locus-tag class description AMR71_00005 PF01336 OB-fold nucleic acid binding domain AMR71_00005 PF00152 tRNA synthetases class II (D, K and N) AMR71_00010 PF01207 Dihydrouridine synthase (Dus) AMR71_00015 PF01381 Helix-turn-helix AMR71_00020 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AMR71_00025 PF02152 Dihydroneopterin aldolase AMR71_00030 PF00809 Pterin binding enzyme AMR71_00035 PF01063 Amino-transferase class IV AMR71_00040 PF00117 Glutamine amidotransferase class-I AMR71_00045 PF04715 Anthranilate synthase component I, N terminal region AMR71_00045 PF00425 chorismate binding enzyme AMR71_00050 PF00291 Pyridoxal-phosphate dependent enzyme AMR71_00055 PF13145 PPIC-type PPIASE domain AMR71_00060 PF01430 Hsp33 protein AMR71_00065 PF03309 Type III pantothenate kinase AMR71_00070 PF01434 Peptidase family M41 AMR71_00070 PF06480 FtsH Extracellular AMR71_00070 PF17862 AAA+ lid domain AMR71_00070 PF00004 ATPase family associated with various cellular activities (AAA) AMR71_00080 PF01171 PP-loop family AMR71_00080 PF09179 TilS substrate binding domain AMR71_00080 PF11734 TilS substrate C-terminal domain AMR71_00085 PF00069 Protein kinase domain AMR71_00090 PF00092 von Willebrand factor type A domain AMR71_00095 PF07228 Stage II sporulation protein E (SpoIIE) AMR71_00110 PF00575 S1 RNA binding domain AMR71_00115 PF04977 Septum formation initiator AMR71_00120 PF09578 Spore cortex protein YabQ (Spore_YabQ) AMR71_00125 PF07873 YabP family AMR71_00130 PF01479 S4 domain AMR71_00135 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMR71_00135 PF03819 MazG nucleotide pyrophosphohydrolase domain AMR71_00140 PF01943 Polysaccharide biosynthesis protein AMR71_00140 PF14667 Polysaccharide biosynthesis C-terminal domain AMR71_00145 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AMR71_00145 PF15714 Stage V sporulation protein T C-terminal, transcription factor AMR71_00150 PF02559 CarD-like/TRCF domain AMR71_00150 PF00270 DEAD/DEAH box helicase AMR71_00150 PF00271 Helicase conserved C-terminal domain AMR71_00150 PF03461 TRCF domain AMR71_00150 PF17757 UvrB interaction domain AMR71_00155 PF10955 Protein of unknown function (DUF2757) AMR71_00160 PF01195 Peptidyl-tRNA hydrolase AMR71_00165 PF14693 Ribosomal protein TL5, C-terminal domain AMR71_00165 PF01386 Ribosomal L25p family AMR71_00170 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AMR71_00170 PF14572 Phosphoribosyl synthetase-associated domain AMR71_00175 PF00483 Nucleotidyl transferase AMR71_00175 PF00132 Bacterial transferase hexapeptide (six repeats) AMR71_00180 PF04026 SpoVG AMR71_00185 PF01042 Endoribonuclease L-PSP AMR71_00190 PF09182 Bacterial purine repressor, N-terminal AMR71_00190 PF00156 Phosphoribosyl transferase domain AMR71_00195 PF08544 GHMP kinases C terminal AMR71_00195 PF00288 GHMP kinases N terminal domain AMR71_00200 PF00269 Small, acid-soluble spore proteins, alpha/beta type AMR71_00205 PF06257 Biofilm formation stimulator VEG AMR71_00210 PF05582 YabG peptidase U57 AMR71_00215 PF00398 Ribosomal RNA adenine dimethylase AMR71_00220 PF13331 Domain of unknown function (DUF4093) AMR71_00220 PF13662 Toprim domain AMR71_00225 PF06725 3D domain AMR71_00225 PF03990 G5-linked-Ubiquitin-like domain AMR71_00225 PF07501 G5 domain AMR71_00230 PF01026 TatD related DNase AMR71_00235 PF08264 Anticodon-binding domain of tRNA AMR71_00235 PF09334 tRNA synthetases class I (M) AMR71_00235 PF01588 Putative tRNA binding domain AMR71_00240 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AMR71_00240 PF18277 AbrB C-terminal domain AMR71_00245 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMR71_00250 PF01541 GIY-YIG catalytic domain AMR71_00255 PF05175 Methyltransferase small domain AMR71_00260 PF06156 Initiation control protein YabA AMR71_00265 PF04468 PSP1 C-terminal conserved region AMR71_00270 PF09115 DNA polymerase III, delta subunit, C terminal AMR71_00275 PF03885 Protein of unknown function (DUF327) AMR71_00280 PF06153 Cyclic-di-AMP receptor AMR71_00285 PF02223 Thymidylate kinase AMR71_00290 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AMR71_00290 PF01276 Orn/Lys/Arg decarboxylase, major domain AMR71_00295 PF05816 Toxic anion resistance protein (TelA) AMR71_00300 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein AMR71_00305 PF10764 Inhibitor of sigma-G Gin AMR71_00335 PF07441 SigmaK-factor processing regulatory protein BofA AMR71_00340 PF10704 Protein of unknown function (DUF2508) AMR71_00345 PF02132 RecR protein AMR71_00345 PF13662 Toprim domain AMR71_00350 PF02575 YbaB/EbfC DNA-binding family AMR71_00355 PF12169 DNA polymerase III subunits gamma and tau domain III AMR71_00360 PF14437 MafB19-like deaminase AMR71_00365 PF00857 Isochorismatase family AMR71_00370 PF00704 Glycosyl hydrolases family 18 AMR71_00370 PF01476 LysM domain AMR71_00375 PF01712 Deoxynucleoside kinase AMR71_00380 PF01712 Deoxynucleoside kinase AMR71_00390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMR71_00395 PF02403 Seryl-tRNA synthetase N-terminal domain AMR71_00395 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMR71_00400 PF01174 SNO glutamine amidotransferase family AMR71_00405 PF01680 SOR/SNZ family AMR71_00410 PF00392 Bacterial regulatory proteins, gntR family AMR71_00410 PF00155 Aminotransferase class I and II AMR71_00415 PF07943 Penicillin-binding protein 5, C-terminal domain AMR71_00415 PF00768 D-alanyl-D-alanine carboxypeptidase AMR71_00420 PF00571 CBS domain AMR71_00420 PF00478 IMP dehydrogenase / GMP reductase domain AMR71_00425 PF14175 YaaC-like Protein AMR71_00455 PF03989 DNA gyrase C-terminal domain, beta-propeller AMR71_00455 PF00521 DNA gyrase/topoisomerase IV, subunit A AMR71_00460 PF01751 Toprim domain AMR71_00460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMR71_00460 PF00986 DNA gyrase B subunit, carboxyl terminus AMR71_00460 PF00204 DNA gyrase B AMR71_00465 PF04025 Domain of unknown function (DUF370) AMR71_00470 PF02463 RecF/RecN/SMC N terminal domain AMR71_00480 PF02768 DNA polymerase III beta subunit, C-terminal domain AMR71_00480 PF02767 DNA polymerase III beta subunit, central domain AMR71_00480 PF00712 DNA polymerase III beta subunit, N-terminal domain AMR71_00485 PF00308 Bacterial dnaA protein AMR71_00485 PF08299 Bacterial dnaA protein helix-turn-helix AMR71_00485 PF11638 DnaA N-terminal domain AMR71_00490 PF00468 Ribosomal protein L34 AMR71_00495 PF00825 Ribonuclease P AMR71_00500 PF02096 60Kd inner membrane protein AMR71_00505 PF14804 Jag N-terminus AMR71_00505 PF01424 R3H domain AMR71_00510 PF10396 GTP-binding protein TrmE N-terminus AMR71_00510 PF12631 MnmE helical domain AMR71_00510 PF01926 50S ribosome-binding GTPase AMR71_00515 PF01134 Glucose inhibited division protein A AMR71_00515 PF13932 GidA associated domain AMR71_00520 PF02527 rRNA small subunit methyltransferase G AMR71_00525 PF02195 ParB-like nuclease domain AMR71_00525 PF17762 HTH domain found in ParB protein AMR71_00535 PF13614 AAA domain AMR71_00540 PF17762 HTH domain found in ParB protein AMR71_00540 PF02195 ParB-like nuclease domain AMR71_00545 PF06866 Protein of unknown function (DUF1256) AMR71_00565 PF06107 Bacterial protein of unknown function (DUF951) AMR71_00570 PF06071 Protein of unknown function (DUF933) AMR71_00570 PF01926 50S ribosome-binding GTPase AMR71_00575 PF01250 Ribosomal protein S6 AMR71_00580 PF00436 Single-strand binding protein family AMR71_00585 PF01084 Ribosomal protein S18 AMR71_00590 PF00005 ABC transporter AMR71_00590 PF00571 CBS domain AMR71_00595 PF00528 Binding-protein-dependent transport system inner membrane component AMR71_00600 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMR71_00605 PF01738 Dienelactone hydrolase family AMR71_00610 PF03358 NADPH-dependent FMN reductase AMR71_00615 PF06628 Catalase-related immune-responsive AMR71_00615 PF00199 Catalase AMR71_00625 PF08281 Sigma-70, region 4 AMR71_00625 PF04542 Sigma-70 region 2 AMR71_00630 PF13739 Deacetylase PdaC AMR71_00630 PF11738 Protein of unknown function (DUF3298) AMR71_00635 PF01368 DHH family AMR71_00635 PF02833 DHHA2 domain AMR71_00640 PF09991 Predicted membrane protein (DUF2232) AMR71_00645 PF01368 DHH family AMR71_00645 PF02272 DHHA1 domain AMR71_00650 PF03948 Ribosomal protein L9, C-terminal domain AMR71_00650 PF01281 Ribosomal protein L9, N-terminal domain AMR71_00655 PF07690 Major Facilitator Superfamily AMR71_00660 PF00756 Putative esterase AMR71_00665 PF01497 Periplasmic binding protein AMR71_00670 PF12833 Helix-turn-helix domain AMR71_00670 PF01497 Periplasmic binding protein AMR71_00675 PF00756 Putative esterase AMR71_00690 PF16226 Domain of unknown function (DUF4885) AMR71_00695 PF00772 DnaB-like helicase N terminal domain AMR71_00695 PF03796 DnaB-like helicase C terminal domain AMR71_00700 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMR71_00705 PF00067 Cytochrome P450 AMR71_00710 PF00440 Bacterial regulatory proteins, tetR family AMR71_00715 PF00709 Adenylosuccinate synthetase AMR71_00720 PF04235 Protein of unknown function (DUF418) AMR71_00730 PF00578 AhpC/TSA family AMR71_00755 PF00486 Transcriptional regulatory protein, C terminal AMR71_00755 PF00072 Response regulator receiver domain AMR71_00760 PF00672 HAMP domain AMR71_00760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMR71_00760 PF13426 PAS domain AMR71_00760 PF00512 His Kinase A (phospho-acceptor) domain AMR71_00765 PF07435 YycH protein AMR71_00770 PF09648 YycH protein AMR71_00775 PF00753 Metallo-beta-lactamase superfamily AMR71_00780 PF13180 PDZ domain AMR71_00785 PF00583 Acetyltransferase (GNAT) family AMR71_00790 PF00005 ABC transporter AMR71_00805 PF07155 ECF-type riboflavin transporter, S component AMR71_00810 PF12558 ATP-binding cassette cobalt transporter AMR71_00810 PF00005 ABC transporter AMR71_00815 PF02361 Cobalt transport protein AMR71_00820 PF02590 Predicted SPOUT methyltransferase AMR71_00850 PF03176 MMPL family AMR71_00850 PF12823 Domain of unknown function (DUF3817) AMR71_00855 PF00486 Transcriptional regulatory protein, C terminal AMR71_00855 PF00072 Response regulator receiver domain AMR71_00860 PF00512 His Kinase A (phospho-acceptor) domain AMR71_00860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMR71_00860 PF00672 HAMP domain AMR71_00875 PF00027 Cyclic nucleotide-binding domain AMR71_00875 PF13545 Crp-like helix-turn-helix domain AMR71_00895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMR71_00895 PF03466 LysR substrate binding domain AMR71_00900 PF02567 Phenazine biosynthesis-like protein AMR71_00915 PF07702 UTRA domain AMR71_00915 PF00392 Bacterial regulatory proteins, gntR family AMR71_00920 PF00367 phosphotransferase system, EIIB AMR71_00920 PF02378 Phosphotransferase system, EIIC AMR71_00920 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AMR71_00925 PF00232 Glycosyl hydrolase family 1 AMR71_00955 PF07690 Major Facilitator Superfamily AMR71_00960 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AMR71_00960 PF08501 Shikimate dehydrogenase substrate binding domain AMR71_00965 PF07690 Major Facilitator Superfamily AMR71_00975 PF00324 Amino acid permease AMR71_00990 PF00293 NUDIX domain AMR71_01015 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AMR71_01015 PF00367 phosphotransferase system, EIIB AMR71_01015 PF02378 Phosphotransferase system, EIIC AMR71_01020 PF00232 Glycosyl hydrolase family 1 AMR71_01025 PF03123 CAT RNA binding domain AMR71_01025 PF00874 PRD domain AMR71_01030 PF18801 response regulator aspartate phosphatase H, N terminal AMR71_01040 PF00005 ABC transporter AMR71_01050 PF07690 Major Facilitator Superfamily AMR71_01055 PF17922 Tetracyclin repressor-like, C-terminal domain AMR71_01055 PF00440 Bacterial regulatory proteins, tetR family AMR71_01060 PF13556 PucR C-terminal helix-turn-helix domain AMR71_01060 PF17853 GGDEF-like domain AMR71_01060 PF05651 Putative sugar diacid recognition AMR71_01065 PF02447 GntP family permease AMR71_01070 PF02595 Glycerate kinase family AMR71_01075 PF03831 PhnA domain AMR71_01075 PF08274 PhnA Zinc-Ribbon AMR71_01080 PF00005 ABC transporter AMR71_01085 PF12679 ABC-2 family transporter protein AMR71_01095 PF03600 Citrate transporter AMR71_01100 PF02449 Beta-galactosidase AMR71_01100 PF08533 Beta-galactosidase C-terminal domain AMR71_01100 PF08532 Beta-galactosidase trimerisation domain AMR71_01105 PF07745 Glycosyl hydrolase family 53 AMR71_01110 PF00528 Binding-protein-dependent transport system inner membrane component AMR71_01115 PF00528 Binding-protein-dependent transport system inner membrane component AMR71_01120 PF13416 Bacterial extracellular solute-binding protein AMR71_01125 PF00356 Bacterial regulatory proteins, lacI family AMR71_01130 PF03466 LysR substrate binding domain AMR71_01130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMR71_01165 PF01156 Inosine-uridine preferring nucleoside hydrolase AMR71_01170 PF01418 Helix-turn-helix domain, rpiR family AMR71_01170 PF01380 SIS domain AMR71_01175 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMR71_01175 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMR71_01180 PF02447 GntP family permease AMR71_01185 PF08713 DNA alkylation repair enzyme AMR71_01190 PF00324 Amino acid permease AMR71_01195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMR71_01200 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMR71_01205 PF13411 MerR HTH family regulatory protein AMR71_01215 PF00072 Response regulator receiver domain AMR71_01215 PF00196 Bacterial regulatory proteins, luxR family AMR71_01220 PF13649 Methyltransferase domain AMR71_01225 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AMR71_01225 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AMR71_01225 PF01488 Shikimate / quinate 5-dehydrogenase AMR71_01230 PF07690 Major Facilitator Superfamily AMR71_01235 PF01757 Acyltransferase family AMR71_01245 PF04198 Putative sugar-binding domain AMR71_01250 PF01791 DeoC/LacD family aldolase AMR71_01255 PF07662 Na+ dependent nucleoside transporter C-terminus AMR71_01255 PF01773 Na+ dependent nucleoside transporter N-terminus AMR71_01260 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AMR71_01260 PF00591 Glycosyl transferase family, a/b domain AMR71_01260 PF02885 Glycosyl transferase family, helical bundle domain AMR71_01265 PF01047 MarR family AMR71_01270 PF00881 Nitroreductase family AMR71_01275 PF03992 Antibiotic biosynthesis monooxygenase AMR71_01280 PF00801 PKD domain AMR71_01280 PF05547 Immune inhibitor A peptidase M6 AMR71_01310 PF03070 TENA/THI-4/PQQC family AMR71_01315 PF09819 ABC-type cobalt transport system, permease component AMR71_01320 PF00005 ABC transporter AMR71_01325 PF02361 Cobalt transport protein AMR71_01335 PF09234 Domain of unknown function (DUF1963) AMR71_01340 PF00874 PRD domain AMR71_01340 PF03123 CAT RNA binding domain AMR71_01345 PF02378 Phosphotransferase system, EIIC AMR71_01345 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AMR71_01345 PF00367 phosphotransferase system, EIIB AMR71_01350 PF00232 Glycosyl hydrolase family 1 AMR71_01375 PF01717 Cobalamin-independent synthase, Catalytic domain AMR71_01380 PF02447 GntP family permease AMR71_01390 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMR71_01390 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMR71_01395 PF01380 SIS domain AMR71_01395 PF01418 Helix-turn-helix domain, rpiR family AMR71_01410 PF07687 Peptidase dimerisation domain AMR71_01410 PF01546 Peptidase family M20/M25/M40 AMR71_01415 PF06013 Proteins of 100 residues with WXG AMR71_01430 PF17353 Family of unknown function (DUF5381) AMR71_01440 PF01381 Helix-turn-helix AMR71_01445 PF17763 Glutaminase/Asparaginase C-terminal domain AMR71_01445 PF00710 Asparaginase, N-terminal AMR71_01450 PF00206 Lyase AMR71_01450 PF10415 Fumarase C C-terminus AMR71_01455 PF03553 Na+/H+ antiporter family AMR71_01480 PF08279 HTH domain AMR71_01480 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AMR71_01480 PF00874 PRD domain AMR71_01480 PF05043 Mga helix-turn-helix domain AMR71_01485 PF02378 Phosphotransferase system, EIIC AMR71_01490 PF03786 D-mannonate dehydratase (UxuA) AMR71_01495 PF00232 Glycosyl hydrolase family 1 AMR71_01500 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AMR71_01505 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AMR71_01510 PF01522 Polysaccharide deacetylase AMR71_01520 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMR71_01520 PF01872 RibD C-terminal domain AMR71_01525 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AMR71_01525 PF00925 GTP cyclohydrolase II AMR71_01530 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMR71_01535 PF01638 HxlR-like helix-turn-helix AMR71_01540 PF05031 Iron Transport-associated domain AMR71_01545 PF05031 Iron Transport-associated domain AMR71_01555 PF01497 Periplasmic binding protein AMR71_01560 PF01032 FecCD transport family AMR71_01565 PF00005 ABC transporter AMR71_01570 PF04203 Sortase domain AMR71_01575 PF01497 Periplasmic binding protein AMR71_01580 PF01032 FecCD transport family AMR71_01585 PF00005 ABC transporter AMR71_01590 PF01654 Cytochrome bd terminal oxidase subunit I AMR71_01595 PF02322 Cytochrome bd terminal oxidase subunit II AMR71_01600 PF00005 ABC transporter AMR71_01600 PF00664 ABC transporter transmembrane region AMR71_01605 PF00664 ABC transporter transmembrane region AMR71_01605 PF00005 ABC transporter AMR71_01610 PF00544 Pectate lyase AMR71_01615 PF08281 Sigma-70, region 4 AMR71_01615 PF04542 Sigma-70 region 2 AMR71_01630 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AMR71_01630 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AMR71_01645 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AMR71_01645 PF05043 Mga helix-turn-helix domain AMR71_01645 PF08279 HTH domain AMR71_01645 PF00874 PRD domain AMR71_01650 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AMR71_01655 PF02378 Phosphotransferase system, EIIC AMR71_01660 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AMR71_01665 PF11975 Family 4 glycosyl hydrolase C-terminal domain AMR71_01665 PF02056 Family 4 glycosyl hydrolase AMR71_01680 PF01063 Amino-transferase class IV AMR71_01685 PF13229 Right handed beta helix region AMR71_01690 PF13407 Periplasmic binding protein domain AMR71_01695 PF00005 ABC transporter AMR71_01700 PF02653 Branched-chain amino acid transport system / permease component AMR71_01705 PF04607 Region found in RelA / SpoT proteins AMR71_01710 PF18801 response regulator aspartate phosphatase H, N terminal AMR71_01715 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMR71_01720 PF00528 Binding-protein-dependent transport system inner membrane component AMR71_01725 PF00005 ABC transporter AMR71_01735 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMR71_01740 PF10672 S-adenosylmethionine-dependent methyltransferase AMR71_01740 PF17785 PUA-like domain AMR71_01745 PF04172 LrgB-like family AMR71_01750 PF03788 LrgA family AMR71_01755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMR71_01755 PF03466 LysR substrate binding domain AMR71_01760 PF02110 Hydroxyethylthiazole kinase family AMR71_01765 PF02581 Thiamine monophosphate synthase AMR71_01780 PF00474 Sodium:solute symporter family AMR71_01785 PF04341 Protein of unknown function, DUF485 AMR71_01805 PF04138 GtrA-like protein AMR71_01820 PF00288 GHMP kinases N terminal domain AMR71_01820 PF08544 GHMP kinases C terminal AMR71_01820 PF10509 Galactokinase galactose-binding signature AMR71_01825 PF16363 GDP-mannose 4,6 dehydratase AMR71_01830 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AMR71_01830 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AMR71_01840 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AMR71_01840 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AMR71_01845 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMR71_01850 PF00510 Cytochrome c oxidase subunit III AMR71_01855 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AMR71_01860 PF17368 Spore morphogenesis and germination YwcE AMR71_01865 PF01098 Cell cycle protein AMR71_01870 PF00881 Nitroreductase family AMR71_01875 PF00296 Luciferase-like monooxygenase AMR71_01885 PF13860 FlgD Ig-like domain AMR71_01885 PF02225 PA domain AMR71_01885 PF00082 Subtilase family AMR71_01885 PF05922 Peptidase inhibitor I9 AMR71_01895 PF03123 CAT RNA binding domain AMR71_01895 PF00874 PRD domain AMR71_01900 PF02378 Phosphotransferase system, EIIC AMR71_01900 PF00367 phosphotransferase system, EIIB AMR71_01905 PF08244 Glycosyl hydrolases family 32 C terminal AMR71_01905 PF00251 Glycosyl hydrolases family 32 N-terminal domain AMR71_01920 PF08543 Phosphomethylpyrimidine kinase AMR71_01930 PF00535 Glycosyl transferase family 2 AMR71_01935 PF03167 Uracil DNA glycosylase superfamily AMR71_01940 PF00171 Aldehyde dehydrogenase family AMR71_01945 PF17261 Family of unknown function (DUF5327) AMR71_01950 PF00860 Permease family AMR71_01955 PF04241 Protein of unknown function (DUF423) AMR71_01965 PF09671 Spore coat protein (Spore_GerQ) AMR71_01975 PF00535 Glycosyl transferase family 2 AMR71_01980 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AMR71_01985 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMR71_01990 PF00583 Acetyltransferase (GNAT) family AMR71_01995 PF03102 NeuB family AMR71_01995 PF08666 SAF domain AMR71_02000 PF02348 Cytidylyltransferase AMR71_02005 PF04101 Glycosyltransferase family 28 C-terminal domain AMR71_02010 PF00483 Nucleotidyl transferase AMR71_02015 PF16363 GDP-mannose 4,6 dehydratase AMR71_02020 PF04321 RmlD substrate binding domain AMR71_02025 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AMR71_02035 PF00155 Aminotransferase class I and II AMR71_02050 PF07883 Cupin domain AMR71_02060 PF07690 Major Facilitator Superfamily AMR71_02065 PF01037 Lrp/AsnC ligand binding domain AMR71_02070 PF07690 Major Facilitator Superfamily AMR71_02080 PF01515 Phosphate acetyl/butaryl transferase AMR71_02090 PF03737 Aldolase/RraA AMR71_02120 PF14449 Pre-toxin TG AMR71_02120 PF04740 LXG domain of WXG superfamily AMR71_02145 PF03099 Biotin/lipoate A/B protein ligase family AMR71_02155 PF00535 Glycosyl transferase family 2 AMR71_02155 PF07238 PilZ domain AMR71_02170 PF07293 Protein of unknown function (DUF1450) AMR71_02175 PF01966 HD domain AMR71_02190 PF01361 Tautomerase enzyme AMR71_02195 PF02163 Peptidase family M50 AMR71_02200 PF08741 YwhD family AMR71_02205 PF00905 Penicillin binding protein transpeptidase domain AMR71_02205 PF00912 Transglycosylase AMR71_02210 PF17284 Spermidine synthase tetramerisation domain AMR71_02215 PF00491 Arginase family AMR71_02225 PF09148 Domain of unknown function (DUF1934) AMR71_02230 PF03485 Arginyl tRNA synthetase N terminal domain AMR71_02230 PF05746 DALR anticodon binding domain AMR71_02230 PF00750 tRNA synthetases class I (R) AMR71_02235 PF17676 LD-carboxypeptidase C-terminal domain AMR71_02235 PF02016 LD-carboxypeptidase N-terminal domain AMR71_02240 PF13091 PLD-like domain AMR71_02240 PF13396 Phospholipase_D-nuclease N-terminal AMR71_02245 PF00005 ABC transporter AMR71_02245 PF00664 ABC transporter transmembrane region AMR71_02250 PF17676 LD-carboxypeptidase C-terminal domain AMR71_02250 PF02016 LD-carboxypeptidase N-terminal domain AMR71_02260 PF03851 UV-endonuclease UvdE AMR71_02265 PF13091 PLD-like domain AMR71_02270 PF02754 Cysteine-rich domain AMR71_02270 PF13183 4Fe-4S dicluster domain AMR71_02275 PF02803 Thiolase, C-terminal domain AMR71_02275 PF00108 Thiolase, N-terminal domain AMR71_02280 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMR71_02280 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMR71_02285 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMR71_02285 PF02770 Acyl-CoA dehydrogenase, middle domain AMR71_02285 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMR71_02290 PF02770 Acyl-CoA dehydrogenase, middle domain AMR71_02290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMR71_02290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMR71_02315 PF00005 ABC transporter AMR71_02325 PF05066 HB1, ASXL, restriction endonuclease HTH domain AMR71_02330 PF06418 CTP synthase N-terminus AMR71_02330 PF00117 Glutamine amidotransferase class-I AMR71_02335 PF10740 Domain of unknown function (DUF2529) AMR71_02340 PF00072 Response regulator receiver domain AMR71_02345 PF01116 Fructose-bisphosphate aldolase class-II AMR71_02350 PF00923 Transaldolase/Fructose-6-phosphate aldolase AMR71_02355 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMR71_02360 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AMR71_02365 PF07497 Rho termination factor, RNA-binding domain AMR71_02365 PF07498 Rho termination factor, N-terminal domain AMR71_02365 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMR71_02370 PF01197 Ribosomal protein L31 AMR71_02375 PF00265 Thymidine kinase AMR71_02380 PF03949 Malic enzyme, NAD binding domain AMR71_02380 PF00390 Malic enzyme, N-terminal domain AMR71_02385 PF03547 Membrane transport protein AMR71_02390 PF13411 MerR HTH family regulatory protein AMR71_02395 PF00472 RF-1 domain AMR71_02395 PF03462 PCRF domain AMR71_02400 PF17827 PrmC N-terminal domain AMR71_02400 PF05175 Methyltransferase small domain AMR71_02410 PF09551 Stage II sporulation protein R (spore_II_R) AMR71_02420 PF01300 Telomere recombination AMR71_02420 PF03481 Putative GTP-binding controlling metal-binding AMR71_02425 PF02659 Putative manganese efflux pump AMR71_02430 PF01451 Low molecular weight phosphotyrosine protein phosphatase AMR71_02435 PF02502 Ribose/Galactose Isomerase AMR71_02440 PF04260 Protein of unknown function (DUF436) AMR71_02445 PF00464 Serine hydroxymethyltransferase AMR71_02455 PF03899 ATP synthase I chain AMR71_02460 PF00119 ATP synthase A chain AMR71_02465 PF00137 ATP synthase subunit C AMR71_02470 PF00430 ATP synthase B/B' CF(0) AMR71_02475 PF00213 ATP synthase delta (OSCP) subunit AMR71_02480 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMR71_02480 PF00306 ATP synthase alpha/beta chain, C terminal domain AMR71_02480 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMR71_02485 PF00231 ATP synthase AMR71_02490 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMR71_02490 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMR71_02495 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AMR71_02495 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AMR71_02505 PF06612 Protein of unknown function (DUF1146) AMR71_02510 PF08680 TATA-box binding AMR71_02515 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMR71_02520 PF08486 Stage II sporulation protein AMR71_02525 PF00092 von Willebrand factor type A domain AMR71_02530 PF00092 von Willebrand factor type A domain AMR71_02535 PF00384 Molybdopterin oxidoreductase AMR71_02535 PF18364 Molybdopterin oxidoreductase N-terminal domain AMR71_02535 PF01568 Molydopterin dinucleotide binding domain AMR71_02540 PF07690 Major Facilitator Superfamily AMR71_02545 PF02634 FdhD/NarQ family AMR71_02550 PF04055 Radical SAM superfamily AMR71_02550 PF06463 Molybdenum Cofactor Synthesis C AMR71_02555 PF00253 Ribosomal protein S14p/S29e AMR71_02560 PF07683 Cobalamin synthesis protein cobW C-terminal domain AMR71_02560 PF02492 CobW/HypB/UreG, nucleotide-binding domain AMR71_02565 PF00471 Ribosomal protein L33 AMR71_02575 PF00583 Acetyltransferase (GNAT) family AMR71_02580 PF01551 Peptidase family M23 AMR71_02585 PF00543 Nitrogen regulatory protein P-II AMR71_02590 PF00909 Ammonium Transporter Family AMR71_02595 PF00005 ABC transporter AMR71_02600 PF00528 Binding-protein-dependent transport system inner membrane component AMR71_02605 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMR71_02610 PF07690 Major Facilitator Superfamily AMR71_02615 PF01569 PAP2 superfamily AMR71_02620 PF07690 Major Facilitator Superfamily AMR71_02625 PF01047 MarR family AMR71_02630 PF12116 Stage III sporulation protein D AMR71_02640 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMR71_02640 PF00460 Flagella basal body rod protein AMR71_02645 PF00460 Flagella basal body rod protein AMR71_02645 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMR71_02650 PF18801 response regulator aspartate phosphatase H, N terminal AMR71_02655 PF07977 FabA-like domain AMR71_02660 PF01741 Large-conductance mechanosensitive channel, MscL AMR71_02665 PF14183 YwpF-like protein AMR71_02680 PF01740 STAS domain AMR71_02680 PF13426 PAS domain AMR71_02685 PF00271 Helicase conserved C-terminal domain AMR71_02685 PF00176 SNF2 family N-terminal domain AMR71_02685 PF12419 SNF2 Helicase protein AMR71_02690 PF04434 SWIM zinc finger AMR71_02695 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMR71_02695 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMR71_02695 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMR71_02700 PF02417 Chromate transporter AMR71_02705 PF02417 Chromate transporter AMR71_02710 PF13404 AsnC-type helix-turn-helix domain AMR71_02710 PF01037 Lrp/AsnC ligand binding domain AMR71_02715 PF03306 Alpha-acetolactate decarboxylase AMR71_02720 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMR71_02720 PF00205 Thiamine pyrophosphate enzyme, central domain AMR71_02720 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMR71_02725 PF03466 LysR substrate binding domain AMR71_02725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMR71_02730 PF01613 Flavin reductase like domain AMR71_02735 PF13407 Periplasmic binding protein domain AMR71_02740 PF02653 Branched-chain amino acid transport system / permease component AMR71_02745 PF00005 ABC transporter AMR71_02750 PF05025 RbsD / FucU transport protein family AMR71_02755 PF00294 pfkB family carbohydrate kinase AMR71_02760 PF00356 Bacterial regulatory proteins, lacI family AMR71_02765 PF05504 Spore germination B3/ GerAC like, C-terminal AMR71_02775 PF03323 Bacillus/Clostridium GerA spore germination protein AMR71_02780 PF08245 Mur ligase middle domain AMR71_02785 PF14102 Capsule biosynthesis CapC AMR71_02790 PF09587 Bacterial capsule synthesis protein PGA_cap AMR71_02795 PF00877 NlpC/P60 family AMR71_02805 PF03816 Cell envelope-related transcriptional attenuator domain AMR71_02810 PF00083 Sugar (and other) transporter AMR71_02815 PF00534 Glycosyl transferases group 1 AMR71_02815 PF00535 Glycosyl transferase family 2 AMR71_02820 PF05504 Spore germination B3/ GerAC like, C-terminal AMR71_02825 PF03845 Spore germination protein AMR71_02830 PF03323 Bacillus/Clostridium GerA spore germination protein AMR71_02840 PF04962 KduI/IolB family AMR71_02845 PF00356 Bacterial regulatory proteins, lacI family AMR71_02850 PF00294 pfkB family carbohydrate kinase AMR71_02855 PF01081 KDPG and KHG aldolase AMR71_02860 PF00583 Acetyltransferase (GNAT) family AMR71_02870 PF02743 Cache domain AMR71_02870 PF00672 HAMP domain AMR71_02870 PF06580 Histidine kinase AMR71_02870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMR71_02875 PF00072 Response regulator receiver domain AMR71_02875 PF00196 Bacterial regulatory proteins, luxR family AMR71_02880 PF01547 Bacterial extracellular solute-binding protein AMR71_02885 PF00528 Binding-protein-dependent transport system inner membrane component AMR71_02890 PF00528 Binding-protein-dependent transport system inner membrane component AMR71_02895 PF01238 Phosphomannose isomerase type I AMR71_02900 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AMR71_02905 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AMR71_02905 PF08239 Bacterial SH3 domain AMR71_02905 PF05036 Sporulation related domain AMR71_02910 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AMR71_02915 PF03808 Glycosyl transferase WecB/TagA/CpsF family AMR71_02920 PF01467 Cytidylyltransferase-like AMR71_02930 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AMR71_02935 PF00483 Nucleotidyl transferase AMR71_02940 PF16363 GDP-mannose 4,6 dehydratase AMR71_02945 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AMR71_02950 PF01820 D-ala D-ala ligase N-terminus AMR71_02950 PF07478 D-ala D-ala ligase C-terminus AMR71_02955 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMR71_02960 PF00535 Glycosyl transferase family 2 AMR71_02965 PF01061 ABC-2 type transporter AMR71_02970 PF00005 ABC transporter AMR71_02975 PF00483 Nucleotidyl transferase AMR71_02980 PF02350 UDP-N-acetylglucosamine 2-epimerase AMR71_02985 PF03816 Cell envelope-related transcriptional attenuator domain AMR71_02995 PF08486 Stage II sporulation protein AMR71_02995 PF04122 Putative cell wall binding repeat 2 AMR71_03000 PF04122 Putative cell wall binding repeat 2 AMR71_03000 PF01520 N-acetylmuramoyl-L-alanine amidase AMR71_03005 PF01520 N-acetylmuramoyl-L-alanine amidase AMR71_03005 PF04122 Putative cell wall binding repeat 2 AMR71_03015 PF02397 Bacterial sugar transferase AMR71_03020 PF14667 Polysaccharide biosynthesis C-terminal domain AMR71_03020 PF01943 Polysaccharide biosynthesis protein AMR71_03025 PF13439 Glycosyltransferase Family 4 AMR71_03025 PF00534 Glycosyl transferases group 1 AMR71_03030 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMR71_03030 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMR71_03030 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMR71_03035 PF16363 GDP-mannose 4,6 dehydratase AMR71_03040 PF04932 O-Antigen ligase AMR71_03045 PF02706 Chain length determinant protein AMR71_03050 PF00535 Glycosyl transferase family 2 AMR71_03060 PF00953 Glycosyl transferase family 4 AMR71_03065 PF03816 Cell envelope-related transcriptional attenuator domain AMR71_03070 PF01205 Uncharacterized protein family UPF0029 AMR71_03070 PF09186 Domain of unknown function (DUF1949) AMR71_03075 PF07730 Histidine kinase AMR71_03075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMR71_03075 PF05384 Sensor protein DegS AMR71_03080 PF00196 Bacterial regulatory proteins, luxR family AMR71_03080 PF00072 Response regulator receiver domain AMR71_03085 PF02645 Uncharacterised protein, DegV family COG1307 AMR71_03090 PF04851 Type III restriction enzyme, res subunit AMR71_03090 PF00271 Helicase conserved C-terminal domain AMR71_03095 PF10719 Late competence development protein ComFB AMR71_03115 PF05130 FlgN protein AMR71_03120 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMR71_03120 PF00460 Flagella basal body rod protein AMR71_03125 PF00669 Bacterial flagellin N-terminal helical region AMR71_03125 PF00700 Bacterial flagellin C-terminal helical region AMR71_03135 PF02623 FliW protein AMR71_03140 PF02599 Global regulator protein family AMR71_03145 PF03646 FlaG protein AMR71_03150 PF02465 Flagellar hook-associated protein 2 N-terminus AMR71_03150 PF07195 Flagellar hook-associated protein 2 C-terminus AMR71_03150 PF07196 Flagellin hook IN motif AMR71_03155 PF02561 Flagellar protein FliS AMR71_03170 PF00672 HAMP domain AMR71_03170 PF02743 Cache domain AMR71_03170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMR71_03175 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AMR71_03175 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus AMR71_03180 PF07516 SecA Wing and Scaffold domain AMR71_03180 PF01043 SecA preprotein cross-linking domain AMR71_03180 PF07517 SecA DEAD-like domain AMR71_03180 PF02810 SEC-C motif AMR71_03185 PF00472 RF-1 domain AMR71_03185 PF03462 PCRF domain AMR71_03200 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AMR71_03200 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AMR71_03205 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMR71_03210 PF00005 ABC transporter AMR71_03215 PF18075 FtsX extracellular domain AMR71_03215 PF02687 FtsX-like permease family AMR71_03220 PF00877 NlpC/P60 family AMR71_03225 PF01925 Sulfite exporter TauE/SafE AMR71_03230 PF01471 Putative peptidoglycan binding domain AMR71_03230 PF17820 PDZ domain AMR71_03230 PF03572 Peptidase family S41 AMR71_03235 PF17423 Swarming motility protein AMR71_03240 PF17820 PDZ domain AMR71_03245 PF01638 HxlR-like helix-turn-helix AMR71_03250 PF00881 Nitroreductase family AMR71_03255 PF00324 Amino acid permease AMR71_03260 PF00535 Glycosyl transferase family 2 AMR71_03265 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase AMR71_03270 PF00672 HAMP domain AMR71_03270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMR71_03270 PF13426 PAS domain AMR71_03270 PF00512 His Kinase A (phospho-acceptor) domain AMR71_03275 PF00072 Response regulator receiver domain AMR71_03275 PF00486 Transcriptional regulatory protein, C terminal AMR71_03285 PF07690 Major Facilitator Superfamily AMR71_03290 PF00440 Bacterial regulatory proteins, tetR family AMR71_03295 PF00391 PEP-utilising enzyme, mobile domain AMR71_03295 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AMR71_03300 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) AMR71_03310 PF12344 Ultra-violet resistance protein B AMR71_03310 PF00271 Helicase conserved C-terminal domain AMR71_03310 PF17757 UvrB interaction domain AMR71_03310 PF02151 UvrB/uvrC motif AMR71_03310 PF04851 Type III restriction enzyme, res subunit AMR71_03315 PF17755 UvrA DNA-binding domain AMR71_03315 PF17760 UvrA interaction domain AMR71_03315 PF00005 ABC transporter AMR71_03330 PF13349 Putative adhesin AMR71_03335 PF04024 PspC domain AMR71_03340 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV AMR71_03345 PF00149 Calcineurin-like phosphoesterase AMR71_03355 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AMR71_03360 PF01979 Amidohydrolase family AMR71_03365 PF07475 HPr Serine kinase C-terminal domain AMR71_03365 PF02603 HPr Serine kinase N terminus AMR71_03370 PF01790 Prolipoprotein diacylglyceryl transferase AMR71_03375 PF07670 Nucleoside recognition AMR71_03380 PF13419 Haloacid dehalogenase-like hydrolase AMR71_03385 PF14602 Hexapeptide repeat of succinyl-transferase AMR71_03390 PF02082 Transcriptional regulator AMR71_03395 PF13460 NAD(P)H-binding AMR71_03405 PF13529 Peptidase_C39 like family AMR71_03410 PF13393 Histidyl-tRNA synthetase AMR71_03415 PF01634 ATP phosphoribosyltransferase AMR71_03420 PF00815 Histidinol dehydrogenase AMR71_03425 PF00475 Imidazoleglycerol-phosphate dehydratase AMR71_03430 PF00117 Glutamine amidotransferase class-I AMR71_03435 PF00977 Histidine biosynthesis protein AMR71_03440 PF00977 Histidine biosynthesis protein AMR71_03445 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AMR71_03445 PF01502 Phosphoribosyl-AMP cyclohydrolase AMR71_03455 PF00877 NlpC/P60 family AMR71_03460 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMR71_03465 PF00293 NUDIX domain AMR71_03470 PF03668 P-loop ATPase protein family AMR71_03475 PF01933 Uncharacterised protein family UPF0052 AMR71_03480 PF10298 WhiA N-terminal LAGLIDADG-like domain AMR71_03480 PF14527 WhiA LAGLIDADG-like domain AMR71_03480 PF02650 WhiA C-terminal HTH domain AMR71_03485 PF00381 PTS HPr component phosphorylation site AMR71_03490 PF00797 N-acetyltransferase AMR71_03495 PF00545 ribonuclease AMR71_03500 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMR71_03500 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMR71_03505 PF00484 Carbonic anhydrase AMR71_03510 PF00916 Sulfate permease family AMR71_03510 PF01740 STAS domain AMR71_03515 PF03819 MazG nucleotide pyrophosphohydrolase domain AMR71_03520 PF03641 Possible lysine decarboxylase AMR71_03525 PF00574 Clp protease AMR71_03575 PF17356 Phage-like element PBSX protein XtrA AMR71_03620 PF00589 Phage integrase family AMR71_03675 PF00574 Clp protease AMR71_03720 PF01464 Transglycosylase SLT domain AMR71_03730 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AMR71_03730 PF01476 LysM domain AMR71_03755 PF05105 Bacteriophage holin family AMR71_03760 PF01520 N-acetylmuramoyl-L-alanine amidase AMR71_03760 PF05036 Sporulation related domain AMR71_03785 PF01497 Periplasmic binding protein AMR71_03790 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AMR71_03795 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMR71_03800 PF00528 Binding-protein-dependent transport system inner membrane component AMR71_03805 PF00528 Binding-protein-dependent transport system inner membrane component AMR71_03805 PF12911 N-terminal TM domain of oligopeptide transport permease C AMR71_03810 PF00005 ABC transporter AMR71_03815 PF00005 ABC transporter AMR71_03825 PF11738 Protein of unknown function (DUF3298) AMR71_03825 PF13739 Deacetylase PdaC AMR71_03825 PF01522 Polysaccharide deacetylase AMR71_03830 PF01032 FecCD transport family AMR71_03835 PF01032 FecCD transport family AMR71_03840 PF01497 Periplasmic binding protein AMR71_03850 PF08671 Anti-repressor SinI AMR71_03850 PF01381 Helix-turn-helix AMR71_03855 PF02706 Chain length determinant protein AMR71_03860 PF13614 AAA domain AMR71_03865 PF02719 Polysaccharide biosynthesis protein AMR71_03870 PF13439 Glycosyltransferase Family 4 AMR71_03870 PF00534 Glycosyl transferases group 1 AMR71_03875 PF00535 Glycosyl transferase family 2 AMR71_03880 PF13439 Glycosyltransferase Family 4 AMR71_03880 PF00534 Glycosyl transferases group 1 AMR71_03890 PF00535 Glycosyl transferase family 2 AMR71_03895 PF04230 Polysaccharide pyruvyl transferase AMR71_03900 PF01943 Polysaccharide biosynthesis protein AMR71_03900 PF14667 Polysaccharide biosynthesis C-terminal domain AMR71_03905 PF02397 Bacterial sugar transferase AMR71_03910 PF17836 PglD N-terminal domain AMR71_03910 PF00132 Bacterial transferase hexapeptide (six repeats) AMR71_03915 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMR71_03920 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMR71_03925 PF00528 Binding-protein-dependent transport system inner membrane component AMR71_03930 PF00528 Binding-protein-dependent transport system inner membrane component AMR71_03935 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMR71_03935 PF00005 ABC transporter AMR71_03940 PF00005 ABC transporter AMR71_03940 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMR71_03945 PF01554 MatE AMR71_03950 PF09628 YvfG protein AMR71_03955 PF00309 Sigma-54 factor, Activator interacting domain (AID) AMR71_03955 PF04963 Sigma-54 factor, core binding domain AMR71_03955 PF04552 Sigma-54, DNA binding domain AMR71_03960 PF07729 FCD domain AMR71_03960 PF00392 Bacterial regulatory proteins, gntR family AMR71_03965 PF13426 PAS domain AMR71_03965 PF02954 Bacterial regulatory protein, Fis family AMR71_03965 PF00158 Sigma-54 interaction domain AMR71_03970 PF00202 Aminotransferase class-III AMR71_03975 PF00324 Amino acid permease AMR71_03980 PF04198 Putative sugar-binding domain AMR71_03985 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMR71_03985 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AMR71_03990 PF00162 Phosphoglycerate kinase AMR71_03995 PF00121 Triosephosphate isomerase AMR71_04000 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AMR71_04000 PF01676 Metalloenzyme superfamily AMR71_04005 PF03952 Enolase, N-terminal domain AMR71_04005 PF00113 Enolase, C-terminal TIM barrel domain AMR71_04015 PF00005 ABC transporter AMR71_04035 PF00583 Acetyltransferase (GNAT) family AMR71_04045 PF01914 MarC family integral membrane protein AMR71_04050 PF12802 MarR family AMR71_04055 PF00571 CBS domain AMR71_04055 PF00005 ABC transporter AMR71_04060 PF00528 Binding-protein-dependent transport system inner membrane component AMR71_04065 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AMR71_04070 PF00528 Binding-protein-dependent transport system inner membrane component AMR71_04075 PF01638 HxlR-like helix-turn-helix AMR71_04090 PF01381 Helix-turn-helix AMR71_04095 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AMR71_04095 PF18277 AbrB C-terminal domain AMR71_04100 PF03840 Preprotein translocase SecG subunit AMR71_04105 PF12146 Serine aminopeptidase, S33 AMR71_04110 PF08206 Ribonuclease B OB domain AMR71_04110 PF00773 RNB domain AMR71_04110 PF00575 S1 RNA binding domain AMR71_04110 PF17876 Cold shock domain AMR71_04115 PF01668 SmpB protein AMR71_04135 PF00072 Response regulator receiver domain AMR71_04135 PF00990 Diguanylate cyclase, GGDEF domain AMR71_04145 PF02583 Metal-sensitive transcriptional repressor AMR71_04150 PF00403 Heavy-metal-associated domain AMR71_04155 PF00403 Heavy-metal-associated domain AMR71_04160 PF00375 Sodium:dicarboxylate symporter family AMR71_04165 PF00206 Lyase AMR71_04165 PF10415 Fumarase C C-terminus AMR71_04170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMR71_04175 PF00072 Response regulator receiver domain AMR71_04175 PF08664 YcbB domain AMR71_04180 PF00440 Bacterial regulatory proteins, tetR family AMR71_04180 PF13977 BetI-type transcriptional repressor, C-terminal AMR71_04190 PF01297 Zinc-uptake complex component A periplasmic AMR71_04195 PF00950 ABC 3 transport family AMR71_04200 PF00005 ABC transporter AMR71_04205 PF00403 Heavy-metal-associated domain AMR71_04210 PF13462 Thioredoxin AMR71_04215 PF02600 Disulfide bond formation protein DsbB AMR71_04220 PF03458 UPF0126 domain AMR71_04225 PF00999 Sodium/hydrogen exchanger family AMR71_04230 PF00480 ROK family AMR71_04235 PF00248 Aldo/keto reductase family AMR71_04240 PF00528 Binding-protein-dependent transport system inner membrane component AMR71_04250 PF00884 Sulfatase AMR71_04255 PF04307 LexA-binding, inner membrane-associated putative hydrolase AMR71_04265 PF09575 Small spore protein J (Spore_SspJ) AMR71_04270 PF13520 Amino acid permease AMR71_04275 PF01497 Periplasmic binding protein AMR71_04280 PF01032 FecCD transport family AMR71_04285 PF01032 FecCD transport family AMR71_04290 PF00005 ABC transporter AMR71_04295 PF00072 Response regulator receiver domain AMR71_04295 PF00486 Transcriptional regulatory protein, C terminal AMR71_04300 PF00512 His Kinase A (phospho-acceptor) domain AMR71_04300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMR71_04305 PF02614 Glucuronate isomerase AMR71_04310 PF00356 Bacterial regulatory proteins, lacI family AMR71_04315 PF01232 Mannitol dehydrogenase Rossmann domain AMR71_04315 PF08125 Mannitol dehydrogenase C-terminal domain AMR71_04320 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AMR71_04320 PF08666 SAF domain AMR71_04325 PF00295 Glycosyl hydrolases family 28 AMR71_04330 PF01497 Periplasmic binding protein AMR71_04335 PF01032 FecCD transport family AMR71_04340 PF00005 ABC transporter AMR71_04345 PF00701 Dihydrodipicolinate synthetase family AMR71_04350 PF00465 Iron-containing alcohol dehydrogenase AMR71_04365 PF01590 GAF domain AMR71_04365 PF00158 Sigma-54 interaction domain AMR71_04370 PF07005 Sugar-binding N-terminal domain AMR71_04370 PF17042 Nucleotide-binding C-terminal domain AMR71_04375 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AMR71_04385 PF01923 Cobalamin adenosyltransferase AMR71_04395 PF04012 PspA/IM30 family AMR71_04405 PF09922 Cell wall-active antibiotics response 4TMS YvqF AMR71_04410 PF00672 HAMP domain AMR71_04410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMR71_04410 PF07730 Histidine kinase AMR71_04415 PF00196 Bacterial regulatory proteins, luxR family AMR71_04415 PF00072 Response regulator receiver domain AMR71_04425 PF05504 Spore germination B3/ GerAC like, C-terminal AMR71_04430 PF03845 Spore germination protein AMR71_04435 PF03323 Bacillus/Clostridium GerA spore germination protein AMR71_04440 PF10415 Fumarase C C-terminus AMR71_04440 PF00206 Lyase AMR71_04445 PF00440 Bacterial regulatory proteins, tetR family AMR71_04450 PF00672 HAMP domain AMR71_04450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMR71_04450 PF00512 His Kinase A (phospho-acceptor) domain AMR71_04455 PF00486 Transcriptional regulatory protein, C terminal AMR71_04455 PF00072 Response regulator receiver domain AMR71_04460 PF13180 PDZ domain AMR71_04465 PF00106 short chain dehydrogenase AMR71_04475 PF00005 ABC transporter AMR71_04480 PF10835 Protein of unknown function (DUF2573) AMR71_04485 PF07875 Coat F domain AMR71_04495 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMR71_04495 PF00378 Enoyl-CoA hydratase/isomerase AMR71_04495 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMR71_04500 PF00108 Thiolase, N-terminal domain AMR71_04500 PF02803 Thiolase, C-terminal domain AMR71_04505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMR71_04505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMR71_04505 PF02770 Acyl-CoA dehydrogenase, middle domain AMR71_04510 PF03960 ArsC family AMR71_04515 PF01597 Glycine cleavage H-protein AMR71_04520 PF10830 Protein of unknown function (DUF2553) AMR71_04525 PF01751 Toprim domain AMR71_04530 PF00085 Thioredoxin AMR71_04535 PF02036 SCP-2 sterol transfer family AMR71_04540 PF09383 NIL domain AMR71_04540 PF00005 ABC transporter AMR71_04545 PF00528 Binding-protein-dependent transport system inner membrane component AMR71_04550 PF03180 NLPA lipoprotein AMR71_04555 PF02627 Carboxymuconolactone decarboxylase family AMR71_04560 PF00005 ABC transporter AMR71_04565 PF01458 Uncharacterized protein family (UPF0051) AMR71_04570 PF00266 Aminotransferase class-V AMR71_04575 PF01592 NifU-like N terminal domain AMR71_04580 PF01458 Uncharacterized protein family (UPF0051) AMR71_04590 PF13021 Domain of unknown function (DUF3885) AMR71_04595 PF18665 Tetracyclin repressor-like, C-terminal domain AMR71_04595 PF00440 Bacterial regulatory proteins, tetR family AMR71_04605 PF02525 Flavodoxin-like fold AMR71_04620 PF04235 Protein of unknown function (DUF418) AMR71_04625 PF00072 Response regulator receiver domain AMR71_04625 PF00486 Transcriptional regulatory protein, C terminal AMR71_04630 PF00512 His Kinase A (phospho-acceptor) domain AMR71_04635 PF06146 Phosphate-starvation-inducible E AMR71_04655 PF01497 Periplasmic binding protein AMR71_04660 PF01032 FecCD transport family AMR71_04665 PF01032 FecCD transport family AMR71_04680 PF04231 Endonuclease I AMR71_04685 PF00266 Aminotransferase class-V AMR71_04690 PF07690 Major Facilitator Superfamily AMR71_04695 PF00190 Cupin AMR71_04700 PF07905 Purine catabolism regulatory protein-like family AMR71_04700 PF13556 PucR C-terminal helix-turn-helix domain AMR71_04700 PF17853 GGDEF-like domain AMR71_04705 PF01904 Protein of unknown function DUF72 AMR71_04710 PF02872 5'-nucleotidase, C-terminal domain AMR71_04715 PF08827 Domain of unknown function (DUF1805) AMR71_04720 PF09560 Sporulation protein YunB (Spo_YunB) AMR71_04725 PF10903 Protein of unknown function (DUF2691) AMR71_04735 PF01551 Peptidase family M23 AMR71_04740 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AMR71_04740 PF04055 Radical SAM superfamily AMR71_04745 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) AMR71_04750 PF06265 Protein of unknown function (DUF1027) AMR71_04755 PF01934 Protein of unknown function DUF86 AMR71_04760 PF13344 Haloacid dehalogenase-like hydrolase AMR71_04765 PF04608 Phosphatidylglycerophosphatase A AMR71_04775 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMR71_04775 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMR71_04780 PF00742 Homoserine dehydrogenase AMR71_04780 PF01842 ACT domain AMR71_04780 PF03447 Homoserine dehydrogenase, NAD binding domain AMR71_04785 PF00291 Pyridoxal-phosphate dependent enzyme AMR71_04790 PF00288 GHMP kinases N terminal domain AMR71_04790 PF08544 GHMP kinases C terminal AMR71_04795 PF00326 Prolyl oligopeptidase family AMR71_04795 PF07676 WD40-like Beta Propeller Repeat AMR71_04800 PF01106 NifU-like domain AMR71_04805 PF07315 Protein of unknown function (DUF1462) AMR71_04815 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMR71_04820 PF07293 Protein of unknown function (DUF1450) AMR71_04825 PF01678 Diaminopimelate epimerase AMR71_04830 PF01521 Iron-sulphur cluster biosynthesis AMR71_04845 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMR71_04850 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMR71_04855 PF14068 Putative membrane protein AMR71_04860 PF06725 3D domain AMR71_04865 PF02681 Divergent PAP2 family AMR71_04870 PF00883 Cytosol aminopeptidase family, catalytic domain AMR71_04870 PF02789 Cytosol aminopeptidase family, N-terminal domain AMR71_04875 PF03553 Na+/H+ antiporter family AMR71_04875 PF13726 Na+-H+ antiporter family AMR71_04880 PF02632 BioY family AMR71_04885 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AMR71_04885 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AMR71_04890 PF17853 GGDEF-like domain AMR71_04890 PF06018 CodY GAF-like domain AMR71_04890 PF13556 PucR C-terminal helix-turn-helix domain AMR71_04895 PF06013 Proteins of 100 residues with WXG AMR71_04900 PF08817 WXG100 protein secretion system (Wss), protein YukD AMR71_04905 PF10140 WXG100 protein secretion system (Wss), protein YukC AMR71_04910 PF01580 FtsK/SpoIIIE family AMR71_04910 PF12538 DNA transporter AMR71_04920 PF17355 Family of unknown function (DUF5383) AMR71_04925 PF00106 short chain dehydrogenase AMR71_04930 PF01966 HD domain AMR71_04940 PF10842 Protein of unknown function (DUF2642) AMR71_04945 PF01594 AI-2E family transporter AMR71_04950 PF10676 Spore germination protein gerPA/gerPF AMR71_04955 PF10676 Spore germination protein gerPA/gerPF AMR71_04960 PF14166 YueH-like protein AMR71_04965 PF07997 Protein of unknown function (DUF1694) AMR71_04970 PF00857 Isochorismatase family AMR71_04975 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain AMR71_04975 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AMR71_04975 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AMR71_04980 PF00563 EAL domain AMR71_04980 PF08668 HDOD domain AMR71_04990 PF08181 DegQ (SacQ) family AMR71_04995 PF00348 Polyprenyl synthetase AMR71_05005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMR71_05005 PF07730 Histidine kinase AMR71_05010 PF00072 Response regulator receiver domain AMR71_05010 PF00196 Bacterial regulatory proteins, luxR family AMR71_05015 PF03061 Thioesterase superfamily AMR71_05020 PF03334 Na+/H+ antiporter subunit AMR71_05025 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AMR71_05030 PF01899 Na+/H+ ion antiporter subunit AMR71_05035 PF00361 Proton-conducting membrane transporter AMR71_05040 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AMR71_05045 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AMR71_05050 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AMR71_05050 PF00361 Proton-conducting membrane transporter AMR71_05050 PF13244 Domain of unknown function (DUF4040) AMR71_05060 PF03390 2-hydroxycarboxylate transporter family AMR71_05085 PF00072 Response regulator receiver domain AMR71_05090 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AMR71_05090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMR71_05090 PF17203 Single cache domain 3 AMR71_05090 PF00989 PAS fold AMR71_05095 PF17328 Family of unknown function (DUF5366) AMR71_05100 PF04134 Protein of unknown function, DUF393 AMR71_05105 PF00912 Transglycosylase AMR71_05105 PF00905 Penicillin binding protein transpeptidase domain AMR71_05110 PF07690 Major Facilitator Superfamily AMR71_05115 PF00929 Exonuclease AMR71_05120 PF08810 Kinase associated protein B AMR71_05125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMR71_05125 PF00512 His Kinase A (phospho-acceptor) domain AMR71_05130 PF00155 Aminotransferase class I and II AMR71_05135 PF08958 Domain of unknown function (DUF1871) AMR71_05140 PF08386 TAP-like protein AMR71_05140 PF00561 alpha/beta hydrolase fold AMR71_05145 PF01037 Lrp/AsnC ligand binding domain AMR71_05150 PF00155 Aminotransferase class I and II AMR71_05155 PF00575 S1 RNA binding domain AMR71_05160 PF04070 Domain of unknown function (DUF378) AMR71_05165 PF00465 Iron-containing alcohol dehydrogenase AMR71_05170 PF00465 Iron-containing alcohol dehydrogenase AMR71_05175 PF00342 Phosphoglucose isomerase AMR71_05185 PF08868 YugN-like family AMR71_05190 PF02254 TrkA-N domain AMR71_05190 PF07885 Ion channel AMR71_05200 PF04298 Putative neutral zinc metallopeptidase AMR71_05205 PF03471 Transporter associated domain AMR71_05205 PF00571 CBS domain AMR71_05205 PF01595 Cyclin M transmembrane N-terminal domain AMR71_05210 PF01894 Uncharacterised protein family UPF0047 AMR71_05215 PF03060 Nitronate monooxygenase AMR71_05230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMR71_05230 PF00672 HAMP domain AMR71_05230 PF02743 Cache domain AMR71_05235 PF02743 Cache domain AMR71_05235 PF00672 HAMP domain AMR71_05235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMR71_05240 PF00672 HAMP domain AMR71_05240 PF02743 Cache domain AMR71_05240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMR71_05245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMR71_05245 PF02743 Cache domain AMR71_05245 PF00672 HAMP domain AMR71_05250 PF01965 DJ-1/PfpI family AMR71_05255 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMR71_05255 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMR71_05265 PF01594 AI-2E family transporter AMR71_05270 PF02673 Bacitracin resistance protein BacA AMR71_05280 PF04055 Radical SAM superfamily AMR71_05280 PF06968 Biotin and Thiamin Synthesis associated domain AMR71_05290 PF01381 Helix-turn-helix AMR71_05305 PF05866 Endodeoxyribonuclease RusA AMR71_05310 PF17356 Phage-like element PBSX protein XtrA AMR71_05315 PF08281 Sigma-70, region 4 AMR71_05320 PF10668 Phage terminase small subunit AMR71_05325 PF17288 Terminase RNAseH like domain AMR71_05325 PF04466 Phage terminase large subunit AMR71_05330 PF04860 Phage portal protein AMR71_05335 PF14550 Putative phage serine protease XkdF AMR71_05340 PF05065 Phage capsid family AMR71_05345 PF11436 Protein of unknown function (DUF3199) AMR71_05350 PF12206 Domain of unknown function (DUF3599) AMR71_05355 PF04883 Bacteriophage HK97-gp10, putative tail-component AMR71_05370 PF04984 Phage tail sheath protein subtilisin-like domain AMR71_05370 PF17482 Phage tail sheath C-terminal domain AMR71_05370 PF17481 Phage tail sheath protein beta-sandwich domain AMR71_05375 PF09393 Phage tail tube protein AMR71_05380 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC AMR71_05385 PF01464 Transglycosylase SLT domain AMR71_05385 PF01464 Transglycosylase SLT domain AMR71_05390 PF01476 LysM domain AMR71_05400 PF10844 Protein of unknown function (DUF2577) AMR71_05405 PF10934 Protein of unknown function (DUF2634) AMR71_05410 PF04865 Baseplate J-like protein AMR71_05415 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) AMR71_05430 PF09636 XkdW protein AMR71_05435 PF09693 Phage uncharacterised protein (Phage_XkdX) AMR71_05460 PF10960 BhlA holin family AMR71_05465 PF04688 SPP1 phage holin AMR71_05470 PF01471 Putative peptidoglycan binding domain AMR71_05470 PF01510 N-acetylmuramoyl-L-alanine amidase AMR71_05495 PF00465 Iron-containing alcohol dehydrogenase AMR71_05500 PF12867 DinB superfamily AMR71_05510 PF01145 SPFH domain / Band 7 family AMR71_05510 PF15975 Flotillin AMR71_05515 PF01098 Cell cycle protein AMR71_05520 PF01098 Cell cycle protein AMR71_05525 PF06803 Protein of unknown function (DUF1232) AMR71_05530 PF00583 Acetyltransferase (GNAT) family AMR71_05535 PF09515 Thiamine transporter protein (Thia_YuaJ) AMR71_05670 PF03073 TspO/MBR family AMR71_05675 PF01258 Prokaryotic dksA/traR C4-type zinc finger AMR71_05680 PF01040 UbiA prenyltransferase family AMR71_05685 PF00425 chorismate binding enzyme AMR71_05690 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMR71_05690 PF16582 Middle domain of thiamine pyrophosphate AMR71_05690 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMR71_05695 PF00561 alpha/beta hydrolase fold AMR71_05700 PF00378 Enoyl-CoA hydratase/isomerase AMR71_05705 PF13193 AMP-binding enzyme C-terminal domain AMR71_05705 PF00501 AMP-binding enzyme AMR71_05710 PF13378 Enolase C-terminal domain-like AMR71_05710 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMR71_05720 PF02322 Cytochrome bd terminal oxidase subunit II AMR71_05725 PF01654 Cytochrome bd terminal oxidase subunit I AMR71_05730 PF01197 Ribosomal protein L31 AMR71_05735 PF01297 Zinc-uptake complex component A periplasmic AMR71_05735 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment AMR71_05740 PF00484 Carbonic anhydrase AMR71_05745 PF01809 Putative membrane protein insertion efficiency factor AMR71_05750 PF02664 S-Ribosylhomocysteinase (LuxS) AMR71_05755 PF13115 YtkA-like AMR71_05765 PF00210 Ferritin-like domain AMR71_05775 PF05105 Bacteriophage holin family AMR71_05790 PF02342 TerD domain AMR71_05795 PF00293 NUDIX domain AMR71_05800 PF00528 Binding-protein-dependent transport system inner membrane component AMR71_05805 PF00005 ABC transporter AMR71_05825 PF00535 Glycosyl transferase family 2 AMR71_05830 PF01593 Flavin containing amine oxidoreductase AMR71_05835 PF00326 Prolyl oligopeptidase family AMR71_05840 PF10763 Protein of unknown function (DUF2584) AMR71_05845 PF01293 Phosphoenolpyruvate carboxykinase AMR71_05850 PF02772 S-adenosylmethionine synthetase, central domain AMR71_05850 PF02773 S-adenosylmethionine synthetase, C-terminal domain AMR71_05850 PF00438 S-adenosylmethionine synthetase, N-terminal domain AMR71_05855 PF13537 Glutamine amidotransferase domain AMR71_05855 PF00733 Asparagine synthase AMR71_05860 PF00132 Bacterial transferase hexapeptide (six repeats) AMR71_05865 PF12146 Serine aminopeptidase, S33 AMR71_05870 PF10776 Protein of unknown function (DUF2600) AMR71_05875 PF07070 SpoOM protein AMR71_05880 PF06962 Putative rRNA methylase AMR71_05885 PF16199 Radical_SAM C-terminal domain AMR71_05885 PF04055 Radical SAM superfamily AMR71_05890 PF10732 Protein of unknown function (DUF2524) AMR71_05905 PF00392 Bacterial regulatory proteins, gntR family AMR71_05910 PF00005 ABC transporter AMR71_05920 PF00005 ABC transporter AMR71_05925 PF02687 FtsX-like permease family AMR71_05925 PF12704 MacB-like periplasmic core domain AMR71_05930 PF04791 LMBR1-like membrane protein AMR71_05935 PF01740 STAS domain AMR71_05935 PF13426 PAS domain AMR71_05940 PF14074 Protein of unknown function (DUF4257) AMR71_05945 PF08264 Anticodon-binding domain of tRNA AMR71_05945 PF13603 Leucyl-tRNA synthetase, Domain 2 AMR71_05945 PF09334 tRNA synthetases class I (M) AMR71_05945 PF00133 tRNA synthetases class I (I, L, M and V) AMR71_05950 PF01738 Dienelactone hydrolase family AMR71_05955 PF01370 NAD dependent epimerase/dehydratase family AMR71_05960 PF00528 Binding-protein-dependent transport system inner membrane component AMR71_05965 PF13416 Bacterial extracellular solute-binding protein AMR71_05970 PF00248 Aldo/keto reductase family AMR71_05975 PF07690 Major Facilitator Superfamily AMR71_05980 PF01638 HxlR-like helix-turn-helix AMR71_05985 PF17853 GGDEF-like domain AMR71_05985 PF12833 Helix-turn-helix domain AMR71_05990 PF00528 Binding-protein-dependent transport system inner membrane component AMR71_05995 PF07470 Glycosyl Hydrolase Family 88 AMR71_06005 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMR71_06005 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMR71_06010 PF04854 Protein of unknown function, DUF624 AMR71_06015 PF00581 Rhodanese-like domain AMR71_06020 PF10957 Sporulation protein Cse60 AMR71_06025 PF03691 Uncharacterised protein family (UPF0167) AMR71_06030 PF02028 BCCT, betaine/carnitine/choline family transporter AMR71_06045 PF01943 Polysaccharide biosynthesis protein AMR71_06045 PF14667 Polysaccharide biosynthesis C-terminal domain AMR71_06050 PF01479 S4 domain AMR71_06050 PF00849 RNA pseudouridylate synthase AMR71_06055 PF08220 DeoR-like helix-turn-helix domain AMR71_06060 PF00860 Permease family AMR71_06065 PF01546 Peptidase family M20/M25/M40 AMR71_06070 PF03575 Peptidase family S51 AMR71_06075 PF00291 Pyridoxal-phosphate dependent enzyme AMR71_06090 PF00781 Diacylglycerol kinase catalytic domain AMR71_06095 PF01636 Phosphotransferase enzyme family AMR71_06100 PF14165 YtzH-like protein AMR71_06105 PF02390 Putative methyltransferase AMR71_06110 PF00753 Metallo-beta-lactamase superfamily AMR71_06115 PF03949 Malic enzyme, NAD binding domain AMR71_06115 PF00390 Malic enzyme, N-terminal domain AMR71_06120 PF03413 Peptidase propeptide and YPEB domain AMR71_06125 PF05343 M42 glutamyl aminopeptidase AMR71_06130 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ AMR71_06140 PF00085 Thioredoxin AMR71_06145 PF07285 Protein of unknown function (DUF1444) AMR71_06150 PF14794 Domain of unknown function (DUF4479) AMR71_06150 PF01588 Putative tRNA binding domain AMR71_06155 PF17854 FtsK alpha domain AMR71_06155 PF01580 FtsK/SpoIIIE family AMR71_06155 PF09397 Ftsk gamma domain AMR71_06160 PF08245 Mur ligase middle domain AMR71_06160 PF02875 Mur ligase family, glutamate ligase domain AMR71_06160 PF01225 Mur ligase family, catalytic domain AMR71_06165 PF06103 Bacterial protein of unknown function (DUF948) AMR71_06170 PF12732 YtxH-like protein AMR71_06175 PF11009 Protein of unknown function (DUF2847) AMR71_06180 PF00793 DAHP synthetase I family AMR71_06180 PF01817 Chorismate mutase type II AMR71_06185 PF00356 Bacterial regulatory proteins, lacI family AMR71_06190 PF00850 Histone deacetylase domain AMR71_06195 PF00571 CBS domain AMR71_06200 PF00583 Acetyltransferase (GNAT) family AMR71_06205 PF00501 AMP-binding enzyme AMR71_06205 PF13193 AMP-binding enzyme C-terminal domain AMR71_06210 PF00579 tRNA synthetases class I (W and Y) AMR71_06210 PF01479 S4 domain AMR71_06215 PF03992 Antibiotic biosynthesis monooxygenase AMR71_06220 PF01674 Lipase (class 2) AMR71_06230 PF00857 Isochorismatase family AMR71_06240 PF01479 S4 domain AMR71_06240 PF00163 Ribosomal protein S4/S9 N-terminal domain AMR71_06245 PF13185 GAF domain AMR71_06250 PF00440 Bacterial regulatory proteins, tetR family AMR71_06255 PF02811 PHP domain AMR71_06260 PF06160 Septation ring formation regulator, EzrA AMR71_06265 PF05525 Branched-chain amino acid transport protein AMR71_06270 PF05525 Branched-chain amino acid transport protein AMR71_06275 PF00266 Aminotransferase class-V AMR71_06280 PF02568 Thiamine biosynthesis protein (ThiI) AMR71_06280 PF02926 THUMP domain AMR71_06285 PF00269 Small, acid-soluble spore proteins, alpha/beta type AMR71_06290 PF13193 AMP-binding enzyme C-terminal domain AMR71_06290 PF00501 AMP-binding enzyme AMR71_06295 PF01810 LysE type translocator AMR71_06310 PF02525 Flavodoxin-like fold AMR71_06315 PF01979 Amidohydrolase family AMR71_06320 PF02687 FtsX-like permease family AMR71_06325 PF00005 ABC transporter AMR71_06330 PF03551 Transcriptional regulator PadR-like family AMR71_06335 PF01098 Cell cycle protein AMR71_06340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMR71_06345 PF00072 Response regulator receiver domain AMR71_06345 PF00486 Transcriptional regulatory protein, C terminal AMR71_06350 PF01497 Periplasmic binding protein AMR71_06355 PF00072 Response regulator receiver domain AMR71_06355 PF00196 Bacterial regulatory proteins, luxR family AMR71_06360 PF07730 Histidine kinase AMR71_06365 PF00487 Fatty acid desaturase AMR71_06370 PF00271 Helicase conserved C-terminal domain AMR71_06370 PF00270 DEAD/DEAH box helicase AMR71_06370 PF03880 DbpA RNA binding domain AMR71_06375 PF01513 ATP-NAD kinase AMR71_06380 PF01343 Peptidase family S49 AMR71_06385 PF06271 RDD family AMR71_06390 PF11167 Protein of unknown function (DUF2953) AMR71_06395 PF09579 Sporulation protein YtfJ (Spore_YtfJ) AMR71_06400 PF08534 Redoxin AMR71_06405 PF02384 N-6 DNA Methylase AMR71_06410 PF00871 Acetokinase family AMR71_06415 PF00994 Probable molybdopterin binding domain AMR71_06420 PF00764 Arginosuccinate synthase AMR71_06425 PF00206 Lyase AMR71_06425 PF14698 Argininosuccinate lyase C-terminal AMR71_06445 PF07085 DRTGG domain AMR71_06445 PF03061 Thioesterase superfamily AMR71_06445 PF00571 CBS domain AMR71_06445 PF00392 Bacterial regulatory proteins, gntR family AMR71_06450 PF14007 YtpI-like protein AMR71_06455 PF01368 DHH family AMR71_06455 PF02272 DHHA1 domain AMR71_06470 PF14034 Sporulation protein YtrH AMR71_06475 PF07733 Bacterial DNA polymerase III alpha NTPase domain AMR71_06475 PF01336 OB-fold nucleic acid binding domain AMR71_06475 PF02811 PHP domain AMR71_06475 PF14579 Helix-hairpin-helix motif AMR71_06475 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AMR71_06480 PF03949 Malic enzyme, NAD binding domain AMR71_06480 PF00390 Malic enzyme, N-terminal domain AMR71_06485 PF17848 Acetyl-coA carboxylase zinc finger domain AMR71_06485 PF01039 Carboxyl transferase domain AMR71_06490 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AMR71_06495 PF00365 Phosphofructokinase AMR71_06500 PF00224 Pyruvate kinase, barrel domain AMR71_06500 PF00391 PEP-utilising enzyme, mobile domain AMR71_06500 PF02887 Pyruvate kinase, alpha/beta domain AMR71_06505 PF04186 FxsA cytoplasmic membrane protein AMR71_06510 PF01594 AI-2E family transporter AMR71_06515 PF04284 Protein of unknown function (DUF441) AMR71_06520 PF00285 Citrate synthase, C-terminal domain AMR71_06525 PF00180 Isocitrate/isopropylmalate dehydrogenase AMR71_06530 PF00056 lactate/malate dehydrogenase, NAD binding domain AMR71_06530 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AMR71_06535 PF00486 Transcriptional regulatory protein, C terminal AMR71_06535 PF00072 Response regulator receiver domain AMR71_06540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMR71_06540 PF16736 Single Cache-like AMR71_06540 PF00512 His Kinase A (phospho-acceptor) domain AMR71_06540 PF00989 PAS fold AMR71_06545 PF00476 DNA polymerase family A AMR71_06545 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AMR71_06545 PF01367 5'-3' exonuclease, C-terminal SAM fold AMR71_06550 PF06827 Zinc finger found in FPG and IleRS AMR71_06550 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AMR71_06550 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AMR71_06555 PF02659 Putative manganese efflux pump AMR71_06560 PF01121 Dephospho-CoA kinase AMR71_06565 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AMR71_06565 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMR71_06570 PF02675 S-adenosylmethionine decarboxylase AMR71_06580 PF03477 ATP cone domain AMR71_06585 PF07261 Replication initiation and membrane attachment AMR71_06590 PF01695 IstB-like ATP binding protein AMR71_06590 PF07319 Primosomal protein DnaI N-terminus AMR71_06595 PF09335 SNARE associated Golgi protein AMR71_06600 PF08812 YtxC-like family AMR71_06605 PF03129 Anticodon binding domain AMR71_06605 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMR71_06605 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMR71_06605 PF02824 TGS domain AMR71_06610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMR71_06610 PF08447 PAS fold AMR71_06610 PF13426 PAS domain AMR71_06625 PF00707 Translation initiation factor IF-3, C-terminal domain AMR71_06625 PF05198 Translation initiation factor IF-3, N-terminal domain AMR71_06630 PF01632 Ribosomal protein L35 AMR71_06635 PF00453 Ribosomal protein L20 AMR71_06640 PF06961 Protein of unknown function (DUF1294) AMR71_06650 PF05343 M42 glutamyl aminopeptidase AMR71_06655 PF13722 5TM C-terminal transporter carbon starvation CstA AMR71_06655 PF02554 Carbon starvation protein CstA AMR71_06660 PF14098 Small, acid-soluble spore protein I AMR71_06665 PF08032 RNA 2'-O ribose methyltransferase substrate binding AMR71_06665 PF00588 SpoU rRNA Methylase family AMR71_06670 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AMR71_06670 PF01409 tRNA synthetases class II core domain (F) AMR71_06675 PF03484 tRNA synthetase B5 domain AMR71_06675 PF01588 Putative tRNA binding domain AMR71_06675 PF03483 B3/4 domain AMR71_06675 PF03147 Ferredoxin-fold anticodon binding domain AMR71_06675 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AMR71_06680 PF01351 Ribonuclease HII AMR71_06680 PF11858 Domain of unknown function (DUF3378) AMR71_06685 PF05164 Cell division protein ZapA AMR71_06690 PF02674 Colicin V production protein AMR71_06695 PF02811 PHP domain AMR71_06695 PF14791 DNA polymerase beta thumb AMR71_06695 PF14716 Helix-hairpin-helix domain AMR71_06700 PF00488 MutS domain V AMR71_06700 PF01713 Smr domain AMR71_06705 PF03994 Domain of Unknown Function (DUF350) AMR71_06715 PF00501 AMP-binding enzyme AMR71_06715 PF13193 AMP-binding enzyme C-terminal domain AMR71_06720 PF08359 YsiA-like protein, C-terminal region AMR71_06720 PF00440 Bacterial regulatory proteins, tetR family AMR71_06725 PF00378 Enoyl-CoA hydratase/isomerase AMR71_06730 PF01012 Electron transfer flavoprotein domain AMR71_06735 PF00766 Electron transfer flavoprotein FAD-binding domain AMR71_06735 PF01012 Electron transfer flavoprotein domain AMR71_06740 PF06964 Alpha-L-arabinofuranosidase C-terminal domain AMR71_06745 PF00085 Thioredoxin AMR71_06750 PF02151 UvrB/uvrC motif AMR71_06750 PF01541 GIY-YIG catalytic domain AMR71_06750 PF08459 UvrC Helix-hairpin-helix N-terminal AMR71_06755 PF00696 Amino acid kinase family AMR71_06755 PF01842 ACT domain AMR71_06755 PF13840 ACT domain AMR71_06760 PF10702 Protein of unknown function (DUF2507) AMR71_06765 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AMR71_06770 PF02910 Fumarate reductase flavoprotein C-term AMR71_06770 PF00890 FAD binding domain AMR71_06775 PF13085 2Fe-2S iron-sulfur cluster binding domain AMR71_06775 PF13183 4Fe-4S dicluster domain AMR71_06780 PF03061 Thioesterase superfamily AMR71_06785 PF02237 Biotin protein ligase C terminal domain AMR71_06785 PF03099 Biotin/lipoate A/B protein ligase family AMR71_06790 PF04303 PrpF protein AMR71_06795 PF03466 LysR substrate binding domain AMR71_06795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMR71_06800 PF03600 Citrate transporter AMR71_06805 PF00196 Bacterial regulatory proteins, luxR family AMR71_06810 PF01047 MarR family AMR71_06815 PF01177 Asp/Glu/Hydantoin racemase AMR71_06820 PF10646 Sporulation and spore germination AMR71_06825 PF03725 3' exoribonuclease family, domain 2 AMR71_06825 PF01138 3' exoribonuclease family, domain 1 AMR71_06830 PF01725 Ham1 family AMR71_06835 PF12850 Calcineurin-like phosphoesterase superfamily domain AMR71_06870 PF12459 D-Ala-teichoic acid biosynthesis protein AMR71_06875 PF00501 AMP-binding enzyme AMR71_06875 PF13193 AMP-binding enzyme C-terminal domain AMR71_06880 PF03062 MBOAT, membrane-bound O-acyltransferase family AMR71_06885 PF00550 Phosphopantetheine attachment site AMR71_06890 PF04914 DltD protein AMR71_06895 PF06803 Protein of unknown function (DUF1232) AMR71_06900 PF10282 Lactonase, 7-bladed beta-propeller AMR71_06905 PF01063 Amino-transferase class IV AMR71_06910 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMR71_06910 PF00205 Thiamine pyrophosphate enzyme, central domain AMR71_06910 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMR71_06915 PF01842 ACT domain AMR71_06915 PF10369 Small subunit of acetolactate synthase AMR71_06920 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AMR71_06920 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AMR71_06925 PF00682 HMGL-like AMR71_06925 PF08502 LeuA allosteric (dimerisation) domain AMR71_06930 PF00180 Isocitrate/isopropylmalate dehydrogenase AMR71_06935 PF00330 Aconitase family (aconitate hydratase) AMR71_06940 PF00694 Aconitase C-terminal domain AMR71_06950 PF05697 Bacterial trigger factor protein (TF) AMR71_06950 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMR71_06950 PF05698 Bacterial trigger factor protein (TF) C-terminus AMR71_06955 PF10431 C-terminal, D2-small domain, of ClpB protein AMR71_06955 PF06689 ClpX C4-type zinc finger AMR71_06955 PF07724 AAA domain (Cdc48 subfamily) AMR71_06960 PF05362 Lon protease (S16) C-terminal proteolytic domain AMR71_06960 PF00004 ATPase family associated with various cellular activities (AAA) AMR71_06965 PF02190 ATP-dependent protease La (LON) substrate-binding domain AMR71_06965 PF00004 ATPase family associated with various cellular activities (AAA) AMR71_06965 PF05362 Lon protease (S16) C-terminal proteolytic domain AMR71_06970 PF01926 50S ribosome-binding GTPase AMR71_06990 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AMR71_06990 PF01488 Shikimate / quinate 5-dehydrogenase AMR71_06990 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AMR71_06995 PF01578 Cytochrome C assembly protein AMR71_07000 PF03900 Porphobilinogen deaminase, C-terminal domain AMR71_07000 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AMR71_07005 PF02602 Uroporphyrinogen-III synthase HemD AMR71_07010 PF00490 Delta-aminolevulinic acid dehydratase AMR71_07015 PF00202 Aminotransferase class-III AMR71_07020 PF01476 LysM domain AMR71_07035 PF10458 Valyl tRNA synthetase tRNA binding arm AMR71_07035 PF08264 Anticodon-binding domain of tRNA AMR71_07035 PF00133 tRNA synthetases class I (I, L, M and V) AMR71_07040 PF08245 Mur ligase middle domain AMR71_07040 PF02875 Mur ligase family, glutamate ligase domain AMR71_07045 PF01478 Type IV leader peptidase family AMR71_07045 PF06750 Bacterial Peptidase A24 N-terminal domain AMR71_07055 PF02545 Maf-like protein AMR71_07060 PF04002 RadC-like JAB domain AMR71_07070 PF04085 rod shape-determining protein MreC AMR71_07075 PF04093 rod shape-determining protein MreD AMR71_07080 PF03775 Septum formation inhibitor MinC, C-terminal domain AMR71_07085 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMR71_07090 PF01551 Peptidase family M23 AMR71_07095 PF02163 Peptidase family M50 AMR71_07100 PF00829 Ribosomal prokaryotic L21 protein AMR71_07105 PF04327 Cysteine protease Prp AMR71_07110 PF01016 Ribosomal L27 protein AMR71_07115 PF14682 Sporulation initiation phospho-transferase B, C-terminal AMR71_07115 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AMR71_07120 PF01926 50S ribosome-binding GTPase AMR71_07120 PF01018 GTP1/OBG AMR71_07120 PF09269 Domain of unknown function (DUF1967) AMR71_07125 PF01842 ACT domain AMR71_07130 PF01842 ACT domain AMR71_07130 PF00800 Prephenate dehydratase AMR71_07135 PF08279 HTH domain AMR71_07135 PF02829 3H domain AMR71_07140 PF00266 Aminotransferase class-V AMR71_07145 PF02910 Fumarate reductase flavoprotein C-term AMR71_07145 PF00890 FAD binding domain AMR71_07150 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AMR71_07150 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AMR71_07155 PF02445 Quinolinate synthetase A protein AMR71_07160 PF01476 LysM domain AMR71_07165 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) AMR71_07175 PF13667 ThiC-associated domain AMR71_07175 PF01964 Radical SAM ThiC family AMR71_07190 PF08955 BofC C-terminal domain AMR71_07190 PF08977 Bypass of Forespore C, N terminal AMR71_07195 PF01330 RuvA N terminal domain AMR71_07195 PF07499 RuvA, C-terminal domain AMR71_07200 PF05491 RuvB C-terminal winged helix domain AMR71_07200 PF17864 RuvB AAA lid domain AMR71_07200 PF05496 Holliday junction DNA helicase RuvB P-loop domain AMR71_07205 PF11146 Protein of unknown function (DUF2905) AMR71_07210 PF02547 Queuosine biosynthesis protein AMR71_07215 PF01702 Queuine tRNA-ribosyltransferase AMR71_07220 PF02699 Preprotein translocase subunit AMR71_07225 PF12670 Protein of unknown function (DUF3792) AMR71_07230 PF04239 Protein of unknown function (DUF421) AMR71_07235 PF14667 Polysaccharide biosynthesis C-terminal domain AMR71_07235 PF01943 Polysaccharide biosynthesis protein AMR71_07240 PF13797 Post-transcriptional regulator AMR71_07245 PF02355 Protein export membrane protein AMR71_07245 PF07549 SecD/SecF GG Motif AMR71_07250 PF02080 TrkA-C domain AMR71_07255 PF06305 Lipopolysaccharide assembly protein A domain AMR71_07260 PF17768 RecJ OB domain AMR71_07260 PF02272 DHHA1 domain AMR71_07260 PF01368 DHH family AMR71_07260 PF10141 Single-strand DNA-specific exonuclease, C terminal domain AMR71_07265 PF00156 Phosphoribosyl transferase domain AMR71_07270 PF02824 TGS domain AMR71_07270 PF13291 ACT domain AMR71_07270 PF04607 Region found in RelA / SpoT proteins AMR71_07275 PF02580 D-Tyr-tRNA(Tyr) deacylase AMR71_07280 PF08239 Bacterial SH3 domain AMR71_07280 PF01520 N-acetylmuramoyl-L-alanine amidase AMR71_07285 PF03129 Anticodon binding domain AMR71_07285 PF13393 Histidyl-tRNA synthetase AMR71_07290 PF02938 GAD domain AMR71_07290 PF01336 OB-fold nucleic acid binding domain AMR71_07290 PF00152 tRNA synthetases class II (D, K and N) AMR71_07295 PF00899 ThiF family AMR71_07300 PF16193 AAA C-terminal domain AMR71_07300 PF12002 MgsA AAA+ ATPase C terminal AMR71_07300 PF05496 Holliday junction DNA helicase RuvB P-loop domain AMR71_07305 PF02082 Transcriptional regulator AMR71_07310 PF00266 Aminotransferase class-V AMR71_07320 PF13181 Tetratricopeptide repeat AMR71_07320 PF07719 Tetratricopeptide repeat AMR71_07325 PF13538 UvrD-like helicase C-terminal domain AMR71_07325 PF14490 Helix-hairpin-helix containing domain AMR71_07325 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain AMR71_07330 PF05239 PRC-barrel domain AMR71_07340 PF00528 Binding-protein-dependent transport system inner membrane component AMR71_07345 PF00528 Binding-protein-dependent transport system inner membrane component AMR71_07350 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMR71_07355 PF00005 ABC transporter AMR71_07360 PF01594 AI-2E family transporter AMR71_07365 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMR71_07365 PF02272 DHHA1 domain AMR71_07365 PF01411 tRNA synthetases class II (A) AMR71_07370 PF06135 IreB regulatory phosphoprotein AMR71_07375 PF03652 Holliday junction resolvase AMR71_07380 PF06949 Protein of unknown function (DUF1292) AMR71_07390 PF02632 BioY family AMR71_07395 PF00501 AMP-binding enzyme AMR71_07395 PF13193 AMP-binding enzyme C-terminal domain AMR71_07400 PF00108 Thiolase, N-terminal domain AMR71_07400 PF02803 Thiolase, C-terminal domain AMR71_07405 PF02618 YceG-like family AMR71_07425 PF00485 Phosphoribulokinase / Uridine kinase family AMR71_07430 PF01272 Transcription elongation factor, GreA/GreB, C-term AMR71_07430 PF03449 Transcription elongation factor, N-terminal AMR71_07435 PF03717 Penicillin-binding Protein dimerisation domain AMR71_07435 PF00905 Penicillin binding protein transpeptidase domain AMR71_07440 PF07423 Domain of unknown function (DUF1510) AMR71_07445 PF10750 Protein of unknown function (DUF2536) AMR71_07450 PF13649 Methyltransferase domain AMR71_07455 PF01048 Phosphorylase superfamily AMR71_07460 PF00291 Pyridoxal-phosphate dependent enzyme AMR71_07465 PF01053 Cys/Met metabolism PLP-dependent enzyme AMR71_07470 PF14143 YrhC-like protein AMR71_07475 PF08241 Methyltransferase domain AMR71_07480 PF08240 Alcohol dehydrogenase GroES-like domain AMR71_07480 PF00107 Zinc-binding dehydrogenase AMR71_07485 PF03466 LysR substrate binding domain AMR71_07485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMR71_07490 PF01235 Sodium:alanine symporter family AMR71_07495 PF00465 Iron-containing alcohol dehydrogenase AMR71_07510 PF08240 Alcohol dehydrogenase GroES-like domain AMR71_07510 PF00107 Zinc-binding dehydrogenase AMR71_07515 PF00528 Binding-protein-dependent transport system inner membrane component AMR71_07520 PF00528 Binding-protein-dependent transport system inner membrane component AMR71_07525 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMR71_07530 PF00005 ABC transporter AMR71_07535 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AMR71_07535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMR71_07535 PF02770 Acyl-CoA dehydrogenase, middle domain AMR71_07540 PF00905 Penicillin binding protein transpeptidase domain AMR71_07545 PF05593 RHS Repeat AMR71_07555 PF14176 YxiJ-like protein AMR71_07565 PF00135 Carboxylesterase family AMR71_07570 PF01638 HxlR-like helix-turn-helix AMR71_07575 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AMR71_07580 PF01380 SIS domain AMR71_07590 PF01047 MarR family AMR71_07600 PF00392 Bacterial regulatory proteins, gntR family AMR71_07610 PF00596 Class II Aldolase and Adducin N-terminal domain AMR71_07615 PF11762 L-arabinose isomerase C-terminal domain AMR71_07615 PF02610 L-arabinose isomerase AMR71_07620 PF00083 Sugar (and other) transporter AMR71_07640 PF00005 ABC transporter AMR71_07675 PF11738 Protein of unknown function (DUF3298) AMR71_07675 PF01522 Polysaccharide deacetylase AMR71_07675 PF13739 Deacetylase PdaC AMR71_07700 PF04542 Sigma-70 region 2 AMR71_07700 PF04545 Sigma-70, region 4 AMR71_07705 PF18801 response regulator aspartate phosphatase H, N terminal AMR71_07710 PF01522 Polysaccharide deacetylase AMR71_07715 PF00657 GDSL-like Lipase/Acylhydrolase AMR71_07720 PF08970 Sporulation inhibitor A AMR71_07730 PF01926 50S ribosome-binding GTPase AMR71_07735 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AMR71_07735 PF01488 Shikimate / quinate 5-dehydrogenase AMR71_07735 PF08501 Shikimate dehydrogenase substrate binding domain AMR71_07740 PF01985 CRS1 / YhbY (CRM) domain AMR71_07745 PF01467 Cytidylyltransferase-like AMR71_07750 PF01966 HD domain AMR71_07760 PF13649 Methyltransferase domain AMR71_07765 PF14748 Pyrroline-5-carboxylate reductase dimerisation AMR71_07765 PF03807 NADP oxidoreductase coenzyme F420-dependent AMR71_07770 PF10531 SLBB domain AMR71_07775 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMR71_07780 PF00753 Metallo-beta-lactamase superfamily AMR71_07780 PF13567 Domain of unknown function (DUF4131) AMR71_07780 PF03772 Competence protein AMR71_07785 PF06144 DNA polymerase III, delta subunit AMR71_07790 PF01649 Ribosomal protein S20 AMR71_07795 PF03418 Germination protease AMR71_07800 PF07454 Stage II sporulation protein P (SpoIIP) AMR71_07805 PF12438 Protein of unknown function (DUF3679) AMR71_07810 PF03144 Elongation factor Tu domain 2 AMR71_07810 PF00009 Elongation factor Tu GTP binding domain AMR71_07810 PF00679 Elongation factor G C-terminus AMR71_07810 PF06421 GTP-binding protein LepA C-terminus AMR71_07815 PF06969 HemN C-terminal domain AMR71_07815 PF04055 Radical SAM superfamily AMR71_07820 PF01628 HrcA protein C terminal domain AMR71_07825 PF01025 GrpE AMR71_07830 PF00012 Hsp70 protein AMR71_07835 PF00226 DnaJ domain AMR71_07835 PF01556 DnaJ C terminal domain AMR71_07835 PF00684 DnaJ central domain AMR71_07845 PF04452 RNA methyltransferase AMR71_07850 PF00919 Uncharacterized protein family UPF0004 AMR71_07850 PF01938 TRAM domain AMR71_07850 PF04055 Radical SAM superfamily AMR71_07855 PF02690 Na+/Pi-cotransporter AMR71_07860 PF01165 Ribosomal protein S21 AMR71_07865 PF09424 Yqey-like protein AMR71_07870 PF01972 Serine dehydrogenase proteinase AMR71_07870 PF01957 NfeD-like C-terminal, partner-binding AMR71_07875 PF12127 SigmaW regulon antibacterial AMR71_07885 PF07873 YabP family AMR71_07890 PF06898 Putative stage IV sporulation protein YqfD AMR71_07895 PF02562 PhoH-like protein AMR71_07900 PF07698 7TM receptor with intracellular HD hydrolase AMR71_07900 PF07697 7TM-HD extracellular AMR71_07900 PF01966 HD domain AMR71_07905 PF02130 Uncharacterized protein family UPF0054 AMR71_07910 PF01219 Prokaryotic diacylglycerol kinase AMR71_07915 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMR71_07920 PF01926 50S ribosome-binding GTPase AMR71_07920 PF07650 KH domain AMR71_07925 PF11967 Recombination protein O N terminal AMR71_07925 PF02565 Recombination protein O C terminal AMR71_07930 PF02091 Glycyl-tRNA synthetase alpha subunit AMR71_07935 PF02092 Glycyl-tRNA synthetase beta subunit AMR71_07940 PF00571 CBS domain AMR71_07940 PF08279 HTH domain AMR71_07945 PF03618 Kinase/pyrophosphorylase AMR71_07950 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AMR71_07955 PF10410 DnaB-helicase binding domain of primase AMR71_07955 PF08275 DNA primase catalytic core, N-terminal domain AMR71_07955 PF01807 CHC2 zinc finger AMR71_07960 PF04542 Sigma-70 region 2 AMR71_07960 PF03979 Sigma-70 factor, region 1.1 AMR71_07960 PF04545 Sigma-70, region 4 AMR71_07960 PF00140 Sigma-70 factor, region 1.2 AMR71_07960 PF04539 Sigma-70 region 3 AMR71_07965 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMR71_07970 PF04816 tRNA (adenine(22)-N(1))-methyltransferase AMR71_07975 PF01784 NIF3 (NGG1p interacting factor 3) AMR71_07980 PF02401 LytB protein AMR71_07990 PF00271 Helicase conserved C-terminal domain AMR71_07990 PF00270 DEAD/DEAH box helicase AMR71_07995 PF01261 Xylose isomerase-like TIM barrel AMR71_08000 PF11116 Protein of unknown function (DUF2624) AMR71_08005 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AMR71_08005 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AMR71_08010 PF00005 ABC transporter AMR71_08015 PF00950 ABC 3 transport family AMR71_08020 PF01475 Ferric uptake regulator family AMR71_08025 PF00480 ROK family AMR71_08040 PF04551 GcpE protein AMR71_08050 PF13302 Acetyltransferase (GNAT) domain AMR71_08055 PF06691 Protein of unknown function (DUF1189) AMR71_08060 PF04306 Protein of unknown function (DUF456) AMR71_08065 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AMR71_08065 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AMR71_08070 PF07690 Major Facilitator Superfamily AMR71_08080 PF12849 PBP superfamily domain AMR71_08085 PF00528 Binding-protein-dependent transport system inner membrane component AMR71_08090 PF00528 Binding-protein-dependent transport system inner membrane component AMR71_08095 PF00005 ABC transporter AMR71_08100 PF00005 ABC transporter AMR71_08120 PF00471 Ribosomal protein L33 AMR71_08125 PF01812 5-formyltetrahydrofolate cyclo-ligase family AMR71_08135 PF01694 Rhomboid family AMR71_08140 PF06014 Bacterial protein of unknown function (DUF910) AMR71_08145 PF00480 ROK family AMR71_08150 PF00884 Sulfatase AMR71_08155 PF00246 Zinc carboxypeptidase AMR71_08160 PF07690 Major Facilitator Superfamily AMR71_08165 PF01910 Thiamine-binding protein AMR71_08170 PF00753 Metallo-beta-lactamase superfamily AMR71_08175 PF11117 Protein of unknown function (DUF2626) AMR71_08180 PF03960 ArsC family AMR71_08190 PF01740 STAS domain AMR71_08190 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain AMR71_08195 PF00437 Type II/IV secretion system protein AMR71_08200 PF00482 Type II secretion system (T2SS), protein F AMR71_08205 PF07963 Prokaryotic N-terminal methylation motif AMR71_08210 PF07963 Prokaryotic N-terminal methylation motif AMR71_08230 PF14038 YqzE-like protein AMR71_08235 PF13028 Protein of unknown function (DUF3889) AMR71_08250 PF12389 Camelysin metallo-endopeptidase AMR71_08255 PF08671 Anti-repressor SinI AMR71_08255 PF01381 Helix-turn-helix AMR71_08260 PF11079 Bacterial protein YqhG of unknown function AMR71_08265 PF00176 SNF2 family N-terminal domain AMR71_08265 PF00271 Helicase conserved C-terminal domain AMR71_08270 PF01571 Aminomethyltransferase folate-binding domain AMR71_08270 PF08669 Glycine cleavage T-protein C-terminal barrel domain AMR71_08275 PF02347 Glycine cleavage system P-protein AMR71_08280 PF02347 Glycine cleavage system P-protein AMR71_08285 PF00581 Rhodanese-like domain AMR71_08290 PF03099 Biotin/lipoate A/B protein ligase family AMR71_08295 PF02742 Iron dependent repressor, metal binding and dimerisation domain AMR71_08295 PF01325 Iron dependent repressor, N-terminal DNA binding domain AMR71_08300 PF01734 Patatin-like phospholipase AMR71_08310 PF07136 Protein of unknown function (DUF1385) AMR71_08315 PF11085 Conserved membrane protein YqhR AMR71_08320 PF01220 Dehydroquinase class II AMR71_08325 PF01321 Creatinase/Prolidase N-terminal domain AMR71_08325 PF00557 Metallopeptidase family M24 AMR71_08330 PF09285 Elongation factor P, C-terminal AMR71_08330 PF08207 Elongation factor P (EF-P) KOW-like domain AMR71_08330 PF01132 Elongation factor P (EF-P) OB domain AMR71_08335 PF10942 Protein of unknown function (DUF2619) AMR71_08345 PF09548 Stage III sporulation protein AB (spore_III_AB) AMR71_08350 PF06686 Stage III sporulation protein AC/AD protein family AMR71_08355 PF06686 Stage III sporulation protein AC/AD protein family AMR71_08360 PF09546 Stage III sporulation protein AE (spore_III_AE) AMR71_08365 PF09581 Stage III sporulation protein AF (Spore_III_AF) AMR71_08375 PF12685 SpoIIIAH-like protein AMR71_08380 PF00364 Biotin-requiring enzyme AMR71_08385 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMR71_08385 PF02785 Biotin carboxylase C-terminal domain AMR71_08385 PF00289 Biotin carboxylase, N-terminal domain AMR71_08390 PF03780 Asp23 family, cell envelope-related function AMR71_08395 PF01029 NusB family AMR71_08400 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AMR71_08400 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AMR71_08405 PF13742 OB-fold nucleic acid binding domain AMR71_08405 PF02601 Exonuclease VII, large subunit AMR71_08410 PF02609 Exonuclease VII small subunit AMR71_08415 PF00348 Polyprenyl synthetase AMR71_08420 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AMR71_08420 PF02779 Transketolase, pyrimidine binding domain AMR71_08420 PF02780 Transketolase, C-terminal domain AMR71_08425 PF01479 S4 domain AMR71_08425 PF01728 FtsJ-like methyltransferase AMR71_08430 PF02863 Arginine repressor, C-terminal domain AMR71_08430 PF01316 Arginine repressor, DNA binding domain AMR71_08435 PF13476 AAA domain AMR71_08440 PF05580 SpoIVB peptidase S55 AMR71_08440 PF17820 PDZ domain AMR71_08445 PF08769 Sporulation initiation factor Spo0A C terminal AMR71_08445 PF00072 Response regulator receiver domain AMR71_08450 PF18801 response regulator aspartate phosphatase H, N terminal AMR71_08455 PF03009 Glycerophosphoryl diester phosphodiesterase family AMR71_08460 PF11118 Protein of unknown function (DUF2627) AMR71_08465 PF02954 Bacterial regulatory protein, Fis family AMR71_08465 PF00158 Sigma-54 interaction domain AMR71_08465 PF00989 PAS fold AMR71_08470 PF01515 Phosphate acetyl/butaryl transferase AMR71_08475 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AMR71_08475 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AMR71_08480 PF00871 Acetokinase family AMR71_08485 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMR71_08485 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMR71_08490 PF00676 Dehydrogenase E1 component AMR71_08495 PF02779 Transketolase, pyrimidine binding domain AMR71_08495 PF02780 Transketolase, C-terminal domain AMR71_08500 PF00364 Biotin-requiring enzyme AMR71_08500 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMR71_08500 PF02817 e3 binding domain AMR71_08510 PF00781 Diacylglycerol kinase catalytic domain AMR71_08515 PF06491 Disulphide isomerase AMR71_08520 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMR71_08525 PF00528 Binding-protein-dependent transport system inner membrane component AMR71_08530 PF00005 ABC transporter AMR71_08535 PF11728 Putative aromatic acid exporter C-terminal domain AMR71_08535 PF06081 Aromatic acid exporter family member 1 AMR71_08540 PF03734 L,D-transpeptidase catalytic domain AMR71_08550 PF01039 Carboxyl transferase domain AMR71_08555 PF07687 Peptidase dimerisation domain AMR71_08555 PF01546 Peptidase family M20/M25/M40 AMR71_08560 PF01584 CheW-like domain AMR71_08565 PF02096 60Kd inner membrane protein AMR71_08575 PF11798 IMS family HHH motif AMR71_08575 PF11799 impB/mucB/samB family C-terminal domain AMR71_08575 PF00817 impB/mucB/samB family AMR71_08580 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMR71_08580 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AMR71_08585 PF06800 Sugar transport protein AMR71_08600 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AMR71_08605 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AMR71_08610 PF02378 Phosphotransferase system, EIIC AMR71_08615 PF00232 Glycosyl hydrolase family 1 AMR71_08620 PF07702 UTRA domain AMR71_08620 PF00392 Bacterial regulatory proteins, gntR family AMR71_08625 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AMR71_08625 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AMR71_08630 PF12706 Beta-lactamase superfamily domain AMR71_08635 PF12897 Alanine-glyoxylate amino-transferase AMR71_08640 PF12146 Serine aminopeptidase, S33 AMR71_08645 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMR71_08650 PF01546 Peptidase family M20/M25/M40 AMR71_08660 PF14748 Pyrroline-5-carboxylate reductase dimerisation AMR71_08660 PF03807 NADP oxidoreductase coenzyme F420-dependent AMR71_08665 PF00753 Metallo-beta-lactamase superfamily AMR71_08670 PF00106 short chain dehydrogenase AMR71_08680 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMR71_08680 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMR71_08685 PF00485 Phosphoribulokinase / Uridine kinase family AMR71_08690 PF07690 Major Facilitator Superfamily AMR71_08695 PF08863 YolD-like protein AMR71_08700 PF11799 impB/mucB/samB family C-terminal domain AMR71_08700 PF00817 impB/mucB/samB family AMR71_08705 PF10787 Uncharacterised protein from bacillus cereus group AMR71_08710 PF00583 Acetyltransferase (GNAT) family AMR71_08715 PF04229 GrpB protein AMR71_08715 PF13673 Acetyltransferase (GNAT) domain AMR71_08720 PF03330 Lytic transglycolase AMR71_08725 PF01521 Iron-sulphur cluster biosynthesis AMR71_08730 PF10827 Protein of unknown function (DUF2552) AMR71_08735 PF18801 response regulator aspartate phosphatase H, N terminal AMR71_08740 PF12146 Serine aminopeptidase, S33 AMR71_08755 PF00248 Aldo/keto reductase family AMR71_08760 PF00293 NUDIX domain AMR71_08770 PF13673 Acetyltransferase (GNAT) domain AMR71_08780 PF05922 Peptidase inhibitor I9 AMR71_08780 PF00082 Subtilase family AMR71_08785 PF01944 Stage II sporulation protein M AMR71_08790 PF01475 Ferric uptake regulator family AMR71_08795 PF14004 Protein of unknown function (DUF4227) AMR71_08800 PF00589 Phage integrase family AMR71_08800 PF02899 Phage integrase, N-terminal SAM-like domain AMR71_08805 PF01676 Metalloenzyme superfamily AMR71_08810 PF01048 Phosphorylase superfamily AMR71_08815 PF07943 Penicillin-binding protein 5, C-terminal domain AMR71_08815 PF00768 D-alanyl-D-alanine carboxypeptidase AMR71_08820 PF01740 STAS domain AMR71_08825 PF13581 Histidine kinase-like ATPase domain AMR71_08830 PF04545 Sigma-70, region 4 AMR71_08830 PF04539 Sigma-70 region 3 AMR71_08830 PF04542 Sigma-70 region 2 AMR71_08835 PF12164 Stage V sporulation protein AA AMR71_08840 PF13782 Stage V sporulation protein AB AMR71_08845 PF03862 SpoVAC/SpoVAEB sporulation membrane protein AMR71_08850 PF07451 Stage V sporulation protein AD (SpoVAD) AMR71_08855 PF03862 SpoVAC/SpoVAEB sporulation membrane protein AMR71_08860 PF14097 Stage V sporulation protein AE1 AMR71_08865 PF03323 Bacillus/Clostridium GerA spore germination protein AMR71_08870 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMR71_08870 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMR71_08875 PF06207 Protein of unknown function (DUF1002) AMR71_08880 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AMR71_08885 PF07690 Major Facilitator Superfamily AMR71_08905 PF00677 Lumazine binding domain AMR71_08915 PF00885 6,7-dimethyl-8-ribityllumazine synthase AMR71_08920 PF00583 Acetyltransferase (GNAT) family AMR71_08925 PF03745 Domain of unknown function (DUF309) AMR71_08930 PF02616 Segregation and condensation protein ScpA AMR71_08935 PF04079 Segregation and condensation complex subunit ScpB AMR71_08940 PF13047 Protein of unknown function (DUF3907) AMR71_08945 PF07943 Penicillin-binding protein 5, C-terminal domain AMR71_08945 PF00768 D-alanyl-D-alanine carboxypeptidase AMR71_08950 PF07670 Nucleoside recognition AMR71_08955 PF07670 Nucleoside recognition AMR71_08960 PF00849 RNA pseudouridylate synthase AMR71_08960 PF01479 S4 domain AMR71_08965 PF00578 AhpC/TSA family AMR71_08970 PF05140 ResB-like family AMR71_08975 PF01578 Cytochrome C assembly protein AMR71_08980 PF00486 Transcriptional regulatory protein, C terminal AMR71_08980 PF00072 Response regulator receiver domain AMR71_08985 PF18698 Histidine kinase sensor domain AMR71_08985 PF00989 PAS fold AMR71_08985 PF00672 HAMP domain AMR71_08985 PF00512 His Kinase A (phospho-acceptor) domain AMR71_08985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMR71_08990 PF04542 Sigma-70 region 2 AMR71_08990 PF08281 Sigma-70, region 4 AMR71_09000 PF01476 LysM domain AMR71_09000 PF01551 Peptidase family M23 AMR71_09005 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMR71_09005 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMR71_09005 PF01842 ACT domain AMR71_09010 PF12822 ECF transporter, substrate-specific component AMR71_09020 PF14493 Helix-turn-helix domain AMR71_09025 PF00270 DEAD/DEAH box helicase AMR71_09025 PF00271 Helicase conserved C-terminal domain AMR71_09030 PF02517 CPBP intramembrane metalloprotease AMR71_09035 PF01476 LysM domain AMR71_09040 PF10864 Protein of unknown function (DUF2663) AMR71_09045 PF00149 Calcineurin-like phosphoesterase AMR71_09050 PF05389 Negative regulator of genetic competence (MecA) AMR71_09055 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AMR71_09055 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AMR71_09065 PF13367 PrsW family intramembrane metalloprotease AMR71_09070 PF01471 Putative peptidoglycan binding domain AMR71_09070 PF07486 Cell Wall Hydrolase AMR71_09075 PF14620 YpeB sporulation AMR71_09075 PF03413 Peptidase propeptide and YPEB domain AMR71_09080 PF07238 PilZ domain AMR71_09080 PF12945 Flagellar protein YcgR AMR71_09085 PF17313 Family of unknown function (DUF5359) AMR71_09090 PF02224 Cytidylate kinase AMR71_09095 PF00575 S1 RNA binding domain AMR71_09100 PF01070 FMN-dependent dehydrogenase AMR71_09110 PF14045 YIEGIA protein AMR71_09120 PF01926 50S ribosome-binding GTPase AMR71_09120 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AMR71_09125 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AMR71_09125 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AMR71_09130 PF10966 Protein of unknown function (DUF2768) AMR71_09140 PF09547 Stage IV sporulation protein A (spore_IV_A) AMR71_09145 PF00216 Bacterial DNA-binding protein AMR71_09150 PF01227 GTP cyclohydrolase I AMR71_09155 PF02081 Tryptophan RNA-binding attenuator protein AMR71_09160 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 AMR71_09165 PF01209 ubiE/COQ5 methyltransferase family AMR71_09170 PF00348 Polyprenyl synthetase AMR71_09175 PF00334 Nucleoside diphosphate kinase AMR71_09180 PF01739 CheR methyltransferase, SAM binding domain AMR71_09180 PF03705 CheR methyltransferase, all-alpha domain AMR71_09185 PF01264 Chorismate synthase AMR71_09190 PF01761 3-dehydroquinate synthase AMR71_09195 PF07736 Chorismate mutase type I AMR71_09200 PF04715 Anthranilate synthase component I, N terminal region AMR71_09200 PF00425 chorismate binding enzyme AMR71_09205 PF00591 Glycosyl transferase family, a/b domain AMR71_09205 PF02885 Glycosyl transferase family, helical bundle domain AMR71_09210 PF00218 Indole-3-glycerol phosphate synthase AMR71_09215 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AMR71_09220 PF00291 Pyridoxal-phosphate dependent enzyme AMR71_09225 PF00290 Tryptophan synthase alpha chain AMR71_09230 PF00155 Aminotransferase class I and II AMR71_09235 PF02153 Prephenate dehydrogenase AMR71_09235 PF01842 ACT domain AMR71_09240 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMR71_09250 PF08864 UPF0302 domain AMR71_09250 PF08858 IDEAL domain AMR71_09255 PF10673 Protein of unknown function (DUF2487) AMR71_09260 PF00355 Rieske [2Fe-2S] domain AMR71_09265 PF00033 Cytochrome b/b6/petB AMR71_09270 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMR71_09270 PF00032 Cytochrome b(C-terminal)/b6/petD AMR71_09275 PF07187 Protein of unknown function (DUF1405) AMR71_09280 PF09577 Sporulation protein YpjB (SpoYpjB) AMR71_09285 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AMR71_09285 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AMR71_09290 PF03819 MazG nucleotide pyrophosphohydrolase domain AMR71_09295 PF01113 Dihydrodipicolinate reductase, N-terminus AMR71_09295 PF05173 Dihydrodipicolinate reductase, C-terminus AMR71_09300 PF02142 MGS-like domain AMR71_09305 PF02585 GlcNAc-PI de-N-acetylase AMR71_09310 PF00534 Glycosyl transferases group 1 AMR71_09310 PF13439 Glycosyltransferase Family 4 AMR71_09315 PF01743 Poly A polymerase head domain AMR71_09315 PF13735 tRNA nucleotidyltransferase domain 2 putative AMR71_09315 PF12627 Probable RNA and SrmB- binding site of polymerase A AMR71_09320 PF08279 HTH domain AMR71_09320 PF03099 Biotin/lipoate A/B protein ligase family AMR71_09320 PF02237 Biotin protein ligase C terminal domain AMR71_09325 PF02548 Ketopantoate hydroxymethyltransferase AMR71_09330 PF02569 Pantoate-beta-alanine ligase AMR71_09335 PF02261 Aspartate decarboxylase AMR71_09340 PF04851 Type III restriction enzyme, res subunit AMR71_09340 PF13307 Helicase C-terminal domain AMR71_09340 PF00929 Exonuclease AMR71_09345 PF17881 Domain of unknown function (DUF5590) AMR71_09345 PF03413 Peptidase propeptide and YPEB domain AMR71_09350 PF01336 OB-fold nucleic acid binding domain AMR71_09350 PF00152 tRNA synthetases class II (D, K and N) AMR71_09355 PF07261 Replication initiation and membrane attachment AMR71_09360 PF10576 Iron-sulfur binding domain of endonuclease III AMR71_09360 PF00633 Helix-hairpin-helix motif AMR71_09360 PF00730 HhH-GPD superfamily base excision DNA repair protein AMR71_09370 PF00905 Penicillin binding protein transpeptidase domain AMR71_09370 PF00912 Transglycosylase AMR71_09375 PF03838 Recombination protein U AMR71_09380 PF10720 Protein of unknown function (DUF2515) AMR71_09400 PF14179 YppG-like protein AMR71_09410 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AMR71_09415 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMR71_09465 PF01367 5'-3' exonuclease, C-terminal SAM fold AMR71_09465 PF09281 Taq polymerase, exonuclease AMR71_09465 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AMR71_09465 PF00476 DNA polymerase family A AMR71_09525 PF03354 Phage Terminase AMR71_09605 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AMR71_09605 PF05257 CHAP domain AMR71_09630 PF05105 Bacteriophage holin family AMR71_09635 PF05036 Sporulation related domain AMR71_09635 PF01520 N-acetylmuramoyl-L-alanine amidase AMR71_09655 PF18801 response regulator aspartate phosphatase H, N terminal AMR71_09655 PF17874 MalT-like TPR region AMR71_09670 PF00271 Helicase conserved C-terminal domain AMR71_09670 PF00270 DEAD/DEAH box helicase AMR71_09670 PF09369 Domain of unknown function (DUF1998) AMR71_09675 PF13482 RNase_H superfamily AMR71_09680 PF06908 YspA SLOG family AMR71_09685 PF05103 DivIVA protein AMR71_09690 PF02926 THUMP domain AMR71_09690 PF01170 Putative RNA methylase family UPF0020 AMR71_09700 PF13307 Helicase C-terminal domain AMR71_09705 PF02074 Carboxypeptidase Taq (M32) metallopeptidase AMR71_09715 PF00860 Permease family AMR71_09720 PF01522 Polysaccharide deacetylase AMR71_09725 PF13673 Acetyltransferase (GNAT) domain AMR71_09725 PF04229 GrpB protein AMR71_09730 PF00195 Chalcone and stilbene synthases, N-terminal domain AMR71_09730 PF02797 Chalcone and stilbene synthases, C-terminal domain AMR71_09735 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family AMR71_09740 PF00350 Dynamin family AMR71_09750 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AMR71_09750 PF01367 5'-3' exonuclease, C-terminal SAM fold AMR71_09760 PF13456 Reverse transcriptase-like AMR71_09765 PF02592 Putative vitamin uptake transporter AMR71_09770 PF13456 Reverse transcriptase-like AMR71_09775 PF10782 Zinc-finger AMR71_09785 PF00313 'Cold-shock' DNA-binding domain AMR71_09795 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase AMR71_09795 PF00534 Glycosyl transferases group 1 AMR71_09800 PF04204 Homoserine O-succinyltransferase AMR71_09805 PF01268 Formate--tetrahydrofolate ligase AMR71_09810 PF00255 Glutathione peroxidase AMR71_09815 PF01966 HD domain AMR71_09820 PF13769 Virulence factor AMR71_09820 PF08712 Scaffold protein Nfu/NifU N terminal AMR71_09825 PF00920 Dehydratase family AMR71_09830 PF06491 Disulphide isomerase AMR71_09835 PF04445 Putative SAM-dependent methyltransferase AMR71_09840 PF14005 YpjP-like protein AMR71_09845 PF04608 Phosphatidylglycerophosphatase A AMR71_09850 PF00303 Thymidylate synthase AMR71_09855 PF00186 Dihydrofolate reductase AMR71_09865 PF03006 Haemolysin-III related AMR71_09870 PF00158 Sigma-54 interaction domain AMR71_09870 PF08461 Ribonuclease R winged-helix domain AMR71_09875 PF00585 C-terminal regulatory domain of Threonine dehydratase AMR71_09875 PF00291 Pyridoxal-phosphate dependent enzyme AMR71_09880 PF10751 Protein of unknown function (DUF2535) AMR71_09885 PF02645 Uncharacterised protein, DegV family COG1307 AMR71_09890 PF02630 SCO1/SenC AMR71_09895 PF13472 GDSL-like Lipase/Acylhydrolase family AMR71_09900 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) AMR71_09905 PF17431 Uncharacterized YmpT-like AMR71_09920 PF01047 MarR family AMR71_09925 PF01625 Peptide methionine sulfoxide reductase AMR71_09930 PF01641 SelR domain AMR71_09935 PF02719 Polysaccharide biosynthesis protein AMR71_09945 PF12996 DUF based on E. rectale Gene description (DUF3880) AMR71_09960 PF00535 Glycosyl transferase family 2 AMR71_09965 PF02954 Bacterial regulatory protein, Fis family AMR71_09965 PF13426 PAS domain AMR71_09965 PF00158 Sigma-54 interaction domain AMR71_09970 PF12544 Lysine-2,3-aminomutase AMR71_09975 PF14122 YokU-like protein, putative antitoxin AMR71_09980 PF06855 YozE SAM-like fold AMR71_09990 PF01569 PAP2 superfamily AMR71_09995 PF14191 YodL-like AMR71_10000 PF01048 Phosphorylase superfamily AMR71_10005 PF02557 D-alanyl-D-alanine carboxypeptidase AMR71_10015 PF08241 Methyltransferase domain AMR71_10020 PF03572 Peptidase family S41 AMR71_10020 PF17820 PDZ domain AMR71_10020 PF01471 Putative peptidoglycan binding domain AMR71_10025 PF00474 Sodium:solute symporter family AMR71_10030 PF11755 Protein of unknown function (DUF3311) AMR71_10035 PF00881 Nitroreductase family AMR71_10040 PF01638 HxlR-like helix-turn-helix AMR71_10055 PF00892 EamA-like transporter family AMR71_10065 PF08830 Protein of unknown function (DUF1806) AMR71_10070 PF02585 GlcNAc-PI de-N-acetylase AMR71_10075 PF01554 MatE AMR71_10080 PF02457 DisA bacterial checkpoint controller nucleotide-binding AMR71_10080 PF10372 Bacterial membrane-spanning protein N-terminus AMR71_10085 PF01476 LysM domain AMR71_10085 PF00877 NlpC/P60 family AMR71_10090 PF00080 Copper/zinc superoxide dismutase (SODC) AMR71_10090 PF13627 Prokaryotic lipoprotein-attachment site AMR71_10095 PF07728 AAA domain (dynein-related subfamily) AMR71_10100 PF00092 von Willebrand factor type A domain AMR71_10105 PF00676 Dehydrogenase E1 component AMR71_10105 PF16078 2-oxoglutarate dehydrogenase N-terminus AMR71_10105 PF16870 2-oxoglutarate dehydrogenase C-terminal AMR71_10105 PF02779 Transketolase, pyrimidine binding domain AMR71_10110 PF02817 e3 binding domain AMR71_10110 PF00364 Biotin-requiring enzyme AMR71_10110 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMR71_10115 PF01758 Sodium Bile acid symporter family AMR71_10120 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AMR71_10120 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AMR71_10125 PF13243 Squalene-hopene cyclase C-terminal domain AMR71_10125 PF13249 Squalene-hopene cyclase N-terminal domain AMR71_10135 PF00171 Aldehyde dehydrogenase family AMR71_10145 PF08000 Bacterial PH domain AMR71_10155 PF01258 Prokaryotic dksA/traR C4-type zinc finger AMR71_10160 PF09382 RQC domain AMR71_10160 PF16124 RecQ zinc-binding AMR71_10160 PF00271 Helicase conserved C-terminal domain AMR71_10160 PF00570 HRDC domain AMR71_10160 PF00270 DEAD/DEAH box helicase AMR71_10165 PF01476 LysM domain AMR71_10165 PF06725 3D domain AMR71_10175 PF04238 Protein of unknown function (DUF420) AMR71_10180 PF00285 Citrate synthase, C-terminal domain AMR71_10185 PF03972 MmgE/PrpD family AMR71_10200 PF00324 Amino acid permease AMR71_10205 PF01022 Bacterial regulatory protein, arsR family AMR71_10215 PF13280 WYL domain AMR71_10215 PF08279 HTH domain AMR71_10220 PF06445 GyrI-like small molecule binding domain AMR71_10225 PF00753 Metallo-beta-lactamase superfamily AMR71_10230 PF13305 Tetracyclin repressor-like, C-terminal domain AMR71_10230 PF00440 Bacterial regulatory proteins, tetR family AMR71_10240 PF13761 Domain of unknown function (DUF4166) AMR71_10245 PF14158 YndJ-like protein AMR71_10255 PF01588 Putative tRNA binding domain AMR71_10265 PF04616 Glycosyl hydrolases family 43 AMR71_10265 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain AMR71_10270 PF00480 ROK family AMR71_10275 PF01261 Xylose isomerase-like TIM barrel AMR71_10280 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMR71_10280 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMR71_10285 PF00457 Glycosyl hydrolases family 11 AMR71_10290 PF00384 Molybdopterin oxidoreductase AMR71_10290 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AMR71_10290 PF01568 Molydopterin dinucleotide binding domain AMR71_10295 PF00067 Cytochrome P450 AMR71_10300 PF14748 Pyrroline-5-carboxylate reductase dimerisation AMR71_10300 PF03807 NADP oxidoreductase coenzyme F420-dependent AMR71_10305 PF00696 Amino acid kinase family AMR71_10305 PF01472 PUA domain AMR71_10310 PF00171 Aldehyde dehydrogenase family AMR71_10315 PF00583 Acetyltransferase (GNAT) family AMR71_10320 PF13411 MerR HTH family regulatory protein AMR71_10320 PF06445 GyrI-like small molecule binding domain AMR71_10325 PF00664 ABC transporter transmembrane region AMR71_10325 PF00005 ABC transporter AMR71_10330 PF00664 ABC transporter transmembrane region AMR71_10330 PF00005 ABC transporter AMR71_10335 PF03466 LysR substrate binding domain AMR71_10335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMR71_10340 PF01645 Conserved region in glutamate synthase AMR71_10340 PF04898 Glutamate synthase central domain AMR71_10340 PF00310 Glutamine amidotransferases class-II AMR71_10340 PF01493 GXGXG motif AMR71_10345 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AMR71_10345 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMR71_10350 PF07690 Major Facilitator Superfamily AMR71_10355 PF18267 Rubredoxin NAD+ reductase C-terminal domain AMR71_10355 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMR71_10355 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AMR71_10355 PF04324 BFD-like [2Fe-2S] binding domain AMR71_10360 PF01568 Molydopterin dinucleotide binding domain AMR71_10360 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AMR71_10360 PF00384 Molybdopterin oxidoreductase AMR71_10365 PF18267 Rubredoxin NAD+ reductase C-terminal domain AMR71_10365 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AMR71_10365 PF04324 BFD-like [2Fe-2S] binding domain AMR71_10365 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AMR71_10365 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMR71_10370 PF00355 Rieske [2Fe-2S] domain AMR71_10375 PF04239 Protein of unknown function (DUF421) AMR71_10380 PF01095 Pectinesterase AMR71_10385 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AMR71_10390 PF01554 MatE AMR71_10415 PF00296 Luciferase-like monooxygenase AMR71_10425 PF02602 Uroporphyrinogen-III synthase HemD AMR71_10430 PF09335 SNARE associated Golgi protein AMR71_10435 PF00483 Nucleotidyl transferase AMR71_10440 PF04138 GtrA-like protein AMR71_10445 PF12728 Helix-turn-helix domain AMR71_10455 PF03845 Spore germination protein AMR71_10460 PF03323 Bacillus/Clostridium GerA spore germination protein AMR71_10465 PF13183 4Fe-4S dicluster domain AMR71_10465 PF02754 Cysteine-rich domain AMR71_10470 PF01565 FAD binding domain AMR71_10470 PF02913 FAD linked oxidases, C-terminal domain AMR71_10475 PF13556 PucR C-terminal helix-turn-helix domain AMR71_10475 PF17853 GGDEF-like domain AMR71_10475 PF05651 Putative sugar diacid recognition AMR71_10485 PF14552 Tautomerase enzyme AMR71_10490 PF00455 DeoR C terminal sensor domain AMR71_10490 PF08220 DeoR-like helix-turn-helix domain AMR71_10500 PF02638 Glycosyl hydrolase-like 10 AMR71_10505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMR71_10505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMR71_10505 PF02770 Acyl-CoA dehydrogenase, middle domain AMR71_10510 PF13193 AMP-binding enzyme C-terminal domain AMR71_10510 PF00501 AMP-binding enzyme AMR71_10515 PF00289 Biotin carboxylase, N-terminal domain AMR71_10515 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMR71_10515 PF02785 Biotin carboxylase C-terminal domain AMR71_10520 PF00364 Biotin-requiring enzyme AMR71_10525 PF00682 HMGL-like AMR71_10530 PF00378 Enoyl-CoA hydratase/isomerase AMR71_10535 PF01039 Carboxyl transferase domain AMR71_10540 PF13193 AMP-binding enzyme C-terminal domain AMR71_10540 PF16177 Acetyl-coenzyme A synthetase N-terminus AMR71_10540 PF00501 AMP-binding enzyme AMR71_10545 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AMR71_10545 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AMR71_10550 PF00175 Oxidoreductase NAD-binding domain AMR71_10550 PF00667 FAD binding domain AMR71_10550 PF00258 Flavodoxin AMR71_10555 PF00171 Aldehyde dehydrogenase family AMR71_10575 PF13091 PLD-like domain AMR71_10580 PF01418 Helix-turn-helix domain, rpiR family AMR71_10580 PF01380 SIS domain AMR71_10585 PF00294 pfkB family carbohydrate kinase AMR71_10590 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AMR71_10590 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AMR71_10595 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AMR71_10595 PF02378 Phosphotransferase system, EIIC AMR71_10595 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AMR71_10600 PF01116 Fructose-bisphosphate aldolase class-II AMR71_10605 PF07690 Major Facilitator Superfamily AMR71_10610 PF01047 MarR family AMR71_10615 PF14449 Pre-toxin TG AMR71_10615 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues AMR71_10615 PF04740 LXG domain of WXG superfamily AMR71_10645 PF17288 Terminase RNAseH like domain AMR71_10645 PF04466 Phage terminase large subunit AMR71_10650 PF04860 Phage portal protein AMR71_10655 PF04233 Phage Mu protein F like protein AMR71_10670 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AMR71_10685 PF00834 Ribulose-phosphate 3 epimerase family AMR71_10710 PF02056 Family 4 glycosyl hydrolase AMR71_10710 PF11975 Family 4 glycosyl hydrolase C-terminal domain AMR71_10715 PF00171 Aldehyde dehydrogenase family AMR71_10720 PF04616 Glycosyl hydrolases family 43 AMR71_10720 PF03422 Carbohydrate binding module (family 6) AMR71_10725 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain AMR71_10725 PF17189 Glycosyl hydrolase family 30 beta sandwich domain AMR71_10730 PF00072 Response regulator receiver domain AMR71_10730 PF00486 Transcriptional regulatory protein, C terminal AMR71_10735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMR71_10735 PF00512 His Kinase A (phospho-acceptor) domain AMR71_10745 PF00874 PRD domain AMR71_10745 PF03123 CAT RNA binding domain AMR71_10750 PF02378 Phosphotransferase system, EIIC AMR71_10750 PF00367 phosphotransferase system, EIIB AMR71_10750 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AMR71_10755 PF00232 Glycosyl hydrolase family 1 AMR71_10760 PF13411 MerR HTH family regulatory protein AMR71_10765 PF07859 alpha/beta hydrolase fold AMR71_10765 PF00934 PE family AMR71_10770 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMR71_10785 PF01494 FAD binding domain AMR71_10800 PF01042 Endoribonuclease L-PSP AMR71_10805 PF00291 Pyridoxal-phosphate dependent enzyme AMR71_10815 PF01022 Bacterial regulatory protein, arsR family AMR71_10820 PF02040 Arsenical pump membrane protein AMR71_10825 PF01451 Low molecular weight phosphotyrosine protein phosphatase AMR71_10830 PF12464 Maltose acetyltransferase AMR71_10830 PF14602 Hexapeptide repeat of succinyl-transferase AMR71_10835 PF00180 Isocitrate/isopropylmalate dehydrogenase AMR71_10840 PF07690 Major Facilitator Superfamily AMR71_10850 PF00521 DNA gyrase/topoisomerase IV, subunit A AMR71_10850 PF03989 DNA gyrase C-terminal domain, beta-propeller AMR71_10855 PF01751 Toprim domain AMR71_10855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMR71_10855 PF00986 DNA gyrase B subunit, carboxyl terminus AMR71_10855 PF00204 DNA gyrase B AMR71_10860 PF13380 CoA binding domain AMR71_10865 PF02660 Glycerol-3-phosphate acyltransferase AMR71_10870 PF01521 Iron-sulphur cluster biosynthesis AMR71_10880 PF03061 Thioesterase superfamily AMR71_10890 PF08177 Small acid-soluble spore protein N family AMR71_10895 PF00578 AhpC/TSA family AMR71_10900 PF00330 Aconitase family (aconitate hydratase) AMR71_10900 PF00694 Aconitase C-terminal domain AMR71_10910 PF08179 Small acid-soluble spore protein P family AMR71_10920 PF11084 Protein of unknown function (DUF2621) AMR71_10925 PF07301 Protein of unknown function (DUF1453) AMR71_10930 PF02683 Cytochrome C biogenesis protein transmembrane region AMR71_10935 PF09388 Spo0E like sporulation regulatory protein AMR71_10940 PF03672 Uncharacterised protein family (UPF0154) AMR71_10945 PF10747 Sporulation inhibitor of replication protein SirA AMR71_10950 PF00456 Transketolase, thiamine diphosphate binding domain AMR71_10950 PF02779 Transketolase, pyrimidine binding domain AMR71_10950 PF02780 Transketolase, C-terminal domain AMR71_10955 PF05979 Bacterial protein of unknown function (DUF896) AMR71_10960 PF00239 Resolvase, N terminal domain AMR71_10965 PF01476 LysM domain AMR71_10970 PF01726 LexA DNA binding domain AMR71_10970 PF00717 Peptidase S24-like AMR71_10980 PF16800 IseA DL-endopeptidase inhibitor AMR71_10985 PF01740 STAS domain AMR71_10990 PF14040 Deoxyribonuclease NucA/NucB AMR71_10995 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase AMR71_11000 PF00089 Trypsin AMR71_11005 PF00667 FAD binding domain AMR71_11005 PF00067 Cytochrome P450 AMR71_11005 PF00175 Oxidoreductase NAD-binding domain AMR71_11005 PF00258 Flavodoxin AMR71_11010 PF00440 Bacterial regulatory proteins, tetR family AMR71_11010 PF16295 Tetracyclin repressor-like, C-terminal domain AMR71_11015 PF04239 Protein of unknown function (DUF421) AMR71_11035 PF02589 LUD domain AMR71_11040 PF02589 LUD domain AMR71_11040 PF11870 Domain of unknown function (DUF3390) AMR71_11040 PF13183 4Fe-4S dicluster domain AMR71_11045 PF02754 Cysteine-rich domain AMR71_11055 PF05368 NmrA-like family AMR71_11060 PF02082 Transcriptional regulator AMR71_11070 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) AMR71_11075 PF02735 Ku70/Ku80 beta-barrel domain AMR71_11080 PF01068 ATP dependent DNA ligase domain AMR71_11085 PF06912 Protein of unknown function (DUF1275) AMR71_11095 PF18801 response regulator aspartate phosphatase H, N terminal AMR71_11120 PF08818 Domain of unknown function (DU1801) AMR71_11140 PF04634 Protein of unknown function, DUF600 AMR71_11145 PF04740 LXG domain of WXG superfamily AMR71_11165 PF00107 Zinc-binding dehydrogenase AMR71_11165 PF08240 Alcohol dehydrogenase GroES-like domain AMR71_11180 PF18801 response regulator aspartate phosphatase H, N terminal AMR71_11215 PF03951 Glutamine synthetase, beta-Grasp domain AMR71_11215 PF00120 Glutamine synthetase, catalytic domain AMR71_11220 PF13411 MerR HTH family regulatory protein AMR71_11225 PF06838 Methionine gamma-lyase AMR71_11230 PF16360 GTP-binding GTPase Middle Region AMR71_11230 PF13167 GTP-binding GTPase N-terminal AMR71_11230 PF01926 50S ribosome-binding GTPase AMR71_11235 PF00004 ATPase family associated with various cellular activities (AAA) AMR71_11235 PF17866 AAA lid domain AMR71_11240 PF01520 N-acetylmuramoyl-L-alanine amidase AMR71_11240 PF05036 Sporulation related domain AMR71_11250 PF00268 Ribonucleotide reductase, small chain AMR71_11255 PF02867 Ribonucleotide reductase, barrel domain AMR71_11255 PF00317 Ribonucleotide reductase, all-alpha domain AMR71_11255 PF08343 Ribonucleotide reductase N-terminal AMR71_11260 PF07972 NrdI Flavodoxin like AMR71_11275 PF17209 Hfq protein AMR71_11285 PF12788 YmaF family AMR71_11300 PF00893 Small Multidrug Resistance protein AMR71_11305 PF00893 Small Multidrug Resistance protein AMR71_11310 PF02566 OsmC-like protein AMR71_11315 PF05908 Poly-gamma-glutamate hydrolase AMR71_11320 PF00082 Subtilase family AMR71_11325 PF17874 MalT-like TPR region AMR71_11325 PF18801 response regulator aspartate phosphatase H, N terminal AMR71_11330 PF05908 Poly-gamma-glutamate hydrolase AMR71_11335 PF02559 CarD-like/TRCF domain AMR71_11350 PF17735 Biofilm surface layer A AMR71_11355 PF01119 DNA mismatch repair protein, C-terminal domain AMR71_11355 PF08676 MutL C terminal dimerisation domain AMR71_11360 PF05192 MutS domain III AMR71_11360 PF01624 MutS domain I AMR71_11360 PF05190 MutS family domain IV AMR71_11360 PF00488 MutS domain V AMR71_11360 PF05188 MutS domain II AMR71_11365 PF10628 Outer spore coat protein E (CotE) AMR71_11370 PF06133 Control of competence regulator ComK, YlbF/YmcA AMR71_11375 PF04055 Radical SAM superfamily AMR71_11375 PF00919 Uncharacterized protein family UPF0004 AMR71_11375 PF01938 TRAM domain AMR71_11385 PF00155 Aminotransferase class I and II AMR71_11390 PF00107 Zinc-binding dehydrogenase AMR71_11390 PF08240 Alcohol dehydrogenase GroES-like domain AMR71_11395 PF00873 AcrB/AcrD/AcrF family AMR71_11400 PF04232 Stage V sporulation protein S (SpoVS) AMR71_11405 PF13277 YmdB-like protein AMR71_11410 PF00013 KH domain AMR71_11410 PF12072 Domain of unknown function (DUF3552) AMR71_11410 PF01966 HD domain AMR71_11415 PF00154 recA bacterial DNA recombination protein AMR71_11420 PF18146 Damage-inducible protein CinA KH domain AMR71_11420 PF02464 Competence-damaged protein AMR71_11420 PF00994 Probable molybdopterin binding domain AMR71_11425 PF01066 CDP-alcohol phosphatidyltransferase AMR71_11430 PF13464 Domain of unknown function (DUF4115) AMR71_11435 PF11868 Protein of unknown function (DUF3388) AMR71_11440 PF11588 Protein of unknown function (DUF3243) AMR71_11450 PF03176 MMPL family AMR71_11460 PF00675 Insulinase (Peptidase family M16) AMR71_11460 PF05193 Peptidase M16 inactive domain AMR71_11465 PF05193 Peptidase M16 inactive domain AMR71_11470 PF03176 MMPL family AMR71_11475 PF07690 Major Facilitator Superfamily AMR71_11480 PF00392 Bacterial regulatory proteins, gntR family AMR71_11480 PF07702 UTRA domain AMR71_11485 PF17854 FtsK alpha domain AMR71_11485 PF09397 Ftsk gamma domain AMR71_11485 PF01580 FtsK/SpoIIIE family AMR71_11490 PF14035 YlzJ-like protein AMR71_11495 PF00574 Clp protease AMR71_11500 PF00753 Metallo-beta-lactamase superfamily AMR71_11500 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AMR71_11500 PF17770 Ribonuclease J C-terminal domain AMR71_11505 PF00701 Dihydrodipicolinate synthetase family AMR71_11510 PF00696 Amino acid kinase family AMR71_11510 PF13840 ACT domain AMR71_11515 PF02774 Semialdehyde dehydrogenase, dimerisation domain AMR71_11515 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMR71_11520 PF02441 Flavoprotein AMR71_11525 PF16924 Dipicolinate synthase subunit A N-terminal domain AMR71_11525 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AMR71_11530 PF05239 PRC-barrel domain AMR71_11535 PF13537 Glutamine amidotransferase domain AMR71_11535 PF00733 Asparagine synthase AMR71_11555 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMR71_11555 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMR71_11580 PF01658 Myo-inositol-1-phosphate synthase AMR71_11610 PF00334 Nucleoside diphosphate kinase AMR71_11615 PF01941 S-adenosylmethionine synthetase (AdoMet synthetase) AMR71_11620 PF00144 Beta-lactamase AMR71_11650 PF00664 ABC transporter transmembrane region AMR71_11650 PF00005 ABC transporter AMR71_11655 PF00664 ABC transporter transmembrane region AMR71_11655 PF00005 ABC transporter AMR71_11670 PF05193 Peptidase M16 inactive domain AMR71_11670 PF00675 Insulinase (Peptidase family M16) AMR71_11675 PF01522 Polysaccharide deacetylase AMR71_11680 PF00575 S1 RNA binding domain AMR71_11680 PF01138 3' exoribonuclease family, domain 1 AMR71_11680 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AMR71_11680 PF00013 KH domain AMR71_11680 PF03725 3' exoribonuclease family, domain 2 AMR71_11685 PF00312 Ribosomal protein S15 AMR71_11690 PF01687 Riboflavin kinase AMR71_11690 PF06574 FAD synthetase AMR71_11695 PF16198 tRNA pseudouridylate synthase B C-terminal domain AMR71_11695 PF01509 TruB family pseudouridylate synthase (N terminal domain) AMR71_11700 PF02033 Ribosome-binding factor A AMR71_11705 PF04456 Protein of unknown function (DUF503) AMR71_11710 PF04760 Translation initiation factor IF-2, N-terminal region AMR71_11710 PF11987 Translation-initiation factor 2 AMR71_11710 PF00009 Elongation factor Tu GTP binding domain AMR71_11715 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family AMR71_11720 PF04296 Protein of unknown function (DUF448) AMR71_11725 PF00575 S1 RNA binding domain AMR71_11725 PF08529 NusA N-terminal domain AMR71_11725 PF13184 NusA-like KH domain AMR71_11730 PF02576 RimP N-terminal domain AMR71_11730 PF17384 RimP C-terminal SH3 domain AMR71_11745 PF02011 Glycosyl hydrolase family 48 AMR71_11745 PF00942 Cellulose binding domain AMR71_11745 PF00759 Glycosyl hydrolase family 9 AMR71_11750 PF00759 Glycosyl hydrolase family 9 AMR71_11750 PF00942 Cellulose binding domain AMR71_11755 PF14579 Helix-hairpin-helix motif AMR71_11755 PF14480 DNA polymerase III polC-type N-terminus I AMR71_11755 PF02811 PHP domain AMR71_11755 PF11490 DNA polymerase III polC-type N-terminus II AMR71_11755 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AMR71_11755 PF07733 Bacterial DNA polymerase III alpha NTPase domain AMR71_11755 PF00929 Exonuclease AMR71_11760 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMR71_11760 PF04073 Aminoacyl-tRNA editing domain AMR71_11760 PF03129 Anticodon binding domain AMR71_11765 PF17820 PDZ domain AMR71_11765 PF02163 Peptidase family M50 AMR71_11770 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AMR71_11770 PF13288 DXP reductoisomerase C-terminal domain AMR71_11770 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AMR71_11780 PF01255 Putative undecaprenyl diphosphate synthase AMR71_11785 PF01765 Ribosome recycling factor AMR71_11790 PF00696 Amino acid kinase family AMR71_11795 PF00889 Elongation factor TS AMR71_11800 PF00318 Ribosomal protein S2 AMR71_11810 PF04545 Sigma-70, region 4 AMR71_11810 PF04539 Sigma-70 region 3 AMR71_11810 PF04542 Sigma-70 region 2 AMR71_11815 PF03975 CheD chemotactic sensory transduction AMR71_11820 PF04509 CheC-like family AMR71_11825 PF01584 CheW-like domain AMR71_11830 PF02895 Signal transducing histidine kinase, homodimeric domain AMR71_11830 PF07194 P2 response regulator binding domain AMR71_11830 PF01627 Hpt domain AMR71_11830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMR71_11830 PF01584 CheW-like domain AMR71_11835 PF00072 Response regulator receiver domain AMR71_11835 PF01339 CheB methylesterase AMR71_11840 PF10609 NUBPL iron-transfer P-loop NTPase AMR71_11845 PF00448 SRP54-type protein, GTPase domain AMR71_11850 PF00771 FHIPEP family AMR71_11855 PF01312 FlhB HrpN YscU SpaS Family AMR71_11860 PF01311 Bacterial export proteins, family 1 AMR71_11865 PF01313 Bacterial export proteins, family 3 AMR71_11870 PF00813 FliP family AMR71_11875 PF04347 Flagellar biosynthesis protein, FliO AMR71_11880 PF00072 Response regulator receiver domain AMR71_11885 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AMR71_11885 PF04509 CheC-like family AMR71_11890 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AMR71_11890 PF02154 Flagellar motor switch protein FliM AMR71_11895 PF03748 Flagellar basal body-associated protein FliL AMR71_11900 PF06289 Flagellar and Swarming motility proteins AMR71_11905 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMR71_11905 PF00460 Flagella basal body rod protein AMR71_11910 PF03963 Flagellar hook capping protein - N-terminal region AMR71_11920 PF03448 MgtE intracellular N domain AMR71_11925 PF02050 Flagellar FliJ protein AMR71_11930 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMR71_11930 PF18269 T3SS EscN ATPase C-terminal domain AMR71_11930 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMR71_11935 PF02108 Flagellar assembly protein FliH AMR71_11940 PF14841 FliG middle domain AMR71_11940 PF14842 FliG N-terminal domain AMR71_11940 PF01706 FliG C-terminal domain AMR71_11945 PF08345 Flagellar M-ring protein C-terminal AMR71_11945 PF01514 Secretory protein of YscJ/FliF family AMR71_11950 PF02049 Flagellar hook-basal body complex protein FliE AMR71_11955 PF00460 Flagella basal body rod protein AMR71_11955 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMR71_11960 PF00460 Flagella basal body rod protein AMR71_11965 PF08222 CodY helix-turn-helix domain AMR71_11965 PF06018 CodY GAF-like domain AMR71_11970 PF07724 AAA domain (Cdc48 subfamily) AMR71_11970 PF10431 C-terminal, D2-small domain, of ClpB protein AMR71_11970 PF00004 ATPase family associated with various cellular activities (AAA) AMR71_11975 PF00227 Proteasome subunit AMR71_11980 PF02899 Phage integrase, N-terminal SAM-like domain AMR71_11980 PF00589 Phage integrase family AMR71_11985 PF01134 Glucose inhibited division protein A AMR71_11990 PF01751 Toprim domain AMR71_11990 PF01396 Topoisomerase DNA binding C4 zinc finger AMR71_11990 PF01131 DNA topoisomerase AMR71_11995 PF02481 DNA recombination-mediator protein A AMR71_12000 PF02629 CoA binding domain AMR71_12000 PF00549 CoA-ligase AMR71_12005 PF08442 ATP-grasp domain AMR71_12005 PF00549 CoA-ligase AMR71_12010 PF01312 FlhB HrpN YscU SpaS Family AMR71_12020 PF01351 Ribonuclease HII AMR71_12025 PF01926 50S ribosome-binding GTPase AMR71_12030 PF01245 Ribosomal protein L19 AMR71_12035 PF01746 tRNA (Guanine-1)-methyltransferase AMR71_12040 PF01782 RimM N-terminal domain AMR71_12040 PF05239 PRC-barrel domain AMR71_12045 PF11068 YlqD protein AMR71_12055 PF00886 Ribosomal protein S16 AMR71_12060 PF00448 SRP54-type protein, GTPase domain AMR71_12060 PF02978 Signal peptide binding domain AMR71_12060 PF02881 SRP54-type protein, helical bundle domain AMR71_12065 PF04297 Putative helix-turn-helix protein, YlxM / p13 like AMR71_12070 PF00448 SRP54-type protein, GTPase domain AMR71_12070 PF02881 SRP54-type protein, helical bundle domain AMR71_12075 PF06470 SMC proteins Flexible Hinge Domain AMR71_12075 PF02463 RecF/RecN/SMC N terminal domain AMR71_12080 PF00035 Double-stranded RNA binding motif AMR71_12080 PF14622 Ribonuclease-III-like AMR71_12085 PF00550 Phosphopantetheine attachment site AMR71_12095 PF00698 Acyl transferase domain AMR71_12100 PF02504 Fatty acid synthesis protein AMR71_12110 PF00270 DEAD/DEAH box helicase AMR71_12110 PF00271 Helicase conserved C-terminal domain AMR71_12110 PF17191 RecG wedge domain AMR71_12115 PF03313 Serine dehydratase alpha chain AMR71_12120 PF01842 ACT domain AMR71_12120 PF03315 Serine dehydratase beta chain AMR71_12125 PF02734 DAK2 domain AMR71_12125 PF13684 Dihydroxyacetone kinase family AMR71_12130 PF03780 Asp23 family, cell envelope-related function AMR71_12135 PF00830 Ribosomal L28 family AMR71_12140 PF08183 Stage V sporulation protein family AMR71_12145 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain AMR71_12145 PF04263 Thiamin pyrophosphokinase, catalytic domain AMR71_12150 PF00834 Ribulose-phosphate 3 epimerase family AMR71_12155 PF16745 RsgA N-terminal domain AMR71_12155 PF03193 RsgA GTPase AMR71_12160 PF00069 Protein kinase domain AMR71_12160 PF03793 PASTA domain AMR71_12170 PF04055 Radical SAM superfamily AMR71_12175 PF01189 16S rRNA methyltransferase RsmB/F AMR71_12175 PF01029 NusB family AMR71_12180 PF02911 Formyl transferase, C-terminal domain AMR71_12180 PF00551 Formyl transferase AMR71_12185 PF01327 Polypeptide deformylase AMR71_12190 PF04851 Type III restriction enzyme, res subunit AMR71_12190 PF17764 3′ DNA-binding domain (3′BD) AMR71_12190 PF00271 Helicase conserved C-terminal domain AMR71_12190 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AMR71_12190 PF18074 Primosomal protein N C-terminal domain AMR71_12195 PF04127 DNA / pantothenate metabolism flavoprotein AMR71_12195 PF02441 Flavoprotein AMR71_12200 PF01192 RNA polymerase Rpb6 AMR71_12205 PF00625 Guanylate kinase AMR71_12210 PF04025 Domain of unknown function (DUF370) AMR71_12215 PF08340 Domain of unknown function (DUF1732) AMR71_12215 PF03755 YicC-like family, N-terminal region AMR71_12220 PF00690 Cation transporter/ATPase, N-terminus AMR71_12220 PF00689 Cation transporting ATPase, C-terminus AMR71_12235 PF01903 CbiX AMR71_12240 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMR71_12250 PF14306 PUA-like domain AMR71_12250 PF01747 ATP-sulfurylase AMR71_12255 PF01384 Phosphate transporter family AMR71_12260 PF01507 Phosphoadenosine phosphosulfate reductase family AMR71_12265 PF00156 Phosphoribosyl transferase domain AMR71_12270 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AMR71_12275 PF01180 Dihydroorotate dehydrogenase AMR71_12280 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B AMR71_12285 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AMR71_12285 PF02142 MGS-like domain AMR71_12285 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMR71_12290 PF00117 Glutamine amidotransferase class-I AMR71_12290 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AMR71_12295 PF01979 Amidohydrolase family AMR71_12300 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMR71_12300 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMR71_12305 PF00860 Permease family AMR71_12310 PF00156 Phosphoribosyl transferase domain AMR71_12315 PF01479 S4 domain AMR71_12315 PF00849 RNA pseudouridylate synthase AMR71_12320 PF01252 Signal peptidase (SPase) II AMR71_12325 PF01258 Prokaryotic dksA/traR C4-type zinc finger AMR71_12330 PF08264 Anticodon-binding domain of tRNA AMR71_12330 PF00133 tRNA synthetases class I (I, L, M and V) AMR71_12335 PF05103 DivIVA protein AMR71_12340 PF17774 Putative RNA-binding domain in YlmH AMR71_12340 PF01479 S4 domain AMR71_12345 PF02325 YGGT family AMR71_12350 PF04472 Cell division protein SepF AMR71_12355 PF01168 Alanine racemase, N-terminal domain AMR71_12365 PF05239 PRC-barrel domain AMR71_12370 PF00005 ABC transporter AMR71_12375 PF03829 PTS system glucitol/sorbitol-specific IIA component AMR71_12380 PF07663 Sorbitol phosphotransferase enzyme II C-terminus AMR71_12380 PF03612 Sorbitol phosphotransferase enzyme II N-terminus AMR71_12385 PF03608 PTS system enzyme II sorbitol-specific factor AMR71_12400 PF04198 Putative sugar-binding domain AMR71_12405 PF04545 Sigma-70, region 4 AMR71_12405 PF04542 Sigma-70 region 2 AMR71_12405 PF04539 Sigma-70 region 3 AMR71_12410 PF04542 Sigma-70 region 2 AMR71_12410 PF04545 Sigma-70, region 4 AMR71_12415 PF03419 Sporulation factor SpoIIGA AMR71_12420 PF05922 Peptidase inhibitor I9 AMR71_12420 PF00082 Subtilase family AMR71_12425 PF00091 Tubulin/FtsZ family, GTPase domain AMR71_12425 PF12327 FtsZ family, C-terminal domain AMR71_12430 PF02491 SHS2 domain inserted in FTSA AMR71_12435 PF06947 Protein of unknown function (DUF1290) AMR71_12440 PF05949 Bacterial protein of unknown function (DUF881) AMR71_12445 PF05949 Bacterial protein of unknown function (DUF881) AMR71_12450 PF08478 POTRA domain, FtsQ-type AMR71_12455 PF01565 FAD binding domain AMR71_12455 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AMR71_12460 PF03033 Glycosyltransferase family 28 N-terminal domain AMR71_12460 PF04101 Glycosyltransferase family 28 C-terminal domain AMR71_12465 PF01098 Cell cycle protein AMR71_12470 PF08245 Mur ligase middle domain AMR71_12470 PF02875 Mur ligase family, glutamate ligase domain AMR71_12475 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AMR71_12475 PF00953 Glycosyl transferase family 4 AMR71_12480 PF01225 Mur ligase family, catalytic domain AMR71_12480 PF02875 Mur ligase family, glutamate ligase domain AMR71_12480 PF08245 Mur ligase middle domain AMR71_12485 PF03793 PASTA domain AMR71_12485 PF03717 Penicillin-binding Protein dimerisation domain AMR71_12485 PF00905 Penicillin binding protein transpeptidase domain AMR71_12500 PF01795 MraW methylase family AMR71_12505 PF02381 MraZ protein, putative antitoxin-like AMR71_12510 PF10079 Bacillithiol biosynthesis BshC AMR71_12515 PF02558 Ketopantoate reductase PanE/ApbA AMR71_12515 PF08546 Ketopantoate reductase PanE/ApbA C terminal AMR71_12520 PF00583 Acetyltransferase (GNAT) family AMR71_12530 PF01783 Ribosomal L32p protein family AMR71_12535 PF02620 Large ribosomal RNA subunit accumulation protein YceD AMR71_12540 PF05636 HIGH Nucleotidyl Transferase AMR71_12545 PF13180 PDZ domain AMR71_12545 PF05362 Lon protease (S16) C-terminal proteolytic domain AMR71_12550 PF01734 Patatin-like phospholipase AMR71_12555 PF07670 Nucleoside recognition AMR71_12560 PF01467 Cytidylyltransferase-like AMR71_12570 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) AMR71_12575 PF06133 Control of competence regulator ComK, YlbF/YmcA AMR71_12585 PF14003 YlbE-like protein AMR71_12590 PF14071 Putative coat protein AMR71_12595 PF14504 CAP-associated N-terminal AMR71_12595 PF00188 Cysteine-rich secretory protein family AMR71_12600 PF00571 CBS domain AMR71_12605 PF08868 YugN-like family AMR71_12610 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) AMR71_12615 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AMR71_12620 PF00510 Cytochrome c oxidase subunit III AMR71_12625 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMR71_12630 PF00034 Cytochrome c AMR71_12630 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AMR71_12630 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AMR71_12635 PF01040 UbiA prenyltransferase family AMR71_12640 PF02628 Cytochrome oxidase assembly protein AMR71_12650 PF00289 Biotin carboxylase, N-terminal domain AMR71_12650 PF00364 Biotin-requiring enzyme AMR71_12650 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMR71_12650 PF00682 HMGL-like AMR71_12650 PF02436 Conserved carboxylase domain AMR71_12650 PF02785 Biotin carboxylase C-terminal domain AMR71_12655 PF01098 Cell cycle protein AMR71_12660 PF07408 Protein of unknown function (DUF1507) AMR71_12665 PF04960 Glutaminase AMR71_12675 PF13638 PIN domain AMR71_12675 PF02562 PhoH-like protein AMR71_12680 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) AMR71_12685 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) AMR71_12690 PF14036 YlaH-like protein AMR71_12710 PF13490 Putative zinc-finger AMR71_12725 PF00459 Inositol monophosphatase family AMR71_12735 PF06335 Protein of unknown function (DUF1054) AMR71_12740 PF05256 Uncharacterised protein family (UPF0223) AMR71_12745 PF01276 Orn/Lys/Arg decarboxylase, major domain AMR71_12745 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AMR71_12755 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMR71_12755 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMR71_12760 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMR71_12760 PF00364 Biotin-requiring enzyme AMR71_12760 PF02817 e3 binding domain AMR71_12765 PF02779 Transketolase, pyrimidine binding domain AMR71_12765 PF02780 Transketolase, C-terminal domain AMR71_12770 PF00676 Dehydrogenase E1 component AMR71_12785 PF01327 Polypeptide deformylase AMR71_12800 PF17770 Ribonuclease J C-terminal domain AMR71_12800 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AMR71_12800 PF00753 Metallo-beta-lactamase superfamily AMR71_12805 PF13382 Adenine deaminase C-terminal domain AMR71_12805 PF01979 Amidohydrolase family AMR71_12810 PF02080 TrkA-C domain AMR71_12810 PF02254 TrkA-N domain AMR71_12815 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like AMR71_12820 PF00989 PAS fold AMR71_12820 PF00512 His Kinase A (phospho-acceptor) domain AMR71_12820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMR71_12825 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AMR71_12825 PF18277 AbrB C-terminal domain AMR71_12835 PF02073 Thermophilic metalloprotease (M29) AMR71_12845 PF12848 ABC transporter AMR71_12845 PF00005 ABC transporter AMR71_12855 PF10502 Signal peptidase, peptidase S26 AMR71_12860 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AMR71_12860 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AMR71_12865 PF00294 pfkB family carbohydrate kinase AMR71_12870 PF00455 DeoR C terminal sensor domain AMR71_12870 PF08220 DeoR-like helix-turn-helix domain AMR71_12875 PF12704 MacB-like periplasmic core domain AMR71_12875 PF02687 FtsX-like permease family AMR71_12880 PF00005 ABC transporter AMR71_12885 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMR71_12900 PF02597 ThiS family AMR71_12905 PF02391 MoaE protein AMR71_12910 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AMR71_12915 PF03453 MoeA N-terminal region (domain I and II) AMR71_12915 PF00994 Probable molybdopterin binding domain AMR71_12915 PF03454 MoeA C-terminal region (domain IV) AMR71_12920 PF00899 ThiF family AMR71_12925 PF12804 MobA-like NTP transferase domain AMR71_12940 PF00578 AhpC/TSA family AMR71_12945 PF10417 C-terminal domain of 1-Cys peroxiredoxin AMR71_12945 PF00578 AhpC/TSA family AMR71_12950 PF00924 Mechanosensitive ion channel AMR71_12955 PF03698 Uncharacterised protein family (UPF0180) AMR71_12960 PF01546 Peptidase family M20/M25/M40 AMR71_12960 PF07687 Peptidase dimerisation domain AMR71_12965 PF00132 Bacterial transferase hexapeptide (six repeats) AMR71_12965 PF14602 Hexapeptide repeat of succinyl-transferase AMR71_12965 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal AMR71_12970 PF00258 Flavodoxin AMR71_12980 PF00258 Flavodoxin AMR71_12990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMR71_12990 PF03466 LysR substrate binding domain AMR71_13000 PF14156 Antirepressor AbbA AMR71_13005 PF04308 Ribonuclease H-like AMR71_13010 PF08796 Protein of unknown function (DUF1797) AMR71_13015 PF05067 Manganese containing catalase AMR71_13020 PF10388 EAL-domain associated signalling protein domain AMR71_13020 PF00563 EAL domain AMR71_13030 PF10518 TAT (twin-arginine translocation) pathway signal sequence AMR71_13030 PF00149 Calcineurin-like phosphoesterase AMR71_13035 PF01476 LysM domain AMR71_13035 PF03734 L,D-transpeptidase catalytic domain AMR71_13040 PF07690 Major Facilitator Superfamily AMR71_13055 PF14177 YkyB-like protein AMR71_13060 PF01584 CheW-like domain AMR71_13060 PF00072 Response regulator receiver domain AMR71_13070 PF06271 RDD family AMR71_13075 PF01545 Cation efflux family AMR71_13075 PF16916 Dimerisation domain of Zinc Transporter AMR71_13080 PF00155 Aminotransferase class I and II AMR71_13085 PF00512 His Kinase A (phospho-acceptor) domain AMR71_13085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMR71_13085 PF08447 PAS fold AMR71_13085 PF00989 PAS fold AMR71_13090 PF00905 Penicillin binding protein transpeptidase domain AMR71_13090 PF03717 Penicillin-binding Protein dimerisation domain AMR71_13095 PF00188 Cysteine-rich secretory protein family AMR71_13100 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMR71_13100 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMR71_13105 PF00106 short chain dehydrogenase AMR71_13110 PF00672 HAMP domain AMR71_13110 PF02743 Cache domain AMR71_13110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMR71_13120 PF11132 Transcriptional regulator protein (SplA) AMR71_13125 PF05524 PEP-utilising enzyme, N-terminal AMR71_13125 PF00391 PEP-utilising enzyme, mobile domain AMR71_13125 PF02896 PEP-utilising enzyme, TIM barrel domain AMR71_13130 PF00381 PTS HPr component phosphorylation site AMR71_13135 PF02378 Phosphotransferase system, EIIC AMR71_13135 PF00367 phosphotransferase system, EIIB AMR71_13135 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AMR71_13140 PF00874 PRD domain AMR71_13140 PF03123 CAT RNA binding domain AMR71_13145 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AMR71_13145 PF00356 Bacterial regulatory proteins, lacI family AMR71_13150 PF01321 Creatinase/Prolidase N-terminal domain AMR71_13150 PF00557 Metallopeptidase family M24 AMR71_13160 PF00578 AhpC/TSA family AMR71_13165 PF01943 Polysaccharide biosynthesis protein AMR71_13170 PF07486 Cell Wall Hydrolase AMR71_13180 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) AMR71_13190 PF14489 QueF-like protein AMR71_13195 PF04055 Radical SAM superfamily AMR71_13200 PF01242 6-pyruvoyl tetrahydropterin synthase AMR71_13205 PF06508 Queuosine biosynthesis protein QueC AMR71_13215 PF07724 AAA domain (Cdc48 subfamily) AMR71_13215 PF17871 AAA lid domain AMR71_13215 PF10431 C-terminal, D2-small domain, of ClpB protein AMR71_13215 PF00004 ATPase family associated with various cellular activities (AAA) AMR71_13220 PF01618 MotA/TolQ/ExbB proton channel family AMR71_13225 PF13677 Membrane MotB of proton-channel complex MotA/MotB AMR71_13225 PF00691 OmpA family AMR71_13230 PF01047 MarR family AMR71_13235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMR71_13235 PF00512 His Kinase A (phospho-acceptor) domain AMR71_13235 PF02743 Cache domain AMR71_13240 PF09388 Spo0E like sporulation regulatory protein AMR71_13245 PF03079 ARD/ARD' family AMR71_13250 PF00596 Class II Aldolase and Adducin N-terminal domain AMR71_13260 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain AMR71_13260 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain AMR71_13265 PF00155 Aminotransferase class I and II AMR71_13270 PF01636 Phosphotransferase enzyme family AMR71_13275 PF01008 Initiation factor 2 subunit family AMR71_13280 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AMR71_13280 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AMR71_13285 PF13426 PAS domain AMR71_13285 PF13188 PAS domain AMR71_13285 PF00989 PAS fold AMR71_13285 PF00512 His Kinase A (phospho-acceptor) domain AMR71_13285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMR71_13290 PF01757 Acyltransferase family AMR71_13300 PF04239 Protein of unknown function (DUF421) AMR71_13305 PF02386 Cation transport protein AMR71_13310 PF01435 Peptidase family M48 AMR71_13315 PF08876 Domain of unknown function (DUF1836) AMR71_13320 PF00269 Small, acid-soluble spore proteins, alpha/beta type AMR71_13325 PF12791 Anti-sigma factor N-terminus AMR71_13330 PF04542 Sigma-70 region 2 AMR71_13335 PF03741 Integral membrane protein TerC family AMR71_13340 PF09335 SNARE associated Golgi protein AMR71_13345 PF03707 Bacterial signalling protein N terminal repeat AMR71_13345 PF00563 EAL domain AMR71_13345 PF00990 Diguanylate cyclase, GGDEF domain AMR71_13350 PF01047 MarR family AMR71_13360 PF13411 MerR HTH family regulatory protein AMR71_13370 PF03466 LysR substrate binding domain AMR71_13370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMR71_13380 PF03448 MgtE intracellular N domain AMR71_13380 PF01769 Divalent cation transporter AMR71_13380 PF00571 CBS domain AMR71_13390 PF03413 Peptidase propeptide and YPEB domain AMR71_13395 PF03413 Peptidase propeptide and YPEB domain AMR71_13400 PF00512 His Kinase A (phospho-acceptor) domain AMR71_13400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMR71_13400 PF00672 HAMP domain AMR71_13405 PF00486 Transcriptional regulatory protein, C terminal AMR71_13405 PF00072 Response regulator receiver domain AMR71_13420 PF00082 Subtilase family AMR71_13425 PF08267 Cobalamin-independent synthase, N-terminal domain AMR71_13425 PF01717 Cobalamin-independent synthase, Catalytic domain AMR71_13430 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMR71_13435 PF02566 OsmC-like protein AMR71_13440 PF01047 MarR family AMR71_13445 PF02566 OsmC-like protein AMR71_13455 PF18801 response regulator aspartate phosphatase H, N terminal AMR71_13460 PF00171 Aldehyde dehydrogenase family AMR71_13465 PF00696 Amino acid kinase family AMR71_13465 PF01472 PUA domain AMR71_13470 PF00551 Formyl transferase AMR71_13470 PF01842 ACT domain AMR71_13480 PF00893 Small Multidrug Resistance protein AMR71_13485 PF00893 Small Multidrug Resistance protein AMR71_13490 PF12833 Helix-turn-helix domain AMR71_13490 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AMR71_13490 PF02805 Metal binding domain of Ada AMR71_13490 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AMR71_13495 PF13302 Acetyltransferase (GNAT) domain AMR71_13510 PF03551 Transcriptional regulator PadR-like family AMR71_13515 PF03061 Thioesterase superfamily AMR71_13525 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMR71_13525 PF00005 ABC transporter AMR71_13530 PF00877 NlpC/P60 family AMR71_13535 PF13378 Enolase C-terminal domain-like AMR71_13535 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMR71_13540 PF02016 LD-carboxypeptidase N-terminal domain AMR71_13540 PF17676 LD-carboxypeptidase C-terminal domain AMR71_13545 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMR71_13550 PF00005 ABC transporter AMR71_13550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMR71_13555 PF12911 N-terminal TM domain of oligopeptide transport permease C AMR71_13555 PF00528 Binding-protein-dependent transport system inner membrane component AMR71_13560 PF00528 Binding-protein-dependent transport system inner membrane component AMR71_13565 PF04951 D-aminopeptidase AMR71_13570 PF14748 Pyrroline-5-carboxylate reductase dimerisation AMR71_13570 PF03807 NADP oxidoreductase coenzyme F420-dependent AMR71_13575 PF13180 PDZ domain AMR71_13580 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMR71_13585 PF13520 Amino acid permease AMR71_13595 PF04198 Putative sugar-binding domain AMR71_13610 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMR71_13610 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMR71_13615 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMR71_13615 PF02817 e3 binding domain AMR71_13615 PF00364 Biotin-requiring enzyme AMR71_13620 PF00364 Biotin-requiring enzyme AMR71_13620 PF02780 Transketolase, C-terminal domain AMR71_13620 PF02779 Transketolase, pyrimidine binding domain AMR71_13625 PF00676 Dehydrogenase E1 component AMR71_13630 PF08240 Alcohol dehydrogenase GroES-like domain AMR71_13630 PF00107 Zinc-binding dehydrogenase AMR71_13645 PF03611 PTS system sugar-specific permease component AMR71_13660 PF00528 Binding-protein-dependent transport system inner membrane component AMR71_13665 PF00528 Binding-protein-dependent transport system inner membrane component AMR71_13685 PF01865 Protein of unknown function DUF47 AMR71_13690 PF01384 Phosphate transporter family AMR71_13695 PF14171 Toxin SpoIISA, type II toxin-antitoxin system AMR71_13700 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system AMR71_13705 PF01510 N-acetylmuramoyl-L-alanine amidase AMR71_13705 PF01476 LysM domain AMR71_13705 PF01471 Putative peptidoglycan binding domain AMR71_13715 PF06114 IrrE N-terminal-like domain AMR71_13720 PF05908 Poly-gamma-glutamate hydrolase AMR71_13735 PF01494 FAD binding domain AMR71_13740 PF00669 Bacterial flagellin N-terminal helical region AMR71_13740 PF00700 Bacterial flagellin C-terminal helical region AMR71_13745 PF00700 Bacterial flagellin C-terminal helical region AMR71_13745 PF00669 Bacterial flagellin N-terminal helical region AMR71_13750 PF00700 Bacterial flagellin C-terminal helical region AMR71_13750 PF00669 Bacterial flagellin N-terminal helical region AMR71_13755 PF00669 Bacterial flagellin N-terminal helical region AMR71_13755 PF00700 Bacterial flagellin C-terminal helical region AMR71_13765 PF00440 Bacterial regulatory proteins, tetR family AMR71_13770 PF08240 Alcohol dehydrogenase GroES-like domain AMR71_13770 PF00107 Zinc-binding dehydrogenase AMR71_13775 PF00842 Alanine racemase, C-terminal domain AMR71_13775 PF01168 Alanine racemase, N-terminal domain AMR71_13805 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMR71_13805 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMR71_13810 PF07690 Major Facilitator Superfamily AMR71_13815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMR71_13815 PF03466 LysR substrate binding domain AMR71_13830 PF01177 Asp/Glu/Hydantoin racemase AMR71_13835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMR71_13835 PF03466 LysR substrate binding domain AMR71_13845 PF10852 Protein of unknown function (DUF2651) AMR71_13860 PF18801 response regulator aspartate phosphatase H, N terminal AMR71_13860 PF13176 Tetratricopeptide repeat AMR71_13865 PF00302 Chloramphenicol acetyltransferase AMR71_13875 PF13673 Acetyltransferase (GNAT) domain AMR71_13880 PF13176 Tetratricopeptide repeat AMR71_13880 PF18801 response regulator aspartate phosphatase H, N terminal AMR71_13890 PF03466 LysR substrate binding domain AMR71_13890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMR71_13895 PF00701 Dihydrodipicolinate synthetase family AMR71_13900 PF07690 Major Facilitator Superfamily AMR71_13920 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AMR71_13925 PF00490 Delta-aminolevulinic acid dehydratase AMR71_14060 PF01053 Cys/Met metabolism PLP-dependent enzyme AMR71_14065 PF01053 Cys/Met metabolism PLP-dependent enzyme AMR71_14070 PF00756 Putative esterase AMR71_14080 PF13673 Acetyltransferase (GNAT) domain AMR71_14090 PF13361 UvrD-like helicase C-terminal domain AMR71_14090 PF00580 UvrD/REP helicase N-terminal domain AMR71_14095 PF14069 Stage VI sporulation protein F AMR71_14105 PF07098 Protein of unknown function (DUF1360) AMR71_14110 PF07552 Spore Coat Protein X and V domain AMR71_14120 PF07552 Spore Coat Protein X and V domain AMR71_14125 PF10612 Spore coat protein Z AMR71_14130 PF10612 Spore coat protein Z AMR71_14135 PF14153 Spore coat protein CotO AMR71_14145 PF08543 Phosphomethylpyrimidine kinase AMR71_14150 PF00899 ThiF family AMR71_14155 PF05690 Thiazole biosynthesis protein ThiG AMR71_14160 PF02597 ThiS family AMR71_14165 PF01266 FAD dependent oxidoreductase AMR71_14170 PF02581 Thiamine monophosphate synthase AMR71_14175 PF03070 TENA/THI-4/PQQC family AMR71_14180 PF02254 TrkA-N domain AMR71_14180 PF00999 Sodium/hydrogen exchanger family AMR71_14180 PF02080 TrkA-C domain AMR71_14185 PF00149 Calcineurin-like phosphoesterase AMR71_14190 PF00849 RNA pseudouridylate synthase AMR71_14195 PF01513 ATP-NAD kinase AMR71_14200 PF04607 Region found in RelA / SpoT proteins AMR71_14210 PF01928 CYTH domain AMR71_14215 PF01464 Transglycosylase SLT domain AMR71_14220 PF01152 Bacterial-like globin AMR71_14230 PF08439 Oligopeptidase F AMR71_14230 PF01432 Peptidase family M3 AMR71_14240 PF13396 Phospholipase_D-nuclease N-terminal AMR71_14240 PF13091 PLD-like domain AMR71_14245 PF05389 Negative regulator of genetic competence (MecA) AMR71_14250 PF03741 Integral membrane protein TerC family AMR71_14255 PF03960 ArsC family AMR71_14260 PF13508 Acetyltransferase (GNAT) domain AMR71_14270 PF00005 ABC transporter AMR71_14270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMR71_14275 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMR71_14275 PF00005 ABC transporter AMR71_14280 PF12911 N-terminal TM domain of oligopeptide transport permease C AMR71_14280 PF00528 Binding-protein-dependent transport system inner membrane component AMR71_14285 PF00528 Binding-protein-dependent transport system inner membrane component AMR71_14290 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMR71_14295 PF00579 tRNA synthetases class I (W and Y) AMR71_14300 PF12227 Protein of unknown function (DUF3603) AMR71_14305 PF00528 Binding-protein-dependent transport system inner membrane component AMR71_14305 PF12911 N-terminal TM domain of oligopeptide transport permease C AMR71_14310 PF00528 Binding-protein-dependent transport system inner membrane component AMR71_14315 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMR71_14320 PF00005 ABC transporter AMR71_14320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMR71_14325 PF00005 ABC transporter AMR71_14325 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMR71_14330 PF10026 Predicted Zn-dependent protease (DUF2268) AMR71_14335 PF00109 Beta-ketoacyl synthase, N-terminal domain AMR71_14335 PF02801 Beta-ketoacyl synthase, C-terminal domain AMR71_14340 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMR71_14340 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMR71_14350 PF10815 ComZ AMR71_14355 PF02608 ABC transporter substrate-binding protein PnrA-like AMR71_14370 PF11151 Protein of unknown function (DUF2929) AMR71_14375 PF07690 Major Facilitator Superfamily AMR71_14380 PF14168 YjzC-like protein AMR71_14385 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMR71_14385 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMR71_14390 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AMR71_14390 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMR71_14395 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AMR71_14395 PF00117 Glutamine amidotransferase class-I AMR71_14400 PF00202 Aminotransferase class-III AMR71_14405 PF00696 Amino acid kinase family AMR71_14410 PF01960 ArgJ family AMR71_14415 PF02774 Semialdehyde dehydrogenase, dimerisation domain AMR71_14415 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMR71_14420 PF07690 Major Facilitator Superfamily AMR71_14425 PF01565 FAD binding domain AMR71_14430 PF01883 Iron-sulfur cluster assembly protein AMR71_14435 PF00326 Prolyl oligopeptidase family AMR71_14450 PF12758 Protein of unknown function (DUF3813) AMR71_14455 PF12690 Intracellular proteinase inhibitor AMR71_14460 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AMR71_14460 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AMR71_14465 PF02645 Uncharacterised protein, DegV family COG1307 AMR71_14470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMR71_14470 PF02743 Cache domain AMR71_14470 PF00672 HAMP domain AMR71_14480 PF17783 CvfB-like winged helix domain AMR71_14480 PF13509 S1 domain AMR71_14485 PF04461 Protein of unknown function (DUF520) AMR71_14490 PF02574 Homocysteine S-methyltransferase AMR71_14490 PF02219 Methylenetetrahydrofolate reductase AMR71_14495 PF02607 B12 binding domain AMR71_14495 PF02965 Vitamin B12 dependent methionine synthase, activation domain AMR71_14495 PF00809 Pterin binding enzyme AMR71_14495 PF02574 Homocysteine S-methyltransferase AMR71_14495 PF02310 B12 binding domain AMR71_14510 PF04183 IucA / IucC family AMR71_14510 PF06276 Ferric iron reductase FhuF-like transporter AMR71_14515 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AMR71_14525 PF06276 Ferric iron reductase FhuF-like transporter AMR71_14525 PF04183 IucA / IucC family AMR71_14530 PF00282 Pyridoxal-dependent decarboxylase conserved domain AMR71_14535 PF00202 Aminotransferase class-III AMR71_14555 PF12833 Helix-turn-helix domain AMR71_14555 PF02311 AraC-like ligand binding domain AMR71_14560 PF01554 MatE AMR71_14575 PF01593 Flavin containing amine oxidoreductase AMR71_14580 PF13537 Glutamine amidotransferase domain AMR71_14580 PF00733 Asparagine synthase AMR71_14585 PF10949 Protein of unknown function (DUF2777) AMR71_14590 PF07457 Protein of unknown function (DUF1516) AMR71_14595 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMR71_14610 PF08757 CotH kinase protein AMR71_14620 PF10676 Spore germination protein gerPA/gerPF AMR71_14625 PF10803 Spore germination GerPB AMR71_14630 PF10737 Spore germination protein GerPC AMR71_14640 PF10970 Spore germination protein GerPE AMR71_14645 PF10676 Spore germination protein gerPA/gerPF AMR71_14655 PF13476 AAA domain AMR71_14660 PF12320 Type 5 capsule protein repressor C-terminal domain AMR71_14660 PF00149 Calcineurin-like phosphoesterase AMR71_14665 PF13361 UvrD-like helicase C-terminal domain AMR71_14665 PF00580 UvrD/REP helicase N-terminal domain AMR71_14665 PF12705 PD-(D/E)XK nuclease superfamily AMR71_14670 PF12705 PD-(D/E)XK nuclease superfamily AMR71_14675 PF02915 Rubrerythrin AMR71_14680 PF07681 DoxX AMR71_14695 PF05145 Transition state regulatory protein AbrB AMR71_14700 PF10502 Signal peptidase, peptidase S26 AMR71_14705 PF09335 SNARE associated Golgi protein AMR71_14720 PF03816 Cell envelope-related transcriptional attenuator domain AMR71_14725 PF01497 Periplasmic binding protein AMR71_14730 PF00005 ABC transporter AMR71_14735 PF01032 FecCD transport family AMR71_14740 PF01032 FecCD transport family AMR71_14745 PF01337 Barstar (barnase inhibitor) AMR71_14750 PF07690 Major Facilitator Superfamily AMR71_14755 PF00392 Bacterial regulatory proteins, gntR family AMR71_14755 PF00155 Aminotransferase class I and II AMR71_14765 PF14031 Putative serine dehydratase domain AMR71_14765 PF01168 Alanine racemase, N-terminal domain AMR71_14770 PF06338 ComK protein AMR71_14775 PF08858 IDEAL domain AMR71_14785 PF01266 FAD dependent oxidoreductase AMR71_14785 PF00355 Rieske [2Fe-2S] domain AMR71_14790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMR71_14795 PF00300 Histidine phosphatase superfamily (branch 1) AMR71_14800 PF05922 Peptidase inhibitor I9 AMR71_14800 PF00082 Subtilase family AMR71_14805 PF01435 Peptidase family M48 AMR71_14805 PF16491 CAAX prenyl protease N-terminal, five membrane helices AMR71_14815 PF13193 AMP-binding enzyme C-terminal domain AMR71_14815 PF00501 AMP-binding enzyme AMR71_14820 PF10437 Bacterial lipoate protein ligase C-terminus AMR71_14820 PF03099 Biotin/lipoate A/B protein ligase family AMR71_14825 PF12706 Beta-lactamase superfamily domain AMR71_14830 PF00375 Sodium:dicarboxylate symporter family AMR71_14835 PF05343 M42 glutamyl aminopeptidase AMR71_14845 PF00440 Bacterial regulatory proteins, tetR family AMR71_14845 PF17932 Tetracyclin repressor-like, C-terminal domain AMR71_14860 PF01208 Uroporphyrinogen decarboxylase (URO-D) AMR71_14865 PF00905 Penicillin binding protein transpeptidase domain AMR71_14865 PF00912 Transglycosylase AMR71_14870 PF03992 Antibiotic biosynthesis monooxygenase AMR71_14880 PF01546 Peptidase family M20/M25/M40 AMR71_14880 PF07687 Peptidase dimerisation domain AMR71_14885 PF12787 EcsC protein family AMR71_14890 PF05975 Bacterial ABC transporter protein EcsB AMR71_14895 PF00005 ABC transporter AMR71_14900 PF01230 HIT domain AMR71_14905 PF00266 Aminotransferase class-V AMR71_14910 PF17099 Tryptophan transporter TrpP AMR71_14920 PF12732 YtxH-like protein AMR71_14925 PF01047 MarR family AMR71_14930 PF08963 Protein of unknown function (DUF1878) AMR71_14935 PF11667 Putative zincin peptidase AMR71_14940 PF09680 Family of unknown function AMR71_14950 PF14147 Sporulation protein YhaL AMR71_14955 PF01966 HD domain AMR71_14960 PF13514 AAA domain AMR71_14965 PF00149 Calcineurin-like phosphoesterase AMR71_14970 PF14120 YhzD-like protein AMR71_14975 PF00378 Enoyl-CoA hydratase/isomerase AMR71_14985 PF02080 TrkA-C domain AMR71_14990 PF00999 Sodium/hydrogen exchanger family AMR71_14995 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AMR71_15000 PF04055 Radical SAM superfamily AMR71_15010 PF06133 Control of competence regulator ComK, YlbF/YmcA AMR71_15015 PF04286 Protein of unknown function (DUF445) AMR71_15020 PF14398 YheC/D like ATP-grasp AMR71_15025 PF14398 YheC/D like ATP-grasp AMR71_15030 PF17277 Family of unknown function (DUF5342) AMR71_15035 PF13556 PucR C-terminal helix-turn-helix domain AMR71_15040 PF03459 TOBE domain AMR71_15040 PF17912 MalK OB fold domain AMR71_15040 PF00005 ABC transporter AMR71_15045 PF00269 Small, acid-soluble spore proteins, alpha/beta type AMR71_15050 PF13460 NAD(P)H-binding AMR71_15055 PF00664 ABC transporter transmembrane region AMR71_15055 PF00005 ABC transporter AMR71_15060 PF00664 ABC transporter transmembrane region AMR71_15060 PF00005 ABC transporter AMR71_15065 PF00582 Universal stress protein family AMR71_15070 PF01063 Amino-transferase class IV AMR71_15075 PF01522 Polysaccharide deacetylase AMR71_15080 PF02146 Sir2 family AMR71_15085 PF00924 Mechanosensitive ion channel AMR71_15090 PF03009 Glycerophosphoryl diester phosphodiesterase family AMR71_15095 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AMR71_15100 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AMR71_15110 PF00571 CBS domain AMR71_15110 PF03471 Transporter associated domain AMR71_15110 PF01595 Cyclin M transmembrane N-terminal domain AMR71_15115 PF13411 MerR HTH family regulatory protein AMR71_15120 PF03471 Transporter associated domain AMR71_15120 PF01595 Cyclin M transmembrane N-terminal domain AMR71_15120 PF00571 CBS domain AMR71_15125 PF01553 Acyltransferase AMR71_15130 PF08281 Sigma-70, region 4 AMR71_15130 PF04542 Sigma-70 region 2 AMR71_15135 PF13791 Sigma factor regulator C-terminal AMR71_15135 PF13800 Sigma factor regulator N-terminal AMR71_15140 PF17453 Sigma-M inhibitor AMR71_15145 PF13520 Amino acid permease AMR71_15150 PF00877 NlpC/P60 family AMR71_15150 PF01476 LysM domain AMR71_15155 PF00245 Alkaline phosphatase AMR71_15160 PF04293 SpoVR like protein AMR71_15165 PF00970 Oxidoreductase FAD-binding domain AMR71_15165 PF00042 Globin AMR71_15165 PF00175 Oxidoreductase NAD-binding domain AMR71_15170 PF02082 Transcriptional regulator AMR71_15175 PF06628 Catalase-related immune-responsive AMR71_15175 PF00199 Catalase AMR71_15180 PF13028 Protein of unknown function (DUF3889) AMR71_15185 PF14148 YhdB-like protein AMR71_15190 PF00072 Response regulator receiver domain AMR71_15190 PF00196 Bacterial regulatory proteins, luxR family AMR71_15195 PF07730 Histidine kinase AMR71_15195 PF13185 GAF domain AMR71_15200 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMR71_15200 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMR71_15200 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMR71_15200 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMR71_15205 PF01266 FAD dependent oxidoreductase AMR71_15205 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AMR71_15210 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMR71_15210 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMR71_15215 PF00230 Major intrinsic protein AMR71_15220 PF04309 Glycerol-3-phosphate responsive antiterminator AMR71_15225 PF00202 Aminotransferase class-III AMR71_15230 PF05651 Putative sugar diacid recognition AMR71_15230 PF13556 PucR C-terminal helix-turn-helix domain AMR71_15230 PF17853 GGDEF-like domain AMR71_15250 PF00583 Acetyltransferase (GNAT) family AMR71_15250 PF00795 Carbon-nitrogen hydrolase AMR71_15255 PF13419 Haloacid dehalogenase-like hydrolase AMR71_15265 PF00849 RNA pseudouridylate synthase AMR71_15265 PF01479 S4 domain AMR71_15270 PF04203 Sortase domain AMR71_15275 PF00565 Staphylococcal nuclease homologue AMR71_15275 PF00149 Calcineurin-like phosphoesterase AMR71_15275 PF00746 LPXTG cell wall anchor motif AMR71_15275 PF02872 5'-nucleotidase, C-terminal domain AMR71_15280 PF00989 PAS fold AMR71_15280 PF00512 His Kinase A (phospho-acceptor) domain AMR71_15280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMR71_15280 PF13426 PAS domain AMR71_15280 PF13188 PAS domain AMR71_15285 PF07875 Coat F domain AMR71_15295 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) AMR71_15310 PF07694 5TMR of 5TMR-LYT AMR71_15310 PF00990 Diguanylate cyclase, GGDEF domain AMR71_15315 PF00313 'Cold-shock' DNA-binding domain AMR71_15325 PF03358 NADPH-dependent FMN reductase AMR71_15330 PF07690 Major Facilitator Superfamily AMR71_15340 PF04285 Protein of unknown function (DUF444) AMR71_15345 PF06798 PrkA serine protein kinase C-terminal domain AMR71_15345 PF08298 PrkA AAA domain AMR71_15350 PF00588 SpoU rRNA Methylase family AMR71_15355 PF12671 Putative amidase domain AMR71_15360 PF08331 Domain of unknown function (DUF1730) AMR71_15395 PF00005 ABC transporter AMR71_15405 PF00296 Luciferase-like monooxygenase AMR71_15410 PF00528 Binding-protein-dependent transport system inner membrane component AMR71_15415 PF09084 NMT1/THI5 like AMR71_15420 PF00005 ABC transporter AMR71_15430 PF01053 Cys/Met metabolism PLP-dependent enzyme AMR71_15435 PF10502 Signal peptidase, peptidase S26 AMR71_15440 PF00884 Sulfatase AMR71_15585 PF14540 Nucleotidyltransferase-like AMR71_15585 PF18576 Helix-turn-helix domain AMR71_15590 PF11023 Zinc-ribbon containing domain AMR71_15595 PF01475 Ferric uptake regulator family AMR71_15600 PF00578 AhpC/TSA family AMR71_15605 PF00202 Aminotransferase class-III AMR71_15610 PF06081 Aromatic acid exporter family member 1 AMR71_15625 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMR71_15630 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMR71_15630 PF00005 ABC transporter AMR71_15635 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMR71_15635 PF00005 ABC transporter AMR71_15640 PF00664 ABC transporter transmembrane region AMR71_15640 PF00005 ABC transporter AMR71_15645 PF04167 Protein of unknown function (DUF402) AMR71_15655 PF04259 Small, acid-soluble spore protein, gamma-type AMR71_15670 PF00730 HhH-GPD superfamily base excision DNA repair protein AMR71_15670 PF14815 NUDIX domain AMR71_15675 PF04307 LexA-binding, inner membrane-associated putative hydrolase AMR71_15685 PF04545 Sigma-70, region 4 AMR71_15690 PF00190 Cupin AMR71_15705 PF01494 FAD binding domain AMR71_15710 PF09586 Bacterial membrane protein YfhO AMR71_15715 PF00535 Glycosyl transferase family 2 AMR71_15720 PF14043 WVELL protein AMR71_15725 PF08176 Small acid-soluble spore protein K family AMR71_15730 PF08838 Protein of unknown function (DUF1811) AMR71_15735 PF02631 RecX family AMR71_15740 PF08338 Domain of unknown function (DUF1731) AMR71_15740 PF01370 NAD dependent epimerase/dehydratase family AMR71_15750 PF00881 Nitroreductase family AMR71_15755 PF18801 response regulator aspartate phosphatase H, N terminal AMR71_15770 PF03706 Lysylphosphatidylglycerol synthase TM region AMR71_15770 PF09924 Uncharacterised conserved protein (DUF2156) AMR71_15775 PF01047 MarR family AMR71_15785 PF12867 DinB superfamily AMR71_15790 PF08240 Alcohol dehydrogenase GroES-like domain AMR71_15790 PF00107 Zinc-binding dehydrogenase AMR71_15805 PF04542 Sigma-70 region 2 AMR71_15805 PF04545 Sigma-70, region 4 AMR71_15810 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AMR71_15815 PF00005 ABC transporter AMR71_15815 PF00664 ABC transporter transmembrane region AMR71_15820 PF01497 Periplasmic binding protein AMR71_15825 PF02805 Metal binding domain of Ada AMR71_15825 PF12833 Helix-turn-helix domain AMR71_15830 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMR71_15835 PF00657 GDSL-like Lipase/Acylhydrolase AMR71_15850 PF00440 Bacterial regulatory proteins, tetR family AMR71_15850 PF17934 Tetracyclin repressor-like, C-terminal domain AMR71_15855 PF00893 Small Multidrug Resistance protein AMR71_15860 PF00893 Small Multidrug Resistance protein AMR71_15915 PF07690 Major Facilitator Superfamily AMR71_15920 PF07739 TipAS antibiotic-recognition domain AMR71_15920 PF13411 MerR HTH family regulatory protein AMR71_15925 PF02627 Carboxymuconolactone decarboxylase family AMR71_15930 PF14552 Tautomerase enzyme AMR71_15935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMR71_15935 PF03466 LysR substrate binding domain AMR71_15950 PF05958 tRNA (Uracil-5-)-methyltransferase AMR71_15950 PF01938 TRAM domain AMR71_15955 PF00730 HhH-GPD superfamily base excision DNA repair protein AMR71_15965 PF01544 CorA-like Mg2+ transporter protein AMR71_15975 PF01522 Polysaccharide deacetylase AMR71_15985 PF08756 YfkB-like domain AMR71_15985 PF04055 Radical SAM superfamily AMR71_15990 PF00924 Mechanosensitive ion channel AMR71_16000 PF01709 Transcriptional regulator AMR71_16005 PF14167 YfkD-like protein AMR71_16010 PF01699 Sodium/calcium exchanger protein AMR71_16020 PF07690 Major Facilitator Superfamily AMR71_16025 PF03631 Virulence factor BrkB AMR71_16035 PF01451 Low molecular weight phosphotyrosine protein phosphatase AMR71_16040 PF01235 Sodium:alanine symporter family AMR71_16045 PF06569 Protein of unknown function (DUF1128) AMR71_16050 PF01965 DJ-1/PfpI family AMR71_16055 PF00149 Calcineurin-like phosphoesterase AMR71_16055 PF02872 5'-nucleotidase, C-terminal domain AMR71_16065 PF00392 Bacterial regulatory proteins, gntR family AMR71_16065 PF07702 UTRA domain AMR71_16070 PF00128 Alpha amylase, catalytic domain AMR71_16070 PF16657 Maltogenic Amylase, C-terminal domain AMR71_16075 PF02378 Phosphotransferase system, EIIC AMR71_16075 PF00367 phosphotransferase system, EIIB AMR71_16080 PF09350 Domain of unknown function (DUF1992) AMR71_16085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMR71_16085 PF00672 HAMP domain AMR71_16090 PF00282 Pyridoxal-dependent decarboxylase conserved domain AMR71_16095 PF00884 Sulfatase AMR71_16100 PF14172 Domain of unknown function (DUF4309) AMR71_16110 PF05675 Protein of unknown function (DUF817) AMR71_16115 PF00367 phosphotransferase system, EIIB AMR71_16115 PF02378 Phosphotransferase system, EIIC AMR71_16120 PF00557 Metallopeptidase family M24 AMR71_16125 PF03475 3-alpha domain AMR71_16125 PF03473 MOSC domain AMR71_16130 PF00708 Acylphosphatase AMR71_16140 PF02898 Nitric oxide synthase, oxygenase domain AMR71_16145 PF03551 Transcriptional regulator PadR-like family AMR71_16145 PF10400 Virulence activator alpha C-term AMR71_16150 PF05870 Phenolic acid decarboxylase (PAD) AMR71_16160 PF03600 Citrate transporter AMR71_16165 PF03401 Tripartite tricarboxylate transporter family receptor AMR71_16170 PF08279 HTH domain AMR71_16170 PF00072 Response regulator receiver domain AMR71_16170 PF12431 Transcriptional regulator AMR71_16175 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AMR71_16175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMR71_16185 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMR71_16185 PF01872 RibD C-terminal domain AMR71_16195 PF03781 Sulfatase-modifying factor enzyme 1 AMR71_16200 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AMR71_16200 PF00925 GTP cyclohydrolase II AMR71_16210 PF11181 Heat induced stress protein YflT AMR71_16215 PF11486 Protein of unknown function (DUF3212) AMR71_16220 PF00107 Zinc-binding dehydrogenase AMR71_16220 PF16884 N-terminal domain of oxidoreductase AMR71_16225 PF00271 Helicase conserved C-terminal domain AMR71_16225 PF00270 DEAD/DEAH box helicase AMR71_16230 PF12848 ABC transporter AMR71_16230 PF00005 ABC transporter AMR71_16235 PF07690 Major Facilitator Superfamily AMR71_16240 PF13411 MerR HTH family regulatory protein AMR71_16245 PF02649 Type I GTP cyclohydrolase folE2 AMR71_16250 PF12848 ABC transporter AMR71_16250 PF16326 ABC transporter C-terminal domain AMR71_16250 PF00005 ABC transporter AMR71_16255 PF00535 Glycosyl transferase family 2 AMR71_16255 PF13181 Tetratricopeptide repeat AMR71_16260 PF13520 Amino acid permease AMR71_16275 PF00011 Hsp20/alpha crystallin family AMR71_16290 PF00939 Sodium:sulfate symporter transmembrane region AMR71_16295 PF05223 NTF2-like N-terminal transpeptidase domain AMR71_16295 PF03717 Penicillin-binding Protein dimerisation domain AMR71_16295 PF00905 Penicillin binding protein transpeptidase domain AMR71_16300 PF07690 Major Facilitator Superfamily AMR71_16305 PF03407 Nucleotide-diphospho-sugar transferase AMR71_16310 PF00535 Glycosyl transferase family 2 AMR71_16315 PF03407 Nucleotide-diphospho-sugar transferase AMR71_16320 PF16363 GDP-mannose 4,6 dehydratase AMR71_16325 PF00483 Nucleotidyl transferase AMR71_16330 PF13037 Domain of unknown function (DUF3898) AMR71_16330 PF13039 Protein of unknown function (DUF3900) AMR71_16340 PF03466 LysR substrate binding domain AMR71_16340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMR71_16350 PF07690 Major Facilitator Superfamily AMR71_16355 PF01380 SIS domain AMR71_16355 PF01418 Helix-turn-helix domain, rpiR family AMR71_16360 PF02056 Family 4 glycosyl hydrolase AMR71_16360 PF11975 Family 4 glycosyl hydrolase C-terminal domain AMR71_16365 PF13021 Domain of unknown function (DUF3885) AMR71_16375 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMR71_16380 PF02082 Transcriptional regulator AMR71_16395 PF01207 Dihydrouridine synthase (Dus) AMR71_16400 PF04740 LXG domain of WXG superfamily AMR71_16400 PF14449 Pre-toxin TG AMR71_16410 PF01938 TRAM domain AMR71_16410 PF05958 tRNA (Uracil-5-)-methyltransferase AMR71_16415 PF00781 Diacylglycerol kinase catalytic domain AMR71_16420 PF01156 Inosine-uridine preferring nucleoside hydrolase AMR71_16425 PF00873 AcrB/AcrD/AcrF family AMR71_16430 PF00440 Bacterial regulatory proteins, tetR family AMR71_16435 PF02637 GatB domain AMR71_16435 PF02934 GatB/GatE catalytic domain AMR71_16440 PF01425 Amidase AMR71_16445 PF02686 Glu-tRNAGln amidotransferase C subunit AMR71_16450 PF00474 Sodium:solute symporter family AMR71_16455 PF02308 MgtC family AMR71_16460 PF01636 Phosphotransferase enzyme family AMR71_16465 PF07537 CamS sex pheromone cAM373 precursor AMR71_16470 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AMR71_16470 PF03120 NAD-dependent DNA ligase OB-fold domain AMR71_16470 PF12826 Helix-hairpin-helix motif AMR71_16470 PF01653 NAD-dependent DNA ligase adenylation domain AMR71_16470 PF00533 BRCA1 C Terminus (BRCT) domain AMR71_16475 PF13361 UvrD-like helicase C-terminal domain AMR71_16475 PF00580 UvrD/REP helicase N-terminal domain AMR71_16480 PF01884 PcrB family AMR71_16495 PF01645 Conserved region in glutamate synthase AMR71_16505 PF01371 Trp repressor protein AMR71_16510 PF01979 Amidohydrolase family AMR71_16510 PF13382 Adenine deaminase C-terminal domain AMR71_16515 PF11127 Protein of unknown function (DUF2892) AMR71_16520 PF07687 Peptidase dimerisation domain AMR71_16520 PF01546 Peptidase family M20/M25/M40 AMR71_16525 PF01144 Coenzyme A transferase AMR71_16530 PF01144 Coenzyme A transferase AMR71_16535 PF00202 Aminotransferase class-III AMR71_16555 PF02844 Phosphoribosylglycinamide synthetase, N domain AMR71_16555 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AMR71_16555 PF02843 Phosphoribosylglycinamide synthetase, C domain AMR71_16560 PF01808 AICARFT/IMPCHase bienzyme AMR71_16560 PF02142 MGS-like domain AMR71_16565 PF00551 Formyl transferase AMR71_16570 PF02769 AIR synthase related protein, C-terminal domain AMR71_16570 PF00586 AIR synthase related protein, N-terminal domain AMR71_16575 PF00156 Phosphoribosyl transferase domain AMR71_16580 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AMR71_16580 PF02769 AIR synthase related protein, C-terminal domain AMR71_16580 PF00586 AIR synthase related protein, N-terminal domain AMR71_16590 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase AMR71_16595 PF01259 SAICAR synthetase AMR71_16600 PF10397 Adenylosuccinate lyase C-terminus AMR71_16600 PF00206 Lyase AMR71_16605 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AMR71_16605 PF02222 ATP-grasp domain AMR71_16610 PF00731 AIR carboxylase AMR71_16615 PF14044 NETI protein AMR71_16620 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AMR71_16630 PF10055 Uncharacterized small protein (DUF2292) AMR71_16635 PF00860 Permease family AMR71_16640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMR71_16640 PF03466 LysR substrate binding domain AMR71_16645 PF07690 Major Facilitator Superfamily AMR71_16655 PF08281 Sigma-70, region 4 AMR71_16655 PF04542 Sigma-70 region 2 AMR71_16670 PF13302 Acetyltransferase (GNAT) domain AMR71_16675 PF04397 LytTr DNA-binding domain AMR71_16675 PF00072 Response regulator receiver domain AMR71_16700 PF12833 Helix-turn-helix domain AMR71_16705 PF08502 LeuA allosteric (dimerisation) domain AMR71_16705 PF00682 HMGL-like AMR71_16710 PF12833 Helix-turn-helix domain AMR71_16715 PF04073 Aminoacyl-tRNA editing domain AMR71_16725 PF00958 GMP synthase C terminal domain AMR71_16725 PF00117 Glutamine amidotransferase class-I AMR71_16725 PF02540 NAD synthase AMR71_16730 PF13559 Domain of unknown function (DUF4129) AMR71_16730 PF11992 Domain of unknown function (DUF3488) AMR71_16730 PF01841 Transglutaminase-like superfamily AMR71_16735 PF01882 Protein of unknown function DUF58 AMR71_16740 PF07726 ATPase family associated with various cellular activities (AAA) AMR71_16740 PF17863 AAA lid domain AMR71_16745 PF16916 Dimerisation domain of Zinc Transporter AMR71_16745 PF01545 Cation efflux family AMR71_16750 PF00324 Amino acid permease AMR71_16755 PF07732 Multicopper oxidase AMR71_16755 PF00394 Multicopper oxidase AMR71_16755 PF07731 Multicopper oxidase AMR71_16765 PF07676 WD40-like Beta Propeller Repeat AMR71_16770 PF03330 Lytic transglycolase AMR71_16795 PF02557 D-alanyl-D-alanine carboxypeptidase AMR71_16800 PF04299 Putative FMN-binding domain AMR71_16805 PF01047 MarR family AMR71_16810 PF02384 N-6 DNA Methylase AMR71_16815 PF07669 Eco57I restriction-modification methylase AMR71_16830 PF00118 TCP-1/cpn60 chaperonin family AMR71_16835 PF00166 Chaperonin 10 Kd subunit AMR71_16840 PF02517 CPBP intramembrane metalloprotease AMR71_16845 PF14146 Domain of unknown function (DUF4305) AMR71_16855 PF00902 Sec-independent protein translocase protein (TatC) AMR71_16860 PF02416 mttA/Hcf106 family AMR71_16865 PF06971 Putative DNA-binding protein N-terminus AMR71_16865 PF02629 CoA binding domain AMR71_16870 PF01967 MoaC family AMR71_16875 PF00005 ABC transporter AMR71_16875 PF16326 ABC transporter C-terminal domain AMR71_16875 PF12848 ABC transporter AMR71_16880 PF00814 Glycoprotease family AMR71_16885 PF00583 Acetyltransferase (GNAT) family AMR71_16890 PF00814 Glycoprotease family AMR71_16895 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AMR71_16900 PF02769 AIR synthase related protein, C-terminal domain AMR71_16900 PF00586 AIR synthase related protein, N-terminal domain AMR71_16950 PF00375 Sodium:dicarboxylate symporter family AMR71_16960 PF00892 EamA-like transporter family AMR71_16965 PF03591 AzlC protein AMR71_16975 PF01596 O-methyltransferase AMR71_16985 PF00583 Acetyltransferase (GNAT) family AMR71_16990 PF01810 LysE type translocator AMR71_16995 PF01381 Helix-turn-helix AMR71_16995 PF07883 Cupin domain AMR71_17010 PF00881 Nitroreductase family AMR71_17015 PF01047 MarR family AMR71_17020 PF01872 RibD C-terminal domain AMR71_17025 PF00440 Bacterial regulatory proteins, tetR family AMR71_17035 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMR71_17040 PF00583 Acetyltransferase (GNAT) family AMR71_17070 PF07690 Major Facilitator Superfamily AMR71_17075 PF00440 Bacterial regulatory proteins, tetR family AMR71_17075 PF16925 Tetracyclin repressor-like, C-terminal domain AMR71_17095 PF17763 Glutaminase/Asparaginase C-terminal domain AMR71_17095 PF00710 Asparaginase, N-terminal AMR71_17105 PF00106 short chain dehydrogenase AMR71_17120 PF07690 Major Facilitator Superfamily AMR71_17125 PF00440 Bacterial regulatory proteins, tetR family AMR71_17130 PF00722 Glycosyl hydrolases family 16 AMR71_17135 PF13411 MerR HTH family regulatory protein AMR71_17140 PF08240 Alcohol dehydrogenase GroES-like domain AMR71_17140 PF00107 Zinc-binding dehydrogenase AMR71_17145 PF02559 CarD-like/TRCF domain AMR71_17150 PF00313 'Cold-shock' DNA-binding domain AMR71_17205 PF10263 SprT-like family AMR71_17205 PF17283 SprT-like zinc ribbon domain AMR71_17210 PF09371 Tex-like protein N-terminal domain AMR71_17210 PF17674 HHH domain AMR71_17210 PF00575 S1 RNA binding domain AMR71_17210 PF16921 Tex protein YqgF-like domain AMR71_17215 PF07228 Stage II sporulation protein E (SpoIIE) AMR71_17220 PF04545 Sigma-70, region 4 AMR71_17220 PF04539 Sigma-70 region 3 AMR71_17220 PF04542 Sigma-70 region 2 AMR71_17225 PF13581 Histidine kinase-like ATPase domain AMR71_17230 PF01740 STAS domain AMR71_17235 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain AMR71_17235 PF07228 Stage II sporulation protein E (SpoIIE) AMR71_17240 PF13581 Histidine kinase-like ATPase domain AMR71_17245 PF01740 STAS domain AMR71_17250 PF08678 Rsbr N terminal AMR71_17250 PF01740 STAS domain AMR71_17255 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system AMR71_17260 PF01402 Ribbon-helix-helix protein, copG family AMR71_17265 PF01168 Alanine racemase, N-terminal domain AMR71_17265 PF00842 Alanine racemase, C-terminal domain AMR71_17275 PF01648 4'-phosphopantetheinyl transferase superfamily AMR71_17280 PF01694 Rhomboid family AMR71_17285 PF03703 Bacterial PH domain AMR71_17290 PF03703 Bacterial PH domain AMR71_17295 PF00270 DEAD/DEAH box helicase AMR71_17295 PF00271 Helicase conserved C-terminal domain AMR71_17305 PF12146 Serine aminopeptidase, S33 AMR71_17310 PF01225 Mur ligase family, catalytic domain AMR71_17310 PF02875 Mur ligase family, glutamate ligase domain AMR71_17310 PF08245 Mur ligase middle domain AMR71_17315 PF07478 D-ala D-ala ligase C-terminus AMR71_17315 PF01820 D-ala D-ala ligase N-terminus AMR71_17320 PF00085 Thioredoxin AMR71_17325 PF13040 Fur-regulated basic protein B AMR71_17340 PF00005 ABC transporter AMR71_17345 PF00375 Sodium:dicarboxylate symporter family AMR71_17350 PF01594 AI-2E family transporter AMR71_17355 PF00375 Sodium:dicarboxylate symporter family AMR71_17360 PF00072 Response regulator receiver domain AMR71_17360 PF08279 HTH domain AMR71_17365 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AMR71_17365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMR71_17365 PF17203 Single cache domain 3 AMR71_17370 PF03480 Bacterial extracellular solute-binding protein, family 7 AMR71_17375 PF12787 EcsC protein family AMR71_17380 PF04226 Transglycosylase associated protein AMR71_17385 PF01566 Natural resistance-associated macrophage protein AMR71_17390 PF13302 Acetyltransferase (GNAT) domain AMR71_17410 PF04740 LXG domain of WXG superfamily AMR71_17410 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues AMR71_17410 PF14449 Pre-toxin TG AMR71_17415 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMR71_17415 PF00205 Thiamine pyrophosphate enzyme, central domain AMR71_17415 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMR71_17420 PF13520 Amino acid permease AMR71_17425 PF03170 Bacterial cellulose synthase subunit AMR71_17435 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) AMR71_17440 PF00990 Diguanylate cyclase, GGDEF domain AMR71_17450 PF01751 Toprim domain AMR71_17450 PF01131 DNA topoisomerase AMR71_17455 PF12823 Domain of unknown function (DUF3817) AMR71_17475 PF16242 Pyridoxamine 5'-phosphate oxidase like AMR71_17485 PF13649 Methyltransferase domain AMR71_17490 PF05043 Mga helix-turn-helix domain AMR71_17490 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AMR71_17490 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AMR71_17490 PF00874 PRD domain AMR71_17490 PF08279 HTH domain AMR71_17500 PF13472 GDSL-like Lipase/Acylhydrolase family AMR71_17505 PF02525 Flavodoxin-like fold AMR71_17510 PF09339 IclR helix-turn-helix domain AMR71_17510 PF01614 Bacterial transcriptional regulator AMR71_17515 PF02626 Carboxyltransferase domain, subdomain A and B AMR71_17520 PF02682 Carboxyltransferase domain, subdomain C and D AMR71_17525 PF07286 Protein of unknown function (DUF1445) AMR71_17530 PF01566 Natural resistance-associated macrophage protein AMR71_17535 PF03746 LamB/YcsF family AMR71_17540 PF18801 response regulator aspartate phosphatase H, N terminal AMR71_17560 PF05901 Excalibur calcium-binding domain AMR71_17565 PF12681 Glyoxalase-like domain AMR71_17600 PF00672 HAMP domain AMR71_17600 PF02743 Cache domain AMR71_17600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMR71_17605 PF01232 Mannitol dehydrogenase Rossmann domain AMR71_17605 PF08125 Mannitol dehydrogenase C-terminal domain AMR71_17610 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AMR71_17615 PF02378 Phosphotransferase system, EIIC AMR71_17615 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AMR71_17620 PF13115 YtkA-like AMR71_17620 PF04234 CopC domain AMR71_17620 PF05425 Copper resistance protein D AMR71_17625 PF07987 Domain of unkown function (DUF1775) AMR71_17630 PF02525 Flavodoxin-like fold AMR71_17635 PF00171 Aldehyde dehydrogenase family AMR71_17640 PF13520 Amino acid permease AMR71_17645 PF00202 Aminotransferase class-III AMR71_17650 PF00155 Aminotransferase class I and II AMR71_17650 PF00392 Bacterial regulatory proteins, gntR family AMR71_17655 PF03466 LysR substrate binding domain AMR71_17655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMR71_17665 PF01022 Bacterial regulatory protein, arsR family AMR71_17675 PF00440 Bacterial regulatory proteins, tetR family AMR71_17680 PF07690 Major Facilitator Superfamily AMR71_17685 PF13840 ACT domain AMR71_17685 PF00696 Amino acid kinase family AMR71_17690 PF01740 STAS domain AMR71_17690 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain AMR71_17695 PF00672 HAMP domain AMR71_17695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMR71_17695 PF00512 His Kinase A (phospho-acceptor) domain AMR71_17700 PF00486 Transcriptional regulatory protein, C terminal AMR71_17700 PF00072 Response regulator receiver domain AMR71_17715 PF03972 MmgE/PrpD family AMR71_17725 PF00005 ABC transporter AMR71_17730 PF00528 Binding-protein-dependent transport system inner membrane component AMR71_17735 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMR71_17750 PF13229 Right handed beta helix region AMR71_17750 PF12708 Pectate lyase superfamily protein AMR71_17755 PF00854 POT family AMR71_17760 PF00324 Amino acid permease AMR71_17765 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMR71_17770 PF00528 Binding-protein-dependent transport system inner membrane component AMR71_17775 PF00005 ABC transporter AMR71_17785 PF01648 4'-phosphopantetheinyl transferase superfamily AMR71_17790 PF00155 Aminotransferase class I and II AMR71_17790 PF00392 Bacterial regulatory proteins, gntR family AMR71_17795 PF00892 EamA-like transporter family AMR71_17800 PF00975 Thioesterase domain AMR71_17805 PF00668 Condensation domain AMR71_17805 PF13193 AMP-binding enzyme C-terminal domain AMR71_17805 PF00501 AMP-binding enzyme AMR71_17805 PF00550 Phosphopantetheine attachment site AMR71_17810 PF13193 AMP-binding enzyme C-terminal domain AMR71_17810 PF00668 Condensation domain AMR71_17810 PF00501 AMP-binding enzyme AMR71_17810 PF00550 Phosphopantetheine attachment site AMR71_17815 PF00975 Thioesterase domain AMR71_17815 PF00550 Phosphopantetheine attachment site AMR71_17815 PF00668 Condensation domain AMR71_17815 PF00501 AMP-binding enzyme AMR71_17815 PF13193 AMP-binding enzyme C-terminal domain AMR71_17820 PF00550 Phosphopantetheine attachment site AMR71_17820 PF00668 Condensation domain AMR71_17820 PF13193 AMP-binding enzyme C-terminal domain AMR71_17820 PF00501 AMP-binding enzyme AMR71_17825 PF13193 AMP-binding enzyme C-terminal domain AMR71_17825 PF00668 Condensation domain AMR71_17825 PF00550 Phosphopantetheine attachment site AMR71_17825 PF00501 AMP-binding enzyme AMR71_17830 PF00528 Binding-protein-dependent transport system inner membrane component AMR71_17835 PF00528 Binding-protein-dependent transport system inner membrane component AMR71_17840 PF00005 ABC transporter AMR71_17840 PF08402 TOBE domain AMR71_17855 PF01968 Hydantoinase/oxoprolinase AMR71_17855 PF05378 Hydantoinase/oxoprolinase N-terminal region AMR71_17865 PF14040 Deoxyribonuclease NucA/NucB AMR71_17870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMR71_17870 PF17202 Single cache domain 3 AMR71_17870 PF00672 HAMP domain AMR71_17875 PF11033 Competence protein J (ComJ) AMR71_17880 PF02522 Aminoglycoside 3-N-acetyltransferase AMR71_17885 PF01037 Lrp/AsnC ligand binding domain AMR71_17890 PF12706 Beta-lactamase superfamily domain AMR71_17895 PF10925 Protein of unknown function (DUF2680) AMR71_17900 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMR71_17905 PF00528 Binding-protein-dependent transport system inner membrane component AMR71_17910 PF02040 Arsenical pump membrane protein AMR71_17915 PF17853 GGDEF-like domain AMR71_17915 PF13556 PucR C-terminal helix-turn-helix domain AMR71_17920 PF00171 Aldehyde dehydrogenase family AMR71_17925 PF01619 Proline dehydrogenase AMR71_17930 PF10127 RNA repair pathway DNA polymerase beta family AMR71_17940 PF05448 Acetyl xylan esterase (AXE1) AMR71_17945 PF00795 Carbon-nitrogen hydrolase AMR71_17950 PF03466 LysR substrate binding domain AMR71_17950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMR71_17955 PF08241 Methyltransferase domain AMR71_17960 PF01202 Shikimate kinase AMR71_17965 PF01614 Bacterial transcriptional regulator AMR71_17965 PF09339 IclR helix-turn-helix domain AMR71_17975 PF07690 Major Facilitator Superfamily AMR71_17980 PF02515 CoA-transferase family III AMR71_17990 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMR71_17990 PF00205 Thiamine pyrophosphate enzyme, central domain AMR71_17990 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMR71_17995 PF01487 Type I 3-dehydroquinase AMR71_18000 PF00171 Aldehyde dehydrogenase family AMR71_18010 PF02540 NAD synthase AMR71_18015 PF09347 Domain of unknown function (DUF1989) AMR71_18020 PF00324 Amino acid permease AMR71_18025 PF08892 YqcI/YcgG family AMR71_18030 PF10852 Protein of unknown function (DUF2651) AMR71_18040 PF01810 LysE type translocator AMR71_18045 PF07690 Major Facilitator Superfamily AMR71_18050 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMR71_18050 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMR71_18055 PF05116 Sucrose-6F-phosphate phosphohydrolase AMR71_18060 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMR71_18065 PF00356 Bacterial regulatory proteins, lacI family AMR71_18070 PF02652 L-lactate permease AMR71_18075 PF00056 lactate/malate dehydrogenase, NAD binding domain AMR71_18075 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AMR71_18080 PF03606 C4-dicarboxylate anaerobic carrier AMR71_18085 PF07687 Peptidase dimerisation domain AMR71_18085 PF01546 Peptidase family M20/M25/M40 AMR71_18100 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AMR71_18105 PF00528 Binding-protein-dependent transport system inner membrane component AMR71_18110 PF00571 CBS domain AMR71_18110 PF00005 ABC transporter AMR71_18115 PF05816 Toxic anion resistance protein (TelA) AMR71_18120 PF14266 Putative component of 'biosynthetic module' AMR71_18145 PF03741 Integral membrane protein TerC family AMR71_18150 PF02342 TerD domain AMR71_18155 PF02342 TerD domain AMR71_18160 PF02342 TerD domain AMR71_18165 PF00296 Luciferase-like monooxygenase AMR71_18180 PF07486 Cell Wall Hydrolase AMR71_18185 PF11611 Domain of unknown function (DUF4352) AMR71_18185 PF17118 Domain of unknown function (DUF5105) AMR71_18195 PF12679 ABC-2 family transporter protein AMR71_18200 PF00005 ABC transporter AMR71_18205 PF04397 LytTr DNA-binding domain AMR71_18205 PF00072 Response regulator receiver domain AMR71_18210 PF14501 GHKL domain AMR71_18215 PF00248 Aldo/keto reductase family AMR71_18225 PF07730 Histidine kinase AMR71_18230 PF00072 Response regulator receiver domain AMR71_18230 PF00196 Bacterial regulatory proteins, luxR family AMR71_18235 PF11611 Domain of unknown function (DUF4352) AMR71_18235 PF17118 Domain of unknown function (DUF5105) AMR71_18240 PF02810 SEC-C motif AMR71_18240 PF05225 helix-turn-helix, Psq domain AMR71_18245 PF08664 YcbB domain AMR71_18245 PF00072 Response regulator receiver domain AMR71_18250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMR71_18255 PF04960 Glutaminase AMR71_18260 PF01235 Sodium:alanine symporter family AMR71_18265 PF00561 alpha/beta hydrolase fold AMR71_18275 PF13520 Amino acid permease AMR71_18280 PF00501 AMP-binding enzyme AMR71_18280 PF13193 AMP-binding enzyme C-terminal domain AMR71_18285 PF01047 MarR family AMR71_18290 PF13823 Alcohol dehydrogenase GroES-associated AMR71_18290 PF00107 Zinc-binding dehydrogenase AMR71_18290 PF08240 Alcohol dehydrogenase GroES-like domain AMR71_18295 PF07883 Cupin domain AMR71_18300 PF00440 Bacterial regulatory proteins, tetR family AMR71_18305 PF01425 Amidase AMR71_18310 PF00082 Subtilase family AMR71_18330 PF07690 Major Facilitator Superfamily AMR71_18340 PF03551 Transcriptional regulator PadR-like family AMR71_18345 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AMR71_18345 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AMR71_18350 PF02574 Homocysteine S-methyltransferase AMR71_18355 PF00324 Amino acid permease AMR71_18365 PF17936 Bacterial Ig domain AMR71_18365 PF00082 Subtilase family AMR71_18375 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AMR71_18385 PF09261 Alpha mannosidase middle domain AMR71_18385 PF07748 Glycosyl hydrolases family 38 C-terminal domain AMR71_18385 PF01074 Glycosyl hydrolases family 38 N-terminal domain AMR71_18390 PF00480 ROK family AMR71_18395 PF05043 Mga helix-turn-helix domain AMR71_18395 PF00874 PRD domain AMR71_18395 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AMR71_18395 PF08279 HTH domain AMR71_18410 PF00232 Glycosyl hydrolase family 1 AMR71_18415 PF02378 Phosphotransferase system, EIIC AMR71_18415 PF00367 phosphotransferase system, EIIB AMR71_18415 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AMR71_18420 PF00874 PRD domain AMR71_18420 PF03123 CAT RNA binding domain AMR71_18430 PF13520 Amino acid permease AMR71_18440 PF00465 Iron-containing alcohol dehydrogenase AMR71_18445 PF00248 Aldo/keto reductase family AMR71_18455 PF04463 Protein of unknown function (DUF523) AMR71_18465 PF01047 MarR family AMR71_18480 PF07690 Major Facilitator Superfamily AMR71_18485 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMR71_18485 PF03129 Anticodon binding domain AMR71_18485 PF09180 Prolyl-tRNA synthetase, C-terminal AMR71_18490 PF01925 Sulfite exporter TauE/SafE AMR71_18495 PF01206 Sulfurtransferase TusA AMR71_18500 PF00753 Metallo-beta-lactamase superfamily AMR71_18500 PF00581 Rhodanese-like domain AMR71_18505 PF01206 Sulfurtransferase TusA AMR71_18505 PF00581 Rhodanese-like domain AMR71_18515 PF13686 DsrE/DsrF/DrsH-like family AMR71_18520 PF02583 Metal-sensitive transcriptional repressor AMR71_18545 PF02801 Beta-ketoacyl synthase, C-terminal domain AMR71_18545 PF00109 Beta-ketoacyl synthase, N-terminal domain AMR71_18550 PF03190 Protein of unknown function, DUF255 AMR71_18560 PF07690 Major Facilitator Superfamily AMR71_18565 PF03009 Glycerophosphoryl diester phosphodiesterase family AMR71_18570 PF00324 Amino acid permease AMR71_18585 PF00440 Bacterial regulatory proteins, tetR family AMR71_18585 PF17922 Tetracyclin repressor-like, C-terminal domain AMR71_18590 PF12833 Helix-turn-helix domain AMR71_18595 PF00561 alpha/beta hydrolase fold AMR71_18605 PF01381 Helix-turn-helix AMR71_18615 PF00005 ABC transporter AMR71_18625 PF04235 Protein of unknown function (DUF418) AMR71_18635 PF13905 Thioredoxin-like AMR71_18650 PF00005 ABC transporter AMR71_18655 PF02517 CPBP intramembrane metalloprotease AMR71_18660 PF13186 Iron-sulfur cluster-binding domain AMR71_18660 PF04055 Radical SAM superfamily AMR71_18675 PF10400 Virulence activator alpha C-term AMR71_18675 PF03551 Transcriptional regulator PadR-like family AMR71_18680 PF12704 MacB-like periplasmic core domain AMR71_18680 PF02687 FtsX-like permease family AMR71_18680 PF00005 ABC transporter AMR71_18685 PF00005 ABC transporter AMR71_18695 PF13732 Domain of unknown function (DUF4162) AMR71_18695 PF00005 ABC transporter AMR71_18705 PF02086 D12 class N6 adenine-specific DNA methyltransferase AMR71_18715 PF00512 His Kinase A (phospho-acceptor) domain AMR71_18715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMR71_18720 PF01380 SIS domain AMR71_18725 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMR71_18725 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMR71_18725 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMR71_18725 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMR71_18730 PF07949 YbbR-like protein AMR71_18735 PF02457 DisA bacterial checkpoint controller nucleotide-binding AMR71_18740 PF13490 Putative zinc-finger AMR71_18745 PF08281 Sigma-70, region 4 AMR71_18745 PF04542 Sigma-70 region 2 AMR71_18750 PF00491 Arginase family AMR71_18780 PF13580 SIS domain AMR71_18785 PF01418 Helix-turn-helix domain, rpiR family AMR71_18785 PF01380 SIS domain AMR71_18790 PF00367 phosphotransferase system, EIIB AMR71_18790 PF02378 Phosphotransferase system, EIIC AMR71_18795 PF00144 Beta-lactamase AMR71_18800 PF00933 Glycosyl hydrolase family 3 N terminal domain AMR71_18800 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMR71_18805 PF07075 Protein of unknown function (DUF1343) AMR71_18810 PF01758 Sodium Bile acid symporter family AMR71_18815 PF00916 Sulfate permease family AMR71_18815 PF01740 STAS domain AMR71_18820 PF00669 Bacterial flagellin N-terminal helical region AMR71_18820 PF00700 Bacterial flagellin C-terminal helical region AMR71_18860 PF01522 Polysaccharide deacetylase AMR71_18865 PF14089 KinB-signalling pathway activation in sporulation AMR71_18870 PF17898 Spore germination GerD central core domain AMR71_18875 PF10609 NUBPL iron-transfer P-loop NTPase AMR71_18880 PF01520 N-acetylmuramoyl-L-alanine amidase AMR71_18885 PF10730 Protein of unknown function (DUF2521) AMR71_18905 PF13302 Acetyltransferase (GNAT) domain AMR71_18910 PF00380 Ribosomal protein S9/S16 AMR71_18915 PF00572 Ribosomal protein L13 AMR71_18920 PF01416 tRNA pseudouridine synthase AMR71_18925 PF02361 Cobalt transport protein AMR71_18930 PF00005 ABC transporter AMR71_18935 PF00005 ABC transporter AMR71_18940 PF01196 Ribosomal protein L17 AMR71_18945 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AMR71_18945 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AMR71_18945 PF01000 RNA polymerase Rpb3/RpoA insert domain AMR71_18950 PF00411 Ribosomal protein S11 AMR71_18955 PF00416 Ribosomal protein S13/S18 AMR71_18960 PF00444 Ribosomal protein L36 AMR71_18965 PF01176 Translation initiation factor 1A / IF-1 AMR71_18970 PF00557 Metallopeptidase family M24 AMR71_18975 PF05191 Adenylate kinase, active site lid AMR71_18980 PF00344 SecY translocase AMR71_18985 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AMR71_18990 PF00327 Ribosomal protein L30p/L7e AMR71_18995 PF03719 Ribosomal protein S5, C-terminal domain AMR71_18995 PF00333 Ribosomal protein S5, N-terminal domain AMR71_19000 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AMR71_19005 PF00347 Ribosomal protein L6 AMR71_19010 PF00410 Ribosomal protein S8 AMR71_19015 PF00253 Ribosomal protein S14p/S29e AMR71_19020 PF00673 ribosomal L5P family C-terminus AMR71_19020 PF00281 Ribosomal protein L5 AMR71_19025 PF00467 KOW motif AMR71_19025 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AMR71_19030 PF00238 Ribosomal protein L14p/L23e AMR71_19035 PF00366 Ribosomal protein S17 AMR71_19040 PF00831 Ribosomal L29 protein AMR71_19045 PF00252 Ribosomal protein L16p/L10e AMR71_19050 PF07650 KH domain AMR71_19050 PF00189 Ribosomal protein S3, C-terminal domain AMR71_19055 PF00237 Ribosomal protein L22p/L17e AMR71_19060 PF00203 Ribosomal protein S19 AMR71_19065 PF03947 Ribosomal Proteins L2, C-terminal domain AMR71_19065 PF00181 Ribosomal Proteins L2, RNA binding domain AMR71_19070 PF00276 Ribosomal protein L23 AMR71_19075 PF00573 Ribosomal protein L4/L1 family AMR71_19080 PF00297 Ribosomal protein L3 AMR71_19085 PF00338 Ribosomal protein S10p/S20e AMR71_19090 PF12146 Serine aminopeptidase, S33 AMR71_19095 PF00009 Elongation factor Tu GTP binding domain AMR71_19095 PF03144 Elongation factor Tu domain 2 AMR71_19095 PF03143 Elongation factor Tu C-terminal domain AMR71_19100 PF00679 Elongation factor G C-terminus AMR71_19100 PF14492 Elongation Factor G, domain II AMR71_19100 PF00009 Elongation factor Tu GTP binding domain AMR71_19100 PF03764 Elongation factor G, domain IV AMR71_19100 PF03144 Elongation factor Tu domain 2 AMR71_19105 PF00177 Ribosomal protein S7p/S5e AMR71_19110 PF00164 Ribosomal protein S12/S23 AMR71_19115 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family AMR71_19120 PF05000 RNA polymerase Rpb1, domain 4 AMR71_19120 PF00623 RNA polymerase Rpb1, domain 2 AMR71_19120 PF04997 RNA polymerase Rpb1, domain 1 AMR71_19120 PF04998 RNA polymerase Rpb1, domain 5 AMR71_19120 PF04983 RNA polymerase Rpb1, domain 3 AMR71_19125 PF00562 RNA polymerase Rpb2, domain 6 AMR71_19125 PF04560 RNA polymerase Rpb2, domain 7 AMR71_19125 PF04561 RNA polymerase Rpb2, domain 2 AMR71_19125 PF04563 RNA polymerase beta subunit AMR71_19125 PF04565 RNA polymerase Rpb2, domain 3 AMR71_19125 PF10385 RNA polymerase beta subunit external 1 domain AMR71_19130 PF05175 Methyltransferase small domain AMR71_19135 PF16320 Ribosomal protein L7/L12 dimerisation domain AMR71_19135 PF00542 Ribosomal protein L7/L12 C-terminal domain AMR71_19140 PF00466 Ribosomal protein L10 AMR71_19145 PF00687 Ribosomal protein L1p/L10e family AMR71_19150 PF03946 Ribosomal protein L11, N-terminal domain AMR71_19150 PF00298 Ribosomal protein L11, RNA binding domain AMR71_19155 PF00467 KOW motif AMR71_19155 PF02357 Transcription termination factor nusG AMR71_19160 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AMR71_19165 PF08281 Sigma-70, region 4 AMR71_19165 PF04542 Sigma-70 region 2 AMR71_19170 PF05991 YacP-like NYN domain AMR71_19175 PF08032 RNA 2'-O ribose methyltransferase substrate binding AMR71_19175 PF00588 SpoU rRNA Methylase family AMR71_19180 PF00636 Ribonuclease III domain AMR71_19185 PF01406 tRNA synthetases class I (C) catalytic domain AMR71_19185 PF09190 DALR domain AMR71_19190 PF00132 Bacterial transferase hexapeptide (six repeats) AMR71_19190 PF06426 Serine acetyltransferase, N-terminal AMR71_19195 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMR71_19200 PF02542 YgbB family AMR71_19205 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AMR71_19215 PF02457 DisA bacterial checkpoint controller nucleotide-binding AMR71_19215 PF10635 DisA bacterial checkpoint controller linker region AMR71_19220 PF18073 Rubredoxin metal binding domain AMR71_19225 PF00004 ATPase family associated with various cellular activities (AAA) AMR71_19225 PF07724 AAA domain (Cdc48 subfamily) AMR71_19225 PF17871 AAA lid domain AMR71_19225 PF02861 Clp amino terminal domain, pathogenicity island component AMR71_19225 PF10431 C-terminal, D2-small domain, of ClpB protein AMR71_19230 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain AMR71_19235 PF02151 UvrB/uvrC motif AMR71_19240 PF17727 CtsR C-terminal dimerization domain AMR71_19240 PF05848 CtsR N-terminal HTH domain