locus-tag	class	description
BAOM_0002	COG0592	DNA-directed DNA polymerase activity
BAOM_0003	COG2501	S4 domain
BAOM_0004	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
BAOM_0006	COG0187	DNA topoisomerase II activity
BAOM_0007	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BAOM_0015	COG0517	IMP dehydrogenase activity
BAOM_0015	COG0516	GMP reductase activity
BAOM_0019	COG1335	isochorismatase
BAOM_0020	COG0590	tRNA wobble adenosine to inosine editing
BAOM_0021	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
BAOM_0022	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
BAOM_0033	COG1982	Orn Lys Arg decarboxylase major
BAOM_0035	COG0470	DNA polymerase III
BAOM_0036	COG1774	PSP1 C-terminal conserved region
BAOM_0037	COG4467	Involved in initiation control of chromosome replication
BAOM_0038	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
BAOM_0040	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
BAOM_0041	COG2002	toxin-antitoxin pair type II binding
BAOM_0043	COG0084	hydrolase, TatD family'
BAOM_0044	COG3583	domain protein
BAOM_0044	COG3584	3D domain protein
BAOM_0046	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
BAOM_0048	COG4466	Protein conserved in bacteria
BAOM_0051	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
BAOM_0052	COG0251	oxidation-reduction process
BAOM_0053	COG2088	sporulation resulting in formation of a cellular spore
BAOM_0054	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
BAOM_0055	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BAOM_0056	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
BAOM_0059	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
BAOM_0060	COG2002	toxin-antitoxin pair type II binding
BAOM_0061	COG2244	polysaccharide biosynthetic process
BAOM_0062	COG3956	TIGRFAM MazG family protein
BAOM_0063	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
BAOM_0066	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
BAOM_0067	COG1098	S1 RNA binding domain
BAOM_0070	COG2208	phosphoserine phosphatase activity
BAOM_0071	COG2304	oxidoreductase activity
BAOM_0072	COG0515	serine threonine protein kinase
BAOM_0073	COG0037	tRNA processing
BAOM_0075	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BAOM_0076	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
BAOM_0077	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
BAOM_0078	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BAOM_0079	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
BAOM_0080	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
BAOM_0081	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
BAOM_0082	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
BAOM_0083	COG1396	sequence-specific DNA binding
BAOM_0084	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BAOM_0085	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
BAOM_0105	COG3880	PFAM UvrB UvrC protein
BAOM_0106	COG3869	Catalyzes the specific phosphorylation of arginine residues in
BAOM_0107	COG0542	response to heat
BAOM_0108	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
BAOM_0110	COG4956	integral membrane protein (PIN domain superfamily)
BAOM_0111	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
BAOM_0112	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
BAOM_0113	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
BAOM_0114	COG1045	serine acetyltransferase
BAOM_0115	COG0215	cysteine-tRNA ligase activity
BAOM_0117	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BAOM_0118	COG3688	RNA-binding protein containing a PIN domain
BAOM_0120	COG0267	Belongs to the bacterial ribosomal protein bL33 family
BAOM_0121	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BAOM_0122	COG0250	Participates in transcription elongation, termination and antitermination
BAOM_0123	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
BAOM_0124	COG0081	regulation of translation
BAOM_0127	COG2813	Specifically methylates the guanine in position
BAOM_0128	COG0085	RNA polymerase activity
BAOM_0129	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BAOM_0130	COG1358	cellular component organization or biogenesis
BAOM_0131	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
BAOM_0132	COG0049	tRNA binding
BAOM_0134	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
BAOM_0136	COG0051	transcription antitermination factor activity, RNA binding
BAOM_0137	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
BAOM_0138	COG0088	Forms part of the polypeptide exit tunnel
BAOM_0140	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
BAOM_0141	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
BAOM_0142	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
BAOM_0143	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
BAOM_0144	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
BAOM_0145	COG0255	Belongs to the universal ribosomal protein uL29 family
BAOM_0146	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
BAOM_0147	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
BAOM_0148	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
BAOM_0151	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
BAOM_0152	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
BAOM_0153	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
BAOM_0155	COG1841	ribosomal large subunit assembly
BAOM_0157	COG0201	protein transport
BAOM_0158	COG0563	adenylate kinase activity
BAOM_0159	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
BAOM_0160	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
BAOM_0161	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
BAOM_0162	COG0202	RNA polymerase activity
BAOM_0163	COG0203	ribosomal protein L17
BAOM_0166	COG1122	ATPase activity
BAOM_0167	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BAOM_0169	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
BAOM_0170	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
BAOM_0171	COG0726	polysaccharide deacetylase
BAOM_0174	COG0860	N-Acetylmuramoyl-L-alanine amidase
BAOM_0175	COG0489	protein tyrosine kinase activity
BAOM_0177	COG2194	sulfuric ester hydrolase activity
BAOM_0178	COG0726	polysaccharide deacetylase
BAOM_0193	COG1595	DNA-templated transcription, initiation
BAOM_0194	COG5662	AntiSigma factor
BAOM_0195	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
BAOM_0196	COG4856	YbbR-like protein
BAOM_0197	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BAOM_0198	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
BAOM_0210	COG5001	Diguanylate cyclase
BAOM_0210	COG3300	MHYT domain
BAOM_0214	COG1114	Component of the transport system for branched-chain amino acids
BAOM_0217	COG1132	(ABC) transporter
BAOM_0218	COG1609	Transcriptional regulator
BAOM_0221	COG4585	Histidine kinase
BAOM_0222	COG2197	response regulator
BAOM_0224	COG2814	Major facilitator Superfamily
BAOM_0225	COG1529	Aldehyde oxidase and xanthine dehydrogenase
BAOM_0229	COG2814	Major facilitator Superfamily
BAOM_0230	COG3403	YqcI/YcgG family
BAOM_0252	COG2207	Transcriptional regulator
BAOM_0255	COG0697	spore germination
BAOM_0257	COG1268	BioY protein
BAOM_0259	COG1268	BioY protein
BAOM_0260	COG0318	PFAM AMP-dependent synthetase and ligase
BAOM_0261	COG0183	Belongs to the thiolase family
BAOM_0264	COG2204	response regulator
BAOM_0265	COG3852	Histidine kinase
BAOM_0267	COG0840	transmembrane signaling receptor activity
BAOM_0269	COG0765	amino acid transport
BAOM_0270	COG0765	amino acid transport
BAOM_0271	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BAOM_0272	COG1126	abc transporter atp-binding protein
BAOM_0273	COG1126	abc transporter atp-binding protein
BAOM_0275	COG0726	polysaccharide deacetylase
BAOM_0276	COG5577	PFAM Coat F domain
BAOM_0283	COG1086	Polysaccharide biosynthesis protein
BAOM_0285	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
BAOM_0286	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
BAOM_0290	COG1216	Glycosyl transferase, family 2
BAOM_0293	COG2323	membrane
BAOM_0295	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BAOM_0298	COG1278	Cold shock
BAOM_0301	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BAOM_0305	COG2259	Doxx family
BAOM_0306	COG0726	polysaccharide deacetylase
BAOM_0308	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
BAOM_0312	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BAOM_0313	COG1695	Transcriptional regulator
BAOM_0315	COG1132	(ABC) transporter
BAOM_0316	COG0242	peptide deformylase activity
BAOM_0317	COG4884	unkown
BAOM_0317	COG3831	ATPase activity
BAOM_0318	COG2814	Major facilitator Superfamily
BAOM_0320	COG0789	Transcriptional regulator
BAOM_0321	COG1253	flavin adenine dinucleotide binding
BAOM_0337	COG0306	phosphate transporter
BAOM_0341	COG2138	Cobalamin (vitamin B12) biosynthesis CbiX protein
BAOM_0342	COG4974	Belongs to the 'phage' integrase family
BAOM_0343	COG4106	trans-aconitate 2-methyltransferase activity
BAOM_0344	COG0583	DNA-binding transcription factor activity
BAOM_0346	COG0243	molybdopterin cofactor binding
BAOM_0354	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
BAOM_0356	COG0513	Belongs to the DEAD box helicase family
BAOM_0357	COG3402	PFAM membrane-flanked domain
BAOM_0358	COG3428	Bacterial PH domain
BAOM_0359	COG0705	Rhomboid family
BAOM_0360	COG0736	holo-[acyl-carrier-protein] synthase activity
BAOM_0361	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
BAOM_0363	COG0864	Transcriptional regulator
BAOM_0364	COG2337	Toxic component of a toxin-antitoxin (TA) module
BAOM_0365	COG2183	response to ionizing radiation
BAOM_0367	COG3091	SprT-like family
BAOM_0386	COG0802	atpase or kinase
BAOM_0387	COG1214	PFAM Peptidase M22, glycoprotease
BAOM_0388	COG0456	acetyltransferase
BAOM_0390	COG0488	(ABC) transporter
BAOM_0391	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
BAOM_0393	COG1266	CAAX protease self-immunity
BAOM_0394	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
BAOM_0397	COG0814	amino acid
BAOM_0399	COG3540	Alkaline phosphatase
BAOM_0400	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BAOM_0401	COG0805	protein transport
BAOM_0403	COG1136	(ABC) transporter
BAOM_0406	COG1960	acyl-CoA dehydrogenase activity
BAOM_0408	COG1024	Enoyl-CoA hydratase
BAOM_0409	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BAOM_0410	COG1414	Transcriptional regulator
BAOM_0411	COG1556	Lactate utilization protein
BAOM_0414	COG2186	Transcriptional regulator
BAOM_0415	COG1620	l-lactate permease
BAOM_0416	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
BAOM_0418	COG2814	Major facilitator Superfamily
BAOM_0421	COG1012	belongs to the aldehyde dehydrogenase family
BAOM_0422	COG0714	Associated with various cellular activities
BAOM_0423	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
BAOM_0424	COG1305	Transglutaminase-like
BAOM_0427	COG0519	Catalyzes the synthesis of GMP from XMP
BAOM_0427	COG0518	GMP synthase (glutamine-hydrolyzing) activity
BAOM_0428	COG2252	PERMEase
BAOM_0435	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
BAOM_0436	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
BAOM_0437	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
BAOM_0439	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BAOM_0440	COG0047	phosphoribosylformylglycinamidine synthase activity
BAOM_0442	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
BAOM_0444	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
BAOM_0446	COG0151	Belongs to the GarS family
BAOM_0449	COG1470	cell adhesion involved in biofilm formation
BAOM_0450	COG4496	protein, YerC YecD
BAOM_0451	COG1646	35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales
BAOM_0452	COG0210	DNA helicase
BAOM_0453	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
BAOM_0454	COG4851	CamS sex pheromone cAM373 precursor
BAOM_0455	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
BAOM_0456	COG0154	amidase activity
BAOM_0457	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
BAOM_0458	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
BAOM_0459	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
BAOM_0460	COG0789	Transcriptional regulator
BAOM_0461	COG0577	efflux transmembrane transporter activity
BAOM_0462	COG1136	(ABC) transporter
BAOM_0463	COG1597	lipid kinase activity
BAOM_0464	COG0456	acetyltransferase
BAOM_0471	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BAOM_0472	COG0765	amino acid transport
BAOM_0474	COG1113	amino acid transport
BAOM_0475	COG1297	OPT oligopeptide transporter protein
BAOM_0477	COG1823	symporter activity
BAOM_0482	COG0028	Belongs to the TPP enzyme family
BAOM_0483	COG1012	belongs to the aldehyde dehydrogenase family
BAOM_0485	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
BAOM_0486	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BAOM_0488	COG0730	response to heat
BAOM_0489	COG2368	4-hydroxyphenylacetate
BAOM_0490	COG0196	riboflavin kinase activity
BAOM_0491	COG0431	NADPH-dependent FMN reductase
BAOM_0500	COG2162	N-hydroxyarylamine O-acetyltransferase activity
BAOM_0501	COG2814	Major facilitator Superfamily
BAOM_0502	COG3290	protein histidine kinase activity
BAOM_0503	COG4565	transcriptional regulatory protein
BAOM_0504	COG2851	Citrate transporter
BAOM_0507	COG1929	Belongs to the glycerate kinase type-1 family
BAOM_0509	COG0745	RESPONSE REGULATOR receiver
BAOM_0510	COG5002	protein histidine kinase activity
BAOM_0510	COG3850	Histidine kinase
BAOM_0512	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BAOM_0513	COG0243	molybdopterin cofactor binding
BAOM_0514	COG2223	nitrite transmembrane transporter activity
BAOM_0515	COG0789	Transcriptional regulator
BAOM_0516	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BAOM_0517	COG2146	nitrite reductase [NAD(P)H] activity
BAOM_0521	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
BAOM_0521	COG0512	Glutamine amidotransferase of anthranilate synthase
BAOM_0522	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BAOM_0523	COG0494	nUDIX hydrolase
BAOM_0524	COG1335	isochorismatase
BAOM_0525	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
BAOM_0526	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
BAOM_0528	COG2195	Cleaves the N-terminal amino acid of tripeptides
BAOM_0532	COG1695	Transcriptional regulator
BAOM_0535	COG0385	Bile acid
BAOM_0536	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
BAOM_0537	COG0022	dehydrogenase e1 component
BAOM_0538	COG0508	dehydrogenase complex catalyzes the overall conversion of
BAOM_0539	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BAOM_0540	COG1028	Short-chain dehydrogenase reductase Sdr
BAOM_0541	COG3284	Transcriptional regulator
BAOM_0542	COG0653	protein targeting
BAOM_0543	COG2514	catechol 2,3-dioxygenase activity
BAOM_0574	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BAOM_0576	COG0531	amino acid
BAOM_0578	COG0146	N-methylhydantoinase B acetone carboxylase alpha subunit
BAOM_0579	COG0726	polysaccharide deacetylase
BAOM_0580	COG1187	pseudouridine synthase activity
BAOM_0581	COG0697	spore germination
BAOM_0590	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BAOM_0593	COG0640	Transcriptional regulator
BAOM_0594	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
BAOM_0596	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BAOM_0599	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
BAOM_0600	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BAOM_0602	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
BAOM_0603	COG2205	protein histidine kinase activity
BAOM_0603	COG0784	Response regulator, receiver
BAOM_0606	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
BAOM_0607	COG0527	aspartate kinase activity
BAOM_0608	COG0659	secondary active sulfate transmembrane transporter activity
BAOM_0610	COG3594	Acyltransferase
BAOM_0611	COG1132	(ABC) transporter
BAOM_0612	COG1132	(ABC) transporter
BAOM_0613	COG1966	Carbon starvation protein
BAOM_0614	COG2879	small protein
BAOM_0615	COG0004	ammonium transporteR
BAOM_0616	COG0347	Belongs to the P(II) protein family
BAOM_0619	COG3279	Response regulator of the LytR AlgR family
BAOM_0620	COG0427	acetyl-CoA hydrolase
BAOM_0621	COG0628	permease
BAOM_0622	COG1309	transcriptional regulator
BAOM_0623	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BAOM_0624	COG1309	transcriptional regulator
BAOM_0626	COG1012	belongs to the aldehyde dehydrogenase family
BAOM_0627	COG1301	dicarboxylic acid transport
BAOM_0628	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BAOM_0629	COG1388	LysM domain
BAOM_0629	COG3584	3D domain protein
BAOM_0629	COG1388	LysM domain
BAOM_0629	COG3584	3D domain protein
BAOM_0630	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
BAOM_0633	COG1404	Belongs to the peptidase S8 family
BAOM_0635	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BAOM_0636	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BAOM_0637	COG5002	protein histidine kinase activity
BAOM_0638	COG0513	Belongs to the DEAD box helicase family
BAOM_0639	COG0307	riboflavin synthase, alpha
BAOM_0640	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
BAOM_0640	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
BAOM_0642	COG2404	hydrolase activity, acting on ester bonds
BAOM_0643	COG1295	ribonuclease BN
BAOM_0644	COG1077	Cell shape determining protein MreB Mrl
BAOM_0646	COG3180	Ammonia monooxygenase
BAOM_0647	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
BAOM_0648	COG1360	Flagellar Motor Protein
BAOM_0649	COG0024	Methionine aminopeptidase
BAOM_0651	COG4840	Belongs to the UPF0435 family
BAOM_0653	COG1295	ribonuclease BN
BAOM_0655	COG2217	Heavy metal translocating P-type atpase
BAOM_0657	COG0387	Pfam Sodium calcium exchanger
BAOM_0659	COG0535	radical SAM domain protein
BAOM_0665	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BAOM_0667	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BAOM_0668	COG3002	Belongs to the UPF0753 family
BAOM_0669	COG5609	conserved protein (DUF2294)
BAOM_0670	COG0288	reversible hydration of carbon dioxide
BAOM_0671	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
BAOM_0672	COG0573	inorganic phosphate transmembrane transporter activity
BAOM_0673	COG0581	inorganic phosphate transmembrane transporter activity
BAOM_0675	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
BAOM_0676	COG0196	riboflavin kinase activity
BAOM_0677	COG0196	riboflavin kinase activity
BAOM_0679	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BAOM_0684	COG0583	DNA-binding transcription factor activity
BAOM_0685	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
BAOM_0687	COG1366	Belongs to the anti-sigma-factor antagonist family
BAOM_0688	COG2720	vancomycin resistance protein
BAOM_0689	COG0626	cystathionine gamma-synthase activity
BAOM_0690	COG1404	Belongs to the peptidase S8 family
BAOM_0691	COG0697	spore germination
BAOM_0692	COG0531	amino acid
BAOM_0695	COG0737	Belongs to the 5'-nucleotidase family
BAOM_0695	COG4085	toxin activity
BAOM_0695	COG1525	nuclease
BAOM_0700	COG0577	efflux transmembrane transporter activity
BAOM_0701	COG1136	(ABC) transporter
BAOM_0702	COG2205	protein histidine kinase activity
BAOM_0703	COG0745	RESPONSE REGULATOR receiver
BAOM_0705	COG3069	C4-dicarboxylate transmembrane transporter activity
BAOM_0707	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
BAOM_0709	COG2112	serine threonine protein kinase
BAOM_0711	COG0277	FAD linked oxidase domain protein
BAOM_0717	COG0004	ammonium transporteR
BAOM_0719	COG2310	stress, protein
BAOM_0720	COG2310	stress, protein
BAOM_0721	COG2310	stress, protein
BAOM_0722	COG0861	Integral membrane protein TerC family
BAOM_0728	COG1187	pseudouridine synthase activity
BAOM_0730	COG4915	5-bromo-4-chloroindolyl phosphate hydrolysis protein
BAOM_0731	COG3853	Toxic anion resistance protein (TelA)
BAOM_0732	COG0166	Belongs to the GPI family
BAOM_0733	COG0628	permease
BAOM_0735	COG0583	DNA-binding transcription factor activity
BAOM_0739	COG1090	epimerase
BAOM_0745	COG1988	membrane-bound metal-dependent
BAOM_0746	COG1194	a g-specific adenine glycosylase
BAOM_0748	COG1028	Short-chain dehydrogenase reductase Sdr
BAOM_0751	COG3557	Belongs to the UPF0374 family
BAOM_0753	COG1132	(ABC) transporter
BAOM_0755	COG4129	membrane
BAOM_0756	COG0070	glutamate synthase
BAOM_0756	COG0069	glutamate synthase activity
BAOM_0756	COG0067	glutamate synthase
BAOM_0757	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
BAOM_0758	COG4555	ABC transporter
BAOM_0762	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
BAOM_0763	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BAOM_0764	COG0735	belongs to the Fur family
BAOM_0788	COG0582	viral genome integration into host DNA
BAOM_0790	COG1760	l-serine dehydratase
BAOM_0792	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BAOM_0793	COG0196	riboflavin kinase activity
BAOM_0794	COG0196	riboflavin kinase activity
BAOM_0799	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BAOM_0800	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BAOM_0803	COG2267	carboxylic ester hydrolase activity
BAOM_0804	COG3243	poly(R)-hydroxyalkanoic acid synthase
BAOM_0805	COG1028	Short-chain dehydrogenase reductase Sdr
BAOM_0809	COG1028	Short-chain dehydrogenase reductase Sdr
BAOM_0810	COG0583	DNA-binding transcription factor activity
BAOM_0811	COG2031	fatty acid transporter
BAOM_0814	COG3382	B3 4 domain protein
BAOM_0815	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
BAOM_0817	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
BAOM_0818	COG0778	Nitroreductase
BAOM_0819	COG2766	serine protein kinase
BAOM_0821	COG2718	Belongs to the UPF0229 family
BAOM_0822	COG0531	amino acid
BAOM_0825	COG0697	spore germination
BAOM_0827	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
BAOM_0828	COG2094	Belongs to the DNA glycosylase MPG family
BAOM_0829	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BAOM_0830	COG0686	Belongs to the AlaDH PNT family
BAOM_0831	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
BAOM_0831	COG2508	Transcriptional regulator
BAOM_0832	COG0306	phosphate transporter
BAOM_0833	COG1392	Phosphate transport regulator
BAOM_0834	COG0656	L-ascorbic acid biosynthetic process
BAOM_0835	COG1115	amino acid carrier protein
BAOM_0836	COG0564	pseudouridine synthase activity
BAOM_0838	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BAOM_0839	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BAOM_0840	COG0431	NADPH-dependent FMN reductase
BAOM_0844	COG2719	SpoVR family
BAOM_0845	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BAOM_0847	COG3546	catalase activity
BAOM_0851	COG0583	DNA-binding transcription factor activity
BAOM_0852	COG0697	spore germination
BAOM_0854	COG1522	sequence-specific DNA binding
BAOM_0855	COG2059	Chromate
BAOM_0856	COG2059	Chromate
BAOM_0857	COG0405	Gamma-glutamyltransferase
BAOM_0858	COG2351	hydroxyisourate hydrolase activity
BAOM_0859	COG3195	allantoin biosynthetic process
BAOM_0859	COG3648	Uricase
BAOM_0860	COG2233	PERMEase
BAOM_0861	COG2508	Transcriptional regulator
BAOM_0863	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BAOM_0864	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
BAOM_0865	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
BAOM_0867	COG0814	amino acid
BAOM_0868	COG0697	spore germination
BAOM_0870	COG0586	Pfam SNARE associated Golgi protein
BAOM_0873	COG0745	RESPONSE REGULATOR receiver
BAOM_0874	COG5002	protein histidine kinase activity
BAOM_0874	COG3850	Histidine kinase
BAOM_0875	COG1393	Belongs to the ArsC family
BAOM_0877	COG1278	Cold shock
BAOM_0879	COG3858	chitin binding
BAOM_0880	COG0716	FMN binding
BAOM_0881	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BAOM_0882	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BAOM_0883	COG1227	inorganic diphosphatase activity
BAOM_0884	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
BAOM_0887	COG3185	4-Hydroxyphenylpyruvate dioxygenase
BAOM_0888	COG4844	belongs to the
BAOM_0897	COG1253	flavin adenine dinucleotide binding
BAOM_0898	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BAOM_0900	COG0586	Pfam SNARE associated Golgi protein
BAOM_0901	COG0586	Pfam SNARE associated Golgi protein
BAOM_0902	COG1253	flavin adenine dinucleotide binding
BAOM_0903	COG3852	Histidine kinase
BAOM_0904	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
BAOM_0905	COG3859	Proton-coupled thiamine transporter YuaJ
BAOM_0907	COG1595	DNA-templated transcription, initiation
BAOM_0910	COG0393	Putative heavy-metal-binding
BAOM_0912	COG1131	(ABC) transporter
BAOM_0914	COG0386	Belongs to the glutathione peroxidase family
BAOM_0915	COG0386	Belongs to the glutathione peroxidase family
BAOM_0919	COG3593	DNA synthesis involved in DNA repair
BAOM_0919	COG3593	DNA synthesis involved in DNA repair
BAOM_0920	COG0210	DNA helicase
BAOM_0946	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BAOM_0948	COG0626	cystathionine gamma-synthase activity
BAOM_0949	COG0626	cystathionine gamma-synthase activity
BAOM_0952	COG0371	Dehydrogenase
BAOM_0953	COG1464	Belongs to the NlpA lipoprotein family
BAOM_0954	COG2011	ABC-type metal ion transport system permease component
BAOM_0955	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BAOM_0960	COG0189	ligase activity
BAOM_0961	COG0189	ligase activity
BAOM_0962	COG0189	ligase activity
BAOM_0966	COG0561	phosphatase activity
BAOM_0968	COG0831	urea catabolic process
BAOM_0969	COG0832	Belongs to the urease beta subunit family
BAOM_0971	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
BAOM_0975	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BAOM_0978	COG2318	DinB family
BAOM_0981	COG2801	Transposase and inactivated derivatives
BAOM_0983	COG0589	response to stress
BAOM_0987	COG0318	PFAM AMP-dependent synthetase and ligase
BAOM_0989	COG4152	abc transporter atp-binding protein
BAOM_0990	COG1668	transmembrane transport
BAOM_0991	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
BAOM_0994	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BAOM_0998	COG1846	Transcriptional regulator
BAOM_0999	COG4980	gas vesicle protein
BAOM_1003	COG0537	adenosine 5'-monophosphoramidase activity
BAOM_1004	COG1131	(ABC) transporter
BAOM_1005	COG4473	ABC transporter
BAOM_1006	COG2814	Major facilitator Superfamily
BAOM_1009	COG2329	Antibiotic biosynthesis monooxygenase
BAOM_1010	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
BAOM_1013	COG1309	transcriptional regulator
BAOM_1014	COG1511	domain protein
BAOM_1016	COG1234	tRNA 3'-trailer cleavage
BAOM_1017	COG0095	Lipoate-protein ligase
BAOM_1018	COG1028	Short-chain dehydrogenase reductase Sdr
BAOM_1019	COG2807	transmembrane transport
BAOM_1020	COG0318	PFAM AMP-dependent synthetase and ligase
BAOM_1021	COG1418	mRNA catabolic process
BAOM_1022	COG0501	Belongs to the peptidase M48B family
BAOM_1023	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BAOM_1028	COG0398	Pfam SNARE associated Golgi protein
BAOM_1029	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
BAOM_1030	COG1074	ATP-dependent DNA helicase activity
BAOM_1031	COG2258	MOSC domain
BAOM_1038	COG2311	Membrane
BAOM_1041	COG0367	asparagine synthase
BAOM_1042	COG1874	Beta-galactosidase
BAOM_1042	COG0366	Alpha amylase catalytic
BAOM_1043	COG0366	Alpha amylase catalytic
BAOM_1044	COG0346	lactoylglutathione lyase activity
BAOM_1045	COG1609	Transcriptional regulator
BAOM_1046	COG1028	Short-chain dehydrogenase reductase Sdr
BAOM_1049	COG1666	GTP binding
BAOM_1051	COG1307	EDD domain protein, DegV family
BAOM_1053	COG3162	membrane
BAOM_1054	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BAOM_1055	COG0517	IMP dehydrogenase activity
BAOM_1059	COG0561	phosphatase activity
BAOM_1061	COG1073	alpha beta
BAOM_1062	COG2151	metal-sulfur cluster biosynthetic enzyme
BAOM_1064	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BAOM_1065	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
BAOM_1066	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
BAOM_1067	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
BAOM_1069	COG0505	Belongs to the CarA family
BAOM_1071	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
BAOM_1073	COG1309	transcriptional regulator
BAOM_1078	COG3361	conserved protein (COG2071)
BAOM_1080	COG0110	maltose O-acetyltransferase activity
BAOM_1087	COG5002	protein histidine kinase activity
BAOM_1087	COG3850	Histidine kinase
BAOM_1088	COG0745	RESPONSE REGULATOR receiver
BAOM_1096	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BAOM_1103	COG0668	transmembrane transport
BAOM_1105	COG1074	ATP-dependent DNA helicase activity
BAOM_1106	COG3586	endonuclease activity
BAOM_1109	COG0494	nUDIX hydrolase
BAOM_1111	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BAOM_1112	COG0569	domain protein
BAOM_1115	COG2323	membrane
BAOM_1120	COG1024	Enoyl-CoA hydratase
BAOM_1124	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BAOM_1125	COG0584	glycerophosphoryl diester phosphodiesterase
BAOM_1130	COG1522	sequence-specific DNA binding
BAOM_1131	COG1335	isochorismatase
BAOM_1136	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
BAOM_1142	COG2267	carboxylic ester hydrolase activity
BAOM_1145	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BAOM_1146	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BAOM_1148	COG5504	Zn-dependent protease
BAOM_1151	COG0180	Tryptophanyl-tRNA synthetase
BAOM_1153	COG1393	Belongs to the ArsC family
BAOM_1154	COG4862	establishment of competence for transformation
BAOM_1155	COG1454	alcohol dehydrogenase
BAOM_1159	COG1280	lysine exporter protein (LysE YggA)
BAOM_1160	COG1378	Sugar-specific transcriptional regulator TrmB
BAOM_1162	COG1164	Oligoendopeptidase f
BAOM_1165	COG2346	COG2346, Truncated hemoglobins
BAOM_1166	COG0741	lytic transglycosylase activity
BAOM_1166	COG1196	nuclear chromosome segregation
BAOM_1166	COG0739	heme binding
BAOM_1167	COG4116	CYTH
BAOM_1168	COG2357	RelA SpoT domain protein
BAOM_1169	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
BAOM_1170	COG0564	pseudouridine synthase activity
BAOM_1171	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
BAOM_1172	COG2239	Acts as a magnesium transporter
BAOM_1183	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BAOM_1187	COG0210	DNA helicase
BAOM_1193	COG2382	esterase
BAOM_1194	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
BAOM_1196	COG0582	viral genome integration into host DNA
BAOM_1202	COG0475	glutathione-regulated potassium exporter activity
BAOM_1203	COG0747	negative chemotaxis
BAOM_1204	COG0601	transmembrane transport
BAOM_1205	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BAOM_1206	COG0444	Belongs to the ABC transporter superfamily
BAOM_1207	COG1124	(ABC) transporter
BAOM_1208	COG0534	Mate efflux family protein
BAOM_1210	COG1113	amino acid transport
BAOM_1215	COG0346	lactoylglutathione lyase activity
BAOM_1220	COG0604	alcohol dehydrogenase
BAOM_1222	COG3344	reverse transcriptase
BAOM_1231	COG0579	oxidoreductase
BAOM_1236	COG2271	Major facilitator Superfamily
BAOM_1238	COG1473	amidohydrolase
BAOM_1240	COG1846	Transcriptional regulator
BAOM_1241	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
BAOM_1243	COG0460	homoserine dehydrogenase
BAOM_1244	COG1988	membrane-bound metal-dependent
BAOM_1245	COG0861	Integral membrane protein TerC family
BAOM_1249	COG1309	transcriptional regulator
BAOM_1250	COG0477	Major facilitator Superfamily
BAOM_1258	COG0450	alkyl hydroperoxide reductase
BAOM_1263	COG2267	carboxylic ester hydrolase activity
BAOM_1264	COG2267	carboxylic ester hydrolase activity
BAOM_1266	COG2259	Doxx family
BAOM_1268	COG1028	Short-chain dehydrogenase reductase Sdr
BAOM_1269	COG2153	protein acetylation
BAOM_1272	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BAOM_1276	COG0431	NADPH-dependent FMN reductase
BAOM_1279	COG0277	FAD linked oxidase domain protein
BAOM_1284	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BAOM_1285	COG1840	ABC-type Fe3 transport system, periplasmic component
BAOM_1287	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
BAOM_1289	COG2814	Major facilitator Superfamily
BAOM_1290	COG1329	Transcriptional regulator
BAOM_1291	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
BAOM_1293	COG1113	amino acid transport
BAOM_1296	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
BAOM_1298	COG1028	Short-chain dehydrogenase reductase Sdr
BAOM_1299	COG3706	GGDEF domain
BAOM_1302	COG2205	protein histidine kinase activity
BAOM_1307	COG3842	ATPase activity
BAOM_1309	COG0561	phosphatase activity
BAOM_1310	COG2076	Multidrug Resistance protein
BAOM_1312	COG4999	Histidine kinase
BAOM_1312	COG3437	response regulator, receiver
BAOM_1312	COG2205	protein histidine kinase activity
BAOM_1312	COG3850	Histidine kinase
BAOM_1313	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
BAOM_1315	COG5002	protein histidine kinase activity
BAOM_1319	COG0697	spore germination
BAOM_1323	COG0840	transmembrane signaling receptor activity
BAOM_1325	COG3546	catalase activity
BAOM_1327	COG1280	lysine exporter protein (LysE YggA)
BAOM_1331	COG1280	lysine exporter protein (LysE YggA)
BAOM_1332	COG2814	Major facilitator Superfamily
BAOM_1333	COG2814	Major facilitator Superfamily
BAOM_1337	COG2030	dehydratase
BAOM_1342	COG2186	Transcriptional regulator
BAOM_1343	COG0277	FAD linked oxidase domain protein
BAOM_1344	COG0247	lactate metabolic process
BAOM_1345	COG1960	acyl-CoA dehydrogenase activity
BAOM_1346	COG2271	Major facilitator Superfamily
BAOM_1347	COG0318	PFAM AMP-dependent synthetase and ligase
BAOM_1348	COG1250	3-hydroxyacyl-CoA dehydrogenase
BAOM_1349	COG1250	3-hydroxyacyl-CoA dehydrogenase
BAOM_1350	COG1960	acyl-CoA dehydrogenase activity
BAOM_1351	COG0183	Belongs to the thiolase family
BAOM_1352	COG1024	Enoyl-CoA hydratase
BAOM_1353	COG1116	anion transmembrane transporter activity
BAOM_1356	COG1272	protein, Hemolysin III
BAOM_1358	COG0671	phosphoesterase, PA-phosphatase related
BAOM_1360	COG0697	spore germination
BAOM_1368	COG1960	acyl-CoA dehydrogenase activity
BAOM_1369	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
BAOM_1370	COG0318	PFAM AMP-dependent synthetase and ligase
BAOM_1371	COG1028	Short-chain dehydrogenase reductase Sdr
BAOM_1372	COG1028	Short-chain dehydrogenase reductase Sdr
BAOM_1373	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BAOM_1374	COG1316	TRANSCRIPTIONal
BAOM_1375	COG0778	Nitroreductase
BAOM_1376	COG0133	tryptophan synthase activity
BAOM_1377	COG0791	NLP P60 protein
BAOM_1377	COG3883	PFAM NLP P60 protein
BAOM_1380	COG5583	Uncharacterized small protein (DUF2292)
BAOM_1405	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
BAOM_1409	COG0582	viral genome integration into host DNA
BAOM_1410	COG2309	aminopeptidase activity
BAOM_1411	COG0492	ferredoxin-NADP+ reductase activity
BAOM_1412	COG1012	belongs to the aldehyde dehydrogenase family
BAOM_1413	COG0477	Major facilitator Superfamily
BAOM_1417	COG1607	acyl-coa hydrolase
BAOM_1419	COG4608	Belongs to the ABC transporter superfamily
BAOM_1420	COG0601	transmembrane transport
BAOM_1423	COG1363	Peptidase, m42
BAOM_1425	COG0706	membrane insertase activity
BAOM_1428	COG1725	Transcriptional regulator
BAOM_1429	COG1131	(ABC) transporter
BAOM_1431	COG1595	DNA-templated transcription, initiation
BAOM_1432	COG1278	Cold shock
BAOM_1433	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
BAOM_1434	COG4251	negative regulation of phosphorylation
BAOM_1434	COG3706	GGDEF domain
BAOM_1434	COG5001	Diguanylate cyclase
BAOM_1434	COG2203	Gaf domain
BAOM_1435	COG0772	Belongs to the SEDS family
BAOM_1438	COG0861	Integral membrane protein TerC family
BAOM_1439	COG1191	sigma factor activity
BAOM_1443	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BAOM_1444	COG1032	radical SAM domain protein
BAOM_1445	COG3594	Acyltransferase
BAOM_1449	COG2223	nitrite transmembrane transporter activity
BAOM_1450	COG1846	Transcriptional regulator
BAOM_1452	COG3949	Membrane
BAOM_1454	COG4873	Protein conserved in bacteria
BAOM_1456	COG1525	nuclease
BAOM_1457	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
BAOM_1458	COG0390	transport system, permease component
BAOM_1462	COG1028	Short-chain dehydrogenase reductase Sdr
BAOM_1463	COG2084	Dehydrogenase
BAOM_1464	COG0436	Aminotransferase
BAOM_1465	COG0598	Magnesium transport protein CorA
BAOM_1466	COG0598	Magnesium transport protein CorA
BAOM_1467	COG0835	chemotaxis
BAOM_1467	COG0784	Response regulator, receiver
BAOM_1470	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BAOM_1472	COG1408	metallophosphoesterase
BAOM_1473	COG0490	domain, Protein
BAOM_1473	COG0471	metal ion transport
BAOM_1474	COG2200	EAL domain
BAOM_1476	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BAOM_1477	COG4703	Protein of unknown function (DUF1797)
BAOM_1479	COG0517	IMP dehydrogenase activity
BAOM_1480	COG0477	Major facilitator Superfamily
BAOM_1481	COG0583	DNA-binding transcription factor activity
BAOM_1482	COG2171	N-acyltransferase activity
BAOM_1483	COG1473	amidohydrolase
BAOM_1484	COG0450	alkyl hydroperoxide reductase
BAOM_1485	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BAOM_1486	COG0569	domain protein
BAOM_1487	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BAOM_1489	COG0561	phosphatase activity
BAOM_1494	COG0022	dehydrogenase e1 component
BAOM_1500	COG1982	Orn Lys Arg decarboxylase major
BAOM_1502	COG4476	Belongs to the UPF0223 family
BAOM_1504	COG0512	Glutamine amidotransferase of anthranilate synthase
BAOM_1504	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
BAOM_1505	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
BAOM_1506	COG0134	indole-3-glycerol-phosphate synthase activity
BAOM_1510	COG4493	Belongs to the UPF0637 family
BAOM_1513	COG0483	inositol monophosphate 1-phosphatase activity
BAOM_1518	COG4896	Protein conserved in bacteria
BAOM_1520	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
BAOM_1521	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
BAOM_1522	COG4838	Belongs to the UPF0358 family
BAOM_1524	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
BAOM_1525	COG1612	heme a metabolic process
BAOM_1529	COG1845	cytochrome c oxidase, subunit III
BAOM_1531	COG3336	cytochrome c oxidase
BAOM_1534	COG2340	Cysteine-rich secretory protein family
BAOM_1538	COG3679	Belongs to the UPF0342 family
BAOM_1539	COG4471	UPF0298 protein
BAOM_1542	COG0742	ribosomal rna small subunit methyltransferase
BAOM_1543	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
BAOM_1544	COG3314	Sporulation integral membrane protein YlbJ
BAOM_1545	COG1752	Esterase of the alpha-beta hydrolase superfamily
BAOM_1546	COG3480	Lon protease (S16) C-terminal proteolytic domain
BAOM_1547	COG1323	Belongs to the UPF0348 family
BAOM_1548	COG1399	metal-binding, possibly nucleic acid-binding protein
BAOM_1550	COG1024	Enoyl-CoA hydratase
BAOM_1553	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BAOM_1555	COG4365	Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
BAOM_1556	COG2001	Belongs to the MraZ family
BAOM_1560	COG0768	penicillin binding
BAOM_1561	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BAOM_1562	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BAOM_1563	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
BAOM_1564	COG0772	Belongs to the SEDS family
BAOM_1565	COG0812	UDP-N-acetylmuramate dehydrogenase activity
BAOM_1566	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
BAOM_1567	COG0849	cell division
BAOM_1568	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
BAOM_1570	COG1191	sigma factor activity
BAOM_1571	COG1191	sigma factor activity
BAOM_1572	COG1873	PFAM PRC-barrel domain
BAOM_1574	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
BAOM_1575	COG1799	cell septum assembly
BAOM_1576	COG0762	integral membrane protein
BAOM_1577	COG2302	S4 RNA-binding domain
BAOM_1578	COG3599	regulation of cell shape
BAOM_1582	COG0564	pseudouridine synthase activity
BAOM_1583	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
BAOM_1584	COG2233	PERMEase
BAOM_1585	COG0540	Belongs to the ATCase OTCase family
BAOM_1586	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
BAOM_1588	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
BAOM_1589	COG0543	2 iron, 2 sulfur cluster binding
BAOM_1590	COG0167	dihydroorotate dehydrogenase activity
BAOM_1591	COG0284	orotidine-5'-phosphate decarboxylase activity
BAOM_1592	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
BAOM_1593	COG0248	Ppx GppA phosphatase
BAOM_1594	COG1119	ATPase activity
BAOM_1596	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
BAOM_1597	COG1561	YicC-like family, N-terminal region
BAOM_1599	COG0194	GDP metabolic process
BAOM_1600	COG1758	RNA polymerase activity
BAOM_1601	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BAOM_1602	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
BAOM_1604	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
BAOM_1605	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
BAOM_1605	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
BAOM_1606	COG0820	rRNA (adenine-C2-)-methyltransferase activity
BAOM_1607	COG0631	protein serine/threonine phosphatase activity
BAOM_1608	COG0515	serine threonine protein kinase
BAOM_1608	COG2815	serine threonine protein kinase
BAOM_1610	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
BAOM_1611	COG1564	THIamine pyrophosphokinase
BAOM_1612	COG0227	Belongs to the bacterial ribosomal protein bL28 family
BAOM_1613	COG1302	Protein conserved in bacteria
BAOM_1614	COG1461	Dihydroxyacetone kinase
BAOM_1615	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
BAOM_1616	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
BAOM_1617	COG1349	DNA-binding transcription factor activity
BAOM_1618	COG0416	fatty acid biosynthetic process
BAOM_1619	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
BAOM_1620	COG1028	Short-chain dehydrogenase reductase Sdr
BAOM_1621	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BAOM_1622	COG0571	ribonuclease III activity
BAOM_1623	COG1196	nuclear chromosome segregation
BAOM_1624	COG0552	protein localization to endoplasmic reticulum
BAOM_1626	COG1131	(ABC) transporter
BAOM_1629	COG0714	Associated with various cellular activities
BAOM_1634	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
BAOM_1636	COG1837	Belongs to the UPF0109 family
BAOM_1638	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
BAOM_1639	COG0336	Belongs to the RNA methyltransferase TrmD family
BAOM_1640	COG0335	large ribosomal subunit rRNA binding
BAOM_1643	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
BAOM_1645	COG2257	FlhB HrpN YscU SpaS Family
BAOM_1647	COG0045	succinate-CoA ligase (ADP-forming) activity
BAOM_1648	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
BAOM_1649	COG0758	DNA mediated transformation
BAOM_1650	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BAOM_1652	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
BAOM_1653	COG4974	Belongs to the 'phage' integrase family
BAOM_1655	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
BAOM_1656	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
BAOM_1657	COG1815	bacterial-type flagellum-dependent cell motility
BAOM_1658	COG1558	bacterial-type flagellum-dependent cell motility
BAOM_1659	COG1677	Flagellar hook-basal body complex protein FliE
BAOM_1660	COG1766	The M ring may be actively involved in energy transduction
BAOM_1661	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BAOM_1662	COG1317	bacterial-type flagellum organization
BAOM_1663	COG1157	protein secretion by the type III secretion system
BAOM_1664	COG2882	bacterial-type flagellum organization
BAOM_1667	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
BAOM_1669	COG1582	Flagellar protein (FlbD)
BAOM_1670	COG1580	Controls the rotational direction of flagella during chemotaxis
BAOM_1671	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BAOM_1672	COG1776	CheC inhibitor of MCP methylation
BAOM_1672	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BAOM_1673	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BAOM_1673	COG1776	CheC inhibitor of MCP methylation
BAOM_1674	COG2201	protein-glutamate methylesterase activity
BAOM_1675	COG3190	flagellar
BAOM_1676	COG1338	Plays a role in the flagellum-specific transport system
BAOM_1677	COG1987	bacterial-type flagellum assembly
BAOM_1678	COG1684	flagellar biosynthetic protein fliR
BAOM_1679	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
BAOM_1680	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
BAOM_1681	COG1419	protein localization to endoplasmic reticulum
BAOM_1682	COG0455	bacterial-type flagellum organization
BAOM_1683	COG2201	protein-glutamate methylesterase activity
BAOM_1684	COG0643	Histidine kinase
BAOM_1684	COG2198	Histidine kinase
BAOM_1685	COG0835	chemotaxis
BAOM_1686	COG1776	CheC inhibitor of MCP methylation
BAOM_1687	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
BAOM_1688	COG1191	sigma factor activity
BAOM_1690	COG0052	Belongs to the universal ribosomal protein uS2 family
BAOM_1692	COG0528	UMP kinase activity
BAOM_1695	COG4589	Belongs to the CDS family
BAOM_1696	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
BAOM_1697	COG0750	zinc metalloprotease
BAOM_1700	COG2176	DNA-directed DNA polymerase activity
BAOM_1701	COG0779	Required for maturation of 30S ribosomal subunits
BAOM_1702	COG0195	Participates in both transcription termination and antitermination
BAOM_1703	COG2740	Nucleic-acid-binding protein implicated in transcription termination
BAOM_1704	COG1358	cellular component organization or biogenesis
BAOM_1706	COG1550	Protein conserved in bacteria
BAOM_1707	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
BAOM_1708	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
BAOM_1709	COG0196	riboflavin kinase activity
BAOM_1710	COG1185	polyribonucleotide nucleotidyltransferase activity
BAOM_1711	COG0726	polysaccharide deacetylase
BAOM_1712	COG0612	Peptidase, M16
BAOM_1713	COG1873	PFAM PRC-barrel domain
BAOM_1714	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BAOM_1715	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BAOM_1716	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BAOM_1717	COG0527	aspartate kinase activity
BAOM_1719	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BAOM_1720	COG0740	serine-type endopeptidase activity
BAOM_1722	COG4980	gas vesicle protein
BAOM_1722	COG1674	ftsk spoiiie
BAOM_1728	COG0612	Peptidase, M16
BAOM_1729	COG0612	Peptidase, M16
BAOM_1730	COG0300	oxidoreductase activity
BAOM_1735	COG1426	Protein conserved in bacteria
BAOM_1736	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BAOM_1737	COG1546	Belongs to the CinA family
BAOM_1737	COG1058	Belongs to the CinA family
BAOM_1740	COG1692	metallophosphoesterase
BAOM_1741	COG2359	stage V sporulation protein S
BAOM_1743	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
BAOM_1743	COG0674	pyruvate-flavodoxin oxidoreductase activity
BAOM_1744	COG1013	pyruvate-flavodoxin oxidoreductase activity
BAOM_1746	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
BAOM_1747	COG4550	Control of competence regulator ComK, YlbF/YmcA
BAOM_1749	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
BAOM_1750	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
BAOM_1751	COG2066	Belongs to the glutaminase family
BAOM_1753	COG1028	Short-chain dehydrogenase reductase Sdr
BAOM_1754	COG0534	Mate efflux family protein
BAOM_1757	COG1960	acyl-CoA dehydrogenase activity
BAOM_1761	COG1960	acyl-CoA dehydrogenase activity
BAOM_1762	COG1028	Short-chain dehydrogenase reductase Sdr
BAOM_1764	COG1309	transcriptional regulator
BAOM_1766	COG0318	PFAM AMP-dependent synthetase and ligase
BAOM_1767	COG0559	Belongs to the binding-protein-dependent transport system permease family
BAOM_1770	COG0410	ABC transporter
BAOM_1772	COG0583	DNA-binding transcription factor activity
BAOM_1773	COG0067	glutamate synthase
BAOM_1773	COG0069	glutamate synthase activity
BAOM_1773	COG0070	glutamate synthase
BAOM_1774	COG0493	'glutamate synthase
BAOM_1780	COG4682	membrane
BAOM_1781	COG0069	glutamate synthase activity
BAOM_1782	COG0028	Belongs to the TPP enzyme family
BAOM_1783	COG1012	belongs to the aldehyde dehydrogenase family
BAOM_1788	COG0028	Belongs to the TPP enzyme family
BAOM_1790	COG3853	Toxic anion resistance protein (TelA)
BAOM_1792	COG0720	synthase
BAOM_1795	COG0697	spore germination
BAOM_1798	COG0531	amino acid
BAOM_1800	COG0531	amino acid
BAOM_1801	COG3361	conserved protein (COG2071)
BAOM_1802	COG0069	glutamate synthase activity
BAOM_1803	COG0069	glutamate synthase activity
BAOM_1803	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
BAOM_1807	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BAOM_1811	COG0569	domain protein
BAOM_1817	COG0398	Pfam SNARE associated Golgi protein
BAOM_1820	COG1607	acyl-coa hydrolase
BAOM_1821	COG0640	Transcriptional regulator
BAOM_1822	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
BAOM_1823	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BAOM_1827	COG3835	regulator
BAOM_1828	COG1929	Belongs to the glycerate kinase type-1 family
BAOM_1829	COG2610	gluconate transmembrane transporter activity
BAOM_1830	COG1704	LemA family
BAOM_1834	COG4175	Glycine betaine
BAOM_1834	COG0517	IMP dehydrogenase activity
BAOM_1835	COG0583	DNA-binding transcription factor activity
BAOM_1836	COG1607	acyl-coa hydrolase
BAOM_1838	COG2271	Major facilitator Superfamily
BAOM_1839	COG1473	amidohydrolase
BAOM_1841	COG4191	Histidine kinase
BAOM_1842	COG2172	sigma factor antagonist activity
BAOM_1845	COG3829	transcription factor binding
BAOM_1845	COG3290	protein histidine kinase activity
BAOM_1846	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
BAOM_1847	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
BAOM_1848	COG0492	ferredoxin-NADP+ reductase activity
BAOM_1849	COG0840	transmembrane signaling receptor activity
BAOM_1851	COG1473	amidohydrolase
BAOM_1853	COG4948	Mandelate Racemase Muconate Lactonizing
BAOM_1854	COG3949	Membrane
BAOM_1856	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
BAOM_1857	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
BAOM_1858	COG2814	Major facilitator Superfamily
BAOM_1859	COG1414	Transcriptional regulator
BAOM_1860	COG0179	Fumarylacetoacetate (FAA) hydrolase
BAOM_1863	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BAOM_1864	COG2323	membrane
BAOM_1866	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
BAOM_1867	COG1923	regulation of RNA biosynthetic process
BAOM_1868	COG0464	growth
BAOM_1869	COG2860	membrane
BAOM_1870	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BAOM_1871	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
BAOM_1872	COG0789	Transcriptional regulator
BAOM_1873	COG0174	glutamine synthetase
BAOM_1884	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
BAOM_1886	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
BAOM_1887	COG4224	UPF0291 protein
BAOM_1896	COG0785	Cytochrome C biogenesis protein
BAOM_1897	COG2201	protein-glutamate methylesterase activity
BAOM_1898	COG4846	Membrane protein involved in cytochrome C biogenesis
BAOM_1901	COG0420	3'-5' exonuclease activity
BAOM_1902	COG0419	ATPase involved in DNA repair
BAOM_1903	COG0071	Belongs to the small heat shock protein (HSP20) family
BAOM_1907	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
BAOM_1908	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BAOM_1912	COG0824	Thioesterase
BAOM_1914	COG4841	protein insertion into membrane
BAOM_1915	COG3093	addiction module antidote protein HigA
BAOM_1916	COG0840	transmembrane signaling receptor activity
BAOM_1917	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
BAOM_1919	COG1832	CoA-binding protein
BAOM_1920	COG0187	DNA topoisomerase II activity
BAOM_1921	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BAOM_1925	COG1309	transcriptional regulator
BAOM_1926	COG1960	acyl-CoA dehydrogenase activity
BAOM_1927	COG0318	PFAM AMP-dependent synthetase and ligase
BAOM_1928	COG0439	Biotin carboxylase
BAOM_1929	COG0511	ligase activity, forming carbon-carbon bonds
BAOM_1930	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BAOM_1931	COG1024	Enoyl-CoA hydratase
BAOM_1932	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
BAOM_1933	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
BAOM_1938	COG1647	Serine aminopeptidase, S33
BAOM_1940	COG0840	transmembrane signaling receptor activity
BAOM_1942	COG4191	Histidine kinase
BAOM_1945	COG2318	DinB family
BAOM_1954	COG0281	malic enzyme
BAOM_1959	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BAOM_1960	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
BAOM_1961	COG2814	Major facilitator Superfamily
BAOM_1965	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
BAOM_1966	COG0840	transmembrane signaling receptor activity
BAOM_1967	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BAOM_1969	COG1278	Cold shock
BAOM_1970	COG1309	transcriptional regulator
BAOM_1971	COG1033	growth of symbiont in host cell
BAOM_1971	COG2409	Drug exporters of the RND superfamily
BAOM_1973	COG1970	mechanosensitive ion channel activity
BAOM_1974	COG2205	protein histidine kinase activity
BAOM_1975	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BAOM_1976	COG2022	thiamine diphosphate biosynthetic process
BAOM_1977	COG2104	thiamine diphosphate biosynthetic process
BAOM_1978	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BAOM_1979	COG0352	thiamine-phosphate diphosphorylase activity
BAOM_1986	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BAOM_1987	COG3739	integral membrane protein
BAOM_1988	COG3655	Transcriptional regulator
BAOM_1996	COG0596	Alpha beta hydrolase
BAOM_1997	COG0671	phosphoesterase, PA-phosphatase related
BAOM_2001	COG3011	Protein conserved in bacteria
BAOM_2008	COG1388	LysM domain
BAOM_2008	COG0791	NLP P60 protein
BAOM_2009	COG2814	Major facilitator Superfamily
BAOM_2010	COG2843	Capsule synthesis protein
BAOM_2011	COG0436	Aminotransferase
BAOM_2012	COG1388	LysM domain
BAOM_2012	COG3858	chitin binding
BAOM_2016	COG0741	lytic transglycosylase activity
BAOM_2018	COG0590	tRNA wobble adenosine to inosine editing
BAOM_2019	COG2233	PERMEase
BAOM_2020	COG2233	PERMEase
BAOM_2021	COG5002	protein histidine kinase activity
BAOM_2022	COG0745	RESPONSE REGULATOR receiver
BAOM_2023	COG0666	response to abiotic stimulus
BAOM_2027	COG1785	Belongs to the alkaline phosphatase family
BAOM_2028	COG1380	Effector of murein hydrolase LrgA
BAOM_2029	COG1346	cytolysis
BAOM_2034	COG0411	ABC transporter
BAOM_2036	COG0559	Belongs to the binding-protein-dependent transport system permease family
BAOM_2043	COG5444	nuclease activity
BAOM_2047	COG1349	DNA-binding transcription factor activity
BAOM_2050	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BAOM_2052	COG3842	ATPase activity
BAOM_2053	COG1840	ABC-type Fe3 transport system, periplasmic component
BAOM_2057	COG0778	Nitroreductase
BAOM_2059	COG2323	membrane
BAOM_2062	COG0183	Belongs to the thiolase family
BAOM_2064	COG0028	Belongs to the TPP enzyme family
BAOM_2065	COG0179	Fumarylacetoacetate (FAA) hydrolase
BAOM_2067	COG0463	Glycosyl transferase, family 2
BAOM_2068	COG4485	Bacterial membrane protein, YfhO
BAOM_2069	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BAOM_2070	COG3829	transcription factor binding
BAOM_2070	COG3290	protein histidine kinase activity
BAOM_2073	COG2814	Major facilitator Superfamily
BAOM_2074	COG0702	epimerase
BAOM_2081	COG3689	TIGRFAM TIGR03943 family protein
BAOM_2082	COG0701	Predicted permease
BAOM_2084	COG0701	Predicted permease
BAOM_2085	COG0803	Belongs to the bacterial solute-binding protein 9 family
BAOM_2087	COG0523	cobalamin synthesis protein
BAOM_2088	COG0267	Belongs to the bacterial ribosomal protein bL33 family
BAOM_2089	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
BAOM_2092	COG0523	cobalamin synthesis protein
BAOM_2093	COG0521	Mo-molybdopterin cofactor biosynthetic process
BAOM_2094	COG4974	Belongs to the 'phage' integrase family
BAOM_2102	COG3344	reverse transcriptase
BAOM_2103	COG1114	Component of the transport system for branched-chain amino acids
BAOM_2116	COG3706	GGDEF domain
BAOM_2119	COG5001	Diguanylate cyclase
BAOM_2119	COG3300	MHYT domain
BAOM_2120	COG0302	gtp cyclohydrolase
BAOM_2121	COG4502	5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
BAOM_2122	COG0492	ferredoxin-NADP+ reductase activity
BAOM_2122	COG3118	belongs to the thioredoxin family
BAOM_2127	COG1937	Protein conserved in bacteria
BAOM_2128	COG2608	mercury ion transmembrane transporter activity
BAOM_2129	COG2217	Heavy metal translocating P-type atpase
BAOM_2133	COG2814	Major facilitator Superfamily
BAOM_2134	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BAOM_2135	COG4294	response to UV
BAOM_2136	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BAOM_2138	COG1533	DNA photolyase activity
BAOM_2140	COG3871	stress protein (general stress protein 26)
BAOM_2143	COG4191	Histidine kinase
BAOM_2146	COG3832	glyoxalase III activity
BAOM_2148	COG0697	spore germination
BAOM_2149	COG0697	spore germination
BAOM_2150	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BAOM_2151	COG3973	AAA domain
BAOM_2153	COG1278	Cold shock
BAOM_2157	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
BAOM_2158	COG1414	Transcriptional regulator
BAOM_2164	COG2814	Major facilitator Superfamily
BAOM_2167	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BAOM_2168	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BAOM_2171	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
BAOM_2173	COG0318	PFAM AMP-dependent synthetase and ligase
BAOM_2174	COG1960	acyl-CoA dehydrogenase activity
BAOM_2176	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BAOM_2177	COG1024	Enoyl-CoA hydratase
BAOM_2178	COG1024	Enoyl-CoA hydratase
BAOM_2180	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BAOM_2181	COG0183	Belongs to the thiolase family
BAOM_2182	COG0427	acetyl-CoA hydrolase
BAOM_2183	COG1960	acyl-CoA dehydrogenase activity
BAOM_2184	COG1028	Short-chain dehydrogenase reductase Sdr
BAOM_2185	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BAOM_2186	COG0318	PFAM AMP-dependent synthetase and ligase
BAOM_2187	COG1960	acyl-CoA dehydrogenase activity
BAOM_2189	COG0183	Belongs to the thiolase family
BAOM_2196	COG1028	Short-chain dehydrogenase reductase Sdr
BAOM_2198	COG1028	Short-chain dehydrogenase reductase Sdr
BAOM_2199	COG0778	Nitroreductase
BAOM_2200	COG1733	regulation of RNA biosynthetic process
BAOM_2203	COG0473	3-isopropylmalate dehydrogenase activity
BAOM_2204	COG1742	UPF0060 membrane protein
BAOM_2207	COG1024	Enoyl-CoA hydratase
BAOM_2208	COG2610	gluconate transmembrane transporter activity
BAOM_2209	COG0584	glycerophosphoryl diester phosphodiesterase
BAOM_2212	COG1388	LysM domain
BAOM_2212	COG0791	NLP P60 protein
BAOM_2214	COG5002	protein histidine kinase activity
BAOM_2215	COG0745	RESPONSE REGULATOR receiver
BAOM_2217	COG1388	LysM domain
BAOM_2219	COG0791	NLP P60 protein
BAOM_2219	COG1388	LysM domain
BAOM_2221	COG0730	response to heat
BAOM_2223	COG3773	Cell wall hydrolase
BAOM_2224	COG0740	serine-type endopeptidase activity
BAOM_2228	COG2814	Major facilitator Superfamily
BAOM_2229	COG1309	transcriptional regulator
BAOM_2231	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
BAOM_2232	COG0582	viral genome integration into host DNA
BAOM_2234	COG1846	Transcriptional regulator
BAOM_2237	COG0477	Major facilitator Superfamily
BAOM_2238	COG0477	Major facilitator Superfamily
BAOM_2239	COG0778	Nitroreductase
BAOM_2251	COG1114	Component of the transport system for branched-chain amino acids
BAOM_2256	COG3290	protein histidine kinase activity
BAOM_2257	COG4565	transcriptional regulatory protein
BAOM_2259	COG0471	metal ion transport
BAOM_2260	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
BAOM_2262	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BAOM_2263	COG2733	membrane
BAOM_2264	COG0789	Transcriptional regulator
BAOM_2264	COG4978	Transcriptional regulator
BAOM_2265	COG4978	Transcriptional regulator
BAOM_2265	COG0789	Transcriptional regulator
BAOM_2266	COG4978	Transcriptional regulator
BAOM_2266	COG0789	Transcriptional regulator
BAOM_2267	COG1811	Na channel or pump
BAOM_2268	COG0583	DNA-binding transcription factor activity
BAOM_2271	COG3153	acetyltransferase
BAOM_2271	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BAOM_2275	COG1012	belongs to the aldehyde dehydrogenase family
BAOM_2278	COG3706	GGDEF domain
BAOM_2285	COG0531	amino acid
BAOM_2286	COG0697	spore germination
BAOM_2294	COG2368	4-hydroxyphenylacetate
BAOM_2295	COG2368	4-hydroxyphenylacetate
BAOM_2296	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BAOM_2298	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BAOM_2299	COG2011	ABC-type metal ion transport system permease component
BAOM_2300	COG1960	acyl-CoA dehydrogenase activity
BAOM_2301	COG1454	alcohol dehydrogenase
BAOM_2302	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
BAOM_2303	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
BAOM_2304	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
BAOM_2307	COG2801	Transposase and inactivated derivatives
BAOM_2314	COG0076	glutamate decarboxylase activity
BAOM_2315	COG2801	Transposase and inactivated derivatives
BAOM_2316	COG2801	Transposase and inactivated derivatives
BAOM_2319	COG1131	(ABC) transporter
BAOM_2333	COG4372	Transposase
BAOM_2340	COG2217	Heavy metal translocating P-type atpase
BAOM_2342	COG1587	Uroporphyrinogen-III synthase
BAOM_2343	COG2226	methyltransferase
BAOM_2344	COG2226	methyltransferase
BAOM_2352	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
BAOM_2360	COG1357	PFAM Pentapeptide repeats (8 copies)
BAOM_2361	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BAOM_2362	COG1960	acyl-CoA dehydrogenase activity
BAOM_2369	COG0446	pyridine nucleotide-disulphide oxidoreductase
BAOM_2374	COG4974	Belongs to the 'phage' integrase family
BAOM_2376	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BAOM_2377	COG2801	Transposase and inactivated derivatives
BAOM_2380	COG1193	negative regulation of DNA recombination
BAOM_2382	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BAOM_2383	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
BAOM_2390	COG3316	Transposase and inactivated derivatives
BAOM_2397	COG1476	TRANSCRIPTIONal
BAOM_2398	COG1476	TRANSCRIPTIONal
BAOM_2401	COG3316	Transposase and inactivated derivatives
BAOM_2408	COG1404	Belongs to the peptidase S8 family
BAOM_2415	COG0561	phosphatase activity
BAOM_2420	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BAOM_2420	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BAOM_2424	COG3478	Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082)
BAOM_2427	COG0028	Belongs to the TPP enzyme family
BAOM_2429	COG2801	Transposase and inactivated derivatives
BAOM_2430	COG1335	isochorismatase
BAOM_2433	COG2801	Transposase and inactivated derivatives
BAOM_2435	COG1388	LysM domain
BAOM_2435	COG3942	CHAP domain
BAOM_2437	COG0561	phosphatase activity
BAOM_2438	COG0024	Methionine aminopeptidase
BAOM_2439	COG1574	metal-dependent hydrolase with the TIM-barrel fold
BAOM_2440	COG3773	Cell wall hydrolase
BAOM_2441	COG0519	Catalyzes the synthesis of GMP from XMP
BAOM_2442	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BAOM_2443	COG0765	amino acid transport
BAOM_2444	COG1126	abc transporter atp-binding protein
BAOM_2446	COG0667	Aldo Keto reductase
BAOM_2448	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
BAOM_2448	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
BAOM_2450	COG0791	NLP P60 protein
BAOM_2450	COG1388	LysM domain
BAOM_2451	COG2072	flavoprotein involved in K transport
BAOM_2457	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BAOM_2460	COG2124	cytochrome p450
BAOM_2466	COG0076	glutamate decarboxylase activity
BAOM_2475	COG1741	Belongs to the pirin family
BAOM_2477	COG0517	IMP dehydrogenase activity
BAOM_2479	COG4807	Protein conserved in bacteria
BAOM_2480	COG5002	protein histidine kinase activity
BAOM_2493	COG2801	Transposase and inactivated derivatives
BAOM_2496	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
BAOM_2498	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
BAOM_2499	COG0277	FAD linked oxidase domain protein
BAOM_2501	COG3608	succinylglutamate desuccinylase aspartoacylase
BAOM_2501	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
BAOM_2502	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
BAOM_2504	COG1529	Aldehyde oxidase and xanthine dehydrogenase
BAOM_2506	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BAOM_2507	COG0784	Response regulator, receiver
BAOM_2508	COG4191	Histidine kinase
BAOM_2509	COG1115	amino acid carrier protein
BAOM_2513	COG1607	acyl-coa hydrolase
BAOM_2515	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
BAOM_2516	COG0668	transmembrane transport
BAOM_2521	COG3773	Cell wall hydrolase
BAOM_2522	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BAOM_2523	COG3829	transcription factor binding
BAOM_2523	COG3290	protein histidine kinase activity
BAOM_2526	COG1012	belongs to the aldehyde dehydrogenase family
BAOM_2527	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
BAOM_2528	COG3316	Transposase and inactivated derivatives
BAOM_2529	COG0861	Integral membrane protein TerC family
BAOM_2533	COG2204	response regulator
BAOM_2537	COG2207	Transcriptional regulator
BAOM_2537	COG1917	Cupin 2, conserved barrel domain protein
BAOM_2538	COG0697	spore germination
BAOM_2540	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BAOM_2541	COG1403	HNH endonuclease
BAOM_2543	COG3973	AAA domain
BAOM_2544	COG0791	NLP P60 protein
BAOM_2544	COG1388	LysM domain
BAOM_2545	COG0542	response to heat
BAOM_2546	COG0427	acetyl-CoA hydrolase
BAOM_2548	COG0582	viral genome integration into host DNA
BAOM_2549	COG0475	glutathione-regulated potassium exporter activity
BAOM_2551	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BAOM_2552	COG0778	Nitroreductase
BAOM_2554	COG0708	Exodeoxyribonuclease III
BAOM_2555	COG0297	glycogen (starch) synthase activity
BAOM_2556	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
BAOM_2557	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
BAOM_2558	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
BAOM_2562	COG3663	DNA glycosylase
BAOM_2563	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
BAOM_2564	COG0267	Belongs to the bacterial ribosomal protein bL33 family
BAOM_2565	COG0523	cobalamin synthesis protein
BAOM_2567	COG0701	Predicted permease
BAOM_2570	COG0431	NADPH-dependent FMN reductase
BAOM_2571	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
BAOM_2572	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
BAOM_2573	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BAOM_2574	COG1028	Short-chain dehydrogenase reductase Sdr
BAOM_2577	COG0789	Transcriptional regulator
BAOM_2578	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BAOM_2579	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
BAOM_2581	COG1380	Effector of murein hydrolase LrgA
BAOM_2582	COG1346	cytolysis
BAOM_2583	COG2910	NAD(P)H-binding
BAOM_2586	COG0667	Aldo Keto reductase
BAOM_2594	COG3316	Transposase and inactivated derivatives
BAOM_2597	COG3655	Transcriptional regulator
BAOM_2599	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BAOM_2604	COG2259	Doxx family
BAOM_2605	COG1024	Enoyl-CoA hydratase
BAOM_2607	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
BAOM_2608	COG4319	ketosteroid isomerase
BAOM_2634	COG2271	Major facilitator Superfamily
BAOM_2637	COG1876	peptidase activity
BAOM_2650	COG4974	Belongs to the 'phage' integrase family
BAOM_2652	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BAOM_2654	COG1164	Oligoendopeptidase f
BAOM_2656	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BAOM_2657	COG2116	formate transmembrane transporter activity
BAOM_2659	COG1376	ErfK ybiS ycfS ynhG family protein
BAOM_2665	COG0590	tRNA wobble adenosine to inosine editing
BAOM_2667	COG2706	6-phosphogluconolactonase activity
BAOM_2668	COG2706	6-phosphogluconolactonase activity
BAOM_2676	COG1231	oxidoreductase activity
BAOM_2678	COG1279	arginine transmembrane transporter activity
BAOM_2679	COG1064	alcohol dehydrogenase
BAOM_2680	COG0789	Transcriptional regulator
BAOM_2684	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BAOM_2687	COG0247	lactate metabolic process
BAOM_2687	COG2181	nitrate reductase activity
BAOM_2688	COG2030	dehydratase
BAOM_2689	COG1024	Enoyl-CoA hydratase
BAOM_2690	COG1960	acyl-CoA dehydrogenase activity
BAOM_2693	COG1376	ErfK ybiS ycfS ynhG family protein
BAOM_2695	COG0583	DNA-binding transcription factor activity
BAOM_2696	COG2271	Major facilitator Superfamily
BAOM_2699	COG0456	acetyltransferase
BAOM_2705	COG2801	Transposase and inactivated derivatives
BAOM_2706	COG0477	Major facilitator Superfamily
BAOM_2707	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BAOM_2708	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BAOM_2712	COG0815	Transfers the fatty acyl group on membrane lipoproteins
BAOM_2714	COG1113	amino acid transport
BAOM_2717	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
BAOM_2719	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
BAOM_2721	COG3316	Transposase and inactivated derivatives
BAOM_2724	COG0730	response to heat
BAOM_2725	COG0425	Belongs to the sulfur carrier protein TusA family
BAOM_2726	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BAOM_2726	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BAOM_2728	COG2210	Belongs to the sulfur carrier protein TusA family
BAOM_2729	COG0425	Belongs to the sulfur carrier protein TusA family
BAOM_2729	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BAOM_2730	COG0425	Belongs to the sulfur carrier protein TusA family
BAOM_2730	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BAOM_2732	COG1937	Protein conserved in bacteria
BAOM_2733	COG1028	Short-chain dehydrogenase reductase Sdr
BAOM_2735	COG1028	Short-chain dehydrogenase reductase Sdr
BAOM_2737	COG1309	transcriptional regulator
BAOM_2739	COG3858	chitin binding
BAOM_2739	COG1388	LysM domain
BAOM_2744	COG0277	FAD linked oxidase domain protein
BAOM_2745	COG0277	FAD linked oxidase domain protein
BAOM_2746	COG1028	Short-chain dehydrogenase reductase Sdr
BAOM_2747	COG2814	Major facilitator Superfamily
BAOM_2753	COG0583	DNA-binding transcription factor activity
BAOM_2754	COG3316	Transposase and inactivated derivatives
BAOM_2756	COG2801	Transposase and inactivated derivatives
BAOM_2757	COG1819	glycosyl
BAOM_2762	COG2801	Transposase and inactivated derivatives
BAOM_2764	COG0477	Major facilitator Superfamily
BAOM_2765	COG2814	Major facilitator Superfamily
BAOM_2766	COG3973	AAA domain
BAOM_2768	COG0456	acetyltransferase
BAOM_2769	COG1846	Transcriptional regulator
BAOM_2770	COG2153	protein acetylation
BAOM_2777	COG1388	LysM domain
BAOM_2777	COG3942	CHAP domain
BAOM_2790	COG0183	Belongs to the thiolase family
BAOM_2793	COG1595	DNA-templated transcription, initiation
BAOM_2796	COG1028	Short-chain dehydrogenase reductase Sdr
BAOM_2798	COG2271	Major facilitator Superfamily
BAOM_2802	COG2271	Major facilitator Superfamily
BAOM_2804	COG0318	PFAM AMP-dependent synthetase and ligase
BAOM_2805	COG0583	DNA-binding transcription factor activity
BAOM_2813	COG1834	amidinotransferase
BAOM_2815	COG0300	oxidoreductase activity
BAOM_2817	COG0179	Fumarylacetoacetate (FAA) hydrolase
BAOM_2818	COG1757	Na H antiporter
BAOM_2819	COG1757	Na H antiporter
BAOM_2820	COG1027	Aspartate ammonia-lyase
BAOM_2821	COG0252	asparaginase activity
BAOM_2822	COG0252	asparaginase activity
BAOM_2823	COG1396	sequence-specific DNA binding
BAOM_2825	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BAOM_2828	COG2226	methyltransferase
BAOM_2830	COG5002	protein histidine kinase activity
BAOM_2835	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
BAOM_2836	COG2197	response regulator
BAOM_2837	COG3239	Fatty acid desaturase
BAOM_2840	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BAOM_2842	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
BAOM_2845	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BAOM_2845	COG1199	ATP-dependent helicase activity
BAOM_2847	COG0004	ammonium transporteR
BAOM_2849	COG2261	transglycosylase associated protein
BAOM_2852	COG0247	lactate metabolic process
BAOM_2852	COG2181	nitrate reductase activity
BAOM_2853	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
BAOM_2854	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
BAOM_2855	COG1960	acyl-CoA dehydrogenase activity
BAOM_2856	COG0183	Belongs to the thiolase family
BAOM_2857	COG1309	transcriptional regulator
BAOM_2862	COG1388	LysM domain
BAOM_2862	COG3584	3D domain protein
BAOM_2869	COG1113	amino acid transport
BAOM_2870	COG0456	acetyltransferase
BAOM_2871	COG3153	acetyltransferase
BAOM_2871	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BAOM_2873	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
BAOM_2874	COG1984	allophanate hydrolase subunit 2
BAOM_2876	COG2076	Multidrug Resistance protein
BAOM_2877	COG2076	Multidrug Resistance protein
BAOM_2878	COG1408	metallophosphoesterase
BAOM_2884	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
BAOM_2885	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
BAOM_2886	COG1454	alcohol dehydrogenase
BAOM_2888	COG1349	DNA-binding transcription factor activity
BAOM_2890	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BAOM_2891	COG0730	response to heat
BAOM_2892	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BAOM_2892	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BAOM_2893	COG0425	Belongs to the sulfur carrier protein TusA family
BAOM_2893	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BAOM_2894	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BAOM_2895	COG2210	Belongs to the sulfur carrier protein TusA family
BAOM_2896	COG0425	Belongs to the sulfur carrier protein TusA family
BAOM_2897	COG1937	Protein conserved in bacteria
BAOM_2899	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BAOM_2900	COG0400	carboxylic ester hydrolase activity
BAOM_2901	COG0346	lactoylglutathione lyase activity
BAOM_2902	COG0346	lactoylglutathione lyase activity
BAOM_2903	COG1764	response to oxidative stress
BAOM_2909	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
BAOM_2910	COG1733	regulation of RNA biosynthetic process
BAOM_2913	COG1506	peptidase
BAOM_2913	COG4946	Tricorn protease homolog
BAOM_2913	COG0823	Involved in the tonB-independent uptake of proteins
BAOM_2914	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
BAOM_2916	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
BAOM_2917	COG1131	(ABC) transporter
BAOM_2920	COG5002	protein histidine kinase activity
BAOM_2923	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BAOM_2926	COG0514	ATP-dependent DNA helicase (RecQ)
BAOM_2934	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BAOM_2935	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
BAOM_2936	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
BAOM_2940	COG4112	unkown
BAOM_2941	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BAOM_2944	COG1372	Participates in initiation and elongation during chromosome replication
BAOM_2944	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BAOM_2945	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BAOM_2948	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BAOM_2950	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BAOM_2951	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BAOM_2971	COG3584	3D domain protein
BAOM_2974	COG0587	DNA-directed DNA polymerase activity
BAOM_2975	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
BAOM_2976	COG0358	DNA primase activity
BAOM_2978	COG0305	Participates in initiation and elongation during chromosome replication
BAOM_2980	COG2887	Belongs to the helicase family. UvrD subfamily
BAOM_2999	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
BAOM_3018	COG0582	viral genome integration into host DNA
BAOM_3088	COG0210	DNA helicase
BAOM_3089	COG1674	ftsk spoiiie
BAOM_3095	COG0739	heme binding
BAOM_3100	COG0776	regulation of translation
BAOM_3101	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
BAOM_3123	COG0582	viral genome integration into host DNA
BAOM_3131	COG0739	heme binding
BAOM_3131	COG1196	nuclear chromosome segregation
BAOM_3131	COG0741	lytic transglycosylase activity
BAOM_3135	COG2433	Pfam Transposase IS66
BAOM_3142	COG3409	Peptidoglycan-binding domain 1 protein
BAOM_3142	COG5632	N-Acetylmuramoyl-L-alanine amidase
BAOM_3152	COG0514	ATP-dependent DNA helicase (RecQ)
BAOM_3155	COG3546	catalase activity
BAOM_3156	COG2996	Protein conserved in bacteria
BAOM_3158	COG1247	-acetyltransferase
BAOM_3160	COG0488	(ABC) transporter
BAOM_3162	COG2268	Band 7 protein
BAOM_3164	COG0039	L-malate dehydrogenase activity
BAOM_3165	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
BAOM_3166	COG4576	ethanolamine utilization protein EutN carboxysome structural protein Ccml
BAOM_3169	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
BAOM_3170	COG1012	belongs to the aldehyde dehydrogenase family
BAOM_3170	COG1454	alcohol dehydrogenase
BAOM_3171	COG4816	utilization protein
BAOM_3172	COG4302	ethanolamine ammonia-lyase activity
BAOM_3173	COG4303	Ethanolamine ammonia lyase large subunit
BAOM_3175	COG4917	ethanolamine utilization protein
BAOM_3176	COG4810	utilization protein
BAOM_3177	COG3192	ethanolamine utilization protein
BAOM_3182	COG1268	BioY protein
BAOM_3184	COG1272	protein, Hemolysin III
BAOM_3185	COG3773	Cell wall hydrolase
BAOM_3186	COG3344	reverse transcriptase
BAOM_3187	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BAOM_3187	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BAOM_3187	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BAOM_3188	COG0508	dehydrogenase complex catalyzes the overall conversion of
BAOM_3189	COG0567	Dehydrogenase, E1 component
BAOM_3190	COG3384	dioxygenase
BAOM_3191	COG0726	polysaccharide deacetylase
BAOM_3192	COG0646	methionine synthase
BAOM_3192	COG1410	methionine synthase
BAOM_3193	COG0646	methionine synthase
BAOM_3193	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
BAOM_3194	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
BAOM_3196	COG0288	reversible hydration of carbon dioxide
BAOM_3201	COG1380	Effector of murein hydrolase LrgA
BAOM_3202	COG1346	cytolysis
BAOM_3203	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BAOM_3204	COG0601	transmembrane transport
BAOM_3205	COG0747	negative chemotaxis
BAOM_3206	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
BAOM_3208	COG4608	Belongs to the ABC transporter superfamily
BAOM_3209	COG4608	Belongs to the ABC transporter superfamily
BAOM_3210	COG4974	Belongs to the 'phage' integrase family
BAOM_3213	COG0534	Mate efflux family protein
BAOM_3215	COG2340	Cysteine-rich secretory protein family
BAOM_3217	COG5002	protein histidine kinase activity
BAOM_3218	COG0745	RESPONSE REGULATOR receiver
BAOM_3221	COG0523	cobalamin synthesis protein
BAOM_3222	COG1802	Transcriptional regulator
BAOM_3223	COG0697	spore germination
BAOM_3224	COG0436	Aminotransferase
BAOM_3225	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BAOM_3226	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
BAOM_3227	COG1316	TRANSCRIPTIONal
BAOM_3228	COG0793	Belongs to the peptidase S41A family
BAOM_3228	COG3409	Peptidoglycan-binding domain 1 protein
BAOM_3229	COG0813	purine-nucleoside phosphorylase activity
BAOM_3236	COG4326	sporulation control protein
BAOM_3239	COG4479	Belongs to the UPF0346 family
BAOM_3244	COG3436	PFAM IS66 Orf2 family protein
BAOM_3245	COG4372	Transposase
BAOM_3254	COG0346	lactoylglutathione lyase activity
BAOM_3257	COG2801	Transposase and inactivated derivatives
BAOM_3259	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
BAOM_3260	COG0778	Nitroreductase
BAOM_3261	COG1733	regulation of RNA biosynthetic process
BAOM_3268	COG2801	Transposase and inactivated derivatives
BAOM_3272	COG1695	Transcriptional regulator
BAOM_3276	COG1595	DNA-templated transcription, initiation
BAOM_3278	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BAOM_3281	COG0583	DNA-binding transcription factor activity
BAOM_3283	COG1414	Transcriptional regulator
BAOM_3286	COG1984	allophanate hydrolase subunit 2
BAOM_3287	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
BAOM_3288	COG4336	lyase activity
BAOM_3289	COG1914	H( )-stimulated, divalent metal cation uptake system
BAOM_3290	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
BAOM_3296	COG0697	spore germination
BAOM_3297	COG4129	membrane
BAOM_3298	COG2814	Major facilitator Superfamily
BAOM_3299	COG0583	DNA-binding transcription factor activity
BAOM_3301	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
BAOM_3305	COG4129	membrane
BAOM_3310	COG0824	Thioesterase
BAOM_3312	COG3246	L-lysine catabolic process to acetate
BAOM_3313	COG1028	Short-chain dehydrogenase reductase Sdr
BAOM_3318	COG0346	lactoylglutathione lyase activity
BAOM_3320	COG1250	3-hydroxyacyl-CoA dehydrogenase
BAOM_3329	COG5444	nuclease activity
BAOM_3330	COG5444	nuclease activity
BAOM_3334	COG1509	lysine 2,3-aminomutase activity
BAOM_3335	COG3829	transcription factor binding
BAOM_3336	COG0456	acetyltransferase
BAOM_3337	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BAOM_3338	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
BAOM_3339	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
BAOM_3340	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
BAOM_3342	COG0352	thiamine-phosphate diphosphorylase activity
BAOM_3342	COG0351	phosphomethylpyrimidine kinase
BAOM_3343	COG0753	catalase activity
BAOM_3345	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BAOM_3346	COG1840	ABC-type Fe3 transport system, periplasmic component
BAOM_3348	COG1176	ABC-type spermidine putrescine transport system, permease component I
BAOM_3351	COG5002	protein histidine kinase activity
BAOM_3354	COG1619	proteins homologs of microcin C7 resistance protein MccF
BAOM_3356	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BAOM_3360	COG2755	lipolytic protein G-D-S-L family
BAOM_3361	COG1999	signal sequence binding
BAOM_3362	COG1307	EDD domain protein, DegV family
BAOM_3364	COG0805	protein transport
BAOM_3365	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BAOM_3366	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
BAOM_3368	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
BAOM_3369	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
BAOM_3371	COG0861	Integral membrane protein TerC family
BAOM_3375	COG2521	methyltransferase
BAOM_3375	COG2136	Putative SAM-dependent methyltransferase
BAOM_3377	COG0129	dihydroxy-acid dehydratase activity
BAOM_3378	COG1413	lyase activity
BAOM_3380	COG0488	(ABC) transporter
BAOM_3381	COG0386	Belongs to the glutathione peroxidase family
BAOM_3383	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
BAOM_3384	COG1321	iron dependent repressor
BAOM_3386	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAOM_3387	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAOM_3388	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BAOM_3389	COG0662	Cupin 2, conserved barrel domain protein
BAOM_3389	COG2207	Transcriptional regulator
BAOM_3391	COG0583	DNA-binding transcription factor activity
BAOM_3392	COG2855	membrane
BAOM_3394	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BAOM_3395	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BAOM_3395	COG0551	DNA topoisomerase type I activity
BAOM_3405	COG0778	Nitroreductase
BAOM_3409	COG3852	Histidine kinase
BAOM_3410	COG0604	alcohol dehydrogenase
BAOM_3413	COG0583	DNA-binding transcription factor activity
BAOM_3414	COG0477	Major facilitator Superfamily
BAOM_3416	COG1924	4 iron, 4 sulfur cluster binding
BAOM_3423	COG0737	Belongs to the 5'-nucleotidase family
BAOM_3424	COG1393	Belongs to the ArsC family
BAOM_3426	COG0346	lactoylglutathione lyase activity
BAOM_3431	COG0519	Catalyzes the synthesis of GMP from XMP
BAOM_3431	COG0518	GMP synthase (glutamine-hydrolyzing) activity
BAOM_3433	COG1028	Short-chain dehydrogenase reductase Sdr
BAOM_3435	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BAOM_3436	COG1116	anion transmembrane transporter activity
BAOM_3439	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
BAOM_3440	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
BAOM_3447	COG1959	2 iron, 2 sulfur cluster binding
BAOM_3450	COG0328	RNA-DNA hybrid ribonuclease activity
BAOM_3451	COG0328	RNA-DNA hybrid ribonuclease activity
BAOM_3454	COG0531	amino acid
BAOM_3455	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BAOM_3456	COG3338	carbonate dehydratase activity
BAOM_3457	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
BAOM_3459	COG1755	Isoprenylcysteine carboxyl methyltransferase
BAOM_3460	COG3424	synthase
BAOM_3465	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
BAOM_3467	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
BAOM_3468	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BAOM_3469	COG1199	ATP-dependent helicase activity
BAOM_3470	COG1278	Cold shock
BAOM_3472	COG0776	regulation of translation
BAOM_3478	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
BAOM_3481	COG0116	Belongs to the methyltransferase superfamily
BAOM_3483	COG3599	regulation of cell shape
BAOM_3486	COG3359	exonuclease
BAOM_3487	COG1205	dead DEAH box helicase
BAOM_3487	COG1111	helicase
BAOM_3493	COG3331	DNA recombination
BAOM_3494	COG4499	WXG100 protein secretion system (Wss), protein YukC
BAOM_3494	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BAOM_3496	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
BAOM_3497	COG3935	DnaD domain protein
BAOM_3498	COG0436	Aminotransferase
BAOM_3501	COG1199	ATP-dependent helicase activity
BAOM_3501	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BAOM_3502	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
BAOM_3506	COG0617	tRNA 3'-terminal CCA addition
BAOM_3507	COG0438	transferase activity, transferring glycosyl groups
BAOM_3511	COG1694	Mazg nucleotide pyrophosphohydrolase
BAOM_3512	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BAOM_3514	COG2738	Putative neutral zinc metallopeptidase
BAOM_3516	COG4347	Protein of unknown function (DUF1405)
BAOM_3521	COG5582	Belongs to the UPF0302 family
BAOM_3522	COG0457	Tetratricopeptide repeat
BAOM_3523	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
BAOM_3524	COG0287	Prephenate dehydrogenase
BAOM_3525	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
BAOM_3526	COG4401	Chorismate mutase type I
BAOM_3527	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
BAOM_3528	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
BAOM_3529	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
BAOM_3530	COG0105	UTP biosynthetic process
BAOM_3531	COG0142	geranyltranstransferase activity
BAOM_3532	COG2226	methyltransferase
BAOM_3533	COG0142	geranyltranstransferase activity
BAOM_3535	COG0302	gtp cyclohydrolase
BAOM_3536	COG0776	regulation of translation
BAOM_3537	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
BAOM_3541	COG1160	GTP binding
BAOM_3546	COG1304	FMN binding
BAOM_3547	COG0539	negative regulation of cytoplasmic translation
BAOM_3548	COG0204	Acyl-transferase
BAOM_3549	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
BAOM_3552	COG2959	enzyme of heme biosynthesis
BAOM_3553	COG3409	Peptidoglycan-binding domain 1 protein
BAOM_3553	COG3773	Cell wall hydrolase
BAOM_3554	COG2339	peptidase activity
BAOM_3556	COG0492	ferredoxin-NADP+ reductase activity
BAOM_3557	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
BAOM_3558	COG4862	establishment of competence for transformation
BAOM_3559	COG1408	metallophosphoesterase
BAOM_3561	COG1388	LysM domain
BAOM_3562	COG1266	CAAX protease self-immunity
BAOM_3563	COG0514	ATP-dependent DNA helicase (RecQ)
BAOM_3564	COG4955	Helix-turn-helix domain
BAOM_3565	COG1141	Ferredoxin
BAOM_3566	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
BAOM_3567	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BAOM_3569	COG5002	protein histidine kinase activity
BAOM_3570	COG0745	RESPONSE REGULATOR receiver
BAOM_3571	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BAOM_3572	COG1333	cytochrome c biogenesis protein
BAOM_3573	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BAOM_3574	COG1187	pseudouridine synthase activity
BAOM_3575	COG0700	Nucleoside recognition
BAOM_3576	COG2715	membrane protein required for spore maturation
BAOM_3577	COG1686	Belongs to the peptidase S11 family
BAOM_3578	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
BAOM_3580	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
BAOM_3582	COG1547	Domain of unknown function (DUF309)
BAOM_3584	COG4086	secreted protein
BAOM_3586	COG1785	Belongs to the alkaline phosphatase family
BAOM_3588	COG0697	spore germination
BAOM_3593	COG2172	sigma factor antagonist activity
BAOM_3595	COG1686	Belongs to the peptidase S11 family
BAOM_3599	COG4974	Belongs to the 'phage' integrase family
BAOM_3601	COG0735	belongs to the Fur family
BAOM_3602	COG1300	Membrane
BAOM_3603	COG1379	DNA repair
BAOM_3606	COG0667	Aldo Keto reductase
BAOM_3608	COG1073	alpha beta
BAOM_3609	COG4918	Iron-sulphur cluster biosynthesis
BAOM_3615	COG0300	oxidoreductase activity
BAOM_3616	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BAOM_3618	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BAOM_3619	COG1902	pentaerythritol trinitrate reductase activity
BAOM_3620	COG0789	Transcriptional regulator
BAOM_3624	COG3275	phosphorelay sensor kinase activity
BAOM_3625	COG3279	Response regulator of the LytR AlgR family
BAOM_3626	COG1966	Carbon starvation protein
BAOM_3629	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
BAOM_3631	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
BAOM_3632	COG2195	Cleaves the N-terminal amino acid of tripeptides
BAOM_3633	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
BAOM_3634	COG0346	lactoylglutathione lyase activity
BAOM_3635	COG4129	membrane
BAOM_3636	COG1126	abc transporter atp-binding protein
BAOM_3637	COG0765	amino acid transport
BAOM_3638	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BAOM_3641	COG1703	isobutyryl-CoA mutase activity
BAOM_3642	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
BAOM_3642	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
BAOM_3643	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
BAOM_3644	COG0508	dehydrogenase complex catalyzes the overall conversion of
BAOM_3645	COG0022	dehydrogenase e1 component
BAOM_3646	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
BAOM_3647	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BAOM_3649	COG3290	protein histidine kinase activity
BAOM_3649	COG3829	transcription factor binding
BAOM_3651	COG0584	glycerophosphoryl diester phosphodiesterase
BAOM_3653	COG0745	RESPONSE REGULATOR receiver
BAOM_3655	COG0750	zinc metalloprotease
BAOM_3656	COG0497	DNA recombination
BAOM_3657	COG1438	arginine binding
BAOM_3658	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
BAOM_3659	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
BAOM_3663	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
BAOM_3665	COG1302	Protein conserved in bacteria
BAOM_3666	COG0439	Biotin carboxylase
BAOM_3667	COG0511	ligase activity, forming carbon-carbon bonds
BAOM_3675	COG3854	ATPases associated with a variety of cellular activities
BAOM_3685	COG5444	nuclease activity
BAOM_3689	COG1511	domain protein
BAOM_3690	COG0433	COG0433 Predicted ATPase
BAOM_3690	COG1674	ftsk spoiiie
BAOM_3691	COG4499	WXG100 protein secretion system (Wss), protein YukC
BAOM_3692	COG5417	Belongs to the EsaB family
BAOM_3693	COG4842	Belongs to the WXG100 family
BAOM_3695	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
BAOM_3696	COG0006	proline dipeptidase activity
BAOM_3697	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
BAOM_3699	COG3872	metal-dependent enzyme
BAOM_3701	COG1752	Esterase of the alpha-beta hydrolase superfamily
BAOM_3702	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BAOM_3704	COG1063	alcohol dehydrogenase
BAOM_3708	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
BAOM_3715	COG5002	protein histidine kinase activity
BAOM_3720	COG1131	(ABC) transporter
BAOM_3722	COG4372	Transposase
BAOM_3723	COG3436	PFAM IS66 Orf2 family protein
BAOM_3726	COG0583	DNA-binding transcription factor activity
BAOM_3733	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BAOM_3735	COG0583	DNA-binding transcription factor activity
BAOM_3737	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAOM_3738	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAOM_3739	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BAOM_3745	COG2801	Transposase and inactivated derivatives
BAOM_3746	COG0693	protein deglycase activity
BAOM_3747	COG2378	regulation of single-species biofilm formation
BAOM_3748	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BAOM_3750	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BAOM_3751	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
BAOM_3752	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
BAOM_3753	COG0404	The glycine cleavage system catalyzes the degradation of glycine
BAOM_3754	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
BAOM_3761	COG4537	Required for transformation and DNA binding
BAOM_3762	COG1459	type II secretion system
BAOM_3763	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BAOM_3767	COG1473	amidohydrolase
BAOM_3768	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BAOM_3772	COG1368	sulfuric ester hydrolase activity
BAOM_3773	COG1940	carbohydrate kinase activity
BAOM_3776	COG0457	Tetratricopeptide repeat
BAOM_3776	COG0705	Rhomboid family
BAOM_3778	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
BAOM_3779	COG0267	Belongs to the bacterial ribosomal protein bL33 family
BAOM_3785	COG0573	inorganic phosphate transmembrane transporter activity
BAOM_3786	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
BAOM_3788	COG0477	Major facilitator Superfamily
BAOM_3790	COG2839	Protein conserved in bacteria
BAOM_3792	COG5521	maltodextrose utilization protein MalA
BAOM_3793	COG0840	transmembrane signaling receptor activity
BAOM_3795	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
BAOM_3796	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
BAOM_3797	COG4709	membrane
BAOM_3798	COG5663	Belongs to the 5'(3')-deoxyribonucleotidase family
BAOM_3799	COG0735	belongs to the Fur family
BAOM_3800	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BAOM_3801	COG1121	(ABC) transporter
BAOM_3803	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
BAOM_3804	COG0513	Belongs to the DEAD box helicase family
BAOM_3807	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
BAOM_3808	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
BAOM_3809	COG2384	SAM-dependent methyltransferase
BAOM_3810	COG2010	Cytochrome c
BAOM_3812	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BAOM_3813	COG0358	DNA primase activity
BAOM_3815	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
BAOM_3816	COG0517	IMP dehydrogenase activity
BAOM_3817	COG0751	glycine-tRNA ligase activity
BAOM_3818	COG0752	glycyl-tRNA synthetase alpha subunit
BAOM_3819	COG1381	Involved in DNA repair and RecF pathway recombination
BAOM_3821	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
BAOM_3822	COG0295	cytidine deaminase activity
BAOM_3823	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
BAOM_3824	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
BAOM_3825	COG1480	7TM receptor with intracellular HD hydrolase
BAOM_3826	COG1702	phosphate starvation-inducible protein PhoH
BAOM_3830	COG4864	UPF0365 protein
BAOM_3831	COG1030	water channel activity
BAOM_3832	COG1610	YqeY-like protein
BAOM_3833	COG0828	Belongs to the bacterial ribosomal protein bS21 family
BAOM_3834	COG1283	sodium-dependent phosphate transmembrane transporter activity
BAOM_3836	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
BAOM_3837	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
BAOM_3838	COG1385	rRNA (uridine-N3-)-methyltransferase activity
BAOM_3839	COG2264	protein methyltransferase activity
BAOM_3841	COG0443	Heat shock 70 kDa protein
BAOM_3842	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
BAOM_3844	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BAOM_3845	COG0481	GTPase activity
BAOM_3847	COG0860	N-Acetylmuramoyl-L-alanine amidase
BAOM_3848	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
BAOM_3849	COG0268	Binds directly to 16S ribosomal RNA
BAOM_3851	COG1466	dna polymerase III delta subunit
BAOM_3853	COG2333	competence protein COMEC
BAOM_3853	COG0658	competence protein
BAOM_3854	COG2131	deaminase
BAOM_3855	COG1555	photosystem II stabilization
BAOM_3855	COG1596	polysaccharide export
BAOM_3856	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BAOM_3857	COG2226	methyltransferase
BAOM_3858	COG0799	negative regulation of ribosome biogenesis
BAOM_3859	COG1713	HD superfamily hydrolase involved in NAD metabolism
BAOM_3860	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
BAOM_3861	COG1534	Rna-binding protein
BAOM_3863	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
BAOM_3864	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
BAOM_3867	COG0688	phosphatidylethanolamine metabolic process
BAOM_3868	COG1183	phosphatidylcholine synthase activity
BAOM_3869	COG1216	Glycosyl transferase, family 2
BAOM_3871	COG1940	carbohydrate kinase activity
BAOM_3872	COG1191	sigma factor activity
BAOM_3874	COG0438	transferase activity, transferring glycosyl groups
BAOM_3875	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
BAOM_3878	COG0626	cystathionine gamma-synthase activity
BAOM_3879	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
BAOM_3880	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
BAOM_3881	COG2226	methyltransferase
BAOM_3888	COG0768	penicillin binding
BAOM_3890	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BAOM_3894	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
BAOM_3895	COG3906	Belongs to the UPF0473 family
BAOM_3896	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
BAOM_3897	COG4472	Bacterial protein of unknown function (DUF965)
BAOM_3898	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
BAOM_3899	COG0628	permease
BAOM_3901	COG3881	PFAM PRC-barrel domain
BAOM_3902	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
BAOM_3905	COG1104	cysteine desulfurase activity
BAOM_3906	COG1959	2 iron, 2 sulfur cluster binding
BAOM_3907	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
BAOM_3909	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
BAOM_3912	COG2814	Major facilitator Superfamily
BAOM_3915	COG0411	ABC transporter
BAOM_3921	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
BAOM_3923	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
BAOM_3924	COG0124	histidyl-tRNA synthetase
BAOM_3926	COG0860	N-Acetylmuramoyl-L-alanine amidase
BAOM_3926	COG3103	Sh3 type 3 domain protein
BAOM_3926	COG4991	sh3 domain protein
BAOM_3927	COG1490	D-aminoacyl-tRNA deacylase activity
BAOM_3928	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BAOM_3929	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
BAOM_3930	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
BAOM_3930	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
BAOM_3931	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BAOM_3931	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BAOM_3933	COG2244	polysaccharide biosynthetic process
BAOM_3934	COG2323	membrane
BAOM_3937	COG1862	Preprotein translocase
BAOM_3939	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
BAOM_3948	COG0157	Belongs to the NadC ModD family
BAOM_3949	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
BAOM_3950	COG1104	cysteine desulfurase activity
BAOM_3951	COG1827	regulation of RNA biosynthetic process
BAOM_3952	COG0077	Prephenate dehydratase
BAOM_3953	COG4492	Belongs to the UPF0735 family
BAOM_3954	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
BAOM_3955	COG3290	protein histidine kinase activity
BAOM_3956	COG0211	Belongs to the bacterial ribosomal protein bL27 family
BAOM_3957	COG2868	ribosomal protein
BAOM_3959	COG1530	ribonuclease E activity
BAOM_3960	COG1994	Peptidase M50
BAOM_3961	COG0739	heme binding
BAOM_3962	COG2894	cell division
BAOM_3965	COG1792	Involved in formation and maintenance of cell shape
BAOM_3966	COG1077	Cell shape determining protein MreB Mrl
BAOM_3967	COG2003	Belongs to the UPF0758 family
BAOM_3973	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
BAOM_3975	COG1459	type II secretion system
BAOM_3983	COG0285	dihydrofolate synthase activity
BAOM_3984	COG0189	ligase activity
BAOM_3987	COG0525	valine-tRNA ligase activity
BAOM_3989	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
BAOM_3990	COG1388	LysM domain
BAOM_3990	COG1388	LysM domain
BAOM_3993	COG1136	(ABC) transporter
BAOM_3994	COG2205	protein histidine kinase activity
BAOM_3995	COG0745	RESPONSE REGULATOR receiver
BAOM_3996	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
BAOM_3997	COG0113	porphobilinogen synthase activity
BAOM_4000	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BAOM_4002	COG0218	Necessary for normal cell division and for the maintenance of normal septation
BAOM_4003	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
BAOM_4004	COG1067	ATP-dependent peptidase activity
BAOM_4004	COG0470	DNA polymerase III
BAOM_4006	COG0544	peptidyl-prolyl cis-trans isomerase activity
BAOM_4008	COG0066	3-isopropylmalate dehydratase activity
BAOM_4009	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
BAOM_4011	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BAOM_4012	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
BAOM_4013	COG0440	acetolactate synthase activity
BAOM_4014	COG0028	Belongs to the TPP enzyme family
BAOM_4018	COG0622	Phosphoesterase
BAOM_4019	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
BAOM_4020	COG5401	PFAM Sporulation and spore germination
BAOM_4022	COG2197	response regulator
BAOM_4024	COG0824	Thioesterase
BAOM_4025	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
BAOM_4026	COG1053	succinate dehydrogenase
BAOM_4027	COG2009	succinate dehydrogenase
BAOM_4028	COG1719	4-vinyl reductase, 4VR
BAOM_4031	COG3118	belongs to the thioredoxin family
BAOM_4032	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
BAOM_4033	COG2086	electron transfer activity
BAOM_4034	COG1024	Enoyl-CoA hydratase
BAOM_4035	COG1309	transcriptional regulator
BAOM_4036	COG0318	PFAM AMP-dependent synthetase and ligase
BAOM_4037	COG3766	membrane
BAOM_4038	COG1193	negative regulation of DNA recombination
BAOM_4039	COG1796	DNA polymerase
BAOM_4039	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
BAOM_4040	COG1286	toxin biosynthetic process
BAOM_4041	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
BAOM_4042	COG1039	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
BAOM_4043	COG0072	phenylalanine-tRNA ligase activity
BAOM_4043	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BAOM_4044	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
BAOM_4045	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BAOM_4048	COG1363	Peptidase, m42
BAOM_4051	COG1027	Aspartate ammonia-lyase
BAOM_4052	COG0398	Pfam SNARE associated Golgi protein
BAOM_4053	COG3326	Membrane
BAOM_4054	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
BAOM_4056	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
BAOM_4058	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
BAOM_4061	COG1484	DNA-dependent DNA replication
BAOM_4062	COG3611	Membrane attachment protein
BAOM_4063	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
BAOM_4064	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
BAOM_4065	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BAOM_4066	COG0237	dephospho-CoA kinase activity
BAOM_4067	COG1971	Probably functions as a manganese efflux pump
BAOM_4068	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
BAOM_4069	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BAOM_4069	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BAOM_4071	COG0330	HflC and HflK could
BAOM_4072	COG5002	protein histidine kinase activity
BAOM_4073	COG0745	RESPONSE REGULATOR receiver
BAOM_4076	COG0538	isocitrate dehydrogenase activity
BAOM_4077	COG0372	Belongs to the citrate synthase family
BAOM_4079	COG2707	UPF0756 membrane protein
BAOM_4080	COG0628	permease
BAOM_4081	COG2224	Isocitrate lyase
BAOM_4082	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
BAOM_4084	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
BAOM_4085	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
BAOM_4086	COG0438	transferase activity, transferring glycosyl groups
BAOM_4087	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BAOM_4088	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
BAOM_4089	COG1210	Utp--glucose-1-phosphate uridylyltransferase
BAOM_4090	COG3030	protein affecting phage T7 exclusion by the F plasmid
BAOM_4092	COG0205	6-phosphofructokinase activity
BAOM_4093	COG0825	malonyl-CoA metabolic process
BAOM_4094	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
BAOM_4095	COG2186	Transcriptional regulator
BAOM_4096	COG0281	malic enzyme
BAOM_4097	COG0587	DNA-directed DNA polymerase activity
BAOM_4100	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
BAOM_4102	COG4109	DRTGG domain
BAOM_4104	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
BAOM_4105	COG0006	proline dipeptidase activity
BAOM_4106	COG0589	response to stress
BAOM_4107	COG0165	Argininosuccinate lyase
BAOM_4108	COG0137	argininosuccinate synthase activity
BAOM_4111	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BAOM_4112	COG0827	DNA restriction-modification system
BAOM_4113	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
BAOM_4114	COG3874	Sporulation protein YtfJ
BAOM_4116	COG1714	RDD family
BAOM_4117	COG0616	signal peptide processing
BAOM_4118	COG2962	Rard protein
BAOM_4119	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BAOM_4121	COG0301	tRNA thio-modification
BAOM_4122	COG1104	cysteine desulfurase activity
BAOM_4123	COG4477	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
BAOM_4124	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
BAOM_4125	COG1309	transcriptional regulator
BAOM_4126	COG1956	GAF domain-containing protein
BAOM_4127	COG2199	diguanylate cyclase activity
BAOM_4127	COG2203	Gaf domain
BAOM_4128	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
BAOM_4129	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
BAOM_4132	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BAOM_4133	COG0454	-acetyltransferase
BAOM_4134	COG0517	IMP dehydrogenase activity
BAOM_4135	COG0123	including yeast histone deacetylase and acetoin utilization protein
BAOM_4136	COG1609	Transcriptional regulator
BAOM_4137	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
BAOM_4137	COG1605	Chorismate mutase
BAOM_4138	COG0849	cell division
BAOM_4141	COG3118	belongs to the thioredoxin family
BAOM_4142	COG4980	gas vesicle protein
BAOM_4144	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
BAOM_4145	COG1674	ftsk spoiiie
BAOM_4147	COG4848	Belongs to the UPF0354 family
BAOM_4148	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BAOM_4149	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
BAOM_4150	COG1363	Peptidase, m42
BAOM_4152	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BAOM_4153	COG0220	tRNA (guanine-N7-)-methyltransferase activity
BAOM_4154	COG0510	thiamine kinase activity
BAOM_4158	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BAOM_4159	COG0586	Pfam SNARE associated Golgi protein
BAOM_4163	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
BAOM_4167	COG1187	pseudouridine synthase activity
BAOM_4168	COG2244	polysaccharide biosynthetic process
BAOM_4169	COG2081	HI0933 family
BAOM_4174	COG3695	enzyme binding
BAOM_4176	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BAOM_4178	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
BAOM_4179	COG1522	sequence-specific DNA binding
BAOM_4180	COG0697	spore germination
BAOM_4183	COG1714	RDD family
BAOM_4184	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BAOM_4186	COG0495	leucyl-tRNA aminoacylation
BAOM_4188	COG1242	4 iron, 4 sulfur cluster binding
BAOM_4189	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
BAOM_4192	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BAOM_4193	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BAOM_4195	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BAOM_4196	COG4977	sequence-specific DNA binding
BAOM_4199	COG2267	carboxylic ester hydrolase activity
BAOM_4200	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
BAOM_4201	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
BAOM_4204	COG1506	peptidase
BAOM_4205	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BAOM_4206	COG1116	anion transmembrane transporter activity
BAOM_4207	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BAOM_4208	COG0494	nUDIX hydrolase
BAOM_4211	COG0783	Belongs to the Dps family
BAOM_4213	COG1854	S-ribosylhomocysteine lyase activity
BAOM_4214	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
BAOM_4218	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BAOM_4219	COG3290	protein histidine kinase activity
BAOM_4222	COG4948	Mandelate Racemase Muconate Lactonizing
BAOM_4223	COG0318	PFAM AMP-dependent synthetase and ligase
BAOM_4224	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
BAOM_4225	COG0596	Alpha beta hydrolase
BAOM_4226	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
BAOM_4227	COG1169	isochorismate synthase
BAOM_4228	COG1575	Belongs to the MenA family. Type 1 subfamily
BAOM_4256	COG1285	pathogenesis
BAOM_4258	COG4974	Belongs to the 'phage' integrase family
BAOM_4273	COG1131	(ABC) transporter
BAOM_4274	COG2205	protein histidine kinase activity
BAOM_4275	COG0745	RESPONSE REGULATOR receiver
BAOM_4277	COG2801	Transposase and inactivated derivatives
BAOM_4281	COG3443	Belongs to the bacterial solute-binding protein 9 family
BAOM_4282	COG1683	Conserved Protein
BAOM_4284	COG0531	amino acid
BAOM_4287	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BAOM_4288	COG0569	domain protein
BAOM_4291	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
BAOM_4292	COG2910	NAD(P)H-binding
BAOM_4293	COG1959	2 iron, 2 sulfur cluster binding
BAOM_4295	COG0582	viral genome integration into host DNA
BAOM_4296	COG0582	viral genome integration into host DNA
BAOM_4303	COG3773	Cell wall hydrolase
BAOM_4305	COG3852	Histidine kinase
BAOM_4306	COG0784	Response regulator, receiver
BAOM_4306	COG2205	protein histidine kinase activity
BAOM_4307	COG2814	Major facilitator Superfamily
BAOM_4308	COG3403	YqcI/YcgG family
BAOM_4309	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BAOM_4312	COG0179	Fumarylacetoacetate (FAA) hydrolase
BAOM_4314	COG2801	Transposase and inactivated derivatives
BAOM_4317	COG2259	Doxx family
BAOM_4318	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BAOM_4321	COG3384	dioxygenase
BAOM_4323	COG0579	oxidoreductase
BAOM_4324	COG1802	Transcriptional regulator
BAOM_4326	COG0746	molybdenum cofactor guanylyltransferase activity
BAOM_4327	COG0725	ABC transporter, periplasmic molybdate-binding protein
BAOM_4328	COG4149	molybdate abc transporter
BAOM_4329	COG3842	ATPase activity
BAOM_4330	COG3852	Histidine kinase
BAOM_4334	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
BAOM_4335	COG0314	molybdopterin synthase activity
BAOM_4337	COG0303	'Molybdopterin
BAOM_4338	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BAOM_4341	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
BAOM_4342	COG5609	conserved protein (DUF2294)
BAOM_4343	COG3383	formate dehydrogenase (NAD+) activity
BAOM_4344	COG2427	Protein of unknown function (DUF1641)
BAOM_4349	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BAOM_4350	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
BAOM_4354	COG1024	Enoyl-CoA hydratase
BAOM_4356	COG0840	transmembrane signaling receptor activity
BAOM_4361	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
BAOM_4362	COG0095	Lipoate-protein ligase
BAOM_4363	COG1247	-acetyltransferase
BAOM_4364	COG0583	DNA-binding transcription factor activity
BAOM_4366	COG0697	spore germination
BAOM_4367	COG3906	Belongs to the UPF0473 family
BAOM_4368	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
BAOM_4370	COG4208	sulfate ABC transporter
BAOM_4373	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
BAOM_4380	COG3185	4-Hydroxyphenylpyruvate dioxygenase
BAOM_4383	COG3339	Conserved Protein
BAOM_4384	COG5278	phosphoserine phosphatase activity
BAOM_4384	COG0840	transmembrane signaling receptor activity
BAOM_4388	COG0559	Belongs to the binding-protein-dependent transport system permease family
BAOM_4389	COG0683	leucine binding
BAOM_4390	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BAOM_4391	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAOM_4392	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAOM_4393	COG1120	ATPase activity
BAOM_4394	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
BAOM_4399	COG5002	protein histidine kinase activity
BAOM_4399	COG3850	Histidine kinase
BAOM_4401	COG1136	(ABC) transporter
BAOM_4402	COG0577	efflux transmembrane transporter activity
BAOM_4403	COG1320	monovalent cation:proton antiporter activity
BAOM_4404	COG2212	antiporter activity
BAOM_4405	COG1863	multisubunit Na H antiporter MnhE subunit
BAOM_4408	COG2111	Na H antiporter
BAOM_4411	COG0582	viral genome integration into host DNA
BAOM_4412	COG0322	excinuclease ABC activity
BAOM_4413	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
BAOM_4417	COG1012	belongs to the aldehyde dehydrogenase family
BAOM_4418	COG0506	proline dehydrogenase activity
BAOM_4420	COG0840	transmembrane signaling receptor activity
BAOM_4421	COG0753	catalase activity
BAOM_4423	COG2814	Major facilitator Superfamily
BAOM_4428	COG2814	Major facilitator Superfamily
BAOM_4429	COG1968	undecaprenyl-diphosphatase activity
BAOM_4431	COG1388	LysM domain
BAOM_4431	COG3858	chitin binding
BAOM_4432	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
BAOM_4435	COG1979	alcohol dehydrogenase
BAOM_4436	COG2155	Conserved Protein
BAOM_4437	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BAOM_4438	COG1098	S1 RNA binding domain
BAOM_4439	COG0733	neurotransmitter:sodium symporter activity
BAOM_4442	COG0436	Aminotransferase
BAOM_4443	COG1522	sequence-specific DNA binding
BAOM_4444	COG2267	carboxylic ester hydrolase activity
BAOM_4446	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
BAOM_4447	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
BAOM_4449	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BAOM_4451	COG5018	Exonuclease
BAOM_4452	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BAOM_4454	COG2050	protein possibly involved in aromatic compounds catabolism
BAOM_4457	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BAOM_4457	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BAOM_4460	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
BAOM_4461	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
BAOM_4463	COG3584	3D domain protein
BAOM_4466	COG0492	ferredoxin-NADP+ reductase activity
BAOM_4468	COG0697	spore germination
BAOM_4470	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
BAOM_4475	COG0316	Belongs to the HesB IscA family
BAOM_4477	COG4844	belongs to the
BAOM_4478	COG1252	NADH dehydrogenase
BAOM_4479	COG4837	Protein of unknown function (DUF1462)
BAOM_4480	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
BAOM_4481	COG0083	homoserine kinase activity
BAOM_4482	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
BAOM_4483	COG0460	homoserine dehydrogenase
BAOM_4485	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
BAOM_4486	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
BAOM_4487	COG0647	UMP catabolic process
BAOM_4488	COG2445	Protein of unknown function DUF86
BAOM_4489	COG2200	EAL domain
BAOM_4489	COG2199	diguanylate cyclase activity
BAOM_4489	COG3287	FIST C domain
BAOM_4492	COG4470	Protein conserved in bacteria
BAOM_4495	COG0739	heme binding
BAOM_4497	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
BAOM_4497	COG2199	diguanylate cyclase activity
BAOM_4498	COG3377	Domain of unknown function (DUF1805)
BAOM_4499	COG0737	Belongs to the 5'-nucleotidase family
BAOM_4500	COG0730	response to heat
BAOM_4501	COG1801	Protein of unknown function DUF72
BAOM_4502	COG0719	Fe-S assembly protein
BAOM_4503	COG0822	iron-sulfur transferase activity
BAOM_4504	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BAOM_4505	COG0719	Fe-S assembly protein
BAOM_4506	COG0396	ATPase activity
BAOM_4508	COG1464	Belongs to the NlpA lipoprotein family
BAOM_4509	COG2011	ABC-type metal ion transport system permease component
BAOM_4510	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BAOM_4512	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BAOM_4513	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
BAOM_4514	COG0509	glycine decarboxylation via glycine cleavage system
BAOM_4515	COG1393	Belongs to the ArsC family
BAOM_4516	COG1960	acyl-CoA dehydrogenase activity
BAOM_4517	COG0183	Belongs to the thiolase family
BAOM_4518	COG1024	Enoyl-CoA hydratase
BAOM_4518	COG1250	3-hydroxyacyl-CoA dehydrogenase
BAOM_4520	COG0772	Belongs to the SEDS family
BAOM_4521	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BAOM_4522	COG1321	iron dependent repressor
BAOM_4522	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BAOM_4523	COG1121	(ABC) transporter
BAOM_4524	COG0803	Belongs to the bacterial solute-binding protein 9 family
BAOM_4525	COG0833	amino acid
BAOM_4527	COG2076	Multidrug Resistance protein
BAOM_4528	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
BAOM_4529	COG1368	sulfuric ester hydrolase activity
BAOM_4531	COG4607	ABC-type enterochelin transport system periplasmic component
BAOM_4532	COG4604	ABC transporter, ATP-binding protein
BAOM_4533	COG4605	iron ion homeostasis
BAOM_4534	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAOM_4535	COG4844	belongs to the
BAOM_4536	COG1657	PFAM Prenyltransferase squalene oxidase
BAOM_4538	COG1131	(ABC) transporter
BAOM_4543	COG5002	protein histidine kinase activity
BAOM_4543	COG3850	Histidine kinase
BAOM_4544	COG0745	RESPONSE REGULATOR receiver
BAOM_4545	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BAOM_4549	COG2197	response regulator
BAOM_4550	COG4585	Histidine kinase
BAOM_4551	COG3239	Fatty acid desaturase
BAOM_4552	COG4608	Belongs to the ABC transporter superfamily
BAOM_4553	COG0444	Belongs to the ABC transporter superfamily
BAOM_4554	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BAOM_4558	COG1028	Short-chain dehydrogenase reductase Sdr
BAOM_4560	COG0726	polysaccharide deacetylase
BAOM_4561	COG1252	NADH dehydrogenase
BAOM_4567	COG0860	N-Acetylmuramoyl-L-alanine amidase
BAOM_4569	COG4326	sporulation control protein
BAOM_4571	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
BAOM_4572	COG0557	exoribonuclease II activity
BAOM_4573	COG1647	Serine aminopeptidase, S33
BAOM_4574	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BAOM_4577	COG1876	peptidase activity
BAOM_4578	COG0477	Major facilitator Superfamily
BAOM_4580	COG5566	PFAM Mor transcription activator
BAOM_4582	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
BAOM_4583	COG0149	triose-phosphate isomerase activity
BAOM_4584	COG0126	phosphoglycerate kinase activity
BAOM_4588	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
BAOM_4603	COG1475	DNA binding
BAOM_4609	COG1674	ftsk spoiiie
BAOM_4615	COG4974	Belongs to the 'phage' integrase family
BAOM_4618	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BAOM_4620	COG0391	Required for morphogenesis under gluconeogenic growth conditions
BAOM_4621	COG1660	Displays ATPase and GTPase activities
BAOM_4622	COG1051	belongs to the nudix hydrolase family
BAOM_4623	COG0492	ferredoxin-NADP+ reductase activity
BAOM_4624	COG0457	Tetratricopeptide repeat
BAOM_4625	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
BAOM_4625	COG0140	phosphoribosyl-ATP diphosphatase activity
BAOM_4626	COG0107	imidazoleglycerol-phosphate synthase activity
BAOM_4627	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
BAOM_4628	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
BAOM_4629	COG0131	Imidazoleglycerol-phosphate dehydratase
BAOM_4630	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
BAOM_4631	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
BAOM_4632	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
BAOM_4634	COG3764	Sortase (surface protein transpeptidase)
BAOM_4636	COG0110	maltose O-acetyltransferase activity
BAOM_4638	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
BAOM_4639	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
BAOM_4640	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
BAOM_4641	COG3595	metallopeptidase activity
BAOM_4642	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
BAOM_4643	COG0556	nucleotide-excision repair
BAOM_4645	COG4897	Protein conserved in bacteria
BAOM_4646	COG0860	N-Acetylmuramoyl-L-alanine amidase
BAOM_4650	COG2267	carboxylic ester hydrolase activity
BAOM_4651	COG3384	dioxygenase
BAOM_4652	COG0196	riboflavin kinase activity
BAOM_4654	COG1960	acyl-CoA dehydrogenase activity
BAOM_4658	COG1414	Transcriptional regulator
BAOM_4660	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BAOM_4661	COG0793	Belongs to the peptidase S41A family
BAOM_4661	COG3409	Peptidoglycan-binding domain 1 protein
BAOM_4665	COG4942	peptidase
BAOM_4666	COG2177	Part of the ABC transporter FtsEX involved in
BAOM_4667	COG2884	Cell division ATP-binding protein ftsE
BAOM_4668	COG2010	Cytochrome c
BAOM_4669	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BAOM_4670	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
BAOM_4671	COG0653	protein targeting
BAOM_4674	COG1376	ErfK ybiS ycfS ynhG family protein
BAOM_4675	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BAOM_4677	COG1516	flagellar protein fliS
BAOM_4678	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
BAOM_4679	COG1334	flagellar protein FlaG
BAOM_4680	COG1728	Protein conserved in bacteria
BAOM_4682	COG1516	flagellar protein fliS
BAOM_4683	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
BAOM_4686	COG3012	SEC-C Motif Domain Protein
BAOM_4688	COG5492	domain, Protein
BAOM_4688	COG4932	domain protein
BAOM_4691	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
BAOM_4692	COG1699	Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
BAOM_4694	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BAOM_4695	COG4786	Flagellar basal body rod
BAOM_4695	COG1256	bacterial-type flagellum assembly
BAOM_4699	COG1040	competence protein
BAOM_4700	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
BAOM_4703	COG1307	EDD domain protein, DegV family
BAOM_4704	COG2197	response regulator
BAOM_4705	COG4585	Histidine kinase
BAOM_4706	COG1739	Uncharacterized protein family UPF0029
BAOM_4707	COG1316	TRANSCRIPTIONal
BAOM_4709	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BAOM_4711	COG1134	teichoic acid transport
BAOM_4712	COG1682	transport, permease protein
BAOM_4713	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
BAOM_4714	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
BAOM_4715	COG4193	domain, Protein
BAOM_4716	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
BAOM_4717	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
BAOM_4718	COG4193	domain, Protein
BAOM_4720	COG1388	LysM domain
BAOM_4720	COG0791	NLP P60 protein
BAOM_4721	COG2866	Carboxypeptidase
BAOM_4722	COG1316	TRANSCRIPTIONal
BAOM_4723	COG2801	Transposase and inactivated derivatives
BAOM_4727	COG0653	protein targeting
BAOM_4730	COG1785	Belongs to the alkaline phosphatase family
BAOM_4733	COG0671	phosphoesterase, PA-phosphatase related
BAOM_4750	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
BAOM_4751	COG0110	maltose O-acetyltransferase activity
BAOM_4752	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
BAOM_4753	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
BAOM_4754	COG0438	transferase activity, transferring glycosyl groups
BAOM_4760	COG4464	protein tyrosine phosphatase activity
BAOM_4761	COG0489	protein tyrosine kinase activity
BAOM_4762	COG3944	biosynthesis protein
BAOM_4764	COG1305	Transglutaminase-like
BAOM_4766	COG2308	Evidence 4 Homologs of previously reported genes of
BAOM_4767	COG0737	Belongs to the 5'-nucleotidase family
BAOM_4768	COG2217	Heavy metal translocating P-type atpase
BAOM_4769	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BAOM_4770	COG0183	Belongs to the thiolase family
BAOM_4771	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
BAOM_4772	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
BAOM_4773	COG0583	DNA-binding transcription factor activity
BAOM_4794	COG2851	Citrate transporter
BAOM_4795	COG3829	transcription factor binding
BAOM_4795	COG3290	protein histidine kinase activity
BAOM_4796	COG1098	S1 RNA binding domain
BAOM_4799	COG2201	protein-glutamate methylesterase activity
BAOM_4801	COG2318	DinB family
BAOM_4812	COG0697	spore germination
BAOM_4813	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
BAOM_4817	COG2610	gluconate transmembrane transporter activity
BAOM_4826	COG0768	penicillin binding
BAOM_4827	COG4715	Zinc finger, swim domain protein
BAOM_4828	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
BAOM_4833	COG0629	single-stranded DNA binding
BAOM_4839	COG4786	Flagellar basal body rod
BAOM_4840	COG4786	Flagellar basal body rod
BAOM_4841	COG1077	Cell shape determining protein MreB Mrl
BAOM_4842	COG1609	Transcriptional regulator
BAOM_4843	COG0739	heme binding
BAOM_4845	COG2385	sporulation resulting in formation of a cellular spore
BAOM_4848	COG4836	Membrane
BAOM_4849	COG1007	ATP synthesis coupled electron transport
BAOM_4850	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BAOM_4851	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BAOM_4852	COG0713	ATP synthesis coupled electron transport
BAOM_4854	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BAOM_4855	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
BAOM_4857	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BAOM_4858	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BAOM_4859	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BAOM_4860	COG0355	proton-transporting ATP synthase activity, rotational mechanism
BAOM_4861	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
BAOM_4862	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
BAOM_4864	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BAOM_4865	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
BAOM_4866	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BAOM_4867	COG0356	it plays a direct role in the translocation of protons across the membrane
BAOM_4870	COG1404	Belongs to the peptidase S8 family
BAOM_4871	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
BAOM_4872	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
BAOM_4875	COG0698	ribose 5-phosphate isomerase
BAOM_4876	COG0840	transmembrane signaling receptor activity
BAOM_4878	COG1971	Probably functions as a manganese efflux pump
BAOM_4879	COG0009	L-threonylcarbamoyladenylate synthase
BAOM_4881	COG2890	protein-(glutamine-N5) methyltransferase activity
BAOM_4882	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
BAOM_4883	COG1435	thymidine kinase activity
BAOM_4885	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
BAOM_4886	COG1494	fructose-1,6-bisphosphatase
BAOM_4887	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BAOM_4888	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
BAOM_4891	COG2204	response regulator
BAOM_4892	COG4821	SIS domain
BAOM_4894	COG3343	RNA polymerase activity
BAOM_4896	COG1703	isobutyryl-CoA mutase activity
BAOM_4896	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
BAOM_4896	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
BAOM_4898	COG1960	acyl-CoA dehydrogenase activity
BAOM_4899	COG1960	acyl-CoA dehydrogenase activity
BAOM_4900	COG1250	3-hydroxyacyl-CoA dehydrogenase
BAOM_4901	COG0183	Belongs to the thiolase family
BAOM_4902	COG2181	nitrate reductase activity
BAOM_4902	COG0247	lactate metabolic process
BAOM_4903	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BAOM_4906	COG4294	response to UV
BAOM_4907	COG0018	arginyl-trna synthetase
BAOM_4909	COG0010	Belongs to the arginase family
BAOM_4910	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
BAOM_4911	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BAOM_4913	COG1994	Peptidase M50
BAOM_4915	COG3465	dGTPase activity
BAOM_4916	COG1078	dGTPase activity
BAOM_4917	COG4844	belongs to the
BAOM_4921	COG0280	phosphate acetyltransferase
BAOM_4924	COG2363	Small membrane protein
BAOM_4926	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
BAOM_4927	COG0351	phosphomethylpyrimidine kinase
BAOM_4928	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
BAOM_4929	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
BAOM_4930	COG1846	Transcriptional regulator
BAOM_4931	COG2814	Major facilitator Superfamily
BAOM_4933	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BAOM_4934	COG2096	Adenosyltransferase
BAOM_4937	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
BAOM_4939	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
BAOM_4940	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
BAOM_4941	COG1120	ATPase activity
BAOM_4942	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAOM_4943	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BAOM_4944	COG1492	cobalamin metabolic process
BAOM_4948	COG1648	precorrin-2 dehydrogenase activity
BAOM_4960	COG0310	cobalt ion transport
BAOM_4962	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BAOM_4967	COG0840	transmembrane signaling receptor activity
BAOM_4968	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BAOM_4968	COG0551	DNA topoisomerase type I activity
BAOM_4969	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BAOM_4972	COG1309	transcriptional regulator
BAOM_4975	COG0589	response to stress
BAOM_4976	COG0659	secondary active sulfate transmembrane transporter activity
BAOM_4979	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BAOM_4982	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BAOM_4983	COG0488	(ABC) transporter
BAOM_4985	COG2197	response regulator
BAOM_4986	COG4585	Histidine kinase
BAOM_4992	COG2252	PERMEase
BAOM_4995	COG0723	plastoquinol--plastocyanin reductase activity
BAOM_4995	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BAOM_4996	COG4895	conserved protein (DUF2196)
BAOM_4998	COG0788	formyltetrahydrofolate deformylase activity
BAOM_5001	COG5002	protein histidine kinase activity
BAOM_5002	COG0745	RESPONSE REGULATOR receiver
BAOM_5003	COG0577	efflux transmembrane transporter activity
BAOM_5003	COG1136	(ABC) transporter
BAOM_5007	COG3610	response to peptide
BAOM_5037	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
BAOM_5040	COG0583	DNA-binding transcription factor activity
BAOM_5041	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
BAOM_5043	COG1879	ABC-type sugar transport system periplasmic component
BAOM_5044	COG1172	Belongs to the binding-protein-dependent transport system permease family
BAOM_5045	COG1129	ABC transporter
BAOM_5047	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BAOM_5048	COG1609	Transcriptional regulator
BAOM_5050	COG0583	DNA-binding transcription factor activity
BAOM_5052	COG0668	transmembrane transport
BAOM_5053	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BAOM_5054	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BAOM_5055	COG0765	amino acid transport
BAOM_5056	COG1126	abc transporter atp-binding protein
BAOM_5059	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAOM_5060	COG0326	Molecular chaperone. Has ATPase activity
BAOM_5061	COG1846	Transcriptional regulator
BAOM_5062	COG2814	Major facilitator Superfamily
BAOM_5063	COG2252	PERMEase
BAOM_5064	COG2072	flavoprotein involved in K transport
BAOM_5065	COG1733	regulation of RNA biosynthetic process
BAOM_5066	COG2814	Major facilitator Superfamily
BAOM_5067	COG0656	L-ascorbic acid biosynthetic process
BAOM_5068	COG1902	pentaerythritol trinitrate reductase activity
BAOM_5069	COG2824	Alkylphosphonate utilization operon protein PhnA
BAOM_5071	COG0531	amino acid
BAOM_5074	COG5337	Spore coat protein CotH
BAOM_5076	COG3829	transcription factor binding
BAOM_5076	COG3290	protein histidine kinase activity
BAOM_5077	COG1028	Short-chain dehydrogenase reductase Sdr
BAOM_5078	COG2610	gluconate transmembrane transporter activity
BAOM_5083	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAOM_5084	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAOM_5085	COG1120	ATPase activity
BAOM_5087	COG0577	efflux transmembrane transporter activity
BAOM_5088	COG1136	(ABC) transporter
BAOM_5089	COG2329	Antibiotic biosynthesis monooxygenase
BAOM_5090	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
BAOM_5093	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BAOM_5094	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
BAOM_5095	COG4853	Protein conserved in bacteria
BAOM_5097	COG5002	protein histidine kinase activity
BAOM_5098	COG0745	RESPONSE REGULATOR receiver
BAOM_5103	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
BAOM_5104	COG0305	Participates in initiation and elongation during chromosome replication
BAOM_5106	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
BAOM_5109	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
BAOM_5110	COG0629	single-stranded DNA binding
BAOM_5111	COG0360	Binds together with S18 to 16S ribosomal RNA
BAOM_5112	COG0012	GTP binding
BAOM_5113	COG4481	Protein conserved in bacteria
BAOM_5114	COG0668	transmembrane transport
BAOM_5116	COG1811	Na channel or pump
BAOM_5117	COG1475	DNA binding
BAOM_5118	COG1192	Involved in chromosome partitioning
BAOM_5119	COG1475	DNA binding
BAOM_5120	COG0357	Ribosomal RNA small subunit methyltransferase G
BAOM_5121	COG0445	tRNA wobble uridine modification
BAOM_5122	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
BAOM_5124	COG1847	R3H domain protein
BAOM_5125	COG0706	membrane insertase activity
BAOM_5126	COG0594	ribonuclease P activity
BAOM_p016	COG0791	NLP P60 protein
BAOM_p016	COG0741	lytic transglycosylase activity
BAOM_p035	COG2003	Belongs to the UPF0758 family
BAOM_p050	COG0210	DNA helicase
BAOM_p053	COG2189	Belongs to the N(4) N(6)-methyltransferase family
BAOM_p054	COG3421	Type III restriction
BAOM_p058	COG2304	oxidoreductase activity