locus-tag	class	description
LIT24_00010	COG0592	DNA-directed DNA polymerase activity
LIT24_00015	COG2501	S4 domain
LIT24_00025	COG0187	DNA topoisomerase II activity
LIT24_00030	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LIT24_00065	COG0516	GMP reductase activity
LIT24_00065	COG0517	IMP dehydrogenase activity
LIT24_00070	COG1686	Belongs to the peptidase S11 family
LIT24_00100	COG1428	Deoxynucleoside kinase
LIT24_00105	COG1428	Deoxynucleoside kinase
LIT24_00110	COG1335	isochorismatase
LIT24_00115	COG0590	tRNA wobble adenosine to inosine editing
LIT24_00125	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
LIT24_00180	COG1982	Orn Lys Arg decarboxylase major
LIT24_00190	COG0470	DNA polymerase III
LIT24_00195	COG1774	PSP1 C-terminal conserved region
LIT24_00205	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
LIT24_00215	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
LIT24_00220	COG2002	toxin-antitoxin pair type II binding
LIT24_00230	COG0084	hydrolase, TatD family'
LIT24_00250	COG4466	Protein conserved in bacteria
LIT24_00265	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
LIT24_00270	COG0251	oxidation-reduction process
LIT24_00300	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
LIT24_00305	COG2002	toxin-antitoxin pair type II binding
LIT24_00310	COG2244	polysaccharide biosynthetic process
LIT24_00315	COG3956	TIGRFAM MazG family protein
LIT24_00320	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
LIT24_00340	COG1098	S1 RNA binding domain
LIT24_00355	COG2208	phosphoserine phosphatase activity
LIT24_00365	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
LIT24_00370	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
LIT24_00385	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
LIT24_00390	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
LIT24_00395	COG0512	Glutamine amidotransferase of anthranilate synthase
LIT24_00400	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
LIT24_00405	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
LIT24_00410	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
LIT24_00415	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
LIT24_00420	COG1396	sequence-specific DNA binding
LIT24_00425	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LIT24_00515	COG3880	PFAM UvrB UvrC protein
LIT24_00525	COG0542	response to heat
LIT24_00530	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
LIT24_00540	COG4956	integral membrane protein (PIN domain superfamily)
LIT24_00560	COG1045	serine acetyltransferase
LIT24_00575	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LIT24_00580	COG3688	RNA-binding protein containing a PIN domain
LIT24_00595	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
LIT24_00600	COG0250	Participates in transcription elongation, termination and antitermination
LIT24_00605	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
LIT24_00625	COG2813	Specifically methylates the guanine in position
LIT24_00640	COG1358	cellular component organization or biogenesis
LIT24_00645	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
LIT24_00710	COG0255	Belongs to the universal ribosomal protein uL29 family
LIT24_00770	COG0201	protein transport
LIT24_00780	COG0024	Methionine aminopeptidase
LIT24_00790	COG0257	Belongs to the bacterial ribosomal protein bL36 family
LIT24_00825	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LIT24_00850	COG0860	N-Acetylmuramoyl-L-alanine amidase
LIT24_00855	COG0489	protein tyrosine kinase activity
LIT24_00865	COG2194	sulfuric ester hydrolase activity
LIT24_00870	COG0726	polysaccharide deacetylase
LIT24_00950	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
LIT24_00955	COG4856	YbbR-like protein
LIT24_00995	COG1028	Short-chain dehydrogenase reductase Sdr
LIT24_01000	COG2011	ABC-type metal ion transport system permease component
LIT24_01005	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LIT24_01010	COG1464	Belongs to the NlpA lipoprotein family
LIT24_01015	COG0604	alcohol dehydrogenase
LIT24_01025	COG0277	FAD linked oxidase domain protein
LIT24_01030	COG2271	Major facilitator Superfamily
LIT24_01040	COG2814	Major facilitator Superfamily
LIT24_01055	COG2207	Transcriptional regulator
LIT24_01070	COG4166	transmembrane transport
LIT24_01075	COG4166	transmembrane transport
LIT24_01080	COG0656	L-ascorbic acid biosynthetic process
LIT24_01095	COG4149	molybdate abc transporter
LIT24_01100	COG0725	ABC transporter, periplasmic molybdate-binding protein
LIT24_01105	COG1910	domain protein
LIT24_01120	COG0697	spore germination
LIT24_01135	COG0204	Acyl-transferase
LIT24_01145	COG1609	Transcriptional regulator
LIT24_01155	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LIT24_01175	COG5298	Protein conserved in bacteria
LIT24_01200	COG0488	(ABC) transporter
LIT24_01210	COG0747	negative chemotaxis
LIT24_01215	COG0601	transmembrane transport
LIT24_01220	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LIT24_01225	COG0444	Belongs to the ABC transporter superfamily
LIT24_01230	COG4608	Belongs to the ABC transporter superfamily
LIT24_01235	COG0561	phosphatase activity
LIT24_01265	COG3185	4-Hydroxyphenylpyruvate dioxygenase
LIT24_01270	COG0179	Fumarylacetoacetate (FAA) hydrolase
LIT24_01280	COG0531	amino acid
LIT24_01285	COG2814	Major facilitator Superfamily
LIT24_01295	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
LIT24_01305	COG4294	response to UV
LIT24_01310	COG0705	Rhomboid family
LIT24_01320	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
LIT24_01325	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LIT24_01330	COG0864	Transcriptional regulator
LIT24_01335	COG2337	Toxic component of a toxin-antitoxin (TA) module
LIT24_01340	COG2183	response to ionizing radiation
LIT24_01440	COG0802	atpase or kinase
LIT24_01445	COG1214	PFAM Peptidase M22, glycoprotease
LIT24_01450	COG0456	acetyltransferase
LIT24_01460	COG0488	(ABC) transporter
LIT24_01475	COG1266	CAAX protease self-immunity
LIT24_01495	COG2252	PERMEase
LIT24_01505	COG5002	protein histidine kinase activity
LIT24_01530	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
LIT24_01570	COG2205	protein histidine kinase activity
LIT24_01575	COG0745	RESPONSE REGULATOR receiver
LIT24_01610	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LIT24_01620	COG0463	Glycosyl transferase, family 2
LIT24_01620	COG1216	Glycosyl transferase, family 2
LIT24_01640	COG0697	spore germination
LIT24_01670	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
LIT24_01675	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
LIT24_01680	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
LIT24_01690	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
LIT24_01705	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
LIT24_01715	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
LIT24_01725	COG0151	Belongs to the GarS family
LIT24_01750	COG0210	DNA helicase
LIT24_01760	COG4851	CamS sex pheromone cAM373 precursor
LIT24_01775	COG1335	isochorismatase
LIT24_01785	COG2011	ABC-type metal ion transport system permease component
LIT24_01790	COG1464	Belongs to the NlpA lipoprotein family
LIT24_01805	COG0003	Pfam Anion-transporting ATPase
LIT24_01810	COG1846	Transcriptional regulator
LIT24_01815	COG4682	membrane
LIT24_01835	COG1597	lipid kinase activity
LIT24_01850	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
LIT24_01860	COG1012	belongs to the aldehyde dehydrogenase family
LIT24_01865	COG2076	Multidrug Resistance protein
LIT24_01875	COG2309	aminopeptidase activity
LIT24_01895	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LIT24_01905	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LIT24_01910	COG4807	Protein conserved in bacteria
LIT24_01935	COG1757	Na H antiporter
LIT24_01940	COG1473	amidohydrolase
LIT24_01955	COG0450	alkyl hydroperoxide reductase
LIT24_01975	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LIT24_01980	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LIT24_01985	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LIT24_01990	COG0492	ferredoxin-NADP+ reductase activity
LIT24_02000	COG0166	Belongs to the GPI family
LIT24_02025	COG5002	protein histidine kinase activity
LIT24_02045	COG3541	Predicted nucleotidyltransferase
LIT24_02050	COG2814	Major facilitator Superfamily
LIT24_02055	COG0723	plastoquinol--plastocyanin reductase activity
LIT24_02055	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LIT24_02065	COG0765	amino acid transport
LIT24_02070	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LIT24_02080	COG0840	transmembrane signaling receptor activity
LIT24_02105	COG0549	Belongs to the carbamate kinase family
LIT24_02110	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
LIT24_02125	COG0366	Alpha amylase catalytic
LIT24_02130	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LIT24_02130	COG1263	PTS System
LIT24_02130	COG2190	(PTS) system
LIT24_02160	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
LIT24_02180	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LIT24_02190	COG1116	anion transmembrane transporter activity
LIT24_02235	COG2270	Major facilitator Superfamily
LIT24_02265	COG2310	stress, protein
LIT24_02270	COG2310	stress, protein
LIT24_02275	COG2310	stress, protein
LIT24_02280	COG0861	Integral membrane protein TerC family
LIT24_02290	COG3853	Toxic anion resistance protein (TelA)
LIT24_02305	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
LIT24_02315	COG1295	ribonuclease BN
LIT24_02320	COG2217	Heavy metal translocating P-type atpase
LIT24_02325	COG0697	spore germination
LIT24_02335	COG0681	Belongs to the peptidase S26 family
LIT24_02345	COG0586	Pfam SNARE associated Golgi protein
LIT24_02360	COG3871	stress protein (general stress protein 26)
LIT24_02365	COG0387	Pfam Sodium calcium exchanger
LIT24_02375	COG0535	radical SAM domain protein
LIT24_02395	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
LIT24_02400	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LIT24_02415	COG3829	transcription factor binding
LIT24_02425	COG0833	amino acid
LIT24_02430	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LIT24_02460	COG1263	PTS System
LIT24_02460	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LIT24_02465	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
LIT24_02480	COG0463	Glycosyl transferase, family 2
LIT24_02490	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
LIT24_02490	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LIT24_02510	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LIT24_02530	COG1228	amidohydrolase
LIT24_02535	COG1090	epimerase
LIT24_02565	COG1988	membrane-bound metal-dependent
LIT24_02570	COG1194	a g-specific adenine glycosylase
LIT24_02595	COG1132	(ABC) transporter
LIT24_02600	COG4129	membrane
LIT24_02605	COG0067	glutamate synthase
LIT24_02605	COG0070	glutamate synthase
LIT24_02605	COG0069	glutamate synthase activity
LIT24_02615	COG4555	ABC transporter
LIT24_02635	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
LIT24_02640	COG0735	belongs to the Fur family
LIT24_02760	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
LIT24_02785	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
LIT24_02790	COG1716	ATPase activity
LIT24_02790	COG5001	Diguanylate cyclase
LIT24_02795	COG2766	serine protein kinase
LIT24_02815	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
LIT24_02825	COG1585	Membrane protein implicated in regulation of membrane protease activity
LIT24_02830	COG2268	Band 7 protein
LIT24_02840	COG3290	protein histidine kinase activity
LIT24_02845	COG4565	transcriptional regulatory protein
LIT24_02850	COG2851	Citrate transporter
LIT24_02875	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
LIT24_02880	COG3842	ATPase activity
LIT24_02885	COG1175	transmembrane transport
LIT24_02890	COG0395	ABC-type sugar transport system, permease component
LIT24_02900	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
LIT24_02905	COG0745	RESPONSE REGULATOR receiver
LIT24_02910	COG5002	protein histidine kinase activity
LIT24_02920	COG4990	cell redox homeostasis
LIT24_02930	COG3290	protein histidine kinase activity
LIT24_02935	COG4565	transcriptional regulatory protein
LIT24_02940	COG3493	citrate carrier protein
LIT24_02945	COG0281	malic enzyme
LIT24_02955	COG0697	spore germination
LIT24_02960	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LIT24_02970	COG5002	protein histidine kinase activity
LIT24_02975	COG0745	RESPONSE REGULATOR receiver
LIT24_02980	COG0456	acetyltransferase
LIT24_02980	COG0454	-acetyltransferase
LIT24_02985	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
LIT24_02990	COG3383	formate dehydrogenase (NAD+) activity
LIT24_02995	COG2427	Protein of unknown function (DUF1641)
LIT24_03010	COG0531	amino acid
LIT24_03020	COG0640	Transcriptional regulator
LIT24_03025	COG2217	Heavy metal translocating P-type atpase
LIT24_03030	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
LIT24_03045	COG3227	Zinc metalloprotease (Elastase)
LIT24_03065	COG2720	vancomycin resistance protein
LIT24_03070	COG1316	TRANSCRIPTIONal
LIT24_03075	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LIT24_03080	COG0346	lactoylglutathione lyase activity
LIT24_03085	COG1253	flavin adenine dinucleotide binding
LIT24_03090	COG1027	Aspartate ammonia-lyase
LIT24_03095	COG1620	l-lactate permease
LIT24_03110	COG3104	oligopeptide transport
LIT24_03115	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LIT24_03120	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LIT24_03125	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LIT24_03135	COG2226	methyltransferase
LIT24_03145	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LIT24_03155	COG4548	von Willebrand factor, type A
LIT24_03160	COG0714	Associated with various cellular activities
LIT24_03180	COG0531	amino acid
LIT24_03185	COG2188	Transcriptional regulator
LIT24_03190	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LIT24_03190	COG1263	PTS System
LIT24_03195	COG0366	Alpha amylase catalytic
LIT24_03210	COG0697	spore germination
LIT24_03215	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
LIT24_03220	COG1115	amino acid carrier protein
LIT24_03225	COG1126	abc transporter atp-binding protein
LIT24_03230	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LIT24_03235	COG0765	amino acid transport
LIT24_03240	COG0765	amino acid transport
LIT24_03245	COG0833	amino acid
LIT24_03260	COG1595	DNA-templated transcription, initiation
LIT24_03270	COG2378	regulation of single-species biofilm formation
LIT24_03275	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
LIT24_03280	COG5002	protein histidine kinase activity
LIT24_03305	COG0659	secondary active sulfate transmembrane transporter activity
LIT24_03320	COG2271	Major facilitator Superfamily
LIT24_03325	COG1846	Transcriptional regulator
LIT24_03330	COG0477	Major facilitator Superfamily
LIT24_03335	COG1609	Transcriptional regulator
LIT24_03340	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LIT24_03355	COG1172	Belongs to the binding-protein-dependent transport system permease family
LIT24_03360	COG1879	ABC-type sugar transport system periplasmic component
LIT24_03385	COG1063	alcohol dehydrogenase
LIT24_03435	COG0840	transmembrane signaling receptor activity
LIT24_03440	COG3583	domain protein
LIT24_03440	COG3584	3D domain protein
LIT24_03445	COG1476	TRANSCRIPTIONal
LIT24_03465	COG3104	oligopeptide transport
LIT24_03470	COG1114	Component of the transport system for branched-chain amino acids
LIT24_03485	COG1113	amino acid transport
LIT24_03490	COG2252	PERMEase
LIT24_03505	COG2153	protein acetylation
LIT24_03515	COG0475	glutathione-regulated potassium exporter activity
LIT24_03515	COG0569	domain protein
LIT24_03525	COG1845	cytochrome c oxidase, subunit III
LIT24_03530	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
LIT24_03540	COG0833	amino acid
LIT24_03545	COG4990	cell redox homeostasis
LIT24_03560	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LIT24_03565	COG0697	spore germination
LIT24_03570	COG0531	amino acid
LIT24_03585	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
LIT24_03590	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
LIT24_03595	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
LIT24_03595	COG1918	ferrous iron import across plasma membrane
LIT24_03600	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
LIT24_03605	COG0573	inorganic phosphate transmembrane transporter activity
LIT24_03610	COG0581	inorganic phosphate transmembrane transporter activity
LIT24_03615	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LIT24_03735	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
LIT24_03755	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
LIT24_03760	COG1116	anion transmembrane transporter activity
LIT24_03765	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LIT24_03770	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
LIT24_03775	COG0352	thiamine-phosphate diphosphorylase activity
LIT24_03780	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LIT24_03785	COG2104	thiamine diphosphate biosynthetic process
LIT24_03795	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
LIT24_03800	COG0351	phosphomethylpyrimidine kinase
LIT24_03840	COG2205	protein histidine kinase activity
LIT24_03845	COG2814	Major facilitator Superfamily
LIT24_03850	COG1846	Transcriptional regulator
LIT24_03870	COG2252	PERMEase
LIT24_03875	COG1028	Short-chain dehydrogenase reductase Sdr
LIT24_03890	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LIT24_03895	COG1621	beta-fructofuranosidase activity
LIT24_03900	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LIT24_03900	COG1263	PTS System
LIT24_03905	COG1609	Transcriptional regulator
LIT24_03955	COG0778	Nitroreductase
LIT24_03960	COG2719	SpoVR family
LIT24_03970	COG3591	Belongs to the peptidase S1B family
LIT24_03980	COG0446	pyridine nucleotide-disulphide oxidoreductase
LIT24_03985	COG1937	Protein conserved in bacteria
LIT24_03990	COG0425	Belongs to the sulfur carrier protein TusA family
LIT24_03990	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LIT24_03995	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LIT24_03995	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LIT24_04000	COG0425	Belongs to the sulfur carrier protein TusA family
LIT24_04005	COG0425	Belongs to the sulfur carrier protein TusA family
LIT24_04005	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LIT24_04015	COG2210	Belongs to the sulfur carrier protein TusA family
LIT24_04020	COG0730	response to heat
LIT24_04030	COG1316	TRANSCRIPTIONal
LIT24_04035	COG0604	alcohol dehydrogenase
LIT24_04040	COG1283	sodium-dependent phosphate transmembrane transporter activity
LIT24_04055	COG3711	transcriptional antiterminator
LIT24_04055	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LIT24_04060	COG1447	Phosphotransferase system cellobiose-specific component IIA
LIT24_04065	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
LIT24_04090	COG3584	3D domain protein
LIT24_04090	COG1388	LysM domain
LIT24_04095	COG0577	efflux transmembrane transporter activity
LIT24_04100	COG1136	(ABC) transporter
LIT24_04110	COG5522	Integral membrane protein (intg_mem_TP0381)
LIT24_04125	COG1114	Component of the transport system for branched-chain amino acids
LIT24_04130	COG3546	catalase activity
LIT24_04165	COG0586	Pfam SNARE associated Golgi protein
LIT24_04200	COG0531	amino acid
LIT24_04205	COG0475	glutathione-regulated potassium exporter activity
LIT24_04215	COG1737	Transcriptional regulator
LIT24_04225	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LIT24_04225	COG1263	PTS System
LIT24_04235	COG2259	Doxx family
LIT24_04250	COG0697	spore germination
LIT24_04255	COG1522	sequence-specific DNA binding
LIT24_04260	COG0165	Argininosuccinate lyase
LIT24_04260	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
LIT24_04265	COG0300	oxidoreductase activity
LIT24_04285	COG1309	transcriptional regulator
LIT24_04290	COG2814	Major facilitator Superfamily
LIT24_04320	COG1136	(ABC) transporter
LIT24_04325	COG0577	efflux transmembrane transporter activity
LIT24_04330	COG1136	(ABC) transporter
LIT24_04335	COG0577	efflux transmembrane transporter activity
LIT24_04350	COG1733	regulation of RNA biosynthetic process
LIT24_04365	COG4533	DNA binding
LIT24_04370	COG2211	Major facilitator Superfamily
LIT24_04380	COG0693	protein deglycase activity
LIT24_04385	COG0753	catalase activity
LIT24_04395	COG0531	amino acid
LIT24_04400	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
LIT24_04410	COG1012	belongs to the aldehyde dehydrogenase family
LIT24_04415	COG1132	(ABC) transporter
LIT24_04420	COG1132	(ABC) transporter
LIT24_04425	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LIT24_04430	COG0765	amino acid transport
LIT24_04435	COG1126	abc transporter atp-binding protein
LIT24_04450	COG0189	ligase activity
LIT24_04480	COG0028	Belongs to the TPP enzyme family
LIT24_04485	COG3527	Alpha-acetolactate decarboxylase
LIT24_04495	COG0561	phosphatase activity
LIT24_04505	COG3409	Peptidoglycan-binding domain 1 protein
LIT24_04505	COG5632	N-Acetylmuramoyl-L-alanine amidase
LIT24_04510	COG0635	Involved in the biosynthesis of porphyrin-containing compound
LIT24_04515	COG0318	PFAM AMP-dependent synthetase and ligase
LIT24_04530	COG0659	secondary active sulfate transmembrane transporter activity
LIT24_04535	COG2244	polysaccharide biosynthetic process
LIT24_04555	COG1024	Enoyl-CoA hydratase
LIT24_04575	COG1363	Peptidase, m42
LIT24_04615	COG0601	transmembrane transport
LIT24_04620	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LIT24_04625	COG0444	Belongs to the ABC transporter superfamily
LIT24_04630	COG4608	Belongs to the ABC transporter superfamily
LIT24_04655	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LIT24_04670	COG1136	(ABC) transporter
LIT24_04670	COG0577	efflux transmembrane transporter activity
LIT24_04875	COG4585	Histidine kinase
LIT24_04880	COG2197	response regulator
LIT24_04885	COG0736	holo-[acyl-carrier-protein] synthase activity
LIT24_04890	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LIT24_04900	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
LIT24_04920	COG1113	amino acid transport
LIT24_04925	COG0778	Nitroreductase
LIT24_04935	COG2814	Major facilitator Superfamily
LIT24_04940	COG0477	Major facilitator Superfamily
LIT24_04945	COG3290	protein histidine kinase activity
LIT24_04950	COG4565	transcriptional regulatory protein
LIT24_04955	COG3181	Tripartite tricarboxylate transporter family receptor
LIT24_04960	COG0494	nUDIX hydrolase
LIT24_04975	COG0305	Participates in initiation and elongation during chromosome replication
LIT24_05010	COG0477	Major facilitator Superfamily
LIT24_05025	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LIT24_05105	COG1073	alpha beta
LIT24_05170	COG1183	phosphatidylcholine synthase activity
LIT24_05190	COG2376	Dihydroxyacetone kinase
LIT24_05200	COG2376	Dihydroxyacetone kinase
LIT24_05225	COG2373	Large extracellular alpha-helical protein
LIT24_05290	COG1191	sigma factor activity
LIT24_05300	COG2208	phosphoserine phosphatase activity
LIT24_05305	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
LIT24_05310	COG0784	Response regulator, receiver
LIT24_05310	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LIT24_05310	COG2198	Histidine kinase
LIT24_05310	COG2205	protein histidine kinase activity
LIT24_05350	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
LIT24_05370	COG0420	3'-5' exonuclease activity
LIT24_05375	COG4717	serine-type aminopeptidase activity
LIT24_05385	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
LIT24_05400	COG0346	lactoylglutathione lyase activity
LIT24_05405	COG0346	lactoylglutathione lyase activity
LIT24_05410	COG0457	Tetratricopeptide repeat
LIT24_05420	COG2267	carboxylic ester hydrolase activity
LIT24_05445	COG2140	Oxalate decarboxylase
LIT24_05450	COG3620	sequence-specific DNA binding
LIT24_05455	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
LIT24_05460	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
LIT24_05470	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
LIT24_05475	COG1695	Transcriptional regulator
LIT24_05495	COG0772	Belongs to the SEDS family
LIT24_05510	COG3973	AAA domain
LIT24_05535	COG4980	gas vesicle protein
LIT24_05540	COG0537	adenosine 5'-monophosphoramidase activity
LIT24_05545	COG1131	(ABC) transporter
LIT24_05550	COG4473	ABC transporter
LIT24_05565	COG1309	transcriptional regulator
LIT24_05575	COG3402	PFAM membrane-flanked domain
LIT24_05580	COG3428	Bacterial PH domain
LIT24_05620	COG0697	spore germination
LIT24_05625	COG3402	PFAM membrane-flanked domain
LIT24_05630	COG3428	Bacterial PH domain
LIT24_05635	COG2329	Antibiotic biosynthesis monooxygenase
LIT24_05640	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LIT24_05655	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
LIT24_05690	COG1309	transcriptional regulator
LIT24_05695	COG1511	domain protein
LIT24_05715	COG1609	Transcriptional regulator
LIT24_05725	COG1234	tRNA 3'-trailer cleavage
LIT24_05730	COG0095	Lipoate-protein ligase
LIT24_05740	COG0318	PFAM AMP-dependent synthetase and ligase
LIT24_05750	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
LIT24_05760	COG4208	sulfate ABC transporter
LIT24_05775	COG3209	COG3209 Rhs family protein
LIT24_05840	COG1408	metallophosphoesterase
LIT24_05845	COG1078	dGTPase activity
LIT24_05855	COG1595	DNA-templated transcription, initiation
LIT24_05860	COG2207	Transcriptional regulator
LIT24_05860	COG3708	Transcriptional regulator
LIT24_05870	COG2205	protein histidine kinase activity
LIT24_05875	COG0745	RESPONSE REGULATOR receiver
LIT24_05895	COG0501	Belongs to the peptidase M48B family
LIT24_05900	COG0840	transmembrane signaling receptor activity
LIT24_05905	COG3693	PFAM glycoside hydrolase, family 10
LIT24_05915	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
LIT24_05920	COG2224	Isocitrate lyase
LIT24_05935	COG1278	Cold shock
LIT24_05955	COG0398	Pfam SNARE associated Golgi protein
LIT24_06015	COG0179	Fumarylacetoacetate (FAA) hydrolase
LIT24_06040	COG0367	asparagine synthase
LIT24_06050	COG0753	catalase activity
LIT24_06055	COG0004	ammonium transporteR
LIT24_06070	COG2996	Protein conserved in bacteria
LIT24_06085	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LIT24_06100	COG0561	phosphatase activity
LIT24_06120	COG2267	carboxylic ester hydrolase activity
LIT24_06135	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LIT24_06140	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
LIT24_06145	COG5504	Zn-dependent protease
LIT24_06155	COG0180	Tryptophanyl-tRNA synthetase
LIT24_06165	COG4166	transmembrane transport
LIT24_06170	COG0601	transmembrane transport
LIT24_06175	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LIT24_06180	COG0444	Belongs to the ABC transporter superfamily
LIT24_06185	COG4608	Belongs to the ABC transporter superfamily
LIT24_06190	COG0534	Mate efflux family protein
LIT24_06195	COG4166	transmembrane transport
LIT24_06210	COG0861	Integral membrane protein TerC family
LIT24_06230	COG1164	Oligoendopeptidase f
LIT24_06245	COG2346	COG2346, Truncated hemoglobins
LIT24_06250	COG4116	CYTH
LIT24_06260	COG2357	RelA SpoT domain protein
LIT24_06270	COG0564	pseudouridine synthase activity
LIT24_06285	COG0772	Belongs to the SEDS family
LIT24_06290	COG1216	Glycosyl transferase, family 2
LIT24_06310	COG0457	Tetratricopeptide repeat
LIT24_06310	COG0463	Glycosyl transferase, family 2
LIT24_06330	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
LIT24_06345	COG1091	dTDP-4-dehydrorhamnose reductase activity
LIT24_06390	COG2153	protein acetylation
LIT24_06400	COG2382	esterase
LIT24_06425	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LIT24_06435	COG0512	Glutamine amidotransferase of anthranilate synthase
LIT24_06435	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
LIT24_06470	COG1620	l-lactate permease
LIT24_06475	COG5634	Uncharacterized conserved protein (DUF2278)
LIT24_06515	COG2226	methyltransferase
LIT24_06535	COG0508	dehydrogenase complex catalyzes the overall conversion of
LIT24_06545	COG1476	TRANSCRIPTIONal
LIT24_06580	COG4152	abc transporter atp-binding protein
LIT24_06585	COG1668	transmembrane transport
LIT24_06610	COG1686	Belongs to the peptidase S11 family
LIT24_06615	COG0681	Belongs to the peptidase S26 family
LIT24_06650	COG1012	belongs to the aldehyde dehydrogenase family
LIT24_06660	COG1176	ABC-type spermidine putrescine transport system, permease component I
LIT24_06665	COG1177	transmembrane transport
LIT24_06680	COG2409	Drug exporters of the RND superfamily
LIT24_06690	COG0564	pseudouridine synthase activity
LIT24_06700	COG2340	Cysteine-rich secretory protein family
LIT24_06705	COG0247	lactate metabolic process
LIT24_06710	COG0277	FAD linked oxidase domain protein
LIT24_06715	COG3835	regulator
LIT24_06725	COG0745	RESPONSE REGULATOR receiver
LIT24_06730	COG5002	protein histidine kinase activity
LIT24_06735	COG2186	Transcriptional regulator
LIT24_06755	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
LIT24_06765	COG2116	formate transmembrane transporter activity
LIT24_06770	COG0861	Integral membrane protein TerC family
LIT24_06775	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
LIT24_06785	COG2030	dehydratase
LIT24_06805	COG1028	Short-chain dehydrogenase reductase Sdr
LIT24_06810	COG3243	poly(R)-hydroxyalkanoic acid synthase
LIT24_06820	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
LIT24_06835	COG1840	ABC-type Fe3 transport system, periplasmic component
LIT24_06840	COG3842	ATPase activity
LIT24_06865	COG1349	DNA-binding transcription factor activity
LIT24_06875	COG0235	Class ii aldolase
LIT24_06885	COG2861	carbohydrate metabolic process
LIT24_06895	COG3852	Histidine kinase
LIT24_06900	COG1846	Transcriptional regulator
LIT24_06910	COG2318	DinB family
LIT24_06920	COG5002	protein histidine kinase activity
LIT24_06930	COG0720	synthase
LIT24_06945	COG4873	Protein conserved in bacteria
LIT24_06975	COG1780	Probably involved in ribonucleotide reductase function
LIT24_06980	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LIT24_06995	COG1725	Transcriptional regulator
LIT24_07000	COG1131	(ABC) transporter
LIT24_07010	COG1131	(ABC) transporter
LIT24_07020	COG1266	CAAX protease self-immunity
LIT24_07030	COG1522	sequence-specific DNA binding
LIT24_07040	COG1335	isochorismatase
LIT24_07050	COG1619	proteins homologs of microcin C7 resistance protein MccF
LIT24_07055	COG2070	2-Nitropropane dioxygenase
LIT24_07060	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
LIT24_07070	COG1696	Membrane protein involved in D-alanine export
LIT24_07095	COG0716	FMN binding
LIT24_07145	COG1846	Transcriptional regulator
LIT24_07155	COG1301	dicarboxylic acid transport
LIT24_07160	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
LIT24_07165	COG4709	membrane
LIT24_07170	COG3874	Sporulation protein YtfJ
LIT24_07195	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
LIT24_07200	COG0028	Belongs to the TPP enzyme family
LIT24_07205	COG0440	acetolactate synthase activity
LIT24_07280	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
LIT24_07295	COG1183	phosphatidylcholine synthase activity
LIT24_07300	COG1368	sulfuric ester hydrolase activity
LIT24_07310	COG0019	diaminopimelate decarboxylase activity
LIT24_07330	COG0529	Catalyzes the synthesis of activated sulfate
LIT24_07335	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LIT24_07355	COG1648	precorrin-2 dehydrogenase activity
LIT24_07360	COG0733	neurotransmitter:sodium symporter activity
LIT24_07385	COG1757	Na H antiporter
LIT24_07400	COG4758	membrane
LIT24_07405	COG4585	Histidine kinase
LIT24_07410	COG2197	response regulator
LIT24_07420	COG1114	Component of the transport system for branched-chain amino acids
LIT24_07470	COG0730	response to heat
LIT24_07475	COG0306	phosphate transporter
LIT24_07480	COG1392	Phosphate transport regulator
LIT24_07485	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LIT24_07500	COG3852	Histidine kinase
LIT24_07505	COG1801	Protein of unknown function DUF72
LIT24_07515	COG0582	viral genome integration into host DNA
LIT24_07520	COG5002	protein histidine kinase activity
LIT24_07535	COG0392	lysyltransferase activity
LIT24_07535	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
LIT24_07550	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
LIT24_07555	COG1686	Belongs to the peptidase S11 family
LIT24_07560	COG2715	membrane protein required for spore maturation
LIT24_07565	COG0700	Nucleoside recognition
LIT24_07570	COG1187	pseudouridine synthase activity
LIT24_07580	COG1333	cytochrome c biogenesis protein
LIT24_07585	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
LIT24_07590	COG0745	RESPONSE REGULATOR receiver
LIT24_07595	COG5002	protein histidine kinase activity
LIT24_07600	COG2096	Adenosyltransferase
LIT24_07615	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
LIT24_07620	COG1141	Ferredoxin
LIT24_07630	COG0514	ATP-dependent DNA helicase (RecQ)
LIT24_07635	COG1266	CAAX protease self-immunity
LIT24_07645	COG1408	metallophosphoesterase
LIT24_07650	COG0789	Transcriptional regulator
LIT24_07660	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
LIT24_07680	COG0492	ferredoxin-NADP+ reductase activity
LIT24_07685	COG0252	asparaginase activity
LIT24_07765	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
LIT24_07780	COG0142	geranyltranstransferase activity
LIT24_07790	COG0142	geranyltranstransferase activity
LIT24_07815	COG0457	Tetratricopeptide repeat
LIT24_07835	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
LIT24_07840	COG2010	Cytochrome c
LIT24_07840	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
LIT24_07845	COG4347	Protein of unknown function (DUF1405)
LIT24_07860	COG2738	Putative neutral zinc metallopeptidase
LIT24_07870	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LIT24_07875	COG1694	Mazg nucleotide pyrophosphohydrolase
LIT24_07895	COG0438	transferase activity, transferring glycosyl groups
LIT24_07930	COG1199	ATP-dependent helicase activity
LIT24_07930	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
LIT24_07950	COG3935	DnaD domain protein
LIT24_07955	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
LIT24_07965	COG4499	WXG100 protein secretion system (Wss), protein YukC
LIT24_07965	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LIT24_08020	COG0116	Belongs to the methyltransferase superfamily
LIT24_08030	COG1199	ATP-dependent helicase activity
LIT24_08035	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
LIT24_08045	COG0024	Methionine aminopeptidase
LIT24_08055	COG2233	PERMEase
LIT24_08060	COG2311	Membrane
LIT24_08065	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
LIT24_08075	COG0456	acetyltransferase
LIT24_08125	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LIT24_08140	COG3944	biosynthesis protein
LIT24_08150	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
LIT24_08165	COG1215	transferase activity, transferring glycosyl groups
LIT24_08170	COG0438	transferase activity, transferring glycosyl groups
LIT24_08185	COG0454	-acetyltransferase
LIT24_08205	COG0328	RNA-DNA hybrid ribonuclease activity
LIT24_08240	COG3403	YqcI/YcgG family
LIT24_08245	COG1280	lysine exporter protein (LysE YggA)
LIT24_08265	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LIT24_08270	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
LIT24_08280	COG0475	glutathione-regulated potassium exporter activity
LIT24_08285	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LIT24_08290	COG0789	Transcriptional regulator
LIT24_08290	COG4978	Transcriptional regulator
LIT24_08300	COG2323	membrane
LIT24_08305	COG1434	Gram-negative-bacterium-type cell wall biogenesis
LIT24_08340	COG1923	regulation of RNA biosynthetic process
LIT24_08350	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
LIT24_08355	COG1360	Flagellar Motor Protein
LIT24_08360	COG2201	protein-glutamate methylesterase activity
LIT24_08365	COG0643	Histidine kinase
LIT24_08365	COG2198	Histidine kinase
LIT24_08370	COG1776	CheC inhibitor of MCP methylation
LIT24_08370	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
LIT24_08385	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
LIT24_08405	COG1256	bacterial-type flagellum assembly
LIT24_08410	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
LIT24_08430	COG1815	bacterial-type flagellum-dependent cell motility
LIT24_08435	COG1558	bacterial-type flagellum-dependent cell motility
LIT24_08445	COG1766	The M ring may be actively involved in energy transduction
LIT24_08450	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
LIT24_08460	COG1157	protein secretion by the type III secretion system
LIT24_08480	COG1749	Flagellar hook protein flgE
LIT24_08495	COG0784	Response regulator, receiver
LIT24_08495	COG0835	chemotaxis
LIT24_08505	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
LIT24_08510	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
LIT24_08515	COG0741	lytic transglycosylase activity
LIT24_08525	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
LIT24_08530	COG1776	CheC inhibitor of MCP methylation
LIT24_08530	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
LIT24_08540	COG1338	Plays a role in the flagellum-specific transport system
LIT24_08545	COG1987	bacterial-type flagellum assembly
LIT24_08555	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
LIT24_08560	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
LIT24_08565	COG1419	protein localization to endoplasmic reticulum
LIT24_08570	COG4786	Flagellar basal body rod
LIT24_08575	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
LIT24_08610	COG2329	Antibiotic biosynthesis monooxygenase
LIT24_08635	COG0583	DNA-binding transcription factor activity
LIT24_08685	COG0406	alpha-ribazole phosphatase activity
LIT24_08715	COG0367	asparagine synthase
LIT24_08745	COG1802	Transcriptional regulator
LIT24_08750	COG0697	spore germination
LIT24_08760	COG0523	cobalamin synthesis protein
LIT24_08765	COG0701	Predicted permease
LIT24_08780	COG1757	Na H antiporter
LIT24_08785	COG0789	Transcriptional regulator
LIT24_08815	COG0534	Mate efflux family protein
LIT24_08820	COG3340	Belongs to the peptidase S51 family
LIT24_08845	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LIT24_08865	COG2733	membrane
LIT24_08900	COG1131	(ABC) transporter
LIT24_08920	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LIT24_08925	COG0528	UMP kinase activity
LIT24_08935	COG1027	Aspartate ammonia-lyase
LIT24_08940	COG0281	malic enzyme
LIT24_08945	COG4191	Histidine kinase
LIT24_08950	COG0784	Response regulator, receiver
LIT24_08955	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
LIT24_09000	COG2814	Major facilitator Superfamily
LIT24_09015	COG1695	Transcriptional regulator
LIT24_09025	COG0477	Major facilitator Superfamily
LIT24_09035	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LIT24_09040	COG2223	nitrite transmembrane transporter activity
LIT24_09045	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
LIT24_09065	COG0733	neurotransmitter:sodium symporter activity
LIT24_09075	COG5566	PFAM Mor transcription activator
LIT24_09080	COG2323	membrane
LIT24_09100	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LIT24_09110	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
LIT24_09115	COG0028	Belongs to the TPP enzyme family
LIT24_09135	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
LIT24_09160	COG2814	Major facilitator Superfamily
LIT24_09165	COG3384	dioxygenase
LIT24_09175	COG3279	Response regulator of the LytR AlgR family
LIT24_09180	COG0427	acetyl-CoA hydrolase
LIT24_09200	COG4166	transmembrane transport
LIT24_09205	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LIT24_09210	COG0745	RESPONSE REGULATOR receiver
LIT24_09225	COG1914	H( )-stimulated, divalent metal cation uptake system
LIT24_09240	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
LIT24_09245	COG0531	amino acid
LIT24_09280	COG1309	transcriptional regulator
LIT24_09290	COG2390	Transcriptional regulator
LIT24_09300	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LIT24_09305	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
LIT24_09320	COG4846	Membrane protein involved in cytochrome C biogenesis
LIT24_09330	COG0006	proline dipeptidase activity
LIT24_09340	COG2132	Multicopper oxidase
LIT24_09350	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LIT24_09370	COG1114	Component of the transport system for branched-chain amino acids
LIT24_09380	COG1276	copper resistance
LIT24_09380	COG2372	response to copper ion
LIT24_09385	COG4549	nuclear export factor GLE1
LIT24_09390	COG0697	spore germination
LIT24_09395	COG0583	DNA-binding transcription factor activity
LIT24_09400	COG1959	2 iron, 2 sulfur cluster binding
LIT24_09405	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
LIT24_09410	COG0778	Nitroreductase
LIT24_09420	COG0628	permease
LIT24_09430	COG1231	oxidoreductase activity
LIT24_09435	COG0523	cobalamin synthesis protein
LIT24_09445	COG0411	ABC transporter
LIT24_09465	COG0583	DNA-binding transcription factor activity
LIT24_09475	COG1942	4-Oxalocrotonate Tautomerase
LIT24_09495	COG1271	oxidase subunit
LIT24_09500	COG1294	oxidase, subunit
LIT24_09505	COG4988	ABC transporter
LIT24_09510	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
LIT24_09520	COG1216	Glycosyl transferase, family 2
LIT24_09560	COG1686	Belongs to the peptidase S11 family
LIT24_09575	COG0791	NLP P60 protein
LIT24_09575	COG1388	LysM domain
LIT24_09585	COG1132	(ABC) transporter
LIT24_09590	COG0745	RESPONSE REGULATOR receiver
LIT24_09595	COG5002	protein histidine kinase activity
LIT24_09600	COG0300	oxidoreductase activity
LIT24_09630	COG0460	homoserine dehydrogenase
LIT24_09655	COG1316	TRANSCRIPTIONal
LIT24_09665	COG0745	RESPONSE REGULATOR receiver
LIT24_09670	COG5002	protein histidine kinase activity
LIT24_09685	COG1285	pathogenesis
LIT24_09690	COG1247	-acetyltransferase
LIT24_09710	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LIT24_09720	COG1082	Xylose isomerase domain protein TIM barrel
LIT24_09730	COG2814	Major facilitator Superfamily
LIT24_09735	COG1279	arginine transmembrane transporter activity
LIT24_09740	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LIT24_09750	COG1752	Esterase of the alpha-beta hydrolase superfamily
LIT24_09785	COG0577	efflux transmembrane transporter activity
LIT24_09790	COG2002	toxin-antitoxin pair type II binding
LIT24_09795	COG1404	Belongs to the peptidase S8 family
LIT24_09825	COG0840	transmembrane signaling receptor activity
LIT24_09840	COG3949	Membrane
LIT24_09845	COG0783	Belongs to the Dps family
LIT24_09860	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LIT24_09870	COG1231	oxidoreductase activity
LIT24_09875	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LIT24_09880	COG4989	oxidoreductase activity
LIT24_09885	COG0523	cobalamin synthesis protein
LIT24_09890	COG0456	acetyltransferase
LIT24_09895	COG0803	Belongs to the bacterial solute-binding protein 9 family
LIT24_09905	COG0702	epimerase
LIT24_09915	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
LIT24_09925	COG4166	transmembrane transport
LIT24_09950	COG5337	Spore coat protein CotH
LIT24_09955	COG1051	belongs to the nudix hydrolase family
LIT24_09960	COG0586	Pfam SNARE associated Golgi protein
LIT24_09965	COG2244	polysaccharide biosynthetic process
LIT24_09975	COG0701	Predicted permease
LIT24_09980	COG3689	TIGRFAM TIGR03943 family protein
LIT24_09985	COG1607	acyl-coa hydrolase
LIT24_09995	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LIT24_10010	COG0702	epimerase
LIT24_10015	COG2839	Protein conserved in bacteria
LIT24_10020	COG1253	flavin adenine dinucleotide binding
LIT24_10035	COG1114	Component of the transport system for branched-chain amino acids
LIT24_10040	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LIT24_10060	COG0860	N-Acetylmuramoyl-L-alanine amidase
LIT24_10070	COG1876	peptidase activity
LIT24_10085	COG2211	Major facilitator Superfamily
LIT24_10100	COG0860	N-Acetylmuramoyl-L-alanine amidase
LIT24_10110	COG0561	phosphatase activity
LIT24_10125	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LIT24_10145	COG1819	glycosyl
LIT24_10150	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LIT24_10155	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LIT24_10185	COG0456	acetyltransferase
LIT24_10220	COG4499	WXG100 protein secretion system (Wss), protein YukC
LIT24_10310	COG3874	Sporulation protein YtfJ
LIT24_10335	COG2226	methyltransferase
LIT24_10355	COG1082	Xylose isomerase domain protein TIM barrel
LIT24_10360	COG0346	lactoylglutathione lyase activity
LIT24_10370	COG0604	alcohol dehydrogenase
LIT24_10375	COG1595	DNA-templated transcription, initiation
LIT24_10400	COG0386	Belongs to the glutathione peroxidase family
LIT24_10405	COG1305	Transglutaminase-like
LIT24_10410	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
LIT24_10415	COG0714	Associated with various cellular activities
LIT24_10430	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
LIT24_10435	COG1140	nitrate reductase beta subunit
LIT24_10440	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
LIT24_10445	COG2181	nitrate reductase activity
LIT24_10450	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
LIT24_10455	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
LIT24_10460	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
LIT24_10465	COG0303	'Molybdopterin
LIT24_10470	COG0314	molybdopterin synthase activity
LIT24_10480	COG2223	nitrite transmembrane transporter activity
LIT24_10500	COG1648	precorrin-2 dehydrogenase activity
LIT24_10510	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
LIT24_10510	COG1587	Uroporphyrinogen-III synthase
LIT24_10515	COG2146	nitrite reductase [NAD(P)H] activity
LIT24_10520	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LIT24_10525	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
LIT24_10560	COG2359	stage V sporulation protein S
LIT24_10575	COG0457	Tetratricopeptide repeat
LIT24_10590	COG1418	mRNA catabolic process
LIT24_10595	COG0488	(ABC) transporter
LIT24_10610	COG0629	single-stranded DNA binding
LIT24_10620	COG1413	lyase activity
LIT24_10635	COG2521	methyltransferase
LIT24_10635	COG2136	Putative SAM-dependent methyltransferase
LIT24_10640	COG0018	arginyl-trna synthetase
LIT24_10690	COG0017	Asparaginyl-tRNA synthetase
LIT24_10695	COG0733	neurotransmitter:sodium symporter activity
LIT24_10720	COG2610	gluconate transmembrane transporter activity
LIT24_10730	COG1794	racemase activity, acting on amino acids and derivatives
LIT24_10740	COG0456	acetyltransferase
LIT24_10750	COG3655	Transcriptional regulator
LIT24_10755	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
LIT24_10765	COG1131	(ABC) transporter
LIT24_10770	COG4473	ABC transporter
LIT24_10780	COG0546	phosphoglycolate phosphatase activity
LIT24_10795	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
LIT24_10810	COG0768	penicillin binding
LIT24_10820	COG0204	Acyl-transferase
LIT24_10825	COG1272	protein, Hemolysin III
LIT24_10835	COG0805	protein transport
LIT24_10845	COG1307	EDD domain protein, DegV family
LIT24_10855	COG1999	signal sequence binding
LIT24_10860	COG0071	Belongs to the small heat shock protein (HSP20) family
LIT24_10865	COG0367	asparagine synthase
LIT24_10880	COG0860	N-Acetylmuramoyl-L-alanine amidase
LIT24_10885	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LIT24_10890	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
LIT24_10910	COG1335	isochorismatase
LIT24_10920	COG0668	transmembrane transport
LIT24_10925	COG4585	Histidine kinase
LIT24_10925	COG2203	Gaf domain
LIT24_10930	COG2197	response regulator
LIT24_10935	COG1737	Transcriptional regulator
LIT24_10940	COG0384	phenazine biosynthesis protein PhzF
LIT24_10945	COG1064	alcohol dehydrogenase
LIT24_10960	COG1070	Carbohydrate kinase
LIT24_10970	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
LIT24_11005	COG0517	IMP dehydrogenase activity
LIT24_11005	COG1125	glycine betaine transport
LIT24_11010	COG1174	glycine betaine transport
LIT24_11045	COG1253	flavin adenine dinucleotide binding
LIT24_11050	COG1012	belongs to the aldehyde dehydrogenase family
LIT24_11055	COG5506	Protein of unknown function (DUF1694)
LIT24_11070	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
LIT24_11075	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
LIT24_11080	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
LIT24_11085	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LIT24_11090	COG0456	acetyltransferase
LIT24_11095	COG3829	transcription factor binding
LIT24_11100	COG1509	lysine 2,3-aminomutase activity
LIT24_11135	COG0515	serine threonine protein kinase
LIT24_11135	COG3064	Membrane
LIT24_11135	COG4991	sh3 domain protein
LIT24_11145	COG0671	phosphoesterase, PA-phosphatase related
LIT24_11150	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
LIT24_11155	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LIT24_11220	COG0300	oxidoreductase activity
LIT24_11240	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LIT24_11240	COG4499	WXG100 protein secretion system (Wss), protein YukC
LIT24_11250	COG2814	Major facilitator Superfamily
LIT24_11260	COG0372	Belongs to the citrate synthase family
LIT24_11265	COG2079	MmgE PrpD family protein
LIT24_11270	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
LIT24_11275	COG1960	acyl-CoA dehydrogenase activity
LIT24_11280	COG2084	Dehydrogenase
LIT24_11290	COG1280	lysine exporter protein (LysE YggA)
LIT24_11295	COG1024	Enoyl-CoA hydratase
LIT24_11310	COG0420	3'-5' exonuclease activity
LIT24_11315	COG0419	ATPase involved in DNA repair
LIT24_11335	COG2223	nitrite transmembrane transporter activity
LIT24_11340	COG1028	Short-chain dehydrogenase reductase Sdr
LIT24_11345	COG1169	isochorismate synthase
LIT24_11350	COG1021	2,3-dihydroxybenzoate-AMP ligase
LIT24_11355	COG1535	isochorismatase
LIT24_11355	COG3433	isochorismatase activity
LIT24_11360	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LIT24_11365	COG3251	PFAM MbtH domain protein
LIT24_11370	COG2814	Major facilitator Superfamily
LIT24_11385	COG0776	regulation of translation
LIT24_11395	COG2318	DinB family
LIT24_11405	COG1115	amino acid carrier protein
LIT24_11430	COG1187	pseudouridine synthase activity
LIT24_11435	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
LIT24_11440	COG1136	(ABC) transporter
LIT24_11465	COG0028	Belongs to the TPP enzyme family
LIT24_11505	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
LIT24_11560	COG1247	-acetyltransferase
LIT24_11585	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
LIT24_11595	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LIT24_11625	COG0583	DNA-binding transcription factor activity
LIT24_11630	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
LIT24_11645	COG0583	DNA-binding transcription factor activity
LIT24_11650	COG2258	MOSC domain
LIT24_11665	COG1132	(ABC) transporter
LIT24_11670	COG1132	(ABC) transporter
LIT24_11720	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LIT24_11725	COG1595	DNA-templated transcription, initiation
LIT24_11750	COG1649	PFAM Uncharacterised BCR, COG1649
LIT24_11775	COG2971	BadF BadG BcrA BcrD
LIT24_11795	COG1846	Transcriptional regulator
LIT24_11810	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LIT24_11825	COG1309	transcriptional regulator
LIT24_11865	COG2323	membrane
LIT24_11915	COG0500	methyltransferase
LIT24_11915	COG3615	Tellurite resistance protein tehB
LIT24_11930	COG3961	Belongs to the TPP enzyme family
LIT24_11935	COG1846	Transcriptional regulator
LIT24_11965	COG2195	Cleaves the N-terminal amino acid of tripeptides
LIT24_11990	COG2002	toxin-antitoxin pair type II binding
LIT24_12000	COG0730	response to heat
LIT24_12005	COG0110	maltose O-acetyltransferase activity
LIT24_12010	COG1686	Belongs to the peptidase S11 family
LIT24_12025	COG2814	Major facilitator Superfamily
LIT24_12060	COG2312	Erythromycin esterase
LIT24_12070	COG0741	lytic transglycosylase activity
LIT24_12075	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LIT24_12115	COG1760	l-serine dehydratase
LIT24_12120	COG1760	l-serine dehydratase
LIT24_12125	COG0814	amino acid
LIT24_12145	COG1533	DNA photolyase activity
LIT24_12165	COG0772	Belongs to the SEDS family
LIT24_12170	COG2239	Acts as a magnesium transporter
LIT24_12185	COG1595	DNA-templated transcription, initiation
LIT24_12195	COG0768	penicillin binding
LIT24_12200	COG0768	penicillin binding
LIT24_12210	COG1408	metallophosphoesterase
LIT24_12220	COG1131	(ABC) transporter
LIT24_12230	COG1309	transcriptional regulator
LIT24_12245	COG1960	acyl-CoA dehydrogenase activity
LIT24_12250	COG0439	Biotin carboxylase
LIT24_12255	COG0511	ligase activity, forming carbon-carbon bonds
LIT24_12260	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
LIT24_12265	COG1024	Enoyl-CoA hydratase
LIT24_12270	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
LIT24_12275	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
LIT24_12295	COG0572	uridine kinase
LIT24_12315	COG1686	Belongs to the peptidase S11 family
LIT24_12340	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
LIT24_12355	COG3227	Zinc metalloprotease (Elastase)
LIT24_12360	COG2207	Transcriptional regulator
LIT24_12390	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
LIT24_12415	COG2814	Major facilitator Superfamily
LIT24_12425	COG1733	regulation of RNA biosynthetic process
LIT24_12475	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LIT24_12490	COG0693	protein deglycase activity
LIT24_12515	COG2323	membrane
LIT24_12520	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
LIT24_12530	COG3386	PFAM SMP-30 Gluconolaconase
LIT24_12540	COG1384	Belongs to the class-I aminoacyl-tRNA synthetase family
LIT24_12545	COG3773	Cell wall hydrolase
LIT24_12555	COG0745	RESPONSE REGULATOR receiver
LIT24_12560	COG2205	protein histidine kinase activity
LIT24_12565	COG0488	(ABC) transporter
LIT24_12575	COG1136	(ABC) transporter
LIT24_12580	COG0577	efflux transmembrane transporter activity
LIT24_12600	COG0460	homoserine dehydrogenase
LIT24_12605	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LIT24_12615	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
LIT24_12685	COG2124	cytochrome p450
LIT24_12720	COG0561	phosphatase activity
LIT24_12725	COG5002	protein histidine kinase activity
LIT24_12730	COG0768	penicillin binding
LIT24_12740	COG1819	glycosyl
LIT24_12745	COG1794	racemase activity, acting on amino acids and derivatives
LIT24_12770	COG2205	protein histidine kinase activity
LIT24_12830	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
LIT24_12840	COG0745	RESPONSE REGULATOR receiver
LIT24_12845	COG5002	protein histidine kinase activity
LIT24_12850	COG0604	alcohol dehydrogenase
LIT24_12855	COG0671	phosphoesterase, PA-phosphatase related
LIT24_12860	COG0768	penicillin binding
LIT24_12915	COG2814	Major facilitator Superfamily
LIT24_12930	COG0584	glycerophosphoryl diester phosphodiesterase
LIT24_12950	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LIT24_12955	COG0697	spore germination
LIT24_12990	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
LIT24_13000	COG2223	nitrite transmembrane transporter activity
LIT24_13015	COG0592	DNA-directed DNA polymerase activity
LIT24_13050	COG3878	Protein conserved in bacteria
LIT24_13075	COG4667	esterase of the alpha-beta hydrolase superfamily
LIT24_13115	COG0322	excinuclease ABC activity
LIT24_13155	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LIT24_13175	COG1011	Hydrolase
LIT24_13180	COG0745	RESPONSE REGULATOR receiver
LIT24_13185	COG5002	protein histidine kinase activity
LIT24_13200	COG1136	(ABC) transporter
LIT24_13205	COG0577	efflux transmembrane transporter activity
LIT24_13210	COG1073	alpha beta
LIT24_13215	COG0657	acetylesterase activity
LIT24_13220	COG0076	glutamate decarboxylase activity
LIT24_13235	COG1523	belongs to the glycosyl hydrolase 13 family
LIT24_13240	COG3227	Zinc metalloprotease (Elastase)
LIT24_13245	COG0737	Belongs to the 5'-nucleotidase family
LIT24_13260	COG0201	protein transport
LIT24_13265	COG0697	spore germination
LIT24_13270	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LIT24_13305	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LIT24_13320	COG2959	enzyme of heme biosynthesis
LIT24_13360	COG1309	transcriptional regulator
LIT24_13390	COG3284	Transcriptional regulator
LIT24_13405	COG1349	DNA-binding transcription factor activity
LIT24_13420	COG1959	2 iron, 2 sulfur cluster binding
LIT24_13435	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LIT24_13440	COG0508	dehydrogenase complex catalyzes the overall conversion of
LIT24_13445	COG0022	dehydrogenase e1 component
LIT24_13450	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
LIT24_13460	COG1028	Short-chain dehydrogenase reductase Sdr
LIT24_13465	COG0456	acetyltransferase
LIT24_13465	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
LIT24_13470	COG2816	NAD+ diphosphatase activity
LIT24_13500	COG4176	ABC-type proline glycine betaine transport system permease component
LIT24_13505	COG0517	IMP dehydrogenase activity
LIT24_13505	COG4175	Glycine betaine
LIT24_13535	COG2153	protein acetylation
LIT24_13540	COG3397	chitin binding
LIT24_13545	COG1819	glycosyl
LIT24_13565	COG2205	protein histidine kinase activity
LIT24_13570	COG2226	methyltransferase
LIT24_13575	COG2315	Protein conserved in bacteria
LIT24_13620	COG0456	acetyltransferase
LIT24_13625	COG3973	AAA domain
LIT24_13640	COG0514	ATP-dependent DNA helicase (RecQ)
LIT24_13675	COG4637	Psort location Cytoplasmic, score
LIT24_13690	COG3397	chitin binding
LIT24_13705	COG1162	GTPase activity
LIT24_13710	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
LIT24_13720	COG1012	belongs to the aldehyde dehydrogenase family
LIT24_13725	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LIT24_13735	COG3938	Belongs to the proline racemase family
LIT24_13740	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LIT24_13790	COG1078	dGTPase activity
LIT24_13795	COG0586	Pfam SNARE associated Golgi protein
LIT24_13805	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
LIT24_13815	COG4166	transmembrane transport
LIT24_13825	COG4948	Mandelate Racemase Muconate Lactonizing
LIT24_13840	COG0667	Aldo Keto reductase
LIT24_13885	COG5002	protein histidine kinase activity
LIT24_13885	COG3850	Histidine kinase
LIT24_13890	COG0745	RESPONSE REGULATOR receiver
LIT24_13930	COG1164	Oligoendopeptidase f
LIT24_13935	COG1307	EDD domain protein, DegV family
LIT24_13975	COG2814	Major facilitator Superfamily
LIT24_13985	COG1664	Polymer-forming cytoskeletal
LIT24_13990	COG0789	Transcriptional regulator
LIT24_13995	COG4533	DNA binding
LIT24_14000	COG2814	Major facilitator Superfamily
LIT24_14000	COG0477	Major facilitator Superfamily
LIT24_14025	COG2261	transglycosylase associated protein
LIT24_14040	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
LIT24_14075	COG0436	Aminotransferase
LIT24_14080	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
LIT24_14090	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
LIT24_14130	COG0628	permease
LIT24_14145	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LIT24_14150	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LIT24_14155	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
LIT24_14185	COG2746	aminoglycoside 3-N-acetyltransferase activity
LIT24_14205	COG0697	spore germination
LIT24_14210	COG2318	DinB family
LIT24_14230	COG4912	Dna alkylation repair
LIT24_14240	COG0346	lactoylglutathione lyase activity
LIT24_14255	COG0861	Integral membrane protein TerC family
LIT24_14260	COG1368	sulfuric ester hydrolase activity
LIT24_14265	COG0488	(ABC) transporter
LIT24_14270	COG1033	growth of symbiont in host cell
LIT24_14270	COG2409	Drug exporters of the RND superfamily
LIT24_14275	COG1309	transcriptional regulator
LIT24_14290	COG0287	Prephenate dehydrogenase
LIT24_14305	COG1605	Chorismate mutase
LIT24_14305	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
LIT24_14345	COG1388	LysM domain
LIT24_14345	COG3584	3D domain protein
LIT24_14355	COG0346	lactoylglutathione lyase activity
LIT24_14385	COG1879	ABC-type sugar transport system periplasmic component
LIT24_14390	COG1172	Belongs to the binding-protein-dependent transport system permease family
LIT24_14395	COG1172	Belongs to the binding-protein-dependent transport system permease family
LIT24_14405	COG2390	Transcriptional regulator
LIT24_14410	COG1070	Carbohydrate kinase
LIT24_14430	COG2329	Antibiotic biosynthesis monooxygenase
LIT24_14450	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LIT24_14465	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LIT24_14470	COG4187	Peptidase family M20/M25/M40
LIT24_14475	COG1414	Transcriptional regulator
LIT24_14480	COG0833	amino acid
LIT24_14490	COG3239	Fatty acid desaturase
LIT24_14500	COG2720	vancomycin resistance protein
LIT24_14505	COG1785	Belongs to the alkaline phosphatase family
LIT24_14515	COG3655	Transcriptional regulator
LIT24_14540	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LIT24_14545	COG0346	lactoylglutathione lyase activity
LIT24_14570	COG0714	Associated with various cellular activities
LIT24_14595	COG0463	Glycosyl transferase, family 2
LIT24_14625	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
LIT24_14630	COG0753	catalase activity
LIT24_14670	COG0714	Associated with various cellular activities
LIT24_14710	COG0778	Nitroreductase
LIT24_14715	COG1846	Transcriptional regulator
LIT24_14730	COG1051	belongs to the nudix hydrolase family
LIT24_14735	COG3831	ATPase activity
LIT24_14735	COG4884	unkown
LIT24_14750	COG1136	(ABC) transporter
LIT24_14750	COG0577	efflux transmembrane transporter activity
LIT24_14780	COG0590	tRNA wobble adenosine to inosine editing
LIT24_14780	COG0037	tRNA processing
LIT24_14785	COG0456	acetyltransferase
LIT24_14800	COG0697	spore germination
LIT24_14805	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LIT24_14850	COG0730	response to heat
LIT24_14860	COG0833	amino acid
LIT24_14870	COG4335	DNA alkylation repair
LIT24_14905	COG0768	penicillin binding
LIT24_14940	COG1984	allophanate hydrolase subunit 2
LIT24_14945	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
LIT24_14950	COG1414	Transcriptional regulator
LIT24_14960	COG3142	Participates in the control of copper homeostasis
LIT24_14965	COG0640	Transcriptional regulator
LIT24_14975	COG1960	acyl-CoA dehydrogenase activity
LIT24_14990	COG3314	Sporulation integral membrane protein YlbJ
LIT24_15010	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
LIT24_15025	COG3848	Pyruvate phosphate dikinase
LIT24_15025	COG0574	Belongs to the PEP-utilizing enzyme family
LIT24_15035	COG0367	asparagine synthase
LIT24_15040	COG0583	DNA-binding transcription factor activity
LIT24_15075	COG1522	sequence-specific DNA binding
LIT24_15080	COG1028	Short-chain dehydrogenase reductase Sdr
LIT24_15085	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LIT24_15105	COG1063	alcohol dehydrogenase
LIT24_15115	COG1027	Aspartate ammonia-lyase
LIT24_15120	COG0252	asparaginase activity
LIT24_15125	COG1396	sequence-specific DNA binding
LIT24_15175	COG5002	protein histidine kinase activity
LIT24_15180	COG0745	RESPONSE REGULATOR receiver
LIT24_15190	COG5002	protein histidine kinase activity
LIT24_15215	COG2207	Transcriptional regulator
LIT24_15230	COG0322	excinuclease ABC activity
LIT24_15235	COG0531	amino acid
LIT24_15240	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LIT24_15250	COG0531	amino acid
LIT24_15255	COG0697	spore germination
LIT24_15260	COG0784	Response regulator, receiver
LIT24_15265	COG4191	Histidine kinase
LIT24_15275	COG1115	amino acid carrier protein
LIT24_15300	COG0737	Belongs to the 5'-nucleotidase family
LIT24_15305	COG2267	carboxylic ester hydrolase activity
LIT24_15310	COG1335	isochorismatase
LIT24_15330	COG0583	DNA-binding transcription factor activity
LIT24_15370	COG0598	Magnesium transport protein CorA
LIT24_15390	COG1073	alpha beta
LIT24_15410	COG0415	Belongs to the DNA photolyase family
LIT24_15420	COG1846	Transcriptional regulator
LIT24_15445	COG2814	Major facilitator Superfamily
LIT24_15455	COG0657	acetylesterase activity
LIT24_15460	COG0288	reversible hydration of carbon dioxide
LIT24_15470	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
LIT24_15475	COG5609	conserved protein (DUF2294)
LIT24_15480	COG2814	Major facilitator Superfamily
LIT24_15505	COG0456	acetyltransferase
LIT24_15510	COG1575	Belongs to the MenA family. Type 1 subfamily
LIT24_15535	COG0798	PFAM Bile acid sodium symporter
LIT24_15540	COG0346	lactoylglutathione lyase activity
LIT24_15545	COG0640	Transcriptional regulator
LIT24_15555	COG0561	phosphatase activity
LIT24_15560	COG3320	Male sterility
LIT24_15560	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LIT24_15565	COG1309	transcriptional regulator
LIT24_15580	COG0346	lactoylglutathione lyase activity
LIT24_15670	COG2814	Major facilitator Superfamily
LIT24_15685	COG2515	1-aminocyclopropane-1-carboxylate deaminase
LIT24_15695	COG1690	Belongs to the RtcB family
LIT24_15705	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
LIT24_15725	COG0577	efflux transmembrane transporter activity
LIT24_15740	COG5002	protein histidine kinase activity
LIT24_15740	COG3850	Histidine kinase
LIT24_15750	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LIT24_15780	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
LIT24_15820	COG5632	N-Acetylmuramoyl-L-alanine amidase
LIT24_15820	COG3409	Peptidoglycan-binding domain 1 protein
LIT24_16095	COG5444	nuclease activity
LIT24_16270	COG1876	peptidase activity
LIT24_16275	COG2843	Capsule synthesis protein
LIT24_16285	COG0477	Major facilitator Superfamily
LIT24_16300	COG1846	Transcriptional regulator
LIT24_16305	COG2814	Major facilitator Superfamily
LIT24_16315	COG2031	fatty acid transporter
LIT24_16380	COG1288	antiporter activity
LIT24_16385	COG2356	endonuclease I
LIT24_16405	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
LIT24_16425	COG1733	regulation of RNA biosynthetic process
LIT24_16430	COG0778	Nitroreductase
LIT24_16460	COG1028	Short-chain dehydrogenase reductase Sdr
LIT24_16470	COG1131	(ABC) transporter
LIT24_16495	COG1011	Hydrolase
LIT24_16500	COG2365	Tyrosine phosphatase family
LIT24_16530	COG0628	permease
LIT24_16560	COG0500	methyltransferase
LIT24_16570	COG0477	Major facilitator Superfamily
LIT24_16600	COG1253	flavin adenine dinucleotide binding
LIT24_16605	COG0789	Transcriptional regulator
LIT24_16615	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
LIT24_16645	COG0697	spore germination
LIT24_16655	COG1357	PFAM Pentapeptide repeats (8 copies)
LIT24_16660	COG3813	Protein conserved in bacteria
LIT24_16665	COG2706	6-phosphogluconolactonase activity
LIT24_16670	COG1070	Carbohydrate kinase
LIT24_16680	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
LIT24_16685	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
LIT24_16690	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
LIT24_16695	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
LIT24_16720	COG0840	transmembrane signaling receptor activity
LIT24_16730	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LIT24_16730	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LIT24_16735	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
LIT24_16735	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
LIT24_16740	COG1733	regulation of RNA biosynthetic process
LIT24_16760	COG2824	Alkylphosphonate utilization operon protein PhnA
LIT24_16765	COG0659	secondary active sulfate transmembrane transporter activity
LIT24_16780	COG0814	amino acid
LIT24_16810	COG2188	Transcriptional regulator
LIT24_16815	COG0673	inositol 2-dehydrogenase activity
LIT24_16835	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LIT24_16855	COG0384	phenazine biosynthesis protein PhzF
LIT24_16865	COG0318	PFAM AMP-dependent synthetase and ligase
LIT24_16870	COG2249	NAD(P)H dehydrogenase (quinone) activity
LIT24_16875	COG1733	regulation of RNA biosynthetic process
LIT24_16900	COG1191	sigma factor activity
LIT24_16965	COG1151	hydroxylamine reductase activity
LIT24_16975	COG3757	hydrolase, family 25
LIT24_16975	COG3409	Peptidoglycan-binding domain 1 protein
LIT24_17005	COG2072	flavoprotein involved in K transport
LIT24_17045	COG1113	amino acid transport
LIT24_17050	COG2814	Major facilitator Superfamily
LIT24_17080	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
LIT24_17085	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
LIT24_17095	COG1247	-acetyltransferase
LIT24_17100	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LIT24_17105	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LIT24_17110	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LIT24_17115	COG3739	integral membrane protein
LIT24_17145	COG0583	DNA-binding transcription factor activity
LIT24_17175	COG1193	negative regulation of DNA recombination
LIT24_17190	COG2162	N-hydroxyarylamine O-acetyltransferase activity
LIT24_17195	COG1164	Oligoendopeptidase f
LIT24_17225	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
LIT24_17250	COG0584	glycerophosphoryl diester phosphodiesterase
LIT24_17260	COG0640	Transcriptional regulator
LIT24_17265	COG0604	alcohol dehydrogenase
LIT24_17275	COG0457	Tetratricopeptide repeat
LIT24_17285	COG2808	Putative FMN-binding domain
LIT24_17305	COG0277	FAD linked oxidase domain protein
LIT24_17330	COG1183	phosphatidylcholine synthase activity
LIT24_17335	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LIT24_17335	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LIT24_17340	COG1252	NADH dehydrogenase
LIT24_17350	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
LIT24_17360	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LIT24_17375	COG0457	Tetratricopeptide repeat
LIT24_17425	COG0488	(ABC) transporter
LIT24_17455	COG3852	Histidine kinase
LIT24_17465	COG1285	pathogenesis
LIT24_17475	COG2514	catechol 2,3-dioxygenase activity
LIT24_17480	COG2720	vancomycin resistance protein
LIT24_17515	COG0716	FMN binding
LIT24_17525	COG0494	nUDIX hydrolase
LIT24_17545	COG1028	Short-chain dehydrogenase reductase Sdr
LIT24_17555	COG0165	Argininosuccinate lyase
LIT24_17570	COG4145	pantothenate transmembrane transporter activity
LIT24_17580	COG1012	belongs to the aldehyde dehydrogenase family
LIT24_17585	COG1028	Short-chain dehydrogenase reductase Sdr
LIT24_17595	COG1657	PFAM Prenyltransferase squalene oxidase
LIT24_17600	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
LIT24_17605	COG2962	Rard protein
LIT24_17610	COG3326	Membrane
LIT24_17625	COG0489	protein tyrosine kinase activity
LIT24_17635	COG0314	molybdopterin synthase activity
LIT24_17640	COG0303	'Molybdopterin
LIT24_17645	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
LIT24_17650	COG2116	formate transmembrane transporter activity
LIT24_17660	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
LIT24_17665	COG5609	conserved protein (DUF2294)
LIT24_17670	COG2427	Protein of unknown function (DUF1641)
LIT24_17675	COG3383	formate dehydrogenase (NAD+) activity
LIT24_17680	COG0697	spore germination
LIT24_17695	COG0531	amino acid
LIT24_17730	COG2226	methyltransferase
LIT24_17735	COG4166	transmembrane transport
LIT24_17740	COG4166	transmembrane transport
LIT24_17745	COG4166	transmembrane transport
LIT24_17750	COG1316	TRANSCRIPTIONal
LIT24_17760	COG1595	DNA-templated transcription, initiation
LIT24_17770	COG1131	(ABC) transporter
LIT24_17790	COG0673	inositol 2-dehydrogenase activity
LIT24_17795	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LIT24_17800	COG0187	DNA topoisomerase II activity
LIT24_17805	COG1832	CoA-binding protein
LIT24_17810	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LIT24_17815	COG0745	RESPONSE REGULATOR receiver
LIT24_17835	COG4841	protein insertion into membrane
LIT24_17840	COG0824	Thioesterase
LIT24_17870	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LIT24_17885	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
LIT24_17915	COG2211	Major facilitator Superfamily
LIT24_17925	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
LIT24_17950	COG0183	Belongs to the thiolase family
LIT24_17955	COG0318	PFAM AMP-dependent synthetase and ligase
LIT24_17960	COG1268	BioY protein
LIT24_17965	COG0318	PFAM AMP-dependent synthetase and ligase
LIT24_17970	COG1396	sequence-specific DNA binding
LIT24_17995	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
LIT24_18015	COG0830	nickel cation binding
LIT24_18055	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LIT24_18065	COG5002	protein histidine kinase activity
LIT24_18070	COG0400	carboxylic ester hydrolase activity
LIT24_18075	COG0346	lactoylglutathione lyase activity
LIT24_18085	COG0069	glutamate synthase activity
LIT24_18090	COG1902	pentaerythritol trinitrate reductase activity
LIT24_18095	COG1329	Transcriptional regulator
LIT24_18100	COG0010	Belongs to the arginase family
LIT24_18125	COG2226	methyltransferase
LIT24_18150	COG4846	Membrane protein involved in cytochrome C biogenesis
LIT24_18155	COG0785	Cytochrome C biogenesis protein
LIT24_18165	COG1473	amidohydrolase
LIT24_18175	COG1131	(ABC) transporter
LIT24_18190	COG0583	DNA-binding transcription factor activity
LIT24_18200	COG1346	cytolysis
LIT24_18215	COG0730	response to heat
LIT24_18240	COG1132	(ABC) transporter
LIT24_18245	COG1132	(ABC) transporter
LIT24_18280	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LIT24_18285	COG0737	Belongs to the 5'-nucleotidase family
LIT24_18295	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
LIT24_18315	COG1695	Transcriptional regulator
LIT24_18320	COG0174	glutamine synthetase
LIT24_18325	COG0789	Transcriptional regulator
LIT24_18330	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
LIT24_18335	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LIT24_18340	COG2860	membrane
LIT24_18350	COG0464	growth
LIT24_18380	COG3584	3D domain protein
LIT24_18380	COG1388	LysM domain
LIT24_18385	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LIT24_18385	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LIT24_18385	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LIT24_18390	COG1105	Belongs to the carbohydrate kinase PfkB family
LIT24_18395	COG1349	DNA-binding transcription factor activity
LIT24_18400	COG1979	alcohol dehydrogenase
LIT24_18405	COG2322	membrane
LIT24_18415	COG1113	amino acid transport
LIT24_18425	COG1408	metallophosphoesterase
LIT24_18430	COG2116	formate transmembrane transporter activity
LIT24_18445	COG2217	Heavy metal translocating P-type atpase
LIT24_18450	COG2608	mercury ion transmembrane transporter activity
LIT24_18455	COG1937	Protein conserved in bacteria
LIT24_18460	COG1464	Belongs to the NlpA lipoprotein family
LIT24_18470	COG2819	hydrolase of the alpha beta superfamily
LIT24_18475	COG1120	ATPase activity
LIT24_18480	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LIT24_18485	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LIT24_18490	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LIT24_18500	COG2169	Transcriptional regulator
LIT24_18505	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
LIT24_18510	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
LIT24_18530	COG2267	carboxylic ester hydrolase activity
LIT24_18535	COG5001	Diguanylate cyclase
LIT24_18535	COG3300	MHYT domain
LIT24_18555	COG1086	Polysaccharide biosynthesis protein
LIT24_18575	COG1346	cytolysis
LIT24_18585	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LIT24_18595	COG0823	Involved in the tonB-independent uptake of proteins
LIT24_18600	COG1404	Belongs to the peptidase S8 family
LIT24_18605	COG3773	Cell wall hydrolase
LIT24_18615	COG1368	sulfuric ester hydrolase activity
LIT24_18620	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
LIT24_18645	COG4550	Control of competence regulator ComK, YlbF/YmcA
LIT24_18655	COG1013	pyruvate-flavodoxin oxidoreductase activity
LIT24_18660	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
LIT24_18660	COG0674	pyruvate-flavodoxin oxidoreductase activity
LIT24_18670	COG2359	stage V sporulation protein S
LIT24_18675	COG1692	metallophosphoesterase
LIT24_18695	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LIT24_18700	COG1426	Protein conserved in bacteria
LIT24_18715	COG0300	oxidoreductase activity
LIT24_18720	COG0612	Peptidase, M16
LIT24_18725	COG0612	Peptidase, M16
LIT24_18730	COG1079	Belongs to the binding-protein-dependent transport system permease family
LIT24_18735	COG4603	Belongs to the binding-protein-dependent transport system permease family
LIT24_18740	COG3845	ABC transporter
LIT24_18745	COG1744	ABC transporter substrate-binding protein PnrA-like
LIT24_18750	COG2188	Transcriptional regulator
LIT24_18765	COG0740	serine-type endopeptidase activity
LIT24_18770	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LIT24_18780	COG0527	aspartate kinase activity
LIT24_18785	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
LIT24_18790	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
LIT24_18795	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LIT24_18800	COG1873	PFAM PRC-barrel domain
LIT24_18805	COG0612	Peptidase, M16
LIT24_18810	COG0726	polysaccharide deacetylase
LIT24_18825	COG0196	riboflavin kinase activity
LIT24_18835	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
LIT24_18840	COG1550	Protein conserved in bacteria
LIT24_18850	COG1358	cellular component organization or biogenesis
LIT24_18855	COG2740	Nucleic-acid-binding protein implicated in transcription termination
LIT24_18860	COG0195	Participates in both transcription termination and antitermination
LIT24_18880	COG0750	zinc metalloprotease
LIT24_18890	COG4589	Belongs to the CDS family
LIT24_18935	COG4974	Belongs to the 'phage' integrase family
LIT24_18945	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LIT24_18950	COG0758	DNA mediated transformation
LIT24_18955	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
LIT24_18995	COG1837	Belongs to the UPF0109 family
LIT24_19005	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
LIT24_19015	COG0552	protein localization to endoplasmic reticulum
LIT24_19020	COG1196	nuclear chromosome segregation
LIT24_19030	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LIT24_19035	COG1028	Short-chain dehydrogenase reductase Sdr
LIT24_19040	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
LIT24_19055	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
LIT24_19060	COG1461	Dihydroxyacetone kinase
LIT24_19065	COG1302	Protein conserved in bacteria
LIT24_19080	COG1564	THIamine pyrophosphokinase
LIT24_19085	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
LIT24_19095	COG0515	serine threonine protein kinase
LIT24_19095	COG2815	serine threonine protein kinase
LIT24_19100	COG0631	protein serine/threonine phosphatase activity
LIT24_19110	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
LIT24_19110	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LIT24_19125	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
LIT24_19130	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
LIT24_19150	COG1561	YicC-like family, N-terminal region
LIT24_19155	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
LIT24_19165	COG0006	proline dipeptidase activity
LIT24_19175	COG3069	C4-dicarboxylate transmembrane transporter activity
LIT24_19185	COG0546	phosphoglycolate phosphatase activity
LIT24_19240	COG0564	pseudouridine synthase activity
LIT24_19260	COG3599	regulation of cell shape
LIT24_19265	COG2302	S4 RNA-binding domain
LIT24_19270	COG0762	integral membrane protein
LIT24_19280	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
LIT24_19290	COG1873	PFAM PRC-barrel domain
LIT24_19295	COG1191	sigma factor activity
LIT24_19300	COG1191	sigma factor activity
LIT24_19310	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
LIT24_19315	COG0849	cell division
LIT24_19335	COG0772	Belongs to the SEDS family
LIT24_19355	COG0768	penicillin binding
LIT24_19360	COG0768	penicillin binding
LIT24_19380	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
LIT24_19395	COG0333	Belongs to the bacterial ribosomal protein bL32 family
LIT24_19400	COG1399	metal-binding, possibly nucleic acid-binding protein
LIT24_19410	COG3480	Lon protease (S16) C-terminal proteolytic domain
LIT24_19415	COG1752	Esterase of the alpha-beta hydrolase superfamily
LIT24_19420	COG3314	Sporulation integral membrane protein YlbJ
LIT24_19430	COG0742	ribosomal rna small subunit methyltransferase
LIT24_19445	COG3679	Belongs to the UPF0342 family
LIT24_19450	COG0406	alpha-ribazole phosphatase activity
LIT24_19465	COG2340	Cysteine-rich secretory protein family
LIT24_19480	COG3336	cytochrome c oxidase
LIT24_19515	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
LIT24_19520	COG0772	Belongs to the SEDS family
LIT24_19530	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
LIT24_19535	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
LIT24_19545	COG4896	Protein conserved in bacteria
LIT24_19560	COG1217	gtp-binding protein TYPA
LIT24_19570	COG0483	inositol monophosphate 1-phosphatase activity
LIT24_19590	COG1982	Orn Lys Arg decarboxylase major
LIT24_19640	COG0022	dehydrogenase e1 component
LIT24_19645	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
LIT24_19660	COG0561	phosphatase activity
LIT24_19670	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LIT24_19675	COG0569	domain protein
LIT24_19695	COG0583	DNA-binding transcription factor activity
LIT24_19700	COG0517	IMP dehydrogenase activity
LIT24_19710	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
LIT24_19720	COG4703	Protein of unknown function (DUF1797)
LIT24_19735	COG2200	EAL domain
LIT24_19740	COG1028	Short-chain dehydrogenase reductase Sdr
LIT24_19745	COG1408	metallophosphoesterase
LIT24_19790	COG2814	Major facilitator Superfamily
LIT24_19810	COG3209	COG3209 Rhs family protein
LIT24_19820	COG2205	protein histidine kinase activity
LIT24_19830	COG0436	Aminotransferase
LIT24_19835	COG1609	Transcriptional regulator
LIT24_19840	COG3833	ABC-type maltose transport systems, permease component
LIT24_19845	COG1175	transmembrane transport
LIT24_19850	COG2182	Extracellular solute-binding protein
LIT24_19860	COG0366	Alpha amylase catalytic
LIT24_19865	COG3842	ATPase activity
LIT24_19905	COG0183	Belongs to the thiolase family
LIT24_19940	COG1695	Transcriptional regulator
LIT24_19945	COG1028	Short-chain dehydrogenase reductase Sdr
LIT24_19965	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LIT24_19970	COG0436	Aminotransferase
LIT24_20005	COG2084	Dehydrogenase
LIT24_20015	COG2199	diguanylate cyclase activity
LIT24_20020	COG0778	Nitroreductase
LIT24_20045	COG1263	PTS System
LIT24_20045	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LIT24_20045	COG2190	(PTS) system
LIT24_20050	COG3711	transcriptional antiterminator
LIT24_20060	COG2188	Transcriptional regulator
LIT24_20070	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
LIT24_20095	COG1547	Domain of unknown function (DUF309)
LIT24_20100	COG0456	acetyltransferase
LIT24_20105	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LIT24_20110	COG4086	secreted protein
LIT24_20115	COG0561	phosphatase activity
LIT24_20120	COG0697	spore germination
LIT24_20135	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LIT24_20160	COG0733	neurotransmitter:sodium symporter activity
LIT24_20180	COG1686	Belongs to the peptidase S11 family
LIT24_20185	COG1725	Transcriptional regulator
LIT24_20190	COG1131	(ABC) transporter
LIT24_20210	COG1846	Transcriptional regulator
LIT24_20225	COG0598	Magnesium transport protein CorA
LIT24_20250	COG4974	Belongs to the 'phage' integrase family
LIT24_20260	COG0735	belongs to the Fur family
LIT24_20265	COG1300	Membrane
LIT24_20285	COG0667	Aldo Keto reductase
LIT24_20290	COG0656	L-ascorbic acid biosynthetic process
LIT24_20295	COG0456	acetyltransferase
LIT24_20295	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
LIT24_20305	COG1525	nuclease
LIT24_20305	COG4085	toxin activity
LIT24_20305	COG0737	Belongs to the 5'-nucleotidase family
LIT24_20315	COG0596	Alpha beta hydrolase
LIT24_20320	COG2056	Na+-H+ antiporter family
LIT24_20325	COG1609	Transcriptional regulator
LIT24_20330	COG0456	acetyltransferase
LIT24_20335	COG1073	alpha beta
LIT24_20350	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LIT24_20350	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LIT24_20355	COG0307	riboflavin synthase, alpha
LIT24_20385	COG2226	methyltransferase
LIT24_20385	COG1073	alpha beta
LIT24_20400	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
LIT24_20410	COG1757	Na H antiporter
LIT24_20415	COG0737	Belongs to the 5'-nucleotidase family
LIT24_20425	COG1522	sequence-specific DNA binding
LIT24_20470	COG0300	oxidoreductase activity
LIT24_20475	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LIT24_20480	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LIT24_20485	COG1760	l-serine dehydratase
LIT24_20490	COG1760	l-serine dehydratase
LIT24_20530	COG2195	Cleaves the N-terminal amino acid of tripeptides
LIT24_20535	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LIT24_20550	COG1376	ErfK ybiS ycfS ynhG family protein
LIT24_20555	COG4129	membrane
LIT24_20560	COG1126	abc transporter atp-binding protein
LIT24_20565	COG0765	amino acid transport
LIT24_20570	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LIT24_20590	COG2323	membrane
LIT24_20595	COG0772	Belongs to the SEDS family
LIT24_20600	COG0508	dehydrogenase complex catalyzes the overall conversion of
LIT24_20605	COG0022	dehydrogenase e1 component
LIT24_20610	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
LIT24_20615	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LIT24_20630	COG0280	phosphate acetyltransferase
LIT24_20635	COG3290	protein histidine kinase activity
LIT24_20635	COG3829	transcription factor binding
LIT24_20645	COG0584	glycerophosphoryl diester phosphodiesterase
LIT24_20650	COG3093	addiction module antidote protein HigA
LIT24_20665	COG0750	zinc metalloprotease
LIT24_20670	COG0497	DNA recombination
LIT24_20680	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
LIT24_20690	COG0142	geranyltranstransferase activity
LIT24_20715	COG1302	Protein conserved in bacteria
LIT24_20720	COG0439	Biotin carboxylase
LIT24_20725	COG0511	ligase activity, forming carbon-carbon bonds
LIT24_20770	COG3854	ATPases associated with a variety of cellular activities
LIT24_20795	COG0006	proline dipeptidase activity
LIT24_20810	COG3872	metal-dependent enzyme
LIT24_20820	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LIT24_20855	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LIT24_20865	COG1609	Transcriptional regulator
LIT24_20875	COG2076	Multidrug Resistance protein
LIT24_20880	COG2076	Multidrug Resistance protein
LIT24_20910	COG1131	(ABC) transporter
LIT24_20915	COG1725	Transcriptional regulator
LIT24_20945	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
LIT24_21010	COG1459	type II secretion system
LIT24_21015	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
LIT24_21070	COG0646	methionine synthase
LIT24_21070	COG1410	methionine synthase
LIT24_21075	COG0646	methionine synthase
LIT24_21075	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
LIT24_21080	COG0626	cystathionine gamma-synthase activity
LIT24_21085	COG0626	cystathionine gamma-synthase activity
LIT24_21105	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LIT24_21115	COG1940	carbohydrate kinase activity
LIT24_21120	COG4483	Protein conserved in bacteria
LIT24_21125	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
LIT24_21130	COG0267	Belongs to the bacterial ribosomal protein bL33 family
LIT24_21135	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
LIT24_21140	COG0704	Plays a role in the regulation of phosphate uptake
LIT24_21150	COG0573	inorganic phosphate transmembrane transporter activity
LIT24_21155	COG0573	inorganic phosphate transmembrane transporter activity
LIT24_21160	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
LIT24_21165	COG0768	penicillin binding
LIT24_21170	COG0477	Major facilitator Superfamily
LIT24_21175	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
LIT24_21185	COG5521	maltodextrose utilization protein MalA
LIT24_21200	COG0735	belongs to the Fur family
LIT24_21205	COG1108	ABC-type Mn2 Zn2 transport systems permease components
LIT24_21210	COG1121	(ABC) transporter
LIT24_21215	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LIT24_21245	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
LIT24_21250	COG2384	SAM-dependent methyltransferase
LIT24_21260	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
LIT24_21265	COG0358	DNA primase activity
LIT24_21280	COG0517	IMP dehydrogenase activity
LIT24_21295	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
LIT24_21300	COG0295	cytidine deaminase activity
LIT24_21305	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
LIT24_21315	COG1480	7TM receptor with intracellular HD hydrolase
LIT24_21320	COG1702	phosphate starvation-inducible protein PhoH
LIT24_21335	COG1610	YqeY-like protein
LIT24_21340	COG0828	Belongs to the bacterial ribosomal protein bS21 family
LIT24_21345	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
LIT24_21350	COG1385	rRNA (uridine-N3-)-methyltransferase activity
LIT24_21380	COG0635	Involved in the biosynthesis of porphyrin-containing compound
LIT24_21385	COG1733	regulation of RNA biosynthetic process
LIT24_21410	COG1466	dna polymerase III delta subunit
LIT24_21420	COG2333	competence protein COMEC
LIT24_21420	COG0658	competence protein
LIT24_21425	COG2131	deaminase
LIT24_21430	COG1555	photosystem II stabilization
LIT24_21430	COG1596	polysaccharide export
LIT24_21435	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LIT24_21440	COG2226	methyltransferase
LIT24_21445	COG0799	negative regulation of ribosome biogenesis
LIT24_21450	COG1713	HD superfamily hydrolase involved in NAD metabolism
LIT24_21460	COG1534	Rna-binding protein
LIT24_21470	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
LIT24_21475	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
LIT24_21500	COG1595	DNA-templated transcription, initiation
LIT24_21510	COG0778	Nitroreductase
LIT24_21515	COG2357	RelA SpoT domain protein
LIT24_21525	COG1785	Belongs to the alkaline phosphatase family
LIT24_21535	COG2267	carboxylic ester hydrolase activity
LIT24_21570	COG1404	Belongs to the peptidase S8 family
LIT24_21575	COG3186	Phenylalanine-4-hydroxylase
LIT24_21585	COG2514	catechol 2,3-dioxygenase activity
LIT24_21590	COG2259	Doxx family
LIT24_21630	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LIT24_21640	COG1012	belongs to the aldehyde dehydrogenase family
LIT24_21640	COG1454	alcohol dehydrogenase
LIT24_21645	COG0626	cystathionine gamma-synthase activity
LIT24_21650	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
LIT24_21675	COG0768	penicillin binding
LIT24_21695	COG0826	peptidase U32
LIT24_21700	COG0826	peptidase U32
LIT24_21705	COG4122	O-methyltransferase activity
LIT24_21710	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
LIT24_21740	COG0628	permease
LIT24_21760	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
LIT24_21775	COG1104	cysteine desulfurase activity
LIT24_21780	COG1959	2 iron, 2 sulfur cluster binding
LIT24_21785	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
LIT24_21795	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
LIT24_21820	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LIT24_21830	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
LIT24_21830	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
LIT24_21835	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
LIT24_21840	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LIT24_21840	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LIT24_21850	COG2244	polysaccharide biosynthetic process
LIT24_21855	COG2323	membrane
LIT24_21865	COG1862	Preprotein translocase
LIT24_21895	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LIT24_21925	COG0157	Belongs to the NadC ModD family
LIT24_21930	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
LIT24_21935	COG1104	cysteine desulfurase activity
LIT24_21940	COG1827	regulation of RNA biosynthetic process
LIT24_21945	COG2258	MOSC domain
LIT24_21955	COG0077	Prephenate dehydratase
LIT24_21960	COG0577	efflux transmembrane transporter activity
LIT24_21965	COG0577	efflux transmembrane transporter activity
LIT24_21970	COG1136	(ABC) transporter
LIT24_21975	COG5002	protein histidine kinase activity
LIT24_21980	COG0745	RESPONSE REGULATOR receiver
LIT24_21990	COG3290	protein histidine kinase activity
LIT24_22000	COG2868	ribosomal protein
LIT24_22010	COG1530	ribonuclease E activity
LIT24_22015	COG1994	Peptidase M50
LIT24_22020	COG0739	heme binding
LIT24_22025	COG2894	cell division
LIT24_22045	COG1077	Cell shape determining protein MreB Mrl
LIT24_22065	COG0285	dihydrofolate synthase activity
LIT24_22080	COG1388	LysM domain
LIT24_22090	COG0113	porphobilinogen synthase activity
LIT24_22095	COG1587	Uroporphyrinogen-III synthase
LIT24_22105	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
LIT24_22115	COG1846	Transcriptional regulator
LIT24_22120	COG1764	response to oxidative stress
LIT24_22135	COG0470	DNA polymerase III
LIT24_22135	COG1067	ATP-dependent peptidase activity
LIT24_22180	COG0622	Phosphoesterase
LIT24_22195	COG5401	PFAM Sporulation and spore germination
LIT24_22210	COG2197	response regulator
LIT24_22215	COG2233	PERMEase
LIT24_22220	COG0402	S-adenosylhomocysteine deaminase activity
LIT24_22225	COG1983	PspC domain protein
LIT24_22230	COG1396	sequence-specific DNA binding
LIT24_22235	COG0697	spore germination
LIT24_22245	COG1959	2 iron, 2 sulfur cluster binding
LIT24_22250	COG1668	transmembrane transport
LIT24_22255	COG4152	abc transporter atp-binding protein
LIT24_22260	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
LIT24_22265	COG1360	Flagellar Motor Protein
LIT24_22270	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
LIT24_22275	COG1876	peptidase activity
LIT24_22280	COG0824	Thioesterase
LIT24_22285	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
LIT24_22290	COG1053	succinate dehydrogenase
LIT24_22295	COG2009	succinate dehydrogenase
LIT24_22300	COG1719	4-vinyl reductase, 4VR
LIT24_22310	COG3118	belongs to the thioredoxin family
LIT24_22315	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
LIT24_22320	COG2086	electron transfer activity
LIT24_22325	COG1024	Enoyl-CoA hydratase
LIT24_22330	COG1309	transcriptional regulator
LIT24_22335	COG0318	PFAM AMP-dependent synthetase and ligase
LIT24_22365	COG2318	DinB family
LIT24_22395	COG1131	(ABC) transporter
LIT24_22400	COG2205	protein histidine kinase activity
LIT24_22405	COG0745	RESPONSE REGULATOR receiver
LIT24_22415	COG4895	conserved protein (DUF2196)
LIT24_22420	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
LIT24_22430	COG4509	Sortase family
LIT24_22435	COG1120	ATPase activity
LIT24_22450	COG5386	Cell surface protein
LIT24_22460	COG5386	Cell surface protein
LIT24_22465	COG1114	Component of the transport system for branched-chain amino acids
LIT24_22470	COG1187	pseudouridine synthase activity
LIT24_22480	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
LIT24_22480	COG1796	DNA polymerase
LIT24_22485	COG1286	toxin biosynthetic process
LIT24_22530	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LIT24_22540	COG1418	mRNA catabolic process
LIT24_22560	COG2814	Major facilitator Superfamily
LIT24_22565	COG1566	PFAM secretion protein HlyD family protein
LIT24_22570	COG1309	transcriptional regulator
LIT24_22575	COG1363	Peptidase, m42
LIT24_22600	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
LIT24_22615	COG1484	DNA-dependent DNA replication
LIT24_22620	COG3611	Membrane attachment protein
LIT24_22630	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
LIT24_22635	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
LIT24_22645	COG1971	Probably functions as a manganese efflux pump
LIT24_22655	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LIT24_22655	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LIT24_22660	COG5002	protein histidine kinase activity
LIT24_22665	COG0745	RESPONSE REGULATOR receiver
LIT24_22685	COG0538	isocitrate dehydrogenase activity
LIT24_22690	COG0372	Belongs to the citrate synthase family
LIT24_22700	COG0628	permease
LIT24_22705	COG3030	protein affecting phage T7 exclusion by the F plasmid
LIT24_22730	COG1725	Transcriptional regulator
LIT24_22735	COG0281	malic enzyme
LIT24_22740	COG0587	DNA-directed DNA polymerase activity
LIT24_22755	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
LIT24_22770	COG4109	DRTGG domain
LIT24_22785	COG0006	proline dipeptidase activity
LIT24_22830	COG0662	Cupin 2, conserved barrel domain protein
LIT24_22845	COG1028	Short-chain dehydrogenase reductase Sdr
LIT24_22850	COG0589	response to stress
LIT24_22895	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LIT24_22920	COG0827	DNA restriction-modification system
LIT24_22925	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
LIT24_22930	COG3874	Sporulation protein YtfJ
LIT24_22955	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
LIT24_22970	COG1104	cysteine desulfurase activity
LIT24_22980	COG0583	DNA-binding transcription factor activity
LIT24_22985	COG0697	spore germination
LIT24_22990	COG1309	transcriptional regulator
LIT24_22995	COG1956	GAF domain-containing protein
LIT24_23000	COG0626	cystathionine gamma-synthase activity
LIT24_23065	COG0110	maltose O-acetyltransferase activity
LIT24_23070	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
LIT24_23075	COG0454	-acetyltransferase
LIT24_23080	COG0517	IMP dehydrogenase activity
LIT24_23085	COG0123	including yeast histone deacetylase and acetoin utilization protein
LIT24_23100	COG0745	RESPONSE REGULATOR receiver
LIT24_23105	COG5002	protein histidine kinase activity
LIT24_23110	COG0666	response to abiotic stimulus
LIT24_23145	COG1609	Transcriptional regulator
LIT24_23150	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
LIT24_23150	COG1605	Chorismate mutase
LIT24_23155	COG4851	CamS sex pheromone cAM373 precursor
LIT24_23160	COG3118	belongs to the thioredoxin family
LIT24_23170	COG2309	aminopeptidase activity
LIT24_23185	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LIT24_23200	COG1674	ftsk spoiiie
LIT24_23205	COG1388	LysM domain
LIT24_23205	COG0860	N-Acetylmuramoyl-L-alanine amidase
LIT24_23215	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LIT24_23225	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LIT24_23230	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
LIT24_23235	COG1363	Peptidase, m42
LIT24_23245	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LIT24_23260	COG0510	thiamine kinase activity
LIT24_23265	COG1523	belongs to the glycosyl hydrolase 13 family
LIT24_23275	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LIT24_23280	COG1349	DNA-binding transcription factor activity
LIT24_23285	COG1187	pseudouridine synthase activity
LIT24_23290	COG2244	polysaccharide biosynthetic process
LIT24_23295	COG2081	HI0933 family
LIT24_23300	COG2814	Major facilitator Superfamily
LIT24_23310	COG3832	glyoxalase III activity
LIT24_23330	COG1329	Transcriptional regulator
LIT24_23355	COG0314	molybdopterin synthase activity
LIT24_23360	COG1763	Mo-molybdopterin cofactor biosynthetic process
LIT24_23365	COG0303	'Molybdopterin
LIT24_23375	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
LIT24_23380	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
LIT24_23400	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LIT24_23410	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
LIT24_23455	COG2814	Major facilitator Superfamily
LIT24_23460	COG0475	glutathione-regulated potassium exporter activity
LIT24_23465	COG0490	domain, Protein
LIT24_23470	COG0582	viral genome integration into host DNA
LIT24_23480	COG1136	(ABC) transporter
LIT24_23500	COG1242	4 iron, 4 sulfur cluster binding
LIT24_23505	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
LIT24_23510	COG1794	racemase activity, acting on amino acids and derivatives
LIT24_23525	COG2267	carboxylic ester hydrolase activity
LIT24_23530	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
LIT24_23535	COG0671	phosphoesterase, PA-phosphatase related
LIT24_23540	COG0438	transferase activity, transferring glycosyl groups
LIT24_23565	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LIT24_23610	COG0546	phosphoglycolate phosphatase activity
LIT24_23615	COG1349	DNA-binding transcription factor activity
LIT24_23625	COG5002	protein histidine kinase activity
LIT24_23630	COG3852	Histidine kinase
LIT24_23635	COG2267	carboxylic ester hydrolase activity
LIT24_23640	COG1368	sulfuric ester hydrolase activity
LIT24_23665	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
LIT24_23670	COG1116	anion transmembrane transporter activity
LIT24_23675	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LIT24_23700	COG0494	nUDIX hydrolase
LIT24_23730	COG2076	Multidrug Resistance protein
LIT24_23735	COG2076	Multidrug Resistance protein
LIT24_23740	COG0789	Transcriptional regulator
LIT24_23745	COG1854	S-ribosylhomocysteine lyase activity
LIT24_23755	COG0288	reversible hydration of carbon dioxide
LIT24_23760	COG1271	oxidase subunit
LIT24_23765	COG1294	oxidase, subunit
LIT24_23780	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LIT24_23800	COG1842	Phage shock protein A
LIT24_23825	COG3859	Proton-coupled thiamine transporter YuaJ
LIT24_23830	COG5002	protein histidine kinase activity
LIT24_23835	COG0745	RESPONSE REGULATOR receiver
LIT24_23860	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
LIT24_23865	COG1597	lipid kinase activity
LIT24_23895	COG0586	Pfam SNARE associated Golgi protein
LIT24_23905	COG0577	efflux transmembrane transporter activity
LIT24_23910	COG1136	(ABC) transporter
LIT24_23915	COG3708	Transcriptional regulator
LIT24_23915	COG2207	Transcriptional regulator
LIT24_23925	COG1131	(ABC) transporter
LIT24_23930	COG5658	integral membrane protein
LIT24_23935	COG0640	Transcriptional regulator
LIT24_23940	COG0745	RESPONSE REGULATOR receiver
LIT24_23945	COG2205	protein histidine kinase activity
LIT24_23950	COG0577	efflux transmembrane transporter activity
LIT24_23955	COG0577	efflux transmembrane transporter activity
LIT24_23960	COG1136	(ABC) transporter
LIT24_23965	COG0577	efflux transmembrane transporter activity
LIT24_23980	COG2188	Transcriptional regulator
LIT24_24000	COG3964	amidohydrolase
LIT24_24020	COG4948	Mandelate Racemase Muconate Lactonizing
LIT24_24030	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
LIT24_24035	COG0596	Alpha beta hydrolase
LIT24_24045	COG1169	isochorismate synthase
LIT24_24050	COG1575	Belongs to the MenA family. Type 1 subfamily
LIT24_24055	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
LIT24_24080	COG0058	SHG alpha-glucan phosphorylase activity
LIT24_24090	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
LIT24_24205	COG0544	peptidyl-prolyl cis-trans isomerase activity
LIT24_24240	COG1285	pathogenesis
LIT24_24245	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
LIT24_24260	COG2155	Conserved Protein
LIT24_24265	COG1098	S1 RNA binding domain
LIT24_24270	COG0436	Aminotransferase
LIT24_24275	COG1522	sequence-specific DNA binding
LIT24_24280	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LIT24_24285	COG2267	carboxylic ester hydrolase activity
LIT24_24295	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
LIT24_24315	COG5018	Exonuclease
LIT24_24320	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
LIT24_24340	COG2050	protein possibly involved in aromatic compounds catabolism
LIT24_24350	COG1268	BioY protein
LIT24_24355	COG1210	Utp--glucose-1-phosphate uridylyltransferase
LIT24_24360	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LIT24_24380	COG2076	Multidrug Resistance protein
LIT24_24385	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
LIT24_24400	COG3584	3D domain protein
LIT24_24415	COG1252	NADH dehydrogenase
LIT24_24430	COG3708	Transcriptional regulator
LIT24_24445	COG1683	Conserved Protein
LIT24_24455	COG0316	Belongs to the HesB IscA family
LIT24_24470	COG1252	NADH dehydrogenase
LIT24_24480	COG2274	protein secretion by the type I secretion system
LIT24_24485	COG0390	transport system, permease component
LIT24_24490	COG2824	Alkylphosphonate utilization operon protein PhnA
LIT24_24515	COG4837	Protein of unknown function (DUF1462)
LIT24_24520	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
LIT24_24530	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
LIT24_24535	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
LIT24_24555	COG1358	cellular component organization or biogenesis
LIT24_24565	COG2249	NAD(P)H dehydrogenase (quinone) activity
LIT24_24570	COG0647	UMP catabolic process
LIT24_24580	COG2445	Protein of unknown function DUF86
LIT24_24585	COG1494	fructose-1,6-bisphosphatase
LIT24_24600	COG4470	Protein conserved in bacteria
LIT24_24610	COG0789	Transcriptional regulator
LIT24_24615	COG4377	Putative membrane peptidase family (DUF2324)
LIT24_24640	COG0739	heme binding
LIT24_24650	COG3377	Domain of unknown function (DUF1805)
LIT24_24655	COG0737	Belongs to the 5'-nucleotidase family
LIT24_24660	COG0719	Fe-S assembly protein
LIT24_24665	COG0822	iron-sulfur transferase activity
LIT24_24670	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
LIT24_24675	COG0719	Fe-S assembly protein
LIT24_24680	COG0396	ATPase activity
LIT24_24685	COG1464	Belongs to the NlpA lipoprotein family
LIT24_24690	COG2011	ABC-type metal ion transport system permease component
LIT24_24705	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LIT24_24710	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
LIT24_24720	COG1393	Belongs to the ArsC family
LIT24_24740	COG0039	L-malate dehydrogenase activity
LIT24_24760	COG1309	transcriptional regulator
LIT24_24765	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LIT24_24770	COG1960	acyl-CoA dehydrogenase activity
LIT24_24775	COG0183	Belongs to the thiolase family
LIT24_24780	COG1250	3-hydroxyacyl-CoA dehydrogenase
LIT24_24780	COG1024	Enoyl-CoA hydratase
LIT24_24790	COG1686	Belongs to the peptidase S11 family
LIT24_24805	COG0011	TIGRFAM Protein of
LIT24_24810	COG0840	transmembrane signaling receptor activity
LIT24_24825	COG2814	Major facilitator Superfamily
LIT24_24830	COG0531	amino acid
LIT24_24850	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LIT24_24885	COG0586	Pfam SNARE associated Golgi protein
LIT24_24895	COG1376	ErfK ybiS ycfS ynhG family protein
LIT24_24900	COG0745	RESPONSE REGULATOR receiver
LIT24_24905	COG5002	protein histidine kinase activity
LIT24_24935	COG0840	transmembrane signaling receptor activity
LIT24_24940	COG2151	metal-sulfur cluster biosynthetic enzyme
LIT24_24945	COG3227	Zinc metalloprotease (Elastase)
LIT24_24950	COG1741	Belongs to the pirin family
LIT24_24965	COG0586	Pfam SNARE associated Golgi protein
LIT24_24970	COG0475	glutathione-regulated potassium exporter activity
LIT24_24975	COG0490	domain, Protein
LIT24_24980	COG1115	amino acid carrier protein
LIT24_24985	COG0783	Belongs to the Dps family
LIT24_25005	COG1611	Belongs to the LOG family
LIT24_25015	COG1528	Iron-storage protein
LIT24_25020	COG2311	Membrane
LIT24_25025	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LIT24_25030	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LIT24_25035	COG1115	amino acid carrier protein
LIT24_25040	COG1115	amino acid carrier protein
LIT24_25045	COG2910	NAD(P)H-binding
LIT24_25060	COG0656	L-ascorbic acid biosynthetic process
LIT24_25065	COG2814	Major facilitator Superfamily
LIT24_25070	COG1733	regulation of RNA biosynthetic process
LIT24_25080	COG1252	NADH dehydrogenase
LIT24_25100	COG3290	protein histidine kinase activity
LIT24_25100	COG0840	transmembrane signaling receptor activity
LIT24_25135	COG0488	(ABC) transporter
LIT24_25140	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LIT24_25185	COG0745	RESPONSE REGULATOR receiver
LIT24_25205	COG0557	exoribonuclease II activity
LIT24_25210	COG1647	Serine aminopeptidase, S33
LIT24_25215	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
LIT24_25220	COG1346	cytolysis
LIT24_25255	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
LIT24_25270	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
LIT24_25295	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LIT24_25310	COG2323	membrane
LIT24_25320	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
LIT24_25330	COG0391	Required for morphogenesis under gluconeogenic growth conditions
LIT24_25340	COG1051	belongs to the nudix hydrolase family
LIT24_25350	COG0492	ferredoxin-NADP+ reductase activity
LIT24_25355	COG0457	Tetratricopeptide repeat
LIT24_25360	COG0110	maltose O-acetyltransferase activity
LIT24_25380	COG1950	PFAM Membrane protein of
LIT24_25390	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
LIT24_25395	COG0556	nucleotide-excision repair
LIT24_25410	COG0789	Transcriptional regulator
LIT24_25430	COG0583	DNA-binding transcription factor activity
LIT24_25440	COG0655	NAD(P)H dehydrogenase (quinone) activity
LIT24_25445	COG0488	(ABC) transporter
LIT24_25455	COG1132	(ABC) transporter
LIT24_25460	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LIT24_25465	COG0793	Belongs to the peptidase S41A family
LIT24_25465	COG3409	Peptidoglycan-binding domain 1 protein
LIT24_25470	COG2177	Part of the ABC transporter FtsEX involved in
LIT24_25475	COG2884	Cell division ATP-binding protein ftsE
LIT24_25500	COG1131	(ABC) transporter
LIT24_25530	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
LIT24_25535	COG1278	Cold shock
LIT24_25540	COG1040	competence protein
LIT24_25545	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
LIT24_25550	COG1388	LysM domain
LIT24_25550	COG0791	NLP P60 protein
LIT24_25555	COG1733	regulation of RNA biosynthetic process
LIT24_25560	COG1307	EDD domain protein, DegV family
LIT24_25565	COG1739	Uncharacterized protein family UPF0029
LIT24_25570	COG1316	TRANSCRIPTIONal
LIT24_25575	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
LIT24_25580	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
LIT24_25585	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
LIT24_25595	COG3933	PFAM sigma-54 factor interaction domain-containing protein
LIT24_25595	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
LIT24_25615	COG1486	melibiose metabolic process
LIT24_25620	COG1447	Phosphotransferase system cellobiose-specific component IIA
LIT24_25625	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
LIT24_25635	COG1447	Phosphotransferase system cellobiose-specific component IIA
LIT24_25645	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
LIT24_25650	COG1301	dicarboxylic acid transport
LIT24_25665	COG1511	domain protein
LIT24_25670	COG0583	DNA-binding transcription factor activity
LIT24_25675	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
LIT24_25685	COG1271	oxidase subunit
LIT24_25690	COG1294	oxidase, subunit
LIT24_25695	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
LIT24_25705	COG1620	l-lactate permease
LIT24_25715	COG2389	metal-binding protein
LIT24_25725	COG1368	sulfuric ester hydrolase activity
LIT24_25735	COG1388	LysM domain
LIT24_25735	COG0791	NLP P60 protein
LIT24_25740	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LIT24_25750	COG1215	transferase activity, transferring glycosyl groups
LIT24_25755	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
LIT24_25760	COG3584	3D domain protein
LIT24_25760	COG1388	LysM domain
LIT24_25785	COG4715	Zinc finger, swim domain protein
LIT24_25790	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
LIT24_25830	COG0577	efflux transmembrane transporter activity
LIT24_25835	COG1136	(ABC) transporter
LIT24_25870	COG5002	protein histidine kinase activity
LIT24_25875	COG0745	RESPONSE REGULATOR receiver
LIT24_25885	COG2244	polysaccharide biosynthetic process
LIT24_25895	COG1316	TRANSCRIPTIONal
LIT24_25905	COG1091	dTDP-4-dehydrorhamnose reductase activity
LIT24_25920	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
LIT24_25940	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
LIT24_25945	COG1210	Utp--glucose-1-phosphate uridylyltransferase
LIT24_25950	COG4464	protein tyrosine phosphatase activity
LIT24_25955	COG0489	protein tyrosine kinase activity
LIT24_25960	COG3944	biosynthesis protein
LIT24_25965	COG0489	protein tyrosine kinase activity
LIT24_25980	COG1609	Transcriptional regulator
LIT24_25990	COG0739	heme binding
LIT24_26005	COG4555	ABC transporter
LIT24_26010	COG2385	sporulation resulting in formation of a cellular spore
LIT24_26025	COG4836	Membrane
LIT24_26030	COG1007	ATP synthesis coupled electron transport
LIT24_26035	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LIT24_26040	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
LIT24_26050	COG0839	Belongs to the complex I subunit 6 family
LIT24_26070	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LIT24_26085	COG3300	MHYT domain
LIT24_26085	COG5001	Diguanylate cyclase
LIT24_26135	COG0356	it plays a direct role in the translocation of protons across the membrane
LIT24_26170	COG0698	ribose 5-phosphate isomerase
LIT24_26185	COG2259	Doxx family
LIT24_26190	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
LIT24_26205	COG0009	L-threonylcarbamoyladenylate synthase
LIT24_26240	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
LIT24_26245	COG1494	fructose-1,6-bisphosphatase
LIT24_26265	COG4821	SIS domain
LIT24_26275	COG3343	RNA polymerase activity
LIT24_26285	COG1960	acyl-CoA dehydrogenase activity
LIT24_26290	COG1960	acyl-CoA dehydrogenase activity
LIT24_26295	COG1250	3-hydroxyacyl-CoA dehydrogenase
LIT24_26300	COG0183	Belongs to the thiolase family
LIT24_26305	COG2181	nitrate reductase activity
LIT24_26305	COG0247	lactate metabolic process
LIT24_26310	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LIT24_26320	COG5001	Diguanylate cyclase
LIT24_26320	COG3300	MHYT domain
LIT24_26335	COG3227	Zinc metalloprotease (Elastase)
LIT24_26340	COG2197	response regulator
LIT24_26345	COG4585	Histidine kinase
LIT24_26350	COG0842	Transport permease protein
LIT24_26355	COG1131	(ABC) transporter
LIT24_26360	COG0024	Methionine aminopeptidase
LIT24_26370	COG2234	aminopeptidase activity
LIT24_26390	COG1595	DNA-templated transcription, initiation
LIT24_26400	COG4506	Protein conserved in bacteria
LIT24_26405	COG1619	proteins homologs of microcin C7 resistance protein MccF
LIT24_26430	COG2814	Major facilitator Superfamily
LIT24_26435	COG0789	Transcriptional regulator
LIT24_26440	COG0584	glycerophosphoryl diester phosphodiesterase
LIT24_26445	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LIT24_26455	COG1994	Peptidase M50
LIT24_26465	COG1078	dGTPase activity
LIT24_26470	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LIT24_26475	COG1120	ATPase activity
LIT24_26480	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LIT24_26485	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LIT24_26505	COG0280	phosphate acetyltransferase
LIT24_26520	COG3773	Cell wall hydrolase
LIT24_26530	COG2363	Small membrane protein
LIT24_26540	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
LIT24_26545	COG2233	PERMEase
LIT24_26550	COG0561	phosphatase activity
LIT24_26555	COG2814	Major facilitator Superfamily
LIT24_26565	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
LIT24_26570	COG1131	(ABC) transporter
LIT24_26575	COG2755	lipolytic protein G-D-S-L family
LIT24_26580	COG1609	Transcriptional regulator
LIT24_26590	COG0460	homoserine dehydrogenase
LIT24_26600	COG2873	o-acetylhomoserine
LIT24_26610	COG1011	Hydrolase
LIT24_26615	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
LIT24_26625	COG2197	response regulator
LIT24_26630	COG4585	Histidine kinase
LIT24_26630	COG2203	Gaf domain
LIT24_26635	COG0351	phosphomethylpyrimidine kinase
LIT24_26640	COG3706	GGDEF domain
LIT24_26645	COG2879	small protein
LIT24_26650	COG1966	Carbon starvation protein
LIT24_26655	COG3279	Response regulator of the LytR AlgR family
LIT24_26660	COG0477	Major facilitator Superfamily
LIT24_26670	COG0438	transferase activity, transferring glycosyl groups
LIT24_26685	COG0840	transmembrane signaling receptor activity
LIT24_26695	COG1607	acyl-coa hydrolase
LIT24_26700	COG1216	Glycosyl transferase, family 2
LIT24_26710	COG1216	Glycosyl transferase, family 2
LIT24_26725	COG0488	(ABC) transporter
LIT24_26730	COG1309	transcriptional regulator
LIT24_26735	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LIT24_26740	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LIT24_26740	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LIT24_26745	COG0628	permease
LIT24_26765	COG3275	phosphorelay sensor kinase activity
LIT24_26770	COG2814	Major facilitator Superfamily
LIT24_26775	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
LIT24_26780	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
LIT24_26800	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
LIT24_26805	COG1272	protein, Hemolysin III
LIT24_26835	COG5002	protein histidine kinase activity
LIT24_26850	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LIT24_26855	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
LIT24_26860	COG4853	Protein conserved in bacteria
LIT24_26870	COG5002	protein histidine kinase activity
LIT24_26875	COG0745	RESPONSE REGULATOR receiver
LIT24_26905	COG0305	Participates in initiation and elongation during chromosome replication
LIT24_26915	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
LIT24_26940	COG0012	GTP binding
LIT24_26945	COG4481	Protein conserved in bacteria
LIT24_26950	COG0668	transmembrane transport
LIT24_26960	COG1475	DNA binding
LIT24_26965	COG1192	Involved in chromosome partitioning
LIT24_26990	COG1847	R3H domain protein
LIT24_27005	COG0230	Belongs to the bacterial ribosomal protein bL34 family
LIT24_27040	COG0457	Tetratricopeptide repeat
LIT24_27070	COG1404	Belongs to the peptidase S8 family
LIT24_27100	COG0697	spore germination
LIT24_27110	COG3397	chitin binding
LIT24_27115	COG0823	Involved in the tonB-independent uptake of proteins
LIT24_27145	COG5002	protein histidine kinase activity
LIT24_27145	COG3850	Histidine kinase
LIT24_27150	COG0745	RESPONSE REGULATOR receiver
LIT24_27160	COG1136	(ABC) transporter
LIT24_27165	COG0577	efflux transmembrane transporter activity
LIT24_27190	COG2814	Major facilitator Superfamily
LIT24_27215	COG0318	PFAM AMP-dependent synthetase and ligase
LIT24_27220	COG2259	Doxx family
LIT24_27240	COG4990	cell redox homeostasis
LIT24_27245	COG0745	RESPONSE REGULATOR receiver
LIT24_27250	COG5002	protein histidine kinase activity
LIT24_27260	COG1876	peptidase activity
LIT24_27265	COG4974	Belongs to the 'phage' integrase family
LIT24_27275	COG1131	(ABC) transporter
LIT24_27280	COG3048	D-serine ammonia-lyase activity
LIT24_27295	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LIT24_27300	COG0506	proline dehydrogenase activity
LIT24_27330	COG1378	Sugar-specific transcriptional regulator TrmB
LIT24_27380	COG2323	membrane
LIT24_27390	COG0640	Transcriptional regulator
LIT24_27395	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
LIT24_27410	COG1802	Transcriptional regulator
LIT24_27415	COG0697	spore germination
LIT24_27435	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
LIT24_27450	COG1533	DNA photolyase activity
LIT24_27485	COG2184	nucleotidyltransferase activity
LIT24_27495	COG1522	sequence-specific DNA binding
LIT24_27500	COG0531	amino acid
LIT24_27520	COG0577	efflux transmembrane transporter activity
LIT24_27525	COG1136	(ABC) transporter
LIT24_27550	COG1028	Short-chain dehydrogenase reductase Sdr
LIT24_27635	COG0076	glutamate decarboxylase activity
LIT24_27670	COG0584	glycerophosphoryl diester phosphodiesterase
LIT24_27705	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LIT24_27740	COG2002	toxin-antitoxin pair type II binding
LIT24_27750	COG2311	Membrane
LIT24_27785	COG1329	Transcriptional regulator
LIT24_27805	COG1278	Cold shock
LIT24_28265	COG0457	Tetratricopeptide repeat
LIT24_28275	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
LIT24_28280	COG0494	nUDIX hydrolase
LIT24_28285	COG0542	response to heat
LIT24_28310	COG1522	sequence-specific DNA binding
LIT24_28315	COG0288	reversible hydration of carbon dioxide
LIT24_28320	COG1513	Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide
LIT24_28325	COG2233	PERMEase
LIT24_28350	COG1687	branched-chain amino acid
LIT24_28355	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
LIT24_28360	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LIT24_28375	COG1361	Conserved repeat domain
LIT24_28410	COG0739	heme binding
LIT24_28415	COG3409	Peptidoglycan-binding domain 1 protein
LIT24_28415	COG1388	LysM domain
LIT24_28415	COG5632	N-Acetylmuramoyl-L-alanine amidase
LIT24_28430	COG5632	N-Acetylmuramoyl-L-alanine amidase
LIT24_28525	COG1396	sequence-specific DNA binding
LIT24_28540	COG1309	transcriptional regulator
LIT24_28545	COG0367	asparagine synthase
LIT24_28550	COG4585	Histidine kinase
LIT24_28560	COG1404	Belongs to the peptidase S8 family
LIT24_28580	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LIT24_28600	COG0457	Tetratricopeptide repeat
LIT24_28710	COG0457	Tetratricopeptide repeat
LIT24_28730	COG0457	Tetratricopeptide repeat
LIT24_28755	COG1401	restriction endodeoxyribonuclease activity
LIT24_28900	COG1396	sequence-specific DNA binding
LIT24_28900	COG3800	Transcriptional regulator
LIT24_28920	COG0667	Aldo Keto reductase
LIT24_28945	COG0300	oxidoreductase activity
LIT24_28945	COG0318	PFAM AMP-dependent synthetase and ligase
LIT24_28945	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LIT24_28945	COG0318	PFAM AMP-dependent synthetase and ligase
LIT24_28945	COG0300	oxidoreductase activity
LIT24_28945	COG1028	Short-chain dehydrogenase reductase Sdr
LIT24_28945	COG3321	synthase
LIT24_28945	COG1028	Short-chain dehydrogenase reductase Sdr
LIT24_28945	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LIT24_28945	COG3321	synthase
LIT24_28965	COG1960	acyl-CoA dehydrogenase activity
LIT24_28980	COG1250	3-hydroxyacyl-CoA dehydrogenase
LIT24_28985	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LIT24_29000	COG0318	PFAM AMP-dependent synthetase and ligase
LIT24_29000	COG0300	oxidoreductase activity
LIT24_29000	COG1028	Short-chain dehydrogenase reductase Sdr
LIT24_29000	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LIT24_29000	COG3321	synthase
LIT24_29005	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LIT24_29040	COG1609	Transcriptional regulator
LIT24_29050	COG0561	phosphatase activity
LIT24_29055	COG0673	inositol 2-dehydrogenase activity
LIT24_29060	COG0738	Major facilitator superfamily
LIT24_29080	COG1475	DNA binding
LIT24_29100	COG1132	(ABC) transporter
LIT24_29145	COG5632	N-Acetylmuramoyl-L-alanine amidase
LIT24_29145	COG3409	Peptidoglycan-binding domain 1 protein
LIT24_29205	COG1132	(ABC) transporter
LIT24_29235	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
LIT24_29285	COG1309	transcriptional regulator
LIT24_29305	COG1525	nuclease
LIT24_29315	COG2002	toxin-antitoxin pair type II binding
LIT24_29325	COG3595	metallopeptidase activity
LIT24_29335	COG0789	Transcriptional regulator
LIT24_29350	COG4974	Belongs to the 'phage' integrase family
LIT24_29400	COG0346	lactoylglutathione lyase activity
LIT24_29405	COG4974	Belongs to the 'phage' integrase family
LIT24_29415	COG0138	bifunctional purine biosynthesis protein purh
LIT24_29660	COG3547	Transposase (IS116 IS110 IS902 family)
LIT24_29670	COG0475	glutathione-regulated potassium exporter activity
LIT24_29705	COG0842	Transport permease protein
LIT24_29710	COG1131	(ABC) transporter
LIT24_29715	COG1309	transcriptional regulator
LIT24_29745	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
LIT24_29760	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
LIT24_29765	COG0736	holo-[acyl-carrier-protein] synthase activity
LIT24_29770	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis