locus-tag	class	description
BAMEG_0002	COG0592	DNA-directed DNA polymerase activity
BAMEG_0003	COG2501	S4 domain
BAMEG_0005	COG0187	DNA topoisomerase II activity
BAMEG_0006	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BAMEG_0014	COG0516	GMP reductase activity
BAMEG_0014	COG0517	IMP dehydrogenase activity
BAMEG_0015	COG1686	Belongs to the peptidase S11 family
BAMEG_0021	COG1428	Deoxynucleoside kinase
BAMEG_0022	COG1428	Deoxynucleoside kinase
BAMEG_0023	COG1335	isochorismatase
BAMEG_0024	COG0590	tRNA wobble adenosine to inosine editing
BAMEG_0026	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
BAMEG_0038	COG1982	Orn Lys Arg decarboxylase major
BAMEG_0040	COG0470	DNA polymerase III
BAMEG_0041	COG1774	PSP1 C-terminal conserved region
BAMEG_0043	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
BAMEG_0045	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
BAMEG_0046	COG2002	toxin-antitoxin pair type II binding
BAMEG_0047	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BAMEG_0047	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BAMEG_0048	COG0084	hydrolase, TatD family'
BAMEG_0049	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
BAMEG_0052	COG4466	Protein conserved in bacteria
BAMEG_0055	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
BAMEG_0057	COG0251	oxidation-reduction process
BAMEG_0060	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BAMEG_0061	COG0193	aminoacyl-tRNA hydrolase activity
BAMEG_0063	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
BAMEG_0064	COG2002	toxin-antitoxin pair type II binding
BAMEG_0065	COG2244	polysaccharide biosynthetic process
BAMEG_0066	COG3956	TIGRFAM MazG family protein
BAMEG_0067	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
BAMEG_0071	COG1098	S1 RNA binding domain
BAMEG_0074	COG2208	phosphoserine phosphatase activity
BAMEG_0075	COG0037	tRNA processing
BAMEG_0077	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BAMEG_0080	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
BAMEG_0081	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
BAMEG_0082	COG0512	Glutamine amidotransferase of anthranilate synthase
BAMEG_0083	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BAMEG_0084	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
BAMEG_0085	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
BAMEG_0086	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
BAMEG_0087	COG1396	sequence-specific DNA binding
BAMEG_0088	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BAMEG_0095	COG3880	PFAM UvrB UvrC protein
BAMEG_0097	COG0542	response to heat
BAMEG_0098	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
BAMEG_0100	COG4956	integral membrane protein (PIN domain superfamily)
BAMEG_0104	COG1045	serine acetyltransferase
BAMEG_0107	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BAMEG_0108	COG3688	RNA-binding protein containing a PIN domain
BAMEG_0110	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BAMEG_0111	COG0250	Participates in transcription elongation, termination and antitermination
BAMEG_0117	COG2813	Specifically methylates the guanine in position
BAMEG_0119	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BAMEG_0120	COG1358	cellular component organization or biogenesis
BAMEG_0141	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
BAMEG_0146	COG0201	protein transport
BAMEG_0148	COG0024	Methionine aminopeptidase
BAMEG_0150	COG0257	Belongs to the bacterial ribosomal protein bL36 family
BAMEG_0156	COG1122	ATPase activity
BAMEG_0157	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BAMEG_0158	COG0101	tRNA pseudouridine synthase activity
BAMEG_0163	COG0860	N-Acetylmuramoyl-L-alanine amidase
BAMEG_0164	COG0489	protein tyrosine kinase activity
BAMEG_0166	COG2194	sulfuric ester hydrolase activity
BAMEG_0167	COG0726	polysaccharide deacetylase
BAMEG_0185	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
BAMEG_0186	COG4856	YbbR-like protein
BAMEG_0189	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
BAMEG_0190	COG0596	Alpha beta hydrolase
BAMEG_0195	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
BAMEG_0196	COG1506	peptidase
BAMEG_0196	COG0823	Involved in the tonB-independent uptake of proteins
BAMEG_0196	COG4946	Tricorn protease homolog
BAMEG_0204	COG1028	Short-chain dehydrogenase reductase Sdr
BAMEG_0205	COG2011	ABC-type metal ion transport system permease component
BAMEG_0206	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BAMEG_0207	COG1464	Belongs to the NlpA lipoprotein family
BAMEG_0211	COG0277	FAD linked oxidase domain protein
BAMEG_0212	COG2271	Major facilitator Superfamily
BAMEG_0214	COG2814	Major facilitator Superfamily
BAMEG_0218	COG0601	transmembrane transport
BAMEG_0219	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BAMEG_0220	COG0444	Belongs to the ABC transporter superfamily
BAMEG_0221	COG4608	Belongs to the ABC transporter superfamily
BAMEG_0222	COG4166	transmembrane transport
BAMEG_0224	COG2207	Transcriptional regulator
BAMEG_0227	COG4166	transmembrane transport
BAMEG_0228	COG4166	transmembrane transport
BAMEG_0230	COG0656	L-ascorbic acid biosynthetic process
BAMEG_0231	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BAMEG_0234	COG4149	molybdate abc transporter
BAMEG_0235	COG0725	ABC transporter, periplasmic molybdate-binding protein
BAMEG_0236	COG0725	ABC transporter, periplasmic molybdate-binding protein
BAMEG_0237	COG1910	domain protein
BAMEG_0238	COG0583	DNA-binding transcription factor activity
BAMEG_0239	COG0697	spore germination
BAMEG_0241	COG0204	Acyl-transferase
BAMEG_0243	COG1609	Transcriptional regulator
BAMEG_0244	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BAMEG_0247	COG0084	hydrolase, TatD family'
BAMEG_0248	COG5298	Protein conserved in bacteria
BAMEG_0254	COG0488	(ABC) transporter
BAMEG_0257	COG0747	negative chemotaxis
BAMEG_0258	COG0601	transmembrane transport
BAMEG_0260	COG0444	Belongs to the ABC transporter superfamily
BAMEG_0261	COG4608	Belongs to the ABC transporter superfamily
BAMEG_0262	COG0561	phosphatase activity
BAMEG_0263	COG0561	phosphatase activity
BAMEG_0269	COG3185	4-Hydroxyphenylpyruvate dioxygenase
BAMEG_0270	COG0179	Fumarylacetoacetate (FAA) hydrolase
BAMEG_0272	COG2814	Major facilitator Superfamily
BAMEG_0275	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
BAMEG_0277	COG0705	Rhomboid family
BAMEG_0277	COG0457	Tetratricopeptide repeat
BAMEG_0278	COG4294	response to UV
BAMEG_0280	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
BAMEG_0281	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BAMEG_0282	COG0864	Transcriptional regulator
BAMEG_0283	COG2337	Toxic component of a toxin-antitoxin (TA) module
BAMEG_0284	COG2183	response to ionizing radiation
BAMEG_0303	COG0802	atpase or kinase
BAMEG_0304	COG1214	PFAM Peptidase M22, glycoprotease
BAMEG_0305	COG0456	acetyltransferase
BAMEG_0306	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
BAMEG_0307	COG0488	(ABC) transporter
BAMEG_0310	COG1266	CAAX protease self-immunity
BAMEG_0316	COG2252	PERMEase
BAMEG_0318	COG5002	protein histidine kinase activity
BAMEG_0325	COG2226	methyltransferase
BAMEG_0330	COG1215	transferase activity, transferring glycosyl groups
BAMEG_0336	COG1968	undecaprenyl-diphosphatase activity
BAMEG_0339	COG2205	protein histidine kinase activity
BAMEG_0340	COG0745	RESPONSE REGULATOR receiver
BAMEG_0346	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
BAMEG_0347	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
BAMEG_0348	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
BAMEG_0350	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BAMEG_0353	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
BAMEG_0355	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
BAMEG_0357	COG0151	Belongs to the GarS family
BAMEG_0362	COG0210	DNA helicase
BAMEG_0364	COG4851	CamS sex pheromone cAM373 precursor
BAMEG_0368	COG1335	isochorismatase
BAMEG_0370	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BAMEG_0371	COG2011	ABC-type metal ion transport system permease component
BAMEG_0372	COG1464	Belongs to the NlpA lipoprotein family
BAMEG_0375	COG0003	Pfam Anion-transporting ATPase
BAMEG_0376	COG0003	Pfam Anion-transporting ATPase
BAMEG_0377	COG1846	Transcriptional regulator
BAMEG_0378	COG4682	membrane
BAMEG_0382	COG1597	lipid kinase activity
BAMEG_0383	COG0546	phosphoglycolate phosphatase activity
BAMEG_0384	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BAMEG_0386	COG1012	belongs to the aldehyde dehydrogenase family
BAMEG_0387	COG2076	Multidrug Resistance protein
BAMEG_0388	COG2309	aminopeptidase activity
BAMEG_0391	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BAMEG_0393	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BAMEG_0394	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BAMEG_0396	COG4807	Protein conserved in bacteria
BAMEG_0402	COG1473	amidohydrolase
BAMEG_0405	COG0450	alkyl hydroperoxide reductase
BAMEG_0406	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
BAMEG_0408	COG0235	Class ii aldolase
BAMEG_0409	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAMEG_0410	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAMEG_0411	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BAMEG_0414	COG0166	Belongs to the GPI family
BAMEG_0421	COG5002	protein histidine kinase activity
BAMEG_0426	COG3541	Predicted nucleotidyltransferase
BAMEG_0427	COG2814	Major facilitator Superfamily
BAMEG_0428	COG0723	plastoquinol--plastocyanin reductase activity
BAMEG_0428	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BAMEG_0430	COG0765	amino acid transport
BAMEG_0431	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BAMEG_0433	COG0840	transmembrane signaling receptor activity
BAMEG_0434	COG0840	transmembrane signaling receptor activity
BAMEG_0435	COG0366	Alpha amylase catalytic
BAMEG_0436	COG1263	PTS System
BAMEG_0436	COG2190	(PTS) system
BAMEG_0436	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BAMEG_0444	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
BAMEG_0448	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BAMEG_0451	COG1116	anion transmembrane transporter activity
BAMEG_0452	COG0488	(ABC) transporter
BAMEG_0461	COG2270	Major facilitator Superfamily
BAMEG_0464	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
BAMEG_0467	COG2310	stress, protein
BAMEG_0468	COG2310	stress, protein
BAMEG_0469	COG2310	stress, protein
BAMEG_0470	COG0861	Integral membrane protein TerC family
BAMEG_0473	COG3853	Toxic anion resistance protein (TelA)
BAMEG_0476	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BAMEG_0478	COG1295	ribonuclease BN
BAMEG_0479	COG2217	Heavy metal translocating P-type atpase
BAMEG_0480	COG0697	spore germination
BAMEG_0482	COG0681	Belongs to the peptidase S26 family
BAMEG_0485	COG0586	Pfam SNARE associated Golgi protein
BAMEG_0489	COG3871	stress protein (general stress protein 26)
BAMEG_0490	COG0387	Pfam Sodium calcium exchanger
BAMEG_0492	COG0535	radical SAM domain protein
BAMEG_0497	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
BAMEG_0498	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BAMEG_0499	COG0582	viral genome integration into host DNA
BAMEG_0504	COG1396	sequence-specific DNA binding
BAMEG_0511	COG1484	DNA-dependent DNA replication
BAMEG_0515	COG1191	sigma factor activity
BAMEG_0530	COG0582	viral genome integration into host DNA
BAMEG_0535	COG4626	Terminase
BAMEG_0535	COG1802	Transcriptional regulator
BAMEG_0554	COG4824	toxin secretion phage lysis holin
BAMEG_0564	COG1399	metal-binding, possibly nucleic acid-binding protein
BAMEG_0568	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BAMEG_0571	COG4839	cell division protein FtsL
BAMEG_0573	COG0768	penicillin binding
BAMEG_0574	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BAMEG_0577	COG0772	Belongs to the SEDS family
BAMEG_0578	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
BAMEG_0579	COG0812	UDP-N-acetylmuramate dehydrogenase activity
BAMEG_0580	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
BAMEG_0581	COG0849	cell division
BAMEG_0582	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
BAMEG_0584	COG1191	sigma factor activity
BAMEG_0585	COG1191	sigma factor activity
BAMEG_0586	COG1873	PFAM PRC-barrel domain
BAMEG_0588	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
BAMEG_0590	COG0762	integral membrane protein
BAMEG_0591	COG2302	S4 RNA-binding domain
BAMEG_0592	COG3599	regulation of cell shape
BAMEG_0593	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
BAMEG_0596	COG0564	pseudouridine synthase activity
BAMEG_0597	COG0564	pseudouridine synthase activity
BAMEG_0605	COG0505	Belongs to the CarA family
BAMEG_0613	COG3069	C4-dicarboxylate transmembrane transporter activity
BAMEG_0616	COG0006	proline dipeptidase activity
BAMEG_0619	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
BAMEG_0620	COG1561	YicC-like family, N-terminal region
BAMEG_0622	COG0194	GDP metabolic process
BAMEG_0624	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BAMEG_0625	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
BAMEG_0626	COG0242	peptide deformylase activity
BAMEG_0628	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
BAMEG_0628	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
BAMEG_0630	COG0631	protein serine/threonine phosphatase activity
BAMEG_0631	COG2815	serine threonine protein kinase
BAMEG_0631	COG0515	serine threonine protein kinase
BAMEG_0632	COG1162	GTPase activity
BAMEG_0633	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
BAMEG_0634	COG1564	THIamine pyrophosphokinase
BAMEG_0636	COG1302	Protein conserved in bacteria
BAMEG_0637	COG1461	Dihydroxyacetone kinase
BAMEG_0638	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
BAMEG_0641	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
BAMEG_0642	COG1028	Short-chain dehydrogenase reductase Sdr
BAMEG_0645	COG1196	nuclear chromosome segregation
BAMEG_0646	COG0552	protein localization to endoplasmic reticulum
BAMEG_0648	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
BAMEG_0650	COG1837	Belongs to the UPF0109 family
BAMEG_0659	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
BAMEG_0661	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BAMEG_0663	COG4974	Belongs to the 'phage' integrase family
BAMEG_0669	COG0528	UMP kinase activity
BAMEG_0671	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
BAMEG_0672	COG4589	Belongs to the CDS family
BAMEG_0673	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
BAMEG_0674	COG0750	zinc metalloprotease
BAMEG_0678	COG0195	Participates in both transcription termination and antitermination
BAMEG_0679	COG2740	Nucleic-acid-binding protein implicated in transcription termination
BAMEG_0680	COG1358	cellular component organization or biogenesis
BAMEG_0682	COG1550	Protein conserved in bacteria
BAMEG_0684	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
BAMEG_0685	COG0196	riboflavin kinase activity
BAMEG_0688	COG0726	polysaccharide deacetylase
BAMEG_0689	COG0612	Peptidase, M16
BAMEG_0690	COG1873	PFAM PRC-barrel domain
BAMEG_0691	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BAMEG_0692	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BAMEG_0693	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BAMEG_0694	COG0527	aspartate kinase activity
BAMEG_0696	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BAMEG_0697	COG0740	serine-type endopeptidase activity
BAMEG_0699	COG1674	ftsk spoiiie
BAMEG_0701	COG2188	Transcriptional regulator
BAMEG_0707	COG0612	Peptidase, M16
BAMEG_0708	COG0612	Peptidase, M16
BAMEG_0709	COG0300	oxidoreductase activity
BAMEG_0712	COG1426	Protein conserved in bacteria
BAMEG_0713	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BAMEG_0718	COG1692	metallophosphoesterase
BAMEG_0719	COG2359	stage V sporulation protein S
BAMEG_0721	COG0674	pyruvate-flavodoxin oxidoreductase activity
BAMEG_0721	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
BAMEG_0722	COG1013	pyruvate-flavodoxin oxidoreductase activity
BAMEG_0723	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
BAMEG_0724	COG4550	Control of competence regulator ComK, YlbF/YmcA
BAMEG_0733	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
BAMEG_0735	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
BAMEG_0736	COG1368	sulfuric ester hydrolase activity
BAMEG_0737	COG0562	UDP-galactopyranose mutase
BAMEG_0738	COG3773	Cell wall hydrolase
BAMEG_0740	COG1404	Belongs to the peptidase S8 family
BAMEG_0743	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
BAMEG_0744	COG0596	Alpha beta hydrolase
BAMEG_0744	COG0508	dehydrogenase complex catalyzes the overall conversion of
BAMEG_0745	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BAMEG_0746	COG1380	Effector of murein hydrolase LrgA
BAMEG_0747	COG1346	cytolysis
BAMEG_0751	COG3300	MHYT domain
BAMEG_0751	COG5001	Diguanylate cyclase
BAMEG_0753	COG0346	lactoylglutathione lyase activity
BAMEG_0754	COG2267	carboxylic ester hydrolase activity
BAMEG_0758	COG2364	Membrane
BAMEG_0760	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
BAMEG_0761	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BAMEG_0762	COG2169	Transcriptional regulator
BAMEG_0763	COG0708	Exodeoxyribonuclease III
BAMEG_0765	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BAMEG_0766	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAMEG_0767	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAMEG_0768	COG1120	ATPase activity
BAMEG_0769	COG2819	hydrolase of the alpha beta superfamily
BAMEG_0771	COG1937	Protein conserved in bacteria
BAMEG_0772	COG2608	mercury ion transmembrane transporter activity
BAMEG_0773	COG2217	Heavy metal translocating P-type atpase
BAMEG_0775	COG2116	formate transmembrane transporter activity
BAMEG_0776	COG1408	metallophosphoesterase
BAMEG_0779	COG1113	amino acid transport
BAMEG_0782	COG2322	membrane
BAMEG_0783	COG1979	alcohol dehydrogenase
BAMEG_0784	COG1979	alcohol dehydrogenase
BAMEG_0785	COG1349	DNA-binding transcription factor activity
BAMEG_0786	COG1105	Belongs to the carbohydrate kinase PfkB family
BAMEG_0787	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BAMEG_0787	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BAMEG_0787	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BAMEG_0788	COG1388	LysM domain
BAMEG_0788	COG3584	3D domain protein
BAMEG_0794	COG0464	growth
BAMEG_0795	COG2860	membrane
BAMEG_0796	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BAMEG_0797	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BAMEG_0798	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
BAMEG_0799	COG0789	Transcriptional regulator
BAMEG_0800	COG0174	glutamine synthetase
BAMEG_0822	COG1351	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NAD(P)H and FADH(2) as the reductant
BAMEG_0833	COG1595	DNA-templated transcription, initiation
BAMEG_0867	COG4824	toxin secretion phage lysis holin
BAMEG_0868	COG1388	LysM domain
BAMEG_0868	COG3409	Peptidoglycan-binding domain 1 protein
BAMEG_0868	COG5632	N-Acetylmuramoyl-L-alanine amidase
BAMEG_0878	COG1695	Transcriptional regulator
BAMEG_0882	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
BAMEG_0884	COG0737	Belongs to the 5'-nucleotidase family
BAMEG_0887	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
BAMEG_0888	COG3639	organic phosphonate transmembrane transporter activity
BAMEG_0894	COG1132	(ABC) transporter
BAMEG_0895	COG1132	(ABC) transporter
BAMEG_0898	COG3409	Peptidoglycan-binding domain 1 protein
BAMEG_0898	COG5632	N-Acetylmuramoyl-L-alanine amidase
BAMEG_0900	COG0730	response to heat
BAMEG_0901	COG0730	response to heat
BAMEG_0904	COG1346	cytolysis
BAMEG_0905	COG1380	Effector of murein hydrolase LrgA
BAMEG_0906	COG0583	DNA-binding transcription factor activity
BAMEG_0908	COG0785	Cytochrome C biogenesis protein
BAMEG_0909	COG4846	Membrane protein involved in cytochrome C biogenesis
BAMEG_0920	COG2226	methyltransferase
BAMEG_0925	COG0010	Belongs to the arginase family
BAMEG_0926	COG1329	Transcriptional regulator
BAMEG_0927	COG1902	pentaerythritol trinitrate reductase activity
BAMEG_0928	COG0069	glutamate synthase activity
BAMEG_0929	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BAMEG_0930	COG0346	lactoylglutathione lyase activity
BAMEG_0931	COG0400	carboxylic ester hydrolase activity
BAMEG_0932	COG5002	protein histidine kinase activity
BAMEG_0934	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BAMEG_0943	COG0318	PFAM AMP-dependent synthetase and ligase
BAMEG_0944	COG1268	BioY protein
BAMEG_0945	COG0318	PFAM AMP-dependent synthetase and ligase
BAMEG_0946	COG0183	Belongs to the thiolase family
BAMEG_0949	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
BAMEG_0951	COG2211	Major facilitator Superfamily
BAMEG_0955	COG0726	polysaccharide deacetylase
BAMEG_0957	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
BAMEG_0958	COG2274	protein secretion by the type I secretion system
BAMEG_0961	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BAMEG_0967	COG0824	Thioesterase
BAMEG_0968	COG4841	protein insertion into membrane
BAMEG_0969	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
BAMEG_0972	COG0745	RESPONSE REGULATOR receiver
BAMEG_0973	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BAMEG_0974	COG1832	CoA-binding protein
BAMEG_0975	COG0187	DNA topoisomerase II activity
BAMEG_0976	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BAMEG_0977	COG0673	inositol 2-dehydrogenase activity
BAMEG_0979	COG1131	(ABC) transporter
BAMEG_0984	COG1595	DNA-templated transcription, initiation
BAMEG_0986	COG1316	TRANSCRIPTIONal
BAMEG_0987	COG1301	dicarboxylic acid transport
BAMEG_0988	COG4166	transmembrane transport
BAMEG_0990	COG4166	transmembrane transport
BAMEG_0991	COG4166	transmembrane transport
BAMEG_0992	COG2226	methyltransferase
BAMEG_1001	COG0697	spore germination
BAMEG_1002	COG3383	formate dehydrogenase (NAD+) activity
BAMEG_1003	COG2427	Protein of unknown function (DUF1641)
BAMEG_1004	COG5609	conserved protein (DUF2294)
BAMEG_1005	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
BAMEG_1007	COG2116	formate transmembrane transporter activity
BAMEG_1008	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BAMEG_1009	COG0303	'Molybdopterin
BAMEG_1010	COG0314	molybdopterin synthase activity
BAMEG_1012	COG0489	protein tyrosine kinase activity
BAMEG_1015	COG3326	Membrane
BAMEG_1016	COG2962	Rard protein
BAMEG_1017	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
BAMEG_1018	COG1657	PFAM Prenyltransferase squalene oxidase
BAMEG_1020	COG1028	Short-chain dehydrogenase reductase Sdr
BAMEG_1021	COG1012	belongs to the aldehyde dehydrogenase family
BAMEG_1023	COG4145	pantothenate transmembrane transporter activity
BAMEG_1028	COG0165	Argininosuccinate lyase
BAMEG_1030	COG1028	Short-chain dehydrogenase reductase Sdr
BAMEG_1036	COG0716	FMN binding
BAMEG_1038	COG1278	Cold shock
BAMEG_1044	COG2720	vancomycin resistance protein
BAMEG_1045	COG2514	catechol 2,3-dioxygenase activity
BAMEG_1048	COG1285	pathogenesis
BAMEG_1050	COG1024	Enoyl-CoA hydratase
BAMEG_1051	COG1216	Glycosyl transferase, family 2
BAMEG_1057	COG0277	FAD linked oxidase domain protein
BAMEG_1058	COG0385	Bile acid
BAMEG_1060	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
BAMEG_1061	COG2808	Putative FMN-binding domain
BAMEG_1064	COG0457	Tetratricopeptide repeat
BAMEG_1066	COG0604	alcohol dehydrogenase
BAMEG_1067	COG0640	Transcriptional regulator
BAMEG_1071	COG0584	glycerophosphoryl diester phosphodiesterase
BAMEG_1077	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BAMEG_1078	COG1164	Oligoendopeptidase f
BAMEG_1079	COG2162	N-hydroxyarylamine O-acetyltransferase activity
BAMEG_1083	COG1193	negative regulation of DNA recombination
BAMEG_1087	COG0583	DNA-binding transcription factor activity
BAMEG_1093	COG0384	phenazine biosynthesis protein PhzF
BAMEG_1094	COG3739	integral membrane protein
BAMEG_1095	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAMEG_1096	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAMEG_1098	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BAMEG_1103	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
BAMEG_1104	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
BAMEG_1111	COG2814	Major facilitator Superfamily
BAMEG_1112	COG1113	amino acid transport
BAMEG_1113	COG0604	alcohol dehydrogenase
BAMEG_1120	COG2072	flavoprotein involved in K transport
BAMEG_1127	COG3409	Peptidoglycan-binding domain 1 protein
BAMEG_1127	COG3757	hydrolase, family 25
BAMEG_1128	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BAMEG_1130	COG1151	hydroxylamine reductase activity
BAMEG_1139	COG1309	transcriptional regulator
BAMEG_1143	COG1191	sigma factor activity
BAMEG_1146	COG0726	polysaccharide deacetylase
BAMEG_1151	COG1733	regulation of RNA biosynthetic process
BAMEG_1152	COG2249	NAD(P)H dehydrogenase (quinone) activity
BAMEG_1154	COG0318	PFAM AMP-dependent synthetase and ligase
BAMEG_1156	COG1028	Short-chain dehydrogenase reductase Sdr
BAMEG_1158	COG0384	phenazine biosynthesis protein PhzF
BAMEG_1162	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BAMEG_1165	COG1733	regulation of RNA biosynthetic process
BAMEG_1166	COG1733	regulation of RNA biosynthetic process
BAMEG_1167	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
BAMEG_1169	COG0673	inositol 2-dehydrogenase activity
BAMEG_1171	COG2188	Transcriptional regulator
BAMEG_1172	COG1733	regulation of RNA biosynthetic process
BAMEG_1173	COG1393	Belongs to the ArsC family
BAMEG_1178	COG0814	amino acid
BAMEG_1179	COG0346	lactoylglutathione lyase activity
BAMEG_1182	COG2814	Major facilitator Superfamily
BAMEG_1183	COG0656	L-ascorbic acid biosynthetic process
BAMEG_1188	COG1028	Short-chain dehydrogenase reductase Sdr
BAMEG_1191	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BAMEG_1192	COG0604	alcohol dehydrogenase
BAMEG_1193	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
BAMEG_1194	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
BAMEG_1196	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
BAMEG_1197	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
BAMEG_1199	COG1070	Carbohydrate kinase
BAMEG_1200	COG2706	6-phosphogluconolactonase activity
BAMEG_1201	COG3813	Protein conserved in bacteria
BAMEG_1202	COG1357	PFAM Pentapeptide repeats (8 copies)
BAMEG_1203	COG0697	spore germination
BAMEG_1204	COG0789	Transcriptional regulator
BAMEG_1205	COG1253	flavin adenine dinucleotide binding
BAMEG_1211	COG0477	Major facilitator Superfamily
BAMEG_1213	COG2226	methyltransferase
BAMEG_1218	COG0628	permease
BAMEG_1219	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
BAMEG_1220	COG0180	Tryptophanyl-tRNA synthetase
BAMEG_1222	COG1136	(ABC) transporter
BAMEG_1224	COG0110	maltose O-acetyltransferase activity
BAMEG_1225	COG0738	Major facilitator superfamily
BAMEG_1226	COG1940	carbohydrate kinase activity
BAMEG_1227	COG0346	lactoylglutathione lyase activity
BAMEG_1234	COG1011	Hydrolase
BAMEG_1239	COG1131	(ABC) transporter
BAMEG_1241	COG1028	Short-chain dehydrogenase reductase Sdr
BAMEG_1245	COG0778	Nitroreductase
BAMEG_1246	COG1733	regulation of RNA biosynthetic process
BAMEG_1249	COG0124	histidyl-tRNA synthetase
BAMEG_1250	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BAMEG_1251	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
BAMEG_1252	COG3620	sequence-specific DNA binding
BAMEG_1255	COG2356	endonuclease I
BAMEG_1256	COG1288	antiporter activity
BAMEG_1257	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
BAMEG_1260	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BAMEG_1261	COG1122	ATPase activity
BAMEG_1268	COG2249	NAD(P)H dehydrogenase (quinone) activity
BAMEG_1270	COG2031	fatty acid transporter
BAMEG_1272	COG1309	transcriptional regulator
BAMEG_1273	COG2076	Multidrug Resistance protein
BAMEG_1278	COG1131	(ABC) transporter
BAMEG_1279	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
BAMEG_1282	COG2814	Major facilitator Superfamily
BAMEG_1283	COG1846	Transcriptional regulator
BAMEG_1285	COG0477	Major facilitator Superfamily
BAMEG_1297	COG2207	Transcriptional regulator
BAMEG_1297	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BAMEG_1298	COG0662	Cupin 2, conserved barrel domain protein
BAMEG_1301	COG1595	DNA-templated transcription, initiation
BAMEG_1305	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BAMEG_1308	COG0531	amino acid
BAMEG_1309	COG1522	sequence-specific DNA binding
BAMEG_1310	COG1335	isochorismatase
BAMEG_1312	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
BAMEG_1313	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BAMEG_1315	COG1760	l-serine dehydratase
BAMEG_1316	COG1760	l-serine dehydratase
BAMEG_1317	COG0814	amino acid
BAMEG_1319	COG1309	transcriptional regulator
BAMEG_1320	COG2814	Major facilitator Superfamily
BAMEG_1321	COG2184	nucleotidyltransferase activity
BAMEG_1324	COG0534	Mate efflux family protein
BAMEG_1329	COG0840	transmembrane signaling receptor activity
BAMEG_1332	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BAMEG_1336	COG0457	Tetratricopeptide repeat
BAMEG_1337	COG1609	Transcriptional regulator
BAMEG_1338	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
BAMEG_1339	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
BAMEG_1340	COG0561	phosphatase activity
BAMEG_1341	COG0673	inositol 2-dehydrogenase activity
BAMEG_1342	COG0738	Major facilitator superfamily
BAMEG_1345	COG1619	proteins homologs of microcin C7 resistance protein MccF
BAMEG_1347	COG0583	DNA-binding transcription factor activity
BAMEG_1349	COG1139	Iron-sulfur cluster binding protein
BAMEG_1350	COG1556	Lactate utilization protein
BAMEG_1351	COG2271	Major facilitator Superfamily
BAMEG_1352	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BAMEG_1353	COG2808	Putative FMN-binding domain
BAMEG_1354	COG0456	acetyltransferase
BAMEG_1355	COG0456	acetyltransferase
BAMEG_1356	COG1846	Transcriptional regulator
BAMEG_1357	COG2364	Membrane
BAMEG_1359	COG3850	Histidine kinase
BAMEG_1359	COG5002	protein histidine kinase activity
BAMEG_1362	COG0577	efflux transmembrane transporter activity
BAMEG_1363	COG1136	(ABC) transporter
BAMEG_1366	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
BAMEG_1367	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BAMEG_1369	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BAMEG_1370	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BAMEG_1373	COG1476	TRANSCRIPTIONal
BAMEG_1379	COG2515	1-aminocyclopropane-1-carboxylate deaminase
BAMEG_1384	COG5002	protein histidine kinase activity
BAMEG_1384	COG3850	Histidine kinase
BAMEG_1385	COG0745	RESPONSE REGULATOR receiver
BAMEG_1390	COG2814	Major facilitator Superfamily
BAMEG_1403	COG0346	lactoylglutathione lyase activity
BAMEG_1407	COG1522	sequence-specific DNA binding
BAMEG_1410	COG0443	Heat shock 70 kDa protein
BAMEG_1413	COG0640	Transcriptional regulator
BAMEG_1414	COG0346	lactoylglutathione lyase activity
BAMEG_1415	COG0798	PFAM Bile acid sodium symporter
BAMEG_1421	COG1121	(ABC) transporter
BAMEG_1422	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BAMEG_1423	COG0803	Belongs to the bacterial solute-binding protein 9 family
BAMEG_1424	COG2267	carboxylic ester hydrolase activity
BAMEG_1425	COG1575	Belongs to the MenA family. Type 1 subfamily
BAMEG_1427	COG5609	conserved protein (DUF2294)
BAMEG_1428	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BAMEG_1430	COG0288	reversible hydration of carbon dioxide
BAMEG_1431	COG0415	Belongs to the DNA photolyase family
BAMEG_1438	COG0598	Magnesium transport protein CorA
BAMEG_1439	COG0598	Magnesium transport protein CorA
BAMEG_1440	COG1846	Transcriptional regulator
BAMEG_1441	COG0583	DNA-binding transcription factor activity
BAMEG_1445	COG1335	isochorismatase
BAMEG_1446	COG2267	carboxylic ester hydrolase activity
BAMEG_1447	COG0753	catalase activity
BAMEG_1448	COG0737	Belongs to the 5'-nucleotidase family
BAMEG_1454	COG1115	amino acid carrier protein
BAMEG_1455	COG2066	Belongs to the glutaminase family
BAMEG_1456	COG4191	Histidine kinase
BAMEG_1457	COG4191	Histidine kinase
BAMEG_1458	COG0784	Response regulator, receiver
BAMEG_1461	COG0697	spore germination
BAMEG_1462	COG0531	amino acid
BAMEG_1466	COG0281	malic enzyme
BAMEG_1469	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BAMEG_1470	COG1114	Component of the transport system for branched-chain amino acids
BAMEG_1471	COG0531	amino acid
BAMEG_1472	COG0322	excinuclease ABC activity
BAMEG_1474	COG1396	sequence-specific DNA binding
BAMEG_1475	COG0252	asparaginase activity
BAMEG_1476	COG1027	Aspartate ammonia-lyase
BAMEG_1479	COG1063	alcohol dehydrogenase
BAMEG_1485	COG1113	amino acid transport
BAMEG_1486	COG1113	amino acid transport
BAMEG_1487	COG1280	lysine exporter protein (LysE YggA)
BAMEG_1488	COG3403	YqcI/YcgG family
BAMEG_1489	COG5577	PFAM Coat F domain
BAMEG_1492	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BAMEG_1494	COG3848	Pyruvate phosphate dikinase
BAMEG_1494	COG0574	Belongs to the PEP-utilizing enzyme family
BAMEG_1497	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
BAMEG_1504	COG1960	acyl-CoA dehydrogenase activity
BAMEG_1506	COG0640	Transcriptional regulator
BAMEG_1507	COG0860	N-Acetylmuramoyl-L-alanine amidase
BAMEG_1510	COG1414	Transcriptional regulator
BAMEG_1511	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
BAMEG_1512	COG1984	allophanate hydrolase subunit 2
BAMEG_1518	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
BAMEG_1528	COG4335	DNA alkylation repair
BAMEG_1530	COG0833	amino acid
BAMEG_1533	COG0730	response to heat
BAMEG_1539	COG0596	Alpha beta hydrolase
BAMEG_1540	COG0745	RESPONSE REGULATOR receiver
BAMEG_1541	COG0642	Histidine kinase
BAMEG_1546	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BAMEG_1550	COG0456	acetyltransferase
BAMEG_1551	COG2207	Transcriptional regulator
BAMEG_1556	COG1136	(ABC) transporter
BAMEG_1556	COG0577	efflux transmembrane transporter activity
BAMEG_1558	COG1725	Transcriptional regulator
BAMEG_1567	COG1846	Transcriptional regulator
BAMEG_1568	COG0778	Nitroreductase
BAMEG_1570	COG0714	Associated with various cellular activities
BAMEG_1576	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
BAMEG_1578	COG0753	catalase activity
BAMEG_1579	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BAMEG_1581	COG0463	Glycosyl transferase, family 2
BAMEG_1585	COG0463	Glycosyl transferase, family 2
BAMEG_1589	COG0714	Associated with various cellular activities
BAMEG_1594	COG0346	lactoylglutathione lyase activity
BAMEG_1595	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BAMEG_1597	COG3279	Response regulator of the LytR AlgR family
BAMEG_1599	COG4377	Putative membrane peptidase family (DUF2324)
BAMEG_1602	COG3655	Transcriptional regulator
BAMEG_1604	COG1785	Belongs to the alkaline phosphatase family
BAMEG_1605	COG3239	Fatty acid desaturase
BAMEG_1606	COG1690	Belongs to the RtcB family
BAMEG_1607	COG0833	amino acid
BAMEG_1608	COG1414	Transcriptional regulator
BAMEG_1609	COG4187	Peptidase family M20/M25/M40
BAMEG_1610	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BAMEG_1611	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
BAMEG_1613	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BAMEG_1617	COG2329	Antibiotic biosynthesis monooxygenase
BAMEG_1624	COG1070	Carbohydrate kinase
BAMEG_1625	COG2390	Transcriptional regulator
BAMEG_1628	COG1172	Belongs to the binding-protein-dependent transport system permease family
BAMEG_1630	COG1879	ABC-type sugar transport system periplasmic component
BAMEG_1635	COG1595	DNA-templated transcription, initiation
BAMEG_1637	COG3584	3D domain protein
BAMEG_1637	COG1388	LysM domain
BAMEG_1645	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
BAMEG_1645	COG1605	Chorismate mutase
BAMEG_1646	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
BAMEG_1647	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
BAMEG_1648	COG0287	Prephenate dehydrogenase
BAMEG_1651	COG1309	transcriptional regulator
BAMEG_1652	COG1033	growth of symbiont in host cell
BAMEG_1652	COG2409	Drug exporters of the RND superfamily
BAMEG_1653	COG2409	Drug exporters of the RND superfamily
BAMEG_1653	COG1033	growth of symbiont in host cell
BAMEG_1654	COG1033	growth of symbiont in host cell
BAMEG_1654	COG2409	Drug exporters of the RND superfamily
BAMEG_1656	COG0488	(ABC) transporter
BAMEG_1657	COG1368	sulfuric ester hydrolase activity
BAMEG_1658	COG0861	Integral membrane protein TerC family
BAMEG_1660	COG0726	polysaccharide deacetylase
BAMEG_1663	COG4912	Dna alkylation repair
BAMEG_1667	COG2318	DinB family
BAMEG_1668	COG0697	spore germination
BAMEG_1674	COG2746	aminoglycoside 3-N-acetyltransferase activity
BAMEG_1682	COG1116	anion transmembrane transporter activity
BAMEG_1683	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BAMEG_1684	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BAMEG_1685	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BAMEG_1687	COG0628	permease
BAMEG_1695	COG1131	(ABC) transporter
BAMEG_1699	COG5146	pantothenate kinase activity
BAMEG_1700	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
BAMEG_1701	COG0436	Aminotransferase
BAMEG_1709	COG2226	methyltransferase
BAMEG_1712	COG2261	transglycosylase associated protein
BAMEG_1717	COG0477	Major facilitator Superfamily
BAMEG_1717	COG2814	Major facilitator Superfamily
BAMEG_1718	COG4533	DNA binding
BAMEG_1719	COG0789	Transcriptional regulator
BAMEG_1720	COG1664	Polymer-forming cytoskeletal
BAMEG_1722	COG2814	Major facilitator Superfamily
BAMEG_1726	COG1307	EDD domain protein, DegV family
BAMEG_1729	COG1164	Oligoendopeptidase f
BAMEG_1736	COG0745	RESPONSE REGULATOR receiver
BAMEG_1737	COG5002	protein histidine kinase activity
BAMEG_1738	COG2936	dipeptidyl-peptidase activity
BAMEG_1746	COG4948	Mandelate Racemase Muconate Lactonizing
BAMEG_1748	COG4166	transmembrane transport
BAMEG_1749	COG0519	Catalyzes the synthesis of GMP from XMP
BAMEG_1750	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
BAMEG_1753	COG0586	Pfam SNARE associated Golgi protein
BAMEG_1761	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BAMEG_1762	COG3938	Belongs to the proline racemase family
BAMEG_1764	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BAMEG_1765	COG1012	belongs to the aldehyde dehydrogenase family
BAMEG_1766	COG1115	amino acid carrier protein
BAMEG_1767	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BAMEG_1769	COG3397	chitin binding
BAMEG_1774	COG4637	Psort location Cytoplasmic, score
BAMEG_1778	COG0514	ATP-dependent DNA helicase (RecQ)
BAMEG_1779	COG2105	PFAM AIG2 family protein
BAMEG_1782	COG3973	AAA domain
BAMEG_1792	COG2333	competence protein COMEC
BAMEG_1792	COG0658	competence protein
BAMEG_1798	COG2205	protein histidine kinase activity
BAMEG_1802	COG3397	chitin binding
BAMEG_1804	COG2153	protein acetylation
BAMEG_1805	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
BAMEG_1808	COG0740	serine-type endopeptidase activity
BAMEG_1810	COG0517	IMP dehydrogenase activity
BAMEG_1810	COG4175	Glycine betaine
BAMEG_1811	COG4176	ABC-type proline glycine betaine transport system permease component
BAMEG_1816	COG0456	acetyltransferase
BAMEG_1816	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
BAMEG_1817	COG1028	Short-chain dehydrogenase reductase Sdr
BAMEG_1820	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
BAMEG_1821	COG0022	dehydrogenase e1 component
BAMEG_1822	COG0508	dehydrogenase complex catalyzes the overall conversion of
BAMEG_1823	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BAMEG_1827	COG1959	2 iron, 2 sulfur cluster binding
BAMEG_1831	COG1349	DNA-binding transcription factor activity
BAMEG_1835	COG3284	Transcriptional regulator
BAMEG_1841	COG1309	transcriptional regulator
BAMEG_1842	COG3844	kynureninase activity
BAMEG_1843	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
BAMEG_1844	COG3483	tryptophan 2,3-dioxygenase activity
BAMEG_1847	COG3409	Peptidoglycan-binding domain 1 protein
BAMEG_1847	COG3773	Cell wall hydrolase
BAMEG_1848	COG2959	enzyme of heme biosynthesis
BAMEG_1851	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BAMEG_1852	COG4129	membrane
BAMEG_1858	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BAMEG_1859	COG0697	spore germination
BAMEG_1861	COG0201	protein transport
BAMEG_1865	COG3227	Zinc metalloprotease (Elastase)
BAMEG_1867	COG1523	belongs to the glycosyl hydrolase 13 family
BAMEG_1870	COG0076	glutamate decarboxylase activity
BAMEG_1875	COG1011	Hydrolase
BAMEG_1880	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BAMEG_1889	COG0322	excinuclease ABC activity
BAMEG_1892	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BAMEG_1902	COG3878	Protein conserved in bacteria
BAMEG_1909	COG1051	belongs to the nudix hydrolase family
BAMEG_1910	COG0592	DNA-directed DNA polymerase activity
BAMEG_1911	COG2816	NAD+ diphosphatase activity
BAMEG_1913	COG2223	nitrite transmembrane transporter activity
BAMEG_1921	COG0697	spore germination
BAMEG_1923	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BAMEG_1924	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BAMEG_1927	COG0584	glycerophosphoryl diester phosphodiesterase
BAMEG_1930	COG2814	Major facilitator Superfamily
BAMEG_1935	COG0693	protein deglycase activity
BAMEG_1941	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BAMEG_1944	COG0604	alcohol dehydrogenase
BAMEG_1947	COG2205	protein histidine kinase activity
BAMEG_1950	COG1122	ATPase activity
BAMEG_1953	COG1794	racemase activity, acting on amino acids and derivatives
BAMEG_1954	COG1819	glycosyl
BAMEG_1956	COG5002	protein histidine kinase activity
BAMEG_1958	COG0561	phosphatase activity
BAMEG_1965	COG2124	cytochrome p450
BAMEG_1983	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
BAMEG_1986	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BAMEG_1987	COG0460	homoserine dehydrogenase
BAMEG_1991	COG0577	efflux transmembrane transporter activity
BAMEG_1992	COG0577	efflux transmembrane transporter activity
BAMEG_1993	COG1136	(ABC) transporter
BAMEG_1998	COG2205	protein histidine kinase activity
BAMEG_2000	COG0745	RESPONSE REGULATOR receiver
BAMEG_2002	COG3773	Cell wall hydrolase
BAMEG_2005	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BAMEG_2006	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BAMEG_2009	COG1063	alcohol dehydrogenase
BAMEG_2012	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BAMEG_2016	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
BAMEG_2020	COG2814	Major facilitator Superfamily
BAMEG_2022	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BAMEG_2025	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
BAMEG_2025	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
BAMEG_2036	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
BAMEG_2041	COG1686	Belongs to the peptidase S11 family
BAMEG_2042	COG2318	DinB family
BAMEG_2044	COG0572	uridine kinase
BAMEG_2045	COG1247	-acetyltransferase
BAMEG_2047	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BAMEG_2048	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
BAMEG_2049	COG1024	Enoyl-CoA hydratase
BAMEG_2050	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BAMEG_2051	COG0511	ligase activity, forming carbon-carbon bonds
BAMEG_2052	COG0439	Biotin carboxylase
BAMEG_2053	COG1960	acyl-CoA dehydrogenase activity
BAMEG_2056	COG1309	transcriptional regulator
BAMEG_2058	COG1131	(ABC) transporter
BAMEG_2061	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BAMEG_2062	COG1252	NADH dehydrogenase
BAMEG_2065	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BAMEG_2069	COG1309	transcriptional regulator
BAMEG_2074	COG1876	peptidase activity
BAMEG_2076	COG1476	TRANSCRIPTIONal
BAMEG_2077	COG0457	Tetratricopeptide repeat
BAMEG_2079	COG0737	Belongs to the 5'-nucleotidase family
BAMEG_2080	COG0737	Belongs to the 5'-nucleotidase family
BAMEG_2084	COG3718	enzyme involved in inositol metabolism
BAMEG_2089	COG1012	belongs to the aldehyde dehydrogenase family
BAMEG_2091	COG0673	inositol 2-dehydrogenase activity
BAMEG_2092	COG2814	Major facilitator Superfamily
BAMEG_2093	COG1609	Transcriptional regulator
BAMEG_2094	COG0671	phosphoesterase, PA-phosphatase related
BAMEG_2095	COG2367	Beta-lactamase
BAMEG_2099	COG0768	penicillin binding
BAMEG_2101	COG1595	DNA-templated transcription, initiation
BAMEG_2105	COG2195	Cleaves the N-terminal amino acid of tripeptides
BAMEG_2114	COG1846	Transcriptional regulator
BAMEG_2115	COG3961	Belongs to the TPP enzyme family
BAMEG_2116	COG2226	methyltransferase
BAMEG_2118	COG3615	Tellurite resistance protein tehB
BAMEG_2118	COG0500	methyltransferase
BAMEG_2119	COG0577	efflux transmembrane transporter activity
BAMEG_2119	COG1136	(ABC) transporter
BAMEG_2123	COG1309	transcriptional regulator
BAMEG_2130	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BAMEG_2133	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
BAMEG_2134	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
BAMEG_2135	COG2971	BadF BadG BcrA BcrD
BAMEG_2141	COG1649	PFAM Uncharacterised BCR, COG1649
BAMEG_2147	COG1595	DNA-templated transcription, initiation
BAMEG_2153	COG1396	sequence-specific DNA binding
BAMEG_2156	COG1132	(ABC) transporter
BAMEG_2157	COG1132	(ABC) transporter
BAMEG_2160	COG2258	MOSC domain
BAMEG_2161	COG0583	DNA-binding transcription factor activity
BAMEG_2164	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BAMEG_2165	COG0583	DNA-binding transcription factor activity
BAMEG_2172	COG0561	phosphatase activity
BAMEG_2173	COG0010	Belongs to the arginase family
BAMEG_2176	COG1278	Cold shock
BAMEG_2178	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BAMEG_2186	COG1247	-acetyltransferase
BAMEG_2193	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BAMEG_2201	COG2226	methyltransferase
BAMEG_2206	COG2814	Major facilitator Superfamily
BAMEG_2207	COG0596	Alpha beta hydrolase
BAMEG_2211	COG1136	(ABC) transporter
BAMEG_2212	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
BAMEG_2214	COG1187	pseudouridine synthase activity
BAMEG_2215	COG2329	Antibiotic biosynthesis monooxygenase
BAMEG_2219	COG1115	amino acid carrier protein
BAMEG_2221	COG2318	DinB family
BAMEG_2223	COG0776	regulation of translation
BAMEG_2226	COG2814	Major facilitator Superfamily
BAMEG_2227	COG3251	PFAM MbtH domain protein
BAMEG_2228	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BAMEG_2229	COG3433	isochorismatase activity
BAMEG_2229	COG1535	isochorismatase
BAMEG_2230	COG1021	2,3-dihydroxybenzoate-AMP ligase
BAMEG_2231	COG1169	isochorismate synthase
BAMEG_2232	COG1028	Short-chain dehydrogenase reductase Sdr
BAMEG_2233	COG2223	nitrite transmembrane transporter activity
BAMEG_2240	COG0419	ATPase involved in DNA repair
BAMEG_2241	COG0420	3'-5' exonuclease activity
BAMEG_2244	COG1024	Enoyl-CoA hydratase
BAMEG_2245	COG1280	lysine exporter protein (LysE YggA)
BAMEG_2246	COG1012	belongs to the aldehyde dehydrogenase family
BAMEG_2247	COG2084	Dehydrogenase
BAMEG_2248	COG1960	acyl-CoA dehydrogenase activity
BAMEG_2250	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
BAMEG_2251	COG2079	MmgE PrpD family protein
BAMEG_2252	COG0372	Belongs to the citrate synthase family
BAMEG_2253	COG4841	protein insertion into membrane
BAMEG_2254	COG2814	Major facilitator Superfamily
BAMEG_2255	COG4499	WXG100 protein secretion system (Wss), protein YukC
BAMEG_2255	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BAMEG_2262	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BAMEG_2277	COG1787	Restriction endonuclease
BAMEG_2277	COG1715	Restriction endonuclease
BAMEG_2283	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BAMEG_2284	COG0671	phosphoesterase, PA-phosphatase related
BAMEG_2285	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
BAMEG_2286	COG4326	sporulation control protein
BAMEG_2294	COG1509	lysine 2,3-aminomutase activity
BAMEG_2295	COG3829	transcription factor binding
BAMEG_2296	COG0456	acetyltransferase
BAMEG_2297	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BAMEG_2298	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
BAMEG_2299	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
BAMEG_2300	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BAMEG_2304	COG5506	Protein of unknown function (DUF1694)
BAMEG_2305	COG1012	belongs to the aldehyde dehydrogenase family
BAMEG_2306	COG1253	flavin adenine dinucleotide binding
BAMEG_2313	COG1174	glycine betaine transport
BAMEG_2314	COG0517	IMP dehydrogenase activity
BAMEG_2314	COG1125	glycine betaine transport
BAMEG_2321	COG1070	Carbohydrate kinase
BAMEG_2328	COG1064	alcohol dehydrogenase
BAMEG_2329	COG1737	Transcriptional regulator
BAMEG_2331	COG2197	response regulator
BAMEG_2332	COG2203	Gaf domain
BAMEG_2332	COG4585	Histidine kinase
BAMEG_2333	COG0668	transmembrane transport
BAMEG_2335	COG1051	belongs to the nudix hydrolase family
BAMEG_2336	COG1335	isochorismatase
BAMEG_2340	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BAMEG_2341	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BAMEG_2345	COG0367	asparagine synthase
BAMEG_2346	COG0071	Belongs to the small heat shock protein (HSP20) family
BAMEG_2347	COG1999	signal sequence binding
BAMEG_2348	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
BAMEG_2349	COG1307	EDD domain protein, DegV family
BAMEG_2351	COG0805	protein transport
BAMEG_2353	COG1272	protein, Hemolysin III
BAMEG_2354	COG0204	Acyl-transferase
BAMEG_2355	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
BAMEG_2356	COG0768	penicillin binding
BAMEG_2359	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BAMEG_2363	COG0546	phosphoglycolate phosphatase activity
BAMEG_2366	COG4473	ABC transporter
BAMEG_2367	COG1131	(ABC) transporter
BAMEG_2369	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
BAMEG_2371	COG0456	acetyltransferase
BAMEG_2373	COG1794	racemase activity, acting on amino acids and derivatives
BAMEG_2374	COG1454	alcohol dehydrogenase
BAMEG_2375	COG2610	gluconate transmembrane transporter activity
BAMEG_2380	COG0733	neurotransmitter:sodium symporter activity
BAMEG_2383	COG3850	Histidine kinase
BAMEG_2383	COG5002	protein histidine kinase activity
BAMEG_2384	COG0745	RESPONSE REGULATOR receiver
BAMEG_2385	COG0471	metal ion transport
BAMEG_2386	COG1929	Belongs to the glycerate kinase type-1 family
BAMEG_2406	COG1674	ftsk spoiiie
BAMEG_2410	COG0017	Asparaginyl-tRNA synthetase
BAMEG_2411	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
BAMEG_2414	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
BAMEG_2420	COG0018	arginyl-trna synthetase
BAMEG_2421	COG2521	methyltransferase
BAMEG_2421	COG2136	Putative SAM-dependent methyltransferase
BAMEG_2424	COG1413	lyase activity
BAMEG_2425	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BAMEG_2428	COG0629	single-stranded DNA binding
BAMEG_2431	COG0488	(ABC) transporter
BAMEG_2432	COG1418	mRNA catabolic process
BAMEG_2436	COG5632	N-Acetylmuramoyl-L-alanine amidase
BAMEG_2438	COG2359	stage V sporulation protein S
BAMEG_2445	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
BAMEG_2446	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BAMEG_2447	COG2146	nitrite reductase [NAD(P)H] activity
BAMEG_2448	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
BAMEG_2448	COG1587	Uroporphyrinogen-III synthase
BAMEG_2450	COG1648	precorrin-2 dehydrogenase activity
BAMEG_2453	COG2223	nitrite transmembrane transporter activity
BAMEG_2455	COG0314	molybdopterin synthase activity
BAMEG_2456	COG0303	'Molybdopterin
BAMEG_2457	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BAMEG_2458	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
BAMEG_2459	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BAMEG_2463	COG2181	nitrate reductase activity
BAMEG_2464	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
BAMEG_2465	COG1140	nitrate reductase beta subunit
BAMEG_2466	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
BAMEG_2469	COG0714	Associated with various cellular activities
BAMEG_2470	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
BAMEG_2471	COG1305	Transglutaminase-like
BAMEG_2472	COG0386	Belongs to the glutathione peroxidase family
BAMEG_2477	COG1595	DNA-templated transcription, initiation
BAMEG_2478	COG0604	alcohol dehydrogenase
BAMEG_2480	COG0346	lactoylglutathione lyase activity
BAMEG_2481	COG1082	Xylose isomerase domain protein TIM barrel
BAMEG_2485	COG2226	methyltransferase
BAMEG_2490	COG3874	Sporulation protein YtfJ
BAMEG_2499	COG0456	acetyltransferase
BAMEG_2506	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BAMEG_2507	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BAMEG_2508	COG1819	glycosyl
BAMEG_2512	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BAMEG_2514	COG0561	phosphatase activity
BAMEG_2518	COG2211	Major facilitator Superfamily
BAMEG_2519	COG0154	amidase activity
BAMEG_2521	COG1876	peptidase activity
BAMEG_2523	COG0860	N-Acetylmuramoyl-L-alanine amidase
BAMEG_2526	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BAMEG_2527	COG1114	Component of the transport system for branched-chain amino acids
BAMEG_2530	COG1253	flavin adenine dinucleotide binding
BAMEG_2531	COG2839	Protein conserved in bacteria
BAMEG_2532	COG0702	epimerase
BAMEG_2536	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BAMEG_2537	COG1607	acyl-coa hydrolase
BAMEG_2538	COG3689	TIGRFAM TIGR03943 family protein
BAMEG_2539	COG0701	Predicted permease
BAMEG_2541	COG2244	polysaccharide biosynthetic process
BAMEG_2542	COG0586	Pfam SNARE associated Golgi protein
BAMEG_2543	COG1051	belongs to the nudix hydrolase family
BAMEG_2544	COG5337	Spore coat protein CotH
BAMEG_2546	COG0406	alpha-ribazole phosphatase activity
BAMEG_2549	COG4166	transmembrane transport
BAMEG_2551	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BAMEG_2553	COG0702	epimerase
BAMEG_2555	COG3443	Belongs to the bacterial solute-binding protein 9 family
BAMEG_2555	COG0803	Belongs to the bacterial solute-binding protein 9 family
BAMEG_2564	COG0456	acetyltransferase
BAMEG_2565	COG0523	cobalamin synthesis protein
BAMEG_2566	COG4989	oxidoreductase activity
BAMEG_2568	COG1231	oxidoreductase activity
BAMEG_2570	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BAMEG_2573	COG0783	Belongs to the Dps family
BAMEG_2574	COG3949	Membrane
BAMEG_2577	COG0840	transmembrane signaling receptor activity
BAMEG_2582	COG2814	Major facilitator Superfamily
BAMEG_2583	COG0667	Aldo Keto reductase
BAMEG_2584	COG0640	Transcriptional regulator
BAMEG_2585	COG1404	Belongs to the peptidase S8 family
BAMEG_2586	COG2002	toxin-antitoxin pair type II binding
BAMEG_2587	COG0577	efflux transmembrane transporter activity
BAMEG_2588	COG0577	efflux transmembrane transporter activity
BAMEG_2597	COG1752	Esterase of the alpha-beta hydrolase superfamily
BAMEG_2599	COG1279	arginine transmembrane transporter activity
BAMEG_2600	COG2814	Major facilitator Superfamily
BAMEG_2601	COG2814	Major facilitator Superfamily
BAMEG_2602	COG2814	Major facilitator Superfamily
BAMEG_2604	COG1082	Xylose isomerase domain protein TIM barrel
BAMEG_2607	COG0318	PFAM AMP-dependent synthetase and ligase
BAMEG_2609	COG4264	IucA IucC family
BAMEG_2611	COG1247	-acetyltransferase
BAMEG_2612	COG1285	pathogenesis
BAMEG_2614	COG0726	polysaccharide deacetylase
BAMEG_2615	COG5002	protein histidine kinase activity
BAMEG_2616	COG0745	RESPONSE REGULATOR receiver
BAMEG_2618	COG1316	TRANSCRIPTIONal
BAMEG_2623	COG0460	homoserine dehydrogenase
BAMEG_2629	COG0726	polysaccharide deacetylase
BAMEG_2632	COG0300	oxidoreductase activity
BAMEG_2634	COG5002	protein histidine kinase activity
BAMEG_2635	COG0745	RESPONSE REGULATOR receiver
BAMEG_2636	COG1132	(ABC) transporter
BAMEG_2637	COG1132	(ABC) transporter
BAMEG_2639	COG0791	NLP P60 protein
BAMEG_2639	COG1388	LysM domain
BAMEG_2641	COG1686	Belongs to the peptidase S11 family
BAMEG_2645	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
BAMEG_2646	COG4988	ABC transporter
BAMEG_2647	COG1294	oxidase, subunit
BAMEG_2648	COG1271	oxidase subunit
BAMEG_2650	COG1846	Transcriptional regulator
BAMEG_2654	COG0583	DNA-binding transcription factor activity
BAMEG_2658	COG0411	ABC transporter
BAMEG_2660	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BAMEG_2661	COG2030	dehydratase
BAMEG_2662	COG0318	PFAM AMP-dependent synthetase and ligase
BAMEG_2665	COG0523	cobalamin synthesis protein
BAMEG_2666	COG1231	oxidoreductase activity
BAMEG_2667	COG0039	L-malate dehydrogenase activity
BAMEG_2668	COG0628	permease
BAMEG_2671	COG0778	Nitroreductase
BAMEG_2672	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
BAMEG_2673	COG1959	2 iron, 2 sulfur cluster binding
BAMEG_2674	COG0583	DNA-binding transcription factor activity
BAMEG_2675	COG0697	spore germination
BAMEG_2677	COG4549	nuclear export factor GLE1
BAMEG_2678	COG1276	copper resistance
BAMEG_2678	COG2372	response to copper ion
BAMEG_2681	COG1114	Component of the transport system for branched-chain amino acids
BAMEG_2682	COG1114	Component of the transport system for branched-chain amino acids
BAMEG_2683	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
BAMEG_2689	COG2132	Multicopper oxidase
BAMEG_2690	COG2132	Multicopper oxidase
BAMEG_2691	COG0006	proline dipeptidase activity
BAMEG_2695	COG4224	UPF0291 protein
BAMEG_2696	COG4846	Membrane protein involved in cytochrome C biogenesis
BAMEG_2698	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
BAMEG_2699	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BAMEG_2701	COG2390	Transcriptional regulator
BAMEG_2706	COG0531	amino acid
BAMEG_2707	COG0531	amino acid
BAMEG_2710	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BAMEG_2713	COG1914	H( )-stimulated, divalent metal cation uptake system
BAMEG_2718	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BAMEG_2724	COG4166	transmembrane transport
BAMEG_2725	COG1073	alpha beta
BAMEG_2730	COG0427	acetyl-CoA hydrolase
BAMEG_2731	COG3279	Response regulator of the LytR AlgR family
BAMEG_2733	COG3384	dioxygenase
BAMEG_2734	COG2814	Major facilitator Superfamily
BAMEG_2738	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
BAMEG_2740	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
BAMEG_2741	COG0440	acetolactate synthase activity
BAMEG_2742	COG0028	Belongs to the TPP enzyme family
BAMEG_2743	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BAMEG_2745	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BAMEG_2748	COG2084	Dehydrogenase
BAMEG_2752	COG2323	membrane
BAMEG_2753	COG5566	PFAM Mor transcription activator
BAMEG_2755	COG0733	neurotransmitter:sodium symporter activity
BAMEG_2756	COG2244	polysaccharide biosynthetic process
BAMEG_2759	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
BAMEG_2760	COG2223	nitrite transmembrane transporter activity
BAMEG_2761	COG4166	transmembrane transport
BAMEG_2763	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BAMEG_2765	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BAMEG_2766	COG0477	Major facilitator Superfamily
BAMEG_2767	COG0477	Major facilitator Superfamily
BAMEG_2769	COG1966	Carbon starvation protein
BAMEG_2774	COG0860	N-Acetylmuramoyl-L-alanine amidase
BAMEG_2775	COG1051	belongs to the nudix hydrolase family
BAMEG_2787	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
BAMEG_2789	COG0784	Response regulator, receiver
BAMEG_2790	COG4191	Histidine kinase
BAMEG_2791	COG0281	malic enzyme
BAMEG_2792	COG1027	Aspartate ammonia-lyase
BAMEG_2794	COG0528	UMP kinase activity
BAMEG_2795	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BAMEG_2798	COG1131	(ABC) transporter
BAMEG_2805	COG2733	membrane
BAMEG_2812	COG0785	Cytochrome C biogenesis protein
BAMEG_2816	COG3340	Belongs to the peptidase S51 family
BAMEG_2817	COG0534	Mate efflux family protein
BAMEG_2818	COG0534	Mate efflux family protein
BAMEG_2822	COG0114	fumarate hydratase activity
BAMEG_2823	COG1757	Na H antiporter
BAMEG_2825	COG0438	transferase activity, transferring glycosyl groups
BAMEG_2825	COG1216	Glycosyl transferase, family 2
BAMEG_2827	COG0701	Predicted permease
BAMEG_2828	COG0523	cobalamin synthesis protein
BAMEG_2829	COG0697	spore germination
BAMEG_2830	COG1802	Transcriptional regulator
BAMEG_2836	COG0367	asparagine synthase
BAMEG_2843	COG0406	alpha-ribazole phosphatase activity
BAMEG_2845	COG1686	Belongs to the peptidase S11 family
BAMEG_2850	COG1234	tRNA 3'-trailer cleavage
BAMEG_2851	COG1177	transmembrane transport
BAMEG_2852	COG0725	ABC transporter, periplasmic molybdate-binding protein
BAMEG_2853	COG3842	ATPase activity
BAMEG_2859	COG2329	Antibiotic biosynthesis monooxygenase
BAMEG_2862	COG1309	transcriptional regulator
BAMEG_2867	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
BAMEG_2868	COG4786	Flagellar basal body rod
BAMEG_2869	COG1419	protein localization to endoplasmic reticulum
BAMEG_2870	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
BAMEG_2871	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
BAMEG_2873	COG1987	bacterial-type flagellum assembly
BAMEG_2874	COG1338	Plays a role in the flagellum-specific transport system
BAMEG_2876	COG1776	CheC inhibitor of MCP methylation
BAMEG_2876	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BAMEG_2878	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BAMEG_2880	COG0741	lytic transglycosylase activity
BAMEG_2881	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BAMEG_2886	COG0457	Tetratricopeptide repeat
BAMEG_2886	COG0463	Glycosyl transferase, family 2
BAMEG_2893	COG0463	Glycosyl transferase, family 2
BAMEG_2895	COG0784	Response regulator, receiver
BAMEG_2895	COG0835	chemotaxis
BAMEG_2905	COG1157	protein secretion by the type III secretion system
BAMEG_2907	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BAMEG_2909	COG1766	The M ring may be actively involved in energy transduction
BAMEG_2910	COG1677	Flagellar hook-basal body complex protein FliE
BAMEG_2911	COG1558	bacterial-type flagellum-dependent cell motility
BAMEG_2912	COG1815	bacterial-type flagellum-dependent cell motility
BAMEG_2917	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BAMEG_2923	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
BAMEG_2926	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BAMEG_2926	COG1776	CheC inhibitor of MCP methylation
BAMEG_2927	COG2198	Histidine kinase
BAMEG_2927	COG0643	Histidine kinase
BAMEG_2928	COG0643	Histidine kinase
BAMEG_2928	COG2198	Histidine kinase
BAMEG_2929	COG2201	protein-glutamate methylesterase activity
BAMEG_2930	COG1360	Flagellar Motor Protein
BAMEG_2931	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
BAMEG_2934	COG1923	regulation of RNA biosynthetic process
BAMEG_2945	COG1434	Gram-negative-bacterium-type cell wall biogenesis
BAMEG_2947	COG2323	membrane
BAMEG_2949	COG0789	Transcriptional regulator
BAMEG_2949	COG4978	Transcriptional regulator
BAMEG_2950	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BAMEG_2951	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BAMEG_2952	COG0475	glutathione-regulated potassium exporter activity
BAMEG_2954	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BAMEG_2955	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BAMEG_2956	COG3162	membrane
BAMEG_2959	COG1280	lysine exporter protein (LysE YggA)
BAMEG_2968	COG0328	RNA-DNA hybrid ribonuclease activity
BAMEG_2972	COG0454	-acetyltransferase
BAMEG_2975	COG0438	transferase activity, transferring glycosyl groups
BAMEG_2976	COG1215	transferase activity, transferring glycosyl groups
BAMEG_2979	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
BAMEG_2985	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BAMEG_2989	COG0754	glutathionylspermidine amidase activity
BAMEG_2996	COG0456	acetyltransferase
BAMEG_2998	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
BAMEG_3000	COG2311	Membrane
BAMEG_3001	COG2233	PERMEase
BAMEG_3005	COG0024	Methionine aminopeptidase
BAMEG_3006	COG3173	Aminoglycoside phosphotransferase
BAMEG_3008	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
BAMEG_3009	COG1199	ATP-dependent helicase activity
BAMEG_3011	COG0116	Belongs to the methyltransferase superfamily
BAMEG_3014	COG4474	Belongs to the UPF0398 family
BAMEG_3023	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BAMEG_3023	COG4499	WXG100 protein secretion system (Wss), protein YukC
BAMEG_3025	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
BAMEG_3026	COG3935	DnaD domain protein
BAMEG_3030	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BAMEG_3030	COG1199	ATP-dependent helicase activity
BAMEG_3037	COG0438	transferase activity, transferring glycosyl groups
BAMEG_3038	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
BAMEG_3041	COG1694	Mazg nucleotide pyrophosphohydrolase
BAMEG_3042	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BAMEG_3044	COG2738	Putative neutral zinc metallopeptidase
BAMEG_3047	COG4347	Protein of unknown function (DUF1405)
BAMEG_3049	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
BAMEG_3053	COG0457	Tetratricopeptide repeat
BAMEG_3054	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
BAMEG_3057	COG0105	UTP biosynthetic process
BAMEG_3058	COG0142	geranyltranstransferase activity
BAMEG_3060	COG0142	geranyltranstransferase activity
BAMEG_3063	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
BAMEG_3076	COG0252	asparaginase activity
BAMEG_3077	COG0492	ferredoxin-NADP+ reductase activity
BAMEG_3081	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
BAMEG_3082	COG4862	establishment of competence for transformation
BAMEG_3084	COG1408	metallophosphoesterase
BAMEG_3085	COG1408	metallophosphoesterase
BAMEG_3087	COG1266	CAAX protease self-immunity
BAMEG_3088	COG0514	ATP-dependent DNA helicase (RecQ)
BAMEG_3089	COG4955	Helix-turn-helix domain
BAMEG_3090	COG1141	Ferredoxin
BAMEG_3091	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
BAMEG_3095	COG2096	Adenosyltransferase
BAMEG_3096	COG5002	protein histidine kinase activity
BAMEG_3097	COG0745	RESPONSE REGULATOR receiver
BAMEG_3098	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BAMEG_3099	COG1333	cytochrome c biogenesis protein
BAMEG_3101	COG1187	pseudouridine synthase activity
BAMEG_3102	COG0700	Nucleoside recognition
BAMEG_3103	COG2715	membrane protein required for spore maturation
BAMEG_3104	COG1686	Belongs to the peptidase S11 family
BAMEG_3105	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
BAMEG_3108	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
BAMEG_3108	COG0392	lysyltransferase activity
BAMEG_3112	COG5002	protein histidine kinase activity
BAMEG_3113	COG0582	viral genome integration into host DNA
BAMEG_3115	COG1801	Protein of unknown function DUF72
BAMEG_3116	COG3852	Histidine kinase
BAMEG_3119	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BAMEG_3120	COG1392	Phosphate transport regulator
BAMEG_3121	COG0306	phosphate transporter
BAMEG_3122	COG0730	response to heat
BAMEG_3125	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BAMEG_3125	COG1017	nitric oxide dioxygenase activity
BAMEG_3130	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BAMEG_3132	COG1114	Component of the transport system for branched-chain amino acids
BAMEG_3134	COG2197	response regulator
BAMEG_3135	COG4585	Histidine kinase
BAMEG_3136	COG4758	membrane
BAMEG_3139	COG1757	Na H antiporter
BAMEG_3144	COG0733	neurotransmitter:sodium symporter activity
BAMEG_3145	COG1648	precorrin-2 dehydrogenase activity
BAMEG_3149	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BAMEG_3150	COG0529	Catalyzes the synthesis of activated sulfate
BAMEG_3155	COG0019	diaminopimelate decarboxylase activity
BAMEG_3158	COG1368	sulfuric ester hydrolase activity
BAMEG_3159	COG1183	phosphatidylcholine synthase activity
BAMEG_3162	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
BAMEG_3169	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
BAMEG_3174	COG0473	3-isopropylmalate dehydrogenase activity
BAMEG_3176	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
BAMEG_3177	COG0440	acetolactate synthase activity
BAMEG_3178	COG0028	Belongs to the TPP enzyme family
BAMEG_3179	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BAMEG_3184	COG3874	Sporulation protein YtfJ
BAMEG_3185	COG4709	membrane
BAMEG_3186	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BAMEG_3187	COG1301	dicarboxylic acid transport
BAMEG_3189	COG1846	Transcriptional regulator
BAMEG_3192	COG1968	undecaprenyl-diphosphatase activity
BAMEG_3193	COG0534	Mate efflux family protein
BAMEG_3197	COG3173	Aminoglycoside phosphotransferase
BAMEG_3200	COG0716	FMN binding
BAMEG_3205	COG1696	Membrane protein involved in D-alanine export
BAMEG_3207	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
BAMEG_3208	COG2070	2-Nitropropane dioxygenase
BAMEG_3209	COG1619	proteins homologs of microcin C7 resistance protein MccF
BAMEG_3211	COG1335	isochorismatase
BAMEG_3213	COG1522	sequence-specific DNA binding
BAMEG_3216	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
BAMEG_3217	COG1131	(ABC) transporter
BAMEG_3219	COG1131	(ABC) transporter
BAMEG_3220	COG1725	Transcriptional regulator
BAMEG_3221	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BAMEG_3222	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BAMEG_3224	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BAMEG_3225	COG1780	Probably involved in ribonucleotide reductase function
BAMEG_3232	COG4873	Protein conserved in bacteria
BAMEG_3235	COG0720	synthase
BAMEG_3238	COG5002	protein histidine kinase activity
BAMEG_3240	COG2318	DinB family
BAMEG_3242	COG1846	Transcriptional regulator
BAMEG_3243	COG3852	Histidine kinase
BAMEG_3245	COG2861	carbohydrate metabolic process
BAMEG_3248	COG0235	Class ii aldolase
BAMEG_3253	COG1349	DNA-binding transcription factor activity
BAMEG_3256	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BAMEG_3258	COG3842	ATPase activity
BAMEG_3259	COG3842	ATPase activity
BAMEG_3260	COG1840	ABC-type Fe3 transport system, periplasmic component
BAMEG_3263	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BAMEG_3265	COG3243	poly(R)-hydroxyalkanoic acid synthase
BAMEG_3266	COG1028	Short-chain dehydrogenase reductase Sdr
BAMEG_3270	COG2030	dehydratase
BAMEG_3272	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BAMEG_3273	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BAMEG_3275	COG0861	Integral membrane protein TerC family
BAMEG_3276	COG2116	formate transmembrane transporter activity
BAMEG_3279	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
BAMEG_3283	COG2186	Transcriptional regulator
BAMEG_3284	COG5002	protein histidine kinase activity
BAMEG_3285	COG0745	RESPONSE REGULATOR receiver
BAMEG_3287	COG3835	regulator
BAMEG_3288	COG0277	FAD linked oxidase domain protein
BAMEG_3289	COG0247	lactate metabolic process
BAMEG_3290	COG2340	Cysteine-rich secretory protein family
BAMEG_3292	COG0564	pseudouridine synthase activity
BAMEG_3294	COG2409	Drug exporters of the RND superfamily
BAMEG_3296	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
BAMEG_3297	COG1177	transmembrane transport
BAMEG_3298	COG1176	ABC-type spermidine putrescine transport system, permease component I
BAMEG_3299	COG3842	ATPase activity
BAMEG_3300	COG1012	belongs to the aldehyde dehydrogenase family
BAMEG_3308	COG0681	Belongs to the peptidase S26 family
BAMEG_3309	COG1686	Belongs to the peptidase S11 family
BAMEG_3311	COG2226	methyltransferase
BAMEG_3321	COG1476	TRANSCRIPTIONal
BAMEG_3323	COG0508	dehydrogenase complex catalyzes the overall conversion of
BAMEG_3333	COG5634	Uncharacterized conserved protein (DUF2278)
BAMEG_3334	COG1620	l-lactate permease
BAMEG_3341	COG0512	Glutamine amidotransferase of anthranilate synthase
BAMEG_3341	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
BAMEG_3344	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BAMEG_3345	COG5492	domain, Protein
BAMEG_3348	COG2382	esterase
BAMEG_3349	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
BAMEG_3350	COG2153	protein acetylation
BAMEG_3359	COG1091	dTDP-4-dehydrorhamnose reductase activity
BAMEG_3362	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
BAMEG_3366	COG0457	Tetratricopeptide repeat
BAMEG_3366	COG0463	Glycosyl transferase, family 2
BAMEG_3370	COG1216	Glycosyl transferase, family 2
BAMEG_3371	COG0772	Belongs to the SEDS family
BAMEG_3372	COG0772	Belongs to the SEDS family
BAMEG_3375	COG0564	pseudouridine synthase activity
BAMEG_3376	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
BAMEG_3377	COG2357	RelA SpoT domain protein
BAMEG_3379	COG4116	CYTH
BAMEG_3380	COG2346	COG2346, Truncated hemoglobins
BAMEG_3383	COG1164	Oligoendopeptidase f
BAMEG_3385	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BAMEG_3386	COG4862	establishment of competence for transformation
BAMEG_3387	COG0861	Integral membrane protein TerC family
BAMEG_3388	COG1393	Belongs to the ArsC family
BAMEG_3391	COG4166	transmembrane transport
BAMEG_3392	COG0534	Mate efflux family protein
BAMEG_3393	COG4608	Belongs to the ABC transporter superfamily
BAMEG_3394	COG0444	Belongs to the ABC transporter superfamily
BAMEG_3395	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BAMEG_3396	COG0601	transmembrane transport
BAMEG_3397	COG4166	transmembrane transport
BAMEG_3399	COG0180	Tryptophanyl-tRNA synthetase
BAMEG_3401	COG5504	Zn-dependent protease
BAMEG_3402	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BAMEG_3403	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BAMEG_3406	COG2267	carboxylic ester hydrolase activity
BAMEG_3408	COG0542	response to heat
BAMEG_3411	COG0561	phosphatase activity
BAMEG_3414	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BAMEG_3416	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BAMEG_3418	COG2996	Protein conserved in bacteria
BAMEG_3422	COG0004	ammonium transporteR
BAMEG_3423	COG0753	catalase activity
BAMEG_3425	COG0367	asparagine synthase
BAMEG_3430	COG0179	Fumarylacetoacetate (FAA) hydrolase
BAMEG_3439	COG1074	ATP-dependent DNA helicase activity
BAMEG_3440	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
BAMEG_3442	COG0398	Pfam SNARE associated Golgi protein
BAMEG_3443	COG4903	ComK protein
BAMEG_3446	COG1278	Cold shock
BAMEG_3448	COG2224	Isocitrate lyase
BAMEG_3449	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
BAMEG_3450	COG0497	DNA recombination
BAMEG_3454	COG0697	spore germination
BAMEG_3455	COG0840	transmembrane signaling receptor activity
BAMEG_3456	COG0501	Belongs to the peptidase M48B family
BAMEG_3461	COG0745	RESPONSE REGULATOR receiver
BAMEG_3462	COG2205	protein histidine kinase activity
BAMEG_3465	COG2207	Transcriptional regulator
BAMEG_3465	COG3708	Transcriptional regulator
BAMEG_3466	COG1595	DNA-templated transcription, initiation
BAMEG_3468	COG1078	dGTPase activity
BAMEG_3469	COG1408	metallophosphoesterase
BAMEG_3479	COG3209	COG3209 Rhs family protein
BAMEG_3485	COG0318	PFAM AMP-dependent synthetase and ligase
BAMEG_3487	COG0095	Lipoate-protein ligase
BAMEG_3488	COG1234	tRNA 3'-trailer cleavage
BAMEG_3490	COG1609	Transcriptional regulator
BAMEG_3495	COG1511	domain protein
BAMEG_3496	COG1309	transcriptional regulator
BAMEG_3505	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
BAMEG_3506	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BAMEG_3507	COG2329	Antibiotic biosynthesis monooxygenase
BAMEG_3508	COG3428	Bacterial PH domain
BAMEG_3509	COG3402	PFAM membrane-flanked domain
BAMEG_3517	COG3428	Bacterial PH domain
BAMEG_3519	COG3402	PFAM membrane-flanked domain
BAMEG_3521	COG1309	transcriptional regulator
BAMEG_3524	COG4473	ABC transporter
BAMEG_3525	COG1131	(ABC) transporter
BAMEG_3526	COG0537	adenosine 5'-monophosphoramidase activity
BAMEG_3527	COG4980	gas vesicle protein
BAMEG_3531	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BAMEG_3532	COG3973	AAA domain
BAMEG_3534	COG0477	Major facilitator Superfamily
BAMEG_3535	COG0477	Major facilitator Superfamily
BAMEG_3543	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
BAMEG_3545	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
BAMEG_3546	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
BAMEG_3551	COG2267	carboxylic ester hydrolase activity
BAMEG_3553	COG0457	Tetratricopeptide repeat
BAMEG_3554	COG0346	lactoylglutathione lyase activity
BAMEG_3555	COG0346	lactoylglutathione lyase activity
BAMEG_3556	COG2814	Major facilitator Superfamily
BAMEG_3557	COG1309	transcriptional regulator
BAMEG_3562	COG4717	serine-type aminopeptidase activity
BAMEG_3563	COG0420	3'-5' exonuclease activity
BAMEG_3570	COG0393	Putative heavy-metal-binding
BAMEG_3575	COG2205	protein histidine kinase activity
BAMEG_3575	COG2198	Histidine kinase
BAMEG_3575	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BAMEG_3575	COG0784	Response regulator, receiver
BAMEG_3576	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
BAMEG_3577	COG2208	phosphoserine phosphatase activity
BAMEG_3579	COG1191	sigma factor activity
BAMEG_3584	COG3237	CsbD-like
BAMEG_3594	COG3437	response regulator, receiver
BAMEG_3594	COG2770	Histidine kinase
BAMEG_3602	COG1959	2 iron, 2 sulfur cluster binding
BAMEG_3603	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
BAMEG_3604	COG2376	Dihydroxyacetone kinase
BAMEG_3606	COG2376	Dihydroxyacetone kinase
BAMEG_3610	COG1183	phosphatidylcholine synthase activity
BAMEG_3615	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BAMEG_3615	COG3320	Male sterility
BAMEG_3624	COG0477	Major facilitator Superfamily
BAMEG_3632	COG0305	Participates in initiation and elongation during chromosome replication
BAMEG_3634	COG0789	Transcriptional regulator
BAMEG_3634	COG4978	Transcriptional regulator
BAMEG_3640	COG3181	Tripartite tricarboxylate transporter family receptor
BAMEG_3641	COG4565	transcriptional regulatory protein
BAMEG_3642	COG3290	protein histidine kinase activity
BAMEG_3643	COG0477	Major facilitator Superfamily
BAMEG_3649	COG4608	Belongs to the ABC transporter superfamily
BAMEG_3650	COG0444	Belongs to the ABC transporter superfamily
BAMEG_3651	COG0444	Belongs to the ABC transporter superfamily
BAMEG_3652	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BAMEG_3653	COG0601	transmembrane transport
BAMEG_3661	COG3938	Belongs to the proline racemase family
BAMEG_3665	COG1363	Peptidase, m42
BAMEG_3668	COG1024	Enoyl-CoA hydratase
BAMEG_3671	COG1696	Membrane protein involved in D-alanine export
BAMEG_3674	COG4196	transglutaminase domain protein
BAMEG_3675	COG0860	N-Acetylmuramoyl-L-alanine amidase
BAMEG_3677	COG2244	polysaccharide biosynthetic process
BAMEG_3678	COG0653	protein targeting
BAMEG_3682	COG0659	secondary active sulfate transmembrane transporter activity
BAMEG_3685	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BAMEG_3687	COG5632	N-Acetylmuramoyl-L-alanine amidase
BAMEG_3687	COG3409	Peptidoglycan-binding domain 1 protein
BAMEG_3689	COG0561	phosphatase activity
BAMEG_3692	COG3527	Alpha-acetolactate decarboxylase
BAMEG_3693	COG0028	Belongs to the TPP enzyme family
BAMEG_3699	COG0189	ligase activity
BAMEG_3702	COG1126	abc transporter atp-binding protein
BAMEG_3703	COG0765	amino acid transport
BAMEG_3704	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BAMEG_3705	COG1132	(ABC) transporter
BAMEG_3706	COG1132	(ABC) transporter
BAMEG_3707	COG1132	(ABC) transporter
BAMEG_3708	COG1012	belongs to the aldehyde dehydrogenase family
BAMEG_3710	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
BAMEG_3712	COG0531	amino acid
BAMEG_3714	COG0693	protein deglycase activity
BAMEG_3714	COG0753	catalase activity
BAMEG_3715	COG0693	protein deglycase activity
BAMEG_3717	COG2211	Major facilitator Superfamily
BAMEG_3718	COG4533	DNA binding
BAMEG_3719	COG2249	NAD(P)H dehydrogenase (quinone) activity
BAMEG_3721	COG1733	regulation of RNA biosynthetic process
BAMEG_3722	COG2814	Major facilitator Superfamily
BAMEG_3723	COG1309	transcriptional regulator
BAMEG_3724	COG2076	Multidrug Resistance protein
BAMEG_3725	COG2076	Multidrug Resistance protein
BAMEG_3727	COG1522	sequence-specific DNA binding
BAMEG_3728	COG0697	spore germination
BAMEG_3731	COG2259	Doxx family
BAMEG_3733	COG1263	PTS System
BAMEG_3733	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BAMEG_3735	COG1737	Transcriptional regulator
BAMEG_3737	COG0475	glutathione-regulated potassium exporter activity
BAMEG_3738	COG0531	amino acid
BAMEG_3745	COG0586	Pfam SNARE associated Golgi protein
BAMEG_3753	COG3546	catalase activity
BAMEG_3754	COG1114	Component of the transport system for branched-chain amino acids
BAMEG_3758	COG5522	Integral membrane protein (intg_mem_TP0381)
BAMEG_3760	COG1136	(ABC) transporter
BAMEG_3761	COG0577	efflux transmembrane transporter activity
BAMEG_3762	COG3584	3D domain protein
BAMEG_3762	COG1388	LysM domain
BAMEG_3766	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BAMEG_3767	COG1447	Phosphotransferase system cellobiose-specific component IIA
BAMEG_3768	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BAMEG_3768	COG3711	transcriptional antiterminator
BAMEG_3772	COG1283	sodium-dependent phosphate transmembrane transporter activity
BAMEG_3773	COG0604	alcohol dehydrogenase
BAMEG_3774	COG1316	TRANSCRIPTIONal
BAMEG_3776	COG0730	response to heat
BAMEG_3777	COG2210	Belongs to the sulfur carrier protein TusA family
BAMEG_3779	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BAMEG_3780	COG0425	Belongs to the sulfur carrier protein TusA family
BAMEG_3781	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BAMEG_3781	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BAMEG_3782	COG0425	Belongs to the sulfur carrier protein TusA family
BAMEG_3782	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BAMEG_3783	COG1937	Protein conserved in bacteria
BAMEG_3784	COG0446	pyridine nucleotide-disulphide oxidoreductase
BAMEG_3790	COG2719	SpoVR family
BAMEG_3791	COG0778	Nitroreductase
BAMEG_3800	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
BAMEG_3801	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BAMEG_3803	COG1609	Transcriptional regulator
BAMEG_3804	COG1263	PTS System
BAMEG_3804	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BAMEG_3805	COG1621	beta-fructofuranosidase activity
BAMEG_3806	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BAMEG_3810	COG1028	Short-chain dehydrogenase reductase Sdr
BAMEG_3811	COG2252	PERMEase
BAMEG_3814	COG1846	Transcriptional regulator
BAMEG_3815	COG2814	Major facilitator Superfamily
BAMEG_3816	COG2205	protein histidine kinase activity
BAMEG_3825	COG0351	phosphomethylpyrimidine kinase
BAMEG_3826	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BAMEG_3828	COG2104	thiamine diphosphate biosynthetic process
BAMEG_3829	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BAMEG_3830	COG0352	thiamine-phosphate diphosphorylase activity
BAMEG_3831	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BAMEG_3832	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BAMEG_3833	COG1116	anion transmembrane transporter activity
BAMEG_3834	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
BAMEG_3841	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
BAMEG_3866	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BAMEG_3868	COG0581	inorganic phosphate transmembrane transporter activity
BAMEG_3869	COG0573	inorganic phosphate transmembrane transporter activity
BAMEG_3871	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
BAMEG_3872	COG1918	ferrous iron import across plasma membrane
BAMEG_3872	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
BAMEG_3873	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
BAMEG_3877	COG0531	amino acid
BAMEG_3878	COG0697	spore germination
BAMEG_3879	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BAMEG_3882	COG4990	cell redox homeostasis
BAMEG_3883	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
BAMEG_3884	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BAMEG_3887	COG0569	domain protein
BAMEG_3887	COG0475	glutathione-regulated potassium exporter activity
BAMEG_3892	COG2252	PERMEase
BAMEG_3893	COG1113	amino acid transport
BAMEG_3896	COG1114	Component of the transport system for branched-chain amino acids
BAMEG_3897	COG3104	oligopeptide transport
BAMEG_3900	COG1476	TRANSCRIPTIONal
BAMEG_3901	COG3584	3D domain protein
BAMEG_3901	COG1388	LysM domain
BAMEG_3902	COG0840	transmembrane signaling receptor activity
BAMEG_3903	COG1968	undecaprenyl-diphosphatase activity
BAMEG_3908	COG3568	Endonuclease Exonuclease Phosphatase
BAMEG_3911	COG1063	alcohol dehydrogenase
BAMEG_3916	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
BAMEG_3917	COG1879	ABC-type sugar transport system periplasmic component
BAMEG_3918	COG1172	Belongs to the binding-protein-dependent transport system permease family
BAMEG_3919	COG1129	ABC transporter
BAMEG_3921	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BAMEG_3922	COG1609	Transcriptional regulator
BAMEG_3923	COG0477	Major facilitator Superfamily
BAMEG_3924	COG0477	Major facilitator Superfamily
BAMEG_3925	COG1846	Transcriptional regulator
BAMEG_3926	COG2271	Major facilitator Superfamily
BAMEG_3928	COG4608	Belongs to the ABC transporter superfamily
BAMEG_3929	COG0601	transmembrane transport
BAMEG_3931	COG0747	negative chemotaxis
BAMEG_3934	COG0659	secondary active sulfate transmembrane transporter activity
BAMEG_3937	COG5002	protein histidine kinase activity
BAMEG_3938	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
BAMEG_3939	COG2378	regulation of single-species biofilm formation
BAMEG_3944	COG0833	amino acid
BAMEG_3945	COG0765	amino acid transport
BAMEG_3946	COG0765	amino acid transport
BAMEG_3947	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BAMEG_3948	COG1126	abc transporter atp-binding protein
BAMEG_3949	COG1115	amino acid carrier protein
BAMEG_3950	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
BAMEG_3952	COG0697	spore germination
BAMEG_3955	COG0366	Alpha amylase catalytic
BAMEG_3956	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BAMEG_3956	COG1263	PTS System
BAMEG_3957	COG2188	Transcriptional regulator
BAMEG_3958	COG0531	amino acid
BAMEG_3962	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BAMEG_3963	COG0714	Associated with various cellular activities
BAMEG_3964	COG4548	von Willebrand factor, type A
BAMEG_3966	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BAMEG_3967	COG0156	8-amino-7-oxononanoate synthase activity
BAMEG_3968	COG2226	methyltransferase
BAMEG_3970	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAMEG_3971	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAMEG_3972	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BAMEG_3973	COG3104	oligopeptide transport
BAMEG_3976	COG1620	l-lactate permease
BAMEG_3977	COG1027	Aspartate ammonia-lyase
BAMEG_3978	COG1253	flavin adenine dinucleotide binding
BAMEG_3979	COG0346	lactoylglutathione lyase activity
BAMEG_3980	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BAMEG_3981	COG1316	TRANSCRIPTIONal
BAMEG_3982	COG2720	vancomycin resistance protein
BAMEG_3986	COG3227	Zinc metalloprotease (Elastase)
BAMEG_3989	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
BAMEG_3990	COG2217	Heavy metal translocating P-type atpase
BAMEG_3991	COG0640	Transcriptional regulator
BAMEG_3992	COG0531	amino acid
BAMEG_3995	COG2427	Protein of unknown function (DUF1641)
BAMEG_3997	COG3383	formate dehydrogenase (NAD+) activity
BAMEG_3998	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
BAMEG_3999	COG0456	acetyltransferase
BAMEG_3999	COG0454	-acetyltransferase
BAMEG_4001	COG0745	RESPONSE REGULATOR receiver
BAMEG_4002	COG5002	protein histidine kinase activity
BAMEG_4004	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BAMEG_4007	COG0281	malic enzyme
BAMEG_4008	COG3493	citrate carrier protein
BAMEG_4009	COG4565	transcriptional regulatory protein
BAMEG_4010	COG3290	protein histidine kinase activity
BAMEG_4012	COG4990	cell redox homeostasis
BAMEG_4014	COG5002	protein histidine kinase activity
BAMEG_4015	COG0745	RESPONSE REGULATOR receiver
BAMEG_4016	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
BAMEG_4018	COG0395	ABC-type sugar transport system, permease component
BAMEG_4019	COG1175	transmembrane transport
BAMEG_4020	COG3842	ATPase activity
BAMEG_4021	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
BAMEG_4025	COG2851	Citrate transporter
BAMEG_4026	COG4565	transcriptional regulatory protein
BAMEG_4027	COG3290	protein histidine kinase activity
BAMEG_4029	COG2268	Band 7 protein
BAMEG_4030	COG1585	Membrane protein implicated in regulation of membrane protease activity
BAMEG_4032	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BAMEG_4036	COG2766	serine protein kinase
BAMEG_4038	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
BAMEG_4040	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
BAMEG_4042	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
BAMEG_4043	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
BAMEG_4068	COG0735	belongs to the Fur family
BAMEG_4069	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
BAMEG_4073	COG4555	ABC transporter
BAMEG_4075	COG0070	glutamate synthase
BAMEG_4075	COG0067	glutamate synthase
BAMEG_4075	COG0069	glutamate synthase activity
BAMEG_4076	COG4129	membrane
BAMEG_4077	COG1132	(ABC) transporter
BAMEG_4084	COG1194	a g-specific adenine glycosylase
BAMEG_4085	COG1988	membrane-bound metal-dependent
BAMEG_4091	COG1090	epimerase
BAMEG_4092	COG1228	amidohydrolase
BAMEG_4096	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BAMEG_4099	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
BAMEG_4099	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BAMEG_4102	COG0463	Glycosyl transferase, family 2
BAMEG_4105	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BAMEG_4106	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BAMEG_4107	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BAMEG_4107	COG1263	PTS System
BAMEG_4109	COG2066	Belongs to the glutaminase family
BAMEG_4114	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BAMEG_4115	COG0833	amino acid
BAMEG_4117	COG3829	transcription factor binding
BAMEG_4119	COG0101	tRNA pseudouridine synthase activity
BAMEG_4145	COG0582	viral genome integration into host DNA
BAMEG_4162	COG1484	DNA-dependent DNA replication
BAMEG_4168	COG1396	sequence-specific DNA binding
BAMEG_4175	COG0582	viral genome integration into host DNA
BAMEG_4177	COG3480	Lon protease (S16) C-terminal proteolytic domain
BAMEG_4178	COG1752	Esterase of the alpha-beta hydrolase superfamily
BAMEG_4180	COG3314	Sporulation integral membrane protein YlbJ
BAMEG_4181	COG0742	ribosomal rna small subunit methyltransferase
BAMEG_4186	COG3679	Belongs to the UPF0342 family
BAMEG_4187	COG0406	alpha-ribazole phosphatase activity
BAMEG_4190	COG2340	Cysteine-rich secretory protein family
BAMEG_4193	COG3336	cytochrome c oxidase
BAMEG_4200	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
BAMEG_4201	COG0772	Belongs to the SEDS family
BAMEG_4202	COG4838	Belongs to the UPF0358 family
BAMEG_4203	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
BAMEG_4204	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
BAMEG_4206	COG4896	Protein conserved in bacteria
BAMEG_4211	COG0483	inositol monophosphate 1-phosphatase activity
BAMEG_4215	COG1982	Orn Lys Arg decarboxylase major
BAMEG_4223	COG0508	dehydrogenase complex catalyzes the overall conversion of
BAMEG_4224	COG0022	dehydrogenase e1 component
BAMEG_4225	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
BAMEG_4227	COG0242	peptide deformylase activity
BAMEG_4228	COG0561	phosphatase activity
BAMEG_4230	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BAMEG_4231	COG0569	domain protein
BAMEG_4235	COG0583	DNA-binding transcription factor activity
BAMEG_4236	COG0517	IMP dehydrogenase activity
BAMEG_4238	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
BAMEG_4240	COG4703	Protein of unknown function (DUF1797)
BAMEG_4244	COG2200	EAL domain
BAMEG_4245	COG1028	Short-chain dehydrogenase reductase Sdr
BAMEG_4246	COG1408	metallophosphoesterase
BAMEG_4248	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
BAMEG_4256	COG2814	Major facilitator Superfamily
BAMEG_4261	COG3209	COG3209 Rhs family protein
BAMEG_4263	COG2205	protein histidine kinase activity
BAMEG_4265	COG0436	Aminotransferase
BAMEG_4266	COG1609	Transcriptional regulator
BAMEG_4268	COG3833	ABC-type maltose transport systems, permease component
BAMEG_4269	COG1175	transmembrane transport
BAMEG_4270	COG2182	Extracellular solute-binding protein
BAMEG_4272	COG0366	Alpha amylase catalytic
BAMEG_4273	COG3842	ATPase activity
BAMEG_4280	COG0183	Belongs to the thiolase family
BAMEG_4287	COG1695	Transcriptional regulator
BAMEG_4288	COG1028	Short-chain dehydrogenase reductase Sdr
BAMEG_4293	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BAMEG_4294	COG0436	Aminotransferase
BAMEG_4299	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
BAMEG_4302	COG2084	Dehydrogenase
BAMEG_4303	COG2084	Dehydrogenase
BAMEG_4304	COG3706	GGDEF domain
BAMEG_4305	COG0778	Nitroreductase
BAMEG_4310	COG2190	(PTS) system
BAMEG_4310	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BAMEG_4310	COG1263	PTS System
BAMEG_4311	COG3711	transcriptional antiterminator
BAMEG_4319	COG1547	Domain of unknown function (DUF309)
BAMEG_4320	COG0456	acetyltransferase
BAMEG_4322	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BAMEG_4323	COG4086	secreted protein
BAMEG_4324	COG0561	phosphatase activity
BAMEG_4325	COG0697	spore germination
BAMEG_4328	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BAMEG_4333	COG0733	neurotransmitter:sodium symporter activity
BAMEG_4337	COG1686	Belongs to the peptidase S11 family
BAMEG_4338	COG1725	Transcriptional regulator
BAMEG_4339	COG1131	(ABC) transporter
BAMEG_4342	COG1846	Transcriptional regulator
BAMEG_4345	COG0598	Magnesium transport protein CorA
BAMEG_4350	COG4974	Belongs to the 'phage' integrase family
BAMEG_4352	COG0735	belongs to the Fur family
BAMEG_4353	COG1300	Membrane
BAMEG_4357	COG0667	Aldo Keto reductase
BAMEG_4358	COG0656	L-ascorbic acid biosynthetic process
BAMEG_4359	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
BAMEG_4359	COG0456	acetyltransferase
BAMEG_4361	COG1525	nuclease
BAMEG_4361	COG4085	toxin activity
BAMEG_4361	COG0737	Belongs to the 5'-nucleotidase family
BAMEG_4363	COG0596	Alpha beta hydrolase
BAMEG_4364	COG2056	Na+-H+ antiporter family
BAMEG_4365	COG1609	Transcriptional regulator
BAMEG_4366	COG0456	acetyltransferase
BAMEG_4368	COG1073	alpha beta
BAMEG_4371	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BAMEG_4371	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BAMEG_4372	COG0307	riboflavin synthase, alpha
BAMEG_4376	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
BAMEG_4377	COG4106	trans-aconitate 2-methyltransferase activity
BAMEG_4378	COG2226	methyltransferase
BAMEG_4378	COG1073	alpha beta
BAMEG_4379	COG0156	8-amino-7-oxononanoate synthase activity
BAMEG_4381	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BAMEG_4385	COG0737	Belongs to the 5'-nucleotidase family
BAMEG_4387	COG1522	sequence-specific DNA binding
BAMEG_4391	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BAMEG_4393	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
BAMEG_4396	COG0300	oxidoreductase activity
BAMEG_4397	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BAMEG_4399	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BAMEG_4400	COG1760	l-serine dehydratase
BAMEG_4401	COG1760	l-serine dehydratase
BAMEG_4405	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BAMEG_4406	COG2195	Cleaves the N-terminal amino acid of tripeptides
BAMEG_4407	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BAMEG_4409	COG1376	ErfK ybiS ycfS ynhG family protein
BAMEG_4410	COG4129	membrane
BAMEG_4411	COG1126	abc transporter atp-binding protein
BAMEG_4412	COG0765	amino acid transport
BAMEG_4413	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BAMEG_4417	COG2816	NAD+ diphosphatase activity
BAMEG_4418	COG0772	Belongs to the SEDS family
BAMEG_4419	COG0508	dehydrogenase complex catalyzes the overall conversion of
BAMEG_4420	COG0022	dehydrogenase e1 component
BAMEG_4421	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
BAMEG_4422	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BAMEG_4424	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
BAMEG_4425	COG0280	phosphate acetyltransferase
BAMEG_4426	COG3829	transcription factor binding
BAMEG_4426	COG3290	protein histidine kinase activity
BAMEG_4428	COG0584	glycerophosphoryl diester phosphodiesterase
BAMEG_4429	COG3093	addiction module antidote protein HigA
BAMEG_4431	COG0745	RESPONSE REGULATOR receiver
BAMEG_4432	COG0750	zinc metalloprotease
BAMEG_4433	COG0497	DNA recombination
BAMEG_4435	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
BAMEG_4437	COG0142	geranyltranstransferase activity
BAMEG_4442	COG1302	Protein conserved in bacteria
BAMEG_4443	COG0439	Biotin carboxylase
BAMEG_4444	COG0511	ligase activity, forming carbon-carbon bonds
BAMEG_4452	COG3854	ATPases associated with a variety of cellular activities
BAMEG_4456	COG0006	proline dipeptidase activity
BAMEG_4459	COG3872	metal-dependent enzyme
BAMEG_4460	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BAMEG_4466	COG0095	Lipoate-protein ligase
BAMEG_4467	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BAMEG_4468	COG1609	Transcriptional regulator
BAMEG_4470	COG2076	Multidrug Resistance protein
BAMEG_4471	COG2076	Multidrug Resistance protein
BAMEG_4478	COG1131	(ABC) transporter
BAMEG_4479	COG1725	Transcriptional regulator
BAMEG_4485	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
BAMEG_4498	COG4970	Tfp pilus assembly protein FimT
BAMEG_4500	COG1459	type II secretion system
BAMEG_4501	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BAMEG_4511	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
BAMEG_4512	COG1410	methionine synthase
BAMEG_4512	COG0646	methionine synthase
BAMEG_4513	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
BAMEG_4513	COG0646	methionine synthase
BAMEG_4516	COG0626	cystathionine gamma-synthase activity
BAMEG_4517	COG0626	cystathionine gamma-synthase activity
BAMEG_4521	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BAMEG_4523	COG1940	carbohydrate kinase activity
BAMEG_4524	COG4483	Protein conserved in bacteria
BAMEG_4525	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
BAMEG_4528	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
BAMEG_4529	COG0704	Plays a role in the regulation of phosphate uptake
BAMEG_4530	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
BAMEG_4531	COG0581	inorganic phosphate transmembrane transporter activity
BAMEG_4532	COG0573	inorganic phosphate transmembrane transporter activity
BAMEG_4533	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
BAMEG_4535	COG0477	Major facilitator Superfamily
BAMEG_4536	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
BAMEG_4541	COG0735	belongs to the Fur family
BAMEG_4542	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BAMEG_4543	COG1121	(ABC) transporter
BAMEG_4544	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BAMEG_4551	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
BAMEG_4552	COG2384	SAM-dependent methyltransferase
BAMEG_4553	COG2010	Cytochrome c
BAMEG_4554	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BAMEG_4555	COG0358	DNA primase activity
BAMEG_4559	COG0517	IMP dehydrogenase activity
BAMEG_4562	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
BAMEG_4563	COG0295	cytidine deaminase activity
BAMEG_4564	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
BAMEG_4566	COG1480	7TM receptor with intracellular HD hydrolase
BAMEG_4567	COG1702	phosphate starvation-inducible protein PhoH
BAMEG_4570	COG1610	YqeY-like protein
BAMEG_4572	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
BAMEG_4573	COG1385	rRNA (uridine-N3-)-methyltransferase activity
BAMEG_4577	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
BAMEG_4579	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BAMEG_4580	COG1733	regulation of RNA biosynthetic process
BAMEG_4585	COG1466	dna polymerase III delta subunit
BAMEG_4587	COG2333	competence protein COMEC
BAMEG_4587	COG0658	competence protein
BAMEG_4589	COG2131	deaminase
BAMEG_4590	COG1555	photosystem II stabilization
BAMEG_4590	COG1596	polysaccharide export
BAMEG_4591	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BAMEG_4592	COG2226	methyltransferase
BAMEG_4593	COG0799	negative regulation of ribosome biogenesis
BAMEG_4594	COG1713	HD superfamily hydrolase involved in NAD metabolism
BAMEG_4596	COG1534	Rna-binding protein
BAMEG_4598	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
BAMEG_4599	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
BAMEG_4602	COG1191	sigma factor activity
BAMEG_4605	COG1595	DNA-templated transcription, initiation
BAMEG_4607	COG0778	Nitroreductase
BAMEG_4609	COG2357	RelA SpoT domain protein
BAMEG_4611	COG1785	Belongs to the alkaline phosphatase family
BAMEG_4614	COG2267	carboxylic ester hydrolase activity
BAMEG_4621	COG1404	Belongs to the peptidase S8 family
BAMEG_4622	COG3186	Phenylalanine-4-hydroxylase
BAMEG_4624	COG2514	catechol 2,3-dioxygenase activity
BAMEG_4625	COG2514	catechol 2,3-dioxygenase activity
BAMEG_4626	COG2259	Doxx family
BAMEG_4634	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BAMEG_4636	COG1454	alcohol dehydrogenase
BAMEG_4636	COG1012	belongs to the aldehyde dehydrogenase family
BAMEG_4637	COG0626	cystathionine gamma-synthase activity
BAMEG_4638	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
BAMEG_4643	COG0768	penicillin binding
BAMEG_4649	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
BAMEG_4653	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
BAMEG_4655	COG0628	permease
BAMEG_4659	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
BAMEG_4661	COG0482	sulfurtransferase activity
BAMEG_4662	COG1104	cysteine desulfurase activity
BAMEG_4663	COG1959	2 iron, 2 sulfur cluster binding
BAMEG_4664	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
BAMEG_4666	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
BAMEG_4668	COG0124	histidyl-tRNA synthetase
BAMEG_4671	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BAMEG_4673	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
BAMEG_4673	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
BAMEG_4674	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
BAMEG_4675	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BAMEG_4675	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BAMEG_4677	COG2244	polysaccharide biosynthetic process
BAMEG_4678	COG2323	membrane
BAMEG_4680	COG1862	Preprotein translocase
BAMEG_4686	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
BAMEG_4688	COG0697	spore germination
BAMEG_4689	COG0697	spore germination
BAMEG_4690	COG0640	Transcriptional regulator
BAMEG_4695	COG0157	Belongs to the NadC ModD family
BAMEG_4696	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
BAMEG_4697	COG1104	cysteine desulfurase activity
BAMEG_4698	COG1827	regulation of RNA biosynthetic process
BAMEG_4699	COG2258	MOSC domain
BAMEG_4700	COG0077	Prephenate dehydratase
BAMEG_4701	COG0577	efflux transmembrane transporter activity
BAMEG_4702	COG0577	efflux transmembrane transporter activity
BAMEG_4703	COG1136	(ABC) transporter
BAMEG_4704	COG5002	protein histidine kinase activity
BAMEG_4706	COG0745	RESPONSE REGULATOR receiver
BAMEG_4707	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
BAMEG_4708	COG3290	protein histidine kinase activity
BAMEG_4710	COG2868	ribosomal protein
BAMEG_4713	COG1530	ribonuclease E activity
BAMEG_4714	COG1994	Peptidase M50
BAMEG_4715	COG0739	heme binding
BAMEG_4716	COG2894	cell division
BAMEG_4719	COG1792	Involved in formation and maintenance of cell shape
BAMEG_4720	COG1077	Cell shape determining protein MreB Mrl
BAMEG_4724	COG0285	dihydrofolate synthase activity
BAMEG_4725	COG0525	valine-tRNA ligase activity
BAMEG_4727	COG1388	LysM domain
BAMEG_4729	COG0113	porphobilinogen synthase activity
BAMEG_4730	COG1587	Uroporphyrinogen-III synthase
BAMEG_4732	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BAMEG_4734	COG1846	Transcriptional regulator
BAMEG_4735	COG1764	response to oxidative stress
BAMEG_4739	COG0470	DNA polymerase III
BAMEG_4739	COG1067	ATP-dependent peptidase activity
BAMEG_4749	COG0622	Phosphoesterase
BAMEG_4750	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
BAMEG_4752	COG5401	PFAM Sporulation and spore germination
BAMEG_4757	COG1309	transcriptional regulator
BAMEG_4760	COG2197	response regulator
BAMEG_4761	COG2233	PERMEase
BAMEG_4763	COG0402	S-adenosylhomocysteine deaminase activity
BAMEG_4764	COG0402	S-adenosylhomocysteine deaminase activity
BAMEG_4768	COG0444	Belongs to the ABC transporter superfamily
BAMEG_4769	COG4608	Belongs to the ABC transporter superfamily
BAMEG_4770	COG3275	phosphorelay sensor kinase activity
BAMEG_4771	COG3279	Response regulator of the LytR AlgR family
BAMEG_4774	COG1983	PspC domain protein
BAMEG_4775	COG1396	sequence-specific DNA binding
BAMEG_4776	COG0697	spore germination
BAMEG_4778	COG1959	2 iron, 2 sulfur cluster binding
BAMEG_4779	COG1668	transmembrane transport
BAMEG_4780	COG4152	abc transporter atp-binding protein
BAMEG_4781	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
BAMEG_4782	COG1360	Flagellar Motor Protein
BAMEG_4783	COG1360	Flagellar Motor Protein
BAMEG_4784	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
BAMEG_4785	COG1876	peptidase activity
BAMEG_4786	COG0824	Thioesterase
BAMEG_4787	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
BAMEG_4788	COG1053	succinate dehydrogenase
BAMEG_4789	COG2009	succinate dehydrogenase
BAMEG_4790	COG1719	4-vinyl reductase, 4VR
BAMEG_4792	COG3118	belongs to the thioredoxin family
BAMEG_4793	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
BAMEG_4794	COG2086	electron transfer activity
BAMEG_4795	COG1024	Enoyl-CoA hydratase
BAMEG_4796	COG1309	transcriptional regulator
BAMEG_4797	COG0318	PFAM AMP-dependent synthetase and ligase
BAMEG_4802	COG2318	DinB family
BAMEG_4807	COG1131	(ABC) transporter
BAMEG_4808	COG2205	protein histidine kinase activity
BAMEG_4809	COG0745	RESPONSE REGULATOR receiver
BAMEG_4811	COG4895	conserved protein (DUF2196)
BAMEG_4812	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
BAMEG_4815	COG4509	Sortase family
BAMEG_4816	COG1120	ATPase activity
BAMEG_4819	COG5386	Cell surface protein
BAMEG_4821	COG5386	Cell surface protein
BAMEG_4822	COG1114	Component of the transport system for branched-chain amino acids
BAMEG_4823	COG1187	pseudouridine synthase activity
BAMEG_4825	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
BAMEG_4825	COG1796	DNA polymerase
BAMEG_4826	COG1286	toxin biosynthetic process
BAMEG_4832	COG0017	Asparaginyl-tRNA synthetase
BAMEG_4833	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BAMEG_4833	COG0072	phenylalanine-tRNA ligase activity
BAMEG_4835	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BAMEG_4837	COG1418	mRNA catabolic process
BAMEG_4842	COG2814	Major facilitator Superfamily
BAMEG_4843	COG1566	PFAM secretion protein HlyD family protein
BAMEG_4844	COG1309	transcriptional regulator
BAMEG_4845	COG1363	Peptidase, m42
BAMEG_4849	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
BAMEG_4851	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
BAMEG_4853	COG1484	DNA-dependent DNA replication
BAMEG_4854	COG3611	Membrane attachment protein
BAMEG_4856	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
BAMEG_4858	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BAMEG_4859	COG0237	dephospho-CoA kinase activity
BAMEG_4860	COG1971	Probably functions as a manganese efflux pump
BAMEG_4861	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
BAMEG_4862	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BAMEG_4862	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BAMEG_4863	COG5002	protein histidine kinase activity
BAMEG_4864	COG0745	RESPONSE REGULATOR receiver
BAMEG_4869	COG0538	isocitrate dehydrogenase activity
BAMEG_4870	COG0372	Belongs to the citrate synthase family
BAMEG_4872	COG0628	permease
BAMEG_4873	COG3030	protein affecting phage T7 exclusion by the F plasmid
BAMEG_4878	COG1725	Transcriptional regulator
BAMEG_4879	COG0281	malic enzyme
BAMEG_4880	COG0587	DNA-directed DNA polymerase activity
BAMEG_4884	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
BAMEG_4889	COG4109	DRTGG domain
BAMEG_4890	COG4109	DRTGG domain
BAMEG_4893	COG0006	proline dipeptidase activity
BAMEG_4900	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BAMEG_4901	COG0662	Cupin 2, conserved barrel domain protein
BAMEG_4903	COG1476	TRANSCRIPTIONal
BAMEG_4906	COG1028	Short-chain dehydrogenase reductase Sdr
BAMEG_4907	COG0589	response to stress
BAMEG_4916	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BAMEG_4920	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BAMEG_4921	COG0827	DNA restriction-modification system
BAMEG_4922	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
BAMEG_4923	COG3874	Sporulation protein YtfJ
BAMEG_4925	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
BAMEG_4926	COG1574	metal-dependent hydrolase with the TIM-barrel fold
BAMEG_4928	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BAMEG_4931	COG1104	cysteine desulfurase activity
BAMEG_4934	COG0583	DNA-binding transcription factor activity
BAMEG_4935	COG0697	spore germination
BAMEG_4936	COG1309	transcriptional regulator
BAMEG_4937	COG1309	transcriptional regulator
BAMEG_4938	COG1956	GAF domain-containing protein
BAMEG_4939	COG0626	cystathionine gamma-synthase activity
BAMEG_4943	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
BAMEG_4945	COG1595	DNA-templated transcription, initiation
BAMEG_4947	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BAMEG_4948	COG0454	-acetyltransferase
BAMEG_4949	COG0517	IMP dehydrogenase activity
BAMEG_4950	COG0123	including yeast histone deacetylase and acetoin utilization protein
BAMEG_4952	COG0745	RESPONSE REGULATOR receiver
BAMEG_4954	COG0666	response to abiotic stimulus
BAMEG_4961	COG1609	Transcriptional regulator
BAMEG_4962	COG4851	CamS sex pheromone cAM373 precursor
BAMEG_4963	COG3118	belongs to the thioredoxin family
BAMEG_4965	COG2309	aminopeptidase activity
BAMEG_4968	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BAMEG_4971	COG1674	ftsk spoiiie
BAMEG_4973	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BAMEG_4974	COG4848	Belongs to the UPF0354 family
BAMEG_4975	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BAMEG_4976	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
BAMEG_4977	COG1363	Peptidase, m42
BAMEG_4979	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BAMEG_4982	COG0510	thiamine kinase activity
BAMEG_4983	COG1523	belongs to the glycosyl hydrolase 13 family
BAMEG_4985	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BAMEG_4986	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BAMEG_4987	COG1349	DNA-binding transcription factor activity
BAMEG_4988	COG1187	pseudouridine synthase activity
BAMEG_4989	COG2244	polysaccharide biosynthetic process
BAMEG_4990	COG2081	HI0933 family
BAMEG_4992	COG2814	Major facilitator Superfamily
BAMEG_4994	COG3832	glyoxalase III activity
BAMEG_4998	COG1329	Transcriptional regulator
BAMEG_5000	COG4975	Glucose uptake
BAMEG_5003	COG0314	molybdopterin synthase activity
BAMEG_5004	COG1763	Mo-molybdopterin cofactor biosynthetic process
BAMEG_5005	COG0303	'Molybdopterin
BAMEG_5007	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BAMEG_5008	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
BAMEG_5009	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
BAMEG_5013	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BAMEG_5015	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
BAMEG_5026	COG2814	Major facilitator Superfamily
BAMEG_5027	COG0475	glutathione-regulated potassium exporter activity
BAMEG_5028	COG0490	domain, Protein
BAMEG_5029	COG0582	viral genome integration into host DNA
BAMEG_5031	COG1136	(ABC) transporter
BAMEG_5035	COG1242	4 iron, 4 sulfur cluster binding
BAMEG_5036	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
BAMEG_5037	COG1131	(ABC) transporter
BAMEG_5039	COG1794	racemase activity, acting on amino acids and derivatives
BAMEG_5043	COG2267	carboxylic ester hydrolase activity
BAMEG_5045	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
BAMEG_5046	COG0671	phosphoesterase, PA-phosphatase related
BAMEG_5047	COG0438	transferase activity, transferring glycosyl groups
BAMEG_5049	COG0521	Mo-molybdopterin cofactor biosynthetic process
BAMEG_5062	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
BAMEG_5063	COG5002	protein histidine kinase activity
BAMEG_5064	COG4191	Histidine kinase
BAMEG_5065	COG2267	carboxylic ester hydrolase activity
BAMEG_5066	COG1368	sulfuric ester hydrolase activity
BAMEG_5070	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BAMEG_5071	COG1116	anion transmembrane transporter activity
BAMEG_5072	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BAMEG_5075	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
BAMEG_5077	COG0494	nUDIX hydrolase
BAMEG_5082	COG0288	reversible hydration of carbon dioxide
BAMEG_5084	COG1271	oxidase subunit
BAMEG_5085	COG1294	oxidase, subunit
BAMEG_5090	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BAMEG_5095	COG1842	Phage shock protein A
BAMEG_5102	COG5002	protein histidine kinase activity
BAMEG_5103	COG0745	RESPONSE REGULATOR receiver
BAMEG_5109	COG1597	lipid kinase activity
BAMEG_5116	COG0586	Pfam SNARE associated Golgi protein
BAMEG_5118	COG0577	efflux transmembrane transporter activity
BAMEG_5119	COG1136	(ABC) transporter
BAMEG_5120	COG3708	Transcriptional regulator
BAMEG_5120	COG2207	Transcriptional regulator
BAMEG_5121	COG0745	RESPONSE REGULATOR receiver
BAMEG_5122	COG2205	protein histidine kinase activity
BAMEG_5124	COG0577	efflux transmembrane transporter activity
BAMEG_5125	COG0577	efflux transmembrane transporter activity
BAMEG_5126	COG1136	(ABC) transporter
BAMEG_5127	COG0577	efflux transmembrane transporter activity
BAMEG_5128	COG0577	efflux transmembrane transporter activity
BAMEG_5135	COG3964	amidohydrolase
BAMEG_5141	COG4948	Mandelate Racemase Muconate Lactonizing
BAMEG_5143	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
BAMEG_5144	COG0596	Alpha beta hydrolase
BAMEG_5145	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
BAMEG_5146	COG1169	isochorismate synthase
BAMEG_5147	COG1575	Belongs to the MenA family. Type 1 subfamily
BAMEG_5148	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
BAMEG_5149	COG1278	Cold shock
BAMEG_5152	COG0058	SHG alpha-glucan phosphorylase activity
BAMEG_5153	COG0297	glycogen (starch) synthase activity
BAMEG_5154	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
BAMEG_5155	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
BAMEG_5157	COG0039	L-malate dehydrogenase activity
BAMEG_5184	COG1285	pathogenesis
BAMEG_5186	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
BAMEG_5187	COG0166	Belongs to the GPI family
BAMEG_5188	COG2155	Conserved Protein
BAMEG_5189	COG1098	S1 RNA binding domain
BAMEG_5190	COG0436	Aminotransferase
BAMEG_5191	COG1522	sequence-specific DNA binding
BAMEG_5192	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BAMEG_5193	COG2267	carboxylic ester hydrolase activity
BAMEG_5195	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
BAMEG_5199	COG5018	Exonuclease
BAMEG_5200	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
BAMEG_5204	COG0423	glycine-tRNA ligase activity
BAMEG_5205	COG2050	protein possibly involved in aromatic compounds catabolism
BAMEG_5207	COG1268	BioY protein
BAMEG_5209	COG1210	Utp--glucose-1-phosphate uridylyltransferase
BAMEG_5210	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BAMEG_5214	COG3584	3D domain protein
BAMEG_5217	COG1252	NADH dehydrogenase
BAMEG_5220	COG3708	Transcriptional regulator
BAMEG_5223	COG1683	Conserved Protein
BAMEG_5227	COG0316	Belongs to the HesB IscA family
BAMEG_5230	COG1252	NADH dehydrogenase
BAMEG_5233	COG0390	transport system, permease component
BAMEG_5234	COG2824	Alkylphosphonate utilization operon protein PhnA
BAMEG_5242	COG4837	Protein of unknown function (DUF1462)
BAMEG_5243	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
BAMEG_5245	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
BAMEG_5246	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
BAMEG_5248	COG2249	NAD(P)H dehydrogenase (quinone) activity
BAMEG_5249	COG0647	UMP catabolic process
BAMEG_5251	COG2445	Protein of unknown function DUF86
BAMEG_5252	COG1494	fructose-1,6-bisphosphatase
BAMEG_5255	COG4470	Protein conserved in bacteria
BAMEG_5257	COG0789	Transcriptional regulator
BAMEG_5258	COG4377	Putative membrane peptidase family (DUF2324)
BAMEG_5263	COG0739	heme binding
BAMEG_5265	COG3377	Domain of unknown function (DUF1805)
BAMEG_5268	COG1695	Transcriptional regulator
BAMEG_5270	COG0719	Fe-S assembly protein
BAMEG_5271	COG0822	iron-sulfur transferase activity
BAMEG_5272	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BAMEG_5273	COG0719	Fe-S assembly protein
BAMEG_5274	COG0396	ATPase activity
BAMEG_5275	COG1464	Belongs to the NlpA lipoprotein family
BAMEG_5276	COG1464	Belongs to the NlpA lipoprotein family
BAMEG_5277	COG2011	ABC-type metal ion transport system permease component
BAMEG_5278	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BAMEG_5282	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BAMEG_5283	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
BAMEG_5285	COG1393	Belongs to the ArsC family
BAMEG_5294	COG0039	L-malate dehydrogenase activity
BAMEG_5298	COG1309	transcriptional regulator
BAMEG_5299	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BAMEG_5300	COG1960	acyl-CoA dehydrogenase activity
BAMEG_5302	COG0183	Belongs to the thiolase family
BAMEG_5303	COG1024	Enoyl-CoA hydratase
BAMEG_5303	COG1250	3-hydroxyacyl-CoA dehydrogenase
BAMEG_5305	COG1686	Belongs to the peptidase S11 family
BAMEG_5308	COG0011	TIGRFAM Protein of
BAMEG_5309	COG0840	transmembrane signaling receptor activity
BAMEG_5313	COG2814	Major facilitator Superfamily
BAMEG_5314	COG0531	amino acid
BAMEG_5316	COG0706	membrane insertase activity
BAMEG_5318	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BAMEG_5325	COG0586	Pfam SNARE associated Golgi protein
BAMEG_5327	COG1376	ErfK ybiS ycfS ynhG family protein
BAMEG_5328	COG0745	RESPONSE REGULATOR receiver
BAMEG_5329	COG5002	protein histidine kinase activity
BAMEG_5331	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BAMEG_5334	COG2151	metal-sulfur cluster biosynthetic enzyme
BAMEG_5335	COG3227	Zinc metalloprotease (Elastase)
BAMEG_5336	COG1741	Belongs to the pirin family
BAMEG_5339	COG0475	glutathione-regulated potassium exporter activity
BAMEG_5340	COG0490	domain, Protein
BAMEG_5341	COG1115	amino acid carrier protein
BAMEG_5342	COG0783	Belongs to the Dps family
BAMEG_5346	COG1611	Belongs to the LOG family
BAMEG_5349	COG2311	Membrane
BAMEG_5351	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BAMEG_5352	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BAMEG_5353	COG1115	amino acid carrier protein
BAMEG_5354	COG1115	amino acid carrier protein
BAMEG_5355	COG2910	NAD(P)H-binding
BAMEG_5360	COG0656	L-ascorbic acid biosynthetic process
BAMEG_5361	COG2814	Major facilitator Superfamily
BAMEG_5362	COG1733	regulation of RNA biosynthetic process
BAMEG_5364	COG1252	NADH dehydrogenase
BAMEG_5365	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
BAMEG_5366	COG0812	UDP-N-acetylmuramate dehydrogenase activity
BAMEG_5368	COG0840	transmembrane signaling receptor activity
BAMEG_5368	COG3290	protein histidine kinase activity
BAMEG_5370	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BAMEG_5371	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BAMEG_5374	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BAMEG_5375	COG3223	Belongs to the PsiE family
BAMEG_5388	COG0557	exoribonuclease II activity
BAMEG_5389	COG1647	Serine aminopeptidase, S33
BAMEG_5390	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BAMEG_5391	COG1346	cytolysis
BAMEG_5411	COG4695	Portal protein
BAMEG_5416	COG4974	Belongs to the 'phage' integrase family
BAMEG_5418	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
BAMEG_5419	COG0149	triose-phosphate isomerase activity
BAMEG_5421	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BAMEG_5424	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
BAMEG_5429	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BAMEG_5432	COG2323	membrane
BAMEG_5433	COG0740	serine-type endopeptidase activity
BAMEG_5434	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BAMEG_5436	COG0391	Required for morphogenesis under gluconeogenic growth conditions
BAMEG_5438	COG1051	belongs to the nudix hydrolase family
BAMEG_5440	COG0492	ferredoxin-NADP+ reductase activity
BAMEG_5441	COG0457	Tetratricopeptide repeat
BAMEG_5442	COG0110	maltose O-acetyltransferase activity
BAMEG_5446	COG1950	PFAM Membrane protein of
BAMEG_5448	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
BAMEG_5449	COG0556	nucleotide-excision repair
BAMEG_5453	COG0789	Transcriptional regulator
BAMEG_5458	COG2855	membrane
BAMEG_5459	COG0583	DNA-binding transcription factor activity
BAMEG_5461	COG0655	NAD(P)H dehydrogenase (quinone) activity
BAMEG_5464	COG1132	(ABC) transporter
BAMEG_5465	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BAMEG_5466	COG3409	Peptidoglycan-binding domain 1 protein
BAMEG_5466	COG0793	Belongs to the peptidase S41A family
BAMEG_5467	COG2177	Part of the ABC transporter FtsEX involved in
BAMEG_5468	COG2884	Cell division ATP-binding protein ftsE
BAMEG_5472	COG0653	protein targeting
BAMEG_5473	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BAMEG_5475	COG1278	Cold shock
BAMEG_5476	COG1040	competence protein
BAMEG_5477	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
BAMEG_5478	COG1388	LysM domain
BAMEG_5478	COG0791	NLP P60 protein
BAMEG_5479	COG1733	regulation of RNA biosynthetic process
BAMEG_5480	COG1307	EDD domain protein, DegV family
BAMEG_5481	COG1739	Uncharacterized protein family UPF0029
BAMEG_5482	COG1316	TRANSCRIPTIONal
BAMEG_5483	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
BAMEG_5484	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
BAMEG_5485	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BAMEG_5487	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
BAMEG_5487	COG3933	PFAM sigma-54 factor interaction domain-containing protein
BAMEG_5490	COG3394	polysaccharide catabolic process
BAMEG_5491	COG1486	melibiose metabolic process
BAMEG_5492	COG1447	Phosphotransferase system cellobiose-specific component IIA
BAMEG_5493	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BAMEG_5495	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
BAMEG_5496	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
BAMEG_5497	COG1447	Phosphotransferase system cellobiose-specific component IIA
BAMEG_5499	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BAMEG_5500	COG1301	dicarboxylic acid transport
BAMEG_5502	COG0346	lactoylglutathione lyase activity
BAMEG_5503	COG1511	domain protein
BAMEG_5504	COG0583	DNA-binding transcription factor activity
BAMEG_5505	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
BAMEG_5508	COG1271	oxidase subunit
BAMEG_5509	COG1294	oxidase, subunit
BAMEG_5510	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
BAMEG_5513	COG1620	l-lactate permease
BAMEG_5515	COG2389	metal-binding protein
BAMEG_5517	COG1368	sulfuric ester hydrolase activity
BAMEG_5522	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BAMEG_5524	COG1215	transferase activity, transferring glycosyl groups
BAMEG_5526	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BAMEG_5527	COG3584	3D domain protein
BAMEG_5527	COG1388	LysM domain
BAMEG_5532	COG4715	Zinc finger, swim domain protein
BAMEG_5533	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
BAMEG_5539	COG1191	sigma factor activity
BAMEG_5541	COG0577	efflux transmembrane transporter activity
BAMEG_5542	COG1136	(ABC) transporter
BAMEG_5549	COG5002	protein histidine kinase activity
BAMEG_5550	COG0745	RESPONSE REGULATOR receiver
BAMEG_5551	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
BAMEG_5555	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
BAMEG_5556	COG1134	teichoic acid transport
BAMEG_5557	COG1682	transport, permease protein
BAMEG_5558	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
BAMEG_5567	COG1609	Transcriptional regulator
BAMEG_5570	COG0739	heme binding
BAMEG_5573	COG3279	Response regulator of the LytR AlgR family
BAMEG_5574	COG4555	ABC transporter
BAMEG_5575	COG2385	sporulation resulting in formation of a cellular spore
BAMEG_5576	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BAMEG_5578	COG4836	Membrane
BAMEG_5579	COG1007	ATP synthesis coupled electron transport
BAMEG_5580	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BAMEG_5581	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BAMEG_5583	COG0839	Belongs to the complex I subunit 6 family
BAMEG_5586	COG0649	NAD binding
BAMEG_5587	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BAMEG_5589	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BAMEG_5590	COG5001	Diguanylate cyclase
BAMEG_5590	COG3300	MHYT domain
BAMEG_5600	COG0356	it plays a direct role in the translocation of protons across the membrane
BAMEG_5607	COG0698	ribose 5-phosphate isomerase
BAMEG_5609	COG2190	(PTS) system
BAMEG_5610	COG2259	Doxx family
BAMEG_5611	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BAMEG_5614	COG0009	L-threonylcarbamoyladenylate synthase
BAMEG_5617	COG2890	protein-(glutamine-N5) methyltransferase activity
BAMEG_5618	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
BAMEG_5621	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
BAMEG_5622	COG1494	fructose-1,6-bisphosphatase
BAMEG_5623	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BAMEG_5626	COG4821	SIS domain
BAMEG_5628	COG3343	RNA polymerase activity
BAMEG_5630	COG1960	acyl-CoA dehydrogenase activity
BAMEG_5631	COG1960	acyl-CoA dehydrogenase activity
BAMEG_5632	COG1250	3-hydroxyacyl-CoA dehydrogenase
BAMEG_5633	COG0183	Belongs to the thiolase family
BAMEG_5634	COG2181	nitrate reductase activity
BAMEG_5634	COG0247	lactate metabolic process
BAMEG_5635	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BAMEG_5637	COG3300	MHYT domain
BAMEG_5637	COG5001	Diguanylate cyclase
BAMEG_5641	COG2197	response regulator
BAMEG_5642	COG4585	Histidine kinase
BAMEG_5643	COG0842	Transport permease protein
BAMEG_5644	COG1131	(ABC) transporter
BAMEG_5645	COG0024	Methionine aminopeptidase
BAMEG_5650	COG2234	aminopeptidase activity
BAMEG_5654	COG1595	DNA-templated transcription, initiation
BAMEG_5655	COG0018	arginyl-trna synthetase
BAMEG_5656	COG4506	Protein conserved in bacteria
BAMEG_5657	COG1619	proteins homologs of microcin C7 resistance protein MccF
BAMEG_5661	COG0010	Belongs to the arginase family
BAMEG_5662	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
BAMEG_5663	COG2814	Major facilitator Superfamily
BAMEG_5664	COG0789	Transcriptional regulator
BAMEG_5666	COG0584	glycerophosphoryl diester phosphodiesterase
BAMEG_5667	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BAMEG_5669	COG1994	Peptidase M50
BAMEG_5671	COG1078	dGTPase activity
BAMEG_5672	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BAMEG_5673	COG1120	ATPase activity
BAMEG_5674	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAMEG_5675	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAMEG_5676	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAMEG_5680	COG0095	Lipoate-protein ligase
BAMEG_5681	COG0280	phosphate acetyltransferase
BAMEG_5684	COG3773	Cell wall hydrolase
BAMEG_5686	COG2363	Small membrane protein
BAMEG_5688	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
BAMEG_5689	COG2233	PERMEase
BAMEG_5690	COG0561	phosphatase activity
BAMEG_5691	COG2814	Major facilitator Superfamily
BAMEG_5693	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
BAMEG_5694	COG1131	(ABC) transporter
BAMEG_5695	COG2755	lipolytic protein G-D-S-L family
BAMEG_5696	COG1609	Transcriptional regulator
BAMEG_5698	COG0460	homoserine dehydrogenase
BAMEG_5703	COG1011	Hydrolase
BAMEG_5704	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BAMEG_5706	COG2197	response regulator
BAMEG_5707	COG2203	Gaf domain
BAMEG_5707	COG4585	Histidine kinase
BAMEG_5708	COG4585	Histidine kinase
BAMEG_5708	COG2203	Gaf domain
BAMEG_5709	COG0351	phosphomethylpyrimidine kinase
BAMEG_5710	COG3706	GGDEF domain
BAMEG_5711	COG2879	small protein
BAMEG_5712	COG1966	Carbon starvation protein
BAMEG_5713	COG3279	Response regulator of the LytR AlgR family
BAMEG_5714	COG0477	Major facilitator Superfamily
BAMEG_5720	COG0840	transmembrane signaling receptor activity
BAMEG_5722	COG1607	acyl-coa hydrolase
BAMEG_5725	COG0488	(ABC) transporter
BAMEG_5730	COG0463	Glycosyl transferase, family 2
BAMEG_5731	COG1309	transcriptional regulator
BAMEG_5732	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BAMEG_5733	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BAMEG_5733	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BAMEG_5735	COG0628	permease
BAMEG_5738	COG3279	Response regulator of the LytR AlgR family
BAMEG_5739	COG3275	phosphorelay sensor kinase activity
BAMEG_5741	COG2814	Major facilitator Superfamily
BAMEG_5742	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BAMEG_5743	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
BAMEG_5744	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
BAMEG_5748	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
BAMEG_5749	COG1272	protein, Hemolysin III
BAMEG_5753	COG0516	GMP reductase activity
BAMEG_5754	COG1164	Oligoendopeptidase f
BAMEG_5758	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BAMEG_5759	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
BAMEG_5760	COG4853	Protein conserved in bacteria
BAMEG_5761	COG4863	YycH protein
BAMEG_5762	COG5002	protein histidine kinase activity
BAMEG_5763	COG0745	RESPONSE REGULATOR receiver
BAMEG_5769	COG0305	Participates in initiation and elongation during chromosome replication
BAMEG_5771	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
BAMEG_5772	COG4241	membrane
BAMEG_5774	COG0629	single-stranded DNA binding
BAMEG_5776	COG0012	GTP binding
BAMEG_5777	COG4481	Protein conserved in bacteria
BAMEG_5778	COG0668	transmembrane transport
BAMEG_5780	COG1475	DNA binding
BAMEG_5781	COG1192	Involved in chromosome partitioning
BAMEG_5785	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
BAMEG_5786	COG1847	R3H domain protein
BAMEG_5787	COG0706	membrane insertase activity
BAMEG_A0013	COG3344	reverse transcriptase
BAMEG_A0034	COG3344	reverse transcriptase
BAMEG_A0080	COG4962	Type ii secretion system protein e
BAMEG_A0110	COG2311	Membrane
BAMEG_A0116	COG4196	transglutaminase domain protein
BAMEG_A0117	COG0671	phosphoesterase, PA-phosphatase related
BAMEG_A0122	COG1210	Utp--glucose-1-phosphate uridylyltransferase
BAMEG_A0123	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
BAMEG_A0126	COG2801	Transposase and inactivated derivatives
BAMEG_A0127	COG2801	Transposase and inactivated derivatives
BAMEG_A0172	COG2002	toxin-antitoxin pair type II binding
BAMEG_A0174	COG4974	Belongs to the 'phage' integrase family
BAMEG_A0184	COG2801	Transposase and inactivated derivatives
BAMEG_A0187	COG2801	Transposase and inactivated derivatives
BAMEG_A0188	COG2801	Transposase and inactivated derivatives
BAMEG_A0190	COG3443	Belongs to the bacterial solute-binding protein 9 family
BAMEG_A0192	COG4974	Belongs to the 'phage' integrase family
BAMEG_A0197	COG0457	Tetratricopeptide repeat
BAMEG_A0199	COG1923	regulation of RNA biosynthetic process
BAMEG_B0004	COG0741	lytic transglycosylase activity
BAMEG_B0004	COG0791	NLP P60 protein
BAMEG_B0042	COG1192	Involved in chromosome partitioning
BAMEG_B0049	COG2801	Transposase and inactivated derivatives
BAMEG_B0055	COG1683	Conserved Protein
BAMEG_B0057	COG1309	transcriptional regulator
BAMEG_B0077	COG0681	Belongs to the peptidase S26 family
BAMEG_B0084	COG1280	lysine exporter protein (LysE YggA)
BAMEG_B0092	COG4166	transmembrane transport
BAMEG_B0096	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BAMEG_B0107	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BAMEG_B0108	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone