AK40_102	PWY-2941	L-lysine biosynthesis II
AK40_102	PWY-2942	L-lysine biosynthesis III
AK40_102	PWY-5097	L-lysine biosynthesis VI
AK40_1023	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AK40_1034	PWY-2941	L-lysine biosynthesis II
AK40_1034	PWY-2942	L-lysine biosynthesis III
AK40_1034	PWY-5097	L-lysine biosynthesis VI
AK40_1034	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AK40_1034	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
AK40_1034	PWY-6559	spermidine biosynthesis II
AK40_1034	PWY-6562	norspermidine biosynthesis
AK40_1034	PWY-7153	grixazone biosynthesis
AK40_1034	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AK40_1034	PWY-7977	AK40_1034
AK40_1044	PWY-7883	AK40_1044
AK40_105	PWY-5278	sulfite oxidation III
AK40_105	PWY-5340	sulfate activation for sulfonation
AK40_105	PWY-6683	sulfate reduction III (assimilatory)
AK40_105	PWY-6932	selenate reduction
AK40_106	PWY-5340	sulfate activation for sulfonation
AK40_1065	PWY-7883	AK40_1065
AK40_107	PWY-6683	sulfate reduction III (assimilatory)
AK40_1070	PWY-7511	protein ubiquitylation
AK40_109	PWY-5194	siroheme biosynthesis
AK40_109	PWY-5196	factor 430 biosynthesis
AK40_109	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AK40_110	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AK40_1103	PWY-1622	formaldehyde assimilation I (serine pathway)
AK40_1103	PWY-5484	glycolysis II (from fructose 6-phosphate)
AK40_111	PWY-5194	siroheme biosynthesis
AK40_111	PWY-5196	factor 430 biosynthesis
AK40_111	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AK40_1113	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AK40_1113	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AK40_1126	PWY-5642	2,4-dinitrotoluene degradation
AK40_1130	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AK40_1160	PWY-4381	fatty acid biosynthesis initiation I
AK40_1160	PWY-5743	3-hydroxypropanoate cycle
AK40_1160	PWY-5744	glyoxylate assimilation
AK40_1160	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AK40_1160	PWY-6722	candicidin biosynthesis
AK40_1161	PWY-5108	L-isoleucine biosynthesis V
AK40_1161	PWY-5132	humulone biosynthesis
AK40_1161	PWY-5133	cohumulone biosynthesis
AK40_1161	PWY-6672	<i>cis</i>-genanyl-CoA degradation
AK40_1161	PWY-7118	chitin degradation to ethanol
AK40_1161	PWY-7857	AK40_1161
AK40_1172	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AK40_1172	PWY-6153	autoinducer AI-2 biosynthesis I
AK40_1172	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
AK40_1205	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AK40_1221	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AK40_1221	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AK40_1221	PWY-7953	AK40_1221
AK40_1222	PWY-6899	base-degraded thiamin salvage
AK40_1222	PWY-7356	thiamin salvage IV (yeast)
AK40_1245	PWY-5331	taurine biosynthesis
AK40_1250	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AK40_1250	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AK40_13	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
AK40_1312	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
AK40_1330	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AK40_1330	PWY-622	starch biosynthesis
AK40_1330	PWY-7900	AK40_1330
AK40_1355	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
AK40_1355	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
AK40_1355	PWY-7717	AK40_1355
AK40_1355	PWY-7733	AK40_1355
AK40_1355	PWY-7734	AK40_1355
AK40_1355	PWY-7765	AK40_1355
AK40_1356	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
AK40_1356	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
AK40_136	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AK40_136	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AK40_136	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AK40_136	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AK40_1373	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AK40_1373	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AK40_1393	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AK40_1393	PWY-5723	Rubisco shunt
AK40_1403	PWY-7883	AK40_1403
AK40_1423	PWY-7805	AK40_1423
AK40_1423	PWY-7807	AK40_1423
AK40_1429	PWY-2941	L-lysine biosynthesis II
AK40_1429	PWY-2942	L-lysine biosynthesis III
AK40_1429	PWY-5097	L-lysine biosynthesis VI
AK40_1432	PWY-4261	glycerol degradation I
AK40_1432	PWY-6118	glycerol-3-phosphate shuttle
AK40_1432	PWY-6952	glycerophosphodiester degradation
AK40_144	PWY-4202	arsenate detoxification I (glutaredoxin)
AK40_144	PWY-5532	adenosine nucleotides degradation IV
AK40_144	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AK40_144	PWY-6608	guanosine nucleotides degradation III
AK40_144	PWY-6609	adenine and adenosine salvage III
AK40_144	PWY-6611	adenine and adenosine salvage V
AK40_144	PWY-6620	guanine and guanosine salvage
AK40_144	PWY-6627	salinosporamide A biosynthesis
AK40_144	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
AK40_144	PWY-7179	purine deoxyribonucleosides degradation I
AK40_144	PWY-7179-1	purine deoxyribonucleosides degradation
AK40_1462	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AK40_1462	PWY-6153	autoinducer AI-2 biosynthesis I
AK40_1462	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
AK40_1463	PWY-7815	AK40_1463
AK40_1463	PWY-7816	AK40_1463
AK40_1463	PWY-7819	AK40_1463
AK40_149	PWY-6854	ethylene biosynthesis III (microbes)
AK40_1493	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AK40_1493	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AK40_1493	PWY-5989	stearate biosynthesis II (bacteria and plants)
AK40_1493	PWY-5994	palmitate biosynthesis I (animals and fungi)
AK40_1493	PWY-6113	superpathway of mycolate biosynthesis
AK40_1493	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AK40_1493	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AK40_1493	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AK40_1493	PWY-7663	gondoate biosynthesis (anaerobic)
AK40_1493	PWY-7664	oleate biosynthesis IV (anaerobic)
AK40_1493	PWY-7858	AK40_1493
AK40_1493	PWYG-321	mycolate biosynthesis
AK40_1494	PWY-3961	phosphopantothenate biosynthesis II
AK40_150	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AK40_150	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AK40_1539	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AK40_1540	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
AK40_1542	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AK40_1543	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AK40_1543	PWY-3461	L-tyrosine biosynthesis II
AK40_1543	PWY-3462	L-phenylalanine biosynthesis II
AK40_1543	PWY-6120	L-tyrosine biosynthesis III
AK40_1543	PWY-6164	3-dehydroquinate biosynthesis I
AK40_1543	PWY-6627	salinosporamide A biosynthesis
AK40_1543	PWY-7626	bacilysin biosynthesis
AK40_1543	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AK40_1559	PWY-7254	TCA cycle VII (acetate-producers)
AK40_1565	PWY-4261	glycerol degradation I
AK40_1577	PWY-3341	L-proline biosynthesis III
AK40_1577	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AK40_1578	PWY-3341	L-proline biosynthesis III
AK40_1578	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AK40_1579	PWY-3341	L-proline biosynthesis III
AK40_1579	PWY-4981	L-proline biosynthesis II (from arginine)
AK40_1579	PWY-6344	L-ornithine degradation II (Stickland reaction)
AK40_1585	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AK40_1585	PWY-5491	diethylphosphate degradation
AK40_1589	PWY-6303	methyl indole-3-acetate interconversion
AK40_1589	PWY-6857	retinol biosynthesis
AK40_1613	PWY-6610	adenine and adenosine salvage IV
AK40_1663	PWY-7942	AK40_1663
AK40_1666	PWY-4041	&gamma;-glutamyl cycle
AK40_1666	PWY-7942	AK40_1666
AK40_1668	PWY-4041	&gamma;-glutamyl cycle
AK40_1668	PWY-7942	AK40_1668
AK40_1701	PWY-5392	reductive TCA cycle II
AK40_1701	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AK40_1701	PWY-5690	TCA cycle II (plants and fungi)
AK40_1701	PWY-5913	TCA cycle VI (obligate autotrophs)
AK40_1701	PWY-6728	methylaspartate cycle
AK40_1701	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AK40_1701	PWY-7254	TCA cycle VII (acetate-producers)
AK40_1701	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AK40_1716	PWY-3341	L-proline biosynthesis III
AK40_1716	PWY-4981	L-proline biosynthesis II (from arginine)
AK40_1716	PWY-6344	L-ornithine degradation II (Stickland reaction)
AK40_1758	PWY-5839	menaquinol-7 biosynthesis
AK40_1758	PWY-5851	demethylmenaquinol-9 biosynthesis
AK40_1758	PWY-5852	demethylmenaquinol-8 biosynthesis I
AK40_1758	PWY-5853	demethylmenaquinol-6 biosynthesis I
AK40_1758	PWY-5890	menaquinol-10 biosynthesis
AK40_1758	PWY-5891	menaquinol-11 biosynthesis
AK40_1758	PWY-5892	menaquinol-12 biosynthesis
AK40_1758	PWY-5895	menaquinol-13 biosynthesis
AK40_178	PWY-7205	CMP phosphorylation
AK40_1787	PWY-5451	acetone degradation I (to methylglyoxal)
AK40_1787	PWY-5665	vanillin biosynthesis I
AK40_1787	PWY-6398	melatonin degradation I
AK40_1787	PWY-6992	1,5-anhydrofructose degradation
AK40_1787	PWY-7466	acetone degradation III (to propane-1,2-diol)
AK40_1787	PWY-7826	AK40_1787
AK40_180	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
AK40_180	PWY-6174	mevalonate pathway II (archaea)
AK40_180	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
AK40_180	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
AK40_180	PWY-7102	bisabolene biosynthesis
AK40_180	PWY-7391	isoprene biosynthesis II (engineered)
AK40_180	PWY-7524	mevalonate pathway III (archaea)
AK40_180	PWY-7560	methylerythritol phosphate pathway II
AK40_180	PWY-922	mevalonate pathway I
AK40_1807	PWY-4381	fatty acid biosynthesis initiation I
AK40_186	PWY-5667	CDP-diacylglycerol biosynthesis I
AK40_186	PWY-5981	CDP-diacylglycerol biosynthesis III
AK40_186	PWY-7902	AK40_186
AK40_1867	PWY-6409	pyoverdine I biosynthesis
AK40_1867	PWY-6562	norspermidine biosynthesis
AK40_1867	PWY-761	rhizobactin 1021 biosynthesis
AK40_1867	PWY-7855	AK40_1867
AK40_1867	PWY-7988	AK40_1867
AK40_192	PWY-5663	tetrahydrobiopterin biosynthesis I
AK40_192	PWY-5664	tetrahydrobiopterin biosynthesis II
AK40_192	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AK40_192	PWY-6703	preQ<sub>0</sub> biosynthesis
AK40_192	PWY-6983	tetrahydrobiopterin biosynthesis III
AK40_192	PWY-7442	drosopterin and aurodrosopterin biosynthesis
AK40_192	PWY-7852	AK40_192
AK40_193	PWY-5807	heptaprenyl diphosphate biosynthesis
AK40_1934	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
AK40_1934	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AK40_194	PWY-5839	menaquinol-7 biosynthesis
AK40_194	PWY-5844	menaquinol-9 biosynthesis
AK40_194	PWY-5849	menaquinol-6 biosynthesis
AK40_194	PWY-5890	menaquinol-10 biosynthesis
AK40_194	PWY-5891	menaquinol-11 biosynthesis
AK40_194	PWY-5892	menaquinol-12 biosynthesis
AK40_194	PWY-5895	menaquinol-13 biosynthesis
AK40_1945	PWY-1042	glycolysis IV (plant cytosol)
AK40_1945	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AK40_1945	PWY-5484	glycolysis II (from fructose 6-phosphate)
AK40_1945	PWY-5723	Rubisco shunt
AK40_1945	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AK40_1945	PWY-6886	1-butanol autotrophic biosynthesis
AK40_1945	PWY-6901	superpathway of glucose and xylose degradation
AK40_1945	PWY-7003	glycerol degradation to butanol
AK40_1945	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AK40_1945	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AK40_195	PWY-5807	heptaprenyl diphosphate biosynthesis
AK40_196	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AK40_196	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AK40_196	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AK40_196	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AK40_196	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AK40_196	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AK40_196	PWY-7205	CMP phosphorylation
AK40_196	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AK40_196	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AK40_196	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AK40_196	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AK40_196	PWY-7224	purine deoxyribonucleosides salvage
AK40_196	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AK40_196	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AK40_197	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AK40_1970	PWY-7560	methylerythritol phosphate pathway II
AK40_198	PWY-6164	3-dehydroquinate biosynthesis I
AK40_1989	PWY-4261	glycerol degradation I
AK40_1989	PWY-5530	sorbitol biosynthesis II
AK40_1991	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AK40_1991	PWY-5723	Rubisco shunt
AK40_1993	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AK40_1993	PWY-5723	Rubisco shunt
AK40_1993	PWY-6891	thiazole biosynthesis II (Bacillus)
AK40_1993	PWY-6892	thiazole biosynthesis I (E. coli)
AK40_1993	PWY-6901	superpathway of glucose and xylose degradation
AK40_1993	PWY-7560	methylerythritol phosphate pathway II
AK40_1994	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AK40_2005	PWY-6174	mevalonate pathway II (archaea)
AK40_2005	PWY-7391	isoprene biosynthesis II (engineered)
AK40_2005	PWY-7524	mevalonate pathway III (archaea)
AK40_2005	PWY-922	mevalonate pathway I
AK40_2041	PWY-3781	aerobic respiration I (cytochrome c)
AK40_2041	PWY-4521	arsenite oxidation I (respiratory)
AK40_2041	PWY-6692	Fe(II) oxidation
AK40_2041	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AK40_213	PWY-2941	L-lysine biosynthesis II
AK40_213	PWY-2942	L-lysine biosynthesis III
AK40_213	PWY-5097	L-lysine biosynthesis VI
AK40_2138	PWY-4983	L-citrulline-nitric oxide cycle
AK40_2138	PWY-4984	urea cycle
AK40_2138	PWY-5	canavanine biosynthesis
AK40_2138	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AK40_2138	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AK40_2144	PWY-5367	petroselinate biosynthesis
AK40_2144	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AK40_2144	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AK40_2144	PWY-5989	stearate biosynthesis II (bacteria and plants)
AK40_2144	PWY-5994	palmitate biosynthesis I (animals and fungi)
AK40_2144	PWY-6113	superpathway of mycolate biosynthesis
AK40_2144	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AK40_2144	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AK40_2144	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AK40_2144	PWY-7663	gondoate biosynthesis (anaerobic)
AK40_2144	PWY-7664	oleate biosynthesis IV (anaerobic)
AK40_2144	PWY-7858	AK40_2144
AK40_2144	PWYG-321	mycolate biosynthesis
AK40_2154	PWY-6823	molybdenum cofactor biosynthesis
AK40_2154	PWY-7887	AK40_2154
AK40_2155	PWY-6823	molybdenum cofactor biosynthesis
AK40_2158	PWY-6823	molybdenum cofactor biosynthesis
AK40_2162	PWY-1881	formate oxidation to CO<sub>2</sub>
AK40_2162	PWY-5497	purine nucleobases degradation II (anaerobic)
AK40_2162	PWY-6696	oxalate degradation III
AK40_2162	PWY-7985	AK40_2162
AK40_218	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AK40_218	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AK40_2193	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AK40_2193	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AK40_2193	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AK40_220	PWY-6654	phosphopantothenate biosynthesis III
AK40_222	PWY-5155	&beta;-alanine biosynthesis III
AK40_2244	PWY-5028	L-histidine degradation II
AK40_2244	PWY-5030	L-histidine degradation III
AK40_2245	PWY-5028	L-histidine degradation II
AK40_2245	PWY-5030	L-histidine degradation III
AK40_2246	PWY-5028	L-histidine degradation II
AK40_2246	PWY-5030	L-histidine degradation III
AK40_2278	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AK40_2278	PWY-5723	Rubisco shunt
AK40_2278	PWY-6891	thiazole biosynthesis II (Bacillus)
AK40_2278	PWY-6892	thiazole biosynthesis I (E. coli)
AK40_2278	PWY-6901	superpathway of glucose and xylose degradation
AK40_2278	PWY-7560	methylerythritol phosphate pathway II
AK40_2290	PWY-381	nitrate reduction II (assimilatory)
AK40_2290	PWY-5675	nitrate reduction V (assimilatory)
AK40_2290	PWY-6549	L-glutamine biosynthesis III
AK40_2290	PWY-6963	ammonia assimilation cycle I
AK40_2290	PWY-6964	ammonia assimilation cycle II
AK40_23	PWY-6703	preQ<sub>0</sub> biosynthesis
AK40_230	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AK40_230	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AK40_230	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AK40_230	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AK40_2300	PWY-2781	<i>cis</i>-zeatin biosynthesis
AK40_2311	PWY-6855	chitin degradation I (archaea)
AK40_2311	PWY-6902	chitin degradation II
AK40_2311	PWY-7822	AK40_2311
AK40_2336	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AK40_2336	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AK40_2336	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AK40_2336	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AK40_2362	PWY-5392	reductive TCA cycle II
AK40_2362	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AK40_2363	PWY-7533	gliotoxin biosynthesis
AK40_2370	PWY-5269	cardiolipin biosynthesis II
AK40_2370	PWY-5668	cardiolipin biosynthesis I
AK40_2370	PWY-7817	AK40_2370
AK40_2386	PWY-2941	L-lysine biosynthesis II
AK40_2386	PWY-2942	L-lysine biosynthesis III
AK40_2386	PWY-5097	L-lysine biosynthesis VI
AK40_2387	PWY-2941	L-lysine biosynthesis II
AK40_2387	PWY-2942	L-lysine biosynthesis III
AK40_2387	PWY-5097	L-lysine biosynthesis VI
AK40_2387	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
AK40_2387	PWY-6559	spermidine biosynthesis II
AK40_2387	PWY-6562	norspermidine biosynthesis
AK40_2387	PWY-7153	grixazone biosynthesis
AK40_2387	PWY-7977	AK40_2387
AK40_2388	PWY-2941	L-lysine biosynthesis II
AK40_2388	PWY-2942	L-lysine biosynthesis III
AK40_2388	PWY-5097	L-lysine biosynthesis VI
AK40_2388	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AK40_2388	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
AK40_2388	PWY-6559	spermidine biosynthesis II
AK40_2388	PWY-6562	norspermidine biosynthesis
AK40_2388	PWY-7153	grixazone biosynthesis
AK40_2388	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AK40_2388	PWY-7977	AK40_2388
AK40_2396	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
AK40_2396	PWY-6167	flavin biosynthesis II (archaea)
AK40_2396	PWY-6168	flavin biosynthesis III (fungi)
AK40_2396	PWY-7863	AK40_2396
AK40_2411	PWY-7560	methylerythritol phosphate pathway II
AK40_2412	PWY-5667	CDP-diacylglycerol biosynthesis I
AK40_2412	PWY-5981	CDP-diacylglycerol biosynthesis III
AK40_2412	PWY-7817	AK40_2412
AK40_2425	PWY-5392	reductive TCA cycle II
AK40_2425	PWY-5537	pyruvate fermentation to acetate V
AK40_2425	PWY-5538	pyruvate fermentation to acetate VI
AK40_2425	PWY-5690	TCA cycle II (plants and fungi)
AK40_2425	PWY-5913	TCA cycle VI (obligate autotrophs)
AK40_2425	PWY-6728	methylaspartate cycle
AK40_2425	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AK40_2425	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AK40_2426	PWY-5392	reductive TCA cycle II
AK40_2426	PWY-5537	pyruvate fermentation to acetate V
AK40_2426	PWY-5538	pyruvate fermentation to acetate VI
AK40_2426	PWY-5690	TCA cycle II (plants and fungi)
AK40_2426	PWY-5913	TCA cycle VI (obligate autotrophs)
AK40_2426	PWY-6728	methylaspartate cycle
AK40_2426	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AK40_2426	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AK40_2431	PWY-6829	tRNA methylation (yeast)
AK40_2431	PWY-7285	methylwyosine biosynthesis
AK40_2431	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
AK40_2441	PWY-5367	petroselinate biosynthesis
AK40_2441	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AK40_2441	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AK40_2441	PWY-5989	stearate biosynthesis II (bacteria and plants)
AK40_2441	PWY-5994	palmitate biosynthesis I (animals and fungi)
AK40_2441	PWY-6113	superpathway of mycolate biosynthesis
AK40_2441	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AK40_2441	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AK40_2441	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AK40_2441	PWY-7663	gondoate biosynthesis (anaerobic)
AK40_2441	PWY-7664	oleate biosynthesis IV (anaerobic)
AK40_2441	PWY-7858	AK40_2441
AK40_2441	PWYG-321	mycolate biosynthesis
AK40_2442	PWY-4381	fatty acid biosynthesis initiation I
AK40_2442	PWY-6799	fatty acid biosynthesis (plant mitochondria)
AK40_2442	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AK40_2449	PWY-6898	thiamin salvage III
AK40_2449	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AK40_2449	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AK40_2449	PWY-7356	thiamin salvage IV (yeast)
AK40_2450	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AK40_2450	PWY-5723	Rubisco shunt
AK40_2459	PWY-7851	AK40_2459
AK40_2461	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AK40_2466	PWY-7799	AK40_2466
AK40_2466	PWY-7800	AK40_2466
AK40_247	PWY-7799	AK40_247
AK40_247	PWY-7800	AK40_247
AK40_2473	PWY-5686	UMP biosynthesis
AK40_2473	PWY-7790	AK40_2473
AK40_2473	PWY-7791	AK40_2473
AK40_2474	PWY-5686	UMP biosynthesis
AK40_2474	PWY-7790	AK40_2474
AK40_2474	PWY-7791	AK40_2474
AK40_2477	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AK40_2477	PWY-5686	UMP biosynthesis
AK40_2477	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AK40_2477	PWY-7790	AK40_2477
AK40_2477	PWY-7791	AK40_2477
AK40_2478	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AK40_2478	PWY-5686	UMP biosynthesis
AK40_2478	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AK40_2478	PWY-7790	AK40_2478
AK40_2478	PWY-7791	AK40_2478
AK40_2479	PWY-5686	UMP biosynthesis
AK40_2479	PWY-7790	AK40_2479
AK40_2479	PWY-7791	AK40_2479
AK40_2480	PWY-5686	UMP biosynthesis
AK40_2480	PWY-7790	AK40_2480
AK40_2480	PWY-7791	AK40_2480
AK40_2482	PWY-7183	pyrimidine nucleobases salvage I
AK40_2484	PWY-7884	AK40_2484
AK40_2491	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AK40_25	PWY-6703	preQ<sub>0</sub> biosynthesis
AK40_2500	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AK40_2500	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AK40_2500	PWY-7953	AK40_2500
AK40_2501	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AK40_2501	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AK40_2501	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AK40_2501	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AK40_2502	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AK40_2502	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AK40_2502	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AK40_2502	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AK40_2503	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AK40_2503	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AK40_2504	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AK40_2504	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AK40_2504	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AK40_2511	PWY-6654	phosphopantothenate biosynthesis III
AK40_2519	PWY-7851	AK40_2519
AK40_2530	PWY-7142	cyanide detoxification II
AK40_2532	PWY-3781	aerobic respiration I (cytochrome c)
AK40_2532	PWY-4521	arsenite oxidation I (respiratory)
AK40_2532	PWY-6692	Fe(II) oxidation
AK40_2532	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AK40_2534	PWY-3781	aerobic respiration I (cytochrome c)
AK40_2534	PWY-4521	arsenite oxidation I (respiratory)
AK40_2534	PWY-6692	Fe(II) oxidation
AK40_2534	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AK40_2538	PWY-5750	itaconate biosynthesis
AK40_2538	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AK40_2538	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
AK40_2539	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AK40_2539	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AK40_2539	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AK40_2539	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AK40_2543	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AK40_2543	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AK40_2561	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AK40_2561	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AK40_2572	PWY-2941	L-lysine biosynthesis II
AK40_2573	PWY-2941	L-lysine biosynthesis II
AK40_2595	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AK40_2595	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AK40_2595	PWY-6936	seleno-amino acid biosynthesis
AK40_2595	PWY-702	L-methionine biosynthesis II
AK40_26	PWY-6700	queuosine biosynthesis
AK40_2626	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
AK40_2626	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
AK40_2627	PWY-6754	<i>S</i>-methyl-5'-thioadenosine degradation I
AK40_2630	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
AK40_2630	PWY-5532	adenosine nucleotides degradation IV
AK40_2630	PWY-5723	Rubisco shunt
AK40_2631	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
AK40_2632	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
AK40_2633	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
AK40_2633	PWY-5389	3-methylthiopropanoate biosynthesis
AK40_2647	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AK40_2647	PWY-6855	chitin degradation I (archaea)
AK40_2647	PWY-6906	chitin derivatives degradation
AK40_2648	PWY-6906	chitin derivatives degradation
AK40_2648	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
AK40_2648	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
AK40_2670	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AK40_2670	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AK40_2679	PWY-7181	pyrimidine deoxyribonucleosides degradation
AK40_2680	PWY-4202	arsenate detoxification I (glutaredoxin)
AK40_2680	PWY-5532	adenosine nucleotides degradation IV
AK40_2680	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AK40_2680	PWY-6608	guanosine nucleotides degradation III
AK40_2680	PWY-6609	adenine and adenosine salvage III
AK40_2680	PWY-6611	adenine and adenosine salvage V
AK40_2680	PWY-6620	guanine and guanosine salvage
AK40_2680	PWY-6627	salinosporamide A biosynthesis
AK40_2680	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
AK40_2680	PWY-7179	purine deoxyribonucleosides degradation I
AK40_2680	PWY-7179-1	purine deoxyribonucleosides degradation
AK40_2681	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
AK40_2703	PWY-7991	AK40_2703
AK40_2704	PWY-6167	flavin biosynthesis II (archaea)
AK40_2704	PWY-6168	flavin biosynthesis III (fungi)
AK40_2704	PWY-7980	AK40_2704
AK40_2705	PWY-6167	flavin biosynthesis II (archaea)
AK40_2705	PWY-6168	flavin biosynthesis III (fungi)
AK40_2705	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AK40_2705	PWY-7991	AK40_2705
AK40_2706	PWY-6167	flavin biosynthesis II (archaea)
AK40_2706	PWY-6168	flavin biosynthesis III (fungi)
AK40_2708	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AK40_2709	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AK40_2711	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AK40_2711	PWY-6578	8-amino-7-oxononanoate biosynthesis III
AK40_2711	PWY-7147	8-amino-7-oxononanoate biosynthesis II
AK40_2712	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AK40_2721	PWY-4981	L-proline biosynthesis II (from arginine)
AK40_2721	PWY-4984	urea cycle
AK40_2721	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AK40_2723	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AK40_2723	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AK40_2724	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AK40_2725	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AK40_2725	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AK40_2729	PWY-3341	L-proline biosynthesis III
AK40_2729	PWY-4981	L-proline biosynthesis II (from arginine)
AK40_2729	PWY-6344	L-ornithine degradation II (Stickland reaction)
AK40_2747	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AK40_2747	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AK40_2747	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AK40_2747	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AK40_2751	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AK40_2751	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AK40_2752	PWY-5482	pyruvate fermentation to acetate II
AK40_2752	PWY-5485	pyruvate fermentation to acetate IV
AK40_2752	PWY-5497	purine nucleobases degradation II (anaerobic)
AK40_2754	PWY-1281	sulfoacetaldehyde degradation I
AK40_2754	PWY-5482	pyruvate fermentation to acetate II
AK40_2754	PWY-5485	pyruvate fermentation to acetate IV
AK40_2754	PWY-5497	purine nucleobases degradation II (anaerobic)
AK40_2754	PWY-6637	sulfolactate degradation II
AK40_2765	PWY-6891	thiazole biosynthesis II (Bacillus)
AK40_2765	PWY-6892	thiazole biosynthesis I (E. coli)
AK40_2765	PWY-7560	methylerythritol phosphate pathway II
AK40_2769	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
AK40_2769	PWY-2201	folate transformations I
AK40_2769	PWY-3841	folate transformations II
AK40_2769	PWY-5030	L-histidine degradation III
AK40_2769	PWY-5497	purine nucleobases degradation II (anaerobic)
AK40_2769	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AK40_2769	PWY-7909	AK40_2769
AK40_2787	PWY-7799	AK40_2787
AK40_2787	PWY-7800	AK40_2787
AK40_2788	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AK40_2788	PWY-6416	quinate degradation II
AK40_2788	PWY-6707	gallate biosynthesis
AK40_2798	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AK40_2798	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AK40_2825	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AK40_2842	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AK40_2842	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AK40_2842	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AK40_2842	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AK40_2843	PWY-2201	folate transformations I
AK40_2843	PWY-3841	folate transformations II
AK40_2843	PWY-7977	AK40_2843
AK40_2844	PWY-2201	folate transformations I
AK40_2844	PWY-3841	folate transformations II
AK40_2851	PWY-2722	trehalose degradation IV
AK40_2851	PWY-2723	trehalose degradation V
AK40_2851	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AK40_2851	PWY-5661	GDP-glucose biosynthesis
AK40_2851	PWY-621	sucrose degradation III (sucrose invertase)
AK40_2851	PWY-7238	sucrose biosynthesis II
AK40_2851	PWY-7385	1,3-propanediol biosynthesis (engineered)
AK40_2855	PWY-6749	CMP-legionaminate biosynthesis I
AK40_2863	PWY-6854	ethylene biosynthesis III (microbes)
AK40_2876	PWY-7560	methylerythritol phosphate pathway II
AK40_2887	PWY-6556	pyrimidine ribonucleosides salvage II
AK40_2887	PWY-7181	pyrimidine deoxyribonucleosides degradation
AK40_2887	PWY-7193	pyrimidine ribonucleosides salvage I
AK40_2887	PWY-7199	pyrimidine deoxyribonucleosides salvage
AK40_2888	PWY-7039	phosphatidate metabolism, as a signaling molecule
AK40_2888	PWY-7817	AK40_2888
AK40_2912	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AK40_2914	PWY-3341	L-proline biosynthesis III
AK40_2914	PWY-4981	L-proline biosynthesis II (from arginine)
AK40_2914	PWY-6344	L-ornithine degradation II (Stickland reaction)
AK40_2918	PWY-5381	pyridine nucleotide cycling (plants)
AK40_2918	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AK40_2918	PWY-7761	AK40_2918
AK40_2920	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AK40_2922	PWY-5269	cardiolipin biosynthesis II
AK40_2922	PWY-5668	cardiolipin biosynthesis I
AK40_2922	PWY-7817	AK40_2922
AK40_2924	PWY-5669	phosphatidylethanolamine biosynthesis I
AK40_2932	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AK40_2932	PWY-5491	diethylphosphate degradation
AK40_2942	PWY-7158	L-phenylalanine degradation V
AK40_2954	PWY-3162	L-tryptophan degradation V (side chain pathway)
AK40_2954	PWY-5057	L-valine degradation II
AK40_2954	PWY-5076	L-leucine degradation III
AK40_2954	PWY-5078	L-isoleucine degradation II
AK40_2954	PWY-5079	L-phenylalanine degradation III
AK40_2954	PWY-5082	L-methionine degradation III
AK40_2954	PWY-5480	pyruvate fermentation to ethanol I
AK40_2954	PWY-5486	pyruvate fermentation to ethanol II
AK40_2954	PWY-5751	phenylethanol biosynthesis
AK40_2954	PWY-6313	serotonin degradation
AK40_2954	PWY-6333	acetaldehyde biosynthesis I
AK40_2954	PWY-6342	noradrenaline and adrenaline degradation
AK40_2954	PWY-6587	pyruvate fermentation to ethanol III
AK40_2954	PWY-6802	salidroside biosynthesis
AK40_2954	PWY-6871	3-methylbutanol biosynthesis
AK40_2954	PWY-7013	L-1,2-propanediol degradation
AK40_2954	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AK40_2954	PWY-7118	chitin degradation to ethanol
AK40_2954	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AK40_2957	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AK40_2957	PWY-6153	autoinducer AI-2 biosynthesis I
AK40_2957	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
AK40_2963	PWY-7193	pyrimidine ribonucleosides salvage I
AK40_2979	PWY-7887	AK40_2979
AK40_2979	PWY-7892	AK40_2979
AK40_2980	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AK40_2990	PWY-6605	adenine and adenosine salvage II
AK40_2990	PWY-6610	adenine and adenosine salvage IV
AK40_2990	PWY-7805	AK40_2990
AK40_2990	PWY-7807	AK40_2990
AK40_2991	PWY-7805	AK40_2991
AK40_2991	PWY-7807	AK40_2991
AK40_2999	PWY-6700	queuosine biosynthesis
AK40_3000	PWY-6700	queuosine biosynthesis
AK40_3011	PWY-5316	nicotine biosynthesis
AK40_3011	PWY-7342	superpathway of nicotine biosynthesis
AK40_3012	PWY-5316	nicotine biosynthesis
AK40_3012	PWY-5381	pyridine nucleotide cycling (plants)
AK40_3012	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AK40_3012	PWY-7342	superpathway of nicotine biosynthesis
AK40_3013	PWY-5316	nicotine biosynthesis
AK40_3013	PWY-7342	superpathway of nicotine biosynthesis
AK40_3014	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AK40_3017	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
AK40_3063	PWY-2161	folate polyglutamylation
AK40_3067	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AK40_3068	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AK40_3068	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AK40_3069	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AK40_3069	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AK40_3070	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AK40_3070	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AK40_3072	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AK40_3091	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AK40_3091	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AK40_3112	PWY-3781	aerobic respiration I (cytochrome c)
AK40_3112	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AK40_3112	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AK40_3112	PWY-5690	TCA cycle II (plants and fungi)
AK40_3112	PWY-6728	methylaspartate cycle
AK40_3112	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AK40_3112	PWY-7254	TCA cycle VII (acetate-producers)
AK40_3112	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AK40_3113	PWY-3781	aerobic respiration I (cytochrome c)
AK40_3113	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AK40_3113	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AK40_3113	PWY-5690	TCA cycle II (plants and fungi)
AK40_3113	PWY-6728	methylaspartate cycle
AK40_3113	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AK40_3113	PWY-7254	TCA cycle VII (acetate-producers)
AK40_3113	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AK40_3181	PWY-6834	spermidine biosynthesis III
AK40_3182	PWY-1042	glycolysis IV (plant cytosol)
AK40_3182	PWY-5484	glycolysis II (from fructose 6-phosphate)
AK40_3182	PWY-6901	superpathway of glucose and xylose degradation
AK40_3182	PWY-7003	glycerol degradation to butanol
AK40_3183	PWY-7851	AK40_3183
AK40_3192	PWY-1622	formaldehyde assimilation I (serine pathway)
AK40_3192	PWY-5392	reductive TCA cycle II
AK40_3192	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AK40_3192	PWY-5690	TCA cycle II (plants and fungi)
AK40_3192	PWY-5913	TCA cycle VI (obligate autotrophs)
AK40_3192	PWY-6728	methylaspartate cycle
AK40_3192	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AK40_3192	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AK40_3192	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AK40_3193	PWY-5913	TCA cycle VI (obligate autotrophs)
AK40_3193	PWY-6549	L-glutamine biosynthesis III
AK40_3193	PWY-6728	methylaspartate cycle
AK40_3193	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AK40_3193	PWY-7124	ethylene biosynthesis V (engineered)
AK40_3193	PWY-7254	TCA cycle VII (acetate-producers)
AK40_3193	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AK40_3198	PWY-1042	glycolysis IV (plant cytosol)
AK40_3198	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AK40_3198	PWY-5484	glycolysis II (from fructose 6-phosphate)
AK40_3198	PWY-5723	Rubisco shunt
AK40_3198	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AK40_3198	PWY-6886	1-butanol autotrophic biosynthesis
AK40_3198	PWY-6901	superpathway of glucose and xylose degradation
AK40_3198	PWY-7003	glycerol degradation to butanol
AK40_3198	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AK40_3198	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AK40_3199	PWY-1042	glycolysis IV (plant cytosol)
AK40_3199	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AK40_3199	PWY-5484	glycolysis II (from fructose 6-phosphate)
AK40_3199	PWY-7385	1,3-propanediol biosynthesis (engineered)
AK40_3200	PWY-4381	fatty acid biosynthesis initiation I
AK40_3200	PWY-5743	3-hydroxypropanoate cycle
AK40_3200	PWY-5744	glyoxylate assimilation
AK40_3200	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AK40_3200	PWY-6722	candicidin biosynthesis
AK40_3201	PWY-4381	fatty acid biosynthesis initiation I
AK40_3201	PWY-5743	3-hydroxypropanoate cycle
AK40_3201	PWY-5744	glyoxylate assimilation
AK40_3201	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AK40_3201	PWY-6722	candicidin biosynthesis
AK40_3207	PWY-7805	AK40_3207
AK40_3207	PWY-7807	AK40_3207
AK40_3211	PWY-1281	sulfoacetaldehyde degradation I
AK40_3211	PWY-5482	pyruvate fermentation to acetate II
AK40_3211	PWY-5485	pyruvate fermentation to acetate IV
AK40_3211	PWY-5497	purine nucleobases degradation II (anaerobic)
AK40_3211	PWY-6637	sulfolactate degradation II
AK40_3214	PWY-7799	AK40_3214
AK40_3214	PWY-7800	AK40_3214
AK40_3237	PWY-4983	L-citrulline-nitric oxide cycle
AK40_3237	PWY-4984	urea cycle
AK40_3237	PWY-5	canavanine biosynthesis
AK40_3237	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AK40_3237	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AK40_3238	PWY-4983	L-citrulline-nitric oxide cycle
AK40_3238	PWY-4984	urea cycle
AK40_3238	PWY-5	canavanine biosynthesis
AK40_3238	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AK40_3238	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AK40_3245	PWY-5482	pyruvate fermentation to acetate II
AK40_3245	PWY-5485	pyruvate fermentation to acetate IV
AK40_3245	PWY-5497	purine nucleobases degradation II (anaerobic)
AK40_3250	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AK40_3250	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AK40_3250	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
AK40_3256	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AK40_3262	PWY-7793	AK40_3262
AK40_329	PWY-7980	AK40_329
AK40_3305	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AK40_3305	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AK40_3305	PWY-7953	AK40_3305
AK40_3306	PWY-5381	pyridine nucleotide cycling (plants)
AK40_3337	PWY-6823	molybdenum cofactor biosynthesis
AK40_3337	PWY-7887	AK40_3337
AK40_3339	PWY-6823	molybdenum cofactor biosynthesis
AK40_3340	PWY-6823	molybdenum cofactor biosynthesis
AK40_3342	PWY-6823	molybdenum cofactor biosynthesis
AK40_3370	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AK40_3370	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AK40_3381	PWY-5964	guanylyl molybdenum cofactor biosynthesis
AK40_3381	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
AK40_3386	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AK40_3386	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
AK40_3387	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AK40_3387	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AK40_34	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AK40_34	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AK40_34	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AK40_34	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AK40_34	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AK40_34	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AK40_34	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AK40_34	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AK40_3410	PWY-6502	oxidized GTP and dGTP detoxification
AK40_3414	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AK40_3414	PWY-6153	autoinducer AI-2 biosynthesis I
AK40_3414	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
AK40_3415	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AK40_3415	PWY-5743	3-hydroxypropanoate cycle
AK40_3415	PWY-5744	glyoxylate assimilation
AK40_3415	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AK40_3415	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AK40_3415	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AK40_3415	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AK40_3448	PWY-6599	guanine and guanosine salvage II
AK40_3448	PWY-6609	adenine and adenosine salvage III
AK40_3448	PWY-6610	adenine and adenosine salvage IV
AK40_3448	PWY-6620	guanine and guanosine salvage
AK40_3469	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AK40_3469	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AK40_3469	PWY-7242	D-fructuronate degradation
AK40_3469	PWY-7310	D-glucosaminate degradation
AK40_3469	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
AK40_3470	PWY-7310	D-glucosaminate degradation
AK40_3475	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AK40_3476	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AK40_3477	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AK40_3478	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AK40_3479	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AK40_3480	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AK40_3480	PWY-5901	2,3-dihydroxybenzoate biosynthesis
AK40_3480	PWY-6406	salicylate biosynthesis I
AK40_3481	PWY-5839	menaquinol-7 biosynthesis
AK40_3481	PWY-5851	demethylmenaquinol-9 biosynthesis
AK40_3481	PWY-5852	demethylmenaquinol-8 biosynthesis I
AK40_3481	PWY-5853	demethylmenaquinol-6 biosynthesis I
AK40_3481	PWY-5890	menaquinol-10 biosynthesis
AK40_3481	PWY-5891	menaquinol-11 biosynthesis
AK40_3481	PWY-5892	menaquinol-12 biosynthesis
AK40_3481	PWY-5895	menaquinol-13 biosynthesis
AK40_3487	PWY-5941	glycogen degradation II (eukaryotic)
AK40_3487	PWY-6731	starch degradation III
AK40_3487	PWY-6737	starch degradation V
AK40_3487	PWY-7238	sucrose biosynthesis II
AK40_3488	PWY-622	starch biosynthesis
AK40_3490	PWY-622	starch biosynthesis
AK40_3490	PWY-7902	AK40_3490
AK40_3491	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AK40_3491	PWY-622	starch biosynthesis
AK40_3491	PWY-7900	AK40_3491
AK40_3494	PWY-5481	pyruvate fermentation to lactate
AK40_3494	PWY-6901	superpathway of glucose and xylose degradation
AK40_3537	PWY-3801	sucrose degradation II (sucrose synthase)
AK40_3537	PWY-5054	sorbitol biosynthesis I
AK40_3537	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
AK40_3537	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AK40_3537	PWY-5659	GDP-mannose biosynthesis
AK40_3537	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AK40_3537	PWY-621	sucrose degradation III (sucrose invertase)
AK40_3537	PWY-622	starch biosynthesis
AK40_3537	PWY-6981	chitin biosynthesis
AK40_3537	PWY-6992	1,5-anhydrofructose degradation
AK40_3537	PWY-7238	sucrose biosynthesis II
AK40_3537	PWY-7347	sucrose biosynthesis III
AK40_3537	PWY-7385	1,3-propanediol biosynthesis (engineered)
AK40_3546	PWY-6854	ethylene biosynthesis III (microbes)
AK40_3557	PWY-3801	sucrose degradation II (sucrose synthase)
AK40_3557	PWY-6527	stachyose degradation
AK40_3557	PWY-7238	sucrose biosynthesis II
AK40_3557	PWY-7343	UDP-glucose biosynthesis
AK40_3557	PWY-7817	AK40_3557
AK40_3558	PWY-6749	CMP-legionaminate biosynthesis I
AK40_3565	PWY-101	photosynthesis light reactions
AK40_3574	PWY-2941	L-lysine biosynthesis II
AK40_3574	PWY-5097	L-lysine biosynthesis VI
AK40_3596	PWY-5484	glycolysis II (from fructose 6-phosphate)
AK40_36	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AK40_36	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AK40_36	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AK40_36	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AK40_36	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AK40_36	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AK40_36	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AK40_36	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AK40_3606	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AK40_3606	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AK40_3615	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AK40_3636	PWY-5481	pyruvate fermentation to lactate
AK40_3636	PWY-6901	superpathway of glucose and xylose degradation
AK40_3654	PWY-1361	benzoyl-CoA degradation I (aerobic)
AK40_3654	PWY-5109	2-methylbutanoate biosynthesis
AK40_3654	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AK40_3654	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AK40_3654	PWY-5177	glutaryl-CoA degradation
AK40_3654	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AK40_3654	PWY-6435	4-hydroxybenzoate biosynthesis V
AK40_3654	PWY-6583	pyruvate fermentation to butanol I
AK40_3654	PWY-6863	pyruvate fermentation to hexanol
AK40_3654	PWY-6883	pyruvate fermentation to butanol II
AK40_3654	PWY-6944	androstenedione degradation
AK40_3654	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AK40_3654	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AK40_3654	PWY-7007	methyl ketone biosynthesis
AK40_3654	PWY-7046	4-coumarate degradation (anaerobic)
AK40_3654	PWY-7094	fatty acid salvage
AK40_3654	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AK40_3654	PWY-735	jasmonic acid biosynthesis
AK40_3654	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AK40_3654	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AK40_3654	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AK40_3654	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
AK40_3654	PWY-7726	AK40_3654
AK40_3654	PWY-7778	AK40_3654
AK40_3654	PWY-7779	AK40_3654
AK40_3657	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
AK40_3657	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AK40_37	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AK40_37	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AK40_37	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AK40_37	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AK40_37	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AK40_37	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AK40_37	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AK40_37	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AK40_3716	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AK40_3716	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AK40_3716	PWY-7953	AK40_3716
AK40_3766	PWY-1042	glycolysis IV (plant cytosol)
AK40_3766	PWY-1622	formaldehyde assimilation I (serine pathway)
AK40_3766	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AK40_3766	PWY-5484	glycolysis II (from fructose 6-phosphate)
AK40_3766	PWY-5723	Rubisco shunt
AK40_3766	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AK40_3766	PWY-6886	1-butanol autotrophic biosynthesis
AK40_3766	PWY-6901	superpathway of glucose and xylose degradation
AK40_3766	PWY-7003	glycerol degradation to butanol
AK40_3766	PWY-7124	ethylene biosynthesis V (engineered)
AK40_3766	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AK40_3767	PWY-1042	glycolysis IV (plant cytosol)
AK40_3767	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AK40_3767	PWY-5484	glycolysis II (from fructose 6-phosphate)
AK40_3767	PWY-5723	Rubisco shunt
AK40_3767	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AK40_3767	PWY-6886	1-butanol autotrophic biosynthesis
AK40_3767	PWY-6901	superpathway of glucose and xylose degradation
AK40_3767	PWY-7003	glycerol degradation to butanol
AK40_3767	PWY-7124	ethylene biosynthesis V (engineered)
AK40_3767	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AK40_3768	PWY-1042	glycolysis IV (plant cytosol)
AK40_3768	PWY-5484	glycolysis II (from fructose 6-phosphate)
AK40_3768	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AK40_3768	PWY-7003	glycerol degradation to butanol
AK40_3769	PWY-1042	glycolysis IV (plant cytosol)
AK40_3769	PWY-5484	glycolysis II (from fructose 6-phosphate)
AK40_3769	PWY-6886	1-butanol autotrophic biosynthesis
AK40_3769	PWY-6901	superpathway of glucose and xylose degradation
AK40_3769	PWY-7003	glycerol degradation to butanol
AK40_3770	PWY-1042	glycolysis IV (plant cytosol)
AK40_3770	PWY-5484	glycolysis II (from fructose 6-phosphate)
AK40_3770	PWY-6901	superpathway of glucose and xylose degradation
AK40_3770	PWY-7003	glycerol degradation to butanol
AK40_3792	PWY-7805	AK40_3792
AK40_3792	PWY-7807	AK40_3792
AK40_3829	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
AK40_3829	PWY-7820	AK40_3829
AK40_3830	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AK40_3830	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AK40_3830	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AK40_3841	PWY-6834	spermidine biosynthesis III
AK40_3860	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
AK40_3865	PWY-7511	protein ubiquitylation
AK40_3899	PWY-3821	galactose degradation III
AK40_3899	PWY-6317	galactose degradation I (Leloir pathway)
AK40_3899	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
AK40_3899	PWY-6527	stachyose degradation
AK40_3899	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
AK40_3899	PWY-7344	UDP-D-galactose biosynthesis
AK40_3902	PWY-3821	galactose degradation III
AK40_3902	PWY-6317	galactose degradation I (Leloir pathway)
AK40_3902	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
AK40_3902	PWY-6527	stachyose degradation
AK40_3902	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
AK40_3902	PWY-7344	UDP-D-galactose biosynthesis
AK40_3903	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
AK40_3903	PWY-7820	AK40_3903
AK40_3910	PWY-3801	sucrose degradation II (sucrose synthase)
AK40_3910	PWY-6527	stachyose degradation
AK40_3910	PWY-7238	sucrose biosynthesis II
AK40_3910	PWY-7343	UDP-glucose biosynthesis
AK40_3910	PWY-7817	AK40_3910
AK40_3915	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AK40_3915	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AK40_3915	PWY-5989	stearate biosynthesis II (bacteria and plants)
AK40_3915	PWY-5994	palmitate biosynthesis I (animals and fungi)
AK40_3915	PWY-6113	superpathway of mycolate biosynthesis
AK40_3915	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AK40_3915	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AK40_3915	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AK40_3915	PWY-7663	gondoate biosynthesis (anaerobic)
AK40_3915	PWY-7664	oleate biosynthesis IV (anaerobic)
AK40_3915	PWY-7858	AK40_3915
AK40_3915	PWYG-321	mycolate biosynthesis
AK40_3923	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AK40_3923	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AK40_3923	PWY-7953	AK40_3923
AK40_394	PWY-5392	reductive TCA cycle II
AK40_394	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AK40_394	PWY-5690	TCA cycle II (plants and fungi)
AK40_394	PWY-5913	TCA cycle VI (obligate autotrophs)
AK40_394	PWY-6728	methylaspartate cycle
AK40_394	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AK40_394	PWY-7254	TCA cycle VII (acetate-producers)
AK40_394	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AK40_3941	PWY-7980	AK40_3941
AK40_3943	PWY-7980	AK40_3943
AK40_3950	PWY-7183	pyrimidine nucleobases salvage I
AK40_3951	PWY-1622	formaldehyde assimilation I (serine pathway)
AK40_3951	PWY-181	photorespiration
AK40_3951	PWY-2161	folate polyglutamylation
AK40_3951	PWY-2201	folate transformations I
AK40_3951	PWY-3661	glycine betaine degradation I
AK40_3951	PWY-3661-1	glycine betaine degradation II (mammalian)
AK40_3951	PWY-3841	folate transformations II
AK40_3951	PWY-5497	purine nucleobases degradation II (anaerobic)
AK40_3966	PWY-7199	pyrimidine deoxyribonucleosides salvage
AK40_3968	PWY-7980	AK40_3968
AK40_3969	PWY-5484	glycolysis II (from fructose 6-phosphate)
AK40_3970	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AK40_3970	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AK40_3970	PWY-7953	AK40_3970
AK40_3971	PWY-1042	glycolysis IV (plant cytosol)
AK40_3971	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AK40_3971	PWY-5484	glycolysis II (from fructose 6-phosphate)
AK40_3971	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AK40_3971	PWY-7385	1,3-propanediol biosynthesis (engineered)
AK40_3974	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AK40_3974	PWY-7177	UTP and CTP dephosphorylation II
AK40_3974	PWY-7185	UTP and CTP dephosphorylation I
AK40_3979	PWY-1361	benzoyl-CoA degradation I (aerobic)
AK40_3979	PWY-5109	2-methylbutanoate biosynthesis
AK40_3979	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AK40_3979	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AK40_3979	PWY-5177	glutaryl-CoA degradation
AK40_3979	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AK40_3979	PWY-6435	4-hydroxybenzoate biosynthesis V
AK40_3979	PWY-6583	pyruvate fermentation to butanol I
AK40_3979	PWY-6863	pyruvate fermentation to hexanol
AK40_3979	PWY-6883	pyruvate fermentation to butanol II
AK40_3979	PWY-6944	androstenedione degradation
AK40_3979	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AK40_3979	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AK40_3979	PWY-7007	methyl ketone biosynthesis
AK40_3979	PWY-7046	4-coumarate degradation (anaerobic)
AK40_3979	PWY-7094	fatty acid salvage
AK40_3979	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AK40_3979	PWY-735	jasmonic acid biosynthesis
AK40_3979	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AK40_3979	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AK40_3979	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AK40_3979	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
AK40_3979	PWY-7726	AK40_3979
AK40_3979	PWY-7778	AK40_3979
AK40_3979	PWY-7779	AK40_3979
AK40_4009	PWY-7799	AK40_4009
AK40_4009	PWY-7800	AK40_4009
AK40_4021	PWY-40	putrescine biosynthesis I
AK40_4021	PWY-6305	putrescine biosynthesis IV
AK40_4026	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AK40_4026	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AK40_4026	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AK40_4026	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AK40_4038	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AK40_4038	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AK40_4039	PWY-1281	sulfoacetaldehyde degradation I
AK40_4039	PWY-5482	pyruvate fermentation to acetate II
AK40_4039	PWY-5485	pyruvate fermentation to acetate IV
AK40_4039	PWY-5497	purine nucleobases degradation II (anaerobic)
AK40_4039	PWY-6637	sulfolactate degradation II
AK40_4041	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AK40_4041	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AK40_4066	PWY-6910	hydroxymethylpyrimidine salvage
AK40_4066	PWY-7356	thiamin salvage IV (yeast)
AK40_4066	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AK40_4072	PWY-7815	AK40_4072
AK40_4072	PWY-7816	AK40_4072
AK40_4072	PWY-7819	AK40_4072
AK40_4097	PWY-6854	ethylene biosynthesis III (microbes)
AK40_4101	PWY-3821	galactose degradation III
AK40_4101	PWY-6317	galactose degradation I (Leloir pathway)
AK40_4101	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
AK40_4101	PWY-6527	stachyose degradation
AK40_4101	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
AK40_4101	PWY-7344	UDP-D-galactose biosynthesis
AK40_4123	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AK40_4126	PWY-7805	AK40_4126
AK40_4126	PWY-7807	AK40_4126
AK40_4158	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AK40_4158	PWY-6596	adenosine nucleotides degradation I
AK40_4158	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AK40_4159	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AK40_4159	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AK40_4160	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
AK40_4161	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
AK40_4162	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
AK40_4182	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AK40_4182	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AK40_4182	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AK40_4182	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AK40_4182	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AK40_4182	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AK40_4197	PWY-7560	methylerythritol phosphate pathway II
AK40_4201	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AK40_4203	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
AK40_4218	PWY-6599	guanine and guanosine salvage II
AK40_4218	PWY-6609	adenine and adenosine salvage III
AK40_4218	PWY-6610	adenine and adenosine salvage IV
AK40_4218	PWY-6620	guanine and guanosine salvage
AK40_422	PWY-5392	reductive TCA cycle II
AK40_422	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AK40_422	PWY-5690	TCA cycle II (plants and fungi)
AK40_422	PWY-5913	TCA cycle VI (obligate autotrophs)
AK40_422	PWY-6728	methylaspartate cycle
AK40_422	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AK40_422	PWY-7254	TCA cycle VII (acetate-producers)
AK40_422	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AK40_4220	PWY-3961	phosphopantothenate biosynthesis II
AK40_4222	PWY-6936	seleno-amino acid biosynthesis
AK40_4223	PWY-5958	acridone alkaloid biosynthesis
AK40_4223	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AK40_4223	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AK40_4224	PWY-5958	acridone alkaloid biosynthesis
AK40_4224	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AK40_4224	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AK40_4226	PWY-6614	tetrahydrofolate biosynthesis
AK40_4227	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AK40_4227	PWY-6148	tetrahydromethanopterin biosynthesis
AK40_4227	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AK40_4227	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AK40_4228	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AK40_4228	PWY-6148	tetrahydromethanopterin biosynthesis
AK40_4228	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AK40_4228	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AK40_4228	PWY-7852	AK40_4228
AK40_4228	PWY-7853	AK40_4228
AK40_4243	PWY-7560	methylerythritol phosphate pathway II
AK40_4244	PWY-7560	methylerythritol phosphate pathway II
AK40_4245	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AK40_4246	PWY-6936	seleno-amino acid biosynthesis
AK40_4246	PWY-7274	D-cycloserine biosynthesis
AK40_4246	PWY-7870	AK40_4246
AK40_4288	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AK40_4289	PWY-7799	AK40_4289
AK40_4289	PWY-7800	AK40_4289
AK40_430	PWY-2941	L-lysine biosynthesis II
AK40_430	PWY-2942	L-lysine biosynthesis III
AK40_430	PWY-5097	L-lysine biosynthesis VI
AK40_430	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
AK40_430	PWY-6559	spermidine biosynthesis II
AK40_430	PWY-6562	norspermidine biosynthesis
AK40_430	PWY-7153	grixazone biosynthesis
AK40_430	PWY-7977	AK40_430
AK40_4303	PWY-7883	AK40_4303
AK40_4323	PWY-31	canavanine degradation
AK40_4323	PWY-4984	urea cycle
AK40_4323	PWY-6305	putrescine biosynthesis IV
AK40_4323	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AK40_4326	PWY-6749	CMP-legionaminate biosynthesis I
AK40_4327	PWY-6749	CMP-legionaminate biosynthesis I
AK40_4331	PWY-4261	glycerol degradation I
AK40_4331	PWY-5530	sorbitol biosynthesis II
AK40_4364	PWY-3341	L-proline biosynthesis III
AK40_4364	PWY-4981	L-proline biosynthesis II (from arginine)
AK40_4364	PWY-6344	L-ornithine degradation II (Stickland reaction)
AK40_4408	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AK40_4408	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AK40_4408	PWY-7953	AK40_4408
AK40_4409	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AK40_4409	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AK40_4409	PWY-7953	AK40_4409
AK40_4413	PWY-6012	acyl carrier protein metabolism I
AK40_4413	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AK40_4413	PWY-6289	petrobactin biosynthesis
AK40_4415	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AK40_442	PWY-4381	fatty acid biosynthesis initiation I
AK40_4449	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AK40_4468	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
AK40_447	PWY-6936	seleno-amino acid biosynthesis
AK40_4483	PWY-6123	inosine-5'-phosphate biosynthesis I
AK40_4483	PWY-7234	inosine-5'-phosphate biosynthesis III
AK40_4485	PWY-6123	inosine-5'-phosphate biosynthesis I
AK40_4485	PWY-6124	inosine-5'-phosphate biosynthesis II
AK40_4485	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AK40_4485	PWY-7234	inosine-5'-phosphate biosynthesis III
AK40_4486	PWY-6123	inosine-5'-phosphate biosynthesis I
AK40_4486	PWY-6124	inosine-5'-phosphate biosynthesis II
AK40_4486	PWY-7234	inosine-5'-phosphate biosynthesis III
AK40_4487	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AK40_4487	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AK40_4487	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AK40_4488	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AK40_4488	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AK40_4488	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AK40_4489	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AK40_4489	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AK40_4489	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AK40_4490	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AK40_4490	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AK40_4490	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AK40_4490	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AK40_4491	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AK40_4491	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AK40_4491	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AK40_4492	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AK40_4492	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AK40_4493	PWY-6123	inosine-5'-phosphate biosynthesis I
AK40_4493	PWY-6124	inosine-5'-phosphate biosynthesis II
AK40_4493	PWY-7234	inosine-5'-phosphate biosynthesis III
AK40_4494	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AK40_4494	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AK40_4494	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AK40_4503	PWY-6853	ethylene biosynthesis II (microbes)
AK40_4515	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AK40_4541	PWY-6754	<i>S</i>-methyl-5'-thioadenosine degradation I
AK40_4542	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
AK40_4542	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
AK40_4547	PWY-101	photosynthesis light reactions
AK40_4557	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
AK40_4557	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
AK40_4557	PWY-7717	AK40_4557
AK40_4557	PWY-7733	AK40_4557
AK40_4557	PWY-7734	AK40_4557
AK40_4557	PWY-7765	AK40_4557
AK40_4573	PWY-6897	thiamin salvage II
AK40_4573	PWY-7356	thiamin salvage IV (yeast)
AK40_4573	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AK40_4574	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AK40_4574	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AK40_4574	PWY-6897	thiamin salvage II
AK40_4574	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AK40_4574	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AK40_4574	PWY-7356	thiamin salvage IV (yeast)
AK40_4574	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AK40_4582	PWY-6855	chitin degradation I (archaea)
AK40_4582	PWY-6902	chitin degradation II
AK40_4582	PWY-7822	AK40_4582
AK40_4623	PWY-5392	reductive TCA cycle II
AK40_4623	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AK40_4623	PWY-5690	TCA cycle II (plants and fungi)
AK40_4623	PWY-5913	TCA cycle VI (obligate autotrophs)
AK40_4623	PWY-6728	methylaspartate cycle
AK40_4623	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AK40_4623	PWY-7254	TCA cycle VII (acetate-producers)
AK40_4623	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AK40_463	PWY-5057	L-valine degradation II
AK40_463	PWY-5076	L-leucine degradation III
AK40_463	PWY-5078	L-isoleucine degradation II
AK40_463	PWY-5101	L-isoleucine biosynthesis II
AK40_463	PWY-5103	L-isoleucine biosynthesis III
AK40_463	PWY-5104	L-isoleucine biosynthesis IV
AK40_463	PWY-5108	L-isoleucine biosynthesis V
AK40_463	PWY-7767	AK40_463
AK40_4633	PWY-7511	protein ubiquitylation
AK40_464	PWY-5101	L-isoleucine biosynthesis II
AK40_464	PWY-5103	L-isoleucine biosynthesis III
AK40_464	PWY-5104	L-isoleucine biosynthesis IV
AK40_464	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AK40_464	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AK40_464	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AK40_464	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AK40_4646	PWY-5480	pyruvate fermentation to ethanol I
AK40_4646	PWY-5485	pyruvate fermentation to acetate IV
AK40_4646	PWY-5493	reductive monocarboxylic acid cycle
AK40_4648	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AK40_4648	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AK40_4648	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AK40_4648	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AK40_4648	PWY-7817	AK40_4648
AK40_465	PWY-5101	L-isoleucine biosynthesis II
AK40_465	PWY-5103	L-isoleucine biosynthesis III
AK40_465	PWY-5104	L-isoleucine biosynthesis IV
AK40_465	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AK40_465	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AK40_465	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AK40_465	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AK40_466	PWY-5103	L-isoleucine biosynthesis III
AK40_466	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AK40_4668	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AK40_467	PWY-5101	L-isoleucine biosynthesis II
AK40_467	PWY-5103	L-isoleucine biosynthesis III
AK40_467	PWY-5104	L-isoleucine biosynthesis IV
AK40_467	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AK40_4703	PWY-7019	butirosin biosynthesis
AK40_4705	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AK40_4705	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AK40_4705	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AK40_4705	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AK40_4709	PWY-6700	queuosine biosynthesis
AK40_4750	PWY-1881	formate oxidation to CO<sub>2</sub>
AK40_4750	PWY-5497	purine nucleobases degradation II (anaerobic)
AK40_4750	PWY-6696	oxalate degradation III
AK40_4750	PWY-7985	AK40_4750
AK40_4757	PWY-5381	pyridine nucleotide cycling (plants)
AK40_4770	PWY-5392	reductive TCA cycle II
AK40_4770	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AK40_4770	PWY-5690	TCA cycle II (plants and fungi)
AK40_4770	PWY-5913	TCA cycle VI (obligate autotrophs)
AK40_4770	PWY-6728	methylaspartate cycle
AK40_4770	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AK40_4770	PWY-7254	TCA cycle VII (acetate-producers)
AK40_4770	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AK40_4832	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AK40_4832	PWY-5723	Rubisco shunt
AK40_4837	PWY-7782	AK40_4837
AK40_4837	PWY-7783	AK40_4837
AK40_4839	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AK40_4843	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
AK40_4863	PWY-3781	aerobic respiration I (cytochrome c)
AK40_4863	PWY-4521	arsenite oxidation I (respiratory)
AK40_4863	PWY-6692	Fe(II) oxidation
AK40_4863	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AK40_4908	PWY-6899	base-degraded thiamin salvage
AK40_4908	PWY-7356	thiamin salvage IV (yeast)
AK40_4912	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AK40_4912	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AK40_4912	PWY-6897	thiamin salvage II
AK40_4912	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AK40_4912	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AK40_4912	PWY-7356	thiamin salvage IV (yeast)
AK40_4912	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AK40_4913	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AK40_4913	PWY-7806	AK40_4913
AK40_4915	PWY-6891	thiazole biosynthesis II (Bacillus)
AK40_4915	PWY-6892	thiazole biosynthesis I (E. coli)
AK40_4916	PWY-6891	thiazole biosynthesis II (Bacillus)
AK40_4916	PWY-6892	thiazole biosynthesis I (E. coli)
AK40_4917	PWY-6910	hydroxymethylpyrimidine salvage
AK40_4917	PWY-7356	thiamin salvage IV (yeast)
AK40_4917	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AK40_4988	PWY-7511	protein ubiquitylation
AK40_50	PWY-723	alkylnitronates degradation
AK40_500	PWY-6654	phosphopantothenate biosynthesis III
AK40_5022	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AK40_5022	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AK40_5038	PWY-5101	L-isoleucine biosynthesis II
AK40_5038	PWY-5103	L-isoleucine biosynthesis III
AK40_5038	PWY-5104	L-isoleucine biosynthesis IV
AK40_5038	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AK40_5038	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AK40_5038	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AK40_5038	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AK40_5039	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AK40_514	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
AK40_5145	PWY-5669	phosphatidylethanolamine biosynthesis I
AK40_516	PWY-7181	pyrimidine deoxyribonucleosides degradation
AK40_517	PWY-6556	pyrimidine ribonucleosides salvage II
AK40_517	PWY-7181	pyrimidine deoxyribonucleosides degradation
AK40_517	PWY-7193	pyrimidine ribonucleosides salvage I
AK40_517	PWY-7199	pyrimidine deoxyribonucleosides salvage
AK40_5209	PWY-4261	glycerol degradation I
AK40_5210	PWY-4261	glycerol degradation I
AK40_5210	PWY-6118	glycerol-3-phosphate shuttle
AK40_5210	PWY-6952	glycerophosphodiester degradation
AK40_5217	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AK40_5217	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AK40_5217	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AK40_5217	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AK40_5248	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AK40_5248	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AK40_5248	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AK40_5248	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AK40_5249	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
AK40_5249	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AK40_5249	PWY-7766	AK40_5249
AK40_5251	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AK40_5267	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AK40_5267	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AK40_5298	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AK40_5298	PWY-7118	chitin degradation to ethanol
AK40_5298	PWY-7294	xylose degradation IV
AK40_5298	PWY-7295	L-arabinose degradation IV
AK40_5298	PWY-7854	AK40_5298
AK40_5299	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AK40_5320	PWY-3341	L-proline biosynthesis III
AK40_5320	PWY-4981	L-proline biosynthesis II (from arginine)
AK40_5320	PWY-6344	L-ornithine degradation II (Stickland reaction)
AK40_5320	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AK40_5344	PWY-4381	fatty acid biosynthesis initiation I
AK40_5370	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AK40_5370	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AK40_5370	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
AK40_5374	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AK40_5374	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AK40_5374	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AK40_5374	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AK40_5385	PWY-3221	dTDP-L-rhamnose biosynthesis II
AK40_5385	PWY-6808	dTDP-D-forosamine biosynthesis
AK40_5385	PWY-6942	dTDP-D-desosamine biosynthesis
AK40_5385	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AK40_5385	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
AK40_5385	PWY-6974	dTDP-L-olivose biosynthesis
AK40_5385	PWY-6976	dTDP-L-mycarose biosynthesis
AK40_5385	PWY-7104	dTDP-L-megosamine biosynthesis
AK40_5385	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
AK40_5385	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
AK40_5385	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AK40_5385	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
AK40_5385	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
AK40_5385	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
AK40_5385	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
AK40_5385	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
AK40_5385	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
AK40_5385	PWY-7688	AK40_5385
AK40_5385	PWY-7814	AK40_5385
AK40_5387	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AK40_5387	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AK40_5387	PWY-5989	stearate biosynthesis II (bacteria and plants)
AK40_5387	PWY-6113	superpathway of mycolate biosynthesis
AK40_5387	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AK40_5387	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AK40_5387	PWY-7663	gondoate biosynthesis (anaerobic)
AK40_5387	PWY-7664	oleate biosynthesis IV (anaerobic)
AK40_5387	PWY-7858	AK40_5387
AK40_5387	PWYG-321	mycolate biosynthesis
AK40_5403	PWY-5958	acridone alkaloid biosynthesis
AK40_5403	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AK40_5403	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AK40_5404	PWY-5958	acridone alkaloid biosynthesis
AK40_5404	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AK40_5404	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AK40_541	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AK40_5421	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AK40_5422	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AK40_543	PWY-5481	pyruvate fermentation to lactate
AK40_543	PWY-6901	superpathway of glucose and xylose degradation
AK40_5456	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AK40_5456	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AK40_548	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AK40_5494	PWY-5676	acetyl-CoA fermentation to butanoate II
AK40_5494	PWY-5741	ethylmalonyl-CoA pathway
AK40_5494	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AK40_5494	PWY-7948	AK40_5494
AK40_550	PWY-4381	fatty acid biosynthesis initiation I
AK40_583	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AK40_583	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AK40_586	PWY-702	L-methionine biosynthesis II
AK40_5994	PWY-3841	folate transformations II
AK40_5994	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AK40_5994	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AK40_5994	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AK40_5994	PWY-7199	pyrimidine deoxyribonucleosides salvage
AK40_5994	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AK40_6224	PWY-7883	AK40_6224
AK40_6286	PWY-7883	AK40_6286
AK40_638	PWY-0	putrescine degradation III
AK40_638	PWY-6117	spermine and spermidine degradation I
AK40_638	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AK40_66	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
AK40_677	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AK40_683	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
AK40_683	PWY-6167	flavin biosynthesis II (archaea)
AK40_683	PWY-6168	flavin biosynthesis III (fungi)
AK40_683	PWY-7863	AK40_683
AK40_684	PWY-5647	2-nitrobenzoate degradation I
AK40_684	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
AK40_684	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
AK40_684	PWY-6505	L-tryptophan degradation XII (Geobacillus)
AK40_689	PWY-5162	2-oxopentenoate degradation
AK40_689	PWY-5436	L-threonine degradation IV
AK40_689	PWY-5480	pyruvate fermentation to ethanol I
AK40_689	PWY-6587	pyruvate fermentation to ethanol III
AK40_689	PWY-7085	triethylamine degradation
AK40_689	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
AK40_690	PWY-5162	2-oxopentenoate degradation
AK40_696	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AK40_730	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
AK40_730	PWY-2161	folate polyglutamylation
AK40_730	PWY-2201	folate transformations I
AK40_730	PWY-3841	folate transformations II
AK40_748	PWY-6748	nitrate reduction VII (denitrification)
AK40_749	PWY-6748	nitrate reduction VII (denitrification)
AK40_753	PWY-6823	molybdenum cofactor biosynthesis
AK40_755	PWY-6823	molybdenum cofactor biosynthesis
AK40_756	PWY-6823	molybdenum cofactor biosynthesis
AK40_756	PWY-7887	AK40_756
AK40_760	PWY-5194	siroheme biosynthesis
AK40_760	PWY-5196	factor 430 biosynthesis
AK40_760	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AK40_761	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AK40_762	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AK40_762	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AK40_762	PWY-5194	siroheme biosynthesis
AK40_762	PWY-5196	factor 430 biosynthesis
AK40_762	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AK40_764	PWY-6683	sulfate reduction III (assimilatory)
AK40_79	PWY-5057	L-valine degradation II
AK40_79	PWY-5076	L-leucine degradation III
AK40_79	PWY-5078	L-isoleucine degradation II
AK40_79	PWY-5101	L-isoleucine biosynthesis II
AK40_79	PWY-5103	L-isoleucine biosynthesis III
AK40_79	PWY-5104	L-isoleucine biosynthesis IV
AK40_79	PWY-5108	L-isoleucine biosynthesis V
AK40_79	PWY-7767	AK40_79
AK40_8	PWY-6832	2-aminoethylphosphonate degradation II
AK40_80	PWY-5101	L-isoleucine biosynthesis II
AK40_80	PWY-5103	L-isoleucine biosynthesis III
AK40_80	PWY-5104	L-isoleucine biosynthesis IV
AK40_80	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AK40_80	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AK40_80	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AK40_80	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AK40_81	PWY-5101	L-isoleucine biosynthesis II
AK40_81	PWY-5103	L-isoleucine biosynthesis III
AK40_81	PWY-5104	L-isoleucine biosynthesis IV
AK40_81	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AK40_81	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AK40_81	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AK40_81	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AK40_82	PWY-5103	L-isoleucine biosynthesis III
AK40_82	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AK40_83	PWY-6871	3-methylbutanol biosynthesis
AK40_84	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AK40_844	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AK40_844	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AK40_858	PWY-3841	folate transformations II
AK40_858	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AK40_858	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AK40_858	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AK40_858	PWY-7199	pyrimidine deoxyribonucleosides salvage
AK40_858	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AK40_859	PWY-3841	folate transformations II
AK40_859	PWY-6614	tetrahydrofolate biosynthesis
AK40_862	PWY-5667	CDP-diacylglycerol biosynthesis I
AK40_862	PWY-5981	CDP-diacylglycerol biosynthesis III
AK40_862	PWY-6453	stigma estolide biosynthesis
AK40_862	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AK40_862	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
AK40_862	PWY-7587	oleate biosynthesis III (cyanobacteria)
AK40_862	PWY-7589	palmitoleate biosynthesis III (cyanobacteria)
AK40_862	PWY-7782	AK40_862
AK40_951	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AK40_951	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AK40_951	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AK40_951	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AK40_957	PWY-5747	2-methylcitrate cycle II
AK40_960	PWY-5642	2,4-dinitrotoluene degradation
AK40_973	PWY-5901	2,3-dihydroxybenzoate biosynthesis
AK40_974	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AK40_974	PWY-5901	2,3-dihydroxybenzoate biosynthesis
AK40_974	PWY-6406	salicylate biosynthesis I
AK40_980	PWY-6012	acyl carrier protein metabolism I
AK40_980	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AK40_980	PWY-6289	petrobactin biosynthesis
AK40_99	PWY-5669	phosphatidylethanolamine biosynthesis I