locus-tag class description TD68_00010 PF08139 Prokaryotic membrane lipoprotein lipid attachment site TD68_00010 PF11611 Domain of unknown function (DUF4352) TD68_00015 PF00245 Alkaline phosphatase TD68_00020 PF11553 Protein of unknown function (DUF3231) TD68_00025 PF00144 Beta-lactamase TD68_00025 PF11954 Domain of unknown function (DUF3471) TD68_00030 PF00571 CBS domain TD68_00030 PF00005 ABC transporter TD68_00035 PF00528 Binding-protein-dependent transport system inner membrane component TD68_00040 PF12708 Pectate lyase superfamily protein TD68_00040 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain TD68_00045 PF13302 Acetyltransferase (GNAT) domain TD68_00060 PF07690 Major Facilitator Superfamily TD68_00065 PF00392 Bacterial regulatory proteins, gntR family TD68_00065 PF07729 FCD domain TD68_00070 PF07690 Major Facilitator Superfamily TD68_00085 PF01978 Sugar-specific transcriptional regulator TrmB TD68_00085 PF11495 Archaeal transcriptional regulator TrmB TD68_00130 PF02769 AIR synthase related protein, C-terminal domain TD68_00130 PF00586 AIR synthase related protein, N-terminal domain TD68_00135 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE TD68_00140 PF00814 Glycoprotease family TD68_00145 PF00583 Acetyltransferase (GNAT) family TD68_00150 PF00814 Glycoprotease family TD68_00155 PF12848 ABC transporter TD68_00155 PF16326 ABC transporter C-terminal domain TD68_00155 PF00005 ABC transporter TD68_00160 PF01967 MoaC family TD68_00165 PF02629 CoA binding domain TD68_00165 PF06971 Putative DNA-binding protein N-terminus TD68_00170 PF02416 mttA/Hcf106 family TD68_00175 PF00902 Sec-independent protein translocase protein (TatC) TD68_00180 PF14146 Domain of unknown function (DUF4305) TD68_00185 PF02517 CPBP intramembrane metalloprotease TD68_00190 PF00166 Chaperonin 10 Kd subunit TD68_00195 PF00118 TCP-1/cpn60 chaperonin family TD68_00200 PF00196 Bacterial regulatory proteins, luxR family TD68_00200 PF00072 Response regulator receiver domain TD68_00210 PF00144 Beta-lactamase TD68_00215 PF00196 Bacterial regulatory proteins, luxR family TD68_00215 PF00072 Response regulator receiver domain TD68_00220 PF00931 NB-ARC domain TD68_00220 PF13176 Tetratricopeptide repeat TD68_00225 PF00107 Zinc-binding dehydrogenase TD68_00225 PF08240 Alcohol dehydrogenase GroES-like domain TD68_00235 PF00294 pfkB family carbohydrate kinase TD68_00240 PF04012 PspA/IM30 family TD68_00245 PF08271 TFIIB zinc-binding TD68_00250 PF04536 TPM domain TD68_00255 PF13421 SPFH domain-Band 7 family TD68_00260 PF11738 Protein of unknown function (DUF3298) TD68_00260 PF13739 Deacetylase PdaC TD68_00265 PF04542 Sigma-70 region 2 TD68_00265 PF08281 Sigma-70, region 4 TD68_00275 PF00881 Nitroreductase family TD68_00280 PF01047 MarR family TD68_00285 PF00083 Sugar (and other) transporter TD68_00290 PF00107 Zinc-binding dehydrogenase TD68_00290 PF08240 Alcohol dehydrogenase GroES-like domain TD68_00295 PF03330 Lytic transglycolase TD68_00300 PF07676 WD40-like Beta Propeller Repeat TD68_00305 PF14169 Cold-inducible protein YdjO TD68_00310 PF12697 Alpha/beta hydrolase family TD68_00315 PF13170 Protein of unknown function (DUF4003) TD68_00320 PF07732 Multicopper oxidase TD68_00320 PF00394 Multicopper oxidase TD68_00320 PF07731 Multicopper oxidase TD68_00325 PF00324 Amino acid permease TD68_00335 PF01545 Cation efflux family TD68_00335 PF16916 Dimerisation domain of Zinc Transporter TD68_00340 PF17863 AAA lid domain TD68_00340 PF07726 ATPase family associated with various cellular activities (AAA) TD68_00345 PF01882 Protein of unknown function DUF58 TD68_00350 PF13559 Domain of unknown function (DUF4129) TD68_00350 PF01841 Transglutaminase-like superfamily TD68_00350 PF11992 Domain of unknown function (DUF3488) TD68_00355 PF00117 Glutamine amidotransferase class-I TD68_00355 PF00958 GMP synthase C terminal domain TD68_00355 PF02540 NAD synthase TD68_00370 PF00860 Permease family TD68_00380 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) TD68_00385 PF14044 NETI protein TD68_00390 PF00731 AIR carboxylase TD68_00395 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain TD68_00395 PF02222 ATP-grasp domain TD68_00400 PF10397 Adenylosuccinate lyase C-terminus TD68_00400 PF00206 Lyase TD68_00405 PF01259 SAICAR synthetase TD68_00410 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase TD68_00420 PF02769 AIR synthase related protein, C-terminal domain TD68_00420 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain TD68_00420 PF00586 AIR synthase related protein, N-terminal domain TD68_00425 PF00156 Phosphoribosyl transferase domain TD68_00430 PF02769 AIR synthase related protein, C-terminal domain TD68_00430 PF00586 AIR synthase related protein, N-terminal domain TD68_00435 PF00551 Formyl transferase TD68_00440 PF02142 MGS-like domain TD68_00440 PF01808 AICARFT/IMPCHase bienzyme TD68_00445 PF02844 Phosphoribosylglycinamide synthetase, N domain TD68_00445 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain TD68_00445 PF02843 Phosphoribosylglycinamide synthetase, C domain TD68_00450 PF01037 Lrp/AsnC ligand binding domain TD68_00455 PF13520 Amino acid permease TD68_00460 PF11127 Protein of unknown function (DUF2892) TD68_00465 PF01979 Amidohydrolase family TD68_00465 PF13382 Adenine deaminase C-terminal domain TD68_00470 PF11258 Protein of unknown function (DUF3048) N-terminal domain TD68_00470 PF17479 Protein of unknown function (DUF3048) C-terminal domain TD68_00475 PF01371 Trp repressor protein TD68_00480 PF01645 Conserved region in glutamate synthase TD68_00485 PF01884 PcrB family TD68_00490 PF00580 UvrD/REP helicase N-terminal domain TD68_00490 PF13361 UvrD-like helicase C-terminal domain TD68_00495 PF12826 Helix-hairpin-helix motif TD68_00495 PF03119 NAD-dependent DNA ligase C4 zinc finger domain TD68_00495 PF00533 BRCA1 C Terminus (BRCT) domain TD68_00495 PF01653 NAD-dependent DNA ligase adenylation domain TD68_00495 PF03120 NAD-dependent DNA ligase OB-fold domain TD68_00500 PF07537 CamS sex pheromone cAM373 precursor TD68_00505 PF01636 Phosphotransferase enzyme family TD68_00510 PF02308 MgtC family TD68_00515 PF00474 Sodium:solute symporter family TD68_00520 PF02686 Glu-tRNAGln amidotransferase C subunit TD68_00525 PF01425 Amidase TD68_00530 PF02934 GatB/GatE catalytic domain TD68_00530 PF02637 GatB domain TD68_00535 PF00440 Bacterial regulatory proteins, tetR family TD68_00540 PF00873 AcrB/AcrD/AcrF family TD68_00545 PF00781 Diacylglycerol kinase catalytic domain TD68_00550 PF01938 TRAM domain TD68_00550 PF05958 tRNA (Uracil-5-)-methyltransferase TD68_00555 PF00072 Response regulator receiver domain TD68_00555 PF00196 Bacterial regulatory proteins, luxR family TD68_00565 PF00550 Phosphopantetheine attachment site TD68_00570 PF07977 FabA-like domain TD68_00575 PF00109 Beta-ketoacyl synthase, N-terminal domain TD68_00575 PF02801 Beta-ketoacyl synthase, C-terminal domain TD68_00590 PF00005 ABC transporter TD68_00600 PF04634 Protein of unknown function, DUF600 TD68_00615 PF18801 response regulator aspartate phosphatase H, N terminal TD68_00645 PF18801 response regulator aspartate phosphatase H, N terminal TD68_00645 PF13176 Tetratricopeptide repeat TD68_00650 PF01709 Transcriptional regulator TD68_00655 PF11007 Spore coat associated protein JA (CotJA) TD68_00660 PF12652 CotJB protein TD68_00665 PF05067 Manganese containing catalase TD68_00670 PF00583 Acetyltransferase (GNAT) family TD68_00680 PF04854 Protein of unknown function, DUF624 TD68_00685 PF06580 Histidine kinase TD68_00685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TD68_00685 PF00672 HAMP domain TD68_00685 PF02743 Cache domain TD68_00690 PF00072 Response regulator receiver domain TD68_00690 PF12833 Helix-turn-helix domain TD68_00695 PF13416 Bacterial extracellular solute-binding protein TD68_00700 PF00528 Binding-protein-dependent transport system inner membrane component TD68_00705 PF00528 Binding-protein-dependent transport system inner membrane component TD68_00710 PF07470 Glycosyl Hydrolase Family 88 TD68_00715 PF12833 Helix-turn-helix domain TD68_00720 PF13472 GDSL-like Lipase/Acylhydrolase family TD68_00725 PF09224 Domain of unknown function (DUF1961) TD68_00730 PF04854 Protein of unknown function, DUF624 TD68_00735 PF18370 Rhamnogalacturonan I lyases beta-sheet domain TD68_00740 PF01839 FG-GAP repeat TD68_00740 PF18370 Rhamnogalacturonan I lyases beta-sheet domain TD68_00745 PF00657 GDSL-like Lipase/Acylhydrolase TD68_00750 PF02449 Beta-galactosidase TD68_00750 PF08533 Beta-galactosidase C-terminal domain TD68_00750 PF08532 Beta-galactosidase trimerisation domain TD68_00760 PF01547 Bacterial extracellular solute-binding protein TD68_00765 PF00528 Binding-protein-dependent transport system inner membrane component TD68_00770 PF00528 Binding-protein-dependent transport system inner membrane component TD68_00775 PF02056 Family 4 glycosyl hydrolase TD68_00775 PF11975 Family 4 glycosyl hydrolase C-terminal domain TD68_00780 PF04239 Protein of unknown function (DUF421) TD68_00785 PF03992 Antibiotic biosynthesis monooxygenase TD68_00790 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TD68_00795 PF01740 STAS domain TD68_00795 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain TD68_00800 PF01687 Riboflavin kinase TD68_00805 PF01027 Inhibitor of apoptosis-promoting Bax1 TD68_00810 PF13037 Domain of unknown function (DUF3898) TD68_00810 PF13039 Protein of unknown function (DUF3900) TD68_00815 PF00667 FAD binding domain TD68_00815 PF00258 Flavodoxin TD68_00815 PF00175 Oxidoreductase NAD-binding domain TD68_00815 PF00067 Cytochrome P450 TD68_00830 PF00005 ABC transporter TD68_00840 PF00884 Sulfatase TD68_00845 PF00483 Nucleotidyl transferase TD68_00850 PF16363 GDP-mannose 4,6 dehydratase TD68_00855 PF03407 Nucleotide-diphospho-sugar transferase TD68_00860 PF00535 Glycosyl transferase family 2 TD68_00865 PF03407 Nucleotide-diphospho-sugar transferase TD68_00870 PF07690 Major Facilitator Superfamily TD68_00875 PF13520 Amino acid permease TD68_00880 PF00171 Aldehyde dehydrogenase family TD68_00885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TD68_00890 PF00535 Glycosyl transferase family 2 TD68_00895 PF00005 ABC transporter TD68_00895 PF16326 ABC transporter C-terminal domain TD68_00895 PF12848 ABC transporter TD68_00900 PF13411 MerR HTH family regulatory protein TD68_00905 PF07690 Major Facilitator Superfamily TD68_00910 PF13302 Acetyltransferase (GNAT) domain TD68_00915 PF00005 ABC transporter TD68_00915 PF12848 ABC transporter TD68_00920 PF00271 Helicase conserved C-terminal domain TD68_00920 PF00270 DEAD/DEAH box helicase TD68_00925 PF18801 response regulator aspartate phosphatase H, N terminal TD68_00930 PF00107 Zinc-binding dehydrogenase TD68_00930 PF16884 N-terminal domain of oxidoreductase TD68_00935 PF00005 ABC transporter TD68_00940 PF01032 FecCD transport family TD68_00945 PF01032 FecCD transport family TD68_00950 PF01497 Periplasmic binding protein TD68_00955 PF11486 Protein of unknown function (DUF3212) TD68_00960 PF11181 Heat induced stress protein YflT TD68_00965 PF00544 Pectate lyase TD68_00975 PF00939 Sodium:sulfate symporter transmembrane region TD68_00995 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain TD68_00995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TD68_01000 PF12431 Transcriptional regulator TD68_01000 PF00072 Response regulator receiver domain TD68_01000 PF08279 HTH domain TD68_01005 PF03401 Tripartite tricarboxylate transporter family receptor TD68_01010 PF03600 Citrate transporter TD68_01015 PF00753 Metallo-beta-lactamase superfamily TD68_01020 PF02898 Nitric oxide synthase, oxygenase domain TD68_01025 PF00708 Acylphosphatase TD68_01030 PF03475 3-alpha domain TD68_01030 PF03473 MOSC domain TD68_01035 PF11588 Protein of unknown function (DUF3243) TD68_01040 PF00557 Metallopeptidase family M24 TD68_01045 PF00367 phosphotransferase system, EIIB TD68_01045 PF02378 Phosphotransferase system, EIIC TD68_01050 PF00884 Sulfatase TD68_01055 PF09350 Domain of unknown function (DUF1992) TD68_01060 PF01235 Sodium:alanine symporter family TD68_01065 PF00367 phosphotransferase system, EIIB TD68_01065 PF02378 Phosphotransferase system, EIIC TD68_01070 PF00128 Alpha amylase, catalytic domain TD68_01070 PF16657 Maltogenic Amylase, C-terminal domain TD68_01075 PF00392 Bacterial regulatory proteins, gntR family TD68_01075 PF07702 UTRA domain TD68_01080 PF00881 Nitroreductase family TD68_01085 PF02872 5'-nucleotidase, C-terminal domain TD68_01085 PF00149 Calcineurin-like phosphoesterase TD68_01090 PF01965 DJ-1/PfpI family TD68_01095 PF00356 Bacterial regulatory proteins, lacI family TD68_01100 PF07690 Major Facilitator Superfamily TD68_01105 PF08501 Shikimate dehydrogenase substrate binding domain TD68_01105 PF18317 Shikimate 5'-dehydrogenase C-terminal domain TD68_01110 PF01487 Type I 3-dehydroquinase TD68_01115 PF07690 Major Facilitator Superfamily TD68_01120 PF06569 Protein of unknown function (DUF1128) TD68_01125 PF01451 Low molecular weight phosphotyrosine protein phosphatase TD68_01135 PF03631 Virulence factor BrkB TD68_01140 PF07690 Major Facilitator Superfamily TD68_01145 PF01699 Sodium/calcium exchanger protein TD68_01150 PF14167 YfkD-like protein TD68_01155 PF00924 Mechanosensitive ion channel TD68_01160 PF04055 Radical SAM superfamily TD68_01160 PF08756 YfkB-like domain TD68_01170 PF01522 Polysaccharide deacetylase TD68_01175 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase TD68_01175 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TD68_01185 PF01544 CorA-like Mg2+ transporter protein TD68_01190 PF00730 HhH-GPD superfamily base excision DNA repair protein TD68_01200 PF05958 tRNA (Uracil-5-)-methyltransferase TD68_01200 PF01938 TRAM domain TD68_01205 PF01207 Dihydrouridine synthase (Dus) TD68_01215 PF00676 Dehydrogenase E1 component TD68_01220 PF02779 Transketolase, pyrimidine binding domain TD68_01220 PF02780 Transketolase, C-terminal domain TD68_01225 PF02817 e3 binding domain TD68_01225 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) TD68_01225 PF00364 Biotin-requiring enzyme TD68_01230 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TD68_01230 PF07992 Pyridine nucleotide-disulphide oxidoreductase TD68_01235 PF02954 Bacterial regulatory protein, Fis family TD68_01235 PF00158 Sigma-54 interaction domain TD68_01235 PF01590 GAF domain TD68_01240 PF08141 Small acid-soluble spore protein H family TD68_01245 PF02694 Uncharacterised BCR, YnfA/UPF0060 family TD68_01250 PF17353 Family of unknown function (DUF5381) TD68_01265 PF06013 Proteins of 100 residues with WXG TD68_01270 PF11975 Family 4 glycosyl hydrolase C-terminal domain TD68_01270 PF02056 Family 4 glycosyl hydrolase TD68_01275 PF01380 SIS domain TD68_01275 PF01418 Helix-turn-helix domain, rpiR family TD68_01280 PF02378 Phosphotransferase system, EIIC TD68_01280 PF00367 phosphotransferase system, EIIB TD68_01285 PF12708 Pectate lyase superfamily protein TD68_01285 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain TD68_01290 PF00664 ABC transporter transmembrane region TD68_01290 PF00005 ABC transporter TD68_01295 PF00664 ABC transporter transmembrane region TD68_01295 PF00005 ABC transporter TD68_01300 PF07681 DoxX TD68_01305 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TD68_01315 PF03551 Transcriptional regulator PadR-like family TD68_01315 PF10400 Virulence activator alpha C-term TD68_01320 PF01757 Acyltransferase family TD68_01325 PF01337 Barstar (barnase inhibitor) TD68_01330 PF08240 Alcohol dehydrogenase GroES-like domain TD68_01330 PF00107 Zinc-binding dehydrogenase TD68_01335 PF12867 DinB superfamily TD68_01340 PF07690 Major Facilitator Superfamily TD68_01345 PF01047 MarR family TD68_01350 PF09924 Uncharacterised conserved protein (DUF2156) TD68_01350 PF03706 Lysylphosphatidylglycerol synthase TM region TD68_01355 PF01497 Periplasmic binding protein TD68_01360 PF01032 FecCD transport family TD68_01365 PF01032 FecCD transport family TD68_01370 PF02567 Phenazine biosynthesis-like protein TD68_01375 PF00881 Nitroreductase family TD68_01380 PF14151 YfhD-like protein TD68_01385 PF08338 Domain of unknown function (DUF1731) TD68_01385 PF01370 NAD dependent epimerase/dehydratase family TD68_01390 PF02631 RecX family TD68_01395 PF08838 Protein of unknown function (DUF1811) TD68_01400 PF07690 Major Facilitator Superfamily TD68_01405 PF08176 Small acid-soluble spore protein K family TD68_01410 PF14043 WVELL protein TD68_01415 PF08239 Bacterial SH3 domain TD68_01420 PF13630 SdpI/YhfL protein family TD68_01425 PF00561 alpha/beta hydrolase fold TD68_01430 PF00535 Glycosyl transferase family 2 TD68_01435 PF09586 Bacterial membrane protein YfhO TD68_01440 PF04307 LexA-binding, inner membrane-associated putative hydrolase TD68_01445 PF14815 NUDIX domain TD68_01445 PF00730 HhH-GPD superfamily base excision DNA repair protein TD68_01460 PF04259 Small, acid-soluble spore protein, gamma-type TD68_01465 PF14182 YgaB-like protein TD68_01470 PF04167 Protein of unknown function (DUF402) TD68_01475 PF00005 ABC transporter TD68_01475 PF00664 ABC transporter transmembrane region TD68_01480 PF06081 Aromatic acid exporter family member 1 TD68_01485 PF00202 Aminotransferase class-III TD68_01490 PF00578 AhpC/TSA family TD68_01495 PF01475 Ferric uptake regulator family TD68_01500 PF11023 Zinc-ribbon containing domain TD68_01505 PF14540 Nucleotidyltransferase-like TD68_01505 PF18576 Helix-turn-helix domain TD68_01605 PF08240 Alcohol dehydrogenase GroES-like domain TD68_01605 PF00107 Zinc-binding dehydrogenase TD68_01605 PF13823 Alcohol dehydrogenase GroES-associated TD68_01610 PF07875 Coat F domain TD68_01620 PF07070 SpoOM protein TD68_01625 PF03575 Peptidase family S51 TD68_01630 PF13667 ThiC-associated domain TD68_01630 PF01964 Radical SAM ThiC family TD68_01635 PF13040 Fur-regulated basic protein B TD68_01645 PF00005 ABC transporter TD68_01650 PF09084 NMT1/THI5 like TD68_01655 PF00528 Binding-protein-dependent transport system inner membrane component TD68_01660 PF00296 Luciferase-like monooxygenase TD68_01665 PF00253 Ribosomal protein S14p/S29e TD68_01675 PF01381 Helix-turn-helix TD68_01690 PF08331 Domain of unknown function (DUF1730) TD68_01695 PF12671 Putative amidase domain TD68_01700 PF00588 SpoU rRNA Methylase family TD68_01705 PF13171 Protein of unknown function (DUF4004) TD68_01710 PF04519 Polymer-forming cytoskeletal TD68_01720 PF06798 PrkA serine protein kinase C-terminal domain TD68_01720 PF08298 PrkA AAA domain TD68_01725 PF04285 Protein of unknown function (DUF444) TD68_01730 PF01047 MarR family TD68_01740 PF07690 Major Facilitator Superfamily TD68_01745 PF03358 NADPH-dependent FMN reductase TD68_01760 PF00392 Bacterial regulatory proteins, gntR family TD68_01765 PF00005 ABC transporter TD68_01770 PF00005 ABC transporter TD68_01775 PF12679 ABC-2 family transporter protein TD68_01780 PF00313 'Cold-shock' DNA-binding domain TD68_01785 PF03180 NLPA lipoprotein TD68_01790 PF07694 5TMR of 5TMR-LYT TD68_01790 PF00990 Diguanylate cyclase, GGDEF domain TD68_01795 PF00375 Sodium:dicarboxylate symporter family TD68_01805 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) TD68_01815 PF08448 PAS fold TD68_01815 PF03705 CheR methyltransferase, all-alpha domain TD68_01815 PF01739 CheR methyltransferase, SAM binding domain TD68_01815 PF01339 CheB methylesterase TD68_01820 PF00149 Calcineurin-like phosphoesterase TD68_01820 PF00565 Staphylococcal nuclease homologue TD68_01820 PF02872 5'-nucleotidase, C-terminal domain TD68_01820 PF00746 LPXTG cell wall anchor motif TD68_01825 PF04203 Sortase domain TD68_01830 PF01479 S4 domain TD68_01830 PF00849 RNA pseudouridylate synthase TD68_01835 PF17326 Family of unknown function (DUF5365) TD68_01840 PF00571 CBS domain TD68_01845 PF13419 Haloacid dehalogenase-like hydrolase TD68_01850 PF00583 Acetyltransferase (GNAT) family TD68_01850 PF00795 Carbon-nitrogen hydrolase TD68_01860 PF00202 Aminotransferase class-III TD68_01865 PF04309 Glycerol-3-phosphate responsive antiterminator TD68_01870 PF00230 Major intrinsic protein TD68_01875 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TD68_01875 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TD68_01880 PF16901 C-terminal domain of alpha-glycerophosphate oxidase TD68_01880 PF01266 FAD dependent oxidoreductase TD68_01885 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TD68_01885 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TD68_01885 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TD68_01885 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TD68_01890 PF13185 GAF domain TD68_01890 PF07730 Histidine kinase TD68_01895 PF00072 Response regulator receiver domain TD68_01895 PF00196 Bacterial regulatory proteins, luxR family TD68_01900 PF03358 NADPH-dependent FMN reductase TD68_01905 PF14148 YhdB-like protein TD68_01910 PF13028 Protein of unknown function (DUF3889) TD68_01915 PF01476 LysM domain TD68_01915 PF00877 NlpC/P60 family TD68_01920 PF02082 Transcriptional regulator TD68_01925 PF05552 Conserved TM helix TD68_01930 PF04293 SpoVR like protein TD68_01935 PF00245 Alkaline phosphatase TD68_01940 PF00877 NlpC/P60 family TD68_01940 PF01476 LysM domain TD68_01945 PF03466 LysR substrate binding domain TD68_01945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TD68_01950 PF00285 Citrate synthase, C-terminal domain TD68_01960 PF13520 Amino acid permease TD68_01965 PF00209 Sodium:neurotransmitter symporter family TD68_01970 PF00392 Bacterial regulatory proteins, gntR family TD68_01970 PF00155 Aminotransferase class I and II TD68_01975 PF00583 Acetyltransferase (GNAT) family TD68_01980 PF00324 Amino acid permease TD68_01985 PF01546 Peptidase family M20/M25/M40 TD68_01990 PF00171 Aldehyde dehydrogenase family TD68_01995 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain TD68_01995 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TD68_02000 PF17453 Sigma-M inhibitor TD68_02005 PF13791 Sigma factor regulator C-terminal TD68_02005 PF13800 Sigma factor regulator N-terminal TD68_02010 PF04542 Sigma-70 region 2 TD68_02010 PF08281 Sigma-70, region 4 TD68_02015 PF00248 Aldo/keto reductase family TD68_02020 PF01553 Acyltransferase TD68_02025 PF01266 FAD dependent oxidoreductase TD68_02030 PF01370 NAD dependent epimerase/dehydratase family TD68_02035 PF03471 Transporter associated domain TD68_02035 PF00571 CBS domain TD68_02035 PF01595 Cyclin M transmembrane N-terminal domain TD68_02040 PF13411 MerR HTH family regulatory protein TD68_02045 PF00571 CBS domain TD68_02045 PF03471 Transporter associated domain TD68_02045 PF01595 Cyclin M transmembrane N-terminal domain TD68_02050 PF02537 CrcB-like protein, Camphor Resistance (CrcB) TD68_02055 PF02537 CrcB-like protein, Camphor Resistance (CrcB) TD68_02060 PF03009 Glycerophosphoryl diester phosphodiesterase family TD68_02065 PF00924 Mechanosensitive ion channel TD68_02070 PF02146 Sir2 family TD68_02075 PF01522 Polysaccharide deacetylase TD68_02080 PF01063 Amino-transferase class IV TD68_02085 PF03553 Na+/H+ antiporter family TD68_02090 PF00582 Universal stress protein family TD68_02095 PF00005 ABC transporter TD68_02095 PF00664 ABC transporter transmembrane region TD68_02100 PF00005 ABC transporter TD68_02100 PF00664 ABC transporter transmembrane region TD68_02105 PF13460 NAD(P)H-binding TD68_02110 PF00269 Small, acid-soluble spore proteins, alpha/beta type TD68_02115 PF17277 Family of unknown function (DUF5342) TD68_02120 PF14398 YheC/D like ATP-grasp TD68_02125 PF14398 YheC/D like ATP-grasp TD68_02135 PF04286 Protein of unknown function (DUF445) TD68_02140 PF06133 Control of competence regulator ComK, YlbF/YmcA TD68_02145 PF08713 DNA alkylation repair enzyme TD68_02155 PF04055 Radical SAM superfamily TD68_02160 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) TD68_02165 PF00999 Sodium/hydrogen exchanger family TD68_02170 PF02080 TrkA-C domain TD68_02180 PF00378 Enoyl-CoA hydratase/isomerase TD68_02185 PF14120 YhzD-like protein TD68_02190 PF13732 Domain of unknown function (DUF4162) TD68_02190 PF00005 ABC transporter TD68_02200 PF00149 Calcineurin-like phosphoesterase TD68_02205 PF13514 AAA domain TD68_02210 PF01966 HD domain TD68_02215 PF14147 Sporulation protein YhaL TD68_02225 PF09680 Family of unknown function TD68_02230 PF09680 Family of unknown function TD68_02240 PF11667 Putative zincin peptidase TD68_02245 PF08963 Protein of unknown function (DUF1878) TD68_02250 PF01047 MarR family TD68_02255 PF12732 YtxH-like protein TD68_02265 PF17099 Tryptophan transporter TrpP TD68_02270 PF00266 Aminotransferase class-V TD68_02275 PF01230 HIT domain TD68_02280 PF00005 ABC transporter TD68_02285 PF05975 Bacterial ABC transporter protein EcsB TD68_02290 PF12787 EcsC protein family TD68_02295 PF01546 Peptidase family M20/M25/M40 TD68_02295 PF07687 Peptidase dimerisation domain TD68_02305 PF03992 Antibiotic biosynthesis monooxygenase TD68_02310 PF00905 Penicillin binding protein transpeptidase domain TD68_02310 PF00912 Transglycosylase TD68_02315 PF01208 Uroporphyrinogen decarboxylase (URO-D) TD68_02330 PF17932 Tetracyclin repressor-like, C-terminal domain TD68_02330 PF00440 Bacterial regulatory proteins, tetR family TD68_02340 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal TD68_02340 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III TD68_02350 PF05343 M42 glutamyl aminopeptidase TD68_02355 PF00375 Sodium:dicarboxylate symporter family TD68_02360 PF12706 Beta-lactamase superfamily domain TD68_02365 PF03099 Biotin/lipoate A/B protein ligase family TD68_02365 PF10437 Bacterial lipoate protein ligase C-terminus TD68_02370 PF13460 NAD(P)H-binding TD68_02375 PF00501 AMP-binding enzyme TD68_02375 PF13193 AMP-binding enzyme C-terminal domain TD68_02385 PF01435 Peptidase family M48 TD68_02385 PF16491 CAAX prenyl protease N-terminal, five membrane helices TD68_02390 PF00082 Subtilase family TD68_02390 PF05922 Peptidase inhibitor I9 TD68_02395 PF00583 Acetyltransferase (GNAT) family TD68_02400 PF08240 Alcohol dehydrogenase GroES-like domain TD68_02400 PF00107 Zinc-binding dehydrogenase TD68_02405 PF01497 Periplasmic binding protein TD68_02410 PF01032 FecCD transport family TD68_02415 PF01032 FecCD transport family TD68_02420 PF00300 Histidine phosphatase superfamily (branch 1) TD68_02425 PF02803 Thiolase, C-terminal domain TD68_02425 PF00108 Thiolase, N-terminal domain TD68_02430 PF02770 Acyl-CoA dehydrogenase, middle domain TD68_02430 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TD68_02430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TD68_02435 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase TD68_02435 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TD68_02440 PF00171 Aldehyde dehydrogenase family TD68_02445 PF00378 Enoyl-CoA hydratase/isomerase TD68_02455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TD68_02460 PF01266 FAD dependent oxidoreductase TD68_02460 PF00355 Rieske [2Fe-2S] domain TD68_02470 PF08858 IDEAL domain TD68_02475 PF06338 ComK protein TD68_02480 PF05901 Excalibur calcium-binding domain TD68_02485 PF00474 Sodium:solute symporter family TD68_02490 PF11755 Protein of unknown function (DUF3311) TD68_02500 PF09335 SNARE associated Golgi protein TD68_02505 PF10502 Signal peptidase, peptidase S26 TD68_02510 PF01494 FAD binding domain TD68_02515 PF01047 MarR family TD68_02520 PF05145 Transition state regulatory protein AbrB TD68_02525 PF03860 Domain of Unknown Function (DUF326) TD68_02530 PF02915 Rubrerythrin TD68_02535 PF12705 PD-(D/E)XK nuclease superfamily TD68_02535 PF13361 UvrD-like helicase C-terminal domain TD68_02540 PF13361 UvrD-like helicase C-terminal domain TD68_02540 PF00580 UvrD/REP helicase N-terminal domain TD68_02540 PF12705 PD-(D/E)XK nuclease superfamily TD68_02545 PF12320 Type 5 capsule protein repressor C-terminal domain TD68_02545 PF00149 Calcineurin-like phosphoesterase TD68_02550 PF13476 AAA domain TD68_02560 PF10676 Spore germination protein gerPA/gerPF TD68_02565 PF10970 Spore germination protein GerPE TD68_02575 PF10737 Spore germination protein GerPC TD68_02580 PF10803 Spore germination GerPB TD68_02585 PF10676 Spore germination protein gerPA/gerPF TD68_02590 PF04235 Protein of unknown function (DUF418) TD68_02595 PF09388 Spo0E like sporulation regulatory protein TD68_02600 PF08757 CotH kinase protein TD68_02605 PF01557 Fumarylacetoacetate (FAA) hydrolase family TD68_02610 PF07457 Protein of unknown function (DUF1516) TD68_02615 PF00082 Subtilase family TD68_02615 PF17936 Bacterial Ig domain TD68_02620 PF10949 Protein of unknown function (DUF2777) TD68_02625 PF00733 Asparagine synthase TD68_02625 PF13537 Glutamine amidotransferase domain TD68_02635 PF01554 MatE TD68_02640 PF02311 AraC-like ligand binding domain TD68_02640 PF12833 Helix-turn-helix domain TD68_02645 PF01040 UbiA prenyltransferase family TD68_02650 PF00356 Bacterial regulatory proteins, lacI family TD68_02655 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TD68_02655 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TD68_02660 PF05163 DinB family TD68_02670 PF00392 Bacterial regulatory proteins, gntR family TD68_02670 PF00155 Aminotransferase class I and II TD68_02675 PF13599 Pentapeptide repeats (9 copies) TD68_02685 PF00561 alpha/beta hydrolase fold TD68_02685 PF08386 TAP-like protein TD68_02695 PF01747 ATP-sulfurylase TD68_02695 PF14306 PUA-like domain TD68_02700 PF01507 Phosphoadenosine phosphosulfate reductase family TD68_02705 PF04029 2-phosphosulpholactate phosphatase TD68_02710 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) TD68_02715 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 TD68_02720 PF13378 Enolase C-terminal domain-like TD68_02720 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain TD68_02725 PF07690 Major Facilitator Superfamily TD68_02735 PF13673 Acetyltransferase (GNAT) domain TD68_02740 PF02219 Methylenetetrahydrofolate reductase TD68_02740 PF02574 Homocysteine S-methyltransferase TD68_02745 PF04461 Protein of unknown function (DUF520) TD68_02750 PF17783 CvfB-like winged helix domain TD68_02750 PF13509 S1 domain TD68_02760 PF12650 Domain of unknown function (DUF3784) TD68_02765 PF02645 Uncharacterised protein, DegV family COG1307 TD68_02770 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) TD68_02770 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 TD68_02775 PF12690 Intracellular proteinase inhibitor TD68_02780 PF12758 Protein of unknown function (DUF3813) TD68_02790 PF00326 Prolyl oligopeptidase family TD68_02795 PF01883 Iron-sulfur cluster assembly protein TD68_02800 PF01565 FAD binding domain TD68_02805 PF07690 Major Facilitator Superfamily TD68_02810 PF02774 Semialdehyde dehydrogenase, dimerisation domain TD68_02810 PF01118 Semialdehyde dehydrogenase, NAD binding domain TD68_02815 PF01960 ArgJ family TD68_02820 PF00696 Amino acid kinase family TD68_02825 PF00202 Aminotransferase class-III TD68_02830 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain TD68_02830 PF00117 Glutamine amidotransferase class-I TD68_02835 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain TD68_02835 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TD68_02840 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TD68_02840 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TD68_02845 PF14168 YjzC-like protein TD68_02850 PF11151 Protein of unknown function (DUF2929) TD68_02865 PF02608 ABC transporter substrate-binding protein PnrA-like TD68_02870 PF10815 ComZ TD68_02880 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal TD68_02880 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III TD68_02885 PF02801 Beta-ketoacyl synthase, C-terminal domain TD68_02885 PF00109 Beta-ketoacyl synthase, N-terminal domain TD68_02890 PF10026 Predicted Zn-dependent protease (DUF2268) TD68_02900 PF00005 ABC transporter TD68_02900 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TD68_02905 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TD68_02910 PF00528 Binding-protein-dependent transport system inner membrane component TD68_02915 PF00528 Binding-protein-dependent transport system inner membrane component TD68_02915 PF12911 N-terminal TM domain of oligopeptide transport permease C TD68_02920 PF12227 Protein of unknown function (DUF3603) TD68_02925 PF00579 tRNA synthetases class I (W and Y) TD68_02930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TD68_02935 PF00528 Binding-protein-dependent transport system inner membrane component TD68_02940 PF12911 N-terminal TM domain of oligopeptide transport permease C TD68_02940 PF00528 Binding-protein-dependent transport system inner membrane component TD68_02945 PF00005 ABC transporter TD68_02945 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TD68_02950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TD68_02950 PF00005 ABC transporter TD68_02955 PF07690 Major Facilitator Superfamily TD68_02965 PF13508 Acetyltransferase (GNAT) domain TD68_02970 PF03960 ArsC family TD68_02975 PF03741 Integral membrane protein TerC family TD68_02980 PF05389 Negative regulator of genetic competence (MecA) TD68_02985 PF06054 Competence protein CoiA-like family TD68_02990 PF01432 Peptidase family M3 TD68_02990 PF08439 Oligopeptidase F TD68_03010 PF01464 Transglycosylase SLT domain TD68_03015 PF01928 CYTH domain TD68_03025 PF04607 Region found in RelA / SpoT proteins TD68_03030 PF01513 ATP-NAD kinase TD68_03035 PF00849 RNA pseudouridylate synthase TD68_03040 PF00149 Calcineurin-like phosphoesterase TD68_03045 PF02254 TrkA-N domain TD68_03045 PF02080 TrkA-C domain TD68_03045 PF00999 Sodium/hydrogen exchanger family TD68_03050 PF03070 TENA/THI-4/PQQC family TD68_03055 PF02581 Thiamine monophosphate synthase TD68_03060 PF01266 FAD dependent oxidoreductase TD68_03065 PF02597 ThiS family TD68_03070 PF05690 Thiazole biosynthesis protein ThiG TD68_03075 PF00899 ThiF family TD68_03080 PF08543 Phosphomethylpyrimidine kinase TD68_03090 PF14153 Spore coat protein CotO TD68_03095 PF10612 Spore coat protein Z TD68_03100 PF10612 Spore coat protein Z TD68_03105 PF07552 Spore Coat Protein X and V domain TD68_03115 PF07552 Spore Coat Protein X and V domain TD68_03120 PF07098 Protein of unknown function (DUF1360) TD68_03130 PF14069 Stage VI sporulation protein F TD68_03135 PF00580 UvrD/REP helicase N-terminal domain TD68_03135 PF13361 UvrD-like helicase C-terminal domain TD68_03160 PF13673 Acetyltransferase (GNAT) domain TD68_03170 PF00756 Putative esterase TD68_03175 PF01053 Cys/Met metabolism PLP-dependent enzyme TD68_03180 PF01053 Cys/Met metabolism PLP-dependent enzyme TD68_03185 PF05684 Protein of unknown function (DUF819) TD68_03200 PF02368 Bacterial Ig-like domain (group 2) TD68_03205 PF12671 Putative amidase domain TD68_03245 PF14040 Deoxyribonuclease NucA/NucB TD68_03250 PF02308 MgtC family TD68_03260 PF09388 Spo0E like sporulation regulatory protein TD68_03270 PF11738 Protein of unknown function (DUF3298) TD68_03270 PF13739 Deacetylase PdaC TD68_03270 PF01522 Polysaccharide deacetylase TD68_03275 PF10901 Protein of unknown function (DUF2690) TD68_03280 PF10990 Protein of unknown function (DUF2809) TD68_03285 PF14172 Domain of unknown function (DUF4309) TD68_03290 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TD68_03290 PF00384 Molybdopterin oxidoreductase TD68_03290 PF12838 4Fe-4S dicluster domain TD68_03290 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TD68_03290 PF01568 Molydopterin dinucleotide binding domain TD68_03295 PF07849 Protein of unknown function (DUF1641) TD68_03300 PF11611 Domain of unknown function (DUF4352) TD68_03305 PF00293 NUDIX domain TD68_03315 PF00067 Cytochrome P450 TD68_03320 PF04101 Glycosyltransferase family 28 C-terminal domain TD68_03340 PF02602 Uroporphyrinogen-III synthase HemD TD68_03345 PF03649 Uncharacterised protein family (UPF0014) TD68_03350 PF00005 ABC transporter TD68_03355 PF13536 Putative multidrug resistance efflux transporter TD68_03365 PF07849 Protein of unknown function (DUF1641) TD68_03370 PF07992 Pyridine nucleotide-disulphide oxidoreductase TD68_03375 PF02614 Glucuronate isomerase TD68_03385 PF00356 Bacterial regulatory proteins, lacI family TD68_03390 PF08125 Mannitol dehydrogenase C-terminal domain TD68_03390 PF01232 Mannitol dehydrogenase Rossmann domain TD68_03395 PF08666 SAF domain TD68_03395 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus TD68_03400 PF01925 Sulfite exporter TauE/SafE TD68_03405 PF05163 DinB family TD68_03410 PF18801 response regulator aspartate phosphatase H, N terminal TD68_03420 PF01476 LysM domain TD68_03420 PF01510 N-acetylmuramoyl-L-alanine amidase TD68_03420 PF01471 Putative peptidoglycan binding domain TD68_03425 PF08000 Bacterial PH domain TD68_03430 PF05908 Poly-gamma-glutamate hydrolase TD68_03435 PF06114 IrrE N-terminal-like domain TD68_03440 PF01381 Helix-turn-helix TD68_03455 PF01695 IstB-like ATP binding protein TD68_03465 PF17356 Phage-like element PBSX protein XtrA TD68_03470 PF08281 Sigma-70, region 4 TD68_03475 PF03592 Terminase small subunit TD68_03475 PF10668 Phage terminase small subunit TD68_03480 PF17288 Terminase RNAseH like domain TD68_03480 PF04466 Phage terminase large subunit TD68_03485 PF04860 Phage portal protein TD68_03490 PF14550 Putative phage serine protease XkdF TD68_03495 PF05065 Phage capsid family TD68_03500 PF11436 Protein of unknown function (DUF3199) TD68_03505 PF12206 Domain of unknown function (DUF3599) TD68_03510 PF04883 Bacteriophage HK97-gp10, putative tail-component TD68_03525 PF04984 Phage tail sheath protein subtilisin-like domain TD68_03525 PF17481 Phage tail sheath protein beta-sandwich domain TD68_03525 PF17482 Phage tail sheath C-terminal domain TD68_03530 PF09393 Phage tail tube protein TD68_03535 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC TD68_03540 PF01464 Transglycosylase SLT domain TD68_03545 PF01476 LysM domain TD68_03555 PF10844 Protein of unknown function (DUF2577) TD68_03560 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TD68_03565 PF10934 Protein of unknown function (DUF2634) TD68_03570 PF04865 Baseplate J-like protein TD68_03575 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) TD68_03590 PF09636 XkdW protein TD68_03595 PF09693 Phage uncharacterised protein (Phage_XkdX) TD68_03605 PF10779 Haemolysin XhlA TD68_03610 PF04688 SPP1 phage holin TD68_03615 PF01476 LysM domain TD68_03615 PF01510 N-acetylmuramoyl-L-alanine amidase TD68_03615 PF01471 Putative peptidoglycan binding domain TD68_03620 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system TD68_03625 PF14171 Toxin SpoIISA, type II toxin-antitoxin system TD68_03630 PF01384 Phosphate transporter family TD68_03635 PF01865 Protein of unknown function DUF47 TD68_03640 PF13520 Amino acid permease TD68_03645 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TD68_03650 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase TD68_03655 PF00535 Glycosyl transferase family 2 TD68_03665 PF13180 PDZ domain TD68_03670 PF03807 NADP oxidoreductase coenzyme F420-dependent TD68_03670 PF14748 Pyrroline-5-carboxylate reductase dimerisation TD68_03675 PF04951 D-aminopeptidase TD68_03680 PF00528 Binding-protein-dependent transport system inner membrane component TD68_03685 PF12911 N-terminal TM domain of oligopeptide transport permease C TD68_03685 PF00528 Binding-protein-dependent transport system inner membrane component TD68_03690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TD68_03690 PF00005 ABC transporter TD68_03695 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TD68_03700 PF17676 LD-carboxypeptidase C-terminal domain TD68_03700 PF02016 LD-carboxypeptidase N-terminal domain TD68_03705 PF13378 Enolase C-terminal domain-like TD68_03705 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain TD68_03710 PF00877 NlpC/P60 family TD68_03715 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TD68_03715 PF00005 ABC transporter TD68_03720 PF10282 Lactonase, 7-bladed beta-propeller TD68_03730 PF03061 Thioesterase superfamily TD68_03735 PF04239 Protein of unknown function (DUF421) TD68_03740 PF03551 Transcriptional regulator PadR-like family TD68_03755 PF12867 DinB superfamily TD68_03760 PF13302 Acetyltransferase (GNAT) domain TD68_03765 PF00893 Small Multidrug Resistance protein TD68_03770 PF00893 Small Multidrug Resistance protein TD68_03775 PF00551 Formyl transferase TD68_03775 PF01842 ACT domain TD68_03780 PF01472 PUA domain TD68_03780 PF00696 Amino acid kinase family TD68_03785 PF00171 Aldehyde dehydrogenase family TD68_03790 PF02566 OsmC-like protein TD68_03795 PF01047 MarR family TD68_03800 PF02566 OsmC-like protein TD68_03815 PF00535 Glycosyl transferase family 2 TD68_03815 PF13181 Tetratricopeptide repeat TD68_03825 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TD68_03830 PF00300 Histidine phosphatase superfamily (branch 1) TD68_03835 PF01717 Cobalamin-independent synthase, Catalytic domain TD68_03835 PF08267 Cobalamin-independent synthase, N-terminal domain TD68_03840 PF00082 Subtilase family TD68_03845 PF01740 STAS domain TD68_03850 PF02361 Cobalt transport protein TD68_03855 PF00005 ABC transporter TD68_03860 PF09819 ABC-type cobalt transport system, permease component TD68_03865 PF07615 YKOF-related Family TD68_03870 PF00072 Response regulator receiver domain TD68_03870 PF00486 Transcriptional regulatory protein, C terminal TD68_03875 PF00512 His Kinase A (phospho-acceptor) domain TD68_03875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TD68_03875 PF00672 HAMP domain TD68_03880 PF03413 Peptidase propeptide and YPEB domain TD68_03885 PF03413 Peptidase propeptide and YPEB domain TD68_03890 PF03448 MgtE intracellular N domain TD68_03890 PF01769 Divalent cation transporter TD68_03890 PF00571 CBS domain TD68_03895 PF13411 MerR HTH family regulatory protein TD68_03905 PF01047 MarR family TD68_03910 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase TD68_03920 PF00149 Calcineurin-like phosphoesterase TD68_03935 PF00535 Glycosyl transferase family 2 TD68_03940 PF01068 ATP dependent DNA ligase domain TD68_03945 PF02735 Ku70/Ku80 beta-barrel domain TD68_03950 PF00990 Diguanylate cyclase, GGDEF domain TD68_03950 PF00563 EAL domain TD68_03950 PF03707 Bacterial signalling protein N terminal repeat TD68_03955 PF00563 EAL domain TD68_03955 PF00990 Diguanylate cyclase, GGDEF domain TD68_03955 PF03707 Bacterial signalling protein N terminal repeat TD68_03960 PF00990 Diguanylate cyclase, GGDEF domain TD68_03960 PF00563 EAL domain TD68_03960 PF03707 Bacterial signalling protein N terminal repeat TD68_03965 PF09335 SNARE associated Golgi protein TD68_03970 PF03741 Integral membrane protein TerC family TD68_03975 PF04542 Sigma-70 region 2 TD68_03980 PF12791 Anti-sigma factor N-terminus TD68_03985 PF00269 Small, acid-soluble spore proteins, alpha/beta type TD68_03990 PF08876 Domain of unknown function (DUF1836) TD68_03995 PF01435 Peptidase family M48 TD68_04000 PF02386 Cation transport protein TD68_04005 PF04239 Protein of unknown function (DUF421) TD68_04010 PF01757 Acyltransferase family TD68_04015 PF13426 PAS domain TD68_04015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TD68_04015 PF00512 His Kinase A (phospho-acceptor) domain TD68_04015 PF00989 PAS fold TD68_04015 PF13188 PAS domain TD68_04020 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain TD68_04020 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain TD68_04025 PF01008 Initiation factor 2 subunit family TD68_04030 PF01636 Phosphotransferase enzyme family TD68_04035 PF00795 Carbon-nitrogen hydrolase TD68_04040 PF00155 Aminotransferase class I and II TD68_04045 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain TD68_04045 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain TD68_04055 PF00596 Class II Aldolase and Adducin N-terminal domain TD68_04060 PF03079 ARD/ARD' family TD68_04065 PF06803 Protein of unknown function (DUF1232) TD68_04070 PF09388 Spo0E like sporulation regulatory protein TD68_04080 PF02743 Cache domain TD68_04080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TD68_04080 PF00512 His Kinase A (phospho-acceptor) domain TD68_04085 PF01047 MarR family TD68_04090 PF00691 OmpA family TD68_04090 PF13677 Membrane MotB of proton-channel complex MotA/MotB TD68_04095 PF01618 MotA/TolQ/ExbB proton channel family TD68_04100 PF10431 C-terminal, D2-small domain, of ClpB protein TD68_04100 PF00004 ATPase family associated with various cellular activities (AAA) TD68_04100 PF07724 AAA domain (Cdc48 subfamily) TD68_04100 PF17871 AAA lid domain TD68_04115 PF06508 Queuosine biosynthesis protein QueC TD68_04120 PF01242 6-pyruvoyl tetrahydropterin synthase TD68_04125 PF04055 Radical SAM superfamily TD68_04130 PF14489 QueF-like protein TD68_04135 PF01740 STAS domain TD68_04135 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain TD68_04140 PF11514 Protein of unknown function (DUF3219) TD68_04145 PF13302 Acetyltransferase (GNAT) domain TD68_04150 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) TD68_04160 PF07486 Cell Wall Hydrolase TD68_04165 PF01943 Polysaccharide biosynthesis protein TD68_04170 PF00578 AhpC/TSA family TD68_04185 PF00557 Metallopeptidase family M24 TD68_04185 PF01321 Creatinase/Prolidase N-terminal domain TD68_04190 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family TD68_04190 PF00356 Bacterial regulatory proteins, lacI family TD68_04195 PF03123 CAT RNA binding domain TD68_04195 PF00874 PRD domain TD68_04200 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 TD68_04200 PF00367 phosphotransferase system, EIIB TD68_04200 PF02378 Phosphotransferase system, EIIC TD68_04205 PF00381 PTS HPr component phosphorylation site TD68_04210 PF02896 PEP-utilising enzyme, TIM barrel domain TD68_04210 PF05524 PEP-utilising enzyme, N-terminal TD68_04210 PF00391 PEP-utilising enzyme, mobile domain TD68_04215 PF11132 Transcriptional regulator protein (SplA) TD68_04225 PF00583 Acetyltransferase (GNAT) family TD68_04230 PF00672 HAMP domain TD68_04230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TD68_04230 PF02743 Cache domain TD68_04235 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase TD68_04235 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TD68_04240 PF00188 Cysteine-rich secretory protein family TD68_04245 PF00905 Penicillin binding protein transpeptidase domain TD68_04245 PF03717 Penicillin-binding Protein dimerisation domain TD68_04250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TD68_04250 PF08447 PAS fold TD68_04250 PF00989 PAS fold TD68_04250 PF00512 His Kinase A (phospho-acceptor) domain TD68_04255 PF00155 Aminotransferase class I and II TD68_04260 PF00072 Response regulator receiver domain TD68_04260 PF01584 CheW-like domain TD68_04265 PF14177 YkyB-like protein TD68_04270 PF07690 Major Facilitator Superfamily TD68_04275 PF01476 LysM domain TD68_04275 PF03734 L,D-transpeptidase catalytic domain TD68_04280 PF10518 TAT (twin-arginine translocation) pathway signal sequence TD68_04280 PF00149 Calcineurin-like phosphoesterase TD68_04290 PF00563 EAL domain TD68_04290 PF10388 EAL-domain associated signalling protein domain TD68_04295 PF05067 Manganese containing catalase TD68_04300 PF08796 Protein of unknown function (DUF1797) TD68_04305 PF04308 Ribonuclease H-like TD68_04310 PF14156 Antirepressor AbbA TD68_04320 PF03466 LysR substrate binding domain TD68_04320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TD68_04325 PF00258 Flavodoxin TD68_04335 PF00258 Flavodoxin TD68_04340 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal TD68_04340 PF14602 Hexapeptide repeat of succinyl-transferase TD68_04340 PF00132 Bacterial transferase hexapeptide (six repeats) TD68_04345 PF01546 Peptidase family M20/M25/M40 TD68_04345 PF07687 Peptidase dimerisation domain TD68_04350 PF03698 Uncharacterised protein family (UPF0180) TD68_04355 PF00924 Mechanosensitive ion channel TD68_04360 PF00578 AhpC/TSA family TD68_04360 PF10417 C-terminal domain of 1-Cys peroxiredoxin TD68_04365 PF00578 AhpC/TSA family TD68_04380 PF12804 MobA-like NTP transferase domain TD68_04385 PF00899 ThiF family TD68_04390 PF00994 Probable molybdopterin binding domain TD68_04390 PF03453 MoeA N-terminal region (domain I and II) TD68_04390 PF03454 MoeA C-terminal region (domain IV) TD68_04395 PF03205 Molybdopterin guanine dinucleotide synthesis protein B TD68_04400 PF02391 MoaE protein TD68_04405 PF02597 ThiS family TD68_04410 PF00005 ABC transporter TD68_04410 PF00664 ABC transporter transmembrane region TD68_04415 PF00005 ABC transporter TD68_04415 PF00664 ABC transporter transmembrane region TD68_04420 PF04893 Yip1 domain TD68_04425 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TD68_04430 PF00005 ABC transporter TD68_04435 PF02687 FtsX-like permease family TD68_04435 PF12704 MacB-like periplasmic core domain TD68_04440 PF00455 DeoR C terminal sensor domain TD68_04440 PF08220 DeoR-like helix-turn-helix domain TD68_04445 PF00294 pfkB family carbohydrate kinase TD68_04450 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TD68_04450 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TD68_04455 PF10502 Signal peptidase, peptidase S26 TD68_04465 PF00005 ABC transporter TD68_04465 PF12848 ABC transporter TD68_04470 PF02558 Ketopantoate reductase PanE/ApbA TD68_04470 PF08546 Ketopantoate reductase PanE/ApbA C terminal TD68_04475 PF02073 Thermophilic metalloprotease (M29) TD68_04485 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin TD68_04485 PF18277 AbrB C-terminal domain TD68_04490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TD68_04490 PF00512 His Kinase A (phospho-acceptor) domain TD68_04490 PF00989 PAS fold TD68_04495 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like TD68_04500 PF02254 TrkA-N domain TD68_04500 PF02080 TrkA-C domain TD68_04505 PF13382 Adenine deaminase C-terminal domain TD68_04505 PF01979 Amidohydrolase family TD68_04510 PF17770 Ribonuclease J C-terminal domain TD68_04510 PF00753 Metallo-beta-lactamase superfamily TD68_04510 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain TD68_04525 PF01327 Polypeptide deformylase TD68_04535 PF10368 Putative cell-wall binding lipoprotein TD68_04540 PF00676 Dehydrogenase E1 component TD68_04545 PF02780 Transketolase, C-terminal domain TD68_04545 PF02779 Transketolase, pyrimidine binding domain TD68_04550 PF00364 Biotin-requiring enzyme TD68_04550 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) TD68_04550 PF02817 e3 binding domain TD68_04555 PF07992 Pyridine nucleotide-disulphide oxidoreductase TD68_04555 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TD68_04570 PF01276 Orn/Lys/Arg decarboxylase, major domain TD68_04570 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain TD68_04575 PF05256 Uncharacterised protein family (UPF0223) TD68_04580 PF06335 Protein of unknown function (DUF1054) TD68_04590 PF00459 Inositol monophosphatase family TD68_04595 PF00583 Acetyltransferase (GNAT) family TD68_04600 PF04072 Leucine carboxyl methyltransferase TD68_04605 PF02868 Thermolysin metallopeptidase, alpha-helical domain TD68_04605 PF03413 Peptidase propeptide and YPEB domain TD68_04605 PF01447 Thermolysin metallopeptidase, catalytic domain TD68_04605 PF07504 Fungalysin/Thermolysin Propeptide Motif TD68_04620 PF04542 Sigma-70 region 2 TD68_04620 PF08281 Sigma-70, region 4 TD68_04625 PF13490 Putative zinc-finger TD68_04635 PF17259 Family of unknown function (DUF5325) TD68_04645 PF14036 YlaH-like protein TD68_04650 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) TD68_04655 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) TD68_04660 PF13638 PIN domain TD68_04660 PF02562 PhoH-like protein TD68_04670 PF04960 Glutaminase TD68_04675 PF07408 Protein of unknown function (DUF1507) TD68_04680 PF01098 Cell cycle protein TD68_04685 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TD68_04685 PF02785 Biotin carboxylase C-terminal domain TD68_04685 PF00682 HMGL-like TD68_04685 PF02436 Conserved carboxylase domain TD68_04685 PF00289 Biotin carboxylase, N-terminal domain TD68_04685 PF00364 Biotin-requiring enzyme TD68_04690 PF02628 Cytochrome oxidase assembly protein TD68_04695 PF01040 UbiA prenyltransferase family TD68_04700 PF00034 Cytochrome c TD68_04700 PF00116 Cytochrome C oxidase subunit II, periplasmic domain TD68_04700 PF02790 Cytochrome C oxidase subunit II, transmembrane domain TD68_04705 PF00115 Cytochrome C and Quinol oxidase polypeptide I TD68_04710 PF00510 Cytochrome c oxidase subunit III TD68_04715 PF03626 Prokaryotic Cytochrome C oxidase subunit IV TD68_04720 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) TD68_04725 PF08868 YugN-like family TD68_04730 PF00571 CBS domain TD68_04735 PF14504 CAP-associated N-terminal TD68_04735 PF00188 Cysteine-rich secretory protein family TD68_04740 PF14071 Putative coat protein TD68_04745 PF14003 YlbE-like protein TD68_04755 PF06133 Control of competence regulator ComK, YlbF/YmcA TD68_04760 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) TD68_04770 PF01467 Cytidylyltransferase-like TD68_04775 PF07670 Nucleoside recognition TD68_04780 PF01734 Patatin-like phospholipase TD68_04785 PF05362 Lon protease (S16) C-terminal proteolytic domain TD68_04785 PF13180 PDZ domain TD68_04790 PF05636 HIGH Nucleotidyl Transferase TD68_04795 PF02620 Large ribosomal RNA subunit accumulation protein YceD TD68_04800 PF01783 Ribosomal L32p protein family TD68_04810 PF00583 Acetyltransferase (GNAT) family TD68_04815 PF08546 Ketopantoate reductase PanE/ApbA C terminal TD68_04815 PF02558 Ketopantoate reductase PanE/ApbA TD68_04820 PF10079 Bacillithiol biosynthesis BshC TD68_04825 PF02381 MraZ protein, putative antitoxin-like TD68_04830 PF01795 MraW methylase family TD68_04845 PF03793 PASTA domain TD68_04845 PF03717 Penicillin-binding Protein dimerisation domain TD68_04845 PF00905 Penicillin binding protein transpeptidase domain TD68_04850 PF01225 Mur ligase family, catalytic domain TD68_04850 PF02875 Mur ligase family, glutamate ligase domain TD68_04850 PF08245 Mur ligase middle domain TD68_04855 PF00953 Glycosyl transferase family 4 TD68_04855 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 TD68_04860 PF08245 Mur ligase middle domain TD68_04860 PF02875 Mur ligase family, glutamate ligase domain TD68_04865 PF01098 Cell cycle protein TD68_04870 PF03033 Glycosyltransferase family 28 N-terminal domain TD68_04870 PF04101 Glycosyltransferase family 28 C-terminal domain TD68_04875 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain TD68_04875 PF01565 FAD binding domain TD68_04880 PF08478 POTRA domain, FtsQ-type TD68_04885 PF05949 Bacterial protein of unknown function (DUF881) TD68_04890 PF05949 Bacterial protein of unknown function (DUF881) TD68_04895 PF06947 Protein of unknown function (DUF1290) TD68_04900 PF02491 SHS2 domain inserted in FTSA TD68_04905 PF00091 Tubulin/FtsZ family, GTPase domain TD68_04905 PF12327 FtsZ family, C-terminal domain TD68_04910 PF05922 Peptidase inhibitor I9 TD68_04910 PF00082 Subtilase family TD68_04915 PF03419 Sporulation factor SpoIIGA TD68_04920 PF04542 Sigma-70 region 2 TD68_04920 PF04545 Sigma-70, region 4 TD68_04925 PF04545 Sigma-70, region 4 TD68_04925 PF04539 Sigma-70 region 3 TD68_04925 PF04542 Sigma-70 region 2 TD68_04930 PF00005 ABC transporter TD68_04935 PF01546 Peptidase family M20/M25/M40 TD68_04935 PF07687 Peptidase dimerisation domain TD68_04940 PF05239 PRC-barrel domain TD68_04950 PF01168 Alanine racemase, N-terminal domain TD68_04955 PF04472 Cell division protein SepF TD68_04960 PF02325 YGGT family TD68_04965 PF17774 Putative RNA-binding domain in YlmH TD68_04965 PF01479 S4 domain TD68_04970 PF05103 DivIVA protein TD68_04975 PF08264 Anticodon-binding domain of tRNA TD68_04975 PF00133 tRNA synthetases class I (I, L, M and V) TD68_04980 PF01258 Prokaryotic dksA/traR C4-type zinc finger TD68_04985 PF01252 Signal peptidase (SPase) II TD68_04990 PF01479 S4 domain TD68_04990 PF00849 RNA pseudouridylate synthase TD68_04995 PF00156 Phosphoribosyl transferase domain TD68_05000 PF00860 Permease family TD68_05005 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TD68_05005 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TD68_05010 PF01979 Amidohydrolase family TD68_05015 PF00117 Glutamine amidotransferase class-I TD68_05015 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain TD68_05020 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TD68_05020 PF02142 MGS-like domain TD68_05020 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain TD68_05025 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B TD68_05025 PF00175 Oxidoreductase NAD-binding domain TD68_05030 PF01180 Dihydroorotate dehydrogenase TD68_05035 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family TD68_05040 PF00156 Phosphoribosyl transferase domain TD68_05045 PF01507 Phosphoadenosine phosphosulfate reductase family TD68_05050 PF01384 Phosphate transporter family TD68_05055 PF01747 ATP-sulfurylase TD68_05055 PF14306 PUA-like domain TD68_05065 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TD68_05070 PF01903 CbiX TD68_05085 PF00690 Cation transporter/ATPase, N-terminus TD68_05085 PF00689 Cation transporting ATPase, C-terminus TD68_05090 PF08340 Domain of unknown function (DUF1732) TD68_05090 PF03755 YicC-like family, N-terminal region TD68_05095 PF04025 Domain of unknown function (DUF370) TD68_05100 PF00625 Guanylate kinase TD68_05105 PF01192 RNA polymerase Rpb6 TD68_05110 PF04127 DNA / pantothenate metabolism flavoprotein TD68_05110 PF02441 Flavoprotein TD68_05115 PF18319 PriA DNA helicase Cys-rich region (CRR) domain TD68_05115 PF00271 Helicase conserved C-terminal domain TD68_05115 PF04851 Type III restriction enzyme, res subunit TD68_05115 PF17764 3′ DNA-binding domain (3′BD) TD68_05115 PF18074 Primosomal protein N C-terminal domain TD68_05120 PF01327 Polypeptide deformylase TD68_05125 PF02911 Formyl transferase, C-terminal domain TD68_05125 PF00551 Formyl transferase TD68_05130 PF01029 NusB family TD68_05130 PF01189 16S rRNA methyltransferase RsmB/F TD68_05135 PF04055 Radical SAM superfamily TD68_05145 PF00069 Protein kinase domain TD68_05145 PF03793 PASTA domain TD68_05150 PF03193 RsgA GTPase TD68_05150 PF16745 RsgA N-terminal domain TD68_05155 PF00834 Ribulose-phosphate 3 epimerase family TD68_05160 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain TD68_05160 PF04263 Thiamin pyrophosphokinase, catalytic domain TD68_05165 PF08183 Stage V sporulation protein family TD68_05170 PF00830 Ribosomal L28 family TD68_05175 PF03780 Asp23 family, cell envelope-related function TD68_05180 PF02734 DAK2 domain TD68_05180 PF13684 Dihydroxyacetone kinase family TD68_05185 PF03315 Serine dehydratase beta chain TD68_05185 PF01842 ACT domain TD68_05190 PF03313 Serine dehydratase alpha chain TD68_05195 PF00271 Helicase conserved C-terminal domain TD68_05195 PF17191 RecG wedge domain TD68_05195 PF00270 DEAD/DEAH box helicase TD68_05200 PF03061 Thioesterase superfamily TD68_05205 PF02504 Fatty acid synthesis protein TD68_05210 PF00698 Acyl transferase domain TD68_05220 PF00550 Phosphopantetheine attachment site TD68_05225 PF14622 Ribonuclease-III-like TD68_05225 PF00035 Double-stranded RNA binding motif TD68_05230 PF06470 SMC proteins Flexible Hinge Domain TD68_05230 PF02463 RecF/RecN/SMC N terminal domain TD68_05235 PF02881 SRP54-type protein, helical bundle domain TD68_05235 PF00448 SRP54-type protein, GTPase domain TD68_05240 PF04297 Putative helix-turn-helix protein, YlxM / p13 like TD68_05245 PF02978 Signal peptide binding domain TD68_05245 PF00448 SRP54-type protein, GTPase domain TD68_05245 PF02881 SRP54-type protein, helical bundle domain TD68_05250 PF00886 Ribosomal protein S16 TD68_05260 PF11068 YlqD protein TD68_05265 PF05239 PRC-barrel domain TD68_05265 PF01782 RimM N-terminal domain TD68_05270 PF01746 tRNA (Guanine-1)-methyltransferase TD68_05275 PF01245 Ribosomal protein L19 TD68_05280 PF01926 50S ribosome-binding GTPase TD68_05285 PF01351 Ribonuclease HII TD68_05295 PF01312 FlhB HrpN YscU SpaS Family TD68_05300 PF08442 ATP-grasp domain TD68_05300 PF00549 CoA-ligase TD68_05305 PF02629 CoA binding domain TD68_05305 PF00549 CoA-ligase TD68_05310 PF02481 DNA recombination-mediator protein A TD68_05315 PF01396 Topoisomerase DNA binding C4 zinc finger TD68_05315 PF01131 DNA topoisomerase TD68_05315 PF01751 Toprim domain TD68_05320 PF01134 Glucose inhibited division protein A TD68_05325 PF00589 Phage integrase family TD68_05325 PF02899 Phage integrase, N-terminal SAM-like domain TD68_05330 PF00227 Proteasome subunit TD68_05335 PF10431 C-terminal, D2-small domain, of ClpB protein TD68_05335 PF00004 ATPase family associated with various cellular activities (AAA) TD68_05335 PF07724 AAA domain (Cdc48 subfamily) TD68_05340 PF08222 CodY helix-turn-helix domain TD68_05340 PF06018 CodY GAF-like domain TD68_05345 PF00460 Flagella basal body rod protein TD68_05350 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TD68_05350 PF00460 Flagella basal body rod protein TD68_05355 PF02049 Flagellar hook-basal body complex protein FliE TD68_05360 PF01514 Secretory protein of YscJ/FliF family TD68_05360 PF08345 Flagellar M-ring protein C-terminal TD68_05365 PF01706 FliG C-terminal domain TD68_05365 PF14841 FliG middle domain TD68_05365 PF14842 FliG N-terminal domain TD68_05370 PF02108 Flagellar assembly protein FliH TD68_05375 PF02874 ATP synthase alpha/beta family, beta-barrel domain TD68_05375 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TD68_05375 PF18269 T3SS EscN ATPase C-terminal domain TD68_05380 PF02050 Flagellar FliJ protein TD68_05385 PF03448 MgtE intracellular N domain TD68_05390 PF02120 Flagellar hook-length control protein FliK TD68_05395 PF03963 Flagellar hook capping protein - N-terminal region TD68_05400 PF00460 Flagella basal body rod protein TD68_05400 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TD68_05405 PF06289 Flagellar and Swarming motility proteins TD68_05410 PF03748 Flagellar basal body-associated protein FliL TD68_05415 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term TD68_05415 PF02154 Flagellar motor switch protein FliM TD68_05420 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term TD68_05420 PF04509 CheC-like family TD68_05425 PF00072 Response regulator receiver domain TD68_05430 PF04347 Flagellar biosynthesis protein, FliO TD68_05435 PF00813 FliP family TD68_05440 PF01313 Bacterial export proteins, family 3 TD68_05445 PF01311 Bacterial export proteins, family 1 TD68_05450 PF01312 FlhB HrpN YscU SpaS Family TD68_05455 PF00771 FHIPEP family TD68_05460 PF00448 SRP54-type protein, GTPase domain TD68_05465 PF10609 NUBPL iron-transfer P-loop NTPase TD68_05470 PF01339 CheB methylesterase TD68_05470 PF00072 Response regulator receiver domain TD68_05475 PF02895 Signal transducing histidine kinase, homodimeric domain TD68_05475 PF01584 CheW-like domain TD68_05475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TD68_05475 PF01627 Hpt domain TD68_05475 PF07194 P2 response regulator binding domain TD68_05480 PF01584 CheW-like domain TD68_05485 PF04509 CheC-like family TD68_05490 PF03975 CheD chemotactic sensory transduction TD68_05495 PF04542 Sigma-70 region 2 TD68_05495 PF04539 Sigma-70 region 3 TD68_05495 PF04545 Sigma-70, region 4 TD68_05505 PF00318 Ribosomal protein S2 TD68_05510 PF00889 Elongation factor TS TD68_05515 PF00696 Amino acid kinase family TD68_05520 PF01765 Ribosome recycling factor TD68_05525 PF01255 Putative undecaprenyl diphosphate synthase TD68_05535 PF13288 DXP reductoisomerase C-terminal domain TD68_05535 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase TD68_05535 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain TD68_05540 PF02163 Peptidase family M50 TD68_05540 PF17820 PDZ domain TD68_05545 PF03129 Anticodon binding domain TD68_05545 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TD68_05545 PF04073 Aminoacyl-tRNA editing domain TD68_05550 PF00929 Exonuclease TD68_05550 PF14579 Helix-hairpin-helix motif TD68_05550 PF02811 PHP domain TD68_05550 PF17657 Bacterial DNA polymerase III alpha subunit finger domain TD68_05550 PF07733 Bacterial DNA polymerase III alpha NTPase domain TD68_05550 PF11490 DNA polymerase III polC-type N-terminus II TD68_05550 PF14480 DNA polymerase III polC-type N-terminus I TD68_05555 PF17384 RimP C-terminal SH3 domain TD68_05555 PF02576 RimP N-terminal domain TD68_05560 PF08529 NusA N-terminal domain TD68_05560 PF00575 S1 RNA binding domain TD68_05560 PF13184 NusA-like KH domain TD68_05565 PF04296 Protein of unknown function (DUF448) TD68_05570 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family TD68_05575 PF04760 Translation initiation factor IF-2, N-terminal region TD68_05575 PF00009 Elongation factor Tu GTP binding domain TD68_05575 PF11987 Translation-initiation factor 2 TD68_05580 PF04456 Protein of unknown function (DUF503) TD68_05585 PF02033 Ribosome-binding factor A TD68_05590 PF01509 TruB family pseudouridylate synthase (N terminal domain) TD68_05590 PF16198 tRNA pseudouridylate synthase B C-terminal domain TD68_05595 PF01687 Riboflavin kinase TD68_05595 PF06574 FAD synthetase TD68_05600 PF00312 Ribosomal protein S15 TD68_05605 PF00013 KH domain TD68_05605 PF03725 3' exoribonuclease family, domain 2 TD68_05605 PF01138 3' exoribonuclease family, domain 1 TD68_05605 PF00575 S1 RNA binding domain TD68_05605 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain TD68_05610 PF01522 Polysaccharide deacetylase TD68_05615 PF00675 Insulinase (Peptidase family M16) TD68_05615 PF05193 Peptidase M16 inactive domain TD68_05620 PF05239 PRC-barrel domain TD68_05625 PF01262 Alanine dehydrogenase/PNT, C-terminal domain TD68_05625 PF16924 Dipicolinate synthase subunit A N-terminal domain TD68_05630 PF02441 Flavoprotein TD68_05635 PF02774 Semialdehyde dehydrogenase, dimerisation domain TD68_05635 PF01118 Semialdehyde dehydrogenase, NAD binding domain TD68_05640 PF00696 Amino acid kinase family TD68_05640 PF13840 ACT domain TD68_05645 PF00701 Dihydrodipicolinate synthetase family TD68_05650 PF17770 Ribonuclease J C-terminal domain TD68_05650 PF00753 Metallo-beta-lactamase superfamily TD68_05650 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain TD68_05655 PF00574 Clp protease TD68_05660 PF14035 YlzJ-like protein TD68_05665 PF09397 Ftsk gamma domain TD68_05665 PF17854 FtsK alpha domain TD68_05665 PF01580 FtsK/SpoIIIE family TD68_05670 PF07702 UTRA domain TD68_05670 PF00392 Bacterial regulatory proteins, gntR family TD68_05675 PF07690 Major Facilitator Superfamily TD68_05680 PF05193 Peptidase M16 inactive domain TD68_05685 PF05193 Peptidase M16 inactive domain TD68_05685 PF00675 Insulinase (Peptidase family M16) TD68_05695 PF11588 Protein of unknown function (DUF3243) TD68_05700 PF11868 Protein of unknown function (DUF3388) TD68_05705 PF13464 Domain of unknown function (DUF4115) TD68_05710 PF01066 CDP-alcohol phosphatidyltransferase TD68_05715 PF18146 Damage-inducible protein CinA KH domain TD68_05715 PF00994 Probable molybdopterin binding domain TD68_05715 PF02464 Competence-damaged protein TD68_05720 PF00154 recA bacterial DNA recombination protein TD68_05725 PF00144 Beta-lactamase TD68_05730 PF01966 HD domain TD68_05730 PF00013 KH domain TD68_05730 PF12072 Domain of unknown function (DUF3552) TD68_05735 PF13277 YmdB-like protein TD68_05740 PF04232 Stage V sporulation protein S (SpoVS) TD68_05745 PF00107 Zinc-binding dehydrogenase TD68_05745 PF08240 Alcohol dehydrogenase GroES-like domain TD68_05750 PF00155 Aminotransferase class I and II TD68_05755 PF00302 Chloramphenicol acetyltransferase TD68_05760 PF00919 Uncharacterized protein family UPF0004 TD68_05760 PF01938 TRAM domain TD68_05760 PF04055 Radical SAM superfamily TD68_05765 PF06133 Control of competence regulator ComK, YlbF/YmcA TD68_05770 PF10628 Outer spore coat protein E (CotE) TD68_05775 PF00488 MutS domain V TD68_05775 PF05190 MutS family domain IV TD68_05775 PF05192 MutS domain III TD68_05775 PF01624 MutS domain I TD68_05775 PF05188 MutS domain II TD68_05780 PF08676 MutL C terminal dimerisation domain TD68_05780 PF01119 DNA mismatch repair protein, C-terminal domain TD68_05795 PF00440 Bacterial regulatory proteins, tetR family TD68_05795 PF13977 BetI-type transcriptional repressor, C-terminal TD68_05800 PF00753 Metallo-beta-lactamase superfamily TD68_05805 PF00698 Acyl transferase domain TD68_05810 PF00698 Acyl transferase domain TD68_05815 PF00698 Acyl transferase domain TD68_05815 PF03060 Nitronate monooxygenase TD68_05820 PF00550 Phosphopantetheine attachment site TD68_05825 PF00109 Beta-ketoacyl synthase, N-terminal domain TD68_05825 PF02801 Beta-ketoacyl synthase, C-terminal domain TD68_05830 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal TD68_05830 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal TD68_05835 PF00378 Enoyl-CoA hydratase/isomerase TD68_05840 PF00378 Enoyl-CoA hydratase/isomerase TD68_05845 PF02801 Beta-ketoacyl synthase, C-terminal domain TD68_05845 PF08659 KR domain TD68_05845 PF00501 AMP-binding enzyme TD68_05845 PF13193 AMP-binding enzyme C-terminal domain TD68_05845 PF00668 Condensation domain TD68_05845 PF00109 Beta-ketoacyl synthase, N-terminal domain TD68_05845 PF00550 Phosphopantetheine attachment site TD68_05845 PF16197 Ketoacyl-synthetase C-terminal extension TD68_05845 PF14765 Polyketide synthase dehydratase TD68_05850 PF00109 Beta-ketoacyl synthase, N-terminal domain TD68_05850 PF02801 Beta-ketoacyl synthase, C-terminal domain TD68_05850 PF08659 KR domain TD68_05850 PF00550 Phosphopantetheine attachment site TD68_05850 PF14765 Polyketide synthase dehydratase TD68_05850 PF16197 Ketoacyl-synthetase C-terminal extension TD68_05855 PF14765 Polyketide synthase dehydratase TD68_05855 PF00550 Phosphopantetheine attachment site TD68_05855 PF02801 Beta-ketoacyl synthase, C-terminal domain TD68_05855 PF00109 Beta-ketoacyl synthase, N-terminal domain TD68_05855 PF16197 Ketoacyl-synthetase C-terminal extension TD68_05855 PF08242 Methyltransferase domain TD68_05855 PF08659 KR domain TD68_05860 PF16197 Ketoacyl-synthetase C-terminal extension TD68_05860 PF00501 AMP-binding enzyme TD68_05860 PF13193 AMP-binding enzyme C-terminal domain TD68_05860 PF14765 Polyketide synthase dehydratase TD68_05860 PF00668 Condensation domain TD68_05860 PF00550 Phosphopantetheine attachment site TD68_05860 PF08659 KR domain TD68_05860 PF02801 Beta-ketoacyl synthase, C-terminal domain TD68_05860 PF00109 Beta-ketoacyl synthase, N-terminal domain TD68_05865 PF08242 Methyltransferase domain TD68_05865 PF00550 Phosphopantetheine attachment site TD68_05865 PF14765 Polyketide synthase dehydratase TD68_05865 PF00109 Beta-ketoacyl synthase, N-terminal domain TD68_05865 PF16197 Ketoacyl-synthetase C-terminal extension TD68_05865 PF02801 Beta-ketoacyl synthase, C-terminal domain TD68_05865 PF00975 Thioesterase domain TD68_05870 PF00067 Cytochrome P450 TD68_05880 PF00082 Subtilase family TD68_05890 PF05908 Poly-gamma-glutamate hydrolase TD68_05895 PF02566 OsmC-like protein TD68_05900 PF00893 Small Multidrug Resistance protein TD68_05905 PF00893 Small Multidrug Resistance protein TD68_05920 PF12788 YmaF family TD68_05930 PF17209 Hfq protein TD68_05935 PF14157 YmzC-like protein TD68_05945 PF07972 NrdI Flavodoxin like TD68_05950 PF08343 Ribonucleotide reductase N-terminal TD68_05950 PF00317 Ribonucleotide reductase, all-alpha domain TD68_05950 PF02867 Ribonucleotide reductase, barrel domain TD68_05955 PF00268 Ribonucleotide reductase, small chain TD68_05965 PF05036 Sporulation related domain TD68_05965 PF01520 N-acetylmuramoyl-L-alanine amidase TD68_05970 PF17866 AAA lid domain TD68_05970 PF00004 ATPase family associated with various cellular activities (AAA) TD68_05975 PF13167 GTP-binding GTPase N-terminal TD68_05975 PF16360 GTP-binding GTPase Middle Region TD68_05975 PF01926 50S ribosome-binding GTPase TD68_05980 PF06838 Methionine gamma-lyase TD68_05985 PF13411 MerR HTH family regulatory protein TD68_05990 PF03951 Glutamine synthetase, beta-Grasp domain TD68_05990 PF00120 Glutamine synthetase, catalytic domain TD68_06005 PF00583 Acetyltransferase (GNAT) family TD68_06010 PF05901 Excalibur calcium-binding domain TD68_06010 PF00565 Staphylococcal nuclease homologue TD68_06015 PF09346 SMI1 / KNR4 family (SUKH-1) TD68_06020 PF04740 LXG domain of WXG superfamily TD68_06020 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH TD68_06035 PF13302 Acetyltransferase (GNAT) domain TD68_06055 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TD68_06075 PF00722 Glycosyl hydrolases family 16 TD68_06110 PF07859 alpha/beta hydrolase fold TD68_06120 PF13419 Haloacid dehalogenase-like hydrolase TD68_06125 PF00248 Aldo/keto reductase family TD68_06145 PF05163 DinB family TD68_06155 PF01476 LysM domain TD68_06160 PF01476 LysM domain TD68_06165 PF00704 Glycosyl hydrolases family 18 TD68_06170 PF04294 VanW like protein TD68_06175 PF05995 Cysteine dioxygenase type I TD68_06185 PF01374 Glycosyl hydrolase family 46 TD68_06205 PF00583 Acetyltransferase (GNAT) family TD68_06210 PF13411 MerR HTH family regulatory protein TD68_06210 PF06445 GyrI-like small molecule binding domain TD68_06215 PF01575 MaoC like domain TD68_06230 PF02586 SOS response associated peptidase (SRAP) TD68_06235 PF00753 Metallo-beta-lactamase superfamily TD68_06245 PF18801 response regulator aspartate phosphatase H, N terminal TD68_06260 PF00005 ABC transporter TD68_06270 PF14037 YoqO-like protein TD68_06275 PF04439 Streptomycin adenylyltransferase TD68_06305 PF05908 Poly-gamma-glutamate hydrolase TD68_06310 PF06912 Protein of unknown function (DUF1275) TD68_06320 PF13761 Domain of unknown function (DUF4166) TD68_06325 PF14158 YndJ-like protein TD68_06330 PF05908 Poly-gamma-glutamate hydrolase TD68_06350 PF10710 Protein of unknown function (DUF2512) TD68_06355 PF07875 Coat F domain TD68_06365 PF00717 Peptidase S24-like TD68_06365 PF01726 LexA DNA binding domain TD68_06370 PF01476 LysM domain TD68_06375 PF00239 Resolvase, N terminal domain TD68_06380 PF05979 Bacterial protein of unknown function (DUF896) TD68_06385 PF00456 Transketolase, thiamine diphosphate binding domain TD68_06385 PF02780 Transketolase, C-terminal domain TD68_06385 PF02779 Transketolase, pyrimidine binding domain TD68_06390 PF10747 Sporulation inhibitor of replication protein SirA TD68_06395 PF03672 Uncharacterised protein family (UPF0154) TD68_06400 PF09388 Spo0E like sporulation regulatory protein TD68_06405 PF02683 Cytochrome C biogenesis protein transmembrane region TD68_06410 PF00072 Response regulator receiver domain TD68_06415 PF07301 Protein of unknown function (DUF1453) TD68_06420 PF11084 Protein of unknown function (DUF2621) TD68_06430 PF08179 Small acid-soluble spore protein P family TD68_06440 PF00330 Aconitase family (aconitate hydratase) TD68_06440 PF00694 Aconitase C-terminal domain TD68_06445 PF00578 AhpC/TSA family TD68_06450 PF08177 Small acid-soluble spore protein N family TD68_06460 PF03061 Thioesterase superfamily TD68_06470 PF01521 Iron-sulphur cluster biosynthesis TD68_06475 PF02660 Glycerol-3-phosphate acyltransferase TD68_06480 PF13380 CoA binding domain TD68_06485 PF00986 DNA gyrase B subunit, carboxyl terminus TD68_06485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TD68_06485 PF01751 Toprim domain TD68_06485 PF00204 DNA gyrase B TD68_06490 PF00521 DNA gyrase/topoisomerase IV, subunit A TD68_06490 PF03989 DNA gyrase C-terminal domain, beta-propeller TD68_06500 PF01235 Sodium:alanine symporter family TD68_06510 PF00486 Transcriptional regulatory protein, C terminal TD68_06510 PF00072 Response regulator receiver domain TD68_06515 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain TD68_06515 PF17189 Glycosyl hydrolase family 30 beta sandwich domain TD68_06520 PF04616 Glycosyl hydrolases family 43 TD68_06520 PF03422 Carbohydrate binding module (family 6) TD68_06525 PF04138 GtrA-like protein TD68_06535 PF09335 SNARE associated Golgi protein TD68_06545 PF01039 Carboxyl transferase domain TD68_06550 PF00378 Enoyl-CoA hydratase/isomerase TD68_06555 PF00682 HMGL-like TD68_06560 PF00364 Biotin-requiring enzyme TD68_06565 PF00289 Biotin carboxylase, N-terminal domain TD68_06565 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TD68_06565 PF02785 Biotin carboxylase C-terminal domain TD68_06570 PF13193 AMP-binding enzyme C-terminal domain TD68_06570 PF00501 AMP-binding enzyme TD68_06575 PF02770 Acyl-CoA dehydrogenase, middle domain TD68_06575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TD68_06575 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TD68_06580 PF02638 Glycosyl hydrolase-like 10 TD68_06585 PF07098 Protein of unknown function (DUF1360) TD68_06590 PF13193 AMP-binding enzyme C-terminal domain TD68_06590 PF00975 Thioesterase domain TD68_06590 PF00550 Phosphopantetheine attachment site TD68_06590 PF00668 Condensation domain TD68_06590 PF00501 AMP-binding enzyme TD68_06595 PF13193 AMP-binding enzyme C-terminal domain TD68_06595 PF00668 Condensation domain TD68_06595 PF00501 AMP-binding enzyme TD68_06595 PF00550 Phosphopantetheine attachment site TD68_06600 PF00668 Condensation domain TD68_06600 PF13193 AMP-binding enzyme C-terminal domain TD68_06600 PF00550 Phosphopantetheine attachment site TD68_06600 PF00501 AMP-binding enzyme TD68_06605 PF00501 AMP-binding enzyme TD68_06605 PF13193 AMP-binding enzyme C-terminal domain TD68_06605 PF00550 Phosphopantetheine attachment site TD68_06605 PF00668 Condensation domain TD68_06610 PF00501 AMP-binding enzyme TD68_06610 PF00668 Condensation domain TD68_06610 PF13193 AMP-binding enzyme C-terminal domain TD68_06610 PF00550 Phosphopantetheine attachment site TD68_06615 PF00970 Oxidoreductase FAD-binding domain TD68_06615 PF00042 Globin TD68_06615 PF00175 Oxidoreductase NAD-binding domain TD68_06620 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family TD68_06625 PF01263 Aldose 1-epimerase TD68_06630 PF16800 IseA DL-endopeptidase inhibitor TD68_06635 PF12833 Helix-turn-helix domain TD68_06635 PF06445 GyrI-like small molecule binding domain TD68_06640 PF18801 response regulator aspartate phosphatase H, N terminal TD68_06640 PF13176 Tetratricopeptide repeat TD68_06650 PF01471 Putative peptidoglycan binding domain TD68_06650 PF01476 LysM domain TD68_06650 PF01510 N-acetylmuramoyl-L-alanine amidase TD68_06660 PF00589 Phage integrase family TD68_06665 PF12728 Helix-turn-helix domain TD68_06675 PF03466 LysR substrate binding domain TD68_06675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TD68_06680 PF08240 Alcohol dehydrogenase GroES-like domain TD68_06680 PF00107 Zinc-binding dehydrogenase TD68_06685 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster TD68_06685 PF07992 Pyridine nucleotide-disulphide oxidoreductase TD68_06690 PF01493 GXGXG motif TD68_06690 PF01645 Conserved region in glutamate synthase TD68_06690 PF00310 Glutamine amidotransferases class-II TD68_06690 PF04898 Glutamate synthase central domain TD68_06695 PF03466 LysR substrate binding domain TD68_06695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TD68_06700 PF00696 Amino acid kinase family TD68_06700 PF01472 PUA domain TD68_06705 PF03807 NADP oxidoreductase coenzyme F420-dependent TD68_06705 PF14748 Pyrroline-5-carboxylate reductase dimerisation TD68_06710 PF02334 Replication terminator protein TD68_06720 PF00975 Thioesterase domain TD68_06720 PF00668 Condensation domain TD68_06720 PF13193 AMP-binding enzyme C-terminal domain TD68_06720 PF00550 Phosphopantetheine attachment site TD68_06720 PF00501 AMP-binding enzyme TD68_06725 PF00550 Phosphopantetheine attachment site TD68_06725 PF00668 Condensation domain TD68_06725 PF00501 AMP-binding enzyme TD68_06725 PF13193 AMP-binding enzyme C-terminal domain TD68_06730 PF00501 AMP-binding enzyme TD68_06730 PF00109 Beta-ketoacyl synthase, N-terminal domain TD68_06730 PF00668 Condensation domain TD68_06730 PF13193 AMP-binding enzyme C-terminal domain TD68_06730 PF00202 Aminotransferase class-III TD68_06730 PF16197 Ketoacyl-synthetase C-terminal extension TD68_06730 PF00550 Phosphopantetheine attachment site TD68_06730 PF02801 Beta-ketoacyl synthase, C-terminal domain TD68_06735 PF00698 Acyl transferase domain TD68_06765 PF17763 Glutaminase/Asparaginase C-terminal domain TD68_06765 PF00710 Asparaginase, N-terminal TD68_06770 PF00291 Pyridoxal-phosphate dependent enzyme TD68_06775 PF01042 Endoribonuclease L-PSP TD68_06810 PF00692 dUTPase TD68_06840 PF01526 Tn3 transposase DDE domain TD68_06840 PF13700 Domain of unknown function (DUF4158) TD68_06845 PF00239 Resolvase, N terminal domain TD68_06845 PF02796 Helix-turn-helix domain of resolvase TD68_06855 PF01965 DJ-1/PfpI family TD68_06865 PF09636 XkdW protein TD68_06930 PF14037 YoqO-like protein TD68_06960 PF09643 YopX protein TD68_06985 PF09467 Hypothetical protein Yopt TD68_06990 PF13443 Cro/C1-type HTH DNA-binding domain TD68_07000 PF14072 DNA-sulfur modification-associated TD68_07005 PF00589 Phage integrase family TD68_07005 PF02899 Phage integrase, N-terminal SAM-like domain TD68_07010 PF01381 Helix-turn-helix TD68_07070 PF17094 Uncharacterised protein family (UPF0715) TD68_07085 PF13443 Cro/C1-type HTH DNA-binding domain TD68_07095 PF17094 Uncharacterised protein family (UPF0715) TD68_07130 PF01381 Helix-turn-helix TD68_07135 PF16302 Domain of unknown function (DUF4944) TD68_07150 PF00216 Bacterial DNA-binding protein TD68_07280 PF03009 Glycerophosphoryl diester phosphodiesterase family TD68_07310 PF10145 Phage-related minor tail protein TD68_07310 PF01464 Transglycosylase SLT domain TD68_07310 PF01551 Peptidase family M23 TD68_07315 PF01551 Peptidase family M23 TD68_07315 PF10145 Phage-related minor tail protein TD68_07315 PF01464 Transglycosylase SLT domain TD68_07325 PF00817 impB/mucB/samB family TD68_07325 PF11799 impB/mucB/samB family C-terminal domain TD68_07325 PF11798 IMS family HHH motif TD68_07360 PF01965 DJ-1/PfpI family TD68_07365 PF00106 short chain dehydrogenase TD68_07370 PF06103 Bacterial protein of unknown function (DUF948) TD68_07375 PF05163 DinB family TD68_07380 PF07690 Major Facilitator Superfamily TD68_07385 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TD68_07385 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TD68_07390 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TD68_07390 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TD68_07395 PF00384 Molybdopterin oxidoreductase TD68_07395 PF01568 Molydopterin dinucleotide binding domain TD68_07395 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TD68_07405 PF00561 alpha/beta hydrolase fold TD68_07410 PF00440 Bacterial regulatory proteins, tetR family TD68_07410 PF08361 MAATS-type transcriptional repressor, C-terminal region TD68_07415 PF01588 Putative tRNA binding domain TD68_07420 PF07883 Cupin domain TD68_07420 PF12833 Helix-turn-helix domain TD68_07425 PF13305 Tetracyclin repressor-like, C-terminal domain TD68_07425 PF00440 Bacterial regulatory proteins, tetR family TD68_07430 PF00753 Metallo-beta-lactamase superfamily TD68_07435 PF06445 GyrI-like small molecule binding domain TD68_07440 PF13280 WYL domain TD68_07440 PF08279 HTH domain TD68_07450 PF01022 Bacterial regulatory protein, arsR family TD68_07460 PF04238 Protein of unknown function (DUF420) TD68_07465 PF18846 Bacterial archaeo-eukaryotic release factor family 5 TD68_07475 PF00487 Fatty acid desaturase TD68_07480 PF07730 Histidine kinase TD68_07485 PF00196 Bacterial regulatory proteins, luxR family TD68_07485 PF00072 Response regulator receiver domain TD68_07495 PF01476 LysM domain TD68_07495 PF06725 3D domain TD68_07500 PF09382 RQC domain TD68_07500 PF00270 DEAD/DEAH box helicase TD68_07500 PF00271 Helicase conserved C-terminal domain TD68_07500 PF16124 RecQ zinc-binding TD68_07500 PF00570 HRDC domain TD68_07505 PF02525 Flavodoxin-like fold TD68_07510 PF01258 Prokaryotic dksA/traR C4-type zinc finger TD68_07515 PF08000 Bacterial PH domain TD68_07525 PF00171 Aldehyde dehydrogenase family TD68_07530 PF13243 Squalene-hopene cyclase C-terminal domain TD68_07530 PF13249 Squalene-hopene cyclase N-terminal domain TD68_07535 PF02777 Iron/manganese superoxide dismutases, C-terminal domain TD68_07535 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain TD68_07540 PF00209 Sodium:neurotransmitter symporter family TD68_07545 PF01758 Sodium Bile acid symporter family TD68_07550 PF02817 e3 binding domain TD68_07550 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) TD68_07550 PF00364 Biotin-requiring enzyme TD68_07555 PF02779 Transketolase, pyrimidine binding domain TD68_07555 PF16870 2-oxoglutarate dehydrogenase C-terminal TD68_07555 PF00676 Dehydrogenase E1 component TD68_07560 PF00092 von Willebrand factor type A domain TD68_07565 PF07728 AAA domain (dynein-related subfamily) TD68_07570 PF13627 Prokaryotic lipoprotein-attachment site TD68_07570 PF00080 Copper/zinc superoxide dismutase (SODC) TD68_07575 PF00877 NlpC/P60 family TD68_07575 PF01476 LysM domain TD68_07580 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase TD68_07585 PF02457 DisA bacterial checkpoint controller nucleotide-binding TD68_07585 PF10372 Bacterial membrane-spanning protein N-terminus TD68_07590 PF01554 MatE TD68_07595 PF01740 STAS domain TD68_07600 PF02585 GlcNAc-PI de-N-acetylase TD68_07605 PF08830 Protein of unknown function (DUF1806) TD68_07615 PF00892 EamA-like transporter family TD68_07635 PF05163 DinB family TD68_07645 PF14552 Tautomerase enzyme TD68_07650 PF01638 HxlR-like helix-turn-helix TD68_07655 PF00881 Nitroreductase family TD68_07660 PF01738 Dienelactone hydrolase family TD68_07665 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TD68_07670 PF11755 Protein of unknown function (DUF3311) TD68_07675 PF00474 Sodium:solute symporter family TD68_07680 PF01471 Putative peptidoglycan binding domain TD68_07680 PF03572 Peptidase family S41 TD68_07680 PF17820 PDZ domain TD68_07685 PF08241 Methyltransferase domain TD68_07695 PF02557 D-alanyl-D-alanine carboxypeptidase TD68_07700 PF01048 Phosphorylase superfamily TD68_07705 PF14191 YodL-like TD68_07710 PF01569 PAP2 superfamily TD68_07725 PF06855 YozE SAM-like fold TD68_07730 PF14122 YokU-like protein, putative antitoxin TD68_07735 PF12544 Lysine-2,3-aminomutase TD68_07740 PF00583 Acetyltransferase (GNAT) family TD68_07745 PF01546 Peptidase family M20/M25/M40 TD68_07745 PF07687 Peptidase dimerisation domain TD68_07750 PF01144 Coenzyme A transferase TD68_07755 PF01144 Coenzyme A transferase TD68_07760 PF00202 Aminotransferase class-III TD68_07770 PF00583 Acetyltransferase (GNAT) family TD68_07775 PF00535 Glycosyl transferase family 2 TD68_07790 PF12996 DUF based on E. rectale Gene description (DUF3880) TD68_07795 PF02333 Phytase TD68_07800 PF00842 Alanine racemase, C-terminal domain TD68_07800 PF01168 Alanine racemase, N-terminal domain TD68_07805 PF16738 Starch-binding module 26 TD68_07805 PF00128 Alpha amylase, catalytic domain TD68_07810 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading TD68_07810 PF18416 N-acetylglucosamine binding protein domain 2 TD68_07815 PF11188 Protein of unknown function (DUF2975) TD68_07820 PF13443 Cro/C1-type HTH DNA-binding domain TD68_07825 PF05675 Protein of unknown function (DUF817) TD68_07830 PF06445 GyrI-like small molecule binding domain TD68_07830 PF12833 Helix-turn-helix domain TD68_07835 PF09680 Family of unknown function TD68_07845 PF01641 SelR domain TD68_07850 PF01625 Peptide methionine sulfoxide reductase TD68_07855 PF01047 MarR family TD68_07860 PF01554 MatE TD68_07865 PF17431 Uncharacterized YmpT-like TD68_07870 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) TD68_07875 PF13472 GDSL-like Lipase/Acylhydrolase family TD68_07880 PF02630 SCO1/SenC TD68_07885 PF10751 Protein of unknown function (DUF2535) TD68_07890 PF00291 Pyridoxal-phosphate dependent enzyme TD68_07890 PF00585 C-terminal regulatory domain of Threonine dehydratase TD68_07895 PF08461 Ribonuclease R winged-helix domain TD68_07895 PF00158 Sigma-54 interaction domain TD68_07900 PF03006 Haemolysin-III related TD68_07910 PF00186 Dihydrofolate reductase TD68_07915 PF00303 Thymidylate synthase TD68_07920 PF04608 Phosphatidylglycerophosphatase A TD68_07925 PF14005 YpjP-like protein TD68_07930 PF04445 Putative SAM-dependent methyltransferase TD68_07935 PF06491 Disulphide isomerase TD68_07940 PF00920 Dehydratase family TD68_07945 PF08712 Scaffold protein Nfu/NifU N terminal TD68_07945 PF13769 Virulence factor TD68_07950 PF01966 HD domain TD68_07955 PF00255 Glutathione peroxidase TD68_07960 PF04204 Homoserine O-succinyltransferase TD68_07965 PF00534 Glycosyl transferases group 1 TD68_07965 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase TD68_07970 PF00313 'Cold-shock' DNA-binding domain TD68_07980 PF10819 Protein of unknown function (DUF2564) TD68_07985 PF10782 Zinc-finger TD68_07990 PF13456 Reverse transcriptase-like TD68_07995 PF02592 Putative vitamin uptake transporter TD68_08000 PF13456 Reverse transcriptase-like TD68_08010 PF01367 5'-3' exonuclease, C-terminal SAM fold TD68_08010 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain TD68_08015 PF10752 Protein of unknown function (DUF2533) TD68_08020 PF00350 Dynamin family TD68_08025 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family TD68_08030 PF00195 Chalcone and stilbene synthases, N-terminal domain TD68_08030 PF02797 Chalcone and stilbene synthases, C-terminal domain TD68_08035 PF00860 Permease family TD68_08040 PF00156 Phosphoribosyl transferase domain TD68_08045 PF02074 Carboxypeptidase Taq (M32) metallopeptidase TD68_08050 PF03812 2-keto-3-deoxygluconate permease TD68_08055 PF01081 KDPG and KHG aldolase TD68_08060 PF00294 pfkB family carbohydrate kinase TD68_08065 PF00356 Bacterial regulatory proteins, lacI family TD68_08070 PF04962 KduI/IolB family TD68_08080 PF13307 Helicase C-terminal domain TD68_08090 PF01170 Putative RNA methylase family UPF0020 TD68_08090 PF02926 THUMP domain TD68_08095 PF05103 DivIVA protein TD68_08100 PF06908 YspA SLOG family TD68_08105 PF13482 RNase_H superfamily TD68_08110 PF00270 DEAD/DEAH box helicase TD68_08110 PF00271 Helicase conserved C-terminal domain TD68_08110 PF09369 Domain of unknown function (DUF1998) TD68_08115 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 TD68_08125 PF14179 YppG-like protein TD68_08130 PF14178 YppF-like protein TD68_08135 PF08807 Bacterial domain of unknown function (DUF1798) TD68_08140 PF17522 Family of unknown function (DUF5446) TD68_08150 PF10720 Protein of unknown function (DUF2515) TD68_08155 PF03838 Recombination protein U TD68_08160 PF00912 Transglycosylase TD68_08160 PF00905 Penicillin binding protein transpeptidase domain TD68_08170 PF00633 Helix-hairpin-helix motif TD68_08170 PF10576 Iron-sulfur binding domain of endonuclease III TD68_08170 PF00730 HhH-GPD superfamily base excision DNA repair protein TD68_08175 PF07261 Replication initiation and membrane attachment TD68_08180 PF01336 OB-fold nucleic acid binding domain TD68_08180 PF00152 tRNA synthetases class II (D, K and N) TD68_08185 PF00155 Aminotransferase class I and II TD68_08190 PF03413 Peptidase propeptide and YPEB domain TD68_08190 PF17881 Domain of unknown function (DUF5590) TD68_08195 PF04851 Type III restriction enzyme, res subunit TD68_08195 PF13307 Helicase C-terminal domain TD68_08195 PF00929 Exonuclease TD68_08200 PF02261 Aspartate decarboxylase TD68_08205 PF02569 Pantoate-beta-alanine ligase TD68_08210 PF02548 Ketopantoate hydroxymethyltransferase TD68_08220 PF02237 Biotin protein ligase C terminal domain TD68_08220 PF03099 Biotin/lipoate A/B protein ligase family TD68_08220 PF08279 HTH domain TD68_08225 PF01743 Poly A polymerase head domain TD68_08225 PF12627 Probable RNA and SrmB- binding site of polymerase A TD68_08225 PF13735 tRNA nucleotidyltransferase domain 2 putative TD68_08230 PF00534 Glycosyl transferases group 1 TD68_08230 PF13439 Glycosyltransferase Family 4 TD68_08235 PF02585 GlcNAc-PI de-N-acetylase TD68_08240 PF02142 MGS-like domain TD68_08245 PF01113 Dihydrodipicolinate reductase, N-terminus TD68_08245 PF05173 Dihydrodipicolinate reductase, C-terminus TD68_08250 PF03819 MazG nucleotide pyrophosphohydrolase domain TD68_08255 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 TD68_08255 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) TD68_08260 PF00190 Cupin TD68_08265 PF09577 Sporulation protein YpjB (SpoYpjB) TD68_08270 PF07187 Protein of unknown function (DUF1405) TD68_08275 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TD68_08275 PF00032 Cytochrome b(C-terminal)/b6/petD TD68_08280 PF00033 Cytochrome b/b6/petB TD68_08285 PF00355 Rieske [2Fe-2S] domain TD68_08290 PF10673 Protein of unknown function (DUF2487) TD68_08295 PF08864 UPF0302 domain TD68_08295 PF08858 IDEAL domain TD68_08305 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TD68_08310 PF02153 Prephenate dehydrogenase TD68_08310 PF01842 ACT domain TD68_08315 PF00155 Aminotransferase class I and II TD68_08320 PF00290 Tryptophan synthase alpha chain TD68_08325 PF00291 Pyridoxal-phosphate dependent enzyme TD68_08330 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase TD68_08335 PF00218 Indole-3-glycerol phosphate synthase TD68_08340 PF02885 Glycosyl transferase family, helical bundle domain TD68_08340 PF00591 Glycosyl transferase family, a/b domain TD68_08345 PF00425 chorismate binding enzyme TD68_08345 PF04715 Anthranilate synthase component I, N terminal region TD68_08350 PF07736 Chorismate mutase type I TD68_08355 PF01761 3-dehydroquinate synthase TD68_08360 PF01264 Chorismate synthase TD68_08365 PF01739 CheR methyltransferase, SAM binding domain TD68_08365 PF03705 CheR methyltransferase, all-alpha domain TD68_08370 PF00334 Nucleoside diphosphate kinase TD68_08375 PF00348 Polyprenyl synthetase TD68_08380 PF01209 ubiE/COQ5 methyltransferase family TD68_08385 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 TD68_08390 PF02081 Tryptophan RNA-binding attenuator protein TD68_08395 PF01227 GTP cyclohydrolase I TD68_08400 PF00216 Bacterial DNA-binding protein TD68_08405 PF09547 Stage IV sporulation protein A (spore_IV_A) TD68_08415 PF10966 Protein of unknown function (DUF2768) TD68_08420 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus TD68_08420 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus TD68_08425 PF01926 50S ribosome-binding GTPase TD68_08425 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal TD68_08435 PF14045 YIEGIA protein TD68_08445 PF01070 FMN-dependent dehydrogenase TD68_08450 PF00575 S1 RNA binding domain TD68_08455 PF02224 Cytidylate kinase TD68_08460 PF07238 PilZ domain TD68_08460 PF12945 Flagellar protein YcgR TD68_08465 PF03413 Peptidase propeptide and YPEB domain TD68_08465 PF14620 YpeB sporulation TD68_08470 PF07486 Cell Wall Hydrolase TD68_08470 PF01471 Putative peptidoglycan binding domain TD68_08475 PF13367 PrsW family intramembrane metalloprotease TD68_08485 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TD68_08485 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain TD68_08490 PF05389 Negative regulator of genetic competence (MecA) TD68_08495 PF00149 Calcineurin-like phosphoesterase TD68_08500 PF10864 Protein of unknown function (DUF2663) TD68_08505 PF01476 LysM domain TD68_08510 PF02517 CPBP intramembrane metalloprotease TD68_08515 PF00270 DEAD/DEAH box helicase TD68_08515 PF00271 Helicase conserved C-terminal domain TD68_08520 PF14493 Helix-turn-helix domain TD68_08530 PF12822 ECF transporter, substrate-specific component TD68_08535 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TD68_08535 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TD68_08535 PF01842 ACT domain TD68_08540 PF01487 Type I 3-dehydroquinase TD68_08550 PF04542 Sigma-70 region 2 TD68_08550 PF08281 Sigma-70, region 4 TD68_08555 PF00989 PAS fold TD68_08555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TD68_08555 PF18698 Histidine kinase sensor domain TD68_08555 PF00672 HAMP domain TD68_08555 PF00512 His Kinase A (phospho-acceptor) domain TD68_08560 PF00072 Response regulator receiver domain TD68_08560 PF00486 Transcriptional regulatory protein, C terminal TD68_08565 PF01578 Cytochrome C assembly protein TD68_08570 PF05140 ResB-like family TD68_08575 PF00578 AhpC/TSA family TD68_08580 PF01479 S4 domain TD68_08580 PF00849 RNA pseudouridylate synthase TD68_08585 PF07670 Nucleoside recognition TD68_08590 PF07670 Nucleoside recognition TD68_08595 PF07943 Penicillin-binding protein 5, C-terminal domain TD68_08595 PF00768 D-alanyl-D-alanine carboxypeptidase TD68_08600 PF13047 Protein of unknown function (DUF3907) TD68_08605 PF04079 Segregation and condensation complex subunit ScpB TD68_08610 PF02616 Segregation and condensation protein ScpA TD68_08615 PF03745 Domain of unknown function (DUF309) TD68_08620 PF00583 Acetyltransferase (GNAT) family TD68_08625 PF00885 6,7-dimethyl-8-ribityllumazine synthase TD68_08630 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase TD68_08630 PF00925 GTP cyclohydrolase II TD68_08635 PF00677 Lumazine binding domain TD68_08640 PF01872 RibD C-terminal domain TD68_08640 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TD68_08655 PF10502 Signal peptidase, peptidase S26 TD68_08660 PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) TD68_08665 PF00313 'Cold-shock' DNA-binding domain TD68_08670 PF07676 WD40-like Beta Propeller Repeat TD68_08675 PF10787 Uncharacterised protein from bacillus cereus group TD68_08680 PF13229 Right handed beta helix region TD68_08690 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD TD68_08700 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD TD68_08735 PF08459 UvrC Helix-hairpin-helix N-terminal TD68_08735 PF02151 UvrB/uvrC motif TD68_08735 PF01541 GIY-YIG catalytic domain TD68_08740 PF06725 3D domain TD68_08790 PF01653 NAD-dependent DNA ligase adenylation domain TD68_08790 PF03120 NAD-dependent DNA ligase OB-fold domain TD68_08790 PF03119 NAD-dependent DNA ligase C4 zinc finger domain TD68_08790 PF12826 Helix-hairpin-helix motif TD68_08790 PF00533 BRCA1 C Terminus (BRCT) domain TD68_08805 PF00476 DNA polymerase family A TD68_08805 PF01367 5'-3' exonuclease, C-terminal SAM fold TD68_08805 PF01612 3'-5' exonuclease TD68_08805 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain TD68_08820 PF01712 Deoxynucleoside kinase TD68_08830 PF00265 Thymidine kinase TD68_08845 PF02075 Crossover junction endodeoxyribonuclease RuvC TD68_08905 PF01510 N-acetylmuramoyl-L-alanine amidase TD68_08905 PF01471 Putative peptidoglycan binding domain TD68_08910 PF05105 Bacteriophage holin family TD68_08995 PF02796 Helix-turn-helix domain of resolvase TD68_08995 PF00239 Resolvase, N terminal domain TD68_09045 PF18801 response regulator aspartate phosphatase H, N terminal TD68_09070 PF06207 Protein of unknown function (DUF1002) TD68_09075 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain TD68_09075 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain TD68_09080 PF03323 Bacillus/Clostridium GerA spore germination protein TD68_09085 PF14097 Stage V sporulation protein AE1 TD68_09090 PF03862 SpoVAC/SpoVAEB sporulation membrane protein TD68_09095 PF07451 Stage V sporulation protein AD (SpoVAD) TD68_09100 PF03862 SpoVAC/SpoVAEB sporulation membrane protein TD68_09105 PF13782 Stage V sporulation protein AB TD68_09110 PF12164 Stage V sporulation protein AA TD68_09115 PF04545 Sigma-70, region 4 TD68_09115 PF04542 Sigma-70 region 2 TD68_09115 PF04539 Sigma-70 region 3 TD68_09120 PF13581 Histidine kinase-like ATPase domain TD68_09125 PF01740 STAS domain TD68_09130 PF00768 D-alanyl-D-alanine carboxypeptidase TD68_09130 PF07943 Penicillin-binding protein 5, C-terminal domain TD68_09135 PF01048 Phosphorylase superfamily TD68_09140 PF01676 Metalloenzyme superfamily TD68_09145 PF00589 Phage integrase family TD68_09145 PF02899 Phage integrase, N-terminal SAM-like domain TD68_09150 PF14004 Protein of unknown function (DUF4227) TD68_09155 PF01475 Ferric uptake regulator family TD68_09160 PF01944 Stage II sporulation protein M TD68_09170 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TD68_09170 PF03949 Malic enzyme, NAD binding domain TD68_09170 PF00390 Malic enzyme, N-terminal domain TD68_09175 PF03553 Na+/H+ antiporter family TD68_09180 PF10415 Fumarase C C-terminus TD68_09180 PF00206 Lyase TD68_09185 PF17763 Glutaminase/Asparaginase C-terminal domain TD68_09185 PF00710 Asparaginase, N-terminal TD68_09190 PF01381 Helix-turn-helix TD68_09200 PF00293 NUDIX domain TD68_09205 PF13072 Mother cell inhibitor of FtsZ TD68_09210 PF00248 Aldo/keto reductase family TD68_09215 PF13025 Protein of unknown function (DUF3886) TD68_09220 PF12146 Serine aminopeptidase, S33 TD68_09225 PF10827 Protein of unknown function (DUF2552) TD68_09230 PF01521 Iron-sulphur cluster biosynthesis TD68_09235 PF13673 Acetyltransferase (GNAT) domain TD68_09235 PF04229 GrpB protein TD68_09245 PF00583 Acetyltransferase (GNAT) family TD68_09250 PF08863 YolD-like protein TD68_09255 PF00817 impB/mucB/samB family TD68_09255 PF11799 impB/mucB/samB family C-terminal domain TD68_09260 PF14164 YqzH-like protein TD68_09265 PF01594 AI-2E family transporter TD68_09270 PF07690 Major Facilitator Superfamily TD68_09280 PF00485 Phosphoribulokinase / Uridine kinase family TD68_09285 PF00291 Pyridoxal-phosphate dependent enzyme TD68_09290 PF00106 short chain dehydrogenase TD68_09295 PF00753 Metallo-beta-lactamase superfamily TD68_09300 PF03807 NADP oxidoreductase coenzyme F420-dependent TD68_09300 PF14748 Pyrroline-5-carboxylate reductase dimerisation TD68_09305 PF01546 Peptidase family M20/M25/M40 TD68_09310 PF00724 NADH:flavin oxidoreductase / NADH oxidase family TD68_09315 PF12146 Serine aminopeptidase, S33 TD68_09320 PF00471 Ribosomal protein L33 TD68_09325 PF12706 Beta-lactamase superfamily domain TD68_09330 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain TD68_09330 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain TD68_09335 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain TD68_09335 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TD68_09340 PF11798 IMS family HHH motif TD68_09340 PF11799 impB/mucB/samB family C-terminal domain TD68_09340 PF00817 impB/mucB/samB family TD68_09350 PF02096 60Kd inner membrane protein TD68_09355 PF09844 Uncharacterized conserved protein (COG2071) TD68_09360 PF01546 Peptidase family M20/M25/M40 TD68_09360 PF07687 Peptidase dimerisation domain TD68_09365 PF01039 Carboxyl transferase domain TD68_09375 PF03734 L,D-transpeptidase catalytic domain TD68_09380 PF11728 Putative aromatic acid exporter C-terminal domain TD68_09380 PF06081 Aromatic acid exporter family member 1 TD68_09385 PF00005 ABC transporter TD68_09390 PF00528 Binding-protein-dependent transport system inner membrane component TD68_09395 PF00497 Bacterial extracellular solute-binding proteins, family 3 TD68_09400 PF06491 Disulphide isomerase TD68_09405 PF00781 Diacylglycerol kinase catalytic domain TD68_09415 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) TD68_09415 PF00364 Biotin-requiring enzyme TD68_09415 PF02817 e3 binding domain TD68_09420 PF02780 Transketolase, C-terminal domain TD68_09420 PF02779 Transketolase, pyrimidine binding domain TD68_09425 PF00676 Dehydrogenase E1 component TD68_09430 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TD68_09430 PF07992 Pyridine nucleotide-disulphide oxidoreductase TD68_09435 PF00871 Acetokinase family TD68_09440 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TD68_09440 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain TD68_09445 PF01515 Phosphate acetyl/butaryl transferase TD68_09450 PF02954 Bacterial regulatory protein, Fis family TD68_09450 PF00158 Sigma-54 interaction domain TD68_09450 PF00989 PAS fold TD68_09455 PF11118 Protein of unknown function (DUF2627) TD68_09465 PF03972 MmgE/PrpD family TD68_09475 PF02770 Acyl-CoA dehydrogenase, middle domain TD68_09475 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TD68_09475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TD68_09480 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TD68_09480 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain TD68_09485 PF00108 Thiolase, N-terminal domain TD68_09485 PF02803 Thiolase, C-terminal domain TD68_09490 PF03009 Glycerophosphoryl diester phosphodiesterase family TD68_09495 PF01520 N-acetylmuramoyl-L-alanine amidase TD68_09505 PF00724 NADH:flavin oxidoreductase / NADH oxidase family TD68_09515 PF00072 Response regulator receiver domain TD68_09515 PF08769 Sporulation initiation factor Spo0A C terminal TD68_09520 PF05580 SpoIVB peptidase S55 TD68_09520 PF17820 PDZ domain TD68_09525 PF13476 AAA domain TD68_09530 PF01316 Arginine repressor, DNA binding domain TD68_09530 PF02863 Arginine repressor, C-terminal domain TD68_09535 PF01479 S4 domain TD68_09535 PF01728 FtsJ-like methyltransferase TD68_09540 PF02779 Transketolase, pyrimidine binding domain TD68_09540 PF02780 Transketolase, C-terminal domain TD68_09540 PF13292 1-deoxy-D-xylulose-5-phosphate synthase TD68_09545 PF00348 Polyprenyl synthetase TD68_09550 PF02609 Exonuclease VII small subunit TD68_09555 PF13742 OB-fold nucleic acid binding domain TD68_09555 PF02601 Exonuclease VII, large subunit TD68_09560 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain TD68_09560 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain TD68_09565 PF01029 NusB family TD68_09570 PF03780 Asp23 family, cell envelope-related function TD68_09575 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TD68_09575 PF00289 Biotin carboxylase, N-terminal domain TD68_09575 PF02785 Biotin carboxylase C-terminal domain TD68_09580 PF00364 Biotin-requiring enzyme TD68_09585 PF12685 SpoIIIAH-like protein TD68_09595 PF09581 Stage III sporulation protein AF (Spore_III_AF) TD68_09600 PF09546 Stage III sporulation protein AE (spore_III_AE) TD68_09605 PF06686 Stage III sporulation protein AC/AD protein family TD68_09610 PF06686 Stage III sporulation protein AC/AD protein family TD68_09615 PF09548 Stage III sporulation protein AB (spore_III_AB) TD68_09625 PF10942 Protein of unknown function (DUF2619) TD68_09630 PF01132 Elongation factor P (EF-P) OB domain TD68_09630 PF08207 Elongation factor P (EF-P) KOW-like domain TD68_09630 PF09285 Elongation factor P, C-terminal TD68_09635 PF01321 Creatinase/Prolidase N-terminal domain TD68_09635 PF00557 Metallopeptidase family M24 TD68_09640 PF01220 Dehydroquinase class II TD68_09645 PF11085 Conserved membrane protein YqhR TD68_09650 PF07136 Protein of unknown function (DUF1385) TD68_09660 PF01734 Patatin-like phospholipase TD68_09665 PF02742 Iron dependent repressor, metal binding and dimerisation domain TD68_09665 PF01325 Iron dependent repressor, N-terminal DNA binding domain TD68_09670 PF03099 Biotin/lipoate A/B protein ligase family TD68_09675 PF00581 Rhodanese-like domain TD68_09680 PF02347 Glycine cleavage system P-protein TD68_09685 PF02347 Glycine cleavage system P-protein TD68_09690 PF08669 Glycine cleavage T-protein C-terminal barrel domain TD68_09690 PF01571 Aminomethyltransferase folate-binding domain TD68_09695 PF00176 SNF2 family N-terminal domain TD68_09695 PF00271 Helicase conserved C-terminal domain TD68_09700 PF11079 Bacterial protein YqhG of unknown function TD68_09705 PF08671 Anti-repressor SinI TD68_09710 PF01381 Helix-turn-helix TD68_09710 PF08671 Anti-repressor SinI TD68_09715 PF12389 Camelysin metallo-endopeptidase TD68_09730 PF13028 Protein of unknown function (DUF3889) TD68_09735 PF14038 YqzE-like protein TD68_09740 PF14173 ComG operon protein 7 TD68_09745 PF15980 Putative Competence protein ComGF TD68_09755 PF07963 Prokaryotic N-terminal methylation motif TD68_09760 PF07963 Prokaryotic N-terminal methylation motif TD68_09765 PF00482 Type II secretion system (T2SS), protein F TD68_09770 PF00437 Type II/IV secretion system protein TD68_09775 PF01544 CorA-like Mg2+ transporter protein TD68_09780 PF00571 CBS domain TD68_09780 PF03471 Transporter associated domain TD68_09780 PF01595 Cyclin M transmembrane N-terminal domain TD68_09785 PF01740 STAS domain TD68_09785 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain TD68_09795 PF03960 ArsC family TD68_09800 PF11117 Protein of unknown function (DUF2626) TD68_09805 PF00753 Metallo-beta-lactamase superfamily TD68_09810 PF10958 Protein of unknown function (DUF2759) TD68_09815 PF01910 Thiamine-binding protein TD68_09825 PF00246 Zinc carboxypeptidase TD68_09830 PF00884 Sulfatase TD68_09835 PF00480 ROK family TD68_09840 PF06014 Bacterial protein of unknown function (DUF910) TD68_09845 PF01694 Rhomboid family TD68_09850 PF01812 5-formyltetrahydrofolate cyclo-ligase family TD68_09855 PF13439 Glycosyltransferase Family 4 TD68_09855 PF00534 Glycosyl transferases group 1 TD68_09875 PF00005 ABC transporter TD68_09880 PF00005 ABC transporter TD68_09885 PF00528 Binding-protein-dependent transport system inner membrane component TD68_09890 PF00528 Binding-protein-dependent transport system inner membrane component TD68_09895 PF12849 PBP superfamily domain TD68_09905 PF07690 Major Facilitator Superfamily TD68_09910 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain TD68_09910 PF02777 Iron/manganese superoxide dismutases, C-terminal domain TD68_09915 PF04306 Protein of unknown function (DUF456) TD68_09920 PF06691 Protein of unknown function (DUF1189) TD68_09930 PF04551 GcpE protein TD68_09945 PF01475 Ferric uptake regulator family TD68_09950 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) TD68_09950 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 TD68_09955 PF11116 Protein of unknown function (DUF2624) TD68_09960 PF01261 Xylose isomerase-like TIM barrel TD68_09965 PF00270 DEAD/DEAH box helicase TD68_09965 PF00271 Helicase conserved C-terminal domain TD68_09975 PF02401 LytB protein TD68_09980 PF01784 NIF3 (NGG1p interacting factor 3) TD68_09985 PF04816 tRNA (adenine(22)-N(1))-methyltransferase TD68_09990 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TD68_09995 PF00140 Sigma-70 factor, region 1.2 TD68_09995 PF03979 Sigma-70 factor, region 1.1 TD68_09995 PF04542 Sigma-70 region 2 TD68_09995 PF04539 Sigma-70 region 3 TD68_09995 PF04545 Sigma-70, region 4 TD68_10000 PF01807 CHC2 zinc finger TD68_10000 PF08275 DNA primase catalytic core, N-terminal domain TD68_10000 PF10410 DnaB-helicase binding domain of primase TD68_10005 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 TD68_10010 PF03618 Kinase/pyrophosphorylase TD68_10015 PF08279 HTH domain TD68_10015 PF00571 CBS domain TD68_10020 PF02092 Glycyl-tRNA synthetase beta subunit TD68_10025 PF02091 Glycyl-tRNA synthetase alpha subunit TD68_10030 PF11967 Recombination protein O N terminal TD68_10030 PF02565 Recombination protein O C terminal TD68_10035 PF07650 KH domain TD68_10035 PF01926 50S ribosome-binding GTPase TD68_10040 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TD68_10045 PF01219 Prokaryotic diacylglycerol kinase TD68_10050 PF02130 Uncharacterized protein family UPF0054 TD68_10055 PF07698 7TM receptor with intracellular HD hydrolase TD68_10055 PF01966 HD domain TD68_10055 PF07697 7TM-HD extracellular TD68_10060 PF02562 PhoH-like protein TD68_10065 PF06898 Putative stage IV sporulation protein YqfD TD68_10070 PF07873 YabP family TD68_10080 PF12127 SigmaW regulon antibacterial TD68_10085 PF01972 Serine dehydrogenase proteinase TD68_10085 PF01957 NfeD-like C-terminal, partner-binding TD68_10090 PF09424 Yqey-like protein TD68_10095 PF01165 Ribosomal protein S21 TD68_10100 PF02690 Na+/Pi-cotransporter TD68_10105 PF04055 Radical SAM superfamily TD68_10105 PF01938 TRAM domain TD68_10105 PF00919 Uncharacterized protein family UPF0004 TD68_10110 PF04452 RNA methyltransferase TD68_10120 PF00684 DnaJ central domain TD68_10120 PF01556 DnaJ C terminal domain TD68_10120 PF00226 DnaJ domain TD68_10125 PF00012 Hsp70 protein TD68_10130 PF01025 GrpE TD68_10135 PF01628 HrcA protein C terminal domain TD68_10140 PF06969 HemN C-terminal domain TD68_10140 PF04055 Radical SAM superfamily TD68_10145 PF06421 GTP-binding protein LepA C-terminus TD68_10145 PF00679 Elongation factor G C-terminus TD68_10145 PF00009 Elongation factor Tu GTP binding domain TD68_10145 PF03144 Elongation factor Tu domain 2 TD68_10150 PF12438 Protein of unknown function (DUF3679) TD68_10155 PF07454 Stage II sporulation protein P (SpoIIP) TD68_10160 PF03418 Germination protease TD68_10165 PF01649 Ribosomal protein S20 TD68_10170 PF06144 DNA polymerase III, delta subunit TD68_10175 PF14141 YqzM-like protein TD68_10180 PF00753 Metallo-beta-lactamase superfamily TD68_10180 PF13567 Domain of unknown function (DUF4131) TD68_10180 PF03772 Competence protein TD68_10185 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TD68_10190 PF10531 SLBB domain TD68_10195 PF03807 NADP oxidoreductase coenzyme F420-dependent TD68_10195 PF14748 Pyrroline-5-carboxylate reductase dimerisation TD68_10200 PF13649 Methyltransferase domain TD68_10210 PF01966 HD domain TD68_10215 PF01467 Cytidylyltransferase-like TD68_10220 PF01985 CRS1 / YhbY (CRM) domain TD68_10225 PF01488 Shikimate / quinate 5-dehydrogenase TD68_10225 PF08501 Shikimate dehydrogenase substrate binding domain TD68_10225 PF18317 Shikimate 5'-dehydrogenase C-terminal domain TD68_10230 PF01926 50S ribosome-binding GTPase TD68_10240 PF08970 Sporulation inhibitor A TD68_10245 PF00657 GDSL-like Lipase/Acylhydrolase TD68_10250 PF01522 Polysaccharide deacetylase TD68_10255 PF01980 tRNA-methyltransferase O TD68_10260 PF09335 SNARE associated Golgi protein TD68_10265 PF04542 Sigma-70 region 2 TD68_10265 PF04545 Sigma-70, region 4 TD68_10270 PF04740 LXG domain of WXG superfamily TD68_10285 PF01337 Barstar (barnase inhibitor) TD68_10300 PF00005 ABC transporter TD68_10305 PF00392 Bacterial regulatory proteins, gntR family TD68_10315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TD68_10315 PF03466 LysR substrate binding domain TD68_10320 PF06314 Acetoacetate decarboxylase (ADC) TD68_10325 PF08546 Ketopantoate reductase PanE/ApbA C terminal TD68_10325 PF02558 Ketopantoate reductase PanE/ApbA TD68_10340 PF14145 YrhK-like protein TD68_10345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TD68_10345 PF03466 LysR substrate binding domain TD68_10350 PF07690 Major Facilitator Superfamily TD68_10355 PF02811 PHP domain TD68_10355 PF11490 DNA polymerase III polC-type N-terminus II TD68_10355 PF07733 Bacterial DNA polymerase III alpha NTPase domain TD68_10355 PF17657 Bacterial DNA polymerase III alpha subunit finger domain TD68_10355 PF14579 Helix-hairpin-helix motif TD68_10355 PF00929 Exonuclease TD68_10360 PF00175 Oxidoreductase NAD-binding domain TD68_10360 PF00258 Flavodoxin TD68_10360 PF00067 Cytochrome P450 TD68_10360 PF00667 FAD binding domain TD68_10365 PF00440 Bacterial regulatory proteins, tetR family TD68_10365 PF16295 Tetracyclin repressor-like, C-terminal domain TD68_10370 PF08241 Methyltransferase domain TD68_10375 PF01226 Formate/nitrite transporter TD68_10380 PF10057 Uncharacterized conserved protein (DUF2294) TD68_10385 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TD68_10385 PF01568 Molydopterin dinucleotide binding domain TD68_10385 PF00037 4Fe-4S binding domain TD68_10385 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TD68_10385 PF00384 Molybdopterin oxidoreductase TD68_10390 PF07849 Protein of unknown function (DUF1641) TD68_10395 PF14143 YrhC-like protein TD68_10400 PF01053 Cys/Met metabolism PLP-dependent enzyme TD68_10405 PF00291 Pyridoxal-phosphate dependent enzyme TD68_10410 PF01048 Phosphorylase superfamily TD68_10415 PF13649 Methyltransferase domain TD68_10420 PF10750 Protein of unknown function (DUF2536) TD68_10425 PF07423 Domain of unknown function (DUF1510) TD68_10430 PF00905 Penicillin binding protein transpeptidase domain TD68_10430 PF03717 Penicillin-binding Protein dimerisation domain TD68_10435 PF03449 Transcription elongation factor, N-terminal TD68_10435 PF01272 Transcription elongation factor, GreA/GreB, C-term TD68_10440 PF00485 Phosphoribulokinase / Uridine kinase family TD68_10460 PF02618 YceG-like family TD68_10465 PF06949 Protein of unknown function (DUF1292) TD68_10470 PF03652 Holliday junction resolvase TD68_10475 PF06135 IreB regulatory phosphoprotein TD68_10480 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TD68_10480 PF02272 DHHA1 domain TD68_10480 PF01411 tRNA synthetases class II (A) TD68_10485 PF01594 AI-2E family transporter TD68_10490 PF00005 ABC transporter TD68_10495 PF00497 Bacterial extracellular solute-binding proteins, family 3 TD68_10500 PF00528 Binding-protein-dependent transport system inner membrane component TD68_10505 PF00528 Binding-protein-dependent transport system inner membrane component TD68_10515 PF05239 PRC-barrel domain TD68_10520 PF14490 Helix-hairpin-helix containing domain TD68_10520 PF13538 UvrD-like helicase C-terminal domain TD68_10520 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain TD68_10525 PF07719 Tetratricopeptide repeat TD68_10525 PF13181 Tetratricopeptide repeat TD68_10535 PF00266 Aminotransferase class-V TD68_10540 PF02082 Transcriptional regulator TD68_10545 PF16193 AAA C-terminal domain TD68_10545 PF05496 Holliday junction DNA helicase RuvB P-loop domain TD68_10545 PF12002 MgsA AAA+ ATPase C terminal TD68_10550 PF00899 ThiF family TD68_10555 PF00152 tRNA synthetases class II (D, K and N) TD68_10555 PF02938 GAD domain TD68_10555 PF01336 OB-fold nucleic acid binding domain TD68_10560 PF13393 Histidyl-tRNA synthetase TD68_10560 PF03129 Anticodon binding domain TD68_10565 PF01520 N-acetylmuramoyl-L-alanine amidase TD68_10565 PF08239 Bacterial SH3 domain TD68_10570 PF02580 D-Tyr-tRNA(Tyr) deacylase TD68_10575 PF02824 TGS domain TD68_10575 PF13291 ACT domain TD68_10575 PF04607 Region found in RelA / SpoT proteins TD68_10580 PF00156 Phosphoribosyl transferase domain TD68_10585 PF01368 DHH family TD68_10585 PF10141 Single-strand DNA-specific exonuclease, C terminal domain TD68_10585 PF17768 RecJ OB domain TD68_10585 PF02272 DHHA1 domain TD68_10590 PF06305 Lipopolysaccharide assembly protein A domain TD68_10595 PF02080 TrkA-C domain TD68_10600 PF02355 Protein export membrane protein TD68_10600 PF07549 SecD/SecF GG Motif TD68_10605 PF13797 Post-transcriptional regulator TD68_10610 PF14667 Polysaccharide biosynthesis C-terminal domain TD68_10610 PF01943 Polysaccharide biosynthesis protein TD68_10615 PF04239 Protein of unknown function (DUF421) TD68_10620 PF12670 Protein of unknown function (DUF3792) TD68_10625 PF02699 Preprotein translocase subunit TD68_10630 PF01702 Queuine tRNA-ribosyltransferase TD68_10635 PF02547 Queuosine biosynthesis protein TD68_10640 PF11146 Protein of unknown function (DUF2905) TD68_10645 PF05496 Holliday junction DNA helicase RuvB P-loop domain TD68_10645 PF05491 RuvB C-terminal winged helix domain TD68_10645 PF17864 RuvB AAA lid domain TD68_10650 PF01330 RuvA N terminal domain TD68_10650 PF07499 RuvA, C-terminal domain TD68_10655 PF08977 Bypass of Forespore C, N terminal TD68_10655 PF08955 BofC C-terminal domain TD68_10660 PF07690 Major Facilitator Superfamily TD68_10675 PF01235 Sodium:alanine symporter family TD68_10680 PF01709 Transcriptional regulator TD68_10685 PF06483 Chitinase C TD68_10685 PF00704 Glycosyl hydrolases family 18 TD68_10690 PF00704 Glycosyl hydrolases family 18 TD68_10690 PF00041 Fibronectin type III domain TD68_10695 PF04794 YdjC-like protein TD68_10705 PF02056 Family 4 glycosyl hydrolase TD68_10705 PF11975 Family 4 glycosyl hydrolase C-terminal domain TD68_10710 PF02378 Phosphotransferase system, EIIC TD68_10715 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit TD68_10720 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TD68_10725 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) TD68_10730 PF01476 LysM domain TD68_10735 PF02445 Quinolinate synthetase A protein TD68_10740 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain TD68_10740 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain TD68_10745 PF02910 Fumarate reductase flavoprotein C-term TD68_10745 PF00890 FAD binding domain TD68_10750 PF00266 Aminotransferase class-V TD68_10755 PF08279 HTH domain TD68_10755 PF02829 3H domain TD68_10760 PF00800 Prephenate dehydratase TD68_10760 PF01842 ACT domain TD68_10765 PF01842 ACT domain TD68_10770 PF01926 50S ribosome-binding GTPase TD68_10770 PF01018 GTP1/OBG TD68_10770 PF09269 Domain of unknown function (DUF1967) TD68_10775 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain TD68_10775 PF14682 Sporulation initiation phospho-transferase B, C-terminal TD68_10780 PF01016 Ribosomal L27 protein TD68_10785 PF04327 Cysteine protease Prp TD68_10790 PF00829 Ribosomal prokaryotic L21 protein TD68_10795 PF02163 Peptidase family M50 TD68_10800 PF01551 Peptidase family M23 TD68_10805 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TD68_10810 PF03775 Septum formation inhibitor MinC, C-terminal domain TD68_10815 PF04093 rod shape-determining protein MreD TD68_10820 PF04085 rod shape-determining protein MreC TD68_10830 PF00633 Helix-hairpin-helix motif TD68_10830 PF04002 RadC-like JAB domain TD68_10835 PF02545 Maf-like protein TD68_10840 PF05036 Sporulation related domain TD68_10845 PF06750 Bacterial Peptidase A24 N-terminal domain TD68_10845 PF01478 Type IV leader peptidase family TD68_10850 PF02875 Mur ligase family, glutamate ligase domain TD68_10850 PF08245 Mur ligase middle domain TD68_10855 PF00133 tRNA synthetases class I (I, L, M and V) TD68_10855 PF08264 Anticodon-binding domain of tRNA TD68_10855 PF10458 Valyl tRNA synthetase tRNA binding arm TD68_10870 PF01476 LysM domain TD68_10870 PF01476 LysM domain TD68_10875 PF00202 Aminotransferase class-III TD68_10880 PF00490 Delta-aminolevulinic acid dehydratase TD68_10885 PF02602 Uroporphyrinogen-III synthase HemD TD68_10890 PF03900 Porphobilinogen deaminase, C-terminal domain TD68_10890 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain TD68_10895 PF01578 Cytochrome C assembly protein TD68_10900 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain TD68_10900 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain TD68_10900 PF01488 Shikimate / quinate 5-dehydrogenase TD68_10910 PF01926 50S ribosome-binding GTPase TD68_10915 PF00004 ATPase family associated with various cellular activities (AAA) TD68_10915 PF05362 Lon protease (S16) C-terminal proteolytic domain TD68_10915 PF02190 ATP-dependent protease La (LON) substrate-binding domain TD68_10920 PF00004 ATPase family associated with various cellular activities (AAA) TD68_10920 PF05362 Lon protease (S16) C-terminal proteolytic domain TD68_10925 PF07724 AAA domain (Cdc48 subfamily) TD68_10925 PF06689 ClpX C4-type zinc finger TD68_10925 PF10431 C-terminal, D2-small domain, of ClpB protein TD68_10930 PF05698 Bacterial trigger factor protein (TF) C-terminus TD68_10930 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TD68_10930 PF05697 Bacterial trigger factor protein (TF) TD68_10940 PF00694 Aconitase C-terminal domain TD68_10945 PF00330 Aconitase family (aconitate hydratase) TD68_10950 PF00180 Isocitrate/isopropylmalate dehydrogenase TD68_10955 PF08502 LeuA allosteric (dimerisation) domain TD68_10955 PF00682 HMGL-like TD68_10960 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain TD68_10960 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain TD68_10965 PF01842 ACT domain TD68_10965 PF10369 Small subunit of acetolactate synthase TD68_10970 PF00205 Thiamine pyrophosphate enzyme, central domain TD68_10970 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TD68_10970 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TD68_10975 PF00583 Acetyltransferase (GNAT) family TD68_10980 PF11181 Heat induced stress protein YflT TD68_10980 PF09557 Domain of unknown function (DUF2382) TD68_10990 PF12850 Calcineurin-like phosphoesterase superfamily domain TD68_10995 PF01725 Ham1 family TD68_11000 PF03725 3' exoribonuclease family, domain 2 TD68_11000 PF01138 3' exoribonuclease family, domain 1 TD68_11005 PF10646 Sporulation and spore germination TD68_11010 PF01177 Asp/Glu/Hydantoin racemase TD68_11015 PF01047 MarR family TD68_11020 PF00196 Bacterial regulatory proteins, luxR family TD68_11025 PF03061 Thioesterase superfamily TD68_11030 PF13085 2Fe-2S iron-sulfur cluster binding domain TD68_11030 PF13183 4Fe-4S dicluster domain TD68_11035 PF00890 FAD binding domain TD68_11035 PF02910 Fumarate reductase flavoprotein C-term TD68_11040 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit TD68_11045 PF10702 Protein of unknown function (DUF2507) TD68_11050 PF00696 Amino acid kinase family TD68_11050 PF13840 ACT domain TD68_11050 PF01842 ACT domain TD68_11055 PF08459 UvrC Helix-hairpin-helix N-terminal TD68_11055 PF02151 UvrB/uvrC motif TD68_11055 PF01541 GIY-YIG catalytic domain TD68_11060 PF00085 Thioredoxin TD68_11065 PF06964 Alpha-L-arabinofuranosidase C-terminal domain TD68_11070 PF00766 Electron transfer flavoprotein FAD-binding domain TD68_11070 PF01012 Electron transfer flavoprotein domain TD68_11075 PF01012 Electron transfer flavoprotein domain TD68_11080 PF00378 Enoyl-CoA hydratase/isomerase TD68_11085 PF00440 Bacterial regulatory proteins, tetR family TD68_11085 PF08359 YsiA-like protein, C-terminal region TD68_11090 PF13193 AMP-binding enzyme C-terminal domain TD68_11090 PF00501 AMP-binding enzyme TD68_11095 PF03994 Domain of Unknown Function (DUF350) TD68_11100 PF01713 Smr domain TD68_11100 PF00488 MutS domain V TD68_11105 PF02811 PHP domain TD68_11105 PF14791 DNA polymerase beta thumb TD68_11105 PF14716 Helix-hairpin-helix domain TD68_11110 PF02674 Colicin V production protein TD68_11115 PF05164 Cell division protein ZapA TD68_11120 PF01351 Ribonuclease HII TD68_11120 PF11858 Domain of unknown function (DUF3378) TD68_11125 PF03483 B3/4 domain TD68_11125 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain TD68_11125 PF03147 Ferredoxin-fold anticodon binding domain TD68_11125 PF01588 Putative tRNA binding domain TD68_11125 PF03484 tRNA synthetase B5 domain TD68_11130 PF01409 tRNA synthetases class II core domain (F) TD68_11130 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain TD68_11135 PF08032 RNA 2'-O ribose methyltransferase substrate binding TD68_11135 PF00588 SpoU rRNA Methylase family TD68_11140 PF14098 Small, acid-soluble spore protein I TD68_11145 PF05651 Putative sugar diacid recognition TD68_11145 PF17853 GGDEF-like domain TD68_11145 PF13556 PucR C-terminal helix-turn-helix domain TD68_11150 PF01565 FAD binding domain TD68_11150 PF02913 FAD linked oxidases, C-terminal domain TD68_11155 PF02754 Cysteine-rich domain TD68_11155 PF13183 4Fe-4S dicluster domain TD68_11160 PF12681 Glyoxalase-like domain TD68_11165 PF13722 5TM C-terminal transporter carbon starvation CstA TD68_11165 PF02554 Carbon starvation protein CstA TD68_11170 PF06964 Alpha-L-arabinofuranosidase C-terminal domain TD68_11175 PF00528 Binding-protein-dependent transport system inner membrane component TD68_11180 PF00528 Binding-protein-dependent transport system inner membrane component TD68_11185 PF01547 Bacterial extracellular solute-binding protein TD68_11190 PF13685 Iron-containing alcohol dehydrogenase TD68_11195 PF13344 Haloacid dehalogenase-like hydrolase TD68_11200 PF00596 Class II Aldolase and Adducin N-terminal domain TD68_11205 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TD68_11205 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TD68_11210 PF11762 L-arabinose isomerase C-terminal domain TD68_11210 PF02610 L-arabinose isomerase TD68_11215 PF00753 Metallo-beta-lactamase superfamily TD68_11225 PF01425 Amidase TD68_11235 PF04616 Glycosyl hydrolases family 43 TD68_11240 PF05343 M42 glutamyl aminopeptidase TD68_11250 PF06961 Protein of unknown function (DUF1294) TD68_11255 PF00453 Ribosomal protein L20 TD68_11260 PF01632 Ribosomal protein L35 TD68_11265 PF05198 Translation initiation factor IF-3, N-terminal domain TD68_11265 PF00707 Translation initiation factor IF-3, C-terminal domain TD68_11280 PF04172 LrgB-like family TD68_11285 PF03788 LrgA family TD68_11290 PF04397 LytTr DNA-binding domain TD68_11290 PF00072 Response regulator receiver domain TD68_11295 PF07694 5TMR of 5TMR-LYT TD68_11295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TD68_11295 PF06580 Histidine kinase TD68_11305 PF03129 Anticodon binding domain TD68_11305 PF02824 TGS domain TD68_11305 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TD68_11305 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TD68_11310 PF08812 YtxC-like family TD68_11315 PF09335 SNARE associated Golgi protein TD68_11320 PF07319 Primosomal protein DnaI N-terminus TD68_11320 PF01695 IstB-like ATP binding protein TD68_11325 PF07261 Replication initiation and membrane attachment TD68_11330 PF03477 ATP cone domain TD68_11335 PF02675 S-adenosylmethionine decarboxylase TD68_11340 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain TD68_11340 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TD68_11345 PF01638 HxlR-like helix-turn-helix TD68_11350 PF07690 Major Facilitator Superfamily TD68_11355 PF00248 Aldo/keto reductase family TD68_11360 PF01121 Dephospho-CoA kinase TD68_11365 PF02659 Putative manganese efflux pump TD68_11370 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain TD68_11370 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain TD68_11370 PF06827 Zinc finger found in FPG and IleRS TD68_11375 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain TD68_11375 PF01367 5'-3' exonuclease, C-terminal SAM fold TD68_11375 PF00476 DNA polymerase family A TD68_11380 PF00512 His Kinase A (phospho-acceptor) domain TD68_11380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TD68_11380 PF00989 PAS fold TD68_11380 PF16736 Single Cache-like TD68_11385 PF00072 Response regulator receiver domain TD68_11385 PF00486 Transcriptional regulatory protein, C terminal TD68_11390 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain TD68_11390 PF00056 lactate/malate dehydrogenase, NAD binding domain TD68_11395 PF00180 Isocitrate/isopropylmalate dehydrogenase TD68_11400 PF00285 Citrate synthase, C-terminal domain TD68_11405 PF04284 Protein of unknown function (DUF441) TD68_11410 PF01594 AI-2E family transporter TD68_11415 PF04186 FxsA cytoplasmic membrane protein TD68_11420 PF00391 PEP-utilising enzyme, mobile domain TD68_11420 PF00224 Pyruvate kinase, barrel domain TD68_11420 PF02887 Pyruvate kinase, alpha/beta domain TD68_11425 PF00365 Phosphofructokinase TD68_11430 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit TD68_11435 PF01039 Carboxyl transferase domain TD68_11435 PF17848 Acetyl-coA carboxylase zinc finger domain TD68_11440 PF00390 Malic enzyme, N-terminal domain TD68_11440 PF03949 Malic enzyme, NAD binding domain TD68_11445 PF14579 Helix-hairpin-helix motif TD68_11445 PF02811 PHP domain TD68_11445 PF17657 Bacterial DNA polymerase III alpha subunit finger domain TD68_11445 PF01336 OB-fold nucleic acid binding domain TD68_11445 PF07733 Bacterial DNA polymerase III alpha NTPase domain TD68_11450 PF14034 Sporulation protein YtrH TD68_11465 PF01368 DHH family TD68_11465 PF02272 DHHA1 domain TD68_11470 PF14007 YtpI-like protein TD68_11475 PF00392 Bacterial regulatory proteins, gntR family TD68_11475 PF00571 CBS domain TD68_11475 PF03061 Thioesterase superfamily TD68_11475 PF07085 DRTGG domain TD68_11490 PF14698 Argininosuccinate lyase C-terminal TD68_11490 PF00206 Lyase TD68_11495 PF00764 Arginosuccinate synthase TD68_11500 PF00994 Probable molybdopterin binding domain TD68_11505 PF00871 Acetokinase family TD68_11510 PF02384 N-6 DNA Methylase TD68_11515 PF08534 Redoxin TD68_11520 PF09579 Sporulation protein YtfJ (Spore_YtfJ) TD68_11525 PF11167 Protein of unknown function (DUF2953) TD68_11530 PF06271 RDD family TD68_11535 PF01343 Peptidase family S49 TD68_11540 PF01513 ATP-NAD kinase TD68_11545 PF07969 Amidohydrolase family TD68_11550 PF00501 AMP-binding enzyme TD68_11550 PF13193 AMP-binding enzyme C-terminal domain TD68_11555 PF00269 Small, acid-soluble spore proteins, alpha/beta type TD68_11560 PF02568 Thiamine biosynthesis protein (ThiI) TD68_11560 PF02926 THUMP domain TD68_11565 PF00266 Aminotransferase class-V TD68_11570 PF05525 Branched-chain amino acid transport protein TD68_11575 PF06160 Septation ring formation regulator, EzrA TD68_11580 PF02811 PHP domain TD68_11585 PF00440 Bacterial regulatory proteins, tetR family TD68_11590 PF13185 GAF domain TD68_11595 PF00990 Diguanylate cyclase, GGDEF domain TD68_11600 PF01479 S4 domain TD68_11600 PF00163 Ribosomal protein S4/S9 N-terminal domain TD68_11605 PF00561 alpha/beta hydrolase fold TD68_11610 PF01979 Amidohydrolase family TD68_11620 PF00857 Isochorismatase family TD68_11630 PF01047 MarR family TD68_11635 PF01047 MarR family TD68_11640 PF07681 DoxX TD68_11645 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TD68_11650 PF01738 Dienelactone hydrolase family TD68_11660 PF00892 EamA-like transporter family TD68_11665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TD68_11665 PF03466 LysR substrate binding domain TD68_11670 PF01479 S4 domain TD68_11670 PF00579 tRNA synthetases class I (W and Y) TD68_11675 PF00501 AMP-binding enzyme TD68_11675 PF13193 AMP-binding enzyme C-terminal domain TD68_11680 PF00583 Acetyltransferase (GNAT) family TD68_11685 PF00571 CBS domain TD68_11690 PF00850 Histone deacetylase domain TD68_11695 PF00691 OmpA family TD68_11695 PF13677 Membrane MotB of proton-channel complex MotA/MotB TD68_11700 PF01618 MotA/TolQ/ExbB proton channel family TD68_11705 PF00356 Bacterial regulatory proteins, lacI family TD68_11710 PF00793 DAHP synthetase I family TD68_11710 PF01817 Chorismate mutase type II TD68_11715 PF11009 Protein of unknown function (DUF2847) TD68_11720 PF12732 YtxH-like protein TD68_11725 PF06103 Bacterial protein of unknown function (DUF948) TD68_11730 PF01225 Mur ligase family, catalytic domain TD68_11730 PF08245 Mur ligase middle domain TD68_11730 PF02875 Mur ligase family, glutamate ligase domain TD68_11735 PF01580 FtsK/SpoIIIE family TD68_11735 PF09397 Ftsk gamma domain TD68_11735 PF17854 FtsK alpha domain TD68_11740 PF14794 Domain of unknown function (DUF4479) TD68_11740 PF01588 Putative tRNA binding domain TD68_11745 PF07285 Protein of unknown function (DUF1444) TD68_11750 PF00085 Thioredoxin TD68_11755 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ TD68_11760 PF05343 M42 glutamyl aminopeptidase TD68_11765 PF03413 Peptidase propeptide and YPEB domain TD68_11770 PF03949 Malic enzyme, NAD binding domain TD68_11770 PF00390 Malic enzyme, N-terminal domain TD68_11775 PF00753 Metallo-beta-lactamase superfamily TD68_11780 PF02390 Putative methyltransferase TD68_11785 PF14165 YtzH-like protein TD68_11790 PF01636 Phosphotransferase enzyme family TD68_11795 PF00128 Alpha amylase, catalytic domain TD68_11795 PF17999 Pullulanase N1-terminal domain TD68_11795 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) TD68_11800 PF00781 Diacylglycerol kinase catalytic domain TD68_11815 PF00291 Pyridoxal-phosphate dependent enzyme TD68_11820 PF01546 Peptidase family M20/M25/M40 TD68_11825 PF00860 Permease family TD68_11830 PF08220 DeoR-like helix-turn-helix domain TD68_11835 PF00849 RNA pseudouridylate synthase TD68_11835 PF01479 S4 domain TD68_11840 PF14667 Polysaccharide biosynthesis C-terminal domain TD68_11840 PF01943 Polysaccharide biosynthesis protein TD68_11850 PF02028 BCCT, betaine/carnitine/choline family transporter TD68_11855 PF10957 Sporulation protein Cse60 TD68_11860 PF04854 Protein of unknown function, DUF624 TD68_11865 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TD68_11865 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TD68_11875 PF07470 Glycosyl Hydrolase Family 88 TD68_11880 PF00528 Binding-protein-dependent transport system inner membrane component TD68_11890 PF13416 Bacterial extracellular solute-binding protein TD68_11895 PF00528 Binding-protein-dependent transport system inner membrane component TD68_11900 PF01370 NAD dependent epimerase/dehydratase family TD68_11905 PF00067 Cytochrome P450 TD68_11910 PF06968 Biotin and Thiamin Synthesis associated domain TD68_11910 PF04055 Radical SAM superfamily TD68_11920 PF00155 Aminotransferase class I and II TD68_11925 PF00202 Aminotransferase class-III TD68_11930 PF03744 6-carboxyhexanoate--CoA ligase TD68_11935 PF01738 Dienelactone hydrolase family TD68_11940 PF00581 Rhodanese-like domain TD68_11945 PF13603 Leucyl-tRNA synthetase, Domain 2 TD68_11945 PF09334 tRNA synthetases class I (M) TD68_11945 PF08264 Anticodon-binding domain of tRNA TD68_11945 PF00133 tRNA synthetases class I (I, L, M and V) TD68_11950 PF14074 Protein of unknown function (DUF4257) TD68_11955 PF01740 STAS domain TD68_11955 PF13426 PAS domain TD68_11960 PF07690 Major Facilitator Superfamily TD68_11965 PF04791 LMBR1-like membrane protein TD68_11970 PF02687 FtsX-like permease family TD68_11975 PF00005 ABC transporter TD68_11980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TD68_11985 PF00072 Response regulator receiver domain TD68_11985 PF00486 Transcriptional regulatory protein, C terminal TD68_11990 PF12704 MacB-like periplasmic core domain TD68_11990 PF02687 FtsX-like permease family TD68_11995 PF00005 ABC transporter TD68_12010 PF00005 ABC transporter TD68_12015 PF00392 Bacterial regulatory proteins, gntR family TD68_12020 PF10732 Protein of unknown function (DUF2524) TD68_12030 PF07690 Major Facilitator Superfamily TD68_12035 PF04055 Radical SAM superfamily TD68_12035 PF16199 Radical_SAM C-terminal domain TD68_12040 PF06962 Putative rRNA methylase TD68_12045 PF10776 Protein of unknown function (DUF2600) TD68_12050 PF12146 Serine aminopeptidase, S33 TD68_12055 PF00132 Bacterial transferase hexapeptide (six repeats) TD68_12060 PF00324 Amino acid permease TD68_12065 PF13537 Glutamine amidotransferase domain TD68_12065 PF00733 Asparagine synthase TD68_12070 PF02773 S-adenosylmethionine synthetase, C-terminal domain TD68_12070 PF00438 S-adenosylmethionine synthetase, N-terminal domain TD68_12070 PF02772 S-adenosylmethionine synthetase, central domain TD68_12075 PF01293 Phosphoenolpyruvate carboxykinase TD68_12080 PF10763 Protein of unknown function (DUF2584) TD68_12085 PF00326 Prolyl oligopeptidase family TD68_12095 PF00005 ABC transporter TD68_12100 PF00528 Binding-protein-dependent transport system inner membrane component TD68_12105 PF00293 NUDIX domain TD68_12115 PF05105 Bacteriophage holin family TD68_12120 PF00210 Ferritin-like domain TD68_12130 PF13115 YtkA-like TD68_12135 PF02664 S-Ribosylhomocysteinase (LuxS) TD68_12140 PF01809 Putative membrane protein insertion efficiency factor TD68_12145 PF00484 Carbonic anhydrase TD68_12150 PF02492 CobW/HypB/UreG, nucleotide-binding domain TD68_12150 PF07683 Cobalamin synthesis protein cobW C-terminal domain TD68_12155 PF01197 Ribosomal protein L31 TD68_12160 PF01654 Cytochrome bd terminal oxidase subunit I TD68_12165 PF02322 Cytochrome bd terminal oxidase subunit II TD68_12170 PF03330 Lytic transglycolase TD68_12175 PF00950 ABC 3 transport family TD68_12180 PF00950 ABC 3 transport family TD68_12185 PF00005 ABC transporter TD68_12190 PF01297 Zinc-uptake complex component A periplasmic TD68_12195 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain TD68_12195 PF13378 Enolase C-terminal domain-like TD68_12200 PF13193 AMP-binding enzyme C-terminal domain TD68_12200 PF00501 AMP-binding enzyme TD68_12205 PF00378 Enoyl-CoA hydratase/isomerase TD68_12210 PF00561 alpha/beta hydrolase fold TD68_12215 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TD68_12215 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TD68_12215 PF16582 Middle domain of thiamine pyrophosphate TD68_12220 PF00425 chorismate binding enzyme TD68_12225 PF01258 Prokaryotic dksA/traR C4-type zinc finger TD68_12235 PF01370 NAD dependent epimerase/dehydratase family TD68_12240 PF00534 Glycosyl transferases group 1 TD68_12240 PF13439 Glycosyltransferase Family 4 TD68_12255 PF03073 TspO/MBR family TD68_12260 PF00343 Carbohydrate phosphorylase TD68_12265 PF08323 Starch synthase catalytic domain TD68_12265 PF00534 Glycosyl transferases group 1 TD68_12270 PF00483 Nucleotidyl transferase TD68_12275 PF00483 Nucleotidyl transferase TD68_12280 PF02806 Alpha amylase, C-terminal all-beta domain TD68_12280 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) TD68_12280 PF00128 Alpha amylase, catalytic domain TD68_12405 PF09515 Thiamine transporter protein (Thia_YuaJ) TD68_12410 PF04203 Sortase domain TD68_12425 PF01145 SPFH domain / Band 7 family TD68_12425 PF15975 Flotillin TD68_12435 PF12867 DinB superfamily TD68_12445 PF00465 Iron-containing alcohol dehydrogenase TD68_12460 PF17735 Biofilm surface layer A TD68_12465 PF02080 TrkA-C domain TD68_12465 PF02254 TrkA-N domain TD68_12470 PF02386 Cation transport protein TD68_12475 PF05360 yiaA/B two helix domain TD68_12480 PF13457 GW (Gly-Tryp) dipeptide domain TD68_12480 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase TD68_12485 PF07690 Major Facilitator Superfamily TD68_12495 PF02673 Bacitracin resistance protein BacA TD68_12500 PF01594 AI-2E family transporter TD68_12505 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TD68_12505 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TD68_12510 PF01965 DJ-1/PfpI family TD68_12515 PF06134 L-rhamnose isomerase (RhaA) TD68_12520 PF05336 L-rhamnose mutarotase TD68_12525 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TD68_12525 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TD68_12530 PF00455 DeoR C terminal sensor domain TD68_12530 PF08220 DeoR-like helix-turn-helix domain TD68_12535 PF00596 Class II Aldolase and Adducin N-terminal domain TD68_12540 PF00672 HAMP domain TD68_12540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TD68_12540 PF02743 Cache domain TD68_12545 PF02743 Cache domain TD68_12545 PF00672 HAMP domain TD68_12545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TD68_12550 PF00672 HAMP domain TD68_12550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TD68_12550 PF02743 Cache domain TD68_12555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TD68_12555 PF02743 Cache domain TD68_12555 PF00672 HAMP domain TD68_12570 PF03060 Nitronate monooxygenase TD68_12575 PF01894 Uncharacterised protein family UPF0047 TD68_12580 PF16657 Maltogenic Amylase, C-terminal domain TD68_12580 PF00128 Alpha amylase, catalytic domain TD68_12585 PF01595 Cyclin M transmembrane N-terminal domain TD68_12585 PF03471 Transporter associated domain TD68_12585 PF00571 CBS domain TD68_12590 PF04298 Putative neutral zinc metallopeptidase TD68_12600 PF11458 Membrane-integrating protein Mistic TD68_12605 PF07885 Ion channel TD68_12605 PF02254 TrkA-N domain TD68_12610 PF08868 YugN-like family TD68_12620 PF00342 Phosphoglucose isomerase TD68_12625 PF00465 Iron-containing alcohol dehydrogenase TD68_12630 PF00465 Iron-containing alcohol dehydrogenase TD68_12635 PF04070 Domain of unknown function (DUF378) TD68_12640 PF00575 S1 RNA binding domain TD68_12645 PF00155 Aminotransferase class I and II TD68_12650 PF01037 Lrp/AsnC ligand binding domain TD68_12655 PF08386 TAP-like protein TD68_12655 PF00561 alpha/beta hydrolase fold TD68_12660 PF08958 Domain of unknown function (DUF1871) TD68_12665 PF00155 Aminotransferase class I and II TD68_12670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TD68_12670 PF00512 His Kinase A (phospho-acceptor) domain TD68_12675 PF08810 Kinase associated protein B TD68_12680 PF00929 Exonuclease TD68_12690 PF07690 Major Facilitator Superfamily TD68_12695 PF00905 Penicillin binding protein transpeptidase domain TD68_12695 PF00912 Transglycosylase TD68_12700 PF04134 Protein of unknown function, DUF393 TD68_12705 PF17328 Family of unknown function (DUF5366) TD68_12710 PF17203 Single cache domain 3 TD68_12710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TD68_12710 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain TD68_12710 PF00989 PAS fold TD68_12715 PF00072 Response regulator receiver domain TD68_12740 PF03390 2-hydroxycarboxylate transporter family TD68_12750 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus TD68_12750 PF00361 Proton-conducting membrane transporter TD68_12750 PF13244 Domain of unknown function (DUF4040) TD68_12755 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter TD68_12760 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L TD68_12765 PF00361 Proton-conducting membrane transporter TD68_12770 PF01899 Na+/H+ ion antiporter subunit TD68_12775 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) TD68_12780 PF03334 Na+/H+ antiporter subunit TD68_12785 PF03061 Thioesterase superfamily TD68_12790 PF00072 Response regulator receiver domain TD68_12790 PF00196 Bacterial regulatory proteins, luxR family TD68_12795 PF07730 Histidine kinase TD68_12795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TD68_12805 PF00348 Polyprenyl synthetase TD68_12810 PF08181 DegQ (SacQ) family TD68_12820 PF08668 HDOD domain TD68_12820 PF00563 EAL domain TD68_12825 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family TD68_12825 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain TD68_12825 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain TD68_12830 PF00857 Isochorismatase family TD68_12835 PF07997 Protein of unknown function (DUF1694) TD68_12840 PF14166 YueH-like protein TD68_12845 PF10676 Spore germination protein gerPA/gerPF TD68_12850 PF01594 AI-2E family transporter TD68_12855 PF10842 Protein of unknown function (DUF2642) TD68_12860 PF01966 HD domain TD68_12865 PF00106 short chain dehydrogenase TD68_12870 PF17355 Family of unknown function (DUF5383) TD68_12880 PF13556 PucR C-terminal helix-turn-helix domain TD68_12880 PF06018 CodY GAF-like domain TD68_12880 PF17853 GGDEF-like domain TD68_12885 PF05222 Alanine dehydrogenase/PNT, N-terminal domain TD68_12885 PF01262 Alanine dehydrogenase/PNT, C-terminal domain TD68_12890 PF10042 Uncharacterized conserved protein (DUF2278) TD68_12895 PF03621 MbtH-like protein TD68_12900 PF00668 Condensation domain TD68_12900 PF13193 AMP-binding enzyme C-terminal domain TD68_12900 PF00550 Phosphopantetheine attachment site TD68_12900 PF00975 Thioesterase domain TD68_12900 PF00501 AMP-binding enzyme TD68_12905 PF00857 Isochorismatase family TD68_12905 PF00550 Phosphopantetheine attachment site TD68_12910 PF13193 AMP-binding enzyme C-terminal domain TD68_12910 PF00501 AMP-binding enzyme TD68_12915 PF00425 chorismate binding enzyme TD68_12920 PF00106 short chain dehydrogenase TD68_12925 PF00756 Putative esterase TD68_12930 PF14184 Regulatory protein YrvL TD68_12935 PF13783 Domain of unknown function (DUF4177) TD68_12940 PF00174 Oxidoreductase molybdopterin binding domain TD68_12945 PF02632 BioY family TD68_12950 PF13726 Na+-H+ antiporter family TD68_12950 PF03553 Na+/H+ antiporter family TD68_12955 PF02789 Cytosol aminopeptidase family, N-terminal domain TD68_12955 PF00883 Cytosol aminopeptidase family, catalytic domain TD68_12960 PF02681 Divergent PAP2 family TD68_12965 PF06725 3D domain TD68_12970 PF14068 Putative membrane protein TD68_12975 PF07992 Pyridine nucleotide-disulphide oxidoreductase TD68_12980 PF07992 Pyridine nucleotide-disulphide oxidoreductase TD68_12985 PF00478 IMP dehydrogenase / GMP reductase domain TD68_12990 PF01521 Iron-sulphur cluster biosynthesis TD68_12995 PF01678 Diaminopimelate epimerase TD68_13000 PF01773 Na+ dependent nucleoside transporter N-terminus TD68_13000 PF07662 Na+ dependent nucleoside transporter C-terminus TD68_13005 PF07293 Protein of unknown function (DUF1450) TD68_13010 PF07992 Pyridine nucleotide-disulphide oxidoreductase TD68_13015 PF05870 Phenolic acid decarboxylase (PAD) TD68_13020 PF07315 Protein of unknown function (DUF1462) TD68_13025 PF01106 NifU-like domain TD68_13030 PF00326 Prolyl oligopeptidase family TD68_13030 PF07676 WD40-like Beta Propeller Repeat TD68_13035 PF00288 GHMP kinases N terminal domain TD68_13035 PF08544 GHMP kinases C terminal TD68_13040 PF00291 Pyridoxal-phosphate dependent enzyme TD68_13045 PF03447 Homoserine dehydrogenase, NAD binding domain TD68_13045 PF01842 ACT domain TD68_13045 PF00742 Homoserine dehydrogenase TD68_13055 PF04608 Phosphatidylglycerophosphatase A TD68_13060 PF13344 Haloacid dehalogenase-like hydrolase TD68_13065 PF01934 Protein of unknown function DUF86 TD68_13070 PF06265 Protein of unknown function (DUF1027) TD68_13075 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) TD68_13080 PF04055 Radical SAM superfamily TD68_13080 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family TD68_13085 PF01551 Peptidase family M23 TD68_13090 PF09560 Sporulation protein YunB (Spo_YunB) TD68_13095 PF08827 Domain of unknown function (DUF1805) TD68_13100 PF02872 5'-nucleotidase, C-terminal domain TD68_13105 PF01925 Sulfite exporter TauE/SafE TD68_13110 PF01904 Protein of unknown function DUF72 TD68_13125 PF01979 Amidohydrolase family TD68_13130 PF17853 GGDEF-like domain TD68_13130 PF07905 Purine catabolism regulatory protein-like family TD68_13130 PF13556 PucR C-terminal helix-turn-helix domain TD68_13135 PF00860 Permease family TD68_13140 PF04542 Sigma-70 region 2 TD68_13140 PF08281 Sigma-70, region 4 TD68_13195 PF00005 ABC transporter TD68_13205 PF01799 [2Fe-2S] binding domain TD68_13205 PF00111 2Fe-2S iron-sulfur cluster binding domain TD68_13220 PF02625 XdhC and CoxI family TD68_13220 PF13478 XdhC Rossmann domain TD68_13225 PF07690 Major Facilitator Superfamily TD68_13230 PF00266 Aminotransferase class-V TD68_13235 PF01546 Peptidase family M20/M25/M40 TD68_13240 PF00591 Glycosyl transferase family, a/b domain TD68_13240 PF02885 Glycosyl transferase family, helical bundle domain TD68_13245 PF04231 Endonuclease I TD68_13255 PF03459 TOBE domain TD68_13255 PF17912 MalK OB fold domain TD68_13255 PF00005 ABC transporter TD68_13260 PF00392 Bacterial regulatory proteins, gntR family TD68_13260 PF07702 UTRA domain TD68_13265 PF00294 pfkB family carbohydrate kinase TD68_13270 PF00528 Binding-protein-dependent transport system inner membrane component TD68_13275 PF00528 Binding-protein-dependent transport system inner membrane component TD68_13280 PF01547 Bacterial extracellular solute-binding protein TD68_13285 PF01380 SIS domain TD68_13290 PF01541 GIY-YIG catalytic domain TD68_13295 PF01266 FAD dependent oxidoreductase TD68_13300 PF01458 Uncharacterized protein family (UPF0051) TD68_13305 PF01592 NifU-like N terminal domain TD68_13310 PF00266 Aminotransferase class-V TD68_13315 PF01458 Uncharacterized protein family (UPF0051) TD68_13320 PF00005 ABC transporter TD68_13325 PF02627 Carboxymuconolactone decarboxylase family TD68_13330 PF03180 NLPA lipoprotein TD68_13335 PF00528 Binding-protein-dependent transport system inner membrane component TD68_13340 PF00005 ABC transporter TD68_13340 PF09383 NIL domain TD68_13345 PF02036 SCP-2 sterol transfer family TD68_13350 PF00085 Thioredoxin TD68_13355 PF01751 Toprim domain TD68_13360 PF10830 Protein of unknown function (DUF2553) TD68_13365 PF01597 Glycine cleavage H-protein TD68_13370 PF03960 ArsC family TD68_13375 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TD68_13375 PF02770 Acyl-CoA dehydrogenase, middle domain TD68_13375 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TD68_13380 PF00108 Thiolase, N-terminal domain TD68_13380 PF02803 Thiolase, C-terminal domain TD68_13385 PF00378 Enoyl-CoA hydratase/isomerase TD68_13385 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TD68_13385 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain TD68_13390 PF01619 Proline dehydrogenase TD68_13400 PF07875 Coat F domain TD68_13405 PF01047 MarR family TD68_13410 PF07690 Major Facilitator Superfamily TD68_13415 PF10835 Protein of unknown function (DUF2573) TD68_13420 PF00005 ABC transporter TD68_13425 PF14039 YusW-like protein TD68_13435 PF00106 short chain dehydrogenase TD68_13440 PF00210 Ferritin-like domain TD68_13445 PF13180 PDZ domain TD68_13450 PF00072 Response regulator receiver domain TD68_13450 PF00486 Transcriptional regulatory protein, C terminal TD68_13455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TD68_13455 PF00512 His Kinase A (phospho-acceptor) domain TD68_13455 PF00672 HAMP domain TD68_13460 PF00440 Bacterial regulatory proteins, tetR family TD68_13465 PF10415 Fumarase C C-terminus TD68_13465 PF00206 Lyase TD68_13470 PF13113 Protein of unknown function (DUF3970) TD68_13475 PF03323 Bacillus/Clostridium GerA spore germination protein TD68_13480 PF03845 Spore germination protein TD68_13485 PF05504 Spore germination B3/ GerAC like, C-terminal TD68_13490 PF00196 Bacterial regulatory proteins, luxR family TD68_13490 PF00072 Response regulator receiver domain TD68_13495 PF00672 HAMP domain TD68_13495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TD68_13495 PF07730 Histidine kinase TD68_13500 PF09922 Cell wall-active antibiotics response 4TMS YvqF TD68_13505 PF13349 Putative adhesin TD68_13510 PF04012 PspA/IM30 family TD68_13520 PF07690 Major Facilitator Superfamily TD68_13525 PF01923 Cobalamin adenosyltransferase TD68_13530 PF00005 ABC transporter TD68_13535 PF01032 FecCD transport family TD68_13540 PF01497 Periplasmic binding protein TD68_13545 PF00106 short chain dehydrogenase TD68_13550 PF08450 SMP-30/Gluconolactonase/LRE-like region TD68_13555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TD68_13555 PF00512 His Kinase A (phospho-acceptor) domain TD68_13560 PF00072 Response regulator receiver domain TD68_13560 PF00486 Transcriptional regulatory protein, C terminal TD68_13570 PF04545 Sigma-70, region 4 TD68_13575 PF00190 Cupin TD68_13580 PF14184 Regulatory protein YrvL TD68_13585 PF12704 MacB-like periplasmic core domain TD68_13585 PF02687 FtsX-like permease family TD68_13590 PF00005 ABC transporter TD68_13595 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TD68_13600 PF00005 ABC transporter TD68_13605 PF01032 FecCD transport family TD68_13610 PF01032 FecCD transport family TD68_13615 PF01497 Periplasmic binding protein TD68_13620 PF13520 Amino acid permease TD68_13625 PF09575 Small spore protein J (Spore_SspJ) TD68_13635 PF04307 LexA-binding, inner membrane-associated putative hydrolase TD68_13640 PF00884 Sulfatase TD68_13645 PF12727 PBP superfamily domain TD68_13645 PF12728 Helix-turn-helix domain TD68_13655 PF00528 Binding-protein-dependent transport system inner membrane component TD68_13665 PF00248 Aldo/keto reductase family TD68_13675 PF00999 Sodium/hydrogen exchanger family TD68_13685 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain TD68_13685 PF01077 Nitrite and sulphite reductase 4Fe-4S domain TD68_13690 PF00258 Flavodoxin TD68_13690 PF00667 FAD binding domain TD68_13690 PF00175 Oxidoreductase NAD-binding domain TD68_13695 PF13538 UvrD-like helicase C-terminal domain TD68_13700 PF03458 UPF0126 domain TD68_13710 PF02600 Disulfide bond formation protein DsbB TD68_13715 PF13462 Thioredoxin TD68_13720 PF00403 Heavy-metal-associated domain TD68_13725 PF00403 Heavy-metal-associated domain TD68_13730 PF00403 Heavy-metal-associated domain TD68_13735 PF02583 Metal-sensitive transcriptional repressor TD68_13740 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TD68_13740 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TD68_13745 PF02525 Flavodoxin-like fold TD68_13755 PF01047 MarR family TD68_13760 PF17314 Family of unknown function (DUF5360) TD68_13765 PF00893 Small Multidrug Resistance protein TD68_13770 PF00440 Bacterial regulatory proteins, tetR family TD68_13775 PF00535 Glycosyl transferase family 2 TD68_13775 PF01501 Glycosyl transferase family 8 TD68_13780 PF01668 SmpB protein TD68_13785 PF08206 Ribonuclease B OB domain TD68_13785 PF17876 Cold shock domain TD68_13785 PF00773 RNB domain TD68_13785 PF00575 S1 RNA binding domain TD68_13790 PF12146 Serine aminopeptidase, S33 TD68_13795 PF03840 Preprotein translocase SecG subunit TD68_13800 PF01381 Helix-turn-helix TD68_13815 PF01638 HxlR-like helix-turn-helix TD68_13820 PF12729 Four helix bundle sensory module for signal transduction TD68_13820 PF00672 HAMP domain TD68_13820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TD68_13825 PF00528 Binding-protein-dependent transport system inner membrane component TD68_13830 PF04069 Substrate binding domain of ABC-type glycine betaine transport system TD68_13835 PF00528 Binding-protein-dependent transport system inner membrane component TD68_13840 PF00005 ABC transporter TD68_13840 PF00571 CBS domain TD68_13845 PF12802 MarR family TD68_13850 PF00528 Binding-protein-dependent transport system inner membrane component TD68_13855 PF04069 Substrate binding domain of ABC-type glycine betaine transport system TD68_13860 PF00528 Binding-protein-dependent transport system inner membrane component TD68_13865 PF00571 CBS domain TD68_13865 PF00005 ABC transporter TD68_13870 PF12802 MarR family TD68_13875 PF01914 MarC family integral membrane protein TD68_13885 PF13240 zinc-ribbon domain TD68_13890 PF00583 Acetyltransferase (GNAT) family TD68_13905 PF02585 GlcNAc-PI de-N-acetylase TD68_13920 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TD68_13925 PF01370 NAD dependent epimerase/dehydratase family TD68_13930 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TD68_13935 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain TD68_13935 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain TD68_13935 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TD68_13940 PF02225 PA domain TD68_13940 PF04389 Peptidase family M28 TD68_13945 PF03952 Enolase, N-terminal domain TD68_13945 PF00113 Enolase, C-terminal TIM barrel domain TD68_13950 PF06415 BPG-independent PGAM N-terminus (iPGM_N) TD68_13950 PF01676 Metalloenzyme superfamily TD68_13955 PF00121 Triosephosphate isomerase TD68_13960 PF00162 Phosphoglycerate kinase TD68_13965 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TD68_13965 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain TD68_13970 PF04198 Putative sugar-binding domain TD68_13975 PF00083 Sugar (and other) transporter TD68_13980 PF00392 Bacterial regulatory proteins, gntR family TD68_13985 PF00296 Luciferase-like monooxygenase TD68_13990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TD68_13990 PF03466 LysR substrate binding domain TD68_13995 PF00892 EamA-like transporter family TD68_14000 PF00324 Amino acid permease TD68_14005 PF00704 Glycosyl hydrolases family 18 TD68_14010 PF02589 LUD domain TD68_14015 PF11870 Domain of unknown function (DUF3390) TD68_14015 PF13183 4Fe-4S dicluster domain TD68_14015 PF02589 LUD domain TD68_14020 PF02754 Cysteine-rich domain TD68_14025 PF07729 FCD domain TD68_14025 PF00392 Bacterial regulatory proteins, gntR family TD68_14030 PF02652 L-lactate permease TD68_14035 PF04552 Sigma-54, DNA binding domain TD68_14035 PF04963 Sigma-54 factor, core binding domain TD68_14035 PF00309 Sigma-54 factor, Activator interacting domain (AID) TD68_14040 PF09628 YvfG protein TD68_14045 PF04230 Polysaccharide pyruvyl transferase TD68_14050 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TD68_14055 PF00132 Bacterial transferase hexapeptide (six repeats) TD68_14055 PF17836 PglD N-terminal domain TD68_14060 PF02397 Bacterial sugar transferase TD68_14065 PF14667 Polysaccharide biosynthesis C-terminal domain TD68_14065 PF01943 Polysaccharide biosynthesis protein TD68_14070 PF00535 Glycosyl transferase family 2 TD68_14075 PF04230 Polysaccharide pyruvyl transferase TD68_14080 PF00535 Glycosyl transferase family 2 TD68_14090 PF13439 Glycosyltransferase Family 4 TD68_14090 PF00534 Glycosyl transferases group 1 TD68_14095 PF00535 Glycosyl transferase family 2 TD68_14100 PF13439 Glycosyltransferase Family 4 TD68_14100 PF00534 Glycosyl transferases group 1 TD68_14105 PF02719 Polysaccharide biosynthesis protein TD68_14110 PF13614 AAA domain TD68_14115 PF02706 Chain length determinant protein TD68_14120 PF08671 Anti-repressor SinI TD68_14120 PF01381 Helix-turn-helix TD68_14140 PF00005 ABC transporter TD68_14160 PF00561 alpha/beta hydrolase fold TD68_14165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TD68_14165 PF03466 LysR substrate binding domain TD68_14170 PF02435 Levansucrase/Invertase TD68_14175 PF08244 Glycosyl hydrolases family 32 C terminal TD68_14175 PF00251 Glycosyl hydrolases family 32 N-terminal domain TD68_14180 PF13520 Amino acid permease TD68_14185 PF00440 Bacterial regulatory proteins, tetR family TD68_14185 PF17934 Tetracyclin repressor-like, C-terminal domain TD68_14190 PF00893 Small Multidrug Resistance protein TD68_14195 PF00893 Small Multidrug Resistance protein TD68_14200 PF13302 Acetyltransferase (GNAT) domain TD68_14215 PF00574 Clp protease TD68_14220 PF01965 DJ-1/PfpI family TD68_14225 PF03641 Possible lysine decarboxylase TD68_14230 PF03819 MazG nucleotide pyrophosphohydrolase domain TD68_14235 PF01740 STAS domain TD68_14235 PF00916 Sulfate permease family TD68_14240 PF00484 Carbonic anhydrase TD68_14245 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TD68_14245 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TD68_14250 PF02687 FtsX-like permease family TD68_14255 PF00005 ABC transporter TD68_14260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TD68_14265 PF00486 Transcriptional regulatory protein, C terminal TD68_14265 PF00072 Response regulator receiver domain TD68_14270 PF00545 ribonuclease TD68_14275 PF00797 N-acetyltransferase TD68_14280 PF00381 PTS HPr component phosphorylation site TD68_14285 PF02650 WhiA C-terminal HTH domain TD68_14285 PF14527 WhiA LAGLIDADG-like domain TD68_14285 PF10298 WhiA N-terminal LAGLIDADG-like domain TD68_14290 PF01933 Uncharacterised protein family UPF0052 TD68_14295 PF03668 P-loop ATPase protein family TD68_14300 PF00293 NUDIX domain TD68_14305 PF07992 Pyridine nucleotide-disulphide oxidoreductase TD68_14310 PF00877 NlpC/P60 family TD68_14320 PF00664 ABC transporter transmembrane region TD68_14320 PF00005 ABC transporter TD68_14330 PF00583 Acetyltransferase (GNAT) family TD68_14335 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase TD68_14335 PF01502 Phosphoribosyl-AMP cyclohydrolase TD68_14340 PF00977 Histidine biosynthesis protein TD68_14345 PF00977 Histidine biosynthesis protein TD68_14350 PF00117 Glutamine amidotransferase class-I TD68_14355 PF00475 Imidazoleglycerol-phosphate dehydratase TD68_14360 PF00815 Histidinol dehydrogenase TD68_14365 PF01634 ATP phosphoribosyltransferase TD68_14370 PF13393 Histidyl-tRNA synthetase TD68_14375 PF13529 Peptidase_C39 like family TD68_14380 PF03211 Pectate lyase TD68_14385 PF14602 Hexapeptide repeat of succinyl-transferase TD68_14390 PF13419 Haloacid dehalogenase-like hydrolase TD68_14395 PF07670 Nucleoside recognition TD68_14400 PF01790 Prolipoprotein diacylglyceryl transferase TD68_14405 PF02603 HPr Serine kinase N terminus TD68_14405 PF07475 HPr Serine kinase C-terminal domain TD68_14410 PF01979 Amidohydrolase family TD68_14415 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase TD68_14425 PF00149 Calcineurin-like phosphoesterase TD68_14430 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV TD68_14435 PF04024 PspC domain TD68_14440 PF13349 Putative adhesin TD68_14455 PF00005 ABC transporter TD68_14455 PF17755 UvrA DNA-binding domain TD68_14455 PF17760 UvrA interaction domain TD68_14460 PF12344 Ultra-violet resistance protein B TD68_14460 PF00271 Helicase conserved C-terminal domain TD68_14460 PF04851 Type III restriction enzyme, res subunit TD68_14460 PF17757 UvrB interaction domain TD68_14460 PF02151 UvrB/uvrC motif TD68_14465 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) TD68_14470 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain TD68_14470 PF00391 PEP-utilising enzyme, mobile domain TD68_14475 PF00440 Bacterial regulatory proteins, tetR family TD68_14480 PF07690 Major Facilitator Superfamily TD68_14485 PF17735 Biofilm surface layer A TD68_14495 PF17820 PDZ domain TD68_14500 PF17423 Swarming motility protein TD68_14505 PF17820 PDZ domain TD68_14505 PF03572 Peptidase family S41 TD68_14505 PF01471 Putative peptidoglycan binding domain TD68_14510 PF02687 FtsX-like permease family TD68_14510 PF18075 FtsX extracellular domain TD68_14515 PF00005 ABC transporter TD68_14520 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TD68_14525 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 TD68_14525 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) TD68_14530 PF03462 PCRF domain TD68_14530 PF00472 RF-1 domain TD68_14535 PF02810 SEC-C motif TD68_14535 PF07517 SecA DEAD-like domain TD68_14535 PF01043 SecA preprotein cross-linking domain TD68_14535 PF07516 SecA Wing and Scaffold domain TD68_14540 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein TD68_14540 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus TD68_14555 PF02561 Flagellar protein FliS TD68_14560 PF07196 Flagellin hook IN motif TD68_14560 PF02465 Flagellar hook-associated protein 2 N-terminus TD68_14560 PF07195 Flagellar hook-associated protein 2 C-terminus TD68_14565 PF03646 FlaG protein TD68_14570 PF00669 Bacterial flagellin N-terminal helical region TD68_14570 PF00700 Bacterial flagellin C-terminal helical region TD68_14575 PF02599 Global regulator protein family TD68_14580 PF02623 FliW protein TD68_14590 PF00669 Bacterial flagellin N-terminal helical region TD68_14590 PF00700 Bacterial flagellin C-terminal helical region TD68_14595 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TD68_14595 PF00460 Flagella basal body rod protein TD68_14600 PF05130 FlgN protein TD68_14605 PF04316 Anti-sigma-28 factor, FlgM TD68_14620 PF10719 Late competence development protein ComFB TD68_14625 PF04851 Type III restriction enzyme, res subunit TD68_14625 PF00271 Helicase conserved C-terminal domain TD68_14630 PF02645 Uncharacterised protein, DegV family COG1307 TD68_14635 PF00196 Bacterial regulatory proteins, luxR family TD68_14635 PF00072 Response regulator receiver domain TD68_14640 PF05384 Sensor protein DegS TD68_14640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TD68_14640 PF07730 Histidine kinase TD68_14645 PF01205 Uncharacterized protein family UPF0029 TD68_14645 PF09186 Domain of unknown function (DUF1949) TD68_14650 PF03816 Cell envelope-related transcriptional attenuator domain TD68_14655 PF00953 Glycosyl transferase family 4 TD68_14665 PF00535 Glycosyl transferase family 2 TD68_14670 PF02706 Chain length determinant protein TD68_14675 PF04932 O-Antigen ligase TD68_14680 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain TD68_14680 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain TD68_14680 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TD68_14685 PF00534 Glycosyl transferases group 1 TD68_14685 PF13439 Glycosyltransferase Family 4 TD68_14690 PF14667 Polysaccharide biosynthesis C-terminal domain TD68_14690 PF01943 Polysaccharide biosynthesis protein TD68_14695 PF02397 Bacterial sugar transferase TD68_14705 PF01520 N-acetylmuramoyl-L-alanine amidase TD68_14705 PF04122 Putative cell wall binding repeat 2 TD68_14710 PF04122 Putative cell wall binding repeat 2 TD68_14710 PF08486 Stage II sporulation protein TD68_14720 PF03816 Cell envelope-related transcriptional attenuator domain TD68_14725 PF02350 UDP-N-acetylglucosamine 2-epimerase TD68_14730 PF00483 Nucleotidyl transferase TD68_14735 PF00005 ABC transporter TD68_14740 PF01061 ABC-2 type transporter TD68_14745 PF00535 Glycosyl transferase family 2 TD68_14745 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase TD68_14750 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase TD68_14755 PF01467 Cytidylyltransferase-like TD68_14760 PF03808 Glycosyl transferase WecB/TagA/CpsF family TD68_14765 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase TD68_14770 PF05036 Sporulation related domain TD68_14770 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase TD68_14770 PF08239 Bacterial SH3 domain TD68_14775 PF01238 Phosphomannose isomerase type I TD68_14780 PF03323 Bacillus/Clostridium GerA spore germination protein TD68_14785 PF03845 Spore germination protein TD68_14790 PF05504 Spore germination B3/ GerAC like, C-terminal TD68_14800 PF00083 Sugar (and other) transporter TD68_14805 PF03816 Cell envelope-related transcriptional attenuator domain TD68_14815 PF00877 NlpC/P60 family TD68_14820 PF09587 Bacterial capsule synthesis protein PGA_cap TD68_14825 PF14102 Capsule biosynthesis CapC TD68_14830 PF08245 Mur ligase middle domain TD68_14835 PF03323 Bacillus/Clostridium GerA spore germination protein TD68_14840 PF03845 Spore germination protein TD68_14850 PF00356 Bacterial regulatory proteins, lacI family TD68_14855 PF00294 pfkB family carbohydrate kinase TD68_14860 PF05025 RbsD / FucU transport protein family TD68_14865 PF00005 ABC transporter TD68_14870 PF02653 Branched-chain amino acid transport system / permease component TD68_14875 PF13407 Periplasmic binding protein domain TD68_14880 PF08239 Bacterial SH3 domain TD68_14885 PF13031 Protein of unknown function (DUF3892) TD68_14890 PF02525 Flavodoxin-like fold TD68_14895 PF03306 Alpha-acetolactate decarboxylase TD68_14900 PF00205 Thiamine pyrophosphate enzyme, central domain TD68_14900 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TD68_14900 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TD68_14905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TD68_14905 PF03466 LysR substrate binding domain TD68_14910 PF08757 CotH kinase protein TD68_14920 PF01613 Flavin reductase like domain TD68_14925 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TD68_14930 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TD68_14940 PF00834 Ribulose-phosphate 3 epimerase family TD68_14945 PF13789 Domain of unknown function (DUF4181) TD68_14955 PF13404 AsnC-type helix-turn-helix domain TD68_14955 PF01037 Lrp/AsnC ligand binding domain TD68_14960 PF02417 Chromate transporter TD68_14965 PF02417 Chromate transporter TD68_14975 PF03358 NADPH-dependent FMN reductase TD68_14980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TD68_14980 PF03466 LysR substrate binding domain TD68_15005 PF14431 YwqJ-like deaminase TD68_15005 PF04740 LXG domain of WXG superfamily TD68_15005 PF14449 Pre-toxin TG TD68_15015 PF16888 Domain of unknown function (DUF5082) TD68_15025 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain TD68_15025 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain TD68_15025 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TD68_15035 PF13614 AAA domain TD68_15040 PF13807 G-rich domain on putative tyrosine kinase TD68_15040 PF02706 Chain length determinant protein TD68_15045 PF04434 SWIM zinc finger TD68_15050 PF00176 SNF2 family N-terminal domain TD68_15050 PF12419 SNF2 Helicase protein TD68_15050 PF00271 Helicase conserved C-terminal domain TD68_15060 PF08220 DeoR-like helix-turn-helix domain TD68_15060 PF00455 DeoR C terminal sensor domain TD68_15065 PF00436 Single-strand binding protein family TD68_15075 PF14183 YwpF-like protein TD68_15080 PF01741 Large-conductance mechanosensitive channel, MscL TD68_15085 PF07977 FabA-like domain TD68_15090 PF18801 response regulator aspartate phosphatase H, N terminal TD68_15095 PF00460 Flagella basal body rod protein TD68_15095 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TD68_15100 PF00460 Flagella basal body rod protein TD68_15100 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TD68_15110 PF12116 Stage III sporulation protein D TD68_15115 PF01047 MarR family TD68_15120 PF07690 Major Facilitator Superfamily TD68_15125 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin TD68_15130 PF07690 Major Facilitator Superfamily TD68_15135 PF00857 Isochorismatase family TD68_15145 PF00909 Ammonium Transporter Family TD68_15150 PF00543 Nitrogen regulatory protein P-II TD68_15155 PF01098 Cell cycle protein TD68_15160 PF01569 PAP2 superfamily TD68_15165 PF04892 VanZ like family TD68_15170 PF01551 Peptidase family M23 TD68_15175 PF00583 Acetyltransferase (GNAT) family TD68_15180 PF17319 Family of unknown function (DUF5362) TD68_15185 PF02719 Polysaccharide biosynthesis protein TD68_15190 PF16363 GDP-mannose 4,6 dehydratase TD68_15195 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TD68_15200 PF02348 Cytidylyltransferase TD68_15215 PF08666 SAF domain TD68_15215 PF03102 NeuB family TD68_15220 PF17370 Family of unknown function (DUF5392) TD68_15225 PF13396 Phospholipase_D-nuclease N-terminal TD68_15225 PF13091 PLD-like domain TD68_15230 PF07739 TipAS antibiotic-recognition domain TD68_15230 PF13411 MerR HTH family regulatory protein TD68_15235 PF17319 Family of unknown function (DUF5362) TD68_15240 PF13460 NAD(P)H-binding TD68_15250 PF01979 Amidohydrolase family TD68_15250 PF00449 Urease alpha-subunit, N-terminal domain TD68_15255 PF00699 Urease beta subunit TD68_15260 PF00547 Urease, gamma subunit TD68_15265 PF05532 CsbD-like TD68_15275 PF17874 MalT-like TPR region TD68_15275 PF18801 response regulator aspartate phosphatase H, N terminal TD68_15280 PF04055 Radical SAM superfamily TD68_15280 PF06463 Molybdenum Cofactor Synthesis C TD68_15285 PF02634 FdhD/NarQ family TD68_15290 PF00092 von Willebrand factor type A domain TD68_15295 PF00092 von Willebrand factor type A domain TD68_15300 PF08486 Stage II sporulation protein TD68_15305 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TD68_15310 PF08680 TATA-box binding TD68_15315 PF06612 Protein of unknown function (DUF1146) TD68_15325 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain TD68_15325 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain TD68_15330 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TD68_15330 PF02874 ATP synthase alpha/beta family, beta-barrel domain TD68_15335 PF00231 ATP synthase TD68_15340 PF00306 ATP synthase alpha/beta chain, C terminal domain TD68_15340 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TD68_15340 PF02874 ATP synthase alpha/beta family, beta-barrel domain TD68_15345 PF00213 ATP synthase delta (OSCP) subunit TD68_15350 PF00430 ATP synthase B/B' CF(0) TD68_15355 PF00137 ATP synthase subunit C TD68_15360 PF00119 ATP synthase A chain TD68_15365 PF03899 ATP synthase I chain TD68_15375 PF00464 Serine hydroxymethyltransferase TD68_15380 PF04260 Protein of unknown function (DUF436) TD68_15385 PF02502 Ribose/Galactose Isomerase TD68_15390 PF01451 Low molecular weight phosphotyrosine protein phosphatase TD68_15395 PF02659 Putative manganese efflux pump TD68_15400 PF03481 Putative GTP-binding controlling metal-binding TD68_15400 PF01300 Telomere recombination TD68_15410 PF09551 Stage II sporulation protein R (spore_II_R) TD68_15415 PF17094 Uncharacterised protein family (UPF0715) TD68_15420 PF17247 Family of unknown function (DUF5316) TD68_15425 PF17827 PrmC N-terminal domain TD68_15425 PF05175 Methyltransferase small domain TD68_15430 PF00472 RF-1 domain TD68_15430 PF03462 PCRF domain TD68_15435 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TD68_15440 PF13411 MerR HTH family regulatory protein TD68_15445 PF03547 Membrane transport protein TD68_15450 PF00390 Malic enzyme, N-terminal domain TD68_15450 PF03949 Malic enzyme, NAD binding domain TD68_15455 PF00265 Thymidine kinase TD68_15460 PF01197 Ribosomal protein L31 TD68_15465 PF07498 Rho termination factor, N-terminal domain TD68_15465 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TD68_15465 PF07497 Rho termination factor, RNA-binding domain TD68_15470 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded TD68_15475 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TD68_15480 PF00923 Transaldolase/Fructose-6-phosphate aldolase TD68_15485 PF01116 Fructose-bisphosphate aldolase class-II TD68_15490 PF00072 Response regulator receiver domain TD68_15495 PF10740 Domain of unknown function (DUF2529) TD68_15500 PF06418 CTP synthase N-terminus TD68_15500 PF00117 Glutamine amidotransferase class-I TD68_15505 PF05066 HB1, ASXL, restriction endonuclease HTH domain TD68_15510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TD68_15510 PF02770 Acyl-CoA dehydrogenase, middle domain TD68_15510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TD68_15515 PF02754 Cysteine-rich domain TD68_15515 PF13183 4Fe-4S dicluster domain TD68_15520 PF13091 PLD-like domain TD68_15525 PF03851 UV-endonuclease UvdE TD68_15535 PF01872 RibD C-terminal domain TD68_15540 PF00005 ABC transporter TD68_15540 PF00664 ABC transporter transmembrane region TD68_15545 PF13396 Phospholipase_D-nuclease N-terminal TD68_15545 PF13091 PLD-like domain TD68_15550 PF02665 Nitrate reductase gamma subunit TD68_15555 PF02613 Nitrate reductase delta subunit TD68_15560 PF14711 Respiratory nitrate reductase beta C-terminal TD68_15560 PF13247 4Fe-4S dicluster domain TD68_15565 PF14710 Respiratory nitrate reductase alpha N-terminal TD68_15565 PF01568 Molydopterin dinucleotide binding domain TD68_15565 PF00384 Molybdopterin oxidoreductase TD68_15575 PF14256 YwiC-like protein TD68_15580 PF00027 Cyclic nucleotide-binding domain TD68_15580 PF00325 Bacterial regulatory proteins, crp family TD68_15585 PF07690 Major Facilitator Superfamily TD68_15590 PF03485 Arginyl tRNA synthetase N terminal domain TD68_15590 PF05746 DALR anticodon binding domain TD68_15590 PF00750 tRNA synthetases class I (R) TD68_15595 PF09148 Domain of unknown function (DUF1934) TD68_15600 PF11420 Bacteriocin subtilosin A TD68_15605 PF04055 Radical SAM superfamily TD68_15605 PF05402 Coenzyme PQQ synthesis protein D (PqqD) TD68_15605 PF13186 Iron-sulfur cluster-binding domain TD68_15615 PF00005 ABC transporter TD68_15630 PF00675 Insulinase (Peptidase family M16) TD68_15650 PF07563 Protein of unknown function (DUF1541) TD68_15655 PF18801 response regulator aspartate phosphatase H, N terminal TD68_15665 PF04073 Aminoacyl-tRNA editing domain TD68_15670 PF00491 Arginase family TD68_15675 PF17284 Spermidine synthase tetramerisation domain TD68_15680 PF00912 Transglycosylase TD68_15680 PF00905 Penicillin binding protein transpeptidase domain TD68_15685 PF08741 YwhD family TD68_15690 PF02163 Peptidase family M50 TD68_15695 PF01361 Tautomerase enzyme TD68_15700 PF01047 MarR family TD68_15705 PF13520 Amino acid permease TD68_15715 PF01966 HD domain TD68_15720 PF07293 Protein of unknown function (DUF1450) TD68_15730 PF00892 EamA-like transporter family TD68_15735 PF03099 Biotin/lipoate A/B protein ligase family TD68_15740 PF03466 LysR substrate binding domain TD68_15740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TD68_15745 PF03601 Conserved hypothetical protein 698 TD68_15750 PF01515 Phosphate acetyl/butaryl transferase TD68_15760 PF07690 Major Facilitator Superfamily TD68_15765 PF07690 Major Facilitator Superfamily TD68_15770 PF17735 Biofilm surface layer A TD68_15775 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase TD68_15780 PF04321 RmlD substrate binding domain TD68_15785 PF16363 GDP-mannose 4,6 dehydratase TD68_15790 PF00483 Nucleotidyl transferase TD68_15795 PF00583 Acetyltransferase (GNAT) family TD68_15800 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase TD68_15805 PF00535 Glycosyl transferase family 2 TD68_15810 PF09671 Spore coat protein (Spore_GerQ) TD68_15815 PF04241 Protein of unknown function (DUF423) TD68_15820 PF00860 Permease family TD68_15825 PF17261 Family of unknown function (DUF5327) TD68_15830 PF00171 Aldehyde dehydrogenase family TD68_15835 PF03167 Uracil DNA glycosylase superfamily TD68_15840 PF00535 Glycosyl transferase family 2 TD68_15850 PF03551 Transcriptional regulator PadR-like family TD68_15855 PF08543 Phosphomethylpyrimidine kinase TD68_15865 PF14602 Hexapeptide repeat of succinyl-transferase TD68_15865 PF12464 Maltose acetyltransferase TD68_15870 PF08244 Glycosyl hydrolases family 32 C terminal TD68_15870 PF00251 Glycosyl hydrolases family 32 N-terminal domain TD68_15875 PF02378 Phosphotransferase system, EIIC TD68_15875 PF00367 phosphotransferase system, EIIB TD68_15880 PF01226 Formate/nitrite transporter TD68_15885 PF00874 PRD domain TD68_15885 PF03123 CAT RNA binding domain TD68_15895 PF05922 Peptidase inhibitor I9 TD68_15895 PF00082 Subtilase family TD68_15895 PF13860 FlgD Ig-like domain TD68_15895 PF02225 PA domain TD68_15905 PF00296 Luciferase-like monooxygenase TD68_15910 PF00881 Nitroreductase family TD68_15915 PF01098 Cell cycle protein TD68_15925 PF17368 Spore morphogenesis and germination YwcE TD68_15930 PF03626 Prokaryotic Cytochrome C oxidase subunit IV TD68_15935 PF00510 Cytochrome c oxidase subunit III TD68_15940 PF00115 Cytochrome C and Quinol oxidase polypeptide I TD68_15945 PF02790 Cytochrome C oxidase subunit II, transmembrane domain TD68_15945 PF00116 Cytochrome C oxidase subunit II, periplasmic domain TD68_15950 PF04226 Transglycosylase associated protein TD68_15955 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain TD68_15955 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain TD68_15960 PF08544 GHMP kinases C terminal TD68_15960 PF10509 Galactokinase galactose-binding signature TD68_15960 PF00288 GHMP kinases N terminal domain TD68_15965 PF04138 GtrA-like protein TD68_15970 PF00440 Bacterial regulatory proteins, tetR family TD68_15975 PF08671 Anti-repressor SinI TD68_15990 PF04341 Protein of unknown function, DUF485 TD68_15995 PF00474 Sodium:solute symporter family TD68_16000 PF01323 DSBA-like thioredoxin domain TD68_16005 PF02581 Thiamine monophosphate synthase TD68_16010 PF02110 Hydroxyethylthiazole kinase family TD68_16015 PF03466 LysR substrate binding domain TD68_16015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TD68_16020 PF03788 LrgA family TD68_16025 PF04172 LrgB-like family TD68_16030 PF00005 ABC transporter TD68_16050 PF04172 LrgB-like family TD68_16055 PF09962 Uncharacterized conserved protein (DUF2196) TD68_16060 PF17785 PUA-like domain TD68_16060 PF10672 S-adenosylmethionine-dependent methyltransferase TD68_16065 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TD68_16070 PF02378 Phosphotransferase system, EIIC TD68_16080 PF00367 phosphotransferase system, EIIB TD68_16080 PF02378 Phosphotransferase system, EIIC TD68_16085 PF00874 PRD domain TD68_16085 PF03123 CAT RNA binding domain TD68_16090 PF01501 Glycosyl transferase family 8 TD68_16095 PF09529 Integral membrane protein (intg_mem_TP0381) TD68_16100 PF02225 PA domain TD68_16100 PF04389 Peptidase family M28 TD68_16105 PF18801 response regulator aspartate phosphatase H, N terminal TD68_16110 PF01047 MarR family TD68_16115 PF01479 S4 domain TD68_16115 PF00579 tRNA synthetases class I (W and Y) TD68_16120 PF04607 Region found in RelA / SpoT proteins TD68_16125 PF01040 UbiA prenyltransferase family TD68_16130 PF02254 TrkA-N domain TD68_16130 PF02080 TrkA-C domain TD68_16135 PF12459 D-Ala-teichoic acid biosynthesis protein TD68_16140 PF00501 AMP-binding enzyme TD68_16140 PF13193 AMP-binding enzyme C-terminal domain TD68_16145 PF03062 MBOAT, membrane-bound O-acyltransferase family TD68_16150 PF00550 Phosphopantetheine attachment site TD68_16155 PF04914 DltD protein TD68_16160 PF01063 Amino-transferase class IV TD68_16165 PF11975 Family 4 glycosyl hydrolase C-terminal domain TD68_16165 PF02056 Family 4 glycosyl hydrolase TD68_16170 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit TD68_16175 PF02378 Phosphotransferase system, EIIC TD68_16180 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TD68_16185 PF05043 Mga helix-turn-helix domain TD68_16185 PF00874 PRD domain TD68_16185 PF08279 HTH domain TD68_16185 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TD68_16190 PF02245 Methylpurine-DNA glycosylase (MPG) TD68_16200 PF00199 Catalase TD68_16200 PF06628 Catalase-related immune-responsive TD68_16210 PF12679 ABC-2 family transporter protein TD68_16215 PF00005 ABC transporter TD68_16215 PF13732 Domain of unknown function (DUF4162) TD68_16220 PF13396 Phospholipase_D-nuclease N-terminal TD68_16230 PF17280 Family of unknown function (DUF5345) TD68_16235 PF04542 Sigma-70 region 2 TD68_16235 PF08281 Sigma-70, region 4 TD68_16240 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin TD68_16245 PF01256 Carbohydrate kinase TD68_16250 PF00664 ABC transporter transmembrane region TD68_16250 PF00005 ABC transporter TD68_16255 PF00664 ABC transporter transmembrane region TD68_16255 PF00005 ABC transporter TD68_16260 PF02322 Cytochrome bd terminal oxidase subunit II TD68_16265 PF01654 Cytochrome bd terminal oxidase subunit I TD68_16270 PF03390 2-hydroxycarboxylate transporter family TD68_16280 PF01522 Polysaccharide deacetylase TD68_16285 PF03459 TOBE domain TD68_16285 PF17912 MalK OB fold domain TD68_16285 PF00005 ABC transporter TD68_16290 PF13556 PucR C-terminal helix-turn-helix domain TD68_16300 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 TD68_16300 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) TD68_16310 PF16363 GDP-mannose 4,6 dehydratase TD68_16320 PF07730 Histidine kinase TD68_16325 PF00196 Bacterial regulatory proteins, luxR family TD68_16325 PF00072 Response regulator receiver domain TD68_16330 PF07687 Peptidase dimerisation domain TD68_16330 PF01546 Peptidase family M20/M25/M40 TD68_16340 PF04525 LURP-one-related TD68_16345 PF18801 response regulator aspartate phosphatase H, N terminal TD68_16350 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TD68_16360 PF11799 impB/mucB/samB family C-terminal domain TD68_16360 PF00817 impB/mucB/samB family TD68_16360 PF11798 IMS family HHH motif TD68_16390 PF18277 AbrB C-terminal domain TD68_16390 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin TD68_16400 PF01717 Cobalamin-independent synthase, Catalytic domain TD68_16405 PF00158 Sigma-54 interaction domain TD68_16405 PF02954 Bacterial regulatory protein, Fis family TD68_16405 PF00989 PAS fold TD68_16415 PF01144 Coenzyme A transferase TD68_16420 PF01144 Coenzyme A transferase TD68_16430 PF08241 Methyltransferase domain TD68_16435 PF01773 Na+ dependent nucleoside transporter N-terminus TD68_16435 PF07662 Na+ dependent nucleoside transporter C-terminus TD68_16450 PF00199 Catalase TD68_16450 PF06628 Catalase-related immune-responsive TD68_16450 PF18011 C-terminal domain found in long catalases TD68_16455 PF03600 Citrate transporter TD68_16465 PF00874 PRD domain TD68_16465 PF03123 CAT RNA binding domain TD68_16475 PF11700 Vacuole effluxer Atg22 like TD68_16480 PF03880 DbpA RNA binding domain TD68_16480 PF00270 DEAD/DEAH box helicase TD68_16480 PF00271 Helicase conserved C-terminal domain TD68_16490 PF00805 Pentapeptide repeats (8 copies) TD68_16495 PF13472 GDSL-like Lipase/Acylhydrolase family TD68_16515 PF05593 RHS Repeat TD68_16520 PF00544 Pectate lyase TD68_16525 PF00892 EamA-like transporter family TD68_16535 PF10014 2OG-Fe dioxygenase TD68_16550 PF00582 Universal stress protein family TD68_16555 PF00232 Glycosyl hydrolase family 1 TD68_16560 PF02378 Phosphotransferase system, EIIC TD68_16560 PF00367 phosphotransferase system, EIIB TD68_16560 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 TD68_16565 PF00155 Aminotransferase class I and II TD68_16580 PF07478 D-ala D-ala ligase C-terminus TD68_16580 PF01820 D-ala D-ala ligase N-terminus TD68_16595 PF00293 NUDIX domain TD68_16600 PF04616 Glycosyl hydrolases family 43 TD68_16600 PF16369 C-terminal lipocalin-like domain TD68_16605 PF09021 HutP TD68_16610 PF00221 Aromatic amino acid lyase TD68_16615 PF17391 Urocanase N-terminal domain TD68_16615 PF17392 Urocanase C-terminal domain TD68_16615 PF01175 Urocanase Rossmann-like domain TD68_16620 PF01979 Amidohydrolase family TD68_16625 PF00491 Arginase family TD68_16630 PF00324 Amino acid permease TD68_16635 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain TD68_16635 PF00591 Glycosyl transferase family, a/b domain TD68_16635 PF02885 Glycosyl transferase family, helical bundle domain TD68_16640 PF07662 Na+ dependent nucleoside transporter C-terminus TD68_16640 PF01773 Na+ dependent nucleoside transporter N-terminus TD68_16645 PF01791 DeoC/LacD family aldolase TD68_16650 PF04198 Putative sugar-binding domain TD68_16655 PF06724 Domain of Unknown Function (DUF1206) TD68_16660 PF04346 Ethanolamine utilisation protein, EutH TD68_16665 PF00480 ROK family TD68_16670 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family TD68_16685 PF11631 Protein of unknown function (DUF3255) TD68_16700 PF06486 Protein of unknown function (DUF1093) TD68_16705 PF02687 FtsX-like permease family TD68_16710 PF00005 ABC transporter TD68_16715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TD68_16720 PF00486 Transcriptional regulatory protein, C terminal TD68_16720 PF00072 Response regulator receiver domain TD68_16730 PF01497 Periplasmic binding protein TD68_16735 PF01116 Fructose-bisphosphate aldolase class-II TD68_16740 PF01261 Xylose isomerase-like TIM barrel TD68_16745 PF01261 Xylose isomerase-like TIM barrel TD68_16750 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TD68_16750 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TD68_16755 PF07690 Major Facilitator Superfamily TD68_16760 PF01261 Xylose isomerase-like TIM barrel TD68_16765 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TD68_16765 PF00205 Thiamine pyrophosphate enzyme, central domain TD68_16765 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TD68_16770 PF00294 pfkB family carbohydrate kinase TD68_16775 PF04962 KduI/IolB family TD68_16780 PF00171 Aldehyde dehydrogenase family TD68_16785 PF08220 DeoR-like helix-turn-helix domain TD68_16785 PF00455 DeoR C terminal sensor domain TD68_16790 PF00248 Aldo/keto reductase family TD68_16810 PF00083 Sugar (and other) transporter TD68_16815 PF00183 Hsp90 protein TD68_16825 PF00440 Bacterial regulatory proteins, tetR family TD68_16830 PF00171 Aldehyde dehydrogenase family TD68_16835 PF17369 Family of unknown function (DUF5391) TD68_16840 PF06271 RDD family TD68_16845 PF04235 Protein of unknown function (DUF418) TD68_16850 PF07883 Cupin domain TD68_16855 PF00440 Bacterial regulatory proteins, tetR family TD68_16870 PF04230 Polysaccharide pyruvyl transferase TD68_16875 PF02595 Glycerate kinase family TD68_16880 PF02447 GntP family permease TD68_16885 PF17853 GGDEF-like domain TD68_16885 PF13556 PucR C-terminal helix-turn-helix domain TD68_16885 PF05651 Putative sugar diacid recognition TD68_16890 PF00392 Bacterial regulatory proteins, gntR family TD68_16890 PF07729 FCD domain TD68_16895 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TD68_16895 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TD68_16900 PF02447 GntP family permease TD68_16905 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain TD68_16905 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TD68_16915 PF00578 AhpC/TSA family TD68_16920 PF07992 Pyridine nucleotide-disulphide oxidoreductase TD68_16920 PF13192 Thioredoxin domain TD68_16930 PF00324 Amino acid permease TD68_16940 PF00005 ABC transporter TD68_16945 PF06874 Firmicute fructose-1,6-bisphosphatase TD68_16955 PF01381 Helix-turn-helix TD68_16960 PF09195 Restriction endonuclease BglII TD68_16965 PF01555 DNA methylase TD68_17000 PF02796 Helix-turn-helix domain of resolvase TD68_17000 PF00239 Resolvase, N terminal domain TD68_17030 PF01555 DNA methylase TD68_17035 PF14562 Restriction endonuclease BglI TD68_17040 PF02590 Predicted SPOUT methyltransferase TD68_17050 PF08240 Alcohol dehydrogenase GroES-like domain TD68_17050 PF00107 Zinc-binding dehydrogenase TD68_17070 PF00583 Acetyltransferase (GNAT) family TD68_17075 PF00491 Arginase family TD68_17080 PF00324 Amino acid permease TD68_17085 PF00202 Aminotransferase class-III TD68_17090 PF13630 SdpI/YhfL protein family TD68_17090 PF07853 Protein of unknown function (DUF1648) TD68_17095 PF01022 Bacterial regulatory protein, arsR family TD68_17100 PF02954 Bacterial regulatory protein, Fis family TD68_17100 PF13426 PAS domain TD68_17100 PF00158 Sigma-54 interaction domain TD68_17110 PF12848 ABC transporter TD68_17110 PF16326 ABC transporter C-terminal domain TD68_17110 PF00005 ABC transporter TD68_17125 PF00899 ThiF family TD68_17130 PF13180 PDZ domain TD68_17135 PF00753 Metallo-beta-lactamase superfamily TD68_17140 PF09648 YycH protein TD68_17145 PF07435 YycH protein TD68_17150 PF00512 His Kinase A (phospho-acceptor) domain TD68_17150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TD68_17150 PF00672 HAMP domain TD68_17150 PF13426 PAS domain TD68_17155 PF00072 Response regulator receiver domain TD68_17155 PF00486 Transcriptional regulatory protein, C terminal TD68_17180 PF00709 Adenylosuccinate synthetase TD68_17185 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TD68_17190 PF03796 DnaB-like helicase C terminal domain TD68_17190 PF00772 DnaB-like helicase N terminal domain TD68_17195 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) TD68_17205 PF07690 Major Facilitator Superfamily TD68_17210 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase TD68_17215 PF03948 Ribosomal protein L9, C-terminal domain TD68_17215 PF01281 Ribosomal protein L9, N-terminal domain TD68_17220 PF02272 DHHA1 domain TD68_17220 PF01368 DHH family TD68_17225 PF09991 Predicted membrane protein (DUF2232) TD68_17235 PF07875 Coat F domain TD68_17240 PF01638 HxlR-like helix-turn-helix TD68_17245 PF01368 DHH family TD68_17245 PF02833 DHHA2 domain TD68_17255 PF07690 Major Facilitator Superfamily TD68_17260 PF13302 Acetyltransferase (GNAT) domain TD68_17270 PF00180 Isocitrate/isopropylmalate dehydrogenase TD68_17275 PF00392 Bacterial regulatory proteins, gntR family TD68_17275 PF07729 FCD domain TD68_17280 PF13411 MerR HTH family regulatory protein TD68_17280 PF06445 GyrI-like small molecule binding domain TD68_17290 PF00072 Response regulator receiver domain TD68_17290 PF00486 Transcriptional regulatory protein, C terminal TD68_17295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TD68_17295 PF00512 His Kinase A (phospho-acceptor) domain TD68_17305 PF07690 Major Facilitator Superfamily TD68_17315 PF01206 Sulfurtransferase TusA TD68_17315 PF00581 Rhodanese-like domain TD68_17320 PF00701 Dihydrodipicolinate synthetase family TD68_17330 PF00155 Aminotransferase class I and II TD68_17330 PF00392 Bacterial regulatory proteins, gntR family TD68_17335 PF03190 Protein of unknown function, DUF255 TD68_17340 PF00083 Sugar (and other) transporter TD68_17345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TD68_17350 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family TD68_17350 PF00356 Bacterial regulatory proteins, lacI family TD68_17355 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain TD68_17355 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain TD68_17360 PF02805 Metal binding domain of Ada TD68_17360 PF12833 Helix-turn-helix domain TD68_17365 PF03372 Endonuclease/Exonuclease/phosphatase family TD68_17370 PF00892 EamA-like transporter family TD68_17375 PF07729 FCD domain TD68_17375 PF00392 Bacterial regulatory proteins, gntR family TD68_17385 PF01084 Ribosomal protein S18 TD68_17390 PF00436 Single-strand binding protein family TD68_17395 PF01250 Ribosomal protein S6 TD68_17400 PF01926 50S ribosome-binding GTPase TD68_17400 PF06071 Protein of unknown function (DUF933) TD68_17405 PF00384 Molybdopterin oxidoreductase TD68_17405 PF01568 Molydopterin dinucleotide binding domain TD68_17405 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TD68_17410 PF06107 Bacterial protein of unknown function (DUF951) TD68_17420 PF06866 Protein of unknown function (DUF1256) TD68_17425 PF02195 ParB-like nuclease domain TD68_17425 PF17762 HTH domain found in ParB protein TD68_17430 PF13614 AAA domain TD68_17435 PF06713 Bacterial PH domain TD68_17440 PF17762 HTH domain found in ParB protein TD68_17440 PF02195 ParB-like nuclease domain TD68_17445 PF02527 rRNA small subunit methyltransferase G TD68_17450 PF13932 GidA associated domain TD68_17450 PF01134 Glucose inhibited division protein A TD68_17455 PF10396 GTP-binding protein TrmE N-terminus TD68_17455 PF12631 MnmE helical domain TD68_17455 PF01926 50S ribosome-binding GTPase TD68_17460 PF01424 R3H domain TD68_17460 PF14804 Jag N-terminus TD68_17465 PF02096 60Kd inner membrane protein TD68_17470 PF00825 Ribonuclease P TD68_17475 PF00468 Ribosomal protein L34 TD68_17480 PF11638 DnaA N-terminal domain TD68_17480 PF08299 Bacterial dnaA protein helix-turn-helix TD68_17480 PF00308 Bacterial dnaA protein TD68_17485 PF02768 DNA polymerase III beta subunit, C-terminal domain TD68_17485 PF02767 DNA polymerase III beta subunit, central domain TD68_17485 PF00712 DNA polymerase III beta subunit, N-terminal domain TD68_17495 PF02463 RecF/RecN/SMC N terminal domain TD68_17500 PF04025 Domain of unknown function (DUF370) TD68_17505 PF01751 Toprim domain TD68_17505 PF00986 DNA gyrase B subunit, carboxyl terminus TD68_17505 PF00204 DNA gyrase B TD68_17505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TD68_17510 PF00521 DNA gyrase/topoisomerase IV, subunit A TD68_17510 PF03989 DNA gyrase C-terminal domain, beta-propeller TD68_17530 PF14175 YaaC-like Protein TD68_17535 PF00478 IMP dehydrogenase / GMP reductase domain TD68_17535 PF00571 CBS domain TD68_17540 PF00768 D-alanyl-D-alanine carboxypeptidase TD68_17540 PF07943 Penicillin-binding protein 5, C-terminal domain TD68_17545 PF01680 SOR/SNZ family TD68_17550 PF01174 SNO glutamine amidotransferase family TD68_17555 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TD68_17555 PF02403 Seryl-tRNA synthetase N-terminal domain TD68_17565 PF01712 Deoxynucleoside kinase TD68_17570 PF01712 Deoxynucleoside kinase TD68_17575 PF01476 LysM domain TD68_17575 PF00704 Glycosyl hydrolases family 18 TD68_17580 PF00857 Isochorismatase family TD68_17585 PF14437 MafB19-like deaminase TD68_17590 PF12169 DNA polymerase III subunits gamma and tau domain III TD68_17595 PF02575 YbaB/EbfC DNA-binding family TD68_17600 PF02132 RecR protein TD68_17600 PF13662 Toprim domain TD68_17605 PF10704 Protein of unknown function (DUF2508) TD68_17610 PF07441 SigmaK-factor processing regulatory protein BofA TD68_17630 PF10764 Inhibitor of sigma-G Gin TD68_17635 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein TD68_17640 PF05816 Toxic anion resistance protein (TelA) TD68_17645 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain TD68_17645 PF01276 Orn/Lys/Arg decarboxylase, major domain TD68_17650 PF02223 Thymidylate kinase TD68_17655 PF06153 Cyclic-di-AMP receptor TD68_17660 PF03885 Protein of unknown function (DUF327) TD68_17665 PF09115 DNA polymerase III, delta subunit, C terminal TD68_17670 PF04468 PSP1 C-terminal conserved region TD68_17675 PF06156 Initiation control protein YabA TD68_17680 PF05175 Methyltransferase small domain TD68_17685 PF01541 GIY-YIG catalytic domain TD68_17690 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TD68_17695 PF18277 AbrB C-terminal domain TD68_17695 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin TD68_17700 PF09334 tRNA synthetases class I (M) TD68_17700 PF08264 Anticodon-binding domain of tRNA TD68_17700 PF01588 Putative tRNA binding domain TD68_17705 PF01026 TatD related DNase TD68_17710 PF06725 3D domain TD68_17710 PF03990 G5-linked-Ubiquitin-like domain TD68_17710 PF07501 G5 domain TD68_17715 PF13662 Toprim domain TD68_17715 PF13331 Domain of unknown function (DUF4093) TD68_17720 PF00398 Ribosomal RNA adenine dimethylase TD68_17725 PF05582 YabG peptidase U57 TD68_17730 PF06257 Biofilm formation stimulator VEG TD68_17735 PF00269 Small, acid-soluble spore proteins, alpha/beta type TD68_17740 PF08544 GHMP kinases C terminal TD68_17740 PF00288 GHMP kinases N terminal domain TD68_17745 PF09182 Bacterial purine repressor, N-terminal TD68_17745 PF00156 Phosphoribosyl transferase domain TD68_17750 PF01042 Endoribonuclease L-PSP TD68_17755 PF04026 SpoVG TD68_17760 PF00483 Nucleotidyl transferase TD68_17760 PF00132 Bacterial transferase hexapeptide (six repeats) TD68_17765 PF14572 Phosphoribosyl synthetase-associated domain TD68_17765 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase TD68_17770 PF01386 Ribosomal L25p family TD68_17770 PF14693 Ribosomal protein TL5, C-terminal domain TD68_17775 PF01195 Peptidyl-tRNA hydrolase TD68_17780 PF10955 Protein of unknown function (DUF2757) TD68_17785 PF03461 TRCF domain TD68_17785 PF00271 Helicase conserved C-terminal domain TD68_17785 PF00270 DEAD/DEAH box helicase TD68_17785 PF02559 CarD-like/TRCF domain TD68_17785 PF17757 UvrB interaction domain TD68_17790 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin TD68_17790 PF15714 Stage V sporulation protein T C-terminal, transcription factor TD68_17795 PF14667 Polysaccharide biosynthesis C-terminal domain TD68_17795 PF01943 Polysaccharide biosynthesis protein TD68_17800 PF03819 MazG nucleotide pyrophosphohydrolase domain TD68_17800 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TD68_17805 PF01479 S4 domain TD68_17810 PF07873 YabP family TD68_17815 PF09578 Spore cortex protein YabQ (Spore_YabQ) TD68_17820 PF04977 Septum formation initiator TD68_17825 PF00575 S1 RNA binding domain TD68_17840 PF07228 Stage II sporulation protein E (SpoIIE) TD68_17845 PF00092 von Willebrand factor type A domain TD68_17850 PF00069 Protein kinase domain TD68_17855 PF01171 PP-loop family TD68_17855 PF11734 TilS substrate C-terminal domain TD68_17855 PF09179 TilS substrate binding domain TD68_17865 PF01434 Peptidase family M41 TD68_17865 PF17862 AAA+ lid domain TD68_17865 PF06480 FtsH Extracellular TD68_17865 PF00004 ATPase family associated with various cellular activities (AAA) TD68_17870 PF03309 Type III pantothenate kinase TD68_17875 PF01430 Hsp33 protein TD68_17880 PF13145 PPIC-type PPIASE domain TD68_17885 PF00291 Pyridoxal-phosphate dependent enzyme TD68_17890 PF00425 chorismate binding enzyme TD68_17890 PF04715 Anthranilate synthase component I, N terminal region TD68_17895 PF00117 Glutamine amidotransferase class-I TD68_17900 PF01063 Amino-transferase class IV TD68_17905 PF00809 Pterin binding enzyme TD68_17910 PF02152 Dihydroneopterin aldolase TD68_17915 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) TD68_17920 PF01381 Helix-turn-helix TD68_17925 PF01207 Dihydrouridine synthase (Dus) TD68_17930 PF00152 tRNA synthetases class II (D, K and N) TD68_17930 PF01336 OB-fold nucleic acid binding domain TD68_18015 PF05848 CtsR N-terminal HTH domain TD68_18015 PF17727 CtsR C-terminal dimerization domain TD68_18020 PF02151 UvrB/uvrC motif TD68_18025 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain TD68_18030 PF00004 ATPase family associated with various cellular activities (AAA) TD68_18030 PF07724 AAA domain (Cdc48 subfamily) TD68_18030 PF17871 AAA lid domain TD68_18030 PF02861 Clp amino terminal domain, pathogenicity island component TD68_18030 PF10431 C-terminal, D2-small domain, of ClpB protein TD68_18035 PF18073 Rubredoxin metal binding domain TD68_18040 PF10635 DisA bacterial checkpoint controller linker region TD68_18040 PF02457 DisA bacterial checkpoint controller nucleotide-binding TD68_18050 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TD68_18055 PF02542 YgbB family TD68_18060 PF00749 tRNA synthetases class I (E and Q), catalytic domain TD68_18065 PF00132 Bacterial transferase hexapeptide (six repeats) TD68_18065 PF06426 Serine acetyltransferase, N-terminal TD68_18070 PF09190 DALR domain TD68_18070 PF01406 tRNA synthetases class I (C) catalytic domain TD68_18075 PF00636 Ribonuclease III domain TD68_18080 PF00588 SpoU rRNA Methylase family TD68_18080 PF08032 RNA 2'-O ribose methyltransferase substrate binding TD68_18085 PF05991 YacP-like NYN domain TD68_18090 PF04542 Sigma-70 region 2 TD68_18090 PF08281 Sigma-70, region 4 TD68_18095 PF00471 Ribosomal protein L33 TD68_18100 PF00584 SecE/Sec61-gamma subunits of protein translocation complex TD68_18105 PF00467 KOW motif TD68_18105 PF02357 Transcription termination factor nusG TD68_18110 PF00298 Ribosomal protein L11, RNA binding domain TD68_18110 PF03946 Ribosomal protein L11, N-terminal domain TD68_18115 PF00687 Ribosomal protein L1p/L10e family TD68_18120 PF00466 Ribosomal protein L10 TD68_18125 PF16320 Ribosomal protein L7/L12 dimerisation domain TD68_18125 PF00542 Ribosomal protein L7/L12 C-terminal domain TD68_18130 PF05175 Methyltransferase small domain TD68_18135 PF04563 RNA polymerase beta subunit TD68_18135 PF04561 RNA polymerase Rpb2, domain 2 TD68_18135 PF04565 RNA polymerase Rpb2, domain 3 TD68_18135 PF10385 RNA polymerase beta subunit external 1 domain TD68_18135 PF00562 RNA polymerase Rpb2, domain 6 TD68_18135 PF04560 RNA polymerase Rpb2, domain 7 TD68_18140 PF04997 RNA polymerase Rpb1, domain 1 TD68_18140 PF00623 RNA polymerase Rpb1, domain 2 TD68_18140 PF04983 RNA polymerase Rpb1, domain 3 TD68_18140 PF05000 RNA polymerase Rpb1, domain 4 TD68_18140 PF04998 RNA polymerase Rpb1, domain 5 TD68_18145 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family TD68_18150 PF00164 Ribosomal protein S12/S23 TD68_18155 PF00177 Ribosomal protein S7p/S5e TD68_18160 PF03764 Elongation factor G, domain IV TD68_18160 PF00009 Elongation factor Tu GTP binding domain TD68_18160 PF00679 Elongation factor G C-terminus TD68_18160 PF03144 Elongation factor Tu domain 2 TD68_18160 PF14492 Elongation Factor G, domain II TD68_18165 PF00009 Elongation factor Tu GTP binding domain TD68_18165 PF03144 Elongation factor Tu domain 2 TD68_18165 PF03143 Elongation factor Tu C-terminal domain TD68_18170 PF12146 Serine aminopeptidase, S33 TD68_18175 PF00338 Ribosomal protein S10p/S20e TD68_18180 PF00297 Ribosomal protein L3 TD68_18185 PF00573 Ribosomal protein L4/L1 family TD68_18190 PF00276 Ribosomal protein L23 TD68_18195 PF00181 Ribosomal Proteins L2, RNA binding domain TD68_18195 PF03947 Ribosomal Proteins L2, C-terminal domain TD68_18200 PF00203 Ribosomal protein S19 TD68_18205 PF00237 Ribosomal protein L22p/L17e TD68_18210 PF00189 Ribosomal protein S3, C-terminal domain TD68_18210 PF07650 KH domain TD68_18215 PF00252 Ribosomal protein L16p/L10e TD68_18220 PF00831 Ribosomal L29 protein TD68_18225 PF00366 Ribosomal protein S17 TD68_18230 PF00238 Ribosomal protein L14p/L23e TD68_18235 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 TD68_18235 PF00467 KOW motif TD68_18240 PF00673 ribosomal L5P family C-terminus TD68_18240 PF00281 Ribosomal protein L5 TD68_18245 PF00253 Ribosomal protein S14p/S29e TD68_18250 PF00410 Ribosomal protein S8 TD68_18255 PF00347 Ribosomal protein L6 TD68_18260 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast TD68_18265 PF00333 Ribosomal protein S5, N-terminal domain TD68_18265 PF03719 Ribosomal protein S5, C-terminal domain TD68_18270 PF00327 Ribosomal protein L30p/L7e TD68_18275 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A TD68_18280 PF00344 SecY translocase TD68_18285 PF05191 Adenylate kinase, active site lid TD68_18290 PF00557 Metallopeptidase family M24 TD68_18300 PF01176 Translation initiation factor 1A / IF-1 TD68_18305 PF00444 Ribosomal protein L36 TD68_18310 PF00416 Ribosomal protein S13/S18 TD68_18315 PF00411 Ribosomal protein S11 TD68_18320 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain TD68_18320 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain TD68_18320 PF01000 RNA polymerase Rpb3/RpoA insert domain TD68_18325 PF01196 Ribosomal protein L17 TD68_18330 PF00005 ABC transporter TD68_18335 PF00005 ABC transporter TD68_18340 PF02361 Cobalt transport protein TD68_18345 PF01416 tRNA pseudouridine synthase TD68_18350 PF00572 Ribosomal protein L13 TD68_18355 PF00380 Ribosomal protein S9/S16 TD68_18360 PF08241 Methyltransferase domain TD68_18365 PF10730 Protein of unknown function (DUF2521) TD68_18370 PF01520 N-acetylmuramoyl-L-alanine amidase TD68_18375 PF10609 NUBPL iron-transfer P-loop NTPase TD68_18380 PF17898 Spore germination GerD central core domain TD68_18385 PF14089 KinB-signalling pathway activation in sporulation TD68_18390 PF01522 Polysaccharide deacetylase TD68_18420 PF07690 Major Facilitator Superfamily TD68_18435 PF00107 Zinc-binding dehydrogenase TD68_18435 PF08240 Alcohol dehydrogenase GroES-like domain TD68_18440 PF01740 STAS domain TD68_18440 PF00916 Sulfate permease family TD68_18445 PF01758 Sodium Bile acid symporter family TD68_18450 PF00756 Putative esterase TD68_18455 PF01032 FecCD transport family TD68_18460 PF01032 FecCD transport family TD68_18465 PF01497 Periplasmic binding protein TD68_18470 PF12833 Helix-turn-helix domain TD68_18470 PF01497 Periplasmic binding protein TD68_18475 PF07075 Protein of unknown function (DUF1343) TD68_18480 PF01915 Glycosyl hydrolase family 3 C-terminal domain TD68_18480 PF00933 Glycosyl hydrolase family 3 N terminal domain TD68_18485 PF00144 Beta-lactamase TD68_18490 PF00367 phosphotransferase system, EIIB TD68_18490 PF02378 Phosphotransferase system, EIIC TD68_18495 PF01380 SIS domain TD68_18495 PF01418 Helix-turn-helix domain, rpiR family TD68_18500 PF01380 SIS domain TD68_18510 PF04463 Protein of unknown function (DUF523) TD68_18540 PF04542 Sigma-70 region 2 TD68_18540 PF08281 Sigma-70, region 4 TD68_18545 PF13490 Putative zinc-finger TD68_18550 PF02457 DisA bacterial checkpoint controller nucleotide-binding TD68_18555 PF07949 YbbR-like protein TD68_18560 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TD68_18560 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TD68_18560 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TD68_18560 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TD68_18565 PF01380 SIS domain TD68_18570 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus TD68_18570 PF00361 Proton-conducting membrane transporter TD68_18575 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) TD68_18590 PF10057 Uncharacterized conserved protein (DUF2294) TD68_18600 PF07690 Major Facilitator Superfamily TD68_18615 PF00376 MerR family regulatory protein TD68_18615 PF09278 MerR, DNA binding TD68_18625 PF00501 AMP-binding enzyme TD68_18625 PF13193 AMP-binding enzyme C-terminal domain TD68_18625 PF00668 Condensation domain TD68_18625 PF00550 Phosphopantetheine attachment site TD68_18630 PF00282 Pyridoxal-dependent decarboxylase conserved domain TD68_18635 PF00248 Aldo/keto reductase family TD68_18640 PF04172 LrgB-like family TD68_18645 PF03788 LrgA family TD68_18650 PF01047 MarR family TD68_18655 PF00324 Amino acid permease TD68_18660 PF17334 Minor curli fiber component A TD68_18665 PF17340 Family of unknown function (DUF5370) TD68_18670 PF00905 Penicillin binding protein transpeptidase domain TD68_18675 PF00067 Cytochrome P450 TD68_18685 PF13520 Amino acid permease TD68_18690 PF03009 Glycerophosphoryl diester phosphodiesterase family TD68_18695 PF07690 Major Facilitator Superfamily TD68_18700 PF10852 Protein of unknown function (DUF2651) TD68_18710 PF00005 ABC transporter TD68_18715 PF00534 Glycosyl transferases group 1 TD68_18720 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase TD68_18730 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase TD68_18735 PF01467 Cytidylyltransferase-like TD68_18740 PF03808 Glycosyl transferase WecB/TagA/CpsF family TD68_18755 PF01471 Putative peptidoglycan binding domain TD68_18755 PF08924 Domain of unknown function (DUF1906) TD68_18760 PF00892 EamA-like transporter family TD68_18765 PF00465 Iron-containing alcohol dehydrogenase TD68_18770 PF02222 ATP-grasp domain TD68_18775 PF13145 PPIC-type PPIASE domain TD68_18780 PF12697 Alpha/beta hydrolase family TD68_18785 PF01066 CDP-alcohol phosphatidyltransferase TD68_18790 PF09335 SNARE associated Golgi protein TD68_18795 PF02666 Phosphatidylserine decarboxylase TD68_18800 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain TD68_18800 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TD68_18810 PF00082 Subtilase family TD68_18810 PF17936 Bacterial Ig domain TD68_18815 PF05139 Erythromycin esterase TD68_18820 PF12833 Helix-turn-helix domain TD68_18830 PF00375 Sodium:dicarboxylate symporter family TD68_18835 PF00367 phosphotransferase system, EIIB TD68_18835 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 TD68_18835 PF02378 Phosphotransferase system, EIIC TD68_18835 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 TD68_18835 PF02378 Phosphotransferase system, EIIC TD68_18835 PF00367 phosphotransferase system, EIIB TD68_18840 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase TD68_18850 PF07853 Protein of unknown function (DUF1648) TD68_18855 PF01063 Amino-transferase class IV TD68_18860 PF00324 Amino acid permease TD68_18865 PF02574 Homocysteine S-methyltransferase TD68_18870 PF01235 Sodium:alanine symporter family TD68_18875 PF04960 Glutaminase TD68_18880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TD68_18885 PF08664 YcbB domain TD68_18885 PF00072 Response regulator receiver domain TD68_18890 PF00701 Dihydrodipicolinate synthetase family TD68_18895 PF00171 Aldehyde dehydrogenase family TD68_18900 PF07690 Major Facilitator Superfamily TD68_18905 PF13378 Enolase C-terminal domain-like TD68_18910 PF00392 Bacterial regulatory proteins, gntR family TD68_18910 PF07729 FCD domain TD68_18915 PF08666 SAF domain TD68_18915 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus TD68_18920 PF01636 Phosphotransferase enzyme family TD68_18930 PF15777 Tryptophan RNA-binding attenuator protein inhibitory protein TD68_18935 PF00072 Response regulator receiver domain TD68_18935 PF00486 Transcriptional regulatory protein, C terminal TD68_18940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TD68_18940 PF00512 His Kinase A (phospho-acceptor) domain TD68_18945 PF00005 ABC transporter TD68_18960 PF10710 Protein of unknown function (DUF2512) TD68_18970 PF07486 Cell Wall Hydrolase TD68_18975 PF09423 PhoD-like phosphatase TD68_18975 PF16655 PhoD-like phosphatase, N-terminal domain TD68_18980 PF02416 mttA/Hcf106 family TD68_18985 PF00902 Sec-independent protein translocase protein (TatC) TD68_18990 PF01470 Pyroglutamyl peptidase TD68_18995 PF00266 Aminotransferase class-V TD68_19000 PF07690 Major Facilitator Superfamily TD68_19005 PF00440 Bacterial regulatory proteins, tetR family TD68_19010 PF01674 Lipase (class 2) TD68_19015 PF02810 SEC-C motif TD68_19015 PF05225 helix-turn-helix, Psq domain TD68_19020 PF00248 Aldo/keto reductase family TD68_19025 PF11611 Domain of unknown function (DUF4352) TD68_19025 PF17118 Domain of unknown function (DUF5105) TD68_19030 PF16244 Domain of unknown function (DUF4901) TD68_19035 PF01475 Ferric uptake regulator family TD68_19040 PF16244 Domain of unknown function (DUF4901) TD68_19045 PF13539 D-alanyl-D-alanine carboxypeptidase TD68_19050 PF18801 response regulator aspartate phosphatase H, N terminal TD68_19060 PF00128 Alpha amylase, catalytic domain TD68_19065 PF01297 Zinc-uptake complex component A periplasmic TD68_19070 PF00005 ABC transporter TD68_19075 PF00950 ABC 3 transport family TD68_19080 PF00296 Luciferase-like monooxygenase TD68_19085 PF02342 TerD domain TD68_19090 PF02342 TerD domain TD68_19095 PF02342 TerD domain TD68_19100 PF03741 Integral membrane protein TerC family TD68_19125 PF14266 Putative component of 'biosynthetic module' TD68_19130 PF05816 Toxic anion resistance protein (TelA) TD68_19135 PF07690 Major Facilitator Superfamily TD68_19140 PF00005 ABC transporter TD68_19140 PF00571 CBS domain TD68_19145 PF00528 Binding-protein-dependent transport system inner membrane component TD68_19150 PF04069 Substrate binding domain of ABC-type glycine betaine transport system TD68_19155 PF01546 Peptidase family M20/M25/M40 TD68_19155 PF07687 Peptidase dimerisation domain TD68_19160 PF03606 C4-dicarboxylate anaerobic carrier TD68_19170 PF00056 lactate/malate dehydrogenase, NAD binding domain TD68_19170 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain TD68_19175 PF02652 L-lactate permease TD68_19180 PF07690 Major Facilitator Superfamily TD68_19185 PF01047 MarR family TD68_19190 PF01810 LysE type translocator TD68_19195 PF08892 YqcI/YcgG family TD68_19200 PF00324 Amino acid permease TD68_19205 PF09347 Domain of unknown function (DUF1989) TD68_19210 PF02540 NAD synthase TD68_19220 PF01261 Xylose isomerase-like TIM barrel TD68_19225 PF01202 Shikimate kinase TD68_19235 PF05448 Acetyl xylan esterase (AXE1) TD68_19240 PF10127 RNA repair pathway DNA polymerase beta family TD68_19245 PF01619 Proline dehydrogenase TD68_19250 PF00171 Aldehyde dehydrogenase family TD68_19255 PF00474 Sodium:solute symporter family TD68_19260 PF13556 PucR C-terminal helix-turn-helix domain TD68_19260 PF17853 GGDEF-like domain TD68_19275 PF00005 ABC transporter TD68_19275 PF12704 MacB-like periplasmic core domain TD68_19275 PF02687 FtsX-like permease family TD68_19280 PF09323 Domain of unknown function (DUF1980) TD68_19285 PF03773 Predicted permease TD68_19290 PF00561 alpha/beta hydrolase fold TD68_19295 PF07992 Pyridine nucleotide-disulphide oxidoreductase TD68_19300 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TD68_19305 PF00355 Rieske [2Fe-2S] domain TD68_19310 PF18267 Rubredoxin NAD+ reductase C-terminal domain TD68_19310 PF07992 Pyridine nucleotide-disulphide oxidoreductase TD68_19310 PF01077 Nitrite and sulphite reductase 4Fe-4S domain TD68_19310 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain TD68_19310 PF04324 BFD-like [2Fe-2S] binding domain TD68_19315 PF01568 Molydopterin dinucleotide binding domain TD68_19315 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TD68_19315 PF00384 Molybdopterin oxidoreductase TD68_19320 PF18267 Rubredoxin NAD+ reductase C-terminal domain TD68_19320 PF07992 Pyridine nucleotide-disulphide oxidoreductase TD68_19320 PF04324 BFD-like [2Fe-2S] binding domain TD68_19320 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain TD68_19325 PF07690 Major Facilitator Superfamily TD68_19330 PF02649 Type I GTP cyclohydrolase folE2 TD68_19335 PF03734 L,D-transpeptidase catalytic domain TD68_19340 PF07683 Cobalamin synthesis protein cobW C-terminal domain TD68_19340 PF02492 CobW/HypB/UreG, nucleotide-binding domain TD68_19345 PF00528 Binding-protein-dependent transport system inner membrane component TD68_19350 PF00497 Bacterial extracellular solute-binding proteins, family 3 TD68_19355 PF13823 Alcohol dehydrogenase GroES-associated TD68_19355 PF00107 Zinc-binding dehydrogenase TD68_19355 PF08240 Alcohol dehydrogenase GroES-like domain TD68_19360 PF06271 RDD family TD68_19365 PF10925 Protein of unknown function (DUF2680) TD68_19385 PF00232 Glycosyl hydrolase family 1 TD68_19390 PF11033 Competence protein J (ComJ) TD68_19395 PF14040 Deoxyribonuclease NucA/NucB TD68_19400 PF17202 Single cache domain 3 TD68_19400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TD68_19400 PF00672 HAMP domain TD68_19405 PF01380 SIS domain TD68_19410 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family TD68_19415 PF01638 HxlR-like helix-turn-helix TD68_19420 PF00501 AMP-binding enzyme TD68_19420 PF13193 AMP-binding enzyme C-terminal domain TD68_19420 PF00668 Condensation domain TD68_19420 PF00550 Phosphopantetheine attachment site TD68_19430 PF00550 Phosphopantetheine attachment site TD68_19430 PF00501 AMP-binding enzyme TD68_19430 PF13193 AMP-binding enzyme C-terminal domain TD68_19430 PF00668 Condensation domain TD68_19430 PF00975 Thioesterase domain TD68_19435 PF00975 Thioesterase domain TD68_19445 PF00892 EamA-like transporter family TD68_19450 PF00392 Bacterial regulatory proteins, gntR family TD68_19450 PF00155 Aminotransferase class I and II TD68_19455 PF01648 4'-phosphopantetheinyl transferase superfamily TD68_19465 PF00005 ABC transporter TD68_19470 PF00528 Binding-protein-dependent transport system inner membrane component TD68_19475 PF00497 Bacterial extracellular solute-binding proteins, family 3 TD68_19480 PF03466 LysR substrate binding domain TD68_19480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TD68_19485 PF02441 Flavoprotein TD68_19490 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TD68_19505 PF00561 alpha/beta hydrolase fold TD68_19510 PF00854 POT family TD68_19515 PF12708 Pectate lyase superfamily protein TD68_19515 PF13229 Right handed beta helix region TD68_19525 PF03323 Bacillus/Clostridium GerA spore germination protein TD68_19530 PF05504 Spore germination B3/ GerAC like, C-terminal TD68_19535 PF03845 Spore germination protein TD68_19550 PF00497 Bacterial extracellular solute-binding proteins, family 3 TD68_19555 PF00528 Binding-protein-dependent transport system inner membrane component TD68_19560 PF00005 ABC transporter TD68_19570 PF03972 MmgE/PrpD family TD68_19575 PF18801 response regulator aspartate phosphatase H, N terminal TD68_19580 PF11131 Rap-phr extracellular signalling TD68_19585 PF00696 Amino acid kinase family TD68_19585 PF13840 ACT domain TD68_19590 PF01032 FecCD transport family TD68_19595 PF01032 FecCD transport family TD68_19600 PF00005 ABC transporter TD68_19605 PF01497 Periplasmic binding protein TD68_19610 PF07690 Major Facilitator Superfamily TD68_19615 PF00440 Bacterial regulatory proteins, tetR family TD68_19620 PF18801 response regulator aspartate phosphatase H, N terminal TD68_19625 PF00881 Nitroreductase family TD68_19630 PF03992 Antibiotic biosynthesis monooxygenase TD68_19635 PF01022 Bacterial regulatory protein, arsR family TD68_19640 PF00155 Aminotransferase class I and II TD68_19640 PF00392 Bacterial regulatory proteins, gntR family TD68_19645 PF00202 Aminotransferase class-III TD68_19650 PF00171 Aldehyde dehydrogenase family TD68_19655 PF06800 Sugar transport protein TD68_19665 PF07987 Domain of unkown function (DUF1775) TD68_19670 PF04234 CopC domain TD68_19670 PF13115 YtkA-like TD68_19670 PF05425 Copper resistance protein D TD68_19675 PF05573 NosL TD68_19675 PF08220 DeoR-like helix-turn-helix domain TD68_19685 PF02378 Phosphotransferase system, EIIC TD68_19685 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TD68_19690 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TD68_19695 PF01232 Mannitol dehydrogenase Rossmann domain TD68_19695 PF08125 Mannitol dehydrogenase C-terminal domain TD68_19700 PF01738 Dienelactone hydrolase family TD68_19705 PF07977 FabA-like domain TD68_19720 PF03746 LamB/YcsF family TD68_19725 PF01566 Natural resistance-associated macrophage protein TD68_19730 PF07286 Protein of unknown function (DUF1445) TD68_19735 PF02682 Carboxyltransferase domain, subdomain C and D TD68_19740 PF02626 Carboxyltransferase domain, subdomain A and B TD68_19745 PF01614 Bacterial transcriptional regulator TD68_19745 PF09339 IclR helix-turn-helix domain TD68_19750 PF13472 GDSL-like Lipase/Acylhydrolase family TD68_19755 PF13129 Protein of unknown function (DUF3953) TD68_19760 PF03992 Antibiotic biosynthesis monooxygenase TD68_19765 PF00905 Penicillin binding protein transpeptidase domain TD68_19765 PF03717 Penicillin-binding Protein dimerisation domain TD68_19765 PF05223 NTF2-like N-terminal transpeptidase domain TD68_19770 PF00248 Aldo/keto reductase family TD68_19775 PF08279 HTH domain TD68_19775 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TD68_19775 PF00874 PRD domain TD68_19775 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TD68_19775 PF05043 Mga helix-turn-helix domain TD68_19780 PF00501 AMP-binding enzyme TD68_19780 PF13193 AMP-binding enzyme C-terminal domain TD68_19785 PF13649 Methyltransferase domain TD68_19800 PF16242 Pyridoxamine 5'-phosphate oxidase like TD68_19810 PF10997 Alternate to MurJ TD68_19815 PF12823 Domain of unknown function (DUF3817) TD68_19830 PF01037 Lrp/AsnC ligand binding domain TD68_19835 PF01131 DNA topoisomerase TD68_19835 PF01751 Toprim domain TD68_19845 PF00990 Diguanylate cyclase, GGDEF domain TD68_19850 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) TD68_19860 PF03170 Bacterial cellulose synthase subunit TD68_19865 PF13520 Amino acid permease TD68_19870 PF00293 NUDIX domain TD68_19875 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TD68_19875 PF00205 Thiamine pyrophosphate enzyme, central domain TD68_19875 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TD68_19885 PF01566 Natural resistance-associated macrophage protein TD68_19890 PF04226 Transglycosylase associated protein TD68_19895 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) TD68_19900 PF12787 EcsC protein family TD68_19905 PF00477 Small hydrophilic plant seed protein TD68_19905 PF10685 Stress-induced bacterial acidophilic repeat motif TD68_19910 PF07883 Cupin domain TD68_19915 PF16291 Domain of unknown function (DUF4937 TD68_19920 PF05067 Manganese containing catalase TD68_19925 PF03480 Bacterial extracellular solute-binding protein, family 7 TD68_19930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TD68_19930 PF17203 Single cache domain 3 TD68_19930 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain TD68_19935 PF08279 HTH domain TD68_19935 PF00072 Response regulator receiver domain TD68_19940 PF00375 Sodium:dicarboxylate symporter family TD68_19945 PF01594 AI-2E family transporter TD68_19950 PF00005 ABC transporter TD68_19965 PF08028 Acyl-CoA dehydrogenase, C-terminal domain TD68_19965 PF02770 Acyl-CoA dehydrogenase, middle domain TD68_19965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TD68_19975 PF01545 Cation efflux family TD68_19975 PF16916 Dimerisation domain of Zinc Transporter TD68_19980 PF00085 Thioredoxin TD68_19985 PF01820 D-ala D-ala ligase N-terminus TD68_19985 PF07478 D-ala D-ala ligase C-terminus TD68_19990 PF01225 Mur ligase family, catalytic domain TD68_19990 PF02875 Mur ligase family, glutamate ligase domain TD68_19990 PF08245 Mur ligase middle domain TD68_20000 PF00270 DEAD/DEAH box helicase TD68_20000 PF00271 Helicase conserved C-terminal domain TD68_20005 PF03703 Bacterial PH domain TD68_20010 PF03703 Bacterial PH domain TD68_20015 PF01694 Rhomboid family TD68_20020 PF01648 4'-phosphopantetheinyl transferase superfamily TD68_20030 PF01168 Alanine racemase, N-terminal domain TD68_20030 PF00842 Alanine racemase, C-terminal domain TD68_20035 PF01402 Ribbon-helix-helix protein, copG family TD68_20040 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system TD68_20045 PF01740 STAS domain TD68_20045 PF08678 Rsbr N terminal TD68_20050 PF01740 STAS domain TD68_20055 PF13581 Histidine kinase-like ATPase domain TD68_20060 PF07228 Stage II sporulation protein E (SpoIIE) TD68_20060 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain TD68_20065 PF01740 STAS domain TD68_20070 PF13581 Histidine kinase-like ATPase domain TD68_20075 PF04545 Sigma-70, region 4 TD68_20075 PF04539 Sigma-70 region 3 TD68_20075 PF04542 Sigma-70 region 2 TD68_20080 PF07228 Stage II sporulation protein E (SpoIIE) TD68_20085 PF09371 Tex-like protein N-terminal domain TD68_20085 PF16921 Tex protein YqgF-like domain TD68_20085 PF17674 HHH domain TD68_20085 PF00575 S1 RNA binding domain TD68_20090 PF10263 SprT-like family TD68_20090 PF17283 SprT-like zinc ribbon domain TD68_20130 PF00589 Phage integrase family TD68_20130 PF14659 Phage integrase, N-terminal SAM-like domain TD68_20135 PF06114 IrrE N-terminal-like domain TD68_20140 PF01381 Helix-turn-helix TD68_20160 PF06125 Bacterial protein of unknown function (DUF961) TD68_20175 PF02486 Replication initiation factor TD68_20175 PF18106 Rolling Circle replication initiation protein N-terminal domain TD68_20205 PF12642 Conjugative transposon protein TcpC TD68_20215 PF12648 TcpE family TD68_20240 PF00877 NlpC/P60 family TD68_20250 PF14729 Domain of unknown function with cystatin-like fold (DUF4467) TD68_20260 PF18801 response regulator aspartate phosphatase H, N terminal TD68_20270 PF00487 Fatty acid desaturase TD68_20275 PF00313 'Cold-shock' DNA-binding domain TD68_20280 PF02559 CarD-like/TRCF domain TD68_20285 PF07729 FCD domain TD68_20285 PF00392 Bacterial regulatory proteins, gntR family TD68_20290 PF13536 Putative multidrug resistance efflux transporter TD68_20300 PF15652 HNH/Endo VII superfamily toxin with a SHH signature TD68_20300 PF04740 LXG domain of WXG superfamily TD68_20310 PF01047 MarR family TD68_20315 PF00583 Acetyltransferase (GNAT) family TD68_20320 PF04299 Putative FMN-binding domain TD68_20325 PF00155 Aminotransferase class I and II TD68_20325 PF00392 Bacterial regulatory proteins, gntR family TD68_20330 PF02567 Phenazine biosynthesis-like protein TD68_20335 PF07690 Major Facilitator Superfamily TD68_20340 PF00892 EamA-like transporter family TD68_20345 PF00392 Bacterial regulatory proteins, gntR family TD68_20345 PF00155 Aminotransferase class I and II TD68_20350 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 TD68_20350 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) TD68_20360 PF01022 Bacterial regulatory protein, arsR family TD68_20365 PF02040 Arsenical pump membrane protein TD68_20370 PF01451 Low molecular weight phosphotyrosine protein phosphatase TD68_20380 PF00474 Sodium:solute symporter family TD68_20390 PF01047 MarR family TD68_20395 PF03176 MMPL family TD68_20400 PF08279 HTH domain TD68_20400 PF05043 Mga helix-turn-helix domain TD68_20400 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TD68_20400 PF00874 PRD domain TD68_20405 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TD68_20405 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TD68_20405 PF02378 Phosphotransferase system, EIIC TD68_20410 PF01238 Phosphomannose isomerase type I TD68_20415 PF00892 EamA-like transporter family TD68_20420 PF00392 Bacterial regulatory proteins, gntR family TD68_20420 PF00155 Aminotransferase class I and II TD68_20425 PF12746 GNAT acetyltransferase TD68_20430 PF12706 Beta-lactamase superfamily domain TD68_20435 PF01037 Lrp/AsnC ligand binding domain TD68_20450 PF00561 alpha/beta hydrolase fold TD68_20465 PF00905 Penicillin binding protein transpeptidase domain TD68_20475 PF07690 Major Facilitator Superfamily TD68_20480 PF00465 Iron-containing alcohol dehydrogenase TD68_20485 PF01476 LysM domain TD68_20485 PF00704 Glycosyl hydrolases family 18 TD68_20490 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase