locus-tag class description DJ46_1 PF00733 Asparagine synthase DJ46_1 PF13537 Glutamine amidotransferase domain DJ46_10 PF00639 PPIC-type PPIASE domain DJ46_100 PF16870 2-oxoglutarate dehydrogenase C-terminal DJ46_100 PF00676 Dehydrogenase E1 component DJ46_100 PF02779 Transketolase, pyrimidine binding domain DJ46_1006 PF02595 Glycerate kinase family DJ46_1007 PF00939 Sodium:sulfate symporter transmembrane region DJ46_1008 PF00486 Transcriptional regulatory protein, C terminal DJ46_1008 PF00072 Response regulator receiver domain DJ46_1009 PF00672 HAMP domain DJ46_1009 PF00512 His Kinase A (phospho-acceptor) domain DJ46_1009 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_101 PF01381 Helix-turn-helix DJ46_1012 PF00209 Sodium:neurotransmitter symporter family DJ46_1015 PF10997 Alternate to MurJ DJ46_1019 PF00465 Iron-containing alcohol dehydrogenase DJ46_1020 PF01177 Asp/Glu/Hydantoin racemase DJ46_1021 PF01980 tRNA-methyltransferase O DJ46_1022 PF00583 Acetyltransferase (GNAT) family DJ46_1026 PF00005 ABC transporter DJ46_1027 PF05975 Bacterial ABC transporter protein EcsB DJ46_1028 PF14005 YpjP-like protein DJ46_1029 PF13419 Haloacid dehalogenase-like hydrolase DJ46_1033 PF07930 D-aminopeptidase, domain B DJ46_1033 PF00144 Beta-lactamase DJ46_1034 PF00303 Thymidylate synthase DJ46_1035 PF00186 Dihydrofolate reductase DJ46_1036 PF03717 Penicillin-binding Protein dimerisation domain DJ46_1036 PF00905 Penicillin binding protein transpeptidase domain DJ46_1036 PF05223 NTF2-like N-terminal transpeptidase domain DJ46_1037 PF02525 Flavodoxin-like fold DJ46_1038 PF01553 Acyltransferase DJ46_1039 PF03006 Haemolysin-III related DJ46_1040 PF02416 mttA/Hcf106 family DJ46_1041 PF00902 Sec-independent protein translocase protein (TatC) DJ46_1043 PF02645 Uncharacterised protein, DegV family COG1307 DJ46_1045 PF02630 SCO1/SenC DJ46_1046 PF00011 Hsp20/alpha crystallin family DJ46_1047 PF00733 Asparagine synthase DJ46_1047 PF13537 Glutamine amidotransferase domain DJ46_1051 PF01497 Periplasmic binding protein DJ46_1052 PF01063 Amino-transferase class IV DJ46_1053 PF00881 Nitroreductase family DJ46_1056 PF00857 Isochorismatase family DJ46_1057 PF00293 NUDIX domain DJ46_1058 PF00011 Hsp20/alpha crystallin family DJ46_1059 PF00924 Mechanosensitive ion channel DJ46_1060 PF07730 Histidine kinase DJ46_1060 PF13185 GAF domain DJ46_1061 PF00196 Bacterial regulatory proteins, luxR family DJ46_1061 PF00072 Response regulator receiver domain DJ46_1063 PF01380 SIS domain DJ46_1063 PF01418 Helix-turn-helix domain, rpiR family DJ46_1064 PF00107 Zinc-binding dehydrogenase DJ46_1064 PF08240 Alcohol dehydrogenase GroES-like domain DJ46_1067 PF00144 Beta-lactamase DJ46_1071 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DJ46_1071 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DJ46_1072 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DJ46_1072 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DJ46_1075 PF03358 NADPH-dependent FMN reductase DJ46_1078 PF00005 ABC transporter DJ46_1078 PF00571 CBS domain DJ46_1079 PF00528 Binding-protein-dependent transport system inner membrane component DJ46_1080 PF13520 Amino acid permease DJ46_1086 PF00571 CBS domain DJ46_1086 PF01595 Cyclin M transmembrane N-terminal domain DJ46_1086 PF03471 Transporter associated domain DJ46_1087 PF00171 Aldehyde dehydrogenase family DJ46_1088 PF07997 Protein of unknown function (DUF1694) DJ46_1089 PF09385 Histidine kinase N terminal DJ46_1091 PF00202 Aminotransferase class-III DJ46_1092 PF01144 Coenzyme A transferase DJ46_1093 PF01144 Coenzyme A transferase DJ46_1094 PF01546 Peptidase family M20/M25/M40 DJ46_1094 PF07687 Peptidase dimerisation domain DJ46_1095 PF00583 Acetyltransferase (GNAT) family DJ46_1096 PF00158 Sigma-54 interaction domain DJ46_1096 PF02954 Bacterial regulatory protein, Fis family DJ46_1096 PF13426 PAS domain DJ46_1097 PF12544 Lysine-2,3-aminomutase DJ46_1098 PF14122 YokU-like protein, putative antitoxin DJ46_1099 PF06855 YozE SAM-like fold DJ46_1102 PF14162 YozD-like protein DJ46_1105 PF07070 SpoOM protein DJ46_1106 PF01545 Cation efflux family DJ46_1106 PF16916 Dimerisation domain of Zinc Transporter DJ46_1107 PF01569 PAP2 superfamily DJ46_1108 PF00085 Thioredoxin DJ46_1110 PF04740 LXG domain of WXG superfamily DJ46_1110 PF14436 Bacterial EndoU nuclease DJ46_1111 PF00150 Cellulase (glycosyl hydrolase family 5) DJ46_1111 PF00395 S-layer homology domain DJ46_1111 PF03424 Carbohydrate binding domain (family 17/28) DJ46_1113 PF04471 Restriction endonuclease DJ46_112 PF13649 Methyltransferase domain DJ46_1133 PF10676 Spore germination protein gerPA/gerPF DJ46_1139 PF07690 Major Facilitator Superfamily DJ46_114 PF00768 D-alanyl-D-alanine carboxypeptidase DJ46_114 PF07943 Penicillin-binding protein 5, C-terminal domain DJ46_1140 PF01521 Iron-sulphur cluster biosynthesis DJ46_1141 PF00285 Citrate synthase, C-terminal domain DJ46_1142 PF03972 MmgE/PrpD family DJ46_1144 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DJ46_1144 PF02770 Acyl-CoA dehydrogenase, middle domain DJ46_1144 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DJ46_1145 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DJ46_1145 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DJ46_1146 PF00171 Aldehyde dehydrogenase family DJ46_1147 PF01810 LysE type translocator DJ46_1148 PF00378 Enoyl-CoA hydratase/isomerase DJ46_1150 PF10763 Protein of unknown function (DUF2584) DJ46_1151 PF00149 Calcineurin-like phosphoesterase DJ46_1151 PF12320 Type 5 capsule protein repressor C-terminal domain DJ46_1152 PF13476 AAA domain DJ46_1154 PF01022 Bacterial regulatory protein, arsR family DJ46_1156 PF07690 Major Facilitator Superfamily DJ46_1157 PF00106 short chain dehydrogenase DJ46_1158 PF00425 chorismate binding enzyme DJ46_1159 PF00501 AMP-binding enzyme DJ46_1159 PF13193 AMP-binding enzyme C-terminal domain DJ46_116 PF12389 Camelysin metallo-endopeptidase DJ46_1160 PF00857 Isochorismatase family DJ46_1160 PF00550 Phosphopantetheine attachment site DJ46_1161 PF00550 Phosphopantetheine attachment site DJ46_1161 PF00975 Thioesterase domain DJ46_1161 PF00668 Condensation domain DJ46_1161 PF13193 AMP-binding enzyme C-terminal domain DJ46_1161 PF00501 AMP-binding enzyme DJ46_1162 PF03621 MbtH-like protein DJ46_1163 PF07690 Major Facilitator Superfamily DJ46_1166 PF00216 Bacterial DNA-binding protein DJ46_1168 PF05163 DinB family DJ46_1169 PF00082 Subtilase family DJ46_1170 PF01235 Sodium:alanine symporter family DJ46_1173 PF16291 Domain of unknown function (DUF4937 DJ46_1174 PF01479 S4 domain DJ46_1174 PF00849 RNA pseudouridylate synthase DJ46_1175 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DJ46_1175 PF02824 TGS domain DJ46_1175 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DJ46_1175 PF03129 Anticodon binding domain DJ46_118 PF12389 Camelysin metallo-endopeptidase DJ46_1180 PF12146 Serine aminopeptidase, S33 DJ46_1181 PF07690 Major Facilitator Superfamily DJ46_1186 PF13649 Methyltransferase domain DJ46_119 PF08671 Anti-repressor SinI DJ46_119 PF01381 Helix-turn-helix DJ46_1195 PF16123 Hydroxyacylglutathione hydrolase C-terminus DJ46_1195 PF00753 Metallo-beta-lactamase superfamily DJ46_1197 PF03176 MMPL family DJ46_1199 PF00302 Chloramphenicol acetyltransferase DJ46_12 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DJ46_12 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DJ46_120 PF05547 Immune inhibitor A peptidase M6 DJ46_1202 PF00583 Acetyltransferase (GNAT) family DJ46_121 PF00171 Aldehyde dehydrogenase family DJ46_1210 PF13302 Acetyltransferase (GNAT) domain DJ46_1212 PF00313 'Cold-shock' DNA-binding domain DJ46_122 PF00005 ABC transporter DJ46_122 PF08402 TOBE domain DJ46_1224 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ46_1224 PF03466 LysR substrate binding domain DJ46_1225 PF02774 Semialdehyde dehydrogenase, dimerisation domain DJ46_1225 PF01118 Semialdehyde dehydrogenase, NAD binding domain DJ46_1228 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ46_1228 PF03466 LysR substrate binding domain DJ46_1229 PF03473 MOSC domain DJ46_1229 PF03475 3-alpha domain DJ46_123 PF00528 Binding-protein-dependent transport system inner membrane component DJ46_1232 PF00664 ABC transporter transmembrane region DJ46_1232 PF00005 ABC transporter DJ46_1233 PF00664 ABC transporter transmembrane region DJ46_1233 PF00005 ABC transporter DJ46_1236 PF01810 LysE type translocator DJ46_1237 PF01381 Helix-turn-helix DJ46_1237 PF07883 Cupin domain DJ46_124 PF00528 Binding-protein-dependent transport system inner membrane component DJ46_1241 PF00890 FAD binding domain DJ46_1242 PF04542 Sigma-70 region 2 DJ46_1242 PF12680 SnoaL-like domain DJ46_1242 PF08281 Sigma-70, region 4 DJ46_1247 PF02638 Glycosyl hydrolase-like 10 DJ46_1249 PF02378 Phosphotransferase system, EIIC DJ46_125 PF13416 Bacterial extracellular solute-binding protein DJ46_1251 PF03702 Anhydro-N-acetylmuramic acid kinase DJ46_1252 PF01869 BadF/BadG/BcrA/BcrD ATPase family DJ46_1253 PF02660 Glycerol-3-phosphate acyltransferase DJ46_1254 PF00266 Aminotransferase class-V DJ46_1255 PF00291 Pyridoxal-phosphate dependent enzyme DJ46_1257 PF16123 Hydroxyacylglutathione hydrolase C-terminus DJ46_1257 PF00753 Metallo-beta-lactamase superfamily DJ46_1260 PF00271 Helicase conserved C-terminal domain DJ46_1260 PF00270 DEAD/DEAH box helicase DJ46_1262 PF17932 Tetracyclin repressor-like, C-terminal domain DJ46_1262 PF00440 Bacterial regulatory proteins, tetR family DJ46_1265 PF00005 ABC transporter DJ46_1265 PF02687 FtsX-like permease family DJ46_1265 PF12704 MacB-like periplasmic core domain DJ46_1266 PF03848 Tellurite resistance protein TehB DJ46_1266 PF09313 Domain of unknown function (DUF1971) DJ46_1268 PF08241 Methyltransferase domain DJ46_1269 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DJ46_1269 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DJ46_1269 PF00205 Thiamine pyrophosphate enzyme, central domain DJ46_127 PF03176 MMPL family DJ46_1270 PF12802 MarR family DJ46_1271 PF00300 Histidine phosphatase superfamily (branch 1) DJ46_1272 PF14171 Toxin SpoIISA, type II toxin-antitoxin system DJ46_1278 PF01546 Peptidase family M20/M25/M40 DJ46_1278 PF07687 Peptidase dimerisation domain DJ46_1282 PF08281 Sigma-70, region 4 DJ46_1282 PF04542 Sigma-70 region 2 DJ46_1284 PF03717 Penicillin-binding Protein dimerisation domain DJ46_1284 PF00905 Penicillin binding protein transpeptidase domain DJ46_1288 PF01569 PAP2 superfamily DJ46_1289 PF00356 Bacterial regulatory proteins, lacI family DJ46_129 PF00849 RNA pseudouridylate synthase DJ46_129 PF01479 S4 domain DJ46_1290 PF07690 Major Facilitator Superfamily DJ46_1291 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DJ46_1291 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DJ46_1292 PF00294 pfkB family carbohydrate kinase DJ46_1293 PF00171 Aldehyde dehydrogenase family DJ46_1294 PF00205 Thiamine pyrophosphate enzyme, central domain DJ46_1294 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DJ46_1294 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DJ46_1295 PF01261 Xylose isomerase-like TIM barrel DJ46_1296 PF01116 Fructose-bisphosphate aldolase class-II DJ46_1297 PF04962 KduI/IolB family DJ46_13 PF12758 Protein of unknown function (DUF3813) DJ46_1301 PF00149 Calcineurin-like phosphoesterase DJ46_1301 PF02872 5'-nucleotidase, C-terminal domain DJ46_1302 PF02872 5'-nucleotidase, C-terminal domain DJ46_1302 PF00149 Calcineurin-like phosphoesterase DJ46_1304 PF18801 response regulator aspartate phosphatase H, N terminal DJ46_1305 PF01381 Helix-turn-helix DJ46_1308 PF02557 D-alanyl-D-alanine carboxypeptidase DJ46_131 PF00188 Cysteine-rich secretory protein family DJ46_1310 PF00395 S-layer homology domain DJ46_1310 PF01520 N-acetylmuramoyl-L-alanine amidase DJ46_1313 PF00440 Bacterial regulatory proteins, tetR family DJ46_1316 PF00563 EAL domain DJ46_1316 PF00990 Diguanylate cyclase, GGDEF domain DJ46_1316 PF03707 Bacterial signalling protein N terminal repeat DJ46_1317 PF13302 Acetyltransferase (GNAT) domain DJ46_1319 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ46_132 PF13183 4Fe-4S dicluster domain DJ46_132 PF02754 Cysteine-rich domain DJ46_1320 PF00581 Rhodanese-like domain DJ46_1323 PF00005 ABC transporter DJ46_1328 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DJ46_1328 PF02770 Acyl-CoA dehydrogenase, middle domain DJ46_1328 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DJ46_1329 PF00289 Biotin carboxylase, N-terminal domain DJ46_1329 PF02785 Biotin carboxylase C-terminal domain DJ46_1329 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DJ46_133 PF01565 FAD binding domain DJ46_133 PF02913 FAD linked oxidases, C-terminal domain DJ46_1330 PF00364 Biotin-requiring enzyme DJ46_1331 PF00682 HMGL-like DJ46_1332 PF00378 Enoyl-CoA hydratase/isomerase DJ46_1333 PF01039 Carboxyl transferase domain DJ46_1334 PF13193 AMP-binding enzyme C-terminal domain DJ46_1334 PF16177 Acetyl-coenzyme A synthetase N-terminus DJ46_1334 PF00501 AMP-binding enzyme DJ46_1336 PF00583 Acetyltransferase (GNAT) family DJ46_1337 PF00485 Phosphoribulokinase / Uridine kinase family DJ46_1339 PF05163 DinB family DJ46_134 PF13556 PucR C-terminal helix-turn-helix domain DJ46_134 PF17853 GGDEF-like domain DJ46_134 PF05651 Putative sugar diacid recognition DJ46_1340 PF07943 Penicillin-binding protein 5, C-terminal domain DJ46_1340 PF00768 D-alanyl-D-alanine carboxypeptidase DJ46_1341 PF00512 His Kinase A (phospho-acceptor) domain DJ46_1341 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_1342 PF00486 Transcriptional regulatory protein, C terminal DJ46_1342 PF00072 Response regulator receiver domain DJ46_1343 PF01966 HD domain DJ46_1344 PF13021 Domain of unknown function (DUF3885) DJ46_1345 PF01048 Phosphorylase superfamily DJ46_1349 PF03413 Peptidase propeptide and YPEB domain DJ46_1349 PF01447 Thermolysin metallopeptidase, catalytic domain DJ46_1349 PF02868 Thermolysin metallopeptidase, alpha-helical domain DJ46_1349 PF07504 Fungalysin/Thermolysin Propeptide Motif DJ46_1350 PF02868 Thermolysin metallopeptidase, alpha-helical domain DJ46_1350 PF01447 Thermolysin metallopeptidase, catalytic domain DJ46_1350 PF03413 Peptidase propeptide and YPEB domain DJ46_1350 PF07504 Fungalysin/Thermolysin Propeptide Motif DJ46_1354 PF17760 UvrA interaction domain DJ46_1354 PF17755 UvrA DNA-binding domain DJ46_1354 PF17755 UvrA DNA-binding domain DJ46_1354 PF17760 UvrA interaction domain DJ46_1357 PF00144 Beta-lactamase DJ46_1358 PF09278 MerR, DNA binding DJ46_1358 PF00376 MerR family regulatory protein DJ46_1359 PF07690 Major Facilitator Superfamily DJ46_136 PF00486 Transcriptional regulatory protein, C terminal DJ46_136 PF00072 Response regulator receiver domain DJ46_1363 PF01636 Phosphotransferase enzyme family DJ46_1364 PF12833 Helix-turn-helix domain DJ46_1367 PF00392 Bacterial regulatory proteins, gntR family DJ46_1367 PF00155 Aminotransferase class I and II DJ46_1369 PF00107 Zinc-binding dehydrogenase DJ46_1369 PF08240 Alcohol dehydrogenase GroES-like domain DJ46_137 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_137 PF18698 Histidine kinase sensor domain DJ46_137 PF00989 PAS fold DJ46_137 PF00672 HAMP domain DJ46_137 PF00512 His Kinase A (phospho-acceptor) domain DJ46_1372 PF01225 Mur ligase family, catalytic domain DJ46_1372 PF02875 Mur ligase family, glutamate ligase domain DJ46_1372 PF08245 Mur ligase middle domain DJ46_1373 PF02875 Mur ligase family, glutamate ligase domain DJ46_1373 PF01225 Mur ligase family, catalytic domain DJ46_1373 PF08245 Mur ligase middle domain DJ46_1376 PF07486 Cell Wall Hydrolase DJ46_1378 PF00072 Response regulator receiver domain DJ46_1378 PF00486 Transcriptional regulatory protein, C terminal DJ46_138 PF07729 FCD domain DJ46_138 PF00392 Bacterial regulatory proteins, gntR family DJ46_1380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_1385 PF00005 ABC transporter DJ46_1386 PF02687 FtsX-like permease family DJ46_1387 PF02687 FtsX-like permease family DJ46_139 PF02754 Cysteine-rich domain DJ46_1391 PF03447 Homoserine dehydrogenase, NAD binding domain DJ46_1391 PF01842 ACT domain DJ46_1391 PF00742 Homoserine dehydrogenase DJ46_1392 PF00392 Bacterial regulatory proteins, gntR family DJ46_1392 PF00155 Aminotransferase class I and II DJ46_1393 PF07478 D-ala D-ala ligase C-terminus DJ46_1393 PF01820 D-ala D-ala ligase N-terminus DJ46_1394 PF03070 TENA/THI-4/PQQC family DJ46_140 PF02589 LUD domain DJ46_140 PF13183 4Fe-4S dicluster domain DJ46_140 PF11870 Domain of unknown function (DUF3390) DJ46_141 PF02589 LUD domain DJ46_1410 PF00067 Cytochrome P450 DJ46_1412 PF00132 Bacterial transferase hexapeptide (six repeats) DJ46_1413 PF07561 Domain of Unknown Function (DUF1540) DJ46_1415 PF00067 Cytochrome P450 DJ46_1419 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_1419 PF13426 PAS domain DJ46_1419 PF13188 PAS domain DJ46_1419 PF00512 His Kinase A (phospho-acceptor) domain DJ46_1419 PF00989 PAS fold DJ46_142 PF01478 Type IV leader peptidase family DJ46_142 PF06750 Bacterial Peptidase A24 N-terminal domain DJ46_1421 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase DJ46_1422 PF01177 Asp/Glu/Hydantoin racemase DJ46_1423 PF07155 ECF-type riboflavin transporter, S component DJ46_1424 PF00005 ABC transporter DJ46_1424 PF12558 ATP-binding cassette cobalt transporter DJ46_1427 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_1427 PF00512 His Kinase A (phospho-acceptor) domain DJ46_1430 PF08240 Alcohol dehydrogenase GroES-like domain DJ46_1430 PF00107 Zinc-binding dehydrogenase DJ46_1433 PF11954 Domain of unknown function (DUF3471) DJ46_1433 PF00144 Beta-lactamase DJ46_1439 PF01965 DJ-1/PfpI family DJ46_144 PF01226 Formate/nitrite transporter DJ46_1442 PF00144 Beta-lactamase DJ46_1444 PF07690 Major Facilitator Superfamily DJ46_1448 PF03009 Glycerophosphoryl diester phosphodiesterase family DJ46_145 PF03741 Integral membrane protein TerC family DJ46_1451 PF00392 Bacterial regulatory proteins, gntR family DJ46_1451 PF00155 Aminotransferase class I and II DJ46_1452 PF00392 Bacterial regulatory proteins, gntR family DJ46_1452 PF00155 Aminotransferase class I and II DJ46_1453 PF00892 EamA-like transporter family DJ46_1454 PF01270 Glycosyl hydrolases family 8 DJ46_1456 PF00293 NUDIX domain DJ46_1460 PF07690 Major Facilitator Superfamily DJ46_1462 PF00293 NUDIX domain DJ46_1462 PF09297 NADH pyrophosphatase zinc ribbon domain DJ46_1463 PF02767 DNA polymerase III beta subunit, central domain DJ46_1463 PF02768 DNA polymerase III beta subunit, C-terminal domain DJ46_1463 PF00712 DNA polymerase III beta subunit, N-terminal domain DJ46_1464 PF00293 NUDIX domain DJ46_1467 PF12706 Beta-lactamase superfamily domain DJ46_1471 PF09234 Domain of unknown function (DUF1963) DJ46_1477 PF01734 Patatin-like phospholipase DJ46_1478 PF08000 Bacterial PH domain DJ46_148 PF00269 Small, acid-soluble spore proteins, alpha/beta type DJ46_1480 PF12867 DinB superfamily DJ46_1484 PF02673 Bacitracin resistance protein BacA DJ46_1486 PF01541 GIY-YIG catalytic domain DJ46_149 PF01575 MaoC like domain DJ46_1494 PF01266 FAD dependent oxidoreductase DJ46_1499 PF13419 Haloacid dehalogenase-like hydrolase DJ46_1502 PF07859 alpha/beta hydrolase fold DJ46_1504 PF00282 Pyridoxal-dependent decarboxylase conserved domain DJ46_1505 PF00550 Phosphopantetheine attachment site DJ46_1505 PF00668 Condensation domain DJ46_1505 PF00501 AMP-binding enzyme DJ46_1505 PF13193 AMP-binding enzyme C-terminal domain DJ46_1507 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DJ46_1507 PF00128 Alpha amylase, catalytic domain DJ46_1507 PF03714 Bacterial pullanase-associated domain DJ46_1508 PF02868 Thermolysin metallopeptidase, alpha-helical domain DJ46_1508 PF01447 Thermolysin metallopeptidase, catalytic domain DJ46_1508 PF03413 Peptidase propeptide and YPEB domain DJ46_1508 PF07504 Fungalysin/Thermolysin Propeptide Motif DJ46_1512 PF00344 SecY translocase DJ46_1513 PF00308 Bacterial dnaA protein DJ46_1513 PF08299 Bacterial dnaA protein helix-turn-helix DJ46_1513 PF11638 DnaA N-terminal domain DJ46_1514 PF00892 EamA-like transporter family DJ46_1515 PF00392 Bacterial regulatory proteins, gntR family DJ46_1515 PF00155 Aminotransferase class I and II DJ46_1516 PF00561 alpha/beta hydrolase fold DJ46_1521 PF06081 Aromatic acid exporter family member 1 DJ46_1524 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) DJ46_1525 PF14620 YpeB sporulation DJ46_1525 PF03413 Peptidase propeptide and YPEB domain DJ46_1526 PF01471 Putative peptidoglycan binding domain DJ46_1526 PF07486 Cell Wall Hydrolase DJ46_1529 PF03301 Tryptophan 2,3-dioxygenase DJ46_1530 PF04199 Putative cyclase DJ46_1531 PF00266 Aminotransferase class-V DJ46_1532 PF08359 YsiA-like protein, C-terminal region DJ46_1532 PF00440 Bacterial regulatory proteins, tetR family DJ46_1533 PF00293 NUDIX domain DJ46_1533 PF13344 Haloacid dehalogenase-like hydrolase DJ46_1538 PF00158 Sigma-54 interaction domain DJ46_1538 PF02954 Bacterial regulatory protein, Fis family DJ46_1538 PF01590 GAF domain DJ46_154 PF00561 alpha/beta hydrolase fold DJ46_1541 PF13302 Acetyltransferase (GNAT) domain DJ46_1542 PF08220 DeoR-like helix-turn-helix domain DJ46_1542 PF00455 DeoR C terminal sensor domain DJ46_1545 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DJ46_1545 PF00403 Heavy-metal-associated domain DJ46_1545 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ46_1546 PF02082 Transcriptional regulator DJ46_1550 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ46_1550 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DJ46_1551 PF00364 Biotin-requiring enzyme DJ46_1551 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DJ46_1551 PF02817 e3 binding domain DJ46_1552 PF02780 Transketolase, C-terminal domain DJ46_1552 PF02779 Transketolase, pyrimidine binding domain DJ46_1553 PF00676 Dehydrogenase E1 component DJ46_1555 PF00106 short chain dehydrogenase DJ46_1556 PF04229 GrpB protein DJ46_1556 PF13673 Acetyltransferase (GNAT) domain DJ46_156 PF02386 Cation transport protein DJ46_1562 PF00528 Binding-protein-dependent transport system inner membrane component DJ46_1563 PF00005 ABC transporter DJ46_1563 PF00571 CBS domain DJ46_1564 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DJ46_1565 PF00574 Clp protease DJ46_1568 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DJ46_1569 PF13673 Acetyltransferase (GNAT) domain DJ46_1570 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading DJ46_1570 PF18416 N-acetylglucosamine binding protein domain 2 DJ46_1574 PF10990 Protein of unknown function (DUF2809) DJ46_1579 PF00753 Metallo-beta-lactamase superfamily DJ46_1579 PF03772 Competence protein DJ46_1579 PF13567 Domain of unknown function (DUF4131) DJ46_1589 PF13538 UvrD-like helicase C-terminal domain DJ46_1592 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like DJ46_1593 PF09382 RQC domain DJ46_1593 PF00270 DEAD/DEAH box helicase DJ46_1593 PF00271 Helicase conserved C-terminal domain DJ46_1593 PF00570 HRDC domain DJ46_1593 PF16124 RecQ zinc-binding DJ46_16 PF14168 YjzC-like protein DJ46_1601 PF01368 DHH family DJ46_1601 PF02833 DHHA2 domain DJ46_1602 PF18416 N-acetylglucosamine binding protein domain 2 DJ46_1602 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading DJ46_1604 PF02627 Carboxymuconolactone decarboxylase family DJ46_1605 PF01235 Sodium:alanine symporter family DJ46_1606 PF00171 Aldehyde dehydrogenase family DJ46_1607 PF00701 Dihydrodipicolinate synthetase family DJ46_1608 PF05544 Proline racemase DJ46_1609 PF05544 Proline racemase DJ46_161 PF00005 ABC transporter DJ46_161 PF08402 TOBE domain DJ46_1610 PF01266 FAD dependent oxidoreductase DJ46_1611 PF13188 PAS domain DJ46_1611 PF02954 Bacterial regulatory protein, Fis family DJ46_1611 PF00158 Sigma-54 interaction domain DJ46_1613 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ46_1613 PF04324 BFD-like [2Fe-2S] binding domain DJ46_1616 PF08876 Domain of unknown function (DUF1836) DJ46_1617 PF09335 SNARE associated Golgi protein DJ46_162 PF00005 ABC transporter DJ46_1620 PF04914 DltD protein DJ46_1621 PF13673 Acetyltransferase (GNAT) domain DJ46_1621 PF13302 Acetyltransferase (GNAT) domain DJ46_1621 PF03352 Methyladenine glycosylase DJ46_1621 PF00117 Glutamine amidotransferase class-I DJ46_1621 PF00958 GMP synthase C terminal domain DJ46_1622 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ46_1623 PF00877 NlpC/P60 family DJ46_1623 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain DJ46_1624 PF13378 Enolase C-terminal domain-like DJ46_1624 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DJ46_1627 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DJ46_1632 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DJ46_1632 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DJ46_1633 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_1633 PF00512 His Kinase A (phospho-acceptor) domain DJ46_1633 PF00989 PAS fold DJ46_1633 PF16736 Single Cache-like DJ46_1634 PF00486 Transcriptional regulatory protein, C terminal DJ46_1634 PF00072 Response regulator receiver domain DJ46_1638 PF01048 Phosphorylase superfamily DJ46_164 PF00528 Binding-protein-dependent transport system inner membrane component DJ46_1640 PF03808 Glycosyl transferase WecB/TagA/CpsF family DJ46_1641 PF01432 Peptidase family M3 DJ46_1641 PF08439 Oligopeptidase F DJ46_1644 PF02645 Uncharacterised protein, DegV family COG1307 DJ46_1648 PF07690 Major Facilitator Superfamily DJ46_165 PF13419 Haloacid dehalogenase-like hydrolase DJ46_1650 PF04519 Polymer-forming cytoskeletal DJ46_1651 PF13171 Protein of unknown function (DUF4004) DJ46_1652 PF12793 Sugar transport-related sRNA regulator N-term DJ46_1652 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ46_1653 PF07690 Major Facilitator Superfamily DJ46_1657 PF04226 Transglycosylase associated protein DJ46_1658 PF01156 Inosine-uridine preferring nucleoside hydrolase DJ46_166 PF00266 Aminotransferase class-V DJ46_1660 PF08241 Methyltransferase domain DJ46_1667 PF00155 Aminotransferase class I and II DJ46_1668 PF07977 FabA-like domain DJ46_1669 PF03630 Fumble DJ46_1673 PF00005 ABC transporter DJ46_168 PF00455 DeoR C terminal sensor domain DJ46_168 PF08220 DeoR-like helix-turn-helix domain DJ46_1682 PF01594 AI-2E family transporter DJ46_1684 PF00296 Luciferase-like monooxygenase DJ46_1685 PF00528 Binding-protein-dependent transport system inner membrane component DJ46_1686 PF09084 NMT1/THI5 like DJ46_1687 PF00005 ABC transporter DJ46_1695 PF02522 Aminoglycoside 3-N-acetyltransferase DJ46_17 PF02861 Clp amino terminal domain, pathogenicity island component DJ46_17 PF07724 AAA domain (Cdc48 subfamily) DJ46_17 PF00004 ATPase family associated with various cellular activities (AAA) DJ46_17 PF17871 AAA lid domain DJ46_17 PF10431 C-terminal, D2-small domain, of ClpB protein DJ46_1700 PF13536 Putative multidrug resistance efflux transporter DJ46_1701 PF12867 DinB superfamily DJ46_1705 PF08713 DNA alkylation repair enzyme DJ46_1707 PF01522 Polysaccharide deacetylase DJ46_1709 PF03741 Integral membrane protein TerC family DJ46_1710 PF00884 Sulfatase DJ46_1711 PF12848 ABC transporter DJ46_1711 PF00005 ABC transporter DJ46_1713 PF03176 MMPL family DJ46_1714 PF03176 MMPL family DJ46_1715 PF00440 Bacterial regulatory proteins, tetR family DJ46_1715 PF16295 Tetracyclin repressor-like, C-terminal domain DJ46_1717 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DJ46_1718 PF02153 Prephenate dehydrogenase DJ46_1718 PF01842 ACT domain DJ46_1719 PF00155 Aminotransferase class I and II DJ46_172 PF01520 N-acetylmuramoyl-L-alanine amidase DJ46_172 PF00395 S-layer homology domain DJ46_1720 PF01264 Chorismate synthase DJ46_1721 PF01817 Chorismate mutase type II DJ46_1721 PF00793 DAHP synthetase I family DJ46_1726 PF01636 Phosphotransferase enzyme family DJ46_1729 PF01476 LysM domain DJ46_1729 PF06725 3D domain DJ46_173 PF00596 Class II Aldolase and Adducin N-terminal domain DJ46_1731 PF04542 Sigma-70 region 2 DJ46_1731 PF08281 Sigma-70, region 4 DJ46_1736 PF06039 Malate:quinone oxidoreductase (Mqo) DJ46_1737 PF13407 Periplasmic binding protein domain DJ46_1738 PF02653 Branched-chain amino acid transport system / permease component DJ46_1739 PF02653 Branched-chain amino acid transport system / permease component DJ46_174 PF00596 Class II Aldolase and Adducin N-terminal domain DJ46_1740 PF00005 ABC transporter DJ46_1741 PF00325 Bacterial regulatory proteins, crp family DJ46_1741 PF04198 Putative sugar-binding domain DJ46_1742 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DJ46_1742 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DJ46_1743 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DJ46_1743 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DJ46_1745 PF01791 DeoC/LacD family aldolase DJ46_1749 PF03992 Antibiotic biosynthesis monooxygenase DJ46_1753 PF07662 Na+ dependent nucleoside transporter C-terminus DJ46_1753 PF01773 Na+ dependent nucleoside transporter N-terminus DJ46_1754 PF00171 Aldehyde dehydrogenase family DJ46_1755 PF00696 Amino acid kinase family DJ46_1755 PF01472 PUA domain DJ46_1756 PF03807 NADP oxidoreductase coenzyme F420-dependent DJ46_1756 PF14748 Pyrroline-5-carboxylate reductase dimerisation DJ46_1757 PF01546 Peptidase family M20/M25/M40 DJ46_1758 PF09339 IclR helix-turn-helix domain DJ46_1758 PF01614 Bacterial transcriptional regulator DJ46_1759 PF00324 Amino acid permease DJ46_176 PF04748 Divergent polysaccharide deacetylase DJ46_1760 PF01139 tRNA-splicing ligase RtcB DJ46_1761 PF00487 Fatty acid desaturase DJ46_1762 PF00245 Alkaline phosphatase DJ46_1763 PF11188 Protein of unknown function (DUF2975) DJ46_1764 PF13443 Cro/C1-type HTH DNA-binding domain DJ46_1767 PF10086 YhfC intramembrane metalloprotease DJ46_1769 PF04397 LytTr DNA-binding domain DJ46_1769 PF00072 Response regulator receiver domain DJ46_177 PF09388 Spo0E like sporulation regulatory protein DJ46_1771 PF13302 Acetyltransferase (GNAT) domain DJ46_1772 PF12681 Glyoxalase-like domain DJ46_1776 PF07726 ATPase family associated with various cellular activities (AAA) DJ46_1776 PF17863 AAA lid domain DJ46_1779 PF07690 Major Facilitator Superfamily DJ46_178 PF02743 Cache domain DJ46_178 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_178 PF00512 His Kinase A (phospho-acceptor) domain DJ46_1781 PF00535 Glycosyl transferase family 2 DJ46_1784 PF00535 Glycosyl transferase family 2 DJ46_1786 PF00535 Glycosyl transferase family 2 DJ46_1788 PF00202 Aminotransferase class-III DJ46_1789 PF06628 Catalase-related immune-responsive DJ46_1789 PF00199 Catalase DJ46_179 PF01047 MarR family DJ46_1791 PF01979 Amidohydrolase family DJ46_1791 PF13382 Adenine deaminase C-terminal domain DJ46_1792 PF00144 Beta-lactamase DJ46_1797 PF17863 AAA lid domain DJ46_1797 PF07726 ATPase family associated with various cellular activities (AAA) DJ46_1799 PF00881 Nitroreductase family DJ46_1800 PF01047 MarR family DJ46_1801 PF14492 Elongation Factor G, domain II DJ46_1801 PF03764 Elongation factor G, domain IV DJ46_1801 PF00009 Elongation factor Tu GTP binding domain DJ46_1801 PF00679 Elongation factor G C-terminus DJ46_1803 PF00293 NUDIX domain DJ46_1806 PF00005 ABC transporter DJ46_1807 PF00392 Bacterial regulatory proteins, gntR family DJ46_1809 PF02687 FtsX-like permease family DJ46_1809 PF00005 ABC transporter DJ46_1809 PF12704 MacB-like periplasmic core domain DJ46_181 PF12867 DinB superfamily DJ46_1814 PF12833 Helix-turn-helix domain DJ46_1815 PF00583 Acetyltransferase (GNAT) family DJ46_1818 PF00892 EamA-like transporter family DJ46_1819 PF00392 Bacterial regulatory proteins, gntR family DJ46_1819 PF00155 Aminotransferase class I and II DJ46_1820 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DJ46_1821 PF13031 Protein of unknown function (DUF3892) DJ46_1824 PF00672 HAMP domain DJ46_1824 PF00512 His Kinase A (phospho-acceptor) domain DJ46_1825 PF00072 Response regulator receiver domain DJ46_1825 PF00486 Transcriptional regulatory protein, C terminal DJ46_1826 PF00561 alpha/beta hydrolase fold DJ46_183 PF13426 PAS domain DJ46_183 PF13188 PAS domain DJ46_183 PF00989 PAS fold DJ46_183 PF00512 His Kinase A (phospho-acceptor) domain DJ46_183 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_1832 PF01925 Sulfite exporter TauE/SafE DJ46_1833 PF13302 Acetyltransferase (GNAT) domain DJ46_1834 PF00324 Amino acid permease DJ46_1836 PF08713 DNA alkylation repair enzyme DJ46_1837 PF10898 Protein of unknown function (DUF2716) DJ46_184 PF06508 Queuosine biosynthesis protein QueC DJ46_1841 PF00293 NUDIX domain DJ46_1843 PF10502 Signal peptidase, peptidase S26 DJ46_1846 PF02146 Sir2 family DJ46_1847 PF01470 Pyroglutamyl peptidase DJ46_185 PF01242 6-pyruvoyl tetrahydropterin synthase DJ46_1851 PF03746 LamB/YcsF family DJ46_1852 PF02626 Carboxyltransferase domain, subdomain A and B DJ46_1853 PF02682 Carboxyltransferase domain, subdomain C and D DJ46_1854 PF09339 IclR helix-turn-helix domain DJ46_1854 PF01614 Bacterial transcriptional regulator DJ46_1855 PF10502 Signal peptidase, peptidase S26 DJ46_1856 PF03932 CutC family DJ46_1857 PF07454 Stage II sporulation protein P (SpoIIP) DJ46_186 PF04055 Radical SAM superfamily DJ46_1860 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DJ46_1860 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DJ46_1860 PF02770 Acyl-CoA dehydrogenase, middle domain DJ46_1867 PF02915 Rubrerythrin DJ46_1869 PF00440 Bacterial regulatory proteins, tetR family DJ46_187 PF14489 QueF-like protein DJ46_1870 PF00391 PEP-utilising enzyme, mobile domain DJ46_1870 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DJ46_1871 PF00753 Metallo-beta-lactamase superfamily DJ46_1874 PF07875 Coat F domain DJ46_1876 PF08892 YqcI/YcgG family DJ46_1877 PF01810 LysE type translocator DJ46_1878 PF00324 Amino acid permease DJ46_1879 PF00324 Amino acid permease DJ46_188 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) DJ46_1881 PF00269 Small, acid-soluble spore proteins, alpha/beta type DJ46_1882 PF10710 Protein of unknown function (DUF2512) DJ46_1883 PF11553 Protein of unknown function (DUF3231) DJ46_1884 PF00269 Small, acid-soluble spore proteins, alpha/beta type DJ46_1885 PF08240 Alcohol dehydrogenase GroES-like domain DJ46_1885 PF00107 Zinc-binding dehydrogenase DJ46_1885 PF13823 Alcohol dehydrogenase GroES-associated DJ46_1888 PF10415 Fumarase C C-terminus DJ46_1888 PF00206 Lyase DJ46_1889 PF17763 Glutaminase/Asparaginase C-terminal domain DJ46_1889 PF00710 Asparaginase, N-terminal DJ46_1890 PF01381 Helix-turn-helix DJ46_1892 PF02151 UvrB/uvrC motif DJ46_1892 PF01541 GIY-YIG catalytic domain DJ46_1892 PF12826 Helix-hairpin-helix motif DJ46_1892 PF08459 UvrC Helix-hairpin-helix N-terminal DJ46_1893 PF13520 Amino acid permease DJ46_1894 PF05525 Branched-chain amino acid transport protein DJ46_1895 PF03807 NADP oxidoreductase coenzyme F420-dependent DJ46_1895 PF14748 Pyrroline-5-carboxylate reductase dimerisation DJ46_1896 PF13564 DoxX-like family DJ46_1897 PF00390 Malic enzyme, N-terminal domain DJ46_1897 PF03949 Malic enzyme, NAD binding domain DJ46_1899 PF05504 Spore germination B3/ GerAC like, C-terminal DJ46_1900 PF05504 Spore germination B3/ GerAC like, C-terminal DJ46_1901 PF03845 Spore germination protein DJ46_1902 PF03323 Bacillus/Clostridium GerA spore germination protein DJ46_1903 PF08664 YcbB domain DJ46_1903 PF00072 Response regulator receiver domain DJ46_1904 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_1905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_1906 PF04960 Glutaminase DJ46_1908 PF01235 Sodium:alanine symporter family DJ46_1914 PF02872 5'-nucleotidase, C-terminal domain DJ46_1914 PF17936 Bacterial Ig domain DJ46_1914 PF00149 Calcineurin-like phosphoesterase DJ46_1915 PF06628 Catalase-related immune-responsive DJ46_1915 PF00199 Catalase DJ46_1916 PF00561 alpha/beta hydrolase fold DJ46_1917 PF00857 Isochorismatase family DJ46_1922 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ46_1922 PF03466 LysR substrate binding domain DJ46_1923 PF01047 MarR family DJ46_1924 PF01544 CorA-like Mg2+ transporter protein DJ46_1925 PF01544 CorA-like Mg2+ transporter protein DJ46_1928 PF11181 Heat induced stress protein YflT DJ46_1931 PF03073 TspO/MBR family DJ46_1932 PF00875 DNA photolyase DJ46_1932 PF03441 FAD binding domain of DNA photolyase DJ46_1934 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) DJ46_1935 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DJ46_1935 PF00361 Proton-conducting membrane transporter DJ46_1936 PF10057 Uncharacterized conserved protein (DUF2294) DJ46_1938 PF01040 UbiA prenyltransferase family DJ46_1939 PF00561 alpha/beta hydrolase fold DJ46_1940 PF01297 Zinc-uptake complex component A periplasmic DJ46_1941 PF00950 ABC 3 transport family DJ46_1942 PF00005 ABC transporter DJ46_1947 PF01451 Low molecular weight phosphotyrosine protein phosphatase DJ46_1948 PF01758 Sodium Bile acid symporter family DJ46_1949 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ46_195 PF07972 NrdI Flavodoxin like DJ46_1950 PF01022 Bacterial regulatory protein, arsR family DJ46_1954 PF00012 Hsp70 protein DJ46_1957 PF01037 Lrp/AsnC ligand binding domain DJ46_196 PF08343 Ribonucleotide reductase N-terminal DJ46_196 PF02867 Ribonucleotide reductase, barrel domain DJ46_196 PF00317 Ribonucleotide reductase, all-alpha domain DJ46_1960 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ46_1962 PF01609 Transposase DDE domain DJ46_1967 PF00144 Beta-lactamase DJ46_1970 PF12802 MarR family DJ46_1971 PF00067 Cytochrome P450 DJ46_1971 PF00667 FAD binding domain DJ46_1971 PF00258 Flavodoxin DJ46_1971 PF00175 Oxidoreductase NAD-binding domain DJ46_1972 PF07690 Major Facilitator Superfamily DJ46_1977 PF00486 Transcriptional regulatory protein, C terminal DJ46_1977 PF00072 Response regulator receiver domain DJ46_1978 PF00672 HAMP domain DJ46_1978 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_1978 PF00512 His Kinase A (phospho-acceptor) domain DJ46_198 PF00317 Ribonucleotide reductase, all-alpha domain DJ46_198 PF08343 Ribonucleotide reductase N-terminal DJ46_198 PF02867 Ribonucleotide reductase, barrel domain DJ46_1983 PF00291 Pyridoxal-phosphate dependent enzyme DJ46_1987 PF00144 Beta-lactamase DJ46_1989 PF01381 Helix-turn-helix DJ46_199 PF00268 Ribonucleotide reductase, small chain DJ46_1992 PF00753 Metallo-beta-lactamase superfamily DJ46_1993 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family DJ46_1995 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DJ46_1995 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DJ46_1996 PF04072 Leucine carboxyl methyltransferase DJ46_1999 PF00005 ABC transporter DJ46_200 PF00392 Bacterial regulatory proteins, gntR family DJ46_2000 PF02687 FtsX-like permease family DJ46_2003 PF00672 HAMP domain DJ46_2003 PF00512 His Kinase A (phospho-acceptor) domain DJ46_2003 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_2004 PF00072 Response regulator receiver domain DJ46_2004 PF00486 Transcriptional regulatory protein, C terminal DJ46_2006 PF01047 MarR family DJ46_2007 PF00583 Acetyltransferase (GNAT) family DJ46_2008 PF04299 Putative FMN-binding domain DJ46_2009 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DJ46_2009 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DJ46_201 PF00005 ABC transporter DJ46_2010 PF07690 Major Facilitator Superfamily DJ46_2011 PF02589 LUD domain DJ46_2012 PF02589 LUD domain DJ46_2012 PF11870 Domain of unknown function (DUF3390) DJ46_2012 PF13183 4Fe-4S dicluster domain DJ46_2013 PF02754 Cysteine-rich domain DJ46_2014 PF03466 LysR substrate binding domain DJ46_2014 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ46_2016 PF17676 LD-carboxypeptidase C-terminal domain DJ46_2016 PF02016 LD-carboxypeptidase N-terminal domain DJ46_2020 PF07690 Major Facilitator Superfamily DJ46_2021 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DJ46_2021 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DJ46_2022 PF05116 Sucrose-6F-phosphate phosphohydrolase DJ46_2023 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DJ46_2024 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DJ46_2025 PF00356 Bacterial regulatory proteins, lacI family DJ46_2026 PF18801 response regulator aspartate phosphatase H, N terminal DJ46_203 PF00005 ABC transporter DJ46_2030 PF00817 impB/mucB/samB family DJ46_2030 PF11799 impB/mucB/samB family C-terminal domain DJ46_2030 PF11798 IMS family HHH motif DJ46_2033 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ46_2033 PF00672 HAMP domain DJ46_2033 PF02743 Cache domain DJ46_2034 PF00672 HAMP domain DJ46_2034 PF02743 Cache domain DJ46_2034 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ46_2038 PF01554 MatE DJ46_2039 PF18496 Collagenase G catalytic helper subdomain DJ46_2039 PF08453 Peptidase family M9 N-terminal DJ46_2039 PF01752 Collagenase DJ46_2040 PF01609 Transposase DDE domain DJ46_2041 PF02661 Fic/DOC family DJ46_2042 PF07690 Major Facilitator Superfamily DJ46_2043 PF00440 Bacterial regulatory proteins, tetR family DJ46_2043 PF16859 Tetracyclin repressor-like, C-terminal domain DJ46_2045 PF01022 Bacterial regulatory protein, arsR family DJ46_2047 PF03313 Serine dehydratase alpha chain DJ46_2048 PF01842 ACT domain DJ46_2048 PF03315 Serine dehydratase beta chain DJ46_2049 PF00202 Aminotransferase class-III DJ46_2050 PF01300 Telomere recombination DJ46_2050 PF17788 HypF Kae1-like domain DJ46_2050 PF00708 Acylphosphatase DJ46_2050 PF07503 HypF finger DJ46_2051 PF00586 AIR synthase related protein, N-terminal domain DJ46_2051 PF02769 AIR synthase related protein, C-terminal domain DJ46_2052 PF00857 Isochorismatase family DJ46_2053 PF01037 Lrp/AsnC ligand binding domain DJ46_2054 PF13520 Amino acid permease DJ46_2057 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DJ46_2057 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DJ46_2057 PF01842 ACT domain DJ46_2058 PF00266 Aminotransferase class-V DJ46_2061 PF08281 Sigma-70, region 4 DJ46_2061 PF04542 Sigma-70 region 2 DJ46_2064 PF07883 Cupin domain DJ46_2065 PF01497 Periplasmic binding protein DJ46_2065 PF12833 Helix-turn-helix domain DJ46_2066 PF01804 Penicillin amidase DJ46_2068 PF00395 S-layer homology domain DJ46_207 PF01037 Lrp/AsnC ligand binding domain DJ46_2075 PF14044 NETI protein DJ46_2076 PF07690 Major Facilitator Superfamily DJ46_2077 PF12697 Alpha/beta hydrolase family DJ46_2078 PF01047 MarR family DJ46_2079 PF07690 Major Facilitator Superfamily DJ46_2082 PF12679 ABC-2 family transporter protein DJ46_2083 PF13732 Domain of unknown function (DUF4162) DJ46_2083 PF00005 ABC transporter DJ46_2084 PF13396 Phospholipase_D-nuclease N-terminal DJ46_2086 PF17314 Family of unknown function (DUF5360) DJ46_2087 PF00893 Small Multidrug Resistance protein DJ46_2088 PF00440 Bacterial regulatory proteins, tetR family DJ46_2089 PF01289 Thiol-activated cytolysin DJ46_2089 PF17440 Thiol-activated cytolysin beta sandwich domain DJ46_209 PF00857 Isochorismatase family DJ46_2090 PF02667 Short chain fatty acid transporter DJ46_2092 PF02525 Flavodoxin-like fold DJ46_2096 PF14256 YwiC-like protein DJ46_2098 PF00005 ABC transporter DJ46_2099 PF02361 Cobalt transport protein DJ46_21 PF10815 ComZ DJ46_2102 PF03737 Aldolase/RraA DJ46_2103 PF03606 C4-dicarboxylate anaerobic carrier DJ46_2104 PF04231 Endonuclease I DJ46_2107 PF01381 Helix-turn-helix DJ46_2108 PF02660 Glycerol-3-phosphate acyltransferase DJ46_2109 PF04073 Aminoacyl-tRNA editing domain DJ46_211 PF17676 LD-carboxypeptidase C-terminal domain DJ46_211 PF02016 LD-carboxypeptidase N-terminal domain DJ46_2110 PF13393 Histidyl-tRNA synthetase DJ46_2110 PF03129 Anticodon binding domain DJ46_2113 PF01638 HxlR-like helix-turn-helix DJ46_2114 PF00881 Nitroreductase family DJ46_2116 PF00391 PEP-utilising enzyme, mobile domain DJ46_2116 PF00224 Pyruvate kinase, barrel domain DJ46_2116 PF02887 Pyruvate kinase, alpha/beta domain DJ46_212 PF03060 Nitronate monooxygenase DJ46_2120 PF00005 ABC transporter DJ46_2125 PF13419 Haloacid dehalogenase-like hydrolase DJ46_213 PF04914 DltD protein DJ46_2130 PF13344 Haloacid dehalogenase-like hydrolase DJ46_2130 PF00293 NUDIX domain DJ46_2132 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ46_2133 PF00480 ROK family DJ46_2134 PF07690 Major Facilitator Superfamily DJ46_2135 PF14602 Hexapeptide repeat of succinyl-transferase DJ46_2135 PF12464 Maltose acetyltransferase DJ46_2137 PF00005 ABC transporter DJ46_2139 PF00579 tRNA synthetases class I (W and Y) DJ46_214 PF00550 Phosphopantetheine attachment site DJ46_2140 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DJ46_2140 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DJ46_2140 PF13288 DXP reductoisomerase C-terminal domain DJ46_2141 PF01594 AI-2E family transporter DJ46_2145 PF08241 Methyltransferase domain DJ46_2147 PF07690 Major Facilitator Superfamily DJ46_215 PF03062 MBOAT, membrane-bound O-acyltransferase family DJ46_2151 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DJ46_2153 PF01595 Cyclin M transmembrane N-terminal domain DJ46_2153 PF03471 Transporter associated domain DJ46_2153 PF00571 CBS domain DJ46_2154 PF13411 MerR HTH family regulatory protein DJ46_2155 PF00892 EamA-like transporter family DJ46_2156 PF00805 Pentapeptide repeats (8 copies) DJ46_2157 PF06906 Protein of unknown function (DUF1272) DJ46_2158 PF10282 Lactonase, 7-bladed beta-propeller DJ46_2159 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DJ46_2159 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DJ46_216 PF13193 AMP-binding enzyme C-terminal domain DJ46_216 PF00501 AMP-binding enzyme DJ46_2160 PF02447 GntP family permease DJ46_2161 PF00923 Transaldolase/Fructose-6-phosphate aldolase DJ46_2162 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DJ46_2162 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DJ46_2163 PF02779 Transketolase, pyrimidine binding domain DJ46_2163 PF02780 Transketolase, C-terminal domain DJ46_2163 PF00456 Transketolase, thiamine diphosphate binding domain DJ46_2164 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DJ46_2164 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DJ46_2165 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DJ46_2165 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DJ46_2166 PF08240 Alcohol dehydrogenase GroES-like domain DJ46_2166 PF00107 Zinc-binding dehydrogenase DJ46_2167 PF00296 Luciferase-like monooxygenase DJ46_2169 PF00550 Phosphopantetheine attachment site DJ46_2169 PF00698 Acyl transferase domain DJ46_2169 PF14765 Polyketide synthase dehydratase DJ46_2169 PF08659 KR domain DJ46_2169 PF16197 Ketoacyl-synthetase C-terminal extension DJ46_2169 PF02801 Beta-ketoacyl synthase, C-terminal domain DJ46_2169 PF00109 Beta-ketoacyl synthase, N-terminal domain DJ46_2169 PF08240 Alcohol dehydrogenase GroES-like domain DJ46_2169 PF00107 Zinc-binding dehydrogenase DJ46_2170 PF00106 short chain dehydrogenase DJ46_2171 PF01447 Thermolysin metallopeptidase, catalytic domain DJ46_2171 PF07504 Fungalysin/Thermolysin Propeptide Motif DJ46_2171 PF02868 Thermolysin metallopeptidase, alpha-helical domain DJ46_2171 PF03413 Peptidase propeptide and YPEB domain DJ46_2175 PF00248 Aldo/keto reductase family DJ46_2176 PF07690 Major Facilitator Superfamily DJ46_2178 PF03928 Haem-degrading DJ46_2179 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ46_218 PF07687 Peptidase dimerisation domain DJ46_218 PF01546 Peptidase family M20/M25/M40 DJ46_2185 PF03960 ArsC family DJ46_2186 PF01638 HxlR-like helix-turn-helix DJ46_2187 PF00392 Bacterial regulatory proteins, gntR family DJ46_2187 PF07702 UTRA domain DJ46_2188 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DJ46_2188 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DJ46_2191 PF01638 HxlR-like helix-turn-helix DJ46_2192 PF01638 HxlR-like helix-turn-helix DJ46_2193 PF00248 Aldo/keto reductase family DJ46_2199 PF02567 Phenazine biosynthesis-like protein DJ46_22 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DJ46_22 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DJ46_220 PF00258 Flavodoxin DJ46_2203 PF00501 AMP-binding enzyme DJ46_2203 PF13193 AMP-binding enzyme C-terminal domain DJ46_2205 PF02525 Flavodoxin-like fold DJ46_2206 PF01638 HxlR-like helix-turn-helix DJ46_2209 PF01022 Bacterial regulatory protein, arsR family DJ46_2210 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain DJ46_2210 PF01522 Polysaccharide deacetylase DJ46_2212 PF12791 Anti-sigma factor N-terminus DJ46_2213 PF04542 Sigma-70 region 2 DJ46_2214 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 DJ46_2214 PF00535 Glycosyl transferase family 2 DJ46_2216 PF00440 Bacterial regulatory proteins, tetR family DJ46_2220 PF05656 Protein of unknown function (DUF805) DJ46_2221 PF01061 ABC-2 type transporter DJ46_2222 PF13732 Domain of unknown function (DUF4162) DJ46_2222 PF00005 ABC transporter DJ46_2225 PF03063 Prismane/CO dehydrogenase family DJ46_2228 PF00753 Metallo-beta-lactamase superfamily DJ46_2229 PF01471 Putative peptidoglycan binding domain DJ46_2229 PF01183 Glycosyl hydrolases family 25 DJ46_223 PF01636 Phosphotransferase enzyme family DJ46_2234 PF00144 Beta-lactamase DJ46_2242 PF00753 Metallo-beta-lactamase superfamily DJ46_2243 PF08240 Alcohol dehydrogenase GroES-like domain DJ46_2243 PF00107 Zinc-binding dehydrogenase DJ46_2244 PF00324 Amino acid permease DJ46_2245 PF07690 Major Facilitator Superfamily DJ46_2250 PF02585 GlcNAc-PI de-N-acetylase DJ46_2251 PF08830 Protein of unknown function (DUF1806) DJ46_2252 PF03600 Citrate transporter DJ46_2256 PF01497 Periplasmic binding protein DJ46_2258 PF01032 FecCD transport family DJ46_2259 PF01032 FecCD transport family DJ46_2260 PF05675 Protein of unknown function (DUF817) DJ46_2261 PF02567 Phenazine biosynthesis-like protein DJ46_2262 PF13170 Protein of unknown function (DUF4003) DJ46_2265 PF10901 Protein of unknown function (DUF2690) DJ46_2267 PF03466 LysR substrate binding domain DJ46_2267 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ46_2268 PF00107 Zinc-binding dehydrogenase DJ46_2268 PF08240 Alcohol dehydrogenase GroES-like domain DJ46_227 PF01554 MatE DJ46_2271 PF00488 MutS domain V DJ46_2271 PF01713 Smr domain DJ46_2273 PF09154 Domain of unknown function (DUF1939) DJ46_2273 PF00128 Alpha amylase, catalytic domain DJ46_2274 PF00797 N-acetyltransferase DJ46_2275 PF08439 Oligopeptidase F DJ46_2275 PF01432 Peptidase family M3 DJ46_2276 PF00144 Beta-lactamase DJ46_2278 PF07690 Major Facilitator Superfamily DJ46_2279 PF03466 LysR substrate binding domain DJ46_2279 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ46_228 PF02673 Bacitracin resistance protein BacA DJ46_2282 PF03009 Glycerophosphoryl diester phosphodiesterase family DJ46_2285 PF01494 FAD binding domain DJ46_2286 PF01022 Bacterial regulatory protein, arsR family DJ46_2287 PF00107 Zinc-binding dehydrogenase DJ46_2287 PF08240 Alcohol dehydrogenase GroES-like domain DJ46_2288 PF02696 Uncharacterized ACR, YdiU/UPF0061 family DJ46_2289 PF18801 response regulator aspartate phosphatase H, N terminal DJ46_2292 PF04299 Putative FMN-binding domain DJ46_2293 PF04229 GrpB protein DJ46_2295 PF01758 Sodium Bile acid symporter family DJ46_2296 PF02913 FAD linked oxidases, C-terminal domain DJ46_2296 PF01565 FAD binding domain DJ46_23 PF00109 Beta-ketoacyl synthase, N-terminal domain DJ46_23 PF02801 Beta-ketoacyl synthase, C-terminal domain DJ46_2300 PF00132 Bacterial transferase hexapeptide (six repeats) DJ46_2301 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DJ46_2302 PF00535 Glycosyl transferase family 2 DJ46_2303 PF00378 Enoyl-CoA hydratase/isomerase DJ46_2304 PF08453 Peptidase family M9 N-terminal DJ46_2304 PF01752 Collagenase DJ46_2304 PF18496 Collagenase G catalytic helper subdomain DJ46_2305 PF02308 MgtC family DJ46_2307 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ46_2308 PF04294 VanW like protein DJ46_231 PF01047 MarR family DJ46_2310 PF13039 Protein of unknown function (DUF3900) DJ46_2310 PF13037 Domain of unknown function (DUF3898) DJ46_2314 PF00313 'Cold-shock' DNA-binding domain DJ46_2316 PF00258 Flavodoxin DJ46_2318 PF00293 NUDIX domain DJ46_2320 PF00132 Bacterial transferase hexapeptide (six repeats) DJ46_2322 PF00106 short chain dehydrogenase DJ46_2324 PF14698 Argininosuccinate lyase C-terminal DJ46_2324 PF00206 Lyase DJ46_2326 PF01156 Inosine-uridine preferring nucleoside hydrolase DJ46_2327 PF00474 Sodium:solute symporter family DJ46_2329 PF00171 Aldehyde dehydrogenase family DJ46_233 PF00375 Sodium:dicarboxylate symporter family DJ46_2331 PF14151 YfhD-like protein DJ46_2332 PF13249 Squalene-hopene cyclase N-terminal domain DJ46_2332 PF13243 Squalene-hopene cyclase C-terminal domain DJ46_2333 PF02681 Divergent PAP2 family DJ46_2334 PF00892 EamA-like transporter family DJ46_2335 PF06961 Protein of unknown function (DUF1294) DJ46_2338 PF10609 NUBPL iron-transfer P-loop NTPase DJ46_234 PF02386 Cation transport protein DJ46_2340 PF02391 MoaE protein DJ46_2341 PF03453 MoeA N-terminal region (domain I and II) DJ46_2341 PF03454 MoeA C-terminal region (domain IV) DJ46_2341 PF00994 Probable molybdopterin binding domain DJ46_2342 PF00899 ThiF family DJ46_2343 PF01226 Formate/nitrite transporter DJ46_2344 PF06463 Molybdenum Cofactor Synthesis C DJ46_2344 PF04055 Radical SAM superfamily DJ46_2345 PF02634 FdhD/NarQ family DJ46_2346 PF10057 Uncharacterized conserved protein (DUF2294) DJ46_2347 PF07849 Protein of unknown function (DUF1641) DJ46_2348 PF01568 Molydopterin dinucleotide binding domain DJ46_2348 PF00384 Molybdopterin oxidoreductase DJ46_2348 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DJ46_2348 PF00037 4Fe-4S binding domain DJ46_2348 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DJ46_2350 PF03323 Bacillus/Clostridium GerA spore germination protein DJ46_2358 PF08241 Methyltransferase domain DJ46_2359 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ46_236 PF09579 Sporulation protein YtfJ (Spore_YtfJ) DJ46_2360 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ46_2361 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ46_2362 PF00375 Sodium:dicarboxylate symporter family DJ46_2363 PF03816 Cell envelope-related transcriptional attenuator domain DJ46_2365 PF04542 Sigma-70 region 2 DJ46_2365 PF08281 Sigma-70, region 4 DJ46_2369 PF13732 Domain of unknown function (DUF4162) DJ46_2369 PF00005 ABC transporter DJ46_2371 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DJ46_2371 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DJ46_2372 PF03989 DNA gyrase C-terminal domain, beta-propeller DJ46_2372 PF00521 DNA gyrase/topoisomerase IV, subunit A DJ46_2373 PF00204 DNA gyrase B DJ46_2373 PF01751 Toprim domain DJ46_2373 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_2373 PF00986 DNA gyrase B subunit, carboxyl terminus DJ46_2374 PF13380 CoA binding domain DJ46_2375 PF13180 PDZ domain DJ46_2376 PF00486 Transcriptional regulatory protein, C terminal DJ46_2376 PF00072 Response regulator receiver domain DJ46_2377 PF04055 Radical SAM superfamily DJ46_2378 PF03477 ATP cone domain DJ46_2378 PF13597 Anaerobic ribonucleoside-triphosphate reductase DJ46_2379 PF02660 Glycerol-3-phosphate acyltransferase DJ46_238 PF03698 Uncharacterised protein family (UPF0180) DJ46_2380 PF01521 Iron-sulphur cluster biosynthesis DJ46_2381 PF03061 Thioesterase superfamily DJ46_2382 PF00704 Glycosyl hydrolases family 18 DJ46_2382 PF01476 LysM domain DJ46_2384 PF08177 Small acid-soluble spore protein N family DJ46_2385 PF13040 Fur-regulated basic protein B DJ46_2386 PF07733 Bacterial DNA polymerase III alpha NTPase domain DJ46_2386 PF11490 DNA polymerase III polC-type N-terminus II DJ46_2386 PF01336 OB-fold nucleic acid binding domain DJ46_2386 PF14579 Helix-hairpin-helix motif DJ46_2386 PF00929 Exonuclease DJ46_2386 PF02811 PHP domain DJ46_2386 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DJ46_2387 PF00578 AhpC/TSA family DJ46_2389 PF00664 ABC transporter transmembrane region DJ46_2389 PF00005 ABC transporter DJ46_2389 PF03412 Peptidase C39 family DJ46_2390 PF00330 Aconitase family (aconitate hydratase) DJ46_2390 PF00694 Aconitase C-terminal domain DJ46_2392 PF01522 Polysaccharide deacetylase DJ46_2394 PF08179 Small acid-soluble spore protein P family DJ46_2396 PF07690 Major Facilitator Superfamily DJ46_2398 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DJ46_2398 PF01411 tRNA synthetases class II (A) DJ46_2398 PF02272 DHHA1 domain DJ46_2399 PF00293 NUDIX domain DJ46_2399 PF13344 Haloacid dehalogenase-like hydrolase DJ46_24 PF10026 Predicted Zn-dependent protease (DUF2268) DJ46_2401 PF02803 Thiolase, C-terminal domain DJ46_2401 PF00108 Thiolase, N-terminal domain DJ46_2402 PF00501 AMP-binding enzyme DJ46_2402 PF13193 AMP-binding enzyme C-terminal domain DJ46_2403 PF02632 BioY family DJ46_2404 PF00501 AMP-binding enzyme DJ46_2404 PF13193 AMP-binding enzyme C-terminal domain DJ46_2407 PF05532 CsbD-like DJ46_241 PF01063 Amino-transferase class IV DJ46_2413 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DJ46_2413 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DJ46_2415 PF13188 PAS domain DJ46_2415 PF00512 His Kinase A (phospho-acceptor) domain DJ46_2415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_2415 PF00989 PAS fold DJ46_2415 PF13426 PAS domain DJ46_2416 PF01738 Dienelactone hydrolase family DJ46_2417 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ46_2418 PF00474 Sodium:solute symporter family DJ46_2419 PF01645 Conserved region in glutamate synthase DJ46_242 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DJ46_242 PF00205 Thiamine pyrophosphate enzyme, central domain DJ46_242 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DJ46_2420 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DJ46_2421 PF02559 CarD-like/TRCF domain DJ46_2422 PF00491 Arginase family DJ46_2423 PF01979 Amidohydrolase family DJ46_2424 PF17391 Urocanase N-terminal domain DJ46_2424 PF01175 Urocanase Rossmann-like domain DJ46_2424 PF17392 Urocanase C-terminal domain DJ46_2425 PF00221 Aromatic amino acid lyase DJ46_2426 PF09021 HutP DJ46_2427 PF01209 ubiE/COQ5 methyltransferase family DJ46_243 PF01842 ACT domain DJ46_243 PF10369 Small subunit of acetolactate synthase DJ46_2431 PF11084 Protein of unknown function (DUF2621) DJ46_2437 PF07301 Protein of unknown function (DUF1453) DJ46_2438 PF02683 Cytochrome C biogenesis protein transmembrane region DJ46_244 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DJ46_244 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DJ46_2440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ46_2440 PF03466 LysR substrate binding domain DJ46_2441 PF03788 LrgA family DJ46_2442 PF04172 LrgB-like family DJ46_2443 PF00293 NUDIX domain DJ46_2443 PF13344 Haloacid dehalogenase-like hydrolase DJ46_2445 PF01925 Sulfite exporter TauE/SafE DJ46_2447 PF01471 Putative peptidoglycan binding domain DJ46_2447 PF01510 N-acetylmuramoyl-L-alanine amidase DJ46_245 PF08502 LeuA allosteric (dimerisation) domain DJ46_245 PF00682 HMGL-like DJ46_2450 PF00005 ABC transporter DJ46_2450 PF00664 ABC transporter transmembrane region DJ46_2451 PF00664 ABC transporter transmembrane region DJ46_2451 PF00005 ABC transporter DJ46_2452 PF03672 Uncharacterised protein family (UPF0154) DJ46_2453 PF10747 Sporulation inhibitor of replication protein SirA DJ46_2454 PF02780 Transketolase, C-terminal domain DJ46_2454 PF02779 Transketolase, pyrimidine binding domain DJ46_2454 PF00456 Transketolase, thiamine diphosphate binding domain DJ46_2455 PF12323 Helix-turn-helix domain DJ46_2455 PF07282 Putative transposase DNA-binding domain DJ46_2455 PF01385 Probable transposase DJ46_2456 PF00528 Binding-protein-dependent transport system inner membrane component DJ46_2457 PF00528 Binding-protein-dependent transport system inner membrane component DJ46_2458 PF00005 ABC transporter DJ46_246 PF00180 Isocitrate/isopropylmalate dehydrogenase DJ46_2461 PF00149 Calcineurin-like phosphoesterase DJ46_2461 PF02872 5'-nucleotidase, C-terminal domain DJ46_2462 PF05979 Bacterial protein of unknown function (DUF896) DJ46_2463 PF00239 Resolvase, N terminal domain DJ46_2464 PF00717 Peptidase S24-like DJ46_2464 PF01726 LexA DNA binding domain DJ46_2467 PF03551 Transcriptional regulator PadR-like family DJ46_247 PF00330 Aconitase family (aconitate hydratase) DJ46_2475 PF01471 Putative peptidoglycan binding domain DJ46_2475 PF01476 LysM domain DJ46_2475 PF01510 N-acetylmuramoyl-L-alanine amidase DJ46_2476 PF05105 Bacteriophage holin family DJ46_248 PF00694 Aconitase C-terminal domain DJ46_249 PF13393 Histidyl-tRNA synthetase DJ46_25 PF12227 Protein of unknown function (DUF3603) DJ46_250 PF01634 ATP phosphoribosyltransferase DJ46_2508 PF08281 Sigma-70, region 4 DJ46_251 PF00815 Histidinol dehydrogenase DJ46_2516 PF02511 Thymidylate synthase complementing protein DJ46_2517 PF00145 C-5 cytosine-specific DNA methylase DJ46_252 PF00475 Imidazoleglycerol-phosphate dehydratase DJ46_253 PF00117 Glutamine amidotransferase class-I DJ46_2532 PF01381 Helix-turn-helix DJ46_2536 PF02899 Phage integrase, N-terminal SAM-like domain DJ46_2536 PF00589 Phage integrase family DJ46_2537 PF03951 Glutamine synthetase, beta-Grasp domain DJ46_2537 PF00120 Glutamine synthetase, catalytic domain DJ46_2538 PF13411 MerR HTH family regulatory protein DJ46_2539 PF06838 Methionine gamma-lyase DJ46_254 PF00977 Histidine biosynthesis protein DJ46_2540 PF01926 50S ribosome-binding GTPase DJ46_2540 PF16360 GTP-binding GTPase Middle Region DJ46_2540 PF13167 GTP-binding GTPase N-terminal DJ46_2541 PF01926 50S ribosome-binding GTPase DJ46_2541 PF13167 GTP-binding GTPase N-terminal DJ46_2541 PF16360 GTP-binding GTPase Middle Region DJ46_2542 PF03458 UPF0126 domain DJ46_2543 PF00004 ATPase family associated with various cellular activities (AAA) DJ46_2543 PF17866 AAA lid domain DJ46_2547 PF17209 Hfq protein DJ46_255 PF00977 Histidine biosynthesis protein DJ46_2550 PF01476 LysM domain DJ46_2550 PF06725 3D domain DJ46_2551 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DJ46_2551 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DJ46_2552 PF00294 pfkB family carbohydrate kinase DJ46_2553 PF00455 DeoR C terminal sensor domain DJ46_2553 PF08220 DeoR-like helix-turn-helix domain DJ46_2554 PF00465 Iron-containing alcohol dehydrogenase DJ46_2555 PF00465 Iron-containing alcohol dehydrogenase DJ46_2556 PF04238 Protein of unknown function (DUF420) DJ46_2559 PF00324 Amino acid permease DJ46_256 PF01502 Phosphoribosyl-AMP cyclohydrolase DJ46_2560 PF00041 Fibronectin type III domain DJ46_2560 PF00704 Glycosyl hydrolases family 18 DJ46_2562 PF10518 TAT (twin-arginine translocation) pathway signal sequence DJ46_2562 PF00149 Calcineurin-like phosphoesterase DJ46_2563 PF01226 Formate/nitrite transporter DJ46_2564 PF00216 Bacterial DNA-binding protein DJ46_2565 PF00403 Heavy-metal-associated domain DJ46_2566 PF00403 Heavy-metal-associated domain DJ46_2567 PF02583 Metal-sensitive transcriptional repressor DJ46_2569 PF00756 Putative esterase DJ46_257 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DJ46_2570 PF00005 ABC transporter DJ46_2571 PF01032 FecCD transport family DJ46_2572 PF01032 FecCD transport family DJ46_2573 PF01497 Periplasmic binding protein DJ46_2575 PF03372 Endonuclease/Exonuclease/phosphatase family DJ46_2576 PF12833 Helix-turn-helix domain DJ46_2576 PF02805 Metal binding domain of Ada DJ46_2577 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DJ46_2577 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DJ46_2578 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain DJ46_2578 PF00730 HhH-GPD superfamily base excision DNA repair protein DJ46_2579 PF01546 Peptidase family M20/M25/M40 DJ46_2579 PF07687 Peptidase dimerisation domain DJ46_258 PF02811 PHP domain DJ46_2583 PF00561 alpha/beta hydrolase fold DJ46_2584 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ46_2585 PF00563 EAL domain DJ46_2585 PF00990 Diguanylate cyclase, GGDEF domain DJ46_2585 PF03707 Bacterial signalling protein N terminal repeat DJ46_2587 PF10787 Uncharacterised protein from bacillus cereus group DJ46_2588 PF04172 LrgB-like family DJ46_2589 PF03788 LrgA family DJ46_2590 PF00392 Bacterial regulatory proteins, gntR family DJ46_2590 PF00155 Aminotransferase class I and II DJ46_2591 PF00364 Biotin-requiring enzyme DJ46_2591 PF00561 alpha/beta hydrolase fold DJ46_2592 PF02585 GlcNAc-PI de-N-acetylase DJ46_2594 PF00388 Phosphatidylinositol-specific phospholipase C, X domain DJ46_2595 PF00082 Subtilase family DJ46_2596 PF07486 Cell Wall Hydrolase DJ46_2597 PF03275 UDP-galactopyranose mutase DJ46_2598 PF00884 Sulfatase DJ46_2599 PF00350 Dynamin family DJ46_26 PF00579 tRNA synthetases class I (W and Y) DJ46_260 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DJ46_260 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DJ46_2601 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family DJ46_2602 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_2602 PF00512 His Kinase A (phospho-acceptor) domain DJ46_2603 PF00486 Transcriptional regulatory protein, C terminal DJ46_2603 PF00072 Response regulator receiver domain DJ46_2606 PF00005 ABC transporter DJ46_2607 PF01119 DNA mismatch repair protein, C-terminal domain DJ46_2607 PF08676 MutL C terminal dimerisation domain DJ46_2608 PF05192 MutS domain III DJ46_2608 PF01624 MutS domain I DJ46_2608 PF05190 MutS family domain IV DJ46_2608 PF00488 MutS domain V DJ46_2608 PF05188 MutS domain II DJ46_2609 PF10628 Outer spore coat protein E (CotE) DJ46_261 PF01066 CDP-alcohol phosphatidyltransferase DJ46_2610 PF06133 Control of competence regulator ComK, YlbF/YmcA DJ46_2611 PF04055 Radical SAM superfamily DJ46_2611 PF01938 TRAM domain DJ46_2611 PF00919 Uncharacterized protein family UPF0004 DJ46_2612 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DJ46_2613 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DJ46_2613 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DJ46_2613 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DJ46_2614 PF01244 Membrane dipeptidase (Peptidase family M19) DJ46_2615 PF04232 Stage V sporulation protein S (SpoVS) DJ46_2616 PF13277 YmdB-like protein DJ46_2617 PF12072 Domain of unknown function (DUF3552) DJ46_2617 PF01966 HD domain DJ46_2617 PF00013 KH domain DJ46_2618 PF00154 recA bacterial DNA recombination protein DJ46_2619 PF00154 recA bacterial DNA recombination protein DJ46_262 PF00884 Sulfatase DJ46_2620 PF00994 Probable molybdopterin binding domain DJ46_2620 PF18146 Damage-inducible protein CinA KH domain DJ46_2620 PF02464 Competence-damaged protein DJ46_2621 PF01066 CDP-alcohol phosphatidyltransferase DJ46_2622 PF13464 Domain of unknown function (DUF4115) DJ46_2623 PF11868 Protein of unknown function (DUF3388) DJ46_2624 PF11588 Protein of unknown function (DUF3243) DJ46_2626 PF05193 Peptidase M16 inactive domain DJ46_2626 PF00675 Insulinase (Peptidase family M16) DJ46_2627 PF05193 Peptidase M16 inactive domain DJ46_2633 PF00392 Bacterial regulatory proteins, gntR family DJ46_2633 PF07702 UTRA domain DJ46_2634 PF09397 Ftsk gamma domain DJ46_2634 PF01580 FtsK/SpoIIIE family DJ46_2634 PF17854 FtsK alpha domain DJ46_2635 PF14035 YlzJ-like protein DJ46_2636 PF00574 Clp protease DJ46_2637 PF17770 Ribonuclease J C-terminal domain DJ46_2637 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DJ46_2637 PF00753 Metallo-beta-lactamase superfamily DJ46_2638 PF00701 Dihydrodipicolinate synthetase family DJ46_2639 PF00696 Amino acid kinase family DJ46_2639 PF13840 ACT domain DJ46_264 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DJ46_264 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DJ46_2640 PF01118 Semialdehyde dehydrogenase, NAD binding domain DJ46_2640 PF02774 Semialdehyde dehydrogenase, dimerisation domain DJ46_2641 PF02441 Flavoprotein DJ46_2642 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DJ46_2642 PF16924 Dipicolinate synthase subunit A N-terminal domain DJ46_2643 PF05239 PRC-barrel domain DJ46_2644 PF05193 Peptidase M16 inactive domain DJ46_2644 PF00675 Insulinase (Peptidase family M16) DJ46_2645 PF01522 Polysaccharide deacetylase DJ46_2646 PF01138 3' exoribonuclease family, domain 1 DJ46_2646 PF00575 S1 RNA binding domain DJ46_2646 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DJ46_2646 PF00013 KH domain DJ46_2646 PF03725 3' exoribonuclease family, domain 2 DJ46_2647 PF00312 Ribosomal protein S15 DJ46_2648 PF01687 Riboflavin kinase DJ46_2648 PF06574 FAD synthetase DJ46_2649 PF16198 tRNA pseudouridylate synthase B C-terminal domain DJ46_2649 PF01509 TruB family pseudouridylate synthase (N terminal domain) DJ46_2650 PF02033 Ribosome-binding factor A DJ46_2651 PF04456 Protein of unknown function (DUF503) DJ46_2652 PF04760 Translation initiation factor IF-2, N-terminal region DJ46_2652 PF00009 Elongation factor Tu GTP binding domain DJ46_2652 PF11987 Translation-initiation factor 2 DJ46_2653 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family DJ46_2654 PF04296 Protein of unknown function (DUF448) DJ46_2655 PF13184 NusA-like KH domain DJ46_2655 PF00575 S1 RNA binding domain DJ46_2655 PF08529 NusA N-terminal domain DJ46_2656 PF17384 RimP C-terminal SH3 domain DJ46_2656 PF02576 RimP N-terminal domain DJ46_2657 PF14480 DNA polymerase III polC-type N-terminus I DJ46_2657 PF07733 Bacterial DNA polymerase III alpha NTPase domain DJ46_2657 PF11490 DNA polymerase III polC-type N-terminus II DJ46_2657 PF14579 Helix-hairpin-helix motif DJ46_2657 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DJ46_2657 PF02811 PHP domain DJ46_2657 PF00929 Exonuclease DJ46_2658 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DJ46_2658 PF03129 Anticodon binding domain DJ46_2658 PF04073 Aminoacyl-tRNA editing domain DJ46_2659 PF17820 PDZ domain DJ46_2659 PF02163 Peptidase family M50 DJ46_266 PF01507 Phosphoadenosine phosphosulfate reductase family DJ46_2660 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DJ46_2660 PF13288 DXP reductoisomerase C-terminal domain DJ46_2660 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DJ46_2662 PF01255 Putative undecaprenyl diphosphate synthase DJ46_2663 PF01765 Ribosome recycling factor DJ46_2664 PF00696 Amino acid kinase family DJ46_2665 PF00889 Elongation factor TS DJ46_2666 PF00318 Ribosomal protein S2 DJ46_2667 PF06018 CodY GAF-like domain DJ46_2667 PF08222 CodY helix-turn-helix domain DJ46_2668 PF10431 C-terminal, D2-small domain, of ClpB protein DJ46_2668 PF07724 AAA domain (Cdc48 subfamily) DJ46_2668 PF00004 ATPase family associated with various cellular activities (AAA) DJ46_2669 PF00227 Proteasome subunit DJ46_267 PF14306 PUA-like domain DJ46_267 PF01747 ATP-sulfurylase DJ46_2670 PF02899 Phage integrase, N-terminal SAM-like domain DJ46_2670 PF00589 Phage integrase family DJ46_2671 PF01134 Glucose inhibited division protein A DJ46_2672 PF01751 Toprim domain DJ46_2672 PF01396 Topoisomerase DNA binding C4 zinc finger DJ46_2672 PF01131 DNA topoisomerase DJ46_2674 PF00549 CoA-ligase DJ46_2674 PF02629 CoA binding domain DJ46_2675 PF08442 ATP-grasp domain DJ46_2675 PF00549 CoA-ligase DJ46_2676 PF01351 Ribonuclease HII DJ46_2677 PF01926 50S ribosome-binding GTPase DJ46_2678 PF10502 Signal peptidase, peptidase S26 DJ46_2679 PF01245 Ribosomal protein L19 DJ46_2680 PF01746 tRNA (Guanine-1)-methyltransferase DJ46_2681 PF05239 PRC-barrel domain DJ46_2681 PF01782 RimM N-terminal domain DJ46_2683 PF00886 Ribosomal protein S16 DJ46_2684 PF02881 SRP54-type protein, helical bundle domain DJ46_2684 PF02978 Signal peptide binding domain DJ46_2684 PF00448 SRP54-type protein, GTPase domain DJ46_2685 PF04297 Putative helix-turn-helix protein, YlxM / p13 like DJ46_2686 PF02881 SRP54-type protein, helical bundle domain DJ46_2686 PF00448 SRP54-type protein, GTPase domain DJ46_2687 PF06470 SMC proteins Flexible Hinge Domain DJ46_2687 PF02463 RecF/RecN/SMC N terminal domain DJ46_2688 PF14622 Ribonuclease-III-like DJ46_2688 PF00035 Double-stranded RNA binding motif DJ46_2689 PF00550 Phosphopantetheine attachment site DJ46_269 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DJ46_269 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DJ46_2691 PF00698 Acyl transferase domain DJ46_2692 PF02504 Fatty acid synthesis protein DJ46_2693 PF03061 Thioesterase superfamily DJ46_2694 PF00270 DEAD/DEAH box helicase DJ46_2694 PF00271 Helicase conserved C-terminal domain DJ46_2694 PF17191 RecG wedge domain DJ46_2695 PF02734 DAK2 domain DJ46_2695 PF13684 Dihydroxyacetone kinase family DJ46_2696 PF03780 Asp23 family, cell envelope-related function DJ46_2697 PF00830 Ribosomal L28 family DJ46_2698 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain DJ46_2698 PF04263 Thiamin pyrophosphokinase, catalytic domain DJ46_2699 PF00834 Ribulose-phosphate 3 epimerase family DJ46_2700 PF16745 RsgA N-terminal domain DJ46_2700 PF03193 RsgA GTPase DJ46_2701 PF00069 Protein kinase domain DJ46_2701 PF03793 PASTA domain DJ46_2703 PF04055 Radical SAM superfamily DJ46_2704 PF01029 NusB family DJ46_2704 PF01189 16S rRNA methyltransferase RsmB/F DJ46_2705 PF02911 Formyl transferase, C-terminal domain DJ46_2705 PF00551 Formyl transferase DJ46_2706 PF01327 Polypeptide deformylase DJ46_2707 PF18074 Primosomal protein N C-terminal domain DJ46_2707 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DJ46_2707 PF17764 3′ DNA-binding domain (3′BD) DJ46_2707 PF00271 Helicase conserved C-terminal domain DJ46_2707 PF04851 Type III restriction enzyme, res subunit DJ46_2708 PF04127 DNA / pantothenate metabolism flavoprotein DJ46_2708 PF02441 Flavoprotein DJ46_2709 PF01192 RNA polymerase Rpb6 DJ46_271 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DJ46_2710 PF00625 Guanylate kinase DJ46_2711 PF04025 Domain of unknown function (DUF370) DJ46_2712 PF08340 Domain of unknown function (DUF1732) DJ46_2712 PF03755 YicC-like family, N-terminal region DJ46_2713 PF00690 Cation transporter/ATPase, N-terminus DJ46_2713 PF00689 Cation transporting ATPase, C-terminus DJ46_2715 PF00557 Metallopeptidase family M24 DJ46_2715 PF01321 Creatinase/Prolidase N-terminal domain DJ46_272 PF01903 CbiX DJ46_2721 PF00156 Phosphoribosyl transferase domain DJ46_2722 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DJ46_2723 PF01180 Dihydroorotate dehydrogenase DJ46_2724 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B DJ46_2724 PF00175 Oxidoreductase NAD-binding domain DJ46_2725 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DJ46_2725 PF02142 MGS-like domain DJ46_2725 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DJ46_2726 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DJ46_2726 PF00117 Glutamine amidotransferase class-I DJ46_2727 PF01979 Amidohydrolase family DJ46_2728 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DJ46_2728 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DJ46_2729 PF00860 Permease family DJ46_2730 PF00156 Phosphoribosyl transferase domain DJ46_2731 PF00849 RNA pseudouridylate synthase DJ46_2731 PF01479 S4 domain DJ46_2732 PF01252 Signal peptidase (SPase) II DJ46_2734 PF08264 Anticodon-binding domain of tRNA DJ46_2734 PF06827 Zinc finger found in FPG and IleRS DJ46_2734 PF00133 tRNA synthetases class I (I, L, M and V) DJ46_2735 PF05103 DivIVA protein DJ46_2736 PF17774 Putative RNA-binding domain in YlmH DJ46_2736 PF01479 S4 domain DJ46_2737 PF02325 YGGT family DJ46_2738 PF04472 Cell division protein SepF DJ46_2739 PF01168 Alanine racemase, N-terminal domain DJ46_274 PF00209 Sodium:neurotransmitter symporter family DJ46_2741 PF05239 PRC-barrel domain DJ46_2742 PF04545 Sigma-70, region 4 DJ46_2742 PF04539 Sigma-70 region 3 DJ46_2742 PF04542 Sigma-70 region 2 DJ46_2743 PF04545 Sigma-70, region 4 DJ46_2743 PF04542 Sigma-70 region 2 DJ46_2744 PF03419 Sporulation factor SpoIIGA DJ46_2745 PF12327 FtsZ family, C-terminal domain DJ46_2745 PF00091 Tubulin/FtsZ family, GTPase domain DJ46_2746 PF02491 SHS2 domain inserted in FTSA DJ46_2747 PF08478 POTRA domain, FtsQ-type DJ46_2747 PF03799 Cell division protein FtsQ DJ46_2748 PF01565 FAD binding domain DJ46_2748 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DJ46_2749 PF03033 Glycosyltransferase family 28 N-terminal domain DJ46_2749 PF04101 Glycosyltransferase family 28 C-terminal domain DJ46_2750 PF01098 Cell cycle protein DJ46_2751 PF08245 Mur ligase middle domain DJ46_2751 PF02875 Mur ligase family, glutamate ligase domain DJ46_2752 PF00953 Glycosyl transferase family 4 DJ46_2752 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DJ46_2753 PF08245 Mur ligase middle domain DJ46_2753 PF02875 Mur ligase family, glutamate ligase domain DJ46_2753 PF01225 Mur ligase family, catalytic domain DJ46_2754 PF00905 Penicillin binding protein transpeptidase domain DJ46_2754 PF03717 Penicillin-binding Protein dimerisation domain DJ46_2754 PF03793 PASTA domain DJ46_2756 PF04977 Septum formation initiator DJ46_2757 PF01795 MraW methylase family DJ46_2758 PF10079 Bacillithiol biosynthesis BshC DJ46_2759 PF08546 Ketopantoate reductase PanE/ApbA C terminal DJ46_2759 PF02558 Ketopantoate reductase PanE/ApbA DJ46_276 PF00375 Sodium:dicarboxylate symporter family DJ46_2760 PF00583 Acetyltransferase (GNAT) family DJ46_2762 PF01783 Ribosomal L32p protein family DJ46_2763 PF02620 Large ribosomal RNA subunit accumulation protein YceD DJ46_2772 PF12123 N-acetylmuramoyl-l-alanine amidase DJ46_2772 PF01510 N-acetylmuramoyl-L-alanine amidase DJ46_2773 PF05105 Bacteriophage holin family DJ46_278 PF03553 Na+/H+ antiporter family DJ46_2790 PF00574 Clp protease DJ46_2792 PF03354 Phage Terminase DJ46_2796 PF10137 Predicted nucleotide-binding protein containing TIR-like domain DJ46_2797 PF00589 Phage integrase family DJ46_28 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ46_2807 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ46_281 PF09922 Cell wall-active antibiotics response 4TMS YvqF DJ46_2812 PF04539 Sigma-70 region 3 DJ46_2812 PF04545 Sigma-70, region 4 DJ46_2812 PF04542 Sigma-70 region 2 DJ46_2817 PF01695 IstB-like ATP binding protein DJ46_2817 PF07319 Primosomal protein DnaI N-terminus DJ46_282 PF00672 HAMP domain DJ46_282 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_282 PF07730 Histidine kinase DJ46_2823 PF01381 Helix-turn-helix DJ46_2827 PF01381 Helix-turn-helix DJ46_283 PF00072 Response regulator receiver domain DJ46_283 PF00196 Bacterial regulatory proteins, luxR family DJ46_2831 PF00589 Phage integrase family DJ46_2831 PF14659 Phage integrase, N-terminal SAM-like domain DJ46_2832 PF05636 HIGH Nucleotidyl Transferase DJ46_2833 PF13180 PDZ domain DJ46_2833 PF05362 Lon protease (S16) C-terminal proteolytic domain DJ46_2834 PF01734 Patatin-like phospholipase DJ46_2835 PF01467 Cytidylyltransferase-like DJ46_2836 PF07670 Nucleoside recognition DJ46_2840 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) DJ46_2841 PF06133 Control of competence regulator ComK, YlbF/YmcA DJ46_2842 PF00300 Histidine phosphatase superfamily (branch 1) DJ46_2843 PF14003 YlbE-like protein DJ46_2844 PF14071 Putative coat protein DJ46_2845 PF00188 Cysteine-rich secretory protein family DJ46_2845 PF14504 CAP-associated N-terminal DJ46_2846 PF08868 YugN-like family DJ46_2847 PF00795 Carbon-nitrogen hydrolase DJ46_2848 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) DJ46_2849 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DJ46_285 PF05525 Branched-chain amino acid transport protein DJ46_2850 PF00510 Cytochrome c oxidase subunit III DJ46_2851 PF00115 Cytochrome C and Quinol oxidase polypeptide I DJ46_2852 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DJ46_2852 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DJ46_2852 PF00034 Cytochrome c DJ46_2853 PF01040 UbiA prenyltransferase family DJ46_2854 PF02628 Cytochrome oxidase assembly protein DJ46_2855 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DJ46_2855 PF00682 HMGL-like DJ46_2855 PF02436 Conserved carboxylase domain DJ46_2855 PF00364 Biotin-requiring enzyme DJ46_2855 PF00289 Biotin carboxylase, N-terminal domain DJ46_2855 PF02785 Biotin carboxylase C-terminal domain DJ46_2856 PF01098 Cell cycle protein DJ46_2857 PF07408 Protein of unknown function (DUF1507) DJ46_2859 PF02562 PhoH-like protein DJ46_2859 PF13638 PIN domain DJ46_2861 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) DJ46_2863 PF14036 YlaH-like protein DJ46_2866 PF00459 Inositol monophosphatase family DJ46_2868 PF06335 Protein of unknown function (DUF1054) DJ46_2869 PF05256 Uncharacterised protein family (UPF0223) DJ46_287 PF08241 Methyltransferase domain DJ46_2870 PF01276 Orn/Lys/Arg decarboxylase, major domain DJ46_2870 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DJ46_2878 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DJ46_2878 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ46_2879 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DJ46_2879 PF02817 e3 binding domain DJ46_2879 PF00364 Biotin-requiring enzyme DJ46_2880 PF02780 Transketolase, C-terminal domain DJ46_2880 PF02779 Transketolase, pyrimidine binding domain DJ46_2881 PF00676 Dehydrogenase E1 component DJ46_2883 PF01327 Polypeptide deformylase DJ46_2886 PF00753 Metallo-beta-lactamase superfamily DJ46_2886 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DJ46_2886 PF17770 Ribonuclease J C-terminal domain DJ46_2887 PF02080 TrkA-C domain DJ46_2887 PF02254 TrkA-N domain DJ46_2889 PF01546 Peptidase family M20/M25/M40 DJ46_2889 PF07687 Peptidase dimerisation domain DJ46_2890 PF14602 Hexapeptide repeat of succinyl-transferase DJ46_2890 PF00132 Bacterial transferase hexapeptide (six repeats) DJ46_2890 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal DJ46_2891 PF03466 LysR substrate binding domain DJ46_2891 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ46_2894 PF04308 Ribonuclease H-like DJ46_2896 PF08796 Protein of unknown function (DUF1797) DJ46_2899 PF10388 EAL-domain associated signalling protein domain DJ46_2899 PF00563 EAL domain DJ46_29 PF00528 Binding-protein-dependent transport system inner membrane component DJ46_2901 PF00149 Calcineurin-like phosphoesterase DJ46_2901 PF10518 TAT (twin-arginine translocation) pathway signal sequence DJ46_2903 PF02503 Polyphosphate kinase middle domain DJ46_2903 PF17941 Polyphosphate kinase C-terminal domain 1 DJ46_2903 PF13089 Polyphosphate kinase N-terminal domain DJ46_2903 PF13090 Polyphosphate kinase C-terminal domain 2 DJ46_2904 PF02541 Ppx/GppA phosphatase family DJ46_2905 PF14177 YkyB-like protein DJ46_2910 PF07690 Major Facilitator Superfamily DJ46_2912 PF08267 Cobalamin-independent synthase, N-terminal domain DJ46_2912 PF01717 Cobalamin-independent synthase, Catalytic domain DJ46_2916 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_2916 PF00512 His Kinase A (phospho-acceptor) domain DJ46_2918 PF00155 Aminotransferase class I and II DJ46_2919 PF00356 Bacterial regulatory proteins, lacI family DJ46_2919 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DJ46_292 PF00175 Oxidoreductase NAD-binding domain DJ46_292 PF00042 Globin DJ46_292 PF00970 Oxidoreductase FAD-binding domain DJ46_2920 PF00528 Binding-protein-dependent transport system inner membrane component DJ46_2921 PF00528 Binding-protein-dependent transport system inner membrane component DJ46_2922 PF13416 Bacterial extracellular solute-binding protein DJ46_2923 PF02903 Alpha amylase, N-terminal ig-like domain DJ46_2923 PF00128 Alpha amylase, catalytic domain DJ46_2923 PF16657 Maltogenic Amylase, C-terminal domain DJ46_2924 PF16657 Maltogenic Amylase, C-terminal domain DJ46_2924 PF00128 Alpha amylase, catalytic domain DJ46_2925 PF00005 ABC transporter DJ46_2925 PF03459 TOBE domain DJ46_2925 PF17912 MalK OB fold domain DJ46_2933 PF00108 Thiolase, N-terminal domain DJ46_2933 PF02803 Thiolase, C-terminal domain DJ46_2934 PF00293 NUDIX domain DJ46_2940 PF03551 Transcriptional regulator PadR-like family DJ46_2944 PF01636 Phosphotransferase enzyme family DJ46_2945 PF00795 Carbon-nitrogen hydrolase DJ46_2946 PF00155 Aminotransferase class I and II DJ46_2947 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain DJ46_2947 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain DJ46_2949 PF00596 Class II Aldolase and Adducin N-terminal domain DJ46_295 PF01925 Sulfite exporter TauE/SafE DJ46_2950 PF03079 ARD/ARD' family DJ46_2953 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DJ46_2953 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DJ46_2954 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DJ46_2954 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DJ46_2955 PF00990 Diguanylate cyclase, GGDEF domain DJ46_2956 PF00881 Nitroreductase family DJ46_2959 PF00391 PEP-utilising enzyme, mobile domain DJ46_2959 PF05524 PEP-utilising enzyme, N-terminal DJ46_2959 PF02896 PEP-utilising enzyme, TIM barrel domain DJ46_296 PF01384 Phosphate transporter family DJ46_2960 PF00381 PTS HPr component phosphorylation site DJ46_2961 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DJ46_2961 PF02378 Phosphotransferase system, EIIC DJ46_2961 PF00367 phosphotransferase system, EIIB DJ46_2962 PF00874 PRD domain DJ46_2962 PF03123 CAT RNA binding domain DJ46_2965 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DJ46_2966 PF01979 Amidohydrolase family DJ46_2968 PF04079 Segregation and condensation complex subunit ScpB DJ46_2969 PF02616 Segregation and condensation protein ScpA DJ46_297 PF01865 Protein of unknown function DUF47 DJ46_2971 PF03745 Domain of unknown function (DUF309) DJ46_2972 PF00583 Acetyltransferase (GNAT) family DJ46_2973 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DJ46_2974 PF06207 Protein of unknown function (DUF1002) DJ46_2976 PF03323 Bacillus/Clostridium GerA spore germination protein DJ46_2977 PF14097 Stage V sporulation protein AE1 DJ46_2978 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DJ46_2979 PF07451 Stage V sporulation protein AD (SpoVAD) DJ46_298 PF00905 Penicillin binding protein transpeptidase domain DJ46_298 PF00912 Transglycosylase DJ46_2980 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DJ46_2981 PF13782 Stage V sporulation protein AB DJ46_2982 PF12164 Stage V sporulation protein AA DJ46_2984 PF00209 Sodium:neurotransmitter symporter family DJ46_2985 PF04542 Sigma-70 region 2 DJ46_2985 PF04539 Sigma-70 region 3 DJ46_2985 PF04545 Sigma-70, region 4 DJ46_2986 PF13581 Histidine kinase-like ATPase domain DJ46_2987 PF01740 STAS domain DJ46_2988 PF07943 Penicillin-binding protein 5, C-terminal domain DJ46_2988 PF00768 D-alanyl-D-alanine carboxypeptidase DJ46_2989 PF00392 Bacterial regulatory proteins, gntR family DJ46_2990 PF00005 ABC transporter DJ46_2993 PF01047 MarR family DJ46_2995 PF00860 Permease family DJ46_2996 PF01544 CorA-like Mg2+ transporter protein DJ46_2997 PF00591 Glycosyl transferase family, a/b domain DJ46_2997 PF02885 Glycosyl transferase family, helical bundle domain DJ46_2997 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DJ46_2998 PF01048 Phosphorylase superfamily DJ46_2999 PF01676 Metalloenzyme superfamily DJ46_3 PF00199 Catalase DJ46_3 PF06628 Catalase-related immune-responsive DJ46_30 PF12911 N-terminal TM domain of oligopeptide transport permease C DJ46_30 PF00528 Binding-protein-dependent transport system inner membrane component DJ46_300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_300 PF00512 His Kinase A (phospho-acceptor) domain DJ46_300 PF00989 PAS fold DJ46_3001 PF00589 Phage integrase family DJ46_3001 PF02899 Phage integrase, N-terminal SAM-like domain DJ46_3002 PF14004 Protein of unknown function (DUF4227) DJ46_3003 PF01475 Ferric uptake regulator family DJ46_3004 PF01944 Stage II sporulation protein M DJ46_3006 PF00293 NUDIX domain DJ46_3007 PF13072 Mother cell inhibitor of FtsZ DJ46_3008 PF00248 Aldo/keto reductase family DJ46_3009 PF00248 Aldo/keto reductase family DJ46_301 PF01904 Protein of unknown function DUF72 DJ46_3010 PF13673 Acetyltransferase (GNAT) domain DJ46_3010 PF04229 GrpB protein DJ46_3012 PF00565 Staphylococcal nuclease homologue DJ46_3012 PF02872 5'-nucleotidase, C-terminal domain DJ46_3012 PF00746 LPXTG cell wall anchor motif DJ46_3012 PF00149 Calcineurin-like phosphoesterase DJ46_3014 PF12146 Serine aminopeptidase, S33 DJ46_3015 PF13726 Na+-H+ antiporter family DJ46_3015 PF03553 Na+/H+ antiporter family DJ46_3016 PF00356 Bacterial regulatory proteins, lacI family DJ46_3017 PF00583 Acetyltransferase (GNAT) family DJ46_3018 PF12146 Serine aminopeptidase, S33 DJ46_3019 PF10827 Protein of unknown function (DUF2552) DJ46_3021 PF01872 RibD C-terminal domain DJ46_3021 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DJ46_3022 PF00677 Lumazine binding domain DJ46_3023 PF00925 GTP cyclohydrolase II DJ46_3023 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DJ46_3025 PF00885 6,7-dimethyl-8-ribityllumazine synthase DJ46_3026 PF04055 Radical SAM superfamily DJ46_3026 PF06968 Biotin and Thiamin Synthesis associated domain DJ46_3027 PF13847 Methyltransferase domain DJ46_3028 PF08241 Methyltransferase domain DJ46_3028 PF12697 Alpha/beta hydrolase family DJ46_3029 PF00155 Aminotransferase class I and II DJ46_303 PF00589 Phage integrase family DJ46_3031 PF00202 Aminotransferase class-III DJ46_3034 PF00149 Calcineurin-like phosphoesterase DJ46_3034 PF02872 5'-nucleotidase, C-terminal domain DJ46_3036 PF01037 Lrp/AsnC ligand binding domain DJ46_3036 PF13404 AsnC-type helix-turn-helix domain DJ46_3039 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DJ46_3039 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DJ46_304 PF16736 Single Cache-like DJ46_304 PF00989 PAS fold DJ46_304 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_304 PF00512 His Kinase A (phospho-acceptor) domain DJ46_3040 PF00202 Aminotransferase class-III DJ46_3041 PF00696 Amino acid kinase family DJ46_3044 PF01118 Semialdehyde dehydrogenase, NAD binding domain DJ46_3044 PF02774 Semialdehyde dehydrogenase, dimerisation domain DJ46_3046 PF00106 short chain dehydrogenase DJ46_3047 PF00753 Metallo-beta-lactamase superfamily DJ46_3049 PF14748 Pyrroline-5-carboxylate reductase dimerisation DJ46_3049 PF03807 NADP oxidoreductase coenzyme F420-dependent DJ46_305 PF01048 Phosphorylase superfamily DJ46_3050 PF03313 Serine dehydratase alpha chain DJ46_3051 PF03315 Serine dehydratase beta chain DJ46_3051 PF01842 ACT domain DJ46_3052 PF00753 Metallo-beta-lactamase superfamily DJ46_3052 PF12706 Beta-lactamase superfamily domain DJ46_3054 PF00817 impB/mucB/samB family DJ46_3054 PF11799 impB/mucB/samB family C-terminal domain DJ46_3054 PF11798 IMS family HHH motif DJ46_3056 PF07687 Peptidase dimerisation domain DJ46_3056 PF01546 Peptidase family M20/M25/M40 DJ46_3057 PF13302 Acetyltransferase (GNAT) domain DJ46_3059 PF03734 L,D-transpeptidase catalytic domain DJ46_3060 PF06081 Aromatic acid exporter family member 1 DJ46_3060 PF11728 Putative aromatic acid exporter C-terminal domain DJ46_3061 PF00005 ABC transporter DJ46_3062 PF00528 Binding-protein-dependent transport system inner membrane component DJ46_3063 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJ46_3064 PF06491 Disulphide isomerase DJ46_3065 PF11208 Protein of unknown function (DUF2992) DJ46_3066 PF00293 NUDIX domain DJ46_3066 PF09297 NADH pyrophosphatase zinc ribbon domain DJ46_3067 PF01098 Cell cycle protein DJ46_3068 PF02817 e3 binding domain DJ46_3068 PF00364 Biotin-requiring enzyme DJ46_3068 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DJ46_3069 PF02780 Transketolase, C-terminal domain DJ46_3069 PF02779 Transketolase, pyrimidine binding domain DJ46_3070 PF00676 Dehydrogenase E1 component DJ46_3071 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DJ46_3071 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ46_3072 PF00871 Acetokinase family DJ46_3073 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DJ46_3073 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DJ46_3074 PF01515 Phosphate acetyl/butaryl transferase DJ46_3075 PF00989 PAS fold DJ46_3075 PF02954 Bacterial regulatory protein, Fis family DJ46_3075 PF00158 Sigma-54 interaction domain DJ46_3077 PF03009 Glycerophosphoryl diester phosphodiesterase family DJ46_3078 PF14174 YycC-like protein DJ46_308 PF09924 Uncharacterised conserved protein (DUF2156) DJ46_308 PF03706 Lysylphosphatidylglycerol synthase TM region DJ46_3080 PF00072 Response regulator receiver domain DJ46_3080 PF08769 Sporulation initiation factor Spo0A C terminal DJ46_3081 PF05580 SpoIVB peptidase S55 DJ46_3081 PF17820 PDZ domain DJ46_3082 PF13476 AAA domain DJ46_3083 PF02863 Arginine repressor, C-terminal domain DJ46_3083 PF01316 Arginine repressor, DNA binding domain DJ46_3084 PF01728 FtsJ-like methyltransferase DJ46_3084 PF01479 S4 domain DJ46_3085 PF02780 Transketolase, C-terminal domain DJ46_3085 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DJ46_3085 PF02779 Transketolase, pyrimidine binding domain DJ46_3086 PF00348 Polyprenyl synthetase DJ46_3087 PF02609 Exonuclease VII small subunit DJ46_3088 PF13742 OB-fold nucleic acid binding domain DJ46_3088 PF02601 Exonuclease VII, large subunit DJ46_3089 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DJ46_3089 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DJ46_3090 PF01029 NusB family DJ46_3091 PF03780 Asp23 family, cell envelope-related function DJ46_3092 PF00289 Biotin carboxylase, N-terminal domain DJ46_3092 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DJ46_3092 PF02785 Biotin carboxylase C-terminal domain DJ46_3093 PF00364 Biotin-requiring enzyme DJ46_3095 PF12685 SpoIIIAH-like protein DJ46_3097 PF09581 Stage III sporulation protein AF (Spore_III_AF) DJ46_3098 PF09546 Stage III sporulation protein AE (spore_III_AE) DJ46_3099 PF06686 Stage III sporulation protein AC/AD protein family DJ46_31 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DJ46_31 PF00005 ABC transporter DJ46_3100 PF06686 Stage III sporulation protein AC/AD protein family DJ46_3101 PF09548 Stage III sporulation protein AB (spore_III_AB) DJ46_3106 PF09285 Elongation factor P, C-terminal DJ46_3106 PF08207 Elongation factor P (EF-P) KOW-like domain DJ46_3106 PF01132 Elongation factor P (EF-P) OB domain DJ46_3107 PF00557 Metallopeptidase family M24 DJ46_3107 PF01321 Creatinase/Prolidase N-terminal domain DJ46_3108 PF01220 Dehydroquinase class II DJ46_3109 PF11085 Conserved membrane protein YqhR DJ46_311 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DJ46_311 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DJ46_3110 PF07136 Protein of unknown function (DUF1385) DJ46_3111 PF13419 Haloacid dehalogenase-like hydrolase DJ46_3113 PF02742 Iron dependent repressor, metal binding and dimerisation domain DJ46_3113 PF01325 Iron dependent repressor, N-terminal DNA binding domain DJ46_3116 PF03099 Biotin/lipoate A/B protein ligase family DJ46_3117 PF00581 Rhodanese-like domain DJ46_3118 PF00356 Bacterial regulatory proteins, lacI family DJ46_3118 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DJ46_312 PF07943 Penicillin-binding protein 5, C-terminal domain DJ46_312 PF00768 D-alanyl-D-alanine carboxypeptidase DJ46_3120 PF00893 Small Multidrug Resistance protein DJ46_3121 PF00893 Small Multidrug Resistance protein DJ46_3128 PF00005 ABC transporter DJ46_3129 PF00392 Bacterial regulatory proteins, gntR family DJ46_313 PF07670 Nucleoside recognition DJ46_3132 PF02347 Glycine cleavage system P-protein DJ46_3133 PF02347 Glycine cleavage system P-protein DJ46_3134 PF08669 Glycine cleavage T-protein C-terminal barrel domain DJ46_3134 PF01571 Aminomethyltransferase folate-binding domain DJ46_3135 PF00271 Helicase conserved C-terminal domain DJ46_3135 PF00176 SNF2 family N-terminal domain DJ46_3136 PF11079 Bacterial protein YqhG of unknown function DJ46_314 PF07670 Nucleoside recognition DJ46_3140 PF14038 YqzE-like protein DJ46_3141 PF01202 Shikimate kinase DJ46_3146 PF07963 Prokaryotic N-terminal methylation motif DJ46_3148 PF00482 Type II secretion system (T2SS), protein F DJ46_3149 PF00437 Type II/IV secretion system protein DJ46_315 PF01479 S4 domain DJ46_315 PF00849 RNA pseudouridylate synthase DJ46_3151 PF11117 Protein of unknown function (DUF2626) DJ46_3152 PF00375 Sodium:dicarboxylate symporter family DJ46_3159 PF03033 Glycosyltransferase family 28 N-terminal domain DJ46_3159 PF04101 Glycosyltransferase family 28 C-terminal domain DJ46_316 PF00578 AhpC/TSA family DJ46_3160 PF02310 B12 binding domain DJ46_3160 PF02607 B12 binding domain DJ46_3160 PF02574 Homocysteine S-methyltransferase DJ46_3160 PF02965 Vitamin B12 dependent methionine synthase, activation domain DJ46_3160 PF00809 Pterin binding enzyme DJ46_3161 PF02574 Homocysteine S-methyltransferase DJ46_3161 PF02219 Methylenetetrahydrofolate reductase DJ46_3162 PF01053 Cys/Met metabolism PLP-dependent enzyme DJ46_3163 PF01053 Cys/Met metabolism PLP-dependent enzyme DJ46_3165 PF01022 Bacterial regulatory protein, arsR family DJ46_3167 PF00753 Metallo-beta-lactamase superfamily DJ46_3168 PF10958 Protein of unknown function (DUF2759) DJ46_3169 PF00480 ROK family DJ46_317 PF05140 ResB-like family DJ46_3170 PF06014 Bacterial protein of unknown function (DUF910) DJ46_3171 PF01812 5-formyltetrahydrofolate cyclo-ligase family DJ46_3172 PF00471 Ribosomal protein L33 DJ46_3174 PF00483 Nucleotidyl transferase DJ46_3175 PF01895 PhoU domain DJ46_3176 PF00005 ABC transporter DJ46_3177 PF00528 Binding-protein-dependent transport system inner membrane component DJ46_3178 PF00528 Binding-protein-dependent transport system inner membrane component DJ46_3179 PF12849 PBP superfamily domain DJ46_318 PF01578 Cytochrome C assembly protein DJ46_3181 PF07690 Major Facilitator Superfamily DJ46_3182 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DJ46_3182 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DJ46_3186 PF04551 GcpE protein DJ46_3187 PF01475 Ferric uptake regulator family DJ46_3188 PF00950 ABC 3 transport family DJ46_3189 PF00005 ABC transporter DJ46_319 PF00486 Transcriptional regulatory protein, C terminal DJ46_319 PF00072 Response regulator receiver domain DJ46_3190 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DJ46_3190 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DJ46_3191 PF11116 Protein of unknown function (DUF2624) DJ46_3192 PF01261 Xylose isomerase-like TIM barrel DJ46_3193 PF00271 Helicase conserved C-terminal domain DJ46_3193 PF00270 DEAD/DEAH box helicase DJ46_3195 PF02401 LytB protein DJ46_3196 PF01784 NIF3 (NGG1p interacting factor 3) DJ46_3197 PF04816 tRNA (adenine(22)-N(1))-methyltransferase DJ46_3198 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DJ46_3199 PF04545 Sigma-70, region 4 DJ46_3199 PF04539 Sigma-70 region 3 DJ46_3199 PF04542 Sigma-70 region 2 DJ46_3199 PF00140 Sigma-70 factor, region 1.2 DJ46_3199 PF03979 Sigma-70 factor, region 1.1 DJ46_32 PF00005 ABC transporter DJ46_32 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DJ46_320 PF00989 PAS fold DJ46_320 PF00512 His Kinase A (phospho-acceptor) domain DJ46_320 PF18698 Histidine kinase sensor domain DJ46_320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_320 PF00672 HAMP domain DJ46_3200 PF10410 DnaB-helicase binding domain of primase DJ46_3200 PF08275 DNA primase catalytic core, N-terminal domain DJ46_3200 PF01807 CHC2 zinc finger DJ46_3201 PF03618 Kinase/pyrophosphorylase DJ46_3202 PF08279 HTH domain DJ46_3202 PF00571 CBS domain DJ46_3203 PF02565 Recombination protein O C terminal DJ46_3203 PF11967 Recombination protein O N terminal DJ46_3205 PF07650 KH domain DJ46_3205 PF01926 50S ribosome-binding GTPase DJ46_3206 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DJ46_3207 PF01219 Prokaryotic diacylglycerol kinase DJ46_3208 PF02130 Uncharacterized protein family UPF0054 DJ46_3209 PF07698 7TM receptor with intracellular HD hydrolase DJ46_3209 PF01966 HD domain DJ46_3209 PF07697 7TM-HD extracellular DJ46_321 PF01923 Cobalamin adenosyltransferase DJ46_3210 PF02562 PhoH-like protein DJ46_3211 PF06898 Putative stage IV sporulation protein YqfD DJ46_3212 PF07873 YabP family DJ46_3213 PF09424 Yqey-like protein DJ46_3214 PF01165 Ribosomal protein S21 DJ46_3215 PF00919 Uncharacterized protein family UPF0004 DJ46_3215 PF01938 TRAM domain DJ46_3215 PF04055 Radical SAM superfamily DJ46_3216 PF04452 RNA methyltransferase DJ46_3218 PF00684 DnaJ central domain DJ46_3218 PF01556 DnaJ C terminal domain DJ46_3218 PF00226 DnaJ domain DJ46_3219 PF00012 Hsp70 protein DJ46_3220 PF01025 GrpE DJ46_3221 PF01628 HrcA protein C terminal domain DJ46_3222 PF06969 HemN C-terminal domain DJ46_3222 PF04055 Radical SAM superfamily DJ46_3223 PF01638 HxlR-like helix-turn-helix DJ46_3224 PF00679 Elongation factor G C-terminus DJ46_3224 PF00009 Elongation factor Tu GTP binding domain DJ46_3224 PF03144 Elongation factor Tu domain 2 DJ46_3224 PF06421 GTP-binding protein LepA C-terminus DJ46_3226 PF03418 Germination protease DJ46_3227 PF01649 Ribosomal protein S20 DJ46_3228 PF06144 DNA polymerase III, delta subunit DJ46_3229 PF14141 YqzM-like protein DJ46_3230 PF13567 Domain of unknown function (DUF4131) DJ46_3230 PF03772 Competence protein DJ46_3230 PF00753 Metallo-beta-lactamase superfamily DJ46_3231 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DJ46_3232 PF10531 SLBB domain DJ46_3233 PF14748 Pyrroline-5-carboxylate reductase dimerisation DJ46_3233 PF03807 NADP oxidoreductase coenzyme F420-dependent DJ46_3234 PF13649 Methyltransferase domain DJ46_3236 PF01966 HD domain DJ46_3237 PF01467 Cytidylyltransferase-like DJ46_3238 PF01985 CRS1 / YhbY (CRM) domain DJ46_3239 PF08501 Shikimate dehydrogenase substrate binding domain DJ46_3239 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DJ46_3239 PF01488 Shikimate / quinate 5-dehydrogenase DJ46_324 PF12822 ECF transporter, substrate-specific component DJ46_3240 PF01926 50S ribosome-binding GTPase DJ46_3243 PF02666 Phosphatidylserine decarboxylase DJ46_3244 PF04542 Sigma-70 region 2 DJ46_3244 PF04545 Sigma-70, region 4 DJ46_3247 PF16244 Domain of unknown function (DUF4901) DJ46_3248 PF00471 Ribosomal protein L33 DJ46_3249 PF00881 Nitroreductase family DJ46_3250 PF04607 Region found in RelA / SpoT proteins DJ46_3252 PF00245 Alkaline phosphatase DJ46_3254 PF08386 TAP-like protein DJ46_3254 PF00561 alpha/beta hydrolase fold DJ46_326 PF14493 Helix-turn-helix domain DJ46_3261 PF02225 PA domain DJ46_3261 PF05922 Peptidase inhibitor I9 DJ46_3261 PF00082 Subtilase family DJ46_3261 PF13860 FlgD Ig-like domain DJ46_3262 PF00351 Biopterin-dependent aromatic amino acid hydroxylase DJ46_3264 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ46_3265 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ46_3266 PF07681 DoxX DJ46_327 PF00270 DEAD/DEAH box helicase DJ46_327 PF00271 Helicase conserved C-terminal domain DJ46_3272 PF00005 ABC transporter DJ46_3273 PF01032 FecCD transport family DJ46_3274 PF01497 Periplasmic binding protein DJ46_3275 PF14143 YrhC-like protein DJ46_3276 PF00171 Aldehyde dehydrogenase family DJ46_3276 PF00465 Iron-containing alcohol dehydrogenase DJ46_3277 PF01053 Cys/Met metabolism PLP-dependent enzyme DJ46_3278 PF00291 Pyridoxal-phosphate dependent enzyme DJ46_3279 PF01048 Phosphorylase superfamily DJ46_328 PF02517 CPBP intramembrane metalloprotease DJ46_3280 PF08241 Methyltransferase domain DJ46_3283 PF03717 Penicillin-binding Protein dimerisation domain DJ46_3283 PF00905 Penicillin binding protein transpeptidase domain DJ46_3284 PF01272 Transcription elongation factor, GreA/GreB, C-term DJ46_3284 PF03449 Transcription elongation factor, N-terminal DJ46_3285 PF00485 Phosphoribulokinase / Uridine kinase family DJ46_3289 PF02618 YceG-like family DJ46_3290 PF06949 Protein of unknown function (DUF1292) DJ46_3291 PF03652 Holliday junction resolvase DJ46_3292 PF06135 IreB regulatory phosphoprotein DJ46_3293 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DJ46_3293 PF01411 tRNA synthetases class II (A) DJ46_3293 PF02272 DHHA1 domain DJ46_3295 PF01594 AI-2E family transporter DJ46_3299 PF14490 Helix-hairpin-helix containing domain DJ46_3299 PF13538 UvrD-like helicase C-terminal domain DJ46_3299 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain DJ46_33 PF01554 MatE DJ46_330 PF00149 Calcineurin-like phosphoesterase DJ46_3302 PF00266 Aminotransferase class-V DJ46_3303 PF02082 Transcriptional regulator DJ46_3304 PF12002 MgsA AAA+ ATPase C terminal DJ46_3304 PF05496 Holliday junction DNA helicase RuvB P-loop domain DJ46_3304 PF16193 AAA C-terminal domain DJ46_3306 PF00899 ThiF family DJ46_3307 PF02938 GAD domain DJ46_3307 PF00152 tRNA synthetases class II (D, K and N) DJ46_3307 PF01336 OB-fold nucleic acid binding domain DJ46_3308 PF13393 Histidyl-tRNA synthetase DJ46_3308 PF03129 Anticodon binding domain DJ46_331 PF02607 B12 binding domain DJ46_331 PF13411 MerR HTH family regulatory protein DJ46_331 PF02310 B12 binding domain DJ46_3310 PF02580 D-Tyr-tRNA(Tyr) deacylase DJ46_3311 PF13291 ACT domain DJ46_3311 PF04607 Region found in RelA / SpoT proteins DJ46_3311 PF02824 TGS domain DJ46_3312 PF00156 Phosphoribosyl transferase domain DJ46_3313 PF10141 Single-strand DNA-specific exonuclease, C terminal domain DJ46_3313 PF01368 DHH family DJ46_3313 PF02272 DHHA1 domain DJ46_3313 PF17768 RecJ OB domain DJ46_3314 PF16916 Dimerisation domain of Zinc Transporter DJ46_3314 PF01545 Cation efflux family DJ46_3315 PF07549 SecD/SecF GG Motif DJ46_3315 PF02355 Protein export membrane protein DJ46_3316 PF13797 Post-transcriptional regulator DJ46_3317 PF01943 Polysaccharide biosynthesis protein DJ46_3317 PF14667 Polysaccharide biosynthesis C-terminal domain DJ46_3318 PF04239 Protein of unknown function (DUF421) DJ46_332 PF05389 Negative regulator of genetic competence (MecA) DJ46_3320 PF02699 Preprotein translocase subunit DJ46_3321 PF01702 Queuine tRNA-ribosyltransferase DJ46_3322 PF02547 Queuosine biosynthesis protein DJ46_3323 PF11146 Protein of unknown function (DUF2905) DJ46_3324 PF05491 RuvB C-terminal winged helix domain DJ46_3324 PF05496 Holliday junction DNA helicase RuvB P-loop domain DJ46_3324 PF17864 RuvB AAA lid domain DJ46_3325 PF07499 RuvA, C-terminal domain DJ46_3325 PF01330 RuvA N terminal domain DJ46_3326 PF01497 Periplasmic binding protein DJ46_3328 PF00892 EamA-like transporter family DJ46_3329 PF00892 EamA-like transporter family DJ46_333 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DJ46_333 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DJ46_3330 PF01022 Bacterial regulatory protein, arsR family DJ46_3333 PF01476 LysM domain DJ46_3334 PF02445 Quinolinate synthetase A protein DJ46_3335 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DJ46_3335 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DJ46_3336 PF02910 Fumarate reductase flavoprotein C-term DJ46_3336 PF00890 FAD binding domain DJ46_3337 PF00266 Aminotransferase class-V DJ46_3338 PF08279 HTH domain DJ46_3338 PF02829 3H domain DJ46_3339 PF03473 MOSC domain DJ46_3339 PF03475 3-alpha domain DJ46_3340 PF01842 ACT domain DJ46_3340 PF00800 Prephenate dehydratase DJ46_3341 PF02687 FtsX-like permease family DJ46_3342 PF02687 FtsX-like permease family DJ46_3343 PF00005 ABC transporter DJ46_3344 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_3346 PF00486 Transcriptional regulatory protein, C terminal DJ46_3346 PF00072 Response regulator receiver domain DJ46_3347 PF01926 50S ribosome-binding GTPase DJ46_3347 PF01018 GTP1/OBG DJ46_3347 PF09269 Domain of unknown function (DUF1967) DJ46_3348 PF14682 Sporulation initiation phospho-transferase B, C-terminal DJ46_3348 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DJ46_3349 PF01016 Ribosomal L27 protein DJ46_3350 PF04327 Cysteine protease Prp DJ46_3351 PF00829 Ribosomal prokaryotic L21 protein DJ46_3352 PF00575 S1 RNA binding domain DJ46_3352 PF10150 Ribonuclease E/G family DJ46_3353 PF02163 Peptidase family M50 DJ46_3354 PF01551 Peptidase family M23 DJ46_3355 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DJ46_3356 PF03775 Septum formation inhibitor MinC, C-terminal domain DJ46_3358 PF04085 rod shape-determining protein MreC DJ46_3360 PF04002 RadC-like JAB domain DJ46_3361 PF02545 Maf-like protein DJ46_3363 PF02875 Mur ligase family, glutamate ligase domain DJ46_3363 PF08245 Mur ligase middle domain DJ46_3364 PF10458 Valyl tRNA synthetase tRNA binding arm DJ46_3364 PF00133 tRNA synthetases class I (I, L, M and V) DJ46_3364 PF08264 Anticodon-binding domain of tRNA DJ46_3366 PF01476 LysM domain DJ46_3367 PF00202 Aminotransferase class-III DJ46_3368 PF00490 Delta-aminolevulinic acid dehydratase DJ46_3369 PF02602 Uroporphyrinogen-III synthase HemD DJ46_3370 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DJ46_3370 PF03900 Porphobilinogen deaminase, C-terminal domain DJ46_3371 PF01578 Cytochrome C assembly protein DJ46_3372 PF01488 Shikimate / quinate 5-dehydrogenase DJ46_3372 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DJ46_3372 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DJ46_3373 PF01047 MarR family DJ46_3374 PF02566 OsmC-like protein DJ46_3375 PF01926 50S ribosome-binding GTPase DJ46_3376 PF00004 ATPase family associated with various cellular activities (AAA) DJ46_3376 PF02190 ATP-dependent protease La (LON) substrate-binding domain DJ46_3376 PF05362 Lon protease (S16) C-terminal proteolytic domain DJ46_3377 PF05362 Lon protease (S16) C-terminal proteolytic domain DJ46_3377 PF00004 ATPase family associated with various cellular activities (AAA) DJ46_3378 PF07724 AAA domain (Cdc48 subfamily) DJ46_3378 PF10431 C-terminal, D2-small domain, of ClpB protein DJ46_3378 PF06689 ClpX C4-type zinc finger DJ46_3379 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DJ46_3379 PF05698 Bacterial trigger factor protein (TF) C-terminus DJ46_3379 PF05697 Bacterial trigger factor protein (TF) DJ46_338 PF00710 Asparaginase, N-terminal DJ46_338 PF17763 Glutaminase/Asparaginase C-terminal domain DJ46_3383 PF08000 Bacterial PH domain DJ46_3383 PF11724 YvbH-like oligomerisation region DJ46_3387 PF12850 Calcineurin-like phosphoesterase superfamily domain DJ46_3388 PF01725 Ham1 family DJ46_3389 PF03725 3' exoribonuclease family, domain 2 DJ46_3389 PF01138 3' exoribonuclease family, domain 1 DJ46_3390 PF10646 Sporulation and spore germination DJ46_3391 PF01177 Asp/Glu/Hydantoin racemase DJ46_3392 PF07690 Major Facilitator Superfamily DJ46_3394 PF00440 Bacterial regulatory proteins, tetR family DJ46_3397 PF00196 Bacterial regulatory proteins, luxR family DJ46_3398 PF00860 Permease family DJ46_34 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ46_340 PF02224 Cytidylate kinase DJ46_3400 PF07969 Amidohydrolase family DJ46_3401 PF07969 Amidohydrolase family DJ46_3402 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ46_3404 PF00528 Binding-protein-dependent transport system inner membrane component DJ46_3405 PF00005 ABC transporter DJ46_3405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DJ46_3406 PF00005 ABC transporter DJ46_3406 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DJ46_3407 PF07694 5TMR of 5TMR-LYT DJ46_3407 PF06580 Histidine kinase DJ46_3407 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_3408 PF04397 LytTr DNA-binding domain DJ46_3408 PF00072 Response regulator receiver domain DJ46_341 PF00575 S1 RNA binding domain DJ46_3411 PF04024 PspC domain DJ46_3412 PF07883 Cupin domain DJ46_3412 PF01381 Helix-turn-helix DJ46_3413 PF13536 Putative multidrug resistance efflux transporter DJ46_3414 PF00230 Major intrinsic protein DJ46_3415 PF02082 Transcriptional regulator DJ46_3417 PF00005 ABC transporter DJ46_3417 PF13732 Domain of unknown function (DUF4162) DJ46_3418 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) DJ46_3419 PF00691 OmpA family DJ46_3419 PF13677 Membrane MotB of proton-channel complex MotA/MotB DJ46_342 PF01070 FMN-dependent dehydrogenase DJ46_3420 PF00691 OmpA family DJ46_3420 PF13677 Membrane MotB of proton-channel complex MotA/MotB DJ46_3421 PF01618 MotA/TolQ/ExbB proton channel family DJ46_3422 PF02557 D-alanyl-D-alanine carboxypeptidase DJ46_3423 PF03061 Thioesterase superfamily DJ46_3424 PF13183 4Fe-4S dicluster domain DJ46_3424 PF13085 2Fe-2S iron-sulfur cluster binding domain DJ46_3425 PF00890 FAD binding domain DJ46_3425 PF02910 Fumarate reductase flavoprotein C-term DJ46_3426 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DJ46_3427 PF10702 Protein of unknown function (DUF2507) DJ46_3428 PF01541 GIY-YIG catalytic domain DJ46_3428 PF08459 UvrC Helix-hairpin-helix N-terminal DJ46_3428 PF02151 UvrB/uvrC motif DJ46_3429 PF00085 Thioredoxin DJ46_343 PF14140 YpzI-like protein DJ46_3430 PF00766 Electron transfer flavoprotein FAD-binding domain DJ46_3430 PF01012 Electron transfer flavoprotein domain DJ46_3431 PF01012 Electron transfer flavoprotein domain DJ46_3432 PF00378 Enoyl-CoA hydratase/isomerase DJ46_3433 PF00440 Bacterial regulatory proteins, tetR family DJ46_3433 PF08359 YsiA-like protein, C-terminal region DJ46_3434 PF00501 AMP-binding enzyme DJ46_3434 PF13193 AMP-binding enzyme C-terminal domain DJ46_3436 PF01497 Periplasmic binding protein DJ46_3437 PF01032 FecCD transport family DJ46_3438 PF05163 DinB family DJ46_3444 PF00005 ABC transporter DJ46_3445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_3445 PF00512 His Kinase A (phospho-acceptor) domain DJ46_3446 PF00486 Transcriptional regulatory protein, C terminal DJ46_3446 PF00072 Response regulator receiver domain DJ46_3448 PF09962 Uncharacterized conserved protein (DUF2196) DJ46_3449 PF10672 S-adenosylmethionine-dependent methyltransferase DJ46_3449 PF17785 PUA-like domain DJ46_345 PF14045 YIEGIA protein DJ46_3451 PF03992 Antibiotic biosynthesis monooxygenase DJ46_3452 PF04203 Sortase domain DJ46_3453 PF00005 ABC transporter DJ46_3454 PF01032 FecCD transport family DJ46_3455 PF01497 Periplasmic binding protein DJ46_3456 PF05031 Iron Transport-associated domain DJ46_3458 PF05031 Iron Transport-associated domain DJ46_3459 PF05525 Branched-chain amino acid transport protein DJ46_3460 PF00849 RNA pseudouridylate synthase DJ46_3460 PF01479 S4 domain DJ46_3462 PF01713 Smr domain DJ46_3462 PF00488 MutS domain V DJ46_3463 PF14791 DNA polymerase beta thumb DJ46_3463 PF14716 Helix-hairpin-helix domain DJ46_3463 PF02811 PHP domain DJ46_3464 PF02674 Colicin V production protein DJ46_3465 PF05164 Cell division protein ZapA DJ46_3466 PF01351 Ribonuclease HII DJ46_3466 PF11858 Domain of unknown function (DUF3378) DJ46_347 PF01926 50S ribosome-binding GTPase DJ46_347 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DJ46_3470 PF00152 tRNA synthetases class II (D, K and N) DJ46_3470 PF01336 OB-fold nucleic acid binding domain DJ46_3471 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DJ46_3471 PF01588 Putative tRNA binding domain DJ46_3471 PF03147 Ferredoxin-fold anticodon binding domain DJ46_3471 PF03483 B3/4 domain DJ46_3471 PF03484 tRNA synthetase B5 domain DJ46_3472 PF01409 tRNA synthetases class II core domain (F) DJ46_3472 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DJ46_3473 PF08032 RNA 2'-O ribose methyltransferase substrate binding DJ46_3473 PF00588 SpoU rRNA Methylase family DJ46_3474 PF14098 Small, acid-soluble spore protein I DJ46_3475 PF01966 HD domain DJ46_348 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DJ46_348 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DJ46_3480 PF07690 Major Facilitator Superfamily DJ46_3482 PF16859 Tetracyclin repressor-like, C-terminal domain DJ46_3482 PF00440 Bacterial regulatory proteins, tetR family DJ46_3483 PF05343 M42 glutamyl aminopeptidase DJ46_3485 PF00453 Ribosomal protein L20 DJ46_3486 PF01632 Ribosomal protein L35 DJ46_3487 PF05198 Translation initiation factor IF-3, N-terminal domain DJ46_3487 PF00707 Translation initiation factor IF-3, C-terminal domain DJ46_3488 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DJ46_3488 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DJ46_3488 PF02824 TGS domain DJ46_3488 PF03129 Anticodon binding domain DJ46_3489 PF08812 YtxC-like family DJ46_3490 PF01695 IstB-like ATP binding protein DJ46_3490 PF07319 Primosomal protein DnaI N-terminus DJ46_3491 PF07261 Replication initiation and membrane attachment DJ46_3492 PF03477 ATP cone domain DJ46_3493 PF02675 S-adenosylmethionine decarboxylase DJ46_3494 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DJ46_3494 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DJ46_3495 PF01121 Dephospho-CoA kinase DJ46_3496 PF02659 Putative manganese efflux pump DJ46_3497 PF06827 Zinc finger found in FPG and IleRS DJ46_3497 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DJ46_3497 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DJ46_3498 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DJ46_3498 PF00476 DNA polymerase family A DJ46_3498 PF01367 5'-3' exonuclease, C-terminal SAM fold DJ46_3499 PF16736 Single Cache-like DJ46_3499 PF00512 His Kinase A (phospho-acceptor) domain DJ46_3499 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_3499 PF00989 PAS fold DJ46_350 PF10966 Protein of unknown function (DUF2768) DJ46_3500 PF00486 Transcriptional regulatory protein, C terminal DJ46_3500 PF00072 Response regulator receiver domain DJ46_3503 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DJ46_3503 PF00056 lactate/malate dehydrogenase, NAD binding domain DJ46_3504 PF00180 Isocitrate/isopropylmalate dehydrogenase DJ46_3505 PF00285 Citrate synthase, C-terminal domain DJ46_3506 PF04284 Protein of unknown function (DUF441) DJ46_3507 PF01594 AI-2E family transporter DJ46_3508 PF04186 FxsA cytoplasmic membrane protein DJ46_3509 PF00391 PEP-utilising enzyme, mobile domain DJ46_3509 PF00224 Pyruvate kinase, barrel domain DJ46_3509 PF02887 Pyruvate kinase, alpha/beta domain DJ46_3510 PF00365 Phosphofructokinase DJ46_3511 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DJ46_3512 PF17848 Acetyl-coA carboxylase zinc finger domain DJ46_3512 PF01039 Carboxyl transferase domain DJ46_3513 PF00392 Bacterial regulatory proteins, gntR family DJ46_3514 PF00390 Malic enzyme, N-terminal domain DJ46_3514 PF03949 Malic enzyme, NAD binding domain DJ46_3515 PF07733 Bacterial DNA polymerase III alpha NTPase domain DJ46_3515 PF02811 PHP domain DJ46_3515 PF01336 OB-fold nucleic acid binding domain DJ46_3515 PF14579 Helix-hairpin-helix motif DJ46_3515 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DJ46_3516 PF14034 Sporulation protein YtrH DJ46_3518 PF01368 DHH family DJ46_3518 PF02272 DHHA1 domain DJ46_3519 PF14007 YtpI-like protein DJ46_352 PF09547 Stage IV sporulation protein A (spore_IV_A) DJ46_3522 PF00571 CBS domain DJ46_3522 PF07085 DRTGG domain DJ46_3522 PF00392 Bacterial regulatory proteins, gntR family DJ46_3522 PF03061 Thioesterase superfamily DJ46_3525 PF01321 Creatinase/Prolidase N-terminal domain DJ46_3525 PF00557 Metallopeptidase family M24 DJ46_3526 PF11518 Protein of unknown function (DUF3221) DJ46_353 PF00216 Bacterial DNA-binding protein DJ46_3532 PF12746 GNAT acetyltransferase DJ46_3533 PF07883 Cupin domain DJ46_3535 PF01381 Helix-turn-helix DJ46_3537 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DJ46_3537 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DJ46_3539 PF00582 Universal stress protein family DJ46_354 PF01227 GTP cyclohydrolase I DJ46_3543 PF00206 Lyase DJ46_3543 PF14698 Argininosuccinate lyase C-terminal DJ46_3544 PF00764 Arginosuccinate synthase DJ46_3548 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DJ46_3548 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DJ46_3549 PF12787 EcsC protein family DJ46_355 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 DJ46_3552 PF00871 Acetokinase family DJ46_3553 PF02384 N-6 DNA Methylase DJ46_3554 PF08534 Redoxin DJ46_3555 PF09579 Sporulation protein YtfJ (Spore_YtfJ) DJ46_3557 PF01513 ATP-NAD kinase DJ46_3558 PF07969 Amidohydrolase family DJ46_356 PF01209 ubiE/COQ5 methyltransferase family DJ46_3560 PF00501 AMP-binding enzyme DJ46_3560 PF13193 AMP-binding enzyme C-terminal domain DJ46_3561 PF00269 Small, acid-soluble spore proteins, alpha/beta type DJ46_3562 PF02926 THUMP domain DJ46_3562 PF02568 Thiamine biosynthesis protein (ThiI) DJ46_3563 PF00266 Aminotransferase class-V DJ46_3564 PF06160 Septation ring formation regulator, EzrA DJ46_3565 PF03466 LysR substrate binding domain DJ46_3565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ46_3566 PF00892 EamA-like transporter family DJ46_3567 PF00440 Bacterial regulatory proteins, tetR family DJ46_3568 PF00440 Bacterial regulatory proteins, tetR family DJ46_3569 PF13185 GAF domain DJ46_357 PF00348 Polyprenyl synthetase DJ46_3570 PF01053 Cys/Met metabolism PLP-dependent enzyme DJ46_3571 PF01479 S4 domain DJ46_3571 PF00163 Ribosomal protein S4/S9 N-terminal domain DJ46_3574 PF01479 S4 domain DJ46_3574 PF00579 tRNA synthetases class I (W and Y) DJ46_3576 PF04542 Sigma-70 region 2 DJ46_3576 PF08281 Sigma-70, region 4 DJ46_3578 PF13193 AMP-binding enzyme C-terminal domain DJ46_3578 PF00501 AMP-binding enzyme DJ46_3579 PF00583 Acetyltransferase (GNAT) family DJ46_358 PF00334 Nucleoside diphosphate kinase DJ46_3580 PF00571 CBS domain DJ46_3581 PF00850 Histone deacetylase domain DJ46_3583 PF00486 Transcriptional regulatory protein, C terminal DJ46_3583 PF00072 Response regulator receiver domain DJ46_3584 PF00512 His Kinase A (phospho-acceptor) domain DJ46_3584 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_3584 PF00672 HAMP domain DJ46_3584 PF13426 PAS domain DJ46_3585 PF12796 Ankyrin repeats (3 copies) DJ46_3586 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DJ46_3587 PF01741 Large-conductance mechanosensitive channel, MscL DJ46_359 PF01264 Chorismate synthase DJ46_3592 PF00356 Bacterial regulatory proteins, lacI family DJ46_3593 PF07537 CamS sex pheromone cAM373 precursor DJ46_3594 PF11009 Protein of unknown function (DUF2847) DJ46_3596 PF02073 Thermophilic metalloprotease (M29) DJ46_36 PF03960 ArsC family DJ46_360 PF01761 3-dehydroquinate synthase DJ46_3600 PF13302 Acetyltransferase (GNAT) domain DJ46_3601 PF08245 Mur ligase middle domain DJ46_3601 PF02875 Mur ligase family, glutamate ligase domain DJ46_3601 PF01225 Mur ligase family, catalytic domain DJ46_3603 PF09397 Ftsk gamma domain DJ46_3603 PF01580 FtsK/SpoIIIE family DJ46_3603 PF17854 FtsK alpha domain DJ46_3605 PF14794 Domain of unknown function (DUF4479) DJ46_3605 PF01588 Putative tRNA binding domain DJ46_3606 PF07285 Protein of unknown function (DUF1444) DJ46_3607 PF00085 Thioredoxin DJ46_3608 PF01931 Protein of unknown function DUF84 DJ46_3609 PF05343 M42 glutamyl aminopeptidase DJ46_361 PF00155 Aminotransferase class I and II DJ46_3611 PF00753 Metallo-beta-lactamase superfamily DJ46_3612 PF02390 Putative methyltransferase DJ46_3613 PF14165 YtzH-like protein DJ46_3614 PF01636 Phosphotransferase enzyme family DJ46_3615 PF00128 Alpha amylase, catalytic domain DJ46_3615 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DJ46_3615 PF17999 Pullulanase N1-terminal domain DJ46_3616 PF02834 LigT like Phosphoesterase DJ46_3617 PF01546 Peptidase family M20/M25/M40 DJ46_3618 PF01546 Peptidase family M20/M25/M40 DJ46_3619 PF08220 DeoR-like helix-turn-helix domain DJ46_3620 PF01479 S4 domain DJ46_3620 PF00849 RNA pseudouridylate synthase DJ46_3621 PF14667 Polysaccharide biosynthesis C-terminal domain DJ46_3621 PF01943 Polysaccharide biosynthesis protein DJ46_3623 PF07690 Major Facilitator Superfamily DJ46_3624 PF01022 Bacterial regulatory protein, arsR family DJ46_3625 PF08327 Activator of Hsp90 ATPase homolog 1-like protein DJ46_3627 PF10957 Sporulation protein Cse60 DJ46_3629 PF02559 CarD-like/TRCF domain DJ46_363 PF08864 UPF0302 domain DJ46_363 PF08858 IDEAL domain DJ46_3631 PF06800 Sugar transport protein DJ46_3634 PF02391 MoaE protein DJ46_3635 PF03205 Molybdopterin guanine dinucleotide synthesis protein B DJ46_3636 PF00994 Probable molybdopterin binding domain DJ46_3636 PF03453 MoeA N-terminal region (domain I and II) DJ46_3636 PF03454 MoeA C-terminal region (domain IV) DJ46_3637 PF01967 MoaC family DJ46_3638 PF00899 ThiF family DJ46_3639 PF04055 Radical SAM superfamily DJ46_3639 PF06463 Molybdenum Cofactor Synthesis C DJ46_364 PF10673 Protein of unknown function (DUF2487) DJ46_3643 PF00581 Rhodanese-like domain DJ46_3645 PF00561 alpha/beta hydrolase fold DJ46_3646 PF03323 Bacillus/Clostridium GerA spore germination protein DJ46_3647 PF03845 Spore germination protein DJ46_365 PF00355 Rieske [2Fe-2S] domain DJ46_3652 PF13603 Leucyl-tRNA synthetase, Domain 2 DJ46_3652 PF09334 tRNA synthetases class I (M) DJ46_3652 PF00133 tRNA synthetases class I (I, L, M and V) DJ46_3652 PF08264 Anticodon-binding domain of tRNA DJ46_3653 PF07690 Major Facilitator Superfamily DJ46_3654 PF00999 Sodium/hydrogen exchanger family DJ46_3655 PF02080 TrkA-C domain DJ46_3656 PF00589 Phage integrase family DJ46_3658 PF00005 ABC transporter DJ46_3659 PF04235 Protein of unknown function (DUF418) DJ46_3659 PF07786 Protein of unknown function (DUF1624) DJ46_366 PF00033 Cytochrome b/b6/petB DJ46_3661 PF10732 Protein of unknown function (DUF2524) DJ46_3662 PF04055 Radical SAM superfamily DJ46_3662 PF16199 Radical_SAM C-terminal domain DJ46_3663 PF06962 Putative rRNA methylase DJ46_3664 PF13732 Domain of unknown function (DUF4162) DJ46_3664 PF00005 ABC transporter DJ46_3666 PF01177 Asp/Glu/Hydantoin racemase DJ46_3669 PF10776 Protein of unknown function (DUF2600) DJ46_367 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DJ46_367 PF00032 Cytochrome b(C-terminal)/b6/petD DJ46_3670 PF12146 Serine aminopeptidase, S33 DJ46_3671 PF00132 Bacterial transferase hexapeptide (six repeats) DJ46_3672 PF01569 PAP2 superfamily DJ46_3673 PF13439 Glycosyltransferase Family 4 DJ46_3673 PF00534 Glycosyl transferases group 1 DJ46_3674 PF12804 MobA-like NTP transferase domain DJ46_3675 PF00994 Probable molybdopterin binding domain DJ46_3678 PF00438 S-adenosylmethionine synthetase, N-terminal domain DJ46_3678 PF02772 S-adenosylmethionine synthetase, central domain DJ46_3678 PF02773 S-adenosylmethionine synthetase, C-terminal domain DJ46_3679 PF01293 Phosphoenolpyruvate carboxykinase DJ46_368 PF07187 Protein of unknown function (DUF1405) DJ46_3685 PF01784 NIF3 (NGG1p interacting factor 3) DJ46_3686 PF13426 PAS domain DJ46_3686 PF13188 PAS domain DJ46_3686 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_3686 PF00512 His Kinase A (phospho-acceptor) domain DJ46_3686 PF00989 PAS fold DJ46_3687 PF00989 PAS fold DJ46_3687 PF08447 PAS fold DJ46_3687 PF00512 His Kinase A (phospho-acceptor) domain DJ46_3687 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_3688 PF08386 TAP-like protein DJ46_3688 PF00561 alpha/beta hydrolase fold DJ46_3689 PF00884 Sulfatase DJ46_3694 PF00005 ABC transporter DJ46_3695 PF00528 Binding-protein-dependent transport system inner membrane component DJ46_37 PF03741 Integral membrane protein TerC family DJ46_370 PF09577 Sporulation protein YpjB (SpoYpjB) DJ46_3701 PF00293 NUDIX domain DJ46_3705 PF02664 S-Ribosylhomocysteinase (LuxS) DJ46_3706 PF00484 Carbonic anhydrase DJ46_3707 PF01809 Putative membrane protein insertion efficiency factor DJ46_3708 PF01654 Cytochrome bd terminal oxidase subunit I DJ46_3709 PF02322 Cytochrome bd terminal oxidase subunit II DJ46_371 PF04298 Putative neutral zinc metallopeptidase DJ46_3710 PF10676 Spore germination protein gerPA/gerPF DJ46_3713 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DJ46_3713 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DJ46_3718 PF04012 PspA/IM30 family DJ46_3722 PF17910 FeoB cytosolic helical domain DJ46_3722 PF07664 Ferrous iron transport protein B C terminus DJ46_3722 PF02421 Ferrous iron transport protein B DJ46_3722 PF07670 Nucleoside recognition DJ46_3724 PF09515 Thiamine transporter protein (Thia_YuaJ) DJ46_3725 PF00672 HAMP domain DJ46_3725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_3725 PF00512 His Kinase A (phospho-acceptor) domain DJ46_3726 PF00486 Transcriptional regulatory protein, C terminal DJ46_3726 PF00072 Response regulator receiver domain DJ46_373 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DJ46_373 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DJ46_3731 PF00156 Phosphoribosyl transferase domain DJ46_3732 PF00781 Diacylglycerol kinase catalytic domain DJ46_3736 PF00248 Aldo/keto reductase family DJ46_3739 PF09335 SNARE associated Golgi protein DJ46_374 PF03819 MazG nucleotide pyrophosphohydrolase domain DJ46_3740 PF00398 Ribosomal RNA adenine dimethylase DJ46_3741 PF02687 FtsX-like permease family DJ46_3742 PF00005 ABC transporter DJ46_3743 PF06445 GyrI-like small molecule binding domain DJ46_3743 PF12833 Helix-turn-helix domain DJ46_3744 PF00486 Transcriptional regulatory protein, C terminal DJ46_3744 PF00072 Response regulator receiver domain DJ46_3745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_3746 PF02687 FtsX-like permease family DJ46_3747 PF02687 FtsX-like permease family DJ46_3748 PF02687 FtsX-like permease family DJ46_3749 PF00005 ABC transporter DJ46_375 PF05173 Dihydrodipicolinate reductase, C-terminus DJ46_375 PF01113 Dihydrodipicolinate reductase, N-terminus DJ46_3750 PF02687 FtsX-like permease family DJ46_3751 PF02687 FtsX-like permease family DJ46_3753 PF02447 GntP family permease DJ46_3756 PF07071 KDGP aldolase DJ46_3757 PF03841 L-seryl-tRNA selenium transferase DJ46_3758 PF01979 Amidohydrolase family DJ46_376 PF02142 MGS-like domain DJ46_3761 PF02557 D-alanyl-D-alanine carboxypeptidase DJ46_3762 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_3762 PF00512 His Kinase A (phospho-acceptor) domain DJ46_3763 PF00486 Transcriptional regulatory protein, C terminal DJ46_3763 PF00072 Response regulator receiver domain DJ46_3764 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DJ46_3764 PF13378 Enolase C-terminal domain-like DJ46_3765 PF00501 AMP-binding enzyme DJ46_3765 PF13193 AMP-binding enzyme C-terminal domain DJ46_3766 PF00378 Enoyl-CoA hydratase/isomerase DJ46_3767 PF00561 alpha/beta hydrolase fold DJ46_3768 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DJ46_3768 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DJ46_3768 PF16582 Middle domain of thiamine pyrophosphate DJ46_3769 PF00425 chorismate binding enzyme DJ46_377 PF02585 GlcNAc-PI de-N-acetylase DJ46_3770 PF01040 UbiA prenyltransferase family DJ46_3771 PF01258 Prokaryotic dksA/traR C4-type zinc finger DJ46_3772 PF00313 'Cold-shock' DNA-binding domain DJ46_3776 PF00343 Carbohydrate phosphorylase DJ46_3777 PF00534 Glycosyl transferases group 1 DJ46_3777 PF08323 Starch synthase catalytic domain DJ46_3778 PF00483 Nucleotidyl transferase DJ46_3779 PF00483 Nucleotidyl transferase DJ46_378 PF00534 Glycosyl transferases group 1 DJ46_378 PF13439 Glycosyltransferase Family 4 DJ46_3780 PF02806 Alpha amylase, C-terminal all-beta domain DJ46_3780 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DJ46_3780 PF00128 Alpha amylase, catalytic domain DJ46_3781 PF00056 lactate/malate dehydrogenase, NAD binding domain DJ46_3781 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DJ46_379 PF13735 tRNA nucleotidyltransferase domain 2 putative DJ46_379 PF12627 Probable RNA and SrmB- binding site of polymerase A DJ46_379 PF01743 Poly A polymerase head domain DJ46_38 PF05389 Negative regulator of genetic competence (MecA) DJ46_380 PF08279 HTH domain DJ46_380 PF03099 Biotin/lipoate A/B protein ligase family DJ46_380 PF02237 Biotin protein ligase C terminal domain DJ46_3800 PF05698 Bacterial trigger factor protein (TF) C-terminus DJ46_3800 PF05697 Bacterial trigger factor protein (TF) DJ46_3809 PF02308 MgtC family DJ46_3810 PF08868 YugN-like family DJ46_3811 PF07885 Ion channel DJ46_3811 PF02254 TrkA-N domain DJ46_3812 PF00342 Phosphoglucose isomerase DJ46_3813 PF04070 Domain of unknown function (DUF378) DJ46_3814 PF00575 S1 RNA binding domain DJ46_3815 PF00155 Aminotransferase class I and II DJ46_3816 PF01037 Lrp/AsnC ligand binding domain DJ46_3817 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DJ46_3817 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DJ46_3818 PF08386 TAP-like protein DJ46_3818 PF00561 alpha/beta hydrolase fold DJ46_382 PF02548 Ketopantoate hydroxymethyltransferase DJ46_3820 PF00155 Aminotransferase class I and II DJ46_3823 PF08810 Kinase associated protein B DJ46_3824 PF00929 Exonuclease DJ46_3825 PF03600 Citrate transporter DJ46_3828 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DJ46_3828 PF03129 Anticodon binding domain DJ46_3829 PF03061 Thioesterase superfamily DJ46_383 PF02569 Pantoate-beta-alanine ligase DJ46_3831 PF02632 BioY family DJ46_3833 PF00483 Nucleotidyl transferase DJ46_3834 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DJ46_3834 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DJ46_3834 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DJ46_3834 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DJ46_3835 PF02457 DisA bacterial checkpoint controller nucleotide-binding DJ46_3835 PF10372 Bacterial membrane-spanning protein N-terminus DJ46_3836 PF02789 Cytosol aminopeptidase family, N-terminal domain DJ46_3836 PF00883 Cytosol aminopeptidase family, catalytic domain DJ46_3837 PF06725 3D domain DJ46_3839 PF00293 NUDIX domain DJ46_3839 PF13344 Haloacid dehalogenase-like hydrolase DJ46_384 PF02261 Aspartate decarboxylase DJ46_3840 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ46_3841 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ46_3843 PF06445 GyrI-like small molecule binding domain DJ46_3846 PF04463 Protein of unknown function (DUF523) DJ46_3849 PF01521 Iron-sulphur cluster biosynthesis DJ46_385 PF13307 Helicase C-terminal domain DJ46_385 PF04851 Type III restriction enzyme, res subunit DJ46_385 PF00929 Exonuclease DJ46_3850 PF01678 Diaminopimelate epimerase DJ46_3851 PF07293 Protein of unknown function (DUF1450) DJ46_3852 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ46_3853 PF00005 ABC transporter DJ46_3853 PF09383 NIL domain DJ46_3854 PF03649 Uncharacterised protein family (UPF0014) DJ46_3855 PF08274 PhnA Zinc-Ribbon DJ46_3855 PF03831 PhnA domain DJ46_386 PF14084 Protein of unknown function (DUF4264) DJ46_3863 PF07315 Protein of unknown function (DUF1462) DJ46_3864 PF01106 NifU-like domain DJ46_3867 PF04608 Phosphatidylglycerophosphatase A DJ46_3869 PF02525 Flavodoxin-like fold DJ46_3870 PF13344 Haloacid dehalogenase-like hydrolase DJ46_3872 PF01934 Protein of unknown function DUF86 DJ46_3873 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DJ46_3876 PF06265 Protein of unknown function (DUF1027) DJ46_3877 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) DJ46_3878 PF07739 TipAS antibiotic-recognition domain DJ46_3878 PF13411 MerR HTH family regulatory protein DJ46_3879 PF10086 YhfC intramembrane metalloprotease DJ46_388 PF00155 Aminotransferase class I and II DJ46_3883 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DJ46_3883 PF04055 Radical SAM superfamily DJ46_3884 PF01551 Peptidase family M23 DJ46_3886 PF08827 Domain of unknown function (DUF1805) DJ46_3887 PF02872 5'-nucleotidase, C-terminal domain DJ46_3888 PF03551 Transcriptional regulator PadR-like family DJ46_3889 PF04892 VanZ like family DJ46_389 PF07261 Replication initiation and membrane attachment DJ46_3890 PF01458 Uncharacterized protein family (UPF0051) DJ46_3891 PF01592 NifU-like N terminal domain DJ46_3892 PF00266 Aminotransferase class-V DJ46_3893 PF01458 Uncharacterized protein family (UPF0051) DJ46_3894 PF00005 ABC transporter DJ46_3895 PF03180 NLPA lipoprotein DJ46_3896 PF03180 NLPA lipoprotein DJ46_3897 PF00528 Binding-protein-dependent transport system inner membrane component DJ46_3898 PF09383 NIL domain DJ46_3898 PF00005 ABC transporter DJ46_39 PF13091 PLD-like domain DJ46_39 PF13396 Phospholipase_D-nuclease N-terminal DJ46_390 PF00633 Helix-hairpin-helix motif DJ46_390 PF00730 HhH-GPD superfamily base excision DNA repair protein DJ46_390 PF10576 Iron-sulfur binding domain of endonuclease III DJ46_3900 PF00085 Thioredoxin DJ46_3901 PF01751 Toprim domain DJ46_3902 PF01597 Glycine cleavage H-protein DJ46_3903 PF03960 ArsC family DJ46_3912 PF00056 lactate/malate dehydrogenase, NAD binding domain DJ46_3912 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DJ46_3917 PF00440 Bacterial regulatory proteins, tetR family DJ46_3917 PF13305 Tetracyclin repressor-like, C-terminal domain DJ46_3918 PF00753 Metallo-beta-lactamase superfamily DJ46_3919 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DJ46_3919 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DJ46_3919 PF02770 Acyl-CoA dehydrogenase, middle domain DJ46_392 PF00905 Penicillin binding protein transpeptidase domain DJ46_392 PF00912 Transglycosylase DJ46_3920 PF02803 Thiolase, C-terminal domain DJ46_3920 PF00108 Thiolase, N-terminal domain DJ46_3921 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DJ46_3921 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DJ46_3921 PF00378 Enoyl-CoA hydratase/isomerase DJ46_3922 PF14115 YuzL-like protein DJ46_3923 PF07943 Penicillin-binding protein 5, C-terminal domain DJ46_3923 PF00768 D-alanyl-D-alanine carboxypeptidase DJ46_3924 PF01619 Proline dehydrogenase DJ46_3925 PF10835 Protein of unknown function (DUF2573) DJ46_3926 PF01910 Thiamine-binding protein DJ46_3927 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ46_3927 PF02743 Cache domain DJ46_3927 PF00672 HAMP domain DJ46_393 PF03838 Recombination protein U DJ46_3931 PF07690 Major Facilitator Superfamily DJ46_3932 PF13520 Amino acid permease DJ46_3934 PF02096 60Kd inner membrane protein DJ46_3936 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DJ46_3936 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DJ46_394 PF10720 Protein of unknown function (DUF2515) DJ46_3943 PF09335 SNARE associated Golgi protein DJ46_3945 PF17969 L,D-transpeptidase C-terminal domain DJ46_3945 PF03734 L,D-transpeptidase catalytic domain DJ46_3946 PF00486 Transcriptional regulatory protein, C terminal DJ46_3946 PF00072 Response regulator receiver domain DJ46_3947 PF00512 His Kinase A (phospho-acceptor) domain DJ46_3947 PF00989 PAS fold DJ46_3947 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_3947 PF16736 Single Cache-like DJ46_3949 PF08264 Anticodon-binding domain of tRNA DJ46_3949 PF09334 tRNA synthetases class I (M) DJ46_3951 PF00672 HAMP domain DJ46_3951 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ46_3951 PF02743 Cache domain DJ46_3952 PF01883 Iron-sulfur cluster assembly protein DJ46_3953 PF02868 Thermolysin metallopeptidase, alpha-helical domain DJ46_3953 PF01447 Thermolysin metallopeptidase, catalytic domain DJ46_3953 PF03413 Peptidase propeptide and YPEB domain DJ46_3953 PF07504 Fungalysin/Thermolysin Propeptide Motif DJ46_3954 PF02678 Pirin DJ46_3954 PF17954 Quercetinase C-terminal cupin domain DJ46_3955 PF01047 MarR family DJ46_3957 PF00999 Sodium/hydrogen exchanger family DJ46_3958 PF02080 TrkA-C domain DJ46_3959 PF01235 Sodium:alanine symporter family DJ46_3960 PF00210 Ferritin-like domain DJ46_3963 PF03641 Possible lysine decarboxylase DJ46_3965 PF00210 Ferritin-like domain DJ46_3968 PF07662 Na+ dependent nucleoside transporter C-terminus DJ46_3968 PF01773 Na+ dependent nucleoside transporter N-terminus DJ46_3969 PF01773 Na+ dependent nucleoside transporter N-terminus DJ46_3969 PF07662 Na+ dependent nucleoside transporter C-terminus DJ46_3970 PF01235 Sodium:alanine symporter family DJ46_3971 PF01235 Sodium:alanine symporter family DJ46_3972 PF13460 NAD(P)H-binding DJ46_3977 PF00248 Aldo/keto reductase family DJ46_3978 PF07690 Major Facilitator Superfamily DJ46_3979 PF01638 HxlR-like helix-turn-helix DJ46_3980 PF07849 Protein of unknown function (DUF1641) DJ46_3981 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ46_3982 PF01479 S4 domain DJ46_3982 PF00579 tRNA synthetases class I (W and Y) DJ46_3983 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DJ46_3983 PF01565 FAD binding domain DJ46_3985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ46_3985 PF00672 HAMP domain DJ46_3985 PF17202 Single cache domain 3 DJ46_3987 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DJ46_3988 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DJ46_3991 PF13302 Acetyltransferase (GNAT) domain DJ46_3992 PF06146 Phosphate-starvation-inducible E DJ46_3995 PF00005 ABC transporter DJ46_3996 PF01032 FecCD transport family DJ46_3997 PF01032 FecCD transport family DJ46_3999 PF00072 Response regulator receiver domain DJ46_3999 PF00486 Transcriptional regulatory protein, C terminal DJ46_4 PF00909 Ammonium Transporter Family DJ46_4000 PF01668 SmpB protein DJ46_4001 PF00575 S1 RNA binding domain DJ46_4001 PF08206 Ribonuclease B OB domain DJ46_4001 PF17876 Cold shock domain DJ46_4001 PF00773 RNB domain DJ46_4002 PF12146 Serine aminopeptidase, S33 DJ46_4003 PF03840 Preprotein translocase SecG subunit DJ46_4004 PF04172 LrgB-like family DJ46_4005 PF03788 LrgA family DJ46_4006 PF01156 Inosine-uridine preferring nucleoside hydrolase DJ46_401 PF06908 YspA SLOG family DJ46_402 PF05103 DivIVA protein DJ46_4023 PF04860 Phage portal protein DJ46_4028 PF02899 Phage integrase, N-terminal SAM-like domain DJ46_4028 PF00589 Phage integrase family DJ46_4029 PF00113 Enolase, C-terminal TIM barrel domain DJ46_4029 PF03952 Enolase, N-terminal domain DJ46_403 PF02926 THUMP domain DJ46_403 PF01170 Putative RNA methylase family UPF0020 DJ46_4030 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DJ46_4030 PF01676 Metalloenzyme superfamily DJ46_4031 PF00121 Triosephosphate isomerase DJ46_4032 PF00162 Phosphoglycerate kinase DJ46_4033 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DJ46_4033 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DJ46_4034 PF04198 Putative sugar-binding domain DJ46_4036 PF04552 Sigma-54, DNA binding domain DJ46_4036 PF04963 Sigma-54 factor, core binding domain DJ46_4036 PF00309 Sigma-54 factor, Activator interacting domain (AID) DJ46_4040 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DJ46_4041 PF07451 Stage V sporulation protein AD (SpoVAD) DJ46_4042 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DJ46_4044 PF04239 Protein of unknown function (DUF421) DJ46_4045 PF00574 Clp protease DJ46_4046 PF00381 PTS HPr component phosphorylation site DJ46_4047 PF02650 WhiA C-terminal HTH domain DJ46_4047 PF14527 WhiA LAGLIDADG-like domain DJ46_4047 PF10298 WhiA N-terminal LAGLIDADG-like domain DJ46_4048 PF01933 Uncharacterised protein family UPF0052 DJ46_4049 PF03668 P-loop ATPase protein family DJ46_405 PF13307 Helicase C-terminal domain DJ46_4050 PF00293 NUDIX domain DJ46_4052 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ46_4054 PF14602 Hexapeptide repeat of succinyl-transferase DJ46_4055 PF13419 Haloacid dehalogenase-like hydrolase DJ46_4056 PF01790 Prolipoprotein diacylglyceryl transferase DJ46_4057 PF07475 HPr Serine kinase C-terminal domain DJ46_4057 PF02603 HPr Serine kinase N terminus DJ46_4058 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV DJ46_406 PF02074 Carboxypeptidase Taq (M32) metallopeptidase DJ46_4060 PF17760 UvrA interaction domain DJ46_4060 PF17755 UvrA DNA-binding domain DJ46_4060 PF00005 ABC transporter DJ46_4061 PF04851 Type III restriction enzyme, res subunit DJ46_4061 PF02151 UvrB/uvrC motif DJ46_4061 PF17757 UvrB interaction domain DJ46_4061 PF12344 Ultra-violet resistance protein B DJ46_4061 PF00271 Helicase conserved C-terminal domain DJ46_4062 PF07282 Putative transposase DNA-binding domain DJ46_4062 PF12323 Helix-turn-helix domain DJ46_4062 PF01385 Probable transposase DJ46_4065 PF13411 MerR HTH family regulatory protein DJ46_4065 PF07739 TipAS antibiotic-recognition domain DJ46_4069 PF03601 Conserved hypothetical protein 698 DJ46_4070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ46_4070 PF03466 LysR substrate binding domain DJ46_4071 PF09278 MerR, DNA binding DJ46_4071 PF00376 MerR family regulatory protein DJ46_4072 PF03358 NADPH-dependent FMN reductase DJ46_4074 PF01906 Putative heavy-metal-binding DJ46_4075 PF00005 ABC transporter DJ46_4075 PF00664 ABC transporter transmembrane region DJ46_4076 PF17820 PDZ domain DJ46_4077 PF17820 PDZ domain DJ46_4077 PF03572 Peptidase family S41 DJ46_4077 PF01471 Putative peptidoglycan binding domain DJ46_4078 PF18075 FtsX extracellular domain DJ46_4078 PF02687 FtsX-like permease family DJ46_4079 PF00005 ABC transporter DJ46_408 PF01636 Phosphotransferase enzyme family DJ46_4080 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DJ46_4081 PF00472 RF-1 domain DJ46_4081 PF03462 PCRF domain DJ46_4082 PF01043 SecA preprotein cross-linking domain DJ46_4082 PF07516 SecA Wing and Scaffold domain DJ46_4082 PF07517 SecA DEAD-like domain DJ46_4082 PF02810 SEC-C motif DJ46_4083 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DJ46_4083 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus DJ46_4084 PF00313 'Cold-shock' DNA-binding domain DJ46_4086 PF00271 Helicase conserved C-terminal domain DJ46_4086 PF04851 Type III restriction enzyme, res subunit DJ46_4087 PF00877 NlpC/P60 family DJ46_4087 PF01476 LysM domain DJ46_4088 PF01638 HxlR-like helix-turn-helix DJ46_4089 PF02645 Uncharacterised protein, DegV family COG1307 DJ46_409 PF00557 Metallopeptidase family M24 DJ46_4090 PF01205 Uncharacterized protein family UPF0029 DJ46_4090 PF09186 Domain of unknown function (DUF1949) DJ46_4091 PF03816 Cell envelope-related transcriptional attenuator domain DJ46_4092 PF02350 UDP-N-acetylglucosamine 2-epimerase DJ46_4093 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DJ46_4093 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DJ46_4093 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DJ46_4094 PF00953 Glycosyl transferase family 4 DJ46_4096 PF00874 PRD domain DJ46_4096 PF00158 Sigma-54 interaction domain DJ46_4096 PF03610 PTS system fructose IIA component DJ46_4098 PF02417 Chromate transporter DJ46_4099 PF04794 YdjC-like protein DJ46_41 PF08439 Oligopeptidase F DJ46_41 PF01432 Peptidase family M3 DJ46_410 PF00156 Phosphoribosyl transferase domain DJ46_4100 PF02056 Family 4 glycosyl hydrolase DJ46_4100 PF11975 Family 4 glycosyl hydrolase C-terminal domain DJ46_4101 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DJ46_4102 PF02378 Phosphotransferase system, EIIC DJ46_4103 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DJ46_4105 PF02675 S-adenosylmethionine decarboxylase DJ46_4106 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DJ46_4107 PF02378 Phosphotransferase system, EIIC DJ46_4108 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DJ46_4109 PF00375 Sodium:dicarboxylate symporter family DJ46_411 PF00860 Permease family DJ46_4111 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ46_4113 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ46_4113 PF03466 LysR substrate binding domain DJ46_4117 PF01654 Cytochrome bd terminal oxidase subunit I DJ46_4118 PF02322 Cytochrome bd terminal oxidase subunit II DJ46_412 PF04235 Protein of unknown function (DUF418) DJ46_4121 PF01964 Radical SAM ThiC family DJ46_4121 PF13667 ThiC-associated domain DJ46_4122 PF02652 L-lactate permease DJ46_4124 PF09988 Uncharacterized metal-binding protein (DUF2227) DJ46_4126 PF00884 Sulfatase DJ46_4127 PF01063 Amino-transferase class IV DJ46_4129 PF01476 LysM domain DJ46_4129 PF00877 NlpC/P60 family DJ46_4130 PF01773 Na+ dependent nucleoside transporter N-terminus DJ46_4130 PF07662 Na+ dependent nucleoside transporter C-terminus DJ46_4134 PF02028 BCCT, betaine/carnitine/choline family transporter DJ46_4135 PF06725 3D domain DJ46_4135 PF01476 LysM domain DJ46_414 PF00350 Dynamin family DJ46_4140 PF04434 SWIM zinc finger DJ46_4141 PF00176 SNF2 family N-terminal domain DJ46_4141 PF00271 Helicase conserved C-terminal domain DJ46_4141 PF12419 SNF2 Helicase protein DJ46_4147 PF04542 Sigma-70 region 2 DJ46_4147 PF04545 Sigma-70, region 4 DJ46_4148 PF04893 Yip1 domain DJ46_4149 PF02687 FtsX-like permease family DJ46_4149 PF12704 MacB-like periplasmic core domain DJ46_4150 PF00005 ABC transporter DJ46_4154 PF07690 Major Facilitator Superfamily DJ46_4157 PF16736 Single Cache-like DJ46_4157 PF00989 PAS fold DJ46_4157 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_4157 PF00512 His Kinase A (phospho-acceptor) domain DJ46_4158 PF00486 Transcriptional regulatory protein, C terminal DJ46_4158 PF00072 Response regulator receiver domain DJ46_4159 PF16363 GDP-mannose 4,6 dehydratase DJ46_416 PF00583 Acetyltransferase (GNAT) family DJ46_4160 PF03816 Cell envelope-related transcriptional attenuator domain DJ46_4161 PF07977 FabA-like domain DJ46_4162 PF02350 UDP-N-acetylglucosamine 2-epimerase DJ46_4163 PF00005 ABC transporter DJ46_4163 PF08239 Bacterial SH3 domain DJ46_4164 PF01061 ABC-2 type transporter DJ46_4165 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DJ46_4165 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DJ46_4165 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DJ46_417 PF10752 Protein of unknown function (DUF2533) DJ46_4173 PF12116 Stage III sporulation protein D DJ46_4175 PF01551 Peptidase family M23 DJ46_4177 PF00005 ABC transporter DJ46_4178 PF00072 Response regulator receiver domain DJ46_4178 PF04397 LytTr DNA-binding domain DJ46_4179 PF00005 ABC transporter DJ46_418 PF00581 Rhodanese-like domain DJ46_4180 PF08486 Stage II sporulation protein DJ46_4181 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DJ46_4183 PF06612 Protein of unknown function (DUF1146) DJ46_4186 PF00361 Proton-conducting membrane transporter DJ46_4187 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus DJ46_4187 PF00361 Proton-conducting membrane transporter DJ46_4187 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DJ46_4188 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DJ46_4189 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DJ46_4191 PF00146 NADH dehydrogenase DJ46_4192 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DJ46_4193 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DJ46_4194 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DJ46_4195 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DJ46_4196 PF03707 Bacterial signalling protein N terminal repeat DJ46_4196 PF00563 EAL domain DJ46_4196 PF00990 Diguanylate cyclase, GGDEF domain DJ46_4199 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DJ46_4199 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DJ46_4200 PF02874 ATP synthase alpha/beta family, beta-barrel domain DJ46_4200 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DJ46_4201 PF00231 ATP synthase DJ46_4202 PF00306 ATP synthase alpha/beta chain, C terminal domain DJ46_4202 PF02874 ATP synthase alpha/beta family, beta-barrel domain DJ46_4202 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DJ46_4203 PF00213 ATP synthase delta (OSCP) subunit DJ46_4204 PF00430 ATP synthase B/B' CF(0) DJ46_4205 PF00137 ATP synthase subunit C DJ46_4206 PF00119 ATP synthase A chain DJ46_4207 PF03899 ATP synthase I chain DJ46_421 PF03738 Glutathionylspermidine synthase preATP-grasp DJ46_4210 PF00464 Serine hydroxymethyltransferase DJ46_4211 PF04260 Protein of unknown function (DUF436) DJ46_4212 PF02502 Ribose/Galactose Isomerase DJ46_4213 PF01451 Low molecular weight phosphotyrosine protein phosphatase DJ46_4214 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DJ46_4215 PF07681 DoxX DJ46_4216 PF01613 Flavin reductase like domain DJ46_4218 PF02659 Putative manganese efflux pump DJ46_4219 PF01300 Telomere recombination DJ46_4219 PF03481 Putative GTP-binding controlling metal-binding DJ46_4221 PF09551 Stage II sporulation protein R (spore_II_R) DJ46_4222 PF13847 Methyltransferase domain DJ46_4222 PF17827 PrmC N-terminal domain DJ46_4223 PF00472 RF-1 domain DJ46_4223 PF03462 PCRF domain DJ46_4224 PF00265 Thymidine kinase DJ46_4225 PF01197 Ribosomal protein L31 DJ46_4226 PF07498 Rho termination factor, N-terminal domain DJ46_4226 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DJ46_4226 PF07497 Rho termination factor, RNA-binding domain DJ46_4227 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DJ46_4228 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DJ46_4229 PF01116 Fructose-bisphosphate aldolase class-II DJ46_423 PF00690 Cation transporter/ATPase, N-terminus DJ46_423 PF00689 Cation transporting ATPase, C-terminus DJ46_4230 PF00072 Response regulator receiver domain DJ46_4231 PF10740 Domain of unknown function (DUF2529) DJ46_4232 PF06418 CTP synthase N-terminus DJ46_4232 PF00117 Glutamine amidotransferase class-I DJ46_4233 PF05066 HB1, ASXL, restriction endonuclease HTH domain DJ46_4235 PF02770 Acyl-CoA dehydrogenase, middle domain DJ46_4235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DJ46_4235 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DJ46_4236 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DJ46_4236 PF02770 Acyl-CoA dehydrogenase, middle domain DJ46_4236 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DJ46_4237 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DJ46_4237 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DJ46_4238 PF02803 Thiolase, C-terminal domain DJ46_4238 PF00108 Thiolase, N-terminal domain DJ46_4239 PF02754 Cysteine-rich domain DJ46_4239 PF13183 4Fe-4S dicluster domain DJ46_424 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DJ46_424 PF01367 5'-3' exonuclease, C-terminal SAM fold DJ46_4240 PF13091 PLD-like domain DJ46_4241 PF03851 UV-endonuclease UvdE DJ46_4242 PF00990 Diguanylate cyclase, GGDEF domain DJ46_4242 PF03707 Bacterial signalling protein N terminal repeat DJ46_4242 PF00563 EAL domain DJ46_4246 PF00072 Response regulator receiver domain DJ46_4246 PF00196 Bacterial regulatory proteins, luxR family DJ46_4247 PF07730 Histidine kinase DJ46_4247 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_4249 PF00005 ABC transporter DJ46_4250 PF00557 Metallopeptidase family M24 DJ46_4253 PF02324 Glycosyl hydrolase family 70 DJ46_4253 PF01473 Putative cell wall binding repeat DJ46_4254 PF04389 Peptidase family M28 DJ46_4254 PF02225 PA domain DJ46_4258 PF04542 Sigma-70 region 2 DJ46_4258 PF08281 Sigma-70, region 4 DJ46_4259 PF00750 tRNA synthetases class I (R) DJ46_4259 PF03485 Arginyl tRNA synthetase N terminal domain DJ46_4259 PF05746 DALR anticodon binding domain DJ46_4260 PF09148 Domain of unknown function (DUF1934) DJ46_4261 PF02016 LD-carboxypeptidase N-terminal domain DJ46_4261 PF17676 LD-carboxypeptidase C-terminal domain DJ46_4264 PF00491 Arginase family DJ46_4265 PF17284 Spermidine synthase tetramerisation domain DJ46_4266 PF07690 Major Facilitator Superfamily DJ46_4267 PF13411 MerR HTH family regulatory protein DJ46_4268 PF03009 Glycerophosphoryl diester phosphodiesterase family DJ46_4269 PF00912 Transglycosylase DJ46_4269 PF00905 Penicillin binding protein transpeptidase domain DJ46_4270 PF08741 YwhD family DJ46_4271 PF02163 Peptidase family M50 DJ46_4272 PF01361 Tautomerase enzyme DJ46_4273 PF01966 HD domain DJ46_4274 PF01497 Periplasmic binding protein DJ46_4275 PF00005 ABC transporter DJ46_4276 PF01032 FecCD transport family DJ46_4277 PF01032 FecCD transport family DJ46_4278 PF01032 FecCD transport family DJ46_4279 PF07293 Protein of unknown function (DUF1450) DJ46_4282 PF03099 Biotin/lipoate A/B protein ligase family DJ46_4283 PF01515 Phosphate acetyl/butaryl transferase DJ46_4285 PF07943 Penicillin-binding protein 5, C-terminal domain DJ46_4285 PF00768 D-alanyl-D-alanine carboxypeptidase DJ46_4286 PF07486 Cell Wall Hydrolase DJ46_4287 PF09671 Spore coat protein (Spore_GerQ) DJ46_4288 PF04241 Protein of unknown function (DUF423) DJ46_4290 PF07885 Ion channel DJ46_4290 PF02254 TrkA-N domain DJ46_4291 PF00860 Permease family DJ46_4293 PF12823 Domain of unknown function (DUF3817) DJ46_4294 PF03167 Uracil DNA glycosylase superfamily DJ46_4295 PF12679 ABC-2 family transporter protein DJ46_4296 PF00005 ABC transporter DJ46_4297 PF13472 GDSL-like Lipase/Acylhydrolase family DJ46_4298 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DJ46_4298 PF00356 Bacterial regulatory proteins, lacI family DJ46_4300 PF01842 ACT domain DJ46_4300 PF00742 Homoserine dehydrogenase DJ46_4300 PF03447 Homoserine dehydrogenase, NAD binding domain DJ46_4301 PF04204 Homoserine O-succinyltransferase DJ46_4302 PF01053 Cys/Met metabolism PLP-dependent enzyme DJ46_4304 PF13419 Haloacid dehalogenase-like hydrolase DJ46_4305 PF00027 Cyclic nucleotide-binding domain DJ46_4306 PF02525 Flavodoxin-like fold DJ46_4307 PF00196 Bacterial regulatory proteins, luxR family DJ46_4307 PF00072 Response regulator receiver domain DJ46_4308 PF07730 Histidine kinase DJ46_4308 PF13185 GAF domain DJ46_4309 PF13185 GAF domain DJ46_4309 PF07730 Histidine kinase DJ46_431 PF02397 Bacterial sugar transferase DJ46_4310 PF08543 Phosphomethylpyrimidine kinase DJ46_4311 PF07694 5TMR of 5TMR-LYT DJ46_4311 PF00990 Diguanylate cyclase, GGDEF domain DJ46_4312 PF04328 Selenoprotein, putative DJ46_4313 PF02554 Carbon starvation protein CstA DJ46_4313 PF13722 5TM C-terminal transporter carbon starvation CstA DJ46_4314 PF04397 LytTr DNA-binding domain DJ46_4314 PF00072 Response regulator receiver domain DJ46_4315 PF07690 Major Facilitator Superfamily DJ46_4316 PF03808 Glycosyl transferase WecB/TagA/CpsF family DJ46_4320 PF03458 UPF0126 domain DJ46_4321 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ46_4323 PF03061 Thioesterase superfamily DJ46_4325 PF00535 Glycosyl transferase family 2 DJ46_4326 PF12848 ABC transporter DJ46_4326 PF00005 ABC transporter DJ46_4331 PF00535 Glycosyl transferase family 2 DJ46_4332 PF00440 Bacterial regulatory proteins, tetR family DJ46_4333 PF00873 AcrB/AcrD/AcrF family DJ46_4334 PF01641 SelR domain DJ46_4334 PF01625 Peptide methionine sulfoxide reductase DJ46_4335 PF01594 AI-2E family transporter DJ46_4336 PF04172 LrgB-like family DJ46_4337 PF03788 LrgA family DJ46_4338 PF00072 Response regulator receiver domain DJ46_4338 PF04397 LytTr DNA-binding domain DJ46_4339 PF06580 Histidine kinase DJ46_4339 PF07694 5TMR of 5TMR-LYT DJ46_4339 PF13492 GAF domain DJ46_4339 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_434 PF00535 Glycosyl transferase family 2 DJ46_4340 PF07690 Major Facilitator Superfamily DJ46_4341 PF02028 BCCT, betaine/carnitine/choline family transporter DJ46_4342 PF02898 Nitric oxide synthase, oxygenase domain DJ46_4343 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DJ46_4343 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DJ46_4345 PF02293 AmiS/UreI family transporter DJ46_4347 PF16363 GDP-mannose 4,6 dehydratase DJ46_4348 PF03006 Haemolysin-III related DJ46_435 PF13439 Glycosyltransferase Family 4 DJ46_435 PF00534 Glycosyl transferases group 1 DJ46_4350 PF03880 DbpA RNA binding domain DJ46_4350 PF00271 Helicase conserved C-terminal domain DJ46_4350 PF00270 DEAD/DEAH box helicase DJ46_4352 PF00478 IMP dehydrogenase / GMP reductase domain DJ46_4353 PF01432 Peptidase family M3 DJ46_4353 PF08439 Oligopeptidase F DJ46_4355 PF02590 Predicted SPOUT methyltransferase DJ46_4357 PF13180 PDZ domain DJ46_4358 PF00753 Metallo-beta-lactamase superfamily DJ46_4359 PF09648 YycH protein DJ46_4360 PF07435 YycH protein DJ46_4361 PF00512 His Kinase A (phospho-acceptor) domain DJ46_4361 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_4361 PF13426 PAS domain DJ46_4361 PF00672 HAMP domain DJ46_4362 PF00072 Response regulator receiver domain DJ46_4362 PF00486 Transcriptional regulatory protein, C terminal DJ46_4367 PF00709 Adenylosuccinate synthetase DJ46_4368 PF00772 DnaB-like helicase N terminal domain DJ46_4368 PF03796 DnaB-like helicase C terminal domain DJ46_4369 PF03948 Ribosomal protein L9, C-terminal domain DJ46_4369 PF01281 Ribosomal protein L9, N-terminal domain DJ46_4370 PF02272 DHHA1 domain DJ46_4370 PF01368 DHH family DJ46_4371 PF09991 Predicted membrane protein (DUF2232) DJ46_4372 PF01084 Ribosomal protein S18 DJ46_4373 PF00436 Single-strand binding protein family DJ46_4374 PF01250 Ribosomal protein S6 DJ46_4375 PF06071 Protein of unknown function (DUF933) DJ46_4375 PF01926 50S ribosome-binding GTPase DJ46_4376 PF06107 Bacterial protein of unknown function (DUF951) DJ46_4377 PF00924 Mechanosensitive ion channel DJ46_4378 PF06866 Protein of unknown function (DUF1256) DJ46_4379 PF17762 HTH domain found in ParB protein DJ46_4379 PF02195 ParB-like nuclease domain DJ46_438 PF18014 Acetyltransferase (GNAT) domain DJ46_438 PF13673 Acetyltransferase (GNAT) domain DJ46_4380 PF13614 AAA domain DJ46_4381 PF02195 ParB-like nuclease domain DJ46_4381 PF17762 HTH domain found in ParB protein DJ46_4382 PF02527 rRNA small subunit methyltransferase G DJ46_4383 PF01134 Glucose inhibited division protein A DJ46_4383 PF13932 GidA associated domain DJ46_4384 PF01926 50S ribosome-binding GTPase DJ46_4384 PF12631 MnmE helical domain DJ46_4384 PF10396 GTP-binding protein TrmE N-terminus DJ46_4385 PF01424 R3H domain DJ46_4385 PF14804 Jag N-terminus DJ46_4386 PF02096 60Kd inner membrane protein DJ46_4387 PF00825 Ribonuclease P DJ46_4388 PF00468 Ribosomal protein L34 DJ46_4389 PF11638 DnaA N-terminal domain DJ46_4389 PF08299 Bacterial dnaA protein helix-turn-helix DJ46_4389 PF00308 Bacterial dnaA protein DJ46_4390 PF02768 DNA polymerase III beta subunit, C-terminal domain DJ46_4390 PF00712 DNA polymerase III beta subunit, N-terminal domain DJ46_4390 PF02767 DNA polymerase III beta subunit, central domain DJ46_4392 PF02463 RecF/RecN/SMC N terminal domain DJ46_4393 PF00204 DNA gyrase B DJ46_4393 PF00986 DNA gyrase B subunit, carboxyl terminus DJ46_4393 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_4393 PF01751 Toprim domain DJ46_4394 PF03989 DNA gyrase C-terminal domain, beta-propeller DJ46_4394 PF00521 DNA gyrase/topoisomerase IV, subunit A DJ46_4399 PF14175 YaaC-like Protein DJ46_44 PF01152 Bacterial-like globin DJ46_4400 PF00478 IMP dehydrogenase / GMP reductase domain DJ46_4400 PF00571 CBS domain DJ46_4401 PF07943 Penicillin-binding protein 5, C-terminal domain DJ46_4401 PF00768 D-alanyl-D-alanine carboxypeptidase DJ46_4402 PF01680 SOR/SNZ family DJ46_4403 PF01174 SNO glutamine amidotransferase family DJ46_4404 PF02403 Seryl-tRNA synthetase N-terminal domain DJ46_4404 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DJ46_4407 PF01712 Deoxynucleoside kinase DJ46_4408 PF01712 Deoxynucleoside kinase DJ46_4409 PF00857 Isochorismatase family DJ46_4410 PF14437 MafB19-like deaminase DJ46_4411 PF12169 DNA polymerase III subunits gamma and tau domain III DJ46_4412 PF02575 YbaB/EbfC DNA-binding family DJ46_4413 PF02132 RecR protein DJ46_4413 PF13662 Toprim domain DJ46_4414 PF10704 Protein of unknown function (DUF2508) DJ46_4415 PF07441 SigmaK-factor processing regulatory protein BofA DJ46_442 PF13456 Reverse transcriptase-like DJ46_4421 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DJ46_4421 PF01276 Orn/Lys/Arg decarboxylase, major domain DJ46_4422 PF02223 Thymidylate kinase DJ46_4423 PF09115 DNA polymerase III, delta subunit, C terminal DJ46_4424 PF04468 PSP1 C-terminal conserved region DJ46_4425 PF06156 Initiation control protein YabA DJ46_4426 PF05175 Methyltransferase small domain DJ46_4427 PF01541 GIY-YIG catalytic domain DJ46_4428 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DJ46_4429 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DJ46_4429 PF18277 AbrB C-terminal domain DJ46_443 PF01263 Aldose 1-epimerase DJ46_4430 PF09334 tRNA synthetases class I (M) DJ46_4430 PF01588 Putative tRNA binding domain DJ46_4430 PF08264 Anticodon-binding domain of tRNA DJ46_4431 PF01026 TatD related DNase DJ46_4432 PF13662 Toprim domain DJ46_4432 PF13331 Domain of unknown function (DUF4093) DJ46_4433 PF00398 Ribosomal RNA adenine dimethylase DJ46_4434 PF05582 YabG peptidase U57 DJ46_4435 PF06257 Biofilm formation stimulator VEG DJ46_4436 PF00269 Small, acid-soluble spore proteins, alpha/beta type DJ46_4437 PF00288 GHMP kinases N terminal domain DJ46_4437 PF08544 GHMP kinases C terminal DJ46_4438 PF00156 Phosphoribosyl transferase domain DJ46_4438 PF09182 Bacterial purine repressor, N-terminal DJ46_4439 PF01042 Endoribonuclease L-PSP DJ46_4440 PF04026 SpoVG DJ46_4441 PF00483 Nucleotidyl transferase DJ46_4441 PF00132 Bacterial transferase hexapeptide (six repeats) DJ46_4442 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DJ46_4442 PF14572 Phosphoribosyl synthetase-associated domain DJ46_4443 PF01195 Peptidyl-tRNA hydrolase DJ46_4445 PF00271 Helicase conserved C-terminal domain DJ46_4445 PF00270 DEAD/DEAH box helicase DJ46_4445 PF03461 TRCF domain DJ46_4445 PF17757 UvrB interaction domain DJ46_4445 PF02559 CarD-like/TRCF domain DJ46_4446 PF15714 Stage V sporulation protein T C-terminal, transcription factor DJ46_4446 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DJ46_4447 PF01943 Polysaccharide biosynthesis protein DJ46_4447 PF14667 Polysaccharide biosynthesis C-terminal domain DJ46_4448 PF03819 MazG nucleotide pyrophosphohydrolase domain DJ46_4448 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DJ46_4449 PF01479 S4 domain DJ46_4450 PF07873 YabP family DJ46_4451 PF09578 Spore cortex protein YabQ (Spore_YabQ) DJ46_4453 PF00575 S1 RNA binding domain DJ46_4456 PF07228 Stage II sporulation protein E (SpoIIE) DJ46_4457 PF09179 TilS substrate binding domain DJ46_4457 PF01171 PP-loop family DJ46_4457 PF11734 TilS substrate C-terminal domain DJ46_4459 PF01434 Peptidase family M41 DJ46_4459 PF06480 FtsH Extracellular DJ46_4459 PF00004 ATPase family associated with various cellular activities (AAA) DJ46_4459 PF17862 AAA+ lid domain DJ46_4460 PF03309 Type III pantothenate kinase DJ46_4461 PF01430 Hsp33 protein DJ46_4462 PF00291 Pyridoxal-phosphate dependent enzyme DJ46_4463 PF04715 Anthranilate synthase component I, N terminal region DJ46_4463 PF00425 chorismate binding enzyme DJ46_4464 PF00117 Glutamine amidotransferase class-I DJ46_4465 PF01063 Amino-transferase class IV DJ46_4466 PF00809 Pterin binding enzyme DJ46_4467 PF02152 Dihydroneopterin aldolase DJ46_4468 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DJ46_4469 PF01381 Helix-turn-helix DJ46_4470 PF01207 Dihydrouridine synthase (Dus) DJ46_4471 PF01336 OB-fold nucleic acid binding domain DJ46_4471 PF00152 tRNA synthetases class II (D, K and N) DJ46_4475 PF17727 CtsR C-terminal dimerization domain DJ46_4475 PF05848 CtsR N-terminal HTH domain DJ46_4476 PF02151 UvrB/uvrC motif DJ46_4477 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain DJ46_4478 PF02861 Clp amino terminal domain, pathogenicity island component DJ46_4478 PF17871 AAA lid domain DJ46_4478 PF00004 ATPase family associated with various cellular activities (AAA) DJ46_4478 PF10431 C-terminal, D2-small domain, of ClpB protein DJ46_4478 PF07724 AAA domain (Cdc48 subfamily) DJ46_4479 PF18073 Rubredoxin metal binding domain DJ46_448 PF00313 'Cold-shock' DNA-binding domain DJ46_4480 PF02457 DisA bacterial checkpoint controller nucleotide-binding DJ46_4480 PF10635 DisA bacterial checkpoint controller linker region DJ46_4482 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DJ46_4483 PF02542 YgbB family DJ46_4484 PF00749 tRNA synthetases class I (E and Q), catalytic domain DJ46_4485 PF00132 Bacterial transferase hexapeptide (six repeats) DJ46_4485 PF06426 Serine acetyltransferase, N-terminal DJ46_4486 PF01406 tRNA synthetases class I (C) catalytic domain DJ46_4486 PF09190 DALR domain DJ46_4487 PF00636 Ribonuclease III domain DJ46_4488 PF08032 RNA 2'-O ribose methyltransferase substrate binding DJ46_4488 PF00588 SpoU rRNA Methylase family DJ46_4489 PF05991 YacP-like NYN domain DJ46_4490 PF04542 Sigma-70 region 2 DJ46_4490 PF08281 Sigma-70, region 4 DJ46_4491 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DJ46_4492 PF02357 Transcription termination factor nusG DJ46_4492 PF00467 KOW motif DJ46_4493 PF00298 Ribosomal protein L11, RNA binding domain DJ46_4493 PF03946 Ribosomal protein L11, N-terminal domain DJ46_4494 PF00687 Ribosomal protein L1p/L10e family DJ46_4495 PF00466 Ribosomal protein L10 DJ46_4496 PF00542 Ribosomal protein L7/L12 C-terminal domain DJ46_4496 PF16320 Ribosomal protein L7/L12 dimerisation domain DJ46_4497 PF05175 Methyltransferase small domain DJ46_4498 PF04560 RNA polymerase Rpb2, domain 7 DJ46_4498 PF00562 RNA polymerase Rpb2, domain 6 DJ46_4498 PF10385 RNA polymerase beta subunit external 1 domain DJ46_4498 PF04565 RNA polymerase Rpb2, domain 3 DJ46_4498 PF04561 RNA polymerase Rpb2, domain 2 DJ46_4498 PF04563 RNA polymerase beta subunit DJ46_4499 PF00623 RNA polymerase Rpb1, domain 2 DJ46_4499 PF04997 RNA polymerase Rpb1, domain 1 DJ46_4499 PF04998 RNA polymerase Rpb1, domain 5 DJ46_4499 PF04983 RNA polymerase Rpb1, domain 3 DJ46_4499 PF05000 RNA polymerase Rpb1, domain 4 DJ46_45 PF01928 CYTH domain DJ46_450 PF01810 LysE type translocator DJ46_4500 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family DJ46_4501 PF00164 Ribosomal protein S12/S23 DJ46_4502 PF00177 Ribosomal protein S7p/S5e DJ46_4503 PF00009 Elongation factor Tu GTP binding domain DJ46_4503 PF03144 Elongation factor Tu domain 2 DJ46_4503 PF03764 Elongation factor G, domain IV DJ46_4503 PF14492 Elongation Factor G, domain II DJ46_4503 PF00679 Elongation factor G C-terminus DJ46_4504 PF03143 Elongation factor Tu C-terminal domain DJ46_4504 PF03144 Elongation factor Tu domain 2 DJ46_4504 PF00009 Elongation factor Tu GTP binding domain DJ46_4505 PF00338 Ribosomal protein S10p/S20e DJ46_4506 PF00297 Ribosomal protein L3 DJ46_4507 PF00573 Ribosomal protein L4/L1 family DJ46_4508 PF00276 Ribosomal protein L23 DJ46_4509 PF03947 Ribosomal Proteins L2, C-terminal domain DJ46_4509 PF00181 Ribosomal Proteins L2, RNA binding domain DJ46_4510 PF00203 Ribosomal protein S19 DJ46_4511 PF00237 Ribosomal protein L22p/L17e DJ46_4512 PF07650 KH domain DJ46_4512 PF00189 Ribosomal protein S3, C-terminal domain DJ46_4513 PF00252 Ribosomal protein L16p/L10e DJ46_4514 PF00831 Ribosomal L29 protein DJ46_4515 PF00366 Ribosomal protein S17 DJ46_4516 PF00238 Ribosomal protein L14p/L23e DJ46_4517 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DJ46_4517 PF00467 KOW motif DJ46_4518 PF00281 Ribosomal protein L5 DJ46_4518 PF00673 ribosomal L5P family C-terminus DJ46_4519 PF00253 Ribosomal protein S14p/S29e DJ46_4520 PF00410 Ribosomal protein S8 DJ46_4521 PF00347 Ribosomal protein L6 DJ46_4522 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DJ46_4523 PF03719 Ribosomal protein S5, C-terminal domain DJ46_4523 PF00333 Ribosomal protein S5, N-terminal domain DJ46_4524 PF00327 Ribosomal protein L30p/L7e DJ46_4525 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DJ46_4526 PF00344 SecY translocase DJ46_4527 PF05191 Adenylate kinase, active site lid DJ46_4528 PF00557 Metallopeptidase family M24 DJ46_4529 PF01176 Translation initiation factor 1A / IF-1 DJ46_453 PF04341 Protein of unknown function, DUF485 DJ46_4530 PF00444 Ribosomal protein L36 DJ46_4531 PF00416 Ribosomal protein S13/S18 DJ46_4532 PF00411 Ribosomal protein S11 DJ46_4533 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DJ46_4533 PF01000 RNA polymerase Rpb3/RpoA insert domain DJ46_4533 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DJ46_4534 PF01196 Ribosomal protein L17 DJ46_4535 PF00005 ABC transporter DJ46_4536 PF00005 ABC transporter DJ46_4537 PF02361 Cobalt transport protein DJ46_4538 PF01416 tRNA pseudouridine synthase DJ46_4539 PF00572 Ribosomal protein L13 DJ46_454 PF00474 Sodium:solute symporter family DJ46_4540 PF00380 Ribosomal protein S9/S16 DJ46_4542 PF01520 N-acetylmuramoyl-L-alanine amidase DJ46_4543 PF10609 NUBPL iron-transfer P-loop NTPase DJ46_4544 PF17898 Spore germination GerD central core domain DJ46_4545 PF14089 KinB-signalling pathway activation in sporulation DJ46_4546 PF01522 Polysaccharide deacetylase DJ46_455 PF00202 Aminotransferase class-III DJ46_4561 PF02595 Glycerate kinase family DJ46_4562 PF02595 Glycerate kinase family DJ46_4563 PF00491 Arginase family DJ46_4564 PF02457 DisA bacterial checkpoint controller nucleotide-binding DJ46_4565 PF07949 YbbR-like protein DJ46_4566 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DJ46_4566 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DJ46_4566 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DJ46_4566 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DJ46_4567 PF01380 SIS domain DJ46_4568 PF00561 alpha/beta hydrolase fold DJ46_4569 PF07729 FCD domain DJ46_4569 PF00392 Bacterial regulatory proteins, gntR family DJ46_457 PF00999 Sodium/hydrogen exchanger family DJ46_4570 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DJ46_4570 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DJ46_4571 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DJ46_4571 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DJ46_4572 PF02447 GntP family permease DJ46_4573 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DJ46_4573 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DJ46_4574 PF00326 Prolyl oligopeptidase family DJ46_4574 PF07676 WD40-like Beta Propeller Repeat DJ46_458 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DJ46_458 PF17770 Ribonuclease J C-terminal domain DJ46_458 PF00753 Metallo-beta-lactamase superfamily DJ46_4583 PF00528 Binding-protein-dependent transport system inner membrane component DJ46_4584 PF09383 NIL domain DJ46_4584 PF00005 ABC transporter DJ46_4585 PF03180 NLPA lipoprotein DJ46_4588 PF01565 FAD binding domain DJ46_4589 PF07690 Major Facilitator Superfamily DJ46_459 PF13411 MerR HTH family regulatory protein DJ46_459 PF06445 GyrI-like small molecule binding domain DJ46_4591 PF07690 Major Facilitator Superfamily DJ46_4594 PF00528 Binding-protein-dependent transport system inner membrane component DJ46_4595 PF00528 Binding-protein-dependent transport system inner membrane component DJ46_4595 PF12911 N-terminal TM domain of oligopeptide transport permease C DJ46_4596 PF00005 ABC transporter DJ46_4596 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DJ46_4597 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DJ46_4597 PF00005 ABC transporter DJ46_4598 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ46_4600 PF12833 Helix-turn-helix domain DJ46_4603 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ46_4604 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ46_4605 PF00248 Aldo/keto reductase family DJ46_4606 PF03807 NADP oxidoreductase coenzyme F420-dependent DJ46_4606 PF14748 Pyrroline-5-carboxylate reductase dimerisation DJ46_4607 PF04973 Nicotinamide mononucleotide transporter DJ46_4608 PF06800 Sugar transport protein DJ46_4609 PF00528 Binding-protein-dependent transport system inner membrane component DJ46_461 PF04239 Protein of unknown function (DUF421) DJ46_4612 PF12728 Helix-turn-helix domain DJ46_4612 PF12727 PBP superfamily domain DJ46_4615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ46_4615 PF03466 LysR substrate binding domain DJ46_4616 PF00892 EamA-like transporter family DJ46_4617 PF14142 YrzO-like protein DJ46_4619 PF01553 Acyltransferase DJ46_462 PF02698 DUF218 domain DJ46_4621 PF00356 Bacterial regulatory proteins, lacI family DJ46_4621 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DJ46_4623 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DJ46_4623 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DJ46_4626 PF01026 TatD related DNase DJ46_4627 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) DJ46_4631 PF00005 ABC transporter DJ46_4631 PF16326 ABC transporter C-terminal domain DJ46_4631 PF12848 ABC transporter DJ46_4634 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ46_4635 PF00528 Binding-protein-dependent transport system inner membrane component DJ46_4637 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DJ46_4637 PF00005 ABC transporter DJ46_4638 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DJ46_4638 PF00005 ABC transporter DJ46_464 PF00881 Nitroreductase family DJ46_4646 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ46_4647 PF01557 Fumarylacetoacetate (FAA) hydrolase family DJ46_4649 PF07690 Major Facilitator Superfamily DJ46_4650 PF07478 D-ala D-ala ligase C-terminus DJ46_4650 PF01820 D-ala D-ala ligase N-terminus DJ46_4651 PF07478 D-ala D-ala ligase C-terminus DJ46_4651 PF01820 D-ala D-ala ligase N-terminus DJ46_4652 PF02875 Mur ligase family, glutamate ligase domain DJ46_4652 PF08245 Mur ligase middle domain DJ46_4652 PF01225 Mur ligase family, catalytic domain DJ46_4653 PF00270 DEAD/DEAH box helicase DJ46_4653 PF00271 Helicase conserved C-terminal domain DJ46_4654 PF01694 Rhomboid family DJ46_4655 PF03851 UV-endonuclease UvdE DJ46_4656 PF01648 4'-phosphopantetheinyl transferase superfamily DJ46_4658 PF01168 Alanine racemase, N-terminal domain DJ46_4658 PF00842 Alanine racemase, C-terminal domain DJ46_4659 PF01402 Ribbon-helix-helix protein, copG family DJ46_4660 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system DJ46_4661 PF17674 HHH domain DJ46_4661 PF00575 S1 RNA binding domain DJ46_4661 PF09371 Tex-like protein N-terminal domain DJ46_4661 PF16921 Tex protein YqgF-like domain DJ46_4662 PF10263 SprT-like family DJ46_4662 PF17283 SprT-like zinc ribbon domain DJ46_4682 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DJ46_4683 PF00814 Glycoprotease family DJ46_4684 PF00583 Acetyltransferase (GNAT) family DJ46_4685 PF00814 Glycoprotease family DJ46_4686 PF16326 ABC transporter C-terminal domain DJ46_4686 PF00005 ABC transporter DJ46_4686 PF12848 ABC transporter DJ46_4687 PF06971 Putative DNA-binding protein N-terminus DJ46_4687 PF02629 CoA binding domain DJ46_4689 PF02517 CPBP intramembrane metalloprotease DJ46_4690 PF00166 Chaperonin 10 Kd subunit DJ46_4691 PF00118 TCP-1/cpn60 chaperonin family DJ46_4692 PF02540 NAD synthase DJ46_4692 PF00117 Glutamine amidotransferase class-I DJ46_4692 PF00958 GMP synthase C terminal domain DJ46_4693 PF00860 Permease family DJ46_4694 PF00486 Transcriptional regulatory protein, C terminal DJ46_4694 PF00072 Response regulator receiver domain DJ46_4695 PF00989 PAS fold DJ46_4695 PF00512 His Kinase A (phospho-acceptor) domain DJ46_4695 PF16736 Single Cache-like DJ46_4695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_47 PF04607 Region found in RelA / SpoT proteins DJ46_4700 PF14307 Glycosyltransferase WbsX DJ46_4700 PF05045 Rhamnan synthesis protein F DJ46_4703 PF08241 Methyltransferase domain DJ46_4709 PF00535 Glycosyl transferase family 2 DJ46_4715 PF02673 Bacitracin resistance protein BacA DJ46_4717 PF00005 ABC transporter DJ46_4718 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_4718 PF00512 His Kinase A (phospho-acceptor) domain DJ46_4719 PF00072 Response regulator receiver domain DJ46_4719 PF00486 Transcriptional regulatory protein, C terminal DJ46_4724 PF00731 AIR carboxylase DJ46_4725 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DJ46_4725 PF02222 ATP-grasp domain DJ46_4726 PF00206 Lyase DJ46_4726 PF10397 Adenylosuccinate lyase C-terminus DJ46_4727 PF01259 SAICAR synthetase DJ46_4728 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase DJ46_473 PF17209 Hfq protein DJ46_4730 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DJ46_4730 PF00586 AIR synthase related protein, N-terminal domain DJ46_4730 PF02769 AIR synthase related protein, C-terminal domain DJ46_4731 PF00156 Phosphoribosyl transferase domain DJ46_4732 PF02769 AIR synthase related protein, C-terminal domain DJ46_4732 PF00586 AIR synthase related protein, N-terminal domain DJ46_4734 PF00551 Formyl transferase DJ46_4735 PF02142 MGS-like domain DJ46_4735 PF01808 AICARFT/IMPCHase bienzyme DJ46_4736 PF02844 Phosphoribosylglycinamide synthetase, N domain DJ46_4736 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DJ46_4736 PF02843 Phosphoribosylglycinamide synthetase, C domain DJ46_4740 PF01884 PcrB family DJ46_4741 PF00580 UvrD/REP helicase N-terminal domain DJ46_4741 PF13361 UvrD-like helicase C-terminal domain DJ46_4742 PF01653 NAD-dependent DNA ligase adenylation domain DJ46_4742 PF00533 BRCA1 C Terminus (BRCT) domain DJ46_4742 PF03120 NAD-dependent DNA ligase OB-fold domain DJ46_4742 PF12826 Helix-hairpin-helix motif DJ46_4742 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DJ46_4743 PF07537 CamS sex pheromone cAM373 precursor DJ46_4744 PF01925 Sulfite exporter TauE/SafE DJ46_4745 PF00171 Aldehyde dehydrogenase family DJ46_4747 PF00857 Isochorismatase family DJ46_4748 PF00005 ABC transporter DJ46_4748 PF09383 NIL domain DJ46_4749 PF00528 Binding-protein-dependent transport system inner membrane component DJ46_475 PF01618 MotA/TolQ/ExbB proton channel family DJ46_4750 PF03180 NLPA lipoprotein DJ46_4753 PF02374 Anion-transporting ATPase DJ46_4753 PF17886 HSP20-like domain found in ArsA DJ46_4754 PF02374 Anion-transporting ATPase DJ46_4754 PF17886 HSP20-like domain found in ArsA DJ46_4755 PF01047 MarR family DJ46_4756 PF05360 yiaA/B two helix domain DJ46_4757 PF02686 Glu-tRNAGln amidotransferase C subunit DJ46_4758 PF01425 Amidase DJ46_4759 PF02637 GatB domain DJ46_4759 PF02934 GatB/GatE catalytic domain DJ46_476 PF00691 OmpA family DJ46_476 PF13677 Membrane MotB of proton-channel complex MotA/MotB DJ46_4760 PF00781 Diacylglycerol kinase catalytic domain DJ46_4761 PF13419 Haloacid dehalogenase-like hydrolase DJ46_4762 PF00202 Aminotransferase class-III DJ46_4763 PF00158 Sigma-54 interaction domain DJ46_4764 PF00171 Aldehyde dehydrogenase family DJ46_4765 PF00893 Small Multidrug Resistance protein DJ46_4766 PF02073 Thermophilic metalloprotease (M29) DJ46_4769 PF07662 Na+ dependent nucleoside transporter C-terminus DJ46_4769 PF07670 Nucleoside recognition DJ46_4769 PF01773 Na+ dependent nucleoside transporter N-terminus DJ46_477 PF00072 Response regulator receiver domain DJ46_4770 PF05958 tRNA (Uracil-5-)-methyltransferase DJ46_4770 PF01938 TRAM domain DJ46_4770 PF02475 Met-10+ like-protein DJ46_4771 PF01207 Dihydrouridine synthase (Dus) DJ46_4773 PF07308 Protein of unknown function (DUF1456) DJ46_4776 PF13378 Enolase C-terminal domain-like DJ46_4776 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DJ46_4779 PF01546 Peptidase family M20/M25/M40 DJ46_4779 PF07687 Peptidase dimerisation domain DJ46_478 PF01584 CheW-like domain DJ46_478 PF02895 Signal transducing histidine kinase, homodimeric domain DJ46_478 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_478 PF01627 Hpt domain DJ46_478 PF07194 P2 response regulator binding domain DJ46_4781 PF13192 Thioredoxin domain DJ46_4781 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ46_4782 PF00578 AhpC/TSA family DJ46_4783 PF01636 Phosphotransferase enzyme family DJ46_4785 PF00596 Class II Aldolase and Adducin N-terminal domain DJ46_4786 PF01032 FecCD transport family DJ46_4787 PF01032 FecCD transport family DJ46_4788 PF01497 Periplasmic binding protein DJ46_4789 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ46_479 PF01584 CheW-like domain DJ46_479 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_479 PF01627 Hpt domain DJ46_479 PF02895 Signal transducing histidine kinase, homodimeric domain DJ46_479 PF07194 P2 response regulator binding domain DJ46_4791 PF12728 Helix-turn-helix domain DJ46_4797 PF00512 His Kinase A (phospho-acceptor) domain DJ46_4797 PF00989 PAS fold DJ46_4797 PF13188 PAS domain DJ46_4797 PF13426 PAS domain DJ46_4797 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_48 PF01513 ATP-NAD kinase DJ46_480 PF04509 CheC-like family DJ46_480 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DJ46_4801 PF10127 RNA repair pathway DNA polymerase beta family DJ46_4802 PF07690 Major Facilitator Superfamily DJ46_4803 PF00355 Rieske [2Fe-2S] domain DJ46_4803 PF01266 FAD dependent oxidoreductase DJ46_4805 PF00528 Binding-protein-dependent transport system inner membrane component DJ46_4806 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJ46_4807 PF00005 ABC transporter DJ46_4808 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ46_4808 PF00672 HAMP domain DJ46_4808 PF12729 Four helix bundle sensory module for signal transduction DJ46_4809 PF12729 Four helix bundle sensory module for signal transduction DJ46_4809 PF00672 HAMP domain DJ46_4809 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ46_4810 PF00128 Alpha amylase, catalytic domain DJ46_4810 PF16657 Maltogenic Amylase, C-terminal domain DJ46_4811 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DJ46_4811 PF02378 Phosphotransferase system, EIIC DJ46_4811 PF00367 phosphotransferase system, EIIB DJ46_4812 PF03372 Endonuclease/Exonuclease/phosphatase family DJ46_4813 PF01061 ABC-2 type transporter DJ46_4814 PF01131 DNA topoisomerase DJ46_4814 PF01751 Toprim domain DJ46_4815 PF02110 Hydroxyethylthiazole kinase family DJ46_4816 PF02581 Thiamine monophosphate synthase DJ46_4817 PF03605 Anaerobic c4-dicarboxylate membrane transporter DJ46_4818 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ46_4818 PF00672 HAMP domain DJ46_4819 PF01910 Thiamine-binding protein DJ46_4820 PF00528 Binding-protein-dependent transport system inner membrane component DJ46_4822 PF00005 ABC transporter DJ46_4823 PF00005 ABC transporter DJ46_4823 PF12848 ABC transporter DJ46_4824 PF00704 Glycosyl hydrolases family 18 DJ46_4824 PF00041 Fibronectin type III domain DJ46_4828 PF00440 Bacterial regulatory proteins, tetR family DJ46_4828 PF08360 QacR-like protein, C-terminal region DJ46_483 PF03705 CheR methyltransferase, all-alpha domain DJ46_483 PF01739 CheR methyltransferase, SAM binding domain DJ46_4832 PF11700 Vacuole effluxer Atg22 like DJ46_4835 PF09180 Prolyl-tRNA synthetase, C-terminal DJ46_4835 PF03129 Anticodon binding domain DJ46_4835 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DJ46_4837 PF00480 ROK family DJ46_4838 PF02342 TerD domain DJ46_4839 PF02342 TerD domain DJ46_4840 PF02342 TerD domain DJ46_4841 PF03741 Integral membrane protein TerC family DJ46_4842 PF14266 Putative component of 'biosynthetic module' DJ46_4843 PF05816 Toxic anion resistance protein (TelA) DJ46_4844 PF00690 Cation transporter/ATPase, N-terminus DJ46_4844 PF00689 Cation transporting ATPase, C-terminus DJ46_4845 PF06569 Protein of unknown function (DUF1128) DJ46_4846 PF01451 Low molecular weight phosphotyrosine protein phosphatase DJ46_4848 PF03631 Virulence factor BrkB DJ46_4850 PF00892 EamA-like transporter family DJ46_4852 PF10502 Signal peptidase, peptidase S26 DJ46_4853 PF10502 Signal peptidase, peptidase S26 DJ46_4856 PF09335 SNARE associated Golgi protein DJ46_4859 PF16242 Pyridoxamine 5'-phosphate oxidase like DJ46_4860 PF01699 Sodium/calcium exchanger protein DJ46_4861 PF14167 YfkD-like protein DJ46_4862 PF08756 YfkB-like domain DJ46_4862 PF04055 Radical SAM superfamily DJ46_4864 PF05683 Fumarase C-terminus DJ46_4864 PF05681 Fumarate hydratase (Fumerase) DJ46_4865 PF01522 Polysaccharide deacetylase DJ46_4867 PF00730 HhH-GPD superfamily base excision DNA repair protein DJ46_4868 PF01938 TRAM domain DJ46_4868 PF05958 tRNA (Uracil-5-)-methyltransferase DJ46_4869 PF14659 Phage integrase, N-terminal SAM-like domain DJ46_4869 PF00589 Phage integrase family DJ46_4873 PF01381 Helix-turn-helix DJ46_4880 PF07319 Primosomal protein DnaI N-terminus DJ46_4880 PF01695 IstB-like ATP binding protein DJ46_489 PF00700 Bacterial flagellin C-terminal helical region DJ46_489 PF00669 Bacterial flagellin N-terminal helical region DJ46_49 PF00849 RNA pseudouridylate synthase DJ46_4925 PF01183 Glycosyl hydrolases family 25 DJ46_4927 PF01416 tRNA pseudouridine synthase DJ46_4929 PF02954 Bacterial regulatory protein, Fis family DJ46_4929 PF13426 PAS domain DJ46_4929 PF00158 Sigma-54 interaction domain DJ46_4931 PF00324 Amino acid permease DJ46_4932 PF07687 Peptidase dimerisation domain DJ46_4932 PF01546 Peptidase family M20/M25/M40 DJ46_4937 PF04960 Glutaminase DJ46_4938 PF00367 phosphotransferase system, EIIB DJ46_4938 PF02378 Phosphotransferase system, EIIC DJ46_4939 PF00144 Beta-lactamase DJ46_494 PF00460 Flagella basal body rod protein DJ46_4942 PF00535 Glycosyl transferase family 2 DJ46_4943 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DJ46_4943 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DJ46_4943 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DJ46_4944 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DJ46_4944 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DJ46_4944 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DJ46_4945 PF00551 Formyl transferase DJ46_4945 PF02911 Formyl transferase, C-terminal domain DJ46_4945 PF01370 NAD dependent epimerase/dehydratase family DJ46_4946 PF00535 Glycosyl transferase family 2 DJ46_4947 PF02901 Pyruvate formate lyase-like DJ46_4947 PF01228 Glycine radical DJ46_4948 PF04055 Radical SAM superfamily DJ46_4949 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase DJ46_4949 PF04101 Glycosyltransferase family 28 C-terminal domain DJ46_495 PF00460 Flagella basal body rod protein DJ46_495 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DJ46_4953 PF01979 Amidohydrolase family DJ46_4954 PF01370 NAD dependent epimerase/dehydratase family DJ46_4954 PF08338 Domain of unknown function (DUF1731) DJ46_4955 PF02631 RecX family DJ46_4958 PF08176 Small acid-soluble spore protein K family DJ46_4959 PF14043 WVELL protein DJ46_496 PF02049 Flagellar hook-basal body complex protein FliE DJ46_4960 PF04307 LexA-binding, inner membrane-associated putative hydrolase DJ46_4961 PF00730 HhH-GPD superfamily base excision DNA repair protein DJ46_4961 PF14815 NUDIX domain DJ46_4963 PF04259 Small, acid-soluble spore protein, gamma-type DJ46_4964 PF14182 YgaB-like protein DJ46_4965 PF04167 Protein of unknown function (DUF402) DJ46_4966 PF00664 ABC transporter transmembrane region DJ46_4966 PF00005 ABC transporter DJ46_4967 PF06081 Aromatic acid exporter family member 1 DJ46_4968 PF00310 Glutamine amidotransferases class-II DJ46_4968 PF01493 GXGXG motif DJ46_4968 PF01645 Conserved region in glutamate synthase DJ46_4968 PF04898 Glutamate synthase central domain DJ46_4969 PF00202 Aminotransferase class-III DJ46_497 PF08345 Flagellar M-ring protein C-terminal DJ46_497 PF01514 Secretory protein of YscJ/FliF family DJ46_4970 PF00005 ABC transporter DJ46_4973 PF07885 Ion channel DJ46_4974 PF00578 AhpC/TSA family DJ46_4975 PF01475 Ferric uptake regulator family DJ46_4976 PF11023 Zinc-ribbon containing domain DJ46_499 PF14841 FliG middle domain DJ46_499 PF01706 FliG C-terminal domain DJ46_499 PF14842 FliG N-terminal domain DJ46_4998 PF01709 Transcriptional regulator DJ46_4999 PF13344 Haloacid dehalogenase-like hydrolase DJ46_4999 PF00293 NUDIX domain DJ46_5 PF00128 Alpha amylase, catalytic domain DJ46_5000 PF00912 Transglycosylase DJ46_5000 PF00905 Penicillin binding protein transpeptidase domain DJ46_5001 PF13462 Thioredoxin DJ46_5003 PF08331 Domain of unknown function (DUF1730) DJ46_5004 PF12671 Putative amidase domain DJ46_5005 PF00588 SpoU rRNA Methylase family DJ46_5006 PF00563 EAL domain DJ46_5006 PF00990 Diguanylate cyclase, GGDEF domain DJ46_5006 PF03707 Bacterial signalling protein N terminal repeat DJ46_5008 PF06798 PrkA serine protein kinase C-terminal domain DJ46_5008 PF08298 PrkA AAA domain DJ46_5009 PF04285 Protein of unknown function (DUF444) DJ46_501 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DJ46_501 PF02874 ATP synthase alpha/beta family, beta-barrel domain DJ46_501 PF18269 T3SS EscN ATPase C-terminal domain DJ46_5012 PF02028 BCCT, betaine/carnitine/choline family transporter DJ46_5013 PF08453 Peptidase family M9 N-terminal DJ46_5013 PF18496 Collagenase G catalytic helper subdomain DJ46_5013 PF01752 Collagenase DJ46_5015 PF15975 Flotillin DJ46_5015 PF01145 SPFH domain / Band 7 family DJ46_5016 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ46_5016 PF00672 HAMP domain DJ46_5016 PF02743 Cache domain DJ46_5017 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DJ46_5017 PF17203 Single cache domain 3 DJ46_5017 PF00989 PAS fold DJ46_5017 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_5018 PF00072 Response regulator receiver domain DJ46_5018 PF08279 HTH domain DJ46_5018 PF12431 Transcriptional regulator DJ46_5019 PF03600 Citrate transporter DJ46_5023 PF04309 Glycerol-3-phosphate responsive antiterminator DJ46_5024 PF17912 MalK OB fold domain DJ46_5024 PF00005 ABC transporter DJ46_5025 PF00528 Binding-protein-dependent transport system inner membrane component DJ46_5026 PF00528 Binding-protein-dependent transport system inner membrane component DJ46_5027 PF13416 Bacterial extracellular solute-binding protein DJ46_5028 PF00149 Calcineurin-like phosphoesterase DJ46_5029 PF00486 Transcriptional regulatory protein, C terminal DJ46_5029 PF00072 Response regulator receiver domain DJ46_5030 PF00512 His Kinase A (phospho-acceptor) domain DJ46_5030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_5032 PF13529 Peptidase_C39 like family DJ46_5033 PF02743 Cache domain DJ46_5033 PF00672 HAMP domain DJ46_5033 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ46_5034 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DJ46_5034 PF17203 Single cache domain 3 DJ46_5034 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_5034 PF00989 PAS fold DJ46_5035 PF00072 Response regulator receiver domain DJ46_5036 PF03390 2-hydroxycarboxylate transporter family DJ46_5037 PF00390 Malic enzyme, N-terminal domain DJ46_5037 PF03949 Malic enzyme, NAD binding domain DJ46_5039 PF00892 EamA-like transporter family DJ46_5040 PF00392 Bacterial regulatory proteins, gntR family DJ46_5040 PF00155 Aminotransferase class I and II DJ46_5042 PF00989 PAS fold DJ46_5042 PF18698 Histidine kinase sensor domain DJ46_5042 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_5042 PF00512 His Kinase A (phospho-acceptor) domain DJ46_5042 PF00672 HAMP domain DJ46_5043 PF00072 Response regulator receiver domain DJ46_5043 PF00486 Transcriptional regulatory protein, C terminal DJ46_5045 PF00583 Acetyltransferase (GNAT) family DJ46_5045 PF13508 Acetyltransferase (GNAT) domain DJ46_5046 PF02634 FdhD/NarQ family DJ46_5047 PF00384 Molybdopterin oxidoreductase DJ46_5047 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DJ46_5047 PF01568 Molydopterin dinucleotide binding domain DJ46_5047 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DJ46_5047 PF00037 4Fe-4S binding domain DJ46_5051 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DJ46_5051 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DJ46_5052 PF13520 Amino acid permease DJ46_5053 PF01022 Bacterial regulatory protein, arsR family DJ46_5054 PF00403 Heavy-metal-associated domain DJ46_5055 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DJ46_5055 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain DJ46_5055 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DJ46_5058 PF02868 Thermolysin metallopeptidase, alpha-helical domain DJ46_5058 PF01447 Thermolysin metallopeptidase, catalytic domain DJ46_5058 PF03413 Peptidase propeptide and YPEB domain DJ46_5058 PF07504 Fungalysin/Thermolysin Propeptide Motif DJ46_506 PF07559 Flagellar basal body protein FlaE DJ46_506 PF00460 Flagella basal body rod protein DJ46_506 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DJ46_5062 PF04294 VanW like protein DJ46_5063 PF03816 Cell envelope-related transcriptional attenuator domain DJ46_5064 PF01773 Na+ dependent nucleoside transporter N-terminus DJ46_5064 PF07662 Na+ dependent nucleoside transporter C-terminus DJ46_5065 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ46_5066 PF01595 Cyclin M transmembrane N-terminal domain DJ46_5066 PF03471 Transporter associated domain DJ46_5066 PF00571 CBS domain DJ46_5067 PF10415 Fumarase C C-terminus DJ46_5067 PF00206 Lyase DJ46_5068 PF02652 L-lactate permease DJ46_5069 PF01022 Bacterial regulatory protein, arsR family DJ46_5070 PF08141 Small acid-soluble spore protein H family DJ46_5071 PF00854 POT family DJ46_5072 PF01497 Periplasmic binding protein DJ46_5073 PF01032 FecCD transport family DJ46_5074 PF01032 FecCD transport family DJ46_5075 PF00005 ABC transporter DJ46_5076 PF08241 Methyltransferase domain DJ46_5077 PF00155 Aminotransferase class I and II DJ46_5078 PF01370 NAD dependent epimerase/dehydratase family DJ46_5079 PF00293 NUDIX domain DJ46_5079 PF13344 Haloacid dehalogenase-like hydrolase DJ46_5080 PF00092 von Willebrand factor type A domain DJ46_5081 PF07728 AAA domain (dynein-related subfamily) DJ46_5082 PF13396 Phospholipase_D-nuclease N-terminal DJ46_5082 PF13091 PLD-like domain DJ46_5085 PF03707 Bacterial signalling protein N terminal repeat DJ46_5085 PF00990 Diguanylate cyclase, GGDEF domain DJ46_5085 PF00563 EAL domain DJ46_5086 PF13520 Amino acid permease DJ46_5087 PF00392 Bacterial regulatory proteins, gntR family DJ46_5087 PF07702 UTRA domain DJ46_5088 PF00367 phosphotransferase system, EIIB DJ46_5088 PF02378 Phosphotransferase system, EIIC DJ46_5089 PF16657 Maltogenic Amylase, C-terminal domain DJ46_5089 PF00128 Alpha amylase, catalytic domain DJ46_5093 PF03323 Bacillus/Clostridium GerA spore germination protein DJ46_5095 PF01636 Phosphotransferase enzyme family DJ46_5096 PF01235 Sodium:alanine symporter family DJ46_5097 PF00005 ABC transporter DJ46_5098 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJ46_5099 PF00528 Binding-protein-dependent transport system inner membrane component DJ46_51 PF00149 Calcineurin-like phosphoesterase DJ46_510 PF00072 Response regulator receiver domain DJ46_510 PF01584 CheW-like domain DJ46_5100 PF00528 Binding-protein-dependent transport system inner membrane component DJ46_5101 PF00324 Amino acid permease DJ46_5106 PF13280 WYL domain DJ46_5106 PF08279 HTH domain DJ46_5107 PF01872 RibD C-terminal domain DJ46_5108 PF00989 PAS fold DJ46_5108 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_5108 PF18698 Histidine kinase sensor domain DJ46_5108 PF00512 His Kinase A (phospho-acceptor) domain DJ46_5108 PF00672 HAMP domain DJ46_5109 PF00486 Transcriptional regulatory protein, C terminal DJ46_5109 PF00072 Response regulator receiver domain DJ46_511 PF12181 DNA binding domain of the motility gene repressor (MogR) DJ46_5111 PF01740 STAS domain DJ46_5111 PF00916 Sulfate permease family DJ46_5112 PF00582 Universal stress protein family DJ46_5114 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ46_5115 PF00528 Binding-protein-dependent transport system inner membrane component DJ46_5116 PF00528 Binding-protein-dependent transport system inner membrane component DJ46_5117 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DJ46_5117 PF00005 ABC transporter DJ46_5118 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DJ46_5118 PF00005 ABC transporter DJ46_5119 PF07690 Major Facilitator Superfamily DJ46_512 PF00535 Glycosyl transferase family 2 DJ46_5120 PF01047 MarR family DJ46_5121 PF07690 Major Facilitator Superfamily DJ46_5122 PF07690 Major Facilitator Superfamily DJ46_5123 PF00356 Bacterial regulatory proteins, lacI family DJ46_5124 PF00294 pfkB family carbohydrate kinase DJ46_5125 PF05025 RbsD / FucU transport protein family DJ46_5126 PF00005 ABC transporter DJ46_5127 PF02653 Branched-chain amino acid transport system / permease component DJ46_5128 PF13407 Periplasmic binding protein domain DJ46_5129 PF00923 Transaldolase/Fructose-6-phosphate aldolase DJ46_5130 PF05547 Immune inhibitor A peptidase M6 DJ46_5133 PF08240 Alcohol dehydrogenase GroES-like domain DJ46_5133 PF00107 Zinc-binding dehydrogenase DJ46_5135 PF00882 Zinc dependent phospholipase C DJ46_5136 PF03372 Endonuclease/Exonuclease/phosphatase family DJ46_5141 PF02673 Bacitracin resistance protein BacA DJ46_5142 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ46_5142 PF00672 HAMP domain DJ46_5142 PF02743 Cache domain DJ46_5143 PF01476 LysM domain DJ46_5143 PF06725 3D domain DJ46_5144 PF01381 Helix-turn-helix DJ46_5146 PF04203 Sortase domain DJ46_5147 PF00854 POT family DJ46_5148 PF05525 Branched-chain amino acid transport protein DJ46_5151 PF00324 Amino acid permease DJ46_5152 PF00860 Permease family DJ46_5157 PF02254 TrkA-N domain DJ46_5157 PF02080 TrkA-C domain DJ46_5157 PF00999 Sodium/hydrogen exchanger family DJ46_5159 PF00510 Cytochrome c oxidase subunit III DJ46_5160 PF00115 Cytochrome C and Quinol oxidase polypeptide I DJ46_5161 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DJ46_5162 PF13529 Peptidase_C39 like family DJ46_5163 PF07687 Peptidase dimerisation domain DJ46_5163 PF01546 Peptidase family M20/M25/M40 DJ46_5164 PF11755 Protein of unknown function (DUF3311) DJ46_5165 PF00474 Sodium:solute symporter family DJ46_5166 PF03323 Bacillus/Clostridium GerA spore germination protein DJ46_5167 PF03845 Spore germination protein DJ46_5168 PF05504 Spore germination B3/ GerAC like, C-terminal DJ46_5169 PF07664 Ferrous iron transport protein B C terminus DJ46_5169 PF02421 Ferrous iron transport protein B DJ46_5169 PF17910 FeoB cytosolic helical domain DJ46_5169 PF07670 Nucleoside recognition DJ46_5170 PF07670 Nucleoside recognition DJ46_5170 PF17910 FeoB cytosolic helical domain DJ46_5170 PF07664 Ferrous iron transport protein B C terminus DJ46_5170 PF02421 Ferrous iron transport protein B DJ46_5171 PF02421 Ferrous iron transport protein B DJ46_5171 PF07664 Ferrous iron transport protein B C terminus DJ46_5171 PF07670 Nucleoside recognition DJ46_5171 PF17910 FeoB cytosolic helical domain DJ46_5171 PF04023 FeoA domain DJ46_5172 PF12849 PBP superfamily domain DJ46_5173 PF00528 Binding-protein-dependent transport system inner membrane component DJ46_5174 PF00528 Binding-protein-dependent transport system inner membrane component DJ46_5176 PF00873 AcrB/AcrD/AcrF family DJ46_518 PF13181 Tetratricopeptide repeat DJ46_518 PF00535 Glycosyl transferase family 2 DJ46_52 PF01098 Cell cycle protein DJ46_5201 PF00571 CBS domain DJ46_5204 PF00246 Zinc carboxypeptidase DJ46_5204 PF08239 Bacterial SH3 domain DJ46_5205 PF03070 TENA/THI-4/PQQC family DJ46_5206 PF00005 ABC transporter DJ46_5207 PF00528 Binding-protein-dependent transport system inner membrane component DJ46_5208 PF09084 NMT1/THI5 like DJ46_5209 PF02581 Thiamine monophosphate synthase DJ46_5210 PF01266 FAD dependent oxidoreductase DJ46_5211 PF02597 ThiS family DJ46_5212 PF05690 Thiazole biosynthesis protein ThiG DJ46_5213 PF00899 ThiF family DJ46_5214 PF08543 Phosphomethylpyrimidine kinase DJ46_5218 PF03814 Potassium-transporting ATPase A subunit DJ46_5220 PF02669 K+-transporting ATPase, c chain DJ46_5221 PF02702 Osmosensitive K+ channel His kinase sensor domain DJ46_5222 PF07690 Major Facilitator Superfamily DJ46_5223 PF01047 MarR family DJ46_5226 PF00860 Permease family DJ46_523 PF00669 Bacterial flagellin N-terminal helical region DJ46_523 PF00700 Bacterial flagellin C-terminal helical region DJ46_5231 PF00294 pfkB family carbohydrate kinase DJ46_5232 PF08244 Glycosyl hydrolases family 32 C terminal DJ46_5232 PF00251 Glycosyl hydrolases family 32 N-terminal domain DJ46_5233 PF02378 Phosphotransferase system, EIIC DJ46_5233 PF00367 phosphotransferase system, EIIB DJ46_5234 PF00356 Bacterial regulatory proteins, lacI family DJ46_5234 PF13407 Periplasmic binding protein domain DJ46_5236 PF00085 Thioredoxin DJ46_5237 PF02600 Disulfide bond formation protein DsbB DJ46_5238 PF14148 YhdB-like protein DJ46_524 PF01464 Transglycosylase SLT domain DJ46_5240 PF03845 Spore germination protein DJ46_5242 PF03323 Bacillus/Clostridium GerA spore germination protein DJ46_5245 PF00881 Nitroreductase family DJ46_5246 PF04293 SpoVR like protein DJ46_525 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DJ46_525 PF02154 Flagellar motor switch protein FliM DJ46_5251 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DJ46_5251 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ46_5252 PF02583 Metal-sensitive transcriptional repressor DJ46_5253 PF01206 Sulfurtransferase TusA DJ46_5253 PF00581 Rhodanese-like domain DJ46_5254 PF00753 Metallo-beta-lactamase superfamily DJ46_5254 PF00581 Rhodanese-like domain DJ46_5255 PF01206 Sulfurtransferase TusA DJ46_5257 PF00581 Rhodanese-like domain DJ46_5259 PF13686 DsrE/DsrF/DrsH-like family DJ46_5260 PF01925 Sulfite exporter TauE/SafE DJ46_5262 PF03816 Cell envelope-related transcriptional attenuator domain DJ46_5263 PF08240 Alcohol dehydrogenase GroES-like domain DJ46_5263 PF00107 Zinc-binding dehydrogenase DJ46_5264 PF02690 Na+/Pi-cotransporter DJ46_5265 PF07690 Major Facilitator Superfamily DJ46_5267 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DJ46_5267 PF00874 PRD domain DJ46_5267 PF05043 Mga helix-turn-helix domain DJ46_5267 PF08279 HTH domain DJ46_5268 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DJ46_5269 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DJ46_527 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DJ46_527 PF04509 CheC-like family DJ46_5270 PF02378 Phosphotransferase system, EIIC DJ46_5273 PF06725 3D domain DJ46_5273 PF01476 LysM domain DJ46_5274 PF12704 MacB-like periplasmic core domain DJ46_5274 PF02687 FtsX-like permease family DJ46_5275 PF00005 ABC transporter DJ46_5277 PF09529 Integral membrane protein (intg_mem_TP0381) DJ46_5280 PF05525 Branched-chain amino acid transport protein DJ46_5281 PF05067 Manganese containing catalase DJ46_5282 PF12652 CotJB protein DJ46_5283 PF11007 Spore coat associated protein JA (CotJA) DJ46_5286 PF02735 Ku70/Ku80 beta-barrel domain DJ46_5288 PF09335 SNARE associated Golgi protein DJ46_529 PF00813 FliP family DJ46_5294 PF13520 Amino acid permease DJ46_5295 PF00999 Sodium/hydrogen exchanger family DJ46_5297 PF01380 SIS domain DJ46_5297 PF01418 Helix-turn-helix domain, rpiR family DJ46_5298 PF01380 SIS domain DJ46_5299 PF00367 phosphotransferase system, EIIB DJ46_5299 PF02378 Phosphotransferase system, EIIC DJ46_53 PF01098 Cell cycle protein DJ46_530 PF01313 Bacterial export proteins, family 3 DJ46_5301 PF07681 DoxX DJ46_5304 PF00892 EamA-like transporter family DJ46_5305 PF01037 Lrp/AsnC ligand binding domain DJ46_5307 PF00893 Small Multidrug Resistance protein DJ46_5308 PF00893 Small Multidrug Resistance protein DJ46_5309 PF17934 Tetracyclin repressor-like, C-terminal domain DJ46_5309 PF00440 Bacterial regulatory proteins, tetR family DJ46_5310 PF07690 Major Facilitator Superfamily DJ46_5311 PF01638 HxlR-like helix-turn-helix DJ46_5313 PF02525 Flavodoxin-like fold DJ46_5314 PF12793 Sugar transport-related sRNA regulator N-term DJ46_5314 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ46_5315 PF07690 Major Facilitator Superfamily DJ46_5317 PF01965 DJ-1/PfpI family DJ46_5318 PF18011 C-terminal domain found in long catalases DJ46_5318 PF00199 Catalase DJ46_5318 PF06628 Catalase-related immune-responsive DJ46_532 PF01312 FlhB HrpN YscU SpaS Family DJ46_5320 PF13520 Amino acid permease DJ46_5321 PF01177 Asp/Glu/Hydantoin racemase DJ46_5323 PF00171 Aldehyde dehydrogenase family DJ46_5324 PF00005 ABC transporter DJ46_5324 PF00664 ABC transporter transmembrane region DJ46_5325 PF00005 ABC transporter DJ46_5325 PF00664 ABC transporter transmembrane region DJ46_5326 PF00005 ABC transporter DJ46_5326 PF00664 ABC transporter transmembrane region DJ46_5327 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJ46_5328 PF00528 Binding-protein-dependent transport system inner membrane component DJ46_5329 PF00005 ABC transporter DJ46_533 PF00771 FHIPEP family DJ46_5330 PF00269 Small, acid-soluble spore proteins, alpha/beta type DJ46_5332 PF14398 YheC/D like ATP-grasp DJ46_5334 PF04286 Protein of unknown function (DUF445) DJ46_5335 PF06133 Control of competence regulator ComK, YlbF/YmcA DJ46_5338 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DJ46_5338 PF00205 Thiamine pyrophosphate enzyme, central domain DJ46_5338 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DJ46_5339 PF03306 Alpha-acetolactate decarboxylase DJ46_534 PF00448 SRP54-type protein, GTPase domain DJ46_5341 PF02245 Methylpurine-DNA glycosylase (MPG) DJ46_5344 PF01471 Putative peptidoglycan binding domain DJ46_5344 PF01476 LysM domain DJ46_5344 PF01510 N-acetylmuramoyl-L-alanine amidase DJ46_5346 PF04055 Radical SAM superfamily DJ46_5347 PF13193 AMP-binding enzyme C-terminal domain DJ46_5347 PF00501 AMP-binding enzyme DJ46_5349 PF00916 Sulfate permease family DJ46_5349 PF01740 STAS domain DJ46_535 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DJ46_535 PF00460 Flagella basal body rod protein DJ46_5353 PF07516 SecA Wing and Scaffold domain DJ46_5353 PF01043 SecA preprotein cross-linking domain DJ46_5353 PF07517 SecA DEAD-like domain DJ46_5354 PF14667 Polysaccharide biosynthesis C-terminal domain DJ46_5354 PF01943 Polysaccharide biosynthesis protein DJ46_5356 PF02368 Bacterial Ig-like domain (group 2) DJ46_5356 PF00395 S-layer homology domain DJ46_5356 PF13205 Bacterial Ig-like domain DJ46_5357 PF00395 S-layer homology domain DJ46_5359 PF03062 MBOAT, membrane-bound O-acyltransferase family DJ46_536 PF02272 DHHA1 domain DJ46_536 PF01411 tRNA synthetases class II (A) DJ46_536 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DJ46_5360 PF03062 MBOAT, membrane-bound O-acyltransferase family DJ46_5363 PF00378 Enoyl-CoA hydratase/isomerase DJ46_5366 PF05343 M42 glutamyl aminopeptidase DJ46_5367 PF01520 N-acetylmuramoyl-L-alanine amidase DJ46_5367 PF00395 S-layer homology domain DJ46_5369 PF11121 Protein of unknown function (DUF2639) DJ46_5370 PF05544 Proline racemase DJ46_5371 PF02423 Ornithine cyclodeaminase/mu-crystallin family DJ46_5372 PF18593 CdiI immunity protein DJ46_5376 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ46_5377 PF00528 Binding-protein-dependent transport system inner membrane component DJ46_5378 PF00528 Binding-protein-dependent transport system inner membrane component DJ46_5378 PF12911 N-terminal TM domain of oligopeptide transport permease C DJ46_5379 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DJ46_5379 PF00005 ABC transporter DJ46_5380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DJ46_5380 PF00005 ABC transporter DJ46_5381 PF00005 ABC transporter DJ46_5381 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DJ46_5387 PF00083 Sugar (and other) transporter DJ46_5388 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_5388 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DJ46_5389 PF00072 Response regulator receiver domain DJ46_5389 PF08279 HTH domain DJ46_5389 PF12431 Transcriptional regulator DJ46_5390 PF03401 Tripartite tricarboxylate transporter family receptor DJ46_5391 PF02342 TerD domain DJ46_5395 PF06445 GyrI-like small molecule binding domain DJ46_5395 PF13411 MerR HTH family regulatory protein DJ46_5398 PF03796 DnaB-like helicase C terminal domain DJ46_5398 PF00772 DnaB-like helicase N terminal domain DJ46_54 PF00535 Glycosyl transferase family 2 DJ46_5403 PF01925 Sulfite exporter TauE/SafE DJ46_5406 PF07690 Major Facilitator Superfamily DJ46_541 PF00440 Bacterial regulatory proteins, tetR family DJ46_541 PF17932 Tetracyclin repressor-like, C-terminal domain DJ46_5416 PF00550 Phosphopantetheine attachment site DJ46_5416 PF07993 Male sterility protein DJ46_5417 PF00440 Bacterial regulatory proteins, tetR family DJ46_5417 PF18665 Tetracyclin repressor-like, C-terminal domain DJ46_542 PF17329 Family of unknown function (DUF5367) DJ46_5421 PF01066 CDP-alcohol phosphatidyltransferase DJ46_5425 PF02733 Dak1 domain DJ46_5427 PF02733 Dak1 domain DJ46_5428 PF02525 Flavodoxin-like fold DJ46_5429 PF02082 Transcriptional regulator DJ46_5435 PF00672 HAMP domain DJ46_5435 PF01966 HD domain DJ46_5440 PF00395 S-layer homology domain DJ46_5444 PF11181 Heat induced stress protein YflT DJ46_5445 PF05532 CsbD-like DJ46_5448 PF01740 STAS domain DJ46_5449 PF13581 Histidine kinase-like ATPase domain DJ46_545 PF03992 Antibiotic biosynthesis monooxygenase DJ46_5450 PF04539 Sigma-70 region 3 DJ46_5450 PF04545 Sigma-70, region 4 DJ46_5450 PF04542 Sigma-70 region 2 DJ46_5452 PF13426 PAS domain DJ46_5452 PF07228 Stage II sporulation protein E (SpoIIE) DJ46_5453 PF03705 CheR methyltransferase, all-alpha domain DJ46_5453 PF01739 CheR methyltransferase, SAM binding domain DJ46_5454 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJ46_5454 PF00512 His Kinase A (phospho-acceptor) domain DJ46_5454 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_5454 PF00072 Response regulator receiver domain DJ46_5454 PF01627 Hpt domain DJ46_5459 PF01906 Putative heavy-metal-binding DJ46_546 PF08141 Small acid-soluble spore protein H family DJ46_5461 PF00107 Zinc-binding dehydrogenase DJ46_5461 PF08240 Alcohol dehydrogenase GroES-like domain DJ46_5462 PF11121 Protein of unknown function (DUF2639) DJ46_5465 PF00149 Calcineurin-like phosphoesterase DJ46_5466 PF13514 AAA domain DJ46_5467 PF01385 Probable transposase DJ46_5467 PF12323 Helix-turn-helix domain DJ46_5467 PF07282 Putative transposase DNA-binding domain DJ46_5469 PF01336 OB-fold nucleic acid binding domain DJ46_5469 PF01966 HD domain DJ46_5470 PF00440 Bacterial regulatory proteins, tetR family DJ46_5471 PF07690 Major Facilitator Superfamily DJ46_5472 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ46_5473 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ46_5474 PF18801 response regulator aspartate phosphatase H, N terminal DJ46_5476 PF08386 TAP-like protein DJ46_5476 PF00561 alpha/beta hydrolase fold DJ46_5480 PF04309 Glycerol-3-phosphate responsive antiterminator DJ46_5481 PF00230 Major intrinsic protein DJ46_5482 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DJ46_5482 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DJ46_5483 PF01266 FAD dependent oxidoreductase DJ46_5483 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DJ46_5486 PF08281 Sigma-70, region 4 DJ46_5486 PF04542 Sigma-70 region 2 DJ46_5491 PF07690 Major Facilitator Superfamily DJ46_5492 PF07690 Major Facilitator Superfamily DJ46_5494 PF13538 UvrD-like helicase C-terminal domain DJ46_5498 PF01047 MarR family DJ46_5499 PF12732 YtxH-like protein DJ46_55 PF08241 Methyltransferase domain DJ46_5500 PF01230 HIT domain DJ46_5501 PF00005 ABC transporter DJ46_5502 PF05975 Bacterial ABC transporter protein EcsB DJ46_5503 PF12787 EcsC protein family DJ46_5505 PF00440 Bacterial regulatory proteins, tetR family DJ46_5505 PF17934 Tetracyclin repressor-like, C-terminal domain DJ46_5507 PF03703 Bacterial PH domain DJ46_5509 PF03703 Bacterial PH domain DJ46_551 PF00005 ABC transporter DJ46_551 PF08402 TOBE domain DJ46_5519 PF03703 Bacterial PH domain DJ46_5520 PF03703 Bacterial PH domain DJ46_5521 PF03992 Antibiotic biosynthesis monooxygenase DJ46_5522 PF00912 Transglycosylase DJ46_5522 PF00905 Penicillin binding protein transpeptidase domain DJ46_5523 PF01208 Uroporphyrinogen decarboxylase (URO-D) DJ46_553 PF00528 Binding-protein-dependent transport system inner membrane component DJ46_5530 PF03965 Penicillinase repressor DJ46_5532 PF17932 Tetracyclin repressor-like, C-terminal domain DJ46_5532 PF00440 Bacterial regulatory proteins, tetR family DJ46_5538 PF00356 Bacterial regulatory proteins, lacI family DJ46_5539 PF14149 YhfH-like protein DJ46_554 PF12706 Beta-lactamase superfamily domain DJ46_554 PF00753 Metallo-beta-lactamase superfamily DJ46_5540 PF12706 Beta-lactamase superfamily domain DJ46_5541 PF10437 Bacterial lipoate protein ligase C-terminus DJ46_5541 PF03099 Biotin/lipoate A/B protein ligase family DJ46_5543 PF13193 AMP-binding enzyme C-terminal domain DJ46_5543 PF00501 AMP-binding enzyme DJ46_5545 PF01520 N-acetylmuramoyl-L-alanine amidase DJ46_5545 PF00395 S-layer homology domain DJ46_5546 PF05593 RHS Repeat DJ46_5549 PF05593 RHS Repeat DJ46_5554 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DJ46_5556 PF00149 Calcineurin-like phosphoesterase DJ46_5557 PF01966 HD domain DJ46_5559 PF08281 Sigma-70, region 4 DJ46_5559 PF04542 Sigma-70 region 2 DJ46_556 PF10787 Uncharacterised protein from bacillus cereus group DJ46_5560 PF06445 GyrI-like small molecule binding domain DJ46_5560 PF12833 Helix-turn-helix domain DJ46_5563 PF00512 His Kinase A (phospho-acceptor) domain DJ46_5563 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_5564 PF00486 Transcriptional regulatory protein, C terminal DJ46_5564 PF00072 Response regulator receiver domain DJ46_5569 PF16491 CAAX prenyl protease N-terminal, five membrane helices DJ46_5569 PF01435 Peptidase family M48 DJ46_5570 PF02743 Cache domain DJ46_5570 PF00672 HAMP domain DJ46_5570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ46_5571 PF00892 EamA-like transporter family DJ46_5572 PF00395 S-layer homology domain DJ46_5572 PF03424 Carbohydrate binding domain (family 17/28) DJ46_5572 PF00150 Cellulase (glycosyl hydrolase family 5) DJ46_5574 PF00395 S-layer homology domain DJ46_5575 PF01274 Malate synthase DJ46_5576 PF00463 Isocitrate lyase family DJ46_5578 PF00313 'Cold-shock' DNA-binding domain DJ46_5581 PF06338 ComK protein DJ46_5582 PF09335 SNARE associated Golgi protein DJ46_5583 PF10502 Signal peptidase, peptidase S26 DJ46_5584 PF12705 PD-(D/E)XK nuclease superfamily DJ46_5584 PF13361 UvrD-like helicase C-terminal domain DJ46_5585 PF13361 UvrD-like helicase C-terminal domain DJ46_5585 PF00580 UvrD/REP helicase N-terminal domain DJ46_5585 PF12705 PD-(D/E)XK nuclease superfamily DJ46_5587 PF10676 Spore germination protein gerPA/gerPF DJ46_5588 PF10970 Spore germination protein GerPE DJ46_559 PF00768 D-alanyl-D-alanine carboxypeptidase DJ46_559 PF07943 Penicillin-binding protein 5, C-terminal domain DJ46_5590 PF10737 Spore germination protein GerPC DJ46_5591 PF10803 Spore germination GerPB DJ46_5592 PF10676 Spore germination protein gerPA/gerPF DJ46_5593 PF01557 Fumarylacetoacetate (FAA) hydrolase family DJ46_5595 PF00202 Aminotransferase class-III DJ46_5596 PF07457 Protein of unknown function (DUF1516) DJ46_56 PF05711 Macrocin-O-methyltransferase (TylF) DJ46_5607 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DJ46_561 PF00300 Histidine phosphatase superfamily (branch 1) DJ46_5615 PF08378 Nuclease-related domain DJ46_5621 PF01131 DNA topoisomerase DJ46_5621 PF01751 Toprim domain DJ46_5621 PF13342 C-terminal repeat of topoisomerase DJ46_5623 PF00565 Staphylococcal nuclease homologue DJ46_5626 PF02600 Disulfide bond formation protein DsbB DJ46_5627 PF01022 Bacterial regulatory protein, arsR family DJ46_5628 PF17209 Hfq protein DJ46_5630 PF18801 response regulator aspartate phosphatase H, N terminal DJ46_5635 PF00589 Phage integrase family DJ46_5637 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment DJ46_5638 PF01609 Transposase DDE domain DJ46_5639 PF13333 Integrase core domain DJ46_5639 PF00665 Integrase core domain DJ46_5639 PF13276 HTH-like domain DJ46_5641 PF13333 Integrase core domain DJ46_5641 PF00665 Integrase core domain DJ46_5641 PF13276 HTH-like domain DJ46_5644 PF13276 HTH-like domain DJ46_5644 PF00665 Integrase core domain DJ46_5644 PF13333 Integrase core domain DJ46_5646 PF14436 Bacterial EndoU nuclease DJ46_5646 PF04740 LXG domain of WXG superfamily DJ46_5653 PF02899 Phage integrase, N-terminal SAM-like domain DJ46_5653 PF00589 Phage integrase family DJ46_5655 PF18277 AbrB C-terminal domain DJ46_5655 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DJ46_5660 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain DJ46_5660 PF09156 Anthrax toxin lethal factor, middle domain DJ46_5664 PF01022 Bacterial regulatory protein, arsR family DJ46_5665 PF03495 Clostridial binary toxin B/anthrax toxin PA Ca-binding domain DJ46_5665 PF17475 Clostridial binary toxin B/anthrax toxin PA domain 2 DJ46_5665 PF17476 Clostridial binary toxin B/anthrax toxin PA domain 3 DJ46_5665 PF07691 PA14 domain DJ46_5667 PF05504 Spore germination B3/ GerAC like, C-terminal DJ46_5668 PF03323 Bacillus/Clostridium GerA spore germination protein DJ46_5669 PF03845 Spore germination protein DJ46_5670 PF02796 Helix-turn-helix domain of resolvase DJ46_5670 PF00239 Resolvase, N terminal domain DJ46_5671 PF01526 Tn3 transposase DDE domain DJ46_5671 PF13700 Domain of unknown function (DUF4158) DJ46_5675 PF09385 Histidine kinase N terminal DJ46_5676 PF05043 Mga helix-turn-helix domain DJ46_5676 PF00874 PRD domain DJ46_5676 PF08279 HTH domain DJ46_5677 PF02660 Glycerol-3-phosphate acyltransferase DJ46_568 PF13537 Glutamine amidotransferase domain DJ46_568 PF00733 Asparagine synthase DJ46_5682 PF00156 Phosphoribosyl transferase domain DJ46_5683 PF00156 Phosphoribosyl transferase domain DJ46_5684 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain DJ46_5684 PF03497 Anthrax toxin LF subunit DJ46_5692 PF13276 HTH-like domain DJ46_5692 PF00665 Integrase core domain DJ46_5692 PF13333 Integrase core domain DJ46_5693 PF13333 Integrase core domain DJ46_5693 PF00665 Integrase core domain DJ46_5693 PF13276 HTH-like domain DJ46_5697 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DJ46_5697 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DJ46_5697 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DJ46_5698 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DJ46_5698 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DJ46_5698 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DJ46_5699 PF00483 Nucleotidyl transferase DJ46_5700 PF00535 Glycosyl transferase family 2 DJ46_5703 PF01569 PAP2 superfamily DJ46_5704 PF00395 S-layer homology domain DJ46_5710 PF04235 Protein of unknown function (DUF418) DJ46_5713 PF10087 Uncharacterized protein conserved in bacteria (DUF2325) DJ46_572 PF01545 Cation efflux family DJ46_572 PF16916 Dimerisation domain of Zinc Transporter DJ46_574 PF07729 FCD domain DJ46_574 PF00392 Bacterial regulatory proteins, gntR family DJ46_5741 PF00437 Type II/IV secretion system protein DJ46_575 PF00892 EamA-like transporter family DJ46_576 PF07683 Cobalamin synthesis protein cobW C-terminal domain DJ46_576 PF02492 CobW/HypB/UreG, nucleotide-binding domain DJ46_5761 PF01580 FtsK/SpoIIIE family DJ46_5761 PF09397 Ftsk gamma domain DJ46_5761 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DJ46_5761 PF17854 FtsK alpha domain DJ46_5766 PF01609 Transposase DDE domain DJ46_5767 PF01609 Transposase DDE domain DJ46_5768 PF01609 Transposase DDE domain DJ46_5769 PF01609 Transposase DDE domain DJ46_577 PF03773 Predicted permease DJ46_5774 PF01609 Transposase DDE domain DJ46_5775 PF01609 Transposase DDE domain DJ46_579 PF00535 Glycosyl transferase family 2 DJ46_58 PF13181 Tetratricopeptide repeat DJ46_58 PF00535 Glycosyl transferase family 2 DJ46_580 PF03553 Na+/H+ antiporter family DJ46_581 PF00206 Lyase DJ46_581 PF10415 Fumarase C C-terminus DJ46_5810 PF00877 NlpC/P60 family DJ46_5812 PF17632 Family of unknown function (DUF5513) DJ46_5818 PF17633 Family of unknown function (DUF5514) DJ46_5819 PF17630 Family of unknown function (DUF5511) DJ46_5824 PF13154 Protein of unknown function (DUF3991) DJ46_5825 PF01751 Toprim domain DJ46_5825 PF01131 DNA topoisomerase DJ46_5826 PF01131 DNA topoisomerase DJ46_5826 PF01751 Toprim domain DJ46_5832 PF17443 Uncharacterized protein pXO2-72 DJ46_5836 PF11798 IMS family HHH motif DJ46_5836 PF00817 impB/mucB/samB family DJ46_5836 PF11799 impB/mucB/samB family C-terminal domain DJ46_5837 PF13152 Protein of unknown function (DUF3967) DJ46_5837 PF13411 MerR HTH family regulatory protein DJ46_5839 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ46_5843 PF00874 PRD domain DJ46_5843 PF05043 Mga helix-turn-helix domain DJ46_5843 PF08280 M protein trans-acting positive regulator (MGA) HTH domain DJ46_5845 PF01810 LysE type translocator DJ46_5848 PF08279 HTH domain DJ46_5848 PF05043 Mga helix-turn-helix domain DJ46_5848 PF00874 PRD domain DJ46_5849 PF00874 PRD domain DJ46_5849 PF05043 Mga helix-turn-helix domain DJ46_5849 PF08279 HTH domain DJ46_585 PF01554 MatE DJ46_5850 PF09385 Histidine kinase N terminal DJ46_5853 PF10502 Signal peptidase, peptidase S26 DJ46_5855 PF01609 Transposase DDE domain DJ46_5856 PF01022 Bacterial regulatory protein, arsR family DJ46_5858 PF08245 Mur ligase middle domain DJ46_5859 PF14102 Capsule biosynthesis CapC DJ46_586 PF01554 MatE DJ46_5860 PF09587 Bacterial capsule synthesis protein PGA_cap DJ46_5864 PF05043 Mga helix-turn-helix domain DJ46_5864 PF08280 M protein trans-acting positive regulator (MGA) HTH domain DJ46_5866 PF01569 PAP2 superfamily DJ46_5868 PF01569 PAP2 superfamily DJ46_5869 PF01609 Transposase DDE domain DJ46_587 PF03575 Peptidase family S51 DJ46_5870 PF01609 Transposase DDE domain DJ46_5871 PF00440 Bacterial regulatory proteins, tetR family DJ46_5872 PF04463 Protein of unknown function (DUF523) DJ46_5873 PF02517 CPBP intramembrane metalloprotease DJ46_5875 PF01906 Putative heavy-metal-binding DJ46_5879 PF13276 HTH-like domain DJ46_5879 PF00665 Integrase core domain DJ46_5879 PF13333 Integrase core domain DJ46_5881 PF01520 N-acetylmuramoyl-L-alanine amidase DJ46_5881 PF00395 S-layer homology domain DJ46_5882 PF00395 S-layer homology domain DJ46_5882 PF01520 N-acetylmuramoyl-L-alanine amidase DJ46_5885 PF13614 AAA domain DJ46_5886 PF08708 Primase C terminal 1 (PriCT-1) DJ46_5891 PF17362 Family of unknown function DJ46_5894 PF17631 Family of unknown function (DUF5512) DJ46_5904 PF00437 Type II/IV secretion system protein DJ46_591 PF02683 Cytochrome C biogenesis protein transmembrane region DJ46_5910 PF04956 TrbC/VIRB2 family DJ46_5913 PF12696 TraM recognition site of TraD and TraG DJ46_592 PF00578 AhpC/TSA family DJ46_597 PF00291 Pyridoxal-phosphate dependent enzyme DJ46_598 PF04286 Protein of unknown function (DUF445) DJ46_603 PF00196 Bacterial regulatory proteins, luxR family DJ46_603 PF00072 Response regulator receiver domain DJ46_604 PF07730 Histidine kinase DJ46_604 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_604 PF13492 GAF domain DJ46_604 PF13185 GAF domain DJ46_605 PF00005 ABC transporter DJ46_608 PF13091 PLD-like domain DJ46_609 PF00696 Amino acid kinase family DJ46_610 PF00375 Sodium:dicarboxylate symporter family DJ46_611 PF10415 Fumarase C C-terminus DJ46_611 PF00206 Lyase DJ46_612 PF00390 Malic enzyme, N-terminal domain DJ46_612 PF03949 Malic enzyme, NAD binding domain DJ46_613 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_614 PF00072 Response regulator receiver domain DJ46_614 PF08664 YcbB domain DJ46_615 PF00271 Helicase conserved C-terminal domain DJ46_615 PF00176 SNF2 family N-terminal domain DJ46_615 PF04434 SWIM zinc finger DJ46_617 PF03590 Aspartate-ammonia ligase DJ46_62 PF00483 Nucleotidyl transferase DJ46_621 PF00696 Amino acid kinase family DJ46_621 PF13840 ACT domain DJ46_624 PF13761 Domain of unknown function (DUF4166) DJ46_625 PF14158 YndJ-like protein DJ46_626 PF00293 NUDIX domain DJ46_627 PF02368 Bacterial Ig-like domain (group 2) DJ46_627 PF13205 Bacterial Ig-like domain DJ46_627 PF00395 S-layer homology domain DJ46_629 PF07690 Major Facilitator Superfamily DJ46_63 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DJ46_632 PF02554 Carbon starvation protein CstA DJ46_633 PF03976 Polyphosphate kinase 2 (PPK2) DJ46_634 PF07690 Major Facilitator Superfamily DJ46_635 PF07690 Major Facilitator Superfamily DJ46_636 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DJ46_636 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DJ46_638 PF16360 GTP-binding GTPase Middle Region DJ46_638 PF13167 GTP-binding GTPase N-terminal DJ46_638 PF01926 50S ribosome-binding GTPase DJ46_64 PF16363 GDP-mannose 4,6 dehydratase DJ46_640 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ46_641 PF07690 Major Facilitator Superfamily DJ46_642 PF00291 Pyridoxal-phosphate dependent enzyme DJ46_645 PF14667 Polysaccharide biosynthesis C-terminal domain DJ46_645 PF01943 Polysaccharide biosynthesis protein DJ46_646 PF00209 Sodium:neurotransmitter symporter family DJ46_647 PF00457 Glycosyl hydrolases family 11 DJ46_647 PF01522 Polysaccharide deacetylase DJ46_647 PF03422 Carbohydrate binding module (family 6) DJ46_649 PF04239 Protein of unknown function (DUF421) DJ46_65 PF04321 RmlD substrate binding domain DJ46_652 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DJ46_652 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DJ46_656 PF01625 Peptide methionine sulfoxide reductase DJ46_658 PF01063 Amino-transferase class IV DJ46_659 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DJ46_659 PF00205 Thiamine pyrophosphate enzyme, central domain DJ46_659 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DJ46_660 PF10369 Small subunit of acetolactate synthase DJ46_661 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DJ46_661 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DJ46_662 PF00920 Dehydratase family DJ46_663 PF00585 C-terminal regulatory domain of Threonine dehydratase DJ46_663 PF00291 Pyridoxal-phosphate dependent enzyme DJ46_665 PF09587 Bacterial capsule synthesis protein PGA_cap DJ46_668 PF07690 Major Facilitator Superfamily DJ46_669 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DJ46_671 PF00072 Response regulator receiver domain DJ46_671 PF04397 LytTr DNA-binding domain DJ46_672 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DJ46_672 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DJ46_676 PF01979 Amidohydrolase family DJ46_677 PF12146 Serine aminopeptidase, S33 DJ46_677 PF13026 Protein of unknown function (DUF3887) DJ46_678 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ46_683 PF13186 Iron-sulfur cluster-binding domain DJ46_683 PF04055 Radical SAM superfamily DJ46_684 PF13302 Acetyltransferase (GNAT) domain DJ46_685 PF00072 Response regulator receiver domain DJ46_685 PF00486 Transcriptional regulatory protein, C terminal DJ46_687 PF00512 His Kinase A (phospho-acceptor) domain DJ46_687 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_689 PF01566 Natural resistance-associated macrophage protein DJ46_69 PF07098 Protein of unknown function (DUF1360) DJ46_692 PF02558 Ketopantoate reductase PanE/ApbA DJ46_692 PF08546 Ketopantoate reductase PanE/ApbA C terminal DJ46_694 PF13520 Amino acid permease DJ46_695 PF13520 Amino acid permease DJ46_697 PF05791 Bacillus haemolytic enterotoxin (HBL) DJ46_698 PF05791 Bacillus haemolytic enterotoxin (HBL) DJ46_7 PF04461 Protein of unknown function (DUF520) DJ46_700 PF04198 Putative sugar-binding domain DJ46_701 PF01791 DeoC/LacD family aldolase DJ46_702 PF01773 Na+ dependent nucleoside transporter N-terminus DJ46_702 PF07662 Na+ dependent nucleoside transporter C-terminus DJ46_703 PF02885 Glycosyl transferase family, helical bundle domain DJ46_703 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DJ46_703 PF00591 Glycosyl transferase family, a/b domain DJ46_704 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DJ46_705 PF05979 Bacterial protein of unknown function (DUF896) DJ46_709 PF05195 Aminopeptidase P, N-terminal domain DJ46_709 PF00557 Metallopeptidase family M24 DJ46_710 PF07731 Multicopper oxidase DJ46_710 PF07732 Multicopper oxidase DJ46_711 PF00394 Multicopper oxidase DJ46_711 PF07731 Multicopper oxidase DJ46_711 PF07732 Multicopper oxidase DJ46_712 PF01551 Peptidase family M23 DJ46_717 PF02525 Flavodoxin-like fold DJ46_718 PF05525 Branched-chain amino acid transport protein DJ46_719 PF05525 Branched-chain amino acid transport protein DJ46_72 PF13361 UvrD-like helicase C-terminal domain DJ46_72 PF00580 UvrD/REP helicase N-terminal domain DJ46_721 PF05425 Copper resistance protein D DJ46_721 PF04234 CopC domain DJ46_721 PF13115 YtkA-like DJ46_722 PF07987 Domain of unkown function (DUF1775) DJ46_724 PF00892 EamA-like transporter family DJ46_725 PF03466 LysR substrate binding domain DJ46_725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ46_726 PF02082 Transcriptional regulator DJ46_727 PF01323 DSBA-like thioredoxin domain DJ46_728 PF00881 Nitroreductase family DJ46_73 PF13673 Acetyltransferase (GNAT) domain DJ46_730 PF01425 Amidase DJ46_731 PF01594 AI-2E family transporter DJ46_732 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DJ46_732 PF00056 lactate/malate dehydrogenase, NAD binding domain DJ46_733 PF01593 Flavin containing amine oxidoreductase DJ46_734 PF07683 Cobalamin synthesis protein cobW C-terminal domain DJ46_734 PF02492 CobW/HypB/UreG, nucleotide-binding domain DJ46_737 PF00501 AMP-binding enzyme DJ46_737 PF13193 AMP-binding enzyme C-terminal domain DJ46_738 PF01575 MaoC like domain DJ46_739 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DJ46_739 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DJ46_741 PF12399 Branched-chain amino acid ATP-binding cassette transporter DJ46_741 PF00005 ABC transporter DJ46_742 PF00005 ABC transporter DJ46_743 PF02653 Branched-chain amino acid transport system / permease component DJ46_745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ46_745 PF03466 LysR substrate binding domain DJ46_747 PF14552 Tautomerase enzyme DJ46_749 PF01047 MarR family DJ46_75 PF00756 Putative esterase DJ46_751 PF01654 Cytochrome bd terminal oxidase subunit I DJ46_752 PF02322 Cytochrome bd terminal oxidase subunit II DJ46_753 PF00005 ABC transporter DJ46_753 PF00664 ABC transporter transmembrane region DJ46_754 PF00005 ABC transporter DJ46_754 PF00664 ABC transporter transmembrane region DJ46_757 PF02016 LD-carboxypeptidase N-terminal domain DJ46_757 PF17676 LD-carboxypeptidase C-terminal domain DJ46_758 PF00768 D-alanyl-D-alanine carboxypeptidase DJ46_758 PF07943 Penicillin-binding protein 5, C-terminal domain DJ46_760 PF01476 LysM domain DJ46_760 PF00877 NlpC/P60 family DJ46_762 PF00005 ABC transporter DJ46_762 PF00664 ABC transporter transmembrane region DJ46_763 PF00005 ABC transporter DJ46_763 PF00664 ABC transporter transmembrane region DJ46_764 PF00072 Response regulator receiver domain DJ46_764 PF00486 Transcriptional regulatory protein, C terminal DJ46_765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_765 PF00989 PAS fold DJ46_765 PF16736 Single Cache-like DJ46_765 PF00512 His Kinase A (phospho-acceptor) domain DJ46_767 PF00106 short chain dehydrogenase DJ46_768 PF04439 Streptomycin adenylyltransferase DJ46_769 PF01522 Polysaccharide deacetylase DJ46_769 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain DJ46_773 PF03447 Homoserine dehydrogenase, NAD binding domain DJ46_773 PF00742 Homoserine dehydrogenase DJ46_773 PF01842 ACT domain DJ46_774 PF00291 Pyridoxal-phosphate dependent enzyme DJ46_775 PF08544 GHMP kinases C terminal DJ46_775 PF00288 GHMP kinases N terminal domain DJ46_778 PF03816 Cell envelope-related transcriptional attenuator domain DJ46_78 PF02368 Bacterial Ig-like domain (group 2) DJ46_780 PF00072 Response regulator receiver domain DJ46_780 PF00486 Transcriptional regulatory protein, C terminal DJ46_781 PF16736 Single Cache-like DJ46_781 PF00989 PAS fold DJ46_781 PF00512 His Kinase A (phospho-acceptor) domain DJ46_781 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ46_782 PF01522 Polysaccharide deacetylase DJ46_784 PF02308 MgtC family DJ46_785 PF00583 Acetyltransferase (GNAT) family DJ46_786 PF04183 IucA / IucC family DJ46_786 PF06276 Ferric iron reductase FhuF-like transporter DJ46_787 PF04183 IucA / IucC family DJ46_787 PF06276 Ferric iron reductase FhuF-like transporter DJ46_788 PF00501 AMP-binding enzyme DJ46_788 PF13193 AMP-binding enzyme C-terminal domain DJ46_79 PF00474 Sodium:solute symporter family DJ46_791 PF01261 Xylose isomerase-like TIM barrel DJ46_792 PF00269 Small, acid-soluble spore proteins, alpha/beta type DJ46_793 PF07690 Major Facilitator Superfamily DJ46_794 PF07690 Major Facilitator Superfamily DJ46_795 PF07690 Major Facilitator Superfamily DJ46_796 PF01810 LysE type translocator DJ46_798 PF01734 Patatin-like phospholipase DJ46_8 PF13509 S1 domain DJ46_8 PF17783 CvfB-like winged helix domain DJ46_803 PF13344 Haloacid dehalogenase-like hydrolase DJ46_803 PF00293 NUDIX domain DJ46_804 PF02540 NAD synthase DJ46_805 PF02687 FtsX-like permease family DJ46_806 PF02687 FtsX-like permease family DJ46_807 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DJ46_807 PF18277 AbrB C-terminal domain DJ46_808 PF00082 Subtilase family DJ46_809 PF01022 Bacterial regulatory protein, arsR family DJ46_81 PF00117 Glutamine amidotransferase class-I DJ46_81 PF02885 Glycosyl transferase family, helical bundle domain DJ46_81 PF00591 Glycosyl transferase family, a/b domain DJ46_810 PF00248 Aldo/keto reductase family DJ46_811 PF07690 Major Facilitator Superfamily DJ46_815 PF03193 RsgA GTPase DJ46_816 PF02743 Cache domain DJ46_816 PF00672 HAMP domain DJ46_816 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ46_82 PF00591 Glycosyl transferase family, a/b domain DJ46_82 PF02885 Glycosyl transferase family, helical bundle domain DJ46_820 PF00210 Ferritin-like domain DJ46_823 PF00296 Luciferase-like monooxygenase DJ46_825 PF01593 Flavin containing amine oxidoreductase DJ46_827 PF00248 Aldo/keto reductase family DJ46_828 PF07683 Cobalamin synthesis protein cobW C-terminal domain DJ46_828 PF02492 CobW/HypB/UreG, nucleotide-binding domain DJ46_829 PF00583 Acetyltransferase (GNAT) family DJ46_83 PF00218 Indole-3-glycerol phosphate synthase DJ46_839 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment DJ46_839 PF01297 Zinc-uptake complex component A periplasmic DJ46_84 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DJ46_841 PF13460 NAD(P)H-binding DJ46_842 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DJ46_843 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DJ46_843 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DJ46_845 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ46_846 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ46_848 PF00300 Histidine phosphatase superfamily (branch 1) DJ46_85 PF00291 Pyridoxal-phosphate dependent enzyme DJ46_850 PF08757 CotH kinase protein DJ46_851 PF00293 NUDIX domain DJ46_852 PF09335 SNARE associated Golgi protein DJ46_853 PF14667 Polysaccharide biosynthesis C-terminal domain DJ46_853 PF01943 Polysaccharide biosynthesis protein DJ46_855 PF03773 Predicted permease DJ46_856 PF09323 Domain of unknown function (DUF1980) DJ46_857 PF03061 Thioesterase superfamily DJ46_858 PF13091 PLD-like domain DJ46_858 PF13396 Phospholipase_D-nuclease N-terminal DJ46_86 PF00290 Tryptophan synthase alpha chain DJ46_861 PF13460 NAD(P)H-binding DJ46_862 PF04306 Protein of unknown function (DUF456) DJ46_863 PF01595 Cyclin M transmembrane N-terminal domain DJ46_863 PF00571 CBS domain DJ46_863 PF03471 Transporter associated domain DJ46_866 PF05525 Branched-chain amino acid transport protein DJ46_867 PF01588 Putative tRNA binding domain DJ46_871 PF07454 Stage II sporulation protein P (SpoIIP) DJ46_873 PF02557 D-alanyl-D-alanine carboxypeptidase DJ46_875 PF01425 Amidase DJ46_876 PF07690 Major Facilitator Superfamily DJ46_878 PF01145 SPFH domain / Band 7 family DJ46_879 PF00300 Histidine phosphatase superfamily (branch 1) DJ46_88 PF02652 L-lactate permease DJ46_882 PF00842 Alanine racemase, C-terminal domain DJ46_882 PF01168 Alanine racemase, N-terminal domain DJ46_886 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase DJ46_887 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DJ46_887 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DJ46_888 PF00392 Bacterial regulatory proteins, gntR family DJ46_888 PF00155 Aminotransferase class I and II DJ46_89 PF10042 Uncharacterized conserved protein (DUF2278) DJ46_894 PF00583 Acetyltransferase (GNAT) family DJ46_903 PF09579 Sporulation protein YtfJ (Spore_YtfJ) DJ46_908 PF01209 ubiE/COQ5 methyltransferase family DJ46_909 PF01268 Formate--tetrahydrofolate ligase DJ46_911 PF00271 Helicase conserved C-terminal domain DJ46_911 PF00270 DEAD/DEAH box helicase DJ46_912 PF01261 Xylose isomerase-like TIM barrel DJ46_913 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ46_915 PF00107 Zinc-binding dehydrogenase DJ46_915 PF08240 Alcohol dehydrogenase GroES-like domain DJ46_916 PF08281 Sigma-70, region 4 DJ46_916 PF04542 Sigma-70 region 2 DJ46_921 PF00255 Glutathione peroxidase DJ46_922 PF01841 Transglutaminase-like superfamily DJ46_922 PF13559 Domain of unknown function (DUF4129) DJ46_922 PF11992 Domain of unknown function (DUF3488) DJ46_923 PF01882 Protein of unknown function DUF58 DJ46_924 PF17863 AAA lid domain DJ46_924 PF07726 ATPase family associated with various cellular activities (AAA) DJ46_927 PF01568 Molydopterin dinucleotide binding domain DJ46_927 PF00384 Molybdopterin oxidoreductase DJ46_927 PF14710 Respiratory nitrate reductase alpha N-terminal DJ46_928 PF13247 4Fe-4S dicluster domain DJ46_928 PF14711 Respiratory nitrate reductase beta C-terminal DJ46_929 PF02613 Nitrate reductase delta subunit DJ46_93 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ46_93 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DJ46_930 PF02665 Nitrate reductase gamma subunit DJ46_931 PF00392 Bacterial regulatory proteins, gntR family DJ46_931 PF00155 Aminotransferase class I and II DJ46_932 PF00005 ABC transporter DJ46_934 PF00325 Bacterial regulatory proteins, crp family DJ46_934 PF00027 Cyclic nucleotide-binding domain DJ46_935 PF06463 Molybdenum Cofactor Synthesis C DJ46_935 PF04055 Radical SAM superfamily DJ46_936 PF00899 ThiF family DJ46_937 PF03453 MoeA N-terminal region (domain I and II) DJ46_937 PF00994 Probable molybdopterin binding domain DJ46_937 PF03454 MoeA C-terminal region (domain IV) DJ46_938 PF02391 MoaE protein DJ46_940 PF07690 Major Facilitator Superfamily DJ46_944 PF01903 CbiX DJ46_945 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DJ46_946 PF00355 Rieske [2Fe-2S] domain DJ46_947 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DJ46_947 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ46_947 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DJ46_947 PF18267 Rubredoxin NAD+ reductase C-terminal domain DJ46_947 PF04324 BFD-like [2Fe-2S] binding domain DJ46_948 PF01814 Hemerythrin HHE cation binding domain DJ46_948 PF04405 Domain of Unknown function (DUF542) DJ46_955 PF04232 Stage V sporulation protein S (SpoVS) DJ46_958 PF01510 N-acetylmuramoyl-L-alanine amidase DJ46_961 PF01966 HD domain DJ46_962 PF00005 ABC transporter DJ46_962 PF16326 ABC transporter C-terminal domain DJ46_962 PF12848 ABC transporter DJ46_965 PF00436 Single-strand binding protein family DJ46_966 PF00440 Bacterial regulatory proteins, tetR family DJ46_967 PF01494 FAD binding domain DJ46_968 PF01494 FAD binding domain DJ46_969 PF08712 Scaffold protein Nfu/NifU N terminal DJ46_969 PF13769 Virulence factor DJ46_971 PF06491 Disulphide isomerase DJ46_972 PF04445 Putative SAM-dependent methyltransferase DJ46_973 PF00750 tRNA synthetases class I (R) DJ46_973 PF05746 DALR anticodon binding domain DJ46_973 PF03485 Arginyl tRNA synthetase N terminal domain DJ46_979 PF00133 tRNA synthetases class I (I, L, M and V) DJ46_979 PF08264 Anticodon-binding domain of tRNA DJ46_982 PF01225 Mur ligase family, catalytic domain DJ46_982 PF08245 Mur ligase middle domain DJ46_982 PF02875 Mur ligase family, glutamate ligase domain DJ46_983 PF00152 tRNA synthetases class II (D, K and N) DJ46_983 PF01336 OB-fold nucleic acid binding domain DJ46_987 PF12538 DNA transporter DJ46_987 PF01580 FtsK/SpoIIIE family DJ46_99 PF00364 Biotin-requiring enzyme DJ46_99 PF02817 e3 binding domain DJ46_99 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain)