locus-tag	class	description
BAPAT_0002	COG0592	DNA-directed DNA polymerase activity
BAPAT_0003	COG2501	S4 domain
BAPAT_0005	COG0187	DNA topoisomerase II activity
BAPAT_0006	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BAPAT_0009	COG0516	GMP reductase activity
BAPAT_0009	COG0517	IMP dehydrogenase activity
BAPAT_0010	COG1686	Belongs to the peptidase S11 family
BAPAT_0015	COG1428	Deoxynucleoside kinase
BAPAT_0016	COG1428	Deoxynucleoside kinase
BAPAT_0017	COG1335	isochorismatase
BAPAT_0018	COG0590	tRNA wobble adenosine to inosine editing
BAPAT_0019	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
BAPAT_0026	COG1982	Orn Lys Arg decarboxylase major
BAPAT_0028	COG0470	DNA polymerase III
BAPAT_0029	COG1774	PSP1 C-terminal conserved region
BAPAT_0031	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
BAPAT_0033	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
BAPAT_0034	COG2002	toxin-antitoxin pair type II binding
BAPAT_0035	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BAPAT_0035	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BAPAT_0036	COG0084	hydrolase, TatD family'
BAPAT_0040	COG4466	Protein conserved in bacteria
BAPAT_0043	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
BAPAT_0044	COG0251	oxidation-reduction process
BAPAT_0047	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BAPAT_0048	COG0193	aminoacyl-tRNA hydrolase activity
BAPAT_0050	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
BAPAT_0051	COG2002	toxin-antitoxin pair type II binding
BAPAT_0052	COG2244	polysaccharide biosynthetic process
BAPAT_0053	COG3956	TIGRFAM MazG family protein
BAPAT_0054	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
BAPAT_0058	COG1098	S1 RNA binding domain
BAPAT_0059	COG2208	phosphoserine phosphatase activity
BAPAT_0060	COG0037	tRNA processing
BAPAT_0062	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BAPAT_0065	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
BAPAT_0066	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
BAPAT_0067	COG0512	Glutamine amidotransferase of anthranilate synthase
BAPAT_0068	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BAPAT_0069	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
BAPAT_0070	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
BAPAT_0071	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
BAPAT_0072	COG1396	sequence-specific DNA binding
BAPAT_0073	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BAPAT_0077	COG3880	PFAM UvrB UvrC protein
BAPAT_0079	COG0542	response to heat
BAPAT_0080	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
BAPAT_0082	COG4956	integral membrane protein (PIN domain superfamily)
BAPAT_0086	COG1045	serine acetyltransferase
BAPAT_0089	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BAPAT_0090	COG3688	RNA-binding protein containing a PIN domain
BAPAT_0092	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BAPAT_0093	COG0250	Participates in transcription elongation, termination and antitermination
BAPAT_0098	COG2813	Specifically methylates the guanine in position
BAPAT_0100	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BAPAT_0101	COG1358	cellular component organization or biogenesis
BAPAT_0122	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
BAPAT_0127	COG0201	protein transport
BAPAT_0129	COG0024	Methionine aminopeptidase
BAPAT_0131	COG0257	Belongs to the bacterial ribosomal protein bL36 family
BAPAT_0137	COG1122	ATPase activity
BAPAT_0138	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BAPAT_0139	COG0101	tRNA pseudouridine synthase activity
BAPAT_0143	COG0860	N-Acetylmuramoyl-L-alanine amidase
BAPAT_0144	COG0489	protein tyrosine kinase activity
BAPAT_0146	COG2194	sulfuric ester hydrolase activity
BAPAT_0147	COG0726	polysaccharide deacetylase
BAPAT_0153	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
BAPAT_0154	COG4856	YbbR-like protein
BAPAT_0156	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
BAPAT_0157	COG0596	Alpha beta hydrolase
BAPAT_0161	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
BAPAT_0162	COG4946	Tricorn protease homolog
BAPAT_0162	COG0823	Involved in the tonB-independent uptake of proteins
BAPAT_0162	COG1506	peptidase
BAPAT_0169	COG1028	Short-chain dehydrogenase reductase Sdr
BAPAT_0170	COG2011	ABC-type metal ion transport system permease component
BAPAT_0171	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BAPAT_0172	COG1464	Belongs to the NlpA lipoprotein family
BAPAT_0177	COG2271	Major facilitator Superfamily
BAPAT_0179	COG2814	Major facilitator Superfamily
BAPAT_0182	COG0601	transmembrane transport
BAPAT_0183	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BAPAT_0184	COG0444	Belongs to the ABC transporter superfamily
BAPAT_0185	COG4608	Belongs to the ABC transporter superfamily
BAPAT_0186	COG4166	transmembrane transport
BAPAT_0188	COG2207	Transcriptional regulator
BAPAT_0191	COG4166	transmembrane transport
BAPAT_0192	COG4166	transmembrane transport
BAPAT_0193	COG0656	L-ascorbic acid biosynthetic process
BAPAT_0194	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BAPAT_0197	COG4149	molybdate abc transporter
BAPAT_0198	COG0725	ABC transporter, periplasmic molybdate-binding protein
BAPAT_0199	COG1910	domain protein
BAPAT_0200	COG0583	DNA-binding transcription factor activity
BAPAT_0201	COG0697	spore germination
BAPAT_0203	COG0204	Acyl-transferase
BAPAT_0204	COG1609	Transcriptional regulator
BAPAT_0205	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BAPAT_0208	COG0084	hydrolase, TatD family'
BAPAT_0209	COG5298	Protein conserved in bacteria
BAPAT_0214	COG0488	(ABC) transporter
BAPAT_0217	COG0747	negative chemotaxis
BAPAT_0218	COG0601	transmembrane transport
BAPAT_0220	COG0444	Belongs to the ABC transporter superfamily
BAPAT_0221	COG4608	Belongs to the ABC transporter superfamily
BAPAT_0222	COG0561	phosphatase activity
BAPAT_0223	COG0561	phosphatase activity
BAPAT_0227	COG3185	4-Hydroxyphenylpyruvate dioxygenase
BAPAT_0228	COG0179	Fumarylacetoacetate (FAA) hydrolase
BAPAT_0230	COG2814	Major facilitator Superfamily
BAPAT_0233	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
BAPAT_0235	COG4294	response to UV
BAPAT_0236	COG0457	Tetratricopeptide repeat
BAPAT_0236	COG0705	Rhomboid family
BAPAT_0238	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
BAPAT_0239	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BAPAT_0240	COG0864	Transcriptional regulator
BAPAT_0241	COG2337	Toxic component of a toxin-antitoxin (TA) module
BAPAT_0242	COG2183	response to ionizing radiation
BAPAT_0245	COG0802	atpase or kinase
BAPAT_0246	COG1214	PFAM Peptidase M22, glycoprotease
BAPAT_0247	COG0456	acetyltransferase
BAPAT_0248	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
BAPAT_0249	COG0488	(ABC) transporter
BAPAT_0251	COG1266	CAAX protease self-immunity
BAPAT_0255	COG2252	PERMEase
BAPAT_0257	COG5002	protein histidine kinase activity
BAPAT_0259	COG1968	undecaprenyl-diphosphatase activity
BAPAT_0262	COG2205	protein histidine kinase activity
BAPAT_0263	COG0745	RESPONSE REGULATOR receiver
BAPAT_0266	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
BAPAT_0267	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
BAPAT_0268	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
BAPAT_0270	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BAPAT_0273	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
BAPAT_0275	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
BAPAT_0277	COG0151	Belongs to the GarS family
BAPAT_0282	COG0210	DNA helicase
BAPAT_0284	COG4851	CamS sex pheromone cAM373 precursor
BAPAT_0288	COG1335	isochorismatase
BAPAT_0289	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BAPAT_0290	COG2011	ABC-type metal ion transport system permease component
BAPAT_0291	COG1464	Belongs to the NlpA lipoprotein family
BAPAT_0293	COG0003	Pfam Anion-transporting ATPase
BAPAT_0294	COG0003	Pfam Anion-transporting ATPase
BAPAT_0295	COG1846	Transcriptional regulator
BAPAT_0296	COG4682	membrane
BAPAT_0300	COG1597	lipid kinase activity
BAPAT_0301	COG0546	phosphoglycolate phosphatase activity
BAPAT_0302	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BAPAT_0304	COG1012	belongs to the aldehyde dehydrogenase family
BAPAT_0305	COG2076	Multidrug Resistance protein
BAPAT_0306	COG2309	aminopeptidase activity
BAPAT_0309	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BAPAT_0310	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BAPAT_0311	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BAPAT_0313	COG4807	Protein conserved in bacteria
BAPAT_0319	COG1473	amidohydrolase
BAPAT_0322	COG0450	alkyl hydroperoxide reductase
BAPAT_0323	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
BAPAT_0325	COG0235	Class ii aldolase
BAPAT_0326	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAPAT_0327	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAPAT_0328	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BAPAT_0331	COG0166	Belongs to the GPI family
BAPAT_0337	COG5002	protein histidine kinase activity
BAPAT_0341	COG3541	Predicted nucleotidyltransferase
BAPAT_0342	COG2814	Major facilitator Superfamily
BAPAT_0343	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BAPAT_0343	COG0723	plastoquinol--plastocyanin reductase activity
BAPAT_0345	COG0765	amino acid transport
BAPAT_0346	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BAPAT_0348	COG0840	transmembrane signaling receptor activity
BAPAT_0349	COG0840	transmembrane signaling receptor activity
BAPAT_0350	COG0366	Alpha amylase catalytic
BAPAT_0351	COG1263	PTS System
BAPAT_0351	COG2190	(PTS) system
BAPAT_0351	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BAPAT_0358	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
BAPAT_0361	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BAPAT_0363	COG1116	anion transmembrane transporter activity
BAPAT_0364	COG0488	(ABC) transporter
BAPAT_0374	COG2270	Major facilitator Superfamily
BAPAT_0377	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
BAPAT_0380	COG2310	stress, protein
BAPAT_0381	COG2310	stress, protein
BAPAT_0382	COG2310	stress, protein
BAPAT_0383	COG0861	Integral membrane protein TerC family
BAPAT_0385	COG3853	Toxic anion resistance protein (TelA)
BAPAT_0388	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BAPAT_0390	COG1295	ribonuclease BN
BAPAT_0391	COG2217	Heavy metal translocating P-type atpase
BAPAT_0392	COG0697	spore germination
BAPAT_0394	COG0681	Belongs to the peptidase S26 family
BAPAT_0397	COG0586	Pfam SNARE associated Golgi protein
BAPAT_0400	COG3871	stress protein (general stress protein 26)
BAPAT_0401	COG0387	Pfam Sodium calcium exchanger
BAPAT_0403	COG0535	radical SAM domain protein
BAPAT_0408	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
BAPAT_0409	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BAPAT_0410	COG0582	viral genome integration into host DNA
BAPAT_0415	COG1396	sequence-specific DNA binding
BAPAT_0421	COG1484	DNA-dependent DNA replication
BAPAT_0438	COG0582	viral genome integration into host DNA
BAPAT_0464	COG0101	tRNA pseudouridine synthase activity
BAPAT_0466	COG3829	transcription factor binding
BAPAT_0468	COG0833	amino acid
BAPAT_0469	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BAPAT_0474	COG2066	Belongs to the glutaminase family
BAPAT_0476	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BAPAT_0476	COG1263	PTS System
BAPAT_0477	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BAPAT_0480	COG0463	Glycosyl transferase, family 2
BAPAT_0483	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BAPAT_0483	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
BAPAT_0486	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BAPAT_0490	COG1228	amidohydrolase
BAPAT_0491	COG1090	epimerase
BAPAT_0497	COG1988	membrane-bound metal-dependent
BAPAT_0498	COG1194	a g-specific adenine glycosylase
BAPAT_0504	COG1132	(ABC) transporter
BAPAT_0505	COG4129	membrane
BAPAT_0506	COG0069	glutamate synthase activity
BAPAT_0506	COG0067	glutamate synthase
BAPAT_0506	COG0070	glutamate synthase
BAPAT_0508	COG4555	ABC transporter
BAPAT_0512	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
BAPAT_0513	COG0735	belongs to the Fur family
BAPAT_0520	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
BAPAT_0521	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
BAPAT_0522	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
BAPAT_0524	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
BAPAT_0526	COG2766	serine protein kinase
BAPAT_0531	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BAPAT_0533	COG1585	Membrane protein implicated in regulation of membrane protease activity
BAPAT_0534	COG2268	Band 7 protein
BAPAT_0536	COG3290	protein histidine kinase activity
BAPAT_0537	COG4565	transcriptional regulatory protein
BAPAT_0538	COG2851	Citrate transporter
BAPAT_0542	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
BAPAT_0543	COG3842	ATPase activity
BAPAT_0544	COG1175	transmembrane transport
BAPAT_0545	COG0395	ABC-type sugar transport system, permease component
BAPAT_0548	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
BAPAT_0549	COG0745	RESPONSE REGULATOR receiver
BAPAT_0550	COG5002	protein histidine kinase activity
BAPAT_0552	COG4990	cell redox homeostasis
BAPAT_0554	COG3290	protein histidine kinase activity
BAPAT_0555	COG4565	transcriptional regulatory protein
BAPAT_0556	COG3493	citrate carrier protein
BAPAT_0557	COG0281	malic enzyme
BAPAT_0560	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BAPAT_0562	COG5002	protein histidine kinase activity
BAPAT_0563	COG0745	RESPONSE REGULATOR receiver
BAPAT_0565	COG0454	-acetyltransferase
BAPAT_0565	COG0456	acetyltransferase
BAPAT_0566	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
BAPAT_0567	COG3383	formate dehydrogenase (NAD+) activity
BAPAT_0569	COG2427	Protein of unknown function (DUF1641)
BAPAT_0572	COG0531	amino acid
BAPAT_0573	COG0640	Transcriptional regulator
BAPAT_0574	COG2217	Heavy metal translocating P-type atpase
BAPAT_0575	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
BAPAT_0578	COG3227	Zinc metalloprotease (Elastase)
BAPAT_0582	COG2720	vancomycin resistance protein
BAPAT_0583	COG1316	TRANSCRIPTIONal
BAPAT_0584	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BAPAT_0585	COG0346	lactoylglutathione lyase activity
BAPAT_0586	COG1253	flavin adenine dinucleotide binding
BAPAT_0587	COG1027	Aspartate ammonia-lyase
BAPAT_0588	COG1620	l-lactate permease
BAPAT_0591	COG3104	oligopeptide transport
BAPAT_0592	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BAPAT_0593	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAPAT_0594	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAPAT_0596	COG2226	methyltransferase
BAPAT_0597	COG0156	8-amino-7-oxononanoate synthase activity
BAPAT_0598	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BAPAT_0600	COG4548	von Willebrand factor, type A
BAPAT_0601	COG0714	Associated with various cellular activities
BAPAT_0602	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BAPAT_0606	COG0531	amino acid
BAPAT_0607	COG2188	Transcriptional regulator
BAPAT_0608	COG1263	PTS System
BAPAT_0608	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BAPAT_0609	COG0366	Alpha amylase catalytic
BAPAT_0612	COG0697	spore germination
BAPAT_0614	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
BAPAT_0615	COG1115	amino acid carrier protein
BAPAT_0616	COG1126	abc transporter atp-binding protein
BAPAT_0617	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BAPAT_0618	COG0765	amino acid transport
BAPAT_0619	COG0765	amino acid transport
BAPAT_0620	COG0833	amino acid
BAPAT_0625	COG2378	regulation of single-species biofilm formation
BAPAT_0626	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
BAPAT_0627	COG5002	protein histidine kinase activity
BAPAT_0630	COG0659	secondary active sulfate transmembrane transporter activity
BAPAT_0633	COG0747	negative chemotaxis
BAPAT_0635	COG0601	transmembrane transport
BAPAT_0636	COG4608	Belongs to the ABC transporter superfamily
BAPAT_0638	COG2271	Major facilitator Superfamily
BAPAT_0639	COG1846	Transcriptional regulator
BAPAT_0640	COG0477	Major facilitator Superfamily
BAPAT_0641	COG0477	Major facilitator Superfamily
BAPAT_0642	COG1609	Transcriptional regulator
BAPAT_0643	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BAPAT_0645	COG1129	ABC transporter
BAPAT_0646	COG1172	Belongs to the binding-protein-dependent transport system permease family
BAPAT_0647	COG1879	ABC-type sugar transport system periplasmic component
BAPAT_0648	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
BAPAT_0652	COG1063	alcohol dehydrogenase
BAPAT_0655	COG3568	Endonuclease Exonuclease Phosphatase
BAPAT_0660	COG1968	undecaprenyl-diphosphatase activity
BAPAT_0661	COG0840	transmembrane signaling receptor activity
BAPAT_0662	COG3584	3D domain protein
BAPAT_0662	COG1388	LysM domain
BAPAT_0663	COG1476	TRANSCRIPTIONal
BAPAT_0666	COG3104	oligopeptide transport
BAPAT_0667	COG1114	Component of the transport system for branched-chain amino acids
BAPAT_0670	COG1113	amino acid transport
BAPAT_0671	COG2252	PERMEase
BAPAT_0676	COG0475	glutathione-regulated potassium exporter activity
BAPAT_0676	COG0569	domain protein
BAPAT_0679	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BAPAT_0680	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
BAPAT_0681	COG4990	cell redox homeostasis
BAPAT_0684	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BAPAT_0685	COG0697	spore germination
BAPAT_0686	COG0531	amino acid
BAPAT_0688	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
BAPAT_0689	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
BAPAT_0690	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
BAPAT_0690	COG1918	ferrous iron import across plasma membrane
BAPAT_0691	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
BAPAT_0692	COG0573	inorganic phosphate transmembrane transporter activity
BAPAT_0693	COG0581	inorganic phosphate transmembrane transporter activity
BAPAT_0695	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BAPAT_0697	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
BAPAT_0701	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
BAPAT_0702	COG1116	anion transmembrane transporter activity
BAPAT_0703	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BAPAT_0704	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BAPAT_0705	COG0352	thiamine-phosphate diphosphorylase activity
BAPAT_0706	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BAPAT_0707	COG2104	thiamine diphosphate biosynthetic process
BAPAT_0709	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BAPAT_0710	COG0351	phosphomethylpyrimidine kinase
BAPAT_0716	COG2205	protein histidine kinase activity
BAPAT_0717	COG2814	Major facilitator Superfamily
BAPAT_0718	COG1846	Transcriptional regulator
BAPAT_0721	COG2252	PERMEase
BAPAT_0722	COG1028	Short-chain dehydrogenase reductase Sdr
BAPAT_0723	COG1376	ErfK ybiS ycfS ynhG family protein
BAPAT_0724	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BAPAT_0725	COG1621	beta-fructofuranosidase activity
BAPAT_0726	COG1263	PTS System
BAPAT_0726	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BAPAT_0727	COG1609	Transcriptional regulator
BAPAT_0729	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BAPAT_0730	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
BAPAT_0738	COG0778	Nitroreductase
BAPAT_0739	COG2719	SpoVR family
BAPAT_0744	COG0446	pyridine nucleotide-disulphide oxidoreductase
BAPAT_0745	COG1937	Protein conserved in bacteria
BAPAT_0746	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BAPAT_0746	COG0425	Belongs to the sulfur carrier protein TusA family
BAPAT_0747	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BAPAT_0747	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BAPAT_0748	COG0425	Belongs to the sulfur carrier protein TusA family
BAPAT_0749	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BAPAT_0751	COG2210	Belongs to the sulfur carrier protein TusA family
BAPAT_0752	COG0730	response to heat
BAPAT_0754	COG1316	TRANSCRIPTIONal
BAPAT_0755	COG0604	alcohol dehydrogenase
BAPAT_0756	COG1283	sodium-dependent phosphate transmembrane transporter activity
BAPAT_0759	COG3711	transcriptional antiterminator
BAPAT_0759	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BAPAT_0760	COG1447	Phosphotransferase system cellobiose-specific component IIA
BAPAT_0761	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BAPAT_0765	COG1388	LysM domain
BAPAT_0765	COG3584	3D domain protein
BAPAT_0766	COG0577	efflux transmembrane transporter activity
BAPAT_0767	COG1136	(ABC) transporter
BAPAT_0769	COG5522	Integral membrane protein (intg_mem_TP0381)
BAPAT_0773	COG1114	Component of the transport system for branched-chain amino acids
BAPAT_0774	COG3546	catalase activity
BAPAT_0781	COG0586	Pfam SNARE associated Golgi protein
BAPAT_0788	COG0531	amino acid
BAPAT_0789	COG0475	glutathione-regulated potassium exporter activity
BAPAT_0791	COG1737	Transcriptional regulator
BAPAT_0793	COG1263	PTS System
BAPAT_0793	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BAPAT_0795	COG2259	Doxx family
BAPAT_0798	COG0697	spore germination
BAPAT_0799	COG1522	sequence-specific DNA binding
BAPAT_0801	COG2076	Multidrug Resistance protein
BAPAT_0802	COG2076	Multidrug Resistance protein
BAPAT_0803	COG1309	transcriptional regulator
BAPAT_0804	COG2814	Major facilitator Superfamily
BAPAT_0805	COG1733	regulation of RNA biosynthetic process
BAPAT_0807	COG2249	NAD(P)H dehydrogenase (quinone) activity
BAPAT_0808	COG4533	DNA binding
BAPAT_0809	COG2814	Major facilitator Superfamily
BAPAT_0812	COG0693	protein deglycase activity
BAPAT_0813	COG0693	protein deglycase activity
BAPAT_0813	COG0753	catalase activity
BAPAT_0815	COG0531	amino acid
BAPAT_0816	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
BAPAT_0818	COG1012	belongs to the aldehyde dehydrogenase family
BAPAT_0819	COG1132	(ABC) transporter
BAPAT_0820	COG1132	(ABC) transporter
BAPAT_0821	COG1132	(ABC) transporter
BAPAT_0822	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BAPAT_0823	COG0765	amino acid transport
BAPAT_0824	COG1126	abc transporter atp-binding protein
BAPAT_0827	COG0189	ligase activity
BAPAT_0833	COG0028	Belongs to the TPP enzyme family
BAPAT_0834	COG3527	Alpha-acetolactate decarboxylase
BAPAT_0837	COG0561	phosphatase activity
BAPAT_0839	COG3409	Peptidoglycan-binding domain 1 protein
BAPAT_0839	COG5632	N-Acetylmuramoyl-L-alanine amidase
BAPAT_0841	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BAPAT_0844	COG0659	secondary active sulfate transmembrane transporter activity
BAPAT_0848	COG0653	protein targeting
BAPAT_0849	COG2244	polysaccharide biosynthetic process
BAPAT_0851	COG0860	N-Acetylmuramoyl-L-alanine amidase
BAPAT_0852	COG4196	transglutaminase domain protein
BAPAT_0855	COG1696	Membrane protein involved in D-alanine export
BAPAT_0858	COG1024	Enoyl-CoA hydratase
BAPAT_0861	COG1363	Peptidase, m42
BAPAT_0865	COG3938	Belongs to the proline racemase family
BAPAT_0874	COG0601	transmembrane transport
BAPAT_0875	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BAPAT_0876	COG0444	Belongs to the ABC transporter superfamily
BAPAT_0877	COG0444	Belongs to the ABC transporter superfamily
BAPAT_0878	COG4608	Belongs to the ABC transporter superfamily
BAPAT_0884	COG0477	Major facilitator Superfamily
BAPAT_0885	COG3290	protein histidine kinase activity
BAPAT_0886	COG4565	transcriptional regulatory protein
BAPAT_0887	COG3181	Tripartite tricarboxylate transporter family receptor
BAPAT_0893	COG4978	Transcriptional regulator
BAPAT_0893	COG0789	Transcriptional regulator
BAPAT_0895	COG0305	Participates in initiation and elongation during chromosome replication
BAPAT_0902	COG0477	Major facilitator Superfamily
BAPAT_0917	COG1183	phosphatidylcholine synthase activity
BAPAT_0921	COG2376	Dihydroxyacetone kinase
BAPAT_0923	COG2376	Dihydroxyacetone kinase
BAPAT_0924	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
BAPAT_0925	COG1959	2 iron, 2 sulfur cluster binding
BAPAT_0931	COG3437	response regulator, receiver
BAPAT_0931	COG2770	Histidine kinase
BAPAT_0940	COG3237	CsbD-like
BAPAT_0945	COG1191	sigma factor activity
BAPAT_0947	COG2208	phosphoserine phosphatase activity
BAPAT_0948	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
BAPAT_0949	COG2198	Histidine kinase
BAPAT_0949	COG2205	protein histidine kinase activity
BAPAT_0949	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BAPAT_0949	COG0784	Response regulator, receiver
BAPAT_0954	COG0393	Putative heavy-metal-binding
BAPAT_0959	COG0420	3'-5' exonuclease activity
BAPAT_0960	COG4717	serine-type aminopeptidase activity
BAPAT_0964	COG1309	transcriptional regulator
BAPAT_0965	COG2814	Major facilitator Superfamily
BAPAT_0966	COG0346	lactoylglutathione lyase activity
BAPAT_0967	COG0346	lactoylglutathione lyase activity
BAPAT_0968	COG0457	Tetratricopeptide repeat
BAPAT_0970	COG2267	carboxylic ester hydrolase activity
BAPAT_0975	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
BAPAT_0976	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
BAPAT_0978	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
BAPAT_0985	COG0477	Major facilitator Superfamily
BAPAT_0986	COG0477	Major facilitator Superfamily
BAPAT_0988	COG3973	AAA domain
BAPAT_0989	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BAPAT_0993	COG4980	gas vesicle protein
BAPAT_0994	COG0537	adenosine 5'-monophosphoramidase activity
BAPAT_0995	COG1131	(ABC) transporter
BAPAT_0996	COG4473	ABC transporter
BAPAT_0999	COG1309	transcriptional regulator
BAPAT_1001	COG3402	PFAM membrane-flanked domain
BAPAT_1003	COG3428	Bacterial PH domain
BAPAT_1011	COG3402	PFAM membrane-flanked domain
BAPAT_1012	COG3428	Bacterial PH domain
BAPAT_1013	COG2329	Antibiotic biosynthesis monooxygenase
BAPAT_1014	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BAPAT_1015	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
BAPAT_1024	COG1309	transcriptional regulator
BAPAT_1025	COG1511	domain protein
BAPAT_1030	COG1609	Transcriptional regulator
BAPAT_1032	COG1234	tRNA 3'-trailer cleavage
BAPAT_1033	COG0095	Lipoate-protein ligase
BAPAT_1035	COG0318	PFAM AMP-dependent synthetase and ligase
BAPAT_1041	COG3209	COG3209 Rhs family protein
BAPAT_1052	COG1408	metallophosphoesterase
BAPAT_1053	COG1078	dGTPase activity
BAPAT_1055	COG1595	DNA-templated transcription, initiation
BAPAT_1056	COG3708	Transcriptional regulator
BAPAT_1056	COG2207	Transcriptional regulator
BAPAT_1058	COG2205	protein histidine kinase activity
BAPAT_1059	COG0745	RESPONSE REGULATOR receiver
BAPAT_1064	COG0501	Belongs to the peptidase M48B family
BAPAT_1065	COG0840	transmembrane signaling receptor activity
BAPAT_1066	COG0697	spore germination
BAPAT_1070	COG0497	DNA recombination
BAPAT_1071	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
BAPAT_1072	COG2224	Isocitrate lyase
BAPAT_1074	COG1278	Cold shock
BAPAT_1077	COG4903	ComK protein
BAPAT_1078	COG0398	Pfam SNARE associated Golgi protein
BAPAT_1080	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
BAPAT_1081	COG1074	ATP-dependent DNA helicase activity
BAPAT_1089	COG0179	Fumarylacetoacetate (FAA) hydrolase
BAPAT_1094	COG0367	asparagine synthase
BAPAT_1096	COG0753	catalase activity
BAPAT_1097	COG0004	ammonium transporteR
BAPAT_1101	COG2996	Protein conserved in bacteria
BAPAT_1103	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BAPAT_1105	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BAPAT_1108	COG0561	phosphatase activity
BAPAT_1111	COG0542	response to heat
BAPAT_1113	COG2267	carboxylic ester hydrolase activity
BAPAT_1116	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BAPAT_1117	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BAPAT_1118	COG5504	Zn-dependent protease
BAPAT_1120	COG0180	Tryptophanyl-tRNA synthetase
BAPAT_1122	COG4166	transmembrane transport
BAPAT_1123	COG0601	transmembrane transport
BAPAT_1124	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BAPAT_1125	COG0444	Belongs to the ABC transporter superfamily
BAPAT_1126	COG4608	Belongs to the ABC transporter superfamily
BAPAT_1127	COG0534	Mate efflux family protein
BAPAT_1128	COG4166	transmembrane transport
BAPAT_1131	COG1393	Belongs to the ArsC family
BAPAT_1132	COG0861	Integral membrane protein TerC family
BAPAT_1133	COG4862	establishment of competence for transformation
BAPAT_1134	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BAPAT_1136	COG1164	Oligoendopeptidase f
BAPAT_1139	COG2346	COG2346, Truncated hemoglobins
BAPAT_1140	COG4116	CYTH
BAPAT_1142	COG2357	RelA SpoT domain protein
BAPAT_1143	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
BAPAT_1144	COG0564	pseudouridine synthase activity
BAPAT_1147	COG0772	Belongs to the SEDS family
BAPAT_1148	COG0772	Belongs to the SEDS family
BAPAT_1149	COG1216	Glycosyl transferase, family 2
BAPAT_1153	COG0457	Tetratricopeptide repeat
BAPAT_1153	COG0463	Glycosyl transferase, family 2
BAPAT_1157	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
BAPAT_1160	COG1091	dTDP-4-dehydrorhamnose reductase activity
BAPAT_1169	COG2153	protein acetylation
BAPAT_1170	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
BAPAT_1171	COG2382	esterase
BAPAT_1174	COG5492	domain, Protein
BAPAT_1175	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BAPAT_1178	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
BAPAT_1178	COG0512	Glutamine amidotransferase of anthranilate synthase
BAPAT_1185	COG1620	l-lactate permease
BAPAT_1186	COG5634	Uncharacterized conserved protein (DUF2278)
BAPAT_1196	COG0508	dehydrogenase complex catalyzes the overall conversion of
BAPAT_1198	COG1476	TRANSCRIPTIONal
BAPAT_1207	COG2226	methyltransferase
BAPAT_1209	COG1686	Belongs to the peptidase S11 family
BAPAT_1210	COG0681	Belongs to the peptidase S26 family
BAPAT_1216	COG1012	belongs to the aldehyde dehydrogenase family
BAPAT_1217	COG3842	ATPase activity
BAPAT_1218	COG1176	ABC-type spermidine putrescine transport system, permease component I
BAPAT_1219	COG1177	transmembrane transport
BAPAT_1220	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
BAPAT_1222	COG2409	Drug exporters of the RND superfamily
BAPAT_1224	COG0564	pseudouridine synthase activity
BAPAT_1226	COG2340	Cysteine-rich secretory protein family
BAPAT_1227	COG0247	lactate metabolic process
BAPAT_1228	COG0277	FAD linked oxidase domain protein
BAPAT_1229	COG3835	regulator
BAPAT_1231	COG0745	RESPONSE REGULATOR receiver
BAPAT_1232	COG5002	protein histidine kinase activity
BAPAT_1233	COG2186	Transcriptional regulator
BAPAT_1237	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
BAPAT_1239	COG2116	formate transmembrane transporter activity
BAPAT_1240	COG0861	Integral membrane protein TerC family
BAPAT_1241	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BAPAT_1242	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BAPAT_1244	COG2030	dehydratase
BAPAT_1248	COG1028	Short-chain dehydrogenase reductase Sdr
BAPAT_1249	COG3243	poly(R)-hydroxyalkanoic acid synthase
BAPAT_1251	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BAPAT_1254	COG1840	ABC-type Fe3 transport system, periplasmic component
BAPAT_1255	COG3842	ATPase activity
BAPAT_1256	COG3842	ATPase activity
BAPAT_1258	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BAPAT_1262	COG1349	DNA-binding transcription factor activity
BAPAT_1267	COG0235	Class ii aldolase
BAPAT_1270	COG2861	carbohydrate metabolic process
BAPAT_1272	COG3852	Histidine kinase
BAPAT_1273	COG1846	Transcriptional regulator
BAPAT_1275	COG2318	DinB family
BAPAT_1277	COG5002	protein histidine kinase activity
BAPAT_1279	COG0720	synthase
BAPAT_1282	COG4873	Protein conserved in bacteria
BAPAT_1288	COG1780	Probably involved in ribonucleotide reductase function
BAPAT_1289	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BAPAT_1291	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BAPAT_1292	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BAPAT_1293	COG1725	Transcriptional regulator
BAPAT_1294	COG1131	(ABC) transporter
BAPAT_1296	COG1131	(ABC) transporter
BAPAT_1297	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
BAPAT_1300	COG1522	sequence-specific DNA binding
BAPAT_1302	COG1335	isochorismatase
BAPAT_1304	COG1619	proteins homologs of microcin C7 resistance protein MccF
BAPAT_1305	COG2070	2-Nitropropane dioxygenase
BAPAT_1306	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
BAPAT_1308	COG1696	Membrane protein involved in D-alanine export
BAPAT_1313	COG0716	FMN binding
BAPAT_1316	COG3173	Aminoglycoside phosphotransferase
BAPAT_1320	COG0534	Mate efflux family protein
BAPAT_1321	COG1968	undecaprenyl-diphosphatase activity
BAPAT_1324	COG1846	Transcriptional regulator
BAPAT_1326	COG1301	dicarboxylic acid transport
BAPAT_1327	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BAPAT_1328	COG4709	membrane
BAPAT_1329	COG3874	Sporulation protein YtfJ
BAPAT_1333	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BAPAT_1334	COG0028	Belongs to the TPP enzyme family
BAPAT_1335	COG0440	acetolactate synthase activity
BAPAT_1336	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
BAPAT_1338	COG0473	3-isopropylmalate dehydrogenase activity
BAPAT_1343	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
BAPAT_1350	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
BAPAT_1353	COG1183	phosphatidylcholine synthase activity
BAPAT_1354	COG1368	sulfuric ester hydrolase activity
BAPAT_1356	COG0019	diaminopimelate decarboxylase activity
BAPAT_1360	COG0529	Catalyzes the synthesis of activated sulfate
BAPAT_1361	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BAPAT_1365	COG1648	precorrin-2 dehydrogenase activity
BAPAT_1366	COG0733	neurotransmitter:sodium symporter activity
BAPAT_1370	COG1757	Na H antiporter
BAPAT_1373	COG4758	membrane
BAPAT_1374	COG4585	Histidine kinase
BAPAT_1375	COG2197	response regulator
BAPAT_1377	COG1114	Component of the transport system for branched-chain amino acids
BAPAT_1378	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BAPAT_1383	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BAPAT_1383	COG1017	nitric oxide dioxygenase activity
BAPAT_1386	COG0730	response to heat
BAPAT_1387	COG0306	phosphate transporter
BAPAT_1388	COG1392	Phosphate transport regulator
BAPAT_1389	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BAPAT_1393	COG3852	Histidine kinase
BAPAT_1394	COG1801	Protein of unknown function DUF72
BAPAT_1396	COG0582	viral genome integration into host DNA
BAPAT_1397	COG5002	protein histidine kinase activity
BAPAT_1401	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
BAPAT_1401	COG0392	lysyltransferase activity
BAPAT_1404	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
BAPAT_1405	COG1686	Belongs to the peptidase S11 family
BAPAT_1406	COG2715	membrane protein required for spore maturation
BAPAT_1407	COG0700	Nucleoside recognition
BAPAT_1408	COG1187	pseudouridine synthase activity
BAPAT_1410	COG1333	cytochrome c biogenesis protein
BAPAT_1411	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BAPAT_1412	COG0745	RESPONSE REGULATOR receiver
BAPAT_1413	COG5002	protein histidine kinase activity
BAPAT_1414	COG2096	Adenosyltransferase
BAPAT_1417	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
BAPAT_1418	COG1141	Ferredoxin
BAPAT_1419	COG4955	Helix-turn-helix domain
BAPAT_1420	COG0514	ATP-dependent DNA helicase (RecQ)
BAPAT_1421	COG1266	CAAX protease self-immunity
BAPAT_1423	COG1408	metallophosphoesterase
BAPAT_1424	COG1408	metallophosphoesterase
BAPAT_1426	COG4862	establishment of competence for transformation
BAPAT_1427	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
BAPAT_1431	COG0492	ferredoxin-NADP+ reductase activity
BAPAT_1432	COG0252	asparaginase activity
BAPAT_1445	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
BAPAT_1448	COG0142	geranyltranstransferase activity
BAPAT_1450	COG0142	geranyltranstransferase activity
BAPAT_1451	COG0105	UTP biosynthetic process
BAPAT_1454	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
BAPAT_1455	COG0457	Tetratricopeptide repeat
BAPAT_1459	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
BAPAT_1461	COG4347	Protein of unknown function (DUF1405)
BAPAT_1464	COG2738	Putative neutral zinc metallopeptidase
BAPAT_1466	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BAPAT_1467	COG1694	Mazg nucleotide pyrophosphohydrolase
BAPAT_1470	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
BAPAT_1471	COG0438	transferase activity, transferring glycosyl groups
BAPAT_1483	COG3935	DnaD domain protein
BAPAT_1484	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
BAPAT_1486	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BAPAT_1486	COG4499	WXG100 protein secretion system (Wss), protein YukC
BAPAT_1495	COG4474	Belongs to the UPF0398 family
BAPAT_1497	COG0116	Belongs to the methyltransferase superfamily
BAPAT_1499	COG1199	ATP-dependent helicase activity
BAPAT_1500	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
BAPAT_1502	COG3173	Aminoglycoside phosphotransferase
BAPAT_1503	COG0024	Methionine aminopeptidase
BAPAT_1506	COG2233	PERMEase
BAPAT_1507	COG2311	Membrane
BAPAT_1509	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
BAPAT_1511	COG0456	acetyltransferase
BAPAT_1516	COG0754	glutathionylspermidine amidase activity
BAPAT_1519	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BAPAT_1525	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
BAPAT_1528	COG1215	transferase activity, transferring glycosyl groups
BAPAT_1531	COG0438	transferase activity, transferring glycosyl groups
BAPAT_1534	COG0454	-acetyltransferase
BAPAT_1538	COG0328	RNA-DNA hybrid ribonuclease activity
BAPAT_1546	COG1280	lysine exporter protein (LysE YggA)
BAPAT_1549	COG3162	membrane
BAPAT_1550	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BAPAT_1551	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BAPAT_1553	COG0475	glutathione-regulated potassium exporter activity
BAPAT_1554	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BAPAT_1555	COG0789	Transcriptional regulator
BAPAT_1555	COG4978	Transcriptional regulator
BAPAT_1557	COG2323	membrane
BAPAT_1559	COG1434	Gram-negative-bacterium-type cell wall biogenesis
BAPAT_1570	COG1923	regulation of RNA biosynthetic process
BAPAT_1572	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
BAPAT_1573	COG1360	Flagellar Motor Protein
BAPAT_1574	COG2201	protein-glutamate methylesterase activity
BAPAT_1575	COG0643	Histidine kinase
BAPAT_1575	COG2198	Histidine kinase
BAPAT_1576	COG0643	Histidine kinase
BAPAT_1576	COG2198	Histidine kinase
BAPAT_1577	COG1776	CheC inhibitor of MCP methylation
BAPAT_1577	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BAPAT_1580	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
BAPAT_1585	COG1256	bacterial-type flagellum assembly
BAPAT_1586	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BAPAT_1591	COG1815	bacterial-type flagellum-dependent cell motility
BAPAT_1592	COG1558	bacterial-type flagellum-dependent cell motility
BAPAT_1593	COG1677	Flagellar hook-basal body complex protein FliE
BAPAT_1594	COG1766	The M ring may be actively involved in energy transduction
BAPAT_1596	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BAPAT_1598	COG1157	protein secretion by the type III secretion system
BAPAT_1608	COG0835	chemotaxis
BAPAT_1608	COG0784	Response regulator, receiver
BAPAT_1610	COG0463	Glycosyl transferase, family 2
BAPAT_1617	COG0457	Tetratricopeptide repeat
BAPAT_1617	COG0463	Glycosyl transferase, family 2
BAPAT_1622	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BAPAT_1623	COG0741	lytic transglycosylase activity
BAPAT_1625	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BAPAT_1627	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BAPAT_1627	COG1776	CheC inhibitor of MCP methylation
BAPAT_1629	COG1338	Plays a role in the flagellum-specific transport system
BAPAT_1630	COG1987	bacterial-type flagellum assembly
BAPAT_1632	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
BAPAT_1633	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
BAPAT_1636	COG4786	Flagellar basal body rod
BAPAT_1637	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
BAPAT_1642	COG1309	transcriptional regulator
BAPAT_1645	COG2329	Antibiotic biosynthesis monooxygenase
BAPAT_1652	COG3842	ATPase activity
BAPAT_1653	COG0725	ABC transporter, periplasmic molybdate-binding protein
BAPAT_1654	COG1177	transmembrane transport
BAPAT_1655	COG1234	tRNA 3'-trailer cleavage
BAPAT_1661	COG1686	Belongs to the peptidase S11 family
BAPAT_1663	COG0406	alpha-ribazole phosphatase activity
BAPAT_1670	COG0367	asparagine synthase
BAPAT_1676	COG1802	Transcriptional regulator
BAPAT_1677	COG0697	spore germination
BAPAT_1678	COG0523	cobalamin synthesis protein
BAPAT_1679	COG0701	Predicted permease
BAPAT_1681	COG0438	transferase activity, transferring glycosyl groups
BAPAT_1681	COG1216	Glycosyl transferase, family 2
BAPAT_1683	COG1757	Na H antiporter
BAPAT_1684	COG0114	fumarate hydratase activity
BAPAT_1688	COG0534	Mate efflux family protein
BAPAT_1689	COG0534	Mate efflux family protein
BAPAT_1690	COG3340	Belongs to the peptidase S51 family
BAPAT_1694	COG0785	Cytochrome C biogenesis protein
BAPAT_1701	COG2733	membrane
BAPAT_1708	COG1131	(ABC) transporter
BAPAT_1711	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BAPAT_1712	COG0528	UMP kinase activity
BAPAT_1714	COG1027	Aspartate ammonia-lyase
BAPAT_1715	COG1027	Aspartate ammonia-lyase
BAPAT_1716	COG0281	malic enzyme
BAPAT_1717	COG4191	Histidine kinase
BAPAT_1718	COG0784	Response regulator, receiver
BAPAT_1719	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
BAPAT_1732	COG0860	N-Acetylmuramoyl-L-alanine amidase
BAPAT_1737	COG1966	Carbon starvation protein
BAPAT_1739	COG0477	Major facilitator Superfamily
BAPAT_1740	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BAPAT_1742	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BAPAT_1743	COG4166	transmembrane transport
BAPAT_1746	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
BAPAT_1747	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
BAPAT_1750	COG2244	polysaccharide biosynthetic process
BAPAT_1751	COG0733	neurotransmitter:sodium symporter activity
BAPAT_1753	COG5566	PFAM Mor transcription activator
BAPAT_1754	COG2323	membrane
BAPAT_1757	COG2084	Dehydrogenase
BAPAT_1760	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BAPAT_1762	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BAPAT_1763	COG0028	Belongs to the TPP enzyme family
BAPAT_1764	COG0440	acetolactate synthase activity
BAPAT_1765	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
BAPAT_1767	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
BAPAT_1774	COG3384	dioxygenase
BAPAT_1776	COG3279	Response regulator of the LytR AlgR family
BAPAT_1777	COG0427	acetyl-CoA hydrolase
BAPAT_1781	COG1073	alpha beta
BAPAT_1782	COG4166	transmembrane transport
BAPAT_1788	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BAPAT_1793	COG1914	H( )-stimulated, divalent metal cation uptake system
BAPAT_1796	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BAPAT_1798	COG0531	amino acid
BAPAT_1799	COG0531	amino acid
BAPAT_1804	COG2390	Transcriptional regulator
BAPAT_1806	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BAPAT_1807	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
BAPAT_1809	COG4846	Membrane protein involved in cytochrome C biogenesis
BAPAT_1810	COG4224	UPF0291 protein
BAPAT_1814	COG0006	proline dipeptidase activity
BAPAT_1815	COG2132	Multicopper oxidase
BAPAT_1821	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
BAPAT_1822	COG1114	Component of the transport system for branched-chain amino acids
BAPAT_1823	COG1114	Component of the transport system for branched-chain amino acids
BAPAT_1826	COG1276	copper resistance
BAPAT_1826	COG2372	response to copper ion
BAPAT_1827	COG4549	nuclear export factor GLE1
BAPAT_1829	COG0697	spore germination
BAPAT_1830	COG0583	DNA-binding transcription factor activity
BAPAT_1831	COG1959	2 iron, 2 sulfur cluster binding
BAPAT_1832	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
BAPAT_1833	COG0778	Nitroreductase
BAPAT_1836	COG0628	permease
BAPAT_1837	COG0039	L-malate dehydrogenase activity
BAPAT_1838	COG1231	oxidoreductase activity
BAPAT_1839	COG0523	cobalamin synthesis protein
BAPAT_1842	COG0318	PFAM AMP-dependent synthetase and ligase
BAPAT_1843	COG2030	dehydratase
BAPAT_1844	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BAPAT_1846	COG0411	ABC transporter
BAPAT_1850	COG0583	DNA-binding transcription factor activity
BAPAT_1854	COG1846	Transcriptional regulator
BAPAT_1856	COG1271	oxidase subunit
BAPAT_1857	COG1294	oxidase, subunit
BAPAT_1858	COG4988	ABC transporter
BAPAT_1859	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
BAPAT_1863	COG1686	Belongs to the peptidase S11 family
BAPAT_1865	COG1388	LysM domain
BAPAT_1865	COG0791	NLP P60 protein
BAPAT_1867	COG1132	(ABC) transporter
BAPAT_1868	COG1132	(ABC) transporter
BAPAT_1869	COG0745	RESPONSE REGULATOR receiver
BAPAT_1871	COG5002	protein histidine kinase activity
BAPAT_1873	COG0300	oxidoreductase activity
BAPAT_1876	COG0726	polysaccharide deacetylase
BAPAT_1881	COG0460	homoserine dehydrogenase
BAPAT_1886	COG1316	TRANSCRIPTIONal
BAPAT_1888	COG0745	RESPONSE REGULATOR receiver
BAPAT_1889	COG5002	protein histidine kinase activity
BAPAT_1890	COG0726	polysaccharide deacetylase
BAPAT_1892	COG1285	pathogenesis
BAPAT_1893	COG1247	-acetyltransferase
BAPAT_1895	COG4264	IucA IucC family
BAPAT_1896	COG0318	PFAM AMP-dependent synthetase and ligase
BAPAT_1899	COG1082	Xylose isomerase domain protein TIM barrel
BAPAT_1901	COG2814	Major facilitator Superfamily
BAPAT_1902	COG1279	arginine transmembrane transporter activity
BAPAT_1904	COG1752	Esterase of the alpha-beta hydrolase superfamily
BAPAT_1912	COG0577	efflux transmembrane transporter activity
BAPAT_1913	COG2002	toxin-antitoxin pair type II binding
BAPAT_1914	COG1404	Belongs to the peptidase S8 family
BAPAT_1915	COG0640	Transcriptional regulator
BAPAT_1916	COG0667	Aldo Keto reductase
BAPAT_1917	COG2814	Major facilitator Superfamily
BAPAT_1922	COG0840	transmembrane signaling receptor activity
BAPAT_1925	COG3949	Membrane
BAPAT_1926	COG0783	Belongs to the Dps family
BAPAT_1929	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BAPAT_1931	COG1231	oxidoreductase activity
BAPAT_1933	COG4989	oxidoreductase activity
BAPAT_1934	COG0523	cobalamin synthesis protein
BAPAT_1935	COG0456	acetyltransferase
BAPAT_1944	COG3443	Belongs to the bacterial solute-binding protein 9 family
BAPAT_1944	COG0803	Belongs to the bacterial solute-binding protein 9 family
BAPAT_1946	COG0702	epimerase
BAPAT_1948	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BAPAT_1950	COG4166	transmembrane transport
BAPAT_1953	COG0406	alpha-ribazole phosphatase activity
BAPAT_1955	COG5337	Spore coat protein CotH
BAPAT_1956	COG1051	belongs to the nudix hydrolase family
BAPAT_1957	COG0586	Pfam SNARE associated Golgi protein
BAPAT_1958	COG2244	polysaccharide biosynthetic process
BAPAT_1960	COG0701	Predicted permease
BAPAT_1961	COG3689	TIGRFAM TIGR03943 family protein
BAPAT_1962	COG1607	acyl-coa hydrolase
BAPAT_1963	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BAPAT_1967	COG0702	epimerase
BAPAT_1968	COG2839	Protein conserved in bacteria
BAPAT_1969	COG1253	flavin adenine dinucleotide binding
BAPAT_1972	COG1114	Component of the transport system for branched-chain amino acids
BAPAT_1973	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BAPAT_1975	COG0860	N-Acetylmuramoyl-L-alanine amidase
BAPAT_1977	COG1876	peptidase activity
BAPAT_1979	COG0154	amidase activity
BAPAT_1980	COG2211	Major facilitator Superfamily
BAPAT_1984	COG0561	phosphatase activity
BAPAT_1986	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BAPAT_1990	COG1819	glycosyl
BAPAT_1991	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BAPAT_1992	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BAPAT_1999	COG0456	acetyltransferase
BAPAT_2007	COG3874	Sporulation protein YtfJ
BAPAT_2012	COG2226	methyltransferase
BAPAT_2017	COG1082	Xylose isomerase domain protein TIM barrel
BAPAT_2018	COG0346	lactoylglutathione lyase activity
BAPAT_2020	COG0604	alcohol dehydrogenase
BAPAT_2021	COG1595	DNA-templated transcription, initiation
BAPAT_2026	COG0386	Belongs to the glutathione peroxidase family
BAPAT_2027	COG1305	Transglutaminase-like
BAPAT_2028	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
BAPAT_2029	COG0714	Associated with various cellular activities
BAPAT_2032	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
BAPAT_2033	COG1140	nitrate reductase beta subunit
BAPAT_2034	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
BAPAT_2035	COG2181	nitrate reductase activity
BAPAT_2039	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BAPAT_2040	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
BAPAT_2041	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BAPAT_2042	COG0303	'Molybdopterin
BAPAT_2043	COG0314	molybdopterin synthase activity
BAPAT_2045	COG2223	nitrite transmembrane transporter activity
BAPAT_2048	COG1648	precorrin-2 dehydrogenase activity
BAPAT_2050	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
BAPAT_2050	COG1587	Uroporphyrinogen-III synthase
BAPAT_2051	COG2146	nitrite reductase [NAD(P)H] activity
BAPAT_2052	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BAPAT_2053	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
BAPAT_2061	COG2359	stage V sporulation protein S
BAPAT_2064	COG5632	N-Acetylmuramoyl-L-alanine amidase
BAPAT_2068	COG1418	mRNA catabolic process
BAPAT_2069	COG0488	(ABC) transporter
BAPAT_2072	COG0629	single-stranded DNA binding
BAPAT_2074	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BAPAT_2075	COG1413	lyase activity
BAPAT_2078	COG2136	Putative SAM-dependent methyltransferase
BAPAT_2078	COG2521	methyltransferase
BAPAT_2079	COG0018	arginyl-trna synthetase
BAPAT_2084	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
BAPAT_2087	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
BAPAT_2088	COG0017	Asparaginyl-tRNA synthetase
BAPAT_2092	COG1674	ftsk spoiiie
BAPAT_2110	COG1929	Belongs to the glycerate kinase type-1 family
BAPAT_2111	COG0471	metal ion transport
BAPAT_2112	COG0745	RESPONSE REGULATOR receiver
BAPAT_2113	COG3850	Histidine kinase
BAPAT_2113	COG5002	protein histidine kinase activity
BAPAT_2116	COG0733	neurotransmitter:sodium symporter activity
BAPAT_2121	COG2610	gluconate transmembrane transporter activity
BAPAT_2122	COG1454	alcohol dehydrogenase
BAPAT_2123	COG1794	racemase activity, acting on amino acids and derivatives
BAPAT_2125	COG0456	acetyltransferase
BAPAT_2127	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
BAPAT_2129	COG1131	(ABC) transporter
BAPAT_2130	COG4473	ABC transporter
BAPAT_2133	COG0546	phosphoglycolate phosphatase activity
BAPAT_2137	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BAPAT_2140	COG0768	penicillin binding
BAPAT_2141	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
BAPAT_2142	COG0204	Acyl-transferase
BAPAT_2143	COG1272	protein, Hemolysin III
BAPAT_2145	COG0805	protein transport
BAPAT_2147	COG1307	EDD domain protein, DegV family
BAPAT_2148	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
BAPAT_2149	COG1999	signal sequence binding
BAPAT_2150	COG0071	Belongs to the small heat shock protein (HSP20) family
BAPAT_2151	COG0367	asparagine synthase
BAPAT_2154	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BAPAT_2155	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BAPAT_2159	COG1335	isochorismatase
BAPAT_2160	COG1051	belongs to the nudix hydrolase family
BAPAT_2162	COG0668	transmembrane transport
BAPAT_2163	COG2203	Gaf domain
BAPAT_2163	COG4585	Histidine kinase
BAPAT_2164	COG2197	response regulator
BAPAT_2166	COG1737	Transcriptional regulator
BAPAT_2167	COG1064	alcohol dehydrogenase
BAPAT_2173	COG1070	Carbohydrate kinase
BAPAT_2180	COG1125	glycine betaine transport
BAPAT_2180	COG0517	IMP dehydrogenase activity
BAPAT_2181	COG1174	glycine betaine transport
BAPAT_2188	COG1253	flavin adenine dinucleotide binding
BAPAT_2189	COG1012	belongs to the aldehyde dehydrogenase family
BAPAT_2190	COG5506	Protein of unknown function (DUF1694)
BAPAT_2194	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BAPAT_2195	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
BAPAT_2196	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
BAPAT_2197	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BAPAT_2198	COG0456	acetyltransferase
BAPAT_2199	COG3829	transcription factor binding
BAPAT_2200	COG1509	lysine 2,3-aminomutase activity
BAPAT_2208	COG4326	sporulation control protein
BAPAT_2209	COG0671	phosphoesterase, PA-phosphatase related
BAPAT_2210	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
BAPAT_2211	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BAPAT_2217	COG1715	Restriction endonuclease
BAPAT_2217	COG1787	Restriction endonuclease
BAPAT_2232	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BAPAT_2239	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BAPAT_2239	COG4499	WXG100 protein secretion system (Wss), protein YukC
BAPAT_2240	COG2814	Major facilitator Superfamily
BAPAT_2241	COG4841	protein insertion into membrane
BAPAT_2242	COG0372	Belongs to the citrate synthase family
BAPAT_2243	COG2079	MmgE PrpD family protein
BAPAT_2244	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
BAPAT_2246	COG1960	acyl-CoA dehydrogenase activity
BAPAT_2247	COG2084	Dehydrogenase
BAPAT_2248	COG1012	belongs to the aldehyde dehydrogenase family
BAPAT_2249	COG1280	lysine exporter protein (LysE YggA)
BAPAT_2250	COG1024	Enoyl-CoA hydratase
BAPAT_2253	COG0420	3'-5' exonuclease activity
BAPAT_2254	COG0419	ATPase involved in DNA repair
BAPAT_2260	COG2223	nitrite transmembrane transporter activity
BAPAT_2261	COG1028	Short-chain dehydrogenase reductase Sdr
BAPAT_2262	COG1169	isochorismate synthase
BAPAT_2263	COG1021	2,3-dihydroxybenzoate-AMP ligase
BAPAT_2264	COG3433	isochorismatase activity
BAPAT_2264	COG1535	isochorismatase
BAPAT_2265	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BAPAT_2266	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BAPAT_2267	COG3251	PFAM MbtH domain protein
BAPAT_2268	COG2814	Major facilitator Superfamily
BAPAT_2271	COG0776	regulation of translation
BAPAT_2273	COG2318	DinB family
BAPAT_2275	COG1115	amino acid carrier protein
BAPAT_2276	COG1115	amino acid carrier protein
BAPAT_2279	COG2329	Antibiotic biosynthesis monooxygenase
BAPAT_2280	COG1187	pseudouridine synthase activity
BAPAT_2282	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
BAPAT_2283	COG1136	(ABC) transporter
BAPAT_2286	COG0596	Alpha beta hydrolase
BAPAT_2287	COG2814	Major facilitator Superfamily
BAPAT_2292	COG2226	methyltransferase
BAPAT_2300	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BAPAT_2307	COG1247	-acetyltransferase
BAPAT_2315	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BAPAT_2317	COG1278	Cold shock
BAPAT_2320	COG0010	Belongs to the arginase family
BAPAT_2321	COG0561	phosphatase activity
BAPAT_2329	COG0583	DNA-binding transcription factor activity
BAPAT_2330	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BAPAT_2333	COG0583	DNA-binding transcription factor activity
BAPAT_2334	COG2258	MOSC domain
BAPAT_2337	COG1132	(ABC) transporter
BAPAT_2338	COG1132	(ABC) transporter
BAPAT_2341	COG1396	sequence-specific DNA binding
BAPAT_2347	COG1595	DNA-templated transcription, initiation
BAPAT_2353	COG1649	PFAM Uncharacterised BCR, COG1649
BAPAT_2358	COG2971	BadF BadG BcrA BcrD
BAPAT_2359	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
BAPAT_2360	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
BAPAT_2364	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BAPAT_2371	COG1309	transcriptional regulator
BAPAT_2375	COG0577	efflux transmembrane transporter activity
BAPAT_2375	COG1136	(ABC) transporter
BAPAT_2376	COG3615	Tellurite resistance protein tehB
BAPAT_2376	COG0500	methyltransferase
BAPAT_2378	COG2226	methyltransferase
BAPAT_2379	COG3961	Belongs to the TPP enzyme family
BAPAT_2380	COG1846	Transcriptional regulator
BAPAT_2389	COG2195	Cleaves the N-terminal amino acid of tripeptides
BAPAT_2393	COG1595	DNA-templated transcription, initiation
BAPAT_2395	COG0768	penicillin binding
BAPAT_2397	COG2367	Beta-lactamase
BAPAT_2398	COG0671	phosphoesterase, PA-phosphatase related
BAPAT_2399	COG1609	Transcriptional regulator
BAPAT_2400	COG2814	Major facilitator Superfamily
BAPAT_2401	COG0673	inositol 2-dehydrogenase activity
BAPAT_2403	COG1012	belongs to the aldehyde dehydrogenase family
BAPAT_2413	COG0737	Belongs to the 5'-nucleotidase family
BAPAT_2416	COG0457	Tetratricopeptide repeat
BAPAT_2417	COG1476	TRANSCRIPTIONal
BAPAT_2419	COG1876	peptidase activity
BAPAT_2424	COG1309	transcriptional regulator
BAPAT_2428	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BAPAT_2433	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BAPAT_2436	COG1131	(ABC) transporter
BAPAT_2438	COG1309	transcriptional regulator
BAPAT_2441	COG1960	acyl-CoA dehydrogenase activity
BAPAT_2442	COG0439	Biotin carboxylase
BAPAT_2443	COG0511	ligase activity, forming carbon-carbon bonds
BAPAT_2444	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BAPAT_2445	COG1024	Enoyl-CoA hydratase
BAPAT_2446	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
BAPAT_2447	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BAPAT_2449	COG1247	-acetyltransferase
BAPAT_2450	COG0572	uridine kinase
BAPAT_2452	COG2318	DinB family
BAPAT_2453	COG1686	Belongs to the peptidase S11 family
BAPAT_2458	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
BAPAT_2463	COG3227	Zinc metalloprotease (Elastase)
BAPAT_2469	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
BAPAT_2469	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
BAPAT_2472	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BAPAT_2474	COG2814	Major facilitator Superfamily
BAPAT_2477	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
BAPAT_2481	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BAPAT_2484	COG1063	alcohol dehydrogenase
BAPAT_2487	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BAPAT_2488	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BAPAT_2490	COG3773	Cell wall hydrolase
BAPAT_2492	COG0745	RESPONSE REGULATOR receiver
BAPAT_2494	COG2205	protein histidine kinase activity
BAPAT_2499	COG1136	(ABC) transporter
BAPAT_2500	COG0577	efflux transmembrane transporter activity
BAPAT_2501	COG0577	efflux transmembrane transporter activity
BAPAT_2505	COG0460	homoserine dehydrogenase
BAPAT_2506	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BAPAT_2508	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
BAPAT_2522	COG2124	cytochrome p450
BAPAT_2530	COG0561	phosphatase activity
BAPAT_2532	COG5002	protein histidine kinase activity
BAPAT_2534	COG1819	glycosyl
BAPAT_2535	COG1794	racemase activity, acting on amino acids and derivatives
BAPAT_2537	COG1122	ATPase activity
BAPAT_2540	COG2205	protein histidine kinase activity
BAPAT_2544	COG0604	alcohol dehydrogenase
BAPAT_2547	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BAPAT_2554	COG0693	protein deglycase activity
BAPAT_2559	COG2814	Major facilitator Superfamily
BAPAT_2562	COG0584	glycerophosphoryl diester phosphodiesterase
BAPAT_2565	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BAPAT_2566	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BAPAT_2567	COG0697	spore germination
BAPAT_2575	COG2223	nitrite transmembrane transporter activity
BAPAT_2577	COG2816	NAD+ diphosphatase activity
BAPAT_2578	COG0592	DNA-directed DNA polymerase activity
BAPAT_2579	COG1051	belongs to the nudix hydrolase family
BAPAT_2586	COG3878	Protein conserved in bacteria
BAPAT_2596	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BAPAT_2599	COG0322	excinuclease ABC activity
BAPAT_2608	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BAPAT_2613	COG1011	Hydrolase
BAPAT_2617	COG0076	glutamate decarboxylase activity
BAPAT_2621	COG1523	belongs to the glycosyl hydrolase 13 family
BAPAT_2622	COG3227	Zinc metalloprotease (Elastase)
BAPAT_2626	COG0201	protein transport
BAPAT_2628	COG0697	spore germination
BAPAT_2629	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BAPAT_2635	COG4129	membrane
BAPAT_2636	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BAPAT_2639	COG2959	enzyme of heme biosynthesis
BAPAT_2640	COG3773	Cell wall hydrolase
BAPAT_2640	COG3409	Peptidoglycan-binding domain 1 protein
BAPAT_2643	COG3483	tryptophan 2,3-dioxygenase activity
BAPAT_2644	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
BAPAT_2645	COG3844	kynureninase activity
BAPAT_2646	COG1309	transcriptional regulator
BAPAT_2652	COG3284	Transcriptional regulator
BAPAT_2656	COG1349	DNA-binding transcription factor activity
BAPAT_2660	COG1959	2 iron, 2 sulfur cluster binding
BAPAT_2664	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BAPAT_2665	COG0508	dehydrogenase complex catalyzes the overall conversion of
BAPAT_2666	COG0022	dehydrogenase e1 component
BAPAT_2667	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
BAPAT_2669	COG1028	Short-chain dehydrogenase reductase Sdr
BAPAT_2670	COG0456	acetyltransferase
BAPAT_2670	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
BAPAT_2675	COG4176	ABC-type proline glycine betaine transport system permease component
BAPAT_2676	COG4175	Glycine betaine
BAPAT_2676	COG0517	IMP dehydrogenase activity
BAPAT_2678	COG0740	serine-type endopeptidase activity
BAPAT_2681	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
BAPAT_2682	COG2153	protein acetylation
BAPAT_2683	COG3397	chitin binding
BAPAT_2687	COG2205	protein histidine kinase activity
BAPAT_2693	COG2333	competence protein COMEC
BAPAT_2693	COG0658	competence protein
BAPAT_2703	COG3973	AAA domain
BAPAT_2706	COG2105	PFAM AIG2 family protein
BAPAT_2707	COG0514	ATP-dependent DNA helicase (RecQ)
BAPAT_2710	COG4637	Psort location Cytoplasmic, score
BAPAT_2716	COG3397	chitin binding
BAPAT_2718	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BAPAT_2719	COG1115	amino acid carrier protein
BAPAT_2720	COG1012	belongs to the aldehyde dehydrogenase family
BAPAT_2721	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BAPAT_2723	COG3938	Belongs to the proline racemase family
BAPAT_2724	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BAPAT_2732	COG0586	Pfam SNARE associated Golgi protein
BAPAT_2735	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
BAPAT_2736	COG0519	Catalyzes the synthesis of GMP from XMP
BAPAT_2737	COG4166	transmembrane transport
BAPAT_2739	COG4948	Mandelate Racemase Muconate Lactonizing
BAPAT_2748	COG2936	dipeptidyl-peptidase activity
BAPAT_2749	COG5002	protein histidine kinase activity
BAPAT_2750	COG0745	RESPONSE REGULATOR receiver
BAPAT_2757	COG1164	Oligoendopeptidase f
BAPAT_2760	COG1307	EDD domain protein, DegV family
BAPAT_2764	COG2814	Major facilitator Superfamily
BAPAT_2766	COG1664	Polymer-forming cytoskeletal
BAPAT_2767	COG0789	Transcriptional regulator
BAPAT_2768	COG4533	DNA binding
BAPAT_2769	COG0477	Major facilitator Superfamily
BAPAT_2769	COG2814	Major facilitator Superfamily
BAPAT_2773	COG2261	transglycosylase associated protein
BAPAT_2776	COG2226	methyltransferase
BAPAT_2783	COG0436	Aminotransferase
BAPAT_2784	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
BAPAT_2785	COG5146	pantothenate kinase activity
BAPAT_2789	COG1131	(ABC) transporter
BAPAT_2796	COG0628	permease
BAPAT_2798	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BAPAT_2799	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BAPAT_2800	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BAPAT_2801	COG1116	anion transmembrane transporter activity
BAPAT_2809	COG2746	aminoglycoside 3-N-acetyltransferase activity
BAPAT_2814	COG0697	spore germination
BAPAT_2815	COG2318	DinB family
BAPAT_2822	COG0726	polysaccharide deacetylase
BAPAT_2824	COG0861	Integral membrane protein TerC family
BAPAT_2825	COG1368	sulfuric ester hydrolase activity
BAPAT_2826	COG0488	(ABC) transporter
BAPAT_2828	COG2409	Drug exporters of the RND superfamily
BAPAT_2828	COG1033	growth of symbiont in host cell
BAPAT_2829	COG2409	Drug exporters of the RND superfamily
BAPAT_2829	COG1033	growth of symbiont in host cell
BAPAT_2830	COG1309	transcriptional regulator
BAPAT_2833	COG0287	Prephenate dehydrogenase
BAPAT_2834	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
BAPAT_2835	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
BAPAT_2836	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
BAPAT_2836	COG1605	Chorismate mutase
BAPAT_2844	COG1388	LysM domain
BAPAT_2844	COG3584	3D domain protein
BAPAT_2847	COG1595	DNA-templated transcription, initiation
BAPAT_2852	COG1879	ABC-type sugar transport system periplasmic component
BAPAT_2855	COG1172	Belongs to the binding-protein-dependent transport system permease family
BAPAT_2857	COG2390	Transcriptional regulator
BAPAT_2858	COG1070	Carbohydrate kinase
BAPAT_2864	COG2329	Antibiotic biosynthesis monooxygenase
BAPAT_2868	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BAPAT_2870	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
BAPAT_2872	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BAPAT_2873	COG4187	Peptidase family M20/M25/M40
BAPAT_2874	COG1414	Transcriptional regulator
BAPAT_2875	COG0833	amino acid
BAPAT_2876	COG1690	Belongs to the RtcB family
BAPAT_2877	COG3239	Fatty acid desaturase
BAPAT_2878	COG1785	Belongs to the alkaline phosphatase family
BAPAT_2880	COG3655	Transcriptional regulator
BAPAT_2883	COG4377	Putative membrane peptidase family (DUF2324)
BAPAT_2885	COG3279	Response regulator of the LytR AlgR family
BAPAT_2887	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BAPAT_2888	COG0346	lactoylglutathione lyase activity
BAPAT_2893	COG0714	Associated with various cellular activities
BAPAT_2898	COG0463	Glycosyl transferase, family 2
BAPAT_2902	COG0463	Glycosyl transferase, family 2
BAPAT_2904	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BAPAT_2905	COG0753	catalase activity
BAPAT_2907	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
BAPAT_2913	COG0714	Associated with various cellular activities
BAPAT_2915	COG0778	Nitroreductase
BAPAT_2916	COG1846	Transcriptional regulator
BAPAT_2925	COG1725	Transcriptional regulator
BAPAT_2927	COG0577	efflux transmembrane transporter activity
BAPAT_2927	COG1136	(ABC) transporter
BAPAT_2932	COG2207	Transcriptional regulator
BAPAT_2933	COG0456	acetyltransferase
BAPAT_2938	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BAPAT_2942	COG0642	Histidine kinase
BAPAT_2943	COG0745	RESPONSE REGULATOR receiver
BAPAT_2944	COG0596	Alpha beta hydrolase
BAPAT_2950	COG0730	response to heat
BAPAT_2952	COG0833	amino acid
BAPAT_2954	COG4335	DNA alkylation repair
BAPAT_2964	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
BAPAT_2971	COG1984	allophanate hydrolase subunit 2
BAPAT_2972	COG1984	allophanate hydrolase subunit 2
BAPAT_2973	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
BAPAT_2974	COG1414	Transcriptional regulator
BAPAT_2977	COG0860	N-Acetylmuramoyl-L-alanine amidase
BAPAT_2978	COG0640	Transcriptional regulator
BAPAT_2980	COG1960	acyl-CoA dehydrogenase activity
BAPAT_2987	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
BAPAT_2990	COG3848	Pyruvate phosphate dikinase
BAPAT_2990	COG0574	Belongs to the PEP-utilizing enzyme family
BAPAT_2991	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BAPAT_2994	COG5577	PFAM Coat F domain
BAPAT_2995	COG3403	YqcI/YcgG family
BAPAT_2996	COG1280	lysine exporter protein (LysE YggA)
BAPAT_2997	COG1113	amino acid transport
BAPAT_2998	COG1113	amino acid transport
BAPAT_3004	COG1063	alcohol dehydrogenase
BAPAT_3007	COG1027	Aspartate ammonia-lyase
BAPAT_3008	COG1027	Aspartate ammonia-lyase
BAPAT_3009	COG0252	asparaginase activity
BAPAT_3010	COG1396	sequence-specific DNA binding
BAPAT_3012	COG0322	excinuclease ABC activity
BAPAT_3013	COG0531	amino acid
BAPAT_3014	COG0531	amino acid
BAPAT_3015	COG1114	Component of the transport system for branched-chain amino acids
BAPAT_3017	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BAPAT_3019	COG0281	malic enzyme
BAPAT_3022	COG0531	amino acid
BAPAT_3023	COG0697	spore germination
BAPAT_3025	COG0784	Response regulator, receiver
BAPAT_3026	COG4191	Histidine kinase
BAPAT_3027	COG4191	Histidine kinase
BAPAT_3028	COG2066	Belongs to the glutaminase family
BAPAT_3029	COG1115	amino acid carrier protein
BAPAT_3035	COG0737	Belongs to the 5'-nucleotidase family
BAPAT_3036	COG0753	catalase activity
BAPAT_3037	COG2267	carboxylic ester hydrolase activity
BAPAT_3038	COG1335	isochorismatase
BAPAT_3042	COG0583	DNA-binding transcription factor activity
BAPAT_3043	COG1846	Transcriptional regulator
BAPAT_3044	COG0598	Magnesium transport protein CorA
BAPAT_3051	COG0415	Belongs to the DNA photolyase family
BAPAT_3052	COG0288	reversible hydration of carbon dioxide
BAPAT_3054	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BAPAT_3055	COG5609	conserved protein (DUF2294)
BAPAT_3057	COG1575	Belongs to the MenA family. Type 1 subfamily
BAPAT_3058	COG2267	carboxylic ester hydrolase activity
BAPAT_3059	COG0803	Belongs to the bacterial solute-binding protein 9 family
BAPAT_3060	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BAPAT_3061	COG1121	(ABC) transporter
BAPAT_3067	COG0798	PFAM Bile acid sodium symporter
BAPAT_3068	COG0346	lactoylglutathione lyase activity
BAPAT_3069	COG0640	Transcriptional regulator
BAPAT_3072	COG0443	Heat shock 70 kDa protein
BAPAT_3075	COG1522	sequence-specific DNA binding
BAPAT_3078	COG0346	lactoylglutathione lyase activity
BAPAT_3082	COG2169	Transcriptional regulator
BAPAT_3090	COG2814	Major facilitator Superfamily
BAPAT_3095	COG0745	RESPONSE REGULATOR receiver
BAPAT_3096	COG3850	Histidine kinase
BAPAT_3096	COG5002	protein histidine kinase activity
BAPAT_3101	COG2515	1-aminocyclopropane-1-carboxylate deaminase
BAPAT_3107	COG1476	TRANSCRIPTIONal
BAPAT_3111	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BAPAT_3112	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BAPAT_3114	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BAPAT_3115	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
BAPAT_3118	COG1136	(ABC) transporter
BAPAT_3119	COG0577	efflux transmembrane transporter activity
BAPAT_3122	COG3850	Histidine kinase
BAPAT_3122	COG5002	protein histidine kinase activity
BAPAT_3124	COG2364	Membrane
BAPAT_3125	COG1846	Transcriptional regulator
BAPAT_3126	COG0456	acetyltransferase
BAPAT_3127	COG0456	acetyltransferase
BAPAT_3128	COG2808	Putative FMN-binding domain
BAPAT_3129	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BAPAT_3130	COG2271	Major facilitator Superfamily
BAPAT_3131	COG1556	Lactate utilization protein
BAPAT_3132	COG1139	Iron-sulfur cluster binding protein
BAPAT_3134	COG0583	DNA-binding transcription factor activity
BAPAT_3136	COG1619	proteins homologs of microcin C7 resistance protein MccF
BAPAT_3139	COG0738	Major facilitator superfamily
BAPAT_3140	COG0673	inositol 2-dehydrogenase activity
BAPAT_3141	COG0561	phosphatase activity
BAPAT_3142	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
BAPAT_3143	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
BAPAT_3144	COG1609	Transcriptional regulator
BAPAT_3145	COG0457	Tetratricopeptide repeat
BAPAT_3149	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BAPAT_3156	COG0534	Mate efflux family protein
BAPAT_3159	COG2184	nucleotidyltransferase activity
BAPAT_3160	COG2814	Major facilitator Superfamily
BAPAT_3161	COG1309	transcriptional regulator
BAPAT_3163	COG0814	amino acid
BAPAT_3164	COG1760	l-serine dehydratase
BAPAT_3165	COG1760	l-serine dehydratase
BAPAT_3167	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BAPAT_3168	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
BAPAT_3172	COG1522	sequence-specific DNA binding
BAPAT_3173	COG0531	amino acid
BAPAT_3176	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BAPAT_3180	COG1595	DNA-templated transcription, initiation
BAPAT_3183	COG0662	Cupin 2, conserved barrel domain protein
BAPAT_3184	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BAPAT_3184	COG2207	Transcriptional regulator
BAPAT_3196	COG0477	Major facilitator Superfamily
BAPAT_3199	COG2814	Major facilitator Superfamily
BAPAT_3202	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
BAPAT_3203	COG1131	(ABC) transporter
BAPAT_3208	COG2076	Multidrug Resistance protein
BAPAT_3209	COG1309	transcriptional regulator
BAPAT_3211	COG2031	fatty acid transporter
BAPAT_3213	COG2249	NAD(P)H dehydrogenase (quinone) activity
BAPAT_3220	COG1122	ATPase activity
BAPAT_3221	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BAPAT_3224	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
BAPAT_3225	COG1288	antiporter activity
BAPAT_3226	COG2356	endonuclease I
BAPAT_3229	COG3620	sequence-specific DNA binding
BAPAT_3230	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
BAPAT_3231	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BAPAT_3232	COG0124	histidyl-tRNA synthetase
BAPAT_3235	COG1733	regulation of RNA biosynthetic process
BAPAT_3236	COG0778	Nitroreductase
BAPAT_3240	COG1028	Short-chain dehydrogenase reductase Sdr
BAPAT_3242	COG1131	(ABC) transporter
BAPAT_3247	COG1011	Hydrolase
BAPAT_3254	COG0346	lactoylglutathione lyase activity
BAPAT_3255	COG1940	carbohydrate kinase activity
BAPAT_3256	COG0738	Major facilitator superfamily
BAPAT_3257	COG0110	maltose O-acetyltransferase activity
BAPAT_3259	COG1136	(ABC) transporter
BAPAT_3260	COG0180	Tryptophanyl-tRNA synthetase
BAPAT_3261	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
BAPAT_3262	COG0628	permease
BAPAT_3265	COG2226	methyltransferase
BAPAT_3267	COG0477	Major facilitator Superfamily
BAPAT_3274	COG1253	flavin adenine dinucleotide binding
BAPAT_3275	COG0789	Transcriptional regulator
BAPAT_3276	COG0697	spore germination
BAPAT_3278	COG1357	PFAM Pentapeptide repeats (8 copies)
BAPAT_3279	COG3813	Protein conserved in bacteria
BAPAT_3280	COG2706	6-phosphogluconolactonase activity
BAPAT_3281	COG1070	Carbohydrate kinase
BAPAT_3283	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
BAPAT_3284	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
BAPAT_3286	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
BAPAT_3287	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
BAPAT_3288	COG0604	alcohol dehydrogenase
BAPAT_3289	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BAPAT_3292	COG1028	Short-chain dehydrogenase reductase Sdr
BAPAT_3297	COG0656	L-ascorbic acid biosynthetic process
BAPAT_3298	COG2814	Major facilitator Superfamily
BAPAT_3301	COG0346	lactoylglutathione lyase activity
BAPAT_3302	COG0814	amino acid
BAPAT_3307	COG1393	Belongs to the ArsC family
BAPAT_3308	COG1733	regulation of RNA biosynthetic process
BAPAT_3309	COG2188	Transcriptional regulator
BAPAT_3310	COG0673	inositol 2-dehydrogenase activity
BAPAT_3311	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
BAPAT_3312	COG1733	regulation of RNA biosynthetic process
BAPAT_3313	COG1733	regulation of RNA biosynthetic process
BAPAT_3316	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BAPAT_3320	COG0384	phenazine biosynthesis protein PhzF
BAPAT_3322	COG1028	Short-chain dehydrogenase reductase Sdr
BAPAT_3324	COG0318	PFAM AMP-dependent synthetase and ligase
BAPAT_3326	COG2249	NAD(P)H dehydrogenase (quinone) activity
BAPAT_3327	COG1733	regulation of RNA biosynthetic process
BAPAT_3331	COG0726	polysaccharide deacetylase
BAPAT_3334	COG1191	sigma factor activity
BAPAT_3338	COG1309	transcriptional regulator
BAPAT_3347	COG1151	hydroxylamine reductase activity
BAPAT_3350	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BAPAT_3351	COG3757	hydrolase, family 25
BAPAT_3351	COG3409	Peptidoglycan-binding domain 1 protein
BAPAT_3358	COG2072	flavoprotein involved in K transport
BAPAT_3365	COG0604	alcohol dehydrogenase
BAPAT_3366	COG1113	amino acid transport
BAPAT_3367	COG2814	Major facilitator Superfamily
BAPAT_3374	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
BAPAT_3375	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
BAPAT_3380	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BAPAT_3382	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAPAT_3383	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAPAT_3384	COG3739	integral membrane protein
BAPAT_3385	COG0384	phenazine biosynthesis protein PhzF
BAPAT_3391	COG0583	DNA-binding transcription factor activity
BAPAT_3395	COG1193	negative regulation of DNA recombination
BAPAT_3400	COG2162	N-hydroxyarylamine O-acetyltransferase activity
BAPAT_3401	COG1164	Oligoendopeptidase f
BAPAT_3402	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BAPAT_3408	COG0584	glycerophosphoryl diester phosphodiesterase
BAPAT_3412	COG0640	Transcriptional regulator
BAPAT_3413	COG0604	alcohol dehydrogenase
BAPAT_3415	COG0457	Tetratricopeptide repeat
BAPAT_3418	COG2808	Putative FMN-binding domain
BAPAT_3420	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
BAPAT_3422	COG0385	Bile acid
BAPAT_3423	COG0277	FAD linked oxidase domain protein
BAPAT_3429	COG1216	Glycosyl transferase, family 2
BAPAT_3430	COG1024	Enoyl-CoA hydratase
BAPAT_3432	COG1285	pathogenesis
BAPAT_3434	COG2514	catechol 2,3-dioxygenase activity
BAPAT_3435	COG2720	vancomycin resistance protein
BAPAT_3441	COG1278	Cold shock
BAPAT_3443	COG0716	FMN binding
BAPAT_3449	COG1028	Short-chain dehydrogenase reductase Sdr
BAPAT_3451	COG0165	Argininosuccinate lyase
BAPAT_3455	COG4145	pantothenate transmembrane transporter activity
BAPAT_3457	COG1012	belongs to the aldehyde dehydrogenase family
BAPAT_3458	COG1028	Short-chain dehydrogenase reductase Sdr
BAPAT_3460	COG1657	PFAM Prenyltransferase squalene oxidase
BAPAT_3461	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
BAPAT_3462	COG2962	Rard protein
BAPAT_3463	COG3326	Membrane
BAPAT_3466	COG0489	protein tyrosine kinase activity
BAPAT_3468	COG0314	molybdopterin synthase activity
BAPAT_3469	COG0303	'Molybdopterin
BAPAT_3470	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BAPAT_3471	COG2116	formate transmembrane transporter activity
BAPAT_3473	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
BAPAT_3474	COG5609	conserved protein (DUF2294)
BAPAT_3475	COG2427	Protein of unknown function (DUF1641)
BAPAT_3476	COG3383	formate dehydrogenase (NAD+) activity
BAPAT_3477	COG3383	formate dehydrogenase (NAD+) activity
BAPAT_3478	COG0697	spore germination
BAPAT_3486	COG2226	methyltransferase
BAPAT_3487	COG4166	transmembrane transport
BAPAT_3488	COG4166	transmembrane transport
BAPAT_3489	COG1301	dicarboxylic acid transport
BAPAT_3490	COG1316	TRANSCRIPTIONal
BAPAT_3492	COG1595	DNA-templated transcription, initiation
BAPAT_3497	COG1131	(ABC) transporter
BAPAT_3499	COG0673	inositol 2-dehydrogenase activity
BAPAT_3500	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BAPAT_3501	COG0187	DNA topoisomerase II activity
BAPAT_3502	COG1832	CoA-binding protein
BAPAT_3503	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BAPAT_3504	COG0745	RESPONSE REGULATOR receiver
BAPAT_3507	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
BAPAT_3508	COG4841	protein insertion into membrane
BAPAT_3509	COG0824	Thioesterase
BAPAT_3515	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BAPAT_3517	COG2274	protein secretion by the type I secretion system
BAPAT_3518	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
BAPAT_3520	COG0726	polysaccharide deacetylase
BAPAT_3523	COG2211	Major facilitator Superfamily
BAPAT_3525	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
BAPAT_3528	COG0183	Belongs to the thiolase family
BAPAT_3529	COG0318	PFAM AMP-dependent synthetase and ligase
BAPAT_3530	COG1268	BioY protein
BAPAT_3531	COG0318	PFAM AMP-dependent synthetase and ligase
BAPAT_3540	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BAPAT_3542	COG5002	protein histidine kinase activity
BAPAT_3543	COG0400	carboxylic ester hydrolase activity
BAPAT_3544	COG0346	lactoylglutathione lyase activity
BAPAT_3545	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BAPAT_3546	COG0069	glutamate synthase activity
BAPAT_3547	COG1902	pentaerythritol trinitrate reductase activity
BAPAT_3548	COG1329	Transcriptional regulator
BAPAT_3549	COG0010	Belongs to the arginase family
BAPAT_3554	COG2226	methyltransferase
BAPAT_3565	COG4846	Membrane protein involved in cytochrome C biogenesis
BAPAT_3566	COG0785	Cytochrome C biogenesis protein
BAPAT_3568	COG0583	DNA-binding transcription factor activity
BAPAT_3569	COG1380	Effector of murein hydrolase LrgA
BAPAT_3570	COG1346	cytolysis
BAPAT_3574	COG0730	response to heat
BAPAT_3575	COG0730	response to heat
BAPAT_3577	COG3409	Peptidoglycan-binding domain 1 protein
BAPAT_3577	COG5632	N-Acetylmuramoyl-L-alanine amidase
BAPAT_3580	COG1132	(ABC) transporter
BAPAT_3581	COG1132	(ABC) transporter
BAPAT_3588	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
BAPAT_3591	COG0737	Belongs to the 5'-nucleotidase family
BAPAT_3593	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
BAPAT_3597	COG1695	Transcriptional regulator
BAPAT_3607	COG1388	LysM domain
BAPAT_3607	COG3409	Peptidoglycan-binding domain 1 protein
BAPAT_3607	COG5632	N-Acetylmuramoyl-L-alanine amidase
BAPAT_3608	COG4824	toxin secretion phage lysis holin
BAPAT_3636	COG1595	DNA-templated transcription, initiation
BAPAT_3646	COG1351	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NAD(P)H and FADH(2) as the reductant
BAPAT_3667	COG0174	glutamine synthetase
BAPAT_3668	COG0789	Transcriptional regulator
BAPAT_3669	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
BAPAT_3670	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BAPAT_3671	COG2860	membrane
BAPAT_3673	COG0464	growth
BAPAT_3679	COG1388	LysM domain
BAPAT_3679	COG3584	3D domain protein
BAPAT_3680	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BAPAT_3680	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BAPAT_3680	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BAPAT_3681	COG1105	Belongs to the carbohydrate kinase PfkB family
BAPAT_3682	COG1349	DNA-binding transcription factor activity
BAPAT_3683	COG1979	alcohol dehydrogenase
BAPAT_3684	COG1979	alcohol dehydrogenase
BAPAT_3685	COG2322	membrane
BAPAT_3688	COG1113	amino acid transport
BAPAT_3691	COG1408	metallophosphoesterase
BAPAT_3692	COG2116	formate transmembrane transporter activity
BAPAT_3694	COG2217	Heavy metal translocating P-type atpase
BAPAT_3695	COG2608	mercury ion transmembrane transporter activity
BAPAT_3696	COG1937	Protein conserved in bacteria
BAPAT_3698	COG2819	hydrolase of the alpha beta superfamily
BAPAT_3699	COG1120	ATPase activity
BAPAT_3700	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAPAT_3701	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAPAT_3702	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BAPAT_3706	COG2169	Transcriptional regulator
BAPAT_3707	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BAPAT_3708	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
BAPAT_3710	COG2364	Membrane
BAPAT_3713	COG2267	carboxylic ester hydrolase activity
BAPAT_3714	COG0346	lactoylglutathione lyase activity
BAPAT_3715	COG5001	Diguanylate cyclase
BAPAT_3715	COG3300	MHYT domain
BAPAT_3721	COG1346	cytolysis
BAPAT_3722	COG1380	Effector of murein hydrolase LrgA
BAPAT_3723	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BAPAT_3724	COG0508	dehydrogenase complex catalyzes the overall conversion of
BAPAT_3724	COG0596	Alpha beta hydrolase
BAPAT_3725	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
BAPAT_3728	COG1404	Belongs to the peptidase S8 family
BAPAT_3729	COG3773	Cell wall hydrolase
BAPAT_3730	COG0562	UDP-galactopyranose mutase
BAPAT_3731	COG1368	sulfuric ester hydrolase activity
BAPAT_3732	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
BAPAT_3734	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
BAPAT_3743	COG4550	Control of competence regulator ComK, YlbF/YmcA
BAPAT_3744	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
BAPAT_3745	COG1013	pyruvate-flavodoxin oxidoreductase activity
BAPAT_3746	COG0674	pyruvate-flavodoxin oxidoreductase activity
BAPAT_3746	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
BAPAT_3748	COG2359	stage V sporulation protein S
BAPAT_3749	COG1692	metallophosphoesterase
BAPAT_3754	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BAPAT_3755	COG1426	Protein conserved in bacteria
BAPAT_3758	COG0300	oxidoreductase activity
BAPAT_3759	COG0612	Peptidase, M16
BAPAT_3760	COG0612	Peptidase, M16
BAPAT_3766	COG2188	Transcriptional regulator
BAPAT_3767	COG1674	ftsk spoiiie
BAPAT_3769	COG0740	serine-type endopeptidase activity
BAPAT_3770	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BAPAT_3772	COG0527	aspartate kinase activity
BAPAT_3773	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BAPAT_3774	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BAPAT_3775	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BAPAT_3776	COG1873	PFAM PRC-barrel domain
BAPAT_3777	COG0612	Peptidase, M16
BAPAT_3778	COG0726	polysaccharide deacetylase
BAPAT_3780	COG0196	riboflavin kinase activity
BAPAT_3781	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
BAPAT_3783	COG1550	Protein conserved in bacteria
BAPAT_3785	COG1358	cellular component organization or biogenesis
BAPAT_3786	COG2740	Nucleic-acid-binding protein implicated in transcription termination
BAPAT_3787	COG0195	Participates in both transcription termination and antitermination
BAPAT_3791	COG0750	zinc metalloprotease
BAPAT_3792	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
BAPAT_3793	COG4589	Belongs to the CDS family
BAPAT_3796	COG0528	UMP kinase activity
BAPAT_3802	COG4974	Belongs to the 'phage' integrase family
BAPAT_3804	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BAPAT_3807	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
BAPAT_3815	COG1837	Belongs to the UPF0109 family
BAPAT_3817	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
BAPAT_3819	COG0552	protein localization to endoplasmic reticulum
BAPAT_3820	COG1196	nuclear chromosome segregation
BAPAT_3823	COG1028	Short-chain dehydrogenase reductase Sdr
BAPAT_3824	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
BAPAT_3827	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
BAPAT_3828	COG1461	Dihydroxyacetone kinase
BAPAT_3829	COG1302	Protein conserved in bacteria
BAPAT_3831	COG1564	THIamine pyrophosphokinase
BAPAT_3832	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
BAPAT_3833	COG1162	GTPase activity
BAPAT_3834	COG2815	serine threonine protein kinase
BAPAT_3834	COG0515	serine threonine protein kinase
BAPAT_3835	COG0631	protein serine/threonine phosphatase activity
BAPAT_3837	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
BAPAT_3837	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
BAPAT_3839	COG0242	peptide deformylase activity
BAPAT_3840	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
BAPAT_3841	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BAPAT_3843	COG0194	GDP metabolic process
BAPAT_3845	COG1561	YicC-like family, N-terminal region
BAPAT_3846	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
BAPAT_3848	COG0006	proline dipeptidase activity
BAPAT_3853	COG3069	C4-dicarboxylate transmembrane transporter activity
BAPAT_3861	COG0505	Belongs to the CarA family
BAPAT_3866	COG0564	pseudouridine synthase activity
BAPAT_3869	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
BAPAT_3870	COG3599	regulation of cell shape
BAPAT_3871	COG2302	S4 RNA-binding domain
BAPAT_3872	COG0762	integral membrane protein
BAPAT_3874	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
BAPAT_3876	COG1873	PFAM PRC-barrel domain
BAPAT_3877	COG1191	sigma factor activity
BAPAT_3878	COG1191	sigma factor activity
BAPAT_3880	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
BAPAT_3881	COG0849	cell division
BAPAT_3882	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
BAPAT_3883	COG0812	UDP-N-acetylmuramate dehydrogenase activity
BAPAT_3884	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
BAPAT_3885	COG0772	Belongs to the SEDS family
BAPAT_3888	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BAPAT_3889	COG0768	penicillin binding
BAPAT_3891	COG4839	cell division protein FtsL
BAPAT_3894	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BAPAT_3898	COG1399	metal-binding, possibly nucleic acid-binding protein
BAPAT_3909	COG4824	toxin secretion phage lysis holin
BAPAT_3928	COG4626	Terminase
BAPAT_3928	COG1802	Transcriptional regulator
BAPAT_3933	COG0582	viral genome integration into host DNA
BAPAT_3952	COG1484	DNA-dependent DNA replication
BAPAT_3957	COG1396	sequence-specific DNA binding
BAPAT_3964	COG0582	viral genome integration into host DNA
BAPAT_3966	COG3480	Lon protease (S16) C-terminal proteolytic domain
BAPAT_3967	COG1752	Esterase of the alpha-beta hydrolase superfamily
BAPAT_3968	COG3314	Sporulation integral membrane protein YlbJ
BAPAT_3970	COG0742	ribosomal rna small subunit methyltransferase
BAPAT_3974	COG3679	Belongs to the UPF0342 family
BAPAT_3975	COG0406	alpha-ribazole phosphatase activity
BAPAT_3978	COG2340	Cysteine-rich secretory protein family
BAPAT_3981	COG3336	cytochrome c oxidase
BAPAT_3988	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
BAPAT_3989	COG0772	Belongs to the SEDS family
BAPAT_3990	COG4838	Belongs to the UPF0358 family
BAPAT_3991	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
BAPAT_3992	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
BAPAT_3994	COG4896	Protein conserved in bacteria
BAPAT_3999	COG0483	inositol monophosphate 1-phosphatase activity
BAPAT_4003	COG1982	Orn Lys Arg decarboxylase major
BAPAT_4012	COG0022	dehydrogenase e1 component
BAPAT_4013	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
BAPAT_4015	COG0242	peptide deformylase activity
BAPAT_4016	COG0561	phosphatase activity
BAPAT_4018	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BAPAT_4019	COG0569	domain protein
BAPAT_4023	COG0583	DNA-binding transcription factor activity
BAPAT_4024	COG0517	IMP dehydrogenase activity
BAPAT_4026	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
BAPAT_4028	COG4703	Protein of unknown function (DUF1797)
BAPAT_4031	COG2200	EAL domain
BAPAT_4032	COG1028	Short-chain dehydrogenase reductase Sdr
BAPAT_4033	COG1408	metallophosphoesterase
BAPAT_4044	COG2814	Major facilitator Superfamily
BAPAT_4048	COG3209	COG3209 Rhs family protein
BAPAT_4050	COG2205	protein histidine kinase activity
BAPAT_4052	COG0436	Aminotransferase
BAPAT_4053	COG1609	Transcriptional regulator
BAPAT_4054	COG3833	ABC-type maltose transport systems, permease component
BAPAT_4055	COG1175	transmembrane transport
BAPAT_4056	COG2182	Extracellular solute-binding protein
BAPAT_4058	COG0366	Alpha amylase catalytic
BAPAT_4059	COG3842	ATPase activity
BAPAT_4066	COG0183	Belongs to the thiolase family
BAPAT_4073	COG1695	Transcriptional regulator
BAPAT_4074	COG1028	Short-chain dehydrogenase reductase Sdr
BAPAT_4078	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BAPAT_4079	COG0436	Aminotransferase
BAPAT_4083	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
BAPAT_4086	COG2084	Dehydrogenase
BAPAT_4087	COG2084	Dehydrogenase
BAPAT_4088	COG3706	GGDEF domain
BAPAT_4089	COG0778	Nitroreductase
BAPAT_4094	COG1263	PTS System
BAPAT_4094	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BAPAT_4094	COG2190	(PTS) system
BAPAT_4095	COG3711	transcriptional antiterminator
BAPAT_4099	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
BAPAT_4103	COG1547	Domain of unknown function (DUF309)
BAPAT_4104	COG0456	acetyltransferase
BAPAT_4106	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BAPAT_4107	COG4086	secreted protein
BAPAT_4108	COG0561	phosphatase activity
BAPAT_4109	COG0697	spore germination
BAPAT_4112	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BAPAT_4117	COG0733	neurotransmitter:sodium symporter activity
BAPAT_4121	COG1686	Belongs to the peptidase S11 family
BAPAT_4122	COG1725	Transcriptional regulator
BAPAT_4123	COG1131	(ABC) transporter
BAPAT_4127	COG1846	Transcriptional regulator
BAPAT_4130	COG0598	Magnesium transport protein CorA
BAPAT_4135	COG4974	Belongs to the 'phage' integrase family
BAPAT_4137	COG0735	belongs to the Fur family
BAPAT_4138	COG1300	Membrane
BAPAT_4143	COG0667	Aldo Keto reductase
BAPAT_4144	COG0656	L-ascorbic acid biosynthetic process
BAPAT_4145	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
BAPAT_4145	COG0456	acetyltransferase
BAPAT_4147	COG1525	nuclease
BAPAT_4147	COG4085	toxin activity
BAPAT_4147	COG0737	Belongs to the 5'-nucleotidase family
BAPAT_4149	COG0596	Alpha beta hydrolase
BAPAT_4150	COG2056	Na+-H+ antiporter family
BAPAT_4151	COG1609	Transcriptional regulator
BAPAT_4152	COG0456	acetyltransferase
BAPAT_4153	COG1073	alpha beta
BAPAT_4156	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BAPAT_4156	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BAPAT_4157	COG0307	riboflavin synthase, alpha
BAPAT_4161	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
BAPAT_4162	COG4106	trans-aconitate 2-methyltransferase activity
BAPAT_4163	COG1073	alpha beta
BAPAT_4163	COG2226	methyltransferase
BAPAT_4164	COG0156	8-amino-7-oxononanoate synthase activity
BAPAT_4166	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BAPAT_4170	COG0737	Belongs to the 5'-nucleotidase family
BAPAT_4172	COG1522	sequence-specific DNA binding
BAPAT_4176	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BAPAT_4178	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
BAPAT_4181	COG0300	oxidoreductase activity
BAPAT_4182	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BAPAT_4183	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BAPAT_4184	COG1760	l-serine dehydratase
BAPAT_4185	COG1760	l-serine dehydratase
BAPAT_4189	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BAPAT_4190	COG2195	Cleaves the N-terminal amino acid of tripeptides
BAPAT_4191	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BAPAT_4193	COG1376	ErfK ybiS ycfS ynhG family protein
BAPAT_4194	COG4129	membrane
BAPAT_4195	COG1126	abc transporter atp-binding protein
BAPAT_4196	COG0765	amino acid transport
BAPAT_4197	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BAPAT_4201	COG2816	NAD+ diphosphatase activity
BAPAT_4202	COG0772	Belongs to the SEDS family
BAPAT_4203	COG0508	dehydrogenase complex catalyzes the overall conversion of
BAPAT_4204	COG0022	dehydrogenase e1 component
BAPAT_4205	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
BAPAT_4206	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BAPAT_4208	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
BAPAT_4209	COG0280	phosphate acetyltransferase
BAPAT_4210	COG3290	protein histidine kinase activity
BAPAT_4210	COG3829	transcription factor binding
BAPAT_4212	COG0584	glycerophosphoryl diester phosphodiesterase
BAPAT_4213	COG3093	addiction module antidote protein HigA
BAPAT_4215	COG0745	RESPONSE REGULATOR receiver
BAPAT_4216	COG0750	zinc metalloprotease
BAPAT_4217	COG0497	DNA recombination
BAPAT_4219	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
BAPAT_4221	COG0142	geranyltranstransferase activity
BAPAT_4226	COG1302	Protein conserved in bacteria
BAPAT_4227	COG0439	Biotin carboxylase
BAPAT_4228	COG0511	ligase activity, forming carbon-carbon bonds
BAPAT_4236	COG3854	ATPases associated with a variety of cellular activities
BAPAT_4240	COG0006	proline dipeptidase activity
BAPAT_4243	COG3872	metal-dependent enzyme
BAPAT_4245	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BAPAT_4250	COG0095	Lipoate-protein ligase
BAPAT_4251	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BAPAT_4252	COG1609	Transcriptional regulator
BAPAT_4254	COG2076	Multidrug Resistance protein
BAPAT_4255	COG2076	Multidrug Resistance protein
BAPAT_4262	COG1131	(ABC) transporter
BAPAT_4263	COG1725	Transcriptional regulator
BAPAT_4269	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
BAPAT_4281	COG4970	Tfp pilus assembly protein FimT
BAPAT_4282	COG4537	Required for transformation and DNA binding
BAPAT_4283	COG1459	type II secretion system
BAPAT_4284	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BAPAT_4294	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
BAPAT_4297	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
BAPAT_4297	COG0646	methionine synthase
BAPAT_4298	COG0626	cystathionine gamma-synthase activity
BAPAT_4299	COG0626	cystathionine gamma-synthase activity
BAPAT_4303	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BAPAT_4305	COG1940	carbohydrate kinase activity
BAPAT_4306	COG4483	Protein conserved in bacteria
BAPAT_4307	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
BAPAT_4308	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
BAPAT_4309	COG0704	Plays a role in the regulation of phosphate uptake
BAPAT_4310	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
BAPAT_4311	COG0581	inorganic phosphate transmembrane transporter activity
BAPAT_4312	COG0573	inorganic phosphate transmembrane transporter activity
BAPAT_4313	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
BAPAT_4315	COG0477	Major facilitator Superfamily
BAPAT_4316	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
BAPAT_4320	COG0735	belongs to the Fur family
BAPAT_4321	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BAPAT_4322	COG1121	(ABC) transporter
BAPAT_4323	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BAPAT_4330	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
BAPAT_4331	COG2384	SAM-dependent methyltransferase
BAPAT_4332	COG2010	Cytochrome c
BAPAT_4333	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BAPAT_4334	COG0358	DNA primase activity
BAPAT_4337	COG0517	IMP dehydrogenase activity
BAPAT_4340	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
BAPAT_4341	COG0295	cytidine deaminase activity
BAPAT_4342	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
BAPAT_4344	COG1480	7TM receptor with intracellular HD hydrolase
BAPAT_4345	COG1702	phosphate starvation-inducible protein PhoH
BAPAT_4348	COG1610	YqeY-like protein
BAPAT_4350	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
BAPAT_4351	COG1385	rRNA (uridine-N3-)-methyltransferase activity
BAPAT_4355	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
BAPAT_4357	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BAPAT_4358	COG1733	regulation of RNA biosynthetic process
BAPAT_4363	COG1466	dna polymerase III delta subunit
BAPAT_4367	COG0658	competence protein
BAPAT_4367	COG2333	competence protein COMEC
BAPAT_4368	COG2131	deaminase
BAPAT_4369	COG1596	polysaccharide export
BAPAT_4369	COG1555	photosystem II stabilization
BAPAT_4370	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BAPAT_4371	COG2226	methyltransferase
BAPAT_4372	COG0799	negative regulation of ribosome biogenesis
BAPAT_4373	COG1713	HD superfamily hydrolase involved in NAD metabolism
BAPAT_4375	COG1534	Rna-binding protein
BAPAT_4377	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
BAPAT_4378	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
BAPAT_4381	COG1191	sigma factor activity
BAPAT_4383	COG1595	DNA-templated transcription, initiation
BAPAT_4385	COG0778	Nitroreductase
BAPAT_4387	COG2357	RelA SpoT domain protein
BAPAT_4389	COG1785	Belongs to the alkaline phosphatase family
BAPAT_4392	COG2267	carboxylic ester hydrolase activity
BAPAT_4399	COG1404	Belongs to the peptidase S8 family
BAPAT_4401	COG3186	Phenylalanine-4-hydroxylase
BAPAT_4403	COG2514	catechol 2,3-dioxygenase activity
BAPAT_4404	COG2259	Doxx family
BAPAT_4412	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BAPAT_4414	COG1454	alcohol dehydrogenase
BAPAT_4414	COG1012	belongs to the aldehyde dehydrogenase family
BAPAT_4415	COG0626	cystathionine gamma-synthase activity
BAPAT_4416	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
BAPAT_4421	COG0768	penicillin binding
BAPAT_4427	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
BAPAT_4431	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
BAPAT_4433	COG0628	permease
BAPAT_4437	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
BAPAT_4439	COG0482	sulfurtransferase activity
BAPAT_4440	COG1104	cysteine desulfurase activity
BAPAT_4441	COG1959	2 iron, 2 sulfur cluster binding
BAPAT_4442	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
BAPAT_4444	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
BAPAT_4446	COG0124	histidyl-tRNA synthetase
BAPAT_4449	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BAPAT_4451	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
BAPAT_4451	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
BAPAT_4452	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
BAPAT_4453	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BAPAT_4453	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BAPAT_4455	COG2244	polysaccharide biosynthetic process
BAPAT_4456	COG2323	membrane
BAPAT_4458	COG1862	Preprotein translocase
BAPAT_4464	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
BAPAT_4466	COG0697	spore germination
BAPAT_4467	COG0697	spore germination
BAPAT_4468	COG0640	Transcriptional regulator
BAPAT_4473	COG0157	Belongs to the NadC ModD family
BAPAT_4474	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
BAPAT_4475	COG1104	cysteine desulfurase activity
BAPAT_4476	COG1827	regulation of RNA biosynthetic process
BAPAT_4477	COG2258	MOSC domain
BAPAT_4478	COG0077	Prephenate dehydratase
BAPAT_4480	COG0577	efflux transmembrane transporter activity
BAPAT_4481	COG0577	efflux transmembrane transporter activity
BAPAT_4482	COG1136	(ABC) transporter
BAPAT_4483	COG5002	protein histidine kinase activity
BAPAT_4485	COG0745	RESPONSE REGULATOR receiver
BAPAT_4486	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
BAPAT_4487	COG3290	protein histidine kinase activity
BAPAT_4489	COG2868	ribosomal protein
BAPAT_4491	COG1530	ribonuclease E activity
BAPAT_4492	COG1994	Peptidase M50
BAPAT_4493	COG0739	heme binding
BAPAT_4494	COG2894	cell division
BAPAT_4497	COG1792	Involved in formation and maintenance of cell shape
BAPAT_4498	COG1077	Cell shape determining protein MreB Mrl
BAPAT_4502	COG0285	dihydrofolate synthase activity
BAPAT_4503	COG0525	valine-tRNA ligase activity
BAPAT_4505	COG1388	LysM domain
BAPAT_4507	COG0113	porphobilinogen synthase activity
BAPAT_4508	COG1587	Uroporphyrinogen-III synthase
BAPAT_4510	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BAPAT_4512	COG1846	Transcriptional regulator
BAPAT_4513	COG1764	response to oxidative stress
BAPAT_4516	COG1067	ATP-dependent peptidase activity
BAPAT_4516	COG0470	DNA polymerase III
BAPAT_4523	COG0622	Phosphoesterase
BAPAT_4526	COG5401	PFAM Sporulation and spore germination
BAPAT_4531	COG1309	transcriptional regulator
BAPAT_4534	COG2197	response regulator
BAPAT_4535	COG2233	PERMEase
BAPAT_4537	COG0402	S-adenosylhomocysteine deaminase activity
BAPAT_4538	COG0402	S-adenosylhomocysteine deaminase activity
BAPAT_4542	COG0444	Belongs to the ABC transporter superfamily
BAPAT_4543	COG4608	Belongs to the ABC transporter superfamily
BAPAT_4544	COG3275	phosphorelay sensor kinase activity
BAPAT_4545	COG3279	Response regulator of the LytR AlgR family
BAPAT_4549	COG1396	sequence-specific DNA binding
BAPAT_4550	COG0697	spore germination
BAPAT_4552	COG1959	2 iron, 2 sulfur cluster binding
BAPAT_4553	COG1668	transmembrane transport
BAPAT_4554	COG4152	abc transporter atp-binding protein
BAPAT_4555	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
BAPAT_4556	COG1360	Flagellar Motor Protein
BAPAT_4557	COG1360	Flagellar Motor Protein
BAPAT_4558	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
BAPAT_4559	COG1876	peptidase activity
BAPAT_4560	COG0824	Thioesterase
BAPAT_4561	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
BAPAT_4562	COG1053	succinate dehydrogenase
BAPAT_4563	COG2009	succinate dehydrogenase
BAPAT_4564	COG1719	4-vinyl reductase, 4VR
BAPAT_4566	COG3118	belongs to the thioredoxin family
BAPAT_4567	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
BAPAT_4568	COG2086	electron transfer activity
BAPAT_4569	COG1024	Enoyl-CoA hydratase
BAPAT_4570	COG1309	transcriptional regulator
BAPAT_4571	COG0318	PFAM AMP-dependent synthetase and ligase
BAPAT_4576	COG2318	DinB family
BAPAT_4581	COG1131	(ABC) transporter
BAPAT_4582	COG2205	protein histidine kinase activity
BAPAT_4583	COG0745	RESPONSE REGULATOR receiver
BAPAT_4585	COG4895	conserved protein (DUF2196)
BAPAT_4586	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
BAPAT_4589	COG4509	Sortase family
BAPAT_4590	COG1120	ATPase activity
BAPAT_4593	COG5386	Cell surface protein
BAPAT_4595	COG5386	Cell surface protein
BAPAT_4596	COG1114	Component of the transport system for branched-chain amino acids
BAPAT_4597	COG1187	pseudouridine synthase activity
BAPAT_4599	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
BAPAT_4599	COG1796	DNA polymerase
BAPAT_4600	COG1286	toxin biosynthetic process
BAPAT_4605	COG0017	Asparaginyl-tRNA synthetase
BAPAT_4606	COG0072	phenylalanine-tRNA ligase activity
BAPAT_4606	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BAPAT_4608	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BAPAT_4610	COG1418	mRNA catabolic process
BAPAT_4615	COG2814	Major facilitator Superfamily
BAPAT_4616	COG1566	PFAM secretion protein HlyD family protein
BAPAT_4617	COG1309	transcriptional regulator
BAPAT_4618	COG1363	Peptidase, m42
BAPAT_4622	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
BAPAT_4623	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
BAPAT_4625	COG1484	DNA-dependent DNA replication
BAPAT_4626	COG3611	Membrane attachment protein
BAPAT_4628	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
BAPAT_4629	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BAPAT_4630	COG0237	dephospho-CoA kinase activity
BAPAT_4631	COG1971	Probably functions as a manganese efflux pump
BAPAT_4632	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
BAPAT_4633	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BAPAT_4633	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BAPAT_4634	COG5002	protein histidine kinase activity
BAPAT_4635	COG0745	RESPONSE REGULATOR receiver
BAPAT_4639	COG0538	isocitrate dehydrogenase activity
BAPAT_4640	COG0372	Belongs to the citrate synthase family
BAPAT_4642	COG0628	permease
BAPAT_4643	COG3030	protein affecting phage T7 exclusion by the F plasmid
BAPAT_4648	COG1725	Transcriptional regulator
BAPAT_4649	COG0281	malic enzyme
BAPAT_4650	COG0587	DNA-directed DNA polymerase activity
BAPAT_4653	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
BAPAT_4658	COG4109	DRTGG domain
BAPAT_4661	COG0006	proline dipeptidase activity
BAPAT_4667	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BAPAT_4668	COG0662	Cupin 2, conserved barrel domain protein
BAPAT_4670	COG1476	TRANSCRIPTIONal
BAPAT_4673	COG1028	Short-chain dehydrogenase reductase Sdr
BAPAT_4674	COG0589	response to stress
BAPAT_4682	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BAPAT_4686	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BAPAT_4687	COG0827	DNA restriction-modification system
BAPAT_4688	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
BAPAT_4689	COG3874	Sporulation protein YtfJ
BAPAT_4691	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
BAPAT_4692	COG1574	metal-dependent hydrolase with the TIM-barrel fold
BAPAT_4694	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BAPAT_4697	COG1104	cysteine desulfurase activity
BAPAT_4700	COG0583	DNA-binding transcription factor activity
BAPAT_4701	COG0697	spore germination
BAPAT_4702	COG1309	transcriptional regulator
BAPAT_4703	COG1309	transcriptional regulator
BAPAT_4704	COG1956	GAF domain-containing protein
BAPAT_4705	COG0626	cystathionine gamma-synthase activity
BAPAT_4709	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
BAPAT_4711	COG1595	DNA-templated transcription, initiation
BAPAT_4713	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BAPAT_4714	COG0454	-acetyltransferase
BAPAT_4715	COG0517	IMP dehydrogenase activity
BAPAT_4716	COG0123	including yeast histone deacetylase and acetoin utilization protein
BAPAT_4718	COG0745	RESPONSE REGULATOR receiver
BAPAT_4720	COG0666	response to abiotic stimulus
BAPAT_4727	COG1609	Transcriptional regulator
BAPAT_4728	COG4851	CamS sex pheromone cAM373 precursor
BAPAT_4729	COG3118	belongs to the thioredoxin family
BAPAT_4731	COG2309	aminopeptidase activity
BAPAT_4734	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BAPAT_4737	COG1674	ftsk spoiiie
BAPAT_4739	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BAPAT_4740	COG4848	Belongs to the UPF0354 family
BAPAT_4741	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BAPAT_4742	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
BAPAT_4743	COG1363	Peptidase, m42
BAPAT_4745	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BAPAT_4748	COG0510	thiamine kinase activity
BAPAT_4749	COG1523	belongs to the glycosyl hydrolase 13 family
BAPAT_4751	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BAPAT_4752	COG1349	DNA-binding transcription factor activity
BAPAT_4753	COG1187	pseudouridine synthase activity
BAPAT_4754	COG2244	polysaccharide biosynthetic process
BAPAT_4755	COG2081	HI0933 family
BAPAT_4757	COG2814	Major facilitator Superfamily
BAPAT_4759	COG3832	glyoxalase III activity
BAPAT_4763	COG1329	Transcriptional regulator
BAPAT_4765	COG4975	Glucose uptake
BAPAT_4768	COG0314	molybdopterin synthase activity
BAPAT_4769	COG1763	Mo-molybdopterin cofactor biosynthetic process
BAPAT_4770	COG0303	'Molybdopterin
BAPAT_4772	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BAPAT_4773	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
BAPAT_4778	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BAPAT_4780	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
BAPAT_4791	COG2814	Major facilitator Superfamily
BAPAT_4792	COG0475	glutathione-regulated potassium exporter activity
BAPAT_4793	COG0490	domain, Protein
BAPAT_4794	COG0582	viral genome integration into host DNA
BAPAT_4796	COG1136	(ABC) transporter
BAPAT_4800	COG1242	4 iron, 4 sulfur cluster binding
BAPAT_4801	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
BAPAT_4802	COG1131	(ABC) transporter
BAPAT_4804	COG1794	racemase activity, acting on amino acids and derivatives
BAPAT_4809	COG2267	carboxylic ester hydrolase activity
BAPAT_4810	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
BAPAT_4811	COG0671	phosphoesterase, PA-phosphatase related
BAPAT_4812	COG0438	transferase activity, transferring glycosyl groups
BAPAT_4814	COG0521	Mo-molybdopterin cofactor biosynthetic process
BAPAT_4822	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
BAPAT_4823	COG5002	protein histidine kinase activity
BAPAT_4824	COG4191	Histidine kinase
BAPAT_4825	COG2267	carboxylic ester hydrolase activity
BAPAT_4826	COG1368	sulfuric ester hydrolase activity
BAPAT_4830	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BAPAT_4831	COG1116	anion transmembrane transporter activity
BAPAT_4832	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BAPAT_4835	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
BAPAT_4837	COG0494	nUDIX hydrolase
BAPAT_4843	COG0288	reversible hydration of carbon dioxide
BAPAT_4844	COG1271	oxidase subunit
BAPAT_4845	COG1294	oxidase, subunit
BAPAT_4849	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BAPAT_4854	COG1842	Phage shock protein A
BAPAT_4860	COG5002	protein histidine kinase activity
BAPAT_4861	COG0745	RESPONSE REGULATOR receiver
BAPAT_4867	COG1597	lipid kinase activity
BAPAT_4873	COG0586	Pfam SNARE associated Golgi protein
BAPAT_4875	COG0577	efflux transmembrane transporter activity
BAPAT_4876	COG1136	(ABC) transporter
BAPAT_4877	COG3708	Transcriptional regulator
BAPAT_4877	COG2207	Transcriptional regulator
BAPAT_4878	COG0745	RESPONSE REGULATOR receiver
BAPAT_4879	COG2205	protein histidine kinase activity
BAPAT_4881	COG0577	efflux transmembrane transporter activity
BAPAT_4882	COG0577	efflux transmembrane transporter activity
BAPAT_4883	COG1136	(ABC) transporter
BAPAT_4884	COG0577	efflux transmembrane transporter activity
BAPAT_4885	COG0577	efflux transmembrane transporter activity
BAPAT_4892	COG3964	amidohydrolase
BAPAT_4899	COG4948	Mandelate Racemase Muconate Lactonizing
BAPAT_4901	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
BAPAT_4902	COG0596	Alpha beta hydrolase
BAPAT_4903	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
BAPAT_4904	COG1169	isochorismate synthase
BAPAT_4905	COG1575	Belongs to the MenA family. Type 1 subfamily
BAPAT_4906	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
BAPAT_4907	COG1278	Cold shock
BAPAT_4910	COG0058	SHG alpha-glucan phosphorylase activity
BAPAT_4911	COG0297	glycogen (starch) synthase activity
BAPAT_4912	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
BAPAT_4913	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
BAPAT_4915	COG0039	L-malate dehydrogenase activity
BAPAT_4917	COG1285	pathogenesis
BAPAT_4918	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
BAPAT_4920	COG0166	Belongs to the GPI family
BAPAT_4921	COG2155	Conserved Protein
BAPAT_4922	COG1098	S1 RNA binding domain
BAPAT_4923	COG0436	Aminotransferase
BAPAT_4924	COG1522	sequence-specific DNA binding
BAPAT_4925	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BAPAT_4926	COG2267	carboxylic ester hydrolase activity
BAPAT_4928	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
BAPAT_4932	COG5018	Exonuclease
BAPAT_4933	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
BAPAT_4937	COG0423	glycine-tRNA ligase activity
BAPAT_4938	COG2050	protein possibly involved in aromatic compounds catabolism
BAPAT_4940	COG1268	BioY protein
BAPAT_4942	COG1210	Utp--glucose-1-phosphate uridylyltransferase
BAPAT_4943	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BAPAT_4946	COG3584	3D domain protein
BAPAT_4949	COG1252	NADH dehydrogenase
BAPAT_4952	COG3708	Transcriptional regulator
BAPAT_4955	COG1683	Conserved Protein
BAPAT_4959	COG0316	Belongs to the HesB IscA family
BAPAT_4962	COG1252	NADH dehydrogenase
BAPAT_4964	COG2274	protein secretion by the type I secretion system
BAPAT_4965	COG0390	transport system, permease component
BAPAT_4966	COG2824	Alkylphosphonate utilization operon protein PhnA
BAPAT_4974	COG4837	Protein of unknown function (DUF1462)
BAPAT_4975	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
BAPAT_4977	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
BAPAT_4978	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
BAPAT_4980	COG2249	NAD(P)H dehydrogenase (quinone) activity
BAPAT_4981	COG0647	UMP catabolic process
BAPAT_4983	COG2445	Protein of unknown function DUF86
BAPAT_4984	COG1494	fructose-1,6-bisphosphatase
BAPAT_4987	COG4470	Protein conserved in bacteria
BAPAT_4989	COG0789	Transcriptional regulator
BAPAT_4990	COG4377	Putative membrane peptidase family (DUF2324)
BAPAT_4995	COG0739	heme binding
BAPAT_4997	COG3377	Domain of unknown function (DUF1805)
BAPAT_4998	COG0737	Belongs to the 5'-nucleotidase family
BAPAT_5000	COG1695	Transcriptional regulator
BAPAT_5002	COG0719	Fe-S assembly protein
BAPAT_5003	COG0822	iron-sulfur transferase activity
BAPAT_5004	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BAPAT_5005	COG0719	Fe-S assembly protein
BAPAT_5006	COG0396	ATPase activity
BAPAT_5007	COG1464	Belongs to the NlpA lipoprotein family
BAPAT_5008	COG1464	Belongs to the NlpA lipoprotein family
BAPAT_5009	COG2011	ABC-type metal ion transport system permease component
BAPAT_5010	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BAPAT_5013	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BAPAT_5014	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
BAPAT_5016	COG1393	Belongs to the ArsC family
BAPAT_5024	COG0039	L-malate dehydrogenase activity
BAPAT_5028	COG1309	transcriptional regulator
BAPAT_5029	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BAPAT_5030	COG1960	acyl-CoA dehydrogenase activity
BAPAT_5032	COG0183	Belongs to the thiolase family
BAPAT_5033	COG1024	Enoyl-CoA hydratase
BAPAT_5033	COG1250	3-hydroxyacyl-CoA dehydrogenase
BAPAT_5035	COG1686	Belongs to the peptidase S11 family
BAPAT_5038	COG0011	TIGRFAM Protein of
BAPAT_5039	COG0840	transmembrane signaling receptor activity
BAPAT_5043	COG2814	Major facilitator Superfamily
BAPAT_5044	COG0531	amino acid
BAPAT_5046	COG0706	membrane insertase activity
BAPAT_5048	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BAPAT_5055	COG0586	Pfam SNARE associated Golgi protein
BAPAT_5057	COG1376	ErfK ybiS ycfS ynhG family protein
BAPAT_5058	COG0745	RESPONSE REGULATOR receiver
BAPAT_5059	COG5002	protein histidine kinase activity
BAPAT_5061	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BAPAT_5064	COG2151	metal-sulfur cluster biosynthetic enzyme
BAPAT_5065	COG3227	Zinc metalloprotease (Elastase)
BAPAT_5066	COG1741	Belongs to the pirin family
BAPAT_5069	COG0475	glutathione-regulated potassium exporter activity
BAPAT_5070	COG0490	domain, Protein
BAPAT_5071	COG1115	amino acid carrier protein
BAPAT_5072	COG0783	Belongs to the Dps family
BAPAT_5076	COG1611	Belongs to the LOG family
BAPAT_5079	COG2311	Membrane
BAPAT_5081	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BAPAT_5082	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BAPAT_5083	COG1115	amino acid carrier protein
BAPAT_5084	COG1115	amino acid carrier protein
BAPAT_5085	COG2910	NAD(P)H-binding
BAPAT_5090	COG0656	L-ascorbic acid biosynthetic process
BAPAT_5091	COG2814	Major facilitator Superfamily
BAPAT_5092	COG1733	regulation of RNA biosynthetic process
BAPAT_5094	COG1252	NADH dehydrogenase
BAPAT_5095	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
BAPAT_5096	COG0812	UDP-N-acetylmuramate dehydrogenase activity
BAPAT_5098	COG0840	transmembrane signaling receptor activity
BAPAT_5098	COG3290	protein histidine kinase activity
BAPAT_5100	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BAPAT_5101	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BAPAT_5104	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BAPAT_5105	COG3223	Belongs to the PsiE family
BAPAT_5115	COG0557	exoribonuclease II activity
BAPAT_5116	COG1647	Serine aminopeptidase, S33
BAPAT_5117	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BAPAT_5118	COG1346	cytolysis
BAPAT_5138	COG4695	Portal protein
BAPAT_5142	COG4974	Belongs to the 'phage' integrase family
BAPAT_5145	COG0149	triose-phosphate isomerase activity
BAPAT_5147	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BAPAT_5150	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
BAPAT_5154	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BAPAT_5157	COG2323	membrane
BAPAT_5158	COG0740	serine-type endopeptidase activity
BAPAT_5159	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BAPAT_5161	COG0391	Required for morphogenesis under gluconeogenic growth conditions
BAPAT_5163	COG1051	belongs to the nudix hydrolase family
BAPAT_5165	COG0492	ferredoxin-NADP+ reductase activity
BAPAT_5166	COG0457	Tetratricopeptide repeat
BAPAT_5167	COG0110	maltose O-acetyltransferase activity
BAPAT_5171	COG1950	PFAM Membrane protein of
BAPAT_5173	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
BAPAT_5174	COG0556	nucleotide-excision repair
BAPAT_5178	COG0789	Transcriptional regulator
BAPAT_5184	COG0583	DNA-binding transcription factor activity
BAPAT_5186	COG0655	NAD(P)H dehydrogenase (quinone) activity
BAPAT_5189	COG1132	(ABC) transporter
BAPAT_5190	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BAPAT_5191	COG3409	Peptidoglycan-binding domain 1 protein
BAPAT_5191	COG0793	Belongs to the peptidase S41A family
BAPAT_5192	COG2177	Part of the ABC transporter FtsEX involved in
BAPAT_5193	COG2884	Cell division ATP-binding protein ftsE
BAPAT_5198	COG0653	protein targeting
BAPAT_5199	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BAPAT_5201	COG1278	Cold shock
BAPAT_5202	COG1040	competence protein
BAPAT_5205	COG0791	NLP P60 protein
BAPAT_5205	COG1388	LysM domain
BAPAT_5206	COG1733	regulation of RNA biosynthetic process
BAPAT_5207	COG1307	EDD domain protein, DegV family
BAPAT_5208	COG1739	Uncharacterized protein family UPF0029
BAPAT_5209	COG1316	TRANSCRIPTIONal
BAPAT_5210	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
BAPAT_5211	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
BAPAT_5212	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BAPAT_5214	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
BAPAT_5214	COG3933	PFAM sigma-54 factor interaction domain-containing protein
BAPAT_5217	COG3394	polysaccharide catabolic process
BAPAT_5218	COG1486	melibiose metabolic process
BAPAT_5219	COG1447	Phosphotransferase system cellobiose-specific component IIA
BAPAT_5220	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BAPAT_5222	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
BAPAT_5223	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
BAPAT_5224	COG1447	Phosphotransferase system cellobiose-specific component IIA
BAPAT_5226	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BAPAT_5227	COG1301	dicarboxylic acid transport
BAPAT_5229	COG0346	lactoylglutathione lyase activity
BAPAT_5230	COG1511	domain protein
BAPAT_5231	COG0583	DNA-binding transcription factor activity
BAPAT_5232	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
BAPAT_5235	COG1271	oxidase subunit
BAPAT_5236	COG1294	oxidase, subunit
BAPAT_5237	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
BAPAT_5239	COG1620	l-lactate permease
BAPAT_5241	COG2389	metal-binding protein
BAPAT_5243	COG1368	sulfuric ester hydrolase activity
BAPAT_5247	COG0791	NLP P60 protein
BAPAT_5247	COG1388	LysM domain
BAPAT_5248	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BAPAT_5250	COG1215	transferase activity, transferring glycosyl groups
BAPAT_5253	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BAPAT_5254	COG3584	3D domain protein
BAPAT_5254	COG1388	LysM domain
BAPAT_5259	COG4715	Zinc finger, swim domain protein
BAPAT_5260	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
BAPAT_5266	COG1191	sigma factor activity
BAPAT_5268	COG0577	efflux transmembrane transporter activity
BAPAT_5269	COG1136	(ABC) transporter
BAPAT_5275	COG5002	protein histidine kinase activity
BAPAT_5276	COG0745	RESPONSE REGULATOR receiver
BAPAT_5277	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
BAPAT_5280	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
BAPAT_5281	COG1134	teichoic acid transport
BAPAT_5282	COG1682	transport, permease protein
BAPAT_5283	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
BAPAT_5292	COG1609	Transcriptional regulator
BAPAT_5295	COG0739	heme binding
BAPAT_5298	COG3279	Response regulator of the LytR AlgR family
BAPAT_5299	COG4555	ABC transporter
BAPAT_5300	COG2385	sporulation resulting in formation of a cellular spore
BAPAT_5301	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BAPAT_5303	COG4836	Membrane
BAPAT_5304	COG1007	ATP synthesis coupled electron transport
BAPAT_5305	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BAPAT_5306	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BAPAT_5308	COG0839	Belongs to the complex I subunit 6 family
BAPAT_5311	COG0649	NAD binding
BAPAT_5312	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BAPAT_5314	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BAPAT_5315	COG5001	Diguanylate cyclase
BAPAT_5315	COG3300	MHYT domain
BAPAT_5325	COG0356	it plays a direct role in the translocation of protons across the membrane
BAPAT_5332	COG0698	ribose 5-phosphate isomerase
BAPAT_5333	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BAPAT_5334	COG2190	(PTS) system
BAPAT_5335	COG2259	Doxx family
BAPAT_5336	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BAPAT_5339	COG0009	L-threonylcarbamoyladenylate synthase
BAPAT_5342	COG2890	protein-(glutamine-N5) methyltransferase activity
BAPAT_5343	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
BAPAT_5346	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
BAPAT_5347	COG1494	fructose-1,6-bisphosphatase
BAPAT_5348	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BAPAT_5351	COG4821	SIS domain
BAPAT_5353	COG3343	RNA polymerase activity
BAPAT_5355	COG1960	acyl-CoA dehydrogenase activity
BAPAT_5356	COG1960	acyl-CoA dehydrogenase activity
BAPAT_5357	COG1250	3-hydroxyacyl-CoA dehydrogenase
BAPAT_5358	COG0183	Belongs to the thiolase family
BAPAT_5359	COG2181	nitrate reductase activity
BAPAT_5359	COG0247	lactate metabolic process
BAPAT_5360	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BAPAT_5362	COG3300	MHYT domain
BAPAT_5362	COG5001	Diguanylate cyclase
BAPAT_5366	COG2197	response regulator
BAPAT_5367	COG4585	Histidine kinase
BAPAT_5368	COG0842	Transport permease protein
BAPAT_5369	COG1131	(ABC) transporter
BAPAT_5370	COG0024	Methionine aminopeptidase
BAPAT_5374	COG2234	aminopeptidase activity
BAPAT_5378	COG1595	DNA-templated transcription, initiation
BAPAT_5379	COG0018	arginyl-trna synthetase
BAPAT_5380	COG4506	Protein conserved in bacteria
BAPAT_5381	COG1619	proteins homologs of microcin C7 resistance protein MccF
BAPAT_5385	COG0010	Belongs to the arginase family
BAPAT_5386	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
BAPAT_5387	COG2814	Major facilitator Superfamily
BAPAT_5388	COG0789	Transcriptional regulator
BAPAT_5389	COG0584	glycerophosphoryl diester phosphodiesterase
BAPAT_5390	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BAPAT_5392	COG1994	Peptidase M50
BAPAT_5394	COG1078	dGTPase activity
BAPAT_5395	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BAPAT_5396	COG1120	ATPase activity
BAPAT_5397	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAPAT_5398	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAPAT_5402	COG0095	Lipoate-protein ligase
BAPAT_5403	COG0280	phosphate acetyltransferase
BAPAT_5406	COG3773	Cell wall hydrolase
BAPAT_5408	COG2363	Small membrane protein
BAPAT_5410	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
BAPAT_5411	COG2233	PERMEase
BAPAT_5412	COG0561	phosphatase activity
BAPAT_5413	COG2814	Major facilitator Superfamily
BAPAT_5415	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
BAPAT_5416	COG1131	(ABC) transporter
BAPAT_5417	COG2755	lipolytic protein G-D-S-L family
BAPAT_5418	COG1609	Transcriptional regulator
BAPAT_5420	COG0460	homoserine dehydrogenase
BAPAT_5424	COG1011	Hydrolase
BAPAT_5425	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BAPAT_5427	COG2197	response regulator
BAPAT_5428	COG2203	Gaf domain
BAPAT_5428	COG4585	Histidine kinase
BAPAT_5429	COG4585	Histidine kinase
BAPAT_5429	COG2203	Gaf domain
BAPAT_5430	COG0351	phosphomethylpyrimidine kinase
BAPAT_5431	COG3706	GGDEF domain
BAPAT_5432	COG2879	small protein
BAPAT_5433	COG1966	Carbon starvation protein
BAPAT_5434	COG3279	Response regulator of the LytR AlgR family
BAPAT_5435	COG0477	Major facilitator Superfamily
BAPAT_5441	COG0840	transmembrane signaling receptor activity
BAPAT_5442	COG0840	transmembrane signaling receptor activity
BAPAT_5444	COG1607	acyl-coa hydrolase
BAPAT_5447	COG0488	(ABC) transporter
BAPAT_5451	COG0463	Glycosyl transferase, family 2
BAPAT_5452	COG1309	transcriptional regulator
BAPAT_5453	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BAPAT_5454	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BAPAT_5454	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BAPAT_5455	COG0628	permease
BAPAT_5458	COG3279	Response regulator of the LytR AlgR family
BAPAT_5459	COG3275	phosphorelay sensor kinase activity
BAPAT_5460	COG2814	Major facilitator Superfamily
BAPAT_5461	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BAPAT_5462	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
BAPAT_5463	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
BAPAT_5467	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
BAPAT_5468	COG1272	protein, Hemolysin III
BAPAT_5473	COG1164	Oligoendopeptidase f
BAPAT_5477	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BAPAT_5478	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
BAPAT_5480	COG4863	YycH protein
BAPAT_5481	COG5002	protein histidine kinase activity
BAPAT_5482	COG0745	RESPONSE REGULATOR receiver
BAPAT_5484	COG0305	Participates in initiation and elongation during chromosome replication
BAPAT_5486	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
BAPAT_5487	COG4241	membrane
BAPAT_5489	COG0629	single-stranded DNA binding
BAPAT_5491	COG0012	GTP binding
BAPAT_5492	COG4481	Protein conserved in bacteria
BAPAT_5493	COG0668	transmembrane transport
BAPAT_5495	COG1475	DNA binding
BAPAT_5496	COG1192	Involved in chromosome partitioning
BAPAT_5500	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
BAPAT_5501	COG1847	R3H domain protein
BAPAT_5502	COG0706	membrane insertase activity
BAPAT_pXO10011	COG3344	reverse transcriptase
BAPAT_pXO10033	COG3344	reverse transcriptase
BAPAT_pXO10080	COG4962	Type ii secretion system protein e
BAPAT_pXO10112	COG2311	Membrane
BAPAT_pXO10118	COG4196	transglutaminase domain protein
BAPAT_pXO10119	COG0671	phosphoesterase, PA-phosphatase related
BAPAT_pXO10123	COG1210	Utp--glucose-1-phosphate uridylyltransferase
BAPAT_pXO10124	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
BAPAT_pXO10127	COG2801	Transposase and inactivated derivatives
BAPAT_pXO10173	COG2002	toxin-antitoxin pair type II binding
BAPAT_pXO10176	COG4974	Belongs to the 'phage' integrase family
BAPAT_pXO10186	COG2801	Transposase and inactivated derivatives
BAPAT_pXO10187	COG2801	Transposase and inactivated derivatives
BAPAT_pXO10190	COG2801	Transposase and inactivated derivatives
BAPAT_pXO10191	COG2801	Transposase and inactivated derivatives
BAPAT_pXO10195	COG3443	Belongs to the bacterial solute-binding protein 9 family
BAPAT_pXO10198	COG4974	Belongs to the 'phage' integrase family
BAPAT_pXO10203	COG0457	Tetratricopeptide repeat
BAPAT_pXO10205	COG1923	regulation of RNA biosynthetic process
BAPAT_pXO20045	COG1192	Involved in chromosome partitioning
BAPAT_pXO20052	COG2801	Transposase and inactivated derivatives
BAPAT_pXO20059	COG1683	Conserved Protein
BAPAT_pXO20060	COG1309	transcriptional regulator
BAPAT_pXO20078	COG0681	Belongs to the peptidase S26 family
BAPAT_pXO20084	COG1280	lysine exporter protein (LysE YggA)
BAPAT_pXO20091	COG4166	transmembrane transport
BAPAT_pXO20095	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BAPAT_pXO20105	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BAPAT_pXO20106	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BAPAT_tRNALeu6	COG0544	peptidyl-prolyl cis-trans isomerase activity