DJ46_100 SM00861 Transketolase, pyrimidine binding domain DJ46_1008 SM00448 cheY-homologous receiver domain DJ46_1008 SM00862 Transcriptional regulatory protein, C terminal DJ46_1009 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ46_1009 SM00387 Histidine kinase-like ATPases DJ46_1009 SM00388 His Kinase A (phosphoacceptor) domain DJ46_101 SM00530 Helix-turn-helix XRE-family like proteins DJ46_1026 SM00382 ATPases associated with a variety of cellular activities DJ46_1038 SM00563 Phosphate acyltransferases DJ46_1060 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DJ46_1061 SM00421 helix_turn_helix, Lux Regulon DJ46_1061 SM00448 cheY-homologous receiver domain DJ46_1064 SM00829 Enoylreductase DJ46_1078 SM00382 ATPases associated with a variety of cellular activities DJ46_1086 SM01091 Transporter associated domain DJ46_1089 SM00387 Histidine kinase-like ATPases DJ46_1089 SM00388 His Kinase A (phosphoacceptor) domain DJ46_1092 SM00882 Coenzyme A transferase DJ46_1093 SM00882 Coenzyme A transferase DJ46_1096 SM00382 ATPases associated with a variety of cellular activities DJ46_1104 SM00219 Tyrosine kinase, catalytic domain DJ46_1107 SM00014 Acid phosphatase homologues DJ46_1109 SM00860 SMI1 / KNR4 family DJ46_1114 SM00530 Helix-turn-helix XRE-family like proteins DJ46_1125 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. DJ46_1154 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DJ46_1161 SM00823 Phosphopantetheine attachment site DJ46_1161 SM00824 Thioesterase DJ46_1162 SM00923 MbtH-like protein DJ46_1166 SM00411 bacterial (prokaryotic) histone like domain DJ46_1174 SM00363 S4 RNA-binding domain DJ46_1175 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DJ46_1189 SM00849 Metallo-beta-lactamase superfamily DJ46_119 SM00530 Helix-turn-helix XRE-family like proteins DJ46_1195 SM00849 Metallo-beta-lactamase superfamily DJ46_1199 SM01059 Chloramphenicol acetyltransferase DJ46_1204 SM00530 Helix-turn-helix XRE-family like proteins DJ46_1212 SM00357 Cold shock protein domain DJ46_122 SM00382 ATPases associated with a variety of cellular activities DJ46_1225 SM00859 Semialdehyde dehydrogenase, NAD binding domain DJ46_1232 SM00382 ATPases associated with a variety of cellular activities DJ46_1233 SM00382 ATPases associated with a variety of cellular activities DJ46_1235 SM00646 DJ46_1235 DJ46_1237 SM00530 Helix-turn-helix XRE-family like proteins DJ46_1253 SM01207 DJ46_1253 DJ46_1257 SM00849 Metallo-beta-lactamase superfamily DJ46_126 SM00014 Acid phosphatase homologues DJ46_1260 SM00487 DEAD-like helicases superfamily DJ46_1260 SM00490 helicase superfamily c-terminal domain DJ46_1265 SM00382 ATPases associated with a variety of cellular activities DJ46_1270 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ46_1271 SM00855 Phosphoglycerate mutase family DJ46_1288 SM00014 Acid phosphatase homologues DJ46_1289 SM00354 helix_turn _helix lactose operon repressor DJ46_1305 SM00530 Helix-turn-helix XRE-family like proteins DJ46_1310 SM00646 DJ46_1310 DJ46_1314 SM00382 ATPases associated with a variety of cellular activities DJ46_1316 SM00052 Putative diguanylate phosphodiesterase DJ46_1316 SM00091 PAS domain DJ46_1316 SM00267 diguanylate cyclase DJ46_1318 SM00860 SMI1 / KNR4 family DJ46_1320 SM00450 Rhodanese Homology Domain DJ46_1320 SM00849 Metallo-beta-lactamase superfamily DJ46_1323 SM00382 ATPases associated with a variety of cellular activities DJ46_1329 SM00878 Biotin carboxylase C-terminal domain DJ46_1341 SM00387 Histidine kinase-like ATPases DJ46_1341 SM00388 His Kinase A (phosphoacceptor) domain DJ46_1342 SM00448 cheY-homologous receiver domain DJ46_1342 SM00862 Transcriptional regulatory protein, C terminal DJ46_1354 SM00382 ATPases associated with a variety of cellular activities DJ46_1358 SM00422 helix_turn_helix, mercury resistance DJ46_1358 SM00871 Bacterial transcription activator, effector binding domain DJ46_136 SM00448 cheY-homologous receiver domain DJ46_136 SM00862 Transcriptional regulatory protein, C terminal DJ46_1364 SM00342 helix_turn_helix, arabinose operon control protein DJ46_1367 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ46_137 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ46_137 SM00387 Histidine kinase-like ATPases DJ46_137 SM00388 His Kinase A (phosphoacceptor) domain DJ46_1378 SM00448 cheY-homologous receiver domain DJ46_1378 SM00862 Transcriptional regulatory protein, C terminal DJ46_138 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ46_138 SM00895 DJ46_138 DJ46_1380 SM00387 Histidine kinase-like ATPases DJ46_1382 SM00382 ATPases associated with a variety of cellular activities DJ46_1385 SM00382 ATPases associated with a variety of cellular activities DJ46_1392 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ46_1393 SM01209 DJ46_1393 DJ46_1419 SM00091 PAS domain DJ46_1419 SM00387 Histidine kinase-like ATPases DJ46_1419 SM00388 His Kinase A (phosphoacceptor) domain DJ46_1424 SM00382 ATPases associated with a variety of cellular activities DJ46_1427 SM00387 Histidine kinase-like ATPases DJ46_1427 SM00388 His Kinase A (phosphoacceptor) domain DJ46_1430 SM00829 Enoylreductase DJ46_1431 SM00740 DJ46_1431 DJ46_1443 SM00422 helix_turn_helix, mercury resistance DJ46_1452 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ46_1463 SM00480 DNA polymerase III beta subunit DJ46_1486 SM00465 GIY-YIG type nucleases (URI domain) DJ46_1507 SM00642 Alpha-amylase domain DJ46_1511 SM00871 Bacterial transcription activator, effector binding domain DJ46_1515 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ46_153 SM00822 DJ46_153 DJ46_1538 SM00382 ATPases associated with a variety of cellular activities DJ46_1542 SM00420 helix_turn_helix, Deoxyribose operon repressor DJ46_1542 SM01134 DJ46_1542 DJ46_1552 SM00861 Transketolase, pyrimidine binding domain DJ46_1563 SM00116 Domain in cystathionine beta-synthase and other proteins. DJ46_1563 SM00382 ATPases associated with a variety of cellular activities DJ46_1570 SM00060 Fibronectin type 3 domain DJ46_1570 SM00495 Chitin-binding domain type 3 DJ46_1579 SM00849 Metallo-beta-lactamase superfamily DJ46_1593 SM00341 Helicase and RNase D C-terminal DJ46_1593 SM00487 DEAD-like helicases superfamily DJ46_1593 SM00490 helicase superfamily c-terminal domain DJ46_1593 SM00956 DJ46_1593 DJ46_1601 SM01131 DJ46_1601 DJ46_1607 SM01130 DJ46_1607 DJ46_1611 SM00091 PAS domain DJ46_1611 SM00382 ATPases associated with a variety of cellular activities DJ46_1624 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DJ46_1632 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DJ46_1633 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ46_1633 SM00387 Histidine kinase-like ATPases DJ46_1633 SM00388 His Kinase A (phosphoacceptor) domain DJ46_1634 SM00448 cheY-homologous receiver domain DJ46_1634 SM00862 Transcriptional regulatory protein, C terminal DJ46_1673 SM00382 ATPases associated with a variety of cellular activities DJ46_1675 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ46_168 SM00420 helix_turn_helix, Deoxyribose operon repressor DJ46_168 SM01134 DJ46_168 DJ46_1686 SM00062 Bacterial periplasmic substrate-binding proteins DJ46_1687 SM00382 ATPases associated with a variety of cellular activities DJ46_1693 SM00028 Tetratricopeptide repeats DJ46_17 SM00382 ATPases associated with a variety of cellular activities DJ46_17 SM01086 C-terminal, D2-small domain, of ClpB protein DJ46_1711 SM00382 ATPases associated with a variety of cellular activities DJ46_172 SM00365 Leucine-rich repeat, SDS22-like subfamily DJ46_172 SM00369 Leucine-rich repeats, typical (most populated) subfamily DJ46_1721 SM00830 Chorismate mutase type II DJ46_1729 SM00287 Bacterial SH3 domain homologues DJ46_1740 SM00382 ATPases associated with a variety of cellular activities DJ46_1745 SM01133 DJ46_1745 DJ46_1751 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DJ46_1755 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase DJ46_1758 SM00346 helix_turn_helix isocitrate lyase regulation DJ46_1762 SM00098 Alkaline phosphatase homologues DJ46_1764 SM00530 Helix-turn-helix XRE-family like proteins DJ46_1769 SM00850 LytTr DNA-binding domain DJ46_178 SM00387 Histidine kinase-like ATPases DJ46_178 SM00388 His Kinase A (phosphoacceptor) domain DJ46_1789 SM01060 DJ46_1789 DJ46_179 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ46_1800 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ46_1801 SM00889 Elongation factor G, domain IV DJ46_1806 SM00382 ATPases associated with a variety of cellular activities DJ46_1807 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ46_1809 SM00382 ATPases associated with a variety of cellular activities DJ46_1814 SM00342 helix_turn_helix, arabinose operon control protein DJ46_1814 SM00871 Bacterial transcription activator, effector binding domain DJ46_1819 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ46_1824 SM00387 Histidine kinase-like ATPases DJ46_1824 SM00388 His Kinase A (phosphoacceptor) domain DJ46_1825 SM00448 cheY-homologous receiver domain DJ46_1825 SM00862 Transcriptional regulatory protein, C terminal DJ46_183 SM00387 Histidine kinase-like ATPases DJ46_183 SM00388 His Kinase A (phosphoacceptor) domain DJ46_1852 SM00797 Allophanate hydrolase subunit 2 DJ46_1853 SM00796 Allophanate hydrolase subunit 1 DJ46_1854 SM00346 helix_turn_helix isocitrate lyase regulation DJ46_1858 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DJ46_1871 SM00849 Metallo-beta-lactamase superfamily DJ46_1889 SM00870 DJ46_1889 DJ46_1890 SM00530 Helix-turn-helix XRE-family like proteins DJ46_1897 SM00919 Malic enzyme, NAD binding domain DJ46_1897 SM01274 DJ46_1897 DJ46_1903 SM00448 cheY-homologous receiver domain DJ46_1904 SM00387 Histidine kinase-like ATPases DJ46_1915 SM01060 DJ46_1915 DJ46_1942 SM00382 ATPases associated with a variety of cellular activities DJ46_1947 SM00226 Low molecular weight phosphatase family DJ46_1950 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DJ46_1953 SM00028 Tetratricopeptide repeats DJ46_1957 SM00344 helix_turn_helix ASNC type DJ46_197 SM00465 GIY-YIG type nucleases (URI domain) DJ46_197 SM00496 Intron-encoded nuclease repeat 2 DJ46_1970 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ46_1977 SM00448 cheY-homologous receiver domain DJ46_1977 SM00862 Transcriptional regulatory protein, C terminal DJ46_1978 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ46_1978 SM00387 Histidine kinase-like ATPases DJ46_1978 SM00388 His Kinase A (phosphoacceptor) domain DJ46_1989 SM00530 Helix-turn-helix XRE-family like proteins DJ46_1999 SM00382 ATPases associated with a variety of cellular activities DJ46_200 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ46_2001 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DJ46_2003 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ46_2003 SM00387 Histidine kinase-like ATPases DJ46_2003 SM00388 His Kinase A (phosphoacceptor) domain DJ46_2004 SM00448 cheY-homologous receiver domain DJ46_2004 SM00862 Transcriptional regulatory protein, C terminal DJ46_2006 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ46_201 SM00382 ATPases associated with a variety of cellular activities DJ46_2025 SM00354 helix_turn _helix lactose operon repressor DJ46_2026 SM00028 Tetratricopeptide repeats DJ46_203 SM00382 ATPases associated with a variety of cellular activities DJ46_2033 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DJ46_2033 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ46_2034 SM00319 Homologues of the ligand binding domain of Tar DJ46_2039 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins DJ46_2045 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DJ46_2053 SM00344 helix_turn_helix ASNC type DJ46_2065 SM00342 helix_turn_helix, arabinose operon control protein DJ46_2068 SM00287 Bacterial SH3 domain homologues DJ46_207 SM00344 helix_turn_helix ASNC type DJ46_2078 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ46_2083 SM00382 ATPases associated with a variety of cellular activities DJ46_2085 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DJ46_2098 SM00382 ATPases associated with a variety of cellular activities DJ46_2107 SM00530 Helix-turn-helix XRE-family like proteins DJ46_2108 SM01207 DJ46_2108 DJ46_2120 SM00382 ATPases associated with a variety of cellular activities DJ46_2123 SM00530 Helix-turn-helix XRE-family like proteins DJ46_2135 SM01266 DJ46_2135 DJ46_2137 SM00382 ATPases associated with a variety of cellular activities DJ46_2148 SM00028 Tetratricopeptide repeats DJ46_2153 SM01091 Transporter associated domain DJ46_2154 SM00422 helix_turn_helix, mercury resistance DJ46_2162 SM01350 DJ46_2162 DJ46_2163 SM00861 Transketolase, pyrimidine binding domain DJ46_2166 SM00829 Enoylreductase DJ46_2169 SM00829 Enoylreductase DJ46_2172 SM01276 DJ46_2172 DJ46_2181 SM00914 DJ46_2181 DJ46_2187 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ46_2187 SM00866 DJ46_2187 DJ46_2195 SM00849 Metallo-beta-lactamase superfamily DJ46_2208 SM00248 ankyrin repeats DJ46_2209 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DJ46_2210 SM00636 DJ46_2210 DJ46_2218 SM00871 Bacterial transcription activator, effector binding domain DJ46_2222 SM00382 ATPases associated with a variety of cellular activities DJ46_2228 SM00849 Metallo-beta-lactamase superfamily DJ46_2229 SM00641 Glycosyl hydrolases family 25 DJ46_2242 SM00849 Metallo-beta-lactamase superfamily DJ46_2243 SM00829 Enoylreductase DJ46_2268 SM00829 Enoylreductase DJ46_2269 SM00855 Phosphoglycerate mutase family DJ46_2271 SM00533 DNA-binding domain of DNA mismatch repair MUTS family DJ46_2271 SM00534 ATPase domain of DNA mismatch repair MUTS family DJ46_2273 SM00642 Alpha-amylase domain DJ46_2286 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DJ46_2287 SM00829 Enoylreductase DJ46_2289 SM00028 Tetratricopeptide repeats DJ46_23 SM00825 Beta-ketoacyl synthase DJ46_2304 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins DJ46_231 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ46_2313 SM00479 DJ46_2313 DJ46_2314 SM00357 Cold shock protein domain DJ46_2319 SM01022 DJ46_2319 DJ46_2341 SM00852 Probable molybdopterin binding domain DJ46_2344 SM00729 Elongator protein 3, MiaB family, Radical SAM DJ46_2348 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DJ46_2348 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DJ46_2369 SM00382 ATPases associated with a variety of cellular activities DJ46_2372 SM00434 DNA Topoisomerase IV DJ46_2373 SM00387 Histidine kinase-like ATPases DJ46_2373 SM00433 TopoisomeraseII DJ46_2374 SM00881 CoA binding domain DJ46_2375 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DJ46_2376 SM00448 cheY-homologous receiver domain DJ46_2376 SM00862 Transcriptional regulatory protein, C terminal DJ46_2379 SM01207 DJ46_2379 DJ46_2382 SM00257 Lysin motif DJ46_2382 SM00636 DJ46_2382 DJ46_2386 SM00479 DJ46_2386 DJ46_2389 SM00382 ATPases associated with a variety of cellular activities DJ46_2398 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DJ46_2411 SM00644 DJ46_2411 DJ46_2411 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. DJ46_2412 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain DJ46_2415 SM00091 PAS domain DJ46_2415 SM00387 Histidine kinase-like ATPases DJ46_2415 SM00388 His Kinase A (phosphoacceptor) domain DJ46_2421 SM01058 CarD-like/TRCF domain DJ46_2447 SM00644 DJ46_2447 DJ46_245 SM00917 LeuA allosteric (dimerisation) domain DJ46_2450 SM00382 ATPases associated with a variety of cellular activities DJ46_2451 SM00382 ATPases associated with a variety of cellular activities DJ46_2454 SM00861 Transketolase, pyrimidine binding domain DJ46_2458 SM00382 ATPases associated with a variety of cellular activities DJ46_2459 SM00062 Bacterial periplasmic substrate-binding proteins DJ46_246 SM01329 DJ46_246 DJ46_2463 SM00857 Resolvase, N terminal domain DJ46_2469 SM00028 Tetratricopeptide repeats DJ46_2475 SM00287 Bacterial SH3 domain homologues DJ46_2475 SM00644 DJ46_2475 DJ46_2506 SM00530 Helix-turn-helix XRE-family like proteins DJ46_2521 SM00382 ATPases associated with a variety of cellular activities DJ46_2531 SM00530 Helix-turn-helix XRE-family like proteins DJ46_2532 SM00530 Helix-turn-helix XRE-family like proteins DJ46_2537 SM01230 DJ46_2537 DJ46_2538 SM00422 helix_turn_helix, mercury resistance DJ46_2543 SM00382 ATPases associated with a variety of cellular activities DJ46_2550 SM00287 Bacterial SH3 domain homologues DJ46_2553 SM00420 helix_turn_helix, Deoxyribose operon repressor DJ46_2553 SM01134 DJ46_2553 DJ46_2560 SM00636 DJ46_2560 DJ46_2564 SM00411 bacterial (prokaryotic) histone like domain DJ46_2570 SM00382 ATPases associated with a variety of cellular activities DJ46_2576 SM00342 helix_turn_helix, arabinose operon control protein DJ46_2578 SM00478 endonuclease III DJ46_2585 SM00052 Putative diguanylate phosphodiesterase DJ46_2585 SM00091 PAS domain DJ46_2585 SM00267 diguanylate cyclase DJ46_2590 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ46_2594 SM00148 Phospholipase C, catalytic domain (part); domain X DJ46_2596 SM00257 Lysin motif DJ46_2602 SM00387 Histidine kinase-like ATPases DJ46_2602 SM00388 His Kinase A (phosphoacceptor) domain DJ46_2603 SM00448 cheY-homologous receiver domain DJ46_2603 SM00862 Transcriptional regulatory protein, C terminal DJ46_2606 SM00382 ATPases associated with a variety of cellular activities DJ46_2607 SM00853 MutL C terminal dimerisation domain DJ46_2607 SM01340 DJ46_2607 DJ46_2608 SM00533 DNA-binding domain of DNA mismatch repair MUTS family DJ46_2608 SM00534 ATPase domain of DNA mismatch repair MUTS family DJ46_2611 SM00729 Elongator protein 3, MiaB family, Radical SAM DJ46_2617 SM00322 K homology RNA-binding domain DJ46_2617 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DJ46_2619 SM00382 ATPases associated with a variety of cellular activities DJ46_2620 SM00852 Probable molybdopterin binding domain DJ46_2631 SM00382 ATPases associated with a variety of cellular activities DJ46_2633 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ46_2633 SM00866 DJ46_2633 DJ46_2634 SM00382 ATPases associated with a variety of cellular activities DJ46_2634 SM00843 DJ46_2634 DJ46_2637 SM00849 Metallo-beta-lactamase superfamily DJ46_2638 SM01130 DJ46_2638 DJ46_2640 SM00859 Semialdehyde dehydrogenase, NAD binding domain DJ46_2646 SM00316 Ribosomal protein S1-like RNA-binding domain DJ46_2646 SM00322 K homology RNA-binding domain DJ46_2647 SM01387 DJ46_2647 DJ46_2648 SM00904 Riboflavin kinase DJ46_2655 SM00316 Ribosomal protein S1-like RNA-binding domain DJ46_2655 SM00322 K homology RNA-binding domain DJ46_2657 SM00479 DJ46_2657 DJ46_2657 SM00481 DNA polymerase alpha chain like domain DJ46_2659 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DJ46_2668 SM00382 ATPases associated with a variety of cellular activities DJ46_2668 SM01086 C-terminal, D2-small domain, of ClpB protein DJ46_2672 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain DJ46_2672 SM00437 Bacterial DNA topoisomerase I DNA-binding domain DJ46_2672 SM00493 DJ46_2672 DJ46_2674 SM00881 CoA binding domain DJ46_2684 SM00382 ATPases associated with a variety of cellular activities DJ46_2684 SM00962 SRP54-type protein, GTPase domain DJ46_2684 SM00963 SRP54-type protein, helical bundle domain DJ46_2686 SM00382 ATPases associated with a variety of cellular activities DJ46_2686 SM00962 SRP54-type protein, GTPase domain DJ46_2686 SM00963 SRP54-type protein, helical bundle domain DJ46_2687 SM00968 SMC proteins Flexible Hinge Domain DJ46_2688 SM00358 Double-stranded RNA binding motif DJ46_2688 SM00535 Ribonuclease III family DJ46_2690 SM00822 DJ46_2690 DJ46_2691 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. DJ46_2694 SM00487 DEAD-like helicases superfamily DJ46_2694 SM00490 helicase superfamily c-terminal domain DJ46_2695 SM01120 DJ46_2695 DJ46_2695 SM01121 DJ46_2695 DJ46_2698 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain DJ46_2701 SM00220 Serine/Threonine protein kinases, catalytic domain DJ46_2701 SM00740 DJ46_2701 DJ46_2702 SM00331 Sigma factor PP2C-like phosphatases DJ46_2702 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain DJ46_2707 SM00487 DEAD-like helicases superfamily DJ46_2707 SM00490 helicase superfamily c-terminal domain DJ46_2709 SM01409 DJ46_2709 DJ46_2710 SM00072 Guanylate kinase homologues. DJ46_2713 SM00831 Cation transporter/ATPase, N-terminus DJ46_2722 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family DJ46_2725 SM00851 MGS-like domain DJ46_2725 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DJ46_2725 SM01209 DJ46_2725 DJ46_2726 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain DJ46_2731 SM00363 S4 RNA-binding domain DJ46_2736 SM00363 S4 RNA-binding domain DJ46_2745 SM00864 Tubulin/FtsZ family, GTPase domain DJ46_2745 SM00865 Tubulin/FtsZ family, C-terminal domain DJ46_2746 SM00842 Cell division protein FtsA DJ46_2754 SM00740 DJ46_2754 DJ46_2755 SM00740 DJ46_2755 DJ46_2761 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains DJ46_2769 SM00530 Helix-turn-helix XRE-family like proteins DJ46_2772 SM00644 DJ46_2772 DJ46_2794 SM00507 HNH nucleases DJ46_2803 SM00530 Helix-turn-helix XRE-family like proteins DJ46_2817 SM00382 ATPases associated with a variety of cellular activities DJ46_282 SM00387 Histidine kinase-like ATPases DJ46_2822 SM00530 Helix-turn-helix XRE-family like proteins DJ46_2823 SM00530 Helix-turn-helix XRE-family like proteins DJ46_2827 SM00530 Helix-turn-helix XRE-family like proteins DJ46_283 SM00421 helix_turn_helix, Lux Regulon DJ46_283 SM00448 cheY-homologous receiver domain DJ46_2833 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DJ46_2842 SM00855 Phosphoglycerate mutase family DJ46_2855 SM00878 Biotin carboxylase C-terminal domain DJ46_2859 SM00670 Large family of predicted nucleotide-binding domains DJ46_2864 SM00838 Elongation factor G C-terminus DJ46_2880 SM00861 Transketolase, pyrimidine binding domain DJ46_2886 SM00849 Metallo-beta-lactamase superfamily DJ46_2899 SM00052 Putative diguanylate phosphodiesterase DJ46_2907 SM00267 diguanylate cyclase DJ46_2916 SM00387 Histidine kinase-like ATPases DJ46_2916 SM00388 His Kinase A (phosphoacceptor) domain DJ46_2919 SM00354 helix_turn _helix lactose operon repressor DJ46_2923 SM00642 Alpha-amylase domain DJ46_2924 SM00642 Alpha-amylase domain DJ46_2925 SM00382 ATPases associated with a variety of cellular activities DJ46_2932 SM00382 ATPases associated with a variety of cellular activities DJ46_2949 SM01007 Class II Aldolase and Adducin N-terminal domain DJ46_2955 SM00267 diguanylate cyclase DJ46_2962 SM01061 CAT RNA binding domain DJ46_2964 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ46_2964 SM00866 DJ46_2964 DJ46_2967 SM00849 Metallo-beta-lactamase superfamily DJ46_2986 SM00387 Histidine kinase-like ATPases DJ46_2988 SM00936 Penicillin-binding protein 5, C-terminal domain DJ46_2989 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ46_2990 SM00382 ATPases associated with a variety of cellular activities DJ46_2993 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ46_2997 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain DJ46_3 SM01060 DJ46_3 DJ46_300 SM00091 PAS domain DJ46_300 SM00387 Histidine kinase-like ATPases DJ46_300 SM00388 His Kinase A (phosphoacceptor) domain DJ46_3016 SM00354 helix_turn _helix lactose operon repressor DJ46_3020 SM00704 CDGSH-type zinc finger. Function unknown. DJ46_3026 SM00729 Elongator protein 3, MiaB family, Radical SAM DJ46_3026 SM00876 Biotin and Thiamin Synthesis associated domain DJ46_3036 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ46_304 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ46_304 SM00387 Histidine kinase-like ATPases DJ46_304 SM00388 His Kinase A (phosphoacceptor) domain DJ46_3044 SM00859 Semialdehyde dehydrogenase, NAD binding domain DJ46_3052 SM00849 Metallo-beta-lactamase superfamily DJ46_3061 SM00382 ATPases associated with a variety of cellular activities DJ46_3063 SM00062 Bacterial periplasmic substrate-binding proteins DJ46_3063 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. DJ46_3069 SM00861 Transketolase, pyrimidine binding domain DJ46_3073 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DJ46_3075 SM00091 PAS domain DJ46_3075 SM00382 ATPases associated with a variety of cellular activities DJ46_3080 SM00448 cheY-homologous receiver domain DJ46_3081 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DJ46_3084 SM00363 S4 RNA-binding domain DJ46_3085 SM00861 Transketolase, pyrimidine binding domain DJ46_3092 SM00878 Biotin carboxylase C-terminal domain DJ46_31 SM00382 ATPases associated with a variety of cellular activities DJ46_3102 SM00382 ATPases associated with a variety of cellular activities DJ46_3106 SM00841 Elongation factor P, C-terminal DJ46_3106 SM01185 DJ46_3106 DJ46_3113 SM00529 Helix-turn-helix diphteria tox regulatory element DJ46_3117 SM00450 Rhodanese Homology Domain DJ46_3118 SM00354 helix_turn _helix lactose operon repressor DJ46_3128 SM00382 ATPases associated with a variety of cellular activities DJ46_3129 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ46_3135 SM00487 DEAD-like helicases superfamily DJ46_3135 SM00490 helicase superfamily c-terminal domain DJ46_3142 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. DJ46_3149 SM00382 ATPases associated with a variety of cellular activities DJ46_315 SM00363 S4 RNA-binding domain DJ46_3160 SM01018 B12 binding domain DJ46_3165 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DJ46_3167 SM00849 Metallo-beta-lactamase superfamily DJ46_3176 SM00382 ATPases associated with a variety of cellular activities DJ46_3189 SM00382 ATPases associated with a variety of cellular activities DJ46_319 SM00448 cheY-homologous receiver domain DJ46_319 SM00862 Transcriptional regulatory protein, C terminal DJ46_3192 SM00518 AP endonuclease family 2 DJ46_3193 SM00487 DEAD-like helicases superfamily DJ46_3193 SM00490 helicase superfamily c-terminal domain DJ46_32 SM00382 ATPases associated with a variety of cellular activities DJ46_320 SM00091 PAS domain DJ46_320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ46_320 SM00387 Histidine kinase-like ATPases DJ46_320 SM00388 His Kinase A (phosphoacceptor) domain DJ46_3200 SM00400 zinc finger DJ46_3200 SM00493 DJ46_3200 DJ46_3200 SM00766 DNA primase DnaG DnaB-binding DJ46_3202 SM00116 Domain in cystathionine beta-synthase and other proteins. DJ46_3209 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DJ46_3215 SM00729 Elongator protein 3, MiaB family, Radical SAM DJ46_3218 SM00271 DnaJ molecular chaperone homology domain DJ46_322 SM00257 Lysin motif DJ46_3222 SM00729 Elongator protein 3, MiaB family, Radical SAM DJ46_3224 SM00838 Elongation factor G C-terminus DJ46_3230 SM00849 Metallo-beta-lactamase superfamily DJ46_3232 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DJ46_3236 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DJ46_3238 SM01103 DJ46_3238 DJ46_3250 SM00954 Region found in RelA / SpoT proteins DJ46_3252 SM00098 Alkaline phosphatase homologues DJ46_3257 SM00855 Phosphoglycerate mutase family DJ46_3267 SM00530 Helix-turn-helix XRE-family like proteins DJ46_327 SM00487 DEAD-like helicases superfamily DJ46_327 SM00490 helicase superfamily c-terminal domain DJ46_3272 SM00382 ATPases associated with a variety of cellular activities DJ46_329 SM00257 Lysin motif DJ46_3291 SM00732 Likely ribonuclease with RNase H fold. DJ46_3293 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DJ46_3300 SM00028 Tetratricopeptide repeats DJ46_3304 SM00382 ATPases associated with a variety of cellular activities DJ46_331 SM00422 helix_turn_helix, mercury resistance DJ46_3311 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DJ46_3311 SM00954 Region found in RelA / SpoT proteins DJ46_3320 SM01323 DJ46_3320 DJ46_3324 SM00382 ATPases associated with a variety of cellular activities DJ46_3325 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DJ46_333 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DJ46_3330 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DJ46_3333 SM00257 Lysin motif DJ46_3343 SM00382 ATPases associated with a variety of cellular activities DJ46_3344 SM00387 Histidine kinase-like ATPases DJ46_3346 SM00448 cheY-homologous receiver domain DJ46_3346 SM00862 Transcriptional regulatory protein, C terminal DJ46_3348 SM01317 DJ46_3348 DJ46_336 SM00644 DJ46_336 DJ46_3366 SM00257 Lysin motif DJ46_3368 SM01004 Delta-aminolevulinic acid dehydratase DJ46_3373 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ46_3376 SM00382 ATPases associated with a variety of cellular activities DJ46_3376 SM00464 Found in ATP-dependent protease La (LON) DJ46_3377 SM00382 ATPases associated with a variety of cellular activities DJ46_3378 SM00382 ATPases associated with a variety of cellular activities DJ46_3378 SM00994 ClpX C4-type zinc finger DJ46_3378 SM01086 C-terminal, D2-small domain, of ClpB protein DJ46_338 SM00870 DJ46_338 DJ46_3390 SM00909 Sporulation and spore germination DJ46_3397 SM00421 helix_turn_helix, Lux Regulon DJ46_3405 SM00382 ATPases associated with a variety of cellular activities DJ46_3406 SM00382 ATPases associated with a variety of cellular activities DJ46_3408 SM00342 helix_turn_helix, arabinose operon control protein DJ46_3408 SM00448 cheY-homologous receiver domain DJ46_341 SM00316 Ribosomal protein S1-like RNA-binding domain DJ46_3412 SM00530 Helix-turn-helix XRE-family like proteins DJ46_3417 SM00382 ATPases associated with a variety of cellular activities DJ46_342 SM01240 DJ46_342 DJ46_3428 SM00465 GIY-YIG type nucleases (URI domain) DJ46_3430 SM00893 Electron transfer flavoprotein domain DJ46_3431 SM00893 Electron transfer flavoprotein domain DJ46_3444 SM00382 ATPases associated with a variety of cellular activities DJ46_3445 SM00387 Histidine kinase-like ATPases DJ46_3445 SM00388 His Kinase A (phosphoacceptor) domain DJ46_3446 SM00448 cheY-homologous receiver domain DJ46_3446 SM00862 Transcriptional regulatory protein, C terminal DJ46_3449 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase DJ46_3453 SM00382 ATPases associated with a variety of cellular activities DJ46_3456 SM00725 NEAr Transporter domain DJ46_3457 SM00725 NEAr Transporter domain DJ46_3458 SM00725 NEAr Transporter domain DJ46_3460 SM00363 S4 RNA-binding domain DJ46_3462 SM00463 Small MutS-related domain DJ46_3462 SM00533 DNA-binding domain of DNA mismatch repair MUTS family DJ46_3462 SM00534 ATPase domain of DNA mismatch repair MUTS family DJ46_3463 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DJ46_3463 SM00481 DNA polymerase alpha chain like domain DJ46_3463 SM00483 DNA polymerase X family DJ46_3471 SM00873 B3/4 domain DJ46_3471 SM00874 tRNA synthetase B5 domain DJ46_3471 SM00896 Ferredoxin-fold anticodon binding domain DJ46_3473 SM00967 RNA 2'-O ribose methyltransferase substrate binding DJ46_3488 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DJ46_3490 SM00382 ATPases associated with a variety of cellular activities DJ46_3494 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DJ46_3497 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain DJ46_3497 SM01232 DJ46_3497 DJ46_3498 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs DJ46_3498 SM00474 3'-5' exonuclease DJ46_3498 SM00475 5'-3' exonuclease DJ46_3498 SM00482 DNA polymerase A domain DJ46_3499 SM00091 PAS domain DJ46_3499 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ46_3499 SM00387 Histidine kinase-like ATPases DJ46_3499 SM00388 His Kinase A (phosphoacceptor) domain DJ46_3500 SM00448 cheY-homologous receiver domain DJ46_3500 SM00862 Transcriptional regulatory protein, C terminal DJ46_3504 SM01329 DJ46_3504 DJ46_3513 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ46_3514 SM00919 Malic enzyme, NAD binding domain DJ46_3514 SM01274 DJ46_3514 DJ46_3515 SM00481 DNA polymerase alpha chain like domain DJ46_3522 SM00116 Domain in cystathionine beta-synthase and other proteins. DJ46_3524 SM00849 Metallo-beta-lactamase superfamily DJ46_353 SM00411 bacterial (prokaryotic) histone like domain DJ46_3535 SM00530 Helix-turn-helix XRE-family like proteins DJ46_3537 SM01002 Alanine dehydrogenase/PNT, C-terminal domain DJ46_3537 SM01003 Alanine dehydrogenase/PNT, N-terminal domain DJ46_3562 SM00981 DJ46_3562 DJ46_3571 SM00363 S4 RNA-binding domain DJ46_3571 SM01390 DJ46_3571 DJ46_3574 SM00363 S4 RNA-binding domain DJ46_358 SM00562 DJ46_358 DJ46_3580 SM00116 Domain in cystathionine beta-synthase and other proteins. DJ46_3583 SM00448 cheY-homologous receiver domain DJ46_3583 SM00862 Transcriptional regulatory protein, C terminal DJ46_3584 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ46_3584 SM00387 Histidine kinase-like ATPases DJ46_3584 SM00388 His Kinase A (phosphoacceptor) domain DJ46_3585 SM00248 ankyrin repeats DJ46_3592 SM00354 helix_turn _helix lactose operon repressor DJ46_3603 SM00843 DJ46_3603 DJ46_3611 SM00849 Metallo-beta-lactamase superfamily DJ46_3615 SM00642 Alpha-amylase domain DJ46_3619 SM00420 helix_turn_helix, Deoxyribose operon repressor DJ46_362 SM00028 Tetratricopeptide repeats DJ46_3620 SM00363 S4 RNA-binding domain DJ46_3624 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DJ46_3629 SM01058 CarD-like/TRCF domain DJ46_363 SM00914 DJ46_363 DJ46_3636 SM00852 Probable molybdopterin binding domain DJ46_3639 SM00729 Elongator protein 3, MiaB family, Radical SAM DJ46_3643 SM00450 Rhodanese Homology Domain DJ46_3658 SM00382 ATPases associated with a variety of cellular activities DJ46_3662 SM00729 Elongator protein 3, MiaB family, Radical SAM DJ46_3664 SM00382 ATPases associated with a variety of cellular activities DJ46_3672 SM00014 Acid phosphatase homologues DJ46_3675 SM00852 Probable molybdopterin binding domain DJ46_3686 SM00387 Histidine kinase-like ATPases DJ46_3687 SM00387 Histidine kinase-like ATPases DJ46_3687 SM00388 His Kinase A (phosphoacceptor) domain DJ46_3694 SM00382 ATPases associated with a variety of cellular activities DJ46_3706 SM00947 Carbonic anhydrase DJ46_3707 SM01234 DJ46_3707 DJ46_3711 SM00894 Excalibur calcium-binding domain DJ46_372 SM00986 Uracil DNA glycosylase superfamily DJ46_372 SM00987 UreE urease accessory protein, C-terminal domain DJ46_3723 SM00899 DJ46_3723 DJ46_3725 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ46_3725 SM00387 Histidine kinase-like ATPases DJ46_3725 SM00388 His Kinase A (phosphoacceptor) domain DJ46_3726 SM00448 cheY-homologous receiver domain DJ46_3726 SM00862 Transcriptional regulatory protein, C terminal DJ46_3732 SM00046 Diacylglycerol kinase catalytic domain (presumed) DJ46_3742 SM00382 ATPases associated with a variety of cellular activities DJ46_3743 SM00342 helix_turn_helix, arabinose operon control protein DJ46_3743 SM00871 Bacterial transcription activator, effector binding domain DJ46_3744 SM00448 cheY-homologous receiver domain DJ46_3744 SM00862 Transcriptional regulatory protein, C terminal DJ46_3745 SM00387 Histidine kinase-like ATPases DJ46_3749 SM00382 ATPases associated with a variety of cellular activities DJ46_3754 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ46_3754 SM00866 DJ46_3754 DJ46_376 SM00851 MGS-like domain DJ46_3762 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ46_3762 SM00387 Histidine kinase-like ATPases DJ46_3762 SM00388 His Kinase A (phosphoacceptor) domain DJ46_3763 SM00448 cheY-homologous receiver domain DJ46_3763 SM00862 Transcriptional regulatory protein, C terminal DJ46_3764 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DJ46_3772 SM00357 Cold shock protein domain DJ46_3780 SM00642 Alpha-amylase domain DJ46_3814 SM00316 Ribosomal protein S1-like RNA-binding domain DJ46_3816 SM00344 helix_turn_helix ASNC type DJ46_3823 SM01298 DJ46_3823 DJ46_3843 SM00871 Bacterial transcription activator, effector binding domain DJ46_385 SM00479 DJ46_385 DJ46_385 SM00487 DEAD-like helicases superfamily DJ46_385 SM00491 DJ46_385 DJ46_3853 SM00382 ATPases associated with a variety of cellular activities DJ46_3858 SM00860 SMI1 / KNR4 family DJ46_3871 SM00420 helix_turn_helix, Deoxyribose operon repressor DJ46_3878 SM00422 helix_turn_helix, mercury resistance DJ46_3881 SM00855 Phosphoglycerate mutase family DJ46_3883 SM00729 Elongator protein 3, MiaB family, Radical SAM DJ46_3894 SM00382 ATPases associated with a variety of cellular activities DJ46_3898 SM00382 ATPases associated with a variety of cellular activities DJ46_3898 SM00930 DJ46_3898 DJ46_39 SM00155 Phospholipase D. Active site motifs. DJ46_390 SM00478 endonuclease III DJ46_390 SM00525 DJ46_390 DJ46_3901 SM00493 DJ46_3901 DJ46_3918 SM00849 Metallo-beta-lactamase superfamily DJ46_392 SM00060 Fibronectin type 3 domain DJ46_3927 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DJ46_3927 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ46_3941 SM00530 Helix-turn-helix XRE-family like proteins DJ46_3946 SM00448 cheY-homologous receiver domain DJ46_3946 SM00862 Transcriptional regulatory protein, C terminal DJ46_3947 SM00387 Histidine kinase-like ATPases DJ46_3947 SM00388 His Kinase A (phosphoacceptor) domain DJ46_3951 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DJ46_3951 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ46_3955 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ46_3975 SM01276 DJ46_3975 DJ46_3982 SM00363 S4 RNA-binding domain DJ46_3984 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain DJ46_3985 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DJ46_3995 SM00382 ATPases associated with a variety of cellular activities DJ46_3999 SM00448 cheY-homologous receiver domain DJ46_3999 SM00862 Transcriptional regulatory protein, C terminal DJ46_4001 SM00316 Ribosomal protein S1-like RNA-binding domain DJ46_4001 SM00357 Cold shock protein domain DJ46_4001 SM00955 DJ46_4001 DJ46_4029 SM01192 DJ46_4029 DJ46_4029 SM01193 DJ46_4029 DJ46_403 SM00981 DJ46_403 DJ46_4033 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DJ46_405 SM00491 DJ46_405 DJ46_4053 SM00028 Tetratricopeptide repeats DJ46_4061 SM00487 DEAD-like helicases superfamily DJ46_4061 SM00490 helicase superfamily c-terminal domain DJ46_4065 SM00422 helix_turn_helix, mercury resistance DJ46_4068 SM00530 Helix-turn-helix XRE-family like proteins DJ46_4071 SM00422 helix_turn_helix, mercury resistance DJ46_4073 SM00382 ATPases associated with a variety of cellular activities DJ46_4075 SM00382 ATPases associated with a variety of cellular activities DJ46_4077 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DJ46_4077 SM00245 tail specific protease DJ46_4079 SM00382 ATPases associated with a variety of cellular activities DJ46_4081 SM00937 DJ46_4081 DJ46_4082 SM00957 SecA DEAD-like domain DJ46_4082 SM00958 SecA preprotein cross-linking domain DJ46_4084 SM00357 Cold shock protein domain DJ46_4086 SM00487 DEAD-like helicases superfamily DJ46_4086 SM00490 helicase superfamily c-terminal domain DJ46_4093 SM00984 UDP binding domain DJ46_4096 SM00382 ATPases associated with a variety of cellular activities DJ46_4097 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. DJ46_4128 SM00287 Bacterial SH3 domain homologues DJ46_4129 SM00287 Bacterial SH3 domain homologues DJ46_4135 SM00287 Bacterial SH3 domain homologues DJ46_4141 SM00487 DEAD-like helicases superfamily DJ46_4141 SM00490 helicase superfamily c-terminal domain DJ46_4150 SM00382 ATPases associated with a variety of cellular activities DJ46_4152 SM00530 Helix-turn-helix XRE-family like proteins DJ46_4157 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ46_4157 SM00387 Histidine kinase-like ATPases DJ46_4157 SM00388 His Kinase A (phosphoacceptor) domain DJ46_4158 SM00448 cheY-homologous receiver domain DJ46_4158 SM00862 Transcriptional regulatory protein, C terminal DJ46_4163 SM00287 Bacterial SH3 domain homologues DJ46_4163 SM00382 ATPases associated with a variety of cellular activities DJ46_4165 SM00984 UDP binding domain DJ46_4177 SM00382 ATPases associated with a variety of cellular activities DJ46_4178 SM00850 LytTr DNA-binding domain DJ46_418 SM00450 Rhodanese Homology Domain DJ46_4196 SM00052 Putative diguanylate phosphodiesterase DJ46_4196 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DJ46_4196 SM00091 PAS domain DJ46_4196 SM00267 diguanylate cyclase DJ46_4200 SM00382 ATPases associated with a variety of cellular activities DJ46_4213 SM00226 Low molecular weight phosphatase family DJ46_4216 SM00903 Flavin reductase like domain DJ46_4223 SM00937 DJ46_4223 DJ46_4226 SM00357 Cold shock protein domain DJ46_4226 SM00382 ATPases associated with a variety of cellular activities DJ46_4226 SM00959 Rho termination factor, N-terminal domain DJ46_4230 SM00448 cheY-homologous receiver domain DJ46_424 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs DJ46_424 SM00475 5'-3' exonuclease DJ46_4240 SM00155 Phospholipase D. Active site motifs. DJ46_4242 SM00052 Putative diguanylate phosphodiesterase DJ46_4242 SM00267 diguanylate cyclase DJ46_4245 SM00530 Helix-turn-helix XRE-family like proteins DJ46_4246 SM00421 helix_turn_helix, Lux Regulon DJ46_4246 SM00448 cheY-homologous receiver domain DJ46_4247 SM00387 Histidine kinase-like ATPases DJ46_4249 SM00382 ATPases associated with a variety of cellular activities DJ46_4259 SM00836 DALR anticodon binding domain DJ46_4259 SM01016 Arginyl tRNA synthetase N terminal dom DJ46_4267 SM00422 helix_turn_helix, mercury resistance DJ46_4273 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DJ46_4275 SM00382 ATPases associated with a variety of cellular activities DJ46_4285 SM00936 Penicillin-binding protein 5, C-terminal domain DJ46_4294 SM00986 Uracil DNA glycosylase superfamily DJ46_4294 SM00987 UreE urease accessory protein, C-terminal domain DJ46_4296 SM00382 ATPases associated with a variety of cellular activities DJ46_4298 SM00354 helix_turn _helix lactose operon repressor DJ46_4305 SM00100 Cyclic nucleotide-monophosphate binding domain DJ46_4307 SM00421 helix_turn_helix, Lux Regulon DJ46_4307 SM00448 cheY-homologous receiver domain DJ46_4309 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DJ46_4311 SM00267 diguanylate cyclase DJ46_4314 SM00448 cheY-homologous receiver domain DJ46_4314 SM00850 LytTr DNA-binding domain DJ46_4321 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DJ46_4326 SM00382 ATPases associated with a variety of cellular activities DJ46_4338 SM00448 cheY-homologous receiver domain DJ46_4338 SM00850 LytTr DNA-binding domain DJ46_4339 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DJ46_4339 SM00387 Histidine kinase-like ATPases DJ46_4350 SM00487 DEAD-like helicases superfamily DJ46_4350 SM00490 helicase superfamily c-terminal domain DJ46_4352 SM01240 DJ46_4352 DJ46_4357 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DJ46_4358 SM00849 Metallo-beta-lactamase superfamily DJ46_4361 SM00091 PAS domain DJ46_4361 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ46_4361 SM00387 Histidine kinase-like ATPases DJ46_4361 SM00388 His Kinase A (phosphoacceptor) domain DJ46_4362 SM00448 cheY-homologous receiver domain DJ46_4362 SM00862 Transcriptional regulatory protein, C terminal DJ46_4367 SM00788 Adenylosuccinate synthetase DJ46_4370 SM00267 diguanylate cyclase DJ46_4379 SM00470 ParB-like nuclease domain DJ46_4381 SM00470 ParB-like nuclease domain DJ46_4383 SM01228 DJ46_4383 DJ46_4385 SM00393 Putative single-stranded nucleic acids-binding domain DJ46_4385 SM01245 DJ46_4385 DJ46_4389 SM00382 ATPases associated with a variety of cellular activities DJ46_4389 SM00760 Bacterial dnaA protein helix-turn-helix domain DJ46_4390 SM00480 DNA polymerase III beta subunit DJ46_4393 SM00387 Histidine kinase-like ATPases DJ46_4393 SM00433 TopoisomeraseII DJ46_4394 SM00434 DNA Topoisomerase IV DJ46_4400 SM00116 Domain in cystathionine beta-synthase and other proteins. DJ46_4400 SM01240 DJ46_4400 DJ46_4401 SM00936 Penicillin-binding protein 5, C-terminal domain DJ46_4411 SM00382 ATPases associated with a variety of cellular activities DJ46_4413 SM00493 DJ46_4413 DJ46_4429 SM00966 SpoVT / AbrB like domain DJ46_4432 SM00493 DJ46_4432 DJ46_4433 SM00650 Ribosomal RNA adenine dimethylases DJ46_4442 SM01400 DJ46_4442 DJ46_4445 SM00487 DEAD-like helicases superfamily DJ46_4445 SM00490 helicase superfamily c-terminal domain DJ46_4445 SM00982 DJ46_4445 DJ46_4445 SM01058 CarD-like/TRCF domain DJ46_4446 SM00966 SpoVT / AbrB like domain DJ46_4449 SM00363 S4 RNA-binding domain DJ46_4453 SM00316 Ribosomal protein S1-like RNA-binding domain DJ46_4456 SM00331 Sigma factor PP2C-like phosphatases DJ46_4456 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain DJ46_4457 SM00977 TilS substrate C-terminal domain DJ46_4459 SM00382 ATPases associated with a variety of cellular activities DJ46_4467 SM00905 Dihydroneopterin aldolase DJ46_4469 SM00530 Helix-turn-helix XRE-family like proteins DJ46_4478 SM00382 ATPases associated with a variety of cellular activities DJ46_4478 SM01086 C-terminal, D2-small domain, of ClpB protein DJ46_4479 SM00382 ATPases associated with a variety of cellular activities DJ46_448 SM00357 Cold shock protein domain DJ46_4481 SM00670 Large family of predicted nucleotide-binding domains DJ46_4486 SM00840 DJ46_4486 DJ46_4487 SM00535 Ribonuclease III family DJ46_4488 SM00967 RNA 2'-O ribose methyltransferase substrate binding DJ46_4490 SM00421 helix_turn_helix, Lux Regulon DJ46_4492 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. DJ46_4493 SM00649 Ribosomal protein L11/L12 DJ46_4499 SM00663 RNA polymerase I subunit A N-terminus DJ46_45 SM01118 DJ46_45 DJ46_4503 SM00838 Elongation factor G C-terminus DJ46_4503 SM00889 Elongation factor G, domain IV DJ46_4505 SM01403 DJ46_4505 DJ46_4509 SM01382 DJ46_4509 DJ46_4509 SM01383 DJ46_4509 DJ46_4512 SM00322 K homology RNA-binding domain DJ46_4516 SM01374 DJ46_4516 DJ46_4517 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. DJ46_4529 SM00316 Ribosomal protein S1-like RNA-binding domain DJ46_4533 SM00662 RNA polymerases D DJ46_4535 SM00382 ATPases associated with a variety of cellular activities DJ46_4536 SM00382 ATPases associated with a variety of cellular activities DJ46_4542 SM00646 DJ46_4542 DJ46_4545 SM01251 DJ46_4545 DJ46_4569 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ46_4569 SM00895 DJ46_4569 DJ46_4573 SM01350 DJ46_4573 DJ46_458 SM00849 Metallo-beta-lactamase superfamily DJ46_4584 SM00382 ATPases associated with a variety of cellular activities DJ46_4584 SM00930 DJ46_4584 DJ46_4586 SM00829 Enoylreductase DJ46_459 SM00422 helix_turn_helix, mercury resistance DJ46_459 SM00871 Bacterial transcription activator, effector binding domain DJ46_4596 SM00382 ATPases associated with a variety of cellular activities DJ46_4597 SM00382 ATPases associated with a variety of cellular activities DJ46_4600 SM00342 helix_turn_helix, arabinose operon control protein DJ46_4619 SM00563 Phosphate acyltransferases DJ46_4621 SM00354 helix_turn _helix lactose operon repressor DJ46_4631 SM00382 ATPases associated with a variety of cellular activities DJ46_4637 SM00382 ATPases associated with a variety of cellular activities DJ46_4638 SM00382 ATPases associated with a variety of cellular activities DJ46_4653 SM00487 DEAD-like helicases superfamily DJ46_4653 SM00490 helicase superfamily c-terminal domain DJ46_4658 SM01005 Alanine racemase, C-terminal domain DJ46_4661 SM00316 Ribosomal protein S1-like RNA-binding domain DJ46_4661 SM00732 Likely ribonuclease with RNase H fold. DJ46_4662 SM00731 SprT homologues. DJ46_4686 SM00382 ATPases associated with a variety of cellular activities DJ46_4687 SM00881 CoA binding domain DJ46_4690 SM00883 Chaperonin 10 Kd subunit DJ46_4694 SM00448 cheY-homologous receiver domain DJ46_4694 SM00862 Transcriptional regulatory protein, C terminal DJ46_4695 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ46_4695 SM00387 Histidine kinase-like ATPases DJ46_4695 SM00388 His Kinase A (phosphoacceptor) domain DJ46_47 SM00954 Region found in RelA / SpoT proteins DJ46_4717 SM00382 ATPases associated with a variety of cellular activities DJ46_4718 SM00387 Histidine kinase-like ATPases DJ46_4718 SM00388 His Kinase A (phosphoacceptor) domain DJ46_4719 SM00448 cheY-homologous receiver domain DJ46_4719 SM00862 Transcriptional regulatory protein, C terminal DJ46_4724 SM01001 AIR carboxylase DJ46_4726 SM00998 Adenylosuccinate lyase C-terminus DJ46_4729 SM01211 DJ46_4729 DJ46_4735 SM00798 AICARFT/IMPCHase bienzyme DJ46_4735 SM00851 MGS-like domain DJ46_4736 SM01209 DJ46_4736 DJ46_4736 SM01210 DJ46_4736 DJ46_4738 SM00244 prohibitin homologues DJ46_4742 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DJ46_4742 SM00292 breast cancer carboxy-terminal domain DJ46_4742 SM00532 Ligase N family DJ46_4748 SM00382 ATPases associated with a variety of cellular activities DJ46_4748 SM00930 DJ46_4748 DJ46_4755 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ46_4759 SM00845 GatB domain DJ46_4760 SM00046 Diacylglycerol kinase catalytic domain (presumed) DJ46_4763 SM00382 ATPases associated with a variety of cellular activities DJ46_477 SM00448 cheY-homologous receiver domain DJ46_4776 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DJ46_478 SM00073 Histidine Phosphotransfer domain DJ46_4785 SM01007 Class II Aldolase and Adducin N-terminal domain DJ46_479 SM00260 Two component signalling adaptor domain DJ46_479 SM00387 Histidine kinase-like ATPases DJ46_479 SM01231 DJ46_479 DJ46_4806 SM00062 Bacterial periplasmic substrate-binding proteins DJ46_4806 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. DJ46_4807 SM00382 ATPases associated with a variety of cellular activities DJ46_4808 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DJ46_4808 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ46_4809 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DJ46_4809 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ46_4810 SM00642 Alpha-amylase domain DJ46_4814 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain DJ46_4814 SM00437 Bacterial DNA topoisomerase I DNA-binding domain DJ46_4814 SM00493 DJ46_4814 DJ46_4818 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DJ46_4818 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ46_4822 SM00382 ATPases associated with a variety of cellular activities DJ46_4823 SM00382 ATPases associated with a variety of cellular activities DJ46_4824 SM00060 Fibronectin type 3 domain DJ46_4824 SM00636 DJ46_4824 DJ46_4824 SM00637 DJ46_4824 DJ46_483 SM00138 Methyltransferase, chemotaxis proteins DJ46_4830 SM00530 Helix-turn-helix XRE-family like proteins DJ46_4835 SM00946 Prolyl-tRNA synthetase, C-terminal DJ46_4844 SM00831 Cation transporter/ATPase, N-terminus DJ46_4846 SM00226 Low molecular weight phosphatase family DJ46_4867 SM00478 endonuclease III DJ46_4873 SM00530 Helix-turn-helix XRE-family like proteins DJ46_4880 SM00382 ATPases associated with a variety of cellular activities DJ46_4929 SM00382 ATPases associated with a variety of cellular activities DJ46_4933 SM00530 Helix-turn-helix XRE-family like proteins DJ46_4944 SM00984 UDP binding domain DJ46_4961 SM00478 endonuclease III DJ46_4961 SM00525 DJ46_4961 DJ46_4966 SM00382 ATPases associated with a variety of cellular activities DJ46_4970 SM00382 ATPases associated with a variety of cellular activities DJ46_5 SM00642 Alpha-amylase domain DJ46_5003 SM00567 E-Z type HEAT repeats DJ46_5006 SM00052 Putative diguanylate phosphodiesterase DJ46_5006 SM00091 PAS domain DJ46_5006 SM00267 diguanylate cyclase DJ46_5008 SM00763 PrkA AAA domain DJ46_501 SM00382 ATPases associated with a variety of cellular activities DJ46_5010 SM00364 Leucine-rich repeats, bacterial type DJ46_5010 SM00365 Leucine-rich repeat, SDS22-like subfamily DJ46_5010 SM00369 Leucine-rich repeats, typical (most populated) subfamily DJ46_5010 SM00725 NEAr Transporter domain DJ46_5013 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins DJ46_5015 SM00244 prohibitin homologues DJ46_5016 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DJ46_5016 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ46_5017 SM00091 PAS domain DJ46_5017 SM00387 Histidine kinase-like ATPases DJ46_5018 SM00448 cheY-homologous receiver domain DJ46_5022 SM00248 ankyrin repeats DJ46_5024 SM00382 ATPases associated with a variety of cellular activities DJ46_5029 SM00448 cheY-homologous receiver domain DJ46_5029 SM00862 Transcriptional regulatory protein, C terminal DJ46_5030 SM00387 Histidine kinase-like ATPases DJ46_5030 SM00388 His Kinase A (phosphoacceptor) domain DJ46_5033 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DJ46_5033 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ46_5034 SM00387 Histidine kinase-like ATPases DJ46_5035 SM00448 cheY-homologous receiver domain DJ46_5037 SM00919 Malic enzyme, NAD binding domain DJ46_5037 SM01274 DJ46_5037 DJ46_5040 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ46_5042 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ46_5042 SM00387 Histidine kinase-like ATPases DJ46_5042 SM00388 His Kinase A (phosphoacceptor) domain DJ46_5043 SM00448 cheY-homologous receiver domain DJ46_5043 SM00862 Transcriptional regulatory protein, C terminal DJ46_5047 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DJ46_5047 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DJ46_5051 SM01002 Alanine dehydrogenase/PNT, C-terminal domain DJ46_5051 SM01003 Alanine dehydrogenase/PNT, N-terminal domain DJ46_5053 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DJ46_5056 SM00028 Tetratricopeptide repeats DJ46_5056 SM00530 Helix-turn-helix XRE-family like proteins DJ46_5069 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DJ46_5075 SM00382 ATPases associated with a variety of cellular activities DJ46_5080 SM00327 von Willebrand factor (vWF) type A domain DJ46_5081 SM00382 ATPases associated with a variety of cellular activities DJ46_5082 SM00155 Phospholipase D. Active site motifs. DJ46_5085 SM00052 Putative diguanylate phosphodiesterase DJ46_5085 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DJ46_5085 SM00091 PAS domain DJ46_5085 SM00267 diguanylate cyclase DJ46_5087 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ46_5087 SM00866 DJ46_5087 DJ46_5089 SM00642 Alpha-amylase domain DJ46_5097 SM00382 ATPases associated with a variety of cellular activities DJ46_5098 SM00062 Bacterial periplasmic substrate-binding proteins DJ46_5098 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. DJ46_510 SM00260 Two component signalling adaptor domain DJ46_510 SM00448 cheY-homologous receiver domain DJ46_5108 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ46_5108 SM00387 Histidine kinase-like ATPases DJ46_5108 SM00388 His Kinase A (phosphoacceptor) domain DJ46_5109 SM00448 cheY-homologous receiver domain DJ46_5109 SM00862 Transcriptional regulatory protein, C terminal DJ46_5117 SM00382 ATPases associated with a variety of cellular activities DJ46_5118 SM00382 ATPases associated with a variety of cellular activities DJ46_5120 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ46_5123 SM00354 helix_turn _helix lactose operon repressor DJ46_5126 SM00382 ATPases associated with a variety of cellular activities DJ46_5133 SM00829 Enoylreductase DJ46_5135 SM00770 Zinc dependent phospholipase C (alpha toxin) DJ46_5142 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DJ46_5144 SM00530 Helix-turn-helix XRE-family like proteins DJ46_5153 SM00530 Helix-turn-helix XRE-family like proteins DJ46_516 SM00028 Tetratricopeptide repeats DJ46_5171 SM00899 DJ46_5171 DJ46_519 SM00028 Tetratricopeptide repeats DJ46_5201 SM00116 Domain in cystathionine beta-synthase and other proteins. DJ46_5204 SM00287 Bacterial SH3 domain homologues DJ46_5206 SM00382 ATPases associated with a variety of cellular activities DJ46_5223 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ46_5232 SM00640 Glycosyl hydrolases family 32 DJ46_5234 SM00354 helix_turn _helix lactose operon repressor DJ46_5248 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ46_5251 SM00450 Rhodanese Homology Domain DJ46_5253 SM00450 Rhodanese Homology Domain DJ46_5254 SM00450 Rhodanese Homology Domain DJ46_5254 SM00849 Metallo-beta-lactamase superfamily DJ46_5258 SM00450 Rhodanese Homology Domain DJ46_5263 SM00829 Enoylreductase DJ46_5273 SM00287 Bacterial SH3 domain homologues DJ46_5275 SM00382 ATPases associated with a variety of cellular activities DJ46_5286 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen DJ46_5305 SM00344 helix_turn_helix ASNC type DJ46_5318 SM01060 DJ46_5318 DJ46_5324 SM00382 ATPases associated with a variety of cellular activities DJ46_5326 SM00382 ATPases associated with a variety of cellular activities DJ46_5327 SM00062 Bacterial periplasmic substrate-binding proteins DJ46_5327 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. DJ46_5329 SM00382 ATPases associated with a variety of cellular activities DJ46_534 SM00382 ATPases associated with a variety of cellular activities DJ46_534 SM00962 SRP54-type protein, GTPase domain DJ46_5344 SM00644 DJ46_5344 DJ46_5346 SM00729 Elongator protein 3, MiaB family, Radical SAM DJ46_5353 SM00957 SecA DEAD-like domain DJ46_5353 SM00958 SecA preprotein cross-linking domain DJ46_5356 SM00635 Bacterial Ig-like domain 2 DJ46_536 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DJ46_5367 SM00646 DJ46_5367 DJ46_5381 SM00382 ATPases associated with a variety of cellular activities DJ46_5385 SM00860 SMI1 / KNR4 family DJ46_5386 SM00860 SMI1 / KNR4 family DJ46_5388 SM00091 PAS domain DJ46_5388 SM00387 Histidine kinase-like ATPases DJ46_5389 SM00448 cheY-homologous receiver domain DJ46_5395 SM00422 helix_turn_helix, mercury resistance DJ46_5420 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ46_5427 SM01120 DJ46_5427 DJ46_5435 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DJ46_5440 SM00460 Transglutaminase/protease-like homologues DJ46_5452 SM00331 Sigma factor PP2C-like phosphatases DJ46_5452 SM00448 cheY-homologous receiver domain DJ46_5453 SM00138 Methyltransferase, chemotaxis proteins DJ46_5454 SM00387 Histidine kinase-like ATPases DJ46_5454 SM00388 His Kinase A (phosphoacceptor) domain DJ46_5454 SM00448 cheY-homologous receiver domain DJ46_5461 SM00829 Enoylreductase DJ46_5469 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DJ46_547 SM00530 Helix-turn-helix XRE-family like proteins DJ46_5474 SM00028 Tetratricopeptide repeats DJ46_5479 SM00530 Helix-turn-helix XRE-family like proteins DJ46_5489 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ46_5498 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ46_5501 SM00382 ATPases associated with a variety of cellular activities DJ46_551 SM00382 ATPases associated with a variety of cellular activities DJ46_5517 SM00422 helix_turn_helix, mercury resistance DJ46_5538 SM00354 helix_turn _helix lactose operon repressor DJ46_554 SM00849 Metallo-beta-lactamase superfamily DJ46_554 SM01027 Beta-Casp domain DJ46_5540 SM00849 Metallo-beta-lactamase superfamily DJ46_5545 SM00725 NEAr Transporter domain DJ46_5557 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DJ46_5560 SM00342 helix_turn_helix, arabinose operon control protein DJ46_5560 SM00871 Bacterial transcription activator, effector binding domain DJ46_5563 SM00387 Histidine kinase-like ATPases DJ46_5563 SM00388 His Kinase A (phosphoacceptor) domain DJ46_5564 SM00448 cheY-homologous receiver domain DJ46_5564 SM00862 Transcriptional regulatory protein, C terminal DJ46_5570 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DJ46_5570 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ46_5578 SM00357 Cold shock protein domain DJ46_558 SM00835 Cupin DJ46_5606 SM00487 DEAD-like helicases superfamily DJ46_5607 SM00507 HNH nucleases DJ46_561 SM00855 Phosphoglycerate mutase family DJ46_5621 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain DJ46_5621 SM00437 Bacterial DNA topoisomerase I DNA-binding domain DJ46_5621 SM00493 DJ46_5621 DJ46_5623 SM00318 Staphylococcal nuclease homologues DJ46_5627 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DJ46_5630 SM00028 Tetratricopeptide repeats DJ46_5636 SM00954 Region found in RelA / SpoT proteins DJ46_5645 SM00860 SMI1 / KNR4 family DJ46_5664 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DJ46_5665 SM00758 DJ46_5665 DJ46_5670 SM00857 Resolvase, N terminal domain DJ46_5677 SM01207 DJ46_5677 DJ46_5697 SM00984 UDP binding domain DJ46_5703 SM00014 Acid phosphatase homologues DJ46_5708 SM00725 NEAr Transporter domain DJ46_574 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ46_574 SM00895 DJ46_574 DJ46_5758 SM00864 Tubulin/FtsZ family, GTPase domain DJ46_576 SM00833 Cobalamin synthesis protein cobW C-terminal domain DJ46_5761 SM00843 DJ46_5761 DJ46_5764 SM00530 Helix-turn-helix XRE-family like proteins DJ46_5791 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain DJ46_5825 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain DJ46_5825 SM00493 DJ46_5825 DJ46_5826 SM00437 Bacterial DNA topoisomerase I DNA-binding domain DJ46_5856 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DJ46_5860 SM00854 Bacterial capsule synthesis protein PGA_cap DJ46_5868 SM00014 Acid phosphatase homologues DJ46_5881 SM00646 DJ46_5881 DJ46_594 SM00530 Helix-turn-helix XRE-family like proteins DJ46_6 SM00530 Helix-turn-helix XRE-family like proteins DJ46_603 SM00421 helix_turn_helix, Lux Regulon DJ46_603 SM00448 cheY-homologous receiver domain DJ46_605 SM00382 ATPases associated with a variety of cellular activities DJ46_608 SM00155 Phospholipase D. Active site motifs. DJ46_612 SM00919 Malic enzyme, NAD binding domain DJ46_612 SM01274 DJ46_612 DJ46_613 SM00387 Histidine kinase-like ATPases DJ46_614 SM00448 cheY-homologous receiver domain DJ46_615 SM00487 DEAD-like helicases superfamily DJ46_615 SM00490 helicase superfamily c-terminal domain DJ46_627 SM00646 DJ46_627 DJ46_628 SM00047 Lysozyme subfamily 2 DJ46_665 SM00854 Bacterial capsule synthesis protein PGA_cap DJ46_671 SM00850 LytTr DNA-binding domain DJ46_683 SM00729 Elongator protein 3, MiaB family, Radical SAM DJ46_685 SM00448 cheY-homologous receiver domain DJ46_685 SM00862 Transcriptional regulatory protein, C terminal DJ46_686 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ46_687 SM00387 Histidine kinase-like ATPases DJ46_687 SM00388 His Kinase A (phosphoacceptor) domain DJ46_690 SM00450 Rhodanese Homology Domain DJ46_701 SM01133 DJ46_701 DJ46_703 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain DJ46_709 SM01011 Aminopeptidase P, N-terminal domain DJ46_712 SM00287 Bacterial SH3 domain homologues DJ46_714 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain DJ46_714 SM00437 Bacterial DNA topoisomerase I DNA-binding domain DJ46_714 SM00493 DJ46_714 DJ46_734 SM00833 Cobalamin synthesis protein cobW C-terminal domain DJ46_741 SM00382 ATPases associated with a variety of cellular activities DJ46_742 SM00382 ATPases associated with a variety of cellular activities DJ46_749 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ46_753 SM00382 ATPases associated with a variety of cellular activities DJ46_754 SM00382 ATPases associated with a variety of cellular activities DJ46_760 SM00287 Bacterial SH3 domain homologues DJ46_763 SM00382 ATPases associated with a variety of cellular activities DJ46_764 SM00448 cheY-homologous receiver domain DJ46_764 SM00862 Transcriptional regulatory protein, C terminal DJ46_765 SM00387 Histidine kinase-like ATPases DJ46_765 SM00388 His Kinase A (phosphoacceptor) domain DJ46_78 SM00635 Bacterial Ig-like domain 2 DJ46_780 SM00448 cheY-homologous receiver domain DJ46_780 SM00862 Transcriptional regulatory protein, C terminal DJ46_781 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ46_781 SM00387 Histidine kinase-like ATPases DJ46_781 SM00388 His Kinase A (phosphoacceptor) domain DJ46_8 SM00316 Ribosomal protein S1-like RNA-binding domain DJ46_801 SM00460 Transglutaminase/protease-like homologues DJ46_807 SM00966 SpoVT / AbrB like domain DJ46_809 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DJ46_816 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DJ46_816 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ46_828 SM00833 Cobalamin synthesis protein cobW C-terminal domain DJ46_848 SM00855 Phosphoglycerate mutase family DJ46_858 SM00155 Phospholipase D. Active site motifs. DJ46_863 SM01091 Transporter associated domain DJ46_878 SM00244 prohibitin homologues DJ46_879 SM00855 Phosphoglycerate mutase family DJ46_882 SM01005 Alanine racemase, C-terminal domain DJ46_888 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ46_911 SM00487 DEAD-like helicases superfamily DJ46_911 SM00490 helicase superfamily c-terminal domain DJ46_915 SM00829 Enoylreductase DJ46_919 SM00849 Metallo-beta-lactamase superfamily DJ46_922 SM00460 Transglutaminase/protease-like homologues DJ46_927 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DJ46_931 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ46_932 SM00382 ATPases associated with a variety of cellular activities DJ46_934 SM00100 Cyclic nucleotide-monophosphate binding domain DJ46_934 SM00419 helix_turn_helix, cAMP Regulatory protein DJ46_935 SM00729 Elongator protein 3, MiaB family, Radical SAM DJ46_937 SM00852 Probable molybdopterin binding domain DJ46_950 SM00894 Excalibur calcium-binding domain DJ46_961 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DJ46_962 SM00382 ATPases associated with a variety of cellular activities DJ46_969 SM00567 E-Z type HEAT repeats DJ46_969 SM00932 Scaffold protein Nfu/NifU N terminal DJ46_973 SM00836 DALR anticodon binding domain DJ46_973 SM01016 Arginyl tRNA synthetase N terminal dom DJ46_977 SM00028 Tetratricopeptide repeats DJ46_978 SM00028 Tetratricopeptide repeats DJ46_984 SM00327 von Willebrand factor (vWF) type A domain DJ46_987 SM00382 ATPases associated with a variety of cellular activities DJ46_990 SM00028 Tetratricopeptide repeats DJ46_997 SM00857 Resolvase, N terminal domain