400_22985 PF00224 Pyruvate kinase, barrel domain KM400_22985 PF02887 Pyruvate kinase, alpha/beta domain KM400_22990 PF00365 Phosphofructokinase KM400_22995 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KM400_23000 PF01039 Carboxyl transferase domain KM400_23000 PF17848 Acetyl-coA carboxylase zinc finger domain KM400_23005 PF00392 Bacterial regulatory proteins, gntR family KM400_23010 PF00390 Malic enzyme, N-terminal domain KM400_23010 PF03949 Malic enzyme, NAD binding domain KM400_23015 PF01336 OB-fold nucleic acid binding domain KM400_23015 PF02811 PHP domain KM400_23015 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KM400_23015 PF14579 Helix-hairpin-helix motif KM400_23015 PF07733 Bacterial DNA polymerase III alpha NTPase domain KM400_23020 PF14034 Sporulation protein YtrH KM400_23030 PF02272 DHHA1 domain KM400_23030 PF01368 DHH family KM400_23035 PF14007 YtpI-like protein KM400_23050 PF00392 Bacterial regulatory proteins, gntR family KM400_23050 PF07085 DRTGG domain KM400_23050 PF00571 CBS domain KM400_23050 PF03061 Thioesterase superfamily KM400_23065 PF00557 Metallopeptidase family M24 KM400_23065 PF01321 Creatinase/Prolidase N-terminal domain KM400_23070 PF11518 Protein of unknown function (DUF3221) KM400_23100 PF12746 GNAT acetyltransferase KM400_23105 PF07883 Cupin domain KM400_23115 PF01381 Helix-turn-helix KM400_23125 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KM400_23125 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KM400_23135 PF00582 Universal stress protein family KM400_23155 PF14698 Argininosuccinate lyase C-terminal KM400_23155 PF00206 Lyase KM400_23160 PF00764 Arginosuccinate synthase KM400_23175 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM400_23175 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM400_23180 PF12787 EcsC protein family KM400_23195 PF00871 Acetokinase family KM400_23200 PF02384 N-6 DNA Methylase KM400_23205 PF08534 Redoxin KM400_23210 PF09579 Sporulation protein YtfJ (Spore_YtfJ) KM400_23220 PF01513 ATP-NAD kinase KM400_23225 PF07969 Amidohydrolase family KM400_23235 PF00501 AMP-binding enzyme KM400_23235 PF13193 AMP-binding enzyme C-terminal domain KM400_23240 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM400_23245 PF02926 THUMP domain KM400_23245 PF02568 Thiamine biosynthesis protein (ThiI) KM400_23250 PF00266 Aminotransferase class-V KM400_23255 PF06160 Septation ring formation regulator, EzrA KM400_23260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM400_23260 PF03466 LysR substrate binding domain KM400_23265 PF00892 EamA-like transporter family KM400_23275 PF13185 GAF domain KM400_23280 PF01053 Cys/Met metabolism PLP-dependent enzyme KM400_23285 PF01479 S4 domain KM400_23285 PF00163 Ribosomal protein S4/S9 N-terminal domain KM400_23300 PF01479 S4 domain KM400_23300 PF00579 tRNA synthetases class I (W and Y) KM400_23310 PF04542 Sigma-70 region 2 KM400_23310 PF08281 Sigma-70, region 4 KM400_23320 PF13193 AMP-binding enzyme C-terminal domain KM400_23320 PF00501 AMP-binding enzyme KM400_23325 PF00583 Acetyltransferase (GNAT) family KM400_23330 PF00571 CBS domain KM400_23335 PF00850 Histone deacetylase domain KM400_23345 PF00072 Response regulator receiver domain KM400_23345 PF00486 Transcriptional regulatory protein, C terminal KM400_23350 PF00672 HAMP domain KM400_23350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_23350 PF00512 His Kinase A (phospho-acceptor) domain KM400_23350 PF13426 PAS domain KM400_23355 PF12796 Ankyrin repeats (3 copies) KM400_23360 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM400_23365 PF01741 Large-conductance mechanosensitive channel, MscL KM400_23390 PF00356 Bacterial regulatory proteins, lacI family KM400_23395 PF07537 CamS sex pheromone cAM373 precursor KM400_23400 PF11009 Protein of unknown function (DUF2847) KM400_23410 PF02073 Thermophilic metalloprotease (M29) KM400_23430 PF13302 Acetyltransferase (GNAT) domain KM400_23435 PF08245 Mur ligase middle domain KM400_23435 PF02875 Mur ligase family, glutamate ligase domain KM400_23435 PF01225 Mur ligase family, catalytic domain KM400_23445 PF01580 FtsK/SpoIIIE family KM400_23445 PF09397 Ftsk gamma domain KM400_23445 PF17854 FtsK alpha domain KM400_23455 PF01588 Putative tRNA binding domain KM400_23455 PF14794 Domain of unknown function (DUF4479) KM400_23460 PF07285 Protein of unknown function (DUF1444) KM400_23465 PF00085 Thioredoxin KM400_23470 PF01931 Protein of unknown function DUF84 KM400_23475 PF05343 M42 glutamyl aminopeptidase KM400_23485 PF00753 Metallo-beta-lactamase superfamily KM400_23490 PF02390 Putative methyltransferase KM400_23495 PF14165 YtzH-like protein KM400_23500 PF01636 Phosphotransferase enzyme family KM400_23505 PF17999 Pullulanase N1-terminal domain KM400_23505 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KM400_23505 PF00128 Alpha amylase, catalytic domain KM400_23510 PF02834 LigT like Phosphoesterase KM400_23515 PF01546 Peptidase family M20/M25/M40 KM400_23520 PF08220 DeoR-like helix-turn-helix domain KM400_23525 PF01479 S4 domain KM400_23525 PF00849 RNA pseudouridylate synthase KM400_23530 PF14667 Polysaccharide biosynthesis C-terminal domain KM400_23530 PF01943 Polysaccharide biosynthesis protein KM400_23540 PF07690 Major Facilitator Superfamily KM400_23545 PF01022 Bacterial regulatory protein, arsR family KM400_23550 PF08327 Activator of Hsp90 ATPase homolog 1-like protein KM400_23560 PF10957 Sporulation protein Cse60 KM400_23570 PF02559 CarD-like/TRCF domain KM400_23580 PF06800 Sugar transport protein KM400_23595 PF02391 MoaE protein KM400_23600 PF03205 Molybdopterin guanine dinucleotide synthesis protein B KM400_23605 PF00994 Probable molybdopterin binding domain KM400_23605 PF03454 MoeA C-terminal region (domain IV) KM400_23605 PF03453 MoeA N-terminal region (domain I and II) KM400_23610 PF01967 MoaC family KM400_23615 PF00899 ThiF family KM400_23620 PF06463 Molybdenum Cofactor Synthesis C KM400_23620 PF04055 Radical SAM superfamily KM400_23640 PF00581 Rhodanese-like domain KM400_23650 PF00561 alpha/beta hydrolase fold KM400_23655 PF03323 Bacillus/Clostridium GerA spore germination protein KM400_23660 PF03845 Spore germination protein KM400_23690 PF09334 tRNA synthetases class I (M) KM400_23690 PF13603 Leucyl-tRNA synthetase, Domain 2 KM400_23690 PF00133 tRNA synthetases class I (I, L, M and V) KM400_23690 PF08264 Anticodon-binding domain of tRNA KM400_23695 PF07690 Major Facilitator Superfamily KM400_23700 PF00999 Sodium/hydrogen exchanger family KM400_23705 PF02080 TrkA-C domain KM400_23710 PF00589 Phage integrase family KM400_23720 PF00005 ABC transporter KM400_23725 PF07786 Protein of unknown function (DUF1624) KM400_23725 PF04235 Protein of unknown function (DUF418) KM400_23735 PF10732 Protein of unknown function (DUF2524) KM400_23740 PF04055 Radical SAM superfamily KM400_23740 PF16199 Radical_SAM C-terminal domain KM400_23745 PF06962 Putative rRNA methylase KM400_23750 PF00005 ABC transporter KM400_23750 PF13732 Domain of unknown function (DUF4162) KM400_23760 PF01177 Asp/Glu/Hydantoin racemase KM400_23775 PF10776 Protein of unknown function (DUF2600) KM400_23780 PF12146 Serine aminopeptidase, S33 KM400_23785 PF00132 Bacterial transferase hexapeptide (six repeats) KM400_23790 PF01569 PAP2 superfamily KM400_23795 PF13439 Glycosyltransferase Family 4 KM400_23795 PF00534 Glycosyl transferases group 1 KM400_23800 PF12804 MobA-like NTP transferase domain KM400_23805 PF00994 Probable molybdopterin binding domain KM400_23820 PF02773 S-adenosylmethionine synthetase, C-terminal domain KM400_23820 PF02772 S-adenosylmethionine synthetase, central domain KM400_23820 PF00438 S-adenosylmethionine synthetase, N-terminal domain KM400_23825 PF01293 Phosphoenolpyruvate carboxykinase KM400_23860 PF01784 NIF3 (NGG1p interacting factor 3) KM400_23865 PF13426 PAS domain KM400_23865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_23865 PF13188 PAS domain KM400_23865 PF00989 PAS fold KM400_23865 PF00512 His Kinase A (phospho-acceptor) domain KM400_23870 PF00512 His Kinase A (phospho-acceptor) domain KM400_23870 PF08447 PAS fold KM400_23870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_23870 PF00989 PAS fold KM400_23875 PF08386 TAP-like protein KM400_23875 PF00561 alpha/beta hydrolase fold KM400_23900 PF00005 ABC transporter KM400_23905 PF00528 Binding-protein-dependent transport system inner membrane component KM400_23930 PF00293 NUDIX domain KM400_23950 PF02664 S-Ribosylhomocysteinase (LuxS) KM400_23955 PF01809 Putative membrane protein insertion efficiency factor KM400_23960 PF00484 Carbonic anhydrase KM400_23965 PF01654 Cytochrome bd terminal oxidase subunit I KM400_23970 PF02322 Cytochrome bd terminal oxidase subunit II KM400_23975 PF10676 Spore germination protein gerPA/gerPF KM400_23990 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM400_23990 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM400_24015 PF04012 PspA/IM30 family KM400_24030 PF07664 Ferrous iron transport protein B C terminus KM400_24030 PF02421 Ferrous iron transport protein B KM400_24030 PF17910 FeoB cytosolic helical domain KM400_24030 PF07670 Nucleoside recognition KM400_24040 PF09515 Thiamine transporter protein (Thia_YuaJ) KM400_24045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_24045 PF00672 HAMP domain KM400_24045 PF00512 His Kinase A (phospho-acceptor) domain KM400_24050 PF00072 Response regulator receiver domain KM400_24050 PF00486 Transcriptional regulatory protein, C terminal KM400_24075 PF00156 Phosphoribosyl transferase domain KM400_24080 PF00781 Diacylglycerol kinase catalytic domain KM400_24100 PF00248 Aldo/keto reductase family KM400_24115 PF09335 SNARE associated Golgi protein KM400_24120 PF00398 Ribosomal RNA adenine dimethylase KM400_24125 PF02687 FtsX-like permease family KM400_24130 PF00005 ABC transporter KM400_24135 PF12833 Helix-turn-helix domain KM400_24135 PF06445 GyrI-like small molecule binding domain KM400_24140 PF00072 Response regulator receiver domain KM400_24140 PF00486 Transcriptional regulatory protein, C terminal KM400_24145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_24150 PF02687 FtsX-like permease family KM400_24155 PF02687 FtsX-like permease family KM400_24160 PF00005 ABC transporter KM400_24175 PF02447 GntP family permease KM400_24180 PF00392 Bacterial regulatory proteins, gntR family KM400_24180 PF07702 UTRA domain KM400_24190 PF07071 KDGP aldolase KM400_24195 PF03841 L-seryl-tRNA selenium transferase KM400_24200 PF01979 Amidohydrolase family KM400_24215 PF02557 D-alanyl-D-alanine carboxypeptidase KM400_24220 PF00512 His Kinase A (phospho-acceptor) domain KM400_24220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_24225 PF00486 Transcriptional regulatory protein, C terminal KM400_24225 PF00072 Response regulator receiver domain KM400_24230 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KM400_24230 PF13378 Enolase C-terminal domain-like KM400_24235 PF00501 AMP-binding enzyme KM400_24235 PF13193 AMP-binding enzyme C-terminal domain KM400_24240 PF00378 Enoyl-CoA hydratase/isomerase KM400_24245 PF00561 alpha/beta hydrolase fold KM400_24250 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM400_24250 PF16582 Middle domain of thiamine pyrophosphate KM400_24250 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM400_24255 PF00425 chorismate binding enzyme KM400_24260 PF01040 UbiA prenyltransferase family KM400_24265 PF01258 Prokaryotic dksA/traR C4-type zinc finger KM400_24270 PF00313 'Cold-shock' DNA-binding domain KM400_24285 PF00343 Carbohydrate phosphorylase KM400_24290 PF00534 Glycosyl transferases group 1 KM400_24290 PF08323 Starch synthase catalytic domain KM400_24295 PF00483 Nucleotidyl transferase KM400_24300 PF00483 Nucleotidyl transferase KM400_24305 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KM400_24305 PF02806 Alpha amylase, C-terminal all-beta domain KM400_24305 PF00128 Alpha amylase, catalytic domain KM400_24320 PF00056 lactate/malate dehydrogenase, NAD binding domain KM400_24320 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KM400_24415 PF05697 Bacterial trigger factor protein (TF) KM400_24415 PF05698 Bacterial trigger factor protein (TF) C-terminus KM400_24450 PF02308 MgtC family KM400_24455 PF07885 Ion channel KM400_24455 PF02254 TrkA-N domain KM400_24460 PF08868 YugN-like family KM400_24465 PF00342 Phosphoglucose isomerase KM400_24470 PF04070 Domain of unknown function (DUF378) KM400_24475 PF00575 S1 RNA binding domain KM400_24480 PF00155 Aminotransferase class I and II KM400_24485 PF01037 Lrp/AsnC ligand binding domain KM400_24490 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KM400_24490 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KM400_24495 PF00561 alpha/beta hydrolase fold KM400_24495 PF08386 TAP-like protein KM400_24505 PF00155 Aminotransferase class I and II KM400_24520 PF08810 Kinase associated protein B KM400_24525 PF00929 Exonuclease KM400_24530 PF03600 Citrate transporter KM400_24545 PF03129 Anticodon binding domain KM400_24545 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM400_24550 PF03061 Thioesterase superfamily KM400_24560 PF02632 BioY family KM400_24570 PF00483 Nucleotidyl transferase KM400_24575 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KM400_24575 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KM400_24575 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KM400_24575 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KM400_24580 PF02457 DisA bacterial checkpoint controller nucleotide-binding KM400_24580 PF10372 Bacterial membrane-spanning protein N-terminus KM400_24585 PF00883 Cytosol aminopeptidase family, catalytic domain KM400_24585 PF02789 Cytosol aminopeptidase family, N-terminal domain KM400_24590 PF06725 3D domain KM400_24600 PF00293 NUDIX domain KM400_24600 PF13344 Haloacid dehalogenase-like hydrolase KM400_24605 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM400_24610 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM400_24620 PF06445 GyrI-like small molecule binding domain KM400_24635 PF04463 Protein of unknown function (DUF523) KM400_24655 PF01521 Iron-sulphur cluster biosynthesis KM400_24660 PF01678 Diaminopimelate epimerase KM400_24665 PF07293 Protein of unknown function (DUF1450) KM400_24670 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM400_24680 PF00664 ABC transporter transmembrane region KM400_24680 PF00005 ABC transporter KM400_24680 PF03412 Peptidase C39 family KM400_24685 PF03649 Uncharacterised protein family (UPF0014) KM400_24690 PF08274 PhnA Zinc-Ribbon KM400_24690 PF03831 PhnA domain KM400_24725 PF01909 Nucleotidyltransferase domain KM400_24725 PF13427 Domain of unknown function (DUF4111) KM400_24730 PF07315 Protein of unknown function (DUF1462) KM400_24735 PF01106 NifU-like domain KM400_24750 PF04608 Phosphatidylglycerophosphatase A KM400_24760 PF02525 Flavodoxin-like fold KM400_24765 PF13344 Haloacid dehalogenase-like hydrolase KM400_24775 PF01934 Protein of unknown function DUF86 KM400_24780 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded KM400_24795 PF06265 Protein of unknown function (DUF1027) KM400_24800 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) KM400_24805 PF13411 MerR HTH family regulatory protein KM400_24805 PF07739 TipAS antibiotic-recognition domain KM400_24810 PF10086 YhfC intramembrane metalloprotease KM400_24830 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family KM400_24830 PF04055 Radical SAM superfamily KM400_24835 PF01551 Peptidase family M23 KM400_24845 PF08827 Domain of unknown function (DUF1805) KM400_24850 PF02872 5'-nucleotidase, C-terminal domain KM400_24855 PF03551 Transcriptional regulator PadR-like family KM400_24860 PF04892 VanZ like family KM400_24865 PF01458 Uncharacterized protein family (UPF0051) KM400_24870 PF01592 NifU-like N terminal domain KM400_24875 PF00266 Aminotransferase class-V KM400_24880 PF01458 Uncharacterized protein family (UPF0051) KM400_24885 PF00005 ABC transporter KM400_24890 PF03180 NLPA lipoprotein KM400_24895 PF03180 NLPA lipoprotein KM400_24900 PF00528 Binding-protein-dependent transport system inner membrane component KM400_24905 PF09383 NIL domain KM400_24905 PF00005 ABC transporter KM400_24915 PF00085 Thioredoxin KM400_24920 PF01751 Toprim domain KM400_24925 PF01597 Glycine cleavage H-protein KM400_24930 PF03960 ArsC family KM400_24975 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KM400_24975 PF00056 lactate/malate dehydrogenase, NAD binding domain KM400_24995 PF13305 Tetracyclin repressor-like, C-terminal domain KM400_24995 PF00440 Bacterial regulatory proteins, tetR family KM400_25000 PF00753 Metallo-beta-lactamase superfamily KM400_25005 PF02770 Acyl-CoA dehydrogenase, middle domain KM400_25005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM400_25005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM400_25010 PF00108 Thiolase, N-terminal domain KM400_25010 PF02803 Thiolase, C-terminal domain KM400_25015 PF00378 Enoyl-CoA hydratase/isomerase KM400_25015 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KM400_25015 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KM400_25020 PF14115 YuzL-like protein KM400_25025 PF07943 Penicillin-binding protein 5, C-terminal domain KM400_25025 PF00768 D-alanyl-D-alanine carboxypeptidase KM400_25030 PF01619 Proline dehydrogenase KM400_25035 PF10835 Protein of unknown function (DUF2573) KM400_25040 PF01910 Thiamine-binding protein KM400_25045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM400_25045 PF00672 HAMP domain KM400_25045 PF02743 Cache domain KM400_25065 PF07690 Major Facilitator Superfamily KM400_25070 PF13520 Amino acid permease KM400_25080 PF02096 60Kd inner membrane protein KM400_25090 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM400_25090 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM400_25125 PF09335 SNARE associated Golgi protein KM400_25135 PF03734 L,D-transpeptidase catalytic domain KM400_25135 PF17969 L,D-transpeptidase C-terminal domain KM400_25140 PF00072 Response regulator receiver domain KM400_25140 PF00486 Transcriptional regulatory protein, C terminal KM400_25145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_25145 PF00512 His Kinase A (phospho-acceptor) domain KM400_25145 PF00989 PAS fold KM400_25145 PF16736 Single Cache-like KM400_25155 PF08264 Anticodon-binding domain of tRNA KM400_25155 PF09334 tRNA synthetases class I (M) KM400_25170 PF01883 Iron-sulfur cluster assembly protein KM400_25175 PF07504 Fungalysin/Thermolysin Propeptide Motif KM400_25175 PF03413 Peptidase propeptide and YPEB domain KM400_25175 PF01447 Thermolysin metallopeptidase, catalytic domain KM400_25175 PF02868 Thermolysin metallopeptidase, alpha-helical domain KM400_25180 PF17954 Quercetinase C-terminal cupin domain KM400_25180 PF02678 Pirin KM400_25185 PF01047 MarR family KM400_25195 PF00999 Sodium/hydrogen exchanger family KM400_25200 PF02080 TrkA-C domain KM400_25205 PF01235 Sodium:alanine symporter family KM400_25210 PF00210 Ferritin-like domain KM400_25225 PF03641 Possible lysine decarboxylase KM400_25235 PF00210 Ferritin-like domain KM400_25245 PF07662 Na+ dependent nucleoside transporter C-terminus KM400_25245 PF01773 Na+ dependent nucleoside transporter N-terminus KM400_25250 PF07662 Na+ dependent nucleoside transporter C-terminus KM400_25250 PF01773 Na+ dependent nucleoside transporter N-terminus KM400_25255 PF01235 Sodium:alanine symporter family KM400_25260 PF01235 Sodium:alanine symporter family KM400_25265 PF13460 NAD(P)H-binding KM400_25280 PF00248 Aldo/keto reductase family KM400_25285 PF07690 Major Facilitator Superfamily KM400_25290 PF01638 HxlR-like helix-turn-helix KM400_25295 PF07849 Protein of unknown function (DUF1641) KM400_25300 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM400_25305 PF00579 tRNA synthetases class I (W and Y) KM400_25305 PF01479 S4 domain KM400_25310 PF01565 FAD binding domain KM400_25310 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KM400_25320 PF17202 Single cache domain 3 KM400_25320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM400_25320 PF00672 HAMP domain KM400_25330 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KM400_25335 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KM400_25350 PF13302 Acetyltransferase (GNAT) domain KM400_25355 PF06146 Phosphate-starvation-inducible E KM400_25370 PF00005 ABC transporter KM400_25375 PF01032 FecCD transport family KM400_25380 PF01032 FecCD transport family KM400_25390 PF00486 Transcriptional regulatory protein, C terminal KM400_25390 PF00072 Response regulator receiver domain KM400_25400 PF01668 SmpB protein KM400_25405 PF17876 Cold shock domain KM400_25405 PF08206 Ribonuclease B OB domain KM400_25405 PF00773 RNB domain KM400_25405 PF00575 S1 RNA binding domain KM400_25410 PF12146 Serine aminopeptidase, S33 KM400_25415 PF03840 Preprotein translocase SecG subunit KM400_25420 PF04172 LrgB-like family KM400_25425 PF03788 LrgA family KM400_25430 PF01156 Inosine-uridine preferring nucleoside hydrolase KM400_25520 PF04860 Phage portal protein KM400_25540 PF02899 Phage integrase, N-terminal SAM-like domain KM400_25540 PF00589 Phage integrase family KM400_25545 PF00113 Enolase, C-terminal TIM barrel domain KM400_25545 PF03952 Enolase, N-terminal domain KM400_25550 PF06415 BPG-independent PGAM N-terminus (iPGM_N) KM400_25550 PF01676 Metalloenzyme superfamily KM400_25555 PF00121 Triosephosphate isomerase KM400_25560 PF00162 Phosphoglycerate kinase KM400_25565 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KM400_25565 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KM400_25570 PF04198 Putative sugar-binding domain KM400_25580 PF04963 Sigma-54 factor, core binding domain KM400_25580 PF04552 Sigma-54, DNA binding domain KM400_25580 PF00309 Sigma-54 factor, Activator interacting domain (AID) KM400_25600 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KM400_25605 PF07451 Stage V sporulation protein AD (SpoVAD) KM400_25610 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KM400_25620 PF04239 Protein of unknown function (DUF421) KM400_25625 PF00574 Clp protease KM400_25630 PF00381 PTS HPr component phosphorylation site KM400_25635 PF02650 WhiA C-terminal HTH domain KM400_25635 PF10298 WhiA N-terminal LAGLIDADG-like domain KM400_25635 PF14527 WhiA LAGLIDADG-like domain KM400_25640 PF01933 Uncharacterised protein family UPF0052 KM400_25645 PF03668 P-loop ATPase protein family KM400_25650 PF00293 NUDIX domain KM400_25660 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM400_25670 PF14602 Hexapeptide repeat of succinyl-transferase KM400_25675 PF13419 Haloacid dehalogenase-like hydrolase KM400_25680 PF01790 Prolipoprotein diacylglyceryl transferase KM400_25685 PF02603 HPr Serine kinase N terminus KM400_25685 PF07475 HPr Serine kinase C-terminal domain KM400_25690 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV KM400_25700 PF00005 ABC transporter KM400_25700 PF17755 UvrA DNA-binding domain KM400_25700 PF17760 UvrA interaction domain KM400_25705 PF17757 UvrB interaction domain KM400_25705 PF00271 Helicase conserved C-terminal domain KM400_25705 PF04851 Type III restriction enzyme, res subunit KM400_25705 PF02151 UvrB/uvrC motif KM400_25705 PF12344 Ultra-violet resistance protein B KM400_25710 PF01385 Probable transposase KM400_25710 PF07282 Putative transposase DNA-binding domain KM400_25710 PF12323 Helix-turn-helix domain KM400_25725 PF07739 TipAS antibiotic-recognition domain KM400_25725 PF13411 MerR HTH family regulatory protein KM400_25750 PF03601 Conserved hypothetical protein 698 KM400_25755 PF03466 LysR substrate binding domain KM400_25755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM400_25760 PF13411 MerR HTH family regulatory protein KM400_25765 PF03358 NADPH-dependent FMN reductase KM400_25770 PF12848 ABC transporter KM400_25770 PF00005 ABC transporter KM400_25775 PF01906 Putative heavy-metal-binding KM400_25780 PF00005 ABC transporter KM400_25780 PF00664 ABC transporter transmembrane region KM400_25785 PF17820 PDZ domain KM400_25790 PF17820 PDZ domain KM400_25790 PF03572 Peptidase family S41 KM400_25790 PF01471 Putative peptidoglycan binding domain KM400_25795 PF02687 FtsX-like permease family KM400_25795 PF18075 FtsX extracellular domain KM400_25800 PF00005 ABC transporter KM400_25805 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KM400_25815 PF01043 SecA preprotein cross-linking domain KM400_25815 PF07517 SecA DEAD-like domain KM400_25815 PF02810 SEC-C motif KM400_25815 PF07516 SecA Wing and Scaffold domain KM400_25820 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus KM400_25820 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KM400_25825 PF00313 'Cold-shock' DNA-binding domain KM400_25835 PF00271 Helicase conserved C-terminal domain KM400_25835 PF04851 Type III restriction enzyme, res subunit KM400_25840 PF00877 NlpC/P60 family KM400_25840 PF01476 LysM domain KM400_25845 PF01638 HxlR-like helix-turn-helix KM400_25850 PF02645 Uncharacterised protein, DegV family COG1307 KM400_25855 PF09186 Domain of unknown function (DUF1949) KM400_25855 PF01205 Uncharacterized protein family UPF0029 KM400_25860 PF03816 Cell envelope-related transcriptional attenuator domain KM400_25865 PF02350 UDP-N-acetylglucosamine 2-epimerase KM400_25870 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM400_25870 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM400_25870 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM400_25875 PF00953 Glycosyl transferase family 4 KM400_25880 PF01522 Polysaccharide deacetylase KM400_25885 PF03610 PTS system fructose IIA component KM400_25885 PF00874 PRD domain KM400_25885 PF00158 Sigma-54 interaction domain KM400_25895 PF02417 Chromate transporter KM400_25900 PF04794 YdjC-like protein KM400_25905 PF11975 Family 4 glycosyl hydrolase C-terminal domain KM400_25905 PF02056 Family 4 glycosyl hydrolase KM400_25910 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KM400_25915 PF02378 Phosphotransferase system, EIIC KM400_25920 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KM400_25930 PF02675 S-adenosylmethionine decarboxylase KM400_25935 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KM400_25940 PF02378 Phosphotransferase system, EIIC KM400_25945 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KM400_25950 PF00375 Sodium:dicarboxylate symporter family KM400_25960 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM400_25970 PF03466 LysR substrate binding domain KM400_25970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM400_25990 PF01654 Cytochrome bd terminal oxidase subunit I KM400_25995 PF02322 Cytochrome bd terminal oxidase subunit II KM400_26000 PF02040 Arsenical pump membrane protein KM400_26005 PF13667 ThiC-associated domain KM400_26005 PF01964 Radical SAM ThiC family KM400_26010 PF02652 L-lactate permease KM400_26020 PF09988 Uncharacterized metal-binding protein (DUF2227) KM400_26030 PF00884 Sulfatase KM400_26035 PF01063 Amino-transferase class IV KM400_26045 PF07662 Na+ dependent nucleoside transporter C-terminus KM400_26045 PF01773 Na+ dependent nucleoside transporter N-terminus KM400_26060 PF02028 BCCT, betaine/carnitine/choline family transporter KM400_26065 PF06725 3D domain KM400_26065 PF01476 LysM domain KM400_26090 PF04434 SWIM zinc finger KM400_26095 PF00271 Helicase conserved C-terminal domain KM400_26095 PF12419 SNF2 Helicase protein KM400_26095 PF00176 SNF2 family N-terminal domain KM400_26125 PF04542 Sigma-70 region 2 KM400_26125 PF04545 Sigma-70, region 4 KM400_26130 PF04893 Yip1 domain KM400_26135 PF12704 MacB-like periplasmic core domain KM400_26135 PF02687 FtsX-like permease family KM400_26140 PF00005 ABC transporter KM400_26160 PF07690 Major Facilitator Superfamily KM400_26175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_26175 PF00512 His Kinase A (phospho-acceptor) domain KM400_26175 PF00989 PAS fold KM400_26175 PF16736 Single Cache-like KM400_26180 PF00072 Response regulator receiver domain KM400_26180 PF00486 Transcriptional regulatory protein, C terminal KM400_26185 PF16363 GDP-mannose 4,6 dehydratase KM400_26190 PF03816 Cell envelope-related transcriptional attenuator domain KM400_26195 PF07977 FabA-like domain KM400_26200 PF02350 UDP-N-acetylglucosamine 2-epimerase KM400_26205 PF08239 Bacterial SH3 domain KM400_26205 PF00005 ABC transporter KM400_26210 PF01061 ABC-2 type transporter KM400_26215 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM400_26215 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM400_26215 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM400_26260 PF12116 Stage III sporulation protein D KM400_26275 PF01551 Peptidase family M23 KM400_26285 PF00005 ABC transporter KM400_26295 PF08486 Stage II sporulation protein KM400_26300 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KM400_26310 PF06612 Protein of unknown function (DUF1146) KM400_26315 PF00361 Proton-conducting membrane transporter KM400_26320 PF00361 Proton-conducting membrane transporter KM400_26325 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus KM400_26325 PF00361 Proton-conducting membrane transporter KM400_26325 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KM400_26330 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KM400_26335 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 KM400_26345 PF00146 NADH dehydrogenase KM400_26350 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit KM400_26355 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit KM400_26360 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit KM400_26365 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 KM400_26370 PF00563 EAL domain KM400_26370 PF00990 Diguanylate cyclase, GGDEF domain KM400_26370 PF03707 Bacterial signalling protein N terminal repeat KM400_26385 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain KM400_26385 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KM400_26390 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM400_26390 PF02874 ATP synthase alpha/beta family, beta-barrel domain KM400_26395 PF00231 ATP synthase KM400_26400 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM400_26400 PF00306 ATP synthase alpha/beta chain, C terminal domain KM400_26400 PF02874 ATP synthase alpha/beta family, beta-barrel domain KM400_26405 PF00213 ATP synthase delta (OSCP) subunit KM400_26410 PF00430 ATP synthase B/B' CF(0) KM400_26415 PF00137 ATP synthase subunit C KM400_26420 PF00119 ATP synthase A chain KM400_26425 PF03899 ATP synthase I chain KM400_26445 PF00464 Serine hydroxymethyltransferase KM400_26450 PF04260 Protein of unknown function (DUF436) KM400_26455 PF02502 Ribose/Galactose Isomerase KM400_26460 PF01451 Low molecular weight phosphotyrosine protein phosphatase KM400_26465 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KM400_26470 PF07681 DoxX KM400_26475 PF01613 Flavin reductase like domain KM400_26485 PF02659 Putative manganese efflux pump KM400_26490 PF03481 Putative GTP-binding controlling metal-binding KM400_26490 PF01300 Telomere recombination KM400_26500 PF09551 Stage II sporulation protein R (spore_II_R) KM400_26505 PF13847 Methyltransferase domain KM400_26505 PF17827 PrmC N-terminal domain KM400_26510 PF03462 PCRF domain KM400_26510 PF00472 RF-1 domain KM400_26515 PF00265 Thymidine kinase KM400_26520 PF01197 Ribosomal protein L31 KM400_26525 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM400_26525 PF07498 Rho termination factor, N-terminal domain KM400_26525 PF07497 Rho termination factor, RNA-binding domain KM400_26530 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded KM400_26535 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KM400_26540 PF01116 Fructose-bisphosphate aldolase class-II KM400_26545 PF00072 Response regulator receiver domain KM400_26550 PF10740 Domain of unknown function (DUF2529) KM400_26555 PF06418 CTP synthase N-terminus KM400_26555 PF00117 Glutamine amidotransferase class-I KM400_26560 PF05066 HB1, ASXL, restriction endonuclease HTH domain KM400_26570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM400_26570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM400_26570 PF02770 Acyl-CoA dehydrogenase, middle domain KM400_26575 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM400_26575 PF02770 Acyl-CoA dehydrogenase, middle domain KM400_26575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM400_26580 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KM400_26580 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KM400_26585 PF02803 Thiolase, C-terminal domain KM400_26585 PF00108 Thiolase, N-terminal domain KM400_26590 PF13183 4Fe-4S dicluster domain KM400_26590 PF02754 Cysteine-rich domain KM400_26595 PF13091 PLD-like domain KM400_26600 PF03851 UV-endonuclease UvdE KM400_26605 PF00563 EAL domain KM400_26605 PF00990 Diguanylate cyclase, GGDEF domain KM400_26605 PF03707 Bacterial signalling protein N terminal repeat KM400_26625 PF00196 Bacterial regulatory proteins, luxR family KM400_26625 PF00072 Response regulator receiver domain KM400_26630 PF07730 Histidine kinase KM400_26630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_26640 PF00005 ABC transporter KM400_26645 PF00557 Metallopeptidase family M24 KM400_26655 PF02225 PA domain KM400_26655 PF04389 Peptidase family M28 KM400_26675 PF08281 Sigma-70, region 4 KM400_26675 PF04542 Sigma-70 region 2 KM400_26680 PF03485 Arginyl tRNA synthetase N terminal domain KM400_26680 PF05746 DALR anticodon binding domain KM400_26680 PF00750 tRNA synthetases class I (R) KM400_26685 PF09148 Domain of unknown function (DUF1934) KM400_26690 PF02016 LD-carboxypeptidase N-terminal domain KM400_26690 PF17676 LD-carboxypeptidase C-terminal domain KM400_26705 PF00491 Arginase family KM400_26710 PF17284 Spermidine synthase tetramerisation domain KM400_26715 PF07690 Major Facilitator Superfamily KM400_26720 PF13411 MerR HTH family regulatory protein KM400_26725 PF03009 Glycerophosphoryl diester phosphodiesterase family KM400_26730 PF00912 Transglycosylase KM400_26730 PF00905 Penicillin binding protein transpeptidase domain KM400_26735 PF08741 YwhD family KM400_26740 PF02163 Peptidase family M50 KM400_26745 PF01361 Tautomerase enzyme KM400_26750 PF01966 HD domain KM400_26755 PF01497 Periplasmic binding protein KM400_26760 PF00005 ABC transporter KM400_26765 PF01032 FecCD transport family KM400_26770 PF01032 FecCD transport family KM400_26775 PF07293 Protein of unknown function (DUF1450) KM400_26790 PF03099 Biotin/lipoate A/B protein ligase family KM400_26795 PF01515 Phosphate acetyl/butaryl transferase KM400_26800 PF06778 Chlorite dismutase KM400_26805 PF07943 Penicillin-binding protein 5, C-terminal domain KM400_26805 PF00768 D-alanyl-D-alanine carboxypeptidase KM400_26810 PF07486 Cell Wall Hydrolase KM400_26815 PF09671 Spore coat protein (Spore_GerQ) KM400_26820 PF04241 Protein of unknown function (DUF423) KM400_26830 PF07885 Ion channel KM400_26830 PF02254 TrkA-N domain KM400_26835 PF00860 Permease family KM400_26845 PF12823 Domain of unknown function (DUF3817) KM400_26850 PF03167 Uracil DNA glycosylase superfamily KM400_26855 PF12679 ABC-2 family transporter protein KM400_26860 PF00005 ABC transporter KM400_26865 PF13472 GDSL-like Lipase/Acylhydrolase family KM400_26870 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KM400_26870 PF00356 Bacterial regulatory proteins, lacI family KM400_26880 PF03447 Homoserine dehydrogenase, NAD binding domain KM400_26880 PF00742 Homoserine dehydrogenase KM400_26880 PF01842 ACT domain KM400_26885 PF04204 Homoserine O-succinyltransferase KM400_26890 PF01053 Cys/Met metabolism PLP-dependent enzyme KM400_26900 PF13419 Haloacid dehalogenase-like hydrolase KM400_26905 PF00027 Cyclic nucleotide-binding domain KM400_26910 PF02525 Flavodoxin-like fold KM400_26915 PF00072 Response regulator receiver domain KM400_26915 PF00196 Bacterial regulatory proteins, luxR family KM400_26925 PF08543 Phosphomethylpyrimidine kinase KM400_26930 PF00990 Diguanylate cyclase, GGDEF domain KM400_26930 PF07694 5TMR of 5TMR-LYT KM400_26935 PF04328 Selenoprotein, putative KM400_26940 PF13722 5TM C-terminal transporter carbon starvation CstA KM400_26940 PF02554 Carbon starvation protein CstA KM400_26945 PF04397 LytTr DNA-binding domain KM400_26945 PF00072 Response regulator receiver domain KM400_26950 PF07690 Major Facilitator Superfamily KM400_26955 PF03808 Glycosyl transferase WecB/TagA/CpsF family KM400_26970 PF03458 UPF0126 domain KM400_26975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM400_26985 PF03061 Thioesterase superfamily KM400_26995 PF00535 Glycosyl transferase family 2 KM400_27000 PF00005 ABC transporter KM400_27000 PF12848 ABC transporter KM400_27020 PF00535 Glycosyl transferase family 2 KM400_27025 PF00440 Bacterial regulatory proteins, tetR family KM400_27030 PF00873 AcrB/AcrD/AcrF family KM400_27035 PF01641 SelR domain KM400_27035 PF01625 Peptide methionine sulfoxide reductase KM400_27040 PF01594 AI-2E family transporter KM400_27045 PF04172 LrgB-like family KM400_27050 PF03788 LrgA family KM400_27055 PF00072 Response regulator receiver domain KM400_27055 PF04397 LytTr DNA-binding domain KM400_27060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_27060 PF06580 Histidine kinase KM400_27060 PF13492 GAF domain KM400_27060 PF07694 5TMR of 5TMR-LYT KM400_27065 PF07690 Major Facilitator Superfamily KM400_27070 PF02028 BCCT, betaine/carnitine/choline family transporter KM400_27075 PF02898 Nitric oxide synthase, oxygenase domain KM400_27080 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KM400_27080 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KM400_27090 PF02293 AmiS/UreI family transporter KM400_27100 PF16363 GDP-mannose 4,6 dehydratase KM400_27105 PF03006 Haemolysin-III related KM400_27115 PF03880 DbpA RNA binding domain KM400_27115 PF00270 DEAD/DEAH box helicase KM400_27115 PF00271 Helicase conserved C-terminal domain KM400_27125 PF00478 IMP dehydrogenase / GMP reductase domain KM400_27130 PF01432 Peptidase family M3 KM400_27130 PF08439 Oligopeptidase F KM400_27140 PF02590 Predicted SPOUT methyltransferase KM400_27150 PF13180 PDZ domain KM400_27155 PF00753 Metallo-beta-lactamase superfamily KM400_27160 PF09648 YycH protein KM400_27165 PF07435 YycH protein KM400_27170 PF00672 HAMP domain KM400_27170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM400_27170 PF00512 His Kinase A (phospho-acceptor) domain KM400_27170 PF13426 PAS domain KM400_27175 PF00072 Response regulator receiver domain KM400_27175 PF00486 Transcriptional regulatory protein, C terminal KM400_27200 PF00709 Adenylosuccinate synthetase KM400_27205 PF03796 DnaB-like helicase C terminal domain KM400_27205 PF00772 DnaB-like helicase N terminal domain KM400_27210 PF03948 Ribosomal protein L9, C-terminal domain KM400_27210 PF01281 Ribosomal protein L9, N-terminal domain KM400_27215 PF01368 DHH family KM400_27215 PF02272 DHHA1 domain KM400_27220 PF09991 Predicted membrane protein (DUF2232) KM400_27225 PF01084 Ribosomal protein S18 KM400_27230 PF00436 Single-strand binding protein family KM400_27235 PF01250 Ribosomal protein S6 KM400_27240 PF06071 Protein of unknown function (DUF933) KM400_27240 PF01926 50S ribosome-binding GTPase KM400_27245 PF06107 Bacterial protein of unknown function (DUF951) KM400_27250 PF00924 Mechanosensitive ion channel KM400_27255 PF06866 Protein of unknown function (DUF1256) KM400_27260 PF17762 HTH domain found in ParB protein KM400_27260 PF02195 ParB-like nuclease domain KM400_27265 PF13614 AAA domain KM400_27270 PF17762 HTH domain found in ParB protein KM400_27270 PF02195 ParB-like nuclease domain KM400_27275 PF02527 rRNA small subunit methyltransferase G KM400_27280 PF13932 GidA associated domain KM400_27280 PF01134 Glucose inhibited division protein A KM400_27285 PF12631 MnmE helical domain KM400_27285 PF01926 50S ribosome-binding GTPase KM400_27285 PF10396 GTP-binding protein TrmE N-terminus KM400_27290 PF14804 Jag N-terminus KM400_27290 PF01424 R3H domain KM400_27295 PF02096 60Kd inner membrane protein KM400_27300 PF00825 Ribonuclease P KM400_27305 PF00468 Ribosomal protein L34 KM400_27320 PF08378 Nuclease-related domain KM400_27360 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) KM400_27440 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) KM400_27490 PF13427 Domain of unknown function (DUF4111) KM400_27490 PF18765 Polymerase beta, Nucleotidyltransferase KM400_27515 PF01609 Transposase DDE domain KM400_27520 PF01609 Transposase DDE domain KM400_27545 PF13491 4TM region of DNA translocase FtsK/SpoIIIE KM400_27545 PF17854 FtsK alpha domain KM400_27545 PF09397 Ftsk gamma domain KM400_27545 PF01580 FtsK/SpoIIIE family KM400_27560 PF00091 Tubulin/FtsZ family, GTPase domain KM400_27635 PF00437 Type II/IV secretion system protein KM400_27760 PF10087 Uncharacterized protein conserved in bacteria (DUF2325) KM400_27775 PF04235 Protein of unknown function (DUF418) KM400_27795 PF00395 S-layer homology domain KM400_27800 PF01569 PAP2 superfamily KM400_27815 PF00535 Glycosyl transferase family 2 KM400_27820 PF00483 Nucleotidyl transferase KM400_27825 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM400_27825 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM400_27825 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM400_27865 PF03497 Anthrax toxin LF subunit KM400_27865 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain KM400_27885 PF08279 HTH domain KM400_27885 PF05043 Mga helix-turn-helix domain KM400_27885 PF00874 PRD domain KM400_27910 PF02796 Helix-turn-helix domain of resolvase KM400_27910 PF00239 Resolvase, N terminal domain KM400_27915 PF03845 Spore germination protein KM400_27920 PF03323 Bacillus/Clostridium GerA spore germination protein KM400_27925 PF05504 Spore germination B3/ GerAC like, C-terminal KM400_27940 PF03495 Clostridial binary toxin B/anthrax toxin PA Ca-binding domain KM400_27940 PF17475 Clostridial binary toxin B/anthrax toxin PA domain 2 KM400_27940 PF07691 PA14 domain KM400_27940 PF17476 Clostridial binary toxin B/anthrax toxin PA domain 3 KM400_27945 PF01022 Bacterial regulatory protein, arsR family KM400_27970 PF09156 Anthrax toxin lethal factor, middle domain KM400_27970 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain KM400_27990 PF18277 AbrB C-terminal domain KM400_27990 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KM400_28000 PF00589 Phage integrase family KM400_28000 PF02899 Phage integrase, N-terminal SAM-like domain KM400_28030 PF14436 Bacterial EndoU nuclease KM400_28030 PF04740 LXG domain of WXG superfamily KM400_28055 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment KM400_28065 PF00589 Phage integrase family KM400_28090 PF18801 response regulator aspartate phosphatase H, N terminal KM400_28100 PF17209 Hfq protein KM400_28105 PF01022 Bacterial regulatory protein, arsR family KM400_28110 PF02600 Disulfide bond formation protein DsbB KM400_28125 PF00565 Staphylococcal nuclease homologue KM400_28130 PF13342 C-terminal repeat of topoisomerase KM400_28130 PF01751 Toprim domain KM400_28130 PF01131 DNA topoisomerase KM400_28140 PF08708 Primase C terminal 1 (PriCT-1) KM400_28160 PF17362 Family of unknown function KM400_28175 PF17631 Family of unknown function (DUF5512) KM400_28215 PF00437 Type II/IV secretion system protein KM400_28245 PF04956 TrbC/VIRB2 family KM400_28260 PF12696 TraM recognition site of TraD and TraG KM400_28305 PF17632 Family of unknown function (DUF5513) KM400_28330 PF17633 Family of unknown function (DUF5514) KM400_28335 PF17630 Family of unknown function (DUF5511) KM400_28340 PF18840 Large polyvalent protein associated domain 25 KM400_28355 PF13154 Protein of unknown function (DUF3991) KM400_28360 PF01751 Toprim domain KM400_28360 PF01131 DNA topoisomerase KM400_28365 PF01751 Toprim domain KM400_28365 PF01131 DNA topoisomerase KM400_28400 PF17443 Uncharacterized protein pXO2-72 KM400_28420 PF11798 IMS family HHH motif KM400_28420 PF11799 impB/mucB/samB family C-terminal domain KM400_28420 PF00817 impB/mucB/samB family KM400_28425 PF13411 MerR HTH family regulatory protein KM400_28425 PF13152 Protein of unknown function (DUF3967) KM400_28430 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM400_28460 PF08280 M protein trans-acting positive regulator (MGA) HTH domain KM400_28460 PF05043 Mga helix-turn-helix domain KM400_28460 PF00874 PRD domain KM400_28465 PF01810 LysE type translocator KM400_28475 PF08279 HTH domain KM400_28475 PF05043 Mga helix-turn-helix domain KM400_28475 PF00874 PRD domain KM400_28480 PF09385 Histidine kinase N terminal KM400_28490 PF10502 Signal peptidase, peptidase S26 KM400_28505 PF01022 Bacterial regulatory protein, arsR family KM400_28515 PF08245 Mur ligase middle domain KM400_28520 PF14102 Capsule biosynthesis CapC KM400_28525 PF09587 Bacterial capsule synthesis protein PGA_cap KM400_28545 PF08280 M protein trans-acting positive regulator (MGA) HTH domain KM400_28545 PF05043 Mga helix-turn-helix domain KM400_28555 PF01569 PAP2 superfamily KM400_28565 PF00440 Bacterial regulatory proteins, tetR family KM400_28570 PF04463 Protein of unknown function (DUF523) KM400_28575 PF02517 CPBP intramembrane metalloprotease KM400_28580 PF01906 Putative heavy-metal-binding KM400_28600 PF00395 S-layer homology domain KM400_28600 PF01520 N-acetylmuramoyl-L-alanine amidase KM400_28615 PF13614 AAA domain