AS54_1041	PWY-5669	phosphatidylethanolamine biosynthesis I
AS54_106	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AS54_106	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AS54_106	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AS54_106	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AS54_106	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AS54_106	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AS54_1105	PWY-4261	glycerol degradation I
AS54_1106	PWY-4261	glycerol degradation I
AS54_1106	PWY-6118	glycerol-3-phosphate shuttle
AS54_1106	PWY-6952	glycerophosphodiester degradation
AS54_1113	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AS54_1113	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AS54_1113	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AS54_1113	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AS54_1158	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AS54_1158	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AS54_1158	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AS54_1158	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AS54_1159	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
AS54_1159	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AS54_1159	PWY-7766	AS54_1159
AS54_1161	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AS54_1182	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AS54_1182	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AS54_121	PWY-7560	methylerythritol phosphate pathway II
AS54_1212	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AS54_1212	PWY-7118	chitin degradation to ethanol
AS54_1212	PWY-7294	xylose degradation IV
AS54_1212	PWY-7295	L-arabinose degradation IV
AS54_1212	PWY-7854	AS54_1212
AS54_1213	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AS54_1234	PWY-3341	L-proline biosynthesis III
AS54_1234	PWY-4981	L-proline biosynthesis II (from arginine)
AS54_1234	PWY-6344	L-ornithine degradation II (Stickland reaction)
AS54_1234	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AS54_125	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AS54_1258	PWY-4381	fatty acid biosynthesis initiation I
AS54_127	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
AS54_1284	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AS54_1284	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AS54_1284	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
AS54_1288	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AS54_1288	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AS54_1288	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AS54_1288	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AS54_1299	PWY-3221	dTDP-L-rhamnose biosynthesis II
AS54_1299	PWY-6808	dTDP-D-forosamine biosynthesis
AS54_1299	PWY-6942	dTDP-D-desosamine biosynthesis
AS54_1299	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AS54_1299	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
AS54_1299	PWY-6974	dTDP-L-olivose biosynthesis
AS54_1299	PWY-6976	dTDP-L-mycarose biosynthesis
AS54_1299	PWY-7104	dTDP-L-megosamine biosynthesis
AS54_1299	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
AS54_1299	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
AS54_1299	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AS54_1299	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
AS54_1299	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
AS54_1299	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
AS54_1299	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
AS54_1299	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
AS54_1299	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
AS54_1299	PWY-7688	AS54_1299
AS54_1299	PWY-7814	AS54_1299
AS54_1301	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AS54_1301	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AS54_1301	PWY-5989	stearate biosynthesis II (bacteria and plants)
AS54_1301	PWY-6113	superpathway of mycolate biosynthesis
AS54_1301	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AS54_1301	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AS54_1301	PWY-7663	gondoate biosynthesis (anaerobic)
AS54_1301	PWY-7664	oleate biosynthesis IV (anaerobic)
AS54_1301	PWY-7858	AS54_1301
AS54_1301	PWYG-321	mycolate biosynthesis
AS54_1315	PWY-5958	acridone alkaloid biosynthesis
AS54_1315	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AS54_1315	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AS54_1316	PWY-5958	acridone alkaloid biosynthesis
AS54_1316	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AS54_1316	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AS54_1333	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AS54_1334	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AS54_1368	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AS54_1368	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AS54_1406	PWY-5676	acetyl-CoA fermentation to butanoate II
AS54_1406	PWY-5741	ethylmalonyl-CoA pathway
AS54_1406	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AS54_1406	PWY-7948	AS54_1406
AS54_1416	PWY-6832	2-aminoethylphosphonate degradation II
AS54_142	PWY-6599	guanine and guanosine salvage II
AS54_142	PWY-6609	adenine and adenosine salvage III
AS54_142	PWY-6610	adenine and adenosine salvage IV
AS54_142	PWY-6620	guanine and guanosine salvage
AS54_1421	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
AS54_1431	PWY-6703	preQ<sub>0</sub> biosynthesis
AS54_1433	PWY-6703	preQ<sub>0</sub> biosynthesis
AS54_1434	PWY-6700	queuosine biosynthesis
AS54_144	PWY-3961	phosphopantothenate biosynthesis II
AS54_1442	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AS54_1442	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AS54_1442	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AS54_1442	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AS54_1442	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AS54_1442	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AS54_1442	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AS54_1442	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AS54_1444	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AS54_1444	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AS54_1444	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AS54_1444	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AS54_1444	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AS54_1444	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AS54_1444	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AS54_1444	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AS54_1445	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AS54_1445	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AS54_1445	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AS54_1445	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AS54_1445	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AS54_1445	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AS54_1445	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AS54_1445	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AS54_1458	PWY-723	alkylnitronates degradation
AS54_146	PWY-6936	seleno-amino acid biosynthesis
AS54_147	PWY-5958	acridone alkaloid biosynthesis
AS54_147	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AS54_147	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AS54_1474	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
AS54_148	PWY-5958	acridone alkaloid biosynthesis
AS54_148	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AS54_148	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AS54_1487	PWY-5057	L-valine degradation II
AS54_1487	PWY-5076	L-leucine degradation III
AS54_1487	PWY-5078	L-isoleucine degradation II
AS54_1487	PWY-5101	L-isoleucine biosynthesis II
AS54_1487	PWY-5103	L-isoleucine biosynthesis III
AS54_1487	PWY-5104	L-isoleucine biosynthesis IV
AS54_1487	PWY-5108	L-isoleucine biosynthesis V
AS54_1487	PWY-7767	AS54_1487
AS54_1488	PWY-5101	L-isoleucine biosynthesis II
AS54_1488	PWY-5103	L-isoleucine biosynthesis III
AS54_1488	PWY-5104	L-isoleucine biosynthesis IV
AS54_1488	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AS54_1488	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AS54_1488	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AS54_1488	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AS54_1489	PWY-5101	L-isoleucine biosynthesis II
AS54_1489	PWY-5103	L-isoleucine biosynthesis III
AS54_1489	PWY-5104	L-isoleucine biosynthesis IV
AS54_1489	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AS54_1489	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AS54_1489	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AS54_1489	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AS54_1490	PWY-5103	L-isoleucine biosynthesis III
AS54_1490	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AS54_1491	PWY-6871	3-methylbutanol biosynthesis
AS54_1492	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AS54_150	PWY-6614	tetrahydrofolate biosynthesis
AS54_1507	PWY-5669	phosphatidylethanolamine biosynthesis I
AS54_151	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AS54_151	PWY-6148	tetrahydromethanopterin biosynthesis
AS54_151	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AS54_151	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AS54_1510	PWY-2941	L-lysine biosynthesis II
AS54_1510	PWY-2942	L-lysine biosynthesis III
AS54_1510	PWY-5097	L-lysine biosynthesis VI
AS54_1513	PWY-5278	sulfite oxidation III
AS54_1513	PWY-5340	sulfate activation for sulfonation
AS54_1513	PWY-6683	sulfate reduction III (assimilatory)
AS54_1513	PWY-6932	selenate reduction
AS54_1514	PWY-5340	sulfate activation for sulfonation
AS54_1515	PWY-6683	sulfate reduction III (assimilatory)
AS54_1517	PWY-5194	siroheme biosynthesis
AS54_1517	PWY-5196	factor 430 biosynthesis
AS54_1517	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AS54_1518	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AS54_1519	PWY-5194	siroheme biosynthesis
AS54_1519	PWY-5196	factor 430 biosynthesis
AS54_1519	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AS54_152	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AS54_152	PWY-6148	tetrahydromethanopterin biosynthesis
AS54_152	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AS54_152	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AS54_152	PWY-7852	AS54_152
AS54_152	PWY-7853	AS54_152
AS54_1546	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AS54_1546	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AS54_1546	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AS54_1546	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AS54_1554	PWY-4202	arsenate detoxification I (glutaredoxin)
AS54_1554	PWY-5532	adenosine nucleotides degradation IV
AS54_1554	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AS54_1554	PWY-6608	guanosine nucleotides degradation III
AS54_1554	PWY-6609	adenine and adenosine salvage III
AS54_1554	PWY-6611	adenine and adenosine salvage V
AS54_1554	PWY-6620	guanine and guanosine salvage
AS54_1554	PWY-6627	salinosporamide A biosynthesis
AS54_1554	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
AS54_1554	PWY-7179	purine deoxyribonucleosides degradation I
AS54_1554	PWY-7179-1	purine deoxyribonucleosides degradation
AS54_1560	PWY-6854	ethylene biosynthesis III (microbes)
AS54_1561	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AS54_1561	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AS54_1589	PWY-7205	CMP phosphorylation
AS54_1591	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
AS54_1591	PWY-6174	mevalonate pathway II (archaea)
AS54_1591	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
AS54_1591	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
AS54_1591	PWY-7102	bisabolene biosynthesis
AS54_1591	PWY-7391	isoprene biosynthesis II (engineered)
AS54_1591	PWY-7524	mevalonate pathway III (archaea)
AS54_1591	PWY-7560	methylerythritol phosphate pathway II
AS54_1591	PWY-922	mevalonate pathway I
AS54_1597	PWY-5667	CDP-diacylglycerol biosynthesis I
AS54_1597	PWY-5981	CDP-diacylglycerol biosynthesis III
AS54_1597	PWY-7902	AS54_1597
AS54_1603	PWY-5663	tetrahydrobiopterin biosynthesis I
AS54_1603	PWY-5664	tetrahydrobiopterin biosynthesis II
AS54_1603	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AS54_1603	PWY-6703	preQ<sub>0</sub> biosynthesis
AS54_1603	PWY-6983	tetrahydrobiopterin biosynthesis III
AS54_1603	PWY-7442	drosopterin and aurodrosopterin biosynthesis
AS54_1603	PWY-7852	AS54_1603
AS54_1604	PWY-5807	heptaprenyl diphosphate biosynthesis
AS54_1605	PWY-5839	menaquinol-7 biosynthesis
AS54_1605	PWY-5844	menaquinol-9 biosynthesis
AS54_1605	PWY-5849	menaquinol-6 biosynthesis
AS54_1605	PWY-5890	menaquinol-10 biosynthesis
AS54_1605	PWY-5891	menaquinol-11 biosynthesis
AS54_1605	PWY-5892	menaquinol-12 biosynthesis
AS54_1605	PWY-5895	menaquinol-13 biosynthesis
AS54_1606	PWY-5807	heptaprenyl diphosphate biosynthesis
AS54_1607	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AS54_1607	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AS54_1607	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AS54_1607	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AS54_1607	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AS54_1607	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AS54_1607	PWY-7205	CMP phosphorylation
AS54_1607	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AS54_1607	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AS54_1607	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AS54_1607	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AS54_1607	PWY-7224	purine deoxyribonucleosides salvage
AS54_1607	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AS54_1607	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AS54_1608	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AS54_1609	PWY-6164	3-dehydroquinate biosynthesis I
AS54_1624	PWY-2941	L-lysine biosynthesis II
AS54_1624	PWY-2942	L-lysine biosynthesis III
AS54_1624	PWY-5097	L-lysine biosynthesis VI
AS54_1629	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AS54_1629	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AS54_1631	PWY-6654	phosphopantothenate biosynthesis III
AS54_1633	PWY-5155	&beta;-alanine biosynthesis III
AS54_1641	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AS54_1641	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AS54_1641	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AS54_1641	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AS54_1658	PWY-7799	AS54_1658
AS54_1658	PWY-7800	AS54_1658
AS54_1736	PWY-7980	AS54_1736
AS54_180	PWY-7560	methylerythritol phosphate pathway II
AS54_1803	PWY-5392	reductive TCA cycle II
AS54_1803	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AS54_1803	PWY-5690	TCA cycle II (plants and fungi)
AS54_1803	PWY-5913	TCA cycle VI (obligate autotrophs)
AS54_1803	PWY-6728	methylaspartate cycle
AS54_1803	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AS54_1803	PWY-7254	TCA cycle VII (acetate-producers)
AS54_1803	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AS54_181	PWY-7560	methylerythritol phosphate pathway II
AS54_182	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AS54_183	PWY-6936	seleno-amino acid biosynthesis
AS54_183	PWY-7274	D-cycloserine biosynthesis
AS54_183	PWY-7870	AS54_183
AS54_1830	PWY-5392	reductive TCA cycle II
AS54_1830	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AS54_1830	PWY-5690	TCA cycle II (plants and fungi)
AS54_1830	PWY-5913	TCA cycle VI (obligate autotrophs)
AS54_1830	PWY-6728	methylaspartate cycle
AS54_1830	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AS54_1830	PWY-7254	TCA cycle VII (acetate-producers)
AS54_1830	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AS54_1840	PWY-2941	L-lysine biosynthesis II
AS54_1840	PWY-2942	L-lysine biosynthesis III
AS54_1840	PWY-5097	L-lysine biosynthesis VI
AS54_1840	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
AS54_1840	PWY-6559	spermidine biosynthesis II
AS54_1840	PWY-6562	norspermidine biosynthesis
AS54_1840	PWY-7153	grixazone biosynthesis
AS54_1840	PWY-7977	AS54_1840
AS54_1855	PWY-4381	fatty acid biosynthesis initiation I
AS54_1859	PWY-6936	seleno-amino acid biosynthesis
AS54_1875	PWY-5057	L-valine degradation II
AS54_1875	PWY-5076	L-leucine degradation III
AS54_1875	PWY-5078	L-isoleucine degradation II
AS54_1875	PWY-5101	L-isoleucine biosynthesis II
AS54_1875	PWY-5103	L-isoleucine biosynthesis III
AS54_1875	PWY-5104	L-isoleucine biosynthesis IV
AS54_1875	PWY-5108	L-isoleucine biosynthesis V
AS54_1875	PWY-7767	AS54_1875
AS54_1876	PWY-5101	L-isoleucine biosynthesis II
AS54_1876	PWY-5103	L-isoleucine biosynthesis III
AS54_1876	PWY-5104	L-isoleucine biosynthesis IV
AS54_1876	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AS54_1876	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AS54_1876	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AS54_1876	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AS54_1877	PWY-5101	L-isoleucine biosynthesis II
AS54_1877	PWY-5103	L-isoleucine biosynthesis III
AS54_1877	PWY-5104	L-isoleucine biosynthesis IV
AS54_1877	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AS54_1877	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AS54_1877	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AS54_1877	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AS54_1878	PWY-5103	L-isoleucine biosynthesis III
AS54_1878	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AS54_1879	PWY-5101	L-isoleucine biosynthesis II
AS54_1879	PWY-5103	L-isoleucine biosynthesis III
AS54_1879	PWY-5104	L-isoleucine biosynthesis IV
AS54_1879	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AS54_1957	PWY-7883	AS54_1957
AS54_1974	PWY-6654	phosphopantothenate biosynthesis III
AS54_1982	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
AS54_1984	PWY-7181	pyrimidine deoxyribonucleosides degradation
AS54_1985	PWY-6556	pyrimidine ribonucleosides salvage II
AS54_1985	PWY-7181	pyrimidine deoxyribonucleosides degradation
AS54_1985	PWY-7193	pyrimidine ribonucleosides salvage I
AS54_1985	PWY-7199	pyrimidine deoxyribonucleosides salvage
AS54_2008	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AS54_2010	PWY-5481	pyruvate fermentation to lactate
AS54_2010	PWY-6901	superpathway of glucose and xylose degradation
AS54_2015	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AS54_2017	PWY-4381	fatty acid biosynthesis initiation I
AS54_2049	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AS54_2049	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AS54_2052	PWY-702	L-methionine biosynthesis II
AS54_2123	PWY-0	putrescine degradation III
AS54_2123	PWY-6117	spermine and spermidine degradation I
AS54_2123	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AS54_2162	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AS54_2168	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
AS54_2168	PWY-6167	flavin biosynthesis II (archaea)
AS54_2168	PWY-6168	flavin biosynthesis III (fungi)
AS54_2168	PWY-7863	AS54_2168
AS54_2169	PWY-5647	2-nitrobenzoate degradation I
AS54_2169	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
AS54_2169	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
AS54_2169	PWY-6505	L-tryptophan degradation XII (Geobacillus)
AS54_2174	PWY-5162	2-oxopentenoate degradation
AS54_2174	PWY-5436	L-threonine degradation IV
AS54_2174	PWY-5480	pyruvate fermentation to ethanol I
AS54_2174	PWY-6587	pyruvate fermentation to ethanol III
AS54_2174	PWY-7085	triethylamine degradation
AS54_2174	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
AS54_2175	PWY-5162	2-oxopentenoate degradation
AS54_2181	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AS54_2215	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
AS54_2215	PWY-2161	folate polyglutamylation
AS54_2215	PWY-2201	folate transformations I
AS54_2215	PWY-3841	folate transformations II
AS54_2233	PWY-6748	nitrate reduction VII (denitrification)
AS54_2234	PWY-6748	nitrate reduction VII (denitrification)
AS54_2238	PWY-6823	molybdenum cofactor biosynthesis
AS54_2240	PWY-6823	molybdenum cofactor biosynthesis
AS54_2241	PWY-6823	molybdenum cofactor biosynthesis
AS54_2241	PWY-7887	AS54_2241
AS54_2245	PWY-5194	siroheme biosynthesis
AS54_2245	PWY-5196	factor 430 biosynthesis
AS54_2245	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AS54_2246	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AS54_2247	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AS54_2247	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AS54_2247	PWY-5194	siroheme biosynthesis
AS54_2247	PWY-5196	factor 430 biosynthesis
AS54_2247	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AS54_2249	PWY-6683	sulfate reduction III (assimilatory)
AS54_225	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AS54_226	PWY-7799	AS54_226
AS54_226	PWY-7800	AS54_226
AS54_23	PWY-6854	ethylene biosynthesis III (microbes)
AS54_2324	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AS54_2324	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AS54_2338	PWY-3841	folate transformations II
AS54_2338	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AS54_2338	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AS54_2338	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AS54_2338	PWY-7199	pyrimidine deoxyribonucleosides salvage
AS54_2338	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AS54_2339	PWY-3841	folate transformations II
AS54_2339	PWY-6614	tetrahydrofolate biosynthesis
AS54_2342	PWY-5667	CDP-diacylglycerol biosynthesis I
AS54_2342	PWY-5981	CDP-diacylglycerol biosynthesis III
AS54_2342	PWY-6453	stigma estolide biosynthesis
AS54_2342	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AS54_2342	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
AS54_2342	PWY-7587	oleate biosynthesis III (cyanobacteria)
AS54_2342	PWY-7589	palmitoleate biosynthesis III (cyanobacteria)
AS54_2342	PWY-7782	AS54_2342
AS54_240	PWY-7883	AS54_240
AS54_2431	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AS54_2431	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AS54_2431	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AS54_2431	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AS54_2437	PWY-5747	2-methylcitrate cycle II
AS54_2440	PWY-5642	2,4-dinitrotoluene degradation
AS54_2451	PWY-5901	2,3-dihydroxybenzoate biosynthesis
AS54_2452	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AS54_2452	PWY-5901	2,3-dihydroxybenzoate biosynthesis
AS54_2452	PWY-6406	salicylate biosynthesis I
AS54_2458	PWY-6012	acyl carrier protein metabolism I
AS54_2458	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AS54_2458	PWY-6289	petrobactin biosynthesis
AS54_2501	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AS54_2512	PWY-2941	L-lysine biosynthesis II
AS54_2512	PWY-2942	L-lysine biosynthesis III
AS54_2512	PWY-5097	L-lysine biosynthesis VI
AS54_2512	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AS54_2512	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
AS54_2512	PWY-6559	spermidine biosynthesis II
AS54_2512	PWY-6562	norspermidine biosynthesis
AS54_2512	PWY-7153	grixazone biosynthesis
AS54_2512	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AS54_2512	PWY-7977	AS54_2512
AS54_2522	PWY-7883	AS54_2522
AS54_2542	PWY-7883	AS54_2542
AS54_2547	PWY-7511	protein ubiquitylation
AS54_2579	PWY-1622	formaldehyde assimilation I (serine pathway)
AS54_2579	PWY-5484	glycolysis II (from fructose 6-phosphate)
AS54_2589	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AS54_2589	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AS54_259	PWY-31	canavanine degradation
AS54_259	PWY-4984	urea cycle
AS54_259	PWY-6305	putrescine biosynthesis IV
AS54_259	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AS54_2602	PWY-5642	2,4-dinitrotoluene degradation
AS54_2606	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AS54_262	PWY-6749	CMP-legionaminate biosynthesis I
AS54_263	PWY-6749	CMP-legionaminate biosynthesis I
AS54_2636	PWY-4381	fatty acid biosynthesis initiation I
AS54_2636	PWY-5743	3-hydroxypropanoate cycle
AS54_2636	PWY-5744	glyoxylate assimilation
AS54_2636	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AS54_2636	PWY-6722	candicidin biosynthesis
AS54_2637	PWY-5108	L-isoleucine biosynthesis V
AS54_2637	PWY-5132	humulone biosynthesis
AS54_2637	PWY-5133	cohumulone biosynthesis
AS54_2637	PWY-6672	<i>cis</i>-genanyl-CoA degradation
AS54_2637	PWY-7118	chitin degradation to ethanol
AS54_2637	PWY-7857	AS54_2637
AS54_2648	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AS54_2648	PWY-6153	autoinducer AI-2 biosynthesis I
AS54_2648	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
AS54_267	PWY-4261	glycerol degradation I
AS54_267	PWY-5530	sorbitol biosynthesis II
AS54_2681	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AS54_2698	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AS54_2698	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AS54_2698	PWY-7953	AS54_2698
AS54_2699	PWY-6899	base-degraded thiamin salvage
AS54_2699	PWY-7356	thiamin salvage IV (yeast)
AS54_27	PWY-3821	galactose degradation III
AS54_27	PWY-6317	galactose degradation I (Leloir pathway)
AS54_27	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
AS54_27	PWY-6527	stachyose degradation
AS54_27	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
AS54_27	PWY-7344	UDP-D-galactose biosynthesis
AS54_2722	PWY-5331	taurine biosynthesis
AS54_2727	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AS54_2727	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AS54_2786	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
AS54_2803	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AS54_2803	PWY-622	starch biosynthesis
AS54_2803	PWY-7900	AS54_2803
AS54_2828	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
AS54_2828	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
AS54_2828	PWY-7717	AS54_2828
AS54_2828	PWY-7733	AS54_2828
AS54_2828	PWY-7734	AS54_2828
AS54_2828	PWY-7765	AS54_2828
AS54_2829	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
AS54_2829	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
AS54_2846	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AS54_2846	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AS54_2866	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AS54_2866	PWY-5723	Rubisco shunt
AS54_2876	PWY-7883	AS54_2876
AS54_2896	PWY-7805	AS54_2896
AS54_2896	PWY-7807	AS54_2896
AS54_2902	PWY-2941	L-lysine biosynthesis II
AS54_2902	PWY-2942	L-lysine biosynthesis III
AS54_2902	PWY-5097	L-lysine biosynthesis VI
AS54_2905	PWY-4261	glycerol degradation I
AS54_2905	PWY-6118	glycerol-3-phosphate shuttle
AS54_2905	PWY-6952	glycerophosphodiester degradation
AS54_2935	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AS54_2935	PWY-6153	autoinducer AI-2 biosynthesis I
AS54_2935	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
AS54_2936	PWY-7815	AS54_2936
AS54_2936	PWY-7816	AS54_2936
AS54_2936	PWY-7819	AS54_2936
AS54_2966	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AS54_2966	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AS54_2966	PWY-5989	stearate biosynthesis II (bacteria and plants)
AS54_2966	PWY-5994	palmitate biosynthesis I (animals and fungi)
AS54_2966	PWY-6113	superpathway of mycolate biosynthesis
AS54_2966	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AS54_2966	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AS54_2966	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AS54_2966	PWY-7663	gondoate biosynthesis (anaerobic)
AS54_2966	PWY-7664	oleate biosynthesis IV (anaerobic)
AS54_2966	PWY-7858	AS54_2966
AS54_2966	PWYG-321	mycolate biosynthesis
AS54_2967	PWY-3961	phosphopantothenate biosynthesis II
AS54_301	PWY-3341	L-proline biosynthesis III
AS54_301	PWY-4981	L-proline biosynthesis II (from arginine)
AS54_301	PWY-6344	L-ornithine degradation II (Stickland reaction)
AS54_3011	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AS54_3012	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
AS54_3014	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AS54_3015	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AS54_3015	PWY-3461	L-tyrosine biosynthesis II
AS54_3015	PWY-3462	L-phenylalanine biosynthesis II
AS54_3015	PWY-6120	L-tyrosine biosynthesis III
AS54_3015	PWY-6164	3-dehydroquinate biosynthesis I
AS54_3015	PWY-6627	salinosporamide A biosynthesis
AS54_3015	PWY-7626	bacilysin biosynthesis
AS54_3015	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AS54_3031	PWY-7254	TCA cycle VII (acetate-producers)
AS54_3037	PWY-4261	glycerol degradation I
AS54_3049	PWY-3341	L-proline biosynthesis III
AS54_3049	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AS54_3050	PWY-3341	L-proline biosynthesis III
AS54_3050	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AS54_3051	PWY-3341	L-proline biosynthesis III
AS54_3051	PWY-4981	L-proline biosynthesis II (from arginine)
AS54_3051	PWY-6344	L-ornithine degradation II (Stickland reaction)
AS54_3057	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AS54_3057	PWY-5491	diethylphosphate degradation
AS54_3061	PWY-6303	methyl indole-3-acetate interconversion
AS54_3061	PWY-6857	retinol biosynthesis
AS54_3086	PWY-6610	adenine and adenosine salvage IV
AS54_3142	PWY-7942	AS54_3142
AS54_3146	PWY-4041	&gamma;-glutamyl cycle
AS54_3146	PWY-7942	AS54_3146
AS54_3148	PWY-4041	&gamma;-glutamyl cycle
AS54_3148	PWY-7942	AS54_3148
AS54_3209	PWY-5839	menaquinol-7 biosynthesis
AS54_3209	PWY-5851	demethylmenaquinol-9 biosynthesis
AS54_3209	PWY-5852	demethylmenaquinol-8 biosynthesis I
AS54_3209	PWY-5853	demethylmenaquinol-6 biosynthesis I
AS54_3209	PWY-5890	menaquinol-10 biosynthesis
AS54_3209	PWY-5891	menaquinol-11 biosynthesis
AS54_3209	PWY-5892	menaquinol-12 biosynthesis
AS54_3209	PWY-5895	menaquinol-13 biosynthesis
AS54_3241	PWY-5451	acetone degradation I (to methylglyoxal)
AS54_3241	PWY-5665	vanillin biosynthesis I
AS54_3241	PWY-6398	melatonin degradation I
AS54_3241	PWY-6992	1,5-anhydrofructose degradation
AS54_3241	PWY-7466	acetone degradation III (to propane-1,2-diol)
AS54_3241	PWY-7826	AS54_3241
AS54_3261	PWY-4381	fatty acid biosynthesis initiation I
AS54_3328	PWY-6409	pyoverdine I biosynthesis
AS54_3328	PWY-6562	norspermidine biosynthesis
AS54_3328	PWY-761	rhizobactin 1021 biosynthesis
AS54_3328	PWY-7855	AS54_3328
AS54_3328	PWY-7988	AS54_3328
AS54_3401	PWY-1042	glycolysis IV (plant cytosol)
AS54_3401	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AS54_3401	PWY-5484	glycolysis II (from fructose 6-phosphate)
AS54_3401	PWY-5723	Rubisco shunt
AS54_3401	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AS54_3401	PWY-6886	1-butanol autotrophic biosynthesis
AS54_3401	PWY-6901	superpathway of glucose and xylose degradation
AS54_3401	PWY-7003	glycerol degradation to butanol
AS54_3401	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AS54_3401	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AS54_343	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AS54_343	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AS54_343	PWY-7953	AS54_343
AS54_344	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AS54_344	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AS54_344	PWY-7953	AS54_344
AS54_3446	PWY-4261	glycerol degradation I
AS54_3446	PWY-5530	sorbitol biosynthesis II
AS54_3448	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AS54_3448	PWY-5723	Rubisco shunt
AS54_3450	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AS54_3450	PWY-5723	Rubisco shunt
AS54_3450	PWY-6891	thiazole biosynthesis II (Bacillus)
AS54_3450	PWY-6892	thiazole biosynthesis I (E. coli)
AS54_3450	PWY-6901	superpathway of glucose and xylose degradation
AS54_3450	PWY-7560	methylerythritol phosphate pathway II
AS54_3451	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AS54_3463	PWY-6174	mevalonate pathway II (archaea)
AS54_3463	PWY-7391	isoprene biosynthesis II (engineered)
AS54_3463	PWY-7524	mevalonate pathway III (archaea)
AS54_3463	PWY-922	mevalonate pathway I
AS54_348	PWY-6012	acyl carrier protein metabolism I
AS54_348	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AS54_348	PWY-6289	petrobactin biosynthesis
AS54_3499	PWY-3781	aerobic respiration I (cytochrome c)
AS54_3499	PWY-4521	arsenite oxidation I (respiratory)
AS54_3499	PWY-6692	Fe(II) oxidation
AS54_3499	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AS54_350	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AS54_3616	PWY-4983	L-citrulline-nitric oxide cycle
AS54_3616	PWY-4984	urea cycle
AS54_3616	PWY-5	canavanine biosynthesis
AS54_3616	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AS54_3616	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AS54_3622	PWY-5367	petroselinate biosynthesis
AS54_3622	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AS54_3622	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AS54_3622	PWY-5989	stearate biosynthesis II (bacteria and plants)
AS54_3622	PWY-5994	palmitate biosynthesis I (animals and fungi)
AS54_3622	PWY-6113	superpathway of mycolate biosynthesis
AS54_3622	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AS54_3622	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AS54_3622	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AS54_3622	PWY-7663	gondoate biosynthesis (anaerobic)
AS54_3622	PWY-7664	oleate biosynthesis IV (anaerobic)
AS54_3622	PWY-7858	AS54_3622
AS54_3622	PWYG-321	mycolate biosynthesis
AS54_3632	PWY-6823	molybdenum cofactor biosynthesis
AS54_3632	PWY-7887	AS54_3632
AS54_3633	PWY-6823	molybdenum cofactor biosynthesis
AS54_3636	PWY-6823	molybdenum cofactor biosynthesis
AS54_3640	PWY-1881	formate oxidation to CO<sub>2</sub>
AS54_3640	PWY-5497	purine nucleobases degradation II (anaerobic)
AS54_3640	PWY-6696	oxalate degradation III
AS54_3640	PWY-7985	AS54_3640
AS54_3669	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AS54_3669	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AS54_3669	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AS54_3716	PWY-5028	L-histidine degradation II
AS54_3716	PWY-5030	L-histidine degradation III
AS54_3717	PWY-5028	L-histidine degradation II
AS54_3717	PWY-5030	L-histidine degradation III
AS54_3718	PWY-5028	L-histidine degradation II
AS54_3718	PWY-5030	L-histidine degradation III
AS54_3749	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AS54_3749	PWY-5723	Rubisco shunt
AS54_3749	PWY-6891	thiazole biosynthesis II (Bacillus)
AS54_3749	PWY-6892	thiazole biosynthesis I (E. coli)
AS54_3749	PWY-6901	superpathway of glucose and xylose degradation
AS54_3749	PWY-7560	methylerythritol phosphate pathway II
AS54_3761	PWY-381	nitrate reduction II (assimilatory)
AS54_3761	PWY-5675	nitrate reduction V (assimilatory)
AS54_3761	PWY-6549	L-glutamine biosynthesis III
AS54_3761	PWY-6963	ammonia assimilation cycle I
AS54_3761	PWY-6964	ammonia assimilation cycle II
AS54_3771	PWY-2781	<i>cis</i>-zeatin biosynthesis
AS54_3782	PWY-6855	chitin degradation I (archaea)
AS54_3782	PWY-6902	chitin degradation II
AS54_3782	PWY-7822	AS54_3782
AS54_3810	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AS54_3810	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AS54_3810	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AS54_3810	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AS54_3835	PWY-5392	reductive TCA cycle II
AS54_3835	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AS54_3836	PWY-7533	gliotoxin biosynthesis
AS54_384	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AS54_3842	PWY-5269	cardiolipin biosynthesis II
AS54_3842	PWY-5668	cardiolipin biosynthesis I
AS54_3842	PWY-7817	AS54_3842
AS54_3858	PWY-2941	L-lysine biosynthesis II
AS54_3858	PWY-2942	L-lysine biosynthesis III
AS54_3858	PWY-5097	L-lysine biosynthesis VI
AS54_3859	PWY-2941	L-lysine biosynthesis II
AS54_3859	PWY-2942	L-lysine biosynthesis III
AS54_3859	PWY-5097	L-lysine biosynthesis VI
AS54_3859	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
AS54_3859	PWY-6559	spermidine biosynthesis II
AS54_3859	PWY-6562	norspermidine biosynthesis
AS54_3859	PWY-7153	grixazone biosynthesis
AS54_3859	PWY-7977	AS54_3859
AS54_3860	PWY-2941	L-lysine biosynthesis II
AS54_3860	PWY-2942	L-lysine biosynthesis III
AS54_3860	PWY-5097	L-lysine biosynthesis VI
AS54_3860	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AS54_3860	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
AS54_3860	PWY-6559	spermidine biosynthesis II
AS54_3860	PWY-6562	norspermidine biosynthesis
AS54_3860	PWY-7153	grixazone biosynthesis
AS54_3860	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AS54_3860	PWY-7977	AS54_3860
AS54_3868	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
AS54_3868	PWY-6167	flavin biosynthesis II (archaea)
AS54_3868	PWY-6168	flavin biosynthesis III (fungi)
AS54_3868	PWY-7863	AS54_3868
AS54_3883	PWY-7560	methylerythritol phosphate pathway II
AS54_3884	PWY-5667	CDP-diacylglycerol biosynthesis I
AS54_3884	PWY-5981	CDP-diacylglycerol biosynthesis III
AS54_3884	PWY-7817	AS54_3884
AS54_3897	PWY-5392	reductive TCA cycle II
AS54_3897	PWY-5537	pyruvate fermentation to acetate V
AS54_3897	PWY-5538	pyruvate fermentation to acetate VI
AS54_3897	PWY-5690	TCA cycle II (plants and fungi)
AS54_3897	PWY-5913	TCA cycle VI (obligate autotrophs)
AS54_3897	PWY-6728	methylaspartate cycle
AS54_3897	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AS54_3897	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AS54_3898	PWY-5392	reductive TCA cycle II
AS54_3898	PWY-5537	pyruvate fermentation to acetate V
AS54_3898	PWY-5538	pyruvate fermentation to acetate VI
AS54_3898	PWY-5690	TCA cycle II (plants and fungi)
AS54_3898	PWY-5913	TCA cycle VI (obligate autotrophs)
AS54_3898	PWY-6728	methylaspartate cycle
AS54_3898	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AS54_3898	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AS54_3903	PWY-6829	tRNA methylation (yeast)
AS54_3903	PWY-7285	methylwyosine biosynthesis
AS54_3903	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
AS54_3913	PWY-5367	petroselinate biosynthesis
AS54_3913	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AS54_3913	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AS54_3913	PWY-5989	stearate biosynthesis II (bacteria and plants)
AS54_3913	PWY-5994	palmitate biosynthesis I (animals and fungi)
AS54_3913	PWY-6113	superpathway of mycolate biosynthesis
AS54_3913	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AS54_3913	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AS54_3913	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AS54_3913	PWY-7663	gondoate biosynthesis (anaerobic)
AS54_3913	PWY-7664	oleate biosynthesis IV (anaerobic)
AS54_3913	PWY-7858	AS54_3913
AS54_3913	PWYG-321	mycolate biosynthesis
AS54_3914	PWY-4381	fatty acid biosynthesis initiation I
AS54_3914	PWY-6799	fatty acid biosynthesis (plant mitochondria)
AS54_3914	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AS54_3921	PWY-6898	thiamin salvage III
AS54_3921	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AS54_3921	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AS54_3921	PWY-7356	thiamin salvage IV (yeast)
AS54_3922	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AS54_3922	PWY-5723	Rubisco shunt
AS54_3931	PWY-7851	AS54_3931
AS54_3933	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AS54_3938	PWY-7799	AS54_3938
AS54_3938	PWY-7800	AS54_3938
AS54_3945	PWY-5686	UMP biosynthesis
AS54_3945	PWY-7790	AS54_3945
AS54_3945	PWY-7791	AS54_3945
AS54_3946	PWY-5686	UMP biosynthesis
AS54_3946	PWY-7790	AS54_3946
AS54_3946	PWY-7791	AS54_3946
AS54_3949	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AS54_3949	PWY-5686	UMP biosynthesis
AS54_3949	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AS54_3949	PWY-7790	AS54_3949
AS54_3949	PWY-7791	AS54_3949
AS54_3950	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AS54_3950	PWY-5686	UMP biosynthesis
AS54_3950	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AS54_3950	PWY-7790	AS54_3950
AS54_3950	PWY-7791	AS54_3950
AS54_3951	PWY-5686	UMP biosynthesis
AS54_3951	PWY-7790	AS54_3951
AS54_3951	PWY-7791	AS54_3951
AS54_3952	PWY-5686	UMP biosynthesis
AS54_3952	PWY-7790	AS54_3952
AS54_3952	PWY-7791	AS54_3952
AS54_3954	PWY-7183	pyrimidine nucleobases salvage I
AS54_3956	PWY-7884	AS54_3956
AS54_3963	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AS54_3972	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AS54_3972	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AS54_3972	PWY-7953	AS54_3972
AS54_3973	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AS54_3973	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AS54_3973	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AS54_3973	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AS54_3974	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AS54_3974	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AS54_3974	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AS54_3974	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AS54_3975	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AS54_3975	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AS54_3976	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AS54_3976	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AS54_3976	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AS54_3983	PWY-6654	phosphopantothenate biosynthesis III
AS54_3991	PWY-7851	AS54_3991
AS54_4002	PWY-7142	cyanide detoxification II
AS54_4004	PWY-3781	aerobic respiration I (cytochrome c)
AS54_4004	PWY-4521	arsenite oxidation I (respiratory)
AS54_4004	PWY-6692	Fe(II) oxidation
AS54_4004	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AS54_4006	PWY-3781	aerobic respiration I (cytochrome c)
AS54_4006	PWY-4521	arsenite oxidation I (respiratory)
AS54_4006	PWY-6692	Fe(II) oxidation
AS54_4006	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AS54_4010	PWY-5750	itaconate biosynthesis
AS54_4010	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AS54_4010	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
AS54_4011	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AS54_4011	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AS54_4011	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AS54_4011	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AS54_4015	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AS54_4015	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AS54_403	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
AS54_4033	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AS54_4033	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AS54_4044	PWY-2941	L-lysine biosynthesis II
AS54_4045	PWY-2941	L-lysine biosynthesis II
AS54_4067	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AS54_4067	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AS54_4067	PWY-6936	seleno-amino acid biosynthesis
AS54_4067	PWY-702	L-methionine biosynthesis II
AS54_4098	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
AS54_4098	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
AS54_4099	PWY-6754	<i>S</i>-methyl-5'-thioadenosine degradation I
AS54_4102	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
AS54_4102	PWY-5532	adenosine nucleotides degradation IV
AS54_4102	PWY-5723	Rubisco shunt
AS54_4103	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
AS54_4104	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
AS54_4105	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
AS54_4105	PWY-5389	3-methylthiopropanoate biosynthesis
AS54_4119	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AS54_4119	PWY-6855	chitin degradation I (archaea)
AS54_4119	PWY-6906	chitin derivatives degradation
AS54_4120	PWY-6906	chitin derivatives degradation
AS54_4120	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
AS54_4120	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
AS54_4142	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AS54_4142	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AS54_4151	PWY-7181	pyrimidine deoxyribonucleosides degradation
AS54_4152	PWY-4202	arsenate detoxification I (glutaredoxin)
AS54_4152	PWY-5532	adenosine nucleotides degradation IV
AS54_4152	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AS54_4152	PWY-6608	guanosine nucleotides degradation III
AS54_4152	PWY-6609	adenine and adenosine salvage III
AS54_4152	PWY-6611	adenine and adenosine salvage V
AS54_4152	PWY-6620	guanine and guanosine salvage
AS54_4152	PWY-6627	salinosporamide A biosynthesis
AS54_4152	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
AS54_4152	PWY-7179	purine deoxyribonucleosides degradation I
AS54_4152	PWY-7179-1	purine deoxyribonucleosides degradation
AS54_4153	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
AS54_4175	PWY-7991	AS54_4175
AS54_4176	PWY-6167	flavin biosynthesis II (archaea)
AS54_4176	PWY-6168	flavin biosynthesis III (fungi)
AS54_4176	PWY-7980	AS54_4176
AS54_4177	PWY-6167	flavin biosynthesis II (archaea)
AS54_4177	PWY-6168	flavin biosynthesis III (fungi)
AS54_4177	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AS54_4177	PWY-7991	AS54_4177
AS54_4178	PWY-6167	flavin biosynthesis II (archaea)
AS54_4178	PWY-6168	flavin biosynthesis III (fungi)
AS54_418	PWY-6123	inosine-5'-phosphate biosynthesis I
AS54_418	PWY-7234	inosine-5'-phosphate biosynthesis III
AS54_4180	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AS54_4181	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AS54_4183	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AS54_4183	PWY-6578	8-amino-7-oxononanoate biosynthesis III
AS54_4183	PWY-7147	8-amino-7-oxononanoate biosynthesis II
AS54_4184	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AS54_4193	PWY-4981	L-proline biosynthesis II (from arginine)
AS54_4193	PWY-4984	urea cycle
AS54_4193	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AS54_4195	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AS54_4195	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AS54_4196	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AS54_4197	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AS54_4197	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AS54_420	PWY-6123	inosine-5'-phosphate biosynthesis I
AS54_420	PWY-6124	inosine-5'-phosphate biosynthesis II
AS54_420	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AS54_420	PWY-7234	inosine-5'-phosphate biosynthesis III
AS54_4201	PWY-3341	L-proline biosynthesis III
AS54_4201	PWY-4981	L-proline biosynthesis II (from arginine)
AS54_4201	PWY-6344	L-ornithine degradation II (Stickland reaction)
AS54_421	PWY-6123	inosine-5'-phosphate biosynthesis I
AS54_421	PWY-6124	inosine-5'-phosphate biosynthesis II
AS54_421	PWY-7234	inosine-5'-phosphate biosynthesis III
AS54_4218	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AS54_4218	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AS54_4218	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AS54_4218	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AS54_422	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AS54_422	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AS54_422	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AS54_4222	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AS54_4222	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AS54_4223	PWY-5482	pyruvate fermentation to acetate II
AS54_4223	PWY-5485	pyruvate fermentation to acetate IV
AS54_4223	PWY-5497	purine nucleobases degradation II (anaerobic)
AS54_4225	PWY-1281	sulfoacetaldehyde degradation I
AS54_4225	PWY-5482	pyruvate fermentation to acetate II
AS54_4225	PWY-5485	pyruvate fermentation to acetate IV
AS54_4225	PWY-5497	purine nucleobases degradation II (anaerobic)
AS54_4225	PWY-6637	sulfolactate degradation II
AS54_423	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AS54_423	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AS54_423	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AS54_4236	PWY-6891	thiazole biosynthesis II (Bacillus)
AS54_4236	PWY-6892	thiazole biosynthesis I (E. coli)
AS54_4236	PWY-7560	methylerythritol phosphate pathway II
AS54_424	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AS54_424	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AS54_424	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AS54_4240	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
AS54_4240	PWY-2201	folate transformations I
AS54_4240	PWY-3841	folate transformations II
AS54_4240	PWY-5030	L-histidine degradation III
AS54_4240	PWY-5497	purine nucleobases degradation II (anaerobic)
AS54_4240	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AS54_4240	PWY-7909	AS54_4240
AS54_425	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AS54_425	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AS54_425	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AS54_425	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AS54_4258	PWY-7799	AS54_4258
AS54_4258	PWY-7800	AS54_4258
AS54_4259	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AS54_4259	PWY-6416	quinate degradation II
AS54_4259	PWY-6707	gallate biosynthesis
AS54_426	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AS54_426	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AS54_426	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AS54_4269	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AS54_4269	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AS54_427	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AS54_427	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AS54_428	PWY-6123	inosine-5'-phosphate biosynthesis I
AS54_428	PWY-6124	inosine-5'-phosphate biosynthesis II
AS54_428	PWY-7234	inosine-5'-phosphate biosynthesis III
AS54_429	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AS54_429	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AS54_429	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AS54_4294	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AS54_4311	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AS54_4311	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AS54_4311	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AS54_4311	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AS54_4312	PWY-2201	folate transformations I
AS54_4312	PWY-3841	folate transformations II
AS54_4312	PWY-7977	AS54_4312
AS54_4313	PWY-2201	folate transformations I
AS54_4313	PWY-3841	folate transformations II
AS54_4320	PWY-2722	trehalose degradation IV
AS54_4320	PWY-2723	trehalose degradation V
AS54_4320	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AS54_4320	PWY-5661	GDP-glucose biosynthesis
AS54_4320	PWY-621	sucrose degradation III (sucrose invertase)
AS54_4320	PWY-7238	sucrose biosynthesis II
AS54_4320	PWY-7385	1,3-propanediol biosynthesis (engineered)
AS54_4324	PWY-6749	CMP-legionaminate biosynthesis I
AS54_4332	PWY-6854	ethylene biosynthesis III (microbes)
AS54_4345	PWY-7560	methylerythritol phosphate pathway II
AS54_4356	PWY-6556	pyrimidine ribonucleosides salvage II
AS54_4356	PWY-7181	pyrimidine deoxyribonucleosides degradation
AS54_4356	PWY-7193	pyrimidine ribonucleosides salvage I
AS54_4356	PWY-7199	pyrimidine deoxyribonucleosides salvage
AS54_4357	PWY-7039	phosphatidate metabolism, as a signaling molecule
AS54_4357	PWY-7817	AS54_4357
AS54_438	PWY-6853	ethylene biosynthesis II (microbes)
AS54_4381	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AS54_4383	PWY-3341	L-proline biosynthesis III
AS54_4383	PWY-4981	L-proline biosynthesis II (from arginine)
AS54_4383	PWY-6344	L-ornithine degradation II (Stickland reaction)
AS54_4387	PWY-5381	pyridine nucleotide cycling (plants)
AS54_4387	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AS54_4387	PWY-7761	AS54_4387
AS54_4389	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AS54_4391	PWY-5269	cardiolipin biosynthesis II
AS54_4391	PWY-5668	cardiolipin biosynthesis I
AS54_4391	PWY-7817	AS54_4391
AS54_4393	PWY-5669	phosphatidylethanolamine biosynthesis I
AS54_4401	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AS54_4401	PWY-5491	diethylphosphate degradation
AS54_4412	PWY-7158	L-phenylalanine degradation V
AS54_4424	PWY-3162	L-tryptophan degradation V (side chain pathway)
AS54_4424	PWY-5057	L-valine degradation II
AS54_4424	PWY-5076	L-leucine degradation III
AS54_4424	PWY-5078	L-isoleucine degradation II
AS54_4424	PWY-5079	L-phenylalanine degradation III
AS54_4424	PWY-5082	L-methionine degradation III
AS54_4424	PWY-5480	pyruvate fermentation to ethanol I
AS54_4424	PWY-5486	pyruvate fermentation to ethanol II
AS54_4424	PWY-5751	phenylethanol biosynthesis
AS54_4424	PWY-6313	serotonin degradation
AS54_4424	PWY-6333	acetaldehyde biosynthesis I
AS54_4424	PWY-6342	noradrenaline and adrenaline degradation
AS54_4424	PWY-6587	pyruvate fermentation to ethanol III
AS54_4424	PWY-6802	salidroside biosynthesis
AS54_4424	PWY-6871	3-methylbutanol biosynthesis
AS54_4424	PWY-7013	L-1,2-propanediol degradation
AS54_4424	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AS54_4424	PWY-7118	chitin degradation to ethanol
AS54_4424	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AS54_4427	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AS54_4427	PWY-6153	autoinducer AI-2 biosynthesis I
AS54_4427	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
AS54_4433	PWY-7193	pyrimidine ribonucleosides salvage I
AS54_4449	PWY-7887	AS54_4449
AS54_4449	PWY-7892	AS54_4449
AS54_4450	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AS54_4460	PWY-6605	adenine and adenosine salvage II
AS54_4460	PWY-6610	adenine and adenosine salvage IV
AS54_4460	PWY-7805	AS54_4460
AS54_4460	PWY-7807	AS54_4460
AS54_4461	PWY-7805	AS54_4461
AS54_4461	PWY-7807	AS54_4461
AS54_4469	PWY-6700	queuosine biosynthesis
AS54_4470	PWY-6700	queuosine biosynthesis
AS54_4482	PWY-5316	nicotine biosynthesis
AS54_4482	PWY-7342	superpathway of nicotine biosynthesis
AS54_4483	PWY-5316	nicotine biosynthesis
AS54_4483	PWY-5381	pyridine nucleotide cycling (plants)
AS54_4483	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AS54_4483	PWY-7342	superpathway of nicotine biosynthesis
AS54_4484	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AS54_4487	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
AS54_450	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AS54_4509	PWY-2161	folate polyglutamylation
AS54_4513	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AS54_4514	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AS54_4514	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AS54_4515	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AS54_4515	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AS54_4516	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AS54_4516	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AS54_4518	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AS54_4537	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AS54_4537	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AS54_4559	PWY-3781	aerobic respiration I (cytochrome c)
AS54_4559	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AS54_4559	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AS54_4559	PWY-5690	TCA cycle II (plants and fungi)
AS54_4559	PWY-6728	methylaspartate cycle
AS54_4559	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AS54_4559	PWY-7254	TCA cycle VII (acetate-producers)
AS54_4559	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AS54_4560	PWY-3781	aerobic respiration I (cytochrome c)
AS54_4560	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AS54_4560	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AS54_4560	PWY-5690	TCA cycle II (plants and fungi)
AS54_4560	PWY-6728	methylaspartate cycle
AS54_4560	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AS54_4560	PWY-7254	TCA cycle VII (acetate-producers)
AS54_4560	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AS54_4628	PWY-6834	spermidine biosynthesis III
AS54_4629	PWY-1042	glycolysis IV (plant cytosol)
AS54_4629	PWY-5484	glycolysis II (from fructose 6-phosphate)
AS54_4629	PWY-6901	superpathway of glucose and xylose degradation
AS54_4629	PWY-7003	glycerol degradation to butanol
AS54_4630	PWY-7851	AS54_4630
AS54_4639	PWY-1622	formaldehyde assimilation I (serine pathway)
AS54_4639	PWY-5392	reductive TCA cycle II
AS54_4639	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AS54_4639	PWY-5690	TCA cycle II (plants and fungi)
AS54_4639	PWY-5913	TCA cycle VI (obligate autotrophs)
AS54_4639	PWY-6728	methylaspartate cycle
AS54_4639	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AS54_4639	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AS54_4639	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AS54_4640	PWY-5913	TCA cycle VI (obligate autotrophs)
AS54_4640	PWY-6549	L-glutamine biosynthesis III
AS54_4640	PWY-6728	methylaspartate cycle
AS54_4640	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AS54_4640	PWY-7124	ethylene biosynthesis V (engineered)
AS54_4640	PWY-7254	TCA cycle VII (acetate-producers)
AS54_4640	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AS54_4645	PWY-1042	glycolysis IV (plant cytosol)
AS54_4645	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AS54_4645	PWY-5484	glycolysis II (from fructose 6-phosphate)
AS54_4645	PWY-5723	Rubisco shunt
AS54_4645	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AS54_4645	PWY-6886	1-butanol autotrophic biosynthesis
AS54_4645	PWY-6901	superpathway of glucose and xylose degradation
AS54_4645	PWY-7003	glycerol degradation to butanol
AS54_4645	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AS54_4645	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AS54_4646	PWY-1042	glycolysis IV (plant cytosol)
AS54_4646	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AS54_4646	PWY-5484	glycolysis II (from fructose 6-phosphate)
AS54_4646	PWY-7385	1,3-propanediol biosynthesis (engineered)
AS54_4647	PWY-4381	fatty acid biosynthesis initiation I
AS54_4647	PWY-5743	3-hydroxypropanoate cycle
AS54_4647	PWY-5744	glyoxylate assimilation
AS54_4647	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AS54_4647	PWY-6722	candicidin biosynthesis
AS54_4648	PWY-4381	fatty acid biosynthesis initiation I
AS54_4648	PWY-5743	3-hydroxypropanoate cycle
AS54_4648	PWY-5744	glyoxylate assimilation
AS54_4648	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AS54_4648	PWY-6722	candicidin biosynthesis
AS54_4654	PWY-7805	AS54_4654
AS54_4654	PWY-7807	AS54_4654
AS54_4658	PWY-1281	sulfoacetaldehyde degradation I
AS54_4658	PWY-5482	pyruvate fermentation to acetate II
AS54_4658	PWY-5485	pyruvate fermentation to acetate IV
AS54_4658	PWY-5497	purine nucleobases degradation II (anaerobic)
AS54_4658	PWY-6637	sulfolactate degradation II
AS54_4661	PWY-7799	AS54_4661
AS54_4661	PWY-7800	AS54_4661
AS54_4680	PWY-4983	L-citrulline-nitric oxide cycle
AS54_4680	PWY-4984	urea cycle
AS54_4680	PWY-5	canavanine biosynthesis
AS54_4680	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AS54_4680	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AS54_4681	PWY-4983	L-citrulline-nitric oxide cycle
AS54_4681	PWY-4984	urea cycle
AS54_4681	PWY-5	canavanine biosynthesis
AS54_4681	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AS54_4681	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AS54_4688	PWY-5482	pyruvate fermentation to acetate II
AS54_4688	PWY-5485	pyruvate fermentation to acetate IV
AS54_4688	PWY-5497	purine nucleobases degradation II (anaerobic)
AS54_4693	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AS54_4693	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AS54_4693	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
AS54_4699	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AS54_47	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AS54_4706	PWY-7793	AS54_4706
AS54_4747	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AS54_4747	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AS54_4747	PWY-7953	AS54_4747
AS54_4748	PWY-5381	pyridine nucleotide cycling (plants)
AS54_475	PWY-6754	<i>S</i>-methyl-5'-thioadenosine degradation I
AS54_476	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
AS54_476	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
AS54_4779	PWY-6823	molybdenum cofactor biosynthesis
AS54_4779	PWY-7887	AS54_4779
AS54_4781	PWY-6823	molybdenum cofactor biosynthesis
AS54_4782	PWY-6823	molybdenum cofactor biosynthesis
AS54_4784	PWY-6823	molybdenum cofactor biosynthesis
AS54_481	PWY-101	photosynthesis light reactions
AS54_4812	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AS54_4812	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AS54_4820	PWY-5964	guanylyl molybdenum cofactor biosynthesis
AS54_4820	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
AS54_4825	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AS54_4825	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
AS54_4826	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AS54_4826	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AS54_4849	PWY-6502	oxidized GTP and dGTP detoxification
AS54_4853	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AS54_4853	PWY-6153	autoinducer AI-2 biosynthesis I
AS54_4853	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
AS54_4854	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AS54_4854	PWY-5743	3-hydroxypropanoate cycle
AS54_4854	PWY-5744	glyoxylate assimilation
AS54_4854	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AS54_4854	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AS54_4854	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AS54_4854	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AS54_4887	PWY-6599	guanine and guanosine salvage II
AS54_4887	PWY-6609	adenine and adenosine salvage III
AS54_4887	PWY-6610	adenine and adenosine salvage IV
AS54_4887	PWY-6620	guanine and guanosine salvage
AS54_490	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
AS54_490	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
AS54_490	PWY-7717	AS54_490
AS54_490	PWY-7733	AS54_490
AS54_490	PWY-7734	AS54_490
AS54_490	PWY-7765	AS54_490
AS54_4910	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AS54_4910	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AS54_4910	PWY-7242	D-fructuronate degradation
AS54_4910	PWY-7310	D-glucosaminate degradation
AS54_4910	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
AS54_4911	PWY-7310	D-glucosaminate degradation
AS54_4916	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AS54_4917	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AS54_4918	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AS54_4919	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AS54_4920	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AS54_4921	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AS54_4921	PWY-5901	2,3-dihydroxybenzoate biosynthesis
AS54_4921	PWY-6406	salicylate biosynthesis I
AS54_4922	PWY-5839	menaquinol-7 biosynthesis
AS54_4922	PWY-5851	demethylmenaquinol-9 biosynthesis
AS54_4922	PWY-5852	demethylmenaquinol-8 biosynthesis I
AS54_4922	PWY-5853	demethylmenaquinol-6 biosynthesis I
AS54_4922	PWY-5890	menaquinol-10 biosynthesis
AS54_4922	PWY-5891	menaquinol-11 biosynthesis
AS54_4922	PWY-5892	menaquinol-12 biosynthesis
AS54_4922	PWY-5895	menaquinol-13 biosynthesis
AS54_4928	PWY-5941	glycogen degradation II (eukaryotic)
AS54_4928	PWY-6731	starch degradation III
AS54_4928	PWY-6737	starch degradation V
AS54_4928	PWY-7238	sucrose biosynthesis II
AS54_4929	PWY-622	starch biosynthesis
AS54_4931	PWY-622	starch biosynthesis
AS54_4931	PWY-7902	AS54_4931
AS54_4932	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AS54_4932	PWY-622	starch biosynthesis
AS54_4932	PWY-7900	AS54_4932
AS54_4935	PWY-5481	pyruvate fermentation to lactate
AS54_4935	PWY-6901	superpathway of glucose and xylose degradation
AS54_4965	PWY-3801	sucrose degradation II (sucrose synthase)
AS54_4965	PWY-5054	sorbitol biosynthesis I
AS54_4965	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
AS54_4965	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AS54_4965	PWY-5659	GDP-mannose biosynthesis
AS54_4965	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AS54_4965	PWY-621	sucrose degradation III (sucrose invertase)
AS54_4965	PWY-622	starch biosynthesis
AS54_4965	PWY-6981	chitin biosynthesis
AS54_4965	PWY-6992	1,5-anhydrofructose degradation
AS54_4965	PWY-7238	sucrose biosynthesis II
AS54_4965	PWY-7347	sucrose biosynthesis III
AS54_4965	PWY-7385	1,3-propanediol biosynthesis (engineered)
AS54_4975	PWY-6854	ethylene biosynthesis III (microbes)
AS54_4986	PWY-3801	sucrose degradation II (sucrose synthase)
AS54_4986	PWY-6527	stachyose degradation
AS54_4986	PWY-7238	sucrose biosynthesis II
AS54_4986	PWY-7343	UDP-glucose biosynthesis
AS54_4986	PWY-7817	AS54_4986
AS54_4987	PWY-6749	CMP-legionaminate biosynthesis I
AS54_4994	PWY-101	photosynthesis light reactions
AS54_50	PWY-7805	AS54_50
AS54_50	PWY-7807	AS54_50
AS54_5002	PWY-2941	L-lysine biosynthesis II
AS54_5002	PWY-5097	L-lysine biosynthesis VI
AS54_5023	PWY-5484	glycolysis II (from fructose 6-phosphate)
AS54_5033	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AS54_5033	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AS54_5042	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AS54_505	PWY-6897	thiamin salvage II
AS54_505	PWY-7356	thiamin salvage IV (yeast)
AS54_505	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AS54_506	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AS54_506	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AS54_506	PWY-6897	thiamin salvage II
AS54_506	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AS54_506	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AS54_506	PWY-7356	thiamin salvage IV (yeast)
AS54_506	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AS54_5062	PWY-5481	pyruvate fermentation to lactate
AS54_5062	PWY-6901	superpathway of glucose and xylose degradation
AS54_5080	PWY-1361	benzoyl-CoA degradation I (aerobic)
AS54_5080	PWY-5109	2-methylbutanoate biosynthesis
AS54_5080	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AS54_5080	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AS54_5080	PWY-5177	glutaryl-CoA degradation
AS54_5080	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AS54_5080	PWY-6435	4-hydroxybenzoate biosynthesis V
AS54_5080	PWY-6583	pyruvate fermentation to butanol I
AS54_5080	PWY-6863	pyruvate fermentation to hexanol
AS54_5080	PWY-6883	pyruvate fermentation to butanol II
AS54_5080	PWY-6944	androstenedione degradation
AS54_5080	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AS54_5080	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AS54_5080	PWY-7007	methyl ketone biosynthesis
AS54_5080	PWY-7046	4-coumarate degradation (anaerobic)
AS54_5080	PWY-7094	fatty acid salvage
AS54_5080	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AS54_5080	PWY-735	jasmonic acid biosynthesis
AS54_5080	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AS54_5080	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AS54_5080	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AS54_5080	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
AS54_5080	PWY-7726	AS54_5080
AS54_5080	PWY-7778	AS54_5080
AS54_5080	PWY-7779	AS54_5080
AS54_5083	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
AS54_5083	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AS54_5144	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AS54_5144	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AS54_5144	PWY-7953	AS54_5144
AS54_515	PWY-6855	chitin degradation I (archaea)
AS54_515	PWY-6902	chitin degradation II
AS54_515	PWY-7822	AS54_515
AS54_5170	PWY-1042	glycolysis IV (plant cytosol)
AS54_5170	PWY-1622	formaldehyde assimilation I (serine pathway)
AS54_5170	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AS54_5170	PWY-5484	glycolysis II (from fructose 6-phosphate)
AS54_5170	PWY-5723	Rubisco shunt
AS54_5170	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AS54_5170	PWY-6886	1-butanol autotrophic biosynthesis
AS54_5170	PWY-6901	superpathway of glucose and xylose degradation
AS54_5170	PWY-7003	glycerol degradation to butanol
AS54_5170	PWY-7124	ethylene biosynthesis V (engineered)
AS54_5170	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AS54_5171	PWY-1042	glycolysis IV (plant cytosol)
AS54_5171	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AS54_5171	PWY-5484	glycolysis II (from fructose 6-phosphate)
AS54_5171	PWY-5723	Rubisco shunt
AS54_5171	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AS54_5171	PWY-6886	1-butanol autotrophic biosynthesis
AS54_5171	PWY-6901	superpathway of glucose and xylose degradation
AS54_5171	PWY-7003	glycerol degradation to butanol
AS54_5171	PWY-7124	ethylene biosynthesis V (engineered)
AS54_5171	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AS54_5172	PWY-1042	glycolysis IV (plant cytosol)
AS54_5172	PWY-5484	glycolysis II (from fructose 6-phosphate)
AS54_5172	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AS54_5172	PWY-7003	glycerol degradation to butanol
AS54_5173	PWY-1042	glycolysis IV (plant cytosol)
AS54_5173	PWY-5484	glycolysis II (from fructose 6-phosphate)
AS54_5173	PWY-6886	1-butanol autotrophic biosynthesis
AS54_5173	PWY-6901	superpathway of glucose and xylose degradation
AS54_5173	PWY-7003	glycerol degradation to butanol
AS54_5174	PWY-1042	glycolysis IV (plant cytosol)
AS54_5174	PWY-5484	glycolysis II (from fructose 6-phosphate)
AS54_5174	PWY-6901	superpathway of glucose and xylose degradation
AS54_5174	PWY-7003	glycerol degradation to butanol
AS54_5213	PWY-7805	AS54_5213
AS54_5213	PWY-7807	AS54_5213
AS54_5251	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
AS54_5251	PWY-7820	AS54_5251
AS54_5252	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AS54_5252	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AS54_5252	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AS54_5263	PWY-6834	spermidine biosynthesis III
AS54_5282	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
AS54_5287	PWY-7511	protein ubiquitylation
AS54_5321	PWY-3861	mannitol degradation II
AS54_5321	PWY-3881	mannitol biosynthesis
AS54_5321	PWY-5659	GDP-mannose biosynthesis
AS54_5321	PWY-6992	1,5-anhydrofructose degradation
AS54_5321	PWY-7456	mannan degradation
AS54_5321	PWY-7586	&beta;-1,4-D-mannosyl-<i>N</i>-acetyl-D-glucosamine degradation
AS54_5321	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
AS54_5324	PWY-3821	galactose degradation III
AS54_5324	PWY-6317	galactose degradation I (Leloir pathway)
AS54_5324	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
AS54_5324	PWY-6527	stachyose degradation
AS54_5324	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
AS54_5324	PWY-7344	UDP-D-galactose biosynthesis
AS54_5327	PWY-3861	mannitol degradation II
AS54_5327	PWY-3881	mannitol biosynthesis
AS54_5327	PWY-5659	GDP-mannose biosynthesis
AS54_5327	PWY-6992	1,5-anhydrofructose degradation
AS54_5327	PWY-7456	mannan degradation
AS54_5327	PWY-7586	&beta;-1,4-D-mannosyl-<i>N</i>-acetyl-D-glucosamine degradation
AS54_5327	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
AS54_5328	PWY-5659	GDP-mannose biosynthesis
AS54_5328	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
AS54_5331	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
AS54_5331	PWY-7820	AS54_5331
AS54_5336	PWY-3801	sucrose degradation II (sucrose synthase)
AS54_5336	PWY-6527	stachyose degradation
AS54_5336	PWY-7238	sucrose biosynthesis II
AS54_5336	PWY-7343	UDP-glucose biosynthesis
AS54_5336	PWY-7817	AS54_5336
AS54_5341	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AS54_5341	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AS54_5341	PWY-5989	stearate biosynthesis II (bacteria and plants)
AS54_5341	PWY-5994	palmitate biosynthesis I (animals and fungi)
AS54_5341	PWY-6113	superpathway of mycolate biosynthesis
AS54_5341	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AS54_5341	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AS54_5341	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AS54_5341	PWY-7663	gondoate biosynthesis (anaerobic)
AS54_5341	PWY-7664	oleate biosynthesis IV (anaerobic)
AS54_5341	PWY-7858	AS54_5341
AS54_5341	PWYG-321	mycolate biosynthesis
AS54_5349	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AS54_5349	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AS54_5349	PWY-7953	AS54_5349
AS54_5367	PWY-7980	AS54_5367
AS54_5369	PWY-7980	AS54_5369
AS54_5376	PWY-7183	pyrimidine nucleobases salvage I
AS54_5377	PWY-1622	formaldehyde assimilation I (serine pathway)
AS54_5377	PWY-181	photorespiration
AS54_5377	PWY-2161	folate polyglutamylation
AS54_5377	PWY-2201	folate transformations I
AS54_5377	PWY-3661	glycine betaine degradation I
AS54_5377	PWY-3661-1	glycine betaine degradation II (mammalian)
AS54_5377	PWY-3841	folate transformations II
AS54_5377	PWY-5497	purine nucleobases degradation II (anaerobic)
AS54_5395	PWY-7199	pyrimidine deoxyribonucleosides salvage
AS54_5397	PWY-7980	AS54_5397
AS54_5398	PWY-5484	glycolysis II (from fructose 6-phosphate)
AS54_5399	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AS54_5399	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AS54_5399	PWY-7953	AS54_5399
AS54_5400	PWY-1042	glycolysis IV (plant cytosol)
AS54_5400	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AS54_5400	PWY-5484	glycolysis II (from fructose 6-phosphate)
AS54_5400	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AS54_5400	PWY-7385	1,3-propanediol biosynthesis (engineered)
AS54_5403	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AS54_5403	PWY-7177	UTP and CTP dephosphorylation II
AS54_5403	PWY-7185	UTP and CTP dephosphorylation I
AS54_5408	PWY-1361	benzoyl-CoA degradation I (aerobic)
AS54_5408	PWY-5109	2-methylbutanoate biosynthesis
AS54_5408	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AS54_5408	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AS54_5408	PWY-5177	glutaryl-CoA degradation
AS54_5408	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AS54_5408	PWY-6435	4-hydroxybenzoate biosynthesis V
AS54_5408	PWY-6583	pyruvate fermentation to butanol I
AS54_5408	PWY-6863	pyruvate fermentation to hexanol
AS54_5408	PWY-6883	pyruvate fermentation to butanol II
AS54_5408	PWY-6944	androstenedione degradation
AS54_5408	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AS54_5408	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AS54_5408	PWY-7007	methyl ketone biosynthesis
AS54_5408	PWY-7046	4-coumarate degradation (anaerobic)
AS54_5408	PWY-7094	fatty acid salvage
AS54_5408	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AS54_5408	PWY-735	jasmonic acid biosynthesis
AS54_5408	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AS54_5408	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AS54_5408	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AS54_5408	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
AS54_5408	PWY-7726	AS54_5408
AS54_5408	PWY-7778	AS54_5408
AS54_5408	PWY-7779	AS54_5408
AS54_5421	PWY-7799	AS54_5421
AS54_5421	PWY-7800	AS54_5421
AS54_5433	PWY-40	putrescine biosynthesis I
AS54_5433	PWY-6305	putrescine biosynthesis IV
AS54_5438	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AS54_5438	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AS54_5438	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AS54_5438	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AS54_5450	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AS54_5450	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AS54_5451	PWY-1281	sulfoacetaldehyde degradation I
AS54_5451	PWY-5482	pyruvate fermentation to acetate II
AS54_5451	PWY-5485	pyruvate fermentation to acetate IV
AS54_5451	PWY-5497	purine nucleobases degradation II (anaerobic)
AS54_5451	PWY-6637	sulfolactate degradation II
AS54_5453	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AS54_5453	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AS54_5476	PWY-6910	hydroxymethylpyrimidine salvage
AS54_5476	PWY-7356	thiamin salvage IV (yeast)
AS54_5476	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AS54_5482	PWY-7815	AS54_5482
AS54_5482	PWY-7816	AS54_5482
AS54_5482	PWY-7819	AS54_5482
AS54_5489	PWY-6605	adenine and adenosine salvage II
AS54_5489	PWY-6610	adenine and adenosine salvage IV
AS54_5489	PWY-7805	AS54_5489
AS54_5489	PWY-7807	AS54_5489
AS54_5510	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
AS54_5510	PWY-7820	AS54_5510
AS54_5511	PWY-3801	sucrose degradation II (sucrose synthase)
AS54_5511	PWY-6527	stachyose degradation
AS54_5511	PWY-7238	sucrose biosynthesis II
AS54_5511	PWY-7343	UDP-glucose biosynthesis
AS54_5511	PWY-7817	AS54_5511
AS54_555	PWY-5392	reductive TCA cycle II
AS54_555	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AS54_555	PWY-5690	TCA cycle II (plants and fungi)
AS54_555	PWY-5913	TCA cycle VI (obligate autotrophs)
AS54_555	PWY-6728	methylaspartate cycle
AS54_555	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AS54_555	PWY-7254	TCA cycle VII (acetate-producers)
AS54_555	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AS54_565	PWY-7511	protein ubiquitylation
AS54_578	PWY-5480	pyruvate fermentation to ethanol I
AS54_578	PWY-5485	pyruvate fermentation to acetate IV
AS54_578	PWY-5493	reductive monocarboxylic acid cycle
AS54_580	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AS54_580	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AS54_580	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AS54_580	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AS54_580	PWY-7817	AS54_580
AS54_600	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AS54_630	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AS54_630	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AS54_630	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AS54_630	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AS54_633	PWY-6700	queuosine biosynthesis
AS54_671	PWY-1881	formate oxidation to CO<sub>2</sub>
AS54_671	PWY-5497	purine nucleobases degradation II (anaerobic)
AS54_671	PWY-6696	oxalate degradation III
AS54_671	PWY-7985	AS54_671
AS54_678	PWY-5381	pyridine nucleotide cycling (plants)
AS54_690	PWY-5392	reductive TCA cycle II
AS54_690	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AS54_690	PWY-5690	TCA cycle II (plants and fungi)
AS54_690	PWY-5913	TCA cycle VI (obligate autotrophs)
AS54_690	PWY-6728	methylaspartate cycle
AS54_690	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AS54_690	PWY-7254	TCA cycle VII (acetate-producers)
AS54_690	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AS54_704	PWY-5686	UMP biosynthesis
AS54_704	PWY-7790	AS54_704
AS54_704	PWY-7791	AS54_704
AS54_757	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AS54_757	PWY-5723	Rubisco shunt
AS54_762	PWY-7782	AS54_762
AS54_762	PWY-7783	AS54_762
AS54_764	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AS54_768	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
AS54_788	PWY-3781	aerobic respiration I (cytochrome c)
AS54_788	PWY-4521	arsenite oxidation I (respiratory)
AS54_788	PWY-6692	Fe(II) oxidation
AS54_788	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AS54_82	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AS54_82	PWY-6596	adenosine nucleotides degradation I
AS54_82	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AS54_83	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AS54_83	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AS54_833	PWY-6899	base-degraded thiamin salvage
AS54_833	PWY-7356	thiamin salvage IV (yeast)
AS54_837	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AS54_837	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AS54_837	PWY-6897	thiamin salvage II
AS54_837	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AS54_837	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AS54_837	PWY-7356	thiamin salvage IV (yeast)
AS54_837	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AS54_838	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AS54_838	PWY-7806	AS54_838
AS54_84	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
AS54_840	PWY-6891	thiazole biosynthesis II (Bacillus)
AS54_840	PWY-6892	thiazole biosynthesis I (E. coli)
AS54_842	PWY-6910	hydroxymethylpyrimidine salvage
AS54_842	PWY-7356	thiamin salvage IV (yeast)
AS54_842	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AS54_85	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
AS54_86	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
AS54_914	PWY-7511	protein ubiquitylation
AS54_947	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AS54_947	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AS54_963	PWY-5101	L-isoleucine biosynthesis II
AS54_963	PWY-5103	L-isoleucine biosynthesis III
AS54_963	PWY-5104	L-isoleucine biosynthesis IV
AS54_963	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AS54_963	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AS54_963	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AS54_963	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AS54_964	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
