BAS0001 SM00382 ATPases associated with a variety of cellular activities BAS0001 SM00760 Bacterial dnaA protein helix-turn-helix domain BAS0002 SM00480 DNA polymerase III beta subunit BAS0005 SM00387 Histidine kinase-like ATPases BAS0005 SM00433 TopoisomeraseII BAS0006 SM00434 DNA Topoisomerase IV BAS0011 SM00116 Domain in cystathionine beta-synthase and other proteins. BAS0011 SM01240 BAS0011 BAS0012 SM00936 Penicillin-binding protein 5, C-terminal domain BAS0021 SM00382 ATPases associated with a variety of cellular activities BAS0023 SM00493 BAS0023 BAS0036 SM00966 SpoVT / AbrB like domain BAS0039 SM00493 BAS0039 BAS0040 SM00650 Ribosomal RNA adenine dimethylases BAS0049 SM01400 BAS0049 BAS0052 SM00487 DEAD-like helicases superfamily BAS0052 SM00490 helicase superfamily c-terminal domain BAS0052 SM00982 BAS0052 BAS0052 SM01058 CarD-like/TRCF domain BAS0053 SM00966 SpoVT / AbrB like domain BAS0056 SM00363 S4 RNA-binding domain BAS0060 SM00316 Ribosomal protein S1-like RNA-binding domain BAS0061 SM00331 Sigma factor PP2C-like phosphatases BAS0061 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BAS0062 SM00977 TilS substrate C-terminal domain BAS0064 SM00382 ATPases associated with a variety of cellular activities BAS0072 SM00905 Dihydroneopterin aldolase BAS0074 SM00530 Helix-turn-helix XRE-family like proteins BAS0081 SM00382 ATPases associated with a variety of cellular activities BAS0081 SM01086 C-terminal, D2-small domain, of ClpB protein BAS0082 SM00382 ATPases associated with a variety of cellular activities BAS0084 SM00670 Large family of predicted nucleotide-binding domains BAS0089 SM00840 BAS0089 BAS0090 SM00535 Ribonuclease III family BAS0091 SM00967 RNA 2'-O ribose methyltransferase substrate binding BAS0093 SM00421 helix_turn_helix, Lux Regulon BAS0096 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BAS0097 SM00649 Ribosomal protein L11/L12 BAS0103 SM00663 RNA polymerase I subunit A N-terminus BAS0107 SM00838 Elongation factor G C-terminus BAS0107 SM00889 Elongation factor G, domain IV BAS0109 SM01403 BAS0109 BAS0113 SM01382 BAS0113 BAS0113 SM01383 BAS0113 BAS0116 SM00322 K homology RNA-binding domain BAS0120 SM01374 BAS0120 BAS0121 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BAS0133 SM00316 Ribosomal protein S1-like RNA-binding domain BAS0137 SM00662 RNA polymerases D BAS0139 SM00382 ATPases associated with a variety of cellular activities BAS0140 SM00382 ATPases associated with a variety of cellular activities BAS0146 SM00646 BAS0146 BAS0149 SM01251 BAS0149 BAS0162 SM00345 helix_turn_helix gluconate operon transcriptional repressor BAS0162 SM00895 BAS0162 BAS0166 SM01350 BAS0166 BAS0176 SM00382 ATPases associated with a variety of cellular activities BAS0176 SM00930 BAS0176 BAS0178 SM00829 Enoylreductase BAS0188 SM00382 ATPases associated with a variety of cellular activities BAS0189 SM00382 ATPases associated with a variety of cellular activities BAS0192 SM00342 helix_turn_helix, arabinose operon control protein BAS0207 SM00563 Phosphate acyltransferases BAS0208 SM00354 helix_turn _helix lactose operon repressor BAS0217 SM00382 ATPases associated with a variety of cellular activities BAS0221 SM00382 ATPases associated with a variety of cellular activities BAS0222 SM00382 ATPases associated with a variety of cellular activities BAS0233 SM00487 DEAD-like helicases superfamily BAS0233 SM00490 helicase superfamily c-terminal domain BAS0238 SM01005 Alanine racemase, C-terminal domain BAS0241 SM00316 Ribosomal protein S1-like RNA-binding domain BAS0241 SM00732 Likely ribonuclease with RNase H fold. BAS0242 SM00731 SprT homologues. BAS0248 SM00382 ATPases associated with a variety of cellular activities BAS0249 SM00881 CoA binding domain BAS0252 SM00883 Chaperonin 10 Kd subunit BAS0256 SM00448 cheY-homologous receiver domain BAS0256 SM00862 Transcriptional regulatory protein, C terminal BAS0257 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BAS0257 SM00387 Histidine kinase-like ATPases BAS0257 SM00388 His Kinase A (phosphoacceptor) domain BAS0271 SM00382 ATPases associated with a variety of cellular activities BAS0272 SM00387 Histidine kinase-like ATPases BAS0272 SM00388 His Kinase A (phosphoacceptor) domain BAS0273 SM00448 cheY-homologous receiver domain BAS0273 SM00862 Transcriptional regulatory protein, C terminal BAS0275 SM01001 AIR carboxylase BAS0277 SM00998 Adenylosuccinate lyase C-terminus BAS0280 SM01211 BAS0280 BAS0285 SM00798 AICARFT/IMPCHase bienzyme BAS0285 SM00851 MGS-like domain BAS0286 SM01209 BAS0286 BAS0286 SM01210 BAS0286 BAS0288 SM00244 prohibitin homologues BAS0292 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BAS0292 SM00292 breast cancer carboxy-terminal domain BAS0292 SM00532 Ligase N family BAS0297 SM00382 ATPases associated with a variety of cellular activities BAS0297 SM00930 BAS0297 BAS0304 SM00347 helix_turn_helix multiple antibiotic resistance protein BAS0307 SM00845 GatB domain BAS0308 SM00046 Diacylglycerol kinase catalytic domain (presumed) BAS0311 SM00382 ATPases associated with a variety of cellular activities BAS0324 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BAS0333 SM01007 Class II Aldolase and Adducin N-terminal domain BAS0353 SM00062 Bacterial periplasmic substrate-binding proteins BAS0353 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BAS0354 SM00382 ATPases associated with a variety of cellular activities BAS0355 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BAS0355 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BAS0356 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BAS0356 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BAS0357 SM00642 Alpha-amylase domain BAS0361 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BAS0361 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BAS0361 SM00493 BAS0361 BAS0365 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BAS0365 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BAS0369 SM00382 ATPases associated with a variety of cellular activities BAS0370 SM00382 ATPases associated with a variety of cellular activities BAS0371 SM00060 Fibronectin type 3 domain BAS0371 SM00636 BAS0371 BAS0371 SM00637 BAS0371 BAS0377 SM00530 Helix-turn-helix XRE-family like proteins BAS0382 SM00946 Prolyl-tRNA synthetase, C-terminal BAS0391 SM00831 Cation transporter/ATPase, N-terminus BAS0393 SM00226 Low molecular weight phosphatase family BAS0413 SM00478 endonuclease III BAS0416 SM00530 Helix-turn-helix XRE-family like proteins BAS0418 SM00530 Helix-turn-helix XRE-family like proteins BAS0419 SM00530 Helix-turn-helix XRE-family like proteins BAS0425 SM00382 ATPases associated with a variety of cellular activities BAS0464 SM00382 ATPases associated with a variety of cellular activities BAS0468 SM00530 Helix-turn-helix XRE-family like proteins BAS0478 SM00984 UDP binding domain BAS0491 SM00478 endonuclease III BAS0491 SM00525 BAS0491 BAS0496 SM00382 ATPases associated with a variety of cellular activities BAS0500 SM00382 ATPases associated with a variety of cellular activities BAS0514 SM00567 E-Z type HEAT repeats BAS0517 SM00052 Putative diguanylate phosphodiesterase BAS0517 SM00091 PAS domain BAS0517 SM00267 diguanylate cyclase BAS0518 SM00763 PrkA AAA domain BAS0520 SM00364 Leucine-rich repeats, bacterial type BAS0520 SM00365 Leucine-rich repeat, SDS22-like subfamily BAS0520 SM00369 Leucine-rich repeats, typical (most populated) subfamily BAS0520 SM00725 NEAr Transporter domain BAS0523 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BAS0525 SM00244 prohibitin homologues BAS0526 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BAS0526 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BAS0527 SM00091 PAS domain BAS0527 SM00387 Histidine kinase-like ATPases BAS0528 SM00448 cheY-homologous receiver domain BAS0533 SM00248 ankyrin repeats BAS0535 SM00382 ATPases associated with a variety of cellular activities BAS0540 SM00448 cheY-homologous receiver domain BAS0540 SM00862 Transcriptional regulatory protein, C terminal BAS0541 SM00387 Histidine kinase-like ATPases BAS0541 SM00388 His Kinase A (phosphoacceptor) domain BAS0544 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BAS0544 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BAS0545 SM00387 Histidine kinase-like ATPases BAS0546 SM00448 cheY-homologous receiver domain BAS0548 SM00919 Malic enzyme, NAD binding domain BAS0548 SM01274 BAS0548 BAS0551 SM00345 helix_turn_helix gluconate operon transcriptional repressor BAS0553 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BAS0553 SM00387 Histidine kinase-like ATPases BAS0553 SM00388 His Kinase A (phosphoacceptor) domain BAS0554 SM00448 cheY-homologous receiver domain BAS0554 SM00862 Transcriptional regulatory protein, C terminal BAS0557 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BAS0557 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BAS0561 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BAS0561 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BAS0563 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BAS0566 SM00028 Tetratricopeptide repeats BAS0566 SM00530 Helix-turn-helix XRE-family like proteins BAS0578 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BAS0584 SM00382 ATPases associated with a variety of cellular activities BAS0590 SM00327 von Willebrand factor (vWF) type A domain BAS0591 SM00382 ATPases associated with a variety of cellular activities BAS0592 SM00155 Phospholipase D. Active site motifs. BAS0595 SM00052 Putative diguanylate phosphodiesterase BAS0595 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BAS0595 SM00091 PAS domain BAS0595 SM00267 diguanylate cyclase BAS0597 SM00345 helix_turn_helix gluconate operon transcriptional repressor BAS0597 SM00866 BAS0597 BAS0599 SM00642 Alpha-amylase domain BAS0606 SM00382 ATPases associated with a variety of cellular activities BAS0607 SM00062 Bacterial periplasmic substrate-binding proteins BAS0607 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BAS0617 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BAS0617 SM00387 Histidine kinase-like ATPases BAS0617 SM00388 His Kinase A (phosphoacceptor) domain BAS0618 SM00448 cheY-homologous receiver domain BAS0618 SM00862 Transcriptional regulatory protein, C terminal BAS0626 SM00382 ATPases associated with a variety of cellular activities BAS0629 SM00347 helix_turn_helix multiple antibiotic resistance protein BAS0631 SM00354 helix_turn _helix lactose operon repressor BAS0634 SM00382 ATPases associated with a variety of cellular activities BAS0641 SM00829 Enoylreductase BAS0643 SM00770 Zinc dependent phospholipase C (alpha toxin) BAS0650 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BAS0652 SM00530 Helix-turn-helix XRE-family like proteins BAS0661 SM00530 Helix-turn-helix XRE-family like proteins BAS0680 SM00899 BAS0680 BAS0687 SM00116 Domain in cystathionine beta-synthase and other proteins. BAS0690 SM00287 Bacterial SH3 domain homologues BAS0692 SM00382 ATPases associated with a variety of cellular activities BAS0708 SM00347 helix_turn_helix multiple antibiotic resistance protein BAS0717 SM00640 Glycosyl hydrolases family 32 BAS0719 SM00354 helix_turn _helix lactose operon repressor BAS0733 SM00347 helix_turn_helix multiple antibiotic resistance protein BAS0736 SM00450 Rhodanese Homology Domain BAS0738 SM00450 Rhodanese Homology Domain BAS0739 SM00450 Rhodanese Homology Domain BAS0739 SM00849 Metallo-beta-lactamase superfamily BAS0741 SM00450 Rhodanese Homology Domain BAS0742 SM00450 Rhodanese Homology Domain BAS0747 SM00829 Enoylreductase BAS0757 SM00287 Bacterial SH3 domain homologues BAS0759 SM00382 ATPases associated with a variety of cellular activities BAS0771 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen BAS0790 SM00344 helix_turn_helix ASNC type BAS0803 SM01060 BAS0803 BAS0809 SM00382 ATPases associated with a variety of cellular activities BAS0811 SM00382 ATPases associated with a variety of cellular activities BAS0812 SM00062 Bacterial periplasmic substrate-binding proteins BAS0812 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BAS0814 SM00382 ATPases associated with a variety of cellular activities BAS0829 SM00644 BAS0829 BAS0831 SM00729 Elongator protein 3, MiaB family, Radical SAM BAS0838 SM00957 SecA DEAD-like domain BAS0838 SM00958 SecA preprotein cross-linking domain BAS0841 SM00635 Bacterial Ig-like domain 2 BAS0851 SM00646 BAS0851 BAS0863 SM00382 ATPases associated with a variety of cellular activities BAS0866 SM00860 SMI1 / KNR4 family BAS0867 SM00860 SMI1 / KNR4 family BAS0869 SM00091 PAS domain BAS0869 SM00387 Histidine kinase-like ATPases BAS0870 SM00448 cheY-homologous receiver domain BAS0877 SM00422 helix_turn_helix, mercury resistance BAS0900 SM00347 helix_turn_helix multiple antibiotic resistance protein BAS0907 SM01120 BAS0907 BAS0914 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BAS0916 SM00460 Transglutaminase/protease-like homologues BAS0930 SM00331 Sigma factor PP2C-like phosphatases BAS0930 SM00448 cheY-homologous receiver domain BAS0931 SM00138 Methyltransferase, chemotaxis proteins BAS0932 SM00387 Histidine kinase-like ATPases BAS0932 SM00388 His Kinase A (phosphoacceptor) domain BAS0932 SM00448 cheY-homologous receiver domain BAS0939 SM00829 Enoylreductase BAS0947 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BAS0952 SM00028 Tetratricopeptide repeats BAS0956 SM00530 Helix-turn-helix XRE-family like proteins BAS0968 SM00347 helix_turn_helix multiple antibiotic resistance protein BAS0976 SM00347 helix_turn_helix multiple antibiotic resistance protein BAS0979 SM00382 ATPases associated with a variety of cellular activities BAS0993 SM00422 helix_turn_helix, mercury resistance BAS1014 SM00354 helix_turn _helix lactose operon repressor BAS1016 SM00849 Metallo-beta-lactamase superfamily BAS1021 SM00725 NEAr Transporter domain BAS1033 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BAS1036 SM00342 helix_turn_helix, arabinose operon control protein BAS1036 SM00871 Bacterial transcription activator, effector binding domain BAS1039 SM00387 Histidine kinase-like ATPases BAS1039 SM00388 His Kinase A (phosphoacceptor) domain BAS1040 SM00448 cheY-homologous receiver domain BAS1040 SM00862 Transcriptional regulatory protein, C terminal BAS1046 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BAS1046 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BAS1054 SM00357 Cold shock protein domain BAS1076 SM01060 BAS1076 BAS1079 SM00642 Alpha-amylase domain BAS1080 SM00530 Helix-turn-helix XRE-family like proteins BAS1082 SM00316 Ribosomal protein S1-like RNA-binding domain BAS1090 SM00382 ATPases associated with a variety of cellular activities BAS1090 SM01086 C-terminal, D2-small domain, of ClpB protein BAS1096 SM00825 Beta-ketoacyl synthase BAS1104 SM00382 ATPases associated with a variety of cellular activities BAS1105 SM00382 ATPases associated with a variety of cellular activities BAS1112 SM00155 Phospholipase D. Active site motifs. BAS1117 SM01118 BAS1117 BAS1119 SM00954 Region found in RelA / SpoT proteins BAS1153 SM00635 Bacterial Ig-like domain 2 BAS1177 SM00861 Transketolase, pyrimidine binding domain BAS1178 SM00530 Helix-turn-helix XRE-family like proteins BAS1195 SM00530 Helix-turn-helix XRE-family like proteins BAS1199 SM00382 ATPases associated with a variety of cellular activities BAS1203 SM00014 Acid phosphatase homologues BAS1213 SM00448 cheY-homologous receiver domain BAS1213 SM00862 Transcriptional regulatory protein, C terminal BAS1214 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BAS1214 SM00387 Histidine kinase-like ATPases BAS1214 SM00388 His Kinase A (phosphoacceptor) domain BAS1215 SM00345 helix_turn_helix gluconate operon transcriptional repressor BAS1215 SM00895 BAS1215 BAS1230 SM00822 BAS1230 BAS1242 SM00420 helix_turn_helix, Deoxyribose operon repressor BAS1242 SM01134 BAS1242 BAS1246 SM00365 Leucine-rich repeat, SDS22-like subfamily BAS1246 SM00369 Leucine-rich repeats, typical (most populated) subfamily BAS1252 SM00387 Histidine kinase-like ATPases BAS1252 SM00388 His Kinase A (phosphoacceptor) domain BAS1253 SM00347 helix_turn_helix multiple antibiotic resistance protein BAS1256 SM00387 Histidine kinase-like ATPases BAS1256 SM00388 His Kinase A (phosphoacceptor) domain BAS1268 SM00465 GIY-YIG type nucleases (URI domain) BAS1268 SM00496 Intron-encoded nuclease repeat 2 BAS1271 SM00345 helix_turn_helix gluconate operon transcriptional repressor BAS1272 SM00382 ATPases associated with a variety of cellular activities BAS1274 SM00382 ATPases associated with a variety of cellular activities BAS1278 SM00344 helix_turn_helix ASNC type BAS1299 SM00347 helix_turn_helix multiple antibiotic resistance protein BAS1311 SM00917 LeuA allosteric (dimerisation) domain BAS1312 SM01329 BAS1312 BAS1347 SM00387 Histidine kinase-like ATPases BAS1348 SM00421 helix_turn_helix, Lux Regulon BAS1348 SM00448 cheY-homologous receiver domain BAS1367 SM00091 PAS domain BAS1367 SM00388 His Kinase A (phosphoacceptor) domain BAS1371 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BAS1371 SM00387 Histidine kinase-like ATPases BAS1371 SM00388 His Kinase A (phosphoacceptor) domain BAS1382 SM00363 S4 RNA-binding domain BAS1386 SM00448 cheY-homologous receiver domain BAS1386 SM00862 Transcriptional regulatory protein, C terminal BAS1387 SM00091 PAS domain BAS1387 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BAS1387 SM00387 Histidine kinase-like ATPases BAS1387 SM00388 His Kinase A (phosphoacceptor) domain BAS1389 SM00257 Lysin motif BAS1394 SM00487 DEAD-like helicases superfamily BAS1394 SM00490 helicase superfamily c-terminal domain BAS1396 SM00257 Lysin motif BAS1399 SM00422 helix_turn_helix, mercury resistance BAS1401 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BAS1404 SM00644 BAS1404 BAS1406 SM00870 BAS1406 BAS1408 SM00316 Ribosomal protein S1-like RNA-binding domain BAS1409 SM01240 BAS1409 BAS1420 SM00411 bacterial (prokaryotic) histone like domain BAS1425 SM00562 BAS1425 BAS1429 SM00028 Tetratricopeptide repeats BAS1430 SM00914 BAS1430 BAS1439 SM00986 Uracil DNA glycosylase superfamily BAS1439 SM00987 UreE urease accessory protein, C-terminal domain BAS1443 SM00851 MGS-like domain BAS1452 SM00479 BAS1452 BAS1452 SM00487 DEAD-like helicases superfamily BAS1452 SM00491 BAS1452 BAS1456 SM00478 endonuclease III BAS1456 SM00525 BAS1456 BAS1458 SM00060 Fibronectin type 3 domain BAS1468 SM00981 BAS1468 BAS1470 SM00491 BAS1470 BAS1483 SM00450 Rhodanese Homology Domain BAS1489 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BAS1489 SM00475 5'-3' exonuclease BAS1512 SM00357 Cold shock protein domain BAS1522 SM00849 Metallo-beta-lactamase superfamily BAS1523 SM00422 helix_turn_helix, mercury resistance BAS1523 SM00871 Bacterial transcription activator, effector binding domain BAS1541 SM00448 cheY-homologous receiver domain BAS1542 SM00073 Histidine Phosphotransfer domain BAS1543 SM00260 Two component signalling adaptor domain BAS1543 SM00387 Histidine kinase-like ATPases BAS1543 SM01231 BAS1543 BAS1547 SM00138 Methyltransferase, chemotaxis proteins BAS1563 SM00382 ATPases associated with a variety of cellular activities BAS1571 SM00260 Two component signalling adaptor domain BAS1572 SM00448 cheY-homologous receiver domain BAS1576 SM00028 Tetratricopeptide repeats BAS1579 SM00028 Tetratricopeptide repeats BAS1595 SM00382 ATPases associated with a variety of cellular activities BAS1595 SM00962 SRP54-type protein, GTPase domain BAS1597 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BAS1606 SM00530 Helix-turn-helix XRE-family like proteins BAS1610 SM00382 ATPases associated with a variety of cellular activities BAS1613 SM00849 Metallo-beta-lactamase superfamily BAS1613 SM01027 Beta-Casp domain BAS1616 SM00835 Cupin BAS1619 SM00855 Phosphoglycerate mutase family BAS1630 SM00345 helix_turn_helix gluconate operon transcriptional repressor BAS1630 SM00895 BAS1630 BAS1633 SM00833 Cobalamin synthesis protein cobW C-terminal domain BAS1650 SM00530 Helix-turn-helix XRE-family like proteins BAS1659 SM00421 helix_turn_helix, Lux Regulon BAS1659 SM00448 cheY-homologous receiver domain BAS1661 SM00382 ATPases associated with a variety of cellular activities BAS1664 SM00155 Phospholipase D. Active site motifs. BAS1668 SM00919 Malic enzyme, NAD binding domain BAS1668 SM01274 BAS1668 BAS1669 SM00387 Histidine kinase-like ATPases BAS1670 SM00448 cheY-homologous receiver domain BAS1671 SM00487 DEAD-like helicases superfamily BAS1671 SM00490 helicase superfamily c-terminal domain BAS1682 SM00646 BAS1682 BAS1683 SM00047 Lysozyme subfamily 2 BAS1719 SM00854 Bacterial capsule synthesis protein PGA_cap BAS1725 SM00850 LytTr DNA-binding domain BAS1737 SM00729 Elongator protein 3, MiaB family, Radical SAM BAS1739 SM00448 cheY-homologous receiver domain BAS1739 SM00862 Transcriptional regulatory protein, C terminal BAS1740 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BAS1741 SM00387 Histidine kinase-like ATPases BAS1741 SM00388 His Kinase A (phosphoacceptor) domain BAS1744 SM00450 Rhodanese Homology Domain BAS1754 SM01133 BAS1754 BAS1756 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BAS1763 SM01011 Aminopeptidase P, N-terminal domain BAS1765 SM00287 Bacterial SH3 domain homologues BAS1767 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BAS1767 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BAS1767 SM00493 BAS1767 BAS1786 SM00833 Cobalamin synthesis protein cobW C-terminal domain BAS1793 SM00382 ATPases associated with a variety of cellular activities BAS1794 SM00382 ATPases associated with a variety of cellular activities BAS1801 SM00347 helix_turn_helix multiple antibiotic resistance protein BAS1805 SM00382 ATPases associated with a variety of cellular activities BAS1806 SM00382 ATPases associated with a variety of cellular activities BAS1812 SM00287 Bacterial SH3 domain homologues BAS1815 SM00382 ATPases associated with a variety of cellular activities BAS1816 SM00448 cheY-homologous receiver domain BAS1816 SM00862 Transcriptional regulatory protein, C terminal BAS1817 SM00387 Histidine kinase-like ATPases BAS1817 SM00388 His Kinase A (phosphoacceptor) domain BAS1832 SM00448 cheY-homologous receiver domain BAS1832 SM00862 Transcriptional regulatory protein, C terminal BAS1833 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BAS1833 SM00387 Histidine kinase-like ATPases BAS1833 SM00388 His Kinase A (phosphoacceptor) domain BAS1852 SM00460 Transglutaminase/protease-like homologues BAS1858 SM00966 SpoVT / AbrB like domain BAS1860 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BAS1867 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BAS1867 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BAS1879 SM00833 Cobalamin synthesis protein cobW C-terminal domain BAS1897 SM00855 Phosphoglycerate mutase family BAS1907 SM00155 Phospholipase D. Active site motifs. BAS1913 SM01091 Transporter associated domain BAS1928 SM00244 prohibitin homologues BAS1929 SM00855 Phosphoglycerate mutase family BAS1932 SM01005 Alanine racemase, C-terminal domain BAS1938 SM00345 helix_turn_helix gluconate operon transcriptional repressor BAS1961 SM00487 DEAD-like helicases superfamily BAS1961 SM00490 helicase superfamily c-terminal domain BAS1965 SM00829 Enoylreductase BAS1969 SM00849 Metallo-beta-lactamase superfamily BAS1972 SM00460 Transglutaminase/protease-like homologues BAS1977 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BAS1981 SM00345 helix_turn_helix gluconate operon transcriptional repressor BAS1982 SM00382 ATPases associated with a variety of cellular activities BAS1984 SM00100 Cyclic nucleotide-monophosphate binding domain BAS1984 SM00419 helix_turn_helix, cAMP Regulatory protein BAS1985 SM00729 Elongator protein 3, MiaB family, Radical SAM BAS1987 SM00852 Probable molybdopterin binding domain BAS2000 SM00894 Excalibur calcium-binding domain BAS2009 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BAS2010 SM00382 ATPases associated with a variety of cellular activities BAS2017 SM00567 E-Z type HEAT repeats BAS2017 SM00932 Scaffold protein Nfu/NifU N terminal BAS2021 SM00836 DALR anticodon binding domain BAS2021 SM01016 Arginyl tRNA synthetase N terminal dom BAS2025 SM00028 Tetratricopeptide repeats BAS2026 SM00028 Tetratricopeptide repeats BAS2032 SM00327 von Willebrand factor (vWF) type A domain BAS2035 SM00382 ATPases associated with a variety of cellular activities BAS2038 SM00028 Tetratricopeptide repeats BAS2045 SM00857 Resolvase, N terminal domain BAS2056 SM00448 cheY-homologous receiver domain BAS2056 SM00862 Transcriptional regulatory protein, C terminal BAS2057 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BAS2057 SM00387 Histidine kinase-like ATPases BAS2057 SM00388 His Kinase A (phosphoacceptor) domain BAS2073 SM00382 ATPases associated with a variety of cellular activities BAS2086 SM00563 Phosphate acyltransferases BAS2108 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BAS2109 SM00421 helix_turn_helix, Lux Regulon BAS2109 SM00448 cheY-homologous receiver domain BAS2111 SM00829 Enoylreductase BAS2125 SM00382 ATPases associated with a variety of cellular activities BAS2134 SM01091 Transporter associated domain BAS2137 SM00387 Histidine kinase-like ATPases BAS2137 SM00388 His Kinase A (phosphoacceptor) domain BAS2140 SM00882 Coenzyme A transferase BAS2141 SM00882 Coenzyme A transferase BAS2144 SM00382 ATPases associated with a variety of cellular activities BAS2152 SM00219 Tyrosine kinase, catalytic domain BAS2154 SM00014 Acid phosphatase homologues BAS2158 SM00860 SMI1 / KNR4 family BAS2163 SM00530 Helix-turn-helix XRE-family like proteins BAS2174 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. BAS2201 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BAS2208 SM00823 Phosphopantetheine attachment site BAS2208 SM00824 Thioesterase BAS2209 SM00923 MbtH-like protein BAS2213 SM00411 bacterial (prokaryotic) histone like domain BAS2221 SM00363 S4 RNA-binding domain BAS2222 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BAS2235 SM00849 Metallo-beta-lactamase superfamily BAS2241 SM00849 Metallo-beta-lactamase superfamily BAS2245 SM01059 Chloramphenicol acetyltransferase BAS2250 SM00530 Helix-turn-helix XRE-family like proteins BAS2257 SM00357 Cold shock protein domain BAS2268 SM00859 Semialdehyde dehydrogenase, NAD binding domain BAS2275 SM00382 ATPases associated with a variety of cellular activities BAS2276 SM00382 ATPases associated with a variety of cellular activities BAS2277 SM00646 BAS2277 BAS2279 SM00530 Helix-turn-helix XRE-family like proteins BAS2295 SM01207 BAS2295 BAS2298 SM00849 Metallo-beta-lactamase superfamily BAS2301 SM00487 DEAD-like helicases superfamily BAS2301 SM00490 helicase superfamily c-terminal domain BAS2307 SM00382 ATPases associated with a variety of cellular activities BAS2312 SM00347 helix_turn_helix multiple antibiotic resistance protein BAS2313 SM00855 Phosphoglycerate mutase family BAS2329 SM00014 Acid phosphatase homologues BAS2330 SM00354 helix_turn _helix lactose operon repressor BAS2347 SM00530 Helix-turn-helix XRE-family like proteins BAS2351 SM00646 BAS2351 BAS2355 SM00382 ATPases associated with a variety of cellular activities BAS2357 SM00052 Putative diguanylate phosphodiesterase BAS2357 SM00091 PAS domain BAS2357 SM00267 diguanylate cyclase BAS2359 SM00860 SMI1 / KNR4 family BAS2361 SM00450 Rhodanese Homology Domain BAS2361 SM00849 Metallo-beta-lactamase superfamily BAS2364 SM00382 ATPases associated with a variety of cellular activities BAS2370 SM00878 Biotin carboxylase C-terminal domain BAS2384 SM00387 Histidine kinase-like ATPases BAS2384 SM00388 His Kinase A (phosphoacceptor) domain BAS2385 SM00448 cheY-homologous receiver domain BAS2385 SM00862 Transcriptional regulatory protein, C terminal BAS2397 SM00382 ATPases associated with a variety of cellular activities BAS2401 SM00422 helix_turn_helix, mercury resistance BAS2401 SM00871 Bacterial transcription activator, effector binding domain BAS2406 SM00342 helix_turn_helix, arabinose operon control protein BAS2409 SM00345 helix_turn_helix gluconate operon transcriptional repressor BAS2419 SM00448 cheY-homologous receiver domain BAS2419 SM00862 Transcriptional regulatory protein, C terminal BAS2421 SM00387 Histidine kinase-like ATPases BAS2423 SM00382 ATPases associated with a variety of cellular activities BAS2424 SM00382 ATPases associated with a variety of cellular activities BAS2427 SM00382 ATPases associated with a variety of cellular activities BAS2434 SM00345 helix_turn_helix gluconate operon transcriptional repressor BAS2435 SM01209 BAS2435 BAS2456 SM00091 PAS domain BAS2456 SM00387 Histidine kinase-like ATPases BAS2456 SM00388 His Kinase A (phosphoacceptor) domain BAS2461 SM00382 ATPases associated with a variety of cellular activities BAS2463 SM00387 Histidine kinase-like ATPases BAS2463 SM00388 His Kinase A (phosphoacceptor) domain BAS2466 SM00829 Enoylreductase BAS2467 SM00740 BAS2467 BAS2480 SM00422 helix_turn_helix, mercury resistance BAS2488 SM00345 helix_turn_helix gluconate operon transcriptional repressor BAS2499 SM00480 DNA polymerase III beta subunit BAS2521 SM00465 GIY-YIG type nucleases (URI domain) BAS2542 SM00642 Alpha-amylase domain BAS2546 SM00871 Bacterial transcription activator, effector binding domain BAS2550 SM00345 helix_turn_helix gluconate operon transcriptional repressor BAS2574 SM00382 ATPases associated with a variety of cellular activities BAS2578 SM00420 helix_turn_helix, Deoxyribose operon repressor BAS2578 SM01134 BAS2578 BAS2587 SM00861 Transketolase, pyrimidine binding domain BAS2597 SM00116 Domain in cystathionine beta-synthase and other proteins. BAS2597 SM00382 ATPases associated with a variety of cellular activities BAS2604 SM00060 Fibronectin type 3 domain BAS2604 SM00495 Chitin-binding domain type 3 BAS2613 SM00849 Metallo-beta-lactamase superfamily BAS2627 SM00341 Helicase and RNase D C-terminal BAS2627 SM00487 DEAD-like helicases superfamily BAS2627 SM00490 helicase superfamily c-terminal domain BAS2627 SM00956 BAS2627 BAS2635 SM01131 BAS2635 BAS2641 SM01130 BAS2641 BAS2645 SM00091 PAS domain BAS2645 SM00382 ATPases associated with a variety of cellular activities BAS2659 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BAS2667 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BAS2668 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BAS2668 SM00387 Histidine kinase-like ATPases BAS2668 SM00388 His Kinase A (phosphoacceptor) domain BAS2669 SM00448 cheY-homologous receiver domain BAS2669 SM00862 Transcriptional regulatory protein, C terminal BAS2707 SM00382 ATPases associated with a variety of cellular activities BAS2708 SM00345 helix_turn_helix gluconate operon transcriptional repressor BAS2713 SM00062 Bacterial periplasmic substrate-binding proteins BAS2714 SM00382 ATPases associated with a variety of cellular activities BAS2720 SM00028 Tetratricopeptide repeats BAS2738 SM00382 ATPases associated with a variety of cellular activities BAS2748 SM00830 Chorismate mutase type II BAS2756 SM00287 Bacterial SH3 domain homologues BAS2766 SM00382 ATPases associated with a variety of cellular activities BAS2771 SM01133 BAS2771 BAS2778 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BAS2782 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BAS2785 SM00346 helix_turn_helix isocitrate lyase regulation BAS2789 SM00098 Alkaline phosphatase homologues BAS2791 SM00530 Helix-turn-helix XRE-family like proteins BAS2796 SM00850 LytTr DNA-binding domain BAS2816 SM01060 BAS2816 BAS2827 SM00347 helix_turn_helix multiple antibiotic resistance protein BAS2828 SM00889 Elongation factor G, domain IV BAS2834 SM00382 ATPases associated with a variety of cellular activities BAS2835 SM00345 helix_turn_helix gluconate operon transcriptional repressor BAS2837 SM00382 ATPases associated with a variety of cellular activities BAS2843 SM00342 helix_turn_helix, arabinose operon control protein BAS2843 SM00871 Bacterial transcription activator, effector binding domain BAS2847 SM00345 helix_turn_helix gluconate operon transcriptional repressor BAS2852 SM00387 Histidine kinase-like ATPases BAS2852 SM00388 His Kinase A (phosphoacceptor) domain BAS2853 SM00448 cheY-homologous receiver domain BAS2853 SM00862 Transcriptional regulatory protein, C terminal BAS2881 SM00797 Allophanate hydrolase subunit 2 BAS2882 SM00796 Allophanate hydrolase subunit 1 BAS2883 SM00346 helix_turn_helix isocitrate lyase regulation BAS2887 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BAS2900 SM00849 Metallo-beta-lactamase superfamily BAS2916 SM00870 BAS2916 BAS2917 SM00530 Helix-turn-helix XRE-family like proteins BAS2923 SM00919 Malic enzyme, NAD binding domain BAS2923 SM01274 BAS2923 BAS2929 SM00448 cheY-homologous receiver domain BAS2930 SM00387 Histidine kinase-like ATPases BAS2940 SM01060 BAS2940 BAS2966 SM00382 ATPases associated with a variety of cellular activities BAS2971 SM00226 Low molecular weight phosphatase family BAS2974 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BAS2976 SM00028 Tetratricopeptide repeats BAS2980 SM00344 helix_turn_helix ASNC type BAS2987 SM00342 helix_turn_helix, arabinose operon control protein BAS2992 SM00347 helix_turn_helix multiple antibiotic resistance protein BAS2999 SM00448 cheY-homologous receiver domain BAS2999 SM00862 Transcriptional regulatory protein, C terminal BAS3000 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BAS3000 SM00387 Histidine kinase-like ATPases BAS3000 SM00388 His Kinase A (phosphoacceptor) domain BAS3012 SM00530 Helix-turn-helix XRE-family like proteins BAS3022 SM00382 ATPases associated with a variety of cellular activities BAS3024 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BAS3027 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BAS3027 SM00387 Histidine kinase-like ATPases BAS3027 SM00388 His Kinase A (phosphoacceptor) domain BAS3028 SM00448 cheY-homologous receiver domain BAS3028 SM00862 Transcriptional regulatory protein, C terminal BAS3030 SM00347 helix_turn_helix multiple antibiotic resistance protein BAS3049 SM00354 helix_turn _helix lactose operon repressor BAS3050 SM00028 Tetratricopeptide repeats BAS3056 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BAS3056 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BAS3056 SM00319 Homologues of the ligand binding domain of Tar BAS3060 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BAS3065 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BAS3073 SM00344 helix_turn_helix ASNC type BAS3086 SM00342 helix_turn_helix, arabinose operon control protein BAS3089 SM00287 Bacterial SH3 domain homologues BAS3099 SM00347 helix_turn_helix multiple antibiotic resistance protein BAS3103 SM00382 ATPases associated with a variety of cellular activities BAS3105 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BAS3118 SM00382 ATPases associated with a variety of cellular activities BAS3127 SM00530 Helix-turn-helix XRE-family like proteins BAS3128 SM01207 BAS3128 BAS3140 SM00382 ATPases associated with a variety of cellular activities BAS3143 SM00530 Helix-turn-helix XRE-family like proteins BAS3155 SM01266 BAS3155 BAS3158 SM00382 ATPases associated with a variety of cellular activities BAS3167 SM00028 Tetratricopeptide repeats BAS3172 SM01091 Transporter associated domain BAS3173 SM00422 helix_turn_helix, mercury resistance BAS3180 SM01350 BAS3180 BAS3181 SM00861 Transketolase, pyrimidine binding domain BAS3184 SM00829 Enoylreductase BAS3186 SM00829 Enoylreductase BAS3190 SM01276 BAS3190 BAS3199 SM00914 BAS3199 BAS3204 SM00345 helix_turn_helix gluconate operon transcriptional repressor BAS3204 SM00866 BAS3204 BAS3212 SM00849 Metallo-beta-lactamase superfamily BAS3226 SM00248 ankyrin repeats BAS3227 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BAS3228 SM00636 BAS3228 BAS3236 SM00871 Bacterial transcription activator, effector binding domain BAS3240 SM00382 ATPases associated with a variety of cellular activities BAS3245 SM00849 Metallo-beta-lactamase superfamily BAS3246 SM00641 Glycosyl hydrolases family 25 BAS3259 SM00849 Metallo-beta-lactamase superfamily BAS3260 SM00829 Enoylreductase BAS3286 SM00829 Enoylreductase BAS3287 SM00855 Phosphoglycerate mutase family BAS3289 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BAS3289 SM00534 ATPase domain of DNA mismatch repair MUTS family BAS3291 SM00642 Alpha-amylase domain BAS3305 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BAS3306 SM00829 Enoylreductase BAS3308 SM00028 Tetratricopeptide repeats BAS3323 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BAS3332 SM00479 BAS3332 BAS3333 SM00357 Cold shock protein domain BAS3338 SM01022 BAS3338 BAS3360 SM00852 Probable molybdopterin binding domain BAS3363 SM00729 Elongator protein 3, MiaB family, Radical SAM BAS3367 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BAS3367 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BAS3388 SM00382 ATPases associated with a variety of cellular activities BAS3391 SM00434 DNA Topoisomerase IV BAS3392 SM00387 Histidine kinase-like ATPases BAS3392 SM00433 TopoisomeraseII BAS3394 SM00881 CoA binding domain BAS3395 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BAS3396 SM00448 cheY-homologous receiver domain BAS3396 SM00862 Transcriptional regulatory protein, C terminal BAS3399 SM01207 BAS3399 BAS3402 SM00257 Lysin motif BAS3402 SM00636 BAS3402 BAS3404 SM00479 BAS3404 BAS3407 SM00382 ATPases associated with a variety of cellular activities BAS3415 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BAS3428 SM00644 BAS3428 BAS3428 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. BAS3429 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BAS3432 SM00091 PAS domain BAS3432 SM00387 Histidine kinase-like ATPases BAS3432 SM00388 His Kinase A (phosphoacceptor) domain BAS3438 SM01058 CarD-like/TRCF domain BAS3463 SM00644 BAS3463 BAS3466 SM00382 ATPases associated with a variety of cellular activities BAS3467 SM00382 ATPases associated with a variety of cellular activities BAS3470 SM00861 Transketolase, pyrimidine binding domain BAS3474 SM00382 ATPases associated with a variety of cellular activities BAS3475 SM00062 Bacterial periplasmic substrate-binding proteins BAS3480 SM00857 Resolvase, N terminal domain BAS3484 SM00028 Tetratricopeptide repeats BAS3490 SM00287 Bacterial SH3 domain homologues BAS3490 SM00644 BAS3490 BAS3520 SM00530 Helix-turn-helix XRE-family like proteins BAS3534 SM00382 ATPases associated with a variety of cellular activities BAS3544 SM00530 Helix-turn-helix XRE-family like proteins BAS3545 SM00530 Helix-turn-helix XRE-family like proteins BAS3549 SM01230 BAS3549 BAS3550 SM00422 helix_turn_helix, mercury resistance BAS3555 SM00382 ATPases associated with a variety of cellular activities BAS3562 SM00287 Bacterial SH3 domain homologues BAS3565 SM00420 helix_turn_helix, Deoxyribose operon repressor BAS3565 SM01134 BAS3565 BAS3571 SM00636 BAS3571 BAS3574 SM00411 bacterial (prokaryotic) histone like domain BAS3580 SM00382 ATPases associated with a variety of cellular activities BAS3585 SM00342 helix_turn_helix, arabinose operon control protein BAS3587 SM00478 endonuclease III BAS3594 SM00052 Putative diguanylate phosphodiesterase BAS3594 SM00091 PAS domain BAS3594 SM00267 diguanylate cyclase BAS3600 SM00345 helix_turn_helix gluconate operon transcriptional repressor BAS3604 SM00148 Phospholipase C, catalytic domain (part); domain X BAS3606 SM00257 Lysin motif BAS3612 SM00387 Histidine kinase-like ATPases BAS3612 SM00388 His Kinase A (phosphoacceptor) domain BAS3613 SM00448 cheY-homologous receiver domain BAS3613 SM00862 Transcriptional regulatory protein, C terminal BAS3616 SM00382 ATPases associated with a variety of cellular activities BAS3617 SM00853 MutL C terminal dimerisation domain BAS3617 SM01340 BAS3617 BAS3618 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BAS3618 SM00534 ATPase domain of DNA mismatch repair MUTS family BAS3621 SM00729 Elongator protein 3, MiaB family, Radical SAM BAS3627 SM00322 K homology RNA-binding domain BAS3627 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BAS3630 SM00852 Probable molybdopterin binding domain BAS3642 SM00382 ATPases associated with a variety of cellular activities BAS3644 SM00345 helix_turn_helix gluconate operon transcriptional repressor BAS3644 SM00866 BAS3644 BAS3645 SM00382 ATPases associated with a variety of cellular activities BAS3645 SM00843 BAS3645 BAS3648 SM00849 Metallo-beta-lactamase superfamily BAS3650 SM01130 BAS3650 BAS3652 SM00859 Semialdehyde dehydrogenase, NAD binding domain BAS3658 SM00316 Ribosomal protein S1-like RNA-binding domain BAS3658 SM00322 K homology RNA-binding domain BAS3659 SM01387 BAS3659 BAS3660 SM00904 Riboflavin kinase BAS3667 SM00316 Ribosomal protein S1-like RNA-binding domain BAS3667 SM00322 K homology RNA-binding domain BAS3669 SM00479 BAS3669 BAS3669 SM00481 DNA polymerase alpha chain like domain BAS3671 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BAS3680 SM00382 ATPases associated with a variety of cellular activities BAS3680 SM01086 C-terminal, D2-small domain, of ClpB protein BAS3684 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BAS3684 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BAS3684 SM00493 BAS3684 BAS3686 SM00881 CoA binding domain BAS3696 SM00382 ATPases associated with a variety of cellular activities BAS3696 SM00962 SRP54-type protein, GTPase domain BAS3696 SM00963 SRP54-type protein, helical bundle domain BAS3698 SM00382 ATPases associated with a variety of cellular activities BAS3698 SM00962 SRP54-type protein, GTPase domain BAS3698 SM00963 SRP54-type protein, helical bundle domain BAS3699 SM00968 SMC proteins Flexible Hinge Domain BAS3700 SM00358 Double-stranded RNA binding motif BAS3700 SM00535 Ribonuclease III family BAS3702 SM00822 BAS3702 BAS3703 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BAS3706 SM00487 DEAD-like helicases superfamily BAS3706 SM00490 helicase superfamily c-terminal domain BAS3707 SM01120 BAS3707 BAS3707 SM01121 BAS3707 BAS3710 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain BAS3713 SM00220 Serine/Threonine protein kinases, catalytic domain BAS3713 SM00740 BAS3713 BAS3714 SM00331 Sigma factor PP2C-like phosphatases BAS3714 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BAS3719 SM00487 DEAD-like helicases superfamily BAS3719 SM00490 helicase superfamily c-terminal domain BAS3721 SM01409 BAS3721 BAS3722 SM00072 Guanylate kinase homologues. BAS3725 SM00831 Cation transporter/ATPase, N-terminus BAS3734 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BAS3737 SM00851 MGS-like domain BAS3737 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BAS3737 SM01209 BAS3737 BAS3738 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BAS3743 SM00363 S4 RNA-binding domain BAS3748 SM00363 S4 RNA-binding domain BAS3757 SM00864 Tubulin/FtsZ family, GTPase domain BAS3757 SM00865 Tubulin/FtsZ family, C-terminal domain BAS3758 SM00842 Cell division protein FtsA BAS3766 SM00740 BAS3766 BAS3767 SM00740 BAS3767 BAS3773 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains BAS3781 SM00530 Helix-turn-helix XRE-family like proteins BAS3784 SM00644 BAS3784 BAS3808 SM00507 HNH nucleases BAS3815 SM00530 Helix-turn-helix XRE-family like proteins BAS3827 SM00382 ATPases associated with a variety of cellular activities BAS3830 SM00530 Helix-turn-helix XRE-family like proteins BAS3831 SM00530 Helix-turn-helix XRE-family like proteins BAS3833 SM00530 Helix-turn-helix XRE-family like proteins BAS3838 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BAS3846 SM00855 Phosphoglycerate mutase family BAS3859 SM00878 Biotin carboxylase C-terminal domain BAS3863 SM00670 Large family of predicted nucleotide-binding domains BAS3868 SM00838 Elongation factor G C-terminus BAS3882 SM00861 Transketolase, pyrimidine binding domain BAS3887 SM00849 Metallo-beta-lactamase superfamily BAS3899 SM00052 Putative diguanylate phosphodiesterase BAS3916 SM00387 Histidine kinase-like ATPases BAS3916 SM00388 His Kinase A (phosphoacceptor) domain BAS3919 SM00354 helix_turn _helix lactose operon repressor BAS3923 SM00642 Alpha-amylase domain BAS3924 SM00642 Alpha-amylase domain BAS3925 SM00382 ATPases associated with a variety of cellular activities BAS3931 SM00382 ATPases associated with a variety of cellular activities BAS3948 SM01007 Class II Aldolase and Adducin N-terminal domain BAS3954 SM00267 diguanylate cyclase BAS3961 SM01061 CAT RNA binding domain BAS3963 SM00345 helix_turn_helix gluconate operon transcriptional repressor BAS3963 SM00866 BAS3963 BAS3966 SM00849 Metallo-beta-lactamase superfamily BAS3984 SM00387 Histidine kinase-like ATPases BAS3986 SM00936 Penicillin-binding protein 5, C-terminal domain BAS3987 SM00345 helix_turn_helix gluconate operon transcriptional repressor BAS3988 SM00382 ATPases associated with a variety of cellular activities BAS3991 SM00347 helix_turn_helix multiple antibiotic resistance protein BAS3995 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BAS4013 SM00354 helix_turn _helix lactose operon repressor BAS4016 SM00704 CDGSH-type zinc finger. Function unknown. BAS4023 SM00729 Elongator protein 3, MiaB family, Radical SAM BAS4023 SM00876 Biotin and Thiamin Synthesis associated domain BAS4033 SM00347 helix_turn_helix multiple antibiotic resistance protein BAS4040 SM00859 Semialdehyde dehydrogenase, NAD binding domain BAS4049 SM00849 Metallo-beta-lactamase superfamily BAS4057 SM00382 ATPases associated with a variety of cellular activities BAS4059 SM00062 Bacterial periplasmic substrate-binding proteins BAS4059 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BAS4066 SM00861 Transketolase, pyrimidine binding domain BAS4070 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BAS4072 SM00091 PAS domain BAS4072 SM00382 ATPases associated with a variety of cellular activities BAS4076 SM00448 cheY-homologous receiver domain BAS4077 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BAS4080 SM00363 S4 RNA-binding domain BAS4081 SM00861 Transketolase, pyrimidine binding domain BAS4088 SM00878 Biotin carboxylase C-terminal domain BAS4097 SM00382 ATPases associated with a variety of cellular activities BAS4101 SM00841 Elongation factor P, C-terminal BAS4101 SM01185 BAS4101 BAS4108 SM00529 Helix-turn-helix diphteria tox regulatory element BAS4112 SM00450 Rhodanese Homology Domain BAS4113 SM00354 helix_turn _helix lactose operon repressor BAS4125 SM00382 ATPases associated with a variety of cellular activities BAS4126 SM00345 helix_turn_helix gluconate operon transcriptional repressor BAS4132 SM00487 DEAD-like helicases superfamily BAS4132 SM00490 helicase superfamily c-terminal domain BAS4138 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. BAS4145 SM00382 ATPases associated with a variety of cellular activities BAS4156 SM01018 B12 binding domain BAS4161 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BAS4163 SM00849 Metallo-beta-lactamase superfamily BAS4171 SM00382 ATPases associated with a variety of cellular activities BAS4183 SM00382 ATPases associated with a variety of cellular activities BAS4186 SM00518 AP endonuclease family 2 BAS4187 SM00487 DEAD-like helicases superfamily BAS4187 SM00490 helicase superfamily c-terminal domain BAS4195 SM00400 zinc finger BAS4195 SM00493 BAS4195 BAS4195 SM00766 DNA primase DnaG DnaB-binding BAS4197 SM00116 Domain in cystathionine beta-synthase and other proteins. BAS4203 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BAS4209 SM00729 Elongator protein 3, MiaB family, Radical SAM BAS4212 SM00271 DnaJ molecular chaperone homology domain BAS4216 SM00729 Elongator protein 3, MiaB family, Radical SAM BAS4218 SM00838 Elongation factor G C-terminus BAS4223 SM00849 Metallo-beta-lactamase superfamily BAS4226 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BAS4229 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BAS4231 SM01103 BAS4231 BAS4242 SM00954 Region found in RelA / SpoT proteins BAS4244 SM00098 Alkaline phosphatase homologues BAS4250 SM00855 Phosphoglycerate mutase family BAS4258 SM00530 Helix-turn-helix XRE-family like proteins BAS4263 SM00382 ATPases associated with a variety of cellular activities BAS4282 SM00732 Likely ribonuclease with RNase H fold. BAS4284 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BAS4290 SM00028 Tetratricopeptide repeats BAS4294 SM00382 ATPases associated with a variety of cellular activities BAS4302 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BAS4302 SM00954 Region found in RelA / SpoT proteins BAS4311 SM01323 BAS4311 BAS4315 SM00382 ATPases associated with a variety of cellular activities BAS4316 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BAS4321 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BAS4324 SM00257 Lysin motif BAS4334 SM00382 ATPases associated with a variety of cellular activities BAS4335 SM00387 Histidine kinase-like ATPases BAS4337 SM00448 cheY-homologous receiver domain BAS4337 SM00862 Transcriptional regulatory protein, C terminal BAS4339 SM01317 BAS4339 BAS4357 SM00257 Lysin motif BAS4359 SM01004 Delta-aminolevulinic acid dehydratase BAS4364 SM00347 helix_turn_helix multiple antibiotic resistance protein BAS4367 SM00382 ATPases associated with a variety of cellular activities BAS4367 SM00464 Found in ATP-dependent protease La (LON) BAS4368 SM00382 ATPases associated with a variety of cellular activities BAS4369 SM00382 ATPases associated with a variety of cellular activities BAS4369 SM00994 ClpX C4-type zinc finger BAS4369 SM01086 C-terminal, D2-small domain, of ClpB protein BAS4378 SM00909 Sporulation and spore germination BAS4385 SM00421 helix_turn_helix, Lux Regulon BAS4393 SM00382 ATPases associated with a variety of cellular activities BAS4394 SM00382 ATPases associated with a variety of cellular activities BAS4396 SM00342 helix_turn_helix, arabinose operon control protein BAS4396 SM00448 cheY-homologous receiver domain BAS4400 SM00530 Helix-turn-helix XRE-family like proteins BAS4405 SM00382 ATPases associated with a variety of cellular activities BAS4416 SM00465 GIY-YIG type nucleases (URI domain) BAS4418 SM00893 Electron transfer flavoprotein domain BAS4419 SM00893 Electron transfer flavoprotein domain BAS4431 SM00382 ATPases associated with a variety of cellular activities BAS4432 SM00387 Histidine kinase-like ATPases BAS4432 SM00388 His Kinase A (phosphoacceptor) domain BAS4433 SM00448 cheY-homologous receiver domain BAS4433 SM00862 Transcriptional regulatory protein, C terminal BAS4435 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BAS4439 SM00382 ATPases associated with a variety of cellular activities BAS4442 SM00725 NEAr Transporter domain BAS4443 SM00725 NEAr Transporter domain BAS4444 SM00725 NEAr Transporter domain BAS4446 SM00363 S4 RNA-binding domain BAS4447 SM00463 Small MutS-related domain BAS4447 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BAS4447 SM00534 ATPase domain of DNA mismatch repair MUTS family BAS4448 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BAS4448 SM00481 DNA polymerase alpha chain like domain BAS4448 SM00483 DNA polymerase X family BAS4455 SM00873 B3/4 domain BAS4455 SM00874 tRNA synthetase B5 domain BAS4455 SM00896 Ferredoxin-fold anticodon binding domain BAS4457 SM00967 RNA 2'-O ribose methyltransferase substrate binding BAS4472 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BAS4474 SM00382 ATPases associated with a variety of cellular activities BAS4478 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BAS4481 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BAS4481 SM01232 BAS4481 BAS4482 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BAS4482 SM00474 3'-5' exonuclease BAS4482 SM00475 5'-3' exonuclease BAS4482 SM00482 DNA polymerase A domain BAS4483 SM00091 PAS domain BAS4483 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BAS4483 SM00387 Histidine kinase-like ATPases BAS4483 SM00388 His Kinase A (phosphoacceptor) domain BAS4484 SM00448 cheY-homologous receiver domain BAS4484 SM00862 Transcriptional regulatory protein, C terminal BAS4487 SM01329 BAS4487 BAS4496 SM00345 helix_turn_helix gluconate operon transcriptional repressor BAS4497 SM00919 Malic enzyme, NAD binding domain BAS4497 SM01274 BAS4497 BAS4498 SM00481 DNA polymerase alpha chain like domain BAS4505 SM00116 Domain in cystathionine beta-synthase and other proteins. BAS4507 SM00849 Metallo-beta-lactamase superfamily BAS4519 SM00530 Helix-turn-helix XRE-family like proteins BAS4521 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BAS4521 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BAS4545 SM00981 BAS4545 BAS4554 SM00363 S4 RNA-binding domain BAS4554 SM01390 BAS4554 BAS4556 SM00363 S4 RNA-binding domain BAS4562 SM00116 Domain in cystathionine beta-synthase and other proteins. BAS4565 SM00448 cheY-homologous receiver domain BAS4565 SM00862 Transcriptional regulatory protein, C terminal BAS4566 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BAS4566 SM00387 Histidine kinase-like ATPases BAS4566 SM00388 His Kinase A (phosphoacceptor) domain BAS4567 SM00248 ankyrin repeats BAS4575 SM00354 helix_turn _helix lactose operon repressor BAS4585 SM00843 BAS4585 BAS4593 SM00849 Metallo-beta-lactamase superfamily BAS4597 SM00642 Alpha-amylase domain BAS4601 SM00420 helix_turn_helix, Deoxyribose operon repressor BAS4606 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BAS4611 SM01058 CarD-like/TRCF domain BAS4618 SM00852 Probable molybdopterin binding domain BAS4622 SM00729 Elongator protein 3, MiaB family, Radical SAM BAS4626 SM00450 Rhodanese Homology Domain BAS4643 SM00382 ATPases associated with a variety of cellular activities BAS4646 SM00729 Elongator protein 3, MiaB family, Radical SAM BAS4648 SM00382 ATPases associated with a variety of cellular activities BAS4656 SM00014 Acid phosphatase homologues BAS4659 SM00852 Probable molybdopterin binding domain BAS4668 SM00387 Histidine kinase-like ATPases BAS4669 SM00387 Histidine kinase-like ATPases BAS4669 SM00388 His Kinase A (phosphoacceptor) domain BAS4676 SM00382 ATPases associated with a variety of cellular activities BAS4688 SM01234 BAS4688 BAS4689 SM00947 Carbonic anhydrase BAS4693 SM00894 Excalibur calcium-binding domain BAS4704 SM00899 BAS4704 BAS4706 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BAS4706 SM00387 Histidine kinase-like ATPases BAS4706 SM00388 His Kinase A (phosphoacceptor) domain BAS4707 SM00448 cheY-homologous receiver domain BAS4707 SM00862 Transcriptional regulatory protein, C terminal BAS4713 SM00046 Diacylglycerol kinase catalytic domain (presumed) BAS4723 SM00382 ATPases associated with a variety of cellular activities BAS4724 SM00342 helix_turn_helix, arabinose operon control protein BAS4724 SM00871 Bacterial transcription activator, effector binding domain BAS4725 SM00448 cheY-homologous receiver domain BAS4725 SM00862 Transcriptional regulatory protein, C terminal BAS4726 SM00387 Histidine kinase-like ATPases BAS4731 SM00382 ATPases associated with a variety of cellular activities BAS4736 SM00345 helix_turn_helix gluconate operon transcriptional repressor BAS4736 SM00866 BAS4736 BAS4744 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BAS4744 SM00387 Histidine kinase-like ATPases BAS4744 SM00388 His Kinase A (phosphoacceptor) domain BAS4745 SM00448 cheY-homologous receiver domain BAS4745 SM00862 Transcriptional regulatory protein, C terminal BAS4746 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BAS4754 SM00357 Cold shock protein domain BAS4761 SM00642 Alpha-amylase domain BAS4770 SM00316 Ribosomal protein S1-like RNA-binding domain BAS4772 SM00344 helix_turn_helix ASNC type BAS4779 SM01298 BAS4779 BAS4780 SM00479 BAS4780 BAS4799 SM00871 Bacterial transcription activator, effector binding domain BAS4810 SM00382 ATPases associated with a variety of cellular activities BAS4815 SM00860 SMI1 / KNR4 family BAS4828 SM00420 helix_turn_helix, Deoxyribose operon repressor BAS4836 SM00422 helix_turn_helix, mercury resistance BAS4837 SM00855 Phosphoglycerate mutase family BAS4840 SM00729 Elongator protein 3, MiaB family, Radical SAM BAS4851 SM00382 ATPases associated with a variety of cellular activities BAS4855 SM00382 ATPases associated with a variety of cellular activities BAS4855 SM00930 BAS4855 BAS4858 SM00493 BAS4858 BAS4874 SM00849 Metallo-beta-lactamase superfamily BAS4882 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BAS4882 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BAS4895 SM00530 Helix-turn-helix XRE-family like proteins BAS4900 SM00448 cheY-homologous receiver domain BAS4900 SM00862 Transcriptional regulatory protein, C terminal BAS4901 SM00387 Histidine kinase-like ATPases BAS4901 SM00388 His Kinase A (phosphoacceptor) domain BAS4905 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BAS4905 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BAS4909 SM00347 helix_turn_helix multiple antibiotic resistance protein BAS4929 SM01276 BAS4929 BAS4936 SM00363 S4 RNA-binding domain BAS4938 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain BAS4939 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BAS4949 SM00382 ATPases associated with a variety of cellular activities BAS4954 SM00448 cheY-homologous receiver domain BAS4954 SM00862 Transcriptional regulatory protein, C terminal BAS4956 SM00316 Ribosomal protein S1-like RNA-binding domain BAS4956 SM00357 Cold shock protein domain BAS4956 SM00955 BAS4956 BAS4978 SM00507 HNH nucleases BAS4985 SM01192 BAS4985 BAS4985 SM01193 BAS4985 BAS4989 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BAS5008 SM00028 Tetratricopeptide repeats BAS5016 SM00487 DEAD-like helicases superfamily BAS5016 SM00490 helicase superfamily c-terminal domain BAS5020 SM00422 helix_turn_helix, mercury resistance BAS5023 SM00530 Helix-turn-helix XRE-family like proteins BAS5026 SM00422 helix_turn_helix, mercury resistance BAS5028 SM00382 ATPases associated with a variety of cellular activities BAS5030 SM00382 ATPases associated with a variety of cellular activities BAS5032 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BAS5032 SM00245 tail specific protease BAS5034 SM00382 ATPases associated with a variety of cellular activities BAS5037 SM00937 BAS5037 BAS5038 SM00957 SecA DEAD-like domain BAS5038 SM00958 SecA preprotein cross-linking domain BAS5040 SM00357 Cold shock protein domain BAS5042 SM00487 DEAD-like helicases superfamily BAS5042 SM00490 helicase superfamily c-terminal domain BAS5049 SM00984 UDP binding domain BAS5052 SM00382 ATPases associated with a variety of cellular activities BAS5053 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. BAS5083 SM00287 Bacterial SH3 domain homologues BAS5084 SM00287 Bacterial SH3 domain homologues BAS5090 SM00287 Bacterial SH3 domain homologues BAS5096 SM00487 DEAD-like helicases superfamily BAS5096 SM00490 helicase superfamily c-terminal domain BAS5105 SM00382 ATPases associated with a variety of cellular activities BAS5107 SM00530 Helix-turn-helix XRE-family like proteins BAS5112 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BAS5112 SM00387 Histidine kinase-like ATPases BAS5112 SM00388 His Kinase A (phosphoacceptor) domain BAS5113 SM00448 cheY-homologous receiver domain BAS5113 SM00862 Transcriptional regulatory protein, C terminal BAS5118 SM00287 Bacterial SH3 domain homologues BAS5118 SM00382 ATPases associated with a variety of cellular activities BAS5120 SM00984 UDP binding domain BAS5133 SM00382 ATPases associated with a variety of cellular activities BAS5134 SM00850 LytTr DNA-binding domain BAS5151 SM00052 Putative diguanylate phosphodiesterase BAS5151 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BAS5151 SM00091 PAS domain BAS5151 SM00267 diguanylate cyclase BAS5155 SM00382 ATPases associated with a variety of cellular activities BAS5168 SM00226 Low molecular weight phosphatase family BAS5171 SM00903 Flavin reductase like domain BAS5178 SM00937 BAS5178 BAS5181 SM00357 Cold shock protein domain BAS5181 SM00382 ATPases associated with a variety of cellular activities BAS5181 SM00959 Rho termination factor, N-terminal domain BAS5185 SM00448 cheY-homologous receiver domain BAS5195 SM00155 Phospholipase D. Active site motifs. BAS5197 SM00052 Putative diguanylate phosphodiesterase BAS5197 SM00267 diguanylate cyclase BAS5199 SM00530 Helix-turn-helix XRE-family like proteins BAS5200 SM00421 helix_turn_helix, Lux Regulon BAS5200 SM00448 cheY-homologous receiver domain BAS5201 SM00387 Histidine kinase-like ATPases BAS5203 SM00382 ATPases associated with a variety of cellular activities BAS5213 SM00836 DALR anticodon binding domain BAS5213 SM01016 Arginyl tRNA synthetase N terminal dom BAS5221 SM00422 helix_turn_helix, mercury resistance BAS5228 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BAS5230 SM00382 ATPases associated with a variety of cellular activities BAS5240 SM00936 Penicillin-binding protein 5, C-terminal domain BAS5250 SM00986 Uracil DNA glycosylase superfamily BAS5250 SM00987 UreE urease accessory protein, C-terminal domain BAS5252 SM00382 ATPases associated with a variety of cellular activities BAS5254 SM00354 helix_turn _helix lactose operon repressor BAS5261 SM00100 Cyclic nucleotide-monophosphate binding domain BAS5263 SM00421 helix_turn_helix, Lux Regulon BAS5263 SM00448 cheY-homologous receiver domain BAS5265 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BAS5267 SM00267 diguanylate cyclase BAS5270 SM00448 cheY-homologous receiver domain BAS5270 SM00850 LytTr DNA-binding domain BAS5276 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BAS5281 SM00382 ATPases associated with a variety of cellular activities BAS5295 SM00448 cheY-homologous receiver domain BAS5295 SM00850 LytTr DNA-binding domain BAS5296 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BAS5296 SM00387 Histidine kinase-like ATPases BAS5307 SM00487 DEAD-like helicases superfamily BAS5307 SM00490 helicase superfamily c-terminal domain BAS5309 SM01240 BAS5309 BAS5314 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BAS5315 SM00849 Metallo-beta-lactamase superfamily BAS5318 SM00091 PAS domain BAS5318 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BAS5318 SM00387 Histidine kinase-like ATPases BAS5318 SM00388 His Kinase A (phosphoacceptor) domain BAS5319 SM00448 cheY-homologous receiver domain BAS5319 SM00862 Transcriptional regulatory protein, C terminal BAS5320 SM00788 Adenylosuccinate synthetase BAS5323 SM00267 diguanylate cyclase BAS5332 SM00470 ParB-like nuclease domain BAS5334 SM00470 ParB-like nuclease domain BAS5336 SM01228 BAS5336 BAS5338 SM00393 Putative single-stranded nucleic acids-binding domain BAS5338 SM01245 BAS5338