AK40_1	PF02386	Cation transport protein
AK40_10	PF00455	AK40_10
AK40_10	PF08220	DeoR-like helix-turn-helix domain
AK40_100	PF00884	Sulfatase
AK40_1000	PF02535	AK40_1000
AK40_1001	PF13649	Methyltransferase domain
AK40_1002	PF09951	AK40_1002
AK40_1002	PF10077	AK40_1002
AK40_1004	PF00753	Metallo-beta-lactamase superfamily
AK40_1005	PF01156	Inosine-uridine preferring nucleoside hydrolase
AK40_1006	PF10386	Protein of unknown function (DUF2441)
AK40_1008	PF14470	Bacterial PH domain
AK40_1009	PF13673	Acetyltransferase (GNAT) domain
AK40_101	PF13027	AK40_101
AK40_1010	PF00753	Metallo-beta-lactamase superfamily
AK40_1011	PF00440	Bacterial regulatory proteins, tetR family
AK40_1012	PF03176	MMPL family
AK40_1013	PF13213	AK40_1013
AK40_1014	PF00302	Chloramphenicol acetyltransferase
AK40_1015	PF00583	Acetyltransferase (GNAT) family
AK40_1016	PF13508	Acetyltransferase (GNAT) domain
AK40_1016	PF13599	Pentapeptide repeats (9 copies)
AK40_1017	PF00583	Acetyltransferase (GNAT) family
AK40_1018	PF00892	EamA-like transporter family
AK40_1019	PF01381	Helix-turn-helix
AK40_1019	PF07883	Cupin domain
AK40_102	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
AK40_102	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
AK40_1021	PF09388	Spo0E like sporulation regulatory protein
AK40_1022	PF00561	alpha/beta hydrolase fold
AK40_1023	PF01593	Flavin containing amine oxidoreductase
AK40_1025	PF08241	Methyltransferase domain
AK40_1026	PF13302	Acetyltransferase (GNAT) domain
AK40_1027	PF14169	AK40_1027
AK40_1028	PF00313	'Cold-shock' DNA-binding domain
AK40_1029	PF02517	CAAX protease self-immunity
AK40_103	PF10055	AK40_103
AK40_1030	PF13238	AAA domain
AK40_1031	PF00491	Arginase family
AK40_1033	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AK40_1033	PF03466	LysR substrate binding domain
AK40_1034	PF01118	Semialdehyde dehydrogenase, NAD binding domain
AK40_1034	PF02774	Semialdehyde dehydrogenase, dimerisation domain
AK40_1035	PF03417	Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase
AK40_1037	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AK40_1037	PF03466	LysR substrate binding domain
AK40_1038	PF03473	MOSC domain
AK40_1038	PF03475	3-alpha domain
AK40_1039	PF13527	Acetyltransferase (GNAT) domain
AK40_104	PF01507	Phosphoadenosine phosphosulfate reductase family
AK40_1040	PF07081	Protein of unknown function (DUF1349)
AK40_1041	PF00005	ABC transporter
AK40_1041	PF00664	ABC transporter transmembrane region
AK40_1042	PF00005	ABC transporter
AK40_1042	PF00664	ABC transporter transmembrane region
AK40_1044	PF01520	N-acetylmuramoyl-L-alanine amidase
AK40_1044	PF12123	N-acetylmuramoyl-l-alanine amidase
AK40_1045	PF01810	AK40_1045
AK40_1046	PF01381	Helix-turn-helix
AK40_1046	PF07883	Cupin domain
AK40_1048	PF13799	AK40_1048
AK40_1049	PF13799	AK40_1049
AK40_105	PF01747	ATP-sulfurylase
AK40_105	PF14306	PUA-like domain
AK40_1050	PF01391	Collagen triple helix repeat (20 copies)
AK40_1052	PF00190	Cupin
AK40_1053	PF02824	TGS domain
AK40_1053	PF13328	HD domain
AK40_1055	PF01593	Flavin containing amine oxidoreductase
AK40_1056	PF04542	Sigma-70 region 2
AK40_1056	PF08281	Sigma-70, region 4
AK40_1058	PF01596	O-methyltransferase
AK40_1059	PF05816	AK40_1059
AK40_106	PF01583	Adenylylsulphate kinase
AK40_1060	PF13120	AK40_1060
AK40_1061	PF02638	AK40_1061
AK40_1062	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AK40_1063	PF02378	Phosphotransferase system, EIIC
AK40_1065	PF03702	Uncharacterised protein family (UPF0075)
AK40_1066	PF01869	BadF/BadG/BcrA/BcrD ATPase family
AK40_1067	PF02660	AK40_1067
AK40_1068	PF00266	Aminotransferase class-V
AK40_1068	PF13444	Acetyltransferase (GNAT) domain
AK40_1069	PF00291	Pyridoxal-phosphate dependent enzyme
AK40_107	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
AK40_107	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
AK40_1070	PF06803	AK40_1070
AK40_1071	PF09346	SMI1 / KNR4 family (SUKH-1)
AK40_1073	PF00753	Metallo-beta-lactamase superfamily
AK40_1076	PF00270	DEAD/DEAH box helicase
AK40_1076	PF00271	Helicase conserved C-terminal domain
AK40_1078	PF00440	Bacterial regulatory proteins, tetR family
AK40_108	PF13046	AK40_108
AK40_1081	PF02687	AK40_1081
AK40_1082	PF00005	ABC transporter
AK40_1083	PF13649	Methyltransferase domain
AK40_1084	PF06983	3-demethylubiquinone-9 3-methyltransferase
AK40_1085	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AK40_1086	PF00589	Phage integrase family
AK40_1086	PF14659	Phage integrase, N-terminal SAM-like domain
AK40_1087	PF14657	AK40_1087
AK40_109	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
AK40_1093	PF01391	Collagen triple helix repeat (20 copies)
AK40_1094	PF00386	C1q domain
AK40_1096	PF03354	AK40_1096
AK40_110	PF01903	CbiX
AK40_1100	PF00205	Thiamine pyrophosphate enzyme, central domain
AK40_1100	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AK40_1101	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AK40_1102	PF12802	MarR family
AK40_1103	PF00300	Histidine phosphatase superfamily (branch 1)
AK40_1104	PF14171	Toxin SpoIISA, type II toxin-antitoxin system
AK40_1109	PF01546	Peptidase family M20/M25/M40
AK40_1109	PF07687	Peptidase dimerisation domain
AK40_111	PF13241	Putative NAD(P)-binding
AK40_111	PF14824	Sirohaem biosynthesis protein central
AK40_1111	PF16723	AK40_1111
AK40_1112	PF00132	Bacterial transferase hexapeptide (six repeats)
AK40_1113	PF00768	D-alanyl-D-alanine carboxypeptidase
AK40_1113	PF07943	Penicillin-binding protein 5, C-terminal domain
AK40_1114	PF13472	GDSL-like Lipase/Acylhydrolase family
AK40_1115	PF00905	Penicillin binding protein transpeptidase domain
AK40_1115	PF03717	Penicillin-binding Protein dimerisation domain
AK40_1115	PF05223	NTF2-like N-terminal transpeptidase domain
AK40_1116	PF04542	Sigma-70 region 2
AK40_1116	PF08281	Sigma-70, region 4
AK40_1118	PF00905	Penicillin binding protein transpeptidase domain
AK40_1118	PF03717	Penicillin-binding Protein dimerisation domain
AK40_1119	PF00905	Penicillin binding protein transpeptidase domain
AK40_1119	PF03717	Penicillin-binding Protein dimerisation domain
AK40_112	PF00209	Sodium:neurotransmitter symporter family
AK40_1120	PF13354	Beta-lactamase enzyme family
AK40_1122	PF00356	Bacterial regulatory proteins, lacI family
AK40_1122	PF13377	Periplasmic binding protein-like domain
AK40_1123	PF07690	Major Facilitator Superfamily
AK40_1124	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
AK40_1124	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
AK40_1125	PF00294	pfkB family carbohydrate kinase
AK40_1126	PF00171	Aldehyde dehydrogenase family
AK40_1127	PF00205	Thiamine pyrophosphate enzyme, central domain
AK40_1127	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AK40_1127	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AK40_1128	PF01261	Xylose isomerase-like TIM barrel
AK40_1129	PF01116	Fructose-bisphosphate aldolase class-II
AK40_113	PF01551	Peptidase family M23
AK40_1130	PF04962	KduI/IolB family
AK40_1132	PF12867	DinB superfamily
AK40_1135	PF00149	Calcineurin-like phosphoesterase
AK40_1135	PF02872	5'-nucleotidase, C-terminal domain
AK40_1138	PF01381	Helix-turn-helix
AK40_114	PF00375	Sodium:dicarboxylate symporter family
AK40_1141	PF02557	D-alanyl-D-alanine carboxypeptidase
AK40_1142	PF11518	Protein of unknown function (DUF3221)
AK40_1143	PF00395	S-layer homology domain
AK40_1143	PF01520	N-acetylmuramoyl-L-alanine amidase
AK40_1144	PF07968	Leukocidin/Hemolysin toxin family
AK40_1145	PF00440	Bacterial regulatory proteins, tetR family
AK40_1146	PF00005	ABC transporter
AK40_1147	PF00563	EAL domain
AK40_1147	PF00990	GGDEF domain
AK40_1147	PF13426	PAS domain
AK40_1148	PF13302	Acetyltransferase (GNAT) domain
AK40_1149	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AK40_1149	PF00672	HAMP domain
AK40_1149	PF02743	Cache domain
AK40_115	PF04167	Protein of unknown function (DUF402)
AK40_1150	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AK40_1151	PF00581	Rhodanese-like domain
AK40_1151	PF00753	Metallo-beta-lactamase superfamily
AK40_1154	PF04463	AK40_1154
AK40_1154	PF08349	AK40_1154
AK40_1155	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AK40_1155	PF02770	Acyl-CoA dehydrogenase, middle domain
AK40_1155	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AK40_1156	PF00289	Carbamoyl-phosphate synthase L chain, N-terminal domain
AK40_1156	PF02785	Biotin carboxylase C-terminal domain
AK40_1156	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AK40_1157	PF00364	Biotin-requiring enzyme
AK40_1158	PF00682	HMGL-like
AK40_1159	PF00378	Enoyl-CoA hydratase/isomerase family
AK40_116	PF03553	AK40_116
AK40_1160	PF01039	Carboxyl transferase domain
AK40_1161	PF00501	AMP-binding enzyme
AK40_1161	PF13193	AMP-binding enzyme C-terminal domain
AK40_1161	PF16177	AK40_1161
AK40_1163	PF13302	Acetyltransferase (GNAT) domain
AK40_1164	PF13238	AAA domain
AK40_1167	PF05163	DinB family
AK40_1168	PF00768	D-alanyl-D-alanine carboxypeptidase
AK40_1169	PF00512	His Kinase A (phospho-acceptor) domain
AK40_1169	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_1170	PF00072	Response regulator receiver domain
AK40_1170	PF00486	Transcriptional regulatory protein, C terminal
AK40_1171	PF01966	HD domain
AK40_1172	PF01048	Phosphorylase superfamily
AK40_1173	PF13460	NADH(P)-binding
AK40_1174	PF00583	Acetyltransferase (GNAT) family
AK40_1174	PF13673	Acetyltransferase (GNAT) domain
AK40_1176	PF01447	Thermolysin metallopeptidase, catalytic domain
AK40_1176	PF02868	Thermolysin metallopeptidase, alpha-helical domain
AK40_1176	PF07504	Fungalysin/Thermolysin Propeptide Motif
AK40_1176	PF16403	AK40_1176
AK40_1179	PF08327	Activator of Hsp90 ATPase homolog 1-like protein
AK40_118	PF04012	AK40_118
AK40_1180	PF00005	ABC transporter
AK40_1181	PF03551	Transcriptional regulator PadR-like family
AK40_1183	PF00144	Beta-lactamase
AK40_1184	PF13411	MerR HTH family regulatory protein
AK40_1184	PF14526	Integron-associated effector binding protein
AK40_1185	PF07690	Major Facilitator Superfamily
AK40_1187	PF13649	Methyltransferase domain
AK40_1189	PF01636	Phosphotransferase enzyme family
AK40_119	PF09922	Cell wall-active antibiotics response protein (DUF2154)
AK40_1190	PF01636	Phosphotransferase enzyme family
AK40_1191	PF12833	Helix-turn-helix domain
AK40_1192	PF01432	Peptidase family M3
AK40_1193	PF13222	AK40_1193
AK40_1194	PF00155	Aminotransferase class I and II
AK40_1194	PF00392	Bacterial regulatory proteins, gntR family
AK40_12	PF00395	S-layer homology domain
AK40_12	PF05031	Iron Transport-associated domain
AK40_12	PF12799	Leucine Rich repeats (2 copies)
AK40_120	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_120	PF07730	Histidine kinase
AK40_1201	PF08241	Methyltransferase domain
AK40_1202	PF13649	Methyltransferase domain
AK40_1203	PF08450	SMP-30/Gluconolaconase/LRE-like region
AK40_1204	PF09963	AK40_1204
AK40_1205	PF01921	tRNA synthetases class I (K)
AK40_1206	PF07486	Cell Wall Hydrolase
AK40_1207	PF03069	Acetamidase/Formamidase family
AK40_1208	PF00072	Response regulator receiver domain
AK40_1208	PF00486	Transcriptional regulatory protein, C terminal
AK40_1209	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_121	PF00072	Response regulator receiver domain
AK40_121	PF00196	Bacterial regulatory proteins, luxR family
AK40_1211	PF00005	ABC transporter
AK40_1211	PF12848	ABC transporter
AK40_1212	PF13302	Acetyltransferase (GNAT) domain
AK40_1213	PF11667	AK40_1213
AK40_1214	PF00005	ABC transporter
AK40_1215	PF02687	AK40_1215
AK40_1216	PF17294	AK40_1216
AK40_1217	PF13053	AK40_1217
AK40_1218	PF05057	Putative serine esterase (DUF676)
AK40_1219	PF00742	Homoserine dehydrogenase
AK40_1219	PF03447	Homoserine dehydrogenase, NAD binding domain
AK40_122	PF13059	AK40_122
AK40_1220	PF00155	Aminotransferase class I and II
AK40_1220	PF00392	Bacterial regulatory proteins, gntR family
AK40_1221	PF01820	D-ala D-ala ligase N-terminus
AK40_1221	PF07478	D-ala D-ala ligase C-terminus
AK40_1222	PF03070	TENA/THI-4/PQQC family
AK40_123	PF05525	AK40_123
AK40_1231	PF13032	AK40_1231
AK40_1231	PF13111	AK40_1231
AK40_1232	PF13105	AK40_1232
AK40_1237	PF08874	AK40_1237
AK40_1237	PF12395	AK40_1237
AK40_1239	PF00067	Cytochrome P450
AK40_1240	PF07690	Major Facilitator Superfamily
AK40_1241	PF00132	Bacterial transferase hexapeptide (six repeats)
AK40_1242	PF07561	AK40_1242
AK40_1243	PF03551	Transcriptional regulator PadR-like family
AK40_1244	PF00067	Cytochrome P450
AK40_1245	PF05995	Cysteine dioxygenase type I
AK40_1246	PF08282	haloacid dehalogenase-like hydrolase
AK40_1247	PF00512	His Kinase A (phospho-acceptor) domain
AK40_1247	PF00989	PAS fold
AK40_1247	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_1247	PF08448	PAS fold
AK40_1248	PF00905	Penicillin binding protein transpeptidase domain
AK40_1248	PF03717	Penicillin-binding Protein dimerisation domain
AK40_1249	PF00201	UDP-glucoronosyl and UDP-glucosyl transferase
AK40_125	PF08241	Methyltransferase domain
AK40_1250	PF01177	Asp/Glu/Hydantoin racemase
AK40_1251	PF07155	ECF-type riboflavin transporter, S component
AK40_1252	PF00005	ABC transporter
AK40_1252	PF12558	AK40_1252
AK40_1253	PF02361	Cobalt transport protein
AK40_1254	PF09680	AK40_1254
AK40_1255	PF00512	His Kinase A (phospho-acceptor) domain
AK40_1255	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_1255	PF07694	5TMR of 5TMR-LYT
AK40_1256	PF00069	Protein kinase domain
AK40_1257	PF04229	GrpB protein
AK40_1258	PF00107	Zinc-binding dehydrogenase
AK40_1258	PF08240	Alcohol dehydrogenase GroES-like domain
AK40_1259	PF01569	PAP2 superfamily
AK40_1260	PF00905	Penicillin binding protein transpeptidase domain
AK40_1260	PF03717	Penicillin-binding Protein dimerisation domain
AK40_1260	PF03793	PASTA domain
AK40_1261	PF00440	Bacterial regulatory proteins, tetR family
AK40_1261	PF08360	QacR-like protein, C-terminal region
AK40_1262	PF00106	short chain dehydrogenase
AK40_1263	PF07690	Major Facilitator Superfamily
AK40_1264	PF00144	Beta-lactamase
AK40_1265	PF00583	Acetyltransferase (GNAT) family
AK40_1266	PF11385	AK40_1266
AK40_1267	PF02645	Uncharacterised protein, DegV family COG1307
AK40_1268	PF01965	DJ-1/PfpI family
AK40_1269	PF00239	Resolvase, N terminal domain
AK40_1270	PF08279	HTH domain
AK40_1270	PF13280	AK40_1270
AK40_1271	PF01965	DJ-1/PfpI family
AK40_1272	PF00583	Acetyltransferase (GNAT) family
AK40_1275	PF13411	MerR HTH family regulatory protein
AK40_1275	PF13847	Methyltransferase domain
AK40_1276	PF07690	Major Facilitator Superfamily
AK40_1279	PF13673	Acetyltransferase (GNAT) domain
AK40_1280	PF03009	Glycerophosphoryl diester phosphodiesterase family
AK40_1283	PF14091	AK40_1283
AK40_1284	PF00155	Aminotransferase class I and II
AK40_1284	PF00392	Bacterial regulatory proteins, gntR family
AK40_1285	PF00892	EamA-like transporter family
AK40_1286	PF00583	Acetyltransferase (GNAT) family
AK40_1287	PF03091	CutA1 divalent ion tolerance protein
AK40_1288	PF00293	NUDIX domain
AK40_1290	PF00144	Beta-lactamase
AK40_1292	PF07690	Major Facilitator Superfamily
AK40_1293	PF00293	NUDIX domain
AK40_1294	PF00712	DNA polymerase III beta subunit, N-terminal domain
AK40_1294	PF02767	DNA polymerase III beta subunit, central domain
AK40_1294	PF02768	DNA polymerase III beta subunit, C-terminal domain
AK40_1295	PF00293	NUDIX domain
AK40_1296	PF00561	alpha/beta hydrolase fold
AK40_1297	PF12706	Beta-lactamase superfamily domain
AK40_1298	PF14528	LAGLIDADG-like domain
AK40_13	PF00596	Class II Aldolase and Adducin N-terminal domain
AK40_130	PF00042	Globin
AK40_130	PF00175	Oxidoreductase NAD-binding domain
AK40_130	PF00970	Oxidoreductase FAD-binding domain
AK40_1300	PF00300	Histidine phosphatase superfamily (branch 1)
AK40_1301	PF09234	Domain of unknown function (DUF1963)
AK40_1302	PF09350	AK40_1302
AK40_1303	PF00756	Putative esterase
AK40_1305	PF14176	AK40_1305
AK40_1306	PF01734	Patatin-like phospholipase
AK40_1307	PF08000	Bacterial PH domain
AK40_1309	PF12867	DinB superfamily
AK40_131	PF00027	Cyclic nucleotide-binding domain
AK40_1310	PF13302	Acetyltransferase (GNAT) domain
AK40_1311	PF12831	FAD dependent oxidoreductase
AK40_1312	PF02673	AK40_1312
AK40_1314	PF01541	GIY-YIG catalytic domain
AK40_1315	PF00583	Acetyltransferase (GNAT) family
AK40_1317	PF07995	Glucose / Sorbosone dehydrogenase
AK40_1320	PF00293	NUDIX domain
AK40_1321	PF01266	FAD dependent oxidoreductase
AK40_1322	PF13376	AK40_1322
AK40_1323	PF00797	N-acetyltransferase
AK40_1324	PF08877	MepB protein
AK40_1326	PF13419	Haloacid dehalogenase-like hydrolase
AK40_1327	PF12867	DinB superfamily
AK40_1328	PF08921	Domain of unknown function (DUF1904)
AK40_1329	PF01569	PAP2 superfamily
AK40_133	PF01925	AK40_133
AK40_1330	PF00128	Alpha amylase, catalytic domain
AK40_1330	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
AK40_1330	PF03714	Bacterial pullanase-associated domain
AK40_1331	PF01447	Thermolysin metallopeptidase, catalytic domain
AK40_1331	PF02868	Thermolysin metallopeptidase, alpha-helical domain
AK40_1331	PF07504	Fungalysin/Thermolysin Propeptide Motif
AK40_1332	PF13490	Putative zinc-finger
AK40_1332	PF13786	Domain of unknown function (DUF4179)
AK40_1333	PF04542	Sigma-70 region 2
AK40_1333	PF08281	Sigma-70, region 4
AK40_1334	PF06445	GyrI-like small molecule binding domain
AK40_1336	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AK40_1337	PF00344	SecY translocase
AK40_1338	PF11638	DnaA N-terminal domain
AK40_1339	PF00892	EamA-like transporter family
AK40_134	PF01384	AK40_134
AK40_1340	PF00155	Aminotransferase class I and II
AK40_1340	PF00392	Bacterial regulatory proteins, gntR family
AK40_1341	PF00561	alpha/beta hydrolase fold
AK40_1345	PF08002	Protein of unknown function (DUF1697)
AK40_1346	PF06081	AK40_1346
AK40_1347	PF00583	Acetyltransferase (GNAT) family
AK40_1349	PF09580	AK40_1349
AK40_135	PF01865	Protein of unknown function DUF47
AK40_1350	PF14620	AK40_1350
AK40_1351	PF01471	Putative peptidoglycan binding domain
AK40_1351	PF07486	Cell Wall Hydrolase
AK40_1352	PF13028	Protein of unknown function (DUF3889)
AK40_1353	PF00144	Beta-lactamase
AK40_1354	PF03301	Tryptophan 2,3-dioxygenase
AK40_1355	PF04199	Putative cyclase
AK40_1356	PF00266	Aminotransferase class-V
AK40_1357	PF00440	Bacterial regulatory proteins, tetR family
AK40_1358	PF00293	NUDIX domain
AK40_1359	PF08327	Activator of Hsp90 ATPase homolog 1-like protein
AK40_136	PF00905	Penicillin binding protein transpeptidase domain
AK40_136	PF00912	Transglycosylase
AK40_1360	PF13129	AK40_1360
AK40_1361	PF13122	AK40_1361
AK40_1362	PF00158	Sigma-54 interaction domain
AK40_1362	PF01590	GAF domain
AK40_1362	PF02954	Bacterial regulatory protein, Fis family
AK40_1364	PF07978	NIPSNAP
AK40_1365	PF00583	Acetyltransferase (GNAT) family
AK40_1366	PF00455	AK40_1366
AK40_1366	PF08220	DeoR-like helix-turn-helix domain
AK40_1368	PF13649	Methyltransferase domain
AK40_1369	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AK40_1370	PF02082	Transcriptional regulator
AK40_1371	PF13315	AK40_1371
AK40_1373	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AK40_1373	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AK40_1374	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
AK40_1374	PF00364	Biotin-requiring enzyme
AK40_1374	PF02817	e3 binding domain
AK40_1375	PF02779	Transketolase, pyrimidine binding domain
AK40_1375	PF02780	Transketolase, C-terminal domain
AK40_1376	PF00676	Dehydrogenase E1 component
AK40_1377	PF12867	DinB superfamily
AK40_1378	PF00106	short chain dehydrogenase
AK40_1379	PF04229	GrpB protein
AK40_138	PF01391	Collagen triple helix repeat (20 copies)
AK40_1380	PF00485	Phosphoribulokinase / Uridine kinase family
AK40_1381	PF13789	AK40_1381
AK40_1382	PF00293	NUDIX domain
AK40_1383	PF13789	AK40_1383
AK40_1384	PF13672	Protein phosphatase 2C
AK40_1385	PF01230	HIT domain
AK40_1387	PF00528	Binding-protein-dependent transport system inner membrane component
AK40_1388	PF00005	ABC transporter
AK40_1388	PF00571	CBS domain
AK40_1389	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
AK40_139	PF00512	His Kinase A (phospho-acceptor) domain
AK40_139	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_139	PF13426	PAS domain
AK40_1390	PF00574	Clp protease
AK40_1391	PF04542	Sigma-70 region 2
AK40_1391	PF08281	Sigma-70, region 4
AK40_1392	PF00111	2Fe-2S iron-sulfur cluster binding domain
AK40_1393	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
AK40_1394	PF13673	Acetyltransferase (GNAT) domain
AK40_1395	PF00041	Fibronectin type III domain
AK40_1395	PF03067	Chitin binding domain
AK40_1397	PF10990	AK40_1397
AK40_1398	PF08241	Methyltransferase domain
AK40_1399	PF04237	YjbR
AK40_14	PF00571	CBS domain
AK40_140	PF01904	Protein of unknown function DUF72
AK40_1400	PF00583	Acetyltransferase (GNAT) family
AK40_1401	PF00395	S-layer homology domain
AK40_1401	PF00753	Metallo-beta-lactamase superfamily
AK40_1402	PF11213	Protein of unknown function (DUF3006)
AK40_1403	PF01183	Glycosyl hydrolases family 25
AK40_1403	PF12123	N-acetylmuramoyl-l-alanine amidase
AK40_1404	PF00583	Acetyltransferase (GNAT) family
AK40_1406	PF13354	Beta-lactamase enzyme family
AK40_1407	PF13420	Acetyltransferase (GNAT) domain
AK40_1409	PF03551	Transcriptional regulator PadR-like family
AK40_141	PF13062	AK40_141
AK40_1410	PF06108	Protein of unknown function (DUF952)
AK40_1411	PF13245	Part of AAA domain
AK40_1411	PF13361	UvrD-like helicase C-terminal domain
AK40_1411	PF13538	UvrD-like helicase C-terminal domain
AK40_1412	PF02517	CAAX protease self-immunity
AK40_1413	PF13649	Methyltransferase domain
AK40_1414	PF06094	AIG2-like family
AK40_1415	PF00270	DEAD/DEAH box helicase
AK40_1415	PF00271	Helicase conserved C-terminal domain
AK40_1415	PF00570	HRDC domain
AK40_1415	PF09382	RQC domain
AK40_1415	PF14493	AK40_1415
AK40_1415	PF16124	AK40_1415
AK40_142	PF00589	Phage integrase family
AK40_1421	PF13209	AK40_1421
AK40_1422	PF01432	Peptidase family M3
AK40_1423	PF01368	DHH family
AK40_1423	PF02833	DHHA2 domain
AK40_1424	PF03067	Chitin binding domain
AK40_1425	PF00583	Acetyltransferase (GNAT) family
AK40_1426	PF02627	Carboxymuconolactone decarboxylase family
AK40_1427	PF01235	AK40_1427
AK40_1428	PF00171	Aldehyde dehydrogenase family
AK40_1429	PF00701	Dihydrodipicolinate synthetase family
AK40_143	PF00512	His Kinase A (phospho-acceptor) domain
AK40_143	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_1430	PF05544	Proline racemase
AK40_1431	PF05544	Proline racemase
AK40_1432	PF01266	FAD dependent oxidoreductase
AK40_1433	PF00158	Sigma-54 interaction domain
AK40_1433	PF02954	Bacterial regulatory protein, Fis family
AK40_1433	PF13596	PAS domain
AK40_1434	PF04324	BFD-like [2Fe-2S] binding domain
AK40_1435	PF13510	2Fe-2S iron-sulfur cluster binding domain
AK40_1436	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AK40_1437	PF10850	AK40_1437
AK40_1439	PF08876	AK40_1439
AK40_144	PF01048	Phosphorylase superfamily
AK40_1440	PF09335	AK40_1440
AK40_1441	PF12867	DinB superfamily
AK40_1443	PF04914	DltD C-terminal region
AK40_1444	PF13302	Acetyltransferase (GNAT) domain
AK40_1445	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AK40_1446	PF00877	NlpC/P60 family
AK40_1447	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
AK40_1447	PF13378	Enolase C-terminal domain-like
AK40_1448	PF12986	Domain of unknown function (DUF3870)
AK40_1449	PF04977	Septum formation initiator
AK40_1451	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
AK40_1454	PF13649	Methyltransferase domain
AK40_1456	PF02129	X-Pro dipeptidyl-peptidase (S15 family)
AK40_1456	PF08530	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
AK40_1457	PF00512	His Kinase A (phospho-acceptor) domain
AK40_1457	PF00672	HAMP domain
AK40_1457	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_1458	PF00072	Response regulator receiver domain
AK40_1458	PF00486	Transcriptional regulatory protein, C terminal
AK40_146	PF03706	AK40_146
AK40_146	PF09924	Uncharacterized conserved protein (DUF2156)
AK40_1460	PF13673	Acetyltransferase (GNAT) domain
AK40_1462	PF01048	Phosphorylase superfamily
AK40_1462	PF13419	Haloacid dehalogenase-like hydrolase
AK40_1463	PF03808	AK40_1463
AK40_1464	PF01432	Peptidase family M3
AK40_1465	PF13520	Amino acid permease
AK40_1466	PF01037	AsnC family
AK40_1466	PF13412	Winged helix-turn-helix DNA-binding
AK40_1467	PF02645	Uncharacterised protein, DegV family COG1307
AK40_1468	PF07552	AK40_1468
AK40_1470	PF07552	AK40_1470
AK40_1471	PF00583	Acetyltransferase (GNAT) family
AK40_1474	PF07690	Major Facilitator Superfamily
AK40_1475	PF04519	AK40_1475
AK40_1476	PF04519	AK40_1476
AK40_1477	PF13171	AK40_1477
AK40_1478	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AK40_1478	PF12793	AK40_1478
AK40_1479	PF07690	Major Facilitator Superfamily
AK40_148	PF13047	AK40_148
AK40_1480	PF14172	AK40_1480
AK40_1483	PF04226	AK40_1483
AK40_1484	PF01156	Inosine-uridine preferring nucleoside hydrolase
AK40_1485	PF13113	AK40_1485
AK40_1486	PF08241	Methyltransferase domain
AK40_1489	PF07690	Major Facilitator Superfamily
AK40_149	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
AK40_149	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
AK40_1492	PF00155	Aminotransferase class I and II
AK40_1493	PF07977	FabA-like domain
AK40_1494	PF03630	Fumble
AK40_1495	PF13563	2'-5' RNA ligase superfamily
AK40_1496	PF07301	AK40_1496
AK40_1497	PF13261	AK40_1497
AK40_1498	PF00005	ABC transporter
AK40_1499	PF00392	Bacterial regulatory proteins, gntR family
AK40_15	PF04748	Divergent polysaccharide deacetylase
AK40_150	PF00768	D-alanyl-D-alanine carboxypeptidase
AK40_150	PF07943	Penicillin-binding protein 5, C-terminal domain
AK40_1503	PF09501	AK40_1503
AK40_1504	PF09501	AK40_1504
AK40_1505	PF09501	AK40_1505
AK40_1506	PF09501	AK40_1506
AK40_1507	PF01594	AK40_1507
AK40_1508	PF14279	AK40_1508
AK40_1509	PF00296	Luciferase-like monooxygenase
AK40_151	PF07670	Nucleoside recognition
AK40_1510	PF00528	Binding-protein-dependent transport system inner membrane component
AK40_1511	PF09084	NMT1/THI5 like
AK40_1512	PF00005	ABC transporter
AK40_1513	PF04167	Protein of unknown function (DUF402)
AK40_1514	PF00293	NUDIX domain
AK40_1516	PF12688	Tetratrico peptide repeat
AK40_1517	PF04127	DNA / pantothenate metabolism flavoprotein
AK40_1518	PF02522	Aminoglycoside 3-N-acetyltransferase
AK40_1520	PF03738	Glutathionylspermidine synthase preATP-grasp
AK40_1522	PF13673	Acetyltransferase (GNAT) domain
AK40_1523	PF13536	Multidrug resistance efflux transporter
AK40_1524	PF04978	Protein of unknown function (DUF664)
AK40_1525	PF13420	Acetyltransferase (GNAT) domain
AK40_1526	PF13302	Acetyltransferase (GNAT) domain
AK40_1527	PF01909	Nucleotidyltransferase domain
AK40_1528	PF08713	DNA alkylation repair enzyme
AK40_153	PF00849	RNA pseudouridylate synthase
AK40_153	PF01479	S4 domain
AK40_1530	PF01522	Polysaccharide deacetylase
AK40_1531	PF12952	AK40_1531
AK40_1532	PF03741	AK40_1532
AK40_1533	PF00884	Sulfatase
AK40_1534	PF00005	ABC transporter
AK40_1534	PF12848	ABC transporter
AK40_1536	PF03176	MMPL family
AK40_1537	PF00440	Bacterial regulatory proteins, tetR family
AK40_1537	PF16295	AK40_1537
AK40_1538	PF13527	Acetyltransferase (GNAT) domain
AK40_1538	PF13530	Sterol carrier protein domain
AK40_1539	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
AK40_154	PF00578	AhpC/TSA family
AK40_1540	PF02153	Prephenate dehydrogenase
AK40_1541	PF00155	Aminotransferase class I and II
AK40_1542	PF01264	Chorismate synthase
AK40_1543	PF00793	DAHP synthetase I family
AK40_1543	PF01817	Chorismate mutase type II
AK40_1544	PF13212	AK40_1544
AK40_1544	PF13289	AK40_1544
AK40_1545	PF10710	AK40_1545
AK40_1546	PF00857	Isochorismatase family
AK40_1547	PF13523	Acetyltransferase (GNAT) domain
AK40_1548	PF14118	AK40_1548
AK40_1549	PF13671	AAA domain
AK40_155	PF05140	AK40_155
AK40_1551	PF06725	3D domain
AK40_1551	PF08239	Bacterial SH3 domain
AK40_1552	PF13302	Acetyltransferase (GNAT) domain
AK40_1554	PF00378	Enoyl-CoA hydratase/isomerase family
AK40_1555	PF00501	AMP-binding enzyme
AK40_1555	PF13193	AMP-binding enzyme C-terminal domain
AK40_1556	PF00158	Sigma-54 interaction domain
AK40_1556	PF00989	PAS fold
AK40_1556	PF02954	Bacterial regulatory protein, Fis family
AK40_1556	PF13426	PAS domain
AK40_1558	PF10094	AK40_1558
AK40_1559	PF06039	AK40_1559
AK40_156	PF01578	AK40_156
AK40_1560	PF13407	Periplasmic binding protein domain
AK40_1561	PF02653	AK40_1561
AK40_1562	PF02653	AK40_1562
AK40_1563	PF00005	ABC transporter
AK40_1564	PF04198	Putative sugar-binding domain
AK40_1565	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
AK40_1565	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
AK40_1566	PF07883	Cupin domain
AK40_1567	PF01791	DeoC/LacD family aldolase
AK40_1568	PF13302	Acetyltransferase (GNAT) domain
AK40_157	PF00072	Response regulator receiver domain
AK40_157	PF00486	Transcriptional regulatory protein, C terminal
AK40_1570	PF01909	Nucleotidyltransferase domain
AK40_1572	PF03992	Antibiotic biosynthesis monooxygenase
AK40_1573	PF07690	Major Facilitator Superfamily
AK40_1574	PF01022	Bacterial regulatory protein, arsR family
AK40_1575	PF12867	DinB superfamily
AK40_1576	PF01773	Na+ dependent nucleoside transporter N-terminus
AK40_1576	PF07662	Na+ dependent nucleoside transporter C-terminus
AK40_1577	PF00171	Aldehyde dehydrogenase family
AK40_1578	PF00696	Amino acid kinase family
AK40_1578	PF01472	PUA domain
AK40_1579	PF03807	NADP oxidoreductase coenzyme F420-dependent
AK40_1579	PF14748	Pyrroline-5-carboxylate reductase dimerisation
AK40_158	PF00512	His Kinase A (phospho-acceptor) domain
AK40_158	PF00672	HAMP domain
AK40_158	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_1580	PF01546	Peptidase family M20/M25/M40
AK40_1581	PF01614	Bacterial transcriptional regulator
AK40_1581	PF09339	IclR helix-turn-helix domain
AK40_1582	PF00324	Amino acid permease
AK40_1583	PF01139	tRNA-splicing ligase RtcB
AK40_1584	PF00487	AK40_1584
AK40_1585	PF00245	Alkaline phosphatase
AK40_1586	PF11188	AK40_1586
AK40_1587	PF13443	Cro/C1-type HTH DNA-binding domain
AK40_1589	PF13026	Protein of unknown function (DUF3887)
AK40_159	PF01923	Cobalamin adenosyltransferase
AK40_1590	PF10086	AK40_1590
AK40_1591	PF14501	GHKL domain
AK40_1592	PF00072	Response regulator receiver domain
AK40_1592	PF04397	LytTr DNA-binding domain
AK40_1593	PF00485	Phosphoribulokinase / Uridine kinase family
AK40_1594	PF13302	Acetyltransferase (GNAT) domain
AK40_1595	PF12681	Glyoxalase-like domain
AK40_1597	PF11193	AK40_1597
AK40_1598	PF03551	Transcriptional regulator PadR-like family
AK40_1599	PF07726	ATPase family associated with various cellular activities (AAA)
AK40_16	PF09388	Spo0E like sporulation regulatory protein
AK40_160	PF01476	LysM domain
AK40_160	PF01551	Peptidase family M23
AK40_1600	PF01882	AK40_1600
AK40_1601	PF13210	AK40_1601
AK40_1602	PF07690	Major Facilitator Superfamily
AK40_1604	PF00535	Glycosyl transferase family 2
AK40_1607	PF00535	Glycosyl transferase family 2
AK40_1608	PF00535	Glycosyl transferase family 2
AK40_1610	PF00202	Aminotransferase class-III
AK40_1611	PF00199	Catalase
AK40_1611	PF06628	Catalase-related immune-responsive
AK40_1613	PF01979	Amidohydrolase family
AK40_1613	PF13382	Adenine deaminase C-terminal domain
AK40_1614	PF00144	Beta-lactamase
AK40_1615	PF13042	AK40_1615
AK40_1617	PF14568	SMI1-KNR4 cell-wall
AK40_1619	PF03992	Antibiotic biosynthesis monooxygenase
AK40_162	PF12822	Protein of unknown function (DUF3816)
AK40_1620	PF00881	Nitroreductase family
AK40_1621	PF01047	MarR family
AK40_1622	PF00009	Elongation factor Tu GTP binding domain
AK40_1622	PF00679	Elongation factor G C-terminus
AK40_1622	PF03764	Elongation factor G, domain IV
AK40_1622	PF14492	Elongation Factor G, domain II
AK40_1624	PF00293	NUDIX domain
AK40_1625	PF14118	AK40_1625
AK40_1626	PF13346	AK40_1626
AK40_1627	PF00005	ABC transporter
AK40_1628	PF00392	Bacterial regulatory proteins, gntR family
AK40_1629	PF14568	SMI1-KNR4 cell-wall
AK40_163	PF13370	4Fe-4S single cluster domain
AK40_1630	PF01370	NAD dependent epimerase/dehydratase family
AK40_1631	PF00005	ABC transporter
AK40_1632	PF02687	AK40_1632
AK40_1632	PF12704	MacB-like periplasmic core domain
AK40_1633	PF02687	AK40_1633
AK40_1635	PF00144	Beta-lactamase
AK40_1636	PF12833	Helix-turn-helix domain
AK40_1636	PF14526	Integron-associated effector binding protein
AK40_1637	PF00583	Acetyltransferase (GNAT) family
AK40_1638	PF13140	AK40_1638
AK40_1639	PF00293	NUDIX domain
AK40_164	PF14493	AK40_164
AK40_1640	PF00892	EamA-like transporter family
AK40_1641	PF00155	Aminotransferase class I and II
AK40_1641	PF00392	Bacterial regulatory proteins, gntR family
AK40_1642	PF02639	AK40_1642
AK40_1643	PF13031	AK40_1643
AK40_1644	PF10978	AK40_1644
AK40_1645	PF00485	Phosphoribulokinase / Uridine kinase family
AK40_1646	PF12850	Calcineurin-like phosphoesterase superfamily domain
AK40_1647	PF01636	Phosphotransferase enzyme family
AK40_1648	PF13468	Glyoxalase-like domain
AK40_1649	PF01925	AK40_1649
AK40_165	PF00270	DEAD/DEAH box helicase
AK40_165	PF00271	Helicase conserved C-terminal domain
AK40_1650	PF13302	Acetyltransferase (GNAT) domain
AK40_1651	PF00324	Amino acid permease
AK40_1652	PF01521	Iron-sulphur cluster biosynthesis
AK40_1653	PF08713	DNA alkylation repair enzyme
AK40_1654	PF10898	AK40_1654
AK40_1657	PF00293	NUDIX domain
AK40_1658	PF04989	Cephalosporin hydroxylase
AK40_1659	PF00717	Peptidase S24-like
AK40_166	PF02517	CAAX protease self-immunity
AK40_1660	PF00905	Penicillin binding protein transpeptidase domain
AK40_1660	PF03717	Penicillin-binding Protein dimerisation domain
AK40_1662	PF02146	Sir2 family
AK40_1663	PF01470	Pyroglutamyl peptidase
AK40_1664	PF06166	AK40_1664
AK40_1665	PF06149	AK40_1665
AK40_1666	PF03746	LamB/YcsF family
AK40_1667	PF02626	Allophanate hydrolase subunit 2
AK40_1668	PF02682	Allophanate hydrolase subunit 1
AK40_1669	PF01614	Bacterial transcriptional regulator
AK40_1669	PF09339	IclR helix-turn-helix domain
AK40_167	PF01476	LysM domain
AK40_1670	PF00717	Peptidase S24-like
AK40_1671	PF03932	CutC family
AK40_1672	PF07454	AK40_1672
AK40_1673	PF12840	Helix-turn-helix domain
AK40_1674	PF12867	DinB superfamily
AK40_1675	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AK40_1675	PF02770	Acyl-CoA dehydrogenase, middle domain
AK40_1675	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AK40_1676	PF02698	DUF218 domain
AK40_1677	PF13302	Acetyltransferase (GNAT) domain
AK40_1679	PF07670	Nucleoside recognition
AK40_168	PF12850	Calcineurin-like phosphoesterase superfamily domain
AK40_1680	PF01636	Phosphotransferase enzyme family
AK40_1681	PF00583	Acetyltransferase (GNAT) family
AK40_1682	PF10903	AK40_1682
AK40_1683	PF12051	AK40_1683
AK40_1684	PF00440	Bacterial regulatory proteins, tetR family
AK40_1684	PF14278	AK40_1684
AK40_1685	PF00391	PEP-utilising enzyme, mobile domain
AK40_1685	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
AK40_1686	PF00753	Metallo-beta-lactamase superfamily
AK40_1687	PF09678	AK40_1687
AK40_1688	PF10002	AK40_1688
AK40_1689	PF07875	AK40_1689
AK40_169	PF13411	MerR HTH family regulatory protein
AK40_1691	PF08892	AK40_1691
AK40_1692	PF01810	AK40_1692
AK40_1693	PF00324	Amino acid permease
AK40_1695	PF00269	Small, acid-soluble spore proteins, alpha/beta type
AK40_1696	PF10710	AK40_1696
AK40_1697	PF11553	Protein of unknown function (DUF3231)
AK40_1698	PF00269	Small, acid-soluble spore proteins, alpha/beta type
AK40_1699	PF00107	Zinc-binding dehydrogenase
AK40_1699	PF08240	Alcohol dehydrogenase GroES-like domain
AK40_1699	PF13823	Alcohol dehydrogenase GroES-associated
AK40_17	PF00512	His Kinase A (phospho-acceptor) domain
AK40_17	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_17	PF02743	Cache domain
AK40_17	PF11346	AK40_17
AK40_170	PF05389	Negative regulator of genetic competence (MecA)
AK40_1700	PF05067	Manganese containing catalase
AK40_1701	PF00206	Lyase
AK40_1701	PF10415	Fumarase C C-terminus
AK40_1702	PF00710	Asparaginase
AK40_1703	PF01381	Helix-turn-helix
AK40_1704	PF13333	AK40_1704
AK40_1705	PF05504	Spore germination B3/ GerAC like, C-terminal
AK40_1706	PF03845	AK40_1706
AK40_1707	PF03323	AK40_1707
AK40_1708	PF00512	His Kinase A (phospho-acceptor) domain
AK40_1708	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_1708	PF08448	PAS fold
AK40_1708	PF13426	PAS domain
AK40_1709	PF05791	Bacillus haemolytic enterotoxin (HBL)
AK40_171	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AK40_171	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
AK40_1710	PF05791	Bacillus haemolytic enterotoxin (HBL)
AK40_1711	PF05791	Bacillus haemolytic enterotoxin (HBL)
AK40_1712	PF05791	Bacillus haemolytic enterotoxin (HBL)
AK40_1713	PF12833	Helix-turn-helix domain
AK40_1715	PF13520	Amino acid permease
AK40_1716	PF03807	NADP oxidoreductase coenzyme F420-dependent
AK40_1716	PF14748	Pyrroline-5-carboxylate reductase dimerisation
AK40_1717	PF00072	Response regulator receiver domain
AK40_1717	PF08664	AK40_1717
AK40_1718	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_1719	PF04960	Glutaminase
AK40_1721	PF01235	AK40_1721
AK40_1722	PF03600	Citrate transporter
AK40_1724	PF00413	Matrixin
AK40_1726	PF00144	Beta-lactamase
AK40_1727	PF05139	Erythromycin esterase
AK40_1728	PF00149	Calcineurin-like phosphoesterase
AK40_1728	PF02872	5'-nucleotidase, C-terminal domain
AK40_1729	PF03992	Antibiotic biosynthesis monooxygenase
AK40_173	PF13106	AK40_173
AK40_1730	PF08921	Domain of unknown function (DUF1904)
AK40_1731	PF01609	Transposase DDE domain
AK40_1732	PF01609	Transposase DDE domain
AK40_1733	PF01544	CorA-like Mg2+ transporter protein
AK40_1736	PF11181	AK40_1736
AK40_1737	PF06486	Protein of unknown function (DUF1093)
AK40_1738	PF12695	Alpha/beta hydrolase family
AK40_1739	PF03073	TspO/MBR family
AK40_174	PF01510	N-acetylmuramoyl-L-alanine amidase
AK40_1740	PF00875	DNA photolyase
AK40_1740	PF03441	FAD binding domain of DNA photolyase
AK40_1741	PF05368	NmrA-like family
AK40_1742	PF01047	MarR family
AK40_1743	PF12952	AK40_1743
AK40_1744	PF00512	His Kinase A (phospho-acceptor) domain
AK40_1744	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_1745	PF00072	Response regulator receiver domain
AK40_1745	PF00486	Transcriptional regulatory protein, C terminal
AK40_1746	PF00398	Ribosomal RNA adenine dimethylase
AK40_1747	PF03551	Transcriptional regulator PadR-like family
AK40_1748	PF07690	Major Facilitator Superfamily
AK40_1749	PF01266	FAD dependent oxidoreductase
AK40_175	PF13738	Pyridine nucleotide-disulphide oxidoreductase
AK40_1750	PF07859	alpha/beta hydrolase fold
AK40_1752	PF10070	AK40_1752
AK40_1753	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
AK40_1753	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
AK40_1754	PF10057	AK40_1754
AK40_1756	PF01882	AK40_1756
AK40_1757	PF07726	ATPase family associated with various cellular activities (AAA)
AK40_1758	PF01040	UbiA prenyltransferase family
AK40_1759	PF00561	alpha/beta hydrolase fold
AK40_176	PF00710	Asparaginase
AK40_1760	PF12996	AK40_1760
AK40_1760	PF13524	Glycosyl transferases group 1
AK40_1762	PF00005	ABC transporter
AK40_1763	PF02687	AK40_1763
AK40_1764	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_1764	PF13877	AK40_1764
AK40_1765	PF00072	Response regulator receiver domain
AK40_1765	PF00196	Bacterial regulatory proteins, luxR family
AK40_1766	PF01297	Periplasmic solute binding protein family
AK40_1767	PF00950	AK40_1767
AK40_1768	PF00005	ABC transporter
AK40_1769	PF01965	DJ-1/PfpI family
AK40_177	PF17313	AK40_177
AK40_1770	PF01636	Phosphotransferase enzyme family
AK40_1771	PF00485	Phosphoribulokinase / Uridine kinase family
AK40_1772	PF01451	Low molecular weight phosphotyrosine protein phosphatase
AK40_1773	PF01758	Sodium Bile acid symporter family
AK40_1774	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AK40_1775	PF01022	Bacterial regulatory protein, arsR family
AK40_1777	PF06889	AK40_1777
AK40_1779	PF00012	Hsp70 protein
AK40_178	PF02224	Cytidylate kinase
AK40_1780	PF07690	Major Facilitator Superfamily
AK40_1781	PF01546	Peptidase family M20/M25/M40
AK40_1781	PF07687	Peptidase dimerisation domain
AK40_1782	PF13086	AAA domain
AK40_1782	PF13087	AAA domain
AK40_1783	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AK40_1784	PF06993	AK40_1784
AK40_1786	PF08803	Putative mono-oxygenase ydhR
AK40_1787	PF00067	Cytochrome P450
AK40_1787	PF00175	Oxidoreductase NAD-binding domain
AK40_1787	PF00258	Flavodoxin
AK40_1787	PF00667	FAD binding domain
AK40_1788	PF07690	Major Facilitator Superfamily
AK40_179	PF00575	S1 RNA binding domain
AK40_1793	PF00072	Response regulator receiver domain
AK40_1793	PF00486	Transcriptional regulatory protein, C terminal
AK40_1794	PF00512	His Kinase A (phospho-acceptor) domain
AK40_1794	PF00672	HAMP domain
AK40_1794	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_1794	PF06691	AK40_1794
AK40_1796	PF03734	L,D-transpeptidase catalytic domain
AK40_1796	PF12229	Putative peptidoglycan binding domain
AK40_1799	PF00291	Pyridoxal-phosphate dependent enzyme
AK40_18	PF01047	MarR family
AK40_180	PF01070	FMN-dependent dehydrogenase
AK40_1800	PF00149	Calcineurin-like phosphoesterase
AK40_1800	PF13285	AK40_1800
AK40_1801	PF00144	Beta-lactamase
AK40_1804	PF00753	Metallo-beta-lactamase superfamily
AK40_1805	PF01370	NAD dependent epimerase/dehydratase family
AK40_1806	PF02655	ATP-grasp domain
AK40_1807	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
AK40_1807	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
AK40_181	PF14140	AK40_181
AK40_1810	PF02073	Thermophilic metalloprotease (M29)
AK40_1811	PF02517	CAAX protease self-immunity
AK40_1812	PF13411	MerR HTH family regulatory protein
AK40_1813	PF04072	Leucine carboxyl methyltransferase
AK40_1814	PF13671	AAA domain
AK40_1816	PF00005	ABC transporter
AK40_1818	PF12840	Helix-turn-helix domain
AK40_1819	PF05977	Transmembrane secretion effector
AK40_1820	PF00512	His Kinase A (phospho-acceptor) domain
AK40_1820	PF00672	HAMP domain
AK40_1820	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_1821	PF00072	Response regulator receiver domain
AK40_1821	PF00486	Transcriptional regulatory protein, C terminal
AK40_1823	PF01047	MarR family
AK40_1824	PF00583	Acetyltransferase (GNAT) family
AK40_1825	PF04299	Putative FMN-binding domain
AK40_1826	PF02588	AK40_1826
AK40_1826	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
AK40_1829	PF02016	LD-carboxypeptidase
AK40_183	PF14045	AK40_183
AK40_1830	PF16219	AK40_1830
AK40_1831	PF00581	Rhodanese-like domain
AK40_1831	PF00753	Metallo-beta-lactamase superfamily
AK40_1832	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AK40_1833	PF01447	Thermolysin metallopeptidase, catalytic domain
AK40_1833	PF02868	Thermolysin metallopeptidase, alpha-helical domain
AK40_1833	PF03413	Peptidase propeptide and YPEB domain
AK40_1833	PF07504	Fungalysin/Thermolysin Propeptide Motif
AK40_1834	PF03009	Glycerophosphoryl diester phosphodiesterase family
AK40_1835	PF04892	AK40_1835
AK40_1837	PF00512	His Kinase A (phospho-acceptor) domain
AK40_1837	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_1838	PF00072	Response regulator receiver domain
AK40_1838	PF00486	Transcriptional regulatory protein, C terminal
AK40_1839	PF00144	Beta-lactamase
AK40_1839	PF00395	S-layer homology domain
AK40_1840	PF09932	AK40_1840
AK40_1841	PF07690	Major Facilitator Superfamily
AK40_1842	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
AK40_1842	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
AK40_1843	PF05116	Sucrose-6F-phosphate phosphohydrolase
AK40_1844	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
AK40_1845	PF00356	Bacterial regulatory proteins, lacI family
AK40_1845	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
AK40_1849	PF06268	Fascin domain
AK40_185	PF01926	50S ribosome-binding GTPase
AK40_185	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
AK40_1851	PF00817	impB/mucB/samB family
AK40_1851	PF11798	IMS family HHH motif
AK40_1851	PF11799	impB/mucB/samB family C-terminal domain
AK40_1852	PF13157	AK40_1852
AK40_1854	PF10612	AK40_1854
AK40_1859	PF00589	Phage integrase family
AK40_1859	PF02899	Phage integrase, N-terminal SAM-like domain
AK40_186	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
AK40_186	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
AK40_1860	PF08863	AK40_1860
AK40_1862	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AK40_1862	PF00672	HAMP domain
AK40_1862	PF02743	Cache domain
AK40_1863	PF03222	Tryptophan/tyrosine permease family
AK40_1864	PF03313	AK40_1864
AK40_1865	PF03315	Serine dehydratase beta chain
AK40_1866	PF02661	Fic/DOC family
AK40_1867	PF00202	Aminotransferase class-III
AK40_1868	PF00708	Acylphosphatase
AK40_1868	PF01300	Telomere recombination
AK40_1868	PF07503	HypF finger
AK40_1869	PF00586	AIR synthase related protein, N-terminal domain
AK40_1869	PF02769	AIR synthase related protein, C-terminal domain
AK40_187	PF14069	AK40_187
AK40_1870	PF00857	Isochorismatase family
AK40_1871	PF01037	AsnC family
AK40_1871	PF13412	Winged helix-turn-helix DNA-binding
AK40_1872	PF13520	Amino acid permease
AK40_1874	PF14136	AK40_1874
AK40_1875	PF06245	AK40_1875
AK40_1876	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AK40_1876	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AK40_1877	PF00266	Aminotransferase class-V
AK40_1878	PF04070	AK40_1878
AK40_188	PF10966	AK40_188
AK40_1880	PF07883	Cupin domain
AK40_1881	PF12833	Helix-turn-helix domain
AK40_1882	PF12870	Lumazine-binding domain
AK40_1883	PF14568	SMI1-KNR4 cell-wall
AK40_1884	PF12639	DNase/tRNase domain of colicin-like bacteriocin
AK40_1885	PF01804	Penicillin amidase
AK40_1886	PF07261	Replication initiation and membrane attachment
AK40_1887	PF00395	S-layer homology domain
AK40_1887	PF01510	N-acetylmuramoyl-L-alanine amidase
AK40_1889	PF08713	DNA alkylation repair enzyme
AK40_1890	PF13034	AK40_1890
AK40_1891	PF00395	S-layer homology domain
AK40_1892	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AK40_1893	PF14106	AK40_1893
AK40_1894	PF14044	AK40_1894
AK40_1895	PF07690	Major Facilitator Superfamily
AK40_1896	PF00561	alpha/beta hydrolase fold
AK40_1897	PF01047	MarR family
AK40_1898	PF07690	Major Facilitator Superfamily
AK40_1899	PF00144	Beta-lactamase
AK40_190	PF09547	AK40_190
AK40_1902	PF00005	ABC transporter
AK40_1902	PF13732	AK40_1902
AK40_1903	PF13396	AK40_1903
AK40_1904	PF12840	Helix-turn-helix domain
AK40_1905	PF17314	AK40_1905
AK40_1906	PF00893	Small Multidrug Resistance protein
AK40_1907	PF00440	Bacterial regulatory proteins, tetR family
AK40_1909	PF01289	Thiol-activated cytolysin
AK40_1909	PF17440	AK40_1909
AK40_191	PF00216	Bacterial DNA-binding protein
AK40_1910	PF02667	AK40_1910
AK40_1912	PF02525	Flavodoxin-like fold
AK40_1913	PF04434	AK40_1913
AK40_1916	PF14256	AK40_1916
AK40_1917	PF07155	ECF-type riboflavin transporter, S component
AK40_1918	PF00005	ABC transporter
AK40_1919	PF02361	Cobalt transport protein
AK40_192	PF01227	GTP cyclohydrolase I
AK40_1920	PF14478	Domain of unknown function (DUF4430)
AK40_1921	PF14478	Domain of unknown function (DUF4430)
AK40_1922	PF03737	Demethylmenaquinone methyltransferase
AK40_1923	PF03606	AK40_1923
AK40_1924	PF10020	AK40_1924
AK40_1928	PF13411	MerR HTH family regulatory protein
AK40_1929	PF11139	AK40_1929
AK40_193	PF07307	AK40_193
AK40_1930	PF12146	Putative lysophospholipase
AK40_1931	PF01381	Helix-turn-helix
AK40_1932	PF01297	Periplasmic solute binding protein family
AK40_1932	PF09223	YodA lipocalin-like domain
AK40_1933	PF00155	Aminotransferase class I and II
AK40_1933	PF00392	Bacterial regulatory proteins, gntR family
AK40_1934	PF01619	Proline dehydrogenase
AK40_1936	PF04073	Aminoacyl-tRNA editing domain
AK40_1937	PF00144	Beta-lactamase
AK40_1938	PF00072	Response regulator receiver domain
AK40_1938	PF00196	Bacterial regulatory proteins, luxR family
AK40_1938	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_1938	PF07730	Histidine kinase
AK40_1939	PF03129	Anticodon binding domain
AK40_1939	PF13393	Histidyl-tRNA synthetase
AK40_194	PF01209	ubiE/COQ5 methyltransferase family
AK40_1942	PF01638	HxlR-like helix-turn-helix
AK40_1943	PF00881	Nitroreductase family
AK40_1944	PF06949	AK40_1944
AK40_1945	PF00224	Pyruvate kinase, barrel domain
AK40_1947	PF13561	Enoyl-(Acyl carrier protein) reductase
AK40_1948	PF16949	AK40_1948
AK40_1949	PF00005	ABC transporter
AK40_195	PF00348	Polyprenyl synthetase
AK40_1951	PF12676	AK40_1951
AK40_1952	PF01381	Helix-turn-helix
AK40_1954	PF13419	Haloacid dehalogenase-like hydrolase
AK40_1955	PF01385	AK40_1955
AK40_1955	PF07282	AK40_1955
AK40_1955	PF12323	AK40_1955
AK40_1956	PF13411	MerR HTH family regulatory protein
AK40_1957	PF07853	AK40_1957
AK40_1958	PF13350	Tyrosine phosphatase family
AK40_1959	PF00583	Acetyltransferase (GNAT) family
AK40_196	PF00334	Nucleoside diphosphate kinase
AK40_1960	PF10978	AK40_1960
AK40_1961	PF00293	NUDIX domain
AK40_1962	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AK40_1963	PF00480	ROK family
AK40_1964	PF07690	Major Facilitator Superfamily
AK40_1965	PF12464	Maltose acetyltransferase
AK40_1965	PF14602	Hexapeptide repeat of succinyl-transferase
AK40_1966	PF02687	AK40_1966
AK40_1966	PF12704	MacB-like periplasmic core domain
AK40_1967	PF00005	ABC transporter
AK40_1969	PF00579	tRNA synthetases class I (W and Y)
AK40_197	PF01264	Chorismate synthase
AK40_1970	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
AK40_1970	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal
AK40_1970	PF13288	DXP reductoisomerase C-terminal domain
AK40_1971	PF01594	AK40_1971
AK40_1972	PF04226	AK40_1972
AK40_1973	PF13673	Acetyltransferase (GNAT) domain
AK40_1975	PF13489	Methyltransferase domain
AK40_1976	PF11706	CGNR zinc finger
AK40_1977	PF07690	Major Facilitator Superfamily
AK40_1978	PF00515	Tetratricopeptide repeat
AK40_1978	PF13181	Tetratricopeptide repeat
AK40_1978	PF13432	Tetratricopeptide repeat
AK40_198	PF01761	3-dehydroquinate synthase
AK40_1980	PF13061	AK40_1980
AK40_1981	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
AK40_1982	PF03899	AK40_1982
AK40_1983	PF00571	CBS domain
AK40_1983	PF01595	AK40_1983
AK40_1983	PF03471	Transporter associated domain
AK40_1984	PF13411	MerR HTH family regulatory protein
AK40_1985	PF00892	EamA-like transporter family
AK40_1986	PF00805	Pentapeptide repeats (8 copies)
AK40_1987	PF06906	AK40_1987
AK40_1988	PF10282	Lactonase, 7-bladed beta-propeller
AK40_1989	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
AK40_1989	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
AK40_199	PF00155	Aminotransferase class I and II
AK40_1990	PF02447	AK40_1990
AK40_1991	PF00923	Transaldolase
AK40_1992	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
AK40_1992	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AK40_1993	PF00456	Transketolase, thiamine diphosphate binding domain
AK40_1993	PF02779	Transketolase, pyrimidine binding domain
AK40_1993	PF02780	Transketolase, C-terminal domain
AK40_1994	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
AK40_1994	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
AK40_1995	PF13602	Zinc-binding dehydrogenase
AK40_1996	PF03928	Domain of unknown function (DUF336)
AK40_1998	PF03222	Tryptophan/tyrosine permease family
AK40_1999	PF13027	AK40_1999
AK40_2	PF13045	AK40_2
AK40_20	PF12867	DinB superfamily
AK40_200	PF13176	Tetratricopeptide repeat
AK40_200	PF13429	Tetratricopeptide repeat
AK40_200	PF14559	Tetratricopeptide repeat
AK40_2000	PF08858	IDEAL domain
AK40_2001	PF02082	Transcriptional regulator
AK40_2003	PF03960	ArsC family
AK40_2004	PF00392	Bacterial regulatory proteins, gntR family
AK40_2004	PF07702	UTRA domain
AK40_2005	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
AK40_2005	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
AK40_2006	PF10604	Polyketide cyclase / dehydrase and lipid transport
AK40_2007	PF13472	GDSL-like Lipase/Acylhydrolase family
AK40_2008	PF00753	Metallo-beta-lactamase superfamily
AK40_201	PF08858	IDEAL domain
AK40_201	PF08864	UPF0302 domain
AK40_2010	PF01636	Phosphotransferase enzyme family
AK40_2012	PF02567	Phenazine biosynthesis-like protein
AK40_2013	PF00583	Acetyltransferase (GNAT) family
AK40_2014	PF00106	short chain dehydrogenase
AK40_2015	PF13302	Acetyltransferase (GNAT) domain
AK40_2016	PF13302	Acetyltransferase (GNAT) domain
AK40_2017	PF00501	AMP-binding enzyme
AK40_2017	PF13193	AMP-binding enzyme C-terminal domain
AK40_2018	PF02525	Flavodoxin-like fold
AK40_2019	PF01638	HxlR-like helix-turn-helix
AK40_202	PF10673	AK40_202
AK40_2021	PF12796	Ankyrin repeats (3 copies)
AK40_2021	PF13606	Ankyrin repeat
AK40_2022	PF12840	Helix-turn-helix domain
AK40_2023	PF00704	Glycosyl hydrolases family 18
AK40_2023	PF01522	Polysaccharide deacetylase
AK40_2023	PF13641	Glycosyltransferase like family 2
AK40_2024	PF12791	AK40_2024
AK40_2025	PF04542	Sigma-70 region 2
AK40_2026	PF02517	CAAX protease self-immunity
AK40_2027	PF00440	Bacterial regulatory proteins, tetR family
AK40_2028	PF13124	AK40_2028
AK40_2029	PF14526	Integron-associated effector binding protein
AK40_203	PF00355	Rieske [2Fe-2S] domain
AK40_2030	PF08279	HTH domain
AK40_2030	PF13280	AK40_2030
AK40_2031	PF05656	AK40_2031
AK40_2033	PF13780	AK40_2033
AK40_2035	PF06013	Proteins of 100 residues with WXG
AK40_2036	PF01061	AK40_2036
AK40_2037	PF00005	ABC transporter
AK40_2038	PF06304	Protein of unknown function (DUF1048)
AK40_2039	PF03551	Transcriptional regulator PadR-like family
AK40_204	PF00033	Cytochrome b(N-terminal)/b6/petB
AK40_2040	PF03063	Prismane/CO dehydrogenase family
AK40_2043	PF00753	Metallo-beta-lactamase superfamily
AK40_2044	PF01183	Glycosyl hydrolases family 25
AK40_2045	PF03819	MazG nucleotide pyrophosphohydrolase domain
AK40_2046	PF12650	AK40_2046
AK40_2049	PF00144	Beta-lactamase
AK40_205	PF00032	Cytochrome b(C-terminal)/b6/petD
AK40_205	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
AK40_2051	PF13738	Pyridine nucleotide-disulphide oxidoreductase
AK40_2053	PF00027	Cyclic nucleotide-binding domain
AK40_2053	PF13545	Crp-like helix-turn-helix domain
AK40_2054	PF04657	AK40_2054
AK40_2055	PF04657	AK40_2055
AK40_2057	PF00753	Metallo-beta-lactamase superfamily
AK40_2058	PF08240	Alcohol dehydrogenase GroES-like domain
AK40_2058	PF13602	Zinc-binding dehydrogenase
AK40_2059	PF00324	Amino acid permease
AK40_206	PF07187	AK40_206
AK40_2060	PF07690	Major Facilitator Superfamily
AK40_2062	PF10779	AK40_2062
AK40_2064	PF13561	Enoyl-(Acyl carrier protein) reductase
AK40_2065	PF02585	GlcNAc-PI de-N-acetylase
AK40_2066	PF08830	Protein of unknown function (DUF1806)
AK40_2067	PF03600	Citrate transporter
AK40_2068	PF01166	TSC-22/dip/bun family
AK40_2069	PF13302	Acetyltransferase (GNAT) domain
AK40_207	PF07314	AK40_207
AK40_2070	PF01497	Periplasmic binding protein
AK40_2071	PF01032	FecCD transport family
AK40_2072	PF01032	FecCD transport family
AK40_2073	PF05675	AK40_2073
AK40_2074	PF02567	Phenazine biosynthesis-like protein
AK40_2075	PF13170	AK40_2075
AK40_2076	PF12867	DinB superfamily
AK40_2077	PF05163	DinB family
AK40_2078	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AK40_2078	PF03466	LysR substrate binding domain
AK40_2079	PF00107	Zinc-binding dehydrogenase
AK40_2079	PF08240	Alcohol dehydrogenase GroES-like domain
AK40_208	PF09577	AK40_208
AK40_2080	PF00300	Histidine phosphatase superfamily (branch 1)
AK40_2081	PF00583	Acetyltransferase (GNAT) family
AK40_2082	PF00488	MutS domain V
AK40_2086	PF00128	Alpha amylase, catalytic domain
AK40_2086	PF09154	Domain of unknown function (DUF1939)
AK40_2087	PF00797	N-acetyltransferase
AK40_2088	PF01432	Peptidase family M3
AK40_2088	PF08439	Oligopeptidase F
AK40_2089	PF00144	Beta-lactamase
AK40_209	PF04298	AK40_209
AK40_2091	PF07690	Major Facilitator Superfamily
AK40_2092	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AK40_2092	PF03466	LysR substrate binding domain
AK40_2093	PF13079	AK40_2093
AK40_2094	PF02698	DUF218 domain
AK40_2095	PF03009	Glycerophosphoryl diester phosphodiesterase family
AK40_2099	PF01494	FAD binding domain
AK40_210	PF03167	Uracil DNA glycosylase superfamily
AK40_2100	PF01022	Bacterial regulatory protein, arsR family
AK40_2101	PF08240	Alcohol dehydrogenase GroES-like domain
AK40_2101	PF13602	Zinc-binding dehydrogenase
AK40_2102	PF02696	AK40_2102
AK40_2103	PF13181	Tetratricopeptide repeat
AK40_2105	PF04299	Putative FMN-binding domain
AK40_2106	PF04229	GrpB protein
AK40_2107	PF14079	AK40_2107
AK40_2108	PF01758	Sodium Bile acid symporter family
AK40_2109	PF01565	FAD binding domain
AK40_2109	PF02913	FAD linked oxidases, C-terminal domain
AK40_211	PF02588	AK40_211
AK40_211	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
AK40_2110	PF11070	AK40_2110
AK40_2111	PF13692	Glycosyl transferases group 1
AK40_2112	PF05050	Methyltransferase FkbM domain
AK40_2113	PF00132	Bacterial transferase hexapeptide (six repeats)
AK40_2114	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
AK40_2115	PF00535	Glycosyl transferase family 2
AK40_2115	PF08241	Methyltransferase domain
AK40_2116	PF00378	Enoyl-CoA hydratase/isomerase family
AK40_2117	PF00801	PKD domain
AK40_2117	PF01752	Collagenase
AK40_2117	PF08453	Peptidase family M9 N-terminal
AK40_2118	PF02308	AK40_2118
AK40_2119	PF13302	Acetyltransferase (GNAT) domain
AK40_212	PF03819	MazG nucleotide pyrophosphohydrolase domain
AK40_2120	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AK40_2121	PF04294	AK40_2121
AK40_2123	PF13037	AK40_2123
AK40_2123	PF13039	AK40_2123
AK40_2125	PF00929	Exonuclease
AK40_2126	PF00313	'Cold-shock' DNA-binding domain
AK40_2128	PF00258	Flavodoxin
AK40_2129	PF01184	AK40_2129
AK40_213	PF01113	Dihydrodipicolinate reductase, N-terminus
AK40_213	PF05173	Dihydrodipicolinate reductase, C-terminus
AK40_2132	PF04266	ASCH domain
AK40_2134	PF00132	Bacterial transferase hexapeptide (six repeats)
AK40_2135	PF01345	AK40_2135
AK40_2136	PF00106	short chain dehydrogenase
AK40_2137	PF00583	Acetyltransferase (GNAT) family
AK40_2138	PF00206	Lyase
AK40_2138	PF14698	Argininosuccinate lyase C-terminal
AK40_2139	PF13354	Beta-lactamase enzyme family
AK40_214	PF02142	MGS-like domain
AK40_2140	PF01156	Inosine-uridine preferring nucleoside hydrolase
AK40_2141	PF00474	Sodium:solute symporter family
AK40_2142	PF06196	AK40_2142
AK40_2143	PF00171	Aldehyde dehydrogenase family
AK40_2144	PF13561	Enoyl-(Acyl carrier protein) reductase
AK40_2145	PF14151	AK40_2145
AK40_2146	PF13243	Prenyltransferase-like
AK40_2146	PF13249	Prenyltransferase-like
AK40_2147	PF02681	AK40_2147
AK40_2148	PF00892	EamA-like transporter family
AK40_2149	PF06961	AK40_2149
AK40_215	PF02585	GlcNAc-PI de-N-acetylase
AK40_2152	PF01883	Domain of unknown function DUF59
AK40_2152	PF10609	ParA/MinD ATPase like
AK40_2153	PF02597	ThiS family
AK40_2154	PF02391	MoaE protein
AK40_2155	PF00994	Probable molybdopterin binding domain
AK40_2155	PF03453	MoeA N-terminal region (domain I and II)
AK40_2155	PF03454	MoeA C-terminal region (domain IV)
AK40_2156	PF00899	ThiF family
AK40_2157	PF01226	Formate/nitrite transporter
AK40_2158	PF04055	Radical SAM superfamily
AK40_2158	PF06463	Molybdenum Cofactor Synthesis C
AK40_2158	PF13353	4Fe-4S single cluster domain
AK40_2159	PF02634	FdhD/NarQ family
AK40_216	PF00534	Glycosyl transferases group 1
AK40_216	PF13439	Glycosyltransferase Family 4
AK40_2160	PF10057	AK40_2160
AK40_2161	PF07849	AK40_2161
AK40_2162	PF00384	Molybdopterin oxidoreductase
AK40_2162	PF01568	Molydopterin dinucleotide binding domain
AK40_2162	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
AK40_2162	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AK40_2162	PF12838	4Fe-4S dicluster domain
AK40_2162	PF13510	2Fe-2S iron-sulfur cluster binding domain
AK40_2164	PF03323	AK40_2164
AK40_2165	PF03845	AK40_2165
AK40_2166	PF05504	Spore germination B3/ GerAC like, C-terminal
AK40_2168	PF13809	AK40_2168
AK40_217	PF01743	Poly A polymerase head domain
AK40_217	PF12627	Probable RNA and SrmB- binding site of polymerase A
AK40_217	PF13735	tRNA nucleotidyltransferase domain 2 putative
AK40_2172	PF13649	Methyltransferase domain
AK40_2173	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AK40_2174	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AK40_2175	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AK40_2176	PF00375	Sodium:dicarboxylate symporter family
AK40_2177	PF03816	Cell envelope-related transcriptional attenuator domain
AK40_2179	PF04542	Sigma-70 region 2
AK40_2179	PF08281	Sigma-70, region 4
AK40_218	PF02237	Biotin protein ligase C terminal domain
AK40_218	PF03099	Biotin/lipoate A/B protein ligase family
AK40_218	PF08279	HTH domain
AK40_2180	PF13273	AK40_2180
AK40_2181	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AK40_2182	PF12679	AK40_2182
AK40_2183	PF00005	ABC transporter
AK40_2184	PF00440	Bacterial regulatory proteins, tetR family
AK40_2185	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
AK40_2185	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
AK40_2187	PF00521	DNA gyrase/topoisomerase IV, subunit A
AK40_2187	PF03989	DNA gyrase C-terminal domain, beta-propeller
AK40_2188	PF00204	DNA gyrase B
AK40_2188	PF00986	DNA gyrase B subunit, carboxyl terminus
AK40_2188	PF01751	Toprim domain
AK40_2188	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_2189	PF13380	CoA binding domain
AK40_219	PF13473	Cupredoxin-like domain
AK40_2190	PF13180	PDZ domain
AK40_2190	PF13365	Trypsin-like peptidase domain
AK40_2191	PF00072	Response regulator receiver domain
AK40_2191	PF00486	Transcriptional regulatory protein, C terminal
AK40_2192	PF04055	Radical SAM superfamily
AK40_2192	PF13353	4Fe-4S single cluster domain
AK40_2193	PF13597	Anaerobic ribonucleoside-triphosphate reductase
AK40_2194	PF02660	AK40_2194
AK40_2195	PF01521	Iron-sulphur cluster biosynthesis
AK40_2196	PF03061	Thioesterase superfamily
AK40_2197	PF00704	Glycosyl hydrolases family 18
AK40_2197	PF01476	LysM domain
AK40_2199	PF08177	AK40_2199
AK40_22	PF00512	His Kinase A (phospho-acceptor) domain
AK40_22	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_22	PF07694	5TMR of 5TMR-LYT
AK40_220	PF02548	Ketopantoate hydroxymethyltransferase
AK40_2200	PF13040	AK40_2200
AK40_2201	PF00929	Exonuclease
AK40_2202	PF00578	AhpC/TSA family
AK40_2204	PF00005	ABC transporter
AK40_2204	PF00664	ABC transporter transmembrane region
AK40_2205	PF00589	Phage integrase family
AK40_2205	PF02899	Phage integrase, N-terminal SAM-like domain
AK40_2206	PF00589	Phage integrase family
AK40_2209	PF00664	ABC transporter transmembrane region
AK40_221	PF02569	Pantoate-beta-alanine ligase
AK40_2210	PF00330	Aconitase family (aconitate hydratase)
AK40_2210	PF00694	Aconitase C-terminal domain
AK40_2211	PF08175	AK40_2211
AK40_2212	PF01522	Polysaccharide deacetylase
AK40_2214	PF08179	AK40_2214
AK40_2218	PF01411	tRNA synthetases class II (A)
AK40_2218	PF02272	DHHA1 domain
AK40_2218	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
AK40_2219	PF00293	NUDIX domain
AK40_222	PF02261	Aspartate decarboxylase
AK40_2221	PF00108	Thiolase, N-terminal domain
AK40_2221	PF02803	Thiolase, C-terminal domain
AK40_2222	PF00501	AMP-binding enzyme
AK40_2222	PF13193	AMP-binding enzyme C-terminal domain
AK40_2223	PF02632	BioY family
AK40_2224	PF00501	AMP-binding enzyme
AK40_2224	PF13193	AMP-binding enzyme C-terminal domain
AK40_2225	PF13346	AK40_2225
AK40_2229	PF05532	CsbD-like
AK40_223	PF00929	Exonuclease
AK40_223	PF04851	Type III restriction enzyme, res subunit
AK40_223	PF13307	Helicase C-terminal domain
AK40_2230	PF00395	S-layer homology domain
AK40_2230	PF16103	AK40_2230
AK40_2231	PF09932	AK40_2231
AK40_2232	PF01510	N-acetylmuramoyl-L-alanine amidase
AK40_2233	PF13672	Protein phosphatase 2C
AK40_2234	PF02588	AK40_2234
AK40_2234	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
AK40_2235	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AK40_2236	PF00512	His Kinase A (phospho-acceptor) domain
AK40_2236	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_2236	PF08448	PAS fold
AK40_2236	PF13426	PAS domain
AK40_2237	PF02230	Phospholipase/Carboxylesterase
AK40_2238	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AK40_2239	PF00474	Sodium:solute symporter family
AK40_224	PF14084	AK40_224
AK40_2240	PF01645	Conserved region in glutamate synthase
AK40_2241	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
AK40_2242	PF02559	CarD-like/TRCF domain
AK40_2243	PF00491	Arginase family
AK40_2244	PF01979	Amidohydrolase family
AK40_2245	PF01175	Urocanase
AK40_2245	PF17391	AK40_2245
AK40_2245	PF17392	AK40_2245
AK40_2246	PF00221	Aromatic amino acid lyase
AK40_2247	PF09021	HutP
AK40_2248	PF08241	Methyltransferase domain
AK40_2249	PF01965	DJ-1/PfpI family
AK40_2250	PF13521	AAA domain
AK40_2252	PF11084	AK40_2252
AK40_2255	PF01345	AK40_2255
AK40_2256	PF07301	AK40_2256
AK40_2257	PF02683	AK40_2257
AK40_2258	PF00892	EamA-like transporter family
AK40_2259	PF01546	Peptidase family M20/M25/M40
AK40_2259	PF07687	Peptidase dimerisation domain
AK40_226	PF00155	Aminotransferase class I and II
AK40_2260	PF12679	AK40_2260
AK40_2261	PF00005	ABC transporter
AK40_2263	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AK40_2263	PF03466	LysR substrate binding domain
AK40_2264	PF03788	AK40_2264
AK40_2265	PF04172	AK40_2265
AK40_2268	PF13043	AK40_2268
AK40_2269	PF01925	AK40_2269
AK40_227	PF07261	Replication initiation and membrane attachment
AK40_2271	PF00395	S-layer homology domain
AK40_2271	PF01510	N-acetylmuramoyl-L-alanine amidase
AK40_2273	PF08378	AK40_2273
AK40_2274	PF00005	ABC transporter
AK40_2274	PF00664	ABC transporter transmembrane region
AK40_2275	PF00005	ABC transporter
AK40_2275	PF00664	ABC transporter transmembrane region
AK40_2276	PF03672	AK40_2276
AK40_2277	PF10747	Protein of unknown function (DUF2522)
AK40_2278	PF00456	Transketolase, thiamine diphosphate binding domain
AK40_2278	PF02779	Transketolase, pyrimidine binding domain
AK40_2278	PF02780	Transketolase, C-terminal domain
AK40_2279	PF00528	Binding-protein-dependent transport system inner membrane component
AK40_228	PF00633	Helix-hairpin-helix motif
AK40_228	PF00730	HhH-GPD superfamily base excision DNA repair protein
AK40_228	PF10576	Iron-sulfur binding domain of endonuclease III
AK40_2280	PF00528	Binding-protein-dependent transport system inner membrane component
AK40_2281	PF00005	ABC transporter
AK40_2282	PF12974	ABC transporter, phosphonate, periplasmic substrate-binding protein
AK40_2283	PF00149	Calcineurin-like phosphoesterase
AK40_2283	PF02872	5'-nucleotidase, C-terminal domain
AK40_2284	PF05979	Bacterial protein of unknown function (DUF896)
AK40_2285	PF00239	Resolvase, N terminal domain
AK40_2286	PF00717	Peptidase S24-like
AK40_2286	PF01726	LexA DNA binding domain
AK40_2287	PF13349	AK40_2287
AK40_2288	PF08006	AK40_2288
AK40_2289	PF03551	Transcriptional regulator PadR-like family
AK40_2290	PF00120	Glutamine synthetase, catalytic domain
AK40_2290	PF03951	Glutamine synthetase, beta-Grasp domain
AK40_2291	PF13411	MerR HTH family regulatory protein
AK40_2292	PF06838	Methionine gamma-lyase
AK40_2293	PF01926	50S ribosome-binding GTPase
AK40_2293	PF13167	AK40_2293
AK40_2293	PF16360	AK40_2293
AK40_2294	PF03458	AK40_2294
AK40_2296	PF00004	ATPase family associated with various cellular activities (AAA)
AK40_2297	PF00589	Phage integrase family
AK40_2297	PF13495	Phage integrase, N-terminal SAM-like domain
AK40_2298	PF01391	Collagen triple helix repeat (20 copies)
AK40_2299	PF17209	AK40_2299
AK40_23	PF06508	Queuosine biosynthesis protein QueC
AK40_230	PF00041	Fibronectin type III domain
AK40_230	PF00905	Penicillin binding protein transpeptidase domain
AK40_230	PF00912	Transglycosylase
AK40_2300	PF01715	IPP transferase
AK40_2302	PF06725	3D domain
AK40_2302	PF08239	Bacterial SH3 domain
AK40_2303	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AK40_2303	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AK40_2304	PF00294	pfkB family carbohydrate kinase
AK40_2305	PF00455	AK40_2305
AK40_2305	PF08220	DeoR-like helix-turn-helix domain
AK40_2306	PF00465	Iron-containing alcohol dehydrogenase
AK40_2307	PF04238	AK40_2307
AK40_231	PF03838	Recombination protein U
AK40_2310	PF00324	Amino acid permease
AK40_2311	PF00704	Glycosyl hydrolases family 18
AK40_2313	PF00149	Calcineurin-like phosphoesterase
AK40_2314	PF01226	Formate/nitrite transporter
AK40_2315	PF00216	Bacterial DNA-binding protein
AK40_2316	PF00122	E1-E2 ATPase
AK40_2316	PF00403	Heavy-metal-associated domain
AK40_2316	PF00702	haloacid dehalogenase-like hydrolase
AK40_2317	PF00403	Heavy-metal-associated domain
AK40_2318	PF02583	Metal-sensitive transcriptional repressor
AK40_232	PF10720	AK40_232
AK40_2320	PF00756	Putative esterase
AK40_2321	PF00005	ABC transporter
AK40_2322	PF01032	FecCD transport family
AK40_2323	PF01032	FecCD transport family
AK40_2324	PF01497	Periplasmic binding protein
AK40_2325	PF03372	Endonuclease/Exonuclease/phosphatase family
AK40_2326	PF02805	Metal binding domain of Ada
AK40_2326	PF12833	Helix-turn-helix domain
AK40_2327	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
AK40_2327	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
AK40_2328	PF00730	HhH-GPD superfamily base excision DNA repair protein
AK40_2328	PF07934	8-oxoguanine DNA glycosylase, N-terminal domain
AK40_2329	PF01546	Peptidase family M20/M25/M40
AK40_2329	PF07687	Peptidase dimerisation domain
AK40_2330	PF02588	AK40_2330
AK40_2332	PF00300	Histidine phosphatase superfamily (branch 1)
AK40_2333	PF12146	Putative lysophospholipase
AK40_2335	PF00563	EAL domain
AK40_2335	PF00990	GGDEF domain
AK40_2335	PF08448	PAS fold
AK40_2336	PF03033	Glycosyltransferase family 28 N-terminal domain
AK40_2336	PF04101	Glycosyltransferase family 28 C-terminal domain
AK40_2338	PF01370	NAD dependent epimerase/dehydratase family
AK40_2339	PF02719	Polysaccharide biosynthesis protein
AK40_2340	PF10720	AK40_2340
AK40_2341	PF08282	haloacid dehalogenase-like hydrolase
AK40_2342	PF00027	Cyclic nucleotide-binding domain
AK40_2342	PF13545	Crp-like helix-turn-helix domain
AK40_2343	PF10787	AK40_2343
AK40_2345	PF00155	Aminotransferase class I and II
AK40_2345	PF00392	Bacterial regulatory proteins, gntR family
AK40_2347	PF00388	Phosphatidylinositol-specific phospholipase C, X domain
AK40_2348	PF00082	Subtilase family
AK40_2348	PF04151	Bacterial pre-peptidase C-terminal domain
AK40_2349	PF01476	LysM domain
AK40_2349	PF07486	Cell Wall Hydrolase
AK40_235	PF08807	Bacterial domain of unknown function (DUF1798)
AK40_2350	PF13450	NAD(P)-binding Rossmann-like domain
AK40_2352	PF00884	Sulfatase
AK40_2353	PF00350	Dynamin family
AK40_2353	PF13181	Tetratricopeptide repeat
AK40_2355	PF02275	Linear amide C-N hydrolases, choloylglycine hydrolase family
AK40_2356	PF01119	DNA mismatch repair protein, C-terminal domain
AK40_2356	PF08676	MutL C terminal dimerisation domain
AK40_2356	PF13589	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_2357	PF00488	MutS domain V
AK40_2357	PF01624	MutS domain I
AK40_2357	PF05188	MutS domain II
AK40_2357	PF05190	MutS family domain IV
AK40_2357	PF05192	MutS domain III
AK40_2358	PF10628	AK40_2358
AK40_2359	PF06133	Protein of unknown function (DUF964)
AK40_236	PF14178	AK40_236
AK40_2360	PF00919	Uncharacterized protein family UPF0004
AK40_2360	PF01938	TRAM domain
AK40_2360	PF04055	Radical SAM superfamily
AK40_2361	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AK40_2361	PF12367	AK40_2361
AK40_2362	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
AK40_2362	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
AK40_2362	PF17147	AK40_2362
AK40_2363	PF01244	Membrane dipeptidase (Peptidase family M19)
AK40_2364	PF04232	Stage V sporulation protein S (SpoVS)
AK40_2365	PF13277	YmdB-like protein
AK40_2366	PF00013	KH domain
AK40_2366	PF01966	HD domain
AK40_2366	PF12072	AK40_2366
AK40_2367	PF00154	recA bacterial DNA recombination protein
AK40_2368	PF00154	recA bacterial DNA recombination protein
AK40_2369	PF00994	Probable molybdopterin binding domain
AK40_2369	PF02464	Competence-damaged protein
AK40_237	PF14179	AK40_237
AK40_2370	PF01066	CDP-alcohol phosphatidyltransferase
AK40_2371	PF13413	Helix-turn-helix domain
AK40_2371	PF13464	AK40_2371
AK40_2372	PF11868	AK40_2372
AK40_2373	PF11588	Protein of unknown function (DUF3243)
AK40_2374	PF13561	Enoyl-(Acyl carrier protein) reductase
AK40_2375	PF00675	Insulinase (Peptidase family M16)
AK40_2375	PF05193	Peptidase M16 inactive domain
AK40_2376	PF05193	Peptidase M16 inactive domain
AK40_2377	PF02653	AK40_2377
AK40_2378	PF02653	AK40_2378
AK40_2379	PF00005	ABC transporter
AK40_238	PF11122	AK40_238
AK40_2380	PF02608	Basic membrane protein
AK40_2381	PF00392	Bacterial regulatory proteins, gntR family
AK40_2381	PF07702	UTRA domain
AK40_2382	PF01580	FtsK/SpoIIIE family
AK40_2382	PF09397	Ftsk gamma domain
AK40_2383	PF14035	AK40_2383
AK40_2384	PF00574	Clp protease
AK40_2385	PF00753	Metallo-beta-lactamase superfamily
AK40_2385	PF07521	RNA-metabolising metallo-beta-lactamase
AK40_2386	PF00701	Dihydrodipicolinate synthetase family
AK40_2387	PF00696	Amino acid kinase family
AK40_2387	PF13840	ACT domain
AK40_2388	PF01118	Semialdehyde dehydrogenase, NAD binding domain
AK40_2388	PF02774	Semialdehyde dehydrogenase, dimerisation domain
AK40_2389	PF02441	Flavoprotein
AK40_239	PF06908	Protein of unknown function (DUF1273)
AK40_2390	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
AK40_2390	PF16924	AK40_2390
AK40_2391	PF05239	PRC-barrel domain
AK40_2392	PF00675	Insulinase (Peptidase family M16)
AK40_2392	PF05193	Peptidase M16 inactive domain
AK40_2393	PF01522	Polysaccharide deacetylase
AK40_2394	PF00013	KH domain
AK40_2394	PF00575	S1 RNA binding domain
AK40_2394	PF01138	3' exoribonuclease family, domain 1
AK40_2394	PF03725	3' exoribonuclease family, domain 2
AK40_2394	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
AK40_2395	PF00312	Ribosomal protein S15
AK40_2396	PF01687	Riboflavin kinase
AK40_2396	PF06574	FAD synthetase
AK40_2397	PF01509	TruB family pseudouridylate synthase (N terminal domain)
AK40_2397	PF16198	AK40_2397
AK40_2398	PF02033	Ribosome-binding factor A
AK40_2399	PF04456	Protein of unknown function (DUF503)
AK40_24	PF01242	6-pyruvoyl tetrahydropterin synthase
AK40_240	PF05103	DivIVA protein
AK40_2400	PF00009	Elongation factor Tu GTP binding domain
AK40_2400	PF04760	Translation initiation factor IF-2, N-terminal region
AK40_2400	PF11987	Translation-initiation factor 2
AK40_2401	PF01248	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
AK40_2402	PF04296	Protein of unknown function (DUF448)
AK40_2403	PF00575	S1 RNA binding domain
AK40_2403	PF08529	NusA N-terminal domain
AK40_2403	PF13184	NusA-like KH domain
AK40_2404	PF02576	Uncharacterised BCR, YhbC family COG0779
AK40_2404	PF17384	AK40_2404
AK40_2405	PF07733	Bacterial DNA polymerase III alpha subunit
AK40_2405	PF14579	Helix-hairpin-helix motif
AK40_2406	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)
AK40_2408	PF00929	Exonuclease
AK40_2408	PF02811	PHP domain
AK40_2408	PF07733	Bacterial DNA polymerase III alpha subunit
AK40_2408	PF11490	AK40_2408
AK40_2408	PF14480	AK40_2408
AK40_2409	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
AK40_2409	PF03129	Anticodon binding domain
AK40_2409	PF04073	Aminoacyl-tRNA editing domain
AK40_241	PF01170	Putative RNA methylase family UPF0020
AK40_241	PF02926	THUMP domain
AK40_2410	PF02163	Peptidase family M50
AK40_2410	PF13180	PDZ domain
AK40_2411	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
AK40_2411	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal
AK40_2411	PF13288	DXP reductoisomerase C-terminal domain
AK40_2412	PF01148	Cytidylyltransferase family
AK40_2413	PF01255	Putative undecaprenyl diphosphate synthase
AK40_2414	PF01765	Ribosome recycling factor
AK40_2415	PF00696	Amino acid kinase family
AK40_2416	PF00889	Elongation factor TS
AK40_2417	PF00318	Ribosomal protein S2
AK40_2418	PF06018	CodY GAF-like domain
AK40_2418	PF08222	CodY helix-turn-helix domain
AK40_2419	PF00004	ATPase family associated with various cellular activities (AAA)
AK40_2419	PF07724	AAA domain (Cdc48 subfamily)
AK40_2419	PF10431	C-terminal, D2-small domain, of ClpB protein
AK40_242	PF13060	AK40_242
AK40_2420	PF00227	Proteasome subunit
AK40_2421	PF00589	Phage integrase family
AK40_2421	PF02899	Phage integrase, N-terminal SAM-like domain
AK40_2422	PF01134	Glucose inhibited division protein A
AK40_2423	PF01131	DNA topoisomerase
AK40_2423	PF01396	AK40_2423
AK40_2423	PF01751	Toprim domain
AK40_2424	PF02481	DNA recombination-mediator protein A
AK40_2425	PF00549	CoA-ligase
AK40_2425	PF02629	CoA binding domain
AK40_2426	PF00549	CoA-ligase
AK40_2426	PF08442	ATP-grasp domain
AK40_2427	PF01351	Ribonuclease HII
AK40_2428	PF01926	50S ribosome-binding GTPase
AK40_2429	PF00717	Peptidase S24-like
AK40_243	PF13307	Helicase C-terminal domain
AK40_2430	PF01245	Ribosomal protein L19
AK40_2431	PF01746	tRNA (Guanine-1)-methyltransferase
AK40_2432	PF01782	RimM N-terminal domain
AK40_2432	PF05239	PRC-barrel domain
AK40_2433	PF13083	KH domain
AK40_2434	PF00886	Ribosomal protein S16
AK40_2435	PF00448	SRP54-type protein, GTPase domain
AK40_2435	PF02881	SRP54-type protein, helical bundle domain
AK40_2435	PF02978	Signal peptide binding domain
AK40_2436	PF04297	Putative helix-turn-helix protein, YlxM / p13 like
AK40_2437	PF00448	SRP54-type protein, GTPase domain
AK40_2437	PF02881	SRP54-type protein, helical bundle domain
AK40_2438	PF02463	RecF/RecN/SMC N terminal domain
AK40_2438	PF06470	SMC proteins Flexible Hinge Domain
AK40_2439	PF00035	Double-stranded RNA binding motif
AK40_2439	PF14622	Ribonuclease-III-like
AK40_244	PF02074	Carboxypeptidase Taq (M32) metallopeptidase
AK40_2440	PF00550	Phosphopantetheine attachment site
AK40_2441	PF13561	Enoyl-(Acyl carrier protein) reductase
AK40_2442	PF00698	Acyl transferase domain
AK40_2443	PF02504	Fatty acid synthesis protein
AK40_2444	PF03061	Thioesterase superfamily
AK40_2445	PF00270	DEAD/DEAH box helicase
AK40_2445	PF00271	Helicase conserved C-terminal domain
AK40_2445	PF17191	AK40_2445
AK40_2446	PF02734	DAK2 domain
AK40_2446	PF13684	Dihydroxyacetone kinase family
AK40_2447	PF03780	AK40_2447
AK40_2448	PF00830	Ribosomal L28 family
AK40_2449	PF04263	Thiamin pyrophosphokinase, catalytic domain
AK40_2449	PF04265	Thiamin pyrophosphokinase, vitamin B1 binding domain
AK40_245	PF00583	Acetyltransferase (GNAT) family
AK40_2450	PF00834	Ribulose-phosphate 3 epimerase family
AK40_2451	PF03193	Protein of unknown function, DUF258
AK40_2451	PF16745	AK40_2451
AK40_2452	PF00069	Protein kinase domain
AK40_2452	PF03793	PASTA domain
AK40_2453	PF13672	Protein phosphatase 2C
AK40_2454	PF04055	Radical SAM superfamily
AK40_2454	PF13394	4Fe-4S single cluster domain
AK40_2455	PF01029	NusB family
AK40_2455	PF01189	NOL1/NOP2/sun family
AK40_2456	PF00551	Formyl transferase
AK40_2456	PF02911	Formyl transferase, C-terminal domain
AK40_2457	PF01327	Polypeptide deformylase
AK40_2458	PF00271	Helicase conserved C-terminal domain
AK40_2458	PF04851	Type III restriction enzyme, res subunit
AK40_2459	PF02441	Flavoprotein
AK40_2459	PF04127	DNA / pantothenate metabolism flavoprotein
AK40_246	PF01636	Phosphotransferase enzyme family
AK40_2460	PF01192	RNA polymerase Rpb6
AK40_2461	PF00625	Guanylate kinase
AK40_2462	PF04025	AK40_2462
AK40_2463	PF03755	AK40_2463
AK40_2463	PF08340	AK40_2463
AK40_2464	PF00122	E1-E2 ATPase
AK40_2464	PF00689	Cation transporting ATPase, C-terminus
AK40_2464	PF00690	Cation transporter/ATPase, N-terminus
AK40_2464	PF00702	haloacid dehalogenase-like hydrolase
AK40_2465	PF05670	AK40_2465
AK40_2465	PF05833	Fibronectin-binding protein A N-terminus (FbpA)
AK40_2466	PF00557	Metallopeptidase family M24
AK40_2466	PF01321	Creatinase/Prolidase N-terminal domain
AK40_2467	PF04978	Protein of unknown function (DUF664)
AK40_2468	PF14037	AK40_2468
AK40_2469	PF14037	AK40_2469
AK40_247	PF00557	Metallopeptidase family M24
AK40_2471	PF10852	AK40_2471
AK40_2472	PF13419	Haloacid dehalogenase-like hydrolase
AK40_2473	PF00156	Phosphoribosyl transferase domain
AK40_2474	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
AK40_2475	PF01180	Dihydroorotate dehydrogenase
AK40_2476	PF00175	Oxidoreductase NAD-binding domain
AK40_2476	PF00970	Oxidoreductase FAD-binding domain
AK40_2476	PF10418	Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
AK40_2477	PF02142	MGS-like domain
AK40_2477	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AK40_2477	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AK40_2478	PF00117	Glutamine amidotransferase class-I
AK40_2478	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
AK40_2479	PF01979	Amidohydrolase family
AK40_248	PF00156	Phosphoribosyl transferase domain
AK40_2480	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
AK40_2480	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
AK40_2481	PF00860	Permease family
AK40_2482	PF00156	Phosphoribosyl transferase domain
AK40_2483	PF00849	RNA pseudouridylate synthase
AK40_2483	PF01479	S4 domain
AK40_2484	PF01252	AK40_2484
AK40_2486	PF00133	tRNA synthetases class I (I, L, M and V)
AK40_2486	PF06827	Zinc finger found in FPG and IleRS
AK40_2486	PF08264	Anticodon-binding domain of tRNA
AK40_2487	PF05103	DivIVA protein
AK40_2488	PF01479	S4 domain
AK40_2489	PF02325	AK40_2489
AK40_249	PF00860	Permease family
AK40_2490	PF04472	Protein of unknown function (DUF552)
AK40_2491	PF01168	Alanine racemase, N-terminal domain
AK40_2492	PF02578	Multi-copper polyphenol oxidoreductase laccase
AK40_2493	PF05239	PRC-barrel domain
AK40_2494	PF04542	Sigma-70 region 2
AK40_2494	PF04545	Sigma-70, region 4
AK40_2495	PF04542	Sigma-70 region 2
AK40_2495	PF04545	Sigma-70, region 4
AK40_2496	PF03419	AK40_2496
AK40_2497	PF00091	Tubulin/FtsZ family, GTPase domain
AK40_2497	PF12327	FtsZ family, C-terminal domain
AK40_2498	PF02491	SHS2 domain inserted in FTSA
AK40_2498	PF11983	AK40_2498
AK40_2498	PF14450	Cell division protein FtsA
AK40_2499	PF03799	Cell division protein FtsQ
AK40_2499	PF08478	POTRA domain, FtsQ-type
AK40_25	PF04055	Radical SAM superfamily
AK40_25	PF13353	4Fe-4S single cluster domain
AK40_250	PF04235	AK40_250
AK40_2500	PF01565	FAD binding domain
AK40_2500	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
AK40_2501	PF03033	Glycosyltransferase family 28 N-terminal domain
AK40_2501	PF04101	Glycosyltransferase family 28 C-terminal domain
AK40_2502	PF01098	AK40_2502
AK40_2503	PF02875	Mur ligase family, glutamate ligase domain
AK40_2503	PF08245	Mur ligase middle domain
AK40_2504	PF00953	Glycosyl transferase family 4
AK40_2504	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1
AK40_2505	PF01225	Mur ligase family, catalytic domain
AK40_2505	PF02875	Mur ligase family, glutamate ligase domain
AK40_2505	PF08245	Mur ligase middle domain
AK40_2506	PF00905	Penicillin binding protein transpeptidase domain
AK40_2506	PF03717	Penicillin-binding Protein dimerisation domain
AK40_2506	PF03793	PASTA domain
AK40_2507	PF00905	Penicillin binding protein transpeptidase domain
AK40_2507	PF03717	Penicillin-binding Protein dimerisation domain
AK40_2507	PF03793	PASTA domain
AK40_2508	PF04977	Septum formation initiator
AK40_2509	PF01795	MraW methylase family
AK40_2510	PF10079	AK40_2510
AK40_2511	PF02558	Ketopantoate reductase PanE/ApbA
AK40_2511	PF08546	Ketopantoate reductase PanE/ApbA C terminal
AK40_2512	PF00583	Acetyltransferase (GNAT) family
AK40_2513	PF13921	Myb-like DNA-binding domain
AK40_2514	PF01783	Ribosomal L32p protein family
AK40_2515	PF02620	AK40_2515
AK40_2516	PF05636	HIGH Nucleotidyl Transferase
AK40_2517	PF05362	Lon protease (S16) C-terminal proteolytic domain
AK40_2517	PF13180	PDZ domain
AK40_2518	PF01734	Patatin-like phospholipase
AK40_2519	PF01467	Cytidylyltransferase
AK40_252	PF00350	Dynamin family
AK40_2521	PF03602	Conserved hypothetical protein 95
AK40_2523	PF09902	AK40_2523
AK40_2524	PF06133	Protein of unknown function (DUF964)
AK40_2525	PF00300	Histidine phosphatase superfamily (branch 1)
AK40_2526	PF14003	AK40_2526
AK40_2527	PF14071	AK40_2527
AK40_2528	PF00188	Cysteine-rich secretory protein family
AK40_2528	PF14504	CAP-associated N-terminal
AK40_2529	PF08868	YugN-like family
AK40_253	PF13082	AK40_253
AK40_2530	PF00795	Carbon-nitrogen hydrolase
AK40_2531	PF09678	AK40_2531
AK40_2532	PF03626	AK40_2532
AK40_2533	PF00510	Cytochrome c oxidase subunit III
AK40_2534	PF00115	Cytochrome C and Quinol oxidase polypeptide I
AK40_2535	PF00034	Cytochrome c
AK40_2535	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
AK40_2535	PF02790	Cytochrome C oxidase subunit II, transmembrane domain
AK40_2536	PF01040	UbiA prenyltransferase family
AK40_2537	PF02628	AK40_2537
AK40_2538	PF00289	Carbamoyl-phosphate synthase L chain, N-terminal domain
AK40_2538	PF00364	Biotin-requiring enzyme
AK40_2538	PF00682	HMGL-like
AK40_2538	PF02436	Conserved carboxylase domain
AK40_2538	PF02785	Biotin carboxylase C-terminal domain
AK40_2538	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AK40_2539	PF01098	AK40_2539
AK40_254	PF00583	Acetyltransferase (GNAT) family
AK40_2540	PF07408	Protein of unknown function (DUF1507)
AK40_2542	PF02562	PhoH-like protein
AK40_2542	PF13638	PIN domain
AK40_2543	PF01243	Pyridoxamine 5'-phosphate oxidase
AK40_2544	PF09963	AK40_2544
AK40_2546	PF14036	AK40_2546
AK40_2547	PF00009	Elongation factor Tu GTP binding domain
AK40_2547	PF00679	Elongation factor G C-terminus
AK40_2547	PF03144	Elongation factor Tu domain 2
AK40_2547	PF14492	Elongation Factor G, domain II
AK40_2548	PF17259	AK40_2548
AK40_2549	PF00459	Inositol monophosphatase family
AK40_255	PF10752	AK40_255
AK40_2551	PF06335	Protein of unknown function (DUF1054)
AK40_2552	PF05256	Uncharacterised protein family (UPF0223)
AK40_2553	PF01276	Orn/Lys/Arg decarboxylase, major domain
AK40_2553	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
AK40_2555	PF13790	AK40_2555
AK40_2556	PF13790	AK40_2556
AK40_2557	PF13790	AK40_2557
AK40_2558	PF11256	AK40_2558
AK40_2559	PF08968	Domain of unknown function (DUF1885)
AK40_256	PF00581	Rhodanese-like domain
AK40_2561	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AK40_2561	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AK40_2562	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
AK40_2562	PF00364	Biotin-requiring enzyme
AK40_2562	PF02817	e3 binding domain
AK40_2563	PF02779	Transketolase, pyrimidine binding domain
AK40_2563	PF02780	Transketolase, C-terminal domain
AK40_2564	PF00676	Dehydrogenase E1 component
AK40_2565	PF09680	AK40_2565
AK40_2566	PF01327	Polypeptide deformylase
AK40_2567	PF08282	haloacid dehalogenase-like hydrolase
AK40_2568	PF07288	Protein of unknown function (DUF1447)
AK40_2569	PF00753	Metallo-beta-lactamase superfamily
AK40_2569	PF07521	RNA-metabolising metallo-beta-lactamase
AK40_257	PF01385	AK40_257
AK40_2570	PF02080	TrkA-C domain
AK40_2570	PF02254	TrkA-N domain
AK40_2572	PF01546	Peptidase family M20/M25/M40
AK40_2572	PF07687	Peptidase dimerisation domain
AK40_2573	PF00132	Bacterial transferase hexapeptide (six repeats)
AK40_2573	PF08503	Tetrahydrodipicolinate succinyltransferase N-terminal
AK40_2573	PF14602	Hexapeptide repeat of succinyl-transferase
AK40_2574	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AK40_2574	PF03466	LysR substrate binding domain
AK40_2575	PF00571	CBS domain
AK40_2576	PF14156	Antirepressor AbbA
AK40_2577	PF04308	AK40_2577
AK40_2579	PF08796	Protein of unknown function (DUF1797)
AK40_2580	PF00462	Glutaredoxin
AK40_2581	PF13158	AK40_2581
AK40_2582	PF00563	EAL domain
AK40_2582	PF10388	EAL-domain associated signalling protein domain
AK40_2583	PF13561	Enoyl-(Acyl carrier protein) reductase
AK40_2584	PF00149	Calcineurin-like phosphoesterase
AK40_2586	PF02503	Polyphosphate kinase middle domain
AK40_2586	PF13089	Polyphosphate kinase N-terminal domain
AK40_2586	PF13090	Polyphosphate kinase C-terminal domain
AK40_2587	PF02541	Ppx/GppA phosphatase family
AK40_2588	PF14177	AK40_2588
AK40_2589	PF10368	Putative cell-wall binding lipoprotein
AK40_2590	PF00990	GGDEF domain
AK40_2591	PF04688	AK40_2591
AK40_2593	PF07690	Major Facilitator Superfamily
AK40_2594	PF03551	Transcriptional regulator PadR-like family
AK40_2595	PF01717	Cobalamin-independent synthase, Catalytic domain
AK40_2595	PF08267	Cobalamin-independent synthase, N-terminal domain
AK40_2596	PF11033	Competence protein J (ComJ)
AK40_2597	PF14040	AK40_2597
AK40_2598	PF13152	AK40_2598
AK40_2599	PF00512	His Kinase A (phospho-acceptor) domain
AK40_2599	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_26	PF14489	QueF-like protein
AK40_260	PF03738	Glutathionylspermidine synthase preATP-grasp
AK40_2601	PF00155	Aminotransferase class I and II
AK40_2602	PF00356	Bacterial regulatory proteins, lacI family
AK40_2602	PF13377	Periplasmic binding protein-like domain
AK40_2603	PF00528	Binding-protein-dependent transport system inner membrane component
AK40_2604	PF00528	Binding-protein-dependent transport system inner membrane component
AK40_2605	PF13416	Bacterial extracellular solute-binding protein
AK40_2606	PF00128	Alpha amylase, catalytic domain
AK40_2606	PF02903	Alpha amylase, N-terminal ig-like domain
AK40_2606	PF16657	AK40_2606
AK40_2607	PF00128	Alpha amylase, catalytic domain
AK40_2607	PF16657	AK40_2607
AK40_2608	PF00005	ABC transporter
AK40_2608	PF08402	TOBE domain
AK40_2609	PF00106	short chain dehydrogenase
AK40_261	PF03994	AK40_261
AK40_2611	PF06271	AK40_2611
AK40_2612	PF13162	AK40_2612
AK40_2614	PF13803	AK40_2614
AK40_2616	PF13304	AAA domain
AK40_2616	PF13476	AAA domain
AK40_2617	PF00108	Thiolase, N-terminal domain
AK40_2617	PF02803	Thiolase, C-terminal domain
AK40_2618	PF00293	NUDIX domain
AK40_2619	PF13065	AK40_2619
AK40_262	PF00122	E1-E2 ATPase
AK40_262	PF00690	Cation transporter/ATPase, N-terminus
AK40_2621	PF06570	AK40_2621
AK40_2623	PF03551	Transcriptional regulator PadR-like family
AK40_2624	PF13561	Enoyl-(Acyl carrier protein) reductase
AK40_2625	PF12841	AK40_2625
AK40_2626	PF01008	Initiation factor 2 subunit family
AK40_2627	PF01636	Phosphotransferase enzyme family
AK40_2628	PF00795	Carbon-nitrogen hydrolase
AK40_2629	PF00155	Aminotransferase class I and II
AK40_263	PF01367	5'-3' exonuclease, C-terminal SAM fold
AK40_263	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
AK40_2630	PF00016	Ribulose bisphosphate carboxylase large chain, catalytic domain
AK40_2630	PF02788	Ribulose bisphosphate carboxylase large chain, N-terminal domain
AK40_2631	PF12710	haloacid dehalogenase-like hydrolase
AK40_2632	PF00596	Class II Aldolase and Adducin N-terminal domain
AK40_2633	PF03079	ARD/ARD' family
AK40_2635	PF13077	AK40_2635
AK40_2636	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AK40_2636	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
AK40_2637	PF00990	GGDEF domain
AK40_2638	PF00881	Nitroreductase family
AK40_264	PF13040	AK40_264
AK40_2640	PF13054	AK40_2640
AK40_2641	PF00391	PEP-utilising enzyme, mobile domain
AK40_2641	PF02896	PEP-utilising enzyme, TIM barrel domain
AK40_2641	PF05524	PEP-utilising enzyme, N-terminal
AK40_2642	PF00381	PTS HPr component phosphorylation site
AK40_2643	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
AK40_2643	PF00367	phosphotransferase system, EIIB
AK40_2643	PF02378	Phosphotransferase system, EIIC
AK40_2644	PF00874	PRD domain
AK40_2644	PF03123	CAT RNA binding domain
AK40_2645	PF08282	haloacid dehalogenase-like hydrolase
AK40_2646	PF00392	Bacterial regulatory proteins, gntR family
AK40_2646	PF07702	UTRA domain
AK40_2647	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
AK40_2648	PF01979	Amidohydrolase family
AK40_2649	PF00753	Metallo-beta-lactamase superfamily
AK40_265	PF01345	AK40_265
AK40_2650	PF04079	Putative transcriptional regulators (Ypuh-like)
AK40_2651	PF02616	ScpA/B protein
AK40_2652	PF09680	AK40_2652
AK40_2653	PF03745	Domain of unknown function (DUF309)
AK40_2654	PF00583	Acetyltransferase (GNAT) family
AK40_2655	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
AK40_2656	PF06207	AK40_2656
AK40_2657	PF08282	haloacid dehalogenase-like hydrolase
AK40_2658	PF03323	AK40_2658
AK40_2659	PF14097	AK40_2659
AK40_266	PF13673	Acetyltransferase (GNAT) domain
AK40_2660	PF03862	AK40_2660
AK40_2661	PF07451	Stage V sporulation protein AD (SpoVAD)
AK40_2662	PF03862	AK40_2662
AK40_2663	PF13782	AK40_2663
AK40_2664	PF12164	Stage V sporulation protein AA
AK40_2665	PF16951	AK40_2665
AK40_2666	PF00209	Sodium:neurotransmitter symporter family
AK40_2667	PF04539	Sigma-70 region 3
AK40_2667	PF04542	Sigma-70 region 2
AK40_2667	PF04545	Sigma-70, region 4
AK40_2668	PF13581	Histidine kinase-like ATPase domain
AK40_2669	PF01740	STAS domain
AK40_267	PF00857	Isochorismatase family
AK40_2670	PF00768	D-alanyl-D-alanine carboxypeptidase
AK40_2670	PF07943	Penicillin-binding protein 5, C-terminal domain
AK40_2671	PF00392	Bacterial regulatory proteins, gntR family
AK40_2672	PF00005	ABC transporter
AK40_2673	PF13346	AK40_2673
AK40_2675	PF01047	MarR family
AK40_2676	PF04402	Protein of unknown function (DUF541)
AK40_2677	PF00860	Permease family
AK40_2678	PF01544	CorA-like Mg2+ transporter protein
AK40_2679	PF00591	Glycosyl transferase family, a/b domain
AK40_2679	PF02885	Glycosyl transferase family, helical bundle domain
AK40_2679	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
AK40_2680	PF01048	Phosphorylase superfamily
AK40_2681	PF01676	Metalloenzyme superfamily
AK40_2682	PF13115	AK40_2682
AK40_2683	PF00589	Phage integrase family
AK40_2683	PF02899	Phage integrase, N-terminal SAM-like domain
AK40_2684	PF14004	AK40_2684
AK40_2685	PF01475	Ferric uptake regulator family
AK40_2686	PF01944	AK40_2686
AK40_2687	PF13302	Acetyltransferase (GNAT) domain
AK40_2688	PF00293	NUDIX domain
AK40_2689	PF13072	AK40_2689
AK40_269	PF00892	EamA-like transporter family
AK40_2690	PF00248	Aldo/keto reductase family
AK40_2691	PF00248	Aldo/keto reductase family
AK40_2692	PF04229	GrpB protein
AK40_2693	PF13025	AK40_2693
AK40_2694	PF00149	Calcineurin-like phosphoesterase
AK40_2694	PF02872	5'-nucleotidase, C-terminal domain
AK40_2695	PF12651	AK40_2695
AK40_2696	PF00561	alpha/beta hydrolase fold
AK40_2697	PF03553	AK40_2697
AK40_2697	PF13726	AK40_2697
AK40_2698	PF00356	Bacterial regulatory proteins, lacI family
AK40_2698	PF13377	Periplasmic binding protein-like domain
AK40_2699	PF00583	Acetyltransferase (GNAT) family
AK40_27	PF09953	AK40_27
AK40_270	PF13456	Reverse transcriptase-like
AK40_2700	PF02129	X-Pro dipeptidyl-peptidase (S15 family)
AK40_2701	PF10827	AK40_2701
AK40_2702	PF09360	Iron-binding zinc finger CDGSH type
AK40_2703	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
AK40_2703	PF01872	RibD C-terminal domain
AK40_2704	PF00677	Lumazine binding domain
AK40_2705	PF00925	GTP cyclohydrolase II
AK40_2705	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
AK40_2706	PF00885	6,7-dimethyl-8-ribityllumazine synthase
AK40_2708	PF04055	Radical SAM superfamily
AK40_2708	PF06968	Biotin and Thiamin Synthesis associated domain
AK40_2709	PF13847	Methyltransferase domain
AK40_271	PF01263	Aldose 1-epimerase
AK40_2710	PF12697	Alpha/beta hydrolase family
AK40_2711	PF00155	Aminotransferase class I and II
AK40_2712	PF13500	AAA domain
AK40_2713	PF00202	Aminotransferase class-III
AK40_2715	PF03553	AK40_2715
AK40_2716	PF00149	Calcineurin-like phosphoesterase
AK40_2716	PF00746	AK40_2716
AK40_2716	PF02872	5'-nucleotidase, C-terminal domain
AK40_2717	PF13472	GDSL-like Lipase/Acylhydrolase family
AK40_2718	PF01047	MarR family
AK40_272	PF06177	AK40_272
AK40_2720	PF09835	AK40_2720
AK40_2721	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
AK40_2721	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
AK40_2722	PF00202	Aminotransferase class-III
AK40_2723	PF00696	Amino acid kinase family
AK40_2724	PF01960	ArgJ family
AK40_2725	PF01118	Semialdehyde dehydrogenase, NAD binding domain
AK40_2725	PF02774	Semialdehyde dehydrogenase, dimerisation domain
AK40_2726	PF14164	AK40_2726
AK40_2727	PF00106	short chain dehydrogenase
AK40_2728	PF00753	Metallo-beta-lactamase superfamily
AK40_2729	PF03807	NADP oxidoreductase coenzyme F420-dependent
AK40_2729	PF14748	Pyrroline-5-carboxylate reductase dimerisation
AK40_273	PF13456	Reverse transcriptase-like
AK40_2730	PF03313	AK40_2730
AK40_2731	PF01842	ACT domain
AK40_2731	PF03315	Serine dehydratase beta chain
AK40_2732	PF00753	Metallo-beta-lactamase superfamily
AK40_2732	PF12706	Beta-lactamase superfamily domain
AK40_2733	PF13068	AK40_2733
AK40_2734	PF00817	impB/mucB/samB family
AK40_2734	PF11798	IMS family HHH motif
AK40_2734	PF11799	impB/mucB/samB family C-terminal domain
AK40_2736	PF01546	Peptidase family M20/M25/M40
AK40_2736	PF07687	Peptidase dimerisation domain
AK40_2737	PF13302	Acetyltransferase (GNAT) domain
AK40_2738	PF13033	AK40_2738
AK40_2739	PF03734	L,D-transpeptidase catalytic domain
AK40_274	PF10782	AK40_274
AK40_2740	PF06081	AK40_2740
AK40_2740	PF11728	DUF939 C-terminal domain
AK40_2741	PF00005	ABC transporter
AK40_2742	PF00528	Binding-protein-dependent transport system inner membrane component
AK40_2743	PF00497	Bacterial extracellular solute-binding proteins, family 3
AK40_2744	PF06491	Disulphide isomerase
AK40_2745	PF11208	AK40_2745
AK40_2746	PF00293	NUDIX domain
AK40_2747	PF01098	AK40_2747
AK40_2748	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
AK40_2748	PF00364	Biotin-requiring enzyme
AK40_2748	PF02817	e3 binding domain
AK40_2749	PF02779	Transketolase, pyrimidine binding domain
AK40_2749	PF02780	Transketolase, C-terminal domain
AK40_275	PF10819	AK40_275
AK40_2750	PF00676	Dehydrogenase E1 component
AK40_2751	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AK40_2751	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AK40_2752	PF00871	Acetokinase family
AK40_2753	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AK40_2753	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
AK40_2754	PF01515	Phosphate acetyl/butaryl transferase
AK40_2755	PF00158	Sigma-54 interaction domain
AK40_2755	PF00989	PAS fold
AK40_2755	PF02954	Bacterial regulatory protein, Fis family
AK40_2756	PF11118	AK40_2756
AK40_2757	PF03009	Glycerophosphoryl diester phosphodiesterase family
AK40_2758	PF14174	AK40_2758
AK40_2759	PF13231	AK40_2759
AK40_276	PF00313	'Cold-shock' DNA-binding domain
AK40_2760	PF00072	Response regulator receiver domain
AK40_2760	PF08769	Sporulation initiation factor Spo0A C terminal
AK40_2761	PF05580	AK40_2761
AK40_2761	PF13180	PDZ domain
AK40_2762	PF02463	RecF/RecN/SMC N terminal domain
AK40_2763	PF01316	Arginine repressor, DNA binding domain
AK40_2763	PF02863	Arginine repressor, C-terminal domain
AK40_2764	PF01479	S4 domain
AK40_2764	PF01728	FtsJ-like methyltransferase
AK40_2765	PF02779	Transketolase, pyrimidine binding domain
AK40_2765	PF02780	Transketolase, C-terminal domain
AK40_2765	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
AK40_2766	PF00348	Polyprenyl synthetase
AK40_2767	PF02609	Exonuclease VII small subunit
AK40_2768	PF02601	AK40_2768
AK40_2768	PF13742	AK40_2768
AK40_2769	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
AK40_2769	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
AK40_277	PF08892	AK40_277
AK40_2770	PF01029	NusB family
AK40_2771	PF03780	AK40_2771
AK40_2772	PF00289	Carbamoyl-phosphate synthase L chain, N-terminal domain
AK40_2772	PF02785	Biotin carboxylase C-terminal domain
AK40_2772	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AK40_2773	PF00364	Biotin-requiring enzyme
AK40_2775	PF12685	SpoIIIAH-like protein
AK40_2777	PF09581	AK40_2777
AK40_2778	PF09546	AK40_2778
AK40_2779	PF06686	AK40_2779
AK40_278	PF01810	AK40_278
AK40_2780	PF06686	AK40_2780
AK40_2781	PF09548	AK40_2781
AK40_2782	PF00004	ATPase family associated with various cellular activities (AAA)
AK40_2783	PF10942	AK40_2783
AK40_2784	PF13302	Acetyltransferase (GNAT) domain
AK40_2786	PF01132	Elongation factor P (EF-P) OB domain
AK40_2786	PF08207	Elongation factor P (EF-P) KOW-like domain
AK40_2786	PF09285	Elongation factor P, C-terminal
AK40_2787	PF00557	Metallopeptidase family M24
AK40_2787	PF01321	Creatinase/Prolidase N-terminal domain
AK40_2788	PF01220	Dehydroquinase class II
AK40_2789	PF11085	AK40_2789
AK40_2790	PF07136	AK40_2790
AK40_2791	PF13419	Haloacid dehalogenase-like hydrolase
AK40_2793	PF01325	Iron dependent repressor, N-terminal DNA binding domain
AK40_2793	PF02742	Iron dependent repressor, metal binding and dimerisation domain
AK40_2795	PF03551	Transcriptional regulator PadR-like family
AK40_2796	PF06570	AK40_2796
AK40_2798	PF03099	Biotin/lipoate A/B protein ligase family
AK40_2799	PF00581	Rhodanese-like domain
AK40_280	PF04116	AK40_280
AK40_2800	PF00356	Bacterial regulatory proteins, lacI family
AK40_2800	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
AK40_2801	PF00440	Bacterial regulatory proteins, tetR family
AK40_2802	PF00893	Small Multidrug Resistance protein
AK40_2803	PF00893	Small Multidrug Resistance protein
AK40_2804	PF13126	AK40_2804
AK40_2806	PF13346	AK40_2806
AK40_2807	PF13346	AK40_2807
AK40_2808	PF13346	AK40_2808
AK40_2809	PF13346	AK40_2809
AK40_281	PF04341	AK40_281
AK40_2810	PF00005	ABC transporter
AK40_2811	PF00392	Bacterial regulatory proteins, gntR family
AK40_2813	PF13066	AK40_2813
AK40_2814	PF02347	Glycine cleavage system P-protein
AK40_2815	PF02347	Glycine cleavage system P-protein
AK40_2816	PF01571	Aminomethyltransferase folate-binding domain
AK40_2816	PF08669	Glycine cleavage T-protein C-terminal barrel domain
AK40_2817	PF00176	SNF2 family N-terminal domain
AK40_2817	PF00271	Helicase conserved C-terminal domain
AK40_2818	PF11079	AK40_2818
AK40_2819	PF16723	AK40_2819
AK40_282	PF00474	Sodium:solute symporter family
AK40_2824	PF14038	AK40_2824
AK40_2825	PF01202	Shikimate kinase
AK40_2826	PF13640	2OG-Fe(II) oxygenase superfamily
AK40_2827	PF14173	AK40_2827
AK40_2828	PF07963	Prokaryotic N-terminal methylation motif
AK40_2828	PF15980	AK40_2828
AK40_283	PF00202	Aminotransferase class-III
AK40_2830	PF07963	Prokaryotic N-terminal methylation motif
AK40_2831	PF07963	Prokaryotic N-terminal methylation motif
AK40_2832	PF00482	Type II secretion system (T2SS), protein F
AK40_2833	PF00437	Type II/IV secretion system protein
AK40_2834	PF12840	Helix-turn-helix domain
AK40_2835	PF11117	AK40_2835
AK40_2836	PF00375	Sodium:dicarboxylate symporter family
AK40_2837	PF13051	AK40_2837
AK40_284	PF13143	AK40_284
AK40_2840	PF05014	Nucleoside 2-deoxyribosyltransferase
AK40_2841	PF13110	AK40_2841
AK40_2842	PF03033	Glycosyltransferase family 28 N-terminal domain
AK40_2842	PF04101	Glycosyltransferase family 28 C-terminal domain
AK40_2843	PF00809	Pterin binding enzyme
AK40_2843	PF02310	B12 binding domain
AK40_2843	PF02574	Homocysteine S-methyltransferase
AK40_2843	PF02607	B12 binding domain
AK40_2843	PF02965	Vitamin B12 dependent methionine synthase, activation domain
AK40_2844	PF02219	Methylenetetrahydrofolate reductase
AK40_2844	PF02574	Homocysteine S-methyltransferase
AK40_2845	PF01053	Cys/Met metabolism PLP-dependent enzyme
AK40_2846	PF01053	Cys/Met metabolism PLP-dependent enzyme
AK40_2847	PF12840	Helix-turn-helix domain
AK40_2848	PF02636	Putative S-adenosyl-L-methionine-dependent methyltransferase
AK40_2849	PF00753	Metallo-beta-lactamase superfamily
AK40_2850	PF10958	AK40_2850
AK40_2851	PF00480	ROK family
AK40_2852	PF06014	Bacterial protein of unknown function (DUF910)
AK40_2853	PF01812	5-formyltetrahydrofolate cyclo-ligase family
AK40_2854	PF00471	Ribosomal protein L33
AK40_2855	PF00132	Bacterial transferase hexapeptide (six repeats)
AK40_2855	PF00483	Nucleotidyl transferase
AK40_2855	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
AK40_2856	PF01895	PhoU domain
AK40_2857	PF00005	ABC transporter
AK40_2858	PF00528	Binding-protein-dependent transport system inner membrane component
AK40_2859	PF00528	Binding-protein-dependent transport system inner membrane component
AK40_2860	PF12849	PBP superfamily domain
AK40_2861	PF00905	Penicillin binding protein transpeptidase domain
AK40_2861	PF03717	Penicillin-binding Protein dimerisation domain
AK40_2862	PF07690	Major Facilitator Superfamily
AK40_2863	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
AK40_2863	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
AK40_2865	PF06691	AK40_2865
AK40_2867	PF04551	GcpE protein
AK40_2868	PF01475	Ferric uptake regulator family
AK40_2869	PF00950	AK40_2869
AK40_287	PF00589	Phage integrase family
AK40_2870	PF00005	ABC transporter
AK40_2871	PF02588	AK40_2871
AK40_2871	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
AK40_2872	PF11116	AK40_2872
AK40_2873	PF01261	Xylose isomerase-like TIM barrel
AK40_2874	PF00270	DEAD/DEAH box helicase
AK40_2874	PF00271	Helicase conserved C-terminal domain
AK40_2875	PF14181	AK40_2875
AK40_2876	PF02401	LytB protein
AK40_2877	PF01784	NIF3 (NGG1p interacting factor 3)
AK40_2878	PF04816	Family of unknown function (DUF633)
AK40_2879	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
AK40_288	PF00589	Phage integrase family
AK40_288	PF02899	Phage integrase, N-terminal SAM-like domain
AK40_2880	PF00140	Sigma-70 factor, region 1
AK40_2880	PF03979	Sigma-70 factor, region 1
AK40_2880	PF04539	Sigma-70 region 3
AK40_2880	PF04542	Sigma-70 region 2
AK40_2880	PF04545	Sigma-70, region 4
AK40_2881	PF01807	CHC2 zinc finger
AK40_2881	PF08275	DNA primase catalytic core, N-terminal domain
AK40_2881	PF10410	DnaB-helicase binding domain of primase
AK40_2881	PF13155	Toprim-like
AK40_2882	PF03618	AK40_2882
AK40_2883	PF00571	CBS domain
AK40_2883	PF08279	HTH domain
AK40_2884	PF02565	Recombination protein O C terminal
AK40_2884	PF11967	Recombination protein O N terminal
AK40_2885	PF14006	AK40_2885
AK40_2886	PF01926	50S ribosome-binding GTPase
AK40_2886	PF07650	KH domain
AK40_2887	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
AK40_2888	PF01219	Prokaryotic diacylglycerol kinase
AK40_2889	PF02130	Uncharacterized protein family UPF0054
AK40_289	PF00999	Sodium/hydrogen exchanger family
AK40_2890	PF01966	HD domain
AK40_2890	PF07697	AK40_2890
AK40_2890	PF07698	AK40_2890
AK40_2891	PF02562	PhoH-like protein
AK40_2892	PF06898	AK40_2892
AK40_2893	PF07873	YabP family
AK40_2894	PF09424	Yqey-like protein
AK40_2895	PF01165	Ribosomal protein S21
AK40_2896	PF00919	Uncharacterized protein family UPF0004
AK40_2896	PF01938	TRAM domain
AK40_2896	PF04055	Radical SAM superfamily
AK40_2897	PF04452	RNA methyltransferase
AK40_2898	PF06325	Ribosomal protein L11 methyltransferase (PrmA)
AK40_2899	PF00226	DnaJ domain
AK40_2899	PF00684	DnaJ central domain
AK40_2899	PF01556	DnaJ C terminal domain
AK40_290	PF00753	Metallo-beta-lactamase superfamily
AK40_290	PF07521	RNA-metabolising metallo-beta-lactamase
AK40_2900	PF00012	Hsp70 protein
AK40_2901	PF01025	GrpE
AK40_2902	PF01628	HrcA protein C terminal domain
AK40_2903	PF04055	Radical SAM superfamily
AK40_2903	PF06969	HemN C-terminal domain
AK40_2904	PF01638	HxlR-like helix-turn-helix
AK40_2905	PF00009	Elongation factor Tu GTP binding domain
AK40_2905	PF00679	Elongation factor G C-terminus
AK40_2905	PF03144	Elongation factor Tu domain 2
AK40_2905	PF06421	GTP-binding protein LepA C-terminus
AK40_2906	PF12438	AK40_2906
AK40_2907	PF03418	Germination protease
AK40_2908	PF01649	Ribosomal protein S20
AK40_2909	PF06144	DNA polymerase III, delta subunit
AK40_291	PF06445	GyrI-like small molecule binding domain
AK40_291	PF13411	MerR HTH family regulatory protein
AK40_2910	PF14141	AK40_2910
AK40_2911	PF00753	Metallo-beta-lactamase superfamily
AK40_2911	PF03772	AK40_2911
AK40_2911	PF13567	AK40_2911
AK40_2912	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
AK40_2913	PF10531	SLBB domain
AK40_2913	PF12836	Helix-hairpin-helix motif
AK40_2914	PF03807	NADP oxidoreductase coenzyme F420-dependent
AK40_2914	PF14748	Pyrroline-5-carboxylate reductase dimerisation
AK40_2915	PF13649	Methyltransferase domain
AK40_2916	PF02410	Oligomerisation domain
AK40_2917	PF01966	HD domain
AK40_2918	PF01467	Cytidylyltransferase
AK40_2919	PF01985	CRS1 / YhbY (CRM) domain
AK40_292	PF01554	MatE
AK40_2920	PF01488	Shikimate / quinate 5-dehydrogenase
AK40_2920	PF08501	Shikimate dehydrogenase substrate binding domain
AK40_2921	PF01926	50S ribosome-binding GTPase
AK40_2922	PF09419	AK40_2922
AK40_2923	PF08970	Sporulation inhibitor A
AK40_2924	PF02666	AK40_2924
AK40_2925	PF04542	Sigma-70 region 2
AK40_2925	PF04545	Sigma-70, region 4
AK40_2927	PF16244	AK40_2927
AK40_2928	PF00471	Ribosomal protein L33
AK40_2929	PF00881	Nitroreductase family
AK40_293	PF04239	Protein of unknown function (DUF421)
AK40_2930	PF04607	Region found in RelA / SpoT proteins
AK40_2932	PF00245	Alkaline phosphatase
AK40_2933	PF13673	Acetyltransferase (GNAT) domain
AK40_2934	PF00561	alpha/beta hydrolase fold
AK40_2935	PF07681	AK40_2935
AK40_2937	PF00300	Histidine phosphatase superfamily (branch 1)
AK40_2938	PF13215	AK40_2938
AK40_2939	PF08662	Eukaryotic translation initiation factor eIF2A
AK40_294	PF02698	DUF218 domain
AK40_2940	PF00082	Subtilase family
AK40_2940	PF02225	PA domain
AK40_2940	PF05922	Peptidase inhibitor I9
AK40_2940	PF13860	FlgD Ig-like domain
AK40_2941	PF00351	Biopterin-dependent aromatic amino acid hydroxylase
AK40_2942	PF01329	Pterin 4 alpha carbinolamine dehydratase
AK40_2943	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AK40_2944	PF07681	AK40_2944
AK40_2945	PF07883	Cupin domain
AK40_2945	PF12844	Helix-turn-helix domain
AK40_2946	PF01575	MaoC like domain
AK40_2947	PF13508	Acetyltransferase (GNAT) domain
AK40_2948	PF13302	Acetyltransferase (GNAT) domain
AK40_295	PF09685	AK40_295
AK40_2950	PF00005	ABC transporter
AK40_2951	PF01032	FecCD transport family
AK40_2952	PF01497	Periplasmic binding protein
AK40_2953	PF14143	AK40_2953
AK40_2954	PF00171	Aldehyde dehydrogenase family
AK40_2954	PF00465	Iron-containing alcohol dehydrogenase
AK40_2955	PF01053	Cys/Met metabolism PLP-dependent enzyme
AK40_2956	PF00291	Pyridoxal-phosphate dependent enzyme
AK40_2957	PF01048	Phosphorylase superfamily
AK40_2958	PF08241	Methyltransferase domain
AK40_2959	PF10750	AK40_2959
AK40_296	PF00881	Nitroreductase family
AK40_2960	PF07423	AK40_2960
AK40_2961	PF00905	Penicillin binding protein transpeptidase domain
AK40_2962	PF01272	Transcription elongation factor, GreA/GreB, C-term
AK40_2962	PF03449	Transcription elongation factor, N-terminal
AK40_2963	PF00485	Phosphoribulokinase / Uridine kinase family
AK40_2964	PF01136	AK40_2964
AK40_2964	PF16325	AK40_2964
AK40_2965	PF01136	AK40_2965
AK40_2966	PF01596	O-methyltransferase
AK40_2967	PF02618	YceG-like family
AK40_2968	PF06949	AK40_2968
AK40_2969	PF03652	Uncharacterised protein family (UPF0081)
AK40_297	PF01965	DJ-1/PfpI family
AK40_2970	PF06135	AK40_2970
AK40_2971	PF01411	tRNA synthetases class II (A)
AK40_2971	PF02272	DHHA1 domain
AK40_2971	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
AK40_2972	PF14470	Bacterial PH domain
AK40_2973	PF01594	AK40_2973
AK40_2975	PF13056	AK40_2975
AK40_2977	PF13538	UvrD-like helicase C-terminal domain
AK40_2977	PF13604	AAA domain
AK40_2977	PF14490	Helix-hairpin-helix containing domain
AK40_2978	PF00515	Tetratricopeptide repeat
AK40_2978	PF07719	Tetratricopeptide repeat
AK40_2978	PF13176	Tetratricopeptide repeat
AK40_2978	PF13181	Tetratricopeptide repeat
AK40_2978	PF13414	TPR repeat
AK40_2979	PF03054	tRNA methyl transferase
AK40_298	PF01925	AK40_298
AK40_2980	PF00266	Aminotransferase class-V
AK40_2981	PF02082	Transcriptional regulator
AK40_2982	PF00004	ATPase family associated with various cellular activities (AAA)
AK40_2982	PF12002	MgsA AAA+ ATPase C terminal
AK40_2982	PF16193	AK40_2982
AK40_2983	PF13921	Myb-like DNA-binding domain
AK40_2984	PF00899	ThiF family
AK40_2985	PF00152	tRNA synthetases class II (D, K and N)
AK40_2985	PF01336	OB-fold nucleic acid binding domain
AK40_2985	PF02938	GAD domain
AK40_2986	PF03129	Anticodon binding domain
AK40_2986	PF13393	Histidyl-tRNA synthetase
AK40_2988	PF02580	D-Tyr-tRNA(Tyr) deacylase
AK40_2989	PF02824	TGS domain
AK40_2989	PF04607	Region found in RelA / SpoT proteins
AK40_2989	PF13291	ACT domain
AK40_2989	PF13328	HD domain
AK40_299	PF07690	Major Facilitator Superfamily
AK40_2990	PF00156	Phosphoribosyl transferase domain
AK40_2991	PF01368	DHH family
AK40_2991	PF02272	DHHA1 domain
AK40_2991	PF10141	AK40_2991
AK40_2992	PF01545	Cation efflux family
AK40_2992	PF16916	AK40_2992
AK40_2993	PF02355	Protein export membrane protein
AK40_2993	PF07549	SecD/SecF GG Motif
AK40_2994	PF13797	AK40_2994
AK40_2995	PF01943	AK40_2995
AK40_2995	PF14667	Polysaccharide biosynthesis C-terminal domain
AK40_2996	PF04239	Protein of unknown function (DUF421)
AK40_2997	PF12670	AK40_2997
AK40_2998	PF02699	Preprotein translocase subunit
AK40_2999	PF01702	Queuine tRNA-ribosyltransferase
AK40_30	PF00583	Acetyltransferase (GNAT) family
AK40_300	PF12840	Helix-turn-helix domain
AK40_3000	PF02547	Queuosine biosynthesis protein
AK40_3001	PF11146	AK40_3001
AK40_3002	PF05491	Holliday junction DNA helicase ruvB C-terminus
AK40_3002	PF05496	Holliday junction DNA helicase ruvB N-terminus
AK40_3003	PF01330	RuvA N terminal domain
AK40_3003	PF07499	RuvA, C-terminal domain
AK40_3003	PF14520	Helix-hairpin-helix domain
AK40_3004	PF01497	Periplasmic binding protein
AK40_3005	PF08955	BofC C-terminal domain
AK40_3005	PF08977	Bypass of Forespore C, N terminal
AK40_3006	PF00892	EamA-like transporter family
AK40_3007	PF01022	Bacterial regulatory protein, arsR family
AK40_3009	PF09580	AK40_3009
AK40_301	PF05977	Transmembrane secretion effector
AK40_3010	PF01476	LysM domain
AK40_3011	PF02445	Quinolinate synthetase A protein
AK40_3012	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
AK40_3012	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
AK40_3013	PF00890	FAD binding domain
AK40_3013	PF02910	Fumarate reductase flavoprotein C-term
AK40_3014	PF00266	Aminotransferase class-V
AK40_3015	PF02829	3H domain
AK40_3015	PF08279	HTH domain
AK40_3016	PF03473	MOSC domain
AK40_3016	PF03475	3-alpha domain
AK40_3017	PF00800	Prephenate dehydratase
AK40_3018	PF02687	AK40_3018
AK40_3019	PF02687	AK40_3019
AK40_302	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AK40_3020	PF00005	ABC transporter
AK40_3021	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_3022	PF00072	Response regulator receiver domain
AK40_3022	PF00486	Transcriptional regulatory protein, C terminal
AK40_3023	PF01018	GTP1/OBG
AK40_3023	PF01926	50S ribosome-binding GTPase
AK40_3023	PF09269	Domain of unknown function (DUF1967)
AK40_3024	PF14682	Sporulation initiation phospho-transferase B, C-terminal
AK40_3024	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
AK40_3025	PF01016	Ribosomal L27 protein
AK40_3026	PF04327	Protein of unknown function (DUF464)
AK40_3027	PF00829	Ribosomal prokaryotic L21 protein
AK40_3028	PF10150	Ribonuclease E/G family
AK40_3029	PF02163	Peptidase family M50
AK40_303	PF09680	AK40_303
AK40_3030	PF01551	Peptidase family M23
AK40_3031	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
AK40_3032	PF03775	Septum formation inhibitor MinC, C-terminal domain
AK40_3033	PF04093	AK40_3033
AK40_3034	PF04085	rod shape-determining protein MreC
AK40_3035	PF06723	MreB/Mbl protein
AK40_3038	PF00589	Phage integrase family
AK40_304	PF09388	Spo0E like sporulation regulatory protein
AK40_3040	PF01042	Endoribonuclease L-PSP
AK40_3042	PF13437	HlyD family secretion protein
AK40_3042	PF13533	Biotin-lipoyl like
AK40_3043	PF00005	ABC transporter
AK40_3043	PF00664	ABC transporter transmembrane region
AK40_3043	PF03412	Peptidase C39 family
AK40_3048	PF01391	Collagen triple helix repeat (20 copies)
AK40_3049	PF04851	Type III restriction enzyme, res subunit
AK40_3049	PF13307	Helicase C-terminal domain
AK40_305	PF17209	AK40_305
AK40_3052	PF00144	Beta-lactamase
AK40_3053	PF13365	Trypsin-like peptidase domain
AK40_3055	PF01381	Helix-turn-helix
AK40_3058	PF13443	Cro/C1-type HTH DNA-binding domain
AK40_3059	PF00589	Phage integrase family
AK40_306	PF13023	HD domain
AK40_3060	PF04002	RadC-like JAB domain
AK40_3061	PF02545	Maf-like protein
AK40_3063	PF02875	Mur ligase family, glutamate ligase domain
AK40_3063	PF08245	Mur ligase middle domain
AK40_3064	PF00133	tRNA synthetases class I (I, L, M and V)
AK40_3064	PF08264	Anticodon-binding domain of tRNA
AK40_3064	PF10458	Valyl tRNA synthetase tRNA binding arm
AK40_3065	PF01636	Phosphotransferase enzyme family
AK40_3066	PF01476	LysM domain
AK40_3067	PF00202	Aminotransferase class-III
AK40_3068	PF00490	Delta-aminolevulinic acid dehydratase
AK40_3069	PF02602	Uroporphyrinogen-III synthase HemD
AK40_307	PF01618	AK40_307
AK40_3070	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
AK40_3070	PF03900	Porphobilinogen deaminase, C-terminal domain
AK40_3071	PF01578	AK40_3071
AK40_3072	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
AK40_3072	PF01488	Shikimate / quinate 5-dehydrogenase
AK40_3072	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
AK40_3073	PF01047	MarR family
AK40_3074	PF02566	OsmC-like protein
AK40_3075	PF01926	50S ribosome-binding GTPase
AK40_3076	PF00004	ATPase family associated with various cellular activities (AAA)
AK40_3076	PF02190	ATP-dependent protease La (LON) domain
AK40_3076	PF05362	Lon protease (S16) C-terminal proteolytic domain
AK40_3077	PF00004	ATPase family associated with various cellular activities (AAA)
AK40_3077	PF05362	Lon protease (S16) C-terminal proteolytic domain
AK40_3078	PF06689	ClpX C4-type zinc finger
AK40_3078	PF07724	AAA domain (Cdc48 subfamily)
AK40_3078	PF10431	C-terminal, D2-small domain, of ClpB protein
AK40_3079	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AK40_3079	PF05697	Bacterial trigger factor protein (TF)
AK40_3079	PF05698	Bacterial trigger factor protein (TF) C-terminus
AK40_308	PF00691	OmpA family
AK40_308	PF13677	AK40_308
AK40_3083	PF11645	PD-(D/E)XK endonuclease
AK40_3084	PF08000	Bacterial PH domain
AK40_3084	PF11724	YvbH-like oligomerisation region
AK40_3087	PF12850	Calcineurin-like phosphoesterase superfamily domain
AK40_3088	PF01725	Ham1 family
AK40_3089	PF01138	3' exoribonuclease family, domain 1
AK40_3089	PF03725	3' exoribonuclease family, domain 2
AK40_309	PF00072	Response regulator receiver domain
AK40_3090	PF10646	AK40_3090
AK40_3091	PF01177	Asp/Glu/Hydantoin racemase
AK40_3092	PF07690	Major Facilitator Superfamily
AK40_3093	PF01965	DJ-1/PfpI family
AK40_3094	PF00440	Bacterial regulatory proteins, tetR family
AK40_3095	PF01965	DJ-1/PfpI family
AK40_3097	PF00196	Bacterial regulatory proteins, luxR family
AK40_3098	PF00860	Permease family
AK40_3099	PF07969	Amidohydrolase family
AK40_310	PF01584	CheW-like domain
AK40_310	PF01627	Hpt domain
AK40_310	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_310	PF02895	Signal transducing histidine kinase, homodimeric domain
AK40_310	PF07194	P2 response regulator binding domain
AK40_3100	PF04024	AK40_3100
AK40_3101	PF01381	Helix-turn-helix
AK40_3101	PF07883	Cupin domain
AK40_3102	PF13536	Multidrug resistance efflux transporter
AK40_3103	PF00230	Major intrinsic protein
AK40_3104	PF02082	Transcriptional regulator
AK40_3105	PF12698	ABC-2 family transporter protein
AK40_3106	PF00005	ABC transporter
AK40_3106	PF13732	AK40_3106
AK40_3107	PF03767	HAD superfamily, subfamily IIIB (Acid phosphatase)
AK40_3108	PF00691	OmpA family
AK40_3108	PF13677	AK40_3108
AK40_3109	PF01618	AK40_3109
AK40_311	PF01052	Surface presentation of antigens (SPOA)
AK40_311	PF04509	CheC-like family
AK40_3110	PF02557	D-alanyl-D-alanine carboxypeptidase
AK40_3111	PF03061	Thioesterase superfamily
AK40_3112	PF13085	2Fe-2S iron-sulfur cluster binding domain
AK40_3112	PF13183	4Fe-4S dicluster domain
AK40_3113	PF00890	FAD binding domain
AK40_3113	PF02910	Fumarate reductase flavoprotein C-term
AK40_3114	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
AK40_3115	PF10702	Protein of unknown function (DUF2507)
AK40_3116	PF01541	GIY-YIG catalytic domain
AK40_3116	PF02151	UvrB/uvrC motif
AK40_3116	PF08459	UvrC Helix-hairpin-helix N-terminal
AK40_3117	PF00085	Thioredoxin
AK40_3118	PF00766	Electron transfer flavoprotein FAD-binding domain
AK40_3118	PF01012	Electron transfer flavoprotein domain
AK40_3119	PF01012	Electron transfer flavoprotein domain
AK40_3120	PF00378	Enoyl-CoA hydratase/isomerase family
AK40_3121	PF00440	Bacterial regulatory proteins, tetR family
AK40_3121	PF08359	YsiA-like protein, C-terminal region
AK40_3122	PF00501	AMP-binding enzyme
AK40_3122	PF13193	AMP-binding enzyme C-terminal domain
AK40_3123	PF01391	Collagen triple helix repeat (20 copies)
AK40_3124	PF01497	Periplasmic binding protein
AK40_3125	PF01032	FecCD transport family
AK40_3126	PF05163	DinB family
AK40_3127	PF12730	AK40_3127
AK40_3128	PF13349	AK40_3128
AK40_3129	PF12730	AK40_3129
AK40_3131	PF00005	ABC transporter
AK40_3132	PF00512	His Kinase A (phospho-acceptor) domain
AK40_3132	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_3133	PF00072	Response regulator receiver domain
AK40_3133	PF00486	Transcriptional regulatory protein, C terminal
AK40_3135	PF09962	AK40_3135
AK40_3136	PF10672	S-adenosylmethionine-dependent methyltransferase
AK40_3137	PF00999	Sodium/hydrogen exchanger family
AK40_3137	PF02254	TrkA-N domain
AK40_3138	PF03992	Antibiotic biosynthesis monooxygenase
AK40_3139	PF04203	Sortase family
AK40_314	PF01739	CheR methyltransferase, SAM binding domain
AK40_314	PF03705	CheR methyltransferase, all-alpha domain
AK40_3140	PF00005	ABC transporter
AK40_3141	PF01032	FecCD transport family
AK40_3142	PF01497	Periplasmic binding protein
AK40_3143	PF05031	Iron Transport-associated domain
AK40_3144	PF05031	Iron Transport-associated domain
AK40_3145	PF05525	AK40_3145
AK40_3146	PF00849	RNA pseudouridylate synthase
AK40_3146	PF01479	S4 domain
AK40_3148	PF00488	MutS domain V
AK40_3148	PF01713	Smr domain
AK40_3149	PF02811	PHP domain
AK40_3149	PF14520	Helix-hairpin-helix domain
AK40_3149	PF14716	Helix-hairpin-helix domain
AK40_3149	PF14791	DNA polymerase beta thumb
AK40_3150	PF02674	AK40_3150
AK40_3151	PF05164	Cell division protein ZapA
AK40_3152	PF01351	Ribonuclease HII
AK40_3152	PF11858	Domain of unknown function (DUF3378)
AK40_3155	PF14115	AK40_3155
AK40_3156	PF00152	tRNA synthetases class II (D, K and N)
AK40_3156	PF01336	OB-fold nucleic acid binding domain
AK40_3157	PF01588	Putative tRNA binding domain
AK40_3157	PF03147	Ferredoxin-fold anticodon binding domain
AK40_3157	PF03483	B3/4 domain
AK40_3157	PF03484	tRNA synthetase B5 domain
AK40_3158	PF01409	tRNA synthetases class II core domain (F)
AK40_3158	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
AK40_3159	PF00588	SpoU rRNA Methylase family
AK40_3159	PF08032	RNA 2'-O ribose methyltransferase substrate binding
AK40_316	PF03885	Protein of unknown function (DUF327)
AK40_3160	PF14098	AK40_3160
AK40_3161	PF01966	HD domain
AK40_3162	PF02517	CAAX protease self-immunity
AK40_3163	PF02517	CAAX protease self-immunity
AK40_3168	PF07690	Major Facilitator Superfamily
AK40_3169	PF16576	AK40_3169
AK40_3170	PF00440	Bacterial regulatory proteins, tetR family
AK40_3170	PF14278	AK40_3170
AK40_3171	PF05343	M42 glutamyl aminopeptidase
AK40_3172	PF08761	dUTPase
AK40_3173	PF00453	Ribosomal protein L20
AK40_3174	PF01632	Ribosomal protein L35
AK40_3175	PF00707	Translation initiation factor IF-3, C-terminal domain
AK40_3175	PF05198	Translation initiation factor IF-3, N-terminal domain
AK40_3176	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
AK40_3176	PF02824	TGS domain
AK40_3176	PF03129	Anticodon binding domain
AK40_3176	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
AK40_3177	PF08812	AK40_3177
AK40_3178	PF01695	IstB-like ATP binding protein
AK40_3178	PF07319	Primosomal protein DnaI N-terminus
AK40_3179	PF07261	Replication initiation and membrane attachment
AK40_318	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AK40_3180	PF03477	ATP cone domain
AK40_3181	PF02675	S-adenosylmethionine decarboxylase
AK40_3182	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AK40_3182	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
AK40_3183	PF01121	Dephospho-CoA kinase
AK40_3184	PF02659	AK40_3184
AK40_3185	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
AK40_3185	PF06827	Zinc finger found in FPG and IleRS
AK40_3185	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
AK40_3186	PF00476	DNA polymerase family A
AK40_3186	PF01367	5'-3' exonuclease, C-terminal SAM fold
AK40_3186	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
AK40_3187	PF00512	His Kinase A (phospho-acceptor) domain
AK40_3187	PF00989	PAS fold
AK40_3187	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_3187	PF16736	AK40_3187
AK40_3188	PF00072	Response regulator receiver domain
AK40_3188	PF00486	Transcriptional regulatory protein, C terminal
AK40_319	PF00669	Bacterial flagellin N-terminal helical region
AK40_319	PF00700	Bacterial flagellin C-terminal helical region
AK40_3191	PF01575	MaoC like domain
AK40_3192	PF00056	lactate/malate dehydrogenase, NAD binding domain
AK40_3192	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
AK40_3193	PF00180	Isocitrate/isopropylmalate dehydrogenase
AK40_3194	PF00285	Citrate synthase
AK40_3195	PF04284	AK40_3195
AK40_3196	PF01594	AK40_3196
AK40_3197	PF04186	AK40_3197
AK40_3198	PF00224	Pyruvate kinase, barrel domain
AK40_3198	PF00391	PEP-utilising enzyme, mobile domain
AK40_3198	PF02887	Pyruvate kinase, alpha/beta domain
AK40_3199	PF00365	Phosphofructokinase
AK40_320	PF02465	AK40_320
AK40_320	PF07195	AK40_320
AK40_3200	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
AK40_3201	PF01039	Carboxyl transferase domain
AK40_3202	PF00392	Bacterial regulatory proteins, gntR family
AK40_3203	PF00390	Malic enzyme, N-terminal domain
AK40_3203	PF03949	Malic enzyme, NAD binding domain
AK40_3204	PF01336	OB-fold nucleic acid binding domain
AK40_3204	PF02811	PHP domain
AK40_3204	PF07733	Bacterial DNA polymerase III alpha subunit
AK40_3204	PF14579	Helix-hairpin-helix motif
AK40_3205	PF14034	AK40_3205
AK40_3207	PF01368	DHH family
AK40_3207	PF02272	DHHA1 domain
AK40_3208	PF14007	AK40_3208
AK40_3209	PF13133	AK40_3209
AK40_321	PF02561	Flagellar protein FliS
AK40_3211	PF00392	Bacterial regulatory proteins, gntR family
AK40_3211	PF00571	CBS domain
AK40_3211	PF03061	Thioesterase superfamily
AK40_3211	PF07085	DRTGG domain
AK40_3213	PF13483	Beta-lactamase superfamily domain
AK40_3214	PF00557	Metallopeptidase family M24
AK40_3214	PF01321	Creatinase/Prolidase N-terminal domain
AK40_3215	PF11518	Protein of unknown function (DUF3221)
AK40_3218	PF10978	AK40_3218
AK40_3219	PF13791	AK40_3219
AK40_3219	PF13800	AK40_3219
AK40_3220	PF04542	Sigma-70 region 2
AK40_3220	PF08281	Sigma-70, region 4
AK40_3222	PF12746	GNAT acetyltransferase
AK40_3223	PF07883	Cupin domain
AK40_3225	PF12844	Helix-turn-helix domain
AK40_3227	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
AK40_3227	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
AK40_3228	PF13561	Enoyl-(Acyl carrier protein) reductase
AK40_3229	PF00582	Universal stress protein family
AK40_323	PF00460	Flagella basal body rod protein
AK40_3231	PF00589	Phage integrase family
AK40_3232	PF00589	Phage integrase family
AK40_3237	PF00206	Lyase
AK40_3237	PF14698	Argininosuccinate lyase C-terminal
AK40_3238	PF00764	Arginosuccinate synthase
AK40_324	PF00460	Flagella basal body rod protein
AK40_324	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AK40_3242	PF02588	AK40_3242
AK40_3243	PF12787	AK40_3243
AK40_3244	PF00293	NUDIX domain
AK40_3245	PF00871	Acetokinase family
AK40_3246	PF02384	N-6 DNA Methylase
AK40_3247	PF08534	Redoxin
AK40_3248	PF09579	AK40_3248
AK40_3249	PF11167	AK40_3249
AK40_325	PF02049	AK40_325
AK40_3250	PF01513	ATP-NAD kinase
AK40_3251	PF07969	Amidohydrolase family
AK40_3252	PF06983	3-demethylubiquinone-9 3-methyltransferase
AK40_3253	PF00501	AMP-binding enzyme
AK40_3253	PF13193	AMP-binding enzyme C-terminal domain
AK40_3254	PF00269	Small, acid-soluble spore proteins, alpha/beta type
AK40_3255	PF02568	Thiamine biosynthesis protein (ThiI)
AK40_3255	PF02926	THUMP domain
AK40_3256	PF00266	Aminotransferase class-V
AK40_3257	PF06160	AK40_3257
AK40_3258	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AK40_3258	PF03466	LysR substrate binding domain
AK40_3259	PF00892	EamA-like transporter family
AK40_326	PF01514	Secretory protein of YscJ/FliF family
AK40_326	PF08345	AK40_326
AK40_3260	PF00440	Bacterial regulatory proteins, tetR family
AK40_3261	PF13185	GAF domain
AK40_3262	PF01053	Cys/Met metabolism PLP-dependent enzyme
AK40_3263	PF00163	Ribosomal protein S4/S9 N-terminal domain
AK40_3263	PF01479	S4 domain
AK40_3266	PF06013	Proteins of 100 residues with WXG
AK40_3266	PF14449	AK40_3266
AK40_3267	PF09346	SMI1 / KNR4 family (SUKH-1)
AK40_3269	PF14154	AK40_3269
AK40_327	PF01706	FliG C-terminal domain
AK40_327	PF14841	FliG middle domain
AK40_327	PF14842	FliG N-terminal domain
AK40_3270	PF00579	tRNA synthetases class I (W and Y)
AK40_3270	PF01479	S4 domain
AK40_3272	PF04542	Sigma-70 region 2
AK40_3272	PF08281	Sigma-70, region 4
AK40_3275	PF00501	AMP-binding enzyme
AK40_3275	PF13193	AMP-binding enzyme C-terminal domain
AK40_3276	PF00583	Acetyltransferase (GNAT) family
AK40_3277	PF00571	CBS domain
AK40_3277	PF01842	ACT domain
AK40_3278	PF00850	Histone deacetylase domain
AK40_3279	PF00561	alpha/beta hydrolase fold
AK40_328	PF02108	AK40_328
AK40_3281	PF00072	Response regulator receiver domain
AK40_3281	PF00486	Transcriptional regulatory protein, C terminal
AK40_3282	PF00512	His Kinase A (phospho-acceptor) domain
AK40_3282	PF00672	HAMP domain
AK40_3282	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_3283	PF12796	Ankyrin repeats (3 copies)
AK40_3284	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
AK40_3285	PF01741	Large-conductance mechanosensitive channel, MscL
AK40_3286	PF13055	AK40_3286
AK40_3288	PF13133	AK40_3288
AK40_3289	PF14119	AK40_3289
AK40_329	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AK40_3290	PF00356	Bacterial regulatory proteins, lacI family
AK40_3290	PF13377	Periplasmic binding protein-like domain
AK40_3291	PF07537	CamS sex pheromone cAM373 precursor
AK40_3292	PF11009	Protein of unknown function (DUF2847)
AK40_3293	PF06103	AK40_3293
AK40_3294	PF02073	Thermophilic metalloprotease (M29)
AK40_3297	PF06713	AK40_3297
AK40_3298	PF02687	AK40_3298
AK40_3299	PF00005	ABC transporter
AK40_33	PF07972	NrdI Flavodoxin like
AK40_3300	PF00583	Acetyltransferase (GNAT) family
AK40_3302	PF13302	Acetyltransferase (GNAT) domain
AK40_3303	PF03551	Transcriptional regulator PadR-like family
AK40_3305	PF01225	Mur ligase family, catalytic domain
AK40_3305	PF02875	Mur ligase family, glutamate ligase domain
AK40_3305	PF08245	Mur ligase middle domain
AK40_3306	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
AK40_3307	PF01580	FtsK/SpoIIIE family
AK40_3307	PF09397	Ftsk gamma domain
AK40_3309	PF01588	Putative tRNA binding domain
AK40_3309	PF14794	Domain of unknown function (DUF4479)
AK40_331	PF02120	Flagellar hook-length control protein FliK
AK40_3310	PF07285	AK40_3310
AK40_3311	PF00085	Thioredoxin
AK40_3312	PF01931	Protein of unknown function DUF84
AK40_3313	PF05343	M42 glutamyl aminopeptidase
AK40_3314	PF03413	Peptidase propeptide and YPEB domain
AK40_3315	PF00753	Metallo-beta-lactamase superfamily
AK40_3316	PF02390	Putative methyltransferase
AK40_3317	PF14165	AK40_3317
AK40_3318	PF01636	Phosphotransferase enzyme family
AK40_3319	PF00128	Alpha amylase, catalytic domain
AK40_3319	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
AK40_332	PF03963	AK40_332
AK40_3320	PF02834	LigT like Phosphoesterase
AK40_3321	PF01546	Peptidase family M20/M25/M40
AK40_3322	PF08220	DeoR-like helix-turn-helix domain
AK40_3323	PF00849	RNA pseudouridylate synthase
AK40_3323	PF01479	S4 domain
AK40_3324	PF01943	AK40_3324
AK40_3324	PF14667	Polysaccharide biosynthesis C-terminal domain
AK40_3325	PF03486	HI0933-like protein
AK40_3326	PF07690	Major Facilitator Superfamily
AK40_3327	PF12840	Helix-turn-helix domain
AK40_3328	PF08327	Activator of Hsp90 ATPase homolog 1-like protein
AK40_3329	PF13119	AK40_3329
AK40_333	PF00460	Flagella basal body rod protein
AK40_333	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AK40_333	PF07559	Flagellar basal body protein FlaE
AK40_3330	PF10957	AK40_3330
AK40_3331	PF10830	AK40_3331
AK40_3332	PF02559	CarD-like/TRCF domain
AK40_3333	PF13561	Enoyl-(Acyl carrier protein) reductase
AK40_3334	PF06800	AK40_3334
AK40_3335	PF13027	AK40_3335
AK40_3336	PF02597	ThiS family
AK40_3337	PF02391	MoaE protein
AK40_3338	PF03205	Molybdopterin guanine dinucleotide synthesis protein B
AK40_3339	PF00994	Probable molybdopterin binding domain
AK40_3339	PF03453	MoeA N-terminal region (domain I and II)
AK40_3339	PF03454	MoeA C-terminal region (domain IV)
AK40_334	PF13107	AK40_334
AK40_3340	PF01967	MoaC family
AK40_3341	PF00899	ThiF family
AK40_3342	PF04055	Radical SAM superfamily
AK40_3342	PF06463	Molybdenum Cofactor Synthesis C
AK40_3342	PF13353	4Fe-4S single cluster domain
AK40_3343	PF01391	Collagen triple helix repeat (20 copies)
AK40_3345	PF10676	AK40_3345
AK40_3346	PF00581	Rhodanese-like domain
AK40_3348	PF00561	alpha/beta hydrolase fold
AK40_3349	PF03323	AK40_3349
AK40_3350	PF03845	AK40_3350
AK40_3351	PF05504	Spore germination B3/ GerAC like, C-terminal
AK40_3353	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
AK40_3354	PF01391	Collagen triple helix repeat (20 copies)
AK40_3355	PF00133	tRNA synthetases class I (I, L, M and V)
AK40_3355	PF08264	Anticodon-binding domain of tRNA
AK40_3355	PF09334	tRNA synthetases class I (M)
AK40_3355	PF13603	Leucyl-tRNA synthetase, Domain 2
AK40_3356	PF07690	Major Facilitator Superfamily
AK40_3357	PF00999	Sodium/hydrogen exchanger family
AK40_3358	PF02080	TrkA-C domain
AK40_3359	PF00589	Phage integrase family
AK40_336	PF00072	Response regulator receiver domain
AK40_336	PF01584	CheW-like domain
AK40_3360	PF02687	AK40_3360
AK40_3362	PF00005	ABC transporter
AK40_3363	PF04235	AK40_3363
AK40_3363	PF07786	AK40_3363
AK40_3365	PF10732	AK40_3365
AK40_3366	PF04055	Radical SAM superfamily
AK40_3366	PF16199	AK40_3366
AK40_3367	PF06962	Putative rRNA methylase
AK40_3368	PF00005	ABC transporter
AK40_337	PF12181	DNA binding domain of the motility gene repressor (MogR)
AK40_3370	PF01177	Asp/Glu/Hydantoin racemase
AK40_3372	PF10026	AK40_3372
AK40_3374	PF03929	AK40_3374
AK40_3376	PF10776	AK40_3376
AK40_3377	PF12146	Putative lysophospholipase
AK40_3378	PF00132	Bacterial transferase hexapeptide (six repeats)
AK40_3379	PF01569	PAP2 superfamily
AK40_338	PF00669	Bacterial flagellin N-terminal helical region
AK40_338	PF00700	Bacterial flagellin C-terminal helical region
AK40_3380	PF00534	Glycosyl transferases group 1
AK40_3380	PF13439	Glycosyltransferase Family 4
AK40_3381	PF12804	MobA-like NTP transferase domain
AK40_3382	PF00994	Probable molybdopterin binding domain
AK40_3386	PF00438	S-adenosylmethionine synthetase, N-terminal domain
AK40_3386	PF02772	S-adenosylmethionine synthetase, central domain
AK40_3386	PF02773	S-adenosylmethionine synthetase, C-terminal domain
AK40_3387	PF01293	Phosphoenolpyruvate carboxykinase
AK40_3389	PF03899	AK40_3389
AK40_339	PF00669	Bacterial flagellin N-terminal helical region
AK40_339	PF00700	Bacterial flagellin C-terminal helical region
AK40_3391	PF00892	EamA-like transporter family
AK40_3392	PF01521	Iron-sulphur cluster biosynthesis
AK40_3394	PF13419	Haloacid dehalogenase-like hydrolase
AK40_3395	PF00455	AK40_3395
AK40_3395	PF08220	DeoR-like helix-turn-helix domain
AK40_3396	PF13419	Haloacid dehalogenase-like hydrolase
AK40_3397	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_3398	PF00512	His Kinase A (phospho-acceptor) domain
AK40_3398	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_3399	PF00561	alpha/beta hydrolase fold
AK40_34	PF00317	Ribonucleotide reductase, all-alpha domain
AK40_34	PF02867	Ribonucleotide reductase, barrel domain
AK40_34	PF08343	Ribonucleotide reductase N-terminal
AK40_340	PF01464	Transglycosylase SLT domain
AK40_3400	PF00884	Sulfatase
AK40_3402	PF13143	AK40_3402
AK40_3403	PF13379	NMT1-like family
AK40_3404	PF00005	ABC transporter
AK40_3405	PF00528	Binding-protein-dependent transport system inner membrane component
AK40_3408	PF13419	Haloacid dehalogenase-like hydrolase
AK40_3409	PF11667	AK40_3409
AK40_341	PF01052	Surface presentation of antigens (SPOA)
AK40_3410	PF00293	NUDIX domain
AK40_3412	PF12606	AK40_3412
AK40_3413	PF13129	AK40_3413
AK40_3414	PF02664	S-Ribosylhomocysteinase (LuxS)
AK40_3415	PF00484	Carbonic anhydrase
AK40_3416	PF01809	AK40_3416
AK40_3417	PF01654	AK40_3417
AK40_3418	PF02322	AK40_3418
AK40_3419	PF10676	AK40_3419
AK40_342	PF01052	Surface presentation of antigens (SPOA)
AK40_342	PF02154	Flagellar motor switch protein FliM
AK40_3420	PF00395	S-layer homology domain
AK40_3420	PF05901	AK40_3420
AK40_3421	PF02698	DUF218 domain
AK40_3422	PF02588	AK40_3422
AK40_3422	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
AK40_3424	PF14042	AK40_3424
AK40_3425	PF13785	AK40_3425
AK40_3426	PF03994	AK40_3426
AK40_3427	PF04012	AK40_3427
AK40_3428	PF17294	AK40_3428
AK40_343	PF01052	Surface presentation of antigens (SPOA)
AK40_3431	PF08963	Protein of unknown function (DUF1878)
AK40_3433	PF00082	Subtilase family
AK40_3435	PF14436	AK40_3435
AK40_3438	PF12669	AK40_3438
AK40_3439	PF02421	Ferrous iron transport protein B
AK40_3439	PF07664	AK40_3439
AK40_3439	PF07670	Nucleoside recognition
AK40_3440	PF04023	FeoA domain
AK40_3441	PF09515	Thiamine transporter protein (Thia_YuaJ)
AK40_3442	PF00512	His Kinase A (phospho-acceptor) domain
AK40_3442	PF00672	HAMP domain
AK40_3442	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_3443	PF00072	Response regulator receiver domain
AK40_3443	PF00486	Transcriptional regulatory protein, C terminal
AK40_3444	PF04203	Sortase family
AK40_3445	PF00746	AK40_3445
AK40_3448	PF00156	Phosphoribosyl transferase domain
AK40_3449	PF00781	Diacylglycerol kinase catalytic domain
AK40_345	PF00813	AK40_345
AK40_3450	PF01385	AK40_3450
AK40_3450	PF07282	AK40_3450
AK40_3450	PF12323	AK40_3450
AK40_3451	PF12784	AK40_3451
AK40_3453	PF06486	Protein of unknown function (DUF1093)
AK40_3454	PF09335	AK40_3454
AK40_3455	PF00398	Ribosomal RNA adenine dimethylase
AK40_3456	PF02687	AK40_3456
AK40_3457	PF00005	ABC transporter
AK40_3458	PF06445	GyrI-like small molecule binding domain
AK40_3458	PF12833	Helix-turn-helix domain
AK40_3459	PF00072	Response regulator receiver domain
AK40_3459	PF00486	Transcriptional regulatory protein, C terminal
AK40_346	PF01313	AK40_346
AK40_3460	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_3461	PF02687	AK40_3461
AK40_3462	PF02687	AK40_3462
AK40_3463	PF00005	ABC transporter
AK40_3464	PF02687	AK40_3464
AK40_3465	PF09680	AK40_3465
AK40_3466	PF02447	AK40_3466
AK40_3467	PF00392	Bacterial regulatory proteins, gntR family
AK40_3467	PF07702	UTRA domain
AK40_3468	PF00294	pfkB family carbohydrate kinase
AK40_3469	PF07071	Protein of unknown function (DUF1341)
AK40_347	PF01311	AK40_347
AK40_3470	PF03841	L-seryl-tRNA selenium transferase
AK40_3472	PF02557	D-alanyl-D-alanine carboxypeptidase
AK40_3473	PF00512	His Kinase A (phospho-acceptor) domain
AK40_3473	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_3474	PF00072	Response regulator receiver domain
AK40_3474	PF00486	Transcriptional regulatory protein, C terminal
AK40_3475	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
AK40_3475	PF13378	Enolase C-terminal domain-like
AK40_3476	PF00501	AMP-binding enzyme
AK40_3476	PF13193	AMP-binding enzyme C-terminal domain
AK40_3477	PF00378	Enoyl-CoA hydratase/isomerase family
AK40_3478	PF00561	alpha/beta hydrolase fold
AK40_3479	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AK40_3479	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AK40_3479	PF16582	AK40_3479
AK40_348	PF01312	FlhB HrpN YscU SpaS Family
AK40_3480	PF00425	chorismate binding enzyme
AK40_3481	PF01040	UbiA prenyltransferase family
AK40_3482	PF01258	Prokaryotic dksA/traR C4-type zinc finger
AK40_3483	PF00313	'Cold-shock' DNA-binding domain
AK40_3484	PF01987	Mitochondrial biogenesis AIM24
AK40_3485	PF01764	Lipase (class 3)
AK40_3487	PF00343	Carbohydrate phosphorylase
AK40_3488	PF00534	Glycosyl transferases group 1
AK40_3488	PF08323	Starch synthase catalytic domain
AK40_3489	PF00132	Bacterial transferase hexapeptide (six repeats)
AK40_3489	PF00483	Nucleotidyl transferase
AK40_349	PF00771	FHIPEP family
AK40_3490	PF00483	Nucleotidyl transferase
AK40_3491	PF00128	Alpha amylase, catalytic domain
AK40_3491	PF02806	Alpha amylase, C-terminal all-beta domain
AK40_3491	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
AK40_3492	PF12389	AK40_3492
AK40_3493	PF00082	Subtilase family
AK40_3493	PF02225	PA domain
AK40_3493	PF05922	Peptidase inhibitor I9
AK40_3493	PF06280	Fn3-like domain (DUF1034)
AK40_3494	PF00056	lactate/malate dehydrogenase, NAD binding domain
AK40_3494	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
AK40_35	PF01844	HNH endonuclease
AK40_350	PF00448	SRP54-type protein, GTPase domain
AK40_351	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AK40_352	PF01411	tRNA synthetases class II (A)
AK40_352	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
AK40_353	PF01978	Sugar-specific transcriptional regulator TrmB
AK40_353	PF11495	Archaeal transcriptional regulator TrmB
AK40_3534	PF02308	AK40_3534
AK40_3535	PF08868	YugN-like family
AK40_3536	PF02254	TrkA-N domain
AK40_3536	PF07885	Ion channel
AK40_3537	PF00342	Phosphoglucose isomerase
AK40_3538	PF04070	AK40_3538
AK40_3539	PF00575	S1 RNA binding domain
AK40_354	PF03591	AK40_354
AK40_3540	PF00155	Aminotransferase class I and II
AK40_3541	PF01037	AsnC family
AK40_3542	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AK40_3542	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AK40_3543	PF12697	Alpha/beta hydrolase family
AK40_3544	PF08958	Domain of unknown function (DUF1871)
AK40_3545	PF00155	Aminotransferase class I and II
AK40_3546	PF00080	Copper/zinc superoxide dismutase (SODC)
AK40_3548	PF08810	Kinase associated protein B
AK40_3549	PF00929	Exonuclease
AK40_355	PF05437	AK40_355
AK40_3550	PF03600	Citrate transporter
AK40_3552	PF08713	DNA alkylation repair enzyme
AK40_3553	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
AK40_3553	PF03129	Anticodon binding domain
AK40_3554	PF03061	Thioesterase superfamily
AK40_3555	PF11738	Protein of unknown function (DUF3298)
AK40_3555	PF13739	Domain of unknown function (DUF4163)
AK40_3556	PF02632	BioY family
AK40_3557	PF00483	Nucleotidyl transferase
AK40_3558	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
AK40_3558	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
AK40_3558	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
AK40_3558	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
AK40_3559	PF02457	DisA bacterial checkpoint controller nucleotide-binding
AK40_3559	PF10372	Bacterial membrane-spanning protein N-terminus
AK40_3560	PF00883	Cytosol aminopeptidase family, catalytic domain
AK40_3560	PF02789	Cytosol aminopeptidase family, N-terminal domain
AK40_3561	PF06725	3D domain
AK40_3562	PF14068	AK40_3562
AK40_3563	PF00293	NUDIX domain
AK40_3564	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AK40_3565	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AK40_3568	PF14526	Integron-associated effector binding protein
AK40_3569	PF07690	Major Facilitator Superfamily
AK40_357	PF13131	AK40_357
AK40_3570	PF13730	AK40_3570
AK40_3571	PF04463	AK40_3571
AK40_3572	PF06486	Protein of unknown function (DUF1093)
AK40_3573	PF01521	Iron-sulphur cluster biosynthesis
AK40_3574	PF01678	Diaminopimelate epimerase
AK40_3575	PF07293	AK40_3575
AK40_3576	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AK40_3577	PF00005	ABC transporter
AK40_3578	PF03649	AK40_3578
AK40_3579	PF03831	PhnA protein
AK40_3579	PF08274	PhnA Zinc-Ribbon
AK40_358	PF01738	Dienelactone hydrolase family
AK40_3580	PF10947	AK40_3580
AK40_3581	PF02517	CAAX protease self-immunity
AK40_3582	PF01909	Nucleotidyltransferase domain
AK40_3582	PF13427	AK40_3582
AK40_3583	PF07315	Protein of unknown function (DUF1462)
AK40_3584	PF01106	NifU-like domain
AK40_3587	PF04608	Phosphatidylglycerophosphatase A
AK40_3588	PF00583	Acetyltransferase (GNAT) family
AK40_3589	PF02687	AK40_3589
AK40_3589	PF12704	MacB-like periplasmic core domain
AK40_359	PF03992	Antibiotic biosynthesis monooxygenase
AK40_3590	PF00005	ABC transporter
AK40_3591	PF02525	Flavodoxin-like fold
AK40_3593	PF13242	HAD-hyrolase-like
AK40_3593	PF13344	Haloacid dehalogenase-like hydrolase
AK40_3594	PF01022	Bacterial regulatory protein, arsR family
AK40_3595	PF01934	Protein of unknown function DUF86
AK40_3596	PF03320	Bacterial fructose-1,6-bisphosphatase, glpX-encoded
AK40_3597	PF11256	AK40_3597
AK40_3599	PF06265	Protein of unknown function (DUF1027)
AK40_36	PF02867	Ribonucleotide reductase, barrel domain
AK40_360	PF08141	AK40_360
AK40_3600	PF09580	AK40_3600
AK40_3601	PF07739	TipAS antibiotic-recognition domain
AK40_3601	PF13411	MerR HTH family regulatory protein
AK40_3602	PF10086	AK40_3602
AK40_3604	PF00300	Histidine phosphatase superfamily (branch 1)
AK40_3605	PF04073	Aminoacyl-tRNA editing domain
AK40_3606	PF04055	Radical SAM superfamily
AK40_3606	PF16881	AK40_3606
AK40_3607	PF01551	Peptidase family M23
AK40_3608	PF09560	AK40_3608
AK40_3609	PF08827	Domain of unknown function (DUF1805)
AK40_361	PF12844	Helix-turn-helix domain
AK40_3610	PF02872	5'-nucleotidase, C-terminal domain
AK40_3611	PF03551	Transcriptional regulator PadR-like family
AK40_3612	PF04892	AK40_3612
AK40_3613	PF01458	Uncharacterized protein family (UPF0051)
AK40_3614	PF01592	NifU-like N terminal domain
AK40_3615	PF00266	Aminotransferase class-V
AK40_3616	PF01458	Uncharacterized protein family (UPF0051)
AK40_3617	PF00005	ABC transporter
AK40_3618	PF03180	NLPA lipoprotein
AK40_3619	PF03180	NLPA lipoprotein
AK40_362	PF07690	Major Facilitator Superfamily
AK40_3620	PF00528	Binding-protein-dependent transport system inner membrane component
AK40_3621	PF00005	ABC transporter
AK40_3621	PF09383	NIL domain
AK40_3623	PF00085	Thioredoxin
AK40_3625	PF01597	Glycine cleavage H-protein
AK40_3626	PF03960	ArsC family
AK40_3628	PF13073	AK40_3628
AK40_363	PF14346	Domain of unknown function (DUF4398)
AK40_3634	PF14378	AK40_3634
AK40_3635	PF13303	AK40_3635
AK40_3636	PF00056	lactate/malate dehydrogenase, NAD binding domain
AK40_3636	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
AK40_3637	PF07875	AK40_3637
AK40_3639	PF02517	CAAX protease self-immunity
AK40_364	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AK40_364	PF03466	LysR substrate binding domain
AK40_3641	PF09946	AK40_3641
AK40_3642	PF01381	Helix-turn-helix
AK40_3643	PF13305	WHG domain
AK40_3644	PF00753	Metallo-beta-lactamase superfamily
AK40_3647	PF00005	ABC transporter
AK40_3649	PF04893	AK40_3649
AK40_365	PF00005	ABC transporter
AK40_3650	PF01944	AK40_3650
AK40_3651	PF16942	AK40_3651
AK40_3652	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AK40_3652	PF02770	Acyl-CoA dehydrogenase, middle domain
AK40_3652	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AK40_3653	PF00108	Thiolase, N-terminal domain
AK40_3653	PF02803	Thiolase, C-terminal domain
AK40_3654	PF00378	Enoyl-CoA hydratase/isomerase family
AK40_3654	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
AK40_3654	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
AK40_3655	PF14115	AK40_3655
AK40_3656	PF00768	D-alanyl-D-alanine carboxypeptidase
AK40_3657	PF01619	Proline dehydrogenase
AK40_3658	PF10835	AK40_3658
AK40_3659	PF01910	Domain of unknown function DUF77
AK40_366	PF13343	Bacterial extracellular solute-binding protein
AK40_3660	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AK40_3660	PF00672	HAMP domain
AK40_3660	PF02743	Cache domain
AK40_3661	PF01978	Sugar-specific transcriptional regulator TrmB
AK40_3661	PF11495	Archaeal transcriptional regulator TrmB
AK40_3664	PF07690	Major Facilitator Superfamily
AK40_3665	PF13520	Amino acid permease
AK40_3668	PF02096	60Kd inner membrane protein
AK40_367	PF00528	Binding-protein-dependent transport system inner membrane component
AK40_3670	PF02588	AK40_3670
AK40_3670	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
AK40_3671	PF13074	AK40_3671
AK40_3672	PF13153	AK40_3672
AK40_3675	PF11368	AK40_3675
AK40_3676	PF01381	Helix-turn-helix
AK40_3678	PF09335	AK40_3678
AK40_3679	PF13123	AK40_3679
AK40_368	PF07521	RNA-metabolising metallo-beta-lactamase
AK40_368	PF10996	Beta-Casp domain
AK40_368	PF12706	Beta-lactamase superfamily domain
AK40_3680	PF03734	L,D-transpeptidase catalytic domain
AK40_3681	PF00072	Response regulator receiver domain
AK40_3681	PF00486	Transcriptional regulatory protein, C terminal
AK40_3682	PF00512	His Kinase A (phospho-acceptor) domain
AK40_3682	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_3683	PF00892	EamA-like transporter family
AK40_3684	PF08264	Anticodon-binding domain of tRNA
AK40_3684	PF09334	tRNA synthetases class I (M)
AK40_3685	PF08241	Methyltransferase domain
AK40_3686	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AK40_3686	PF00672	HAMP domain
AK40_3687	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AK40_3687	PF00672	HAMP domain
AK40_3688	PF01883	Domain of unknown function DUF59
AK40_3689	PF01447	Thermolysin metallopeptidase, catalytic domain
AK40_3689	PF02868	Thermolysin metallopeptidase, alpha-helical domain
AK40_3689	PF03413	Peptidase propeptide and YPEB domain
AK40_3689	PF07504	Fungalysin/Thermolysin Propeptide Motif
AK40_3690	PF02678	Pirin
AK40_3691	PF12802	MarR family
AK40_3692	PF13058	AK40_3692
AK40_3693	PF00999	Sodium/hydrogen exchanger family
AK40_3694	PF02080	TrkA-C domain
AK40_3695	PF01235	AK40_3695
AK40_3696	PF00210	Ferritin-like domain
AK40_3699	PF03641	Possible lysine decarboxylase
AK40_37	PF00268	Ribonucleotide reductase, small chain
AK40_370	PF10787	AK40_370
AK40_3700	PF03819	MazG nucleotide pyrophosphohydrolase domain
AK40_3701	PF00210	Ferritin-like domain
AK40_3703	PF01773	Na+ dependent nucleoside transporter N-terminus
AK40_3703	PF07662	Na+ dependent nucleoside transporter C-terminus
AK40_3704	PF01773	Na+ dependent nucleoside transporter N-terminus
AK40_3704	PF07662	Na+ dependent nucleoside transporter C-terminus
AK40_3705	PF01235	AK40_3705
AK40_3706	PF01235	AK40_3706
AK40_3707	PF13460	NADH(P)-binding
AK40_3708	PF03272	AK40_3708
AK40_3708	PF13402	Peptidase M60-like family
AK40_3708	PF17291	AK40_3708
AK40_3710	PF00248	Aldo/keto reductase family
AK40_3711	PF07690	Major Facilitator Superfamily
AK40_3712	PF01638	HxlR-like helix-turn-helix
AK40_3713	PF07849	AK40_3713
AK40_3714	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AK40_3715	PF00579	tRNA synthetases class I (W and Y)
AK40_3715	PF01479	S4 domain
AK40_3716	PF01565	FAD binding domain
AK40_3716	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
AK40_3717	PF00856	SET domain
AK40_3718	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AK40_3718	PF13295	AK40_3718
AK40_372	PF00190	Cupin
AK40_3720	PF02537	AK40_3720
AK40_3721	PF02537	AK40_3721
AK40_3722	PF13135	AK40_3722
AK40_3723	PF13127	AK40_3723
AK40_3724	PF07690	Major Facilitator Superfamily
AK40_3725	PF00005	ABC transporter
AK40_3725	PF12848	ABC transporter
AK40_3726	PF13302	Acetyltransferase (GNAT) domain
AK40_3727	PF03551	Transcriptional regulator PadR-like family
AK40_3727	PF10400	Virulence activator alpha C-term
AK40_3728	PF07690	Major Facilitator Superfamily
AK40_3729	PF07457	AK40_3729
AK40_373	PF13354	Beta-lactamase enzyme family
AK40_3730	PF06146	AK40_3730
AK40_3731	PF08378	AK40_3731
AK40_3732	PF00005	ABC transporter
AK40_3733	PF01032	FecCD transport family
AK40_3734	PF01032	FecCD transport family
AK40_3735	PF01497	Periplasmic binding protein
AK40_3736	PF00072	Response regulator receiver domain
AK40_3736	PF00486	Transcriptional regulatory protein, C terminal
AK40_3737	PF06527	AK40_3737
AK40_3738	PF05621	AK40_3738
AK40_3739	PF00665	Integrase core domain
AK40_3739	PF08722	TnsA endonuclease N terminal
AK40_374	PF13021	AK40_374
AK40_3748	PF01609	Transposase DDE domain
AK40_3748	PF05598	AK40_3748
AK40_375	PF00300	Histidine phosphatase superfamily (branch 1)
AK40_3750	PF13610	AK40_3750
AK40_3752	PF00005	ABC transporter
AK40_3752	PF00664	ABC transporter transmembrane region
AK40_3752	PF03412	Peptidase C39 family
AK40_3754	PF01609	Transposase DDE domain
AK40_3754	PF05598	AK40_3754
AK40_3755	PF13255	AK40_3755
AK40_3756	PF00854	POT family
AK40_3759	PF01668	SmpB protein
AK40_3760	PF00575	S1 RNA binding domain
AK40_3760	PF00773	RNB domain
AK40_3760	PF08206	Ribonuclease B OB domain
AK40_3761	PF12146	Putative lysophospholipase
AK40_3762	PF03840	Preprotein translocase SecG subunit
AK40_3763	PF04172	AK40_3763
AK40_3764	PF03788	AK40_3764
AK40_3765	PF01156	Inosine-uridine preferring nucleoside hydrolase
AK40_3766	PF00113	Enolase, C-terminal TIM barrel domain
AK40_3766	PF03952	Enolase, N-terminal domain
AK40_3767	PF01676	Metalloenzyme superfamily
AK40_3767	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
AK40_3768	PF00121	Triosephosphate isomerase
AK40_3769	PF00162	Phosphoglycerate kinase
AK40_377	PF00561	alpha/beta hydrolase fold
AK40_3770	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AK40_3770	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
AK40_3771	PF04198	Putative sugar-binding domain
AK40_3772	PF05768	Glutaredoxin-like domain (DUF836)
AK40_3773	PF00309	AK40_3773
AK40_3773	PF04552	Sigma-54, DNA binding domain
AK40_3773	PF04963	Sigma-54 factor, core binding domain
AK40_3775	PF07870	AK40_3775
AK40_3776	PF09580	AK40_3776
AK40_3777	PF03862	AK40_3777
AK40_3778	PF07451	Stage V sporulation protein AD (SpoVAD)
AK40_3779	PF03862	AK40_3779
AK40_3780	PF07870	AK40_3780
AK40_3781	PF04239	Protein of unknown function (DUF421)
AK40_3781	PF07870	AK40_3781
AK40_3782	PF00574	Clp protease
AK40_3783	PF00381	PTS HPr component phosphorylation site
AK40_3784	PF02650	WhiA C-terminal HTH domain
AK40_3784	PF10298	WhiA N-terminal LAGLIDADG-like domain
AK40_3784	PF14527	WhiA LAGLIDADG-like domain
AK40_3785	PF01933	Uncharacterised protein family UPF0052
AK40_3786	PF03668	AK40_3786
AK40_3787	PF00293	NUDIX domain
AK40_3788	PF04018	AK40_3788
AK40_3789	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AK40_379	PF01047	MarR family
AK40_3790	PF13432	Tetratricopeptide repeat
AK40_3791	PF00132	Bacterial transferase hexapeptide (six repeats)
AK40_3792	PF13419	Haloacid dehalogenase-like hydrolase
AK40_3793	PF01790	AK40_3793
AK40_3794	PF02603	HPr Serine kinase N terminus
AK40_3794	PF07475	HPr Serine kinase C-terminal domain
AK40_3795	PF04020	AK40_3795
AK40_3796	PF14101	AK40_3796
AK40_3797	PF00005	ABC transporter
AK40_3798	PF00271	Helicase conserved C-terminal domain
AK40_3798	PF02151	UvrB/uvrC motif
AK40_3798	PF04851	Type III restriction enzyme, res subunit
AK40_3798	PF12344	Ultra-violet resistance protein B
AK40_3799	PF14275	AK40_3799
AK40_38	PF00392	Bacterial regulatory proteins, gntR family
AK40_380	PF13672	Protein phosphatase 2C
AK40_3801	PF13411	MerR HTH family regulatory protein
AK40_3804	PF01381	Helix-turn-helix
AK40_3805	PF03601	AK40_3805
AK40_3806	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AK40_3806	PF03466	LysR substrate binding domain
AK40_3807	PF13411	MerR HTH family regulatory protein
AK40_3808	PF03358	NADPH-dependent FMN reductase
AK40_381	PF00733	Asparagine synthase
AK40_381	PF13537	Glutamine amidotransferase domain
AK40_3810	PF01906	Putative heavy-metal-binding
AK40_3811	PF00005	ABC transporter
AK40_3811	PF00664	ABC transporter transmembrane region
AK40_3813	PF01471	Putative peptidoglycan binding domain
AK40_3813	PF03572	Peptidase family S41
AK40_3813	PF13180	PDZ domain
AK40_3814	PF02687	AK40_3814
AK40_3815	PF00005	ABC transporter
AK40_3816	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
AK40_3817	PF00472	RF-1 domain
AK40_3817	PF03462	PCRF domain
AK40_3818	PF00271	Helicase conserved C-terminal domain
AK40_3818	PF01043	SecA preprotein cross-linking domain
AK40_3818	PF02810	SEC-C motif
AK40_3818	PF07516	SecA Wing and Scaffold domain
AK40_3818	PF07517	SecA DEAD-like domain
AK40_3819	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
AK40_3819	PF16321	AK40_3819
AK40_382	PF04542	Sigma-70 region 2
AK40_382	PF08281	Sigma-70, region 4
AK40_3820	PF00313	'Cold-shock' DNA-binding domain
AK40_3821	PF00156	Phosphoribosyl transferase domain
AK40_3822	PF00271	Helicase conserved C-terminal domain
AK40_3822	PF04851	Type III restriction enzyme, res subunit
AK40_3823	PF00877	NlpC/P60 family
AK40_3824	PF01638	HxlR-like helix-turn-helix
AK40_3825	PF02645	Uncharacterised protein, DegV family COG1307
AK40_3826	PF01205	Uncharacterized protein family UPF0029
AK40_3826	PF09186	Domain of unknown function (DUF1949)
AK40_3827	PF03816	Cell envelope-related transcriptional attenuator domain
AK40_3828	PF02350	UDP-N-acetylglucosamine 2-epimerase
AK40_3829	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
AK40_3829	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
AK40_3829	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
AK40_383	PF13786	Domain of unknown function (DUF4179)
AK40_3830	PF00953	Glycosyl transferase family 4
AK40_3831	PF01522	Polysaccharide deacetylase
AK40_3832	PF00158	Sigma-54 interaction domain
AK40_3832	PF00874	PRD domain
AK40_3832	PF03610	PTS system fructose IIA component
AK40_3833	PF07452	AK40_3833
AK40_3834	PF02417	AK40_3834
AK40_3835	PF04794	YdjC-like protein
AK40_3836	PF02056	Family 4 glycosyl hydrolase
AK40_3836	PF11975	Family 4 glycosyl hydrolase C-terminal domain
AK40_3837	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
AK40_3838	PF02378	Phosphotransferase system, EIIC
AK40_3839	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AK40_3840	PF01564	Spermine/spermidine synthase
AK40_3841	PF02675	S-adenosylmethionine decarboxylase
AK40_3842	PF11457	AK40_3842
AK40_3843	PF04397	LytTr DNA-binding domain
AK40_3844	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
AK40_3845	PF02378	Phosphotransferase system, EIIC
AK40_3846	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AK40_3847	PF00375	Sodium:dicarboxylate symporter family
AK40_3848	PF01757	AK40_3848
AK40_3849	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AK40_385	PF01545	Cation efflux family
AK40_3850	PF04203	Sortase family
AK40_3851	PF00746	AK40_3851
AK40_3852	PF01345	AK40_3852
AK40_3853	PF12698	ABC-2 family transporter protein
AK40_3854	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AK40_3854	PF03466	LysR substrate binding domain
AK40_3857	PF01654	AK40_3857
AK40_3858	PF02322	AK40_3858
AK40_3859	PF02040	AK40_3859
AK40_386	PF13076	AK40_386
AK40_3860	PF01964	ThiC family
AK40_3860	PF13667	ThiC-associated domain
AK40_3861	PF02652	AK40_3861
AK40_3862	PF01385	AK40_3862
AK40_3862	PF07282	AK40_3862
AK40_3862	PF12323	AK40_3862
AK40_3863	PF09685	AK40_3863
AK40_3864	PF09988	AK40_3864
AK40_3865	PF06803	AK40_3865
AK40_3866	PF00884	Sulfatase
AK40_3867	PF01063	Aminotransferase class IV
AK40_3868	PF00877	NlpC/P60 family
AK40_3868	PF08239	Bacterial SH3 domain
AK40_3869	PF01773	Na+ dependent nucleoside transporter N-terminus
AK40_3869	PF07662	Na+ dependent nucleoside transporter C-terminus
AK40_387	PF00392	Bacterial regulatory proteins, gntR family
AK40_387	PF07729	FCD domain
AK40_3870	PF00990	GGDEF domain
AK40_3871	PF13641	Glycosyltransferase like family 2
AK40_3873	PF02028	BCCT family transporter
AK40_3874	PF06725	3D domain
AK40_3874	PF08239	Bacterial SH3 domain
AK40_3875	PF13049	AK40_3875
AK40_3878	PF10508	AK40_3878
AK40_3878	PF12773	AK40_3878
AK40_388	PF00892	EamA-like transporter family
AK40_3880	PF00176	SNF2 family N-terminal domain
AK40_3880	PF00271	Helicase conserved C-terminal domain
AK40_3880	PF12419	AK40_3880
AK40_3881	PF04892	AK40_3881
AK40_3882	PF07872	AK40_3882
AK40_3883	PF11148	AK40_3883
AK40_3884	PF14271	AK40_3884
AK40_3885	PF06338	AK40_3885
AK40_3886	PF04542	Sigma-70 region 2
AK40_3886	PF04545	Sigma-70, region 4
AK40_3887	PF04893	AK40_3887
AK40_3888	PF06930	AK40_3888
AK40_3889	PF02687	AK40_3889
AK40_3889	PF12704	MacB-like periplasmic core domain
AK40_389	PF02492	CobW/HypB/UreG, nucleotide-binding domain
AK40_389	PF07683	Cobalamin synthesis protein cobW C-terminal domain
AK40_3890	PF00005	ABC transporter
AK40_3891	PF16576	AK40_3891
AK40_3892	PF01381	Helix-turn-helix
AK40_3893	PF11683	AK40_3893
AK40_3894	PF07690	Major Facilitator Superfamily
AK40_3895	PF13343	Bacterial extracellular solute-binding protein
AK40_3896	PF13057	AK40_3896
AK40_3897	PF00512	His Kinase A (phospho-acceptor) domain
AK40_3897	PF00672	HAMP domain
AK40_3897	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_3898	PF00072	Response regulator receiver domain
AK40_3898	PF00486	Transcriptional regulatory protein, C terminal
AK40_3899	PF01370	NAD dependent epimerase/dehydratase family
AK40_39	PF00005	ABC transporter
AK40_390	PF03773	AK40_390
AK40_3901	PF03816	Cell envelope-related transcriptional attenuator domain
AK40_3902	PF16363	AK40_3902
AK40_3903	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
AK40_3903	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
AK40_3903	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
AK40_3904	PF00535	Glycosyl transferase family 2
AK40_3905	PF00733	Asparagine synthase
AK40_3906	PF00535	Glycosyl transferase family 2
AK40_3907	PF04932	AK40_3907
AK40_3908	PF01943	AK40_3908
AK40_3909	PF02397	AK40_3909
AK40_391	PF09323	AK40_391
AK40_3910	PF00483	Nucleotidyl transferase
AK40_3912	PF13614	AAA domain
AK40_3913	PF02706	Chain length determinant protein
AK40_3913	PF13807	AK40_3913
AK40_3914	PF13614	AAA domain
AK40_3915	PF07977	FabA-like domain
AK40_3916	PF06723	MreB/Mbl protein
AK40_3917	PF12116	Stage III sporulation protein D
AK40_3918	PF01551	Peptidase family M23
AK40_3919	PF12698	ABC-2 family transporter protein
AK40_392	PF13578	Methyltransferase domain
AK40_3920	PF00005	ABC transporter
AK40_3921	PF00005	ABC transporter
AK40_3921	PF04397	LytTr DNA-binding domain
AK40_3922	PF08486	AK40_3922
AK40_3923	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
AK40_3924	PF08680	Protein of unknown function (DUF1779)
AK40_3925	PF06612	AK40_3925
AK40_3926	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
AK40_3927	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
AK40_3928	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
AK40_3928	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
AK40_3929	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
AK40_393	PF03553	AK40_393
AK40_3930	PF00499	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
AK40_3931	PF12838	4Fe-4S dicluster domain
AK40_3932	PF00146	NADH dehydrogenase
AK40_3933	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
AK40_3934	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
AK40_3935	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
AK40_3936	PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
AK40_3937	PF00563	EAL domain
AK40_3937	PF00990	GGDEF domain
AK40_3937	PF13426	PAS domain
AK40_3938	PF06161	AK40_3938
AK40_3939	PF06161	AK40_3939
AK40_394	PF00206	Lyase
AK40_394	PF10415	Fumarase C C-terminus
AK40_3940	PF00401	ATP synthase, Delta/Epsilon chain, long alpha-helix domain
AK40_3940	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
AK40_3941	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AK40_3941	PF02874	ATP synthase alpha/beta family, beta-barrel domain
AK40_3942	PF00231	ATP synthase
AK40_3943	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AK40_3943	PF00306	ATP synthase alpha/beta chain, C terminal domain
AK40_3943	PF02874	ATP synthase alpha/beta family, beta-barrel domain
AK40_3944	PF00213	ATP synthase delta (OSCP) subunit
AK40_3945	PF00430	ATP synthase B/B' CF(0)
AK40_3946	PF00137	ATP synthase subunit C
AK40_3947	PF00119	ATP synthase A chain
AK40_3948	PF03899	AK40_3948
AK40_3949	PF09527	AK40_3949
AK40_395	PF06713	AK40_395
AK40_3950	PF14681	Uracil phosphoribosyltransferase
AK40_3951	PF00464	Serine hydroxymethyltransferase
AK40_3952	PF04260	Protein of unknown function (DUF436)
AK40_3953	PF02502	Ribose/Galactose Isomerase
AK40_3954	PF01451	Low molecular weight phosphotyrosine protein phosphatase
AK40_3955	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
AK40_3956	PF07681	AK40_3956
AK40_3957	PF01613	Flavin reductase like domain
AK40_3958	PF13071	AK40_3958
AK40_396	PF09860	AK40_396
AK40_3960	PF02659	AK40_3960
AK40_3961	PF01300	Telomere recombination
AK40_3961	PF03481	Putative GTP-binding controlling metal-binding
AK40_3963	PF09551	AK40_3963
AK40_3964	PF13847	Methyltransferase domain
AK40_3965	PF00472	RF-1 domain
AK40_3965	PF03462	PCRF domain
AK40_3966	PF00265	Thymidine kinase
AK40_3967	PF01197	Ribosomal protein L31
AK40_3968	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AK40_3968	PF07497	Rho termination factor, RNA-binding domain
AK40_3968	PF07498	Rho termination factor, N-terminal domain
AK40_3969	PF03320	Bacterial fructose-1,6-bisphosphatase, glpX-encoded
AK40_397	PF01554	MatE
AK40_3970	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
AK40_3971	PF01116	Fructose-bisphosphate aldolase class-II
AK40_3972	PF00072	Response regulator receiver domain
AK40_3973	PF10740	Protein of unknown function (DUF2529)
AK40_3974	PF00117	Glutamine amidotransferase class-I
AK40_3974	PF06418	CTP synthase N-terminus
AK40_3975	PF05066	HB1, ASXL, restriction endonuclease HTH domain
AK40_3976	PF00440	Bacterial regulatory proteins, tetR family
AK40_3977	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AK40_3977	PF02770	Acyl-CoA dehydrogenase, middle domain
AK40_3977	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AK40_3978	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AK40_3978	PF02770	Acyl-CoA dehydrogenase, middle domain
AK40_3978	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AK40_3979	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
AK40_3979	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
AK40_398	PF03575	Peptidase family S51
AK40_3980	PF00108	Thiolase, N-terminal domain
AK40_3980	PF02803	Thiolase, C-terminal domain
AK40_3981	PF02754	AK40_3981
AK40_3981	PF13183	4Fe-4S dicluster domain
AK40_3982	PF01381	Helix-turn-helix
AK40_3985	PF03551	Transcriptional regulator PadR-like family
AK40_3988	PF01381	Helix-turn-helix
AK40_3989	PF00082	Subtilase family
AK40_399	PF13078	AK40_399
AK40_3990	PF02600	Disulfide bond formation protein DsbB
AK40_3991	PF00085	Thioredoxin
AK40_3994	PF13289	AK40_3994
AK40_3996	PF13401	AAA domain
AK40_3998	PF08722	TnsA endonuclease N terminal
AK40_3999	PF13091	PLD-like domain
AK40_4	PF13343	Bacterial extracellular solute-binding protein
AK40_400	PF03965	Penicillinase repressor
AK40_4000	PF03851	UV-endonuclease UvdE
AK40_4001	PF00563	EAL domain
AK40_4001	PF00989	PAS fold
AK40_4001	PF00990	GGDEF domain
AK40_4001	PF13321	AK40_4001
AK40_4002	PF05968	AK40_4002
AK40_4003	PF01381	Helix-turn-helix
AK40_4004	PF07504	Fungalysin/Thermolysin Propeptide Motif
AK40_4005	PF00072	Response regulator receiver domain
AK40_4005	PF00196	Bacterial regulatory proteins, luxR family
AK40_4006	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_4006	PF07730	Histidine kinase
AK40_4007	PF12698	ABC-2 family transporter protein
AK40_4008	PF00005	ABC transporter
AK40_4009	PF00557	Metallopeptidase family M24
AK40_401	PF05569	BlaR1 peptidase M56
AK40_4010	PF05737	Collagen binding domain
AK40_4011	PF02225	PA domain
AK40_4011	PF04389	Peptidase family M28
AK40_4015	PF04542	Sigma-70 region 2
AK40_4015	PF08281	Sigma-70, region 4
AK40_4016	PF00750	tRNA synthetases class I (R)
AK40_4016	PF03485	Arginyl tRNA synthetase N terminal domain
AK40_4016	PF05746	DALR anticodon binding domain
AK40_4017	PF09148	Domain of unknown function (DUF1934)
AK40_4018	PF02016	LD-carboxypeptidase
AK40_4019	PF06486	Protein of unknown function (DUF1093)
AK40_402	PF02683	AK40_402
AK40_4020	PF13303	AK40_4020
AK40_4021	PF00491	Arginase family
AK40_4022	PF01564	Spermine/spermidine synthase
AK40_4022	PF17284	AK40_4022
AK40_4023	PF07690	Major Facilitator Superfamily
AK40_4024	PF13411	MerR HTH family regulatory protein
AK40_4025	PF03009	Glycerophosphoryl diester phosphodiesterase family
AK40_4026	PF00905	Penicillin binding protein transpeptidase domain
AK40_4026	PF00912	Transglycosylase
AK40_4027	PF08741	AK40_4027
AK40_4028	PF02163	Peptidase family M50
AK40_4029	PF01361	Tautomerase enzyme
AK40_403	PF00578	AhpC/TSA family
AK40_4030	PF01966	HD domain
AK40_4031	PF01497	Periplasmic binding protein
AK40_4032	PF00005	ABC transporter
AK40_4033	PF01032	FecCD transport family
AK40_4034	PF01032	FecCD transport family
AK40_4035	PF07293	AK40_4035
AK40_4037	PF17294	AK40_4037
AK40_4038	PF03099	Biotin/lipoate A/B protein ligase family
AK40_4039	PF01515	Phosphate acetyl/butaryl transferase
AK40_404	PF01790	AK40_404
AK40_4040	PF06778	Chlorite dismutase
AK40_4041	PF00768	D-alanyl-D-alanine carboxypeptidase
AK40_4041	PF07943	Penicillin-binding protein 5, C-terminal domain
AK40_4042	PF07486	Cell Wall Hydrolase
AK40_4043	PF09671	AK40_4043
AK40_4044	PF04241	AK40_4044
AK40_4045	PF17261	AK40_4045
AK40_4046	PF02080	TrkA-C domain
AK40_4046	PF02254	TrkA-N domain
AK40_4046	PF07885	Ion channel
AK40_4047	PF00860	Permease family
AK40_4048	PF08282	haloacid dehalogenase-like hydrolase
AK40_4049	PF12823	AK40_4049
AK40_405	PF01381	Helix-turn-helix
AK40_405	PF07883	Cupin domain
AK40_4050	PF03167	Uracil DNA glycosylase superfamily
AK40_4051	PF12679	AK40_4051
AK40_4052	PF00005	ABC transporter
AK40_4053	PF13472	GDSL-like Lipase/Acylhydrolase family
AK40_4054	PF00356	Bacterial regulatory proteins, lacI family
AK40_4054	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
AK40_4055	PF02588	AK40_4055
AK40_4056	PF00742	Homoserine dehydrogenase
AK40_4056	PF01842	ACT domain
AK40_4056	PF03447	Homoserine dehydrogenase, NAD binding domain
AK40_4057	PF04204	Homoserine O-succinyltransferase
AK40_4058	PF01053	Cys/Met metabolism PLP-dependent enzyme
AK40_4059	PF13419	Haloacid dehalogenase-like hydrolase
AK40_4060	PF00239	Resolvase, N terminal domain
AK40_4061	PF01385	AK40_4061
AK40_4061	PF07282	AK40_4061
AK40_4061	PF12323	AK40_4061
AK40_4062	PF00027	Cyclic nucleotide-binding domain
AK40_4063	PF02525	Flavodoxin-like fold
AK40_4064	PF00072	Response regulator receiver domain
AK40_4064	PF00196	Bacterial regulatory proteins, luxR family
AK40_4065	PF07730	Histidine kinase
AK40_4065	PF13185	GAF domain
AK40_4066	PF08543	Phosphomethylpyrimidine kinase
AK40_4067	PF00990	GGDEF domain
AK40_4067	PF07694	5TMR of 5TMR-LYT
AK40_4068	PF04328	AK40_4068
AK40_4069	PF02554	AK40_4069
AK40_4069	PF13722	AK40_4069
AK40_4070	PF00072	Response regulator receiver domain
AK40_4070	PF04397	LytTr DNA-binding domain
AK40_4071	PF07690	Major Facilitator Superfamily
AK40_4072	PF03808	AK40_4072
AK40_4073	PF00534	Glycosyl transferases group 1
AK40_4073	PF13439	Glycosyltransferase Family 4
AK40_4074	PF13425	AK40_4074
AK40_4075	PF03458	AK40_4075
AK40_4076	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AK40_4076	PF11563	Protoglobin
AK40_4077	PF13231	AK40_4077
AK40_4078	PF03061	Thioesterase superfamily
AK40_4079	PF01943	AK40_4079
AK40_408	PF00291	Pyridoxal-phosphate dependent enzyme
AK40_4080	PF00535	Glycosyl transferase family 2
AK40_4081	PF00005	ABC transporter
AK40_4081	PF12848	ABC transporter
AK40_4082	PF13231	AK40_4082
AK40_4083	PF13231	AK40_4083
AK40_4084	PF04138	AK40_4084
AK40_4085	PF00535	Glycosyl transferase family 2
AK40_4086	PF00440	Bacterial regulatory proteins, tetR family
AK40_4087	PF00873	AcrB/AcrD/AcrF family
AK40_4088	PF01625	Peptide methionine sulfoxide reductase
AK40_4088	PF01641	SelR domain
AK40_4089	PF01594	AK40_4089
AK40_409	PF04286	AK40_409
AK40_4090	PF04172	AK40_4090
AK40_4091	PF03788	AK40_4091
AK40_4092	PF00072	Response regulator receiver domain
AK40_4092	PF04397	LytTr DNA-binding domain
AK40_4093	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_4093	PF06580	AK40_4093
AK40_4093	PF07694	5TMR of 5TMR-LYT
AK40_4093	PF15714	AK40_4093
AK40_4094	PF07690	Major Facilitator Superfamily
AK40_4095	PF02028	BCCT family transporter
AK40_4096	PF02898	Nitric oxide synthase, oxygenase domain
AK40_4097	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
AK40_4097	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
AK40_4098	PF01370	NAD dependent epimerase/dehydratase family
AK40_4099	PF02293	AmiS/UreI family transporter
AK40_41	PF00005	ABC transporter
AK40_4101	PF16363	AK40_4101
AK40_4102	PF03006	AK40_4102
AK40_4103	PF08876	AK40_4103
AK40_4104	PF00270	DEAD/DEAH box helicase
AK40_4104	PF00271	Helicase conserved C-terminal domain
AK40_4104	PF03880	DbpA RNA binding domain
AK40_4105	PF01757	AK40_4105
AK40_4106	PF00478	IMP dehydrogenase / GMP reductase domain
AK40_4107	PF01432	Peptidase family M3
AK40_4107	PF08439	Oligopeptidase F
AK40_4108	PF04055	Radical SAM superfamily
AK40_4108	PF13186	Iron-sulfur cluster-binding domain
AK40_4108	PF13394	4Fe-4S single cluster domain
AK40_4110	PF01844	HNH endonuclease
AK40_4111	PF02590	Predicted SPOUT methyltransferase
AK40_4112	PF14116	AK40_4112
AK40_4113	PF13180	PDZ domain
AK40_4113	PF13365	Trypsin-like peptidase domain
AK40_4114	PF00753	Metallo-beta-lactamase superfamily
AK40_4115	PF09648	YycH protein
AK40_4116	PF07435	YycH protein
AK40_4117	PF00512	His Kinase A (phospho-acceptor) domain
AK40_4117	PF00672	HAMP domain
AK40_4117	PF00989	PAS fold
AK40_4117	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_4118	PF00072	Response regulator receiver domain
AK40_4118	PF00486	Transcriptional regulatory protein, C terminal
AK40_4123	PF00709	Adenylosuccinate synthetase
AK40_4124	PF00772	DnaB-like helicase N terminal domain
AK40_4124	PF03796	DnaB-like helicase C terminal domain
AK40_4125	PF01281	Ribosomal protein L9, N-terminal domain
AK40_4125	PF03948	Ribosomal protein L9, C-terminal domain
AK40_4126	PF01368	DHH family
AK40_4126	PF02272	DHHA1 domain
AK40_4127	PF09991	AK40_4127
AK40_4128	PF01084	Ribosomal protein S18
AK40_4129	PF00436	Single-strand binding protein family
AK40_413	PF04542	Sigma-70 region 2
AK40_413	PF08281	Sigma-70, region 4
AK40_4130	PF01250	Ribosomal protein S6
AK40_4131	PF01926	50S ribosome-binding GTPase
AK40_4131	PF06071	Protein of unknown function (DUF933)
AK40_4132	PF06107	AK40_4132
AK40_4133	PF00924	Mechanosensitive ion channel
AK40_4134	PF06866	AK40_4134
AK40_4135	PF01381	Helix-turn-helix
AK40_4135	PF02195	ParB-like nuclease domain
AK40_4136	PF13614	AAA domain
AK40_4137	PF02195	ParB-like nuclease domain
AK40_4138	PF02527	rRNA small subunit methyltransferase G
AK40_4139	PF01134	Glucose inhibited division protein A
AK40_4139	PF13932	GidA associated domain 3
AK40_414	PF00072	Response regulator receiver domain
AK40_414	PF00196	Bacterial regulatory proteins, luxR family
AK40_4140	PF01926	50S ribosome-binding GTPase
AK40_4140	PF10396	GTP-binding protein TrmE N-terminus
AK40_4140	PF12631	Catalytic cysteine-containing C-terminus of GTPase, MnmE
AK40_4141	PF01424	R3H domain
AK40_4141	PF13083	KH domain
AK40_4141	PF14804	Jag N-terminus
AK40_4142	PF02096	60Kd inner membrane protein
AK40_4143	PF00825	Ribonuclease P
AK40_4144	PF00468	Ribosomal protein L34
AK40_4145	PF00308	Bacterial dnaA  protein
AK40_4145	PF08299	Bacterial dnaA protein helix-turn-helix
AK40_4145	PF11638	DnaA N-terminal domain
AK40_4146	PF00712	DNA polymerase III beta subunit, N-terminal domain
AK40_4146	PF02767	DNA polymerase III beta subunit, central domain
AK40_4146	PF02768	DNA polymerase III beta subunit, C-terminal domain
AK40_4147	PF13275	S4 domain
AK40_4148	PF02463	RecF/RecN/SMC N terminal domain
AK40_4149	PF00204	DNA gyrase B
AK40_4149	PF00986	DNA gyrase B subunit, carboxyl terminus
AK40_4149	PF01751	Toprim domain
AK40_4149	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_415	PF07730	Histidine kinase
AK40_4150	PF00521	DNA gyrase/topoisomerase IV, subunit A
AK40_4150	PF03989	DNA gyrase C-terminal domain, beta-propeller
AK40_4157	PF14175	AK40_4157
AK40_4158	PF00478	IMP dehydrogenase / GMP reductase domain
AK40_4158	PF00571	CBS domain
AK40_4159	PF00768	D-alanyl-D-alanine carboxypeptidase
AK40_4159	PF07943	Penicillin-binding protein 5, C-terminal domain
AK40_416	PF00005	ABC transporter
AK40_416	PF13732	AK40_416
AK40_4160	PF01680	SOR/SNZ family
AK40_4161	PF01174	SNO glutamine amidotransferase family
AK40_4162	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
AK40_4162	PF02403	Seryl-tRNA synthetase N-terminal domain
AK40_4164	PF04545	Sigma-70, region 4
AK40_4164	PF12677	AK40_4164
AK40_4165	PF01712	Deoxynucleoside kinase
AK40_4166	PF01712	Deoxynucleoside kinase
AK40_4167	PF00857	Isochorismatase family
AK40_4168	PF14437	AK40_4168
AK40_4169	PF12169	DNA polymerase III subunits gamma and tau domain III
AK40_4169	PF13177	DNA polymerase III, delta subunit
AK40_417	PF12698	ABC-2 family transporter protein
AK40_4170	PF02575	YbaB/EbfC DNA-binding family
AK40_4171	PF02132	RecR protein
AK40_4171	PF13662	Toprim domain
AK40_4172	PF10704	AK40_4172
AK40_4173	PF07441	AK40_4173
AK40_418	PF12698	ABC-2 family transporter protein
AK40_4180	PF10764	AK40_4180
AK40_4181	PF01276	Orn/Lys/Arg decarboxylase, major domain
AK40_4181	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
AK40_4182	PF02223	Thymidylate kinase
AK40_4183	PF13177	DNA polymerase III, delta subunit
AK40_4184	PF04468	AK40_4184
AK40_4185	PF06156	AK40_4185
AK40_4186	PF05175	Methyltransferase small domain
AK40_4187	PF01541	GIY-YIG catalytic domain
AK40_4188	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
AK40_4189	PF04014	Antidote-toxin recognition MazE
AK40_419	PF13091	PLD-like domain
AK40_4190	PF01588	Putative tRNA binding domain
AK40_4190	PF08264	Anticodon-binding domain of tRNA
AK40_4190	PF09334	tRNA synthetases class I (M)
AK40_4191	PF01026	TatD related DNase
AK40_4192	PF13331	AK40_4192
AK40_4192	PF13662	Toprim domain
AK40_4193	PF00398	Ribosomal RNA adenine dimethylase
AK40_4194	PF05582	AK40_4194
AK40_4195	PF06257	Protein of unknown function (DUF1021)
AK40_4196	PF00269	Small, acid-soluble spore proteins, alpha/beta type
AK40_4197	PF00288	GHMP kinases N terminal domain
AK40_4197	PF08544	GHMP kinases C terminal
AK40_4198	PF00156	Phosphoribosyl transferase domain
AK40_4198	PF09182	Bacterial purine repressor, N-terminal
AK40_4199	PF01042	Endoribonuclease L-PSP
AK40_42	PF12730	AK40_42
AK40_420	PF00696	Amino acid kinase family
AK40_4200	PF04026	SpoVG
AK40_4201	PF00132	Bacterial transferase hexapeptide (six repeats)
AK40_4201	PF00483	Nucleotidyl transferase
AK40_4202	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
AK40_4202	PF14572	Phosphoribosyl synthetase-associated domain
AK40_4203	PF01195	Peptidyl-tRNA hydrolase
AK40_4204	PF10955	AK40_4204
AK40_4205	PF00270	DEAD/DEAH box helicase
AK40_4205	PF00271	Helicase conserved C-terminal domain
AK40_4205	PF02559	CarD-like/TRCF domain
AK40_4205	PF03461	TRCF domain
AK40_4206	PF04014	Antidote-toxin recognition MazE
AK40_4206	PF15714	AK40_4206
AK40_4207	PF01943	AK40_4207
AK40_4207	PF14667	Polysaccharide biosynthesis C-terminal domain
AK40_4208	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
AK40_4208	PF03819	MazG nucleotide pyrophosphohydrolase domain
AK40_4209	PF01479	S4 domain
AK40_421	PF00375	Sodium:dicarboxylate symporter family
AK40_4210	PF07873	YabP family
AK40_4211	PF09578	AK40_4211
AK40_4212	PF04977	Septum formation initiator
AK40_4213	PF00575	S1 RNA binding domain
AK40_4216	PF07228	Stage II sporulation protein E (SpoIIE)
AK40_4217	PF01171	PP-loop family
AK40_4217	PF09179	TilS substrate binding domain
AK40_4217	PF11734	TilS substrate C-terminal domain
AK40_4218	PF00156	Phosphoribosyl transferase domain
AK40_4219	PF00004	ATPase family associated with various cellular activities (AAA)
AK40_4219	PF01434	Peptidase family M41
AK40_4219	PF06480	FtsH Extracellular
AK40_422	PF00206	Lyase
AK40_422	PF10415	Fumarase C C-terminus
AK40_4220	PF03309	Type III pantothenate kinase
AK40_4221	PF01430	Hsp33 protein
AK40_4222	PF00291	Pyridoxal-phosphate dependent enzyme
AK40_4223	PF00425	chorismate binding enzyme
AK40_4223	PF04715	Anthranilate synthase component I, N terminal region
AK40_4224	PF00117	Glutamine amidotransferase class-I
AK40_4225	PF01063	Aminotransferase class IV
AK40_4226	PF00809	Pterin binding enzyme
AK40_4227	PF02152	Dihydroneopterin aldolase
AK40_4228	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
AK40_4229	PF01381	Helix-turn-helix
AK40_423	PF00390	Malic enzyme, N-terminal domain
AK40_423	PF03949	Malic enzyme, NAD binding domain
AK40_4230	PF01207	Dihydrouridine synthase (Dus)
AK40_4231	PF00152	tRNA synthetases class II (D, K and N)
AK40_4231	PF01336	OB-fold nucleic acid binding domain
AK40_4236	PF05848	Firmicute transcriptional repressor of class III stress genes (CtsR)
AK40_4237	PF02151	UvrB/uvrC motif
AK40_4238	PF00217	ATP:guanido phosphotransferase, C-terminal catalytic domain
AK40_4239	PF00004	ATPase family associated with various cellular activities (AAA)
AK40_4239	PF02151	UvrB/uvrC motif
AK40_4239	PF02861	Clp amino terminal domain
AK40_4239	PF07724	AAA domain (Cdc48 subfamily)
AK40_4239	PF10431	C-terminal, D2-small domain, of ClpB protein
AK40_424	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_4240	PF13481	AAA domain
AK40_4240	PF13541	Subunit ChlI of Mg-chelatase
AK40_4241	PF02457	DisA bacterial checkpoint controller nucleotide-binding
AK40_4241	PF10635	DisA bacterial checkpoint controller linker region
AK40_4243	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
AK40_4244	PF02542	YgbB family
AK40_4245	PF00749	tRNA synthetases class I (E and Q), catalytic domain
AK40_4246	PF00132	Bacterial transferase hexapeptide (six repeats)
AK40_4246	PF06426	Serine acetyltransferase, N-terminal
AK40_4247	PF01406	tRNA synthetases class I (C) catalytic domain
AK40_4247	PF09190	DALR domain
AK40_4248	PF00636	Ribonuclease III domain
AK40_4249	PF00588	SpoU rRNA Methylase family
AK40_4249	PF08032	RNA 2'-O ribose methyltransferase substrate binding
AK40_425	PF00072	Response regulator receiver domain
AK40_425	PF08664	AK40_425
AK40_4250	PF05991	AK40_4250
AK40_4251	PF04542	Sigma-70 region 2
AK40_4251	PF08281	Sigma-70, region 4
AK40_4252	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
AK40_4253	PF00467	KOW motif
AK40_4253	PF02357	Transcription termination factor nusG
AK40_4254	PF00298	Ribosomal protein L11, RNA binding domain
AK40_4254	PF03946	Ribosomal protein L11, N-terminal domain
AK40_4255	PF00687	Ribosomal protein L1p/L10e family
AK40_4256	PF00466	Ribosomal protein L10
AK40_4257	PF00542	Ribosomal protein L7/L12 C-terminal domain
AK40_4257	PF16320	AK40_4257
AK40_4258	PF05175	Methyltransferase small domain
AK40_4259	PF00562	RNA polymerase Rpb2, domain 6
AK40_4259	PF04560	RNA polymerase Rpb2, domain 7
AK40_4259	PF04561	RNA polymerase Rpb2, domain 2
AK40_4259	PF04563	RNA polymerase beta subunit
AK40_4259	PF04565	RNA polymerase Rpb2, domain 3
AK40_4259	PF10385	RNA polymerase beta subunit external 1 domain
AK40_426	PF00176	SNF2 family N-terminal domain
AK40_426	PF00271	Helicase conserved C-terminal domain
AK40_426	PF04434	AK40_426
AK40_426	PF08455	AK40_426
AK40_4260	PF00623	RNA polymerase Rpb1, domain 2
AK40_4260	PF04983	RNA polymerase Rpb1, domain 3
AK40_4260	PF04997	RNA polymerase Rpb1, domain 1
AK40_4260	PF04998	RNA polymerase Rpb1, domain 5
AK40_4260	PF05000	RNA polymerase Rpb1, domain 4
AK40_4261	PF01248	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
AK40_4262	PF00164	Ribosomal protein S12/S23
AK40_4263	PF00177	Ribosomal protein S7p/S5e
AK40_4264	PF00009	Elongation factor Tu GTP binding domain
AK40_4264	PF00679	Elongation factor G C-terminus
AK40_4264	PF03144	Elongation factor Tu domain 2
AK40_4264	PF03764	Elongation factor G, domain IV
AK40_4264	PF14492	Elongation Factor G, domain II
AK40_4265	PF00009	Elongation factor Tu GTP binding domain
AK40_4265	PF03143	Elongation factor Tu C-terminal domain
AK40_4265	PF03144	Elongation factor Tu domain 2
AK40_4266	PF00338	Ribosomal protein S10p/S20e
AK40_4267	PF00297	Ribosomal protein L3
AK40_4268	PF00573	Ribosomal protein L4/L1 family
AK40_4269	PF00276	Ribosomal protein L23
AK40_427	PF13070	AK40_427
AK40_4270	PF00181	Ribosomal Proteins L2, RNA binding domain
AK40_4270	PF03947	Ribosomal Proteins L2, C-terminal domain
AK40_4271	PF00203	Ribosomal protein S19
AK40_4272	PF00237	Ribosomal protein L22p/L17e
AK40_4273	PF00189	Ribosomal protein S3, C-terminal domain
AK40_4273	PF07650	KH domain
AK40_4274	PF00252	Ribosomal protein L16p/L10e
AK40_4275	PF00831	Ribosomal L29 protein
AK40_4276	PF00366	Ribosomal protein S17
AK40_4277	PF00238	Ribosomal protein L14p/L23e
AK40_4278	PF00467	KOW motif
AK40_4278	PF17136	AK40_4278
AK40_4279	PF00281	Ribosomal protein L5
AK40_4279	PF00673	ribosomal L5P family C-terminus
AK40_428	PF03590	Aspartate-ammonia ligase
AK40_4280	PF00253	Ribosomal protein S14p/S29e
AK40_4281	PF00410	Ribosomal protein S8
AK40_4282	PF00347	Ribosomal protein L6
AK40_4283	PF00861	Ribosomal L18p/L5e family
AK40_4284	PF00333	Ribosomal protein S5, N-terminal domain
AK40_4284	PF03719	Ribosomal protein S5, C-terminal domain
AK40_4285	PF00327	Ribosomal protein L30p/L7e
AK40_4286	PF00828	Ribosomal protein L18e/L15
AK40_4287	PF00344	SecY translocase
AK40_4288	PF00406	Adenylate kinase
AK40_4288	PF05191	Adenylate kinase, active site lid
AK40_4289	PF00557	Metallopeptidase family M24
AK40_429	PF01381	Helix-turn-helix
AK40_4290	PF01176	Translation initiation factor 1A / IF-1
AK40_4291	PF00444	Ribosomal protein L36
AK40_4292	PF00416	Ribosomal protein S13/S18
AK40_4293	PF00411	Ribosomal protein S11
AK40_4294	PF01000	RNA polymerase Rpb3/RpoA insert domain
AK40_4294	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
AK40_4294	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
AK40_4295	PF01196	Ribosomal protein L17
AK40_4296	PF00005	ABC transporter
AK40_4297	PF00005	ABC transporter
AK40_4298	PF02361	Cobalt transport protein
AK40_4299	PF01416	tRNA pseudouridine synthase
AK40_43	PF02517	CAAX protease self-immunity
AK40_430	PF00696	Amino acid kinase family
AK40_430	PF01842	ACT domain
AK40_430	PF13840	ACT domain
AK40_4300	PF00572	Ribosomal protein L13
AK40_4301	PF00380	Ribosomal protein S9/S16
AK40_4302	PF10730	AK40_4302
AK40_4303	PF01520	N-acetylmuramoyl-L-alanine amidase
AK40_4304	PF01883	Domain of unknown function DUF59
AK40_4304	PF10609	ParA/MinD ATPase like
AK40_4306	PF14089	AK40_4306
AK40_4307	PF01522	Polysaccharide deacetylase
AK40_431	PF13781	AK40_431
AK40_432	PF13761	AK40_432
AK40_4322	PF02595	Glycerate kinase family
AK40_4323	PF00491	Arginase family
AK40_4324	PF02457	DisA bacterial checkpoint controller nucleotide-binding
AK40_4325	PF07949	YbbR-like protein
AK40_4326	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
AK40_4326	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
AK40_4326	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
AK40_4326	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
AK40_4327	PF01380	SIS domain
AK40_4327	PF13522	Glutamine amidotransferase domain
AK40_433	PF14158	AK40_433
AK40_4330	PF00392	Bacterial regulatory proteins, gntR family
AK40_4330	PF07729	FCD domain
AK40_4331	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
AK40_4331	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
AK40_4332	PF02447	AK40_4332
AK40_4333	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
AK40_4333	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AK40_4334	PF00326	Prolyl oligopeptidase family
AK40_4335	PF14066	AK40_4335
AK40_4336	PF07681	AK40_4336
AK40_4337	PF13791	AK40_4337
AK40_4337	PF13800	AK40_4337
AK40_4338	PF04542	Sigma-70 region 2
AK40_4338	PF08281	Sigma-70, region 4
AK40_4339	PF16781	AK40_4339
AK40_434	PF00293	NUDIX domain
AK40_4340	PF13561	Enoyl-(Acyl carrier protein) reductase
AK40_4341	PF00528	Binding-protein-dependent transport system inner membrane component
AK40_4342	PF00005	ABC transporter
AK40_4342	PF09383	NIL domain
AK40_4343	PF03180	NLPA lipoprotein
AK40_4344	PF00107	Zinc-binding dehydrogenase
AK40_4344	PF08240	Alcohol dehydrogenase GroES-like domain
AK40_4346	PF01565	FAD binding domain
AK40_4346	PF04030	D-arabinono-1,4-lactone oxidase
AK40_4347	PF07690	Major Facilitator Superfamily
AK40_4348	PF13139	AK40_4348
AK40_4349	PF07690	Major Facilitator Superfamily
AK40_435	PF00395	S-layer homology domain
AK40_435	PF01520	N-acetylmuramoyl-L-alanine amidase
AK40_4351	PF00528	Binding-protein-dependent transport system inner membrane component
AK40_4352	PF00528	Binding-protein-dependent transport system inner membrane component
AK40_4352	PF12911	AK40_4352
AK40_4353	PF00005	ABC transporter
AK40_4353	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AK40_4354	PF00005	ABC transporter
AK40_4354	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AK40_4355	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AK40_4356	PF14039	AK40_4356
AK40_4357	PF12833	Helix-turn-helix domain
AK40_4359	PF00440	Bacterial regulatory proteins, tetR family
AK40_436	PF00395	S-layer homology domain
AK40_436	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
AK40_4360	PF12698	ABC-2 family transporter protein
AK40_4361	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AK40_4362	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AK40_4363	PF00248	Aldo/keto reductase family
AK40_4364	PF03807	NADP oxidoreductase coenzyme F420-dependent
AK40_4364	PF14748	Pyrroline-5-carboxylate reductase dimerisation
AK40_4365	PF04973	AK40_4365
AK40_4366	PF06800	AK40_4366
AK40_4367	PF00528	Binding-protein-dependent transport system inner membrane component
AK40_4368	PF13531	Bacterial extracellular solute-binding protein
AK40_4369	PF12727	PBP superfamily domain
AK40_4369	PF12728	Helix-turn-helix domain
AK40_4370	PF13134	AK40_4370
AK40_4372	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AK40_4372	PF03466	LysR substrate binding domain
AK40_4373	PF00892	EamA-like transporter family
AK40_4374	PF14142	AK40_4374
AK40_4375	PF13134	AK40_4375
AK40_4376	PF01553	Acyltransferase
AK40_4378	PF00356	Bacterial regulatory proteins, lacI family
AK40_4378	PF13377	Periplasmic binding protein-like domain
AK40_4379	PF14470	Bacterial PH domain
AK40_4380	PF02588	AK40_4380
AK40_4380	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
AK40_4381	PF06486	Protein of unknown function (DUF1093)
AK40_4383	PF01026	TatD related DNase
AK40_4384	PF16472	AK40_4384
AK40_4384	PF16800	AK40_4384
AK40_4385	PF10096	AK40_4385
AK40_4386	PF01464	Transglycosylase SLT domain
AK40_4387	PF16285	AK40_4387
AK40_4389	PF00005	ABC transporter
AK40_4389	PF12848	ABC transporter
AK40_439	PF02554	AK40_439
AK40_439	PF13722	AK40_439
AK40_4392	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AK40_4393	PF00528	Binding-protein-dependent transport system inner membrane component
AK40_4394	PF00528	Binding-protein-dependent transport system inner membrane component
AK40_4394	PF12911	AK40_4394
AK40_4395	PF00005	ABC transporter
AK40_4395	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AK40_4396	PF00005	ABC transporter
AK40_4396	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AK40_4397	PF08282	haloacid dehalogenase-like hydrolase
AK40_4398	PF13134	AK40_4398
AK40_4399	PF13134	AK40_4399
AK40_44	PF13052	AK40_44
AK40_440	PF03976	Polyphosphate kinase 2 (PPK2)
AK40_4400	PF13134	AK40_4400
AK40_4401	PF13134	AK40_4401
AK40_4402	PF13134	AK40_4402
AK40_4403	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AK40_4403	PF14696	Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal
AK40_4404	PF01557	Fumarylacetoacetate (FAA) hydrolase family
AK40_4405	PF04209	homogentisate 1,2-dioxygenase
AK40_4406	PF13520	Amino acid permease
AK40_4407	PF07690	Major Facilitator Superfamily
AK40_4408	PF01820	D-ala D-ala ligase N-terminus
AK40_4408	PF07478	D-ala D-ala ligase C-terminus
AK40_4409	PF01225	Mur ligase family, catalytic domain
AK40_4409	PF02875	Mur ligase family, glutamate ligase domain
AK40_4409	PF08245	Mur ligase middle domain
AK40_441	PF07690	Major Facilitator Superfamily
AK40_4410	PF00270	DEAD/DEAH box helicase
AK40_4410	PF00271	Helicase conserved C-terminal domain
AK40_4411	PF01694	Rhomboid family
AK40_4412	PF03851	UV-endonuclease UvdE
AK40_4413	PF01648	4'-phosphopantetheinyl transferase superfamily
AK40_4415	PF00842	Alanine racemase, C-terminal domain
AK40_4415	PF01168	Alanine racemase, N-terminal domain
AK40_4417	PF02452	PemK-like protein
AK40_4418	PF00575	S1 RNA binding domain
AK40_4418	PF09371	Tex-like protein N-terminal domain
AK40_4418	PF12836	Helix-hairpin-helix motif
AK40_4418	PF16921	AK40_4418
AK40_4419	PF10263	AK40_4419
AK40_4419	PF17283	AK40_4419
AK40_442	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
AK40_442	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
AK40_4437	PF02367	Uncharacterised P-loop hydrolase UPF0079
AK40_4438	PF00814	Glycoprotease family
AK40_4439	PF00583	Acetyltransferase (GNAT) family
AK40_444	PF01926	50S ribosome-binding GTPase
AK40_444	PF13167	AK40_444
AK40_444	PF16360	AK40_444
AK40_4440	PF00814	Glycoprotease family
AK40_4441	PF00005	ABC transporter
AK40_4441	PF12848	ABC transporter
AK40_4441	PF16326	AK40_4441
AK40_4442	PF02629	CoA binding domain
AK40_4442	PF06971	Putative DNA-binding protein N-terminus
AK40_4443	PF14146	AK40_4443
AK40_4444	PF02517	CAAX protease self-immunity
AK40_4445	PF00166	Chaperonin 10 Kd subunit
AK40_4446	PF00118	TCP-1/cpn60 chaperonin family
AK40_4448	PF14568	SMI1-KNR4 cell-wall
AK40_4449	PF00117	Glutamine amidotransferase class-I
AK40_4449	PF00958	GMP synthase C terminal domain
AK40_4449	PF02540	NAD synthase
AK40_445	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AK40_4450	PF00860	Permease family
AK40_4451	PF00072	Response regulator receiver domain
AK40_4451	PF00486	Transcriptional regulatory protein, C terminal
AK40_4452	PF00512	His Kinase A (phospho-acceptor) domain
AK40_4452	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_4457	PF12146	Putative lysophospholipase
AK40_4458	PF01323	DSBA-like thioredoxin domain
AK40_446	PF07690	Major Facilitator Superfamily
AK40_4468	PF02673	AK40_4468
AK40_4469	PF12730	AK40_4469
AK40_447	PF00291	Pyridoxal-phosphate dependent enzyme
AK40_4470	PF00005	ABC transporter
AK40_4471	PF00512	His Kinase A (phospho-acceptor) domain
AK40_4471	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_4472	PF00072	Response regulator receiver domain
AK40_4472	PF00486	Transcriptional regulatory protein, C terminal
AK40_4477	PF00892	EamA-like transporter family
AK40_4478	PF03567	Sulfotransferase family
AK40_448	PF13302	Acetyltransferase (GNAT) domain
AK40_4483	PF00731	AIR carboxylase
AK40_4484	PF02222	ATP-grasp domain
AK40_4484	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AK40_4485	PF00206	Lyase
AK40_4485	PF10397	Adenylosuccinate lyase C-terminus
AK40_4486	PF01259	SAICAR synthetase
AK40_4487	PF02700	Phosphoribosylformylglycinamidine (FGAM) synthase
AK40_4488	PF13507	CobB/CobQ-like glutamine amidotransferase domain
AK40_4489	PF00586	AIR synthase related protein, N-terminal domain
AK40_4489	PF02769	AIR synthase related protein, C-terminal domain
AK40_449	PF13228	AK40_449
AK40_4490	PF00156	Phosphoribosyl transferase domain
AK40_4490	PF13537	Glutamine amidotransferase domain
AK40_4491	PF00586	AIR synthase related protein, N-terminal domain
AK40_4491	PF02769	AIR synthase related protein, C-terminal domain
AK40_4492	PF00551	Formyl transferase
AK40_4493	PF01808	AICARFT/IMPCHase bienzyme
AK40_4493	PF02142	MGS-like domain
AK40_4494	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
AK40_4494	PF02843	Phosphoribosylglycinamide synthetase, C domain
AK40_4494	PF02844	Phosphoribosylglycinamide synthetase, N domain
AK40_4495	PF05534	AK40_4495
AK40_4496	PF01145	SPFH domain / Band 7 family
AK40_4497	PF11127	Protein of unknown function (DUF2892)
AK40_4498	PF01884	PcrB family
AK40_4499	PF00580	UvrD/REP helicase N-terminal domain
AK40_4499	PF13361	UvrD-like helicase C-terminal domain
AK40_45	PF01037	AsnC family
AK40_45	PF13412	Winged helix-turn-helix DNA-binding
AK40_450	PF01943	AK40_450
AK40_450	PF14667	Polysaccharide biosynthesis C-terminal domain
AK40_4500	PF00533	BRCA1 C Terminus (BRCT) domain
AK40_4500	PF01653	NAD-dependent DNA ligase adenylation domain
AK40_4500	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
AK40_4500	PF03120	NAD-dependent DNA ligase OB-fold domain
AK40_4500	PF12826	Helix-hairpin-helix motif
AK40_4500	PF14520	Helix-hairpin-helix domain
AK40_4501	PF07537	CamS sex pheromone cAM373 precursor
AK40_4502	PF01925	AK40_4502
AK40_4503	PF00171	Aldehyde dehydrogenase family
AK40_4505	PF00857	Isochorismatase family
AK40_4506	PF00005	ABC transporter
AK40_4506	PF09383	NIL domain
AK40_4507	PF00528	Binding-protein-dependent transport system inner membrane component
AK40_4508	PF03180	NLPA lipoprotein
AK40_4509	PF13787	AK40_4509
AK40_451	PF00209	Sodium:neurotransmitter symporter family
AK40_4510	PF13080	AK40_4510
AK40_4511	PF02374	Anion-transporting ATPase
AK40_4512	PF01047	MarR family
AK40_4513	PF05360	AK40_4513
AK40_4514	PF02686	Glu-tRNAGln amidotransferase C subunit
AK40_4515	PF01425	Amidase
AK40_4516	PF02637	GatB domain
AK40_4516	PF02934	GatB/GatE catalytic domain
AK40_4517	PF00781	Diacylglycerol kinase catalytic domain
AK40_4518	PF13419	Haloacid dehalogenase-like hydrolase
AK40_4519	PF00202	Aminotransferase class-III
AK40_452	PF01522	Polysaccharide deacetylase
AK40_4520	PF00158	Sigma-54 interaction domain
AK40_4520	PF13426	PAS domain
AK40_4521	PF00171	Aldehyde dehydrogenase family
AK40_4522	PF00893	Small Multidrug Resistance protein
AK40_4523	PF02073	Thermophilic metalloprotease (M29)
AK40_4524	PF01522	Polysaccharide deacetylase
AK40_4525	PF01522	Polysaccharide deacetylase
AK40_4526	PF01773	Na+ dependent nucleoside transporter N-terminus
AK40_4526	PF07662	Na+ dependent nucleoside transporter C-terminus
AK40_4527	PF01938	TRAM domain
AK40_4527	PF02475	Met-10+ like-protein
AK40_4527	PF05958	tRNA (Uracil-5-)-methyltransferase
AK40_4528	PF01207	Dihydrouridine synthase (Dus)
AK40_4529	PF00512	His Kinase A (phospho-acceptor) domain
AK40_4529	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_4529	PF08448	PAS fold
AK40_4529	PF13185	GAF domain
AK40_4530	PF07308	AK40_4530
AK40_4531	PF01863	Protein of unknown function DUF45
AK40_4533	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
AK40_4533	PF13378	Enolase C-terminal domain-like
AK40_4534	PF03553	AK40_4534
AK40_4536	PF01546	Peptidase family M20/M25/M40
AK40_4536	PF07687	Peptidase dimerisation domain
AK40_4537	PF13679	AK40_4537
AK40_4539	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AK40_4539	PF13192	Thioredoxin domain
AK40_454	PF04239	Protein of unknown function (DUF421)
AK40_4540	PF00578	AhpC/TSA family
AK40_4540	PF10417	C-terminal domain of 1-Cys peroxiredoxin
AK40_4541	PF01636	Phosphotransferase enzyme family
AK40_4542	PF01008	Initiation factor 2 subunit family
AK40_4543	PF00596	Class II Aldolase and Adducin N-terminal domain
AK40_4544	PF01032	FecCD transport family
AK40_4545	PF01032	FecCD transport family
AK40_4546	PF01497	Periplasmic binding protein
AK40_4547	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AK40_4549	PF12728	Helix-turn-helix domain
AK40_455	PF07299	Fibronectin-binding protein (FBP)
AK40_455	PF16571	AK40_455
AK40_4555	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_4557	PF04199	Putative cyclase
AK40_4559	PF10127	AK40_4559
AK40_456	PF13411	MerR HTH family regulatory protein
AK40_4560	PF07690	Major Facilitator Superfamily
AK40_4561	PF00355	Rieske [2Fe-2S] domain
AK40_4561	PF01266	FAD dependent oxidoreductase
AK40_4562	PF00487	AK40_4562
AK40_4563	PF00528	Binding-protein-dependent transport system inner membrane component
AK40_4564	PF00497	Bacterial extracellular solute-binding proteins, family 3
AK40_4565	PF00005	ABC transporter
AK40_4566	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AK40_4566	PF12729	AK40_4566
AK40_4567	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AK40_4567	PF00672	HAMP domain
AK40_4568	PF00128	Alpha amylase, catalytic domain
AK40_4568	PF16657	AK40_4568
AK40_4569	PF00367	phosphotransferase system, EIIB
AK40_4569	PF02378	Phosphotransferase system, EIIC
AK40_457	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AK40_4570	PF03372	Endonuclease/Exonuclease/phosphatase family
AK40_4571	PF12698	ABC-2 family transporter protein
AK40_4572	PF01131	DNA topoisomerase
AK40_4572	PF01751	Toprim domain
AK40_4573	PF02110	Hydroxyethylthiazole kinase family
AK40_4574	PF02581	Thiamine monophosphate synthase/TENI
AK40_4575	PF03605	AK40_4575
AK40_4576	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AK40_4577	PF01910	Domain of unknown function DUF77
AK40_4578	PF00528	Binding-protein-dependent transport system inner membrane component
AK40_4579	PF09084	NMT1/THI5 like
AK40_4580	PF00005	ABC transporter
AK40_4581	PF00005	ABC transporter
AK40_4581	PF12848	ABC transporter
AK40_4582	PF00041	Fibronectin type III domain
AK40_4582	PF00553	Cellulose binding domain
AK40_4582	PF00704	Glycosyl hydrolases family 18
AK40_4583	PF09350	AK40_4583
AK40_4588	PF00440	Bacterial regulatory proteins, tetR family
AK40_4588	PF08360	QacR-like protein, C-terminal region
AK40_4589	PF05977	Transmembrane secretion effector
AK40_4590	PF01381	Helix-turn-helix
AK40_4592	PF11700	AK40_4592
AK40_4593	PF01663	Type I phosphodiesterase / nucleotide pyrophosphatase
AK40_4594	PF14150	AK40_4594
AK40_4596	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
AK40_4596	PF03129	Anticodon binding domain
AK40_4596	PF09180	Prolyl-tRNA synthetase, C-terminal
AK40_4598	PF00480	ROK family
AK40_4599	PF02342	TerD domain
AK40_4600	PF02342	TerD domain
AK40_4601	PF02342	TerD domain
AK40_4602	PF03741	AK40_4602
AK40_4603	PF14266	AK40_4603
AK40_4604	PF05816	AK40_4604
AK40_4605	PF00122	E1-E2 ATPase
AK40_4605	PF00689	Cation transporting ATPase, C-terminus
AK40_4605	PF00690	Cation transporter/ATPase, N-terminus
AK40_4605	PF00702	haloacid dehalogenase-like hydrolase
AK40_4606	PF06569	AK40_4606
AK40_4607	PF01451	Low molecular weight phosphotyrosine protein phosphatase
AK40_4608	PF13294	AK40_4608
AK40_4609	PF03631	AK40_4609
AK40_461	PF01625	Peptide methionine sulfoxide reductase
AK40_4610	PF00122	E1-E2 ATPase
AK40_4610	PF00702	haloacid dehalogenase-like hydrolase
AK40_4611	PF00892	EamA-like transporter family
AK40_4612	PF07947	AK40_4612
AK40_4613	PF00717	Peptidase S24-like
AK40_4615	PF09335	AK40_4615
AK40_4616	PF00892	EamA-like transporter family
AK40_4618	PF16242	AK40_4618
AK40_4619	PF01699	Sodium/calcium exchanger protein
AK40_462	PF13561	Enoyl-(Acyl carrier protein) reductase
AK40_4620	PF14167	AK40_4620
AK40_4621	PF04055	Radical SAM superfamily
AK40_4621	PF08756	AK40_4621
AK40_4621	PF13353	4Fe-4S single cluster domain
AK40_4623	PF05681	AK40_4623
AK40_4623	PF05683	Fumarase C-terminus
AK40_4624	PF01522	Polysaccharide deacetylase
AK40_4625	PF00730	HhH-GPD superfamily base excision DNA repair protein
AK40_4626	PF01938	TRAM domain
AK40_4626	PF05958	tRNA (Uracil-5-)-methyltransferase
AK40_4627	PF01416	tRNA pseudouridine synthase
AK40_4629	PF00158	Sigma-54 interaction domain
AK40_4629	PF02954	Bacterial regulatory protein, Fis family
AK40_463	PF01063	Aminotransferase class IV
AK40_4630	PF00364	Biotin-requiring enzyme
AK40_4631	PF00324	Amino acid permease
AK40_4632	PF01546	Peptidase family M20/M25/M40
AK40_4632	PF07687	Peptidase dimerisation domain
AK40_4633	PF01381	Helix-turn-helix
AK40_4633	PF06803	AK40_4633
AK40_4634	PF02659	AK40_4634
AK40_4636	PF13108	AK40_4636
AK40_4637	PF04960	Glutaminase
AK40_4638	PF00367	phosphotransferase system, EIIB
AK40_4638	PF02378	Phosphotransferase system, EIIC
AK40_4639	PF00144	Beta-lactamase
AK40_464	PF00205	Thiamine pyrophosphate enzyme, central domain
AK40_464	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AK40_464	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AK40_4642	PF00535	Glycosyl transferase family 2
AK40_4643	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
AK40_4643	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
AK40_4643	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
AK40_4644	PF01370	NAD dependent epimerase/dehydratase family
AK40_4645	PF00535	Glycosyl transferase family 2
AK40_4646	PF01228	Glycine radical
AK40_4646	PF02901	Pyruvate formate lyase
AK40_4647	PF04055	Radical SAM superfamily
AK40_4647	PF13353	4Fe-4S single cluster domain
AK40_4648	PF04101	Glycosyltransferase family 28 C-terminal domain
AK40_4648	PF06925	AK40_4648
AK40_4649	PF14152	AK40_4649
AK40_465	PF13710	ACT domain
AK40_4650	PF13302	Acetyltransferase (GNAT) domain
AK40_4651	PF01979	Amidohydrolase family
AK40_4652	PF01370	NAD dependent epimerase/dehydratase family
AK40_4652	PF08338	Domain of unknown function (DUF1731)
AK40_4653	PF02631	RecX family
AK40_4654	PF08838	Protein of unknown function (DUF1811)
AK40_4655	PF14139	AK40_4655
AK40_4656	PF08176	AK40_4656
AK40_4657	PF14043	AK40_4657
AK40_4658	PF04307	AK40_4658
AK40_4659	PF00633	Helix-hairpin-helix motif
AK40_4659	PF00730	HhH-GPD superfamily base excision DNA repair protein
AK40_4659	PF14815	NUDIX domain
AK40_466	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
AK40_466	PF07991	Acetohydroxy acid isomeroreductase, catalytic domain
AK40_4661	PF04259	AK40_4661
AK40_4663	PF14182	AK40_4663
AK40_4664	PF04167	Protein of unknown function (DUF402)
AK40_4665	PF00005	ABC transporter
AK40_4665	PF00664	ABC transporter transmembrane region
AK40_4666	PF06081	AK40_4666
AK40_4667	PF00310	Glutamine amidotransferases class-II
AK40_4667	PF01493	GXGXG motif
AK40_4667	PF01645	Conserved region in glutamate synthase
AK40_4667	PF04898	Glutamate synthase central domain
AK40_4668	PF00202	Aminotransferase class-III
AK40_4669	PF00005	ABC transporter
AK40_467	PF00920	Dehydratase family
AK40_4670	PF06182	AK40_4670
AK40_4671	PF06182	AK40_4671
AK40_4672	PF07885	Ion channel
AK40_4673	PF00578	AhpC/TSA family
AK40_4674	PF01475	Ferric uptake regulator family
AK40_4675	PF11023	AK40_4675
AK40_468	PF00291	Pyridoxal-phosphate dependent enzyme
AK40_468	PF00585	C-terminal regulatory domain of Threonine dehydratase
AK40_4695	PF01709	Transcriptional regulator
AK40_4696	PF00293	NUDIX domain
AK40_47	PF00857	Isochorismatase family
AK40_470	PF09587	Bacterial capsule synthesis protein PGA_cap
AK40_4700	PF02624	YcaO-like family
AK40_4701	PF00881	Nitroreductase family
AK40_4702	PF00005	ABC transporter
AK40_4702	PF00664	ABC transporter transmembrane region
AK40_4703	PF14399	AK40_4703
AK40_4703	PF16169	AK40_4703
AK40_4705	PF00912	Transglycosylase
AK40_4706	PF13462	Thioredoxin
AK40_4709	PF08331	AK40_4709
AK40_4709	PF13484	AK40_4709
AK40_4709	PF13646	HEAT repeats
AK40_471	PF04474	AK40_471
AK40_4710	PF12671	AK40_4710
AK40_4711	PF00588	SpoU rRNA Methylase family
AK40_4712	PF00563	EAL domain
AK40_4712	PF00990	GGDEF domain
AK40_4712	PF08448	PAS fold
AK40_4714	PF06798	AK40_4714
AK40_4714	PF08298	PrkA AAA domain
AK40_4715	PF04285	AK40_4715
AK40_4716	PF05031	Iron Transport-associated domain
AK40_4716	PF12799	Leucine Rich repeats (2 copies)
AK40_4716	PF14580	Leucine-rich repeat
AK40_4719	PF00583	Acetyltransferase (GNAT) family
AK40_472	PF00583	Acetyltransferase (GNAT) family
AK40_4720	PF02028	BCCT family transporter
AK40_4721	PF00801	PKD domain
AK40_4721	PF01752	Collagenase
AK40_4721	PF04151	Bacterial pre-peptidase C-terminal domain
AK40_4721	PF08453	Peptidase family M9 N-terminal
AK40_4723	PF01145	SPFH domain / Band 7 family
AK40_4723	PF15975	AK40_4723
AK40_4724	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AK40_4724	PF00672	HAMP domain
AK40_4724	PF02743	Cache domain
AK40_4725	PF00989	PAS fold
AK40_4725	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_4725	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
AK40_4725	PF17203	AK40_4725
AK40_4726	PF00072	Response regulator receiver domain
AK40_4727	PF03600	Citrate transporter
AK40_4729	PF05573	NosL
AK40_473	PF00083	Sugar (and other) transporter
AK40_473	PF07690	Major Facilitator Superfamily
AK40_4730	PF12796	Ankyrin repeats (3 copies)
AK40_4731	PF00149	Calcineurin-like phosphoesterase
AK40_4732	PF00072	Response regulator receiver domain
AK40_4732	PF00486	Transcriptional regulatory protein, C terminal
AK40_4733	PF00512	His Kinase A (phospho-acceptor) domain
AK40_4733	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_4735	PF13529	Peptidase_C39 like family
AK40_4736	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AK40_4736	PF00672	HAMP domain
AK40_4736	PF02743	Cache domain
AK40_4737	PF00989	PAS fold
AK40_4737	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_4737	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
AK40_4737	PF17203	AK40_4737
AK40_4738	PF00072	Response regulator receiver domain
AK40_4739	PF03390	AK40_4739
AK40_474	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
AK40_4740	PF00390	Malic enzyme, N-terminal domain
AK40_4740	PF03949	Malic enzyme, NAD binding domain
AK40_4741	PF16167	AK40_4741
AK40_4742	PF00892	EamA-like transporter family
AK40_4743	PF00155	Aminotransferase class I and II
AK40_4743	PF00392	Bacterial regulatory proteins, gntR family
AK40_4744	PF00583	Acetyltransferase (GNAT) family
AK40_4745	PF00512	His Kinase A (phospho-acceptor) domain
AK40_4745	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_4746	PF00072	Response regulator receiver domain
AK40_4746	PF00486	Transcriptional regulatory protein, C terminal
AK40_4748	PF13420	Acetyltransferase (GNAT) domain
AK40_4749	PF02634	FdhD/NarQ family
AK40_475	PF12146	Putative lysophospholipase
AK40_4750	PF00384	Molybdopterin oxidoreductase
AK40_4750	PF01568	Molydopterin dinucleotide binding domain
AK40_4750	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
AK40_4750	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AK40_4750	PF12838	4Fe-4S dicluster domain
AK40_4750	PF13510	2Fe-2S iron-sulfur cluster binding domain
AK40_4751	PF07849	AK40_4751
AK40_4752	PF03009	Glycerophosphoryl diester phosphodiesterase family
AK40_4752	PF10110	AK40_4752
AK40_4753	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
AK40_4753	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
AK40_4754	PF13520	Amino acid permease
AK40_4755	PF01022	Bacterial regulatory protein, arsR family
AK40_4756	PF00122	E1-E2 ATPase
AK40_4756	PF00403	Heavy-metal-associated domain
AK40_4756	PF00702	haloacid dehalogenase-like hydrolase
AK40_4757	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
AK40_4758	PF01381	Helix-turn-helix
AK40_4759	PF13424	Tetratricopeptide repeat
AK40_476	PF00805	Pentapeptide repeats (8 copies)
AK40_4761	PF01447	Thermolysin metallopeptidase, catalytic domain
AK40_4761	PF02868	Thermolysin metallopeptidase, alpha-helical domain
AK40_4761	PF03413	Peptidase propeptide and YPEB domain
AK40_4761	PF07504	Fungalysin/Thermolysin Propeptide Motif
AK40_4762	PF09335	AK40_4762
AK40_4765	PF04294	AK40_4765
AK40_4765	PF12229	Putative peptidoglycan binding domain
AK40_4766	PF03816	Cell envelope-related transcriptional attenuator domain
AK40_4767	PF01773	Na+ dependent nucleoside transporter N-terminus
AK40_4767	PF07662	Na+ dependent nucleoside transporter C-terminus
AK40_4767	PF07670	Nucleoside recognition
AK40_4768	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AK40_4769	PF00571	CBS domain
AK40_4769	PF01595	AK40_4769
AK40_4769	PF03471	Transporter associated domain
AK40_477	PF00144	Beta-lactamase
AK40_4770	PF00206	Lyase
AK40_4770	PF10415	Fumarase C C-terminus
AK40_4771	PF02652	AK40_4771
AK40_4772	PF12840	Helix-turn-helix domain
AK40_4773	PF08141	AK40_4773
AK40_4774	PF00854	POT family
AK40_4775	PF01497	Periplasmic binding protein
AK40_4776	PF01032	FecCD transport family
AK40_4777	PF01032	FecCD transport family
AK40_4778	PF00005	ABC transporter
AK40_4779	PF00155	Aminotransferase class I and II
AK40_478	PF04397	LytTr DNA-binding domain
AK40_4780	PF01370	NAD dependent epimerase/dehydratase family
AK40_4781	PF00293	NUDIX domain
AK40_4782	PF00092	von Willebrand factor type A domain
AK40_4783	PF07728	AAA domain (dynein-related subfamily)
AK40_4784	PF13091	PLD-like domain
AK40_4784	PF13396	AK40_4784
AK40_4786	PF00563	EAL domain
AK40_4786	PF00990	GGDEF domain
AK40_4786	PF13426	PAS domain
AK40_4787	PF13520	Amino acid permease
AK40_4788	PF00392	Bacterial regulatory proteins, gntR family
AK40_4788	PF07702	UTRA domain
AK40_4789	PF00367	phosphotransferase system, EIIB
AK40_4789	PF02378	Phosphotransferase system, EIIC
AK40_479	PF02550	Acetyl-CoA hydrolase/transferase N-terminal domain
AK40_479	PF13336	Acetyl-CoA hydrolase/transferase C-terminal domain
AK40_4790	PF00128	Alpha amylase, catalytic domain
AK40_4790	PF16657	AK40_4790
AK40_4791	PF05504	Spore germination B3/ GerAC like, C-terminal
AK40_4792	PF03845	AK40_4792
AK40_4793	PF03323	AK40_4793
AK40_4794	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_4794	PF07730	Histidine kinase
AK40_4795	PF00072	Response regulator receiver domain
AK40_4795	PF00196	Bacterial regulatory proteins, luxR family
AK40_4796	PF00082	Subtilase family
AK40_4796	PF00963	Cohesin domain
AK40_4796	PF02225	PA domain
AK40_4796	PF05922	Peptidase inhibitor I9
AK40_4797	PF12389	AK40_4797
AK40_4798	PF02517	CAAX protease self-immunity
AK40_4799	PF01636	Phosphotransferase enzyme family
AK40_48	PF07179	AK40_48
AK40_480	PF13673	Acetyltransferase (GNAT) domain
AK40_4800	PF01235	AK40_4800
AK40_4801	PF00005	ABC transporter
AK40_4802	PF00497	Bacterial extracellular solute-binding proteins, family 3
AK40_4803	PF00528	Binding-protein-dependent transport system inner membrane component
AK40_4804	PF00528	Binding-protein-dependent transport system inner membrane component
AK40_4805	PF00324	Amino acid permease
AK40_4806	PF02566	OsmC-like protein
AK40_4807	PF01230	HIT domain
AK40_4808	PF04542	Sigma-70 region 2
AK40_4808	PF08281	Sigma-70, region 4
AK40_4809	PF14285	AK40_4809
AK40_4810	PF08279	HTH domain
AK40_4810	PF13280	AK40_4810
AK40_4811	PF01872	RibD C-terminal domain
AK40_4812	PF00512	His Kinase A (phospho-acceptor) domain
AK40_4812	PF00672	HAMP domain
AK40_4812	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_4813	PF00072	Response regulator receiver domain
AK40_4813	PF00486	Transcriptional regulatory protein, C terminal
AK40_4815	PF00916	AK40_4815
AK40_4815	PF01740	STAS domain
AK40_4816	PF00582	Universal stress protein family
AK40_4817	PF13219	AK40_4817
AK40_4818	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AK40_4819	PF00528	Binding-protein-dependent transport system inner membrane component
AK40_4819	PF12911	AK40_4819
AK40_482	PF01979	Amidohydrolase family
AK40_4820	PF00528	Binding-protein-dependent transport system inner membrane component
AK40_4821	PF00005	ABC transporter
AK40_4821	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AK40_4822	PF00005	ABC transporter
AK40_4822	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AK40_4823	PF07690	Major Facilitator Superfamily
AK40_4824	PF01047	MarR family
AK40_4825	PF07690	Major Facilitator Superfamily
AK40_4826	PF00356	Bacterial regulatory proteins, lacI family
AK40_4826	PF13377	Periplasmic binding protein-like domain
AK40_4827	PF00294	pfkB family carbohydrate kinase
AK40_4828	PF05025	RbsD / FucU transport protein family
AK40_4829	PF00005	ABC transporter
AK40_483	PF12639	DNase/tRNase domain of colicin-like bacteriocin
AK40_4830	PF02653	AK40_4830
AK40_4831	PF13407	Periplasmic binding protein domain
AK40_4832	PF00923	Transaldolase
AK40_4833	PF05547	AK40_4833
AK40_4834	PF03209	AK40_4834
AK40_4834	PF07690	Major Facilitator Superfamily
AK40_4835	PF00107	Zinc-binding dehydrogenase
AK40_4835	PF08240	Alcohol dehydrogenase GroES-like domain
AK40_4835	PF13823	Alcohol dehydrogenase GroES-associated
AK40_4836	PF07885	Ion channel
AK40_4837	PF00882	Zinc dependent phospholipase C
AK40_4838	PF03372	Endonuclease/Exonuclease/phosphatase family
AK40_4839	PF01168	Alanine racemase, N-terminal domain
AK40_484	PF14568	SMI1-KNR4 cell-wall
AK40_4840	PF01565	FAD binding domain
AK40_4840	PF04030	D-arabinono-1,4-lactone oxidase
AK40_4841	PF04892	AK40_4841
AK40_4841	PF06271	AK40_4841
AK40_4843	PF02673	AK40_4843
AK40_4844	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AK40_4845	PF06725	3D domain
AK40_4846	PF01381	Helix-turn-helix
AK40_4848	PF04203	Sortase family
AK40_4849	PF00854	POT family
AK40_485	PF12870	Lumazine-binding domain
AK40_4851	PF05525	AK40_4851
AK40_4852	PF10101	AK40_4852
AK40_4854	PF00324	Amino acid permease
AK40_4855	PF00860	Permease family
AK40_4856	PF01381	Helix-turn-helix
AK40_4858	PF00583	Acetyltransferase (GNAT) family
AK40_4859	PF13214	AK40_4859
AK40_486	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AK40_4860	PF00999	Sodium/hydrogen exchanger family
AK40_4860	PF02080	TrkA-C domain
AK40_4860	PF02254	TrkA-N domain
AK40_4861	PF03626	AK40_4861
AK40_4862	PF00510	Cytochrome c oxidase subunit III
AK40_4863	PF00115	Cytochrome C and Quinol oxidase polypeptide I
AK40_4864	PF02790	Cytochrome C oxidase subunit II, transmembrane domain
AK40_4865	PF13529	Peptidase_C39 like family
AK40_4866	PF01546	Peptidase family M20/M25/M40
AK40_4866	PF07687	Peptidase dimerisation domain
AK40_4867	PF11755	AK40_4867
AK40_4868	PF00474	Sodium:solute symporter family
AK40_4869	PF03323	AK40_4869
AK40_4870	PF03845	AK40_4870
AK40_4871	PF05504	Spore germination B3/ GerAC like, C-terminal
AK40_4872	PF07664	AK40_4872
AK40_4872	PF07670	Nucleoside recognition
AK40_4873	PF02421	Ferrous iron transport protein B
AK40_4874	PF04023	FeoA domain
AK40_4875	PF12849	PBP superfamily domain
AK40_4876	PF00528	Binding-protein-dependent transport system inner membrane component
AK40_4877	PF00528	Binding-protein-dependent transport system inner membrane component
AK40_4878	PF13671	AAA domain
AK40_4879	PF00873	AcrB/AcrD/AcrF family
AK40_489	PF08242	Methyltransferase domain
AK40_49	PF02016	LD-carboxypeptidase
AK40_490	PF04055	Radical SAM superfamily
AK40_490	PF13186	Iron-sulfur cluster-binding domain
AK40_490	PF13353	4Fe-4S single cluster domain
AK40_4904	PF00571	CBS domain
AK40_4905	PF13112	AK40_4905
AK40_4905	PF13142	AK40_4905
AK40_4907	PF01551	Peptidase family M23
AK40_4907	PF08239	Bacterial SH3 domain
AK40_4908	PF03070	TENA/THI-4/PQQC family
AK40_4909	PF00005	ABC transporter
AK40_491	PF13302	Acetyltransferase (GNAT) domain
AK40_4910	PF00528	Binding-protein-dependent transport system inner membrane component
AK40_4911	PF09084	NMT1/THI5 like
AK40_4912	PF02581	Thiamine monophosphate synthase/TENI
AK40_4913	PF01266	FAD dependent oxidoreductase
AK40_4914	PF02597	ThiS family
AK40_4915	PF05690	Thiazole biosynthesis protein ThiG
AK40_4916	PF00899	ThiF family
AK40_4917	PF08543	Phosphomethylpyrimidine kinase
AK40_492	PF00072	Response regulator receiver domain
AK40_492	PF00486	Transcriptional regulatory protein, C terminal
AK40_4921	PF03814	AK40_4921
AK40_4922	PF00122	E1-E2 ATPase
AK40_4922	PF00702	haloacid dehalogenase-like hydrolase
AK40_4923	PF02669	AK40_4923
AK40_4924	PF00582	Universal stress protein family
AK40_4924	PF02702	Osmosensitive K+ channel His kinase sensor domain
AK40_4925	PF07690	Major Facilitator Superfamily
AK40_4926	PF01047	MarR family
AK40_4927	PF01734	Patatin-like phospholipase
AK40_4929	PF02687	AK40_4929
AK40_493	PF00512	His Kinase A (phospho-acceptor) domain
AK40_493	PF00672	HAMP domain
AK40_493	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_4930	PF12704	MacB-like periplasmic core domain
AK40_4931	PF00005	ABC transporter
AK40_4933	PF00860	Permease family
AK40_4934	PF13561	Enoyl-(Acyl carrier protein) reductase
AK40_4935	PF03734	L,D-transpeptidase catalytic domain
AK40_4937	PF00294	pfkB family carbohydrate kinase
AK40_4938	PF00251	Glycosyl hydrolases family 32 N-terminal domain
AK40_4938	PF08244	Glycosyl hydrolases family 32 C terminal
AK40_4939	PF00367	phosphotransferase system, EIIB
AK40_4939	PF02378	Phosphotransferase system, EIIC
AK40_494	PF01551	Peptidase family M23
AK40_4940	PF00356	Bacterial regulatory proteins, lacI family
AK40_4940	PF13377	Periplasmic binding protein-like domain
AK40_4941	PF07561	AK40_4941
AK40_4942	PF00085	Thioredoxin
AK40_4943	PF02600	Disulfide bond formation protein DsbB
AK40_4944	PF14148	AK40_4944
AK40_4945	PF13798	AK40_4945
AK40_4946	PF03845	AK40_4946
AK40_4947	PF05504	Spore germination B3/ GerAC like, C-terminal
AK40_4948	PF03323	AK40_4948
AK40_4950	PF00881	Nitroreductase family
AK40_4951	PF04293	AK40_4951
AK40_4952	PF00581	Rhodanese-like domain
AK40_4952	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AK40_4952	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AK40_4953	PF02583	Metal-sensitive transcriptional repressor
AK40_4954	PF00581	Rhodanese-like domain
AK40_4954	PF01206	Sulfurtransferase TusA
AK40_4955	PF00581	Rhodanese-like domain
AK40_4955	PF00753	Metallo-beta-lactamase superfamily
AK40_4956	PF01206	Sulfurtransferase TusA
AK40_4957	PF00581	Rhodanese-like domain
AK40_4958	PF00581	Rhodanese-like domain
AK40_4959	PF13686	DsrE/DsrF/DrsH-like family
AK40_4960	PF01925	AK40_4960
AK40_4962	PF03816	Cell envelope-related transcriptional attenuator domain
AK40_4963	PF00107	Zinc-binding dehydrogenase
AK40_4963	PF08240	Alcohol dehydrogenase GroES-like domain
AK40_4964	PF01895	PhoU domain
AK40_4964	PF02690	AK40_4964
AK40_4965	PF03209	AK40_4965
AK40_4965	PF07690	Major Facilitator Superfamily
AK40_4966	PF05913	Bacterial protein of unknown function (DUF871)
AK40_4967	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AK40_4967	PF00874	PRD domain
AK40_4967	PF05043	Mga helix-turn-helix domain
AK40_4967	PF08279	HTH domain
AK40_4968	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
AK40_4969	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AK40_497	PF01566	AK40_497
AK40_4970	PF02378	Phosphotransferase system, EIIC
AK40_4972	PF05913	Bacterial protein of unknown function (DUF871)
AK40_4973	PF06725	3D domain
AK40_4973	PF08239	Bacterial SH3 domain
AK40_4974	PF02687	AK40_4974
AK40_4974	PF12704	MacB-like periplasmic core domain
AK40_4975	PF00005	ABC transporter
AK40_4976	PF16576	AK40_4976
AK40_4977	PF09529	AK40_4977
AK40_4978	PF00528	Binding-protein-dependent transport system inner membrane component
AK40_4979	PF00528	Binding-protein-dependent transport system inner membrane component
AK40_498	PF00581	Rhodanese-like domain
AK40_498	PF12368	AK40_498
AK40_4980	PF02687	AK40_4980
AK40_4981	PF05525	AK40_4981
AK40_4982	PF05067	Manganese containing catalase
AK40_4983	PF12652	AK40_4983
AK40_4984	PF11007	AK40_4984
AK40_4985	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AK40_4986	PF11155	Domain of unknown function (DUF2935)
AK40_4987	PF02735	Ku70/Ku80 beta-barrel domain
AK40_4988	PF06803	AK40_4988
AK40_4989	PF09335	AK40_4989
AK40_4990	PF13157	AK40_4990
AK40_4991	PF13157	AK40_4991
AK40_4992	PF13157	AK40_4992
AK40_4993	PF00149	Calcineurin-like phosphoesterase
AK40_4993	PF13385	Concanavalin A-like lectin/glucanases superfamily
AK40_4996	PF13520	Amino acid permease
AK40_4997	PF00999	Sodium/hydrogen exchanger family
AK40_4999	PF01380	SIS domain
AK40_4999	PF01418	Helix-turn-helix domain, rpiR family
AK40_5	PF00005	ABC transporter
AK40_5	PF08402	TOBE domain
AK40_50	PF03060	Nitronate monooxygenase
AK40_500	PF02558	Ketopantoate reductase PanE/ApbA
AK40_500	PF08546	Ketopantoate reductase PanE/ApbA C terminal
AK40_5000	PF13580	SIS domain
AK40_5001	PF00367	phosphotransferase system, EIIB
AK40_5001	PF02378	Phosphotransferase system, EIIC
AK40_5002	PF01385	AK40_5002
AK40_5002	PF07282	AK40_5002
AK40_5003	PF05913	Bacterial protein of unknown function (DUF871)
AK40_5004	PF07681	AK40_5004
AK40_5005	PF12680	SnoaL-like domain
AK40_5007	PF00892	EamA-like transporter family
AK40_5008	PF01037	AsnC family
AK40_5008	PF13412	Winged helix-turn-helix DNA-binding
AK40_5009	PF00583	Acetyltransferase (GNAT) family
AK40_5010	PF00893	Small Multidrug Resistance protein
AK40_5011	PF00893	Small Multidrug Resistance protein
AK40_5012	PF00440	Bacterial regulatory proteins, tetR family
AK40_5013	PF07690	Major Facilitator Superfamily
AK40_5015	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AK40_5015	PF12793	AK40_5015
AK40_5016	PF07690	Major Facilitator Superfamily
AK40_5018	PF01965	DJ-1/PfpI family
AK40_5019	PF00199	Catalase
AK40_5019	PF06628	Catalase-related immune-responsive
AK40_502	PF13520	Amino acid permease
AK40_5020	PF05975	AK40_5020
AK40_5021	PF13520	Amino acid permease
AK40_5023	PF12294	AK40_5023
AK40_5024	PF00171	Aldehyde dehydrogenase family
AK40_5025	PF00005	ABC transporter
AK40_5025	PF00664	ABC transporter transmembrane region
AK40_5026	PF00005	ABC transporter
AK40_5026	PF00664	ABC transporter transmembrane region
AK40_5027	PF00497	Bacterial extracellular solute-binding proteins, family 3
AK40_5028	PF00528	Binding-protein-dependent transport system inner membrane component
AK40_5029	PF00005	ABC transporter
AK40_503	PF05791	Bacillus haemolytic enterotoxin (HBL)
AK40_5030	PF00269	Small, acid-soluble spore proteins, alpha/beta type
AK40_5032	PF14398	AK40_5032
AK40_5034	PF04286	AK40_5034
AK40_5035	PF06133	Protein of unknown function (DUF964)
AK40_5037	PF08006	AK40_5037
AK40_5038	PF00205	Thiamine pyrophosphate enzyme, central domain
AK40_5038	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AK40_5038	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AK40_5039	PF03306	Alpha-acetolactate decarboxylase
AK40_504	PF05791	Bacillus haemolytic enterotoxin (HBL)
AK40_5040	PF02245	Methylpurine-DNA glycosylase (MPG)
AK40_5041	PF08282	haloacid dehalogenase-like hydrolase
AK40_5043	PF00395	S-layer homology domain
AK40_5043	PF01510	N-acetylmuramoyl-L-alanine amidase
AK40_5044	PF04055	Radical SAM superfamily
AK40_5045	PF00501	AMP-binding enzyme
AK40_5045	PF13193	AMP-binding enzyme C-terminal domain
AK40_5047	PF00916	AK40_5047
AK40_5047	PF01740	STAS domain
AK40_505	PF05791	Bacillus haemolytic enterotoxin (HBL)
AK40_5052	PF01043	SecA preprotein cross-linking domain
AK40_5052	PF07516	SecA Wing and Scaffold domain
AK40_5052	PF07517	SecA DEAD-like domain
AK40_5053	PF01943	AK40_5053
AK40_5053	PF14667	Polysaccharide biosynthesis C-terminal domain
AK40_5054	PF04230	AK40_5054
AK40_5055	PF00395	S-layer homology domain
AK40_5056	PF00395	S-layer homology domain
AK40_5057	PF14286	DHHW protein
AK40_5058	PF03062	AK40_5058
AK40_5059	PF13425	AK40_5059
AK40_506	PF01810	AK40_506
AK40_5060	PF00378	Enoyl-CoA hydratase/isomerase family
AK40_5065	PF05343	M42 glutamyl aminopeptidase
AK40_5066	PF00395	S-layer homology domain
AK40_5066	PF01520	N-acetylmuramoyl-L-alanine amidase
AK40_5067	PF01170	Putative RNA methylase family UPF0020
AK40_5068	PF01522	Polysaccharide deacetylase
AK40_5069	PF06445	GyrI-like small molecule binding domain
AK40_5069	PF12833	Helix-turn-helix domain
AK40_507	PF00005	ABC transporter
AK40_5070	PF11208	AK40_5070
AK40_5072	PF00589	Phage integrase family
AK40_5075	PF11121	AK40_5075
AK40_5076	PF05544	Proline racemase
AK40_5077	PF02423	Ornithine cyclodeaminase/mu-crystallin family
AK40_508	PF12730	AK40_508
AK40_5082	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AK40_5083	PF00528	Binding-protein-dependent transport system inner membrane component
AK40_5084	PF00528	Binding-protein-dependent transport system inner membrane component
AK40_5084	PF12911	AK40_5084
AK40_5085	PF00005	ABC transporter
AK40_5085	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AK40_5086	PF00005	ABC transporter
AK40_5086	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AK40_5087	PF13280	AK40_5087
AK40_5088	PF00350	Dynamin family
AK40_509	PF12730	AK40_509
AK40_5090	PF00350	Dynamin family
AK40_5092	PF01935	Domain of unknown function DUF87
AK40_5093	PF14411	AK40_5093
AK40_5094	PF14567	SMI1-KNR4 cell-wall
AK40_5096	PF00083	Sugar (and other) transporter
AK40_5096	PF07690	Major Facilitator Superfamily
AK40_5097	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_5097	PF13188	PAS domain
AK40_5097	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
AK40_5097	PF17203	AK40_5097
AK40_5098	PF00072	Response regulator receiver domain
AK40_5099	PF03401	Tripartite tricarboxylate transporter family receptor
AK40_51	PF04914	DltD C-terminal region
AK40_510	PF06486	Protein of unknown function (DUF1093)
AK40_5100	PF14281	AK40_5100
AK40_5102	PF08279	HTH domain
AK40_5102	PF13280	AK40_5102
AK40_5103	PF00271	Helicase conserved C-terminal domain
AK40_5104	PF09369	AK40_5104
AK40_5107	PF01555	DNA methylase
AK40_5108	PF08665	AK40_5108
AK40_511	PF00072	Response regulator receiver domain
AK40_511	PF00486	Transcriptional regulatory protein, C terminal
AK40_5110	PF00176	SNF2 family N-terminal domain
AK40_5110	PF00271	Helicase conserved C-terminal domain
AK40_5113	PF09983	AK40_5113
AK40_5117	PF04221	RelB antitoxin
AK40_5119	PF13411	MerR HTH family regulatory protein
AK40_512	PF00512	His Kinase A (phospho-acceptor) domain
AK40_512	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_5121	PF07261	Replication initiation and membrane attachment
AK40_5122	PF00772	DnaB-like helicase N terminal domain
AK40_5122	PF03796	DnaB-like helicase C terminal domain
AK40_5124	PF01978	Sugar-specific transcriptional regulator TrmB
AK40_5124	PF11495	Archaeal transcriptional regulator TrmB
AK40_5125	PF01925	AK40_5125
AK40_5127	PF00440	Bacterial regulatory proteins, tetR family
AK40_5128	PF07690	Major Facilitator Superfamily
AK40_5129	PF03773	AK40_5129
AK40_513	PF04198	Putative sugar-binding domain
AK40_513	PF04545	Sigma-70, region 4
AK40_5131	PF03551	Transcriptional regulator PadR-like family
AK40_5133	PF01764	Lipase (class 3)
AK40_5135	PF09680	AK40_5135
AK40_5137	PF03403	Platelet-activating factor acetylhydrolase, isoform II
AK40_5139	PF07336	Protein of unknown function (DUF1470)
AK40_5139	PF11706	CGNR zinc finger
AK40_514	PF01791	DeoC/LacD family aldolase
AK40_5140	PF04982	AK40_5140
AK40_5141	PF07993	Male sterility protein
AK40_5141	PF12697	Alpha/beta hydrolase family
AK40_5142	PF00440	Bacterial regulatory proteins, tetR family
AK40_5142	PF16925	AK40_5142
AK40_5143	PF14157	YmzC-like protein
AK40_5144	PF12802	MarR family
AK40_5145	PF01066	CDP-alcohol phosphatidyltransferase
AK40_5146	PF03899	AK40_5146
AK40_5148	PF04892	AK40_5148
AK40_515	PF01773	Na+ dependent nucleoside transporter N-terminus
AK40_515	PF07662	Na+ dependent nucleoside transporter C-terminus
AK40_5150	PF10067	AK40_5150
AK40_5151	PF02733	Dak1 domain
AK40_5152	PF00440	Bacterial regulatory proteins, tetR family
AK40_5152	PF14278	AK40_5152
AK40_5153	PF02733	Dak1 domain
AK40_5153	PF02734	DAK2 domain
AK40_5154	PF02525	Flavodoxin-like fold
AK40_5155	PF02082	Transcriptional regulator
AK40_5156	PF02734	DAK2 domain
AK40_5157	PF08239	Bacterial SH3 domain
AK40_516	PF00591	Glycosyl transferase family, a/b domain
AK40_516	PF02885	Glycosyl transferase family, helical bundle domain
AK40_516	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
AK40_5160	PF01966	HD domain
AK40_5164	PF00395	S-layer homology domain
AK40_5164	PF01841	Transglutaminase-like superfamily
AK40_5165	PF03551	Transcriptional regulator PadR-like family
AK40_5166	PF11193	AK40_5166
AK40_5167	PF11391	AK40_5167
AK40_5169	PF11181	AK40_5169
AK40_517	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
AK40_5170	PF05532	CsbD-like
AK40_5171	PF04226	AK40_5171
AK40_5173	PF01740	STAS domain
AK40_5174	PF13581	Histidine kinase-like ATPase domain
AK40_5175	PF04539	Sigma-70 region 3
AK40_5175	PF04542	Sigma-70 region 2
AK40_5175	PF04545	Sigma-70, region 4
AK40_5176	PF00210	Ferritin-like domain
AK40_5177	PF00072	Response regulator receiver domain
AK40_5177	PF07228	Stage II sporulation protein E (SpoIIE)
AK40_5178	PF01739	CheR methyltransferase, SAM binding domain
AK40_5178	PF03705	CheR methyltransferase, all-alpha domain
AK40_5179	PF00072	Response regulator receiver domain
AK40_5179	PF00512	His Kinase A (phospho-acceptor) domain
AK40_5179	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_5179	PF05227	CHASE3 domain
AK40_5179	PF13185	GAF domain
AK40_518	PF05979	Bacterial protein of unknown function (DUF896)
AK40_5182	PF11181	AK40_5182
AK40_5183	PF13220	AK40_5183
AK40_5184	PF01906	Putative heavy-metal-binding
AK40_5186	PF00107	Zinc-binding dehydrogenase
AK40_5186	PF08240	Alcohol dehydrogenase GroES-like domain
AK40_5187	PF11611	Domain of unknown function (DUF4352)
AK40_5189	PF11121	AK40_5189
AK40_519	PF13386	AK40_519
AK40_5191	PF14120	AK40_5191
AK40_5192	PF00149	Calcineurin-like phosphoesterase
AK40_5193	PF13514	AAA domain
AK40_5194	PF01336	OB-fold nucleic acid binding domain
AK40_5194	PF01966	HD domain
AK40_5195	PF06013	Proteins of 100 residues with WXG
AK40_5195	PF14449	AK40_5195
AK40_5195	PF15657	AK40_5195
AK40_5199	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AK40_52	PF00550	Phosphopantetheine attachment site
AK40_5200	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AK40_5203	PF00561	alpha/beta hydrolase fold
AK40_5204	PF14147	AK40_5204
AK40_5205	PF11155	Domain of unknown function (DUF2935)
AK40_5206	PF01381	Helix-turn-helix
AK40_5207	PF04309	Glycerol-3-phosphate responsive antiterminator
AK40_5208	PF00230	Major intrinsic protein
AK40_5209	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
AK40_5209	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
AK40_5210	PF01266	FAD dependent oxidoreductase
AK40_5210	PF16901	AK40_5210
AK40_5212	PF10049	AK40_5212
AK40_5214	PF11518	Protein of unknown function (DUF3221)
AK40_5215	PF04542	Sigma-70 region 2
AK40_5215	PF08281	Sigma-70, region 4
AK40_5216	PF03551	Transcriptional regulator PadR-like family
AK40_5217	PF01098	AK40_5217
AK40_5218	PF01047	MarR family
AK40_5219	PF13564	AK40_5219
AK40_522	PF00557	Metallopeptidase family M24
AK40_522	PF05195	Aminopeptidase P, N-terminal domain
AK40_5220	PF07690	Major Facilitator Superfamily
AK40_5221	PF07690	Major Facilitator Superfamily
AK40_5223	PF00580	UvrD/REP helicase N-terminal domain
AK40_5223	PF13361	UvrD-like helicase C-terminal domain
AK40_5223	PF13538	UvrD-like helicase C-terminal domain
AK40_5224	PF13616	PPIC-type PPIASE domain
AK40_5226	PF08963	Protein of unknown function (DUF1878)
AK40_5227	PF01047	MarR family
AK40_5228	PF12732	AK40_5228
AK40_5229	PF01230	HIT domain
AK40_523	PF00394	Multicopper oxidase
AK40_523	PF07731	Multicopper oxidase
AK40_523	PF07732	Multicopper oxidase
AK40_5230	PF00005	ABC transporter
AK40_5231	PF05975	AK40_5231
AK40_5232	PF12787	AK40_5232
AK40_5233	PF09680	AK40_5233
AK40_5234	PF00440	Bacterial regulatory proteins, tetR family
AK40_5236	PF03703	AK40_5236
AK40_5237	PF03703	AK40_5237
AK40_5239	PF14206	AK40_5239
AK40_524	PF01551	Peptidase family M23
AK40_524	PF08239	Bacterial SH3 domain
AK40_5241	PF00440	Bacterial regulatory proteins, tetR family
AK40_5242	PF05737	Collagen binding domain
AK40_5242	PF11766	Cell-wall agglutinin N-terminal ligand-sugar binding
AK40_5245	PF03703	AK40_5245
AK40_5246	PF03703	AK40_5246
AK40_5247	PF03992	Antibiotic biosynthesis monooxygenase
AK40_5248	PF00905	Penicillin binding protein transpeptidase domain
AK40_5248	PF00912	Transglycosylase
AK40_5249	PF01208	Uroporphyrinogen decarboxylase (URO-D)
AK40_5250	PF00762	Ferrochelatase
AK40_5251	PF01593	Flavin containing amine oxidoreductase
AK40_5252	PF10077	AK40_5252
AK40_5252	PF13218	AK40_5252
AK40_5253	PF03372	Endonuclease/Exonuclease/phosphatase family
AK40_5253	PF13290	AK40_5253
AK40_5257	PF03965	Penicillinase repressor
AK40_5258	PF05569	BlaR1 peptidase M56
AK40_5259	PF00440	Bacterial regulatory proteins, tetR family
AK40_526	PF01131	DNA topoisomerase
AK40_526	PF01751	Toprim domain
AK40_526	PF13342	AK40_526
AK40_5260	PF12698	ABC-2 family transporter protein
AK40_5262	PF09860	AK40_5262
AK40_5263	PF00583	Acetyltransferase (GNAT) family
AK40_5264	PF00356	Bacterial regulatory proteins, lacI family
AK40_5264	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
AK40_5265	PF14149	AK40_5265
AK40_5266	PF12706	Beta-lactamase superfamily domain
AK40_5267	PF03099	Biotin/lipoate A/B protein ligase family
AK40_5267	PF10437	Bacterial lipoate protein ligase C-terminus
AK40_5269	PF00501	AMP-binding enzyme
AK40_5269	PF13193	AMP-binding enzyme C-terminal domain
AK40_527	PF13687	AK40_527
AK40_5271	PF00395	S-layer homology domain
AK40_5271	PF05031	Iron Transport-associated domain
AK40_5272	PF05593	AK40_5272
AK40_5277	PF09346	SMI1 / KNR4 family (SUKH-1)
AK40_528	PF01758	Sodium Bile acid symporter family
AK40_5280	PF00440	Bacterial regulatory proteins, tetR family
AK40_5280	PF14278	AK40_5280
AK40_5281	PF12146	Putative lysophospholipase
AK40_5282	PF00149	Calcineurin-like phosphoesterase
AK40_5283	PF17428	AK40_5283
AK40_5284	PF01966	HD domain
AK40_5285	PF13490	Putative zinc-finger
AK40_5285	PF13791	AK40_5285
AK40_5285	PF13800	AK40_5285
AK40_5286	PF04542	Sigma-70 region 2
AK40_5286	PF08281	Sigma-70, region 4
AK40_5287	PF12833	Helix-turn-helix domain
AK40_5287	PF14526	Integron-associated effector binding protein
AK40_5288	PF00512	His Kinase A (phospho-acceptor) domain
AK40_5288	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_5289	PF00072	Response regulator receiver domain
AK40_5289	PF00486	Transcriptional regulatory protein, C terminal
AK40_529	PF02525	Flavodoxin-like fold
AK40_5290	PF02517	CAAX protease self-immunity
AK40_5291	PF09874	AK40_5291
AK40_5293	PF01435	Peptidase family M48
AK40_5293	PF16491	AK40_5293
AK40_5294	PF00892	EamA-like transporter family
AK40_5295	PF00395	S-layer homology domain
AK40_5296	PF00395	S-layer homology domain
AK40_5297	PF00395	S-layer homology domain
AK40_5298	PF01274	Malate synthase
AK40_5299	PF00463	Isocitrate lyase family
AK40_53	PF03062	AK40_53
AK40_530	PF05525	AK40_530
AK40_5300	PF01636	Phosphotransferase enzyme family
AK40_5301	PF00313	'Cold-shock' DNA-binding domain
AK40_5304	PF06338	AK40_5304
AK40_5306	PF09335	AK40_5306
AK40_5307	PF00717	Peptidase S24-like
AK40_5308	PF12705	PD-(D/E)XK nuclease superfamily
AK40_5308	PF13361	UvrD-like helicase C-terminal domain
AK40_5309	PF00580	UvrD/REP helicase N-terminal domain
AK40_5309	PF12705	PD-(D/E)XK nuclease superfamily
AK40_5309	PF13361	UvrD-like helicase C-terminal domain
AK40_531	PF13669	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AK40_5310	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
AK40_5311	PF10676	AK40_5311
AK40_5312	PF10970	AK40_5312
AK40_5314	PF10737	AK40_5314
AK40_5315	PF10803	AK40_5315
AK40_5316	PF10676	AK40_5316
AK40_5317	PF09388	Spo0E like sporulation regulatory protein
AK40_5318	PF01557	Fumarylacetoacetate (FAA) hydrolase family
AK40_532	PF04234	CopC domain
AK40_532	PF05425	AK40_532
AK40_532	PF13115	AK40_532
AK40_5320	PF00202	Aminotransferase class-III
AK40_5321	PF07457	AK40_5321
AK40_5322	PF10949	AK40_5322
AK40_5323	PF00733	Asparagine synthase
AK40_5323	PF13537	Glutamine amidotransferase domain
AK40_5324	PF00762	Ferrochelatase
AK40_5325	PF00199	Catalase
AK40_5325	PF06628	Catalase-related immune-responsive
AK40_5326	PF00909	Ammonium Transporter Family
AK40_5327	PF00128	Alpha amylase, catalytic domain
AK40_5328	PF12844	Helix-turn-helix domain
AK40_5329	PF04461	Protein of unknown function (DUF520)
AK40_533	PF07987	Domain of unkown function (DUF1775)
AK40_5330	PF13509	S1 domain
AK40_5332	PF13616	PPIC-type PPIASE domain
AK40_5333	PF13081	AK40_5333
AK40_5334	PF02588	AK40_5334
AK40_5334	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
AK40_5335	PF12758	AK40_5335
AK40_5337	PF08282	haloacid dehalogenase-like hydrolase
AK40_5338	PF14168	AK40_5338
AK40_5339	PF00004	ATPase family associated with various cellular activities (AAA)
AK40_5339	PF02861	Clp amino terminal domain
AK40_5339	PF07724	AAA domain (Cdc48 subfamily)
AK40_5339	PF10431	C-terminal, D2-small domain, of ClpB protein
AK40_534	PF00561	alpha/beta hydrolase fold
AK40_5340	PF11151	AK40_5340
AK40_5342	PF01370	NAD dependent epimerase/dehydratase family
AK40_5343	PF10815	AK40_5343
AK40_5344	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
AK40_5344	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
AK40_5345	PF00109	Beta-ketoacyl synthase, N-terminal domain
AK40_5345	PF02801	Beta-ketoacyl synthase, C-terminal domain
AK40_5346	PF10026	AK40_5346
AK40_5347	PF12227	AK40_5347
AK40_5348	PF00579	tRNA synthetases class I (W and Y)
AK40_5349	PF13038	AK40_5349
AK40_535	PF00892	EamA-like transporter family
AK40_5350	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AK40_5351	PF00528	Binding-protein-dependent transport system inner membrane component
AK40_5352	PF00528	Binding-protein-dependent transport system inner membrane component
AK40_5352	PF12911	AK40_5352
AK40_5353	PF00005	ABC transporter
AK40_5353	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AK40_5354	PF00005	ABC transporter
AK40_5354	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AK40_5355	PF01554	MatE
AK40_5356	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AK40_5358	PF03960	ArsC family
AK40_5359	PF03741	AK40_5359
AK40_536	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AK40_536	PF03466	LysR substrate binding domain
AK40_5360	PF05389	Negative regulator of genetic competence (MecA)
AK40_5361	PF13091	PLD-like domain
AK40_5361	PF13396	AK40_5361
AK40_5362	PF06054	AK40_5362
AK40_5363	PF01432	Peptidase family M3
AK40_5363	PF08439	Oligopeptidase F
AK40_5365	PF13743	Thioredoxin
AK40_5366	PF01152	Bacterial-like globin
AK40_5367	PF01928	CYTH domain
AK40_5369	PF04607	Region found in RelA / SpoT proteins
AK40_537	PF02082	Transcriptional regulator
AK40_5370	PF01513	ATP-NAD kinase
AK40_5371	PF00849	RNA pseudouridylate synthase
AK40_5372	PF11962	Peptidase_G2, IMC autoproteolytic cleavage domain
AK40_5373	PF00149	Calcineurin-like phosphoesterase
AK40_5374	PF01098	AK40_5374
AK40_5375	PF00535	Glycosyl transferase family 2
AK40_5376	PF08241	Methyltransferase domain
AK40_5377	PF05711	Macrocin-O-methyltransferase (TylF)
AK40_5378	PF01391	Collagen triple helix repeat (20 copies)
AK40_5379	PF00535	Glycosyl transferase family 2
AK40_5379	PF13176	Tetratricopeptide repeat
AK40_5379	PF13181	Tetratricopeptide repeat
AK40_538	PF01323	DSBA-like thioredoxin domain
AK40_5380	PF13489	Methyltransferase domain
AK40_5381	PF13712	Glycosyltransferase like family
AK40_5382	PF13712	Glycosyltransferase like family
AK40_5383	PF00483	Nucleotidyl transferase
AK40_5384	PF00908	dTDP-4-dehydrorhamnose 3,5-epimerase
AK40_5385	PF16363	AK40_5385
AK40_5386	PF04321	RmlD substrate binding domain
AK40_5387	PF13561	Enoyl-(Acyl carrier protein) reductase
AK40_5388	PF14153	AK40_5388
AK40_5389	PF10612	AK40_5389
AK40_539	PF00881	Nitroreductase family
AK40_5390	PF07098	AK40_5390
AK40_5392	PF10612	AK40_5392
AK40_5393	PF00580	UvrD/REP helicase N-terminal domain
AK40_5393	PF13361	UvrD-like helicase C-terminal domain
AK40_5394	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)
AK40_5394	PF01348	AK40_5394
AK40_5395	PF00580	UvrD/REP helicase N-terminal domain
AK40_5396	PF13673	Acetyltransferase (GNAT) domain
AK40_5397	PF13563	2'-5' RNA ligase superfamily
AK40_5398	PF00756	Putative esterase
AK40_5399	PF00892	EamA-like transporter family
AK40_54	PF00501	AMP-binding enzyme
AK40_54	PF13193	AMP-binding enzyme C-terminal domain
AK40_5400	PF06713	AK40_5400
AK40_5401	PF02368	Bacterial Ig-like domain (group 2)
AK40_5402	PF00474	Sodium:solute symporter family
AK40_5403	PF00425	chorismate binding enzyme
AK40_5403	PF04715	Anthranilate synthase component I, N terminal region
AK40_5404	PF00117	Glutamine amidotransferase class-I
AK40_5405	PF00591	Glycosyl transferase family, a/b domain
AK40_5405	PF02885	Glycosyl transferase family, helical bundle domain
AK40_5406	PF00218	Indole-3-glycerol phosphate synthase
AK40_5407	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
AK40_5408	PF00291	Pyridoxal-phosphate dependent enzyme
AK40_5409	PF00290	Tryptophan synthase alpha chain
AK40_541	PF01425	Amidase
AK40_5410	PF13221	AK40_5410
AK40_5411	PF02652	AK40_5411
AK40_5412	PF10042	AK40_5412
AK40_5414	PF13240	AK40_5414
AK40_5416	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AK40_5416	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AK40_5417	PF13048	AK40_5417
AK40_5418	PF00881	Nitroreductase family
AK40_5419	PF02624	YcaO-like family
AK40_542	PF01594	AK40_542
AK40_5421	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
AK40_5421	PF00364	Biotin-requiring enzyme
AK40_5421	PF02817	e3 binding domain
AK40_5422	PF00676	Dehydrogenase E1 component
AK40_5422	PF02779	Transketolase, pyrimidine binding domain
AK40_5422	PF16870	AK40_5422
AK40_5423	PF01381	Helix-turn-helix
AK40_5425	PF13121	AK40_5425
AK40_5429	PF12870	Lumazine-binding domain
AK40_543	PF00056	lactate/malate dehydrogenase, NAD binding domain
AK40_543	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
AK40_5430	PF03551	Transcriptional regulator PadR-like family
AK40_544	PF01593	Flavin containing amine oxidoreductase
AK40_5447	PF00202	Aminotransferase class-III
AK40_5449	PF13561	Enoyl-(Acyl carrier protein) reductase
AK40_545	PF02492	CobW/HypB/UreG, nucleotide-binding domain
AK40_545	PF07683	Cobalamin synthesis protein cobW C-terminal domain
AK40_5450	PF00005	ABC transporter
AK40_5450	PF13732	AK40_5450
AK40_5451	PF12698	ABC-2 family transporter protein
AK40_5454	PF08241	Methyltransferase domain
AK40_5456	PF00768	D-alanyl-D-alanine carboxypeptidase
AK40_5456	PF07943	Penicillin-binding protein 5, C-terminal domain
AK40_5457	PF00717	Peptidase S24-like
AK40_5458	PF12389	AK40_5458
AK40_5459	PF13256	AK40_5459
AK40_546	PF00395	S-layer homology domain
AK40_5460	PF12389	AK40_5460
AK40_5461	PF01381	Helix-turn-helix
AK40_5461	PF08671	Anti-repressor SinI
AK40_5462	PF05547	AK40_5462
AK40_5463	PF00171	Aldehyde dehydrogenase family
AK40_5464	PF00005	ABC transporter
AK40_5464	PF08402	TOBE domain
AK40_5465	PF00528	Binding-protein-dependent transport system inner membrane component
AK40_5466	PF00528	Binding-protein-dependent transport system inner membrane component
AK40_5467	PF13416	Bacterial extracellular solute-binding protein
AK40_5468	PF01569	PAP2 superfamily
AK40_5469	PF03176	MMPL family
AK40_547	PF00440	Bacterial regulatory proteins, tetR family
AK40_5471	PF00849	RNA pseudouridylate synthase
AK40_5472	PF07853	AK40_5472
AK40_5473	PF00188	Cysteine-rich secretory protein family
AK40_5474	PF02754	AK40_5474
AK40_5474	PF13183	4Fe-4S dicluster domain
AK40_5475	PF01565	FAD binding domain
AK40_5475	PF02913	FAD linked oxidases, C-terminal domain
AK40_5476	PF05651	AK40_5476
AK40_5476	PF13556	PucR C-terminal helix-turn-helix domain
AK40_5478	PF00072	Response regulator receiver domain
AK40_5478	PF00486	Transcriptional regulatory protein, C terminal
AK40_5479	PF00512	His Kinase A (phospho-acceptor) domain
AK40_5479	PF00672	HAMP domain
AK40_5479	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_548	PF00501	AMP-binding enzyme
AK40_548	PF13193	AMP-binding enzyme C-terminal domain
AK40_5480	PF00392	Bacterial regulatory proteins, gntR family
AK40_5480	PF07729	FCD domain
AK40_5481	PF02754	AK40_5481
AK40_5482	PF02589	Uncharacterised ACR, YkgG family COG1556
AK40_5482	PF11870	AK40_5482
AK40_5482	PF13183	4Fe-4S dicluster domain
AK40_5483	PF02589	Uncharacterised ACR, YkgG family COG1556
AK40_5484	PF01478	Type IV leader peptidase family
AK40_5484	PF06750	AK40_5484
AK40_5486	PF01226	Formate/nitrite transporter
AK40_5487	PF03741	AK40_5487
AK40_5488	PF02386	Cation transport protein
AK40_5489	PF00269	Small, acid-soluble spore proteins, alpha/beta type
AK40_549	PF01575	MaoC like domain
AK40_5490	PF01575	MaoC like domain
AK40_5491	PF09602	AK40_5491
AK40_5492	PF03551	Transcriptional regulator PadR-like family
AK40_5494	PF00106	short chain dehydrogenase
AK40_5495	PF00561	alpha/beta hydrolase fold
AK40_5496	PF01266	FAD dependent oxidoreductase
AK40_5497	PF00565	Staphylococcal nuclease homologue
AK40_5498	PF13616	PPIC-type PPIASE domain
AK40_55	PF12459	AK40_55
AK40_550	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
AK40_550	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
AK40_5500	PF00589	Phage integrase family
AK40_5501	PF00589	Phage integrase family
AK40_5504	PF00145	C-5 cytosine-specific DNA methylase
AK40_5508	PF12870	Lumazine-binding domain
AK40_551	PF13458	Periplasmic binding protein
AK40_5510	PF01695	IstB-like ATP binding protein
AK40_5511	PF02810	SEC-C motif
AK40_5512	PF01022	Bacterial regulatory protein, arsR family
AK40_5517	PF13113	AK40_5517
AK40_552	PF00005	ABC transporter
AK40_552	PF12399	Branched-chain amino acid ATP-binding cassette transporter
AK40_5526	PF13027	AK40_5526
AK40_5527	PF00589	Phage integrase family
AK40_5529	PF01131	DNA topoisomerase
AK40_5529	PF01751	Toprim domain
AK40_5529	PF13342	AK40_5529
AK40_553	PF00005	ABC transporter
AK40_5530	PF00004	ATPase family associated with various cellular activities (AAA)
AK40_5533	PF01757	AK40_5533
AK40_5534	PF00877	NlpC/P60 family
AK40_5536	PF00877	NlpC/P60 family
AK40_5536	PF01551	Peptidase family M23
AK40_5536	PF06725	3D domain
AK40_5537	PF04610	AK40_5537
AK40_5539	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)
AK40_554	PF02653	AK40_554
AK40_5542	PF12666	AK40_5542
AK40_5546	PF12965	AK40_5546
AK40_555	PF02653	AK40_555
AK40_5550	PF00712	DNA polymerase III beta subunit, N-terminal domain
AK40_5550	PF02767	DNA polymerase III beta subunit, central domain
AK40_5550	PF02768	DNA polymerase III beta subunit, C-terminal domain
AK40_5553	PF14460	AK40_5553
AK40_5555	PF00899	ThiF family
AK40_5558	PF14208	AK40_5558
AK40_556	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AK40_5562	PF00482	Type II secretion system (T2SS), protein F
AK40_5563	PF00437	Type II/IV secretion system protein
AK40_5565	PF16976	AK40_5565
AK40_5567	PF13360	PQQ-like domain
AK40_557	PF16157	AK40_557
AK40_5574	PF13814	AK40_5574
AK40_5575	PF12696	TraM recognition site of TraD and TraG
AK40_5576	PF00772	DnaB-like helicase N terminal domain
AK40_5576	PF03796	DnaB-like helicase C terminal domain
AK40_558	PF14552	Tautomerase enzyme
AK40_5580	PF00149	Calcineurin-like phosphoesterase
AK40_5581	PF13034	AK40_5581
AK40_5586	PF04471	Restriction endonuclease
AK40_5587	PF15525	Domain of unknown function (DUF4652)
AK40_559	PF02627	Carboxymuconolactone decarboxylase family
AK40_56	PF01546	Peptidase family M20/M25/M40
AK40_56	PF07687	Peptidase dimerisation domain
AK40_560	PF01047	MarR family
AK40_5600	PF00395	S-layer homology domain
AK40_5601	PF10881	AK40_5601
AK40_5603	PF17633	AK40_5603
AK40_5604	PF09643	YopX protein
AK40_5605	PF13173	AAA domain
AK40_561	PF00296	Luciferase-like monooxygenase
AK40_562	PF01654	AK40_562
AK40_5623	PF13443	Cro/C1-type HTH DNA-binding domain
AK40_5628	PF01580	FtsK/SpoIIIE family
AK40_563	PF02322	AK40_563
AK40_5631	PF03551	Transcriptional regulator PadR-like family
AK40_564	PF00005	ABC transporter
AK40_564	PF00664	ABC transporter transmembrane region
AK40_5646	PF03642	MAP domain
AK40_565	PF00005	ABC transporter
AK40_565	PF00664	ABC transporter transmembrane region
AK40_5651	PF07972	NrdI Flavodoxin like
AK40_5661	PF00817	impB/mucB/samB family
AK40_5661	PF11798	IMS family HHH motif
AK40_5661	PF11799	impB/mucB/samB family C-terminal domain
AK40_5662	PF13157	AK40_5662
AK40_5665	PF10612	AK40_5665
AK40_5667	PF00589	Phage integrase family
AK40_5668	PF00589	Phage integrase family
AK40_5668	PF02899	Phage integrase, N-terminal SAM-like domain
AK40_5669	PF08863	AK40_5669
AK40_5672	PF09752	Uncharacterized conserved protein (DUF2048)
AK40_5673	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_5674	PF00072	Response regulator receiver domain
AK40_5674	PF00196	Bacterial regulatory proteins, luxR family
AK40_5675	PF01381	Helix-turn-helix
AK40_5676	PF01381	Helix-turn-helix
AK40_568	PF02016	LD-carboxypeptidase
AK40_5681	PF12169	DNA polymerase III subunits gamma and tau domain III
AK40_5681	PF13177	DNA polymerase III, delta subunit
AK40_5684	PF14074	AK40_5684
AK40_5687	PF01507	Phosphoadenosine phosphosulfate reductase family
AK40_569	PF00768	D-alanyl-D-alanine carboxypeptidase
AK40_5690	PF00589	Phage integrase family
AK40_5691	PF00589	Phage integrase family
AK40_5691	PF02899	Phage integrase, N-terminal SAM-like domain
AK40_5697	PF00717	Peptidase S24-like
AK40_570	PF00881	Nitroreductase family
AK40_5703	PF03738	Glutathionylspermidine synthase preATP-grasp
AK40_5704	PF01381	Helix-turn-helix
AK40_5705	PF01522	Polysaccharide deacetylase
AK40_5706	PF06445	GyrI-like small molecule binding domain
AK40_5706	PF12833	Helix-turn-helix domain
AK40_5707	PF11208	AK40_5707
AK40_5708	PF11208	AK40_5708
AK40_571	PF00877	NlpC/P60 family
AK40_571	PF08239	Bacterial SH3 domain
AK40_5713	PF00589	Phage integrase family
AK40_5713	PF13102	Phage integrase SAM-like domain
AK40_5716	PF00565	Staphylococcal nuclease homologue
AK40_5717	PF10782	AK40_5717
AK40_572	PF00561	alpha/beta hydrolase fold
AK40_5720	PF00717	Peptidase S24-like
AK40_5721	PF00140	Sigma-70 factor, region 1
AK40_5721	PF04542	Sigma-70 region 2
AK40_5721	PF04545	Sigma-70, region 4
AK40_5722	PF14076	AK40_5722
AK40_573	PF00005	ABC transporter
AK40_573	PF00664	ABC transporter transmembrane region
AK40_5732	PF06144	DNA polymerase III, delta subunit
AK40_5734	PF08858	IDEAL domain
AK40_5734	PF08864	UPF0302 domain
AK40_574	PF00072	Response regulator receiver domain
AK40_574	PF00486	Transcriptional regulatory protein, C terminal
AK40_5741	PF01022	Bacterial regulatory protein, arsR family
AK40_5742	PF00575	S1 RNA binding domain
AK40_5744	PF00589	Phage integrase family
AK40_5746	PF02082	Transcriptional regulator
AK40_5747	PF02086	D12 class N6 adenine-specific DNA methyltransferase
AK40_575	PF00512	His Kinase A (phospho-acceptor) domain
AK40_575	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_5753	PF04014	Antidote-toxin recognition MazE
AK40_5755	PF17209	AK40_5755
AK40_5758	PF00145	C-5 cytosine-specific DNA methylase
AK40_576	PF11337	AK40_576
AK40_5766	PF00144	Beta-lactamase
AK40_5767	PF09932	AK40_5767
AK40_5768	PF17094	AK40_5768
AK40_5769	PF07609	AK40_5769
AK40_577	PF00106	short chain dehydrogenase
AK40_5770	PF13419	Haloacid dehalogenase-like hydrolase
AK40_5771	PF00293	NUDIX domain
AK40_5773	PF01636	Phosphotransferase enzyme family
AK40_5774	PF00239	Resolvase, N terminal domain
AK40_5774	PF02796	Helix-turn-helix domain of resolvase
AK40_5775	PF01526	AK40_5775
AK40_5775	PF13700	AK40_5775
AK40_578	PF01596	O-methyltransferase
AK40_5782	PF12811	AK40_5782
AK40_5784	PF02810	SEC-C motif
AK40_5787	PF00085	Thioredoxin
AK40_579	PF04439	Streptomycin adenylyltransferase
AK40_5790	PF14270	AK40_5790
AK40_5792	PF03692	AK40_5792
AK40_5793	PF00580	UvrD/REP helicase N-terminal domain
AK40_5794	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)
AK40_5794	PF01348	AK40_5794
AK40_5795	PF00580	UvrD/REP helicase N-terminal domain
AK40_5795	PF13361	UvrD-like helicase C-terminal domain
AK40_5796	PF13177	DNA polymerase III, delta subunit
AK40_58	PF00258	Flavodoxin
AK40_580	PF01522	Polysaccharide deacetylase
AK40_5800	PF00854	POT family
AK40_5801	PF13255	AK40_5801
AK40_5803	PF00005	ABC transporter
AK40_5803	PF00664	ABC transporter transmembrane region
AK40_5803	PF03412	Peptidase C39 family
AK40_5804	PF13437	HlyD family secretion protein
AK40_581	PF13630	AK40_581
AK40_5810	PF06527	AK40_5810
AK40_5811	PF00665	Integrase core domain
AK40_5811	PF08722	TnsA endonuclease N terminal
AK40_5812	PF05621	AK40_5812
AK40_5813	PF06527	AK40_5813
AK40_5814	PF01555	DNA methylase
AK40_5816	PF01494	FAD binding domain
AK40_5819	PF13156	AK40_5819
AK40_582	PF00293	NUDIX domain
AK40_5820	PF14090	AK40_5820
AK40_5824	PF13222	AK40_5824
AK40_5825	PF00145	C-5 cytosine-specific DNA methylase
AK40_5827	PF05791	Bacillus haemolytic enterotoxin (HBL)
AK40_5828	PF05791	Bacillus haemolytic enterotoxin (HBL)
AK40_5829	PF05791	Bacillus haemolytic enterotoxin (HBL)
AK40_583	PF01243	Pyridoxamine 5'-phosphate oxidase
AK40_5830	PF01022	Bacterial regulatory protein, arsR family
AK40_5831	PF03496	ADP-ribosyltransferase exoenzyme
AK40_5832	PF03496	ADP-ribosyltransferase exoenzyme
AK40_5832	PF07737	Anthrax toxin lethal factor, N- and C-terminal domain
AK40_5833	PF10368	Putative cell-wall binding lipoprotein
AK40_5834	PF01522	Polysaccharide deacetylase
AK40_5836	PF01841	Transglutaminase-like superfamily
AK40_5839	PF03496	ADP-ribosyltransferase exoenzyme
AK40_584	PF00742	Homoserine dehydrogenase
AK40_584	PF03447	Homoserine dehydrogenase, NAD binding domain
AK40_5840	PF09156	Anthrax toxin lethal factor, middle domain
AK40_5841	PF03495	Clostridial binary toxin B/anthrax toxin PA
AK40_5841	PF07691	PA14 domain
AK40_5841	PF17475	AK40_5841
AK40_5841	PF17476	AK40_5841
AK40_5842	PF00145	C-5 cytosine-specific DNA methylase
AK40_5843	PF03496	ADP-ribosyltransferase exoenzyme
AK40_5844	PF03496	ADP-ribosyltransferase exoenzyme
AK40_5845	PF03496	ADP-ribosyltransferase exoenzyme
AK40_5846	PF01609	Transposase DDE domain
AK40_5847	PF01609	Transposase DDE domain
AK40_5848	PF01609	Transposase DDE domain
AK40_5848	PF05598	AK40_5848
AK40_585	PF00291	Pyridoxal-phosphate dependent enzyme
AK40_5850	PF05043	Mga helix-turn-helix domain
AK40_5853	PF01385	AK40_5853
AK40_5853	PF07282	AK40_5853
AK40_5854	PF12323	AK40_5854
AK40_5856	PF01051	Initiator Replication protein
AK40_5857	PF01385	AK40_5857
AK40_5857	PF07282	AK40_5857
AK40_5857	PF12323	AK40_5857
AK40_5859	PF00512	His Kinase A (phospho-acceptor) domain
AK40_5859	PF00672	HAMP domain
AK40_5859	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_586	PF00288	GHMP kinases N terminal domain
AK40_586	PF08544	GHMP kinases C terminal
AK40_5860	PF00072	Response regulator receiver domain
AK40_5860	PF00486	Transcriptional regulatory protein, C terminal
AK40_5862	PF09388	Spo0E like sporulation regulatory protein
AK40_5863	PF03496	ADP-ribosyltransferase exoenzyme
AK40_5864	PF01510	N-acetylmuramoyl-L-alanine amidase
AK40_5865	PF00561	alpha/beta hydrolase fold
AK40_5867	PF10703	Molybdenum cofactor biosynthesis protein F
AK40_5869	PF02624	YcaO-like family
AK40_5872	PF13424	Tetratricopeptide repeat
AK40_5874	PF17209	AK40_5874
AK40_5875	PF01022	Bacterial regulatory protein, arsR family
AK40_5876	PF02600	Disulfide bond formation protein DsbB
AK40_5879	PF00565	Staphylococcal nuclease homologue
AK40_588	PF11308	AK40_588
AK40_5881	PF12784	AK40_5881
AK40_5884	PF08378	AK40_5884
AK40_589	PF03816	Cell envelope-related transcriptional attenuator domain
AK40_5893	PF05175	Methyltransferase small domain
AK40_5897	PF07693	AK40_5897
AK40_5898	PF01381	Helix-turn-helix
AK40_5903	PF00589	Phage integrase family
AK40_5903	PF02899	Phage integrase, N-terminal SAM-like domain
AK40_5906	PF00082	Subtilase family
AK40_5907	PF09000	Cytotoxic
AK40_5909	PF05168	HEPN domain
AK40_591	PF00072	Response regulator receiver domain
AK40_591	PF00486	Transcriptional regulatory protein, C terminal
AK40_5910	PF01909	Nucleotidyltransferase domain
AK40_5912	PF00899	ThiF family
AK40_5916	PF14460	AK40_5916
AK40_592	PF00512	His Kinase A (phospho-acceptor) domain
AK40_592	PF00672	HAMP domain
AK40_592	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_5921	PF00712	DNA polymerase III beta subunit, N-terminal domain
AK40_5921	PF02767	DNA polymerase III beta subunit, central domain
AK40_5921	PF02768	DNA polymerase III beta subunit, C-terminal domain
AK40_5922	PF04098	Rad52/22 family double-strand break repair protein
AK40_593	PF01522	Polysaccharide deacetylase
AK40_5933	PF01381	Helix-turn-helix
AK40_5934	PF09397	Ftsk gamma domain
AK40_5934	PF12696	TraM recognition site of TraD and TraG
AK40_5936	PF13814	AK40_5936
AK40_5938	PF00091	Tubulin/FtsZ family, GTPase domain
AK40_594	PF10368	Putative cell-wall binding lipoprotein
AK40_5945	PF14208	AK40_5945
AK40_5946	PF00395	S-layer homology domain
AK40_5949	PF08666	SAF domain
AK40_5949	PF16976	AK40_5949
AK40_595	PF02308	AK40_595
AK40_5950	PF13614	AAA domain
AK40_5951	PF00437	Type II/IV secretion system protein
AK40_5957	PF13731	AK40_5957
AK40_5958	PF06030	AK40_5958
AK40_5958	PF11797	AK40_5958
AK40_5959	PF13731	AK40_5959
AK40_596	PF00583	Acetyltransferase (GNAT) family
AK40_5964	PF00874	PRD domain
AK40_5964	PF03123	CAT RNA binding domain
AK40_5965	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
AK40_5965	PF00367	phosphotransferase system, EIIB
AK40_5965	PF02378	Phosphotransferase system, EIIC
AK40_5966	PF00232	Glycosyl hydrolase family 1
AK40_597	PF04183	IucA / IucC family
AK40_597	PF06276	Ferric iron reductase FhuF-like transporter
AK40_5975	PF13091	PLD-like domain
AK40_5978	PF12965	AK40_5978
AK40_5979	PF12784	AK40_5979
AK40_598	PF04183	IucA / IucC family
AK40_598	PF06276	Ferric iron reductase FhuF-like transporter
AK40_5980	PF00395	S-layer homology domain
AK40_5982	PF12666	AK40_5982
AK40_5984	PF01935	Domain of unknown function DUF87
AK40_5986	PF00877	NlpC/P60 family
AK40_5986	PF01551	Peptidase family M23
AK40_5986	PF13702	Lysozyme-like
AK40_5989	PF10087	AK40_5989
AK40_599	PF00501	AMP-binding enzyme
AK40_599	PF13193	AMP-binding enzyme C-terminal domain
AK40_5990	PF02517	CAAX protease self-immunity
AK40_5992	PF04235	AK40_5992
AK40_5993	PF00085	Thioredoxin
AK40_5998	PF08863	AK40_5998
AK40_5999	PF00817	impB/mucB/samB family
AK40_5999	PF11798	IMS family HHH motif
AK40_5999	PF11799	impB/mucB/samB family C-terminal domain
AK40_6	PF00528	Binding-protein-dependent transport system inner membrane component
AK40_6000	PF01022	Bacterial regulatory protein, arsR family
AK40_6001	PF08245	Mur ligase middle domain
AK40_6002	PF14102	AK40_6002
AK40_6003	PF09587	Bacterial capsule synthesis protein PGA_cap
AK40_6004	PF01019	Gamma-glutamyltranspeptidase
AK40_6009	PF00874	PRD domain
AK40_6009	PF05043	Mga helix-turn-helix domain
AK40_6009	PF08280	M protein trans-acting positive regulator (MGA) HTH domain
AK40_6010	PF01381	Helix-turn-helix
AK40_6011	PF00589	Phage integrase family
AK40_6011	PF02899	Phage integrase, N-terminal SAM-like domain
AK40_6012	PF10782	AK40_6012
AK40_6013	PF12728	Helix-turn-helix domain
AK40_6016	PF06013	Proteins of 100 residues with WXG
AK40_6016	PF12639	DNase/tRNase domain of colicin-like bacteriocin
AK40_6017	PF14568	SMI1-KNR4 cell-wall
AK40_6018	PF12870	Lumazine-binding domain
AK40_6019	PF00117	Glutamine amidotransferase class-I
AK40_602	PF01261	Xylose isomerase-like TIM barrel
AK40_6020	PF00155	Aminotransferase class I and II
AK40_6020	PF00392	Bacterial regulatory proteins, gntR family
AK40_6021	PF05163	DinB family
AK40_6024	PF01022	Bacterial regulatory protein, arsR family
AK40_6025	PF00395	S-layer homology domain
AK40_6026	PF00395	S-layer homology domain
AK40_6026	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
AK40_6027	PF01381	Helix-turn-helix
AK40_6027	PF07883	Cupin domain
AK40_6028	PF13042	AK40_6028
AK40_6029	PF01522	Polysaccharide deacetylase
AK40_603	PF00269	Small, acid-soluble spore proteins, alpha/beta type
AK40_6030	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AK40_6030	PF00672	HAMP domain
AK40_6030	PF12729	AK40_6030
AK40_6031	PF03965	Penicillinase repressor
AK40_6032	PF05569	BlaR1 peptidase M56
AK40_6033	PF07883	Cupin domain
AK40_6034	PF01381	Helix-turn-helix
AK40_6035	PF00291	Pyridoxal-phosphate dependent enzyme
AK40_6037	PF00005	ABC transporter
AK40_604	PF07690	Major Facilitator Superfamily
AK40_6040	PF00069	Protein kinase domain
AK40_6041	PF00589	Phage integrase family
AK40_6044	PF03497	Anthrax toxin LF subunit
AK40_6044	PF09156	Anthrax toxin lethal factor, middle domain
AK40_6048	PF13495	Phage integrase, N-terminal SAM-like domain
AK40_605	PF01810	AK40_605
AK40_6050	PF00239	Resolvase, N terminal domain
AK40_6053	PF08863	AK40_6053
AK40_6054	PF00817	impB/mucB/samB family
AK40_6054	PF11798	IMS family HHH motif
AK40_6054	PF11799	impB/mucB/samB family C-terminal domain
AK40_6055	PF02517	CAAX protease self-immunity
AK40_6057	PF17443	AK40_6057
AK40_6058	PF14166	AK40_6058
AK40_6059	PF07751	AK40_6059
AK40_606	PF00155	Aminotransferase class I and II
AK40_606	PF00392	Bacterial regulatory proteins, gntR family
AK40_6062	PF13152	AK40_6062
AK40_6062	PF13411	MerR HTH family regulatory protein
AK40_6065	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AK40_607	PF13069	AK40_607
AK40_6071	PF01022	Bacterial regulatory protein, arsR family
AK40_6076	PF13614	AAA domain
AK40_6077	PF08708	Primase C terminal 1 (PriCT-1)
AK40_608	PF01734	Patatin-like phospholipase
AK40_6081	PF17362	AK40_6081
AK40_6085	PF17631	AK40_6085
AK40_6087	PF02534	Type IV secretory system Conjugative DNA transfer
AK40_609	PF09680	AK40_609
AK40_61	PF01636	Phosphotransferase enzyme family
AK40_610	PF09234	Domain of unknown function (DUF1963)
AK40_6103	PF00437	Type II/IV secretion system protein
AK40_6109	PF04956	AK40_6109
AK40_611	PF01841	Transglutaminase-like superfamily
AK40_6111	PF02534	Type IV secretory system Conjugative DNA transfer
AK40_6111	PF12696	TraM recognition site of TraD and TraG
AK40_6115	PF17332	AK40_6115
AK40_6118	PF00877	NlpC/P60 family
AK40_6118	PF13702	Lysozyme-like
AK40_612	PF13314	AK40_612
AK40_6121	PF17632	AK40_6121
AK40_6126	PF17633	AK40_6126
AK40_6128	PF00176	SNF2 family N-terminal domain
AK40_6128	PF00271	Helicase conserved C-terminal domain
AK40_6128	PF07669	Eco57I restriction-modification methylase
AK40_613	PF00293	NUDIX domain
AK40_6130	PF04307	AK40_6130
AK40_6132	PF13154	AK40_6132
AK40_6132	PF13155	Toprim-like
AK40_6136	PF01131	DNA topoisomerase
AK40_6136	PF01751	Toprim domain
AK40_6136	PF13342	AK40_6136
AK40_6137	PF02517	CAAX protease self-immunity
AK40_614	PF02540	NAD synthase
AK40_6148	PF05065	Phage capsid family
AK40_6149	PF14550	AK40_6149
AK40_615	PF02687	AK40_615
AK40_6150	PF04233	AK40_6150
AK40_6151	PF04860	Phage portal protein
AK40_6155	PF06056	Putative ATPase subunit of terminase (gpP-like)
AK40_6157	PF01541	GIY-YIG catalytic domain
AK40_6158	PF00239	Resolvase, N terminal domain
AK40_6158	PF02796	Helix-turn-helix domain of resolvase
AK40_616	PF04014	Antidote-toxin recognition MazE
AK40_6164	PF03838	Recombination protein U
AK40_6167	PF01402	Ribbon-helix-helix protein, copG family
AK40_617	PF00082	Subtilase family
AK40_6175	PF00692	dUTPase
AK40_6176	PF13076	AK40_6176
AK40_618	PF12840	Helix-turn-helix domain
AK40_6181	PF00004	ATPase family associated with various cellular activities (AAA)
AK40_6182	PF09524	AK40_6182
AK40_6185	PF04404	AK40_6185
AK40_6186	PF05565	AK40_6186
AK40_619	PF00248	Aldo/keto reductase family
AK40_6190	PF02498	AK40_6190
AK40_6190	PF03374	AK40_6190
AK40_6191	PF01381	Helix-turn-helix
AK40_6192	PF01381	Helix-turn-helix
AK40_6196	PF12844	Helix-turn-helix domain
AK40_6197	PF11611	Domain of unknown function (DUF4352)
AK40_6198	PF13273	AK40_6198
AK40_6199	PF11611	Domain of unknown function (DUF4352)
AK40_620	PF07690	Major Facilitator Superfamily
AK40_6205	PF13614	AAA domain
AK40_6209	PF00583	Acetyltransferase (GNAT) family
AK40_6211	PF13152	AK40_6211
AK40_6211	PF13411	MerR HTH family regulatory protein
AK40_6212	PF09848	Uncharacterized conserved protein (DUF2075)
AK40_6213	PF00817	impB/mucB/samB family
AK40_6213	PF11798	IMS family HHH motif
AK40_6213	PF11799	impB/mucB/samB family C-terminal domain
AK40_6214	PF13157	AK40_6214
AK40_6217	PF10612	AK40_6217
AK40_6219	PF00589	Phage integrase family
AK40_622	PF14074	AK40_622
AK40_6220	PF00589	Phage integrase family
AK40_6220	PF02899	Phage integrase, N-terminal SAM-like domain
AK40_6221	PF08863	AK40_6221
AK40_6222	PF06013	Proteins of 100 residues with WXG
AK40_6222	PF14449	AK40_6222
AK40_6224	PF01520	N-acetylmuramoyl-L-alanine amidase
AK40_6224	PF12123	N-acetylmuramoyl-l-alanine amidase
AK40_6225	PF05105	AK40_6225
AK40_6227	PF10651	Domain of unknown function (DUF2479)
AK40_6228	PF06605	Prophage endopeptidase tail
AK40_6228	PF13884	Chaperone of endosialidase
AK40_6229	PF05709	Phage tail protein
AK40_623	PF04978	Protein of unknown function (DUF664)
AK40_6232	PF12363	AK40_6232
AK40_6233	PF06199	AK40_6233
AK40_6235	PF04883	AK40_6235
AK40_6236	PF12206	Domain of unknown function (DUF3599)
AK40_6237	PF11436	Protein of unknown function (DUF3199)
AK40_6238	PF10668	AK40_6238
AK40_624	PF03193	Protein of unknown function, DUF258
AK40_6243	PF03838	Recombination protein U
AK40_6247	PF01402	Ribbon-helix-helix protein, copG family
AK40_625	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AK40_625	PF00672	HAMP domain
AK40_625	PF02743	Cache domain
AK40_6255	PF00692	dUTPase
AK40_6256	PF13076	AK40_6256
AK40_6262	PF00772	DnaB-like helicase N terminal domain
AK40_6262	PF03796	DnaB-like helicase C terminal domain
AK40_6265	PF06378	AK40_6265
AK40_627	PF13141	AK40_627
AK40_6271	PF08346	AK40_6271
AK40_6272	PF01381	Helix-turn-helix
AK40_6273	PF01381	Helix-turn-helix
AK40_6277	PF01381	Helix-turn-helix
AK40_6279	PF14020	AK40_6279
AK40_628	PF03845	AK40_628
AK40_6281	PF06406	StbA protein
AK40_6285	PF01381	Helix-turn-helix
AK40_6286	PF01520	N-acetylmuramoyl-L-alanine amidase
AK40_6286	PF12123	N-acetylmuramoyl-l-alanine amidase
AK40_6287	PF05105	AK40_6287
AK40_629	PF00210	Ferritin-like domain
AK40_6290	PF12708	Pectate lyase superfamily protein
AK40_6291	PF06605	Prophage endopeptidase tail
AK40_6292	PF05709	Phage tail protein
AK40_6293	PF10145	AK40_6293
AK40_6296	PF06199	AK40_6296
AK40_6298	PF04883	AK40_6298
AK40_630	PF13075	AK40_630
AK40_6300	PF05135	Phage gp6-like head-tail connector protein
AK40_6302	PF17236	AK40_6302
AK40_6303	PF14265	AK40_6303
AK40_6304	PF04233	AK40_6304
AK40_6305	PF05133	Phage portal protein, SPP1 Gp6-like
AK40_6306	PF01935	Domain of unknown function DUF87
AK40_6306	PF12696	TraM recognition site of TraD and TraG
AK40_6307	PF01435	Peptidase family M48
AK40_631	PF02230	Phospholipase/Carboxylesterase
AK40_6314	PF03432	AK40_6314
AK40_6315	PF05713	AK40_6315
AK40_6319	PF05732	AK40_6319
AK40_632	PF00296	Luciferase-like monooxygenase
AK40_633	PF13035	AK40_633
AK40_634	PF01593	Flavin containing amine oxidoreductase
AK40_635	PF13302	Acetyltransferase (GNAT) domain
AK40_636	PF00248	Aldo/keto reductase family
AK40_637	PF02492	CobW/HypB/UreG, nucleotide-binding domain
AK40_637	PF07683	Cobalamin synthesis protein cobW C-terminal domain
AK40_638	PF00583	Acetyltransferase (GNAT) family
AK40_641	PF06013	Proteins of 100 residues with WXG
AK40_642	PF01297	Periplasmic solute binding protein family
AK40_644	PF13460	NADH(P)-binding
AK40_645	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
AK40_646	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
AK40_646	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
AK40_647	PF10947	AK40_647
AK40_648	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AK40_649	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AK40_65	PF01554	MatE
AK40_651	PF00300	Histidine phosphatase superfamily (branch 1)
AK40_653	PF08757	AK40_653
AK40_654	PF00293	NUDIX domain
AK40_654	PF12535	Hydrolase of X-linked nucleoside diphosphate N terminal
AK40_655	PF09335	AK40_655
AK40_656	PF01943	AK40_656
AK40_656	PF14667	Polysaccharide biosynthesis C-terminal domain
AK40_657	PF01544	CorA-like Mg2+ transporter protein
AK40_658	PF03773	AK40_658
AK40_659	PF09323	AK40_659
AK40_66	PF02673	AK40_66
AK40_660	PF03061	Thioesterase superfamily
AK40_661	PF13091	PLD-like domain
AK40_662	PF07875	AK40_662
AK40_664	PF13460	NADH(P)-binding
AK40_665	PF04306	AK40_665
AK40_666	PF00571	CBS domain
AK40_666	PF01595	AK40_666
AK40_666	PF03471	Transporter associated domain
AK40_668	PF00571	CBS domain
AK40_669	PF05525	AK40_669
AK40_67	PF14595	Thioredoxin
AK40_670	PF01588	Putative tRNA binding domain
AK40_671	PF07609	AK40_671
AK40_673	PF07454	AK40_673
AK40_674	PF00583	Acetyltransferase (GNAT) family
AK40_675	PF02557	D-alanyl-D-alanine carboxypeptidase
AK40_676	PF00293	NUDIX domain
AK40_677	PF01425	Amidase
AK40_678	PF07690	Major Facilitator Superfamily
AK40_679	PF01957	NfeD-like C-terminal, partner-binding
AK40_68	PF14184	AK40_68
AK40_680	PF01145	SPFH domain / Band 7 family
AK40_681	PF03241	4-hydroxyphenylacetate 3-hydroxylase C terminal
AK40_681	PF11794	4-hydroxyphenylacetate 3-hydroxylase N terminal
AK40_682	PF01614	Bacterial transcriptional regulator
AK40_682	PF09339	IclR helix-turn-helix domain
AK40_683	PF06574	FAD synthetase
AK40_684	PF06052	3-hydroxyanthranilic acid dioxygenase
AK40_685	PF04909	Amidohydrolase
AK40_686	PF14588	YjgF/chorismate_mutase-like, putative endoribonuclease
AK40_687	PF00171	Aldehyde dehydrogenase family
AK40_688	PF01557	Fumarylacetoacetate (FAA) hydrolase family
AK40_689	PF01118	Semialdehyde dehydrogenase, NAD binding domain
AK40_689	PF09290	Prokaryotic acetaldehyde dehydrogenase, dimerisation
AK40_69	PF01047	MarR family
AK40_690	PF00682	HMGL-like
AK40_690	PF07836	DmpG-like communication domain
AK40_691	PF01557	Fumarylacetoacetate (FAA) hydrolase family
AK40_692	PF01361	Tautomerase enzyme
AK40_693	PF00300	Histidine phosphatase superfamily (branch 1)
AK40_694	PF08282	haloacid dehalogenase-like hydrolase
AK40_696	PF00842	Alanine racemase, C-terminal domain
AK40_696	PF01168	Alanine racemase, N-terminal domain
AK40_697	PF13649	Methyltransferase domain
AK40_698	PF00583	Acetyltransferase (GNAT) family
AK40_7	PF13419	Haloacid dehalogenase-like hydrolase
AK40_700	PF00201	UDP-glucoronosyl and UDP-glucosyl transferase
AK40_701	PF02588	AK40_701
AK40_701	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
AK40_702	PF00155	Aminotransferase class I and II
AK40_702	PF00392	Bacterial regulatory proteins, gntR family
AK40_703	PF00583	Acetyltransferase (GNAT) family
AK40_704	PF00149	Calcineurin-like phosphoesterase
AK40_705	PF07853	AK40_705
AK40_706	PF13302	Acetyltransferase (GNAT) domain
AK40_707	PF13563	2'-5' RNA ligase superfamily
AK40_708	PF00583	Acetyltransferase (GNAT) family
AK40_71	PF00375	Sodium:dicarboxylate symporter family
AK40_719	PF13780	AK40_719
AK40_72	PF02386	Cation transport protein
AK40_724	PF09579	AK40_724
AK40_729	PF08241	Methyltransferase domain
AK40_730	PF01268	Formate--tetrahydrofolate ligase
AK40_732	PF00270	DEAD/DEAH box helicase
AK40_732	PF00271	Helicase conserved C-terminal domain
AK40_733	PF01261	Xylose isomerase-like TIM barrel
AK40_734	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AK40_736	PF00107	Zinc-binding dehydrogenase
AK40_736	PF08240	Alcohol dehydrogenase GroES-like domain
AK40_737	PF04542	Sigma-70 region 2
AK40_737	PF08281	Sigma-70, region 4
AK40_738	PF12207	Domain of unknown function (DUF3600)
AK40_74	PF09579	AK40_74
AK40_740	PF00753	Metallo-beta-lactamase superfamily
AK40_741	PF13063	AK40_741
AK40_742	PF00255	Glutathione peroxidase
AK40_743	PF01841	Transglutaminase-like superfamily
AK40_743	PF13559	AK40_743
AK40_744	PF01882	AK40_744
AK40_745	PF07726	ATPase family associated with various cellular activities (AAA)
AK40_748	PF00384	Molybdopterin oxidoreductase
AK40_748	PF01568	Molydopterin dinucleotide binding domain
AK40_748	PF14710	Respiratory nitrate reductase alpha N-terminal
AK40_749	PF13247	4Fe-4S dicluster domain
AK40_749	PF14711	Respiratory nitrate reductase beta C-terminal
AK40_750	PF02613	Nitrate reductase delta subunit
AK40_751	PF02665	Nitrate reductase gamma subunit
AK40_752	PF00027	Cyclic nucleotide-binding domain
AK40_752	PF13545	Crp-like helix-turn-helix domain
AK40_753	PF04055	Radical SAM superfamily
AK40_753	PF06463	Molybdenum Cofactor Synthesis C
AK40_753	PF13353	4Fe-4S single cluster domain
AK40_754	PF00899	ThiF family
AK40_755	PF00994	Probable molybdopterin binding domain
AK40_755	PF03453	MoeA N-terminal region (domain I and II)
AK40_755	PF03454	MoeA C-terminal region (domain IV)
AK40_756	PF02391	MoaE protein
AK40_757	PF02597	ThiS family
AK40_758	PF07690	Major Facilitator Superfamily
AK40_759	PF03547	AK40_759
AK40_76	PF03698	AK40_76
AK40_760	PF13241	Putative NAD(P)-binding
AK40_761	PF01903	CbiX
AK40_762	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
AK40_763	PF13806	Rieske-like [2Fe-2S] domain
AK40_764	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
AK40_764	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
AK40_764	PF04324	BFD-like [2Fe-2S] binding domain
AK40_764	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AK40_765	PF01814	Hemerythrin HHE cation binding domain
AK40_765	PF04405	AK40_765
AK40_767	PF05901	AK40_767
AK40_77	PF13050	AK40_77
AK40_770	PF00797	N-acetyltransferase
AK40_772	PF04232	Stage V sporulation protein S (SpoVS)
AK40_774	PF13128	AK40_774
AK40_777	PF01764	Lipase (class 3)
AK40_785	PF01966	HD domain
AK40_786	PF00005	ABC transporter
AK40_786	PF12848	ABC transporter
AK40_786	PF16326	AK40_786
AK40_787	PF12811	AK40_787
AK40_788	PF14201	AK40_788
AK40_789	PF00436	Single-strand binding protein family
AK40_79	PF01063	Aminotransferase class IV
AK40_790	PF00440	Bacterial regulatory proteins, tetR family
AK40_791	PF01494	FAD binding domain
AK40_792	PF08712	Scaffold protein Nfu/NifU N terminal
AK40_792	PF13646	HEAT repeats
AK40_792	PF13769	AK40_792
AK40_793	PF04134	AK40_793
AK40_794	PF06491	Disulphide isomerase
AK40_795	PF04445	Putative SAM-dependent methyltransferase
AK40_796	PF00750	tRNA synthetases class I (R)
AK40_796	PF03485	Arginyl tRNA synthetase N terminal domain
AK40_796	PF05746	DALR anticodon binding domain
AK40_797	PF13847	Methyltransferase domain
AK40_799	PF09295	ChAPs (Chs5p-Arf1p-binding proteins)
AK40_799	PF13181	Tetratricopeptide repeat
AK40_799	PF13432	Tetratricopeptide repeat
AK40_799	PF13529	Peptidase_C39 like family
AK40_8	PF00266	Aminotransferase class-V
AK40_80	PF00205	Thiamine pyrophosphate enzyme, central domain
AK40_80	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AK40_80	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AK40_800	PF00133	tRNA synthetases class I (I, L, M and V)
AK40_800	PF08264	Anticodon-binding domain of tRNA
AK40_801	PF02128	Fungalysin metallopeptidase (M36)
AK40_801	PF03413	Peptidase propeptide and YPEB domain
AK40_801	PF07504	Fungalysin/Thermolysin Propeptide Motif
AK40_803	PF08245	Mur ligase middle domain
AK40_804	PF00152	tRNA synthetases class II (D, K and N)
AK40_804	PF01336	OB-fold nucleic acid binding domain
AK40_805	PF13519	von Willebrand factor type A domain
AK40_808	PF01580	FtsK/SpoIIIE family
AK40_809	PF06013	Proteins of 100 residues with WXG
AK40_81	PF01842	ACT domain
AK40_81	PF10369	Small subunit of acetolactate synthase
AK40_810	PF00069	Protein kinase domain
AK40_810	PF13432	Tetratricopeptide repeat
AK40_810	PF14559	Tetratricopeptide repeat
AK40_812	PF07179	AK40_812
AK40_813	PF06013	Proteins of 100 residues with WXG
AK40_813	PF14449	AK40_813
AK40_815	PF14096	AK40_815
AK40_817	PF00239	Resolvase, N terminal domain
AK40_817	PF07508	Recombinase
AK40_818	PF01548	AK40_818
AK40_818	PF02371	AK40_818
AK40_82	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
AK40_82	PF07991	Acetohydroxy acid isomeroreductase, catalytic domain
AK40_821	PF13930	DNA/RNA non-specific endonuclease
AK40_822	PF04634	Protein of unknown function, DUF600
AK40_823	PF13930	DNA/RNA non-specific endonuclease
AK40_824	PF04634	Protein of unknown function, DUF600
AK40_828	PF14424	AK40_828
AK40_829	PF14425	AK40_829
AK40_83	PF00682	HMGL-like
AK40_83	PF08502	LeuA allosteric (dimerisation) domain
AK40_830	PF14096	AK40_830
AK40_831	PF02595	Glycerate kinase family
AK40_832	PF00939	Sodium:sulfate symporter transmembrane region
AK40_833	PF00072	Response regulator receiver domain
AK40_833	PF00486	Transcriptional regulatory protein, C terminal
AK40_834	PF00512	His Kinase A (phospho-acceptor) domain
AK40_834	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_835	PF03413	Peptidase propeptide and YPEB domain
AK40_836	PF03413	Peptidase propeptide and YPEB domain
AK40_837	PF00209	Sodium:neurotransmitter symporter family
AK40_838	PF00561	alpha/beta hydrolase fold
AK40_839	PF06042	Bacterial protein of unknown function (DUF925)
AK40_84	PF00180	Isocitrate/isopropylmalate dehydrogenase
AK40_840	PF10997	AK40_840
AK40_841	PF13419	Haloacid dehalogenase-like hydrolase
AK40_842	PF02447	AK40_842
AK40_843	PF00465	Iron-containing alcohol dehydrogenase
AK40_844	PF01177	Asp/Glu/Hydantoin racemase
AK40_845	PF01980	Uncharacterised protein family UPF0066
AK40_846	PF00583	Acetyltransferase (GNAT) family
AK40_847	PF13242	HAD-hyrolase-like
AK40_848	PF00583	Acetyltransferase (GNAT) family
AK40_849	PF00005	ABC transporter
AK40_85	PF00330	Aconitase family (aconitate hydratase)
AK40_850	PF05975	AK40_850
AK40_851	PF14005	AK40_851
AK40_852	PF13419	Haloacid dehalogenase-like hydrolase
AK40_853	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AK40_854	PF01636	Phosphotransferase enzyme family
AK40_855	PF03572	Peptidase family S41
AK40_856	PF00144	Beta-lactamase
AK40_856	PF11954	AK40_856
AK40_857	PF05592	Bacterial alpha-L-rhamnosidase
AK40_857	PF08531	Alpha-L-rhamnosidase N-terminal domain
AK40_857	PF17389	AK40_857
AK40_857	PF17390	AK40_857
AK40_858	PF00303	Thymidylate synthase
AK40_859	PF00186	Dihydrofolate reductase
AK40_86	PF00694	Aconitase C-terminal domain
AK40_860	PF00905	Penicillin binding protein transpeptidase domain
AK40_860	PF03717	Penicillin-binding Protein dimerisation domain
AK40_860	PF05223	NTF2-like N-terminal transpeptidase domain
AK40_861	PF02525	Flavodoxin-like fold
AK40_862	PF01553	Acyltransferase
AK40_863	PF03006	AK40_863
AK40_864	PF02416	mttA/Hcf106 family
AK40_865	PF00902	Sec-independent protein translocase protein (TatC)
AK40_866	PF10751	AK40_866
AK40_867	PF02645	Uncharacterised protein, DegV family COG1307
AK40_868	PF12706	Beta-lactamase superfamily domain
AK40_869	PF02630	SCO1/SenC
AK40_87	PF13393	Histidyl-tRNA synthetase
AK40_870	PF00011	Hsp20/alpha crystallin family
AK40_871	PF00733	Asparagine synthase
AK40_871	PF13537	Glutamine amidotransferase domain
AK40_872	PF13673	Acetyltransferase (GNAT) domain
AK40_874	PF01569	PAP2 superfamily
AK40_875	PF01497	Periplasmic binding protein
AK40_876	PF01063	Aminotransferase class IV
AK40_877	PF00881	Nitroreductase family
AK40_88	PF01634	ATP phosphoribosyltransferase
AK40_880	PF00857	Isochorismatase family
AK40_881	PF00293	NUDIX domain
AK40_882	PF00011	Hsp20/alpha crystallin family
AK40_883	PF00924	Mechanosensitive ion channel
AK40_884	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_884	PF07730	Histidine kinase
AK40_884	PF13185	GAF domain
AK40_885	PF00072	Response regulator receiver domain
AK40_885	PF00196	Bacterial regulatory proteins, luxR family
AK40_886	PF01380	SIS domain
AK40_887	PF00107	Zinc-binding dehydrogenase
AK40_887	PF08240	Alcohol dehydrogenase GroES-like domain
AK40_888	PF00528	Binding-protein-dependent transport system inner membrane component
AK40_889	PF00528	Binding-protein-dependent transport system inner membrane component
AK40_89	PF00815	Histidinol dehydrogenase
AK40_890	PF00144	Beta-lactamase
AK40_891	PF05139	Erythromycin esterase
AK40_892	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
AK40_892	PF02447	AK40_892
AK40_893	PF00535	Glycosyl transferase family 2
AK40_895	PF03358	NADPH-dependent FMN reductase
AK40_896	PF07690	Major Facilitator Superfamily
AK40_897	PF02698	DUF218 domain
AK40_898	PF00005	ABC transporter
AK40_899	PF00528	Binding-protein-dependent transport system inner membrane component
AK40_899	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
AK40_9	PF03435	Saccharopine dehydrogenase
AK40_9	PF16653	AK40_9
AK40_90	PF00475	Imidazoleglycerol-phosphate dehydratase
AK40_900	PF13520	Amino acid permease
AK40_902	PF07728	AAA domain (dynein-related subfamily)
AK40_906	PF00571	CBS domain
AK40_906	PF01595	AK40_906
AK40_906	PF03471	Transporter associated domain
AK40_907	PF00171	Aldehyde dehydrogenase family
AK40_908	PF07997	Protein of unknown function (DUF1694)
AK40_909	PF00512	His Kinase A (phospho-acceptor) domain
AK40_909	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AK40_909	PF09385	Histidine kinase N terminal
AK40_91	PF00117	Glutamine amidotransferase class-I
AK40_910	PF14344	AK40_910
AK40_911	PF00202	Aminotransferase class-III
AK40_912	PF01144	Coenzyme A transferase
AK40_913	PF01144	Coenzyme A transferase
AK40_914	PF01546	Peptidase family M20/M25/M40
AK40_914	PF07687	Peptidase dimerisation domain
AK40_915	PF13527	Acetyltransferase (GNAT) domain
AK40_916	PF00158	Sigma-54 interaction domain
AK40_916	PF02954	Bacterial regulatory protein, Fis family
AK40_916	PF08448	PAS fold
AK40_917	PF12544	Lysine-2,3-aminomutase
AK40_917	PF13353	4Fe-4S single cluster domain
AK40_918	PF14122	AK40_918
AK40_919	PF06855	Protein of unknown function (DUF1250)
AK40_92	PF00977	Histidine biosynthesis protein
AK40_921	PF13067	AK40_921
AK40_922	PF14162	AK40_922
AK40_924	PF00069	Protein kinase domain
AK40_924	PF12330	Domain of unknown function (DUF3635)
AK40_925	PF07070	AK40_925
AK40_926	PF01545	Cation efflux family
AK40_926	PF16916	AK40_926
AK40_927	PF01569	PAP2 superfamily
AK40_928	PF00085	Thioredoxin
AK40_93	PF00977	Histidine biosynthesis protein
AK40_930	PF01042	Endoribonuclease L-PSP
AK40_934	PF13104	AK40_934
AK40_935	PF07452	AK40_935
AK40_936	PF13135	AK40_936
AK40_938	PF00386	C1q domain
AK40_94	PF01502	Phosphoribosyl-AMP cyclohydrolase
AK40_940	PF13616	PPIC-type PPIASE domain
AK40_943	PF08863	AK40_943
AK40_944	PF10676	AK40_944
AK40_947	PF00106	short chain dehydrogenase
AK40_949	PF01679	AK40_949
AK40_95	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
AK40_950	PF13619	AK40_950
AK40_951	PF00905	Penicillin binding protein transpeptidase domain
AK40_951	PF00912	Transglycosylase
AK40_953	PF07690	Major Facilitator Superfamily
AK40_954	PF01521	Iron-sulphur cluster biosynthesis
AK40_955	PF00285	Citrate synthase
AK40_956	PF03972	MmgE/PrpD family
AK40_957	PF13714	Phosphoenolpyruvate phosphomutase
AK40_958	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AK40_958	PF02770	Acyl-CoA dehydrogenase, middle domain
AK40_958	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AK40_959	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AK40_959	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
AK40_960	PF00171	Aldehyde dehydrogenase family
AK40_961	PF01810	AK40_961
AK40_962	PF16113	AK40_962
AK40_964	PF10763	Protein of unknown function (DUF2584)
AK40_965	PF00149	Calcineurin-like phosphoesterase
AK40_965	PF12320	Type 5 capsule protein repressor C-terminal domain
AK40_966	PF13476	AAA domain
AK40_966	PF13558	Putative exonuclease SbcCD, C subunit
AK40_969	PF13384	Homeodomain-like domain
AK40_97	PF13217	AK40_97
AK40_970	PF01022	Bacterial regulatory protein, arsR family
AK40_971	PF09953	AK40_971
AK40_972	PF07690	Major Facilitator Superfamily
AK40_973	PF13561	Enoyl-(Acyl carrier protein) reductase
AK40_974	PF00425	chorismate binding enzyme
AK40_975	PF00501	AMP-binding enzyme
AK40_975	PF13193	AMP-binding enzyme C-terminal domain
AK40_976	PF00550	Phosphopantetheine attachment site
AK40_976	PF00857	Isochorismatase family
AK40_977	PF00501	AMP-binding enzyme
AK40_977	PF00550	Phosphopantetheine attachment site
AK40_977	PF00668	Condensation domain
AK40_977	PF00975	Thioesterase domain
AK40_977	PF13193	AMP-binding enzyme C-terminal domain
AK40_978	PF03621	MbtH-like protein
AK40_979	PF07690	Major Facilitator Superfamily
AK40_98	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AK40_98	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AK40_980	PF01648	4'-phosphopantetheinyl transferase superfamily
AK40_982	PF00216	Bacterial DNA-binding protein
AK40_983	PF13030	AK40_983
AK40_984	PF05163	DinB family
AK40_985	PF00082	Subtilase family
AK40_986	PF01235	AK40_986
AK40_989	PF16291	AK40_989
AK40_99	PF01066	CDP-alcohol phosphatidyltransferase
AK40_990	PF00849	RNA pseudouridylate synthase
AK40_990	PF01479	S4 domain
AK40_991	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
AK40_991	PF02824	TGS domain
AK40_991	PF03129	Anticodon binding domain
AK40_991	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
AK40_992	PF12952	AK40_992
AK40_993	PF00005	ABC transporter
AK40_996	PF00561	alpha/beta hydrolase fold
AK40_997	PF07690	Major Facilitator Superfamily
AK40_998	PF00528	Binding-protein-dependent transport system inner membrane component
AK40_999	PF00528	Binding-protein-dependent transport system inner membrane component