AS53_1009 SM00382 ATPases associated with a variety of cellular activities AS53_1010 SM00387 Histidine kinase-like ATPases AS53_1010 SM00388 His Kinase A (phosphoacceptor) domain AS53_1011 SM00448 cheY-homologous receiver domain AS53_1011 SM00862 Transcriptional regulatory protein, C terminal AS53_1014 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AS53_1018 SM00382 ATPases associated with a variety of cellular activities AS53_1022 SM00725 NEAr Transporter domain AS53_1023 SM00725 NEAr Transporter domain AS53_1024 SM00725 NEAr Transporter domain AS53_1026 SM00363 S4 RNA-binding domain AS53_1028 SM00463 Small MutS-related domain AS53_1028 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AS53_1028 SM00534 ATPase domain of DNA mismatch repair MUTS family AS53_1029 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AS53_1029 SM00481 DNA polymerase alpha chain like domain AS53_1029 SM00483 DNA polymerase X family AS53_103 SM01230 AS53_103 AS53_1037 SM00873 B3/4 domain AS53_1037 SM00874 tRNA synthetase B5 domain AS53_1037 SM00896 Ferredoxin-fold anticodon binding domain AS53_1039 SM00967 RNA 2'-O ribose methyltransferase substrate binding AS53_104 SM00422 helix_turn_helix, mercury resistance AS53_1054 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AS53_1056 SM00382 ATPases associated with a variety of cellular activities AS53_1061 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AS53_1064 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AS53_1064 SM01232 AS53_1064 AS53_1065 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AS53_1065 SM00474 3'-5' exonuclease AS53_1065 SM00475 5'-3' exonuclease AS53_1065 SM00482 DNA polymerase A domain AS53_1066 SM00091 PAS domain AS53_1066 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS53_1066 SM00387 Histidine kinase-like ATPases AS53_1066 SM00388 His Kinase A (phosphoacceptor) domain AS53_1067 SM00448 cheY-homologous receiver domain AS53_1067 SM00862 Transcriptional regulatory protein, C terminal AS53_1071 SM01329 AS53_1071 AS53_1080 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS53_1081 SM00919 Malic enzyme, NAD binding domain AS53_1081 SM01274 AS53_1081 AS53_1082 SM00481 DNA polymerase alpha chain like domain AS53_1089 SM00116 Domain in cystathionine beta-synthase and other proteins. AS53_109 SM00382 ATPases associated with a variety of cellular activities AS53_1091 SM00849 Metallo-beta-lactamase superfamily AS53_1102 SM00530 Helix-turn-helix XRE-family like proteins AS53_1104 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AS53_1104 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AS53_1129 SM00981 AS53_1129 AS53_1138 SM00363 S4 RNA-binding domain AS53_1138 SM01390 AS53_1138 AS53_1141 SM00363 S4 RNA-binding domain AS53_1147 SM00116 Domain in cystathionine beta-synthase and other proteins. AS53_1150 SM00448 cheY-homologous receiver domain AS53_1150 SM00862 Transcriptional regulatory protein, C terminal AS53_1151 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS53_1151 SM00387 Histidine kinase-like ATPases AS53_1151 SM00388 His Kinase A (phosphoacceptor) domain AS53_1152 SM00248 ankyrin repeats AS53_1159 SM00354 helix_turn _helix lactose operon repressor AS53_116 SM00287 Bacterial SH3 domain homologues AS53_1170 SM00843 AS53_1170 AS53_1178 SM00849 Metallo-beta-lactamase superfamily AS53_1182 SM00642 Alpha-amylase domain AS53_1186 SM00420 helix_turn_helix, Deoxyribose operon repressor AS53_1187 SM00363 S4 RNA-binding domain AS53_119 SM00420 helix_turn_helix, Deoxyribose operon repressor AS53_119 SM01134 AS53_119 AS53_1191 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS53_1196 SM01058 CarD-like/TRCF domain AS53_12 SM00644 AS53_12 AS53_1203 SM00852 Probable molybdopterin binding domain AS53_1206 SM00729 Elongator protein 3, MiaB family, Radical SAM AS53_1210 SM00450 Rhodanese Homology Domain AS53_1225 SM00382 ATPases associated with a variety of cellular activities AS53_1229 SM00729 Elongator protein 3, MiaB family, Radical SAM AS53_1231 SM00382 ATPases associated with a variety of cellular activities AS53_1239 SM00014 Acid phosphatase homologues AS53_1242 SM00852 Probable molybdopterin binding domain AS53_1253 SM00387 Histidine kinase-like ATPases AS53_1254 SM00387 Histidine kinase-like ATPases AS53_1254 SM00388 His Kinase A (phosphoacceptor) domain AS53_126 SM00636 AS53_126 AS53_1261 SM00382 ATPases associated with a variety of cellular activities AS53_1273 SM00947 Carbonic anhydrase AS53_1274 SM01234 AS53_1274 AS53_1278 SM00894 Excalibur calcium-binding domain AS53_1290 SM00899 AS53_1290 AS53_1292 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS53_1292 SM00387 Histidine kinase-like ATPases AS53_1292 SM00388 His Kinase A (phosphoacceptor) domain AS53_1293 SM00448 cheY-homologous receiver domain AS53_1293 SM00862 Transcriptional regulatory protein, C terminal AS53_1299 SM00046 Diacylglycerol kinase catalytic domain (presumed) AS53_130 SM00411 bacterial (prokaryotic) histone like domain AS53_1309 SM00382 ATPases associated with a variety of cellular activities AS53_1310 SM00342 helix_turn_helix, arabinose operon control protein AS53_1310 SM00871 Bacterial transcription activator, effector binding domain AS53_1311 SM00448 cheY-homologous receiver domain AS53_1311 SM00862 Transcriptional regulatory protein, C terminal AS53_1312 SM00387 Histidine kinase-like ATPases AS53_1317 SM00382 ATPases associated with a variety of cellular activities AS53_1322 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS53_1322 SM00866 AS53_1322 AS53_1330 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS53_1330 SM00387 Histidine kinase-like ATPases AS53_1330 SM00388 His Kinase A (phosphoacceptor) domain AS53_1331 SM00448 cheY-homologous receiver domain AS53_1331 SM00862 Transcriptional regulatory protein, C terminal AS53_1332 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AS53_1340 SM00357 Cold shock protein domain AS53_1348 SM00642 Alpha-amylase domain AS53_136 SM00382 ATPases associated with a variety of cellular activities AS53_1397 SM00316 Ribosomal protein S1-like RNA-binding domain AS53_1399 SM00344 helix_turn_helix ASNC type AS53_1406 SM01298 AS53_1406 AS53_1407 SM00479 AS53_1407 AS53_142 SM00342 helix_turn_helix, arabinose operon control protein AS53_1426 SM00871 Bacterial transcription activator, effector binding domain AS53_1436 SM00382 ATPases associated with a variety of cellular activities AS53_144 SM00478 endonuclease III AS53_1441 SM00860 SMI1 / KNR4 family AS53_1454 SM00420 helix_turn_helix, Deoxyribose operon repressor AS53_1461 SM00422 helix_turn_helix, mercury resistance AS53_1464 SM00855 Phosphoglycerate mutase family AS53_1466 SM00729 Elongator protein 3, MiaB family, Radical SAM AS53_1477 SM00382 ATPases associated with a variety of cellular activities AS53_1481 SM00382 ATPases associated with a variety of cellular activities AS53_1481 SM00930 AS53_1481 AS53_1484 SM00493 AS53_1484 AS53_15 SM00382 ATPases associated with a variety of cellular activities AS53_1501 SM00849 Metallo-beta-lactamase superfamily AS53_151 SM00052 Putative diguanylate phosphodiesterase AS53_151 SM00091 PAS domain AS53_151 SM00267 diguanylate cyclase AS53_1510 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AS53_1510 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS53_1524 SM00530 Helix-turn-helix XRE-family like proteins AS53_1529 SM00448 cheY-homologous receiver domain AS53_1529 SM00862 Transcriptional regulatory protein, C terminal AS53_1530 SM00387 Histidine kinase-like ATPases AS53_1530 SM00388 His Kinase A (phosphoacceptor) domain AS53_1535 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AS53_1535 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS53_1539 SM00347 helix_turn_helix multiple antibiotic resistance protein AS53_1559 SM01276 AS53_1559 AS53_156 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS53_1566 SM00363 S4 RNA-binding domain AS53_1568 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain AS53_1569 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AS53_1579 SM00382 ATPases associated with a variety of cellular activities AS53_1583 SM00448 cheY-homologous receiver domain AS53_1583 SM00862 Transcriptional regulatory protein, C terminal AS53_1585 SM00316 Ribosomal protein S1-like RNA-binding domain AS53_1585 SM00357 Cold shock protein domain AS53_1585 SM00955 AS53_1585 AS53_16 SM00382 ATPases associated with a variety of cellular activities AS53_160 SM00148 Phospholipase C, catalytic domain (part); domain X AS53_1614 SM01192 AS53_1614 AS53_1614 SM01193 AS53_1614 AS53_1618 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AS53_162 SM00257 Lysin motif AS53_1638 SM00028 Tetratricopeptide repeats AS53_1646 SM00487 DEAD-like helicases superfamily AS53_1646 SM00490 helicase superfamily c-terminal domain AS53_1650 SM00422 helix_turn_helix, mercury resistance AS53_1653 SM00530 Helix-turn-helix XRE-family like proteins AS53_1656 SM00422 helix_turn_helix, mercury resistance AS53_1658 SM00382 ATPases associated with a variety of cellular activities AS53_1660 SM00382 ATPases associated with a variety of cellular activities AS53_1662 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AS53_1662 SM00245 tail specific protease AS53_1664 SM00382 ATPases associated with a variety of cellular activities AS53_1666 SM00937 AS53_1666 AS53_1667 SM00957 SecA DEAD-like domain AS53_1667 SM00958 SecA preprotein cross-linking domain AS53_1669 SM00357 Cold shock protein domain AS53_1671 SM00487 DEAD-like helicases superfamily AS53_1671 SM00490 helicase superfamily c-terminal domain AS53_1678 SM00984 UDP binding domain AS53_1681 SM00382 ATPases associated with a variety of cellular activities AS53_1682 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. AS53_169 SM00387 Histidine kinase-like ATPases AS53_169 SM00388 His Kinase A (phosphoacceptor) domain AS53_170 SM00448 cheY-homologous receiver domain AS53_170 SM00862 Transcriptional regulatory protein, C terminal AS53_1712 SM00287 Bacterial SH3 domain homologues AS53_1713 SM00287 Bacterial SH3 domain homologues AS53_1719 SM00287 Bacterial SH3 domain homologues AS53_1725 SM00487 DEAD-like helicases superfamily AS53_1725 SM00490 helicase superfamily c-terminal domain AS53_173 SM00382 ATPases associated with a variety of cellular activities AS53_1734 SM00382 ATPases associated with a variety of cellular activities AS53_1736 SM00530 Helix-turn-helix XRE-family like proteins AS53_174 SM00853 MutL C terminal dimerisation domain AS53_174 SM01340 AS53_174 AS53_1741 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS53_1741 SM00387 Histidine kinase-like ATPases AS53_1741 SM00388 His Kinase A (phosphoacceptor) domain AS53_1742 SM00448 cheY-homologous receiver domain AS53_1742 SM00862 Transcriptional regulatory protein, C terminal AS53_175 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AS53_175 SM00534 ATPase domain of DNA mismatch repair MUTS family AS53_1750 SM00984 UDP binding domain AS53_1762 SM00382 ATPases associated with a variety of cellular activities AS53_1763 SM00850 LytTr DNA-binding domain AS53_178 SM00729 Elongator protein 3, MiaB family, Radical SAM AS53_1780 SM00052 Putative diguanylate phosphodiesterase AS53_1780 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AS53_1780 SM00091 PAS domain AS53_1780 SM00267 diguanylate cyclase AS53_1784 SM00382 ATPases associated with a variety of cellular activities AS53_1797 SM00226 Low molecular weight phosphatase family AS53_1800 SM00903 Flavin reductase like domain AS53_1807 SM00937 AS53_1807 AS53_1810 SM00357 Cold shock protein domain AS53_1810 SM00382 ATPases associated with a variety of cellular activities AS53_1810 SM00959 Rho termination factor, N-terminal domain AS53_1814 SM00448 cheY-homologous receiver domain AS53_1824 SM00155 Phospholipase D. Active site motifs. AS53_1826 SM00052 Putative diguanylate phosphodiesterase AS53_1826 SM00267 diguanylate cyclase AS53_1829 SM00530 Helix-turn-helix XRE-family like proteins AS53_1830 SM00421 helix_turn_helix, Lux Regulon AS53_1830 SM00448 cheY-homologous receiver domain AS53_1831 SM00387 Histidine kinase-like ATPases AS53_1833 SM00382 ATPases associated with a variety of cellular activities AS53_184 SM00322 K homology RNA-binding domain AS53_184 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AS53_1843 SM00836 DALR anticodon binding domain AS53_1843 SM01016 Arginyl tRNA synthetase N terminal dom AS53_1851 SM00422 helix_turn_helix, mercury resistance AS53_1857 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AS53_1859 SM00382 ATPases associated with a variety of cellular activities AS53_186 SM00382 ATPases associated with a variety of cellular activities AS53_1869 SM00936 Penicillin-binding protein 5, C-terminal domain AS53_187 SM00852 Probable molybdopterin binding domain AS53_1878 SM00986 Uracil DNA glycosylase superfamily AS53_1878 SM00987 UreE urease accessory protein, C-terminal domain AS53_1880 SM00382 ATPases associated with a variety of cellular activities AS53_1882 SM00354 helix_turn _helix lactose operon repressor AS53_1889 SM00100 Cyclic nucleotide-monophosphate binding domain AS53_1891 SM00421 helix_turn_helix, Lux Regulon AS53_1891 SM00448 cheY-homologous receiver domain AS53_1893 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AS53_1895 SM00267 diguanylate cyclase AS53_1898 SM00448 cheY-homologous receiver domain AS53_1898 SM00850 LytTr DNA-binding domain AS53_19 SM00861 Transketolase, pyrimidine binding domain AS53_1904 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AS53_1910 SM00382 ATPases associated with a variety of cellular activities AS53_1922 SM00448 cheY-homologous receiver domain AS53_1922 SM00850 LytTr DNA-binding domain AS53_1923 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AS53_1923 SM00387 Histidine kinase-like ATPases AS53_1934 SM00487 DEAD-like helicases superfamily AS53_1934 SM00490 helicase superfamily c-terminal domain AS53_1936 SM01240 AS53_1936 AS53_1942 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AS53_1943 SM00849 Metallo-beta-lactamase superfamily AS53_1946 SM00091 PAS domain AS53_1946 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS53_1946 SM00387 Histidine kinase-like ATPases AS53_1946 SM00388 His Kinase A (phosphoacceptor) domain AS53_1947 SM00448 cheY-homologous receiver domain AS53_1947 SM00862 Transcriptional regulatory protein, C terminal AS53_1952 SM00788 Adenylosuccinate synthetase AS53_1955 SM00267 diguanylate cyclase AS53_1964 SM00470 ParB-like nuclease domain AS53_1966 SM00470 ParB-like nuclease domain AS53_1968 SM01228 AS53_1968 AS53_1970 SM00393 Putative single-stranded nucleic acids-binding domain AS53_1970 SM01245 AS53_1970 AS53_1974 SM00382 ATPases associated with a variety of cellular activities AS53_1974 SM00760 Bacterial dnaA protein helix-turn-helix domain AS53_1975 SM00480 DNA polymerase III beta subunit AS53_1978 SM00387 Histidine kinase-like ATPases AS53_1978 SM00433 TopoisomeraseII AS53_1979 SM00434 DNA Topoisomerase IV AS53_198 SM00382 ATPases associated with a variety of cellular activities AS53_1985 SM00116 Domain in cystathionine beta-synthase and other proteins. AS53_1985 SM01240 AS53_1985 AS53_1986 SM00936 Penicillin-binding protein 5, C-terminal domain AS53_1996 SM00382 ATPases associated with a variety of cellular activities AS53_1998 SM00493 AS53_1998 AS53_200 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS53_200 SM00866 AS53_200 AS53_201 SM00382 ATPases associated with a variety of cellular activities AS53_201 SM00843 AS53_201 AS53_2015 SM00966 SpoVT / AbrB like domain AS53_2019 SM00493 AS53_2019 AS53_2020 SM00650 Ribosomal RNA adenine dimethylases AS53_2029 SM01400 AS53_2029 AS53_2032 SM00487 DEAD-like helicases superfamily AS53_2032 SM00490 helicase superfamily c-terminal domain AS53_2032 SM00982 AS53_2032 AS53_2032 SM01058 CarD-like/TRCF domain AS53_2033 SM00966 SpoVT / AbrB like domain AS53_2036 SM00363 S4 RNA-binding domain AS53_204 SM00849 Metallo-beta-lactamase superfamily AS53_2040 SM00316 Ribosomal protein S1-like RNA-binding domain AS53_2044 SM00331 Sigma factor PP2C-like phosphatases AS53_2045 SM00977 TilS substrate C-terminal domain AS53_2047 SM00382 ATPases associated with a variety of cellular activities AS53_205 SM01130 AS53_205 AS53_2055 SM00905 Dihydroneopterin aldolase AS53_2057 SM00530 Helix-turn-helix XRE-family like proteins AS53_2066 SM00382 ATPases associated with a variety of cellular activities AS53_2066 SM01086 C-terminal, D2-small domain, of ClpB protein AS53_2067 SM00382 ATPases associated with a variety of cellular activities AS53_2069 SM00670 Large family of predicted nucleotide-binding domains AS53_207 SM00859 Semialdehyde dehydrogenase, NAD binding domain AS53_2074 SM00840 AS53_2074 AS53_2075 SM00535 Ribonuclease III family AS53_2076 SM00967 RNA 2'-O ribose methyltransferase substrate binding AS53_2078 SM00421 helix_turn_helix, Lux Regulon AS53_2080 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AS53_2081 SM00649 Ribosomal protein L11/L12 AS53_2087 SM00663 RNA polymerase I subunit A N-terminus AS53_2092 SM00838 Elongation factor G C-terminus AS53_2092 SM00889 Elongation factor G, domain IV AS53_2094 SM01403 AS53_2094 AS53_2098 SM01382 AS53_2098 AS53_2098 SM01383 AS53_2098 AS53_2101 SM00322 K homology RNA-binding domain AS53_2105 SM01374 AS53_2105 AS53_2106 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AS53_2118 SM00316 Ribosomal protein S1-like RNA-binding domain AS53_2122 SM00662 RNA polymerases D AS53_2124 SM00382 ATPases associated with a variety of cellular activities AS53_2125 SM00382 ATPases associated with a variety of cellular activities AS53_213 SM00316 Ribosomal protein S1-like RNA-binding domain AS53_213 SM00322 K homology RNA-binding domain AS53_2131 SM00646 AS53_2131 AS53_2134 SM01251 AS53_2134 AS53_214 SM01387 AS53_214 AS53_215 SM00904 Riboflavin kinase AS53_2158 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS53_2158 SM00895 AS53_2158 AS53_2162 SM01350 AS53_2162 AS53_2173 SM00382 ATPases associated with a variety of cellular activities AS53_2173 SM00930 AS53_2173 AS53_2175 SM00829 Enoylreductase AS53_2185 SM00382 ATPases associated with a variety of cellular activities AS53_2186 SM00382 ATPases associated with a variety of cellular activities AS53_2189 SM00342 helix_turn_helix, arabinose operon control protein AS53_2208 SM00563 Phosphate acyltransferases AS53_2210 SM00354 helix_turn _helix lactose operon repressor AS53_222 SM00316 Ribosomal protein S1-like RNA-binding domain AS53_222 SM00322 K homology RNA-binding domain AS53_2220 SM00382 ATPases associated with a variety of cellular activities AS53_2226 SM00382 ATPases associated with a variety of cellular activities AS53_2227 SM00382 ATPases associated with a variety of cellular activities AS53_224 SM00479 AS53_224 AS53_224 SM00481 DNA polymerase alpha chain like domain AS53_2241 SM00487 DEAD-like helicases superfamily AS53_2241 SM00490 helicase superfamily c-terminal domain AS53_2246 SM01005 Alanine racemase, C-terminal domain AS53_2249 SM00316 Ribosomal protein S1-like RNA-binding domain AS53_2249 SM00732 Likely ribonuclease with RNase H fold. AS53_2250 SM00731 SprT homologues. AS53_226 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AS53_2272 SM00382 ATPases associated with a variety of cellular activities AS53_2273 SM00881 CoA binding domain AS53_2276 SM00883 Chaperonin 10 Kd subunit AS53_2280 SM00448 cheY-homologous receiver domain AS53_2280 SM00862 Transcriptional regulatory protein, C terminal AS53_2281 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS53_2281 SM00387 Histidine kinase-like ATPases AS53_2281 SM00388 His Kinase A (phosphoacceptor) domain AS53_23 SM00382 ATPases associated with a variety of cellular activities AS53_2302 SM00382 ATPases associated with a variety of cellular activities AS53_2303 SM00387 Histidine kinase-like ATPases AS53_2303 SM00388 His Kinase A (phosphoacceptor) domain AS53_2304 SM00448 cheY-homologous receiver domain AS53_2304 SM00862 Transcriptional regulatory protein, C terminal AS53_2309 SM01001 AIR carboxylase AS53_2311 SM00998 Adenylosuccinate lyase C-terminus AS53_2314 SM01211 AS53_2314 AS53_2319 SM00798 AICARFT/IMPCHase bienzyme AS53_2319 SM00851 MGS-like domain AS53_2320 SM01209 AS53_2320 AS53_2320 SM01210 AS53_2320 AS53_2322 SM00244 prohibitin homologues AS53_2326 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AS53_2326 SM00292 breast cancer carboxy-terminal domain AS53_2326 SM00532 Ligase N family AS53_2332 SM00382 ATPases associated with a variety of cellular activities AS53_2332 SM00930 AS53_2332 AS53_2339 SM00347 helix_turn_helix multiple antibiotic resistance protein AS53_2343 SM00845 GatB domain AS53_2344 SM00046 Diacylglycerol kinase catalytic domain (presumed) AS53_2347 SM00382 ATPases associated with a variety of cellular activities AS53_235 SM00382 ATPases associated with a variety of cellular activities AS53_235 SM01086 C-terminal, D2-small domain, of ClpB protein AS53_2360 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AS53_2369 SM01007 Class II Aldolase and Adducin N-terminal domain AS53_239 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AS53_239 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AS53_239 SM00493 AS53_239 AS53_2390 SM00062 Bacterial periplasmic substrate-binding proteins AS53_2390 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AS53_2391 SM00382 ATPases associated with a variety of cellular activities AS53_2392 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AS53_2392 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS53_2393 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AS53_2393 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS53_2394 SM00642 Alpha-amylase domain AS53_2398 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AS53_2398 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AS53_2398 SM00493 AS53_2398 AS53_24 SM00062 Bacterial periplasmic substrate-binding proteins AS53_2402 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AS53_2402 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS53_2406 SM00382 ATPases associated with a variety of cellular activities AS53_2407 SM00382 ATPases associated with a variety of cellular activities AS53_2408 SM00060 Fibronectin type 3 domain AS53_2408 SM00636 AS53_2408 AS53_2408 SM00637 AS53_2408 AS53_241 SM00881 CoA binding domain AS53_2414 SM00530 Helix-turn-helix XRE-family like proteins AS53_2419 SM00946 Prolyl-tRNA synthetase, C-terminal AS53_2428 SM00831 Cation transporter/ATPase, N-terminus AS53_2430 SM00226 Low molecular weight phosphatase family AS53_2450 SM00478 endonuclease III AS53_2456 SM00530 Helix-turn-helix XRE-family like proteins AS53_2463 SM00382 ATPases associated with a variety of cellular activities AS53_251 SM00382 ATPases associated with a variety of cellular activities AS53_251 SM00962 SRP54-type protein, GTPase domain AS53_251 SM00963 SRP54-type protein, helical bundle domain AS53_2512 SM00382 ATPases associated with a variety of cellular activities AS53_2516 SM00530 Helix-turn-helix XRE-family like proteins AS53_2527 SM00984 UDP binding domain AS53_253 SM00382 ATPases associated with a variety of cellular activities AS53_253 SM00962 SRP54-type protein, GTPase domain AS53_253 SM00963 SRP54-type protein, helical bundle domain AS53_254 SM00968 SMC proteins Flexible Hinge Domain AS53_2543 SM00478 endonuclease III AS53_2543 SM00525 AS53_2543 AS53_2548 SM00382 ATPases associated with a variety of cellular activities AS53_255 SM00358 Double-stranded RNA binding motif AS53_255 SM00535 Ribonuclease III family AS53_2552 SM00382 ATPases associated with a variety of cellular activities AS53_257 SM00822 AS53_257 AS53_258 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AS53_2585 SM00567 E-Z type HEAT repeats AS53_2588 SM00052 Putative diguanylate phosphodiesterase AS53_2588 SM00091 PAS domain AS53_2588 SM00267 diguanylate cyclase AS53_2590 SM00763 PrkA AAA domain AS53_2592 SM00364 Leucine-rich repeats, bacterial type AS53_2592 SM00365 Leucine-rich repeat, SDS22-like subfamily AS53_2592 SM00369 Leucine-rich repeats, typical (most populated) subfamily AS53_2592 SM00725 NEAr Transporter domain AS53_2595 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AS53_2597 SM00244 prohibitin homologues AS53_2598 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AS53_2598 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS53_2599 SM00091 PAS domain AS53_2599 SM00387 Histidine kinase-like ATPases AS53_2600 SM00448 cheY-homologous receiver domain AS53_2604 SM00248 ankyrin repeats AS53_2606 SM00382 ATPases associated with a variety of cellular activities AS53_261 SM00487 DEAD-like helicases superfamily AS53_261 SM00490 helicase superfamily c-terminal domain AS53_2611 SM00448 cheY-homologous receiver domain AS53_2611 SM00862 Transcriptional regulatory protein, C terminal AS53_2612 SM00387 Histidine kinase-like ATPases AS53_2612 SM00388 His Kinase A (phosphoacceptor) domain AS53_2615 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AS53_2615 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS53_2619 SM00448 cheY-homologous receiver domain AS53_262 SM01120 AS53_262 AS53_262 SM01121 AS53_262 AS53_2621 SM00919 Malic enzyme, NAD binding domain AS53_2621 SM01274 AS53_2621 AS53_2624 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS53_2628 SM00448 cheY-homologous receiver domain AS53_2628 SM00862 Transcriptional regulatory protein, C terminal AS53_2632 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AS53_2632 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AS53_2636 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AS53_2636 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AS53_2638 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS53_2642 SM00028 Tetratricopeptide repeats AS53_2642 SM00530 Helix-turn-helix XRE-family like proteins AS53_265 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain AS53_2655 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS53_2661 SM00382 ATPases associated with a variety of cellular activities AS53_2666 SM00327 von Willebrand factor (vWF) type A domain AS53_2667 SM00382 ATPases associated with a variety of cellular activities AS53_2668 SM00155 Phospholipase D. Active site motifs. AS53_2671 SM00052 Putative diguanylate phosphodiesterase AS53_2671 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AS53_2671 SM00091 PAS domain AS53_2671 SM00267 diguanylate cyclase AS53_2673 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS53_2673 SM00866 AS53_2673 AS53_2675 SM00642 Alpha-amylase domain AS53_268 SM00220 Serine/Threonine protein kinases, catalytic domain AS53_268 SM00740 AS53_268 AS53_2682 SM00382 ATPases associated with a variety of cellular activities AS53_2683 SM00062 Bacterial periplasmic substrate-binding proteins AS53_2683 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AS53_269 SM00331 Sigma factor PP2C-like phosphatases AS53_269 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AS53_2693 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS53_2693 SM00387 Histidine kinase-like ATPases AS53_2693 SM00388 His Kinase A (phosphoacceptor) domain AS53_2694 SM00448 cheY-homologous receiver domain AS53_2694 SM00862 Transcriptional regulatory protein, C terminal AS53_2702 SM00382 ATPases associated with a variety of cellular activities AS53_2703 SM00382 ATPases associated with a variety of cellular activities AS53_2705 SM00347 helix_turn_helix multiple antibiotic resistance protein AS53_2708 SM00354 helix_turn _helix lactose operon repressor AS53_2711 SM00382 ATPases associated with a variety of cellular activities AS53_2718 SM00829 Enoylreductase AS53_2720 SM00770 Zinc dependent phospholipase C (alpha toxin) AS53_2727 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AS53_2729 SM00530 Helix-turn-helix XRE-family like proteins AS53_2738 SM00530 Helix-turn-helix XRE-family like proteins AS53_274 SM00487 DEAD-like helicases superfamily AS53_274 SM00490 helicase superfamily c-terminal domain AS53_2756 SM00899 AS53_2756 AS53_276 SM01409 AS53_276 AS53_277 SM00072 Guanylate kinase homologues. AS53_2775 SM00116 Domain in cystathionine beta-synthase and other proteins. AS53_2778 SM00287 Bacterial SH3 domain homologues AS53_2780 SM00382 ATPases associated with a variety of cellular activities AS53_2797 SM00347 helix_turn_helix multiple antibiotic resistance protein AS53_28 SM00857 Resolvase, N terminal domain AS53_280 SM00831 Cation transporter/ATPase, N-terminus AS53_2806 SM00640 Glycosyl hydrolases family 32 AS53_2808 SM00354 helix_turn _helix lactose operon repressor AS53_2822 SM00347 helix_turn_helix multiple antibiotic resistance protein AS53_2825 SM00450 Rhodanese Homology Domain AS53_2827 SM00450 Rhodanese Homology Domain AS53_2828 SM00450 Rhodanese Homology Domain AS53_2828 SM00849 Metallo-beta-lactamase superfamily AS53_2832 SM00450 Rhodanese Homology Domain AS53_2837 SM00829 Enoylreductase AS53_2847 SM00287 Bacterial SH3 domain homologues AS53_2849 SM00382 ATPases associated with a variety of cellular activities AS53_2860 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen AS53_2879 SM00344 helix_turn_helix ASNC type AS53_289 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AS53_2892 SM01060 AS53_2892 AS53_2898 SM00382 ATPases associated with a variety of cellular activities AS53_2900 SM00382 ATPases associated with a variety of cellular activities AS53_2901 SM00062 Bacterial periplasmic substrate-binding proteins AS53_2901 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AS53_2903 SM00382 ATPases associated with a variety of cellular activities AS53_2918 SM00644 AS53_2918 AS53_292 SM00851 MGS-like domain AS53_292 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AS53_292 SM01209 AS53_292 AS53_2920 SM00729 Elongator protein 3, MiaB family, Radical SAM AS53_2927 SM00957 SecA DEAD-like domain AS53_2927 SM00958 SecA preprotein cross-linking domain AS53_293 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AS53_2930 SM00635 Bacterial Ig-like domain 2 AS53_2941 SM00646 AS53_2941 AS53_2955 SM00382 ATPases associated with a variety of cellular activities AS53_2960 SM00860 SMI1 / KNR4 family AS53_2961 SM00860 SMI1 / KNR4 family AS53_2963 SM00091 PAS domain AS53_2963 SM00387 Histidine kinase-like ATPases AS53_2964 SM00448 cheY-homologous receiver domain AS53_2970 SM00422 helix_turn_helix, mercury resistance AS53_298 SM00363 S4 RNA-binding domain AS53_2995 SM00347 helix_turn_helix multiple antibiotic resistance protein AS53_3002 SM01120 AS53_3002 AS53_3009 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AS53_3014 SM00460 Transglutaminase/protease-like homologues AS53_3026 SM00331 Sigma factor PP2C-like phosphatases AS53_3026 SM00448 cheY-homologous receiver domain AS53_3027 SM00138 Methyltransferase, chemotaxis proteins AS53_3028 SM00387 Histidine kinase-like ATPases AS53_3028 SM00388 His Kinase A (phosphoacceptor) domain AS53_3028 SM00448 cheY-homologous receiver domain AS53_303 SM00363 S4 RNA-binding domain AS53_3035 SM00829 Enoylreductase AS53_3043 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AS53_3049 SM00028 Tetratricopeptide repeats AS53_3054 SM00530 Helix-turn-helix XRE-family like proteins AS53_3064 SM00347 helix_turn_helix multiple antibiotic resistance protein AS53_3074 SM00347 helix_turn_helix multiple antibiotic resistance protein AS53_3077 SM00382 ATPases associated with a variety of cellular activities AS53_3093 SM00422 helix_turn_helix, mercury resistance AS53_3115 SM00354 helix_turn _helix lactose operon repressor AS53_3117 SM00849 Metallo-beta-lactamase superfamily AS53_312 SM00864 Tubulin/FtsZ family, GTPase domain AS53_312 SM00865 Tubulin/FtsZ family, C-terminal domain AS53_3122 SM00725 NEAr Transporter domain AS53_313 SM00842 Cell division protein FtsA AS53_3134 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AS53_3137 SM00342 helix_turn_helix, arabinose operon control protein AS53_3137 SM00871 Bacterial transcription activator, effector binding domain AS53_3140 SM00387 Histidine kinase-like ATPases AS53_3140 SM00388 His Kinase A (phosphoacceptor) domain AS53_3141 SM00448 cheY-homologous receiver domain AS53_3141 SM00862 Transcriptional regulatory protein, C terminal AS53_3147 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AS53_3147 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS53_3155 SM00357 Cold shock protein domain AS53_3177 SM01060 AS53_3177 AS53_3179 SM00642 Alpha-amylase domain AS53_3180 SM00530 Helix-turn-helix XRE-family like proteins AS53_3182 SM00316 Ribosomal protein S1-like RNA-binding domain AS53_3191 SM00382 ATPases associated with a variety of cellular activities AS53_3191 SM01086 C-terminal, D2-small domain, of ClpB protein AS53_3197 SM00825 Beta-ketoacyl synthase AS53_3205 SM00382 ATPases associated with a variety of cellular activities AS53_3206 SM00382 ATPases associated with a variety of cellular activities AS53_321 SM00740 AS53_321 AS53_3213 SM00155 Phospholipase D. Active site motifs. AS53_3219 SM01118 AS53_3219 AS53_322 SM00740 AS53_322 AS53_3221 SM00954 Region found in RelA / SpoT proteins AS53_3253 SM00635 Bacterial Ig-like domain 2 AS53_3275 SM00861 Transketolase, pyrimidine binding domain AS53_3276 SM00530 Helix-turn-helix XRE-family like proteins AS53_328 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains AS53_3294 SM00530 Helix-turn-helix XRE-family like proteins AS53_3297 SM00382 ATPases associated with a variety of cellular activities AS53_3301 SM00014 Acid phosphatase homologues AS53_3311 SM00448 cheY-homologous receiver domain AS53_3311 SM00862 Transcriptional regulatory protein, C terminal AS53_3312 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS53_3312 SM00387 Histidine kinase-like ATPases AS53_3312 SM00388 His Kinase A (phosphoacceptor) domain AS53_3313 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS53_3313 SM00895 AS53_3313 AS53_3327 SM00822 AS53_3327 AS53_3342 SM00420 helix_turn_helix, Deoxyribose operon repressor AS53_3342 SM01134 AS53_3342 AS53_3346 SM00365 Leucine-rich repeat, SDS22-like subfamily AS53_3346 SM00369 Leucine-rich repeats, typical (most populated) subfamily AS53_3352 SM00387 Histidine kinase-like ATPases AS53_3352 SM00388 His Kinase A (phosphoacceptor) domain AS53_3353 SM00347 helix_turn_helix multiple antibiotic resistance protein AS53_3357 SM00387 Histidine kinase-like ATPases AS53_3357 SM00388 His Kinase A (phosphoacceptor) domain AS53_336 SM00530 Helix-turn-helix XRE-family like proteins AS53_3370 SM00465 GIY-YIG type nucleases (URI domain) AS53_3370 SM00496 Intron-encoded nuclease repeat 2 AS53_3373 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS53_3374 SM00382 ATPases associated with a variety of cellular activities AS53_3376 SM00382 ATPases associated with a variety of cellular activities AS53_3380 SM00344 helix_turn_helix ASNC type AS53_339 SM00644 AS53_339 AS53_34 SM00028 Tetratricopeptide repeats AS53_3404 SM00347 helix_turn_helix multiple antibiotic resistance protein AS53_3418 SM00917 LeuA allosteric (dimerisation) domain AS53_3419 SM01329 AS53_3419 AS53_3455 SM00387 Histidine kinase-like ATPases AS53_3456 SM00421 helix_turn_helix, Lux Regulon AS53_3456 SM00448 cheY-homologous receiver domain AS53_3474 SM00091 PAS domain AS53_3474 SM00387 Histidine kinase-like ATPases AS53_3474 SM00388 His Kinase A (phosphoacceptor) domain AS53_3478 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS53_3478 SM00387 Histidine kinase-like ATPases AS53_3478 SM00388 His Kinase A (phosphoacceptor) domain AS53_3489 SM00363 S4 RNA-binding domain AS53_3493 SM00448 cheY-homologous receiver domain AS53_3493 SM00862 Transcriptional regulatory protein, C terminal AS53_3494 SM00091 PAS domain AS53_3494 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS53_3494 SM00387 Histidine kinase-like ATPases AS53_3494 SM00388 His Kinase A (phosphoacceptor) domain AS53_3496 SM00257 Lysin motif AS53_3501 SM00487 DEAD-like helicases superfamily AS53_3501 SM00490 helicase superfamily c-terminal domain AS53_3503 SM00257 Lysin motif AS53_3505 SM00422 helix_turn_helix, mercury resistance AS53_3507 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AS53_3510 SM00644 AS53_3510 AS53_3512 SM00870 AS53_3512 AS53_3515 SM00316 Ribosomal protein S1-like RNA-binding domain AS53_3516 SM01240 AS53_3516 AS53_3527 SM00411 bacterial (prokaryotic) histone like domain AS53_3532 SM00562 AS53_3532 AS53_3536 SM00028 Tetratricopeptide repeats AS53_3537 SM00914 AS53_3537 AS53_3546 SM00986 Uracil DNA glycosylase superfamily AS53_3546 SM00987 UreE urease accessory protein, C-terminal domain AS53_3550 SM00851 MGS-like domain AS53_3559 SM00479 AS53_3559 AS53_3559 SM00487 DEAD-like helicases superfamily AS53_3559 SM00491 AS53_3559 AS53_3564 SM00478 endonuclease III AS53_3564 SM00525 AS53_3564 AS53_3566 SM00060 Fibronectin type 3 domain AS53_3577 SM00981 AS53_3577 AS53_3579 SM00491 AS53_3579 AS53_3592 SM00450 Rhodanese Homology Domain AS53_3598 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AS53_3598 SM00475 5'-3' exonuclease AS53_361 SM00507 HNH nucleases AS53_3622 SM00357 Cold shock protein domain AS53_3632 SM00849 Metallo-beta-lactamase superfamily AS53_3633 SM00422 helix_turn_helix, mercury resistance AS53_3633 SM00871 Bacterial transcription activator, effector binding domain AS53_3651 SM00448 cheY-homologous receiver domain AS53_3652 SM00073 Histidine Phosphotransfer domain AS53_3653 SM00260 Two component signalling adaptor domain AS53_3653 SM00387 Histidine kinase-like ATPases AS53_3653 SM01231 AS53_3653 AS53_3657 SM00138 Methyltransferase, chemotaxis proteins AS53_3674 SM00382 ATPases associated with a variety of cellular activities AS53_3683 SM00260 Two component signalling adaptor domain AS53_3683 SM00448 cheY-homologous receiver domain AS53_3689 SM00028 Tetratricopeptide repeats AS53_3692 SM00028 Tetratricopeptide repeats AS53_370 SM00530 Helix-turn-helix XRE-family like proteins AS53_3707 SM00382 ATPases associated with a variety of cellular activities AS53_3707 SM00962 SRP54-type protein, GTPase domain AS53_3709 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AS53_3720 SM00530 Helix-turn-helix XRE-family like proteins AS53_3724 SM00382 ATPases associated with a variety of cellular activities AS53_3727 SM00849 Metallo-beta-lactamase superfamily AS53_3727 SM01027 Beta-Casp domain AS53_3731 SM00835 Cupin AS53_3734 SM00855 Phosphoglycerate mutase family AS53_3747 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS53_3747 SM00895 AS53_3747 AS53_3749 SM00833 Cobalamin synthesis protein cobW C-terminal domain AS53_3768 SM00530 Helix-turn-helix XRE-family like proteins AS53_3777 SM00421 helix_turn_helix, Lux Regulon AS53_3777 SM00448 cheY-homologous receiver domain AS53_3779 SM00382 ATPases associated with a variety of cellular activities AS53_3782 SM00155 Phospholipase D. Active site motifs. AS53_3786 SM00919 Malic enzyme, NAD binding domain AS53_3786 SM01274 AS53_3786 AS53_3787 SM00387 Histidine kinase-like ATPases AS53_3788 SM00448 cheY-homologous receiver domain AS53_3789 SM00487 DEAD-like helicases superfamily AS53_3789 SM00490 helicase superfamily c-terminal domain AS53_3801 SM00646 AS53_3801 AS53_3802 SM00047 Lysozyme subfamily 2 AS53_3839 SM00854 Bacterial capsule synthesis protein PGA_cap AS53_384 SM00382 ATPases associated with a variety of cellular activities AS53_3845 SM00850 LytTr DNA-binding domain AS53_3856 SM00729 Elongator protein 3, MiaB family, Radical SAM AS53_3858 SM00448 cheY-homologous receiver domain AS53_3858 SM00862 Transcriptional regulatory protein, C terminal AS53_3859 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS53_3860 SM00387 Histidine kinase-like ATPases AS53_3860 SM00388 His Kinase A (phosphoacceptor) domain AS53_3863 SM00450 Rhodanese Homology Domain AS53_3874 SM01133 AS53_3874 AS53_3876 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AS53_3882 SM01011 Aminopeptidase P, N-terminal domain AS53_3884 SM00287 Bacterial SH3 domain homologues AS53_3886 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AS53_3886 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AS53_3886 SM00493 AS53_3886 AS53_389 SM00530 Helix-turn-helix XRE-family like proteins AS53_390 SM00530 Helix-turn-helix XRE-family like proteins AS53_3906 SM00833 Cobalamin synthesis protein cobW C-terminal domain AS53_3913 SM00382 ATPases associated with a variety of cellular activities AS53_3914 SM00382 ATPases associated with a variety of cellular activities AS53_3921 SM00347 helix_turn_helix multiple antibiotic resistance protein AS53_3925 SM00382 ATPases associated with a variety of cellular activities AS53_3926 SM00382 ATPases associated with a variety of cellular activities AS53_3932 SM00287 Bacterial SH3 domain homologues AS53_3935 SM00382 ATPases associated with a variety of cellular activities AS53_3936 SM00448 cheY-homologous receiver domain AS53_3936 SM00862 Transcriptional regulatory protein, C terminal AS53_3937 SM00387 Histidine kinase-like ATPases AS53_3937 SM00388 His Kinase A (phosphoacceptor) domain AS53_394 SM00530 Helix-turn-helix XRE-family like proteins AS53_3953 SM00448 cheY-homologous receiver domain AS53_3953 SM00862 Transcriptional regulatory protein, C terminal AS53_3954 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS53_3954 SM00387 Histidine kinase-like ATPases AS53_3954 SM00388 His Kinase A (phosphoacceptor) domain AS53_3973 SM00460 Transglutaminase/protease-like homologues AS53_3979 SM00966 SpoVT / AbrB like domain AS53_3981 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS53_3988 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AS53_3988 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS53_40 SM00287 Bacterial SH3 domain homologues AS53_40 SM00644 AS53_40 AS53_400 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AS53_4000 SM00833 Cobalamin synthesis protein cobW C-terminal domain AS53_4020 SM00855 Phosphoglycerate mutase family AS53_4030 SM00155 Phospholipase D. Active site motifs. AS53_4035 SM01091 Transporter associated domain AS53_4050 SM00244 prohibitin homologues AS53_4051 SM00855 Phosphoglycerate mutase family AS53_4054 SM01005 Alanine racemase, C-terminal domain AS53_4060 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS53_4083 SM00487 DEAD-like helicases superfamily AS53_4083 SM00490 helicase superfamily c-terminal domain AS53_4087 SM00829 Enoylreductase AS53_409 SM00855 Phosphoglycerate mutase family AS53_4091 SM00849 Metallo-beta-lactamase superfamily AS53_4094 SM00460 Transglutaminase/protease-like homologues AS53_4099 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AS53_4103 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS53_4104 SM00382 ATPases associated with a variety of cellular activities AS53_4106 SM00100 Cyclic nucleotide-monophosphate binding domain AS53_4106 SM00419 helix_turn_helix, cAMP Regulatory protein AS53_4107 SM00729 Elongator protein 3, MiaB family, Radical SAM AS53_4109 SM00852 Probable molybdopterin binding domain AS53_4122 SM00894 Excalibur calcium-binding domain AS53_4133 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AS53_4134 SM00382 ATPases associated with a variety of cellular activities AS53_4141 SM00567 E-Z type HEAT repeats AS53_4141 SM00932 Scaffold protein Nfu/NifU N terminal AS53_4145 SM00836 DALR anticodon binding domain AS53_4145 SM01016 Arginyl tRNA synthetase N terminal dom AS53_4149 SM00028 Tetratricopeptide repeats AS53_4150 SM00028 Tetratricopeptide repeats AS53_4156 SM00327 von Willebrand factor (vWF) type A domain AS53_4159 SM00382 ATPases associated with a variety of cellular activities AS53_4162 SM00028 Tetratricopeptide repeats AS53_4169 SM00857 Resolvase, N terminal domain AS53_4180 SM00448 cheY-homologous receiver domain AS53_4180 SM00862 Transcriptional regulatory protein, C terminal AS53_4181 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS53_4181 SM00387 Histidine kinase-like ATPases AS53_4181 SM00388 His Kinase A (phosphoacceptor) domain AS53_4197 SM00382 ATPases associated with a variety of cellular activities AS53_4209 SM00563 Phosphate acyltransferases AS53_422 SM00878 Biotin carboxylase C-terminal domain AS53_4231 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AS53_4232 SM00421 helix_turn_helix, Lux Regulon AS53_4232 SM00448 cheY-homologous receiver domain AS53_4235 SM00829 Enoylreductase AS53_4249 SM00382 ATPases associated with a variety of cellular activities AS53_4257 SM01091 Transporter associated domain AS53_426 SM00670 Large family of predicted nucleotide-binding domains AS53_4260 SM00387 Histidine kinase-like ATPases AS53_4260 SM00388 His Kinase A (phosphoacceptor) domain AS53_4263 SM00882 Coenzyme A transferase AS53_4264 SM00882 Coenzyme A transferase AS53_4267 SM00382 ATPases associated with a variety of cellular activities AS53_4275 SM00219 Tyrosine kinase, catalytic domain AS53_4278 SM00014 Acid phosphatase homologues AS53_4280 SM00860 SMI1 / KNR4 family AS53_4285 SM00530 Helix-turn-helix XRE-family like proteins AS53_4296 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. AS53_431 SM00838 Elongation factor G C-terminus AS53_4324 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS53_4331 SM00823 Phosphopantetheine attachment site AS53_4331 SM00824 Thioesterase AS53_4332 SM00923 MbtH-like protein AS53_4336 SM00411 bacterial (prokaryotic) histone like domain AS53_4344 SM00363 S4 RNA-binding domain AS53_4345 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AS53_4358 SM00849 Metallo-beta-lactamase superfamily AS53_4364 SM00849 Metallo-beta-lactamase superfamily AS53_4368 SM01059 Chloramphenicol acetyltransferase AS53_4373 SM00530 Helix-turn-helix XRE-family like proteins AS53_4381 SM00357 Cold shock protein domain AS53_4394 SM00859 Semialdehyde dehydrogenase, NAD binding domain AS53_4401 SM00382 ATPases associated with a variety of cellular activities AS53_4402 SM00382 ATPases associated with a variety of cellular activities AS53_4404 SM00646 AS53_4404 AS53_4406 SM00530 Helix-turn-helix XRE-family like proteins AS53_4422 SM01207 AS53_4422 AS53_4426 SM00849 Metallo-beta-lactamase superfamily AS53_4429 SM00487 DEAD-like helicases superfamily AS53_4429 SM00490 helicase superfamily c-terminal domain AS53_4434 SM00382 ATPases associated with a variety of cellular activities AS53_4439 SM00347 helix_turn_helix multiple antibiotic resistance protein AS53_4440 SM00855 Phosphoglycerate mutase family AS53_4457 SM00014 Acid phosphatase homologues AS53_4458 SM00354 helix_turn _helix lactose operon repressor AS53_447 SM00861 Transketolase, pyrimidine binding domain AS53_4474 SM00530 Helix-turn-helix XRE-family like proteins AS53_4479 SM00646 AS53_4479 AS53_4483 SM00382 ATPases associated with a variety of cellular activities AS53_4485 SM00052 Putative diguanylate phosphodiesterase AS53_4485 SM00091 PAS domain AS53_4485 SM00267 diguanylate cyclase AS53_4487 SM00860 SMI1 / KNR4 family AS53_4489 SM00450 Rhodanese Homology Domain AS53_4489 SM00849 Metallo-beta-lactamase superfamily AS53_4492 SM00382 ATPases associated with a variety of cellular activities AS53_4498 SM00878 Biotin carboxylase C-terminal domain AS53_4510 SM00387 Histidine kinase-like ATPases AS53_4510 SM00388 His Kinase A (phosphoacceptor) domain AS53_4511 SM00448 cheY-homologous receiver domain AS53_4511 SM00862 Transcriptional regulatory protein, C terminal AS53_4523 SM00382 ATPases associated with a variety of cellular activities AS53_4527 SM00422 helix_turn_helix, mercury resistance AS53_4527 SM00871 Bacterial transcription activator, effector binding domain AS53_453 SM00849 Metallo-beta-lactamase superfamily AS53_4533 SM00342 helix_turn_helix, arabinose operon control protein AS53_4536 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS53_4547 SM00448 cheY-homologous receiver domain AS53_4547 SM00862 Transcriptional regulatory protein, C terminal AS53_4549 SM00387 Histidine kinase-like ATPases AS53_4551 SM00382 ATPases associated with a variety of cellular activities AS53_4554 SM00382 ATPases associated with a variety of cellular activities AS53_4561 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS53_4562 SM01209 AS53_4562 AS53_4588 SM00091 PAS domain AS53_4588 SM00387 Histidine kinase-like ATPases AS53_4588 SM00388 His Kinase A (phosphoacceptor) domain AS53_4593 SM00382 ATPases associated with a variety of cellular activities AS53_4596 SM00387 Histidine kinase-like ATPases AS53_4596 SM00388 His Kinase A (phosphoacceptor) domain AS53_4599 SM00829 Enoylreductase AS53_4600 SM00740 AS53_4600 AS53_4612 SM00422 helix_turn_helix, mercury resistance AS53_4621 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS53_4632 SM00480 DNA polymerase III beta subunit AS53_4654 SM00465 GIY-YIG type nucleases (URI domain) AS53_466 SM00052 Putative diguanylate phosphodiesterase AS53_4675 SM00642 Alpha-amylase domain AS53_4679 SM00871 Bacterial transcription activator, effector binding domain AS53_4683 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS53_4706 SM00382 ATPases associated with a variety of cellular activities AS53_4710 SM00420 helix_turn_helix, Deoxyribose operon repressor AS53_4710 SM01134 AS53_4710 AS53_4720 SM00861 Transketolase, pyrimidine binding domain AS53_4731 SM00116 Domain in cystathionine beta-synthase and other proteins. AS53_4731 SM00382 ATPases associated with a variety of cellular activities AS53_4738 SM00060 Fibronectin type 3 domain AS53_4738 SM00495 Chitin-binding domain type 3 AS53_474 SM00267 diguanylate cyclase AS53_4747 SM00849 Metallo-beta-lactamase superfamily AS53_4762 SM00341 Helicase and RNase D C-terminal AS53_4762 SM00487 DEAD-like helicases superfamily AS53_4762 SM00490 helicase superfamily c-terminal domain AS53_4762 SM00956 AS53_4762 AS53_4770 SM01131 AS53_4770 AS53_4776 SM01130 AS53_4776 AS53_4780 SM00091 PAS domain AS53_4780 SM00382 ATPases associated with a variety of cellular activities AS53_4793 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AS53_4801 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AS53_4802 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS53_4802 SM00387 Histidine kinase-like ATPases AS53_4802 SM00388 His Kinase A (phosphoacceptor) domain AS53_4803 SM00448 cheY-homologous receiver domain AS53_4803 SM00862 Transcriptional regulatory protein, C terminal AS53_483 SM00387 Histidine kinase-like ATPases AS53_483 SM00388 His Kinase A (phosphoacceptor) domain AS53_4841 SM00382 ATPases associated with a variety of cellular activities AS53_4843 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS53_4854 SM00062 Bacterial periplasmic substrate-binding proteins AS53_4855 SM00382 ATPases associated with a variety of cellular activities AS53_486 SM00354 helix_turn _helix lactose operon repressor AS53_4861 SM00028 Tetratricopeptide repeats AS53_4879 SM00382 ATPases associated with a variety of cellular activities AS53_4889 SM00830 Chorismate mutase type II AS53_4897 SM00287 Bacterial SH3 domain homologues AS53_490 SM00642 Alpha-amylase domain AS53_4908 SM00382 ATPases associated with a variety of cellular activities AS53_491 SM00642 Alpha-amylase domain AS53_4913 SM01133 AS53_4913 AS53_4919 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS53_492 SM00382 ATPases associated with a variety of cellular activities AS53_4923 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AS53_4926 SM00346 helix_turn_helix isocitrate lyase regulation AS53_4930 SM00098 Alkaline phosphatase homologues AS53_4932 SM00530 Helix-turn-helix XRE-family like proteins AS53_4937 SM00850 LytTr DNA-binding domain AS53_4957 SM01060 AS53_4957 AS53_4968 SM00347 helix_turn_helix multiple antibiotic resistance protein AS53_4969 SM00889 Elongation factor G, domain IV AS53_4974 SM00382 ATPases associated with a variety of cellular activities AS53_4975 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS53_4977 SM00382 ATPases associated with a variety of cellular activities AS53_4982 SM00342 helix_turn_helix, arabinose operon control protein AS53_4982 SM00871 Bacterial transcription activator, effector binding domain AS53_4987 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS53_499 SM00382 ATPases associated with a variety of cellular activities AS53_4991 SM00387 Histidine kinase-like ATPases AS53_4991 SM00388 His Kinase A (phosphoacceptor) domain AS53_4992 SM00448 cheY-homologous receiver domain AS53_4992 SM00862 Transcriptional regulatory protein, C terminal AS53_5019 SM00797 Allophanate hydrolase subunit 2 AS53_5020 SM00796 Allophanate hydrolase subunit 1 AS53_5021 SM00346 helix_turn_helix isocitrate lyase regulation AS53_5025 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS53_5038 SM00849 Metallo-beta-lactamase superfamily AS53_5056 SM00870 AS53_5056 AS53_5057 SM00530 Helix-turn-helix XRE-family like proteins AS53_5064 SM00919 Malic enzyme, NAD binding domain AS53_5064 SM01274 AS53_5064 AS53_5070 SM00448 cheY-homologous receiver domain AS53_5071 SM00387 Histidine kinase-like ATPases AS53_5082 SM01060 AS53_5082 AS53_5109 SM00382 ATPases associated with a variety of cellular activities AS53_5114 SM00226 Low molecular weight phosphatase family AS53_5117 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS53_5120 SM00028 Tetratricopeptide repeats AS53_5124 SM00344 helix_turn_helix ASNC type AS53_5137 SM00347 helix_turn_helix multiple antibiotic resistance protein AS53_5144 SM00448 cheY-homologous receiver domain AS53_5144 SM00862 Transcriptional regulatory protein, C terminal AS53_5145 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS53_5145 SM00387 Histidine kinase-like ATPases AS53_5145 SM00388 His Kinase A (phosphoacceptor) domain AS53_5156 SM00530 Helix-turn-helix XRE-family like proteins AS53_516 SM01007 Class II Aldolase and Adducin N-terminal domain AS53_5166 SM00382 ATPases associated with a variety of cellular activities AS53_5168 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS53_5170 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS53_5170 SM00387 Histidine kinase-like ATPases AS53_5170 SM00388 His Kinase A (phosphoacceptor) domain AS53_5171 SM00448 cheY-homologous receiver domain AS53_5171 SM00862 Transcriptional regulatory protein, C terminal AS53_5173 SM00347 helix_turn_helix multiple antibiotic resistance protein AS53_5192 SM00354 helix_turn _helix lactose operon repressor AS53_5193 SM00028 Tetratricopeptide repeats AS53_5200 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AS53_5200 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS53_5200 SM00319 Homologues of the ligand binding domain of Tar AS53_5205 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AS53_5211 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS53_5219 SM00344 helix_turn_helix ASNC type AS53_522 SM00267 diguanylate cyclase AS53_5231 SM00342 helix_turn_helix, arabinose operon control protein AS53_5234 SM00287 Bacterial SH3 domain homologues AS53_5244 SM00347 helix_turn_helix multiple antibiotic resistance protein AS53_5249 SM00382 ATPases associated with a variety of cellular activities AS53_5251 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS53_5264 SM00382 ATPases associated with a variety of cellular activities AS53_5273 SM00530 Helix-turn-helix XRE-family like proteins AS53_5274 SM01207 AS53_5274 AS53_5286 SM00382 ATPases associated with a variety of cellular activities AS53_5289 SM00530 Helix-turn-helix XRE-family like proteins AS53_529 SM01061 CAT RNA binding domain AS53_5301 SM01266 AS53_5301 AS53_5303 SM00382 ATPases associated with a variety of cellular activities AS53_531 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS53_531 SM00866 AS53_531 AS53_5314 SM00028 Tetratricopeptide repeats AS53_5319 SM01091 Transporter associated domain AS53_5320 SM00422 helix_turn_helix, mercury resistance AS53_5328 SM01350 AS53_5328 AS53_5329 SM00861 Transketolase, pyrimidine binding domain AS53_5332 SM00829 Enoylreductase AS53_5335 SM00829 Enoylreductase AS53_5338 SM01276 AS53_5338 AS53_534 SM00849 Metallo-beta-lactamase superfamily AS53_5347 SM00914 AS53_5347 AS53_5353 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS53_5353 SM00866 AS53_5353 AS53_5361 SM00849 Metallo-beta-lactamase superfamily AS53_5374 SM00248 ankyrin repeats AS53_5375 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS53_5376 SM00636 AS53_5376 AS53_5384 SM00871 Bacterial transcription activator, effector binding domain AS53_5388 SM00382 ATPases associated with a variety of cellular activities AS53_5394 SM00849 Metallo-beta-lactamase superfamily AS53_5395 SM00641 Glycosyl hydrolases family 25 AS53_5408 SM00849 Metallo-beta-lactamase superfamily AS53_5409 SM00829 Enoylreductase AS53_5434 SM00829 Enoylreductase AS53_5435 SM00855 Phosphoglycerate mutase family AS53_5437 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AS53_5437 SM00534 ATPase domain of DNA mismatch repair MUTS family AS53_5439 SM00642 Alpha-amylase domain AS53_5453 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS53_5454 SM00829 Enoylreductase AS53_5456 SM00028 Tetratricopeptide repeats AS53_5472 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AS53_5481 SM00479 AS53_5481 AS53_5482 SM00357 Cold shock protein domain AS53_5487 SM01022 AS53_5487 AS53_5509 SM00852 Probable molybdopterin binding domain AS53_5512 SM00729 Elongator protein 3, MiaB family, Radical SAM AS53_5517 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AS53_5517 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AS53_553 SM00387 Histidine kinase-like ATPases AS53_5538 SM00382 ATPases associated with a variety of cellular activities AS53_5541 SM00434 DNA Topoisomerase IV AS53_5542 SM00387 Histidine kinase-like ATPases AS53_5542 SM00433 TopoisomeraseII AS53_5543 SM00881 CoA binding domain AS53_5544 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AS53_5545 SM00448 cheY-homologous receiver domain AS53_5545 SM00862 Transcriptional regulatory protein, C terminal AS53_5548 SM01207 AS53_5548 AS53_555 SM00936 Penicillin-binding protein 5, C-terminal domain AS53_5551 SM00257 Lysin motif AS53_5551 SM00636 AS53_5551 AS53_5555 SM00479 AS53_5555 AS53_5558 SM00382 ATPases associated with a variety of cellular activities AS53_556 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS53_5566 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AS53_557 SM00382 ATPases associated with a variety of cellular activities AS53_5579 SM00644 AS53_5579 AS53_5579 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. AS53_5580 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AS53_5583 SM00091 PAS domain AS53_5583 SM00387 Histidine kinase-like ATPases AS53_5583 SM00388 His Kinase A (phosphoacceptor) domain AS53_5589 SM01058 CarD-like/TRCF domain AS53_560 SM00347 helix_turn_helix multiple antibiotic resistance protein AS53_5606 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AS53_5608 SM00318 Staphylococcal nuclease homologues AS53_5612 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS53_5615 SM00028 Tetratricopeptide repeats AS53_5621 SM00954 Region found in RelA / SpoT proteins AS53_5631 SM00860 SMI1 / KNR4 family AS53_564 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AS53_5650 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS53_5651 SM00758 AS53_5651 AS53_5656 SM00857 Resolvase, N terminal domain AS53_5683 SM00984 UDP binding domain AS53_5688 SM00014 Acid phosphatase homologues AS53_5693 SM00725 NEAr Transporter domain AS53_5742 SM00864 Tubulin/FtsZ family, GTPase domain AS53_5745 SM00843 AS53_5745 AS53_5748 SM00530 Helix-turn-helix XRE-family like proteins AS53_5774 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain AS53_5793 SM00487 DEAD-like helicases superfamily AS53_5794 SM00507 HNH nucleases AS53_5857 SM00646 AS53_5857 AS53_5870 SM00014 Acid phosphatase homologues AS53_5877 SM00854 Bacterial capsule synthesis protein PGA_cap AS53_588 SM00704 CDGSH-type zinc finger. Function unknown. AS53_5881 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS53_5911 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AS53_5912 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AS53_594 SM00729 Elongator protein 3, MiaB family, Radical SAM AS53_594 SM00876 Biotin and Thiamin Synthesis associated domain AS53_604 SM00347 helix_turn_helix multiple antibiotic resistance protein AS53_611 SM00859 Semialdehyde dehydrogenase, NAD binding domain AS53_619 SM00849 Metallo-beta-lactamase superfamily AS53_628 SM00382 ATPases associated with a variety of cellular activities AS53_630 SM00062 Bacterial periplasmic substrate-binding proteins AS53_630 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AS53_636 SM00861 Transketolase, pyrimidine binding domain AS53_640 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AS53_642 SM00091 PAS domain AS53_642 SM00382 ATPases associated with a variety of cellular activities AS53_647 SM00448 cheY-homologous receiver domain AS53_648 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AS53_651 SM00363 S4 RNA-binding domain AS53_652 SM00861 Transketolase, pyrimidine binding domain AS53_659 SM00878 Biotin carboxylase C-terminal domain AS53_669 SM00382 ATPases associated with a variety of cellular activities AS53_673 SM00841 Elongation factor P, C-terminal AS53_673 SM01185 AS53_673 AS53_680 SM00529 Helix-turn-helix diphteria tox regulatory element AS53_684 SM00450 Rhodanese Homology Domain AS53_685 SM00354 helix_turn _helix lactose operon repressor AS53_695 SM00382 ATPases associated with a variety of cellular activities AS53_696 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS53_702 SM00487 DEAD-like helicases superfamily AS53_702 SM00490 helicase superfamily c-terminal domain AS53_709 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AS53_71 SM00530 Helix-turn-helix XRE-family like proteins AS53_716 SM00382 ATPases associated with a variety of cellular activities AS53_727 SM01018 B12 binding domain AS53_732 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS53_734 SM00849 Metallo-beta-lactamase superfamily AS53_742 SM00382 ATPases associated with a variety of cellular activities AS53_755 SM00382 ATPases associated with a variety of cellular activities AS53_758 SM00518 AP endonuclease family 2 AS53_759 SM00487 DEAD-like helicases superfamily AS53_759 SM00490 helicase superfamily c-terminal domain AS53_766 SM00400 zinc finger AS53_766 SM00493 AS53_766 AS53_766 SM00766 DNA primase DnaG DnaB-binding AS53_768 SM00116 Domain in cystathionine beta-synthase and other proteins. AS53_775 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AS53_781 SM00729 Elongator protein 3, MiaB family, Radical SAM AS53_784 SM00271 DnaJ molecular chaperone homology domain AS53_788 SM00729 Elongator protein 3, MiaB family, Radical SAM AS53_790 SM00838 Elongation factor G C-terminus AS53_796 SM00849 Metallo-beta-lactamase superfamily AS53_798 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AS53_802 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AS53_804 SM01103 AS53_804 AS53_815 SM00954 Region found in RelA / SpoT proteins AS53_817 SM00098 Alkaline phosphatase homologues AS53_822 SM00855 Phosphoglycerate mutase family AS53_832 SM00530 Helix-turn-helix XRE-family like proteins AS53_837 SM00382 ATPases associated with a variety of cellular activities AS53_856 SM00732 Likely ribonuclease with RNase H fold. AS53_858 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AS53_865 SM00028 Tetratricopeptide repeats AS53_869 SM00382 ATPases associated with a variety of cellular activities AS53_87 SM00382 ATPases associated with a variety of cellular activities AS53_876 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AS53_876 SM00954 Region found in RelA / SpoT proteins AS53_885 SM01323 AS53_885 AS53_889 SM00382 ATPases associated with a variety of cellular activities AS53_890 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AS53_895 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS53_898 SM00257 Lysin motif AS53_908 SM00382 ATPases associated with a variety of cellular activities AS53_909 SM00387 Histidine kinase-like ATPases AS53_911 SM00448 cheY-homologous receiver domain AS53_911 SM00862 Transcriptional regulatory protein, C terminal AS53_913 SM01317 AS53_913 AS53_931 SM00257 Lysin motif AS53_933 SM01004 Delta-aminolevulinic acid dehydratase AS53_938 SM00347 helix_turn_helix multiple antibiotic resistance protein AS53_941 SM00382 ATPases associated with a variety of cellular activities AS53_941 SM00464 Found in ATP-dependent protease La (LON) AS53_942 SM00382 ATPases associated with a variety of cellular activities AS53_943 SM00382 ATPases associated with a variety of cellular activities AS53_943 SM00994 ClpX C4-type zinc finger AS53_943 SM01086 C-terminal, D2-small domain, of ClpB protein AS53_955 SM00909 Sporulation and spore germination AS53_962 SM00421 helix_turn_helix, Lux Regulon AS53_97 SM00530 Helix-turn-helix XRE-family like proteins AS53_970 SM00382 ATPases associated with a variety of cellular activities AS53_971 SM00382 ATPases associated with a variety of cellular activities AS53_973 SM00342 helix_turn_helix, arabinose operon control protein AS53_973 SM00448 cheY-homologous receiver domain AS53_977 SM00530 Helix-turn-helix XRE-family like proteins AS53_98 SM00530 Helix-turn-helix XRE-family like proteins AS53_982 SM00382 ATPases associated with a variety of cellular activities AS53_993 SM00465 GIY-YIG type nucleases (URI domain) AS53_995 SM00893 Electron transfer flavoprotein domain AS53_996 SM00893 Electron transfer flavoprotein domain