locus-tag class description CY96_00010 PF02595 Glycerate kinase family CY96_00015 PF00491 Arginase family CY96_00020 PF02457 DisA bacterial checkpoint controller nucleotide-binding CY96_00025 PF07949 YbbR-like protein CY96_00030 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CY96_00030 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CY96_00030 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CY96_00030 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CY96_00040 PF01380 SIS domain CY96_00050 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region CY96_00050 PF00326 Prolyl oligopeptidase family CY96_00070 PF00528 Binding-protein-dependent transport system inner membrane component CY96_00075 PF09383 NIL domain CY96_00075 PF00005 ABC transporter CY96_00080 PF03180 NLPA lipoprotein CY96_00085 PF08240 Alcohol dehydrogenase GroES-like domain CY96_00085 PF00107 Zinc-binding dehydrogenase CY96_00095 PF01565 FAD binding domain CY96_00100 PF07690 Major Facilitator Superfamily CY96_00110 PF07690 Major Facilitator Superfamily CY96_00125 PF00528 Binding-protein-dependent transport system inner membrane component CY96_00125 PF12911 N-terminal TM domain of oligopeptide transport permease C CY96_00130 PF00005 ABC transporter CY96_00130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CY96_00135 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CY96_00135 PF00005 ABC transporter CY96_00140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CY96_00150 PF12833 Helix-turn-helix domain CY96_00165 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CY96_00170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CY96_00175 PF00248 Aldo/keto reductase family CY96_00180 PF03807 NADP oxidoreductase coenzyme F420-dependent CY96_00180 PF14748 Pyrroline-5-carboxylate reductase dimerisation CY96_00185 PF06800 Sugar transport protein CY96_00190 PF00528 Binding-protein-dependent transport system inner membrane component CY96_00200 PF12727 PBP superfamily domain CY96_00200 PF12728 Helix-turn-helix domain CY96_00215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CY96_00215 PF03466 LysR substrate binding domain CY96_00220 PF00892 EamA-like transporter family CY96_00235 PF01553 Acyltransferase CY96_00250 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CY96_00250 PF00356 Bacterial regulatory proteins, lacI family CY96_00260 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CY96_00260 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CY96_00285 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) CY96_00305 PF12848 ABC transporter CY96_00305 PF00005 ABC transporter CY96_00305 PF16326 ABC transporter C-terminal domain CY96_00315 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CY96_00320 PF00528 Binding-protein-dependent transport system inner membrane component CY96_00330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CY96_00330 PF00005 ABC transporter CY96_00335 PF00005 ABC transporter CY96_00335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CY96_00375 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CY96_00380 PF01557 Fumarylacetoacetate (FAA) hydrolase family CY96_00390 PF13520 Amino acid permease CY96_00395 PF07690 Major Facilitator Superfamily CY96_00400 PF07478 D-ala D-ala ligase C-terminus CY96_00400 PF01820 D-ala D-ala ligase N-terminus CY96_00405 PF08245 Mur ligase middle domain CY96_00405 PF02875 Mur ligase family, glutamate ligase domain CY96_00405 PF01225 Mur ligase family, catalytic domain CY96_00410 PF00271 Helicase conserved C-terminal domain CY96_00410 PF00270 DEAD/DEAH box helicase CY96_00415 PF03851 UV-endonuclease UvdE CY96_00420 PF01694 Rhomboid family CY96_00425 PF01648 4'-phosphopantetheinyl transferase superfamily CY96_00435 PF00842 Alanine racemase, C-terminal domain CY96_00435 PF01168 Alanine racemase, N-terminal domain CY96_00440 PF01402 Ribbon-helix-helix protein, copG family CY96_00445 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CY96_00450 PF16921 Tex protein YqgF-like domain CY96_00450 PF00575 S1 RNA binding domain CY96_00450 PF17674 HHH domain CY96_00450 PF09371 Tex-like protein N-terminal domain CY96_00460 PF17283 SprT-like zinc ribbon domain CY96_00460 PF10263 SprT-like family CY96_00550 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CY96_00555 PF00814 Glycoprotease family CY96_00560 PF00583 Acetyltransferase (GNAT) family CY96_00565 PF00814 Glycoprotease family CY96_00570 PF16326 ABC transporter C-terminal domain CY96_00570 PF12848 ABC transporter CY96_00570 PF00005 ABC transporter CY96_00575 PF06971 Putative DNA-binding protein N-terminus CY96_00575 PF02629 CoA binding domain CY96_00585 PF02517 CPBP intramembrane metalloprotease CY96_00590 PF00166 Chaperonin 10 Kd subunit CY96_00595 PF00118 TCP-1/cpn60 chaperonin family CY96_00600 PF00958 GMP synthase C terminal domain CY96_00600 PF02540 NAD synthase CY96_00600 PF00117 Glutamine amidotransferase class-I CY96_00605 PF00860 Permease family CY96_00610 PF00072 Response regulator receiver domain CY96_00610 PF00486 Transcriptional regulatory protein, C terminal CY96_00615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_00615 PF00512 His Kinase A (phospho-acceptor) domain CY96_00615 PF00989 PAS fold CY96_00615 PF16736 Single Cache-like CY96_00640 PF01323 DSBA-like thioredoxin domain CY96_00665 PF02673 Bacitracin resistance protein BacA CY96_00675 PF00005 ABC transporter CY96_00680 PF00512 His Kinase A (phospho-acceptor) domain CY96_00680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_00685 PF00072 Response regulator receiver domain CY96_00685 PF00486 Transcriptional regulatory protein, C terminal CY96_00705 PF05045 Rhamnan synthesis protein F CY96_00705 PF14307 Glycosyltransferase WbsX CY96_00720 PF01370 NAD dependent epimerase/dehydratase family CY96_00730 PF00535 Glycosyl transferase family 2 CY96_00750 PF00892 EamA-like transporter family CY96_00780 PF00731 AIR carboxylase CY96_00785 PF02222 ATP-grasp domain CY96_00785 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CY96_00790 PF00206 Lyase CY96_00790 PF10397 Adenylosuccinate lyase C-terminus CY96_00795 PF01259 SAICAR synthetase CY96_00800 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase CY96_00810 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CY96_00810 PF02769 AIR synthase related protein, C-terminal domain CY96_00810 PF00586 AIR synthase related protein, N-terminal domain CY96_00815 PF00156 Phosphoribosyl transferase domain CY96_00820 PF02769 AIR synthase related protein, C-terminal domain CY96_00820 PF00586 AIR synthase related protein, N-terminal domain CY96_00825 PF00551 Formyl transferase CY96_00830 PF02142 MGS-like domain CY96_00830 PF01808 AICARFT/IMPCHase bienzyme CY96_00835 PF02844 Phosphoribosylglycinamide synthetase, N domain CY96_00835 PF02843 Phosphoribosylglycinamide synthetase, C domain CY96_00835 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CY96_00855 PF01884 PcrB family CY96_00860 PF13361 UvrD-like helicase C-terminal domain CY96_00860 PF00580 UvrD/REP helicase N-terminal domain CY96_00865 PF12826 Helix-hairpin-helix motif CY96_00865 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CY96_00865 PF03120 NAD-dependent DNA ligase OB-fold domain CY96_00865 PF01653 NAD-dependent DNA ligase adenylation domain CY96_00865 PF00533 BRCA1 C Terminus (BRCT) domain CY96_00870 PF07537 CamS sex pheromone cAM373 precursor CY96_00875 PF01925 Sulfite exporter TauE/SafE CY96_00880 PF00171 Aldehyde dehydrogenase family CY96_00885 PF00857 Isochorismatase family CY96_00890 PF00005 ABC transporter CY96_00890 PF09383 NIL domain CY96_00895 PF00528 Binding-protein-dependent transport system inner membrane component CY96_00900 PF03180 NLPA lipoprotein CY96_00910 PF17886 HSP20-like domain found in ArsA CY96_00910 PF02374 Anion-transporting ATPase CY96_00915 PF01047 MarR family CY96_00920 PF05360 yiaA/B two helix domain CY96_00925 PF02686 Glu-tRNAGln amidotransferase C subunit CY96_00930 PF01425 Amidase CY96_00935 PF02637 GatB domain CY96_00935 PF02934 GatB/GatE catalytic domain CY96_00940 PF00781 Diacylglycerol kinase catalytic domain CY96_00945 PF13419 Haloacid dehalogenase-like hydrolase CY96_00950 PF00202 Aminotransferase class-III CY96_00955 PF00158 Sigma-54 interaction domain CY96_00960 PF00171 Aldehyde dehydrogenase family CY96_00965 PF00893 Small Multidrug Resistance protein CY96_00975 PF02073 Thermophilic metalloprotease (M29) CY96_00995 PF07670 Nucleoside recognition CY96_00995 PF07662 Na+ dependent nucleoside transporter C-terminus CY96_00995 PF01773 Na+ dependent nucleoside transporter N-terminus CY96_01000 PF13847 Methyltransferase domain CY96_01000 PF01938 TRAM domain CY96_01000 PF05958 tRNA (Uracil-5-)-methyltransferase CY96_01005 PF01207 Dihydrouridine synthase (Dus) CY96_01010 PF07308 Protein of unknown function (DUF1456) CY96_01025 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CY96_01025 PF13378 Enolase C-terminal domain-like CY96_01040 PF01546 Peptidase family M20/M25/M40 CY96_01040 PF07687 Peptidase dimerisation domain CY96_01050 PF07992 Pyridine nucleotide-disulphide oxidoreductase CY96_01050 PF13192 Thioredoxin domain CY96_01055 PF00578 AhpC/TSA family CY96_01060 PF01636 Phosphotransferase enzyme family CY96_01070 PF00596 Class II Aldolase and Adducin N-terminal domain CY96_01075 PF01032 FecCD transport family CY96_01080 PF01032 FecCD transport family CY96_01085 PF01497 Periplasmic binding protein CY96_01100 PF12728 Helix-turn-helix domain CY96_01130 PF13188 PAS domain CY96_01130 PF00989 PAS fold CY96_01130 PF00512 His Kinase A (phospho-acceptor) domain CY96_01130 PF13426 PAS domain CY96_01130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_01150 PF10127 RNA repair pathway DNA polymerase beta family CY96_01155 PF07690 Major Facilitator Superfamily CY96_01160 PF01266 FAD dependent oxidoreductase CY96_01160 PF00355 Rieske [2Fe-2S] domain CY96_01170 PF00528 Binding-protein-dependent transport system inner membrane component CY96_01175 PF00497 Bacterial extracellular solute-binding proteins, family 3 CY96_01180 PF00005 ABC transporter CY96_01185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CY96_01185 PF12729 Four helix bundle sensory module for signal transduction CY96_01185 PF00672 HAMP domain CY96_01190 PF01316 Arginine repressor, DNA binding domain CY96_01190 PF02863 Arginine repressor, C-terminal domain CY96_01200 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CY96_01200 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CY96_01205 PF13520 Amino acid permease CY96_01210 PF00696 Amino acid kinase family CY96_01215 PF13545 Crp-like helix-turn-helix domain CY96_01215 PF00027 Cyclic nucleotide-binding domain CY96_01225 PF08031 Berberine and berberine like CY96_01225 PF01565 FAD binding domain CY96_01230 PF16657 Maltogenic Amylase, C-terminal domain CY96_01230 PF00128 Alpha amylase, catalytic domain CY96_01235 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CY96_01235 PF00367 phosphotransferase system, EIIB CY96_01235 PF02378 Phosphotransferase system, EIIC CY96_01240 PF03372 Endonuclease/Exonuclease/phosphatase family CY96_01245 PF01061 ABC-2 type transporter CY96_01250 PF01751 Toprim domain CY96_01250 PF01131 DNA topoisomerase CY96_01255 PF02110 Hydroxyethylthiazole kinase family CY96_01260 PF02581 Thiamine monophosphate synthase CY96_01265 PF03605 Anaerobic c4-dicarboxylate membrane transporter CY96_01270 PF00672 HAMP domain CY96_01270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CY96_01275 PF00501 AMP-binding enzyme CY96_01275 PF07993 Male sterility protein CY96_01275 PF00668 Condensation domain CY96_01275 PF13193 AMP-binding enzyme C-terminal domain CY96_01275 PF00550 Phosphopantetheine attachment site CY96_01280 PF01910 Thiamine-binding protein CY96_01285 PF00528 Binding-protein-dependent transport system inner membrane component CY96_01295 PF00005 ABC transporter CY96_01300 PF00041 Fibronectin type III domain CY96_01300 PF00704 Glycosyl hydrolases family 18 CY96_01325 PF08360 QacR-like protein, C-terminal region CY96_01325 PF00440 Bacterial regulatory proteins, tetR family CY96_01340 PF11700 Vacuole effluxer Atg22 like CY96_01355 PF09180 Prolyl-tRNA synthetase, C-terminal CY96_01355 PF03129 Anticodon binding domain CY96_01355 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CY96_01365 PF00480 ROK family CY96_01370 PF02342 TerD domain CY96_01375 PF02342 TerD domain CY96_01380 PF02342 TerD domain CY96_01385 PF03741 Integral membrane protein TerC family CY96_01390 PF14266 Putative component of 'biosynthetic module' CY96_01395 PF05816 Toxic anion resistance protein (TelA) CY96_01400 PF00689 Cation transporting ATPase, C-terminus CY96_01400 PF00690 Cation transporter/ATPase, N-terminus CY96_01405 PF06569 Protein of unknown function (DUF1128) CY96_01410 PF01451 Low molecular weight phosphotyrosine protein phosphatase CY96_01420 PF03631 Virulence factor BrkB CY96_01430 PF00892 EamA-like transporter family CY96_01440 PF10502 Signal peptidase, peptidase S26 CY96_01450 PF09335 SNARE associated Golgi protein CY96_01465 PF16242 Pyridoxamine 5'-phosphate oxidase like CY96_01470 PF01699 Sodium/calcium exchanger protein CY96_01475 PF14167 YfkD-like protein CY96_01480 PF04055 Radical SAM superfamily CY96_01480 PF08756 YfkB-like domain CY96_01490 PF05683 Fumarase C-terminus CY96_01490 PF05681 Fumarate hydratase (Fumerase) CY96_01495 PF01522 Polysaccharide deacetylase CY96_01500 PF00730 HhH-GPD superfamily base excision DNA repair protein CY96_01505 PF01938 TRAM domain CY96_01505 PF05958 tRNA (Uracil-5-)-methyltransferase CY96_01510 PF01416 tRNA pseudouridine synthase CY96_01520 PF02954 Bacterial regulatory protein, Fis family CY96_01520 PF13426 PAS domain CY96_01520 PF00158 Sigma-54 interaction domain CY96_01530 PF00324 Amino acid permease CY96_01535 PF01546 Peptidase family M20/M25/M40 CY96_01535 PF07687 Peptidase dimerisation domain CY96_01560 PF04960 Glutaminase CY96_01565 PF02378 Phosphotransferase system, EIIC CY96_01565 PF00367 phosphotransferase system, EIIB CY96_01570 PF00144 Beta-lactamase CY96_01585 PF00535 Glycosyl transferase family 2 CY96_01590 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CY96_01590 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CY96_01590 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CY96_01595 PF02911 Formyl transferase, C-terminal domain CY96_01595 PF01370 NAD dependent epimerase/dehydratase family CY96_01595 PF00551 Formyl transferase CY96_01600 PF00535 Glycosyl transferase family 2 CY96_01610 PF02901 Pyruvate formate lyase-like CY96_01610 PF01228 Glycine radical CY96_01615 PF04055 Radical SAM superfamily CY96_01620 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase CY96_01620 PF04101 Glycosyltransferase family 28 C-terminal domain CY96_01635 PF01979 Amidohydrolase family CY96_01640 PF08338 Domain of unknown function (DUF1731) CY96_01640 PF01370 NAD dependent epimerase/dehydratase family CY96_01645 PF02631 RecX family CY96_01660 PF08176 Small acid-soluble spore protein K family CY96_01665 PF14043 WVELL protein CY96_01670 PF04307 LexA-binding, inner membrane-associated putative hydrolase CY96_01675 PF00730 HhH-GPD superfamily base excision DNA repair protein CY96_01675 PF14815 NUDIX domain CY96_01685 PF04259 Small, acid-soluble spore protein, gamma-type CY96_01690 PF14182 YgaB-like protein CY96_01695 PF04167 Protein of unknown function (DUF402) CY96_01700 PF00664 ABC transporter transmembrane region CY96_01700 PF00005 ABC transporter CY96_01705 PF06081 Aromatic acid exporter family member 1 CY96_01710 PF04898 Glutamate synthase central domain CY96_01710 PF00310 Glutamine amidotransferases class-II CY96_01710 PF01645 Conserved region in glutamate synthase CY96_01710 PF01493 GXGXG motif CY96_01715 PF00202 Aminotransferase class-III CY96_01720 PF00005 ABC transporter CY96_01735 PF07885 Ion channel CY96_01740 PF00578 AhpC/TSA family CY96_01745 PF01475 Ferric uptake regulator family CY96_01755 PF11023 Zinc-ribbon containing domain CY96_01850 PF01709 Transcriptional regulator CY96_01855 PF13344 Haloacid dehalogenase-like hydrolase CY96_01855 PF00293 NUDIX domain CY96_01860 PF00912 Transglycosylase CY96_01860 PF00905 Penicillin binding protein transpeptidase domain CY96_01865 PF13462 Thioredoxin CY96_01875 PF08331 Domain of unknown function (DUF1730) CY96_01880 PF12671 Putative amidase domain CY96_01885 PF00588 SpoU rRNA Methylase family CY96_01890 PF00990 Diguanylate cyclase, GGDEF domain CY96_01890 PF00563 EAL domain CY96_01890 PF00498 FHA domain CY96_01900 PF08298 PrkA AAA domain CY96_01900 PF06798 PrkA serine protein kinase C-terminal domain CY96_01905 PF04285 Protein of unknown function (DUF444) CY96_01920 PF02028 BCCT, betaine/carnitine/choline family transporter CY96_01925 PF01752 Collagenase CY96_01925 PF08453 Peptidase family M9 N-terminal CY96_01925 PF18496 Collagenase G catalytic helper subdomain CY96_01935 PF15975 Flotillin CY96_01935 PF01145 SPFH domain / Band 7 family CY96_01940 PF02743 Cache domain CY96_01940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CY96_01940 PF00672 HAMP domain CY96_01945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_01945 PF00989 PAS fold CY96_01945 PF17203 Single cache domain 3 CY96_01945 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CY96_01950 PF00072 Response regulator receiver domain CY96_01950 PF12431 Transcriptional regulator CY96_01955 PF03600 Citrate transporter CY96_01980 PF04309 Glycerol-3-phosphate responsive antiterminator CY96_01985 PF00005 ABC transporter CY96_01985 PF17912 MalK OB fold domain CY96_01990 PF00528 Binding-protein-dependent transport system inner membrane component CY96_01995 PF00528 Binding-protein-dependent transport system inner membrane component CY96_02000 PF13416 Bacterial extracellular solute-binding protein CY96_02010 PF00149 Calcineurin-like phosphoesterase CY96_02015 PF00486 Transcriptional regulatory protein, C terminal CY96_02015 PF00072 Response regulator receiver domain CY96_02020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_02020 PF00512 His Kinase A (phospho-acceptor) domain CY96_02030 PF13529 Peptidase_C39 like family CY96_02035 PF02743 Cache domain CY96_02035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CY96_02035 PF00672 HAMP domain CY96_02040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_02040 PF00989 PAS fold CY96_02040 PF17203 Single cache domain 3 CY96_02040 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CY96_02045 PF00072 Response regulator receiver domain CY96_02050 PF03390 2-hydroxycarboxylate transporter family CY96_02055 PF03949 Malic enzyme, NAD binding domain CY96_02055 PF00390 Malic enzyme, N-terminal domain CY96_02070 PF00892 EamA-like transporter family CY96_02075 PF00155 Aminotransferase class I and II CY96_02075 PF00392 Bacterial regulatory proteins, gntR family CY96_02085 PF00989 PAS fold CY96_02085 PF00512 His Kinase A (phospho-acceptor) domain CY96_02085 PF18698 Histidine kinase sensor domain CY96_02085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_02085 PF00672 HAMP domain CY96_02090 PF00486 Transcriptional regulatory protein, C terminal CY96_02090 PF00072 Response regulator receiver domain CY96_02105 PF13508 Acetyltransferase (GNAT) domain CY96_02105 PF00583 Acetyltransferase (GNAT) family CY96_02110 PF02634 FdhD/NarQ family CY96_02115 PF00037 4Fe-4S binding domain CY96_02115 PF01568 Molydopterin dinucleotide binding domain CY96_02115 PF00384 Molybdopterin oxidoreductase CY96_02115 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CY96_02115 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CY96_02120 PF07849 Protein of unknown function (DUF1641) CY96_02130 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CY96_02130 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CY96_02135 PF13520 Amino acid permease CY96_02145 PF01022 Bacterial regulatory protein, arsR family CY96_02150 PF00403 Heavy-metal-associated domain CY96_02155 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain CY96_02155 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CY96_02155 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CY96_02170 PF03413 Peptidase propeptide and YPEB domain CY96_02170 PF01447 Thermolysin metallopeptidase, catalytic domain CY96_02170 PF02868 Thermolysin metallopeptidase, alpha-helical domain CY96_02170 PF07504 Fungalysin/Thermolysin Propeptide Motif CY96_02190 PF04294 VanW like protein CY96_02195 PF03816 Cell envelope-related transcriptional attenuator domain CY96_02200 PF01773 Na+ dependent nucleoside transporter N-terminus CY96_02200 PF07662 Na+ dependent nucleoside transporter C-terminus CY96_02205 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CY96_02210 PF01595 Cyclin M transmembrane N-terminal domain CY96_02210 PF00571 CBS domain CY96_02210 PF03471 Transporter associated domain CY96_02215 PF10415 Fumarase C C-terminus CY96_02215 PF00206 Lyase CY96_02220 PF02652 L-lactate permease CY96_02225 PF01022 Bacterial regulatory protein, arsR family CY96_02230 PF08141 Small acid-soluble spore protein H family CY96_02235 PF00854 POT family CY96_02240 PF01497 Periplasmic binding protein CY96_02245 PF01032 FecCD transport family CY96_02250 PF01032 FecCD transport family CY96_02255 PF00005 ABC transporter CY96_02260 PF08241 Methyltransferase domain CY96_02265 PF00155 Aminotransferase class I and II CY96_02270 PF01370 NAD dependent epimerase/dehydratase family CY96_02275 PF13344 Haloacid dehalogenase-like hydrolase CY96_02275 PF00293 NUDIX domain CY96_02280 PF00092 von Willebrand factor type A domain CY96_02285 PF07728 AAA domain (dynein-related subfamily) CY96_02290 PF13091 PLD-like domain CY96_02290 PF13396 Phospholipase_D-nuclease N-terminal CY96_02300 PF00563 EAL domain CY96_02300 PF00990 Diguanylate cyclase, GGDEF domain CY96_02300 PF03707 Bacterial signalling protein N terminal repeat CY96_02305 PF13520 Amino acid permease CY96_02310 PF07702 UTRA domain CY96_02310 PF00392 Bacterial regulatory proteins, gntR family CY96_02315 PF02378 Phosphotransferase system, EIIC CY96_02315 PF00367 phosphotransferase system, EIIB CY96_02320 PF00128 Alpha amylase, catalytic domain CY96_02320 PF16657 Maltogenic Amylase, C-terminal domain CY96_02335 PF03323 Bacillus/Clostridium GerA spore germination protein CY96_02340 PF01636 Phosphotransferase enzyme family CY96_02345 PF01235 Sodium:alanine symporter family CY96_02355 PF00005 ABC transporter CY96_02360 PF00497 Bacterial extracellular solute-binding proteins, family 3 CY96_02365 PF00528 Binding-protein-dependent transport system inner membrane component CY96_02370 PF00528 Binding-protein-dependent transport system inner membrane component CY96_02375 PF00324 Amino acid permease CY96_02390 PF13280 WYL domain CY96_02390 PF08279 HTH domain CY96_02395 PF01872 RibD C-terminal domain CY96_02400 PF00672 HAMP domain CY96_02400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_02400 PF00989 PAS fold CY96_02400 PF00512 His Kinase A (phospho-acceptor) domain CY96_02400 PF18698 Histidine kinase sensor domain CY96_02405 PF00072 Response regulator receiver domain CY96_02405 PF00486 Transcriptional regulatory protein, C terminal CY96_02425 PF00916 Sulfate permease family CY96_02425 PF01740 STAS domain CY96_02430 PF00582 Universal stress protein family CY96_02440 PF07690 Major Facilitator Superfamily CY96_02445 PF01047 MarR family CY96_02450 PF07690 Major Facilitator Superfamily CY96_02455 PF00356 Bacterial regulatory proteins, lacI family CY96_02460 PF00294 pfkB family carbohydrate kinase CY96_02465 PF05025 RbsD / FucU transport protein family CY96_02470 PF00005 ABC transporter CY96_02475 PF02653 Branched-chain amino acid transport system / permease component CY96_02480 PF13407 Periplasmic binding protein domain CY96_02485 PF00923 Transaldolase/Fructose-6-phosphate aldolase CY96_02490 PF05547 Immune inhibitor A peptidase M6 CY96_02505 PF08240 Alcohol dehydrogenase GroES-like domain CY96_02505 PF00107 Zinc-binding dehydrogenase CY96_02515 PF00882 Zinc dependent phospholipase C CY96_02520 PF03372 Endonuclease/Exonuclease/phosphatase family CY96_02550 PF02673 Bacitracin resistance protein BacA CY96_02555 PF02743 Cache domain CY96_02555 PF00672 HAMP domain CY96_02555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CY96_02560 PF06725 3D domain CY96_02560 PF01476 LysM domain CY96_02565 PF01381 Helix-turn-helix CY96_02575 PF04203 Sortase domain CY96_02585 PF00854 POT family CY96_02595 PF05525 Branched-chain amino acid transport protein CY96_02610 PF00324 Amino acid permease CY96_02615 PF00860 Permease family CY96_02630 PF13673 Acetyltransferase (GNAT) domain CY96_02640 PF00999 Sodium/hydrogen exchanger family CY96_02640 PF02254 TrkA-N domain CY96_02640 PF02080 TrkA-C domain CY96_02650 PF00510 Cytochrome c oxidase subunit III CY96_02655 PF00115 Cytochrome C and Quinol oxidase polypeptide I CY96_02660 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CY96_02675 PF13529 Peptidase_C39 like family CY96_02680 PF01546 Peptidase family M20/M25/M40 CY96_02680 PF07687 Peptidase dimerisation domain CY96_02685 PF11755 Protein of unknown function (DUF3311) CY96_02690 PF00474 Sodium:solute symporter family CY96_02695 PF03323 Bacillus/Clostridium GerA spore germination protein CY96_02700 PF03845 Spore germination protein CY96_02705 PF05504 Spore germination B3/ GerAC like, C-terminal CY96_02715 PF07670 Nucleoside recognition CY96_02715 PF07664 Ferrous iron transport protein B C terminus CY96_02715 PF17910 FeoB cytosolic helical domain CY96_02715 PF02421 Ferrous iron transport protein B CY96_02720 PF07664 Ferrous iron transport protein B C terminus CY96_02720 PF17910 FeoB cytosolic helical domain CY96_02720 PF02421 Ferrous iron transport protein B CY96_02720 PF07670 Nucleoside recognition CY96_02725 PF17910 FeoB cytosolic helical domain CY96_02725 PF07664 Ferrous iron transport protein B C terminus CY96_02725 PF02421 Ferrous iron transport protein B CY96_02725 PF04023 FeoA domain CY96_02725 PF07670 Nucleoside recognition CY96_02730 PF12849 PBP superfamily domain CY96_02735 PF00528 Binding-protein-dependent transport system inner membrane component CY96_02740 PF00528 Binding-protein-dependent transport system inner membrane component CY96_02745 PF00873 AcrB/AcrD/AcrF family CY96_02780 PF05697 Bacterial trigger factor protein (TF) CY96_02780 PF05698 Bacterial trigger factor protein (TF) C-terminus CY96_02860 PF00571 CBS domain CY96_02875 PF08239 Bacterial SH3 domain CY96_02875 PF00246 Zinc carboxypeptidase CY96_02880 PF03070 TENA/THI-4/PQQC family CY96_02885 PF00005 ABC transporter CY96_02890 PF00528 Binding-protein-dependent transport system inner membrane component CY96_02895 PF09084 NMT1/THI5 like CY96_02900 PF02581 Thiamine monophosphate synthase CY96_02905 PF01266 FAD dependent oxidoreductase CY96_02910 PF02597 ThiS family CY96_02915 PF05690 Thiazole biosynthesis protein ThiG CY96_02920 PF00899 ThiF family CY96_02925 PF08543 Phosphomethylpyrimidine kinase CY96_02950 PF03814 Potassium-transporting ATPase A subunit CY96_02960 PF02669 K+-transporting ATPase, c chain CY96_02965 PF02702 Osmosensitive K+ channel His kinase sensor domain CY96_02970 PF07690 Major Facilitator Superfamily CY96_02975 PF01047 MarR family CY96_02995 PF00860 Permease family CY96_03005 PF17969 L,D-transpeptidase C-terminal domain CY96_03005 PF03734 L,D-transpeptidase catalytic domain CY96_03015 PF00294 pfkB family carbohydrate kinase CY96_03020 PF00251 Glycosyl hydrolases family 32 N-terminal domain CY96_03020 PF08244 Glycosyl hydrolases family 32 C terminal CY96_03025 PF00367 phosphotransferase system, EIIB CY96_03025 PF02378 Phosphotransferase system, EIIC CY96_03030 PF13407 Periplasmic binding protein domain CY96_03030 PF00356 Bacterial regulatory proteins, lacI family CY96_03040 PF00085 Thioredoxin CY96_03045 PF02600 Disulfide bond formation protein DsbB CY96_03050 PF14148 YhdB-like protein CY96_03060 PF03845 Spore germination protein CY96_03070 PF03323 Bacillus/Clostridium GerA spore germination protein CY96_03080 PF00881 Nitroreductase family CY96_03085 PF04293 SpoVR like protein CY96_03095 PF00089 Trypsin CY96_03100 PF07992 Pyridine nucleotide-disulphide oxidoreductase CY96_03100 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CY96_03105 PF02583 Metal-sensitive transcriptional repressor CY96_03110 PF00581 Rhodanese-like domain CY96_03110 PF01206 Sulfurtransferase TusA CY96_03115 PF00581 Rhodanese-like domain CY96_03115 PF00753 Metallo-beta-lactamase superfamily CY96_03120 PF01206 Sulfurtransferase TusA CY96_03125 PF01206 Sulfurtransferase TusA CY96_03125 PF00581 Rhodanese-like domain CY96_03135 PF13686 DsrE/DsrF/DrsH-like family CY96_03140 PF01925 Sulfite exporter TauE/SafE CY96_03150 PF03816 Cell envelope-related transcriptional attenuator domain CY96_03155 PF08240 Alcohol dehydrogenase GroES-like domain CY96_03155 PF00107 Zinc-binding dehydrogenase CY96_03160 PF02690 Na+/Pi-cotransporter CY96_03165 PF07690 Major Facilitator Superfamily CY96_03175 PF05043 Mga helix-turn-helix domain CY96_03175 PF08279 HTH domain CY96_03175 PF00874 PRD domain CY96_03175 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CY96_03180 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CY96_03185 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CY96_03190 PF02378 Phosphotransferase system, EIIC CY96_03205 PF01476 LysM domain CY96_03205 PF06725 3D domain CY96_03210 PF02687 FtsX-like permease family CY96_03210 PF12704 MacB-like periplasmic core domain CY96_03215 PF00005 ABC transporter CY96_03225 PF09529 Integral membrane protein (intg_mem_TP0381) CY96_03240 PF05525 Branched-chain amino acid transport protein CY96_03245 PF05067 Manganese containing catalase CY96_03250 PF12652 CotJB protein CY96_03255 PF11007 Spore coat associated protein JA (CotJA) CY96_03270 PF02735 Ku70/Ku80 beta-barrel domain CY96_03280 PF09335 SNARE associated Golgi protein CY96_03315 PF13520 Amino acid permease CY96_03320 PF00999 Sodium/hydrogen exchanger family CY96_03330 PF01380 SIS domain CY96_03330 PF01418 Helix-turn-helix domain, rpiR family CY96_03335 PF13580 SIS domain CY96_03340 PF02378 Phosphotransferase system, EIIC CY96_03340 PF00367 phosphotransferase system, EIIB CY96_03350 PF07681 DoxX CY96_03365 PF00892 EamA-like transporter family CY96_03370 PF01037 Lrp/AsnC ligand binding domain CY96_03375 PF00583 Acetyltransferase (GNAT) family CY96_03375 PF14698 Argininosuccinate lyase C-terminal CY96_03375 PF00206 Lyase CY96_03380 PF00106 short chain dehydrogenase CY96_03385 PF13411 MerR HTH family regulatory protein CY96_03390 PF00893 Small Multidrug Resistance protein CY96_03400 PF00440 Bacterial regulatory proteins, tetR family CY96_03400 PF17934 Tetracyclin repressor-like, C-terminal domain CY96_03405 PF07690 Major Facilitator Superfamily CY96_03420 PF00486 Transcriptional regulatory protein, C terminal CY96_03420 PF00072 Response regulator receiver domain CY96_03425 PF00512 His Kinase A (phospho-acceptor) domain CY96_03425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_03435 PF00005 ABC transporter CY96_03440 PF02687 FtsX-like permease family CY96_03440 PF12704 MacB-like periplasmic core domain CY96_03445 PF00005 ABC transporter CY96_03450 PF02687 FtsX-like permease family CY96_03465 PF01638 HxlR-like helix-turn-helix CY96_03475 PF02525 Flavodoxin-like fold CY96_03480 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CY96_03480 PF12793 Sugar transport-related sRNA regulator N-term CY96_03485 PF07690 Major Facilitator Superfamily CY96_03500 PF01965 DJ-1/PfpI family CY96_03515 PF13520 Amino acid permease CY96_03520 PF01177 Asp/Glu/Hydantoin racemase CY96_03530 PF00171 Aldehyde dehydrogenase family CY96_03540 PF00005 ABC transporter CY96_03540 PF00664 ABC transporter transmembrane region CY96_03545 PF00664 ABC transporter transmembrane region CY96_03545 PF00005 ABC transporter CY96_03550 PF00497 Bacterial extracellular solute-binding proteins, family 3 CY96_03555 PF00528 Binding-protein-dependent transport system inner membrane component CY96_03560 PF00005 ABC transporter CY96_03565 PF00269 Small, acid-soluble spore proteins, alpha/beta type CY96_03575 PF14398 YheC/D like ATP-grasp CY96_03585 PF04286 Protein of unknown function (DUF445) CY96_03590 PF06133 Control of competence regulator ComK, YlbF/YmcA CY96_03605 PF00205 Thiamine pyrophosphate enzyme, central domain CY96_03605 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CY96_03605 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CY96_03610 PF03306 Alpha-acetolactate decarboxylase CY96_03615 PF02245 Methylpurine-DNA glycosylase (MPG) CY96_03625 PF04650 YSIRK type signal peptide CY96_03625 PF10425 C-terminus of bacterial fibrinogen-binding adhesin CY96_03625 PF17210 SdrD B-like domain CY96_03625 PF00746 LPXTG cell wall anchor motif CY96_03625 PF17961 Bacterial Ig domain CY96_03630 PF01510 N-acetylmuramoyl-L-alanine amidase CY96_03630 PF01471 Putative peptidoglycan binding domain CY96_03635 PF04055 Radical SAM superfamily CY96_03640 PF13193 AMP-binding enzyme C-terminal domain CY96_03640 PF00501 AMP-binding enzyme CY96_03660 PF01740 STAS domain CY96_03660 PF00916 Sulfate permease family CY96_03665 PF14667 Polysaccharide biosynthesis C-terminal domain CY96_03665 PF01943 Polysaccharide biosynthesis protein CY96_03685 PF00378 Enoyl-CoA hydratase/isomerase CY96_03705 PF05343 M42 glutamyl aminopeptidase CY96_03710 PF00395 S-layer homology domain CY96_03710 PF01520 N-acetylmuramoyl-L-alanine amidase CY96_03725 PF05544 Proline racemase CY96_03730 PF02423 Ornithine cyclodeaminase/mu-crystallin family CY96_03740 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CY96_03745 PF00528 Binding-protein-dependent transport system inner membrane component CY96_03750 PF12911 N-terminal TM domain of oligopeptide transport permease C CY96_03750 PF00528 Binding-protein-dependent transport system inner membrane component CY96_03755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CY96_03755 PF00005 ABC transporter CY96_03760 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CY96_03760 PF00005 ABC transporter CY96_03770 PF16123 Hydroxyacylglutathione hydrolase C-terminus CY96_03770 PF00753 Metallo-beta-lactamase superfamily CY96_03800 PF06013 Proteins of 100 residues with WXG CY96_03815 PF14436 Bacterial EndoU nuclease CY96_03815 PF04740 LXG domain of WXG superfamily CY96_03845 PF07348 Syd protein (SUKH-2) CY96_03870 PF00083 Sugar (and other) transporter CY96_03875 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CY96_03875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_03880 PF00072 Response regulator receiver domain CY96_03880 PF08279 HTH domain CY96_03880 PF12431 Transcriptional regulator CY96_03885 PF03401 Tripartite tricarboxylate transporter family receptor CY96_03915 PF13411 MerR HTH family regulatory protein CY96_03915 PF06445 GyrI-like small molecule binding domain CY96_03930 PF00772 DnaB-like helicase N terminal domain CY96_03930 PF03796 DnaB-like helicase C terminal domain CY96_03945 PF01925 Sulfite exporter TauE/SafE CY96_03955 PF00158 Sigma-54 interaction domain CY96_03955 PF13426 PAS domain CY96_03955 PF02954 Bacterial regulatory protein, Fis family CY96_03965 PF03606 C4-dicarboxylate anaerobic carrier CY96_03980 PF07690 Major Facilitator Superfamily CY96_04005 PF13302 Acetyltransferase (GNAT) domain CY96_04095 PF13026 Protein of unknown function (DUF3887) CY96_04095 PF12146 Serine aminopeptidase, S33 CY96_04160 PF01066 CDP-alcohol phosphatidyltransferase CY96_04180 PF02733 Dak1 domain CY96_04190 PF02733 Dak1 domain CY96_04225 PF00395 S-layer homology domain CY96_04260 PF11181 Heat induced stress protein YflT CY96_04280 PF01740 STAS domain CY96_04285 PF13581 Histidine kinase-like ATPase domain CY96_04290 PF04542 Sigma-70 region 2 CY96_04290 PF04539 Sigma-70 region 3 CY96_04290 PF04545 Sigma-70, region 4 CY96_04300 PF07228 Stage II sporulation protein E (SpoIIE) CY96_04300 PF13426 PAS domain CY96_04305 PF01739 CheR methyltransferase, SAM binding domain CY96_04305 PF03705 CheR methyltransferase, all-alpha domain CY96_04310 PF00512 His Kinase A (phospho-acceptor) domain CY96_04310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_04310 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CY96_04310 PF01627 Hpt domain CY96_04310 PF00072 Response regulator receiver domain CY96_04310 PF00672 HAMP domain CY96_04335 PF01906 Putative heavy-metal-binding CY96_04350 PF08240 Alcohol dehydrogenase GroES-like domain CY96_04350 PF00107 Zinc-binding dehydrogenase CY96_04355 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family CY96_04380 PF00149 Calcineurin-like phosphoesterase CY96_04385 PF13514 AAA domain CY96_04390 PF01966 HD domain CY96_04390 PF01336 OB-fold nucleic acid binding domain CY96_04395 PF00144 Beta-lactamase CY96_04410 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CY96_04415 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CY96_04420 PF17874 MalT-like TPR region CY96_04420 PF18801 response regulator aspartate phosphatase H, N terminal CY96_04430 PF00561 alpha/beta hydrolase fold CY96_04430 PF08386 TAP-like protein CY96_04435 PF14147 Sporulation protein YhaL CY96_04450 PF00190 Cupin CY96_04455 PF01381 Helix-turn-helix CY96_04460 PF04309 Glycerol-3-phosphate responsive antiterminator CY96_04465 PF00230 Major intrinsic protein CY96_04470 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CY96_04470 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CY96_04475 PF01266 FAD dependent oxidoreductase CY96_04475 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CY96_04480 PF03551 Transcriptional regulator PadR-like family CY96_04500 PF13538 UvrD-like helicase C-terminal domain CY96_04520 PF01047 MarR family CY96_04525 PF12732 YtxH-like protein CY96_04530 PF01230 HIT domain CY96_04535 PF00005 ABC transporter CY96_04540 PF05975 Bacterial ABC transporter protein EcsB CY96_04545 PF12787 EcsC protein family CY96_04555 PF00440 Bacterial regulatory proteins, tetR family CY96_04555 PF17934 Tetracyclin repressor-like, C-terminal domain CY96_04565 PF03703 Bacterial PH domain CY96_04570 PF03703 Bacterial PH domain CY96_04600 PF10014 2OG-Fe dioxygenase CY96_04610 PF00892 EamA-like transporter family CY96_04615 PF03703 Bacterial PH domain CY96_04620 PF03703 Bacterial PH domain CY96_04625 PF03992 Antibiotic biosynthesis monooxygenase CY96_04630 PF00905 Penicillin binding protein transpeptidase domain CY96_04630 PF00912 Transglycosylase CY96_04635 PF01208 Uroporphyrinogen decarboxylase (URO-D) CY96_04670 PF03965 Penicillinase repressor CY96_04680 PF00440 Bacterial regulatory proteins, tetR family CY96_04680 PF17932 Tetracyclin repressor-like, C-terminal domain CY96_04710 PF00356 Bacterial regulatory proteins, lacI family CY96_04720 PF12706 Beta-lactamase superfamily domain CY96_04725 PF10437 Bacterial lipoate protein ligase C-terminus CY96_04725 PF03099 Biotin/lipoate A/B protein ligase family CY96_04735 PF13193 AMP-binding enzyme C-terminal domain CY96_04735 PF00501 AMP-binding enzyme CY96_04740 PF00395 S-layer homology domain CY96_04740 PF01520 N-acetylmuramoyl-L-alanine amidase CY96_04750 PF00528 Binding-protein-dependent transport system inner membrane component CY96_04755 PF00528 Binding-protein-dependent transport system inner membrane component CY96_04760 PF12857 TOBE-like domain CY96_04760 PF00005 ABC transporter CY96_04760 PF17850 CysA C-terminal regulatory domain CY96_04765 PF07968 Leukocidin/Hemolysin toxin family CY96_04770 PF00149 Calcineurin-like phosphoesterase CY96_04775 PF01966 HD domain CY96_04785 PF04542 Sigma-70 region 2 CY96_04785 PF08281 Sigma-70, region 4 CY96_04790 PF12833 Helix-turn-helix domain CY96_04790 PF06445 GyrI-like small molecule binding domain CY96_04800 PF00512 His Kinase A (phospho-acceptor) domain CY96_04800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_04805 PF00072 Response regulator receiver domain CY96_04805 PF00486 Transcriptional regulatory protein, C terminal CY96_04825 PF01435 Peptidase family M48 CY96_04825 PF16491 CAAX prenyl protease N-terminal, five membrane helices CY96_04830 PF00672 HAMP domain CY96_04830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CY96_04830 PF02743 Cache domain CY96_04835 PF06452 Carbohydrate family 9 binding domain-like CY96_04835 PF02018 Carbohydrate binding domain CY96_04835 PF00395 S-layer homology domain CY96_04835 PF00331 Glycosyl hydrolase family 10 CY96_04850 PF01274 Malate synthase CY96_04855 PF00463 Isocitrate lyase family CY96_04870 PF00313 'Cold-shock' DNA-binding domain CY96_04895 PF09335 SNARE associated Golgi protein CY96_04900 PF10502 Signal peptidase, peptidase S26 CY96_04905 PF13361 UvrD-like helicase C-terminal domain CY96_04905 PF12705 PD-(D/E)XK nuclease superfamily CY96_04910 PF00580 UvrD/REP helicase N-terminal domain CY96_04910 PF13361 UvrD-like helicase C-terminal domain CY96_04910 PF12705 PD-(D/E)XK nuclease superfamily CY96_04920 PF10676 Spore germination protein gerPA/gerPF CY96_04925 PF10970 Spore germination protein GerPE CY96_04935 PF10737 Spore germination protein GerPC CY96_04940 PF10803 Spore germination GerPB CY96_04945 PF10676 Spore germination protein gerPA/gerPF CY96_04950 PF09388 Spo0E like sporulation regulatory protein CY96_04955 PF01557 Fumarylacetoacetate (FAA) hydrolase family CY96_04965 PF00202 Aminotransferase class-III CY96_04980 PF13537 Glutamine amidotransferase domain CY96_04980 PF00733 Asparagine synthase CY96_04990 PF00199 Catalase CY96_04990 PF06628 Catalase-related immune-responsive CY96_04995 PF00909 Ammonium Transporter Family CY96_05000 PF00128 Alpha amylase, catalytic domain CY96_05005 PF04461 Protein of unknown function (DUF520) CY96_05010 PF13509 S1 domain CY96_05010 PF17783 CvfB-like winged helix domain CY96_05025 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CY96_05025 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CY96_05030 PF12758 Protein of unknown function (DUF3813) CY96_05045 PF14168 YjzC-like protein CY96_05050 PF00004 ATPase family associated with various cellular activities (AAA) CY96_05050 PF07724 AAA domain (Cdc48 subfamily) CY96_05050 PF17871 AAA lid domain CY96_05050 PF02861 Clp amino terminal domain, pathogenicity island component CY96_05050 PF10431 C-terminal, D2-small domain, of ClpB protein CY96_05070 PF10815 ComZ CY96_05075 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CY96_05075 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CY96_05080 PF00109 Beta-ketoacyl synthase, N-terminal domain CY96_05080 PF02801 Beta-ketoacyl synthase, C-terminal domain CY96_05085 PF10026 Predicted Zn-dependent protease (DUF2268) CY96_05090 PF12227 Protein of unknown function (DUF3603) CY96_05110 PF00579 tRNA synthetases class I (W and Y) CY96_05120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CY96_05125 PF00528 Binding-protein-dependent transport system inner membrane component CY96_05130 PF00528 Binding-protein-dependent transport system inner membrane component CY96_05130 PF12911 N-terminal TM domain of oligopeptide transport permease C CY96_05135 PF00005 ABC transporter CY96_05135 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CY96_05140 PF00005 ABC transporter CY96_05140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CY96_05145 PF01554 MatE CY96_05150 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CY96_05160 PF03960 ArsC family CY96_05165 PF03741 Integral membrane protein TerC family CY96_05170 PF05389 Negative regulator of genetic competence (MecA) CY96_05175 PF13091 PLD-like domain CY96_05175 PF13396 Phospholipase_D-nuclease N-terminal CY96_05185 PF08439 Oligopeptidase F CY96_05185 PF01432 Peptidase family M3 CY96_05200 PF01152 Bacterial-like globin CY96_05205 PF01928 CYTH domain CY96_05215 PF04607 Region found in RelA / SpoT proteins CY96_05220 PF01513 ATP-NAD kinase CY96_05225 PF00849 RNA pseudouridylate synthase CY96_05235 PF00149 Calcineurin-like phosphoesterase CY96_05240 PF01098 Cell cycle protein CY96_05245 PF00535 Glycosyl transferase family 2 CY96_05250 PF08241 Methyltransferase domain CY96_05255 PF05711 Macrocin-O-methyltransferase (TylF) CY96_05265 PF00535 Glycosyl transferase family 2 CY96_05265 PF13181 Tetratricopeptide repeat CY96_05285 PF00483 Nucleotidyl transferase CY96_05290 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CY96_05295 PF16363 GDP-mannose 4,6 dehydratase CY96_05300 PF04321 RmlD substrate binding domain CY96_05320 PF07098 Protein of unknown function (DUF1360) CY96_05340 PF00580 UvrD/REP helicase N-terminal domain CY96_05340 PF13361 UvrD-like helicase C-terminal domain CY96_05345 PF13673 Acetyltransferase (GNAT) domain CY96_05355 PF00756 Putative esterase CY96_05370 PF02368 Bacterial Ig-like domain (group 2) CY96_05375 PF00474 Sodium:solute symporter family CY96_05390 PF02885 Glycosyl transferase family, helical bundle domain CY96_05390 PF00117 Glutamine amidotransferase class-I CY96_05390 PF00591 Glycosyl transferase family, a/b domain CY96_05395 PF02885 Glycosyl transferase family, helical bundle domain CY96_05395 PF00591 Glycosyl transferase family, a/b domain CY96_05400 PF00218 Indole-3-glycerol phosphate synthase CY96_05405 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CY96_05410 PF00291 Pyridoxal-phosphate dependent enzyme CY96_05415 PF00290 Tryptophan synthase alpha chain CY96_05425 PF02652 L-lactate permease CY96_05430 PF10042 Uncharacterized conserved protein (DUF2278) CY96_05455 PF07992 Pyridine nucleotide-disulphide oxidoreductase CY96_05455 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CY96_05465 PF00881 Nitroreductase family CY96_05480 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CY96_05480 PF02817 e3 binding domain CY96_05480 PF00364 Biotin-requiring enzyme CY96_05485 PF16870 2-oxoglutarate dehydrogenase C-terminal CY96_05485 PF00676 Dehydrogenase E1 component CY96_05485 PF02779 Transketolase, pyrimidine binding domain CY96_05495 PF01381 Helix-turn-helix CY96_05525 PF13732 Domain of unknown function (DUF4162) CY96_05525 PF00005 ABC transporter CY96_05555 PF07943 Penicillin-binding protein 5, C-terminal domain CY96_05555 PF00768 D-alanyl-D-alanine carboxypeptidase CY96_05565 PF12389 Camelysin metallo-endopeptidase CY96_05575 PF12389 Camelysin metallo-endopeptidase CY96_05580 PF01381 Helix-turn-helix CY96_05580 PF08671 Anti-repressor SinI CY96_05590 PF05547 Immune inhibitor A peptidase M6 CY96_05595 PF00171 Aldehyde dehydrogenase family CY96_05600 PF00005 ABC transporter CY96_05600 PF08402 TOBE domain CY96_05605 PF00528 Binding-protein-dependent transport system inner membrane component CY96_05610 PF00528 Binding-protein-dependent transport system inner membrane component CY96_05615 PF13416 Bacterial extracellular solute-binding protein CY96_05620 PF01569 PAP2 superfamily CY96_05625 PF03176 MMPL family CY96_05635 PF01479 S4 domain CY96_05635 PF00849 RNA pseudouridylate synthase CY96_05645 PF00188 Cysteine-rich secretory protein family CY96_05650 PF13183 4Fe-4S dicluster domain CY96_05650 PF02754 Cysteine-rich domain CY96_05655 PF01565 FAD binding domain CY96_05655 PF02913 FAD linked oxidases, C-terminal domain CY96_05660 PF05651 Putative sugar diacid recognition CY96_05660 PF17853 GGDEF-like domain CY96_05660 PF13556 PucR C-terminal helix-turn-helix domain CY96_05670 PF00486 Transcriptional regulatory protein, C terminal CY96_05670 PF00072 Response regulator receiver domain CY96_05675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_05675 PF00672 HAMP domain CY96_05675 PF00512 His Kinase A (phospho-acceptor) domain CY96_05675 PF00989 PAS fold CY96_05675 PF18698 Histidine kinase sensor domain CY96_05680 PF00392 Bacterial regulatory proteins, gntR family CY96_05680 PF07729 FCD domain CY96_05685 PF02754 Cysteine-rich domain CY96_05690 PF02589 LUD domain CY96_05690 PF11870 Domain of unknown function (DUF3390) CY96_05690 PF13183 4Fe-4S dicluster domain CY96_05695 PF02589 LUD domain CY96_05700 PF01478 Type IV leader peptidase family CY96_05700 PF06750 Bacterial Peptidase A24 N-terminal domain CY96_05710 PF01226 Formate/nitrite transporter CY96_05715 PF03741 Integral membrane protein TerC family CY96_05720 PF02386 Cation transport protein CY96_05725 PF00269 Small, acid-soluble spore proteins, alpha/beta type CY96_05730 PF01575 MaoC like domain CY96_05755 PF00561 alpha/beta hydrolase fold CY96_05765 PF02386 Cation transport protein CY96_05785 PF00005 ABC transporter CY96_05785 PF08402 TOBE domain CY96_05790 PF00528 Binding-protein-dependent transport system inner membrane component CY96_05795 PF13419 Haloacid dehalogenase-like hydrolase CY96_05800 PF00266 Aminotransferase class-V CY96_05810 PF00455 DeoR C terminal sensor domain CY96_05810 PF08220 DeoR-like helix-turn-helix domain CY96_05825 PF00596 Class II Aldolase and Adducin N-terminal domain CY96_05835 PF04748 Divergent polysaccharide deacetylase CY96_05840 PF09388 Spo0E like sporulation regulatory protein CY96_05845 PF02743 Cache domain CY96_05845 PF00512 His Kinase A (phospho-acceptor) domain CY96_05845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_05850 PF01047 MarR family CY96_05860 PF12867 DinB superfamily CY96_05875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_05875 PF00512 His Kinase A (phospho-acceptor) domain CY96_05875 PF13426 PAS domain CY96_05875 PF13188 PAS domain CY96_05875 PF00989 PAS fold CY96_05880 PF06508 Queuosine biosynthesis protein QueC CY96_05885 PF01242 6-pyruvoyl tetrahydropterin synthase CY96_05890 PF04055 Radical SAM superfamily CY96_05895 PF14489 QueF-like protein CY96_05900 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) CY96_05930 PF07972 NrdI Flavodoxin like CY96_05935 PF02867 Ribonucleotide reductase, barrel domain CY96_05935 PF00317 Ribonucleotide reductase, all-alpha domain CY96_05935 PF08343 Ribonucleotide reductase N-terminal CY96_05940 PF00268 Ribonucleotide reductase, small chain CY96_05945 PF00392 Bacterial regulatory proteins, gntR family CY96_05950 PF00005 ABC transporter CY96_05960 PF00005 ABC transporter CY96_05980 PF01037 Lrp/AsnC ligand binding domain CY96_05990 PF00857 Isochorismatase family CY96_06000 PF02016 LD-carboxypeptidase N-terminal domain CY96_06000 PF17676 LD-carboxypeptidase C-terminal domain CY96_06005 PF03060 Nitronate monooxygenase CY96_06010 PF04914 DltD protein CY96_06015 PF00550 Phosphopantetheine attachment site CY96_06020 PF03062 MBOAT, membrane-bound O-acyltransferase family CY96_06025 PF13193 AMP-binding enzyme C-terminal domain CY96_06025 PF00501 AMP-binding enzyme CY96_06035 PF01546 Peptidase family M20/M25/M40 CY96_06035 PF07687 Peptidase dimerisation domain CY96_06045 PF00258 Flavodoxin CY96_06080 PF01554 MatE CY96_06085 PF02673 Bacitracin resistance protein BacA CY96_06105 PF01047 MarR family CY96_06115 PF00375 Sodium:dicarboxylate symporter family CY96_06120 PF02386 Cation transport protein CY96_06130 PF09579 Sporulation protein YtfJ (Spore_YtfJ) CY96_06140 PF03698 Uncharacterised protein family (UPF0180) CY96_06150 PF01063 Amino-transferase class IV CY96_06155 PF00205 Thiamine pyrophosphate enzyme, central domain CY96_06155 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CY96_06155 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CY96_06160 PF10369 Small subunit of acetolactate synthase CY96_06160 PF01842 ACT domain CY96_06165 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CY96_06165 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CY96_06170 PF08502 LeuA allosteric (dimerisation) domain CY96_06170 PF00682 HMGL-like CY96_06175 PF00180 Isocitrate/isopropylmalate dehydrogenase CY96_06180 PF00330 Aconitase family (aconitate hydratase) CY96_06185 PF00694 Aconitase C-terminal domain CY96_06190 PF13393 Histidyl-tRNA synthetase CY96_06195 PF01634 ATP phosphoribosyltransferase CY96_06200 PF00815 Histidinol dehydrogenase CY96_06205 PF00475 Imidazoleglycerol-phosphate dehydratase CY96_06210 PF00117 Glutamine amidotransferase class-I CY96_06215 PF00977 Histidine biosynthesis protein CY96_06220 PF00977 Histidine biosynthesis protein CY96_06225 PF01502 Phosphoribosyl-AMP cyclohydrolase CY96_06230 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CY96_06235 PF02811 PHP domain CY96_06245 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CY96_06245 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CY96_06250 PF01066 CDP-alcohol phosphatidyltransferase CY96_06255 PF00884 Sulfatase CY96_06265 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CY96_06265 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CY96_06275 PF01507 Phosphoadenosine phosphosulfate reductase family CY96_06280 PF01747 ATP-sulfurylase CY96_06280 PF14306 PUA-like domain CY96_06290 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CY96_06290 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CY96_06300 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CY96_06305 PF01903 CbiX CY96_06315 PF00209 Sodium:neurotransmitter symporter family CY96_06330 PF00375 Sodium:dicarboxylate symporter family CY96_06340 PF03553 Na+/H+ antiporter family CY96_06355 PF09922 Cell wall-active antibiotics response 4TMS YvqF CY96_06360 PF07730 Histidine kinase CY96_06360 PF00672 HAMP domain CY96_06360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_06365 PF00196 Bacterial regulatory proteins, luxR family CY96_06365 PF00072 Response regulator receiver domain CY96_06375 PF05525 Branched-chain amino acid transport protein CY96_06385 PF01209 ubiE/COQ5 methyltransferase family CY96_06410 PF00175 Oxidoreductase NAD-binding domain CY96_06410 PF00042 Globin CY96_06410 PF00970 Oxidoreductase FAD-binding domain CY96_06425 PF01925 Sulfite exporter TauE/SafE CY96_06430 PF01384 Phosphate transporter family CY96_06435 PF01865 Protein of unknown function DUF47 CY96_06440 PF00905 Penicillin binding protein transpeptidase domain CY96_06440 PF00912 Transglycosylase CY96_06455 PF00989 PAS fold CY96_06455 PF00512 His Kinase A (phospho-acceptor) domain CY96_06455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_06460 PF01904 Protein of unknown function DUF72 CY96_06475 PF00589 Phage integrase family CY96_06480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_06480 PF00989 PAS fold CY96_06480 PF16736 Single Cache-like CY96_06480 PF00512 His Kinase A (phospho-acceptor) domain CY96_06485 PF01048 Phosphorylase superfamily CY96_06495 PF03706 Lysylphosphatidylglycerol synthase TM region CY96_06495 PF09924 Uncharacterised conserved protein (DUF2156) CY96_06510 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CY96_06510 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CY96_06515 PF00768 D-alanyl-D-alanine carboxypeptidase CY96_06515 PF07943 Penicillin-binding protein 5, C-terminal domain CY96_06520 PF07670 Nucleoside recognition CY96_06525 PF07670 Nucleoside recognition CY96_06530 PF00849 RNA pseudouridylate synthase CY96_06530 PF01479 S4 domain CY96_06535 PF00578 AhpC/TSA family CY96_06540 PF05140 ResB-like family CY96_06545 PF01578 Cytochrome C assembly protein CY96_06550 PF00486 Transcriptional regulatory protein, C terminal CY96_06550 PF00072 Response regulator receiver domain CY96_06555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_06555 PF18698 Histidine kinase sensor domain CY96_06555 PF00989 PAS fold CY96_06555 PF00672 HAMP domain CY96_06555 PF00512 His Kinase A (phospho-acceptor) domain CY96_06560 PF01923 Cobalamin adenosyltransferase CY96_06575 PF12822 ECF transporter, substrate-specific component CY96_06590 PF00270 DEAD/DEAH box helicase CY96_06590 PF00271 Helicase conserved C-terminal domain CY96_06595 PF02517 CPBP intramembrane metalloprotease CY96_06605 PF00149 Calcineurin-like phosphoesterase CY96_06610 PF13411 MerR HTH family regulatory protein CY96_06615 PF05389 Negative regulator of genetic competence (MecA) CY96_06620 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CY96_06620 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CY96_06645 PF17763 Glutaminase/Asparaginase C-terminal domain CY96_06645 PF00710 Asparaginase, N-terminal CY96_06655 PF02224 Cytidylate kinase CY96_06660 PF00575 S1 RNA binding domain CY96_06665 PF01070 FMN-dependent dehydrogenase CY96_06680 PF14045 YIEGIA protein CY96_06690 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CY96_06690 PF01926 50S ribosome-binding GTPase CY96_06695 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CY96_06695 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CY96_06705 PF10966 Protein of unknown function (DUF2768) CY96_06715 PF09547 Stage IV sporulation protein A (spore_IV_A) CY96_06720 PF00216 Bacterial DNA-binding protein CY96_06725 PF01227 GTP cyclohydrolase I CY96_06730 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 CY96_06735 PF01209 ubiE/COQ5 methyltransferase family CY96_06740 PF00348 Polyprenyl synthetase CY96_06745 PF00334 Nucleoside diphosphate kinase CY96_06750 PF01264 Chorismate synthase CY96_06755 PF01761 3-dehydroquinate synthase CY96_06760 PF00155 Aminotransferase class I and II CY96_06770 PF08858 IDEAL domain CY96_06770 PF08864 UPF0302 domain CY96_06775 PF10673 Protein of unknown function (DUF2487) CY96_06780 PF00355 Rieske [2Fe-2S] domain CY96_06785 PF00033 Cytochrome b/b6/petB CY96_06790 PF00032 Cytochrome b(C-terminal)/b6/petD CY96_06790 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CY96_06795 PF07187 Protein of unknown function (DUF1405) CY96_06805 PF09577 Sporulation protein YpjB (SpoYpjB) CY96_06810 PF04298 Putative neutral zinc metallopeptidase CY96_06820 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CY96_06820 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CY96_06825 PF03819 MazG nucleotide pyrophosphohydrolase domain CY96_06830 PF01113 Dihydrodipicolinate reductase, N-terminus CY96_06830 PF05173 Dihydrodipicolinate reductase, C-terminus CY96_06835 PF02142 MGS-like domain CY96_06840 PF02585 GlcNAc-PI de-N-acetylase CY96_06845 PF00534 Glycosyl transferases group 1 CY96_06845 PF13439 Glycosyltransferase Family 4 CY96_06850 PF12627 Probable RNA and SrmB- binding site of polymerase A CY96_06850 PF01743 Poly A polymerase head domain CY96_06850 PF13735 tRNA nucleotidyltransferase domain 2 putative CY96_06855 PF08279 HTH domain CY96_06855 PF03099 Biotin/lipoate A/B protein ligase family CY96_06855 PF02237 Biotin protein ligase C terminal domain CY96_06865 PF02548 Ketopantoate hydroxymethyltransferase CY96_06870 PF02569 Pantoate-beta-alanine ligase CY96_06875 PF02261 Aspartate decarboxylase CY96_06880 PF04851 Type III restriction enzyme, res subunit CY96_06880 PF13307 Helicase C-terminal domain CY96_06880 PF00929 Exonuclease CY96_06895 PF00155 Aminotransferase class I and II CY96_06900 PF07261 Replication initiation and membrane attachment CY96_06905 PF00730 HhH-GPD superfamily base excision DNA repair protein CY96_06905 PF00633 Helix-hairpin-helix motif CY96_06905 PF10576 Iron-sulfur binding domain of endonuclease III CY96_06915 PF00905 Penicillin binding protein transpeptidase domain CY96_06915 PF00912 Transglycosylase CY96_06920 PF03838 Recombination protein U CY96_06925 PF10720 Protein of unknown function (DUF2515) CY96_06960 PF06908 YspA SLOG family CY96_06965 PF05103 DivIVA protein CY96_06970 PF02926 THUMP domain CY96_06970 PF01170 Putative RNA methylase family UPF0020 CY96_06980 PF13307 Helicase C-terminal domain CY96_06985 PF02074 Carboxypeptidase Taq (M32) metallopeptidase CY96_06995 PF00557 Metallopeptidase family M24 CY96_07000 PF00156 Phosphoribosyl transferase domain CY96_07005 PF00860 Permease family CY96_07010 PF04235 Protein of unknown function (DUF418) CY96_07020 PF00350 Dynamin family CY96_07030 PF00583 Acetyltransferase (GNAT) family CY96_07035 PF10752 Protein of unknown function (DUF2533) CY96_07040 PF00581 Rhodanese-like domain CY96_07065 PF00690 Cation transporter/ATPase, N-terminus CY96_07065 PF00689 Cation transporting ATPase, C-terminus CY96_07070 PF01367 5'-3' exonuclease, C-terminal SAM fold CY96_07070 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CY96_07085 PF02706 Chain length determinant protein CY96_07085 PF13807 G-rich domain on putative tyrosine kinase CY96_07095 PF02397 Bacterial sugar transferase CY96_07110 PF00535 Glycosyl transferase family 2 CY96_07115 PF00534 Glycosyl transferases group 1 CY96_07115 PF13439 Glycosyltransferase Family 4 CY96_07130 PF18014 Acetyltransferase (GNAT) domain CY96_07130 PF13673 Acetyltransferase (GNAT) domain CY96_07150 PF13456 Reverse transcriptase-like CY96_07155 PF01263 Aldose 1-epimerase CY96_07180 PF00313 'Cold-shock' DNA-binding domain CY96_07185 PF08892 YqcI/YcgG family CY96_07190 PF01810 LysE type translocator CY96_07210 PF00474 Sodium:solute symporter family CY96_07215 PF00202 Aminotransferase class-III CY96_07225 PF00999 Sodium/hydrogen exchanger family CY96_07230 PF00753 Metallo-beta-lactamase superfamily CY96_07230 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CY96_07230 PF17770 Ribonuclease J C-terminal domain CY96_07235 PF06445 GyrI-like small molecule binding domain CY96_07235 PF13411 MerR HTH family regulatory protein CY96_07245 PF04239 Protein of unknown function (DUF421) CY96_07250 PF02698 DUF218 domain CY96_07260 PF00881 Nitroreductase family CY96_07285 PF17209 Hfq protein CY96_07295 PF01618 MotA/TolQ/ExbB proton channel family CY96_07300 PF00691 OmpA family CY96_07300 PF13677 Membrane MotB of proton-channel complex MotA/MotB CY96_07305 PF00072 Response regulator receiver domain CY96_07310 PF07194 P2 response regulator binding domain CY96_07310 PF01627 Hpt domain CY96_07310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_07310 PF02895 Signal transducing histidine kinase, homodimeric domain CY96_07310 PF01584 CheW-like domain CY96_07315 PF04509 CheC-like family CY96_07315 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CY96_07330 PF03705 CheR methyltransferase, all-alpha domain CY96_07330 PF01739 CheR methyltransferase, SAM binding domain CY96_07350 PF00460 Flagella basal body rod protein CY96_07350 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CY96_07355 PF00700 Bacterial flagellin C-terminal helical region CY96_07355 PF00669 Bacterial flagellin N-terminal helical region CY96_07360 PF07196 Flagellin hook IN motif CY96_07360 PF07195 Flagellar hook-associated protein 2 C-terminus CY96_07360 PF02465 Flagellar hook-associated protein 2 N-terminus CY96_07375 PF00460 Flagella basal body rod protein CY96_07380 PF00460 Flagella basal body rod protein CY96_07380 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CY96_07385 PF02049 Flagellar hook-basal body complex protein FliE CY96_07390 PF01514 Secretory protein of YscJ/FliF family CY96_07390 PF08345 Flagellar M-ring protein C-terminal CY96_07395 PF14842 FliG N-terminal domain CY96_07395 PF01706 FliG C-terminal domain CY96_07395 PF14841 FliG middle domain CY96_07405 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CY96_07405 PF02874 ATP synthase alpha/beta family, beta-barrel domain CY96_07405 PF18269 T3SS EscN ATPase C-terminal domain CY96_07425 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CY96_07425 PF07559 Flagellar basal body protein FlaE CY96_07425 PF00460 Flagella basal body rod protein CY96_07440 PF00072 Response regulator receiver domain CY96_07440 PF01584 CheW-like domain CY96_07445 PF12181 DNA binding domain of the motility gene repressor (MogR) CY96_07450 PF00700 Bacterial flagellin C-terminal helical region CY96_07450 PF00669 Bacterial flagellin N-terminal helical region CY96_07455 PF00700 Bacterial flagellin C-terminal helical region CY96_07455 PF00669 Bacterial flagellin N-terminal helical region CY96_07460 PF01464 Transglycosylase SLT domain CY96_07470 PF02154 Flagellar motor switch protein FliM CY96_07470 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CY96_07475 PF04509 CheC-like family CY96_07475 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CY96_07485 PF00813 FliP family CY96_07490 PF01313 Bacterial export proteins, family 3 CY96_07500 PF01312 FlhB HrpN YscU SpaS Family CY96_07505 PF00771 FHIPEP family CY96_07510 PF00448 SRP54-type protein, GTPase domain CY96_07515 PF00460 Flagella basal body rod protein CY96_07515 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CY96_07520 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CY96_07520 PF02272 DHHA1 domain CY96_07520 PF01411 tRNA synthetases class II (A) CY96_07550 PF03992 Antibiotic biosynthesis monooxygenase CY96_07555 PF08141 Small acid-soluble spore protein H family CY96_07580 PF00005 ABC transporter CY96_07580 PF08402 TOBE domain CY96_07590 PF00528 Binding-protein-dependent transport system inner membrane component CY96_07605 PF10787 Uncharacterised protein from bacillus cereus group CY96_07620 PF00300 Histidine phosphatase superfamily (branch 1) CY96_07630 PF00561 alpha/beta hydrolase fold CY96_07640 PF01047 MarR family CY96_07650 PF00733 Asparagine synthase CY96_07650 PF13537 Glutamine amidotransferase domain CY96_07670 PF01545 Cation efflux family CY96_07670 PF16916 Dimerisation domain of Zinc Transporter CY96_07680 PF00392 Bacterial regulatory proteins, gntR family CY96_07680 PF07729 FCD domain CY96_07685 PF00892 EamA-like transporter family CY96_07695 PF07683 Cobalamin synthesis protein cobW C-terminal domain CY96_07695 PF02492 CobW/HypB/UreG, nucleotide-binding domain CY96_07700 PF03773 Predicted permease CY96_07715 PF03553 Na+/H+ antiporter family CY96_07720 PF13411 MerR HTH family regulatory protein CY96_07730 PF10415 Fumarase C C-terminus CY96_07730 PF00206 Lyase CY96_07750 PF01554 MatE CY96_07755 PF03575 Peptidase family S51 CY96_07775 PF00578 AhpC/TSA family CY96_07780 PF00269 Small, acid-soluble spore proteins, alpha/beta type CY96_07795 PF01022 Bacterial regulatory protein, arsR family CY96_07965 PF04542 Sigma-70 region 2 CY96_07965 PF04545 Sigma-70, region 4 CY96_07965 PF04539 Sigma-70 region 3 CY96_07965 PF00140 Sigma-70 factor, region 1.2 CY96_07965 PF03979 Sigma-70 factor, region 1.1 CY96_08010 PF00085 Thioredoxin CY96_08025 PF09281 Taq polymerase, exonuclease CY96_08025 PF00476 DNA polymerase family A CY96_08025 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CY96_08025 PF01367 5'-3' exonuclease, C-terminal SAM fold CY96_08030 PF00476 DNA polymerase family A CY96_08030 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CY96_08030 PF01367 5'-3' exonuclease, C-terminal SAM fold CY96_08035 PF00476 DNA polymerase family A CY96_08035 PF01367 5'-3' exonuclease, C-terminal SAM fold CY96_08035 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CY96_08035 PF01612 3'-5' exonuclease CY96_08060 PF07319 Primosomal protein DnaI N-terminus CY96_08060 PF01695 IstB-like ATP binding protein CY96_08085 PF13276 HTH-like domain CY96_08085 PF00665 Integrase core domain CY96_08085 PF13333 Integrase core domain CY96_08105 PF00291 Pyridoxal-phosphate dependent enzyme CY96_08110 PF04286 Protein of unknown function (DUF445) CY96_08135 PF00072 Response regulator receiver domain CY96_08135 PF00196 Bacterial regulatory proteins, luxR family CY96_08140 PF13185 GAF domain CY96_08140 PF13492 GAF domain CY96_08140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_08140 PF07730 Histidine kinase CY96_08145 PF00005 ABC transporter CY96_08165 PF13091 PLD-like domain CY96_08170 PF00696 Amino acid kinase family CY96_08175 PF00375 Sodium:dicarboxylate symporter family CY96_08180 PF10415 Fumarase C C-terminus CY96_08180 PF00206 Lyase CY96_08185 PF03949 Malic enzyme, NAD binding domain CY96_08185 PF00390 Malic enzyme, N-terminal domain CY96_08190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_08195 PF00072 Response regulator receiver domain CY96_08195 PF08664 YcbB domain CY96_08205 PF00271 Helicase conserved C-terminal domain CY96_08205 PF00176 SNF2 family N-terminal domain CY96_08205 PF04434 SWIM zinc finger CY96_08220 PF03590 Aspartate-ammonia ligase CY96_08230 PF00696 Amino acid kinase family CY96_08230 PF13840 ACT domain CY96_08245 PF14158 YndJ-like protein CY96_08250 PF00293 NUDIX domain CY96_08250 PF09297 NADH pyrophosphatase zinc ribbon domain CY96_08255 PF07690 Major Facilitator Superfamily CY96_08265 PF03976 Polyphosphate kinase 2 (PPK2) CY96_08270 PF10400 Virulence activator alpha C-term CY96_08270 PF03551 Transcriptional regulator PadR-like family CY96_08275 PF07690 Major Facilitator Superfamily CY96_08280 PF07690 Major Facilitator Superfamily CY96_08285 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CY96_08285 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CY96_08290 PF16360 GTP-binding GTPase Middle Region CY96_08290 PF13167 GTP-binding GTPase N-terminal CY96_08290 PF01926 50S ribosome-binding GTPase CY96_08295 PF07690 Major Facilitator Superfamily CY96_08300 PF00291 Pyridoxal-phosphate dependent enzyme CY96_08320 PF00209 Sodium:neurotransmitter symporter family CY96_08325 PF01522 Polysaccharide deacetylase CY96_08325 PF00457 Glycosyl hydrolases family 11 CY96_08325 PF03422 Carbohydrate binding module (family 6) CY96_08340 PF04239 Protein of unknown function (DUF421) CY96_08365 PF01625 Peptide methionine sulfoxide reductase CY96_08375 PF01063 Amino-transferase class IV CY96_08380 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CY96_08380 PF00205 Thiamine pyrophosphate enzyme, central domain CY96_08380 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CY96_08390 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CY96_08390 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CY96_08395 PF00920 Dehydratase family CY96_08400 PF00291 Pyridoxal-phosphate dependent enzyme CY96_08400 PF00585 C-terminal regulatory domain of Threonine dehydratase CY96_08405 PF09587 Bacterial capsule synthesis protein PGA_cap CY96_08420 PF07690 Major Facilitator Superfamily CY96_08425 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CY96_08435 PF00072 Response regulator receiver domain CY96_08435 PF04397 LytTr DNA-binding domain CY96_08440 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CY96_08440 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CY96_08445 PF13673 Acetyltransferase (GNAT) domain CY96_08455 PF01979 Amidohydrolase family CY96_08460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CY96_08465 PF13302 Acetyltransferase (GNAT) domain CY96_08470 PF00072 Response regulator receiver domain CY96_08470 PF00486 Transcriptional regulatory protein, C terminal CY96_08475 PF00512 His Kinase A (phospho-acceptor) domain CY96_08475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_08485 PF01566 Natural resistance-associated macrophage protein CY96_08500 PF08546 Ketopantoate reductase PanE/ApbA C terminal CY96_08500 PF02558 Ketopantoate reductase PanE/ApbA CY96_08510 PF13520 Amino acid permease CY96_08520 PF05791 Bacillus haemolytic enterotoxin (HBL) CY96_08525 PF05791 Bacillus haemolytic enterotoxin (HBL) CY96_08535 PF01906 Putative heavy-metal-binding CY96_08545 PF00440 Bacterial regulatory proteins, tetR family CY96_08550 PF04198 Putative sugar-binding domain CY96_08555 PF01791 DeoC/LacD family aldolase CY96_08560 PF01773 Na+ dependent nucleoside transporter N-terminus CY96_08560 PF07662 Na+ dependent nucleoside transporter C-terminus CY96_08565 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CY96_08565 PF02885 Glycosyl transferase family, helical bundle domain CY96_08565 PF00591 Glycosyl transferase family, a/b domain CY96_08570 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CY96_08580 PF07301 Protein of unknown function (DUF1453) CY96_08585 PF05979 Bacterial protein of unknown function (DUF896) CY96_08605 PF05195 Aminopeptidase P, N-terminal domain CY96_08605 PF00557 Metallopeptidase family M24 CY96_08615 PF00394 Multicopper oxidase CY96_08615 PF07732 Multicopper oxidase CY96_08615 PF07731 Multicopper oxidase CY96_08640 PF02525 Flavodoxin-like fold CY96_08645 PF05525 Branched-chain amino acid transport protein CY96_08655 PF04234 CopC domain CY96_08655 PF05425 Copper resistance protein D CY96_08655 PF13115 YtkA-like CY96_08660 PF07987 Domain of unkown function (DUF1775) CY96_08665 PF00892 EamA-like transporter family CY96_08670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CY96_08670 PF03466 LysR substrate binding domain CY96_08675 PF02082 Transcriptional regulator CY96_08680 PF01323 DSBA-like thioredoxin domain CY96_08685 PF00881 Nitroreductase family CY96_08695 PF01425 Amidase CY96_08700 PF01594 AI-2E family transporter CY96_08705 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CY96_08705 PF00056 lactate/malate dehydrogenase, NAD binding domain CY96_08710 PF01593 Flavin containing amine oxidoreductase CY96_08715 PF07683 Cobalamin synthesis protein cobW C-terminal domain CY96_08715 PF02492 CobW/HypB/UreG, nucleotide-binding domain CY96_08725 PF12399 Branched-chain amino acid ATP-binding cassette transporter CY96_08725 PF00005 ABC transporter CY96_08730 PF00005 ABC transporter CY96_08735 PF02653 Branched-chain amino acid transport system / permease component CY96_08745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CY96_08745 PF03466 LysR substrate binding domain CY96_08765 PF01047 MarR family CY96_08780 PF01654 Cytochrome bd terminal oxidase subunit I CY96_08785 PF02322 Cytochrome bd terminal oxidase subunit II CY96_08790 PF00005 ABC transporter CY96_08790 PF00664 ABC transporter transmembrane region CY96_08795 PF00005 ABC transporter CY96_08795 PF00664 ABC transporter transmembrane region CY96_08805 PF00535 Glycosyl transferase family 2 CY96_08810 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CY96_08815 PF00132 Bacterial transferase hexapeptide (six repeats) CY96_08840 PF02016 LD-carboxypeptidase N-terminal domain CY96_08840 PF17676 LD-carboxypeptidase C-terminal domain CY96_08845 PF00768 D-alanyl-D-alanine carboxypeptidase CY96_08845 PF07943 Penicillin-binding protein 5, C-terminal domain CY96_08865 PF00877 NlpC/P60 family CY96_08865 PF01476 LysM domain CY96_08875 PF00664 ABC transporter transmembrane region CY96_08875 PF00005 ABC transporter CY96_08880 PF00486 Transcriptional regulatory protein, C terminal CY96_08880 PF00072 Response regulator receiver domain CY96_08885 PF00512 His Kinase A (phospho-acceptor) domain CY96_08885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_08885 PF16736 Single Cache-like CY96_08885 PF00989 PAS fold CY96_08890 PF00106 short chain dehydrogenase CY96_08895 PF04439 Streptomycin adenylyltransferase CY96_08900 PF01522 Polysaccharide deacetylase CY96_08900 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain CY96_08920 PF03447 Homoserine dehydrogenase, NAD binding domain CY96_08920 PF00742 Homoserine dehydrogenase CY96_08920 PF01842 ACT domain CY96_08925 PF00291 Pyridoxal-phosphate dependent enzyme CY96_08930 PF00288 GHMP kinases N terminal domain CY96_08930 PF08544 GHMP kinases C terminal CY96_08945 PF03816 Cell envelope-related transcriptional attenuator domain CY96_08955 PF00486 Transcriptional regulatory protein, C terminal CY96_08955 PF00072 Response regulator receiver domain CY96_08960 PF00989 PAS fold CY96_08960 PF16736 Single Cache-like CY96_08960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_08960 PF00512 His Kinase A (phospho-acceptor) domain CY96_08965 PF01522 Polysaccharide deacetylase CY96_08975 PF02308 MgtC family CY96_08980 PF00583 Acetyltransferase (GNAT) family CY96_08985 PF04183 IucA / IucC family CY96_08985 PF06276 Ferric iron reductase FhuF-like transporter CY96_08990 PF04183 IucA / IucC family CY96_08990 PF06276 Ferric iron reductase FhuF-like transporter CY96_08995 PF13193 AMP-binding enzyme C-terminal domain CY96_08995 PF00501 AMP-binding enzyme CY96_09010 PF01261 Xylose isomerase-like TIM barrel CY96_09015 PF00269 Small, acid-soluble spore proteins, alpha/beta type CY96_09020 PF07690 Major Facilitator Superfamily CY96_09025 PF01810 LysE type translocator CY96_09030 PF00155 Aminotransferase class I and II CY96_09030 PF00392 Bacterial regulatory proteins, gntR family CY96_09040 PF01734 Patatin-like phospholipase CY96_09065 PF00293 NUDIX domain CY96_09065 PF13344 Haloacid dehalogenase-like hydrolase CY96_09070 PF02540 NAD synthase CY96_09075 PF02687 FtsX-like permease family CY96_09080 PF18277 AbrB C-terminal domain CY96_09080 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CY96_09085 PF00082 Subtilase family CY96_09115 PF03193 RsgA GTPase CY96_09120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CY96_09120 PF00672 HAMP domain CY96_09120 PF02743 Cache domain CY96_09140 PF00210 Ferritin-like domain CY96_09155 PF00296 Luciferase-like monooxygenase CY96_09165 PF01593 Flavin containing amine oxidoreductase CY96_09170 PF13302 Acetyltransferase (GNAT) domain CY96_09175 PF00248 Aldo/keto reductase family CY96_09180 PF07683 Cobalamin synthesis protein cobW C-terminal domain CY96_09180 PF02492 CobW/HypB/UreG, nucleotide-binding domain CY96_09185 PF00583 Acetyltransferase (GNAT) family CY96_09190 PF01297 Zinc-uptake complex component A periplasmic CY96_09200 PF13460 NAD(P)H-binding CY96_09205 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CY96_09210 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CY96_09210 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CY96_09220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CY96_09225 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CY96_09235 PF00300 Histidine phosphatase superfamily (branch 1) CY96_09245 PF08757 CotH kinase protein CY96_09250 PF00293 NUDIX domain CY96_09255 PF09335 SNARE associated Golgi protein CY96_09260 PF01943 Polysaccharide biosynthesis protein CY96_09260 PF14667 Polysaccharide biosynthesis C-terminal domain CY96_09270 PF03773 Predicted permease CY96_09275 PF09323 Domain of unknown function (DUF1980) CY96_09280 PF03061 Thioesterase superfamily CY96_09290 PF13396 Phospholipase_D-nuclease N-terminal CY96_09290 PF13091 PLD-like domain CY96_09305 PF13460 NAD(P)H-binding CY96_09310 PF04306 Protein of unknown function (DUF456) CY96_09315 PF03471 Transporter associated domain CY96_09315 PF00571 CBS domain CY96_09315 PF01595 Cyclin M transmembrane N-terminal domain CY96_09330 PF05525 Branched-chain amino acid transport protein CY96_09335 PF01588 Putative tRNA binding domain CY96_09350 PF07454 Stage II sporulation protein P (SpoIIP) CY96_09360 PF02557 D-alanyl-D-alanine carboxypeptidase CY96_09370 PF01425 Amidase CY96_09375 PF07690 Major Facilitator Superfamily CY96_09385 PF01145 SPFH domain / Band 7 family CY96_09390 PF07454 Stage II sporulation protein P (SpoIIP) CY96_09395 PF00300 Histidine phosphatase superfamily (branch 1) CY96_09415 PF00842 Alanine racemase, C-terminal domain CY96_09415 PF01168 Alanine racemase, N-terminal domain CY96_09425 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase CY96_09430 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CY96_09430 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CY96_09435 PF00155 Aminotransferase class I and II CY96_09435 PF00392 Bacterial regulatory proteins, gntR family CY96_09465 PF00583 Acetyltransferase (GNAT) family CY96_09480 PF06013 Proteins of 100 residues with WXG CY96_09495 PF08817 WXG100 protein secretion system (Wss), protein YukD CY96_09500 PF10140 WXG100 protein secretion system (Wss), protein YukC CY96_09505 PF01580 FtsK/SpoIIIE family CY96_09505 PF12538 DNA transporter CY96_09595 PF01385 Probable transposase CY96_09595 PF12323 Helix-turn-helix domain CY96_09595 PF07282 Putative transposase DNA-binding domain CY96_09605 PF09579 Sporulation protein YtfJ (Spore_YtfJ) CY96_09630 PF01209 ubiE/COQ5 methyltransferase family CY96_09635 PF01268 Formate--tetrahydrofolate ligase CY96_09645 PF00270 DEAD/DEAH box helicase CY96_09645 PF00271 Helicase conserved C-terminal domain CY96_09650 PF01261 Xylose isomerase-like TIM barrel CY96_09655 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CY96_09665 PF00107 Zinc-binding dehydrogenase CY96_09665 PF08240 Alcohol dehydrogenase GroES-like domain CY96_09670 PF04542 Sigma-70 region 2 CY96_09670 PF08281 Sigma-70, region 4 CY96_09695 PF00255 Glutathione peroxidase CY96_09700 PF13559 Domain of unknown function (DUF4129) CY96_09700 PF01841 Transglutaminase-like superfamily CY96_09700 PF11992 Domain of unknown function (DUF3488) CY96_09705 PF01882 Protein of unknown function DUF58 CY96_09710 PF17863 AAA lid domain CY96_09710 PF07726 ATPase family associated with various cellular activities (AAA) CY96_09725 PF14710 Respiratory nitrate reductase alpha N-terminal CY96_09725 PF01568 Molydopterin dinucleotide binding domain CY96_09725 PF00384 Molybdopterin oxidoreductase CY96_09730 PF14711 Respiratory nitrate reductase beta C-terminal CY96_09730 PF13247 4Fe-4S dicluster domain CY96_09735 PF02613 Nitrate reductase delta subunit CY96_09740 PF02665 Nitrate reductase gamma subunit CY96_09745 PF00325 Bacterial regulatory proteins, crp family CY96_09745 PF00027 Cyclic nucleotide-binding domain CY96_09750 PF04055 Radical SAM superfamily CY96_09750 PF06463 Molybdenum Cofactor Synthesis C CY96_09755 PF00899 ThiF family CY96_09760 PF03454 MoeA C-terminal region (domain IV) CY96_09760 PF00994 Probable molybdopterin binding domain CY96_09760 PF03453 MoeA N-terminal region (domain I and II) CY96_09765 PF02391 MoaE protein CY96_09770 PF02597 ThiS family CY96_09775 PF07690 Major Facilitator Superfamily CY96_09795 PF01903 CbiX CY96_09800 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CY96_09805 PF00355 Rieske [2Fe-2S] domain CY96_09810 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CY96_09810 PF18267 Rubredoxin NAD+ reductase C-terminal domain CY96_09810 PF07992 Pyridine nucleotide-disulphide oxidoreductase CY96_09810 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CY96_09810 PF04324 BFD-like [2Fe-2S] binding domain CY96_09815 PF04405 Domain of Unknown function (DUF542) CY96_09815 PF01814 Hemerythrin HHE cation binding domain CY96_09850 PF04232 Stage V sporulation protein S (SpoVS) CY96_09870 PF18801 response regulator aspartate phosphatase H, N terminal CY96_09870 PF17874 MalT-like TPR region CY96_09885 PF01966 HD domain CY96_09890 PF12848 ABC transporter CY96_09890 PF16326 ABC transporter C-terminal domain CY96_09890 PF00005 ABC transporter CY96_09905 PF00436 Single-strand binding protein family CY96_09920 PF08712 Scaffold protein Nfu/NifU N terminal CY96_09920 PF13769 Virulence factor CY96_09930 PF06491 Disulphide isomerase CY96_09935 PF04445 Putative SAM-dependent methyltransferase CY96_09940 PF00750 tRNA synthetases class I (R) CY96_09940 PF03485 Arginyl tRNA synthetase N terminal domain CY96_09940 PF05746 DALR anticodon binding domain CY96_09960 PF08264 Anticodon-binding domain of tRNA CY96_09960 PF00133 tRNA synthetases class I (I, L, M and V) CY96_09975 PF01336 OB-fold nucleic acid binding domain CY96_09975 PF00152 tRNA synthetases class II (D, K and N) CY96_09980 PF00209 Sodium:neurotransmitter symporter family CY96_09995 PF10997 Alternate to MurJ CY96_10000 PF13419 Haloacid dehalogenase-like hydrolase CY96_10010 PF00465 Iron-containing alcohol dehydrogenase CY96_10015 PF01177 Asp/Glu/Hydantoin racemase CY96_10020 PF01980 tRNA-methyltransferase O CY96_10025 PF00583 Acetyltransferase (GNAT) family CY96_10030 PF11188 Protein of unknown function (DUF2975) CY96_10035 PF13443 Cro/C1-type HTH DNA-binding domain CY96_10040 PF08645 Polynucleotide kinase 3 phosphatase CY96_10050 PF00005 ABC transporter CY96_10055 PF05975 Bacterial ABC transporter protein EcsB CY96_10060 PF14005 YpjP-like protein CY96_10065 PF13419 Haloacid dehalogenase-like hydrolase CY96_10080 PF07930 D-aminopeptidase, domain B CY96_10080 PF00144 Beta-lactamase CY96_10085 PF00303 Thymidylate synthase CY96_10090 PF00186 Dihydrofolate reductase CY96_10095 PF00905 Penicillin binding protein transpeptidase domain CY96_10095 PF05223 NTF2-like N-terminal transpeptidase domain CY96_10095 PF03717 Penicillin-binding Protein dimerisation domain CY96_10100 PF02525 Flavodoxin-like fold CY96_10105 PF01553 Acyltransferase CY96_10110 PF03006 Haemolysin-III related CY96_10115 PF02416 mttA/Hcf106 family CY96_10120 PF00902 Sec-independent protein translocase protein (TatC) CY96_10130 PF02645 Uncharacterised protein, DegV family COG1307 CY96_10140 PF02630 SCO1/SenC CY96_10145 PF00011 Hsp20/alpha crystallin family CY96_10150 PF13537 Glutamine amidotransferase domain CY96_10150 PF00733 Asparagine synthase CY96_10165 PF05036 Sporulation related domain CY96_10165 PF01520 N-acetylmuramoyl-L-alanine amidase CY96_10170 PF01497 Periplasmic binding protein CY96_10175 PF01063 Amino-transferase class IV CY96_10180 PF00881 Nitroreductase family CY96_10195 PF00857 Isochorismatase family CY96_10200 PF00011 Hsp20/alpha crystallin family CY96_10205 PF00924 Mechanosensitive ion channel CY96_10210 PF13185 GAF domain CY96_10210 PF07730 Histidine kinase CY96_10215 PF00196 Bacterial regulatory proteins, luxR family CY96_10215 PF00072 Response regulator receiver domain CY96_10220 PF01418 Helix-turn-helix domain, rpiR family CY96_10220 PF01380 SIS domain CY96_10225 PF02567 Phenazine biosynthesis-like protein CY96_10230 PF00107 Zinc-binding dehydrogenase CY96_10230 PF08240 Alcohol dehydrogenase GroES-like domain CY96_10245 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CY96_10245 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CY96_10250 PF02447 GntP family permease CY96_10255 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CY96_10255 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CY96_10270 PF03358 NADPH-dependent FMN reductase CY96_10285 PF00571 CBS domain CY96_10285 PF00005 ABC transporter CY96_10290 PF00528 Binding-protein-dependent transport system inner membrane component CY96_10295 PF13520 Amino acid permease CY96_10325 PF01595 Cyclin M transmembrane N-terminal domain CY96_10325 PF00571 CBS domain CY96_10325 PF03471 Transporter associated domain CY96_10330 PF00171 Aldehyde dehydrogenase family CY96_10335 PF07997 Protein of unknown function (DUF1694) CY96_10340 PF09385 Histidine kinase N terminal CY96_10350 PF00202 Aminotransferase class-III CY96_10355 PF01144 Coenzyme A transferase CY96_10360 PF01144 Coenzyme A transferase CY96_10365 PF07687 Peptidase dimerisation domain CY96_10365 PF01546 Peptidase family M20/M25/M40 CY96_10370 PF00583 Acetyltransferase (GNAT) family CY96_10375 PF00158 Sigma-54 interaction domain CY96_10375 PF13426 PAS domain CY96_10375 PF02954 Bacterial regulatory protein, Fis family CY96_10380 PF12544 Lysine-2,3-aminomutase CY96_10385 PF14122 YokU-like protein, putative antitoxin CY96_10390 PF06855 YozE SAM-like fold CY96_10405 PF14162 YozD-like protein CY96_10415 PF08239 Bacterial SH3 domain CY96_10415 PF00069 Protein kinase domain CY96_10425 PF01569 PAP2 superfamily CY96_10430 PF01545 Cation efflux family CY96_10430 PF16916 Dimerisation domain of Zinc Transporter CY96_10440 PF00085 Thioredoxin CY96_10500 PF10676 Spore germination protein gerPA/gerPF CY96_10515 PF00106 short chain dehydrogenase CY96_10535 PF00905 Penicillin binding protein transpeptidase domain CY96_10535 PF00912 Transglycosylase CY96_10545 PF07690 Major Facilitator Superfamily CY96_10550 PF01521 Iron-sulphur cluster biosynthesis CY96_10555 PF00285 Citrate synthase, C-terminal domain CY96_10560 PF03972 MmgE/PrpD family CY96_10570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CY96_10570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CY96_10570 PF02770 Acyl-CoA dehydrogenase, middle domain CY96_10575 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CY96_10575 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CY96_10580 PF00171 Aldehyde dehydrogenase family CY96_10585 PF01810 LysE type translocator CY96_10590 PF00378 Enoyl-CoA hydratase/isomerase CY96_10605 PF00149 Calcineurin-like phosphoesterase CY96_10605 PF12320 Type 5 capsule protein repressor C-terminal domain CY96_10610 PF13476 AAA domain CY96_10620 PF01022 Bacterial regulatory protein, arsR family CY96_10630 PF07690 Major Facilitator Superfamily CY96_10635 PF00106 short chain dehydrogenase CY96_10640 PF00425 chorismate binding enzyme CY96_10645 PF00501 AMP-binding enzyme CY96_10645 PF13193 AMP-binding enzyme C-terminal domain CY96_10650 PF00857 Isochorismatase family CY96_10650 PF00550 Phosphopantetheine attachment site CY96_10655 PF00668 Condensation domain CY96_10655 PF13193 AMP-binding enzyme C-terminal domain CY96_10655 PF00501 AMP-binding enzyme CY96_10655 PF00975 Thioesterase domain CY96_10655 PF00550 Phosphopantetheine attachment site CY96_10660 PF03621 MbtH-like protein CY96_10665 PF07690 Major Facilitator Superfamily CY96_10680 PF00216 Bacterial DNA-binding protein CY96_10690 PF05163 DinB family CY96_10695 PF00082 Subtilase family CY96_10700 PF01235 Sodium:alanine symporter family CY96_10715 PF16291 Domain of unknown function (DUF4937 CY96_10720 PF00849 RNA pseudouridylate synthase CY96_10720 PF01479 S4 domain CY96_10725 PF02824 TGS domain CY96_10725 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CY96_10725 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CY96_10725 PF03129 Anticodon binding domain CY96_10730 PF00005 ABC transporter CY96_10740 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CY96_10740 PF00205 Thiamine pyrophosphate enzyme, central domain CY96_10740 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CY96_10775 PF00027 Cyclic nucleotide-binding domain CY96_10790 PF16123 Hydroxyacylglutathione hydrolase C-terminus CY96_10790 PF00753 Metallo-beta-lactamase superfamily CY96_10800 PF03176 MMPL family CY96_10810 PF00302 Chloramphenicol acetyltransferase CY96_10825 PF00583 Acetyltransferase (GNAT) family CY96_10860 PF13302 Acetyltransferase (GNAT) domain CY96_10870 PF00313 'Cold-shock' DNA-binding domain CY96_10890 PF03466 LysR substrate binding domain CY96_10890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CY96_10895 PF02774 Semialdehyde dehydrogenase, dimerisation domain CY96_10895 PF01118 Semialdehyde dehydrogenase, NAD binding domain CY96_10915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CY96_10915 PF03466 LysR substrate binding domain CY96_10920 PF03475 3-alpha domain CY96_10920 PF03473 MOSC domain CY96_10935 PF00005 ABC transporter CY96_10935 PF00664 ABC transporter transmembrane region CY96_10940 PF00005 ABC transporter CY96_10940 PF00664 ABC transporter transmembrane region CY96_11000 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CY96_11000 PF07992 Pyridine nucleotide-disulphide oxidoreductase CY96_11005 PF04542 Sigma-70 region 2 CY96_11005 PF12680 SnoaL-like domain CY96_11005 PF08281 Sigma-70, region 4 CY96_11030 PF02638 Glycosyl hydrolase-like 10 CY96_11040 PF02378 Phosphotransferase system, EIIC CY96_11050 PF03702 Anhydro-N-acetylmuramic acid kinase CY96_11055 PF01869 BadF/BadG/BcrA/BcrD ATPase family CY96_11060 PF02660 Glycerol-3-phosphate acyltransferase CY96_11065 PF00266 Aminotransferase class-V CY96_11070 PF00291 Pyridoxal-phosphate dependent enzyme CY96_11075 PF01047 MarR family CY96_11080 PF07690 Major Facilitator Superfamily CY96_11090 PF00753 Metallo-beta-lactamase superfamily CY96_11090 PF16123 Hydroxyacylglutathione hydrolase C-terminus CY96_11095 PF00271 Helicase conserved C-terminal domain CY96_11095 PF00270 DEAD/DEAH box helicase CY96_11120 PF00440 Bacterial regulatory proteins, tetR family CY96_11120 PF17932 Tetracyclin repressor-like, C-terminal domain CY96_11150 PF09313 Domain of unknown function (DUF1971) CY96_11150 PF03848 Tellurite resistance protein TehB CY96_11160 PF08241 Methyltransferase domain CY96_11165 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CY96_11165 PF00205 Thiamine pyrophosphate enzyme, central domain CY96_11165 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CY96_11170 PF01047 MarR family CY96_11175 PF00300 Histidine phosphatase superfamily (branch 1) CY96_11180 PF14171 Toxin SpoIISA, type II toxin-antitoxin system CY96_11200 PF01546 Peptidase family M20/M25/M40 CY96_11200 PF07687 Peptidase dimerisation domain CY96_11215 PF00196 Bacterial regulatory proteins, luxR family CY96_11215 PF00072 Response regulator receiver domain CY96_11225 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CY96_11225 PF18277 AbrB C-terminal domain CY96_11235 PF01925 Sulfite exporter TauE/SafE CY96_11240 PF00132 Bacterial transferase hexapeptide (six repeats) CY96_11245 PF07943 Penicillin-binding protein 5, C-terminal domain CY96_11245 PF00768 D-alanyl-D-alanine carboxypeptidase CY96_11255 PF07690 Major Facilitator Superfamily CY96_11260 PF00550 Phosphopantetheine attachment site CY96_11260 PF00501 AMP-binding enzyme CY96_11260 PF00668 Condensation domain CY96_11260 PF13193 AMP-binding enzyme C-terminal domain CY96_11265 PF00550 Phosphopantetheine attachment site CY96_11265 PF00668 Condensation domain CY96_11265 PF07993 Male sterility protein CY96_11265 PF00501 AMP-binding enzyme CY96_11265 PF13193 AMP-binding enzyme C-terminal domain CY96_11270 PF00668 Condensation domain CY96_11270 PF13193 AMP-binding enzyme C-terminal domain CY96_11270 PF00550 Phosphopantetheine attachment site CY96_11270 PF00501 AMP-binding enzyme CY96_11275 PF01648 4'-phosphopantetheinyl transferase superfamily CY96_11280 PF00975 Thioesterase domain CY96_11295 PF05139 Erythromycin esterase CY96_11305 PF13302 Acetyltransferase (GNAT) domain CY96_11320 PF01520 N-acetylmuramoyl-L-alanine amidase CY96_11320 PF00395 S-layer homology domain CY96_11335 PF00027 Cyclic nucleotide-binding domain CY96_11335 PF01734 Patatin-like phospholipase CY96_11350 PF01842 ACT domain CY96_11350 PF03315 Serine dehydratase beta chain CY96_11355 PF03313 Serine dehydratase alpha chain CY96_11385 PF05504 Spore germination B3/ GerAC like, C-terminal CY96_11395 PF00355 Rieske [2Fe-2S] domain CY96_11400 PF01098 Cell cycle protein CY96_11405 PF03448 MgtE intracellular N domain CY96_11405 PF01769 Divalent cation transporter CY96_11405 PF00571 CBS domain CY96_11415 PF03717 Penicillin-binding Protein dimerisation domain CY96_11415 PF00905 Penicillin binding protein transpeptidase domain CY96_11415 PF05223 NTF2-like N-terminal transpeptidase domain CY96_11420 PF04542 Sigma-70 region 2 CY96_11420 PF08281 Sigma-70, region 4 CY96_11430 PF03717 Penicillin-binding Protein dimerisation domain CY96_11430 PF00905 Penicillin binding protein transpeptidase domain CY96_11445 PF00149 Calcineurin-like phosphoesterase CY96_11455 PF00005 ABC transporter CY96_11465 PF08359 YsiA-like protein, C-terminal region CY96_11465 PF00440 Bacterial regulatory proteins, tetR family CY96_11480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CY96_11480 PF02770 Acyl-CoA dehydrogenase, middle domain CY96_11480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CY96_11485 PF02785 Biotin carboxylase C-terminal domain CY96_11485 PF00289 Biotin carboxylase, N-terminal domain CY96_11485 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CY96_11490 PF00364 Biotin-requiring enzyme CY96_11495 PF00682 HMGL-like CY96_11500 PF00378 Enoyl-CoA hydratase/isomerase CY96_11505 PF01039 Carboxyl transferase domain CY96_11510 PF00501 AMP-binding enzyme CY96_11510 PF16177 Acetyl-coenzyme A synthetase N-terminus CY96_11510 PF13193 AMP-binding enzyme C-terminal domain CY96_11530 PF00485 Phosphoribulokinase / Uridine kinase family CY96_11540 PF05163 DinB family CY96_11550 PF00768 D-alanyl-D-alanine carboxypeptidase CY96_11550 PF07943 Penicillin-binding protein 5, C-terminal domain CY96_11555 PF00512 His Kinase A (phospho-acceptor) domain CY96_11555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_11560 PF00486 Transcriptional regulatory protein, C terminal CY96_11560 PF00072 Response regulator receiver domain CY96_11565 PF01966 HD domain CY96_11570 PF01048 Phosphorylase superfamily CY96_11585 PF03413 Peptidase propeptide and YPEB domain CY96_11585 PF07504 Fungalysin/Thermolysin Propeptide Motif CY96_11585 PF02868 Thermolysin metallopeptidase, alpha-helical domain CY96_11585 PF01447 Thermolysin metallopeptidase, catalytic domain CY96_11590 PF17853 GGDEF-like domain CY96_11590 PF12833 Helix-turn-helix domain CY96_11620 PF17760 UvrA interaction domain CY96_11620 PF00005 ABC transporter CY96_11620 PF17755 UvrA DNA-binding domain CY96_11640 PF00376 MerR family regulatory protein CY96_11640 PF09278 MerR, DNA binding CY96_11645 PF07690 Major Facilitator Superfamily CY96_11650 PF13847 Methyltransferase domain CY96_11690 PF00392 Bacterial regulatory proteins, gntR family CY96_11690 PF00155 Aminotransferase class I and II CY96_11695 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal CY96_11695 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal CY96_11705 PF00107 Zinc-binding dehydrogenase CY96_11705 PF08240 Alcohol dehydrogenase GroES-like domain CY96_11715 PF04239 Protein of unknown function (DUF421) CY96_11730 PF08450 SMP-30/Gluconolactonase/LRE-like region CY96_11745 PF07486 Cell Wall Hydrolase CY96_11755 PF00486 Transcriptional regulatory protein, C terminal CY96_11755 PF00072 Response regulator receiver domain CY96_11760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_11775 PF00005 ABC transporter CY96_11780 PF02687 FtsX-like permease family CY96_11800 PF03447 Homoserine dehydrogenase, NAD binding domain CY96_11800 PF00742 Homoserine dehydrogenase CY96_11800 PF01842 ACT domain CY96_11805 PF00155 Aminotransferase class I and II CY96_11805 PF00392 Bacterial regulatory proteins, gntR family CY96_11810 PF01820 D-ala D-ala ligase N-terminus CY96_11810 PF07478 D-ala D-ala ligase C-terminus CY96_11815 PF03070 TENA/THI-4/PQQC family CY96_11885 PF00067 Cytochrome P450 CY96_11895 PF00132 Bacterial transferase hexapeptide (six repeats) CY96_11910 PF00067 Cytochrome P450 CY96_11925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_11925 PF13188 PAS domain CY96_11925 PF00989 PAS fold CY96_11925 PF00512 His Kinase A (phospho-acceptor) domain CY96_11925 PF13426 PAS domain CY96_11935 PF10502 Signal peptidase, peptidase S26 CY96_11940 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase CY96_11945 PF01177 Asp/Glu/Hydantoin racemase CY96_11950 PF07155 ECF-type riboflavin transporter, S component CY96_11955 PF00005 ABC transporter CY96_11955 PF12558 ATP-binding cassette cobalt transporter CY96_11970 PF00512 His Kinase A (phospho-acceptor) domain CY96_11970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_11975 PF14659 Phage integrase, N-terminal SAM-like domain CY96_11975 PF00589 Phage integrase family CY96_12000 PF10676 Spore germination protein gerPA/gerPF CY96_12040 PF00486 Transcriptional regulatory protein, C terminal CY96_12040 PF00072 Response regulator receiver domain CY96_12045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_12045 PF00512 His Kinase A (phospho-acceptor) domain CY96_12045 PF18719 ArlS sensor domain CY96_12050 PF00107 Zinc-binding dehydrogenase CY96_12050 PF08240 Alcohol dehydrogenase GroES-like domain CY96_12055 PF01569 PAP2 superfamily CY96_12100 PF07690 Major Facilitator Superfamily CY96_12105 PF07690 Major Facilitator Superfamily CY96_12125 PF03009 Glycerophosphoryl diester phosphodiesterase family CY96_12145 PF00392 Bacterial regulatory proteins, gntR family CY96_12145 PF00155 Aminotransferase class I and II CY96_12150 PF00892 EamA-like transporter family CY96_12155 PF01270 Glycosyl hydrolases family 8 CY96_12160 PF01156 Inosine-uridine preferring nucleoside hydrolase CY96_12175 PF00293 NUDIX domain CY96_12175 PF13344 Haloacid dehalogenase-like hydrolase CY96_12195 PF07690 Major Facilitator Superfamily CY96_12205 PF09297 NADH pyrophosphatase zinc ribbon domain CY96_12205 PF00293 NUDIX domain CY96_12210 PF00712 DNA polymerase III beta subunit, N-terminal domain CY96_12210 PF02767 DNA polymerase III beta subunit, central domain CY96_12210 PF02768 DNA polymerase III beta subunit, C-terminal domain CY96_12220 PF12706 Beta-lactamase superfamily domain CY96_12240 PF09234 Domain of unknown function (DUF1963) CY96_12265 PF08000 Bacterial PH domain CY96_12275 PF12867 DinB superfamily CY96_12290 PF02673 Bacitracin resistance protein BacA CY96_12300 PF01541 GIY-YIG catalytic domain CY96_12340 PF01266 FAD dependent oxidoreductase CY96_12370 PF00072 Response regulator receiver domain CY96_12370 PF00486 Transcriptional regulatory protein, C terminal CY96_12375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_12375 PF00512 His Kinase A (phospho-acceptor) domain CY96_12375 PF00989 PAS fold CY96_12375 PF16736 Single Cache-like CY96_12390 PF00005 ABC transporter CY96_12395 PF02687 FtsX-like permease family CY96_12395 PF12704 MacB-like periplasmic core domain CY96_12405 PF07859 alpha/beta hydrolase fold CY96_12410 PF00282 Pyridoxal-dependent decarboxylase conserved domain CY96_12415 PF13193 AMP-binding enzyme C-terminal domain CY96_12415 PF00501 AMP-binding enzyme CY96_12415 PF00550 Phosphopantetheine attachment site CY96_12415 PF00668 Condensation domain CY96_12425 PF03714 Bacterial pullanase-associated domain CY96_12425 PF00128 Alpha amylase, catalytic domain CY96_12425 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CY96_12430 PF01447 Thermolysin metallopeptidase, catalytic domain CY96_12430 PF03413 Peptidase propeptide and YPEB domain CY96_12430 PF07504 Fungalysin/Thermolysin Propeptide Motif CY96_12430 PF02868 Thermolysin metallopeptidase, alpha-helical domain CY96_12435 PF02872 5'-nucleotidase, C-terminal domain CY96_12435 PF00149 Calcineurin-like phosphoesterase CY96_12450 PF00344 SecY translocase CY96_12455 PF00892 EamA-like transporter family CY96_12460 PF00392 Bacterial regulatory proteins, gntR family CY96_12460 PF00155 Aminotransferase class I and II CY96_12470 PF00561 alpha/beta hydrolase fold CY96_12495 PF06081 Aromatic acid exporter family member 1 CY96_12495 PF06081 Aromatic acid exporter family member 1 CY96_12510 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) CY96_12515 PF14620 YpeB sporulation CY96_12515 PF03413 Peptidase propeptide and YPEB domain CY96_12520 PF01471 Putative peptidoglycan binding domain CY96_12520 PF07486 Cell Wall Hydrolase CY96_12540 PF03301 Tryptophan 2,3-dioxygenase CY96_12545 PF04199 Putative cyclase CY96_12550 PF00266 Aminotransferase class-V CY96_12555 PF00440 Bacterial regulatory proteins, tetR family CY96_12555 PF08359 YsiA-like protein, C-terminal region CY96_12560 PF00293 NUDIX domain CY96_12560 PF13344 Haloacid dehalogenase-like hydrolase CY96_12585 PF01590 GAF domain CY96_12585 PF00158 Sigma-54 interaction domain CY96_12585 PF02954 Bacterial regulatory protein, Fis family CY96_12595 PF13302 Acetyltransferase (GNAT) domain CY96_12600 PF08220 DeoR-like helix-turn-helix domain CY96_12600 PF00455 DeoR C terminal sensor domain CY96_12615 PF02082 Transcriptional regulator CY96_12630 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CY96_12630 PF07992 Pyridine nucleotide-disulphide oxidoreductase CY96_12635 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CY96_12635 PF00364 Biotin-requiring enzyme CY96_12635 PF02817 e3 binding domain CY96_12640 PF02780 Transketolase, C-terminal domain CY96_12640 PF02779 Transketolase, pyrimidine binding domain CY96_12645 PF00676 Dehydrogenase E1 component CY96_12660 PF00106 short chain dehydrogenase CY96_12665 PF13673 Acetyltransferase (GNAT) domain CY96_12665 PF04229 GrpB protein CY96_12670 PF09297 NADH pyrophosphatase zinc ribbon domain CY96_12670 PF00293 NUDIX domain CY96_12695 PF00528 Binding-protein-dependent transport system inner membrane component CY96_12700 PF00005 ABC transporter CY96_12700 PF00571 CBS domain CY96_12705 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CY96_12710 PF00574 Clp protease CY96_12725 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CY96_12730 PF13673 Acetyltransferase (GNAT) domain CY96_12735 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CY96_12735 PF18416 N-acetylglucosamine binding protein domain 2 CY96_12740 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase CY96_12745 PF03781 Sulfatase-modifying factor enzyme 1 CY96_12760 PF10990 Protein of unknown function (DUF2809) CY96_12765 PF08241 Methyltransferase domain CY96_12770 PF04237 YjbR CY96_12825 PF00583 Acetyltransferase (GNAT) family CY96_12830 PF13538 UvrD-like helicase C-terminal domain CY96_12845 PF00270 DEAD/DEAH box helicase CY96_12845 PF00271 Helicase conserved C-terminal domain CY96_12845 PF00570 HRDC domain CY96_12845 PF16124 RecQ zinc-binding CY96_12845 PF09382 RQC domain CY96_12890 PF01368 DHH family CY96_12890 PF02833 DHHA2 domain CY96_12895 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CY96_12895 PF18416 N-acetylglucosamine binding protein domain 2 CY96_12910 PF03193 RsgA GTPase CY96_12915 PF02627 Carboxymuconolactone decarboxylase family CY96_12925 PF00171 Aldehyde dehydrogenase family CY96_12930 PF00701 Dihydrodipicolinate synthetase family CY96_12935 PF05544 Proline racemase CY96_12940 PF05544 Proline racemase CY96_12945 PF01266 FAD dependent oxidoreductase CY96_12950 PF00158 Sigma-54 interaction domain CY96_12950 PF13426 PAS domain CY96_12950 PF02954 Bacterial regulatory protein, Fis family CY96_12955 PF07992 Pyridine nucleotide-disulphide oxidoreductase CY96_12955 PF04324 BFD-like [2Fe-2S] binding domain CY96_12965 PF04324 BFD-like [2Fe-2S] binding domain CY96_12965 PF07992 Pyridine nucleotide-disulphide oxidoreductase CY96_12985 PF08876 Domain of unknown function (DUF1836) CY96_12995 PF01966 HD domain CY96_13000 PF09335 SNARE associated Golgi protein CY96_13010 PF04914 DltD protein CY96_13020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CY96_13025 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain CY96_13025 PF00877 NlpC/P60 family CY96_13030 PF13378 Enolase C-terminal domain-like CY96_13030 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CY96_13045 PF00248 Aldo/keto reductase family CY96_13050 PF01965 DJ-1/PfpI family CY96_13085 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CY96_13085 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CY96_13095 PF00672 HAMP domain CY96_13095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_13095 PF00512 His Kinase A (phospho-acceptor) domain CY96_13100 PF00486 Transcriptional regulatory protein, C terminal CY96_13100 PF00072 Response regulator receiver domain CY96_13120 PF13419 Haloacid dehalogenase-like hydrolase CY96_13130 PF03808 Glycosyl transferase WecB/TagA/CpsF family CY96_13135 PF08439 Oligopeptidase F CY96_13135 PF01432 Peptidase family M3 CY96_13140 PF02645 Uncharacterised protein, DegV family COG1307 CY96_13145 PF07552 Spore Coat Protein X and V domain CY96_13190 PF07690 Major Facilitator Superfamily CY96_13200 PF04519 Polymer-forming cytoskeletal CY96_13205 PF13171 Protein of unknown function (DUF4004) CY96_13210 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CY96_13210 PF12793 Sugar transport-related sRNA regulator N-term CY96_13215 PF07690 Major Facilitator Superfamily CY96_13235 PF04226 Transglycosylase associated protein CY96_13295 PF00155 Aminotransferase class I and II CY96_13300 PF07977 FabA-like domain CY96_13305 PF03630 Fumble CY96_13325 PF00005 ABC transporter CY96_13375 PF01594 AI-2E family transporter CY96_13390 PF00296 Luciferase-like monooxygenase CY96_13395 PF00528 Binding-protein-dependent transport system inner membrane component CY96_13400 PF09084 NMT1/THI5 like CY96_13405 PF00005 ABC transporter CY96_13435 PF02522 Aminoglycoside 3-N-acetyltransferase CY96_13455 PF13536 Putative multidrug resistance efflux transporter CY96_13475 PF08713 DNA alkylation repair enzyme CY96_13485 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CY96_13495 PF01522 Polysaccharide deacetylase CY96_13500 PF03741 Integral membrane protein TerC family CY96_13505 PF00884 Sulfatase CY96_13515 PF12848 ABC transporter CY96_13515 PF00005 ABC transporter CY96_13525 PF03176 MMPL family CY96_13530 PF00440 Bacterial regulatory proteins, tetR family CY96_13530 PF16295 Tetracyclin repressor-like, C-terminal domain CY96_13545 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CY96_13550 PF02153 Prephenate dehydrogenase CY96_13550 PF01842 ACT domain CY96_13555 PF00155 Aminotransferase class I and II CY96_13560 PF01264 Chorismate synthase CY96_13565 PF01817 Chorismate mutase type II CY96_13565 PF00793 DAHP synthetase I family CY96_13585 PF01636 Phosphotransferase enzyme family CY96_13605 PF06725 3D domain CY96_13605 PF01476 LysM domain CY96_13615 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CY96_13640 PF06039 Malate:quinone oxidoreductase (Mqo) CY96_13645 PF13407 Periplasmic binding protein domain CY96_13650 PF02653 Branched-chain amino acid transport system / permease component CY96_13655 PF02653 Branched-chain amino acid transport system / permease component CY96_13660 PF00005 ABC transporter CY96_13665 PF04198 Putative sugar-binding domain CY96_13665 PF00325 Bacterial regulatory proteins, crp family CY96_13670 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CY96_13670 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CY96_13680 PF01791 DeoC/LacD family aldolase CY96_13690 PF03992 Antibiotic biosynthesis monooxygenase CY96_13710 PF01773 Na+ dependent nucleoside transporter N-terminus CY96_13710 PF07662 Na+ dependent nucleoside transporter C-terminus CY96_13715 PF00171 Aldehyde dehydrogenase family CY96_13720 PF00696 Amino acid kinase family CY96_13720 PF01472 PUA domain CY96_13725 PF14748 Pyrroline-5-carboxylate reductase dimerisation CY96_13725 PF03807 NADP oxidoreductase coenzyme F420-dependent CY96_13730 PF01546 Peptidase family M20/M25/M40 CY96_13735 PF01614 Bacterial transcriptional regulator CY96_13735 PF09339 IclR helix-turn-helix domain CY96_13740 PF00324 Amino acid permease CY96_13750 PF00487 Fatty acid desaturase CY96_13755 PF05547 Immune inhibitor A peptidase M6 CY96_13760 PF04294 VanW like protein CY96_13765 PF00245 Alkaline phosphatase CY96_13770 PF11188 Protein of unknown function (DUF2975) CY96_13775 PF13443 Cro/C1-type HTH DNA-binding domain CY96_13800 PF13302 Acetyltransferase (GNAT) domain CY96_13805 PF12681 Glyoxalase-like domain CY96_13830 PF17863 AAA lid domain CY96_13830 PF07726 ATPase family associated with various cellular activities (AAA) CY96_13845 PF07690 Major Facilitator Superfamily CY96_13855 PF00535 Glycosyl transferase family 2 CY96_13875 PF00535 Glycosyl transferase family 2 CY96_13885 PF00202 Aminotransferase class-III CY96_13890 PF06628 Catalase-related immune-responsive CY96_13890 PF00199 Catalase CY96_13895 PF08453 Peptidase family M9 N-terminal CY96_13895 PF18496 Collagenase G catalytic helper subdomain CY96_13895 PF04151 Bacterial pre-peptidase C-terminal domain CY96_13895 PF01752 Collagenase CY96_13905 PF01979 Amidohydrolase family CY96_13905 PF13382 Adenine deaminase C-terminal domain CY96_13910 PF00144 Beta-lactamase CY96_13930 PF17863 AAA lid domain CY96_13930 PF07726 ATPase family associated with various cellular activities (AAA) CY96_13970 PF00881 Nitroreductase family CY96_13975 PF01047 MarR family CY96_13980 PF00009 Elongation factor Tu GTP binding domain CY96_13980 PF03764 Elongation factor G, domain IV CY96_13980 PF00679 Elongation factor G C-terminus CY96_13980 PF14492 Elongation Factor G, domain II CY96_13990 PF00293 NUDIX domain CY96_13995 PF05406 WGR domain CY96_14005 PF16363 GDP-mannose 4,6 dehydratase CY96_14010 PF02687 FtsX-like permease family CY96_14010 PF00005 ABC transporter CY96_14010 PF12704 MacB-like periplasmic core domain CY96_14035 PF12833 Helix-turn-helix domain CY96_14040 PF14437 MafB19-like deaminase CY96_14040 PF01171 PP-loop family CY96_14040 PF11734 TilS substrate C-terminal domain CY96_14045 PF00583 Acetyltransferase (GNAT) family CY96_14060 PF00892 EamA-like transporter family CY96_14065 PF00155 Aminotransferase class I and II CY96_14065 PF00392 Bacterial regulatory proteins, gntR family CY96_14070 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CY96_14075 PF13031 Protein of unknown function (DUF3892) CY96_14110 PF01925 Sulfite exporter TauE/SafE CY96_14120 PF00324 Amino acid permease CY96_14130 PF08713 DNA alkylation repair enzyme CY96_14150 PF00293 NUDIX domain CY96_14155 PF04989 Cephalosporin hydroxylase CY96_14160 PF10502 Signal peptidase, peptidase S26 CY96_14175 PF02146 Sir2 family CY96_14180 PF01470 Pyroglutamyl peptidase CY96_14195 PF03746 LamB/YcsF family CY96_14200 PF02626 Carboxyltransferase domain, subdomain A and B CY96_14205 PF02682 Carboxyltransferase domain, subdomain C and D CY96_14210 PF01614 Bacterial transcriptional regulator CY96_14210 PF09339 IclR helix-turn-helix domain CY96_14215 PF10502 Signal peptidase, peptidase S26 CY96_14220 PF03932 CutC family CY96_14240 PF02770 Acyl-CoA dehydrogenase, middle domain CY96_14240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CY96_14240 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CY96_14275 PF10903 Protein of unknown function (DUF2691) CY96_14280 PF02915 Rubrerythrin CY96_14295 PF00391 PEP-utilising enzyme, mobile domain CY96_14295 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CY96_14305 PF00733 Asparagine synthase CY96_14305 PF13537 Glutamine amidotransferase domain CY96_14310 PF03466 LysR substrate binding domain CY96_14310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CY96_14340 PF01037 Lrp/AsnC ligand binding domain CY96_14350 PF00753 Metallo-beta-lactamase superfamily CY96_14355 PF10710 Protein of unknown function (DUF2512) CY96_14360 PF11553 Protein of unknown function (DUF3231) CY96_14365 PF00269 Small, acid-soluble spore proteins, alpha/beta type CY96_14370 PF08240 Alcohol dehydrogenase GroES-like domain CY96_14370 PF13823 Alcohol dehydrogenase GroES-associated CY96_14370 PF00107 Zinc-binding dehydrogenase CY96_14380 PF10415 Fumarase C C-terminus CY96_14380 PF00206 Lyase CY96_14385 PF00710 Asparaginase, N-terminal CY96_14385 PF17763 Glutaminase/Asparaginase C-terminal domain CY96_14390 PF01381 Helix-turn-helix CY96_14395 PF05504 Spore germination B3/ GerAC like, C-terminal CY96_14400 PF03845 Spore germination protein CY96_14405 PF03323 Bacillus/Clostridium GerA spore germination protein CY96_14430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_14430 PF00989 PAS fold CY96_14430 PF00512 His Kinase A (phospho-acceptor) domain CY96_14430 PF16736 Single Cache-like CY96_14435 PF00486 Transcriptional regulatory protein, C terminal CY96_14435 PF00072 Response regulator receiver domain CY96_14445 PF13426 PAS domain CY96_14445 PF13188 PAS domain CY96_14445 PF00989 PAS fold CY96_14445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_14445 PF00512 His Kinase A (phospho-acceptor) domain CY96_14450 PF05791 Bacillus haemolytic enterotoxin (HBL) CY96_14455 PF05791 Bacillus haemolytic enterotoxin (HBL) CY96_14470 PF17853 GGDEF-like domain CY96_14470 PF12833 Helix-turn-helix domain CY96_14480 PF00269 Small, acid-soluble spore proteins, alpha/beta type CY96_14485 PF08459 UvrC Helix-hairpin-helix N-terminal CY96_14485 PF02151 UvrB/uvrC motif CY96_14485 PF12826 Helix-hairpin-helix motif CY96_14485 PF01541 GIY-YIG catalytic domain CY96_14490 PF13520 Amino acid permease CY96_14495 PF14748 Pyrroline-5-carboxylate reductase dimerisation CY96_14495 PF03807 NADP oxidoreductase coenzyme F420-dependent CY96_14500 PF05504 Spore germination B3/ GerAC like, C-terminal CY96_14505 PF03845 Spore germination protein CY96_14510 PF03323 Bacillus/Clostridium GerA spore germination protein CY96_14520 PF00072 Response regulator receiver domain CY96_14520 PF08664 YcbB domain CY96_14525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_14530 PF04960 Glutaminase CY96_14540 PF01235 Sodium:alanine symporter family CY96_14550 PF00144 Beta-lactamase CY96_14560 PF00149 Calcineurin-like phosphoesterase CY96_14560 PF02872 5'-nucleotidase, C-terminal domain CY96_14560 PF17936 Bacterial Ig domain CY96_14565 PF00561 alpha/beta hydrolase fold CY96_14570 PF00857 Isochorismatase family CY96_14585 PF01979 Amidohydrolase family CY96_14590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CY96_14590 PF03466 LysR substrate binding domain CY96_14595 PF07690 Major Facilitator Superfamily CY96_14600 PF18496 Collagenase G catalytic helper subdomain CY96_14600 PF08453 Peptidase family M9 N-terminal CY96_14600 PF01752 Collagenase CY96_14620 PF01544 CorA-like Mg2+ transporter protein CY96_14635 PF11181 Heat induced stress protein YflT CY96_14640 PF13026 Protein of unknown function (DUF3887) CY96_14640 PF12146 Serine aminopeptidase, S33 CY96_14655 PF03073 TspO/MBR family CY96_14660 PF00875 DNA photolyase CY96_14660 PF03441 FAD binding domain of DNA photolyase CY96_14670 PF01047 MarR family CY96_14675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_14675 PF00512 His Kinase A (phospho-acceptor) domain CY96_14680 PF00486 Transcriptional regulatory protein, C terminal CY96_14680 PF00072 Response regulator receiver domain CY96_14690 PF07690 Major Facilitator Superfamily CY96_14700 PF07859 alpha/beta hydrolase fold CY96_14710 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) CY96_14715 PF00361 Proton-conducting membrane transporter CY96_14715 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CY96_14720 PF10057 Uncharacterized conserved protein (DUF2294) CY96_14725 PF07690 Major Facilitator Superfamily CY96_14745 PF01522 Polysaccharide deacetylase CY96_14755 PF01040 UbiA prenyltransferase family CY96_14760 PF01965 DJ-1/PfpI family CY96_14760 PF12833 Helix-turn-helix domain CY96_14775 PF01451 Low molecular weight phosphotyrosine protein phosphatase CY96_14780 PF01758 Sodium Bile acid symporter family CY96_14785 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CY96_14790 PF01022 Bacterial regulatory protein, arsR family CY96_14805 PF00550 Phosphopantetheine attachment site CY96_14805 PF07993 Male sterility protein CY96_14810 PF00440 Bacterial regulatory proteins, tetR family CY96_14810 PF18665 Tetracyclin repressor-like, C-terminal domain CY96_14830 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CY96_14870 PF01810 LysE type translocator CY96_14905 PF00196 Bacterial regulatory proteins, luxR family CY96_14905 PF00072 Response regulator receiver domain CY96_14915 PF00667 FAD binding domain CY96_14915 PF00067 Cytochrome P450 CY96_14915 PF00175 Oxidoreductase NAD-binding domain CY96_14915 PF00258 Flavodoxin CY96_14920 PF07690 Major Facilitator Superfamily CY96_14940 PF00291 Pyridoxal-phosphate dependent enzyme CY96_14950 PF01139 tRNA-splicing ligase RtcB CY96_14960 PF04072 Leucine carboxyl methyltransferase CY96_14975 PF00005 ABC transporter CY96_14980 PF02687 FtsX-like permease family CY96_14995 PF00512 His Kinase A (phospho-acceptor) domain CY96_14995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_14995 PF00672 HAMP domain CY96_15000 PF00486 Transcriptional regulatory protein, C terminal CY96_15000 PF00072 Response regulator receiver domain CY96_15005 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CY96_15005 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CY96_15035 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CY96_15035 PF01842 ACT domain CY96_15035 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CY96_15040 PF00266 Aminotransferase class-V CY96_15075 PF01510 N-acetylmuramoyl-L-alanine amidase CY96_15075 PF01476 LysM domain CY96_15075 PF01471 Putative peptidoglycan binding domain CY96_15340 PF04634 Protein of unknown function, DUF600 CY96_15345 PF04740 LXG domain of WXG superfamily CY96_15355 PF04740 LXG domain of WXG superfamily CY96_15490 PF02557 D-alanyl-D-alanine carboxypeptidase CY96_15495 PF09587 Bacterial capsule synthesis protein PGA_cap CY96_15500 PF14044 NETI protein CY96_15505 PF07690 Major Facilitator Superfamily CY96_15515 PF12697 Alpha/beta hydrolase family CY96_15520 PF01047 MarR family CY96_15525 PF07690 Major Facilitator Superfamily CY96_15535 PF02667 Short chain fatty acid transporter CY96_15565 PF14256 YwiC-like protein CY96_15575 PF00005 ABC transporter CY96_15595 PF03737 Aldolase/RraA CY96_15600 PF03606 C4-dicarboxylate anaerobic carrier CY96_15605 PF04231 Endonuclease I CY96_15625 PF04073 Aminoacyl-tRNA editing domain CY96_15630 PF13393 Histidyl-tRNA synthetase CY96_15630 PF03129 Anticodon binding domain CY96_15645 PF01638 HxlR-like helix-turn-helix CY96_15650 PF00881 Nitroreductase family CY96_15660 PF00391 PEP-utilising enzyme, mobile domain CY96_15660 PF02887 Pyruvate kinase, alpha/beta domain CY96_15660 PF00224 Pyruvate kinase, barrel domain CY96_15690 PF00005 ABC transporter CY96_15715 PF13419 Haloacid dehalogenase-like hydrolase CY96_15735 PF13344 Haloacid dehalogenase-like hydrolase CY96_15735 PF00293 NUDIX domain CY96_15740 PF00579 tRNA synthetases class I (W and Y) CY96_15745 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CY96_15745 PF13288 DXP reductoisomerase C-terminal domain CY96_15745 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CY96_15750 PF01594 AI-2E family transporter CY96_15780 PF08003 Protein of unknown function (DUF1698) CY96_15790 PF07690 Major Facilitator Superfamily CY96_15810 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CY96_15820 PF00571 CBS domain CY96_15820 PF01595 Cyclin M transmembrane N-terminal domain CY96_15820 PF03471 Transporter associated domain CY96_15825 PF13411 MerR HTH family regulatory protein CY96_15835 PF00483 Nucleotidyl transferase CY96_15840 PF16363 GDP-mannose 4,6 dehydratase CY96_15845 PF08484 C-methyltransferase C-terminal domain CY96_15845 PF08421 Putative zinc binding domain CY96_15850 PF01370 NAD dependent epimerase/dehydratase family CY96_15865 PF00892 EamA-like transporter family CY96_15875 PF00805 Pentapeptide repeats (8 copies) CY96_15880 PF06906 Protein of unknown function (DUF1272) CY96_15885 PF10282 Lactonase, 7-bladed beta-propeller CY96_15890 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CY96_15890 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CY96_15895 PF02447 GntP family permease CY96_15900 PF00923 Transaldolase/Fructose-6-phosphate aldolase CY96_15905 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CY96_15905 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CY96_15910 PF02779 Transketolase, pyrimidine binding domain CY96_15910 PF00456 Transketolase, thiamine diphosphate binding domain CY96_15910 PF02780 Transketolase, C-terminal domain CY96_15915 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CY96_15915 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CY96_15920 PF08240 Alcohol dehydrogenase GroES-like domain CY96_15920 PF00107 Zinc-binding dehydrogenase CY96_15920 PF00698 Acyl transferase domain CY96_15920 PF00550 Phosphopantetheine attachment site CY96_15920 PF16197 Ketoacyl-synthetase C-terminal extension CY96_15920 PF00109 Beta-ketoacyl synthase, N-terminal domain CY96_15920 PF02801 Beta-ketoacyl synthase, C-terminal domain CY96_15920 PF08659 KR domain CY96_15920 PF14765 Polyketide synthase dehydratase CY96_15925 PF01447 Thermolysin metallopeptidase, catalytic domain CY96_15925 PF02868 Thermolysin metallopeptidase, alpha-helical domain CY96_15925 PF07504 Fungalysin/Thermolysin Propeptide Motif CY96_15925 PF03413 Peptidase propeptide and YPEB domain CY96_15935 PF12729 Four helix bundle sensory module for signal transduction CY96_15935 PF00672 HAMP domain CY96_15935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CY96_15945 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) CY96_15950 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CY96_15950 PF01872 RibD C-terminal domain CY96_15955 PF00925 GTP cyclohydrolase II CY96_15960 PF01638 HxlR-like helix-turn-helix CY96_15970 PF03928 Haem-degrading CY96_15985 PF03831 PhnA domain CY96_15985 PF08274 PhnA Zinc-Ribbon CY96_15990 PF00916 Sulfate permease family CY96_15990 PF01740 STAS domain CY96_16025 PF03960 ArsC family CY96_16030 PF07702 UTRA domain CY96_16030 PF00392 Bacterial regulatory proteins, gntR family CY96_16035 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CY96_16035 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CY96_16075 PF02567 Phenazine biosynthesis-like protein CY96_16085 PF00501 AMP-binding enzyme CY96_16085 PF13193 AMP-binding enzyme C-terminal domain CY96_16090 PF02525 Flavodoxin-like fold CY96_16095 PF01638 HxlR-like helix-turn-helix CY96_16105 PF01022 Bacterial regulatory protein, arsR family CY96_16110 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain CY96_16110 PF01522 Polysaccharide deacetylase CY96_16115 PF12791 Anti-sigma factor N-terminus CY96_16120 PF04542 Sigma-70 region 2 CY96_16125 PF00535 Glycosyl transferase family 2 CY96_16125 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 CY96_16155 PF01061 ABC-2 type transporter CY96_16160 PF00005 ABC transporter CY96_16160 PF13732 Domain of unknown function (DUF4162) CY96_16175 PF03063 Prismane/CO dehydrogenase family CY96_16185 PF00753 Metallo-beta-lactamase superfamily CY96_16235 PF00753 Metallo-beta-lactamase superfamily CY96_16240 PF00324 Amino acid permease CY96_16245 PF07690 Major Facilitator Superfamily CY96_16275 PF02585 GlcNAc-PI de-N-acetylase CY96_16280 PF08830 Protein of unknown function (DUF1806) CY96_16285 PF03600 Citrate transporter CY96_16295 PF00583 Acetyltransferase (GNAT) family CY96_16300 PF01497 Periplasmic binding protein CY96_16305 PF01032 FecCD transport family CY96_16310 PF01032 FecCD transport family CY96_16315 PF05675 Protein of unknown function (DUF817) CY96_16320 PF13170 Protein of unknown function (DUF4003) CY96_16335 PF10901 Protein of unknown function (DUF2690) CY96_16345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CY96_16345 PF03466 LysR substrate binding domain CY96_16350 PF00107 Zinc-binding dehydrogenase CY96_16350 PF08240 Alcohol dehydrogenase GroES-like domain CY96_16385 PF00128 Alpha amylase, catalytic domain CY96_16385 PF09154 Domain of unknown function (DUF1939) CY96_16390 PF00797 N-acetyltransferase CY96_16395 PF01432 Peptidase family M3 CY96_16395 PF08439 Oligopeptidase F CY96_16400 PF00144 Beta-lactamase CY96_16415 PF03466 LysR substrate binding domain CY96_16415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CY96_16425 PF03009 Glycerophosphoryl diester phosphodiesterase family CY96_16430 PF01494 FAD binding domain CY96_16440 PF01022 Bacterial regulatory protein, arsR family CY96_16445 PF08240 Alcohol dehydrogenase GroES-like domain CY96_16445 PF00107 Zinc-binding dehydrogenase CY96_16450 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CY96_16455 PF18801 response regulator aspartate phosphatase H, N terminal CY96_16455 PF17874 MalT-like TPR region CY96_16465 PF04299 Putative FMN-binding domain CY96_16470 PF13673 Acetyltransferase (GNAT) domain CY96_16470 PF04229 GrpB protein CY96_16485 PF01565 FAD binding domain CY96_16485 PF02913 FAD linked oxidases, C-terminal domain CY96_16510 PF01066 CDP-alcohol phosphatidyltransferase CY96_16525 PF00753 Metallo-beta-lactamase superfamily CY96_16525 PF00581 Rhodanese-like domain CY96_16530 PF07992 Pyridine nucleotide-disulphide oxidoreductase CY96_16540 PF00483 Nucleotidyl transferase CY96_16550 PF01370 NAD dependent epimerase/dehydratase family CY96_16555 PF16363 GDP-mannose 4,6 dehydratase CY96_16560 PF18801 response regulator aspartate phosphatase H, N terminal CY96_16570 PF02743 Cache domain CY96_16570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CY96_16570 PF00672 HAMP domain CY96_16610 PF00563 EAL domain CY96_16610 PF00990 Diguanylate cyclase, GGDEF domain CY96_16610 PF03707 Bacterial signalling protein N terminal repeat CY96_16635 PF00512 His Kinase A (phospho-acceptor) domain CY96_16635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_16635 PF00989 PAS fold CY96_16640 PF18496 Collagenase G catalytic helper subdomain CY96_16640 PF01752 Collagenase CY96_16640 PF08453 Peptidase family M9 N-terminal CY96_16645 PF02308 MgtC family CY96_16655 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CY96_16660 PF04294 VanW like protein CY96_16670 PF13039 Protein of unknown function (DUF3900) CY96_16670 PF13037 Domain of unknown function (DUF3898) CY96_16690 PF00313 'Cold-shock' DNA-binding domain CY96_16700 PF00258 Flavodoxin CY96_16720 PF00132 Bacterial transferase hexapeptide (six repeats) CY96_16730 PF00106 short chain dehydrogenase CY96_16740 PF00206 Lyase CY96_16740 PF14698 Argininosuccinate lyase C-terminal CY96_16750 PF01156 Inosine-uridine preferring nucleoside hydrolase CY96_16755 PF00474 Sodium:solute symporter family CY96_16765 PF00171 Aldehyde dehydrogenase family CY96_16775 PF14151 YfhD-like protein CY96_16780 PF13249 Squalene-hopene cyclase N-terminal domain CY96_16780 PF13243 Squalene-hopene cyclase C-terminal domain CY96_16785 PF02681 Divergent PAP2 family CY96_16790 PF00892 EamA-like transporter family CY96_16795 PF06961 Protein of unknown function (DUF1294) CY96_16810 PF10609 NUBPL iron-transfer P-loop NTPase CY96_16820 PF02391 MoaE protein CY96_16825 PF03454 MoeA C-terminal region (domain IV) CY96_16825 PF03453 MoeA N-terminal region (domain I and II) CY96_16825 PF00994 Probable molybdopterin binding domain CY96_16830 PF00899 ThiF family CY96_16835 PF01226 Formate/nitrite transporter CY96_16840 PF06463 Molybdenum Cofactor Synthesis C CY96_16840 PF04055 Radical SAM superfamily CY96_16845 PF02634 FdhD/NarQ family CY96_16850 PF10057 Uncharacterized conserved protein (DUF2294) CY96_16855 PF07849 Protein of unknown function (DUF1641) CY96_16860 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CY96_16860 PF00037 4Fe-4S binding domain CY96_16860 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CY96_16860 PF00384 Molybdopterin oxidoreductase CY96_16860 PF01568 Molydopterin dinucleotide binding domain CY96_16865 PF03323 Bacillus/Clostridium GerA spore germination protein CY96_16880 PF13520 Amino acid permease CY96_16915 PF08241 Methyltransferase domain CY96_16920 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CY96_16925 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CY96_16930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CY96_16935 PF03816 Cell envelope-related transcriptional attenuator domain CY96_16945 PF08281 Sigma-70, region 4 CY96_16945 PF04542 Sigma-70 region 2 CY96_16955 PF00005 ABC transporter CY96_16955 PF13732 Domain of unknown function (DUF4162) CY96_16965 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CY96_16965 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CY96_16970 PF00521 DNA gyrase/topoisomerase IV, subunit A CY96_16970 PF03989 DNA gyrase C-terminal domain, beta-propeller CY96_16975 PF00986 DNA gyrase B subunit, carboxyl terminus CY96_16975 PF01751 Toprim domain CY96_16975 PF00204 DNA gyrase B CY96_16975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_16980 PF13380 CoA binding domain CY96_16985 PF13180 PDZ domain CY96_16990 PF00072 Response regulator receiver domain CY96_16990 PF00486 Transcriptional regulatory protein, C terminal CY96_17000 PF13597 Anaerobic ribonucleoside-triphosphate reductase CY96_17000 PF03477 ATP cone domain CY96_17005 PF02660 Glycerol-3-phosphate acyltransferase CY96_17010 PF01521 Iron-sulphur cluster biosynthesis CY96_17015 PF03061 Thioesterase superfamily CY96_17020 PF00704 Glycosyl hydrolases family 18 CY96_17020 PF01476 LysM domain CY96_17030 PF08177 Small acid-soluble spore protein N family CY96_17040 PF00929 Exonuclease CY96_17040 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CY96_17040 PF07733 Bacterial DNA polymerase III alpha NTPase domain CY96_17040 PF14579 Helix-hairpin-helix motif CY96_17040 PF01336 OB-fold nucleic acid binding domain CY96_17040 PF11490 DNA polymerase III polC-type N-terminus II CY96_17040 PF02811 PHP domain CY96_17045 PF00578 AhpC/TSA family CY96_17060 PF00664 ABC transporter transmembrane region CY96_17060 PF00005 ABC transporter CY96_17065 PF00330 Aconitase family (aconitate hydratase) CY96_17065 PF00694 Aconitase C-terminal domain CY96_17075 PF01522 Polysaccharide deacetylase CY96_17085 PF08179 Small acid-soluble spore protein P family CY96_17095 PF07690 Major Facilitator Superfamily CY96_17105 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CY96_17105 PF01411 tRNA synthetases class II (A) CY96_17105 PF02272 DHHA1 domain CY96_17110 PF00293 NUDIX domain CY96_17110 PF13344 Haloacid dehalogenase-like hydrolase CY96_17120 PF00108 Thiolase, N-terminal domain CY96_17120 PF02803 Thiolase, C-terminal domain CY96_17125 PF13193 AMP-binding enzyme C-terminal domain CY96_17125 PF00501 AMP-binding enzyme CY96_17130 PF02632 BioY family CY96_17135 PF00501 AMP-binding enzyme CY96_17135 PF13193 AMP-binding enzyme C-terminal domain CY96_17140 PF01381 Helix-turn-helix CY96_17160 PF05532 CsbD-like CY96_17180 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CY96_17180 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CY96_17190 PF00512 His Kinase A (phospho-acceptor) domain CY96_17190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_17190 PF00989 PAS fold CY96_17190 PF13188 PAS domain CY96_17190 PF13426 PAS domain CY96_17195 PF01738 Dienelactone hydrolase family CY96_17200 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CY96_17210 PF01645 Conserved region in glutamate synthase CY96_17215 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CY96_17220 PF02559 CarD-like/TRCF domain CY96_17225 PF00491 Arginase family CY96_17230 PF01979 Amidohydrolase family CY96_17235 PF17391 Urocanase N-terminal domain CY96_17235 PF17392 Urocanase C-terminal domain CY96_17235 PF01175 Urocanase Rossmann-like domain CY96_17240 PF00221 Aromatic amino acid lyase CY96_17245 PF09021 HutP CY96_17250 PF01209 ubiE/COQ5 methyltransferase family CY96_17270 PF11084 Protein of unknown function (DUF2621) CY96_17275 PF07301 Protein of unknown function (DUF1453) CY96_17280 PF02683 Cytochrome C biogenesis protein transmembrane region CY96_17305 PF00005 ABC transporter CY96_17320 PF03466 LysR substrate binding domain CY96_17320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CY96_17325 PF03788 LrgA family CY96_17330 PF04172 LrgB-like family CY96_17335 PF00293 NUDIX domain CY96_17335 PF13344 Haloacid dehalogenase-like hydrolase CY96_17345 PF01925 Sulfite exporter TauE/SafE CY96_17365 PF01183 Glycosyl hydrolases family 25 CY96_17365 PF08239 Bacterial SH3 domain CY96_17370 PF00664 ABC transporter transmembrane region CY96_17370 PF00005 ABC transporter CY96_17375 PF00664 ABC transporter transmembrane region CY96_17375 PF00005 ABC transporter CY96_17380 PF03672 Uncharacterised protein family (UPF0154) CY96_17385 PF10747 Sporulation inhibitor of replication protein SirA CY96_17390 PF00456 Transketolase, thiamine diphosphate binding domain CY96_17390 PF02779 Transketolase, pyrimidine binding domain CY96_17390 PF02780 Transketolase, C-terminal domain CY96_17395 PF00528 Binding-protein-dependent transport system inner membrane component CY96_17400 PF00528 Binding-protein-dependent transport system inner membrane component CY96_17405 PF00005 ABC transporter CY96_17410 PF00497 Bacterial extracellular solute-binding proteins, family 3 CY96_17415 PF00149 Calcineurin-like phosphoesterase CY96_17415 PF02872 5'-nucleotidase, C-terminal domain CY96_17420 PF05979 Bacterial protein of unknown function (DUF896) CY96_17425 PF00239 Resolvase, N terminal domain CY96_17430 PF00717 Peptidase S24-like CY96_17430 PF01726 LexA DNA binding domain CY96_17445 PF03551 Transcriptional regulator PadR-like family CY96_17465 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CY96_17465 PF13457 GW (Gly-Tryp) dipeptide domain CY96_17480 PF01510 N-acetylmuramoyl-L-alanine amidase CY96_17480 PF12123 N-acetylmuramoyl-l-alanine amidase CY96_17485 PF01551 Peptidase family M23 CY96_17485 PF04225 Opacity-associated protein A LysM-like domain CY96_17525 PF01726 LexA DNA binding domain CY96_17525 PF00717 Peptidase S24-like CY96_17530 PF00120 Glutamine synthetase, catalytic domain CY96_17530 PF03951 Glutamine synthetase, beta-Grasp domain CY96_17535 PF13411 MerR HTH family regulatory protein CY96_17540 PF06838 Methionine gamma-lyase CY96_17545 PF16360 GTP-binding GTPase Middle Region CY96_17545 PF01926 50S ribosome-binding GTPase CY96_17545 PF13167 GTP-binding GTPase N-terminal CY96_17550 PF03458 UPF0126 domain CY96_17560 PF00004 ATPase family associated with various cellular activities (AAA) CY96_17560 PF17866 AAA lid domain CY96_17580 PF17209 Hfq protein CY96_17595 PF06725 3D domain CY96_17595 PF01476 LysM domain CY96_17600 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CY96_17600 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CY96_17605 PF00294 pfkB family carbohydrate kinase CY96_17610 PF08220 DeoR-like helix-turn-helix domain CY96_17610 PF00455 DeoR C terminal sensor domain CY96_17615 PF00465 Iron-containing alcohol dehydrogenase CY96_17620 PF04238 Protein of unknown function (DUF420) CY96_17635 PF00324 Amino acid permease CY96_17640 PF00704 Glycosyl hydrolases family 18 CY96_17640 PF00041 Fibronectin type III domain CY96_17645 PF10518 TAT (twin-arginine translocation) pathway signal sequence CY96_17645 PF00149 Calcineurin-like phosphoesterase CY96_17650 PF01226 Formate/nitrite transporter CY96_17655 PF00216 Bacterial DNA-binding protein CY96_17665 PF00403 Heavy-metal-associated domain CY96_17670 PF00403 Heavy-metal-associated domain CY96_17675 PF02583 Metal-sensitive transcriptional repressor CY96_17685 PF03180 NLPA lipoprotein CY96_17690 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CY96_17690 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CY96_17695 PF10509 Galactokinase galactose-binding signature CY96_17695 PF08544 GHMP kinases C terminal CY96_17695 PF00288 GHMP kinases N terminal domain CY96_17700 PF01263 Aldose 1-epimerase CY96_17705 PF12833 Helix-turn-helix domain CY96_17705 PF02311 AraC-like ligand binding domain CY96_17710 PF02278 Polysaccharide lyase family 8, super-sandwich domain CY96_17710 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain CY96_17710 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain CY96_17715 PF01301 Glycosyl hydrolases family 35 CY96_17720 PF07470 Glycosyl Hydrolase Family 88 CY96_17725 PF03830 PTS system sorbose subfamily IIB component CY96_17725 PF03610 PTS system fructose IIA component CY96_17730 PF03613 PTS system mannose/fructose/sorbose family IID component CY96_17735 PF03609 PTS system sorbose-specific iic component CY96_17750 PF04962 KduI/IolB family CY96_17755 PF00294 pfkB family carbohydrate kinase CY96_17765 PF01614 Bacterial transcriptional regulator CY96_17775 PF00756 Putative esterase CY96_17780 PF00005 ABC transporter CY96_17785 PF01032 FecCD transport family CY96_17790 PF01032 FecCD transport family CY96_17795 PF01497 Periplasmic binding protein CY96_17800 PF12833 Helix-turn-helix domain CY96_17800 PF02805 Metal binding domain of Ada CY96_17805 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CY96_17805 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CY96_17810 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain CY96_17810 PF00730 HhH-GPD superfamily base excision DNA repair protein CY96_17815 PF07687 Peptidase dimerisation domain CY96_17815 PF01546 Peptidase family M20/M25/M40 CY96_17830 PF00561 alpha/beta hydrolase fold CY96_17835 PF00563 EAL domain CY96_17835 PF00990 Diguanylate cyclase, GGDEF domain CY96_17835 PF03707 Bacterial signalling protein N terminal repeat CY96_17840 PF03033 Glycosyltransferase family 28 N-terminal domain CY96_17840 PF04101 Glycosyltransferase family 28 C-terminal domain CY96_17850 PF16363 GDP-mannose 4,6 dehydratase CY96_17855 PF08485 Polysaccharide biosynthesis protein C-terminal CY96_17855 PF02719 Polysaccharide biosynthesis protein CY96_17865 PF10787 Uncharacterised protein from bacillus cereus group CY96_17870 PF04172 LrgB-like family CY96_17875 PF03788 LrgA family CY96_17880 PF00392 Bacterial regulatory proteins, gntR family CY96_17880 PF00155 Aminotransferase class I and II CY96_17890 PF00388 Phosphatidylinositol-specific phospholipase C, X domain CY96_17895 PF00082 Subtilase family CY96_17900 PF07486 Cell Wall Hydrolase CY96_17910 PF00884 Sulfatase CY96_17915 PF00350 Dynamin family CY96_17925 PF08676 MutL C terminal dimerisation domain CY96_17925 PF01119 DNA mismatch repair protein, C-terminal domain CY96_17930 PF00488 MutS domain V CY96_17930 PF01624 MutS domain I CY96_17930 PF05190 MutS family domain IV CY96_17930 PF05188 MutS domain II CY96_17930 PF05192 MutS domain III CY96_17935 PF10628 Outer spore coat protein E (CotE) CY96_17940 PF06133 Control of competence regulator ComK, YlbF/YmcA CY96_17945 PF01938 TRAM domain CY96_17945 PF00919 Uncharacterized protein family UPF0004 CY96_17945 PF04055 Radical SAM superfamily CY96_17950 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CY96_17955 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CY96_17955 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CY96_17955 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CY96_17960 PF01244 Membrane dipeptidase (Peptidase family M19) CY96_17965 PF04232 Stage V sporulation protein S (SpoVS) CY96_17970 PF13277 YmdB-like protein CY96_17975 PF12072 Domain of unknown function (DUF3552) CY96_17975 PF00013 KH domain CY96_17975 PF01966 HD domain CY96_17985 PF18146 Damage-inducible protein CinA KH domain CY96_17985 PF02464 Competence-damaged protein CY96_17985 PF00994 Probable molybdopterin binding domain CY96_17990 PF01066 CDP-alcohol phosphatidyltransferase CY96_17995 PF13464 Domain of unknown function (DUF4115) CY96_18000 PF11868 Protein of unknown function (DUF3388) CY96_18005 PF11588 Protein of unknown function (DUF3243) CY96_18015 PF00675 Insulinase (Peptidase family M16) CY96_18015 PF05193 Peptidase M16 inactive domain CY96_18020 PF05193 Peptidase M16 inactive domain CY96_18045 PF00392 Bacterial regulatory proteins, gntR family CY96_18045 PF07702 UTRA domain CY96_18050 PF01580 FtsK/SpoIIIE family CY96_18050 PF09397 Ftsk gamma domain CY96_18050 PF17854 FtsK alpha domain CY96_18055 PF14035 YlzJ-like protein CY96_18060 PF00574 Clp protease CY96_18065 PF17770 Ribonuclease J C-terminal domain CY96_18065 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CY96_18065 PF00753 Metallo-beta-lactamase superfamily CY96_18070 PF00701 Dihydrodipicolinate synthetase family CY96_18075 PF13840 ACT domain CY96_18075 PF00696 Amino acid kinase family CY96_18080 PF01118 Semialdehyde dehydrogenase, NAD binding domain CY96_18080 PF02774 Semialdehyde dehydrogenase, dimerisation domain CY96_18085 PF02441 Flavoprotein CY96_18090 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CY96_18090 PF16924 Dipicolinate synthase subunit A N-terminal domain CY96_18095 PF05239 PRC-barrel domain CY96_18100 PF05193 Peptidase M16 inactive domain CY96_18100 PF00675 Insulinase (Peptidase family M16) CY96_18105 PF01522 Polysaccharide deacetylase CY96_18110 PF00013 KH domain CY96_18110 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CY96_18110 PF01138 3' exoribonuclease family, domain 1 CY96_18110 PF03725 3' exoribonuclease family, domain 2 CY96_18110 PF00575 S1 RNA binding domain CY96_18115 PF00312 Ribosomal protein S15 CY96_18120 PF06574 FAD synthetase CY96_18120 PF01687 Riboflavin kinase CY96_18125 PF16198 tRNA pseudouridylate synthase B C-terminal domain CY96_18125 PF01509 TruB family pseudouridylate synthase (N terminal domain) CY96_18130 PF02033 Ribosome-binding factor A CY96_18135 PF04456 Protein of unknown function (DUF503) CY96_18140 PF00009 Elongation factor Tu GTP binding domain CY96_18140 PF04760 Translation initiation factor IF-2, N-terminal region CY96_18140 PF11987 Translation-initiation factor 2 CY96_18145 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CY96_18150 PF04296 Protein of unknown function (DUF448) CY96_18155 PF13184 NusA-like KH domain CY96_18155 PF00575 S1 RNA binding domain CY96_18155 PF08529 NusA N-terminal domain CY96_18160 PF02576 RimP N-terminal domain CY96_18160 PF17384 RimP C-terminal SH3 domain CY96_18165 PF02811 PHP domain CY96_18165 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CY96_18165 PF07733 Bacterial DNA polymerase III alpha NTPase domain CY96_18165 PF11490 DNA polymerase III polC-type N-terminus II CY96_18165 PF14480 DNA polymerase III polC-type N-terminus I CY96_18165 PF00929 Exonuclease CY96_18165 PF14579 Helix-hairpin-helix motif CY96_18170 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CY96_18170 PF03129 Anticodon binding domain CY96_18170 PF04073 Aminoacyl-tRNA editing domain CY96_18175 PF17820 PDZ domain CY96_18175 PF02163 Peptidase family M50 CY96_18180 PF13288 DXP reductoisomerase C-terminal domain CY96_18180 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CY96_18180 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CY96_18190 PF01255 Putative undecaprenyl diphosphate synthase CY96_18195 PF01765 Ribosome recycling factor CY96_18200 PF00696 Amino acid kinase family CY96_18205 PF00889 Elongation factor TS CY96_18210 PF00318 Ribosomal protein S2 CY96_18215 PF08222 CodY helix-turn-helix domain CY96_18215 PF06018 CodY GAF-like domain CY96_18220 PF10431 C-terminal, D2-small domain, of ClpB protein CY96_18220 PF07724 AAA domain (Cdc48 subfamily) CY96_18220 PF00004 ATPase family associated with various cellular activities (AAA) CY96_18225 PF00227 Proteasome subunit CY96_18230 PF02899 Phage integrase, N-terminal SAM-like domain CY96_18230 PF00589 Phage integrase family CY96_18235 PF01134 Glucose inhibited division protein A CY96_18240 PF01131 DNA topoisomerase CY96_18240 PF01751 Toprim domain CY96_18240 PF01396 Topoisomerase DNA binding C4 zinc finger CY96_18245 PF02481 DNA recombination-mediator protein A CY96_18250 PF02629 CoA binding domain CY96_18250 PF00549 CoA-ligase CY96_18255 PF00549 CoA-ligase CY96_18255 PF08442 ATP-grasp domain CY96_18260 PF01351 Ribonuclease HII CY96_18265 PF01926 50S ribosome-binding GTPase CY96_18270 PF10502 Signal peptidase, peptidase S26 CY96_18275 PF01245 Ribosomal protein L19 CY96_18280 PF01746 tRNA (Guanine-1)-methyltransferase CY96_18285 PF05239 PRC-barrel domain CY96_18285 PF01782 RimM N-terminal domain CY96_18295 PF00886 Ribosomal protein S16 CY96_18300 PF00448 SRP54-type protein, GTPase domain CY96_18300 PF02881 SRP54-type protein, helical bundle domain CY96_18300 PF02978 Signal peptide binding domain CY96_18305 PF04297 Putative helix-turn-helix protein, YlxM / p13 like CY96_18310 PF00448 SRP54-type protein, GTPase domain CY96_18310 PF02881 SRP54-type protein, helical bundle domain CY96_18315 PF06470 SMC proteins Flexible Hinge Domain CY96_18315 PF02463 RecF/RecN/SMC N terminal domain CY96_18320 PF14622 Ribonuclease-III-like CY96_18320 PF00035 Double-stranded RNA binding motif CY96_18325 PF00550 Phosphopantetheine attachment site CY96_18335 PF00698 Acyl transferase domain CY96_18340 PF02504 Fatty acid synthesis protein CY96_18345 PF03061 Thioesterase superfamily CY96_18350 PF00270 DEAD/DEAH box helicase CY96_18350 PF00271 Helicase conserved C-terminal domain CY96_18350 PF17191 RecG wedge domain CY96_18355 PF02734 DAK2 domain CY96_18355 PF13684 Dihydroxyacetone kinase family CY96_18360 PF03780 Asp23 family, cell envelope-related function CY96_18365 PF00830 Ribosomal L28 family CY96_18375 PF04263 Thiamin pyrophosphokinase, catalytic domain CY96_18375 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain CY96_18380 PF00834 Ribulose-phosphate 3 epimerase family CY96_18385 PF03193 RsgA GTPase CY96_18385 PF16745 RsgA N-terminal domain CY96_18390 PF03793 PASTA domain CY96_18390 PF00069 Protein kinase domain CY96_18400 PF04055 Radical SAM superfamily CY96_18405 PF01029 NusB family CY96_18405 PF01189 16S rRNA methyltransferase RsmB/F CY96_18410 PF02911 Formyl transferase, C-terminal domain CY96_18410 PF00551 Formyl transferase CY96_18415 PF01327 Polypeptide deformylase CY96_18420 PF00271 Helicase conserved C-terminal domain CY96_18420 PF18074 Primosomal protein N C-terminal domain CY96_18420 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CY96_18420 PF17764 3′ DNA-binding domain (3′BD) CY96_18420 PF04851 Type III restriction enzyme, res subunit CY96_18425 PF04127 DNA / pantothenate metabolism flavoprotein CY96_18425 PF02441 Flavoprotein CY96_18430 PF01192 RNA polymerase Rpb6 CY96_18435 PF00625 Guanylate kinase CY96_18440 PF04025 Domain of unknown function (DUF370) CY96_18445 PF08340 Domain of unknown function (DUF1732) CY96_18445 PF03755 YicC-like family, N-terminal region CY96_18450 PF00689 Cation transporting ATPase, C-terminus CY96_18450 PF00690 Cation transporter/ATPase, N-terminus CY96_18460 PF01321 Creatinase/Prolidase N-terminal domain CY96_18460 PF00557 Metallopeptidase family M24 CY96_18480 PF13419 Haloacid dehalogenase-like hydrolase CY96_18485 PF00156 Phosphoribosyl transferase domain CY96_18490 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CY96_18495 PF01180 Dihydroorotate dehydrogenase CY96_18500 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CY96_18505 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CY96_18505 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CY96_18505 PF02142 MGS-like domain CY96_18510 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CY96_18510 PF00117 Glutamine amidotransferase class-I CY96_18515 PF01979 Amidohydrolase family CY96_18520 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CY96_18520 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CY96_18525 PF00860 Permease family CY96_18530 PF00156 Phosphoribosyl transferase domain CY96_18535 PF01479 S4 domain CY96_18535 PF00849 RNA pseudouridylate synthase CY96_18540 PF01252 Signal peptidase (SPase) II CY96_18550 PF08264 Anticodon-binding domain of tRNA CY96_18550 PF06827 Zinc finger found in FPG and IleRS CY96_18550 PF00133 tRNA synthetases class I (I, L, M and V) CY96_18555 PF05103 DivIVA protein CY96_18560 PF17774 Putative RNA-binding domain in YlmH CY96_18560 PF01479 S4 domain CY96_18565 PF02325 YGGT family CY96_18570 PF04472 Cell division protein SepF CY96_18575 PF01168 Alanine racemase, N-terminal domain CY96_18585 PF05239 PRC-barrel domain CY96_18590 PF04545 Sigma-70, region 4 CY96_18590 PF04539 Sigma-70 region 3 CY96_18590 PF04542 Sigma-70 region 2 CY96_18595 PF04545 Sigma-70, region 4 CY96_18595 PF04542 Sigma-70 region 2 CY96_18600 PF03419 Sporulation factor SpoIIGA CY96_18605 PF12327 FtsZ family, C-terminal domain CY96_18605 PF00091 Tubulin/FtsZ family, GTPase domain CY96_18610 PF02491 SHS2 domain inserted in FTSA CY96_18620 PF03799 Cell division protein FtsQ CY96_18620 PF08478 POTRA domain, FtsQ-type CY96_18625 PF01565 FAD binding domain CY96_18625 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CY96_18630 PF03033 Glycosyltransferase family 28 N-terminal domain CY96_18630 PF04101 Glycosyltransferase family 28 C-terminal domain CY96_18635 PF01098 Cell cycle protein CY96_18640 PF08245 Mur ligase middle domain CY96_18640 PF02875 Mur ligase family, glutamate ligase domain CY96_18645 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CY96_18645 PF00953 Glycosyl transferase family 4 CY96_18650 PF01225 Mur ligase family, catalytic domain CY96_18650 PF02875 Mur ligase family, glutamate ligase domain CY96_18650 PF08245 Mur ligase middle domain CY96_18655 PF00905 Penicillin binding protein transpeptidase domain CY96_18655 PF03793 PASTA domain CY96_18655 PF03717 Penicillin-binding Protein dimerisation domain CY96_18665 PF04977 Septum formation initiator CY96_18670 PF01795 MraW methylase family CY96_18675 PF10079 Bacillithiol biosynthesis BshC CY96_18680 PF02558 Ketopantoate reductase PanE/ApbA CY96_18680 PF08546 Ketopantoate reductase PanE/ApbA C terminal CY96_18685 PF00583 Acetyltransferase (GNAT) family CY96_18695 PF01783 Ribosomal L32p protein family CY96_18700 PF02620 Large ribosomal RNA subunit accumulation protein YceD CY96_18705 PF05636 HIGH Nucleotidyl Transferase CY96_18710 PF05362 Lon protease (S16) C-terminal proteolytic domain CY96_18710 PF13180 PDZ domain CY96_18715 PF01734 Patatin-like phospholipase CY96_18720 PF07670 Nucleoside recognition CY96_18725 PF01467 Cytidylyltransferase-like CY96_18740 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) CY96_18745 PF06133 Control of competence regulator ComK, YlbF/YmcA CY96_18750 PF00300 Histidine phosphatase superfamily (branch 1) CY96_18755 PF14003 YlbE-like protein CY96_18760 PF14071 Putative coat protein CY96_18765 PF14504 CAP-associated N-terminal CY96_18765 PF00188 Cysteine-rich secretory protein family CY96_18770 PF08868 YugN-like family CY96_18775 PF00795 Carbon-nitrogen hydrolase CY96_18780 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) CY96_18785 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CY96_18790 PF00510 Cytochrome c oxidase subunit III CY96_18795 PF00115 Cytochrome C and Quinol oxidase polypeptide I CY96_18800 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CY96_18800 PF00034 Cytochrome c CY96_18800 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CY96_18805 PF01040 UbiA prenyltransferase family CY96_18810 PF02628 Cytochrome oxidase assembly protein CY96_18815 PF02785 Biotin carboxylase C-terminal domain CY96_18815 PF02436 Conserved carboxylase domain CY96_18815 PF00364 Biotin-requiring enzyme CY96_18815 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CY96_18815 PF00682 HMGL-like CY96_18815 PF00289 Biotin carboxylase, N-terminal domain CY96_18820 PF01098 Cell cycle protein CY96_18825 PF07408 Protein of unknown function (DUF1507) CY96_18835 PF13638 PIN domain CY96_18835 PF02562 PhoH-like protein CY96_18845 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) CY96_18855 PF14036 YlaH-like protein CY96_18870 PF00459 Inositol monophosphatase family CY96_18880 PF06335 Protein of unknown function (DUF1054) CY96_18885 PF05256 Uncharacterised protein family (UPF0223) CY96_18890 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CY96_18890 PF01276 Orn/Lys/Arg decarboxylase, major domain CY96_18930 PF07992 Pyridine nucleotide-disulphide oxidoreductase CY96_18930 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CY96_18935 PF00364 Biotin-requiring enzyme CY96_18935 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CY96_18935 PF02817 e3 binding domain CY96_18940 PF02779 Transketolase, pyrimidine binding domain CY96_18940 PF02780 Transketolase, C-terminal domain CY96_18945 PF00676 Dehydrogenase E1 component CY96_18955 PF01327 Polypeptide deformylase CY96_18970 PF17770 Ribonuclease J C-terminal domain CY96_18970 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CY96_18970 PF00753 Metallo-beta-lactamase superfamily CY96_18975 PF02080 TrkA-C domain CY96_18975 PF02254 TrkA-N domain CY96_18985 PF07687 Peptidase dimerisation domain CY96_18985 PF01546 Peptidase family M20/M25/M40 CY96_18990 PF00132 Bacterial transferase hexapeptide (six repeats) CY96_18990 PF14602 Hexapeptide repeat of succinyl-transferase CY96_18990 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal CY96_18995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CY96_18995 PF03466 LysR substrate binding domain CY96_19010 PF04308 Ribonuclease H-like CY96_19020 PF08796 Protein of unknown function (DUF1797) CY96_19035 PF00563 EAL domain CY96_19035 PF10388 EAL-domain associated signalling protein domain CY96_19045 PF10518 TAT (twin-arginine translocation) pathway signal sequence CY96_19045 PF00149 Calcineurin-like phosphoesterase CY96_19055 PF13089 Polyphosphate kinase N-terminal domain CY96_19055 PF02503 Polyphosphate kinase middle domain CY96_19055 PF13090 Polyphosphate kinase C-terminal domain 2 CY96_19055 PF17941 Polyphosphate kinase C-terminal domain 1 CY96_19060 PF02541 Ppx/GppA phosphatase family CY96_19065 PF14177 YkyB-like protein CY96_19090 PF07690 Major Facilitator Superfamily CY96_19100 PF01717 Cobalamin-independent synthase, Catalytic domain CY96_19100 PF08267 Cobalamin-independent synthase, N-terminal domain CY96_19110 PF14040 Deoxyribonuclease NucA/NucB CY96_19120 PF00512 His Kinase A (phospho-acceptor) domain CY96_19120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_19130 PF00155 Aminotransferase class I and II CY96_19135 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CY96_19135 PF00356 Bacterial regulatory proteins, lacI family CY96_19140 PF00528 Binding-protein-dependent transport system inner membrane component CY96_19145 PF00528 Binding-protein-dependent transport system inner membrane component CY96_19150 PF13416 Bacterial extracellular solute-binding protein CY96_19155 PF16657 Maltogenic Amylase, C-terminal domain CY96_19155 PF02903 Alpha amylase, N-terminal ig-like domain CY96_19155 PF00128 Alpha amylase, catalytic domain CY96_19160 PF00128 Alpha amylase, catalytic domain CY96_19160 PF16657 Maltogenic Amylase, C-terminal domain CY96_19165 PF17912 MalK OB fold domain CY96_19165 PF03459 TOBE domain CY96_19165 PF00005 ABC transporter CY96_19205 PF00108 Thiolase, N-terminal domain CY96_19205 PF02803 Thiolase, C-terminal domain CY96_19210 PF00293 NUDIX domain CY96_19235 PF03551 Transcriptional regulator PadR-like family CY96_19255 PF01636 Phosphotransferase enzyme family CY96_19260 PF00795 Carbon-nitrogen hydrolase CY96_19265 PF00155 Aminotransferase class I and II CY96_19270 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain CY96_19270 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain CY96_19280 PF00596 Class II Aldolase and Adducin N-terminal domain CY96_19285 PF03079 ARD/ARD' family CY96_19300 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CY96_19300 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CY96_19305 PF00144 Beta-lactamase CY96_19310 PF00990 Diguanylate cyclase, GGDEF domain CY96_19315 PF00881 Nitroreductase family CY96_19330 PF05524 PEP-utilising enzyme, N-terminal CY96_19330 PF00391 PEP-utilising enzyme, mobile domain CY96_19330 PF02896 PEP-utilising enzyme, TIM barrel domain CY96_19335 PF00381 PTS HPr component phosphorylation site CY96_19340 PF02378 Phosphotransferase system, EIIC CY96_19340 PF00367 phosphotransferase system, EIIB CY96_19340 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CY96_19345 PF00874 PRD domain CY96_19345 PF03123 CAT RNA binding domain CY96_19360 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CY96_19365 PF01979 Amidohydrolase family CY96_19375 PF04079 Segregation and condensation complex subunit ScpB CY96_19380 PF02616 Segregation and condensation protein ScpA CY96_19390 PF03745 Domain of unknown function (DUF309) CY96_19395 PF00583 Acetyltransferase (GNAT) family CY96_19400 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CY96_19405 PF06207 Protein of unknown function (DUF1002) CY96_19415 PF03323 Bacillus/Clostridium GerA spore germination protein CY96_19420 PF14097 Stage V sporulation protein AE1 CY96_19425 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CY96_19430 PF07451 Stage V sporulation protein AD (SpoVAD) CY96_19435 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CY96_19440 PF13782 Stage V sporulation protein AB CY96_19445 PF12164 Stage V sporulation protein AA CY96_19455 PF00209 Sodium:neurotransmitter symporter family CY96_19460 PF04542 Sigma-70 region 2 CY96_19460 PF04539 Sigma-70 region 3 CY96_19460 PF04545 Sigma-70, region 4 CY96_19465 PF13581 Histidine kinase-like ATPase domain CY96_19470 PF01740 STAS domain CY96_19475 PF00768 D-alanyl-D-alanine carboxypeptidase CY96_19475 PF07943 Penicillin-binding protein 5, C-terminal domain CY96_19480 PF00392 Bacterial regulatory proteins, gntR family CY96_19485 PF00005 ABC transporter CY96_19500 PF01047 MarR family CY96_19510 PF00860 Permease family CY96_19515 PF01544 CorA-like Mg2+ transporter protein CY96_19520 PF00591 Glycosyl transferase family, a/b domain CY96_19520 PF02885 Glycosyl transferase family, helical bundle domain CY96_19520 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CY96_19525 PF01048 Phosphorylase superfamily CY96_19530 PF01676 Metalloenzyme superfamily CY96_19535 PF13115 YtkA-like CY96_19540 PF02899 Phage integrase, N-terminal SAM-like domain CY96_19540 PF00589 Phage integrase family CY96_19545 PF14004 Protein of unknown function (DUF4227) CY96_19550 PF01475 Ferric uptake regulator family CY96_19555 PF01944 Stage II sporulation protein M CY96_19565 PF00293 NUDIX domain CY96_19570 PF13072 Mother cell inhibitor of FtsZ CY96_19575 PF00248 Aldo/keto reductase family CY96_19580 PF00248 Aldo/keto reductase family CY96_19585 PF13673 Acetyltransferase (GNAT) domain CY96_19585 PF04229 GrpB protein CY96_19595 PF00149 Calcineurin-like phosphoesterase CY96_19595 PF00746 LPXTG cell wall anchor motif CY96_19595 PF00565 Staphylococcal nuclease homologue CY96_19595 PF02872 5'-nucleotidase, C-terminal domain CY96_19605 PF12146 Serine aminopeptidase, S33 CY96_19610 PF13726 Na+-H+ antiporter family CY96_19610 PF03553 Na+/H+ antiporter family CY96_19615 PF00356 Bacterial regulatory proteins, lacI family CY96_19620 PF00583 Acetyltransferase (GNAT) family CY96_19625 PF12146 Serine aminopeptidase, S33 CY96_19630 PF10827 Protein of unknown function (DUF2552) CY96_19640 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CY96_19640 PF01872 RibD C-terminal domain CY96_19645 PF00677 Lumazine binding domain CY96_19650 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CY96_19650 PF00925 GTP cyclohydrolase II CY96_19655 PF00885 6,7-dimethyl-8-ribityllumazine synthase CY96_19665 PF06968 Biotin and Thiamin Synthesis associated domain CY96_19665 PF04055 Radical SAM superfamily CY96_19670 PF13847 Methyltransferase domain CY96_19675 PF12697 Alpha/beta hydrolase family CY96_19675 PF08241 Methyltransferase domain CY96_19680 PF00155 Aminotransferase class I and II CY96_19690 PF00202 Aminotransferase class-III CY96_19705 PF02872 5'-nucleotidase, C-terminal domain CY96_19705 PF00149 Calcineurin-like phosphoesterase CY96_19715 PF13404 AsnC-type helix-turn-helix domain CY96_19715 PF01037 Lrp/AsnC ligand binding domain CY96_19730 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CY96_19730 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CY96_19735 PF00202 Aminotransferase class-III CY96_19740 PF00696 Amino acid kinase family CY96_19745 PF01960 ArgJ family CY96_19750 PF02774 Semialdehyde dehydrogenase, dimerisation domain CY96_19750 PF01118 Semialdehyde dehydrogenase, NAD binding domain CY96_19760 PF00106 short chain dehydrogenase CY96_19765 PF00753 Metallo-beta-lactamase superfamily CY96_19770 PF03807 NADP oxidoreductase coenzyme F420-dependent CY96_19770 PF14748 Pyrroline-5-carboxylate reductase dimerisation CY96_19775 PF03313 Serine dehydratase alpha chain CY96_19780 PF03315 Serine dehydratase beta chain CY96_19780 PF01842 ACT domain CY96_19790 PF00753 Metallo-beta-lactamase superfamily CY96_19790 PF12706 Beta-lactamase superfamily domain CY96_19805 PF00690 Cation transporter/ATPase, N-terminus CY96_19805 PF00689 Cation transporting ATPase, C-terminus CY96_19810 PF02308 MgtC family CY96_19815 PF00817 impB/mucB/samB family CY96_19815 PF11798 IMS family HHH motif CY96_19815 PF11799 impB/mucB/samB family C-terminal domain CY96_19820 PF07687 Peptidase dimerisation domain CY96_19820 PF01546 Peptidase family M20/M25/M40 CY96_19825 PF13302 Acetyltransferase (GNAT) domain CY96_19840 PF03734 L,D-transpeptidase catalytic domain CY96_19845 PF06081 Aromatic acid exporter family member 1 CY96_19845 PF11728 Putative aromatic acid exporter C-terminal domain CY96_19850 PF00005 ABC transporter CY96_19855 PF00528 Binding-protein-dependent transport system inner membrane component CY96_19860 PF00497 Bacterial extracellular solute-binding proteins, family 3 CY96_19865 PF06491 Disulphide isomerase CY96_19870 PF11208 Protein of unknown function (DUF2992) CY96_19875 PF00293 NUDIX domain CY96_19875 PF09297 NADH pyrophosphatase zinc ribbon domain CY96_19880 PF04239 Protein of unknown function (DUF421) CY96_19885 PF01098 Cell cycle protein CY96_19890 PF00364 Biotin-requiring enzyme CY96_19890 PF02817 e3 binding domain CY96_19890 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CY96_19895 PF02780 Transketolase, C-terminal domain CY96_19895 PF02779 Transketolase, pyrimidine binding domain CY96_19900 PF00676 Dehydrogenase E1 component CY96_19905 PF07992 Pyridine nucleotide-disulphide oxidoreductase CY96_19905 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CY96_19910 PF00871 Acetokinase family CY96_19915 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CY96_19915 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CY96_19920 PF01515 Phosphate acetyl/butaryl transferase CY96_19925 PF00158 Sigma-54 interaction domain CY96_19925 PF02954 Bacterial regulatory protein, Fis family CY96_19925 PF00989 PAS fold CY96_19935 PF03009 Glycerophosphoryl diester phosphodiesterase family CY96_20005 PF00239 Resolvase, N terminal domain CY96_20005 PF02796 Helix-turn-helix domain of resolvase CY96_20045 PF00072 Response regulator receiver domain CY96_20045 PF08769 Sporulation initiation factor Spo0A C terminal CY96_20050 PF17820 PDZ domain CY96_20050 PF05580 SpoIVB peptidase S55 CY96_20055 PF13476 AAA domain CY96_20060 PF02863 Arginine repressor, C-terminal domain CY96_20060 PF01316 Arginine repressor, DNA binding domain CY96_20065 PF01479 S4 domain CY96_20065 PF01728 FtsJ-like methyltransferase CY96_20070 PF02780 Transketolase, C-terminal domain CY96_20070 PF02779 Transketolase, pyrimidine binding domain CY96_20070 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CY96_20075 PF00348 Polyprenyl synthetase CY96_20080 PF02609 Exonuclease VII small subunit CY96_20085 PF02601 Exonuclease VII, large subunit CY96_20085 PF13742 OB-fold nucleic acid binding domain CY96_20090 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CY96_20090 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CY96_20095 PF01029 NusB family CY96_20100 PF03780 Asp23 family, cell envelope-related function CY96_20105 PF02785 Biotin carboxylase C-terminal domain CY96_20105 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CY96_20105 PF00289 Biotin carboxylase, N-terminal domain CY96_20110 PF00364 Biotin-requiring enzyme CY96_20115 PF12685 SpoIIIAH-like protein CY96_20125 PF09581 Stage III sporulation protein AF (Spore_III_AF) CY96_20130 PF09546 Stage III sporulation protein AE (spore_III_AE) CY96_20135 PF06686 Stage III sporulation protein AC/AD protein family CY96_20140 PF06686 Stage III sporulation protein AC/AD protein family CY96_20145 PF09548 Stage III sporulation protein AB (spore_III_AB) CY96_20170 PF09285 Elongation factor P, C-terminal CY96_20170 PF08207 Elongation factor P (EF-P) KOW-like domain CY96_20170 PF01132 Elongation factor P (EF-P) OB domain CY96_20175 PF01321 Creatinase/Prolidase N-terminal domain CY96_20175 PF00557 Metallopeptidase family M24 CY96_20180 PF01220 Dehydroquinase class II CY96_20185 PF11085 Conserved membrane protein YqhR CY96_20190 PF07136 Protein of unknown function (DUF1385) CY96_20200 PF13419 Haloacid dehalogenase-like hydrolase CY96_20205 PF02742 Iron dependent repressor, metal binding and dimerisation domain CY96_20205 PF01325 Iron dependent repressor, N-terminal DNA binding domain CY96_20225 PF03099 Biotin/lipoate A/B protein ligase family CY96_20230 PF00581 Rhodanese-like domain CY96_20240 PF00356 Bacterial regulatory proteins, lacI family CY96_20240 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CY96_20250 PF00893 Small Multidrug Resistance protein CY96_20255 PF00893 Small Multidrug Resistance protein CY96_20290 PF00392 Bacterial regulatory proteins, gntR family CY96_20305 PF02347 Glycine cleavage system P-protein CY96_20310 PF02347 Glycine cleavage system P-protein CY96_20315 PF01571 Aminomethyltransferase folate-binding domain CY96_20315 PF08669 Glycine cleavage T-protein C-terminal barrel domain CY96_20320 PF00271 Helicase conserved C-terminal domain CY96_20320 PF00176 SNF2 family N-terminal domain CY96_20325 PF11079 Bacterial protein YqhG of unknown function CY96_20345 PF14038 YqzE-like protein CY96_20350 PF01202 Shikimate kinase CY96_20385 PF00482 Type II secretion system (T2SS), protein F CY96_20390 PF00437 Type II/IV secretion system protein CY96_20400 PF11117 Protein of unknown function (DUF2626) CY96_20405 PF00375 Sodium:dicarboxylate symporter family CY96_20440 PF04101 Glycosyltransferase family 28 C-terminal domain CY96_20440 PF03033 Glycosyltransferase family 28 N-terminal domain CY96_20445 PF02965 Vitamin B12 dependent methionine synthase, activation domain CY96_20445 PF00809 Pterin binding enzyme CY96_20445 PF02607 B12 binding domain CY96_20445 PF02310 B12 binding domain CY96_20445 PF02574 Homocysteine S-methyltransferase CY96_20450 PF02219 Methylenetetrahydrofolate reductase CY96_20450 PF02574 Homocysteine S-methyltransferase CY96_20460 PF01053 Cys/Met metabolism PLP-dependent enzyme CY96_20465 PF01053 Cys/Met metabolism PLP-dependent enzyme CY96_20475 PF01022 Bacterial regulatory protein, arsR family CY96_20485 PF00753 Metallo-beta-lactamase superfamily CY96_20490 PF10958 Protein of unknown function (DUF2759) CY96_20495 PF00480 ROK family CY96_20500 PF06014 Bacterial protein of unknown function (DUF910) CY96_20505 PF01812 5-formyltetrahydrofolate cyclo-ligase family CY96_20510 PF00471 Ribosomal protein L33 CY96_20515 PF00483 Nucleotidyl transferase CY96_20520 PF01895 PhoU domain CY96_20525 PF00005 ABC transporter CY96_20530 PF00528 Binding-protein-dependent transport system inner membrane component CY96_20535 PF00528 Binding-protein-dependent transport system inner membrane component CY96_20540 PF12849 PBP superfamily domain CY96_20550 PF07690 Major Facilitator Superfamily CY96_20555 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CY96_20555 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CY96_20565 PF06691 Protein of unknown function (DUF1189) CY96_20575 PF04551 GcpE protein CY96_20580 PF01475 Ferric uptake regulator family CY96_20585 PF00950 ABC 3 transport family CY96_20590 PF00005 ABC transporter CY96_20595 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CY96_20595 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CY96_20600 PF11116 Protein of unknown function (DUF2624) CY96_20605 PF01261 Xylose isomerase-like TIM barrel CY96_20610 PF00270 DEAD/DEAH box helicase CY96_20610 PF00271 Helicase conserved C-terminal domain CY96_20620 PF02401 LytB protein CY96_20625 PF01784 NIF3 (NGG1p interacting factor 3) CY96_20630 PF04816 tRNA (adenine(22)-N(1))-methyltransferase CY96_20635 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CY96_20640 PF04545 Sigma-70, region 4 CY96_20640 PF04539 Sigma-70 region 3 CY96_20640 PF03979 Sigma-70 factor, region 1.1 CY96_20640 PF04542 Sigma-70 region 2 CY96_20640 PF00140 Sigma-70 factor, region 1.2 CY96_20645 PF08275 DNA primase catalytic core, N-terminal domain CY96_20645 PF01807 CHC2 zinc finger CY96_20645 PF10410 DnaB-helicase binding domain of primase CY96_20660 PF03618 Kinase/pyrophosphorylase CY96_20665 PF00571 CBS domain CY96_20665 PF08279 HTH domain CY96_20670 PF11967 Recombination protein O N terminal CY96_20670 PF02565 Recombination protein O C terminal CY96_20680 PF07650 KH domain CY96_20680 PF01926 50S ribosome-binding GTPase CY96_20685 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CY96_20690 PF01219 Prokaryotic diacylglycerol kinase CY96_20695 PF02130 Uncharacterized protein family UPF0054 CY96_20700 PF07698 7TM receptor with intracellular HD hydrolase CY96_20700 PF07697 7TM-HD extracellular CY96_20700 PF01966 HD domain CY96_20705 PF02562 PhoH-like protein CY96_20710 PF06898 Putative stage IV sporulation protein YqfD CY96_20715 PF07873 YabP family CY96_20720 PF09424 Yqey-like protein CY96_20725 PF01165 Ribosomal protein S21 CY96_20730 PF00919 Uncharacterized protein family UPF0004 CY96_20730 PF04055 Radical SAM superfamily CY96_20730 PF01938 TRAM domain CY96_20735 PF04452 RNA methyltransferase CY96_20745 PF00684 DnaJ central domain CY96_20745 PF01556 DnaJ C terminal domain CY96_20745 PF00226 DnaJ domain CY96_20750 PF00012 Hsp70 protein CY96_20755 PF01025 GrpE CY96_20760 PF01628 HrcA protein C terminal domain CY96_20765 PF04055 Radical SAM superfamily CY96_20765 PF06969 HemN C-terminal domain CY96_20770 PF01638 HxlR-like helix-turn-helix CY96_20775 PF03144 Elongation factor Tu domain 2 CY96_20775 PF00009 Elongation factor Tu GTP binding domain CY96_20775 PF00679 Elongation factor G C-terminus CY96_20775 PF06421 GTP-binding protein LepA C-terminus CY96_20785 PF03418 Germination protease CY96_20790 PF01649 Ribosomal protein S20 CY96_20795 PF06144 DNA polymerase III, delta subunit CY96_20800 PF14141 YqzM-like protein CY96_20805 PF13567 Domain of unknown function (DUF4131) CY96_20805 PF03772 Competence protein CY96_20805 PF00753 Metallo-beta-lactamase superfamily CY96_20810 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CY96_20815 PF10531 SLBB domain CY96_20820 PF03807 NADP oxidoreductase coenzyme F420-dependent CY96_20820 PF14748 Pyrroline-5-carboxylate reductase dimerisation CY96_20825 PF13649 Methyltransferase domain CY96_20835 PF01966 HD domain CY96_20840 PF01467 Cytidylyltransferase-like CY96_20845 PF01985 CRS1 / YhbY (CRM) domain CY96_20850 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CY96_20850 PF01488 Shikimate / quinate 5-dehydrogenase CY96_20850 PF08501 Shikimate dehydrogenase substrate binding domain CY96_20855 PF01926 50S ribosome-binding GTPase CY96_20870 PF02666 Phosphatidylserine decarboxylase CY96_20875 PF04542 Sigma-70 region 2 CY96_20875 PF04545 Sigma-70, region 4 CY96_20885 PF16244 Domain of unknown function (DUF4901) CY96_20890 PF00471 Ribosomal protein L33 CY96_20895 PF00881 Nitroreductase family CY96_20900 PF04607 Region found in RelA / SpoT proteins CY96_20910 PF00245 Alkaline phosphatase CY96_20915 PF00583 Acetyltransferase (GNAT) family CY96_20920 PF08386 TAP-like protein CY96_20920 PF00561 alpha/beta hydrolase fold CY96_20955 PF13860 FlgD Ig-like domain CY96_20955 PF05922 Peptidase inhibitor I9 CY96_20955 PF02225 PA domain CY96_20955 PF00082 Subtilase family CY96_20965 PF00351 Biopterin-dependent aromatic amino acid hydroxylase CY96_20975 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CY96_20980 PF07681 DoxX CY96_21010 PF00005 ABC transporter CY96_21015 PF01032 FecCD transport family CY96_21020 PF01497 Periplasmic binding protein CY96_21025 PF14143 YrhC-like protein CY96_21030 PF00171 Aldehyde dehydrogenase family CY96_21030 PF00465 Iron-containing alcohol dehydrogenase CY96_21035 PF01053 Cys/Met metabolism PLP-dependent enzyme CY96_21040 PF00291 Pyridoxal-phosphate dependent enzyme CY96_21045 PF01048 Phosphorylase superfamily CY96_21050 PF08241 Methyltransferase domain CY96_21065 PF00905 Penicillin binding protein transpeptidase domain CY96_21065 PF03717 Penicillin-binding Protein dimerisation domain CY96_21075 PF03449 Transcription elongation factor, N-terminal CY96_21075 PF01272 Transcription elongation factor, GreA/GreB, C-term CY96_21080 PF00485 Phosphoribulokinase / Uridine kinase family CY96_21100 PF02618 YceG-like family CY96_21105 PF06949 Protein of unknown function (DUF1292) CY96_21110 PF03652 Holliday junction resolvase CY96_21115 PF06135 IreB regulatory phosphoprotein CY96_21120 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CY96_21120 PF01411 tRNA synthetases class II (A) CY96_21120 PF02272 DHHA1 domain CY96_21130 PF01594 AI-2E family transporter CY96_21150 PF14490 Helix-hairpin-helix containing domain CY96_21150 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain CY96_21150 PF13538 UvrD-like helicase C-terminal domain CY96_21165 PF00266 Aminotransferase class-V CY96_21170 PF02082 Transcriptional regulator CY96_21175 PF16193 AAA C-terminal domain CY96_21175 PF12002 MgsA AAA+ ATPase C terminal CY96_21175 PF05496 Holliday junction DNA helicase RuvB P-loop domain CY96_21195 PF00899 ThiF family CY96_21200 PF00152 tRNA synthetases class II (D, K and N) CY96_21200 PF02938 GAD domain CY96_21200 PF01336 OB-fold nucleic acid binding domain CY96_21205 PF03129 Anticodon binding domain CY96_21205 PF13393 Histidyl-tRNA synthetase CY96_21215 PF02580 D-Tyr-tRNA(Tyr) deacylase CY96_21220 PF13291 ACT domain CY96_21220 PF02824 TGS domain CY96_21220 PF04607 Region found in RelA / SpoT proteins CY96_21225 PF00156 Phosphoribosyl transferase domain CY96_21230 PF17768 RecJ OB domain CY96_21230 PF10141 Single-strand DNA-specific exonuclease, C terminal domain CY96_21230 PF01368 DHH family CY96_21230 PF02272 DHHA1 domain CY96_21235 PF16916 Dimerisation domain of Zinc Transporter CY96_21235 PF01545 Cation efflux family CY96_21240 PF02355 Protein export membrane protein CY96_21240 PF07549 SecD/SecF GG Motif CY96_21245 PF13797 Post-transcriptional regulator CY96_21250 PF14667 Polysaccharide biosynthesis C-terminal domain CY96_21250 PF01943 Polysaccharide biosynthesis protein CY96_21255 PF04239 Protein of unknown function (DUF421) CY96_21265 PF02699 Preprotein translocase subunit CY96_21270 PF01702 Queuine tRNA-ribosyltransferase CY96_21275 PF02547 Queuosine biosynthesis protein CY96_21285 PF17864 RuvB AAA lid domain CY96_21285 PF05491 RuvB C-terminal winged helix domain CY96_21285 PF05496 Holliday junction DNA helicase RuvB P-loop domain CY96_21290 PF07499 RuvA, C-terminal domain CY96_21290 PF01330 RuvA N terminal domain CY96_21295 PF01497 Periplasmic binding protein CY96_21315 PF01476 LysM domain CY96_21320 PF02445 Quinolinate synthetase A protein CY96_21325 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CY96_21325 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CY96_21330 PF02910 Fumarate reductase flavoprotein C-term CY96_21330 PF00890 FAD binding domain CY96_21335 PF00266 Aminotransferase class-V CY96_21340 PF02829 3H domain CY96_21340 PF08279 HTH domain CY96_21345 PF03473 MOSC domain CY96_21345 PF03475 3-alpha domain CY96_21355 PF01842 ACT domain CY96_21355 PF00800 Prephenate dehydratase CY96_21360 PF02687 FtsX-like permease family CY96_21365 PF02687 FtsX-like permease family CY96_21370 PF00005 ABC transporter CY96_21375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_21380 PF00486 Transcriptional regulatory protein, C terminal CY96_21380 PF00072 Response regulator receiver domain CY96_21385 PF09269 Domain of unknown function (DUF1967) CY96_21385 PF01018 GTP1/OBG CY96_21385 PF01926 50S ribosome-binding GTPase CY96_21390 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CY96_21390 PF14682 Sporulation initiation phospho-transferase B, C-terminal CY96_21395 PF01016 Ribosomal L27 protein CY96_21400 PF04327 Cysteine protease Prp CY96_21405 PF00829 Ribosomal prokaryotic L21 protein CY96_21410 PF10150 Ribonuclease E/G family CY96_21410 PF00575 S1 RNA binding domain CY96_21415 PF02163 Peptidase family M50 CY96_21420 PF01551 Peptidase family M23 CY96_21425 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CY96_21430 PF03775 Septum formation inhibitor MinC, C-terminal domain CY96_21440 PF04085 rod shape-determining protein MreC CY96_21450 PF04002 RadC-like JAB domain CY96_21455 PF02545 Maf-like protein CY96_21465 PF08245 Mur ligase middle domain CY96_21465 PF02875 Mur ligase family, glutamate ligase domain CY96_21470 PF00133 tRNA synthetases class I (I, L, M and V) CY96_21470 PF08264 Anticodon-binding domain of tRNA CY96_21470 PF10458 Valyl tRNA synthetase tRNA binding arm CY96_21480 PF01476 LysM domain CY96_21485 PF00202 Aminotransferase class-III CY96_21490 PF00490 Delta-aminolevulinic acid dehydratase CY96_21495 PF02602 Uroporphyrinogen-III synthase HemD CY96_21500 PF03900 Porphobilinogen deaminase, C-terminal domain CY96_21500 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CY96_21505 PF01578 Cytochrome C assembly protein CY96_21510 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CY96_21510 PF01488 Shikimate / quinate 5-dehydrogenase CY96_21510 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CY96_21515 PF01047 MarR family CY96_21520 PF02566 OsmC-like protein CY96_21525 PF01926 50S ribosome-binding GTPase CY96_21530 PF02190 ATP-dependent protease La (LON) substrate-binding domain CY96_21530 PF05362 Lon protease (S16) C-terminal proteolytic domain CY96_21530 PF00004 ATPase family associated with various cellular activities (AAA) CY96_21535 PF05362 Lon protease (S16) C-terminal proteolytic domain CY96_21535 PF00004 ATPase family associated with various cellular activities (AAA) CY96_21540 PF07724 AAA domain (Cdc48 subfamily) CY96_21540 PF06689 ClpX C4-type zinc finger CY96_21540 PF10431 C-terminal, D2-small domain, of ClpB protein CY96_21545 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CY96_21545 PF05698 Bacterial trigger factor protein (TF) C-terminus CY96_21545 PF05697 Bacterial trigger factor protein (TF) CY96_21560 PF11724 YvbH-like oligomerisation region CY96_21560 PF08000 Bacterial PH domain CY96_21575 PF13181 Tetratricopeptide repeat CY96_21575 PF18801 response regulator aspartate phosphatase H, N terminal CY96_21605 PF12850 Calcineurin-like phosphoesterase superfamily domain CY96_21610 PF01725 Ham1 family CY96_21615 PF01138 3' exoribonuclease family, domain 1 CY96_21615 PF03725 3' exoribonuclease family, domain 2 CY96_21620 PF10646 Sporulation and spore germination CY96_21625 PF01177 Asp/Glu/Hydantoin racemase CY96_21635 PF00196 Bacterial regulatory proteins, luxR family CY96_21640 PF00860 Permease family CY96_21650 PF07969 Amidohydrolase family CY96_21655 PF04024 PspC domain CY96_21660 PF01381 Helix-turn-helix CY96_21660 PF07883 Cupin domain CY96_21665 PF13536 Putative multidrug resistance efflux transporter CY96_21670 PF00230 Major intrinsic protein CY96_21675 PF02082 Transcriptional regulator CY96_21685 PF13732 Domain of unknown function (DUF4162) CY96_21685 PF00005 ABC transporter CY96_21690 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) CY96_21695 PF00691 OmpA family CY96_21695 PF13677 Membrane MotB of proton-channel complex MotA/MotB CY96_21700 PF01618 MotA/TolQ/ExbB proton channel family CY96_21705 PF02557 D-alanyl-D-alanine carboxypeptidase CY96_21710 PF03061 Thioesterase superfamily CY96_21715 PF13085 2Fe-2S iron-sulfur cluster binding domain CY96_21715 PF13183 4Fe-4S dicluster domain CY96_21720 PF00890 FAD binding domain CY96_21720 PF02910 Fumarate reductase flavoprotein C-term CY96_21725 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CY96_21730 PF10702 Protein of unknown function (DUF2507) CY96_21735 PF01541 GIY-YIG catalytic domain CY96_21735 PF08459 UvrC Helix-hairpin-helix N-terminal CY96_21735 PF02151 UvrB/uvrC motif CY96_21740 PF00085 Thioredoxin CY96_21745 PF00766 Electron transfer flavoprotein FAD-binding domain CY96_21745 PF01012 Electron transfer flavoprotein domain CY96_21750 PF01012 Electron transfer flavoprotein domain CY96_21755 PF00378 Enoyl-CoA hydratase/isomerase CY96_21760 PF00440 Bacterial regulatory proteins, tetR family CY96_21760 PF08359 YsiA-like protein, C-terminal region CY96_21765 PF13193 AMP-binding enzyme C-terminal domain CY96_21765 PF00501 AMP-binding enzyme CY96_21775 PF01497 Periplasmic binding protein CY96_21780 PF01032 FecCD transport family CY96_21790 PF05163 DinB family CY96_21820 PF00005 ABC transporter CY96_21825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_21825 PF00512 His Kinase A (phospho-acceptor) domain CY96_21830 PF00486 Transcriptional regulatory protein, C terminal CY96_21830 PF00072 Response regulator receiver domain CY96_21840 PF09962 Uncharacterized conserved protein (DUF2196) CY96_21845 PF10672 S-adenosylmethionine-dependent methyltransferase CY96_21845 PF17785 PUA-like domain CY96_21850 PF03992 Antibiotic biosynthesis monooxygenase CY96_21855 PF04203 Sortase domain CY96_21860 PF00005 ABC transporter CY96_21865 PF01032 FecCD transport family CY96_21870 PF01497 Periplasmic binding protein CY96_21875 PF05031 Iron Transport-associated domain CY96_21885 PF05031 Iron Transport-associated domain CY96_21890 PF05525 Branched-chain amino acid transport protein CY96_21895 PF00849 RNA pseudouridylate synthase CY96_21895 PF01479 S4 domain CY96_21905 PF00488 MutS domain V CY96_21905 PF01713 Smr domain CY96_21910 PF14716 Helix-hairpin-helix domain CY96_21910 PF14791 DNA polymerase beta thumb CY96_21910 PF02811 PHP domain CY96_21915 PF02674 Colicin V production protein CY96_21920 PF05164 Cell division protein ZapA CY96_21925 PF01351 Ribonuclease HII CY96_21925 PF11858 Domain of unknown function (DUF3378) CY96_21945 PF01336 OB-fold nucleic acid binding domain CY96_21945 PF00152 tRNA synthetases class II (D, K and N) CY96_21950 PF03147 Ferredoxin-fold anticodon binding domain CY96_21950 PF01588 Putative tRNA binding domain CY96_21950 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CY96_21950 PF03484 tRNA synthetase B5 domain CY96_21950 PF03483 B3/4 domain CY96_21955 PF01409 tRNA synthetases class II core domain (F) CY96_21955 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CY96_21960 PF08032 RNA 2'-O ribose methyltransferase substrate binding CY96_21960 PF00588 SpoU rRNA Methylase family CY96_21965 PF14098 Small, acid-soluble spore protein I CY96_21970 PF01966 HD domain CY96_21990 PF07690 Major Facilitator Superfamily CY96_22000 PF00440 Bacterial regulatory proteins, tetR family CY96_22000 PF16859 Tetracyclin repressor-like, C-terminal domain CY96_22005 PF05343 M42 glutamyl aminopeptidase CY96_22015 PF00453 Ribosomal protein L20 CY96_22020 PF01632 Ribosomal protein L35 CY96_22025 PF00707 Translation initiation factor IF-3, C-terminal domain CY96_22025 PF05198 Translation initiation factor IF-3, N-terminal domain CY96_22030 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CY96_22030 PF03129 Anticodon binding domain CY96_22030 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CY96_22030 PF02824 TGS domain CY96_22035 PF08812 YtxC-like family CY96_22040 PF13783 Domain of unknown function (DUF4177) CY96_22045 PF01695 IstB-like ATP binding protein CY96_22045 PF07319 Primosomal protein DnaI N-terminus CY96_22050 PF07261 Replication initiation and membrane attachment CY96_22055 PF03477 ATP cone domain CY96_22060 PF02675 S-adenosylmethionine decarboxylase CY96_22065 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CY96_22065 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CY96_22070 PF01121 Dephospho-CoA kinase CY96_22075 PF02659 Putative manganese efflux pump CY96_22080 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CY96_22080 PF06827 Zinc finger found in FPG and IleRS CY96_22080 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CY96_22085 PF00476 DNA polymerase family A CY96_22085 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CY96_22085 PF01367 5'-3' exonuclease, C-terminal SAM fold CY96_22090 PF16736 Single Cache-like CY96_22090 PF00989 PAS fold CY96_22090 PF00512 His Kinase A (phospho-acceptor) domain CY96_22090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_22095 PF00486 Transcriptional regulatory protein, C terminal CY96_22095 PF00072 Response regulator receiver domain CY96_22115 PF00056 lactate/malate dehydrogenase, NAD binding domain CY96_22115 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CY96_22120 PF00180 Isocitrate/isopropylmalate dehydrogenase CY96_22125 PF00285 Citrate synthase, C-terminal domain CY96_22130 PF04284 Protein of unknown function (DUF441) CY96_22135 PF01594 AI-2E family transporter CY96_22140 PF04186 FxsA cytoplasmic membrane protein CY96_22145 PF00391 PEP-utilising enzyme, mobile domain CY96_22145 PF00224 Pyruvate kinase, barrel domain CY96_22145 PF02887 Pyruvate kinase, alpha/beta domain CY96_22150 PF00365 Phosphofructokinase CY96_22155 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CY96_22160 PF01039 Carboxyl transferase domain CY96_22160 PF17848 Acetyl-coA carboxylase zinc finger domain CY96_22165 PF00392 Bacterial regulatory proteins, gntR family CY96_22170 PF03949 Malic enzyme, NAD binding domain CY96_22170 PF00390 Malic enzyme, N-terminal domain CY96_22175 PF02811 PHP domain CY96_22175 PF01336 OB-fold nucleic acid binding domain CY96_22175 PF14579 Helix-hairpin-helix motif CY96_22175 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CY96_22175 PF07733 Bacterial DNA polymerase III alpha NTPase domain CY96_22180 PF14034 Sporulation protein YtrH CY96_22190 PF02272 DHHA1 domain CY96_22190 PF01368 DHH family CY96_22195 PF14007 YtpI-like protein CY96_22205 PF00392 Bacterial regulatory proteins, gntR family CY96_22205 PF07085 DRTGG domain CY96_22205 PF00571 CBS domain CY96_22205 PF03061 Thioesterase superfamily CY96_22220 PF01321 Creatinase/Prolidase N-terminal domain CY96_22220 PF00557 Metallopeptidase family M24 CY96_22250 PF07883 Cupin domain CY96_22260 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CY96_22260 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CY96_22270 PF00582 Universal stress protein family CY96_22285 PF00206 Lyase CY96_22285 PF14698 Argininosuccinate lyase C-terminal CY96_22290 PF00764 Arginosuccinate synthase CY96_22310 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CY96_22310 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CY96_22315 PF12787 EcsC protein family CY96_22330 PF00871 Acetokinase family CY96_22335 PF02384 N-6 DNA Methylase CY96_22340 PF08534 Redoxin CY96_22345 PF09579 Sporulation protein YtfJ (Spore_YtfJ) CY96_22355 PF01513 ATP-NAD kinase CY96_22360 PF07969 Amidohydrolase family CY96_22370 PF00501 AMP-binding enzyme CY96_22370 PF13193 AMP-binding enzyme C-terminal domain CY96_22375 PF00269 Small, acid-soluble spore proteins, alpha/beta type CY96_22380 PF02926 THUMP domain CY96_22380 PF02568 Thiamine biosynthesis protein (ThiI) CY96_22385 PF00266 Aminotransferase class-V CY96_22390 PF06160 Septation ring formation regulator, EzrA CY96_22395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CY96_22395 PF03466 LysR substrate binding domain CY96_22400 PF00892 EamA-like transporter family CY96_22405 PF00440 Bacterial regulatory proteins, tetR family CY96_22410 PF13185 GAF domain CY96_22415 PF01053 Cys/Met metabolism PLP-dependent enzyme CY96_22420 PF00163 Ribosomal protein S4/S9 N-terminal domain CY96_22420 PF01479 S4 domain CY96_22460 PF00579 tRNA synthetases class I (W and Y) CY96_22460 PF01479 S4 domain CY96_22470 PF04542 Sigma-70 region 2 CY96_22470 PF08281 Sigma-70, region 4 CY96_22480 PF14602 Hexapeptide repeat of succinyl-transferase CY96_22480 PF12464 Maltose acetyltransferase CY96_22485 PF00501 AMP-binding enzyme CY96_22485 PF13193 AMP-binding enzyme C-terminal domain CY96_22490 PF00583 Acetyltransferase (GNAT) family CY96_22495 PF00571 CBS domain CY96_22500 PF00850 Histone deacetylase domain CY96_22515 PF00486 Transcriptional regulatory protein, C terminal CY96_22515 PF00072 Response regulator receiver domain CY96_22520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_22520 PF16736 Single Cache-like CY96_22520 PF00989 PAS fold CY96_22520 PF00512 His Kinase A (phospho-acceptor) domain CY96_22525 PF12796 Ankyrin repeats (3 copies) CY96_22530 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CY96_22535 PF01741 Large-conductance mechanosensitive channel, MscL CY96_22550 PF00356 Bacterial regulatory proteins, lacI family CY96_22555 PF01817 Chorismate mutase type II CY96_22555 PF00793 DAHP synthetase I family CY96_22560 PF07537 CamS sex pheromone cAM373 precursor CY96_22565 PF11009 Protein of unknown function (DUF2847) CY96_22575 PF02073 Thermophilic metalloprotease (M29) CY96_22590 PF13302 Acetyltransferase (GNAT) domain CY96_22595 PF02875 Mur ligase family, glutamate ligase domain CY96_22595 PF01225 Mur ligase family, catalytic domain CY96_22595 PF08245 Mur ligase middle domain CY96_22605 PF09397 Ftsk gamma domain CY96_22605 PF01580 FtsK/SpoIIIE family CY96_22605 PF17854 FtsK alpha domain CY96_22610 PF08239 Bacterial SH3 domain CY96_22610 PF01520 N-acetylmuramoyl-L-alanine amidase CY96_22620 PF14794 Domain of unknown function (DUF4479) CY96_22620 PF01588 Putative tRNA binding domain CY96_22625 PF07285 Protein of unknown function (DUF1444) CY96_22630 PF00085 Thioredoxin CY96_22635 PF01931 Protein of unknown function DUF84 CY96_22640 PF05343 M42 glutamyl aminopeptidase CY96_22650 PF00753 Metallo-beta-lactamase superfamily CY96_22655 PF02390 Putative methyltransferase CY96_22660 PF14165 YtzH-like protein CY96_22665 PF01636 Phosphotransferase enzyme family CY96_22670 PF00128 Alpha amylase, catalytic domain CY96_22670 PF17999 Pullulanase N1-terminal domain CY96_22670 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CY96_22675 PF02834 LigT like Phosphoesterase CY96_22680 PF01546 Peptidase family M20/M25/M40 CY96_22685 PF08220 DeoR-like helix-turn-helix domain CY96_22690 PF01479 S4 domain CY96_22690 PF00849 RNA pseudouridylate synthase CY96_22695 PF14667 Polysaccharide biosynthesis C-terminal domain CY96_22695 PF01943 Polysaccharide biosynthesis protein CY96_22705 PF07690 Major Facilitator Superfamily CY96_22710 PF01022 Bacterial regulatory protein, arsR family CY96_22715 PF08327 Activator of Hsp90 ATPase homolog 1-like protein CY96_22725 PF10957 Sporulation protein Cse60 CY96_22735 PF02559 CarD-like/TRCF domain CY96_22745 PF06800 Sugar transport protein CY96_22760 PF02391 MoaE protein CY96_22765 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CY96_22770 PF03453 MoeA N-terminal region (domain I and II) CY96_22770 PF00994 Probable molybdopterin binding domain CY96_22770 PF03454 MoeA C-terminal region (domain IV) CY96_22775 PF01967 MoaC family CY96_22780 PF00899 ThiF family CY96_22785 PF04055 Radical SAM superfamily CY96_22785 PF06463 Molybdenum Cofactor Synthesis C CY96_22810 PF00581 Rhodanese-like domain CY96_22820 PF00561 alpha/beta hydrolase fold CY96_22825 PF03323 Bacillus/Clostridium GerA spore germination protein CY96_22830 PF03845 Spore germination protein CY96_22860 PF00133 tRNA synthetases class I (I, L, M and V) CY96_22860 PF13603 Leucyl-tRNA synthetase, Domain 2 CY96_22860 PF08264 Anticodon-binding domain of tRNA CY96_22860 PF09334 tRNA synthetases class I (M) CY96_22865 PF07690 Major Facilitator Superfamily CY96_22870 PF00999 Sodium/hydrogen exchanger family CY96_22875 PF02080 TrkA-C domain CY96_22880 PF00589 Phage integrase family CY96_22890 PF00005 ABC transporter CY96_22895 PF04235 Protein of unknown function (DUF418) CY96_22895 PF07786 Protein of unknown function (DUF1624) CY96_22905 PF10732 Protein of unknown function (DUF2524) CY96_22910 PF16199 Radical_SAM C-terminal domain CY96_22910 PF04055 Radical SAM superfamily CY96_22915 PF06962 Putative rRNA methylase CY96_22920 PF01177 Asp/Glu/Hydantoin racemase CY96_22945 PF10776 Protein of unknown function (DUF2600) CY96_22950 PF12146 Serine aminopeptidase, S33 CY96_22955 PF00132 Bacterial transferase hexapeptide (six repeats) CY96_22960 PF01569 PAP2 superfamily CY96_22965 PF00534 Glycosyl transferases group 1 CY96_22965 PF13439 Glycosyltransferase Family 4 CY96_22970 PF12804 MobA-like NTP transferase domain CY96_22975 PF00994 Probable molybdopterin binding domain CY96_22990 PF13302 Acetyltransferase (GNAT) domain CY96_22995 PF02773 S-adenosylmethionine synthetase, C-terminal domain CY96_22995 PF00438 S-adenosylmethionine synthetase, N-terminal domain CY96_22995 PF02772 S-adenosylmethionine synthetase, central domain CY96_23000 PF01293 Phosphoenolpyruvate carboxykinase CY96_23030 PF00512 His Kinase A (phospho-acceptor) domain CY96_23030 PF13426 PAS domain CY96_23030 PF00989 PAS fold CY96_23030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_23030 PF13188 PAS domain CY96_23035 PF00512 His Kinase A (phospho-acceptor) domain CY96_23035 PF02743 Cache domain CY96_23035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_23040 PF00561 alpha/beta hydrolase fold CY96_23040 PF08386 TAP-like protein CY96_23045 PF00884 Sulfatase CY96_23070 PF00005 ABC transporter CY96_23075 PF00528 Binding-protein-dependent transport system inner membrane component CY96_23090 PF13419 Haloacid dehalogenase-like hydrolase CY96_23100 PF00293 NUDIX domain CY96_23130 PF00893 Small Multidrug Resistance protein CY96_23135 PF00893 Small Multidrug Resistance protein CY96_23140 PF09278 MerR, DNA binding CY96_23140 PF00376 MerR family regulatory protein CY96_23145 PF02664 S-Ribosylhomocysteinase (LuxS) CY96_23150 PF01809 Putative membrane protein insertion efficiency factor CY96_23155 PF00484 Carbonic anhydrase CY96_23160 PF01654 Cytochrome bd terminal oxidase subunit I CY96_23165 PF02322 Cytochrome bd terminal oxidase subunit II CY96_23170 PF10676 Spore germination protein gerPA/gerPF CY96_23180 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CY96_23180 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CY96_23200 PF04012 PspA/IM30 family CY96_23215 PF07664 Ferrous iron transport protein B C terminus CY96_23215 PF17910 FeoB cytosolic helical domain CY96_23215 PF02421 Ferrous iron transport protein B CY96_23215 PF07670 Nucleoside recognition CY96_23225 PF09515 Thiamine transporter protein (Thia_YuaJ) CY96_23230 PF00672 HAMP domain CY96_23230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_23230 PF00512 His Kinase A (phospho-acceptor) domain CY96_23235 PF00072 Response regulator receiver domain CY96_23235 PF00486 Transcriptional regulatory protein, C terminal CY96_23265 PF00781 Diacylglycerol kinase catalytic domain CY96_23295 PF09335 SNARE associated Golgi protein CY96_23300 PF00398 Ribosomal RNA adenine dimethylase CY96_23305 PF02687 FtsX-like permease family CY96_23310 PF00005 ABC transporter CY96_23315 PF12833 Helix-turn-helix domain CY96_23315 PF06445 GyrI-like small molecule binding domain CY96_23325 PF00005 ABC transporter CY96_23330 PF07853 Protein of unknown function (DUF1648) CY96_23330 PF13630 SdpI/YhfL protein family CY96_23335 PF01022 Bacterial regulatory protein, arsR family CY96_23340 PF00486 Transcriptional regulatory protein, C terminal CY96_23340 PF00072 Response regulator receiver domain CY96_23345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_23350 PF02687 FtsX-like permease family CY96_23355 PF02687 FtsX-like permease family CY96_23360 PF00005 ABC transporter CY96_23365 PF02687 FtsX-like permease family CY96_23375 PF02447 GntP family permease CY96_23390 PF07071 KDGP aldolase CY96_23395 PF03841 L-seryl-tRNA selenium transferase CY96_23400 PF01979 Amidohydrolase family CY96_23405 PF02557 D-alanyl-D-alanine carboxypeptidase CY96_23410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_23410 PF00512 His Kinase A (phospho-acceptor) domain CY96_23415 PF00486 Transcriptional regulatory protein, C terminal CY96_23415 PF00072 Response regulator receiver domain CY96_23420 PF13378 Enolase C-terminal domain-like CY96_23420 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CY96_23425 PF00501 AMP-binding enzyme CY96_23425 PF13193 AMP-binding enzyme C-terminal domain CY96_23430 PF00378 Enoyl-CoA hydratase/isomerase CY96_23435 PF12697 Alpha/beta hydrolase family CY96_23440 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CY96_23440 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CY96_23440 PF16582 Middle domain of thiamine pyrophosphate CY96_23445 PF00425 chorismate binding enzyme CY96_23455 PF01040 UbiA prenyltransferase family CY96_23460 PF01258 Prokaryotic dksA/traR C4-type zinc finger CY96_23465 PF00313 'Cold-shock' DNA-binding domain CY96_23490 PF00343 Carbohydrate phosphorylase CY96_23495 PF08323 Starch synthase catalytic domain CY96_23495 PF00534 Glycosyl transferases group 1 CY96_23500 PF00483 Nucleotidyl transferase CY96_23505 PF00483 Nucleotidyl transferase CY96_23510 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CY96_23510 PF02806 Alpha amylase, C-terminal all-beta domain CY96_23510 PF00128 Alpha amylase, catalytic domain CY96_23520 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CY96_23520 PF00056 lactate/malate dehydrogenase, NAD binding domain CY96_23615 PF05697 Bacterial trigger factor protein (TF) CY96_23615 PF05698 Bacterial trigger factor protein (TF) C-terminus CY96_23650 PF02308 MgtC family CY96_23655 PF02254 TrkA-N domain CY96_23655 PF07885 Ion channel CY96_23660 PF08868 YugN-like family CY96_23665 PF00342 Phosphoglucose isomerase CY96_23670 PF04070 Domain of unknown function (DUF378) CY96_23675 PF00575 S1 RNA binding domain CY96_23680 PF00155 Aminotransferase class I and II CY96_23685 PF01037 Lrp/AsnC ligand binding domain CY96_23690 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CY96_23690 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CY96_23695 PF00561 alpha/beta hydrolase fold CY96_23695 PF08386 TAP-like protein CY96_23705 PF00155 Aminotransferase class I and II CY96_23720 PF08810 Kinase associated protein B CY96_23725 PF00929 Exonuclease CY96_23730 PF03600 Citrate transporter CY96_23745 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CY96_23745 PF03129 Anticodon binding domain CY96_23750 PF03061 Thioesterase superfamily CY96_23760 PF02632 BioY family CY96_23765 PF00483 Nucleotidyl transferase CY96_23770 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CY96_23770 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CY96_23770 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CY96_23770 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CY96_23775 PF10372 Bacterial membrane-spanning protein N-terminus CY96_23775 PF02457 DisA bacterial checkpoint controller nucleotide-binding CY96_23780 PF00883 Cytosol aminopeptidase family, catalytic domain CY96_23780 PF02789 Cytosol aminopeptidase family, N-terminal domain CY96_23785 PF06725 3D domain CY96_23795 PF13344 Haloacid dehalogenase-like hydrolase CY96_23795 PF00293 NUDIX domain CY96_23800 PF07992 Pyridine nucleotide-disulphide oxidoreductase CY96_23805 PF07992 Pyridine nucleotide-disulphide oxidoreductase CY96_23815 PF06445 GyrI-like small molecule binding domain CY96_23830 PF04463 Protein of unknown function (DUF523) CY96_23845 PF01521 Iron-sulphur cluster biosynthesis CY96_23850 PF01678 Diaminopimelate epimerase CY96_23855 PF07293 Protein of unknown function (DUF1450) CY96_23860 PF07992 Pyridine nucleotide-disulphide oxidoreductase CY96_23865 PF03412 Peptidase C39 family CY96_23865 PF00005 ABC transporter CY96_23865 PF00664 ABC transporter transmembrane region CY96_23870 PF03649 Uncharacterised protein family (UPF0014) CY96_23875 PF03831 PhnA domain CY96_23875 PF08274 PhnA Zinc-Ribbon CY96_23930 PF07315 Protein of unknown function (DUF1462) CY96_23935 PF01106 NifU-like domain CY96_23950 PF04608 Phosphatidylglycerophosphatase A CY96_23970 PF15608 PELOTA RNA binding domain CY96_23970 PF11202 Phosphoribosyl transferase (PRTase) CY96_23985 PF02525 Flavodoxin-like fold CY96_23990 PF13344 Haloacid dehalogenase-like hydrolase CY96_24000 PF01934 Protein of unknown function DUF86 CY96_24005 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CY96_24020 PF06265 Protein of unknown function (DUF1027) CY96_24025 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) CY96_24030 PF07739 TipAS antibiotic-recognition domain CY96_24030 PF13411 MerR HTH family regulatory protein CY96_24035 PF10086 YhfC intramembrane metalloprotease CY96_24055 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CY96_24055 PF04055 Radical SAM superfamily CY96_24060 PF01551 Peptidase family M23 CY96_24065 PF09560 Sporulation protein YunB (Spo_YunB) CY96_24070 PF08827 Domain of unknown function (DUF1805) CY96_24075 PF02872 5'-nucleotidase, C-terminal domain CY96_24080 PF01458 Uncharacterized protein family (UPF0051) CY96_24085 PF01592 NifU-like N terminal domain CY96_24090 PF00266 Aminotransferase class-V CY96_24095 PF01458 Uncharacterized protein family (UPF0051) CY96_24100 PF00005 ABC transporter CY96_24105 PF03180 NLPA lipoprotein CY96_24110 PF00528 Binding-protein-dependent transport system inner membrane component CY96_24115 PF00005 ABC transporter CY96_24115 PF09383 NIL domain CY96_24125 PF00085 Thioredoxin CY96_24130 PF01751 Toprim domain CY96_24135 PF01597 Glycine cleavage H-protein CY96_24140 PF03960 ArsC family CY96_24160 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CY96_24160 PF00056 lactate/malate dehydrogenase, NAD binding domain CY96_24180 PF13305 Tetracyclin repressor-like, C-terminal domain CY96_24180 PF00440 Bacterial regulatory proteins, tetR family CY96_24185 PF00753 Metallo-beta-lactamase superfamily CY96_24190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CY96_24190 PF02770 Acyl-CoA dehydrogenase, middle domain CY96_24190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CY96_24195 PF00108 Thiolase, N-terminal domain CY96_24195 PF02803 Thiolase, C-terminal domain CY96_24200 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CY96_24200 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CY96_24200 PF00378 Enoyl-CoA hydratase/isomerase CY96_24210 PF00768 D-alanyl-D-alanine carboxypeptidase CY96_24210 PF07943 Penicillin-binding protein 5, C-terminal domain CY96_24215 PF01619 Proline dehydrogenase CY96_24220 PF10835 Protein of unknown function (DUF2573) CY96_24225 PF01910 Thiamine-binding protein CY96_24230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CY96_24230 PF00672 HAMP domain CY96_24230 PF02743 Cache domain CY96_24245 PF07690 Major Facilitator Superfamily CY96_24250 PF13520 Amino acid permease CY96_24265 PF02096 60Kd inner membrane protein CY96_24275 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CY96_24275 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CY96_24310 PF09335 SNARE associated Golgi protein CY96_24320 PF03734 L,D-transpeptidase catalytic domain CY96_24320 PF17969 L,D-transpeptidase C-terminal domain CY96_24325 PF00486 Transcriptional regulatory protein, C terminal CY96_24325 PF00072 Response regulator receiver domain CY96_24330 PF16736 Single Cache-like CY96_24330 PF00989 PAS fold CY96_24330 PF00512 His Kinase A (phospho-acceptor) domain CY96_24330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_24345 PF08264 Anticodon-binding domain of tRNA CY96_24345 PF09334 tRNA synthetases class I (M) CY96_24355 PF02743 Cache domain CY96_24355 PF00672 HAMP domain CY96_24355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CY96_24360 PF00672 HAMP domain CY96_24360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CY96_24360 PF02743 Cache domain CY96_24365 PF01883 Iron-sulfur cluster assembly protein CY96_24370 PF07504 Fungalysin/Thermolysin Propeptide Motif CY96_24370 PF03413 Peptidase propeptide and YPEB domain CY96_24370 PF01447 Thermolysin metallopeptidase, catalytic domain CY96_24370 PF02868 Thermolysin metallopeptidase, alpha-helical domain CY96_24375 PF17954 Quercetinase C-terminal cupin domain CY96_24375 PF02678 Pirin CY96_24380 PF01047 MarR family CY96_24390 PF09335 SNARE associated Golgi protein CY96_24395 PF00999 Sodium/hydrogen exchanger family CY96_24400 PF02080 TrkA-C domain CY96_24410 PF01235 Sodium:alanine symporter family CY96_24430 PF03641 Possible lysine decarboxylase CY96_24440 PF00210 Ferritin-like domain CY96_24445 PF04235 Protein of unknown function (DUF418) CY96_24450 PF07662 Na+ dependent nucleoside transporter C-terminus CY96_24450 PF01773 Na+ dependent nucleoside transporter N-terminus CY96_24455 PF01773 Na+ dependent nucleoside transporter N-terminus CY96_24455 PF07662 Na+ dependent nucleoside transporter C-terminus CY96_24460 PF01235 Sodium:alanine symporter family CY96_24465 PF01235 Sodium:alanine symporter family CY96_24470 PF13460 NAD(P)H-binding CY96_24490 PF00248 Aldo/keto reductase family CY96_24495 PF07690 Major Facilitator Superfamily CY96_24500 PF01638 HxlR-like helix-turn-helix CY96_24505 PF07849 Protein of unknown function (DUF1641) CY96_24510 PF07992 Pyridine nucleotide-disulphide oxidoreductase CY96_24515 PF01479 S4 domain CY96_24515 PF00579 tRNA synthetases class I (W and Y) CY96_24520 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CY96_24520 PF01565 FAD binding domain CY96_24530 PF17202 Single cache domain 3 CY96_24530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CY96_24530 PF00672 HAMP domain CY96_24540 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CY96_24545 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CY96_24560 PF07690 Major Facilitator Superfamily CY96_24565 PF12848 ABC transporter CY96_24565 PF00005 ABC transporter CY96_24570 PF13302 Acetyltransferase (GNAT) domain CY96_24575 PF06146 Phosphate-starvation-inducible E CY96_24590 PF01289 Thiol-activated cytolysin CY96_24590 PF17440 Thiol-activated cytolysin beta sandwich domain CY96_24600 PF00005 ABC transporter CY96_24605 PF01032 FecCD transport family CY96_24610 PF01032 FecCD transport family CY96_24620 PF00072 Response regulator receiver domain CY96_24620 PF00486 Transcriptional regulatory protein, C terminal CY96_24625 PF01668 SmpB protein CY96_24640 PF00773 RNB domain CY96_24640 PF17876 Cold shock domain CY96_24640 PF00575 S1 RNA binding domain CY96_24640 PF08206 Ribonuclease B OB domain CY96_24645 PF12146 Serine aminopeptidase, S33 CY96_24650 PF03840 Preprotein translocase SecG subunit CY96_24655 PF04172 LrgB-like family CY96_24660 PF03788 LrgA family CY96_24665 PF01156 Inosine-uridine preferring nucleoside hydrolase CY96_24670 PF03952 Enolase, N-terminal domain CY96_24670 PF00113 Enolase, C-terminal TIM barrel domain CY96_24675 PF01676 Metalloenzyme superfamily CY96_24675 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CY96_24680 PF00121 Triosephosphate isomerase CY96_24685 PF00162 Phosphoglycerate kinase CY96_24690 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CY96_24690 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CY96_24695 PF04198 Putative sugar-binding domain CY96_24705 PF04963 Sigma-54 factor, core binding domain CY96_24705 PF00309 Sigma-54 factor, Activator interacting domain (AID) CY96_24705 PF04552 Sigma-54, DNA binding domain CY96_24720 PF13732 Domain of unknown function (DUF4162) CY96_24720 PF00005 ABC transporter CY96_24725 PF07730 Histidine kinase CY96_24725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_24730 PF00072 Response regulator receiver domain CY96_24730 PF00196 Bacterial regulatory proteins, luxR family CY96_24750 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CY96_24755 PF07451 Stage V sporulation protein AD (SpoVAD) CY96_24760 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CY96_24770 PF04239 Protein of unknown function (DUF421) CY96_24775 PF00574 Clp protease CY96_24790 PF00381 PTS HPr component phosphorylation site CY96_24795 PF10298 WhiA N-terminal LAGLIDADG-like domain CY96_24795 PF14527 WhiA LAGLIDADG-like domain CY96_24795 PF02650 WhiA C-terminal HTH domain CY96_24800 PF01933 Uncharacterised protein family UPF0052 CY96_24805 PF03668 P-loop ATPase protein family CY96_24810 PF00293 NUDIX domain CY96_24820 PF07992 Pyridine nucleotide-disulphide oxidoreductase CY96_24830 PF14602 Hexapeptide repeat of succinyl-transferase CY96_24835 PF13419 Haloacid dehalogenase-like hydrolase CY96_24840 PF01790 Prolipoprotein diacylglyceryl transferase CY96_24845 PF07475 HPr Serine kinase C-terminal domain CY96_24845 PF02603 HPr Serine kinase N terminus CY96_24850 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV CY96_24860 PF17755 UvrA DNA-binding domain CY96_24860 PF17760 UvrA interaction domain CY96_24860 PF00005 ABC transporter CY96_24865 PF02151 UvrB/uvrC motif CY96_24865 PF12344 Ultra-violet resistance protein B CY96_24865 PF17757 UvrB interaction domain CY96_24865 PF00271 Helicase conserved C-terminal domain CY96_24865 PF04851 Type III restriction enzyme, res subunit CY96_24880 PF07739 TipAS antibiotic-recognition domain CY96_24880 PF13411 MerR HTH family regulatory protein CY96_24895 PF03601 Conserved hypothetical protein 698 CY96_24900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CY96_24900 PF03466 LysR substrate binding domain CY96_24905 PF09278 MerR, DNA binding CY96_24905 PF00376 MerR family regulatory protein CY96_24910 PF03358 NADPH-dependent FMN reductase CY96_24920 PF01906 Putative heavy-metal-binding CY96_24925 PF00005 ABC transporter CY96_24925 PF00664 ABC transporter transmembrane region CY96_24930 PF17820 PDZ domain CY96_24935 PF01471 Putative peptidoglycan binding domain CY96_24935 PF03572 Peptidase family S41 CY96_24935 PF17820 PDZ domain CY96_24940 PF18075 FtsX extracellular domain CY96_24940 PF02687 FtsX-like permease family CY96_24945 PF00005 ABC transporter CY96_24950 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CY96_24955 PF00472 RF-1 domain CY96_24955 PF03462 PCRF domain CY96_24965 PF02810 SEC-C motif CY96_24965 PF01043 SecA preprotein cross-linking domain CY96_24965 PF07517 SecA DEAD-like domain CY96_24965 PF07516 SecA Wing and Scaffold domain CY96_24975 PF00005 ABC transporter CY96_25005 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CY96_25005 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CY96_25010 PF00313 'Cold-shock' DNA-binding domain CY96_25020 PF00271 Helicase conserved C-terminal domain CY96_25020 PF04851 Type III restriction enzyme, res subunit CY96_25025 PF00877 NlpC/P60 family CY96_25025 PF01476 LysM domain CY96_25030 PF01638 HxlR-like helix-turn-helix CY96_25035 PF02645 Uncharacterised protein, DegV family COG1307 CY96_25040 PF01205 Uncharacterized protein family UPF0029 CY96_25040 PF09186 Domain of unknown function (DUF1949) CY96_25045 PF03816 Cell envelope-related transcriptional attenuator domain CY96_25050 PF02350 UDP-N-acetylglucosamine 2-epimerase CY96_25055 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CY96_25055 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CY96_25055 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CY96_25060 PF00953 Glycosyl transferase family 4 CY96_25070 PF00874 PRD domain CY96_25070 PF00158 Sigma-54 interaction domain CY96_25070 PF03610 PTS system fructose IIA component CY96_25080 PF02417 Chromate transporter CY96_25085 PF04794 YdjC-like protein CY96_25090 PF11975 Family 4 glycosyl hydrolase C-terminal domain CY96_25090 PF02056 Family 4 glycosyl hydrolase CY96_25095 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CY96_25100 PF02378 Phosphotransferase system, EIIC CY96_25105 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CY96_25110 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CY96_25115 PF02378 Phosphotransferase system, EIIC CY96_25120 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CY96_25125 PF00375 Sodium:dicarboxylate symporter family CY96_25145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CY96_25145 PF03466 LysR substrate binding domain CY96_25160 PF01654 Cytochrome bd terminal oxidase subunit I CY96_25165 PF02322 Cytochrome bd terminal oxidase subunit II CY96_25170 PF02040 Arsenical pump membrane protein CY96_25175 PF13667 ThiC-associated domain CY96_25175 PF01964 Radical SAM ThiC family CY96_25180 PF02652 L-lactate permease CY96_25190 PF09988 Uncharacterized metal-binding protein (DUF2227) CY96_25200 PF00884 Sulfatase CY96_25210 PF01063 Amino-transferase class IV CY96_25220 PF00877 NlpC/P60 family CY96_25220 PF01476 LysM domain CY96_25230 PF07662 Na+ dependent nucleoside transporter C-terminus CY96_25230 PF01773 Na+ dependent nucleoside transporter N-terminus CY96_25250 PF02028 BCCT, betaine/carnitine/choline family transporter CY96_25255 PF06725 3D domain CY96_25255 PF01476 LysM domain CY96_25280 PF04434 SWIM zinc finger CY96_25285 PF00271 Helicase conserved C-terminal domain CY96_25285 PF00176 SNF2 family N-terminal domain CY96_25285 PF12419 SNF2 Helicase protein CY96_25315 PF04545 Sigma-70, region 4 CY96_25315 PF04542 Sigma-70 region 2 CY96_25320 PF04893 Yip1 domain CY96_25325 PF12704 MacB-like periplasmic core domain CY96_25325 PF02687 FtsX-like permease family CY96_25330 PF00005 ABC transporter CY96_25350 PF07690 Major Facilitator Superfamily CY96_25365 PF16736 Single Cache-like CY96_25365 PF00989 PAS fold CY96_25365 PF00512 His Kinase A (phospho-acceptor) domain CY96_25365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_25370 PF00072 Response regulator receiver domain CY96_25370 PF00486 Transcriptional regulatory protein, C terminal CY96_25375 PF01238 Phosphomannose isomerase type I CY96_25380 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CY96_25380 PF02378 Phosphotransferase system, EIIC CY96_25380 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CY96_25385 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CY96_25385 PF00874 PRD domain CY96_25385 PF05043 Mga helix-turn-helix domain CY96_25385 PF08279 HTH domain CY96_25390 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CY96_25390 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CY96_25390 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CY96_25390 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CY96_25400 PF03816 Cell envelope-related transcriptional attenuator domain CY96_25405 PF01238 Phosphomannose isomerase type I CY96_25410 PF01050 Mannose-6-phosphate isomerase CY96_25410 PF00483 Nucleotidyl transferase CY96_25415 PF13439 Glycosyltransferase Family 4 CY96_25415 PF00534 Glycosyl transferases group 1 CY96_25420 PF13439 Glycosyltransferase Family 4 CY96_25420 PF00534 Glycosyl transferases group 1 CY96_25425 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CY96_25425 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CY96_25425 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CY96_25430 PF00534 Glycosyl transferases group 1 CY96_25430 PF13439 Glycosyltransferase Family 4 CY96_25440 PF01370 NAD dependent epimerase/dehydratase family CY96_25455 PF02397 Bacterial sugar transferase CY96_25460 PF00483 Nucleotidyl transferase CY96_25470 PF13614 AAA domain CY96_25475 PF13807 G-rich domain on putative tyrosine kinase CY96_25475 PF02706 Chain length determinant protein CY96_25480 PF13614 AAA domain CY96_25485 PF07977 FabA-like domain CY96_25495 PF12116 Stage III sporulation protein D CY96_25505 PF01551 Peptidase family M23 CY96_25515 PF00005 ABC transporter CY96_25520 PF04397 LytTr DNA-binding domain CY96_25520 PF00072 Response regulator receiver domain CY96_25535 PF08486 Stage II sporulation protein CY96_25540 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CY96_25550 PF06612 Protein of unknown function (DUF1146) CY96_25555 PF00361 Proton-conducting membrane transporter CY96_25560 PF00361 Proton-conducting membrane transporter CY96_25565 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus CY96_25565 PF00361 Proton-conducting membrane transporter CY96_25565 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CY96_25570 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CY96_25575 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CY96_25585 PF00146 NADH dehydrogenase CY96_25590 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CY96_25595 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CY96_25600 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CY96_25605 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CY96_25610 PF00990 Diguanylate cyclase, GGDEF domain CY96_25610 PF03707 Bacterial signalling protein N terminal repeat CY96_25610 PF00563 EAL domain CY96_25625 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CY96_25625 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CY96_25630 PF02874 ATP synthase alpha/beta family, beta-barrel domain CY96_25630 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CY96_25635 PF00231 ATP synthase CY96_25645 PF00306 ATP synthase alpha/beta chain, C terminal domain CY96_25645 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CY96_25645 PF02874 ATP synthase alpha/beta family, beta-barrel domain CY96_25650 PF00213 ATP synthase delta (OSCP) subunit CY96_25655 PF00430 ATP synthase B/B' CF(0) CY96_25660 PF00137 ATP synthase subunit C CY96_25665 PF00119 ATP synthase A chain CY96_25670 PF03899 ATP synthase I chain CY96_25690 PF00464 Serine hydroxymethyltransferase CY96_25695 PF04260 Protein of unknown function (DUF436) CY96_25700 PF02502 Ribose/Galactose Isomerase CY96_25705 PF01451 Low molecular weight phosphotyrosine protein phosphatase CY96_25710 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CY96_25715 PF07681 DoxX CY96_25720 PF01613 Flavin reductase like domain CY96_25735 PF02659 Putative manganese efflux pump CY96_25740 PF03481 Putative GTP-binding controlling metal-binding CY96_25740 PF01300 Telomere recombination CY96_25750 PF09551 Stage II sporulation protein R (spore_II_R) CY96_25755 PF13847 Methyltransferase domain CY96_25755 PF17827 PrmC N-terminal domain CY96_25760 PF03462 PCRF domain CY96_25760 PF00472 RF-1 domain CY96_25765 PF00265 Thymidine kinase CY96_25770 PF01197 Ribosomal protein L31 CY96_25775 PF07498 Rho termination factor, N-terminal domain CY96_25775 PF07497 Rho termination factor, RNA-binding domain CY96_25775 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CY96_25790 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CY96_25800 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CY96_25805 PF01116 Fructose-bisphosphate aldolase class-II CY96_25810 PF00072 Response regulator receiver domain CY96_25815 PF10740 Domain of unknown function (DUF2529) CY96_25820 PF00117 Glutamine amidotransferase class-I CY96_25820 PF06418 CTP synthase N-terminus CY96_25825 PF05066 HB1, ASXL, restriction endonuclease HTH domain CY96_25835 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CY96_25835 PF02770 Acyl-CoA dehydrogenase, middle domain CY96_25835 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CY96_25840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CY96_25840 PF02770 Acyl-CoA dehydrogenase, middle domain CY96_25840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CY96_25845 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CY96_25845 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CY96_25850 PF02803 Thiolase, C-terminal domain CY96_25850 PF00108 Thiolase, N-terminal domain CY96_25855 PF02754 Cysteine-rich domain CY96_25855 PF13183 4Fe-4S dicluster domain CY96_25860 PF13091 PLD-like domain CY96_25865 PF03851 UV-endonuclease UvdE CY96_25870 PF03707 Bacterial signalling protein N terminal repeat CY96_25870 PF00990 Diguanylate cyclase, GGDEF domain CY96_25870 PF00563 EAL domain CY96_25885 PF02868 Thermolysin metallopeptidase, alpha-helical domain CY96_25885 PF07504 Fungalysin/Thermolysin Propeptide Motif CY96_25885 PF03413 Peptidase propeptide and YPEB domain CY96_25885 PF01447 Thermolysin metallopeptidase, catalytic domain CY96_25890 PF00072 Response regulator receiver domain CY96_25890 PF00196 Bacterial regulatory proteins, luxR family CY96_25895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_25895 PF07730 Histidine kinase CY96_25905 PF00005 ABC transporter CY96_25910 PF00557 Metallopeptidase family M24 CY96_25920 PF04389 Peptidase family M28 CY96_25920 PF02225 PA domain CY96_25940 PF04542 Sigma-70 region 2 CY96_25940 PF08281 Sigma-70, region 4 CY96_25945 PF00750 tRNA synthetases class I (R) CY96_25945 PF03485 Arginyl tRNA synthetase N terminal domain CY96_25945 PF05746 DALR anticodon binding domain CY96_25950 PF09148 Domain of unknown function (DUF1934) CY96_25955 PF17676 LD-carboxypeptidase C-terminal domain CY96_25955 PF02016 LD-carboxypeptidase N-terminal domain CY96_25970 PF00491 Arginase family CY96_25975 PF17284 Spermidine synthase tetramerisation domain CY96_25980 PF07690 Major Facilitator Superfamily CY96_25985 PF13411 MerR HTH family regulatory protein CY96_25995 PF03009 Glycerophosphoryl diester phosphodiesterase family CY96_26000 PF00912 Transglycosylase CY96_26000 PF00905 Penicillin binding protein transpeptidase domain CY96_26005 PF08741 YwhD family CY96_26010 PF02163 Peptidase family M50 CY96_26015 PF01361 Tautomerase enzyme CY96_26020 PF01966 HD domain CY96_26025 PF01497 Periplasmic binding protein CY96_26030 PF00005 ABC transporter CY96_26035 PF01032 FecCD transport family CY96_26040 PF01032 FecCD transport family CY96_26045 PF07293 Protein of unknown function (DUF1450) CY96_26055 PF03099 Biotin/lipoate A/B protein ligase family CY96_26060 PF01515 Phosphate acetyl/butaryl transferase CY96_26070 PF07943 Penicillin-binding protein 5, C-terminal domain CY96_26070 PF00768 D-alanyl-D-alanine carboxypeptidase CY96_26075 PF07486 Cell Wall Hydrolase CY96_26080 PF09671 Spore coat protein (Spore_GerQ) CY96_26085 PF04241 Protein of unknown function (DUF423) CY96_26095 PF07885 Ion channel CY96_26095 PF02254 TrkA-N domain CY96_26100 PF00860 Permease family CY96_26110 PF12823 Domain of unknown function (DUF3817) CY96_26115 PF03167 Uracil DNA glycosylase superfamily CY96_26120 PF12679 ABC-2 family transporter protein CY96_26125 PF00005 ABC transporter CY96_26130 PF13472 GDSL-like Lipase/Acylhydrolase family CY96_26135 PF00356 Bacterial regulatory proteins, lacI family CY96_26135 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CY96_26145 PF00742 Homoserine dehydrogenase CY96_26145 PF03447 Homoserine dehydrogenase, NAD binding domain CY96_26145 PF01842 ACT domain CY96_26150 PF04204 Homoserine O-succinyltransferase CY96_26155 PF01053 Cys/Met metabolism PLP-dependent enzyme CY96_26165 PF13419 Haloacid dehalogenase-like hydrolase CY96_26170 PF00027 Cyclic nucleotide-binding domain CY96_26175 PF02525 Flavodoxin-like fold CY96_26180 PF00072 Response regulator receiver domain CY96_26180 PF00196 Bacterial regulatory proteins, luxR family CY96_26185 PF13185 GAF domain CY96_26185 PF07730 Histidine kinase CY96_26190 PF08543 Phosphomethylpyrimidine kinase CY96_26195 PF07694 5TMR of 5TMR-LYT CY96_26195 PF00990 Diguanylate cyclase, GGDEF domain CY96_26200 PF04328 Selenoprotein, putative CY96_26205 PF02554 Carbon starvation protein CstA CY96_26205 PF13722 5TM C-terminal transporter carbon starvation CstA CY96_26210 PF00072 Response regulator receiver domain CY96_26210 PF04397 LytTr DNA-binding domain CY96_26215 PF07690 Major Facilitator Superfamily CY96_26220 PF03808 Glycosyl transferase WecB/TagA/CpsF family CY96_26225 PF00534 Glycosyl transferases group 1 CY96_26225 PF13439 Glycosyltransferase Family 4 CY96_26235 PF03458 UPF0126 domain CY96_26240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CY96_26250 PF03061 Thioesterase superfamily CY96_26255 PF00535 Glycosyl transferase family 2 CY96_26270 PF00535 Glycosyl transferase family 2 CY96_26280 PF09586 Bacterial membrane protein YfhO CY96_26285 PF00535 Glycosyl transferase family 2 CY96_26290 PF00005 ABC transporter CY96_26290 PF12848 ABC transporter CY96_26295 PF00440 Bacterial regulatory proteins, tetR family CY96_26300 PF00873 AcrB/AcrD/AcrF family CY96_26305 PF01641 SelR domain CY96_26305 PF01625 Peptide methionine sulfoxide reductase CY96_26310 PF01594 AI-2E family transporter CY96_26315 PF04172 LrgB-like family CY96_26320 PF03788 LrgA family CY96_26325 PF04397 LytTr DNA-binding domain CY96_26325 PF00072 Response regulator receiver domain CY96_26330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_26330 PF07694 5TMR of 5TMR-LYT CY96_26330 PF13492 GAF domain CY96_26330 PF06580 Histidine kinase CY96_26335 PF07690 Major Facilitator Superfamily CY96_26340 PF02028 BCCT, betaine/carnitine/choline family transporter CY96_26345 PF02898 Nitric oxide synthase, oxygenase domain CY96_26350 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CY96_26350 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CY96_26360 PF02293 AmiS/UreI family transporter CY96_26365 PF16363 GDP-mannose 4,6 dehydratase CY96_26370 PF03006 Haemolysin-III related CY96_26380 PF03880 DbpA RNA binding domain CY96_26380 PF00270 DEAD/DEAH box helicase CY96_26380 PF00271 Helicase conserved C-terminal domain CY96_26385 PF00478 IMP dehydrogenase / GMP reductase domain CY96_26410 PF13426 PAS domain CY96_26410 PF00989 PAS fold CY96_26410 PF13188 PAS domain CY96_26410 PF00512 His Kinase A (phospho-acceptor) domain CY96_26410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_26415 PF02590 Predicted SPOUT methyltransferase CY96_26425 PF13180 PDZ domain CY96_26430 PF00753 Metallo-beta-lactamase superfamily CY96_26435 PF09648 YycH protein CY96_26445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_26445 PF00672 HAMP domain CY96_26445 PF00512 His Kinase A (phospho-acceptor) domain CY96_26445 PF13426 PAS domain CY96_26450 PF00072 Response regulator receiver domain CY96_26450 PF00486 Transcriptional regulatory protein, C terminal CY96_26475 PF00709 Adenylosuccinate synthetase CY96_26480 PF00772 DnaB-like helicase N terminal domain CY96_26480 PF03796 DnaB-like helicase C terminal domain CY96_26485 PF01281 Ribosomal protein L9, N-terminal domain CY96_26485 PF03948 Ribosomal protein L9, C-terminal domain CY96_26490 PF01368 DHH family CY96_26490 PF02272 DHHA1 domain CY96_26495 PF09991 Predicted membrane protein (DUF2232) CY96_26500 PF01084 Ribosomal protein S18 CY96_26505 PF00436 Single-strand binding protein family CY96_26510 PF01250 Ribosomal protein S6 CY96_26515 PF01926 50S ribosome-binding GTPase CY96_26515 PF06071 Protein of unknown function (DUF933) CY96_26520 PF06107 Bacterial protein of unknown function (DUF951) CY96_26525 PF00924 Mechanosensitive ion channel CY96_26530 PF06866 Protein of unknown function (DUF1256) CY96_26535 PF17762 HTH domain found in ParB protein CY96_26535 PF02195 ParB-like nuclease domain CY96_26540 PF13614 AAA domain CY96_26545 PF17762 HTH domain found in ParB protein CY96_26545 PF02195 ParB-like nuclease domain CY96_26550 PF02527 rRNA small subunit methyltransferase G CY96_26555 PF13932 GidA associated domain CY96_26555 PF01134 Glucose inhibited division protein A CY96_26560 PF01926 50S ribosome-binding GTPase CY96_26560 PF12631 MnmE helical domain CY96_26560 PF10396 GTP-binding protein TrmE N-terminus CY96_26565 PF01424 R3H domain CY96_26565 PF14804 Jag N-terminus CY96_26570 PF02096 60Kd inner membrane protein CY96_26575 PF00825 Ribonuclease P CY96_26580 PF00468 Ribosomal protein L34 CY96_26585 PF00308 Bacterial dnaA protein CY96_26585 PF08299 Bacterial dnaA protein helix-turn-helix CY96_26585 PF11638 DnaA N-terminal domain CY96_26590 PF02767 DNA polymerase III beta subunit, central domain CY96_26590 PF02768 DNA polymerase III beta subunit, C-terminal domain CY96_26590 PF00712 DNA polymerase III beta subunit, N-terminal domain CY96_26600 PF02463 RecF/RecN/SMC N terminal domain CY96_26605 PF00204 DNA gyrase B CY96_26605 PF00986 DNA gyrase B subunit, carboxyl terminus CY96_26605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_26605 PF01751 Toprim domain CY96_26610 PF00521 DNA gyrase/topoisomerase IV, subunit A CY96_26610 PF03989 DNA gyrase C-terminal domain, beta-propeller CY96_26630 PF14175 YaaC-like Protein CY96_26635 PF00478 IMP dehydrogenase / GMP reductase domain CY96_26635 PF00571 CBS domain CY96_26640 PF00768 D-alanyl-D-alanine carboxypeptidase CY96_26640 PF07943 Penicillin-binding protein 5, C-terminal domain CY96_26645 PF01680 SOR/SNZ family CY96_26650 PF01174 SNO glutamine amidotransferase family CY96_26655 PF02403 Seryl-tRNA synthetase N-terminal domain CY96_26655 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CY96_26670 PF01712 Deoxynucleoside kinase CY96_26675 PF01712 Deoxynucleoside kinase CY96_26680 PF00857 Isochorismatase family CY96_26685 PF14437 MafB19-like deaminase CY96_26690 PF12169 DNA polymerase III subunits gamma and tau domain III CY96_26695 PF02575 YbaB/EbfC DNA-binding family CY96_26700 PF13662 Toprim domain CY96_26700 PF02132 RecR protein CY96_26705 PF10704 Protein of unknown function (DUF2508) CY96_26710 PF07441 SigmaK-factor processing regulatory protein BofA CY96_26735 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CY96_26735 PF01276 Orn/Lys/Arg decarboxylase, major domain CY96_26740 PF02223 Thymidylate kinase CY96_26745 PF09115 DNA polymerase III, delta subunit, C terminal CY96_26750 PF04468 PSP1 C-terminal conserved region CY96_26755 PF06156 Initiation control protein YabA CY96_26760 PF05175 Methyltransferase small domain CY96_26765 PF01541 GIY-YIG catalytic domain CY96_26770 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CY96_26775 PF18277 AbrB C-terminal domain CY96_26775 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CY96_26780 PF09334 tRNA synthetases class I (M) CY96_26780 PF08264 Anticodon-binding domain of tRNA CY96_26780 PF01588 Putative tRNA binding domain CY96_26785 PF01026 TatD related DNase CY96_26790 PF13331 Domain of unknown function (DUF4093) CY96_26790 PF13662 Toprim domain CY96_26795 PF00398 Ribosomal RNA adenine dimethylase CY96_26800 PF05582 YabG peptidase U57 CY96_26805 PF06257 Biofilm formation stimulator VEG CY96_26810 PF00269 Small, acid-soluble spore proteins, alpha/beta type CY96_26815 PF00288 GHMP kinases N terminal domain CY96_26815 PF08544 GHMP kinases C terminal CY96_26820 PF00156 Phosphoribosyl transferase domain CY96_26820 PF09182 Bacterial purine repressor, N-terminal CY96_26825 PF01042 Endoribonuclease L-PSP CY96_26830 PF04026 SpoVG CY96_26835 PF00483 Nucleotidyl transferase CY96_26835 PF00132 Bacterial transferase hexapeptide (six repeats) CY96_26840 PF14572 Phosphoribosyl synthetase-associated domain CY96_26840 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CY96_26845 PF01195 Peptidyl-tRNA hydrolase CY96_26855 PF00270 DEAD/DEAH box helicase CY96_26855 PF03461 TRCF domain CY96_26855 PF02559 CarD-like/TRCF domain CY96_26855 PF17757 UvrB interaction domain CY96_26855 PF00271 Helicase conserved C-terminal domain CY96_26860 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CY96_26860 PF15714 Stage V sporulation protein T C-terminal, transcription factor CY96_26865 PF01943 Polysaccharide biosynthesis protein CY96_26865 PF14667 Polysaccharide biosynthesis C-terminal domain CY96_26870 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CY96_26870 PF03819 MazG nucleotide pyrophosphohydrolase domain CY96_26875 PF01479 S4 domain CY96_26880 PF07873 YabP family CY96_26885 PF09578 Spore cortex protein YabQ (Spore_YabQ) CY96_26895 PF00575 S1 RNA binding domain CY96_26910 PF07228 Stage II sporulation protein E (SpoIIE) CY96_26915 PF01171 PP-loop family CY96_26915 PF09179 TilS substrate binding domain CY96_26915 PF11734 TilS substrate C-terminal domain CY96_26925 PF17862 AAA+ lid domain CY96_26925 PF06480 FtsH Extracellular CY96_26925 PF00004 ATPase family associated with various cellular activities (AAA) CY96_26925 PF01434 Peptidase family M41 CY96_26930 PF03309 Type III pantothenate kinase CY96_26935 PF01430 Hsp33 protein CY96_26940 PF00291 Pyridoxal-phosphate dependent enzyme CY96_26945 PF04715 Anthranilate synthase component I, N terminal region CY96_26945 PF00425 chorismate binding enzyme CY96_26950 PF00117 Glutamine amidotransferase class-I CY96_26955 PF01063 Amino-transferase class IV CY96_26960 PF00809 Pterin binding enzyme CY96_26965 PF02152 Dihydroneopterin aldolase CY96_26970 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CY96_26975 PF01381 Helix-turn-helix CY96_26980 PF01207 Dihydrouridine synthase (Dus) CY96_26985 PF01336 OB-fold nucleic acid binding domain CY96_26985 PF00152 tRNA synthetases class II (D, K and N) CY96_27005 PF05848 CtsR N-terminal HTH domain CY96_27005 PF17727 CtsR C-terminal dimerization domain CY96_27010 PF02151 UvrB/uvrC motif CY96_27015 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain CY96_27020 PF02861 Clp amino terminal domain, pathogenicity island component CY96_27020 PF00004 ATPase family associated with various cellular activities (AAA) CY96_27020 PF07724 AAA domain (Cdc48 subfamily) CY96_27020 PF17871 AAA lid domain CY96_27020 PF10431 C-terminal, D2-small domain, of ClpB protein CY96_27025 PF18073 Rubredoxin metal binding domain CY96_27030 PF02457 DisA bacterial checkpoint controller nucleotide-binding CY96_27030 PF10635 DisA bacterial checkpoint controller linker region CY96_27040 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CY96_27045 PF02542 YgbB family CY96_27050 PF00749 tRNA synthetases class I (E and Q), catalytic domain CY96_27055 PF06426 Serine acetyltransferase, N-terminal CY96_27055 PF00132 Bacterial transferase hexapeptide (six repeats) CY96_27060 PF09190 DALR domain CY96_27060 PF01406 tRNA synthetases class I (C) catalytic domain CY96_27065 PF00636 Ribonuclease III domain CY96_27070 PF08032 RNA 2'-O ribose methyltransferase substrate binding CY96_27070 PF00588 SpoU rRNA Methylase family CY96_27075 PF05991 YacP-like NYN domain CY96_27080 PF04542 Sigma-70 region 2 CY96_27080 PF08281 Sigma-70, region 4 CY96_27085 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CY96_27090 PF02357 Transcription termination factor nusG CY96_27090 PF00467 KOW motif CY96_27095 PF03946 Ribosomal protein L11, N-terminal domain CY96_27095 PF00298 Ribosomal protein L11, RNA binding domain CY96_27100 PF00687 Ribosomal protein L1p/L10e family CY96_27105 PF00466 Ribosomal protein L10 CY96_27110 PF16320 Ribosomal protein L7/L12 dimerisation domain CY96_27110 PF00542 Ribosomal protein L7/L12 C-terminal domain CY96_27115 PF05175 Methyltransferase small domain CY96_27120 PF10385 RNA polymerase beta subunit external 1 domain CY96_27120 PF04565 RNA polymerase Rpb2, domain 3 CY96_27120 PF04561 RNA polymerase Rpb2, domain 2 CY96_27120 PF04563 RNA polymerase beta subunit CY96_27120 PF04560 RNA polymerase Rpb2, domain 7 CY96_27120 PF00562 RNA polymerase Rpb2, domain 6 CY96_27125 PF05000 RNA polymerase Rpb1, domain 4 CY96_27125 PF04998 RNA polymerase Rpb1, domain 5 CY96_27125 PF00623 RNA polymerase Rpb1, domain 2 CY96_27125 PF04997 RNA polymerase Rpb1, domain 1 CY96_27125 PF04983 RNA polymerase Rpb1, domain 3 CY96_27130 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CY96_27135 PF00164 Ribosomal protein S12/S23 CY96_27140 PF00177 Ribosomal protein S7p/S5e CY96_27145 PF03764 Elongation factor G, domain IV CY96_27145 PF03144 Elongation factor Tu domain 2 CY96_27145 PF00009 Elongation factor Tu GTP binding domain CY96_27145 PF00679 Elongation factor G C-terminus CY96_27145 PF14492 Elongation Factor G, domain II CY96_27150 PF03144 Elongation factor Tu domain 2 CY96_27150 PF00009 Elongation factor Tu GTP binding domain CY96_27150 PF03143 Elongation factor Tu C-terminal domain CY96_27155 PF00338 Ribosomal protein S10p/S20e CY96_27160 PF00297 Ribosomal protein L3 CY96_27165 PF00573 Ribosomal protein L4/L1 family CY96_27170 PF00276 Ribosomal protein L23 CY96_27175 PF00181 Ribosomal Proteins L2, RNA binding domain CY96_27175 PF03947 Ribosomal Proteins L2, C-terminal domain CY96_27180 PF00203 Ribosomal protein S19 CY96_27185 PF00237 Ribosomal protein L22p/L17e CY96_27190 PF07650 KH domain CY96_27190 PF00189 Ribosomal protein S3, C-terminal domain CY96_27195 PF00252 Ribosomal protein L16p/L10e CY96_27200 PF00831 Ribosomal L29 protein CY96_27205 PF00366 Ribosomal protein S17 CY96_27210 PF00238 Ribosomal protein L14p/L23e CY96_27215 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CY96_27215 PF00467 KOW motif CY96_27220 PF00673 ribosomal L5P family C-terminus CY96_27220 PF00281 Ribosomal protein L5 CY96_27225 PF00253 Ribosomal protein S14p/S29e CY96_27230 PF00410 Ribosomal protein S8 CY96_27235 PF00347 Ribosomal protein L6 CY96_27240 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CY96_27245 PF00333 Ribosomal protein S5, N-terminal domain CY96_27245 PF03719 Ribosomal protein S5, C-terminal domain CY96_27250 PF00327 Ribosomal protein L30p/L7e CY96_27255 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CY96_27260 PF00344 SecY translocase CY96_27265 PF05191 Adenylate kinase, active site lid CY96_27270 PF00557 Metallopeptidase family M24 CY96_27275 PF01176 Translation initiation factor 1A / IF-1 CY96_27280 PF00444 Ribosomal protein L36 CY96_27285 PF00416 Ribosomal protein S13/S18 CY96_27290 PF00411 Ribosomal protein S11 CY96_27295 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CY96_27295 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CY96_27295 PF01000 RNA polymerase Rpb3/RpoA insert domain CY96_27300 PF01196 Ribosomal protein L17 CY96_27305 PF00005 ABC transporter CY96_27310 PF00005 ABC transporter CY96_27315 PF02361 Cobalt transport protein CY96_27320 PF01416 tRNA pseudouridine synthase CY96_27325 PF00572 Ribosomal protein L13 CY96_27330 PF00380 Ribosomal protein S9/S16 CY96_27340 PF01520 N-acetylmuramoyl-L-alanine amidase CY96_27345 PF10609 NUBPL iron-transfer P-loop NTPase CY96_27350 PF17898 Spore germination GerD central core domain CY96_27355 PF14089 KinB-signalling pathway activation in sporulation CY96_27360 PF01522 Polysaccharide deacetylase CY96_27455 PF00082 Subtilase family CY96_27460 PF00664 ABC transporter transmembrane region CY96_27460 PF00005 ABC transporter CY96_27460 PF03412 Peptidase C39 family CY96_27495 PF04607 Region found in RelA / SpoT proteins CY96_27495 PF13291 ACT domain CY96_27495 PF02824 TGS domain CY96_27505 PF00216 Bacterial DNA-binding protein CY96_27510 PF13302 Acetyltransferase (GNAT) domain CY96_27515 PF12706 Beta-lactamase superfamily domain CY96_27525 PF12389 Camelysin metallo-endopeptidase CY96_27530 PF13860 FlgD Ig-like domain CY96_27530 PF02225 PA domain CY96_27530 PF05922 Peptidase inhibitor I9 CY96_27530 PF00082 Subtilase family CY96_27535 PF00196 Bacterial regulatory proteins, luxR family CY96_27535 PF00072 Response regulator receiver domain CY96_27540 PF07730 Histidine kinase CY96_27540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_27540 PF13492 GAF domain CY96_27555 PF00440 Bacterial regulatory proteins, tetR family CY96_27560 PF00082 Subtilase family CY96_27565 PF05147 Lanthionine synthetase C-like protein CY96_27570 PF00005 ABC transporter CY96_27575 PF04738 Lantibiotic dehydratase, N terminus CY96_27575 PF14028 Lantibiotic biosynthesis dehydratase C-term CY96_27590 PF13537 Glutamine amidotransferase domain CY96_27590 PF00733 Asparagine synthase CY96_27595 PF17932 Tetracyclin repressor-like, C-terminal domain CY96_27595 PF00440 Bacterial regulatory proteins, tetR family CY96_27615 PF14436 Bacterial EndoU nuclease CY96_27615 PF04740 LXG domain of WXG superfamily CY96_27640 PF00512 His Kinase A (phospho-acceptor) domain CY96_27640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_27640 PF00672 HAMP domain CY96_27645 PF00486 Transcriptional regulatory protein, C terminal CY96_27645 PF00072 Response regulator receiver domain CY96_27655 PF13847 Methyltransferase domain CY96_27655 PF00069 Protein kinase domain CY96_27675 PF00392 Bacterial regulatory proteins, gntR family CY96_27675 PF00155 Aminotransferase class I and II CY96_27680 PF03591 AzlC protein CY96_27685 PF05437 Branched-chain amino acid transport protein (AzlD) CY96_27710 PF00860 Permease family CY96_27715 PF02560 Cyanate lyase C-terminal domain CY96_27720 PF00484 Carbonic anhydrase CY96_27725 PF01037 Lrp/AsnC ligand binding domain CY96_27755 PF06414 Zeta toxin CY96_27760 PF00293 NUDIX domain CY96_27765 PF00453 Ribosomal protein L20 CY96_27775 PF18801 response regulator aspartate phosphatase H, N terminal CY96_27805 PF00269 Small, acid-soluble spore proteins, alpha/beta type CY96_27810 PF00672 HAMP domain CY96_27810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CY96_27880 PF05791 Bacillus haemolytic enterotoxin (HBL) CY96_27900 PF07690 Major Facilitator Superfamily CY96_27920 PF01261 Xylose isomerase-like TIM barrel CY96_27925 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CY96_27925 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CY96_27930 PF12804 MobA-like NTP transferase domain CY96_27930 PF00132 Bacterial transferase hexapeptide (six repeats) CY96_27935 PF00202 Aminotransferase class-III CY96_27940 PF00480 ROK family CY96_27945 PF01761 3-dehydroquinate synthase CY96_27950 PF07883 Cupin domain CY96_27955 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CY96_27955 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CY96_27960 PF08220 DeoR-like helix-turn-helix domain CY96_27960 PF00455 DeoR C terminal sensor domain CY96_27965 PF13419 Haloacid dehalogenase-like hydrolase CY96_27975 PF07690 Major Facilitator Superfamily CY96_27980 PF00975 Thioesterase domain CY96_27980 PF00668 Condensation domain CY96_27980 PF00501 AMP-binding enzyme CY96_27980 PF13193 AMP-binding enzyme C-terminal domain CY96_27980 PF00550 Phosphopantetheine attachment site CY96_27980 PF00501 AMP-binding enzyme CY96_27980 PF00668 Condensation domain CY96_27980 PF00975 Thioesterase domain CY96_27980 PF00550 Phosphopantetheine attachment site CY96_27980 PF13193 AMP-binding enzyme C-terminal domain CY96_27985 PF00550 Phosphopantetheine attachment site CY96_27985 PF00668 Condensation domain CY96_27985 PF13193 AMP-binding enzyme C-terminal domain CY96_27985 PF00501 AMP-binding enzyme CY96_28065 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CY96_28065 PF17854 FtsK alpha domain CY96_28065 PF09397 Ftsk gamma domain CY96_28065 PF01580 FtsK/SpoIIIE family CY96_28200 PF07282 Putative transposase DNA-binding domain CY96_28200 PF01385 Probable transposase CY96_28200 PF12323 Helix-turn-helix domain CY96_28325 PF10087 Uncharacterized protein conserved in bacteria (DUF2325) CY96_28355 PF04235 Protein of unknown function (DUF418) CY96_28365 PF18277 AbrB C-terminal domain CY96_28365 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CY96_28370 PF01494 FAD binding domain CY96_28375 PF07282 Putative transposase DNA-binding domain CY96_28375 PF12323 Helix-turn-helix domain CY96_28375 PF01385 Probable transposase CY96_28395 PF11798 IMS family HHH motif CY96_28395 PF11799 impB/mucB/samB family C-terminal domain CY96_28395 PF00817 impB/mucB/samB family CY96_28405 PF00486 Transcriptional regulatory protein, C terminal CY96_28405 PF00072 Response regulator receiver domain CY96_28410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CY96_28410 PF00512 His Kinase A (phospho-acceptor) domain CY96_28425 PF03009 Glycerophosphoryl diester phosphodiesterase family CY96_28445 PF02796 Helix-turn-helix domain of resolvase CY96_28445 PF00239 Resolvase, N terminal domain CY96_28460 PF12323 Helix-turn-helix domain CY96_28460 PF01385 Probable transposase CY96_28460 PF07282 Putative transposase DNA-binding domain CY96_28475 PF13302 Acetyltransferase (GNAT) domain CY96_28480 PF00067 Cytochrome P450 CY96_28490 PF01636 Phosphotransferase enzyme family CY96_28495 PF00534 Glycosyl transferases group 1 CY96_28495 PF13439 Glycosyltransferase Family 4 CY96_28515 PF00534 Glycosyl transferases group 1 CY96_28515 PF13439 Glycosyltransferase Family 4 CY96_28520 PF01370 NAD dependent epimerase/dehydratase family CY96_28525 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CY96_28525 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CY96_28525 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CY96_28530 PF00483 Nucleotidyl transferase CY96_28560 PF18277 AbrB C-terminal domain CY96_28560 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CY96_28580 PF02805 Metal binding domain of Ada CY96_28580 PF12833 Helix-turn-helix domain CY96_28590 PF01609 Transposase DDE domain CY96_28615 PF00216 Bacterial DNA-binding protein CY96_28625 PF00282 Pyridoxal-dependent decarboxylase conserved domain CY96_28650 PF16872 Putative phage abortive infection protein CY96_28680 PF01520 N-acetylmuramoyl-L-alanine amidase CY96_28680 PF00395 S-layer homology domain CY96_28690 PF01510 N-acetylmuramoyl-L-alanine amidase CY96_28690 PF01471 Putative peptidoglycan binding domain CY96_28695 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CY96_28695 PF02403 Seryl-tRNA synthetase N-terminal domain CY96_28705 PF03965 Penicillinase repressor CY96_28715 PF07282 Putative transposase DNA-binding domain CY96_28715 PF01385 Probable transposase CY96_28715 PF12323 Helix-turn-helix domain CY96_28730 PF01385 Probable transposase CY96_28730 PF12323 Helix-turn-helix domain CY96_28730 PF07282 Putative transposase DNA-binding domain CY96_28775 PF02687 FtsX-like permease family CY96_28810 PF01037 Lrp/AsnC ligand binding domain CY96_28820 PF01476 LysM domain CY96_28820 PF01510 N-acetylmuramoyl-L-alanine amidase CY96_28820 PF01471 Putative peptidoglycan binding domain CY96_28825 PF01619 Proline dehydrogenase CY96_28830 PF00155 Aminotransferase class I and II CY96_28830 PF00392 Bacterial regulatory proteins, gntR family CY96_28855 PF01385 Probable transposase CY96_28855 PF12323 Helix-turn-helix domain CY96_28855 PF07282 Putative transposase DNA-binding domain CY96_28900 PF08484 C-methyltransferase C-terminal domain CY96_28900 PF08421 Putative zinc binding domain CY96_28905 PF00483 Nucleotidyl transferase CY96_28915 PF12996 DUF based on E. rectale Gene description (DUF3880) CY96_28930 PF16715 Cyclodipeptide synthase CY96_28935 PF00067 Cytochrome P450 CY96_28940 PF01047 MarR family CY96_28945 PF01047 MarR family CY96_28950 PF07690 Major Facilitator Superfamily CY96_28965 PF00665 Integrase core domain CY96_28965 PF13333 Integrase core domain CY96_28965 PF13276 HTH-like domain CY96_28970 PF00905 Penicillin binding protein transpeptidase domain CY96_28970 PF00912 Transglycosylase CY96_28975 PF17209 Hfq protein CY96_29000 PF01037 Lrp/AsnC ligand binding domain CY96_29010 PF02661 Fic/DOC family CY96_29035 PF13610 DDE domain CY96_29055 PF00797 N-acetyltransferase CY96_29070 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family CY96_29075 PF10842 Protein of unknown function (DUF2642) CY96_29085 PF13536 Putative multidrug resistance efflux transporter CY96_29090 PF00665 Integrase core domain CY96_29090 PF13333 Integrase core domain CY96_29100 PF13536 Putative multidrug resistance efflux transporter CY96_29105 PF07729 FCD domain CY96_29105 PF00392 Bacterial regulatory proteins, gntR family CY96_29120 PF01613 Flavin reductase like domain CY96_29135 PF04239 Protein of unknown function (DUF421) CY96_29145 PF07859 alpha/beta hydrolase fold CY96_29150 PF05504 Spore germination B3/ GerAC like, C-terminal CY96_29155 PF00355 Rieske [2Fe-2S] domain CY96_29160 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain CY96_29160 PF01522 Polysaccharide deacetylase CY96_29185 PF11495 Archaeal transcriptional regulator TrmB CY96_29185 PF01978 Sugar-specific transcriptional regulator TrmB CY96_29205 PF01022 Bacterial regulatory protein, arsR family CY96_29210 PF17209 Hfq protein CY96_29220 PF01619 Proline dehydrogenase CY96_29225 PF00392 Bacterial regulatory proteins, gntR family CY96_29225 PF00155 Aminotransferase class I and II CY96_29245 PF00005 ABC transporter CY96_29255 PF13495 Phage integrase, N-terminal SAM-like domain CY96_29255 PF00589 Phage integrase family CY96_29280 PF07681 DoxX CY96_29285 PF13193 AMP-binding enzyme C-terminal domain CY96_29285 PF00501 AMP-binding enzyme CY96_29305 PF01833 IPT/TIG domain CY96_29305 PF00686 Starch binding domain CY96_29305 PF00128 Alpha amylase, catalytic domain CY96_29310 PF07690 Major Facilitator Superfamily CY96_29345 PF00388 Phosphatidylinositol-specific phospholipase C, X domain CY96_29350 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CY96_29350 PF18416 N-acetylglucosamine binding protein domain 2 CY96_29360 PF03323 Bacillus/Clostridium GerA spore germination protein CY96_29400 PF00553 Cellulose binding domain CY96_29400 PF00704 Glycosyl hydrolases family 18 CY96_29400 PF00041 Fibronectin type III domain CY96_29410 PF01022 Bacterial regulatory protein, arsR family CY96_29415 PF18801 response regulator aspartate phosphatase H, N terminal CY96_29430 PF01022 Bacterial regulatory protein, arsR family CY96_29435 PF02600 Disulfide bond formation protein DsbB CY96_29450 PF00565 Staphylococcal nuclease homologue CY96_29460 PF06800 Sugar transport protein CY96_29480 PF02677 Epoxyqueuosine reductase QueH CY96_29490 PF08378 Nuclease-related domain CY96_29515 PF01471 Putative peptidoglycan binding domain CY96_29515 PF01476 LysM domain CY96_29515 PF01510 N-acetylmuramoyl-L-alanine amidase CY96_29545 PF00005 ABC transporter CY96_29550 PF00005 ABC transporter CY96_29550 PF00664 ABC transporter transmembrane region CY96_29555 PF05147 Lanthionine synthetase C-like protein CY96_29555 PF13575 Domain of unknown function (DUF4135) CY96_29570 PF02195 ParB-like nuclease domain CY96_29575 PF02423 Ornithine cyclodeaminase/mu-crystallin family CY96_29580 PF00291 Pyridoxal-phosphate dependent enzyme CY96_29585 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CY96_29585 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CY96_29595 PF01648 4'-phosphopantetheinyl transferase superfamily CY96_29600 PF00501 AMP-binding enzyme CY96_29600 PF00975 Thioesterase domain CY96_29600 PF13193 AMP-binding enzyme C-terminal domain CY96_29600 PF00668 Condensation domain CY96_29600 PF00550 Phosphopantetheine attachment site CY96_29610 PF00668 Condensation domain CY96_29610 PF00501 AMP-binding enzyme CY96_29610 PF13193 AMP-binding enzyme C-terminal domain CY96_29610 PF00550 Phosphopantetheine attachment site CY96_29620 PF00005 ABC transporter CY96_29620 PF00664 ABC transporter transmembrane region CY96_29625 PF00296 Luciferase-like monooxygenase CY96_29630 PF00501 AMP-binding enzyme CY96_29630 PF13193 AMP-binding enzyme C-terminal domain CY96_29630 PF00668 Condensation domain CY96_29630 PF00550 Phosphopantetheine attachment site CY96_29630 PF00109 Beta-ketoacyl synthase, N-terminal domain CY96_29630 PF08659 KR domain CY96_29630 PF14765 Polyketide synthase dehydratase CY96_29630 PF02801 Beta-ketoacyl synthase, C-terminal domain CY96_29630 PF16197 Ketoacyl-synthetase C-terminal extension CY96_29635 PF00975 Thioesterase domain CY96_29635 PF00550 Phosphopantetheine attachment site CY96_29635 PF00501 AMP-binding enzyme CY96_29635 PF13193 AMP-binding enzyme C-terminal domain CY96_29635 PF00668 Condensation domain CY96_29640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CY96_29640 PF02770 Acyl-CoA dehydrogenase, middle domain CY96_29640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CY96_29645 PF00550 Phosphopantetheine attachment site CY96_29650 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CY96_29650 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CY96_29655 PF00698 Acyl transferase domain CY96_29665 PF02770 Acyl-CoA dehydrogenase, middle domain CY96_29665 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CY96_29665 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CY96_29675 PF00550 Phosphopantetheine attachment site CY96_29675 PF00668 Condensation domain CY96_29675 PF13193 AMP-binding enzyme C-terminal domain CY96_29675 PF00501 AMP-binding enzyme CY96_29680 PF00668 Condensation domain CY96_29680 PF00501 AMP-binding enzyme CY96_29680 PF00550 Phosphopantetheine attachment site CY96_29680 PF00975 Thioesterase domain CY96_29680 PF13193 AMP-binding enzyme C-terminal domain CY96_29685 PF08659 KR domain CY96_29685 PF14765 Polyketide synthase dehydratase CY96_29685 PF00668 Condensation domain CY96_29685 PF16197 Ketoacyl-synthetase C-terminal extension CY96_29685 PF13193 AMP-binding enzyme C-terminal domain CY96_29685 PF00109 Beta-ketoacyl synthase, N-terminal domain CY96_29685 PF02801 Beta-ketoacyl synthase, C-terminal domain CY96_29685 PF00501 AMP-binding enzyme CY96_29685 PF00109 Beta-ketoacyl synthase, N-terminal domain CY96_29685 PF16197 Ketoacyl-synthetase C-terminal extension CY96_29685 PF02801 Beta-ketoacyl synthase, C-terminal domain CY96_29685 PF08659 KR domain CY96_29685 PF00550 Phosphopantetheine attachment site CY96_29685 PF13193 AMP-binding enzyme C-terminal domain CY96_29685 PF14765 Polyketide synthase dehydratase CY96_29685 PF00550 Phosphopantetheine attachment site CY96_29685 PF00501 AMP-binding enzyme CY96_29685 PF00668 Condensation domain CY96_29695 PF00072 Response regulator receiver domain CY96_29695 PF04397 LytTr DNA-binding domain CY96_29735 PF00550 Phosphopantetheine attachment site CY96_29735 PF13193 AMP-binding enzyme C-terminal domain CY96_29735 PF00668 Condensation domain CY96_29735 PF00975 Thioesterase domain CY96_29735 PF00501 AMP-binding enzyme CY96_29740 PF00248 Aldo/keto reductase family CY96_29760 PF01381 Helix-turn-helix CY96_29900 PF00580 UvrD/REP helicase N-terminal domain CY96_29900 PF13361 UvrD-like helicase C-terminal domain CY96_29905 PF02463 RecF/RecN/SMC N terminal domain