DJ46_100	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
DJ46_1020	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
DJ46_1020	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
DJ46_1034	PWY-3841	folate transformations II
DJ46_1034	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
DJ46_1034	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
DJ46_1034	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
DJ46_1034	PWY-7199	pyrimidine deoxyribonucleosides salvage
DJ46_1034	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
DJ46_1035	PWY-3841	folate transformations II
DJ46_1035	PWY-6614	tetrahydrofolate biosynthesis
DJ46_1038	PWY-5667	CDP-diacylglycerol biosynthesis I
DJ46_1038	PWY-5981	CDP-diacylglycerol biosynthesis III
DJ46_1038	PWY-6453	stigma estolide biosynthesis
DJ46_1038	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
DJ46_1038	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
DJ46_1038	PWY-7587	oleate biosynthesis III (cyanobacteria)
DJ46_1038	PWY-7589	palmitoleate biosynthesis III (cyanobacteria)
DJ46_1038	PWY-7782	DJ46_1038
DJ46_114	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
DJ46_114	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
DJ46_1143	PWY-5747	2-methylcitrate cycle II
DJ46_1146	PWY-5642	2,4-dinitrotoluene degradation
DJ46_1157	PWY-5901	2,3-dihydroxybenzoate biosynthesis
DJ46_1158	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
DJ46_1158	PWY-5901	2,3-dihydroxybenzoate biosynthesis
DJ46_1158	PWY-6406	salicylate biosynthesis I
DJ46_1164	PWY-6012	acyl carrier protein metabolism I
DJ46_1164	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
DJ46_1164	PWY-6289	petrobactin biosynthesis
DJ46_1208	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
DJ46_1225	PWY-2941	L-lysine biosynthesis II
DJ46_1225	PWY-2942	L-lysine biosynthesis III
DJ46_1225	PWY-5097	L-lysine biosynthesis VI
DJ46_1225	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
DJ46_1225	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
DJ46_1225	PWY-6559	spermidine biosynthesis II
DJ46_1225	PWY-6562	norspermidine biosynthesis
DJ46_1225	PWY-7153	grixazone biosynthesis
DJ46_1225	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
DJ46_1225	PWY-7977	DJ46_1225
DJ46_1235	PWY-7883	DJ46_1235
DJ46_1251	PWY-7883	DJ46_1251
DJ46_1271	PWY-1622	formaldehyde assimilation I (serine pathway)
DJ46_1271	PWY-5484	glycolysis II (from fructose 6-phosphate)
DJ46_1293	PWY-5642	2,4-dinitrotoluene degradation
DJ46_1297	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
DJ46_1333	PWY-4381	fatty acid biosynthesis initiation I
DJ46_1333	PWY-5743	3-hydroxypropanoate cycle
DJ46_1333	PWY-5744	glyoxylate assimilation
DJ46_1333	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
DJ46_1333	PWY-6722	candicidin biosynthesis
DJ46_1334	PWY-5108	L-isoleucine biosynthesis V
DJ46_1334	PWY-5132	humulone biosynthesis
DJ46_1334	PWY-5133	cohumulone biosynthesis
DJ46_1334	PWY-6672	<i>cis</i>-genanyl-CoA degradation
DJ46_1334	PWY-7118	chitin degradation to ethanol
DJ46_1334	PWY-7857	DJ46_1334
DJ46_1345	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
DJ46_1345	PWY-6153	autoinducer AI-2 biosynthesis I
DJ46_1345	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
DJ46_1393	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
DJ46_1393	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
DJ46_1393	PWY-7953	DJ46_1393
DJ46_1394	PWY-6899	base-degraded thiamin salvage
DJ46_1394	PWY-7356	thiamin salvage IV (yeast)
DJ46_1416	PWY-5331	taurine biosynthesis
DJ46_1422	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
DJ46_1422	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
DJ46_1454	PWY-6788	cellulose degradation II (fungi)
DJ46_1484	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
DJ46_1507	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
DJ46_1507	PWY-622	starch biosynthesis
DJ46_1507	PWY-7900	DJ46_1507
DJ46_153	PWY-5676	acetyl-CoA fermentation to butanoate II
DJ46_153	PWY-5741	ethylmalonyl-CoA pathway
DJ46_153	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
DJ46_153	PWY-7948	DJ46_153
DJ46_1530	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
DJ46_1530	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
DJ46_1530	PWY-7717	DJ46_1530
DJ46_1530	PWY-7733	DJ46_1530
DJ46_1530	PWY-7734	DJ46_1530
DJ46_1530	PWY-7765	DJ46_1530
DJ46_1531	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
DJ46_1531	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
DJ46_1550	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
DJ46_1550	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
DJ46_1568	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
DJ46_1568	PWY-5723	Rubisco shunt
DJ46_1581	PWY-7883	DJ46_1581
DJ46_1601	PWY-7805	DJ46_1601
DJ46_1601	PWY-7807	DJ46_1601
DJ46_1607	PWY-2941	L-lysine biosynthesis II
DJ46_1607	PWY-2942	L-lysine biosynthesis III
DJ46_1607	PWY-5097	L-lysine biosynthesis VI
DJ46_1610	PWY-4261	glycerol degradation I
DJ46_1610	PWY-6118	glycerol-3-phosphate shuttle
DJ46_1610	PWY-6952	glycerophosphodiester degradation
DJ46_1638	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
DJ46_1638	PWY-6153	autoinducer AI-2 biosynthesis I
DJ46_1638	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
DJ46_1640	PWY-7815	DJ46_1640
DJ46_1640	PWY-7816	DJ46_1640
DJ46_1640	PWY-7819	DJ46_1640
DJ46_166	PWY-6832	2-aminoethylphosphonate degradation II
DJ46_1668	PWY-5971	palmitate biosynthesis II (bacteria and plants)
DJ46_1668	PWY-5973	<i>cis</i>-vaccenate biosynthesis
DJ46_1668	PWY-5989	stearate biosynthesis II (bacteria and plants)
DJ46_1668	PWY-5994	palmitate biosynthesis I (animals and fungi)
DJ46_1668	PWY-6113	superpathway of mycolate biosynthesis
DJ46_1668	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
DJ46_1668	PWY-6519	8-amino-7-oxononanoate biosynthesis I
DJ46_1668	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
DJ46_1668	PWY-7663	gondoate biosynthesis (anaerobic)
DJ46_1668	PWY-7664	oleate biosynthesis IV (anaerobic)
DJ46_1668	PWY-7858	DJ46_1668
DJ46_1668	PWYG-321	mycolate biosynthesis
DJ46_1669	PWY-3961	phosphopantothenate biosynthesis II
DJ46_1717	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
DJ46_1718	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
DJ46_1720	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
DJ46_1721	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
DJ46_1721	PWY-3461	L-tyrosine biosynthesis II
DJ46_1721	PWY-3462	L-phenylalanine biosynthesis II
DJ46_1721	PWY-6120	L-tyrosine biosynthesis III
DJ46_1721	PWY-6164	3-dehydroquinate biosynthesis I
DJ46_1721	PWY-6627	salinosporamide A biosynthesis
DJ46_1721	PWY-7626	bacilysin biosynthesis
DJ46_1721	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
DJ46_1736	PWY-7254	TCA cycle VII (acetate-producers)
DJ46_1754	PWY-3341	L-proline biosynthesis III
DJ46_1754	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
DJ46_1755	PWY-3341	L-proline biosynthesis III
DJ46_1755	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
DJ46_1756	PWY-3341	L-proline biosynthesis III
DJ46_1756	PWY-4981	L-proline biosynthesis II (from arginine)
DJ46_1756	PWY-6344	L-ornithine degradation II (Stickland reaction)
DJ46_1762	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
DJ46_1762	PWY-5491	diethylphosphate degradation
DJ46_1766	PWY-6303	methyl indole-3-acetate interconversion
DJ46_1766	PWY-6857	retinol biosynthesis
DJ46_1791	PWY-6610	adenine and adenosine salvage IV
DJ46_184	PWY-6703	preQ<sub>0</sub> biosynthesis
DJ46_1847	PWY-7942	DJ46_1847
DJ46_1851	PWY-4041	&gamma;-glutamyl cycle
DJ46_1851	PWY-7942	DJ46_1851
DJ46_1853	PWY-4041	&gamma;-glutamyl cycle
DJ46_1853	PWY-7942	DJ46_1853
DJ46_186	PWY-6703	preQ<sub>0</sub> biosynthesis
DJ46_187	PWY-6700	queuosine biosynthesis
DJ46_1888	PWY-5392	reductive TCA cycle II
DJ46_1888	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
DJ46_1888	PWY-5690	TCA cycle II (plants and fungi)
DJ46_1888	PWY-5913	TCA cycle VI (obligate autotrophs)
DJ46_1888	PWY-6728	methylaspartate cycle
DJ46_1888	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
DJ46_1888	PWY-7254	TCA cycle VII (acetate-producers)
DJ46_1888	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
DJ46_1895	PWY-3341	L-proline biosynthesis III
DJ46_1895	PWY-4981	L-proline biosynthesis II (from arginine)
DJ46_1895	PWY-6344	L-ornithine degradation II (Stickland reaction)
DJ46_1938	PWY-5839	menaquinol-7 biosynthesis
DJ46_1938	PWY-5851	demethylmenaquinol-9 biosynthesis
DJ46_1938	PWY-5852	demethylmenaquinol-8 biosynthesis I
DJ46_1938	PWY-5853	demethylmenaquinol-6 biosynthesis I
DJ46_1938	PWY-5890	menaquinol-10 biosynthesis
DJ46_1938	PWY-5891	menaquinol-11 biosynthesis
DJ46_1938	PWY-5892	menaquinol-12 biosynthesis
DJ46_1938	PWY-5895	menaquinol-13 biosynthesis
DJ46_196	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
DJ46_196	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
DJ46_196	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
DJ46_196	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
DJ46_196	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
DJ46_196	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
DJ46_196	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
DJ46_196	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
DJ46_1971	PWY-5451	acetone degradation I (to methylglyoxal)
DJ46_1971	PWY-5665	vanillin biosynthesis I
DJ46_1971	PWY-6398	melatonin degradation I
DJ46_1971	PWY-6992	1,5-anhydrofructose degradation
DJ46_1971	PWY-7466	acetone degradation III (to propane-1,2-diol)
DJ46_1971	PWY-7826	DJ46_1971
DJ46_198	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
DJ46_198	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
DJ46_198	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
DJ46_198	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
DJ46_198	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
DJ46_198	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
DJ46_198	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
DJ46_198	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
DJ46_199	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
DJ46_199	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
DJ46_199	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
DJ46_199	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
DJ46_199	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
DJ46_199	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
DJ46_199	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
DJ46_199	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
DJ46_1995	PWY-4381	fatty acid biosynthesis initiation I
DJ46_2049	PWY-6409	pyoverdine I biosynthesis
DJ46_2049	PWY-6562	norspermidine biosynthesis
DJ46_2049	PWY-761	rhizobactin 1021 biosynthesis
DJ46_2049	PWY-7855	DJ46_2049
DJ46_2049	PWY-7988	DJ46_2049
DJ46_2116	PWY-1042	glycolysis IV (plant cytosol)
DJ46_2116	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
DJ46_2116	PWY-5484	glycolysis II (from fructose 6-phosphate)
DJ46_2116	PWY-5723	Rubisco shunt
DJ46_2116	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
DJ46_2116	PWY-6886	1-butanol autotrophic biosynthesis
DJ46_2116	PWY-6901	superpathway of glucose and xylose degradation
DJ46_2116	PWY-7003	glycerol degradation to butanol
DJ46_2116	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
DJ46_2116	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
DJ46_212	PWY-723	alkylnitronates degradation
DJ46_2140	PWY-7560	methylerythritol phosphate pathway II
DJ46_2159	PWY-4261	glycerol degradation I
DJ46_2159	PWY-5530	sorbitol biosynthesis II
DJ46_2161	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
DJ46_2161	PWY-5723	Rubisco shunt
DJ46_2163	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
DJ46_2163	PWY-5723	Rubisco shunt
DJ46_2163	PWY-6891	thiazole biosynthesis II (Bacillus)
DJ46_2163	PWY-6892	thiazole biosynthesis I (E. coli)
DJ46_2163	PWY-6901	superpathway of glucose and xylose degradation
DJ46_2163	PWY-7560	methylerythritol phosphate pathway II
DJ46_2164	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
DJ46_2165	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
DJ46_2189	PWY-6174	mevalonate pathway II (archaea)
DJ46_2189	PWY-7391	isoprene biosynthesis II (engineered)
DJ46_2189	PWY-7524	mevalonate pathway III (archaea)
DJ46_2189	PWY-922	mevalonate pathway I
DJ46_22	PWY-4381	fatty acid biosynthesis initiation I
DJ46_228	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
DJ46_2324	PWY-4983	L-citrulline-nitric oxide cycle
DJ46_2324	PWY-4984	urea cycle
DJ46_2324	PWY-5	canavanine biosynthesis
DJ46_2324	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
DJ46_2324	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
DJ46_2330	PWY-5367	petroselinate biosynthesis
DJ46_2330	PWY-5971	palmitate biosynthesis II (bacteria and plants)
DJ46_2330	PWY-5973	<i>cis</i>-vaccenate biosynthesis
DJ46_2330	PWY-5989	stearate biosynthesis II (bacteria and plants)
DJ46_2330	PWY-5994	palmitate biosynthesis I (animals and fungi)
DJ46_2330	PWY-6113	superpathway of mycolate biosynthesis
DJ46_2330	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
DJ46_2330	PWY-6519	8-amino-7-oxononanoate biosynthesis I
DJ46_2330	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
DJ46_2330	PWY-7663	gondoate biosynthesis (anaerobic)
DJ46_2330	PWY-7664	oleate biosynthesis IV (anaerobic)
DJ46_2330	PWY-7858	DJ46_2330
DJ46_2330	PWYG-321	mycolate biosynthesis
DJ46_2340	PWY-6823	molybdenum cofactor biosynthesis
DJ46_2340	PWY-7887	DJ46_2340
DJ46_2341	PWY-6823	molybdenum cofactor biosynthesis
DJ46_2344	PWY-6823	molybdenum cofactor biosynthesis
DJ46_2348	PWY-1881	formate oxidation to CO<sub>2</sub>
DJ46_2348	PWY-5497	purine nucleobases degradation II (anaerobic)
DJ46_2348	PWY-6696	oxalate degradation III
DJ46_2348	PWY-7985	DJ46_2348
DJ46_2378	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
DJ46_2378	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
DJ46_2378	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
DJ46_241	PWY-5057	L-valine degradation II
DJ46_241	PWY-5076	L-leucine degradation III
DJ46_241	PWY-5078	L-isoleucine degradation II
DJ46_241	PWY-5101	L-isoleucine biosynthesis II
DJ46_241	PWY-5103	L-isoleucine biosynthesis III
DJ46_241	PWY-5104	L-isoleucine biosynthesis IV
DJ46_241	PWY-5108	L-isoleucine biosynthesis V
DJ46_241	PWY-7767	DJ46_241
DJ46_242	PWY-5101	L-isoleucine biosynthesis II
DJ46_242	PWY-5103	L-isoleucine biosynthesis III
DJ46_242	PWY-5104	L-isoleucine biosynthesis IV
DJ46_242	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
DJ46_242	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
DJ46_242	PWY-6389	(<i>S</i>)-acetoin biosynthesis
DJ46_242	PWY-7111	pyruvate fermentation to isobutanol (engineered)
DJ46_2423	PWY-5028	L-histidine degradation II
DJ46_2423	PWY-5030	L-histidine degradation III
DJ46_2424	PWY-5028	L-histidine degradation II
DJ46_2424	PWY-5030	L-histidine degradation III
DJ46_2425	PWY-5028	L-histidine degradation II
DJ46_2425	PWY-5030	L-histidine degradation III
DJ46_243	PWY-5101	L-isoleucine biosynthesis II
DJ46_243	PWY-5103	L-isoleucine biosynthesis III
DJ46_243	PWY-5104	L-isoleucine biosynthesis IV
DJ46_243	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
DJ46_243	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
DJ46_243	PWY-6389	(<i>S</i>)-acetoin biosynthesis
DJ46_243	PWY-7111	pyruvate fermentation to isobutanol (engineered)
DJ46_244	PWY-5103	L-isoleucine biosynthesis III
DJ46_244	PWY-7111	pyruvate fermentation to isobutanol (engineered)
DJ46_245	PWY-6871	3-methylbutanol biosynthesis
DJ46_2454	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
DJ46_2454	PWY-5723	Rubisco shunt
DJ46_2454	PWY-6891	thiazole biosynthesis II (Bacillus)
DJ46_2454	PWY-6892	thiazole biosynthesis I (E. coli)
DJ46_2454	PWY-6901	superpathway of glucose and xylose degradation
DJ46_2454	PWY-7560	methylerythritol phosphate pathway II
DJ46_246	PWY-7396	butanol and isobutanol biosynthesis (engineered)
DJ46_2516	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
DJ46_2537	PWY-381	nitrate reduction II (assimilatory)
DJ46_2537	PWY-5675	nitrate reduction V (assimilatory)
DJ46_2537	PWY-6549	L-glutamine biosynthesis III
DJ46_2537	PWY-6963	ammonia assimilation cycle I
DJ46_2537	PWY-6964	ammonia assimilation cycle II
DJ46_2548	PWY-2781	<i>cis</i>-zeatin biosynthesis
DJ46_2560	PWY-6855	chitin degradation I (archaea)
DJ46_2560	PWY-6902	chitin degradation II
DJ46_2560	PWY-7822	DJ46_2560
DJ46_261	PWY-5669	phosphatidylethanolamine biosynthesis I
DJ46_2613	PWY-5392	reductive TCA cycle II
DJ46_2613	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
DJ46_2614	PWY-7533	gliotoxin biosynthesis
DJ46_2621	PWY-5269	cardiolipin biosynthesis II
DJ46_2621	PWY-5668	cardiolipin biosynthesis I
DJ46_2621	PWY-7817	DJ46_2621
DJ46_2638	PWY-2941	L-lysine biosynthesis II
DJ46_2638	PWY-2942	L-lysine biosynthesis III
DJ46_2638	PWY-5097	L-lysine biosynthesis VI
DJ46_2639	PWY-2941	L-lysine biosynthesis II
DJ46_2639	PWY-2942	L-lysine biosynthesis III
DJ46_2639	PWY-5097	L-lysine biosynthesis VI
DJ46_2639	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
DJ46_2639	PWY-6559	spermidine biosynthesis II
DJ46_2639	PWY-6562	norspermidine biosynthesis
DJ46_2639	PWY-7153	grixazone biosynthesis
DJ46_2639	PWY-7977	DJ46_2639
DJ46_264	PWY-2941	L-lysine biosynthesis II
DJ46_264	PWY-2942	L-lysine biosynthesis III
DJ46_264	PWY-5097	L-lysine biosynthesis VI
DJ46_2640	PWY-2941	L-lysine biosynthesis II
DJ46_2640	PWY-2942	L-lysine biosynthesis III
DJ46_2640	PWY-5097	L-lysine biosynthesis VI
DJ46_2640	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
DJ46_2640	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
DJ46_2640	PWY-6559	spermidine biosynthesis II
DJ46_2640	PWY-6562	norspermidine biosynthesis
DJ46_2640	PWY-7153	grixazone biosynthesis
DJ46_2640	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
DJ46_2640	PWY-7977	DJ46_2640
DJ46_2648	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
DJ46_2648	PWY-6167	flavin biosynthesis II (archaea)
DJ46_2648	PWY-6168	flavin biosynthesis III (fungi)
DJ46_2648	PWY-7863	DJ46_2648
DJ46_2660	PWY-7560	methylerythritol phosphate pathway II
DJ46_2661	PWY-5667	CDP-diacylglycerol biosynthesis I
DJ46_2661	PWY-5981	CDP-diacylglycerol biosynthesis III
DJ46_2661	PWY-7817	DJ46_2661
DJ46_267	PWY-5278	sulfite oxidation III
DJ46_267	PWY-5340	sulfate activation for sulfonation
DJ46_267	PWY-6683	sulfate reduction III (assimilatory)
DJ46_267	PWY-6932	selenate reduction
DJ46_2674	PWY-5392	reductive TCA cycle II
DJ46_2674	PWY-5537	pyruvate fermentation to acetate V
DJ46_2674	PWY-5538	pyruvate fermentation to acetate VI
DJ46_2674	PWY-5690	TCA cycle II (plants and fungi)
DJ46_2674	PWY-5913	TCA cycle VI (obligate autotrophs)
DJ46_2674	PWY-6728	methylaspartate cycle
DJ46_2674	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
DJ46_2674	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
DJ46_2675	PWY-5392	reductive TCA cycle II
DJ46_2675	PWY-5537	pyruvate fermentation to acetate V
DJ46_2675	PWY-5538	pyruvate fermentation to acetate VI
DJ46_2675	PWY-5690	TCA cycle II (plants and fungi)
DJ46_2675	PWY-5913	TCA cycle VI (obligate autotrophs)
DJ46_2675	PWY-6728	methylaspartate cycle
DJ46_2675	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
DJ46_2675	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
DJ46_268	PWY-5340	sulfate activation for sulfonation
DJ46_2680	PWY-6829	tRNA methylation (yeast)
DJ46_2680	PWY-7285	methylwyosine biosynthesis
DJ46_2680	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
DJ46_269	PWY-6683	sulfate reduction III (assimilatory)
DJ46_2690	PWY-5367	petroselinate biosynthesis
DJ46_2690	PWY-5971	palmitate biosynthesis II (bacteria and plants)
DJ46_2690	PWY-5973	<i>cis</i>-vaccenate biosynthesis
DJ46_2690	PWY-5989	stearate biosynthesis II (bacteria and plants)
DJ46_2690	PWY-5994	palmitate biosynthesis I (animals and fungi)
DJ46_2690	PWY-6113	superpathway of mycolate biosynthesis
DJ46_2690	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
DJ46_2690	PWY-6519	8-amino-7-oxononanoate biosynthesis I
DJ46_2690	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
DJ46_2690	PWY-7663	gondoate biosynthesis (anaerobic)
DJ46_2690	PWY-7664	oleate biosynthesis IV (anaerobic)
DJ46_2690	PWY-7858	DJ46_2690
DJ46_2690	PWYG-321	mycolate biosynthesis
DJ46_2691	PWY-4381	fatty acid biosynthesis initiation I
DJ46_2691	PWY-6799	fatty acid biosynthesis (plant mitochondria)
DJ46_2691	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
DJ46_2698	PWY-6898	thiamin salvage III
DJ46_2698	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
DJ46_2698	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
DJ46_2698	PWY-7356	thiamin salvage IV (yeast)
DJ46_2699	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
DJ46_2699	PWY-5723	Rubisco shunt
DJ46_2708	PWY-7851	DJ46_2708
DJ46_271	PWY-5194	siroheme biosynthesis
DJ46_271	PWY-5196	factor 430 biosynthesis
DJ46_271	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
DJ46_2710	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
DJ46_2715	PWY-7799	DJ46_2715
DJ46_2715	PWY-7800	DJ46_2715
DJ46_272	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
DJ46_2721	PWY-5686	UMP biosynthesis
DJ46_2721	PWY-7790	DJ46_2721
DJ46_2721	PWY-7791	DJ46_2721
DJ46_2722	PWY-5686	UMP biosynthesis
DJ46_2722	PWY-7790	DJ46_2722
DJ46_2722	PWY-7791	DJ46_2722
DJ46_2725	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
DJ46_2725	PWY-5686	UMP biosynthesis
DJ46_2725	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
DJ46_2725	PWY-7790	DJ46_2725
DJ46_2725	PWY-7791	DJ46_2725
DJ46_2726	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
DJ46_2726	PWY-5686	UMP biosynthesis
DJ46_2726	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
DJ46_2726	PWY-7790	DJ46_2726
DJ46_2726	PWY-7791	DJ46_2726
DJ46_2727	PWY-5686	UMP biosynthesis
DJ46_2727	PWY-7790	DJ46_2727
DJ46_2727	PWY-7791	DJ46_2727
DJ46_2728	PWY-5686	UMP biosynthesis
DJ46_2728	PWY-7790	DJ46_2728
DJ46_2728	PWY-7791	DJ46_2728
DJ46_273	PWY-5194	siroheme biosynthesis
DJ46_273	PWY-5196	factor 430 biosynthesis
DJ46_273	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
DJ46_2730	PWY-7183	pyrimidine nucleobases salvage I
DJ46_2732	PWY-7884	DJ46_2732
DJ46_2739	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
DJ46_2748	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
DJ46_2748	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
DJ46_2748	PWY-7953	DJ46_2748
DJ46_2749	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
DJ46_2749	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
DJ46_2749	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
DJ46_2749	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
DJ46_2750	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
DJ46_2750	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
DJ46_2750	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
DJ46_2750	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
DJ46_2751	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
DJ46_2751	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
DJ46_2752	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
DJ46_2752	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
DJ46_2752	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
DJ46_2759	PWY-6654	phosphopantothenate biosynthesis III
DJ46_2772	PWY-7883	DJ46_2772
DJ46_2835	PWY-7851	DJ46_2835
DJ46_2847	PWY-7142	cyanide detoxification II
DJ46_2849	PWY-3781	aerobic respiration I (cytochrome c)
DJ46_2849	PWY-4521	arsenite oxidation I (respiratory)
DJ46_2849	PWY-6692	Fe(II) oxidation
DJ46_2849	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
DJ46_2851	PWY-3781	aerobic respiration I (cytochrome c)
DJ46_2851	PWY-4521	arsenite oxidation I (respiratory)
DJ46_2851	PWY-6692	Fe(II) oxidation
DJ46_2851	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
DJ46_2855	PWY-5750	itaconate biosynthesis
DJ46_2855	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
DJ46_2855	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
DJ46_2856	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
DJ46_2856	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
DJ46_2856	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
DJ46_2856	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
DJ46_2860	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
DJ46_2860	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
DJ46_2878	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
DJ46_2878	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
DJ46_2889	PWY-2941	L-lysine biosynthesis II
DJ46_2890	PWY-2941	L-lysine biosynthesis II
DJ46_2912	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
DJ46_2912	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
DJ46_2912	PWY-6936	seleno-amino acid biosynthesis
DJ46_2912	PWY-702	L-methionine biosynthesis II
DJ46_2943	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
DJ46_2943	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
DJ46_2944	PWY-6754	<i>S</i>-methyl-5'-thioadenosine degradation I
DJ46_2947	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
DJ46_2947	PWY-5532	adenosine nucleotides degradation IV
DJ46_2947	PWY-5723	Rubisco shunt
DJ46_2948	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
DJ46_2949	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
DJ46_2950	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
DJ46_2950	PWY-5389	3-methylthiopropanoate biosynthesis
DJ46_2965	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
DJ46_2965	PWY-6855	chitin degradation I (archaea)
DJ46_2965	PWY-6906	chitin derivatives degradation
DJ46_2966	PWY-6906	chitin derivatives degradation
DJ46_2966	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
DJ46_2966	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
DJ46_298	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
DJ46_298	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
DJ46_298	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
DJ46_298	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
DJ46_2988	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
DJ46_2988	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
DJ46_2997	PWY-7181	pyrimidine deoxyribonucleosides degradation
DJ46_2998	PWY-4202	arsenate detoxification I (glutaredoxin)
DJ46_2998	PWY-5532	adenosine nucleotides degradation IV
DJ46_2998	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
DJ46_2998	PWY-6608	guanosine nucleotides degradation III
DJ46_2998	PWY-6609	adenine and adenosine salvage III
DJ46_2998	PWY-6611	adenine and adenosine salvage V
DJ46_2998	PWY-6620	guanine and guanosine salvage
DJ46_2998	PWY-6627	salinosporamide A biosynthesis
DJ46_2998	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
DJ46_2998	PWY-7179	purine deoxyribonucleosides degradation I
DJ46_2998	PWY-7179-1	purine deoxyribonucleosides degradation
DJ46_2999	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
DJ46_3021	PWY-7991	DJ46_3021
DJ46_3022	PWY-6167	flavin biosynthesis II (archaea)
DJ46_3022	PWY-6168	flavin biosynthesis III (fungi)
DJ46_3022	PWY-7980	DJ46_3022
DJ46_3023	PWY-6167	flavin biosynthesis II (archaea)
DJ46_3023	PWY-6168	flavin biosynthesis III (fungi)
DJ46_3023	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
DJ46_3023	PWY-7991	DJ46_3023
DJ46_3025	PWY-6167	flavin biosynthesis II (archaea)
DJ46_3025	PWY-6168	flavin biosynthesis III (fungi)
DJ46_3026	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
DJ46_3027	PWY-6519	8-amino-7-oxononanoate biosynthesis I
DJ46_3029	PWY-6519	8-amino-7-oxononanoate biosynthesis I
DJ46_3029	PWY-6578	8-amino-7-oxononanoate biosynthesis III
DJ46_3029	PWY-7147	8-amino-7-oxononanoate biosynthesis II
DJ46_3030	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
DJ46_3039	PWY-4981	L-proline biosynthesis II (from arginine)
DJ46_3039	PWY-4984	urea cycle
DJ46_3039	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
DJ46_3041	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
DJ46_3041	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
DJ46_3044	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
DJ46_3044	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
DJ46_3049	PWY-3341	L-proline biosynthesis III
DJ46_3049	PWY-4981	L-proline biosynthesis II (from arginine)
DJ46_3049	PWY-6344	L-ornithine degradation II (Stickland reaction)
DJ46_305	PWY-4202	arsenate detoxification I (glutaredoxin)
DJ46_305	PWY-5532	adenosine nucleotides degradation IV
DJ46_305	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
DJ46_305	PWY-6608	guanosine nucleotides degradation III
DJ46_305	PWY-6609	adenine and adenosine salvage III
DJ46_305	PWY-6611	adenine and adenosine salvage V
DJ46_305	PWY-6620	guanine and guanosine salvage
DJ46_305	PWY-6627	salinosporamide A biosynthesis
DJ46_305	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
DJ46_305	PWY-7179	purine deoxyribonucleosides degradation I
DJ46_305	PWY-7179-1	purine deoxyribonucleosides degradation
DJ46_3067	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
DJ46_3067	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
DJ46_3067	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
DJ46_3067	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
DJ46_3071	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
DJ46_3071	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
DJ46_3072	PWY-5482	pyruvate fermentation to acetate II
DJ46_3072	PWY-5485	pyruvate fermentation to acetate IV
DJ46_3072	PWY-5497	purine nucleobases degradation II (anaerobic)
DJ46_3074	PWY-1281	sulfoacetaldehyde degradation I
DJ46_3074	PWY-5482	pyruvate fermentation to acetate II
DJ46_3074	PWY-5485	pyruvate fermentation to acetate IV
DJ46_3074	PWY-5497	purine nucleobases degradation II (anaerobic)
DJ46_3074	PWY-6637	sulfolactate degradation II
DJ46_3085	PWY-6891	thiazole biosynthesis II (Bacillus)
DJ46_3085	PWY-6892	thiazole biosynthesis I (E. coli)
DJ46_3085	PWY-7560	methylerythritol phosphate pathway II
DJ46_3089	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
DJ46_3089	PWY-2201	folate transformations I
DJ46_3089	PWY-3841	folate transformations II
DJ46_3089	PWY-5030	L-histidine degradation III
DJ46_3089	PWY-5497	purine nucleobases degradation II (anaerobic)
DJ46_3089	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
DJ46_3089	PWY-7909	DJ46_3089
DJ46_3107	PWY-7799	DJ46_3107
DJ46_3107	PWY-7800	DJ46_3107
DJ46_3108	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
DJ46_3108	PWY-6416	quinate degradation II
DJ46_3108	PWY-6707	gallate biosynthesis
DJ46_311	PWY-6854	ethylene biosynthesis III (microbes)
DJ46_3116	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
DJ46_3116	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
DJ46_312	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
DJ46_312	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
DJ46_3141	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
DJ46_3159	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
DJ46_3159	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
DJ46_3159	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
DJ46_3159	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
DJ46_3160	PWY-2201	folate transformations I
DJ46_3160	PWY-3841	folate transformations II
DJ46_3160	PWY-7977	DJ46_3160
DJ46_3161	PWY-2201	folate transformations I
DJ46_3161	PWY-3841	folate transformations II
DJ46_3169	PWY-2722	trehalose degradation IV
DJ46_3169	PWY-2723	trehalose degradation V
DJ46_3169	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
DJ46_3169	PWY-5661	GDP-glucose biosynthesis
DJ46_3169	PWY-621	sucrose degradation III (sucrose invertase)
DJ46_3169	PWY-7238	sucrose biosynthesis II
DJ46_3169	PWY-7385	1,3-propanediol biosynthesis (engineered)
DJ46_3174	PWY-6749	CMP-legionaminate biosynthesis I
DJ46_3182	PWY-6854	ethylene biosynthesis III (microbes)
DJ46_3195	PWY-7560	methylerythritol phosphate pathway II
DJ46_3206	PWY-6556	pyrimidine ribonucleosides salvage II
DJ46_3206	PWY-7181	pyrimidine deoxyribonucleosides degradation
DJ46_3206	PWY-7193	pyrimidine ribonucleosides salvage I
DJ46_3206	PWY-7199	pyrimidine deoxyribonucleosides salvage
DJ46_3207	PWY-7039	phosphatidate metabolism, as a signaling molecule
DJ46_3207	PWY-7817	DJ46_3207
DJ46_3231	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
DJ46_3233	PWY-3341	L-proline biosynthesis III
DJ46_3233	PWY-4981	L-proline biosynthesis II (from arginine)
DJ46_3233	PWY-6344	L-ornithine degradation II (Stickland reaction)
DJ46_3237	PWY-5381	pyridine nucleotide cycling (plants)
DJ46_3237	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
DJ46_3237	PWY-7761	DJ46_3237
DJ46_3239	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
DJ46_3241	PWY-5269	cardiolipin biosynthesis II
DJ46_3241	PWY-5668	cardiolipin biosynthesis I
DJ46_3241	PWY-7817	DJ46_3241
DJ46_3243	PWY-5669	phosphatidylethanolamine biosynthesis I
DJ46_3252	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
DJ46_3252	PWY-5491	diethylphosphate degradation
DJ46_3263	PWY-7158	L-phenylalanine degradation V
DJ46_3276	PWY-3162	L-tryptophan degradation V (side chain pathway)
DJ46_3276	PWY-5057	L-valine degradation II
DJ46_3276	PWY-5076	L-leucine degradation III
DJ46_3276	PWY-5078	L-isoleucine degradation II
DJ46_3276	PWY-5079	L-phenylalanine degradation III
DJ46_3276	PWY-5082	L-methionine degradation III
DJ46_3276	PWY-5480	pyruvate fermentation to ethanol I
DJ46_3276	PWY-5486	pyruvate fermentation to ethanol II
DJ46_3276	PWY-5751	phenylethanol biosynthesis
DJ46_3276	PWY-6313	serotonin degradation
DJ46_3276	PWY-6333	acetaldehyde biosynthesis I
DJ46_3276	PWY-6342	noradrenaline and adrenaline degradation
DJ46_3276	PWY-6587	pyruvate fermentation to ethanol III
DJ46_3276	PWY-6802	salidroside biosynthesis
DJ46_3276	PWY-6871	3-methylbutanol biosynthesis
DJ46_3276	PWY-7013	L-1,2-propanediol degradation
DJ46_3276	PWY-7111	pyruvate fermentation to isobutanol (engineered)
DJ46_3276	PWY-7118	chitin degradation to ethanol
DJ46_3276	PWY-7396	butanol and isobutanol biosynthesis (engineered)
DJ46_3279	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
DJ46_3279	PWY-6153	autoinducer AI-2 biosynthesis I
DJ46_3279	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
DJ46_3285	PWY-7193	pyrimidine ribonucleosides salvage I
DJ46_3301	PWY-7887	DJ46_3301
DJ46_3301	PWY-7892	DJ46_3301
DJ46_3302	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
DJ46_3312	PWY-6605	adenine and adenosine salvage II
DJ46_3312	PWY-6610	adenine and adenosine salvage IV
DJ46_3312	PWY-7805	DJ46_3312
DJ46_3312	PWY-7807	DJ46_3312
DJ46_3313	PWY-7805	DJ46_3313
DJ46_3313	PWY-7807	DJ46_3313
DJ46_3321	PWY-6700	queuosine biosynthesis
DJ46_3322	PWY-6700	queuosine biosynthesis
DJ46_3334	PWY-5316	nicotine biosynthesis
DJ46_3334	PWY-7342	superpathway of nicotine biosynthesis
DJ46_3335	PWY-5316	nicotine biosynthesis
DJ46_3335	PWY-5381	pyridine nucleotide cycling (plants)
DJ46_3335	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
DJ46_3335	PWY-7342	superpathway of nicotine biosynthesis
DJ46_3336	PWY-5316	nicotine biosynthesis
DJ46_3336	PWY-7342	superpathway of nicotine biosynthesis
DJ46_3337	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
DJ46_3340	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
DJ46_3363	PWY-2161	folate polyglutamylation
DJ46_3367	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
DJ46_3368	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
DJ46_3368	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
DJ46_3369	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
DJ46_3369	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
DJ46_3370	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
DJ46_3370	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
DJ46_3372	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
DJ46_3391	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
DJ46_3391	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
DJ46_340	PWY-7205	CMP phosphorylation
DJ46_342	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
DJ46_342	PWY-6174	mevalonate pathway II (archaea)
DJ46_342	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
DJ46_342	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
DJ46_342	PWY-7102	bisabolene biosynthesis
DJ46_342	PWY-7391	isoprene biosynthesis II (engineered)
DJ46_342	PWY-7524	mevalonate pathway III (archaea)
DJ46_342	PWY-7560	methylerythritol phosphate pathway II
DJ46_342	PWY-922	mevalonate pathway I
DJ46_3424	PWY-3781	aerobic respiration I (cytochrome c)
DJ46_3424	PWY-4302	aerobic respiration III (alternative oxidase pathway)
DJ46_3424	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
DJ46_3424	PWY-5690	TCA cycle II (plants and fungi)
DJ46_3424	PWY-6728	methylaspartate cycle
DJ46_3424	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
DJ46_3424	PWY-7254	TCA cycle VII (acetate-producers)
DJ46_3424	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
DJ46_3425	PWY-3781	aerobic respiration I (cytochrome c)
DJ46_3425	PWY-4302	aerobic respiration III (alternative oxidase pathway)
DJ46_3425	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
DJ46_3425	PWY-5690	TCA cycle II (plants and fungi)
DJ46_3425	PWY-6728	methylaspartate cycle
DJ46_3425	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
DJ46_3425	PWY-7254	TCA cycle VII (acetate-producers)
DJ46_3425	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
DJ46_348	PWY-5667	CDP-diacylglycerol biosynthesis I
DJ46_348	PWY-5981	CDP-diacylglycerol biosynthesis III
DJ46_348	PWY-7902	DJ46_348
DJ46_3493	PWY-6834	spermidine biosynthesis III
DJ46_3494	PWY-1042	glycolysis IV (plant cytosol)
DJ46_3494	PWY-5484	glycolysis II (from fructose 6-phosphate)
DJ46_3494	PWY-6901	superpathway of glucose and xylose degradation
DJ46_3494	PWY-7003	glycerol degradation to butanol
DJ46_3495	PWY-7851	DJ46_3495
DJ46_3503	PWY-1622	formaldehyde assimilation I (serine pathway)
DJ46_3503	PWY-5392	reductive TCA cycle II
DJ46_3503	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
DJ46_3503	PWY-5690	TCA cycle II (plants and fungi)
DJ46_3503	PWY-5913	TCA cycle VI (obligate autotrophs)
DJ46_3503	PWY-6728	methylaspartate cycle
DJ46_3503	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
DJ46_3503	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
DJ46_3503	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
DJ46_3504	PWY-5913	TCA cycle VI (obligate autotrophs)
DJ46_3504	PWY-6549	L-glutamine biosynthesis III
DJ46_3504	PWY-6728	methylaspartate cycle
DJ46_3504	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
DJ46_3504	PWY-7124	ethylene biosynthesis V (engineered)
DJ46_3504	PWY-7254	TCA cycle VII (acetate-producers)
DJ46_3504	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
DJ46_3509	PWY-1042	glycolysis IV (plant cytosol)
DJ46_3509	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
DJ46_3509	PWY-5484	glycolysis II (from fructose 6-phosphate)
DJ46_3509	PWY-5723	Rubisco shunt
DJ46_3509	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
DJ46_3509	PWY-6886	1-butanol autotrophic biosynthesis
DJ46_3509	PWY-6901	superpathway of glucose and xylose degradation
DJ46_3509	PWY-7003	glycerol degradation to butanol
DJ46_3509	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
DJ46_3509	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
DJ46_3510	PWY-1042	glycolysis IV (plant cytosol)
DJ46_3510	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
DJ46_3510	PWY-5484	glycolysis II (from fructose 6-phosphate)
DJ46_3510	PWY-7385	1,3-propanediol biosynthesis (engineered)
DJ46_3511	PWY-4381	fatty acid biosynthesis initiation I
DJ46_3511	PWY-5743	3-hydroxypropanoate cycle
DJ46_3511	PWY-5744	glyoxylate assimilation
DJ46_3511	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
DJ46_3511	PWY-6722	candicidin biosynthesis
DJ46_3512	PWY-4381	fatty acid biosynthesis initiation I
DJ46_3512	PWY-5743	3-hydroxypropanoate cycle
DJ46_3512	PWY-5744	glyoxylate assimilation
DJ46_3512	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
DJ46_3512	PWY-6722	candicidin biosynthesis
DJ46_3518	PWY-7805	DJ46_3518
DJ46_3518	PWY-7807	DJ46_3518
DJ46_3522	PWY-1281	sulfoacetaldehyde degradation I
DJ46_3522	PWY-5482	pyruvate fermentation to acetate II
DJ46_3522	PWY-5485	pyruvate fermentation to acetate IV
DJ46_3522	PWY-5497	purine nucleobases degradation II (anaerobic)
DJ46_3522	PWY-6637	sulfolactate degradation II
DJ46_3525	PWY-7799	DJ46_3525
DJ46_3525	PWY-7800	DJ46_3525
DJ46_354	PWY-5663	tetrahydrobiopterin biosynthesis I
DJ46_354	PWY-5664	tetrahydrobiopterin biosynthesis II
DJ46_354	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
DJ46_354	PWY-6703	preQ<sub>0</sub> biosynthesis
DJ46_354	PWY-6983	tetrahydrobiopterin biosynthesis III
DJ46_354	PWY-7442	drosopterin and aurodrosopterin biosynthesis
DJ46_354	PWY-7852	DJ46_354
DJ46_3543	PWY-4983	L-citrulline-nitric oxide cycle
DJ46_3543	PWY-4984	urea cycle
DJ46_3543	PWY-5	canavanine biosynthesis
DJ46_3543	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
DJ46_3543	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
DJ46_3544	PWY-4983	L-citrulline-nitric oxide cycle
DJ46_3544	PWY-4984	urea cycle
DJ46_3544	PWY-5	canavanine biosynthesis
DJ46_3544	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
DJ46_3544	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
DJ46_355	PWY-5807	heptaprenyl diphosphate biosynthesis
DJ46_3552	PWY-5482	pyruvate fermentation to acetate II
DJ46_3552	PWY-5485	pyruvate fermentation to acetate IV
DJ46_3552	PWY-5497	purine nucleobases degradation II (anaerobic)
DJ46_3557	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
DJ46_3557	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
DJ46_3557	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
DJ46_356	PWY-5839	menaquinol-7 biosynthesis
DJ46_356	PWY-5844	menaquinol-9 biosynthesis
DJ46_356	PWY-5849	menaquinol-6 biosynthesis
DJ46_356	PWY-5890	menaquinol-10 biosynthesis
DJ46_356	PWY-5891	menaquinol-11 biosynthesis
DJ46_356	PWY-5892	menaquinol-12 biosynthesis
DJ46_356	PWY-5895	menaquinol-13 biosynthesis
DJ46_3563	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
DJ46_357	PWY-5807	heptaprenyl diphosphate biosynthesis
DJ46_358	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
DJ46_358	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
DJ46_358	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
DJ46_358	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
DJ46_358	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
DJ46_358	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
DJ46_358	PWY-7205	CMP phosphorylation
DJ46_358	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
DJ46_358	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
DJ46_358	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
DJ46_358	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
DJ46_358	PWY-7224	purine deoxyribonucleosides salvage
DJ46_358	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
DJ46_358	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
DJ46_359	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
DJ46_360	PWY-6164	3-dehydroquinate biosynthesis I
DJ46_3601	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
DJ46_3601	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
DJ46_3601	PWY-7953	DJ46_3601
DJ46_3602	PWY-5381	pyridine nucleotide cycling (plants)
DJ46_3634	PWY-6823	molybdenum cofactor biosynthesis
DJ46_3634	PWY-7887	DJ46_3634
DJ46_3636	PWY-6823	molybdenum cofactor biosynthesis
DJ46_3637	PWY-6823	molybdenum cofactor biosynthesis
DJ46_3639	PWY-6823	molybdenum cofactor biosynthesis
DJ46_3666	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
DJ46_3666	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
DJ46_3674	PWY-5964	guanylyl molybdenum cofactor biosynthesis
DJ46_3674	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
DJ46_3678	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
DJ46_3678	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
DJ46_3679	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
DJ46_3679	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
DJ46_3701	PWY-6502	oxidized GTP and dGTP detoxification
DJ46_3705	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
DJ46_3705	PWY-6153	autoinducer AI-2 biosynthesis I
DJ46_3705	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
DJ46_3706	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
DJ46_3706	PWY-5743	3-hydroxypropanoate cycle
DJ46_3706	PWY-5744	glyoxylate assimilation
DJ46_3706	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
DJ46_3706	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
DJ46_3706	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
DJ46_3706	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
DJ46_3731	PWY-6599	guanine and guanosine salvage II
DJ46_3731	PWY-6609	adenine and adenosine salvage III
DJ46_3731	PWY-6610	adenine and adenosine salvage IV
DJ46_3731	PWY-6620	guanine and guanosine salvage
DJ46_375	PWY-2941	L-lysine biosynthesis II
DJ46_375	PWY-2942	L-lysine biosynthesis III
DJ46_375	PWY-5097	L-lysine biosynthesis VI
DJ46_3756	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
DJ46_3756	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
DJ46_3756	PWY-7242	D-fructuronate degradation
DJ46_3756	PWY-7310	D-glucosaminate degradation
DJ46_3756	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
DJ46_3757	PWY-7310	D-glucosaminate degradation
DJ46_3764	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
DJ46_3765	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
DJ46_3766	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
DJ46_3767	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
DJ46_3768	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
DJ46_3769	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
DJ46_3769	PWY-5901	2,3-dihydroxybenzoate biosynthesis
DJ46_3769	PWY-6406	salicylate biosynthesis I
DJ46_3770	PWY-5839	menaquinol-7 biosynthesis
DJ46_3770	PWY-5851	demethylmenaquinol-9 biosynthesis
DJ46_3770	PWY-5852	demethylmenaquinol-8 biosynthesis I
DJ46_3770	PWY-5853	demethylmenaquinol-6 biosynthesis I
DJ46_3770	PWY-5890	menaquinol-10 biosynthesis
DJ46_3770	PWY-5891	menaquinol-11 biosynthesis
DJ46_3770	PWY-5892	menaquinol-12 biosynthesis
DJ46_3770	PWY-5895	menaquinol-13 biosynthesis
DJ46_3776	PWY-5941	glycogen degradation II (eukaryotic)
DJ46_3776	PWY-6731	starch degradation III
DJ46_3776	PWY-6737	starch degradation V
DJ46_3776	PWY-7238	sucrose biosynthesis II
DJ46_3777	PWY-622	starch biosynthesis
DJ46_3779	PWY-622	starch biosynthesis
DJ46_3779	PWY-7902	DJ46_3779
DJ46_3780	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
DJ46_3780	PWY-622	starch biosynthesis
DJ46_3780	PWY-7900	DJ46_3780
DJ46_3781	PWY-5481	pyruvate fermentation to lactate
DJ46_3781	PWY-6901	superpathway of glucose and xylose degradation
DJ46_380	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
DJ46_380	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
DJ46_3812	PWY-3801	sucrose degradation II (sucrose synthase)
DJ46_3812	PWY-5054	sorbitol biosynthesis I
DJ46_3812	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
DJ46_3812	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
DJ46_3812	PWY-5659	GDP-mannose biosynthesis
DJ46_3812	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
DJ46_3812	PWY-621	sucrose degradation III (sucrose invertase)
DJ46_3812	PWY-622	starch biosynthesis
DJ46_3812	PWY-6981	chitin biosynthesis
DJ46_3812	PWY-6992	1,5-anhydrofructose degradation
DJ46_3812	PWY-7238	sucrose biosynthesis II
DJ46_3812	PWY-7347	sucrose biosynthesis III
DJ46_3812	PWY-7385	1,3-propanediol biosynthesis (engineered)
DJ46_382	PWY-6654	phosphopantothenate biosynthesis III
DJ46_3821	PWY-6854	ethylene biosynthesis III (microbes)
DJ46_3833	PWY-3801	sucrose degradation II (sucrose synthase)
DJ46_3833	PWY-6527	stachyose degradation
DJ46_3833	PWY-7238	sucrose biosynthesis II
DJ46_3833	PWY-7343	UDP-glucose biosynthesis
DJ46_3833	PWY-7817	DJ46_3833
DJ46_3834	PWY-6749	CMP-legionaminate biosynthesis I
DJ46_384	PWY-5155	&beta;-alanine biosynthesis III
DJ46_3841	PWY-101	photosynthesis light reactions
DJ46_3850	PWY-2941	L-lysine biosynthesis II
DJ46_3850	PWY-5097	L-lysine biosynthesis VI
DJ46_3873	PWY-5484	glycolysis II (from fructose 6-phosphate)
DJ46_3883	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
DJ46_3883	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
DJ46_3892	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
DJ46_3912	PWY-5481	pyruvate fermentation to lactate
DJ46_3912	PWY-6901	superpathway of glucose and xylose degradation
DJ46_392	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
DJ46_392	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
DJ46_392	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
DJ46_392	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
DJ46_3921	PWY-1361	benzoyl-CoA degradation I (aerobic)
DJ46_3921	PWY-5109	2-methylbutanoate biosynthesis
DJ46_3921	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
DJ46_3921	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
DJ46_3921	PWY-5177	glutaryl-CoA degradation
DJ46_3921	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
DJ46_3921	PWY-6435	4-hydroxybenzoate biosynthesis V
DJ46_3921	PWY-6583	pyruvate fermentation to butanol I
DJ46_3921	PWY-6863	pyruvate fermentation to hexanol
DJ46_3921	PWY-6883	pyruvate fermentation to butanol II
DJ46_3921	PWY-6944	androstenedione degradation
DJ46_3921	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
DJ46_3921	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
DJ46_3921	PWY-7007	methyl ketone biosynthesis
DJ46_3921	PWY-7046	4-coumarate degradation (anaerobic)
DJ46_3921	PWY-7094	fatty acid salvage
DJ46_3921	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
DJ46_3921	PWY-735	jasmonic acid biosynthesis
DJ46_3921	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
DJ46_3921	PWY-7606	docosahexaenoate biosynthesis III (mammals)
DJ46_3921	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
DJ46_3921	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
DJ46_3921	PWY-7726	DJ46_3921
DJ46_3921	PWY-7778	DJ46_3921
DJ46_3921	PWY-7779	DJ46_3921
DJ46_3924	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
DJ46_3924	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
DJ46_3983	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
DJ46_3983	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
DJ46_3983	PWY-7953	DJ46_3983
DJ46_4029	PWY-1042	glycolysis IV (plant cytosol)
DJ46_4029	PWY-1622	formaldehyde assimilation I (serine pathway)
DJ46_4029	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
DJ46_4029	PWY-5484	glycolysis II (from fructose 6-phosphate)
DJ46_4029	PWY-5723	Rubisco shunt
DJ46_4029	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
DJ46_4029	PWY-6886	1-butanol autotrophic biosynthesis
DJ46_4029	PWY-6901	superpathway of glucose and xylose degradation
DJ46_4029	PWY-7003	glycerol degradation to butanol
DJ46_4029	PWY-7124	ethylene biosynthesis V (engineered)
DJ46_4029	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
DJ46_4030	PWY-1042	glycolysis IV (plant cytosol)
DJ46_4030	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
DJ46_4030	PWY-5484	glycolysis II (from fructose 6-phosphate)
DJ46_4030	PWY-5723	Rubisco shunt
DJ46_4030	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
DJ46_4030	PWY-6886	1-butanol autotrophic biosynthesis
DJ46_4030	PWY-6901	superpathway of glucose and xylose degradation
DJ46_4030	PWY-7003	glycerol degradation to butanol
DJ46_4030	PWY-7124	ethylene biosynthesis V (engineered)
DJ46_4030	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
DJ46_4031	PWY-1042	glycolysis IV (plant cytosol)
DJ46_4031	PWY-5484	glycolysis II (from fructose 6-phosphate)
DJ46_4031	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
DJ46_4031	PWY-7003	glycerol degradation to butanol
DJ46_4032	PWY-1042	glycolysis IV (plant cytosol)
DJ46_4032	PWY-5484	glycolysis II (from fructose 6-phosphate)
DJ46_4032	PWY-6886	1-butanol autotrophic biosynthesis
DJ46_4032	PWY-6901	superpathway of glucose and xylose degradation
DJ46_4032	PWY-7003	glycerol degradation to butanol
DJ46_4033	PWY-1042	glycolysis IV (plant cytosol)
DJ46_4033	PWY-5484	glycolysis II (from fructose 6-phosphate)
DJ46_4033	PWY-6901	superpathway of glucose and xylose degradation
DJ46_4033	PWY-7003	glycerol degradation to butanol
DJ46_4055	PWY-7805	DJ46_4055
DJ46_4055	PWY-7807	DJ46_4055
DJ46_409	PWY-7799	DJ46_409
DJ46_409	PWY-7800	DJ46_409
DJ46_4093	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
DJ46_4093	PWY-7820	DJ46_4093
DJ46_4094	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
DJ46_4094	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
DJ46_4094	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
DJ46_4105	PWY-6834	spermidine biosynthesis III
DJ46_4121	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
DJ46_4125	PWY-7511	protein ubiquitylation
DJ46_4159	PWY-3821	galactose degradation III
DJ46_4159	PWY-6317	galactose degradation I (Leloir pathway)
DJ46_4159	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
DJ46_4159	PWY-6527	stachyose degradation
DJ46_4159	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
DJ46_4159	PWY-7344	UDP-D-galactose biosynthesis
DJ46_4161	PWY-5971	palmitate biosynthesis II (bacteria and plants)
DJ46_4161	PWY-5973	<i>cis</i>-vaccenate biosynthesis
DJ46_4161	PWY-5989	stearate biosynthesis II (bacteria and plants)
DJ46_4161	PWY-5994	palmitate biosynthesis I (animals and fungi)
DJ46_4161	PWY-6113	superpathway of mycolate biosynthesis
DJ46_4161	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
DJ46_4161	PWY-6519	8-amino-7-oxononanoate biosynthesis I
DJ46_4161	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
DJ46_4161	PWY-7663	gondoate biosynthesis (anaerobic)
DJ46_4161	PWY-7664	oleate biosynthesis IV (anaerobic)
DJ46_4161	PWY-7858	DJ46_4161
DJ46_4161	PWYG-321	mycolate biosynthesis
DJ46_4166	PWY-7651	heparan sulfate degradation
DJ46_4181	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
DJ46_4181	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
DJ46_4181	PWY-7953	DJ46_4181
DJ46_4200	PWY-7980	DJ46_4200
DJ46_4202	PWY-7980	DJ46_4202
DJ46_4209	PWY-7183	pyrimidine nucleobases salvage I
DJ46_4210	PWY-1622	formaldehyde assimilation I (serine pathway)
DJ46_4210	PWY-181	photorespiration
DJ46_4210	PWY-2161	folate polyglutamylation
DJ46_4210	PWY-2201	folate transformations I
DJ46_4210	PWY-3661	glycine betaine degradation I
DJ46_4210	PWY-3661-1	glycine betaine degradation II (mammalian)
DJ46_4210	PWY-3841	folate transformations II
DJ46_4210	PWY-5497	purine nucleobases degradation II (anaerobic)
DJ46_4224	PWY-7199	pyrimidine deoxyribonucleosides salvage
DJ46_4226	PWY-7980	DJ46_4226
DJ46_4227	PWY-5484	glycolysis II (from fructose 6-phosphate)
DJ46_4228	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
DJ46_4228	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
DJ46_4228	PWY-7953	DJ46_4228
DJ46_4229	PWY-1042	glycolysis IV (plant cytosol)
DJ46_4229	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
DJ46_4229	PWY-5484	glycolysis II (from fructose 6-phosphate)
DJ46_4229	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
DJ46_4229	PWY-7385	1,3-propanediol biosynthesis (engineered)
DJ46_4232	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
DJ46_4232	PWY-7177	UTP and CTP dephosphorylation II
DJ46_4232	PWY-7185	UTP and CTP dephosphorylation I
DJ46_4237	PWY-1361	benzoyl-CoA degradation I (aerobic)
DJ46_4237	PWY-5109	2-methylbutanoate biosynthesis
DJ46_4237	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
DJ46_4237	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
DJ46_4237	PWY-5177	glutaryl-CoA degradation
DJ46_4237	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
DJ46_4237	PWY-6435	4-hydroxybenzoate biosynthesis V
DJ46_4237	PWY-6583	pyruvate fermentation to butanol I
DJ46_4237	PWY-6863	pyruvate fermentation to hexanol
DJ46_4237	PWY-6883	pyruvate fermentation to butanol II
DJ46_4237	PWY-6944	androstenedione degradation
DJ46_4237	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
DJ46_4237	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
DJ46_4237	PWY-7007	methyl ketone biosynthesis
DJ46_4237	PWY-7046	4-coumarate degradation (anaerobic)
DJ46_4237	PWY-7094	fatty acid salvage
DJ46_4237	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
DJ46_4237	PWY-735	jasmonic acid biosynthesis
DJ46_4237	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
DJ46_4237	PWY-7606	docosahexaenoate biosynthesis III (mammals)
DJ46_4237	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
DJ46_4237	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
DJ46_4237	PWY-7726	DJ46_4237
DJ46_4237	PWY-7778	DJ46_4237
DJ46_4237	PWY-7779	DJ46_4237
DJ46_4250	PWY-7799	DJ46_4250
DJ46_4250	PWY-7800	DJ46_4250
DJ46_4264	PWY-40	putrescine biosynthesis I
DJ46_4264	PWY-6305	putrescine biosynthesis IV
DJ46_4269	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
DJ46_4269	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
DJ46_4269	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
DJ46_4269	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
DJ46_4282	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
DJ46_4282	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
DJ46_4283	PWY-1281	sulfoacetaldehyde degradation I
DJ46_4283	PWY-5482	pyruvate fermentation to acetate II
DJ46_4283	PWY-5485	pyruvate fermentation to acetate IV
DJ46_4283	PWY-5497	purine nucleobases degradation II (anaerobic)
DJ46_4283	PWY-6637	sulfolactate degradation II
DJ46_4285	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
DJ46_4285	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
DJ46_4310	PWY-6910	hydroxymethylpyrimidine salvage
DJ46_4310	PWY-7356	thiamin salvage IV (yeast)
DJ46_4310	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
DJ46_4316	PWY-7815	DJ46_4316
DJ46_4316	PWY-7816	DJ46_4316
DJ46_4316	PWY-7819	DJ46_4316
DJ46_4343	PWY-6854	ethylene biosynthesis III (microbes)
DJ46_4347	PWY-3821	galactose degradation III
DJ46_4347	PWY-6317	galactose degradation I (Leloir pathway)
DJ46_4347	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
DJ46_4347	PWY-6527	stachyose degradation
DJ46_4347	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
DJ46_4347	PWY-7344	UDP-D-galactose biosynthesis
DJ46_4367	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
DJ46_4370	PWY-7805	DJ46_4370
DJ46_4370	PWY-7807	DJ46_4370
DJ46_4400	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
DJ46_4400	PWY-6596	adenosine nucleotides degradation I
DJ46_4400	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
DJ46_4401	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
DJ46_4401	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
DJ46_4402	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
DJ46_4403	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
DJ46_4404	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
DJ46_4422	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
DJ46_4422	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
DJ46_4422	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
DJ46_4422	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
DJ46_4422	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
DJ46_4422	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
DJ46_4437	PWY-7560	methylerythritol phosphate pathway II
DJ46_4441	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
DJ46_4443	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
DJ46_4458	PWY-6599	guanine and guanosine salvage II
DJ46_4458	PWY-6609	adenine and adenosine salvage III
DJ46_4458	PWY-6610	adenine and adenosine salvage IV
DJ46_4458	PWY-6620	guanine and guanosine salvage
DJ46_4460	PWY-3961	phosphopantothenate biosynthesis II
DJ46_4462	PWY-6936	seleno-amino acid biosynthesis
DJ46_4463	PWY-5958	acridone alkaloid biosynthesis
DJ46_4463	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
DJ46_4463	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
DJ46_4464	PWY-5958	acridone alkaloid biosynthesis
DJ46_4464	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
DJ46_4464	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
DJ46_4466	PWY-6614	tetrahydrofolate biosynthesis
DJ46_4467	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
DJ46_4467	PWY-6148	tetrahydromethanopterin biosynthesis
DJ46_4467	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
DJ46_4467	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
DJ46_4468	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
DJ46_4468	PWY-6148	tetrahydromethanopterin biosynthesis
DJ46_4468	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
DJ46_4468	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
DJ46_4468	PWY-7852	DJ46_4468
DJ46_4468	PWY-7853	DJ46_4468
DJ46_4482	PWY-7560	methylerythritol phosphate pathway II
DJ46_4483	PWY-7560	methylerythritol phosphate pathway II
DJ46_4484	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
DJ46_4485	PWY-6936	seleno-amino acid biosynthesis
DJ46_4485	PWY-7274	D-cycloserine biosynthesis
DJ46_4485	PWY-7870	DJ46_4485
DJ46_4527	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
DJ46_4528	PWY-7799	DJ46_4528
DJ46_4528	PWY-7800	DJ46_4528
DJ46_4542	PWY-7883	DJ46_4542
DJ46_4563	PWY-31	canavanine degradation
DJ46_4563	PWY-4984	urea cycle
DJ46_4563	PWY-6305	putrescine biosynthesis IV
DJ46_4563	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
DJ46_4566	PWY-6749	CMP-legionaminate biosynthesis I
DJ46_4567	PWY-6749	CMP-legionaminate biosynthesis I
DJ46_4571	PWY-4261	glycerol degradation I
DJ46_4606	PWY-3341	L-proline biosynthesis III
DJ46_4606	PWY-4981	L-proline biosynthesis II (from arginine)
DJ46_4606	PWY-6344	L-ornithine degradation II (Stickland reaction)
DJ46_4650	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
DJ46_4650	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
DJ46_4650	PWY-7953	DJ46_4650
DJ46_4651	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
DJ46_4651	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
DJ46_4651	PWY-7953	DJ46_4651
DJ46_4652	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
DJ46_4652	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
DJ46_4652	PWY-7953	DJ46_4652
DJ46_4656	PWY-6012	acyl carrier protein metabolism I
DJ46_4656	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
DJ46_4656	PWY-6289	petrobactin biosynthesis
DJ46_4658	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
DJ46_4692	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
DJ46_4715	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
DJ46_4724	PWY-6123	inosine-5'-phosphate biosynthesis I
DJ46_4724	PWY-7234	inosine-5'-phosphate biosynthesis III
DJ46_4726	PWY-6123	inosine-5'-phosphate biosynthesis I
DJ46_4726	PWY-6124	inosine-5'-phosphate biosynthesis II
DJ46_4726	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
DJ46_4726	PWY-7234	inosine-5'-phosphate biosynthesis III
DJ46_4727	PWY-6123	inosine-5'-phosphate biosynthesis I
DJ46_4727	PWY-6124	inosine-5'-phosphate biosynthesis II
DJ46_4727	PWY-7234	inosine-5'-phosphate biosynthesis III
DJ46_4728	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
DJ46_4728	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
DJ46_4728	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
DJ46_4729	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
DJ46_4729	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
DJ46_4729	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
DJ46_4730	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
DJ46_4730	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
DJ46_4730	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
DJ46_4731	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
DJ46_4731	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
DJ46_4731	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
DJ46_4731	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
DJ46_4732	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
DJ46_4732	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
DJ46_4732	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
DJ46_4734	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
DJ46_4734	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
DJ46_4735	PWY-6123	inosine-5'-phosphate biosynthesis I
DJ46_4735	PWY-6124	inosine-5'-phosphate biosynthesis II
DJ46_4735	PWY-7234	inosine-5'-phosphate biosynthesis III
DJ46_4736	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
DJ46_4736	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
DJ46_4736	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
DJ46_4745	PWY-6853	ethylene biosynthesis II (microbes)
DJ46_4758	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
DJ46_4783	PWY-6754	<i>S</i>-methyl-5'-thioadenosine degradation I
DJ46_4784	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
DJ46_4784	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
DJ46_4789	PWY-101	photosynthesis light reactions
DJ46_4799	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
DJ46_4799	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
DJ46_4799	PWY-7717	DJ46_4799
DJ46_4799	PWY-7733	DJ46_4799
DJ46_4799	PWY-7734	DJ46_4799
DJ46_4799	PWY-7765	DJ46_4799
DJ46_48	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
DJ46_48	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
DJ46_48	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
DJ46_4815	PWY-6897	thiamin salvage II
DJ46_4815	PWY-7356	thiamin salvage IV (yeast)
DJ46_4815	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
DJ46_4816	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
DJ46_4816	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
DJ46_4816	PWY-6897	thiamin salvage II
DJ46_4816	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
DJ46_4816	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
DJ46_4816	PWY-7356	thiamin salvage IV (yeast)
DJ46_4816	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
DJ46_4824	PWY-6855	chitin degradation I (archaea)
DJ46_4824	PWY-6902	chitin degradation II
DJ46_4824	PWY-7822	DJ46_4824
DJ46_4864	PWY-5392	reductive TCA cycle II
DJ46_4864	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
DJ46_4864	PWY-5690	TCA cycle II (plants and fungi)
DJ46_4864	PWY-5913	TCA cycle VI (obligate autotrophs)
DJ46_4864	PWY-6728	methylaspartate cycle
DJ46_4864	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
DJ46_4864	PWY-7254	TCA cycle VII (acetate-producers)
DJ46_4864	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
DJ46_4925	PWY-7883	DJ46_4925
DJ46_4933	PWY-7511	protein ubiquitylation
DJ46_4947	PWY-5480	pyruvate fermentation to ethanol I
DJ46_4947	PWY-5485	pyruvate fermentation to acetate IV
DJ46_4947	PWY-5493	reductive monocarboxylic acid cycle
DJ46_4949	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
DJ46_4949	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
DJ46_4949	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
DJ46_4949	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
DJ46_4949	PWY-7817	DJ46_4949
DJ46_4969	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
DJ46_5000	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
DJ46_5000	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
DJ46_5000	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
DJ46_5000	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
DJ46_5003	PWY-6700	queuosine biosynthesis
DJ46_501	PWY-7980	DJ46_501
DJ46_5047	PWY-1881	formate oxidation to CO<sub>2</sub>
DJ46_5047	PWY-5497	purine nucleobases degradation II (anaerobic)
DJ46_5047	PWY-6696	oxalate degradation III
DJ46_5047	PWY-7985	DJ46_5047
DJ46_5055	PWY-5381	pyridine nucleotide cycling (plants)
DJ46_5067	PWY-5392	reductive TCA cycle II
DJ46_5067	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
DJ46_5067	PWY-5690	TCA cycle II (plants and fungi)
DJ46_5067	PWY-5913	TCA cycle VI (obligate autotrophs)
DJ46_5067	PWY-6728	methylaspartate cycle
DJ46_5067	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
DJ46_5067	PWY-7254	TCA cycle VII (acetate-producers)
DJ46_5067	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
DJ46_5129	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
DJ46_5129	PWY-5723	Rubisco shunt
DJ46_5135	PWY-7782	DJ46_5135
DJ46_5135	PWY-7783	DJ46_5135
DJ46_5137	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
DJ46_5141	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
DJ46_5160	PWY-3781	aerobic respiration I (cytochrome c)
DJ46_5160	PWY-4521	arsenite oxidation I (respiratory)
DJ46_5160	PWY-6692	Fe(II) oxidation
DJ46_5160	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
DJ46_52	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
DJ46_52	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
DJ46_52	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
DJ46_52	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
DJ46_5205	PWY-6899	base-degraded thiamin salvage
DJ46_5205	PWY-7356	thiamin salvage IV (yeast)
DJ46_5209	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
DJ46_5209	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
DJ46_5209	PWY-6897	thiamin salvage II
DJ46_5209	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
DJ46_5209	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
DJ46_5209	PWY-7356	thiamin salvage IV (yeast)
DJ46_5209	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
DJ46_5210	PWY-7396	butanol and isobutanol biosynthesis (engineered)
DJ46_5210	PWY-7806	DJ46_5210
DJ46_5212	PWY-6891	thiazole biosynthesis II (Bacillus)
DJ46_5212	PWY-6892	thiazole biosynthesis I (E. coli)
DJ46_5213	PWY-6891	thiazole biosynthesis II (Bacillus)
DJ46_5213	PWY-6892	thiazole biosynthesis I (E. coli)
DJ46_5214	PWY-6910	hydroxymethylpyrimidine salvage
DJ46_5214	PWY-7356	thiamin salvage IV (yeast)
DJ46_5214	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
DJ46_5247	PWY-6483	ceramide degradation
DJ46_5247	PWY-7119	sphingolipid recycling and degradation (yeast)
DJ46_5287	PWY-7511	protein ubiquitylation
DJ46_53	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
DJ46_53	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
DJ46_53	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
DJ46_53	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
DJ46_5312	PWY-7352	daunorubicin biosynthesis
DJ46_5312	PWY-7354	aclacinomycin biosynthesis
DJ46_5321	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
DJ46_5321	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
DJ46_5338	PWY-5101	L-isoleucine biosynthesis II
DJ46_5338	PWY-5103	L-isoleucine biosynthesis III
DJ46_5338	PWY-5104	L-isoleucine biosynthesis IV
DJ46_5338	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
DJ46_5338	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
DJ46_5338	PWY-6389	(<i>S</i>)-acetoin biosynthesis
DJ46_5338	PWY-7111	pyruvate fermentation to isobutanol (engineered)
DJ46_5339	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
DJ46_5421	PWY-5669	phosphatidylethanolamine biosynthesis I
DJ46_5482	PWY-4261	glycerol degradation I
DJ46_5483	PWY-4261	glycerol degradation I
DJ46_5483	PWY-6118	glycerol-3-phosphate shuttle
DJ46_5483	PWY-6952	glycerophosphodiester degradation
DJ46_5488	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
DJ46_5488	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
DJ46_5488	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
DJ46_5488	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
DJ46_5522	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
DJ46_5522	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
DJ46_5522	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
DJ46_5522	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
DJ46_5523	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
DJ46_5523	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
DJ46_5523	PWY-7766	DJ46_5523
DJ46_5525	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
DJ46_5541	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
DJ46_5541	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
DJ46_5575	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
DJ46_5575	PWY-7118	chitin degradation to ethanol
DJ46_5575	PWY-7294	xylose degradation IV
DJ46_5575	PWY-7295	L-arabinose degradation IV
DJ46_5575	PWY-7854	DJ46_5575
DJ46_5576	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
DJ46_5595	PWY-3341	L-proline biosynthesis III
DJ46_5595	PWY-4981	L-proline biosynthesis II (from arginine)
DJ46_5595	PWY-6344	L-ornithine degradation II (Stickland reaction)
DJ46_5595	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
DJ46_5697	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
DJ46_5697	PWY-7820	DJ46_5697
DJ46_5699	PWY-3801	sucrose degradation II (sucrose synthase)
DJ46_5699	PWY-6527	stachyose degradation
DJ46_5699	PWY-7238	sucrose biosynthesis II
DJ46_5699	PWY-7343	UDP-glucose biosynthesis
DJ46_5699	PWY-7817	DJ46_5699
DJ46_581	PWY-5392	reductive TCA cycle II
DJ46_581	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
DJ46_581	PWY-5690	TCA cycle II (plants and fungi)
DJ46_581	PWY-5913	TCA cycle VI (obligate autotrophs)
DJ46_581	PWY-6728	methylaspartate cycle
DJ46_581	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
DJ46_581	PWY-7254	TCA cycle VII (acetate-producers)
DJ46_581	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
DJ46_611	PWY-5392	reductive TCA cycle II
DJ46_611	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
DJ46_611	PWY-5690	TCA cycle II (plants and fungi)
DJ46_611	PWY-5913	TCA cycle VI (obligate autotrophs)
DJ46_611	PWY-6728	methylaspartate cycle
DJ46_611	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
DJ46_611	PWY-7254	TCA cycle VII (acetate-producers)
DJ46_611	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
DJ46_621	PWY-2941	L-lysine biosynthesis II
DJ46_621	PWY-2942	L-lysine biosynthesis III
DJ46_621	PWY-5097	L-lysine biosynthesis VI
DJ46_621	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
DJ46_621	PWY-6559	spermidine biosynthesis II
DJ46_621	PWY-6562	norspermidine biosynthesis
DJ46_621	PWY-7153	grixazone biosynthesis
DJ46_621	PWY-7977	DJ46_621
DJ46_636	PWY-4381	fatty acid biosynthesis initiation I
DJ46_64	PWY-3221	dTDP-L-rhamnose biosynthesis II
DJ46_64	PWY-6808	dTDP-D-forosamine biosynthesis
DJ46_64	PWY-6942	dTDP-D-desosamine biosynthesis
DJ46_64	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
DJ46_64	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
DJ46_64	PWY-6974	dTDP-L-olivose biosynthesis
DJ46_64	PWY-6976	dTDP-L-mycarose biosynthesis
DJ46_64	PWY-7104	dTDP-L-megosamine biosynthesis
DJ46_64	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
DJ46_64	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
DJ46_64	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
DJ46_64	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
DJ46_64	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
DJ46_64	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
DJ46_64	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
DJ46_64	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
DJ46_64	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
DJ46_64	PWY-7688	DJ46_64
DJ46_64	PWY-7814	DJ46_64
DJ46_642	PWY-6936	seleno-amino acid biosynthesis
DJ46_658	PWY-5057	L-valine degradation II
DJ46_658	PWY-5076	L-leucine degradation III
DJ46_658	PWY-5078	L-isoleucine degradation II
DJ46_658	PWY-5101	L-isoleucine biosynthesis II
DJ46_658	PWY-5103	L-isoleucine biosynthesis III
DJ46_658	PWY-5104	L-isoleucine biosynthesis IV
DJ46_658	PWY-5108	L-isoleucine biosynthesis V
DJ46_658	PWY-7767	DJ46_658
DJ46_659	PWY-5101	L-isoleucine biosynthesis II
DJ46_659	PWY-5103	L-isoleucine biosynthesis III
DJ46_659	PWY-5104	L-isoleucine biosynthesis IV
DJ46_659	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
DJ46_659	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
DJ46_659	PWY-6389	(<i>S</i>)-acetoin biosynthesis
DJ46_659	PWY-7111	pyruvate fermentation to isobutanol (engineered)
DJ46_66	PWY-5971	palmitate biosynthesis II (bacteria and plants)
DJ46_66	PWY-5973	<i>cis</i>-vaccenate biosynthesis
DJ46_66	PWY-5989	stearate biosynthesis II (bacteria and plants)
DJ46_66	PWY-6113	superpathway of mycolate biosynthesis
DJ46_66	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
DJ46_66	PWY-6519	8-amino-7-oxononanoate biosynthesis I
DJ46_66	PWY-7663	gondoate biosynthesis (anaerobic)
DJ46_66	PWY-7664	oleate biosynthesis IV (anaerobic)
DJ46_66	PWY-7858	DJ46_66
DJ46_66	PWYG-321	mycolate biosynthesis
DJ46_661	PWY-5103	L-isoleucine biosynthesis III
DJ46_661	PWY-7111	pyruvate fermentation to isobutanol (engineered)
DJ46_662	PWY-5101	L-isoleucine biosynthesis II
DJ46_662	PWY-5103	L-isoleucine biosynthesis III
DJ46_662	PWY-5104	L-isoleucine biosynthesis IV
DJ46_662	PWY-7111	pyruvate fermentation to isobutanol (engineered)
DJ46_692	PWY-6654	phosphopantothenate biosynthesis III
DJ46_701	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
DJ46_703	PWY-7181	pyrimidine deoxyribonucleosides degradation
DJ46_704	PWY-6556	pyrimidine ribonucleosides salvage II
DJ46_704	PWY-7181	pyrimidine deoxyribonucleosides degradation
DJ46_704	PWY-7193	pyrimidine ribonucleosides salvage I
DJ46_704	PWY-7199	pyrimidine deoxyribonucleosides salvage
DJ46_730	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
DJ46_732	PWY-5481	pyruvate fermentation to lactate
DJ46_732	PWY-6901	superpathway of glucose and xylose degradation
DJ46_737	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
DJ46_739	PWY-4381	fatty acid biosynthesis initiation I
DJ46_772	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
DJ46_772	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
DJ46_775	PWY-702	L-methionine biosynthesis II
DJ46_80	PWY-5958	acridone alkaloid biosynthesis
DJ46_80	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
DJ46_80	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
DJ46_81	PWY-5958	acridone alkaloid biosynthesis
DJ46_81	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
DJ46_81	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
DJ46_829	PWY-0	putrescine degradation III
DJ46_829	PWY-6117	spermine and spermidine degradation I
DJ46_829	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
DJ46_875	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
DJ46_882	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
DJ46_909	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
DJ46_909	PWY-2161	folate polyglutamylation
DJ46_909	PWY-2201	folate transformations I
DJ46_909	PWY-3841	folate transformations II
DJ46_927	PWY-6748	nitrate reduction VII (denitrification)
DJ46_928	PWY-6748	nitrate reduction VII (denitrification)
DJ46_935	PWY-6823	molybdenum cofactor biosynthesis
DJ46_937	PWY-6823	molybdenum cofactor biosynthesis
DJ46_938	PWY-6823	molybdenum cofactor biosynthesis
DJ46_938	PWY-7887	DJ46_938
DJ46_943	PWY-5194	siroheme biosynthesis
DJ46_943	PWY-5196	factor 430 biosynthesis
DJ46_943	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
DJ46_944	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
DJ46_945	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
DJ46_945	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
DJ46_945	PWY-5194	siroheme biosynthesis
DJ46_945	PWY-5196	factor 430 biosynthesis
DJ46_945	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
DJ46_947	PWY-6683	sulfate reduction III (assimilatory)
DJ46_99	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
