BCA_0001 SM00382 ATPases associated with a variety of cellular activities BCA_0001 SM00760 Bacterial dnaA protein helix-turn-helix domain BCA_0002 SM00480 DNA polymerase III beta subunit BCA_0005 SM00387 Histidine kinase-like ATPases BCA_0005 SM00433 TopoisomeraseII BCA_0006 SM00434 DNA Topoisomerase IV BCA_0014 SM00116 Domain in cystathionine beta-synthase and other proteins. BCA_0014 SM01240 BCA_0014 BCA_0015 SM00936 Penicillin-binding protein 5, C-terminal domain BCA_0026 SM00382 ATPases associated with a variety of cellular activities BCA_0028 SM00493 BCA_0028 BCA_0046 SM00966 SpoVT / AbrB like domain BCA_0049 SM00493 BCA_0049 BCA_0050 SM00650 Ribosomal RNA adenine dimethylases BCA_0060 SM01400 BCA_0060 BCA_0063 SM00487 DEAD-like helicases superfamily BCA_0063 SM00490 helicase superfamily c-terminal domain BCA_0063 SM00982 BCA_0063 BCA_0063 SM01058 CarD-like/TRCF domain BCA_0064 SM00966 SpoVT / AbrB like domain BCA_0067 SM00363 S4 RNA-binding domain BCA_0071 SM00316 Ribosomal protein S1-like RNA-binding domain BCA_0074 SM00331 Sigma factor PP2C-like phosphatases BCA_0074 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BCA_0075 SM00977 TilS substrate C-terminal domain BCA_0077 SM00382 ATPases associated with a variety of cellular activities BCA_0085 SM00905 Dihydroneopterin aldolase BCA_0087 SM00530 Helix-turn-helix XRE-family like proteins BCA_0110 SM00382 ATPases associated with a variety of cellular activities BCA_0110 SM01086 C-terminal, D2-small domain, of ClpB protein BCA_0111 SM00382 ATPases associated with a variety of cellular activities BCA_0113 SM00670 Large family of predicted nucleotide-binding domains BCA_0118 SM00840 BCA_0118 BCA_0119 SM00535 Ribonuclease III family BCA_0120 SM00967 RNA 2'-O ribose methyltransferase substrate binding BCA_0122 SM00421 helix_turn_helix, Lux Regulon BCA_0124 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BCA_0125 SM00649 Ribosomal protein L11/L12 BCA_0132 SM00663 RNA polymerase I subunit A N-terminus BCA_0136 SM00838 Elongation factor G C-terminus BCA_0136 SM00889 Elongation factor G, domain IV BCA_0138 SM01403 BCA_0138 BCA_0142 SM01382 BCA_0142 BCA_0142 SM01383 BCA_0142 BCA_0145 SM00322 K homology RNA-binding domain BCA_0149 SM01374 BCA_0149 BCA_0150 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BCA_0162 SM00316 Ribosomal protein S1-like RNA-binding domain BCA_0166 SM00662 RNA polymerases D BCA_0168 SM00382 ATPases associated with a variety of cellular activities BCA_0169 SM00382 ATPases associated with a variety of cellular activities BCA_0176 SM00646 BCA_0176 BCA_0179 SM01251 BCA_0179 BCA_0204 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCA_0204 SM00895 BCA_0204 BCA_0207 SM01350 BCA_0207 BCA_0216 SM00382 ATPases associated with a variety of cellular activities BCA_0216 SM00930 BCA_0216 BCA_0219 SM00829 Enoylreductase BCA_0231 SM00382 ATPases associated with a variety of cellular activities BCA_0232 SM00382 ATPases associated with a variety of cellular activities BCA_0235 SM00342 helix_turn_helix, arabinose operon control protein BCA_0253 SM00563 Phosphate acyltransferases BCA_0254 SM00354 helix_turn _helix lactose operon repressor BCA_0266 SM00382 ATPases associated with a variety of cellular activities BCA_0272 SM00382 ATPases associated with a variety of cellular activities BCA_0273 SM00382 ATPases associated with a variety of cellular activities BCA_0284 SM00487 DEAD-like helicases superfamily BCA_0284 SM00490 helicase superfamily c-terminal domain BCA_0289 SM01005 Alanine racemase, C-terminal domain BCA_0292 SM00316 Ribosomal protein S1-like RNA-binding domain BCA_0292 SM00732 Likely ribonuclease with RNase H fold. BCA_0293 SM00731 SprT homologues. BCA_0315 SM00382 ATPases associated with a variety of cellular activities BCA_0316 SM00881 CoA binding domain BCA_0319 SM00883 Chaperonin 10 Kd subunit BCA_0322 SM00860 SMI1 / KNR4 family BCA_0327 SM00448 cheY-homologous receiver domain BCA_0327 SM00862 Transcriptional regulatory protein, C terminal BCA_0328 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCA_0328 SM00387 Histidine kinase-like ATPases BCA_0328 SM00388 His Kinase A (phosphoacceptor) domain BCA_0347 SM00382 ATPases associated with a variety of cellular activities BCA_0348 SM00387 Histidine kinase-like ATPases BCA_0348 SM00388 His Kinase A (phosphoacceptor) domain BCA_0349 SM00448 cheY-homologous receiver domain BCA_0349 SM00862 Transcriptional regulatory protein, C terminal BCA_0362 SM01001 AIR carboxylase BCA_0364 SM00998 Adenylosuccinate lyase C-terminus BCA_0367 SM01211 BCA_0367 BCA_0372 SM00798 AICARFT/IMPCHase bienzyme BCA_0372 SM00851 MGS-like domain BCA_0373 SM01209 BCA_0373 BCA_0373 SM01210 BCA_0373 BCA_0375 SM00244 prohibitin homologues BCA_0379 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BCA_0379 SM00292 breast cancer carboxy-terminal domain BCA_0379 SM00532 Ligase N family BCA_0386 SM00382 ATPases associated with a variety of cellular activities BCA_0386 SM00930 BCA_0386 BCA_0391 SM00347 helix_turn_helix multiple antibiotic resistance protein BCA_0395 SM00845 GatB domain BCA_0396 SM00046 Diacylglycerol kinase catalytic domain (presumed) BCA_0399 SM00382 ATPases associated with a variety of cellular activities BCA_0409 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BCA_0409 SM00387 Histidine kinase-like ATPases BCA_0409 SM00388 His Kinase A (phosphoacceptor) domain BCA_0413 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BCA_0422 SM01007 Class II Aldolase and Adducin N-terminal domain BCA_0444 SM00062 Bacterial periplasmic substrate-binding proteins BCA_0444 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BCA_0445 SM00382 ATPases associated with a variety of cellular activities BCA_0446 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BCA_0446 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCA_0447 SM00642 Alpha-amylase domain BCA_0452 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BCA_0452 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BCA_0452 SM00493 BCA_0452 BCA_0457 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BCA_0457 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCA_0462 SM00382 ATPases associated with a variety of cellular activities BCA_0464 SM00382 ATPases associated with a variety of cellular activities BCA_0465 SM00060 Fibronectin type 3 domain BCA_0465 SM00636 BCA_0465 BCA_0465 SM00637 BCA_0465 BCA_0472 SM00530 Helix-turn-helix XRE-family like proteins BCA_0477 SM00946 Prolyl-tRNA synthetase, C-terminal BCA_0486 SM00831 Cation transporter/ATPase, N-terminus BCA_0488 SM00226 Low molecular weight phosphatase family BCA_0506 SM00478 endonuclease III BCA_0510 SM00382 ATPases associated with a variety of cellular activities BCA_0515 SM00530 Helix-turn-helix XRE-family like proteins BCA_0525 SM00984 UDP binding domain BCA_0541 SM00478 endonuclease III BCA_0541 SM00525 BCA_0541 BCA_0547 SM00382 ATPases associated with a variety of cellular activities BCA_0551 SM00382 ATPases associated with a variety of cellular activities BCA_0583 SM00567 E-Z type HEAT repeats BCA_0586 SM00052 Putative diguanylate phosphodiesterase BCA_0586 SM00091 PAS domain BCA_0586 SM00267 diguanylate cyclase BCA_0587 SM00763 PrkA AAA domain BCA_0589 SM00365 Leucine-rich repeat, SDS22-like subfamily BCA_0589 SM00369 Leucine-rich repeats, typical (most populated) subfamily BCA_0589 SM00725 NEAr Transporter domain BCA_0591 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BCA_0593 SM00244 prohibitin homologues BCA_0594 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BCA_0594 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCA_0595 SM00387 Histidine kinase-like ATPases BCA_0596 SM00448 cheY-homologous receiver domain BCA_0600 SM00248 ankyrin repeats BCA_0602 SM00448 cheY-homologous receiver domain BCA_0602 SM00862 Transcriptional regulatory protein, C terminal BCA_0603 SM00387 Histidine kinase-like ATPases BCA_0603 SM00388 His Kinase A (phosphoacceptor) domain BCA_0606 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BCA_0606 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCA_0607 SM00387 Histidine kinase-like ATPases BCA_0608 SM00448 cheY-homologous receiver domain BCA_0610 SM00919 Malic enzyme, NAD binding domain BCA_0610 SM01274 BCA_0610 BCA_0613 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCA_0615 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCA_0615 SM00387 Histidine kinase-like ATPases BCA_0615 SM00388 His Kinase A (phosphoacceptor) domain BCA_0616 SM00448 cheY-homologous receiver domain BCA_0616 SM00862 Transcriptional regulatory protein, C terminal BCA_0621 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BCA_0621 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BCA_0625 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BCA_0625 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BCA_0627 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCA_0630 SM00028 Tetratricopeptide repeats BCA_0630 SM00530 Helix-turn-helix XRE-family like proteins BCA_0640 SM01091 Transporter associated domain BCA_0644 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCA_0652 SM00382 ATPases associated with a variety of cellular activities BCA_0658 SM00327 von Willebrand factor (vWF) type A domain BCA_0659 SM00382 ATPases associated with a variety of cellular activities BCA_0660 SM00155 Phospholipase D. Active site motifs. BCA_0662 SM00052 Putative diguanylate phosphodiesterase BCA_0662 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BCA_0662 SM00091 PAS domain BCA_0662 SM00267 diguanylate cyclase BCA_0664 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCA_0664 SM00866 BCA_0664 BCA_0666 SM00642 Alpha-amylase domain BCA_0670 SM00387 Histidine kinase-like ATPases BCA_0671 SM00421 helix_turn_helix, Lux Regulon BCA_0671 SM00448 cheY-homologous receiver domain BCA_0677 SM00382 ATPases associated with a variety of cellular activities BCA_0678 SM00062 Bacterial periplasmic substrate-binding proteins BCA_0678 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BCA_0688 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCA_0688 SM00387 Histidine kinase-like ATPases BCA_0688 SM00388 His Kinase A (phosphoacceptor) domain BCA_0689 SM00448 cheY-homologous receiver domain BCA_0689 SM00862 Transcriptional regulatory protein, C terminal BCA_0697 SM00382 ATPases associated with a variety of cellular activities BCA_0698 SM00382 ATPases associated with a variety of cellular activities BCA_0700 SM00347 helix_turn_helix multiple antibiotic resistance protein BCA_0702 SM00354 helix_turn _helix lactose operon repressor BCA_0705 SM00382 ATPases associated with a variety of cellular activities BCA_0711 SM00829 Enoylreductase BCA_0713 SM00770 Zinc dependent phospholipase C (alpha toxin) BCA_0720 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BCA_0722 SM00530 Helix-turn-helix XRE-family like proteins BCA_0732 SM00530 Helix-turn-helix XRE-family like proteins BCA_0752 SM00899 BCA_0752 BCA_0781 SM00116 Domain in cystathionine beta-synthase and other proteins. BCA_0785 SM00287 Bacterial SH3 domain homologues BCA_0789 SM00382 ATPases associated with a variety of cellular activities BCA_0808 SM00347 helix_turn_helix multiple antibiotic resistance protein BCA_0813 SM00382 ATPases associated with a variety of cellular activities BCA_0820 SM00640 Glycosyl hydrolases family 32 BCA_0822 SM00354 helix_turn _helix lactose operon repressor BCA_0836 SM00450 Rhodanese Homology Domain BCA_0838 SM00450 Rhodanese Homology Domain BCA_0839 SM00450 Rhodanese Homology Domain BCA_0839 SM00849 Metallo-beta-lactamase superfamily BCA_0841 SM00450 Rhodanese Homology Domain BCA_0847 SM00829 Enoylreductase BCA_0857 SM00287 Bacterial SH3 domain homologues BCA_0859 SM00382 ATPases associated with a variety of cellular activities BCA_0871 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen BCA_0893 SM00344 helix_turn_helix ASNC type BCA_0903 SM01060 BCA_0903 BCA_0910 SM00382 ATPases associated with a variety of cellular activities BCA_0911 SM00382 ATPases associated with a variety of cellular activities BCA_0912 SM00062 Bacterial periplasmic substrate-binding proteins BCA_0912 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BCA_0914 SM00382 ATPases associated with a variety of cellular activities BCA_0927 SM00644 BCA_0927 BCA_0928 SM00729 Elongator protein 3, MiaB family, Radical SAM BCA_0936 SM00957 SecA DEAD-like domain BCA_0936 SM00958 SecA preprotein cross-linking domain BCA_0949 SM00646 BCA_0949 BCA_0958 SM00382 ATPases associated with a variety of cellular activities BCA_0959 SM00382 ATPases associated with a variety of cellular activities BCA_0966 SM00091 PAS domain BCA_0966 SM00387 Histidine kinase-like ATPases BCA_0967 SM00448 cheY-homologous receiver domain BCA_0998 SM00347 helix_turn_helix multiple antibiotic resistance protein BCA_1007 SM01120 BCA_1007 BCA_1014 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BCA_1019 SM00460 Transglutaminase/protease-like homologues BCA_1031 SM00331 Sigma factor PP2C-like phosphatases BCA_1031 SM00448 cheY-homologous receiver domain BCA_1032 SM00138 Methyltransferase, chemotaxis proteins BCA_1033 SM00387 Histidine kinase-like ATPases BCA_1033 SM00388 His Kinase A (phosphoacceptor) domain BCA_1033 SM00448 cheY-homologous receiver domain BCA_1040 SM00829 Enoylreductase BCA_1048 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BCA_1056 SM00028 Tetratricopeptide repeats BCA_1061 SM00530 Helix-turn-helix XRE-family like proteins BCA_1072 SM00347 helix_turn_helix multiple antibiotic resistance protein BCA_1081 SM00347 helix_turn_helix multiple antibiotic resistance protein BCA_1084 SM00382 ATPases associated with a variety of cellular activities BCA_1112 SM00422 helix_turn_helix, mercury resistance BCA_1138 SM00354 helix_turn _helix lactose operon repressor BCA_1140 SM00849 Metallo-beta-lactamase superfamily BCA_1150 SM00860 SMI1 / KNR4 family BCA_1157 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BCA_1160 SM00342 helix_turn_helix, arabinose operon control protein BCA_1160 SM00871 Bacterial transcription activator, effector binding domain BCA_1161 SM00387 Histidine kinase-like ATPases BCA_1161 SM00388 His Kinase A (phosphoacceptor) domain BCA_1162 SM00448 cheY-homologous receiver domain BCA_1162 SM00862 Transcriptional regulatory protein, C terminal BCA_1175 SM00357 Cold shock protein domain BCA_1198 SM01060 BCA_1198 BCA_1200 SM00642 Alpha-amylase domain BCA_1201 SM00530 Helix-turn-helix XRE-family like proteins BCA_1203 SM00316 Ribosomal protein S1-like RNA-binding domain BCA_1212 SM00382 ATPases associated with a variety of cellular activities BCA_1212 SM01086 C-terminal, D2-small domain, of ClpB protein BCA_1218 SM00825 Beta-ketoacyl synthase BCA_1226 SM00382 ATPases associated with a variety of cellular activities BCA_1227 SM00382 ATPases associated with a variety of cellular activities BCA_1235 SM00155 Phospholipase D. Active site motifs. BCA_1241 SM01118 BCA_1241 BCA_1243 SM00954 Region found in RelA / SpoT proteins BCA_1274 SM00635 Bacterial Ig-like domain 2 BCA_1297 SM00861 Transketolase, pyrimidine binding domain BCA_1298 SM00530 Helix-turn-helix XRE-family like proteins BCA_1322 SM00382 ATPases associated with a variety of cellular activities BCA_1333 SM00530 Helix-turn-helix XRE-family like proteins BCA_1337 SM00382 ATPases associated with a variety of cellular activities BCA_1341 SM00014 Acid phosphatase homologues BCA_1351 SM00448 cheY-homologous receiver domain BCA_1351 SM00862 Transcriptional regulatory protein, C terminal BCA_1352 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCA_1352 SM00387 Histidine kinase-like ATPases BCA_1352 SM00388 His Kinase A (phosphoacceptor) domain BCA_1353 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCA_1353 SM00895 BCA_1353 BCA_1368 SM00822 BCA_1368 BCA_1381 SM00420 helix_turn_helix, Deoxyribose operon repressor BCA_1381 SM01134 BCA_1381 BCA_1384 SM01007 Class II Aldolase and Adducin N-terminal domain BCA_1388 SM00387 Histidine kinase-like ATPases BCA_1388 SM00388 His Kinase A (phosphoacceptor) domain BCA_1389 SM00347 helix_turn_helix multiple antibiotic resistance protein BCA_1393 SM00387 Histidine kinase-like ATPases BCA_1393 SM00388 His Kinase A (phosphoacceptor) domain BCA_1407 SM00507 HNH nucleases BCA_1410 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCA_1411 SM00382 ATPases associated with a variety of cellular activities BCA_1413 SM00382 ATPases associated with a variety of cellular activities BCA_1417 SM00344 helix_turn_helix ASNC type BCA_1441 SM00347 helix_turn_helix multiple antibiotic resistance protein BCA_1455 SM00917 LeuA allosteric (dimerisation) domain BCA_1456 SM01329 BCA_1456 BCA_1497 SM00387 Histidine kinase-like ATPases BCA_1498 SM00421 helix_turn_helix, Lux Regulon BCA_1498 SM00448 cheY-homologous receiver domain BCA_1515 SM00091 PAS domain BCA_1515 SM00387 Histidine kinase-like ATPases BCA_1515 SM00388 His Kinase A (phosphoacceptor) domain BCA_1519 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCA_1519 SM00387 Histidine kinase-like ATPases BCA_1519 SM00388 His Kinase A (phosphoacceptor) domain BCA_1530 SM00363 S4 RNA-binding domain BCA_1534 SM00448 cheY-homologous receiver domain BCA_1534 SM00862 Transcriptional regulatory protein, C terminal BCA_1535 SM00091 PAS domain BCA_1535 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCA_1535 SM00387 Histidine kinase-like ATPases BCA_1535 SM00388 His Kinase A (phosphoacceptor) domain BCA_1537 SM00257 Lysin motif BCA_1544 SM00487 DEAD-like helicases superfamily BCA_1544 SM00490 helicase superfamily c-terminal domain BCA_1546 SM00257 Lysin motif BCA_1548 SM00422 helix_turn_helix, mercury resistance BCA_1550 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BCA_1553 SM00644 BCA_1553 BCA_1555 SM00870 BCA_1555 BCA_1557 SM00316 Ribosomal protein S1-like RNA-binding domain BCA_1558 SM01240 BCA_1558 BCA_1569 SM00411 bacterial (prokaryotic) histone like domain BCA_1574 SM00562 BCA_1574 BCA_1578 SM00028 Tetratricopeptide repeats BCA_1579 SM00914 BCA_1579 BCA_1588 SM00986 Uracil DNA glycosylase superfamily BCA_1588 SM00987 UreE urease accessory protein, C-terminal domain BCA_1592 SM00851 MGS-like domain BCA_1601 SM00479 BCA_1601 BCA_1601 SM00491 BCA_1601 BCA_1606 SM00478 endonuclease III BCA_1606 SM00525 BCA_1606 BCA_1608 SM00060 Fibronectin type 3 domain BCA_1620 SM00981 BCA_1620 BCA_1622 SM00491 BCA_1622 BCA_1636 SM00450 Rhodanese Homology Domain BCA_1646 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BCA_1646 SM00475 5'-3' exonuclease BCA_1660 SM00357 Cold shock protein domain BCA_1670 SM00849 Metallo-beta-lactamase superfamily BCA_1671 SM00422 helix_turn_helix, mercury resistance BCA_1671 SM00871 Bacterial transcription activator, effector binding domain BCA_1690 SM00448 cheY-homologous receiver domain BCA_1691 SM00073 Histidine Phosphotransfer domain BCA_1691 SM00260 Two component signalling adaptor domain BCA_1691 SM00387 Histidine kinase-like ATPases BCA_1691 SM01231 BCA_1691 BCA_1695 SM00138 Methyltransferase, chemotaxis proteins BCA_1710 SM00382 ATPases associated with a variety of cellular activities BCA_1717 SM00260 Two component signalling adaptor domain BCA_1717 SM00448 cheY-homologous receiver domain BCA_1731 SM00382 ATPases associated with a variety of cellular activities BCA_1731 SM00962 SRP54-type protein, GTPase domain BCA_1733 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BCA_1744 SM00530 Helix-turn-helix XRE-family like proteins BCA_1748 SM00382 ATPases associated with a variety of cellular activities BCA_1751 SM00849 Metallo-beta-lactamase superfamily BCA_1751 SM01027 Beta-Casp domain BCA_1755 SM00835 Cupin BCA_1758 SM00855 Phosphoglycerate mutase family BCA_1762 SM00347 helix_turn_helix multiple antibiotic resistance protein BCA_1770 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCA_1770 SM00895 BCA_1770 BCA_1772 SM00833 Cobalamin synthesis protein cobW C-terminal domain BCA_1791 SM00530 Helix-turn-helix XRE-family like proteins BCA_1799 SM00421 helix_turn_helix, Lux Regulon BCA_1799 SM00448 cheY-homologous receiver domain BCA_1801 SM00382 ATPases associated with a variety of cellular activities BCA_1804 SM00155 Phospholipase D. Active site motifs. BCA_1808 SM00919 Malic enzyme, NAD binding domain BCA_1808 SM01274 BCA_1808 BCA_1809 SM00387 Histidine kinase-like ATPases BCA_1810 SM00448 cheY-homologous receiver domain BCA_1812 SM00487 DEAD-like helicases superfamily BCA_1812 SM00490 helicase superfamily c-terminal domain BCA_1816 SM00530 Helix-turn-helix XRE-family like proteins BCA_1825 SM00646 BCA_1825 BCA_1826 SM00047 Lysozyme subfamily 2 BCA_1861 SM00854 Bacterial capsule synthesis protein PGA_cap BCA_1869 SM00850 LytTr DNA-binding domain BCA_1876 SM00860 SMI1 / KNR4 family BCA_1884 SM00530 Helix-turn-helix XRE-family like proteins BCA_1933 SM00646 BCA_1933 BCA_1941 SM00729 Elongator protein 3, MiaB family, Radical SAM BCA_1943 SM00448 cheY-homologous receiver domain BCA_1943 SM00862 Transcriptional regulatory protein, C terminal BCA_1944 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCA_1944 SM00387 Histidine kinase-like ATPases BCA_1944 SM00388 His Kinase A (phosphoacceptor) domain BCA_1948 SM00450 Rhodanese Homology Domain BCA_1960 SM01133 BCA_1960 BCA_1962 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BCA_1968 SM01011 Aminopeptidase P, N-terminal domain BCA_1970 SM00287 Bacterial SH3 domain homologues BCA_1972 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BCA_1972 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BCA_1972 SM00493 BCA_1972 BCA_1992 SM00833 Cobalamin synthesis protein cobW C-terminal domain BCA_1999 SM00382 ATPases associated with a variety of cellular activities BCA_2000 SM00382 ATPases associated with a variety of cellular activities BCA_2007 SM00347 helix_turn_helix multiple antibiotic resistance protein BCA_2011 SM00382 ATPases associated with a variety of cellular activities BCA_2012 SM00382 ATPases associated with a variety of cellular activities BCA_2018 SM00287 Bacterial SH3 domain homologues BCA_2020 SM00382 ATPases associated with a variety of cellular activities BCA_2021 SM00448 cheY-homologous receiver domain BCA_2021 SM00862 Transcriptional regulatory protein, C terminal BCA_2022 SM00387 Histidine kinase-like ATPases BCA_2022 SM00388 His Kinase A (phosphoacceptor) domain BCA_2037 SM00448 cheY-homologous receiver domain BCA_2037 SM00862 Transcriptional regulatory protein, C terminal BCA_2038 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCA_2038 SM00387 Histidine kinase-like ATPases BCA_2038 SM00388 His Kinase A (phosphoacceptor) domain BCA_2052 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCA_2057 SM00460 Transglutaminase/protease-like homologues BCA_2078 SM00857 Resolvase, N terminal domain BCA_2081 SM00966 SpoVT / AbrB like domain BCA_2083 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCA_2090 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BCA_2090 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCA_2102 SM00833 Cobalamin synthesis protein cobW C-terminal domain BCA_2116 SM00855 Phosphoglycerate mutase family BCA_2126 SM00155 Phospholipase D. Active site motifs. BCA_2131 SM01091 Transporter associated domain BCA_2145 SM00244 prohibitin homologues BCA_2147 SM00346 helix_turn_helix isocitrate lyase regulation BCA_2154 SM00859 Semialdehyde dehydrogenase, NAD binding domain BCA_2158 SM00855 Phosphoglycerate mutase family BCA_2161 SM01005 Alanine racemase, C-terminal domain BCA_2167 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCA_2197 SM00487 DEAD-like helicases superfamily BCA_2197 SM00490 helicase superfamily c-terminal domain BCA_2201 SM00829 Enoylreductase BCA_2205 SM00849 Metallo-beta-lactamase superfamily BCA_2208 SM00460 Transglutaminase/protease-like homologues BCA_2213 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BCA_2217 SM00100 Cyclic nucleotide-monophosphate binding domain BCA_2217 SM00419 helix_turn_helix, cAMP Regulatory protein BCA_2218 SM00729 Elongator protein 3, MiaB family, Radical SAM BCA_2220 SM00852 Probable molybdopterin binding domain BCA_2233 SM00894 Excalibur calcium-binding domain BCA_2252 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BCA_2253 SM00382 ATPases associated with a variety of cellular activities BCA_2259 SM00567 E-Z type HEAT repeats BCA_2259 SM00932 Scaffold protein Nfu/NifU N terminal BCA_2263 SM00836 DALR anticodon binding domain BCA_2263 SM01016 Arginyl tRNA synthetase N terminal dom BCA_2266 SM00028 Tetratricopeptide repeats BCA_2272 SM00327 von Willebrand factor (vWF) type A domain BCA_2275 SM00382 ATPases associated with a variety of cellular activities BCA_2277 SM00028 Tetratricopeptide repeats BCA_2282 SM00857 Resolvase, N terminal domain BCA_2290 SM00857 Resolvase, N terminal domain BCA_2296 SM00448 cheY-homologous receiver domain BCA_2296 SM00862 Transcriptional regulatory protein, C terminal BCA_2297 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCA_2297 SM00387 Histidine kinase-like ATPases BCA_2297 SM00388 His Kinase A (phosphoacceptor) domain BCA_2312 SM00382 ATPases associated with a variety of cellular activities BCA_2325 SM00563 Phosphate acyltransferases BCA_2337 SM00014 Acid phosphatase homologues BCA_2347 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BCA_2348 SM00421 helix_turn_helix, Lux Regulon BCA_2348 SM00448 cheY-homologous receiver domain BCA_2350 SM00829 Enoylreductase BCA_2361 SM00382 ATPases associated with a variety of cellular activities BCA_2369 SM01091 Transporter associated domain BCA_2372 SM00387 Histidine kinase-like ATPases BCA_2372 SM00388 His Kinase A (phosphoacceptor) domain BCA_2376 SM00882 Coenzyme A transferase BCA_2377 SM00882 Coenzyme A transferase BCA_2380 SM00382 ATPases associated with a variety of cellular activities BCA_2388 SM00219 Tyrosine kinase, catalytic domain BCA_2391 SM00014 Acid phosphatase homologues BCA_2400 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. BCA_2431 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCA_2439 SM00823 Phosphopantetheine attachment site BCA_2439 SM00824 Thioesterase BCA_2440 SM00923 MbtH-like protein BCA_2444 SM00411 bacterial (prokaryotic) histone like domain BCA_2453 SM00363 S4 RNA-binding domain BCA_2455 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BCA_2457 SM00382 ATPases associated with a variety of cellular activities BCA_2467 SM00849 Metallo-beta-lactamase superfamily BCA_2473 SM00849 Metallo-beta-lactamase superfamily BCA_2477 SM01059 Chloramphenicol acetyltransferase BCA_2482 SM00530 Helix-turn-helix XRE-family like proteins BCA_2491 SM00357 Cold shock protein domain BCA_2497 SM00859 Semialdehyde dehydrogenase, NAD binding domain BCA_2505 SM00382 ATPases associated with a variety of cellular activities BCA_2506 SM00382 ATPases associated with a variety of cellular activities BCA_2507 SM00646 BCA_2507 BCA_2509 SM00530 Helix-turn-helix XRE-family like proteins BCA_2514 SM00835 Cupin BCA_2515 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BCA_2530 SM01207 BCA_2530 BCA_2539 SM00849 Metallo-beta-lactamase superfamily BCA_2542 SM00487 DEAD-like helicases superfamily BCA_2542 SM00490 helicase superfamily c-terminal domain BCA_2549 SM00382 ATPases associated with a variety of cellular activities BCA_2562 SM00110 Complement component C1q domain. BCA_2572 SM00347 helix_turn_helix multiple antibiotic resistance protein BCA_2573 SM00855 Phosphoglycerate mutase family BCA_2584 SM00936 Penicillin-binding protein 5, C-terminal domain BCA_2593 SM00354 helix_turn _helix lactose operon repressor BCA_2610 SM00530 Helix-turn-helix XRE-family like proteins BCA_2614 SM00646 BCA_2614 BCA_2617 SM00382 ATPases associated with a variety of cellular activities BCA_2619 SM00052 Putative diguanylate phosphodiesterase BCA_2619 SM00091 PAS domain BCA_2619 SM00267 diguanylate cyclase BCA_2621 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BCA_2621 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCA_2621 SM00319 Homologues of the ligand binding domain of Tar BCA_2625 SM00450 Rhodanese Homology Domain BCA_2625 SM00849 Metallo-beta-lactamase superfamily BCA_2632 SM00878 Biotin carboxylase C-terminal domain BCA_2645 SM00387 Histidine kinase-like ATPases BCA_2645 SM00388 His Kinase A (phosphoacceptor) domain BCA_2646 SM00448 cheY-homologous receiver domain BCA_2646 SM00862 Transcriptional regulatory protein, C terminal BCA_2657 SM00382 ATPases associated with a variety of cellular activities BCA_2661 SM00422 helix_turn_helix, mercury resistance BCA_2661 SM00871 Bacterial transcription activator, effector binding domain BCA_2671 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCA_2686 SM00448 cheY-homologous receiver domain BCA_2686 SM00862 Transcriptional regulatory protein, C terminal BCA_2687 SM00387 Histidine kinase-like ATPases BCA_2689 SM00382 ATPases associated with a variety of cellular activities BCA_2693 SM00382 ATPases associated with a variety of cellular activities BCA_2699 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCA_2700 SM01209 BCA_2700 BCA_2726 SM00091 PAS domain BCA_2726 SM00387 Histidine kinase-like ATPases BCA_2726 SM00388 His Kinase A (phosphoacceptor) domain BCA_2732 SM00382 ATPases associated with a variety of cellular activities BCA_2735 SM00387 Histidine kinase-like ATPases BCA_2735 SM00388 His Kinase A (phosphoacceptor) domain BCA_2738 SM00829 Enoylreductase BCA_2739 SM00014 Acid phosphatase homologues BCA_2740 SM00740 BCA_2740 BCA_2754 SM00422 helix_turn_helix, mercury resistance BCA_2761 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCA_2773 SM00480 DNA polymerase III beta subunit BCA_2779 SM00855 Phosphoglycerate mutase family BCA_2795 SM00465 GIY-YIG type nucleases (URI domain) BCA_2809 SM00014 Acid phosphatase homologues BCA_2811 SM00642 Alpha-amylase domain BCA_2815 SM00871 Bacterial transcription activator, effector binding domain BCA_2820 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCA_2844 SM00382 ATPases associated with a variety of cellular activities BCA_2848 SM00420 helix_turn_helix, Deoxyribose operon repressor BCA_2848 SM01134 BCA_2848 BCA_2857 SM00861 Transketolase, pyrimidine binding domain BCA_2870 SM00116 Domain in cystathionine beta-synthase and other proteins. BCA_2870 SM00382 ATPases associated with a variety of cellular activities BCA_2877 SM00060 Fibronectin type 3 domain BCA_2877 SM00495 Chitin-binding domain type 3 BCA_2884 SM00849 Metallo-beta-lactamase superfamily BCA_2898 SM00341 Helicase and RNase D C-terminal BCA_2898 SM00487 DEAD-like helicases superfamily BCA_2898 SM00490 helicase superfamily c-terminal domain BCA_2898 SM00956 BCA_2898 BCA_2907 SM01131 BCA_2907 BCA_2913 SM01130 BCA_2913 BCA_2917 SM00091 PAS domain BCA_2917 SM00382 ATPases associated with a variety of cellular activities BCA_2931 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BCA_2940 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BCA_2941 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCA_2941 SM00387 Histidine kinase-like ATPases BCA_2941 SM00388 His Kinase A (phosphoacceptor) domain BCA_2942 SM00448 cheY-homologous receiver domain BCA_2942 SM00862 Transcriptional regulatory protein, C terminal BCA_2950 SM00344 helix_turn_helix ASNC type BCA_2983 SM00382 ATPases associated with a variety of cellular activities BCA_2984 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCA_2995 SM00062 Bacterial periplasmic substrate-binding proteins BCA_2996 SM00382 ATPases associated with a variety of cellular activities BCA_3000 SM00028 Tetratricopeptide repeats BCA_3020 SM00382 ATPases associated with a variety of cellular activities BCA_3029 SM00830 Chorismate mutase type II BCA_3037 SM00287 Bacterial SH3 domain homologues BCA_3042 SM00091 PAS domain BCA_3042 SM00382 ATPases associated with a variety of cellular activities BCA_3049 SM00382 ATPases associated with a variety of cellular activities BCA_3053 SM01133 BCA_3053 BCA_3060 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCA_3064 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BCA_3067 SM00346 helix_turn_helix isocitrate lyase regulation BCA_3071 SM00098 Alkaline phosphatase homologues BCA_3073 SM00530 Helix-turn-helix XRE-family like proteins BCA_3078 SM00850 LytTr DNA-binding domain BCA_3095 SM01060 BCA_3095 BCA_3101 SM00860 SMI1 / KNR4 family BCA_3104 SM00347 helix_turn_helix multiple antibiotic resistance protein BCA_3106 SM00889 Elongation factor G, domain IV BCA_3111 SM00382 ATPases associated with a variety of cellular activities BCA_3112 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCA_3113 SM00860 SMI1 / KNR4 family BCA_3115 SM00382 ATPases associated with a variety of cellular activities BCA_3120 SM00342 helix_turn_helix, arabinose operon control protein BCA_3120 SM00871 Bacterial transcription activator, effector binding domain BCA_3125 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCA_3130 SM00387 Histidine kinase-like ATPases BCA_3130 SM00388 His Kinase A (phosphoacceptor) domain BCA_3131 SM00448 cheY-homologous receiver domain BCA_3131 SM00862 Transcriptional regulatory protein, C terminal BCA_3144 SM00422 helix_turn_helix, mercury resistance BCA_3157 SM00797 Allophanate hydrolase subunit 2 BCA_3158 SM00796 Allophanate hydrolase subunit 1 BCA_3159 SM00346 helix_turn_helix isocitrate lyase regulation BCA_3163 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCA_3177 SM00849 Metallo-beta-lactamase superfamily BCA_3204 SM00829 Enoylreductase BCA_3223 SM00382 ATPases associated with a variety of cellular activities BCA_3226 SM00421 helix_turn_helix, Lux Regulon BCA_3226 SM00448 cheY-homologous receiver domain BCA_3229 SM00382 ATPases associated with a variety of cellular activities BCA_3233 SM00226 Low molecular weight phosphatase family BCA_3236 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCA_3238 SM00028 Tetratricopeptide repeats BCA_3250 SM00347 helix_turn_helix multiple antibiotic resistance protein BCA_3257 SM00448 cheY-homologous receiver domain BCA_3257 SM00862 Transcriptional regulatory protein, C terminal BCA_3258 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCA_3258 SM00387 Histidine kinase-like ATPases BCA_3258 SM00388 His Kinase A (phosphoacceptor) domain BCA_3268 SM00849 Metallo-beta-lactamase superfamily BCA_3276 SM00422 helix_turn_helix, mercury resistance BCA_3284 SM00382 ATPases associated with a variety of cellular activities BCA_3286 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCA_3288 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCA_3288 SM00387 Histidine kinase-like ATPases BCA_3288 SM00388 His Kinase A (phosphoacceptor) domain BCA_3289 SM00448 cheY-homologous receiver domain BCA_3289 SM00862 Transcriptional regulatory protein, C terminal BCA_3291 SM00347 helix_turn_helix multiple antibiotic resistance protein BCA_3308 SM00450 Rhodanese Homology Domain BCA_3308 SM00849 Metallo-beta-lactamase superfamily BCA_3315 SM00387 Histidine kinase-like ATPases BCA_3315 SM00388 His Kinase A (phosphoacceptor) domain BCA_3316 SM00448 cheY-homologous receiver domain BCA_3316 SM00862 Transcriptional regulatory protein, C terminal BCA_3319 SM00860 SMI1 / KNR4 family BCA_3327 SM00354 helix_turn _helix lactose operon repressor BCA_3328 SM00028 Tetratricopeptide repeats BCA_3337 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BCA_3337 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCA_3337 SM00319 Homologues of the ligand binding domain of Tar BCA_3347 SM00344 helix_turn_helix ASNC type BCA_3360 SM00342 helix_turn_helix, arabinose operon control protein BCA_3362 SM00860 SMI1 / KNR4 family BCA_3366 SM00287 Bacterial SH3 domain homologues BCA_3366 SM00644 BCA_3366 BCA_3379 SM00347 helix_turn_helix multiple antibiotic resistance protein BCA_3384 SM00382 ATPases associated with a variety of cellular activities BCA_3386 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCA_3401 SM00382 ATPases associated with a variety of cellular activities BCA_3410 SM00387 Histidine kinase-like ATPases BCA_3410 SM00421 helix_turn_helix, Lux Regulon BCA_3410 SM00448 cheY-homologous receiver domain BCA_3421 SM00382 ATPases associated with a variety of cellular activities BCA_3424 SM00530 Helix-turn-helix XRE-family like proteins BCA_3439 SM01266 BCA_3439 BCA_3441 SM00382 ATPases associated with a variety of cellular activities BCA_3453 SM00028 Tetratricopeptide repeats BCA_3458 SM01091 Transporter associated domain BCA_3459 SM00422 helix_turn_helix, mercury resistance BCA_3467 SM01350 BCA_3467 BCA_3468 SM00861 Transketolase, pyrimidine binding domain BCA_3478 SM00914 BCA_3478 BCA_3483 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCA_3483 SM00866 BCA_3483 BCA_3487 SM00849 Metallo-beta-lactamase superfamily BCA_3500 SM00248 ankyrin repeats BCA_3501 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCA_3502 SM00636 BCA_3502 BCA_3509 SM00871 Bacterial transcription activator, effector binding domain BCA_3518 SM00382 ATPases associated with a variety of cellular activities BCA_3524 SM00849 Metallo-beta-lactamase superfamily BCA_3525 SM00641 Glycosyl hydrolases family 25 BCA_3538 SM00849 Metallo-beta-lactamase superfamily BCA_3542 SM00829 Enoylreductase BCA_3563 SM00829 Enoylreductase BCA_3564 SM00855 Phosphoglycerate mutase family BCA_3566 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BCA_3566 SM00534 ATPase domain of DNA mismatch repair MUTS family BCA_3570 SM00642 Alpha-amylase domain BCA_3585 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCA_3586 SM00829 Enoylreductase BCA_3588 SM00028 Tetratricopeptide repeats BCA_3602 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BCA_3612 SM00479 BCA_3612 BCA_3613 SM00357 Cold shock protein domain BCA_3636 SM00530 Helix-turn-helix XRE-family like proteins BCA_3660 SM00852 Probable molybdopterin binding domain BCA_3663 SM00729 Elongator protein 3, MiaB family, Radical SAM BCA_3667 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BCA_3667 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BCA_3686 SM00382 ATPases associated with a variety of cellular activities BCA_3690 SM00434 DNA Topoisomerase IV BCA_3691 SM00387 Histidine kinase-like ATPases BCA_3691 SM00433 TopoisomeraseII BCA_3692 SM00881 CoA binding domain BCA_3693 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BCA_3694 SM00448 cheY-homologous receiver domain BCA_3694 SM00862 Transcriptional regulatory protein, C terminal BCA_3697 SM01207 BCA_3697 BCA_3700 SM00257 Lysin motif BCA_3700 SM00636 BCA_3700 BCA_3704 SM00479 BCA_3704 BCA_3708 SM00382 ATPases associated with a variety of cellular activities BCA_3717 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BCA_3732 SM00644 BCA_3732 BCA_3732 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. BCA_3733 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BCA_3736 SM00091 PAS domain BCA_3736 SM00387 Histidine kinase-like ATPases BCA_3736 SM00388 His Kinase A (phosphoacceptor) domain BCA_3742 SM01058 CarD-like/TRCF domain BCA_3765 SM00382 ATPases associated with a variety of cellular activities BCA_3774 SM00644 BCA_3774 BCA_3777 SM00382 ATPases associated with a variety of cellular activities BCA_3778 SM00382 ATPases associated with a variety of cellular activities BCA_3781 SM00861 Transketolase, pyrimidine binding domain BCA_3784 SM00382 ATPases associated with a variety of cellular activities BCA_3785 SM00062 Bacterial periplasmic substrate-binding proteins BCA_3788 SM00857 Resolvase, N terminal domain BCA_3794 SM01230 BCA_3794 BCA_3795 SM00422 helix_turn_helix, mercury resistance BCA_3800 SM00382 ATPases associated with a variety of cellular activities BCA_3806 SM00287 Bacterial SH3 domain homologues BCA_3809 SM00420 helix_turn_helix, Deoxyribose operon repressor BCA_3809 SM01134 BCA_3809 BCA_3815 SM00636 BCA_3815 BCA_3819 SM00411 bacterial (prokaryotic) histone like domain BCA_3828 SM00382 ATPases associated with a variety of cellular activities BCA_3834 SM00342 helix_turn_helix, arabinose operon control protein BCA_3836 SM00478 endonuclease III BCA_3844 SM00052 Putative diguanylate phosphodiesterase BCA_3844 SM00091 PAS domain BCA_3844 SM00267 diguanylate cyclase BCA_3854 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCA_3856 SM00148 Phospholipase C, catalytic domain (part); domain X BCA_3859 SM00257 Lysin motif BCA_3865 SM00853 MutL C terminal dimerisation domain BCA_3865 SM01340 BCA_3865 BCA_3866 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BCA_3866 SM00534 ATPase domain of DNA mismatch repair MUTS family BCA_3869 SM00729 Elongator protein 3, MiaB family, Radical SAM BCA_3875 SM00322 K homology RNA-binding domain BCA_3875 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BCA_3876 SM00382 ATPases associated with a variety of cellular activities BCA_3877 SM00852 Probable molybdopterin binding domain BCA_3887 SM00382 ATPases associated with a variety of cellular activities BCA_3889 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCA_3889 SM00866 BCA_3889 BCA_3891 SM00382 ATPases associated with a variety of cellular activities BCA_3891 SM00843 BCA_3891 BCA_3894 SM00849 Metallo-beta-lactamase superfamily BCA_3895 SM01130 BCA_3895 BCA_3897 SM00859 Semialdehyde dehydrogenase, NAD binding domain BCA_3903 SM00316 Ribosomal protein S1-like RNA-binding domain BCA_3903 SM00322 K homology RNA-binding domain BCA_3904 SM01387 BCA_3904 BCA_3905 SM00904 Riboflavin kinase BCA_3912 SM00316 Ribosomal protein S1-like RNA-binding domain BCA_3912 SM00322 K homology RNA-binding domain BCA_3916 SM00507 HNH nucleases BCA_3917 SM00479 BCA_3917 BCA_3917 SM00481 DNA polymerase alpha chain like domain BCA_3919 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BCA_3928 SM00382 ATPases associated with a variety of cellular activities BCA_3928 SM01086 C-terminal, D2-small domain, of ClpB protein BCA_3932 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BCA_3932 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BCA_3932 SM00493 BCA_3932 BCA_3934 SM00881 CoA binding domain BCA_3945 SM00382 ATPases associated with a variety of cellular activities BCA_3945 SM00962 SRP54-type protein, GTPase domain BCA_3945 SM00963 SRP54-type protein, helical bundle domain BCA_3947 SM00382 ATPases associated with a variety of cellular activities BCA_3947 SM00962 SRP54-type protein, GTPase domain BCA_3947 SM00963 SRP54-type protein, helical bundle domain BCA_3948 SM00968 SMC proteins Flexible Hinge Domain BCA_3949 SM00358 Double-stranded RNA binding motif BCA_3949 SM00535 Ribonuclease III family BCA_3951 SM00822 BCA_3951 BCA_3952 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BCA_3955 SM00487 DEAD-like helicases superfamily BCA_3955 SM00490 helicase superfamily c-terminal domain BCA_3956 SM01120 BCA_3956 BCA_3956 SM01121 BCA_3956 BCA_3959 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain BCA_3962 SM00220 Serine/Threonine protein kinases, catalytic domain BCA_3962 SM00740 BCA_3962 BCA_3963 SM00331 Sigma factor PP2C-like phosphatases BCA_3963 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BCA_3968 SM00487 DEAD-like helicases superfamily BCA_3968 SM00490 helicase superfamily c-terminal domain BCA_3970 SM01409 BCA_3970 BCA_3971 SM00072 Guanylate kinase homologues. BCA_3974 SM00831 Cation transporter/ATPase, N-terminus BCA_3984 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BCA_3987 SM00851 MGS-like domain BCA_3987 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BCA_3987 SM01209 BCA_3987 BCA_3988 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BCA_3996 SM00363 S4 RNA-binding domain BCA_4001 SM00363 S4 RNA-binding domain BCA_4010 SM00864 Tubulin/FtsZ family, GTPase domain BCA_4010 SM00865 Tubulin/FtsZ family, C-terminal domain BCA_4011 SM00842 Cell division protein FtsA BCA_4019 SM00740 BCA_4019 BCA_4020 SM00740 BCA_4020 BCA_4026 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains BCA_4030 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BCA_4039 SM00855 Phosphoglycerate mutase family BCA_4052 SM00878 Biotin carboxylase C-terminal domain BCA_4056 SM00670 Large family of predicted nucleotide-binding domains BCA_4061 SM00838 Elongation factor G C-terminus BCA_4076 SM00861 Transketolase, pyrimidine binding domain BCA_4082 SM00849 Metallo-beta-lactamase superfamily BCA_4096 SM00052 Putative diguanylate phosphodiesterase BCA_4106 SM00267 diguanylate cyclase BCA_4116 SM00387 Histidine kinase-like ATPases BCA_4116 SM00388 His Kinase A (phosphoacceptor) domain BCA_4119 SM00354 helix_turn _helix lactose operon repressor BCA_4124 SM00642 Alpha-amylase domain BCA_4125 SM00642 Alpha-amylase domain BCA_4126 SM00382 ATPases associated with a variety of cellular activities BCA_4133 SM00382 ATPases associated with a variety of cellular activities BCA_4151 SM01007 Class II Aldolase and Adducin N-terminal domain BCA_4156 SM00267 diguanylate cyclase BCA_4163 SM01061 CAT RNA binding domain BCA_4165 SM00866 BCA_4165 BCA_4168 SM00849 Metallo-beta-lactamase superfamily BCA_4186 SM00387 Histidine kinase-like ATPases BCA_4188 SM00936 Penicillin-binding protein 5, C-terminal domain BCA_4189 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCA_4190 SM00382 ATPases associated with a variety of cellular activities BCA_4193 SM00347 helix_turn_helix multiple antibiotic resistance protein BCA_4197 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BCA_4216 SM00354 helix_turn _helix lactose operon repressor BCA_4220 SM00704 CDGSH-type zinc finger. Function unknown. BCA_4227 SM00729 Elongator protein 3, MiaB family, Radical SAM BCA_4227 SM00876 Biotin and Thiamin Synthesis associated domain BCA_4238 SM00347 helix_turn_helix multiple antibiotic resistance protein BCA_4245 SM00859 Semialdehyde dehydrogenase, NAD binding domain BCA_4248 SM00849 Metallo-beta-lactamase superfamily BCA_4253 SM00849 Metallo-beta-lactamase superfamily BCA_4261 SM00382 ATPases associated with a variety of cellular activities BCA_4263 SM00062 Bacterial periplasmic substrate-binding proteins BCA_4263 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BCA_4270 SM00861 Transketolase, pyrimidine binding domain BCA_4274 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BCA_4276 SM00091 PAS domain BCA_4276 SM00382 ATPases associated with a variety of cellular activities BCA_4281 SM00448 cheY-homologous receiver domain BCA_4282 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BCA_4285 SM00363 S4 RNA-binding domain BCA_4286 SM00861 Transketolase, pyrimidine binding domain BCA_4293 SM00878 Biotin carboxylase C-terminal domain BCA_4302 SM00382 ATPases associated with a variety of cellular activities BCA_4305 SM00841 Elongation factor P, C-terminal BCA_4305 SM01185 BCA_4305 BCA_4312 SM00529 Helix-turn-helix diphteria tox regulatory element BCA_4319 SM00450 Rhodanese Homology Domain BCA_4320 SM00354 helix_turn _helix lactose operon repressor BCA_4330 SM00382 ATPases associated with a variety of cellular activities BCA_4331 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCA_4337 SM00487 DEAD-like helicases superfamily BCA_4337 SM00490 helicase superfamily c-terminal domain BCA_4345 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. BCA_4353 SM00382 ATPases associated with a variety of cellular activities BCA_4363 SM01018 B12 binding domain BCA_4370 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCA_4372 SM00849 Metallo-beta-lactamase superfamily BCA_4380 SM00382 ATPases associated with a variety of cellular activities BCA_4393 SM00382 ATPases associated with a variety of cellular activities BCA_4396 SM00518 AP endonuclease family 2 BCA_4397 SM00487 DEAD-like helicases superfamily BCA_4397 SM00490 helicase superfamily c-terminal domain BCA_4404 SM00400 zinc finger BCA_4404 SM00493 BCA_4404 BCA_4404 SM00766 DNA primase DnaG DnaB-binding BCA_4408 SM00116 Domain in cystathionine beta-synthase and other proteins. BCA_4415 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BCA_4421 SM00729 Elongator protein 3, MiaB family, Radical SAM BCA_4424 SM00271 DnaJ molecular chaperone homology domain BCA_4428 SM00729 Elongator protein 3, MiaB family, Radical SAM BCA_4430 SM00838 Elongation factor G C-terminus BCA_4436 SM00849 Metallo-beta-lactamase superfamily BCA_4438 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BCA_4442 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BCA_4444 SM01103 BCA_4444 BCA_4456 SM00954 Region found in RelA / SpoT proteins BCA_4458 SM00098 Alkaline phosphatase homologues BCA_4464 SM00855 Phosphoglycerate mutase family BCA_4474 SM00530 Helix-turn-helix XRE-family like proteins BCA_4479 SM00382 ATPases associated with a variety of cellular activities BCA_4498 SM00732 Likely ribonuclease with RNase H fold. BCA_4500 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BCA_4507 SM00028 Tetratricopeptide repeats BCA_4511 SM00382 ATPases associated with a variety of cellular activities BCA_4518 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BCA_4518 SM00954 Region found in RelA / SpoT proteins BCA_4527 SM01323 BCA_4527 BCA_4531 SM00382 ATPases associated with a variety of cellular activities BCA_4532 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BCA_4537 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCA_4540 SM00257 Lysin motif BCA_4549 SM00382 ATPases associated with a variety of cellular activities BCA_4550 SM00387 Histidine kinase-like ATPases BCA_4551 SM00448 cheY-homologous receiver domain BCA_4551 SM00862 Transcriptional regulatory protein, C terminal BCA_4553 SM01317 BCA_4553 BCA_4572 SM00257 Lysin motif BCA_4574 SM01004 Delta-aminolevulinic acid dehydratase BCA_4579 SM00347 helix_turn_helix multiple antibiotic resistance protein BCA_4582 SM00382 ATPases associated with a variety of cellular activities BCA_4582 SM00464 Found in ATP-dependent protease La (LON) BCA_4583 SM00382 ATPases associated with a variety of cellular activities BCA_4584 SM00382 ATPases associated with a variety of cellular activities BCA_4584 SM00994 ClpX C4-type zinc finger BCA_4584 SM01086 C-terminal, D2-small domain, of ClpB protein BCA_4597 SM00909 Sporulation and spore germination BCA_4605 SM00421 helix_turn_helix, Lux Regulon BCA_4609 SM00530 Helix-turn-helix XRE-family like proteins BCA_4615 SM00382 ATPases associated with a variety of cellular activities BCA_4626 SM00465 GIY-YIG type nucleases (URI domain) BCA_4628 SM00893 Electron transfer flavoprotein domain BCA_4629 SM00893 Electron transfer flavoprotein domain BCA_4641 SM00382 ATPases associated with a variety of cellular activities BCA_4642 SM00387 Histidine kinase-like ATPases BCA_4642 SM00388 His Kinase A (phosphoacceptor) domain BCA_4643 SM00448 cheY-homologous receiver domain BCA_4643 SM00862 Transcriptional regulatory protein, C terminal BCA_4646 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BCA_4650 SM00382 ATPases associated with a variety of cellular activities BCA_4653 SM00725 NEAr Transporter domain BCA_4654 SM00725 NEAr Transporter domain BCA_4656 SM00363 S4 RNA-binding domain BCA_4657 SM00463 Small MutS-related domain BCA_4657 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BCA_4657 SM00534 ATPase domain of DNA mismatch repair MUTS family BCA_4658 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BCA_4658 SM00481 DNA polymerase alpha chain like domain BCA_4658 SM00483 DNA polymerase X family BCA_4666 SM00873 B3/4 domain BCA_4666 SM00874 tRNA synthetase B5 domain BCA_4666 SM00896 Ferredoxin-fold anticodon binding domain BCA_4668 SM00967 RNA 2'-O ribose methyltransferase substrate binding BCA_4686 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BCA_4688 SM00382 ATPases associated with a variety of cellular activities BCA_4693 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BCA_4696 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BCA_4696 SM01232 BCA_4696 BCA_4697 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BCA_4697 SM00474 3'-5' exonuclease BCA_4697 SM00475 5'-3' exonuclease BCA_4697 SM00482 DNA polymerase A domain BCA_4698 SM00091 PAS domain BCA_4698 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCA_4698 SM00387 Histidine kinase-like ATPases BCA_4698 SM00388 His Kinase A (phosphoacceptor) domain BCA_4699 SM00448 cheY-homologous receiver domain BCA_4699 SM00862 Transcriptional regulatory protein, C terminal BCA_4703 SM01329 BCA_4703 BCA_4712 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCA_4713 SM00919 Malic enzyme, NAD binding domain BCA_4713 SM01274 BCA_4713 BCA_4714 SM00481 DNA polymerase alpha chain like domain BCA_4723 SM00116 Domain in cystathionine beta-synthase and other proteins. BCA_4725 SM00849 Metallo-beta-lactamase superfamily BCA_4737 SM00530 Helix-turn-helix XRE-family like proteins BCA_4739 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BCA_4739 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BCA_4762 SM00981 BCA_4762 BCA_4770 SM00363 S4 RNA-binding domain BCA_4770 SM01390 BCA_4770 BCA_4778 SM00363 S4 RNA-binding domain BCA_4782 SM00116 Domain in cystathionine beta-synthase and other proteins. BCA_4786 SM00448 cheY-homologous receiver domain BCA_4786 SM00862 Transcriptional regulatory protein, C terminal BCA_4787 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCA_4787 SM00387 Histidine kinase-like ATPases BCA_4787 SM00388 His Kinase A (phosphoacceptor) domain BCA_4788 SM00248 ankyrin repeats BCA_4795 SM00354 helix_turn _helix lactose operon repressor BCA_4804 SM00382 ATPases associated with a variety of cellular activities BCA_4812 SM00382 ATPases associated with a variety of cellular activities BCA_4812 SM00843 BCA_4812 BCA_4820 SM00849 Metallo-beta-lactamase superfamily BCA_4824 SM00642 Alpha-amylase domain BCA_4827 SM00420 helix_turn_helix, Deoxyribose operon repressor BCA_4828 SM00363 S4 RNA-binding domain BCA_4833 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCA_4838 SM01058 CarD-like/TRCF domain BCA_4845 SM00852 Probable molybdopterin binding domain BCA_4848 SM00729 Elongator protein 3, MiaB family, Radical SAM BCA_4852 SM00450 Rhodanese Homology Domain BCA_4870 SM00382 ATPases associated with a variety of cellular activities BCA_4874 SM00729 Elongator protein 3, MiaB family, Radical SAM BCA_4876 SM00382 ATPases associated with a variety of cellular activities BCA_4884 SM00014 Acid phosphatase homologues BCA_4887 SM00852 Probable molybdopterin binding domain BCA_4902 SM00420 helix_turn_helix, Deoxyribose operon repressor BCA_4902 SM01134 BCA_4902 BCA_4904 SM00387 Histidine kinase-like ATPases BCA_4905 SM00387 Histidine kinase-like ATPases BCA_4905 SM00388 His Kinase A (phosphoacceptor) domain BCA_4911 SM00382 ATPases associated with a variety of cellular activities BCA_4923 SM00947 Carbonic anhydrase BCA_4924 SM01234 BCA_4924 BCA_4929 SM00894 Excalibur calcium-binding domain BCA_4949 SM00899 BCA_4949 BCA_4952 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCA_4952 SM00387 Histidine kinase-like ATPases BCA_4952 SM00388 His Kinase A (phosphoacceptor) domain BCA_4953 SM00448 cheY-homologous receiver domain BCA_4953 SM00862 Transcriptional regulatory protein, C terminal BCA_4959 SM00046 Diacylglycerol kinase catalytic domain (presumed) BCA_4966 SM00342 helix_turn_helix, arabinose operon control protein BCA_4969 SM00382 ATPases associated with a variety of cellular activities BCA_4970 SM00342 helix_turn_helix, arabinose operon control protein BCA_4970 SM00871 Bacterial transcription activator, effector binding domain BCA_4971 SM00448 cheY-homologous receiver domain BCA_4971 SM00862 Transcriptional regulatory protein, C terminal BCA_4972 SM00387 Histidine kinase-like ATPases BCA_4975 SM00382 ATPases associated with a variety of cellular activities BCA_4979 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCA_4979 SM00866 BCA_4979 BCA_4985 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCA_4985 SM00387 Histidine kinase-like ATPases BCA_4985 SM00388 His Kinase A (phosphoacceptor) domain BCA_4986 SM00448 cheY-homologous receiver domain BCA_4986 SM00862 Transcriptional regulatory protein, C terminal BCA_4987 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BCA_4995 SM00357 Cold shock protein domain BCA_5002 SM00642 Alpha-amylase domain BCA_5037 SM00316 Ribosomal protein S1-like RNA-binding domain BCA_5039 SM00344 helix_turn_helix ASNC type BCA_5047 SM01298 BCA_5047 BCA_5048 SM00479 BCA_5048 BCA_5066 SM00871 Bacterial transcription activator, effector binding domain BCA_5076 SM00382 ATPases associated with a variety of cellular activities BCA_5089 SM00382 ATPases associated with a variety of cellular activities BCA_5099 SM00422 helix_turn_helix, mercury resistance BCA_5102 SM00855 Phosphoglycerate mutase family BCA_5104 SM00729 Elongator protein 3, MiaB family, Radical SAM BCA_5116 SM00382 ATPases associated with a variety of cellular activities BCA_5120 SM00382 ATPases associated with a variety of cellular activities BCA_5120 SM00930 BCA_5120 BCA_5125 SM00493 BCA_5125 BCA_5143 SM00530 Helix-turn-helix XRE-family like proteins BCA_5146 SM00849 Metallo-beta-lactamase superfamily BCA_5147 SM00382 ATPases associated with a variety of cellular activities BCA_5160 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BCA_5160 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCA_5176 SM00530 Helix-turn-helix XRE-family like proteins BCA_5181 SM00448 cheY-homologous receiver domain BCA_5181 SM00862 Transcriptional regulatory protein, C terminal BCA_5182 SM00387 Histidine kinase-like ATPases BCA_5182 SM00388 His Kinase A (phosphoacceptor) domain BCA_5186 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BCA_5186 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCA_5187 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BCA_5187 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCA_5191 SM00347 helix_turn_helix multiple antibiotic resistance protein BCA_5209 SM01276 BCA_5209 BCA_5216 SM00363 S4 RNA-binding domain BCA_5218 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain BCA_5219 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BCA_5226 SM00382 ATPases associated with a variety of cellular activities BCA_5231 SM00382 ATPases associated with a variety of cellular activities BCA_5235 SM00448 cheY-homologous receiver domain BCA_5235 SM00862 Transcriptional regulatory protein, C terminal BCA_5240 SM00316 Ribosomal protein S1-like RNA-binding domain BCA_5240 SM00357 Cold shock protein domain BCA_5240 SM00955 BCA_5240 BCA_5246 SM01192 BCA_5246 BCA_5246 SM01193 BCA_5246 BCA_5250 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BCA_5263 SM00857 Resolvase, N terminal domain BCA_5287 SM00028 Tetratricopeptide repeats BCA_5295 SM00487 DEAD-like helicases superfamily BCA_5295 SM00490 helicase superfamily c-terminal domain BCA_5298 SM00422 helix_turn_helix, mercury resistance BCA_5302 SM00530 Helix-turn-helix XRE-family like proteins BCA_5305 SM00422 helix_turn_helix, mercury resistance BCA_5309 SM00382 ATPases associated with a variety of cellular activities BCA_5311 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BCA_5311 SM00245 tail specific protease BCA_5313 SM00382 ATPases associated with a variety of cellular activities BCA_5318 SM00957 SecA DEAD-like domain BCA_5318 SM00958 SecA preprotein cross-linking domain BCA_5321 SM00357 Cold shock protein domain BCA_5323 SM00487 DEAD-like helicases superfamily BCA_5323 SM00490 helicase superfamily c-terminal domain BCA_5330 SM00984 UDP binding domain BCA_5333 SM00382 ATPases associated with a variety of cellular activities BCA_5334 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. BCA_5344 SM00850 LytTr DNA-binding domain BCA_5378 SM00287 Bacterial SH3 domain homologues BCA_5384 SM00487 DEAD-like helicases superfamily BCA_5384 SM00490 helicase superfamily c-terminal domain BCA_5394 SM00382 ATPases associated with a variety of cellular activities BCA_5396 SM00530 Helix-turn-helix XRE-family like proteins BCA_5401 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCA_5401 SM00387 Histidine kinase-like ATPases BCA_5401 SM00388 His Kinase A (phosphoacceptor) domain BCA_5402 SM00448 cheY-homologous receiver domain BCA_5402 SM00862 Transcriptional regulatory protein, C terminal BCA_5413 SM00984 UDP binding domain BCA_5429 SM00382 ATPases associated with a variety of cellular activities BCA_5430 SM00850 LytTr DNA-binding domain BCA_5446 SM00052 Putative diguanylate phosphodiesterase BCA_5446 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BCA_5446 SM00091 PAS domain BCA_5446 SM00267 diguanylate cyclase BCA_5450 SM00382 ATPases associated with a variety of cellular activities BCA_5466 SM00226 Low molecular weight phosphatase family BCA_5469 SM00903 Flavin reductase like domain BCA_5478 SM00937 BCA_5478 BCA_5481 SM00357 Cold shock protein domain BCA_5481 SM00382 ATPases associated with a variety of cellular activities BCA_5481 SM00959 Rho termination factor, N-terminal domain BCA_5486 SM00448 cheY-homologous receiver domain BCA_5496 SM00155 Phospholipase D. Active site motifs. BCA_5498 SM00052 Putative diguanylate phosphodiesterase BCA_5498 SM00267 diguanylate cyclase BCA_5500 SM00530 Helix-turn-helix XRE-family like proteins BCA_5502 SM00421 helix_turn_helix, Lux Regulon BCA_5502 SM00448 cheY-homologous receiver domain BCA_5505 SM00382 ATPases associated with a variety of cellular activities BCA_5513 SM00836 DALR anticodon binding domain BCA_5513 SM01016 Arginyl tRNA synthetase N terminal dom BCA_5522 SM00422 helix_turn_helix, mercury resistance BCA_5529 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BCA_5531 SM00382 ATPases associated with a variety of cellular activities BCA_5541 SM00936 Penicillin-binding protein 5, C-terminal domain BCA_5550 SM00986 Uracil DNA glycosylase superfamily BCA_5550 SM00987 UreE urease accessory protein, C-terminal domain BCA_5552 SM00382 ATPases associated with a variety of cellular activities BCA_5554 SM00354 helix_turn _helix lactose operon repressor BCA_5561 SM00100 Cyclic nucleotide-monophosphate binding domain BCA_5563 SM00421 helix_turn_helix, Lux Regulon BCA_5563 SM00448 cheY-homologous receiver domain BCA_5564 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BCA_5566 SM00267 diguanylate cyclase BCA_5569 SM00448 cheY-homologous receiver domain BCA_5569 SM00850 LytTr DNA-binding domain BCA_5576 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BCA_5581 SM00382 ATPases associated with a variety of cellular activities BCA_5592 SM00448 cheY-homologous receiver domain BCA_5592 SM00850 LytTr DNA-binding domain BCA_5593 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BCA_5593 SM00387 Histidine kinase-like ATPases BCA_5605 SM00487 DEAD-like helicases superfamily BCA_5605 SM00490 helicase superfamily c-terminal domain BCA_5607 SM01240 BCA_5607 BCA_5612 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BCA_5613 SM00849 Metallo-beta-lactamase superfamily BCA_5616 SM00091 PAS domain BCA_5616 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCA_5616 SM00387 Histidine kinase-like ATPases BCA_5616 SM00388 His Kinase A (phosphoacceptor) domain BCA_5617 SM00448 cheY-homologous receiver domain BCA_5617 SM00862 Transcriptional regulatory protein, C terminal BCA_5622 SM00788 Adenylosuccinate synthetase BCA_5625 SM00267 diguanylate cyclase BCA_5634 SM00470 ParB-like nuclease domain BCA_5636 SM00470 ParB-like nuclease domain BCA_5638 SM01228 BCA_5638 BCA_5640 SM00393 Putative single-stranded nucleic acids-binding domain BCA_5640 SM01245 BCA_5640 BCA_A0009 SM00487 DEAD-like helicases superfamily BCA_A0031 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BCA_A0045 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCA_A0046 SM00843 BCA_A0046 BCA_A0049 SM00864 Tubulin/FtsZ family, GTPase domain BCA_A0094 SM00854 Bacterial capsule synthesis protein PGA_cap BCA_A0104 SM00725 NEAr Transporter domain BCA_A0108 SM00014 Acid phosphatase homologues BCA_A0114 SM00984 UDP binding domain BCA_A0144 SM00758 BCA_A0144 BCA_A0146 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCA_A0148 SM00758 BCA_A0148 BCA_A0149 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCA_A0175 SM00860 SMI1 / KNR4 family BCA_A0200 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCA_A0204 SM00318 Staphylococcal nuclease homologues