locus-tag class description NT98_10 PF04328 Selenoprotein, putative NT98_1000 PF02445 Quinolinate synthetase A protein NT98_1001 PF01476 LysM domain NT98_1004 PF01022 Bacterial regulatory protein, arsR family NT98_1005 PF00892 EamA-like transporter family NT98_1007 PF01497 Periplasmic binding protein NT98_1008 PF07499 RuvA, C-terminal domain NT98_1008 PF01330 RuvA N terminal domain NT98_1009 PF17864 RuvB AAA lid domain NT98_1009 PF05491 RuvB C-terminal winged helix domain NT98_1009 PF05496 Holliday junction DNA helicase RuvB P-loop domain NT98_1010 PF11146 Protein of unknown function (DUF2905) NT98_1011 PF02547 Queuosine biosynthesis protein NT98_1012 PF01702 Queuine tRNA-ribosyltransferase NT98_1013 PF02699 Preprotein translocase subunit NT98_1015 PF04239 Protein of unknown function (DUF421) NT98_1016 PF14667 Polysaccharide biosynthesis C-terminal domain NT98_1016 PF01943 Polysaccharide biosynthesis protein NT98_1017 PF13797 Post-transcriptional regulator NT98_1018 PF02355 Protein export membrane protein NT98_1018 PF07549 SecD/SecF GG Motif NT98_1019 PF01545 Cation efflux family NT98_1019 PF16916 Dimerisation domain of Zinc Transporter NT98_102 PF01613 Flavin reductase like domain NT98_1020 PF17768 RecJ OB domain NT98_1020 PF02272 DHHA1 domain NT98_1020 PF10141 Single-strand DNA-specific exonuclease, C terminal domain NT98_1020 PF01368 DHH family NT98_1021 PF00156 Phosphoribosyl transferase domain NT98_1022 PF13291 ACT domain NT98_1022 PF02824 TGS domain NT98_1022 PF04607 Region found in RelA / SpoT proteins NT98_1023 PF02580 D-Tyr-tRNA(Tyr) deacylase NT98_1025 PF03129 Anticodon binding domain NT98_1025 PF13393 Histidyl-tRNA synthetase NT98_1026 PF02938 GAD domain NT98_1026 PF00152 tRNA synthetases class II (D, K and N) NT98_1026 PF01336 OB-fold nucleic acid binding domain NT98_1027 PF00899 ThiF family NT98_1029 PF00004 ATPase family associated with various cellular activities (AAA) NT98_1029 PF17866 AAA lid domain NT98_103 PF07681 DoxX NT98_1030 PF16193 AAA C-terminal domain NT98_1030 PF12002 MgsA AAA+ ATPase C terminal NT98_1030 PF05496 Holliday junction DNA helicase RuvB P-loop domain NT98_1031 PF02082 Transcriptional regulator NT98_1032 PF00266 Aminotransferase class-V NT98_1035 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain NT98_1035 PF14490 Helix-hairpin-helix containing domain NT98_1035 PF13538 UvrD-like helicase C-terminal domain NT98_1039 PF01594 AI-2E family transporter NT98_104 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NT98_1041 PF02272 DHHA1 domain NT98_1041 PF01411 tRNA synthetases class II (A) NT98_1041 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NT98_1042 PF06135 IreB regulatory phosphoprotein NT98_1043 PF03652 Holliday junction resolvase NT98_1044 PF06949 Protein of unknown function (DUF1292) NT98_1045 PF02618 YceG-like family NT98_1049 PF00485 Phosphoribulokinase / Uridine kinase family NT98_105 PF01451 Low molecular weight phosphotyrosine protein phosphatase NT98_1050 PF03449 Transcription elongation factor, N-terminal NT98_1050 PF01272 Transcription elongation factor, GreA/GreB, C-term NT98_1051 PF03717 Penicillin-binding Protein dimerisation domain NT98_1051 PF00905 Penicillin binding protein transpeptidase domain NT98_1054 PF08241 Methyltransferase domain NT98_1055 PF01048 Phosphorylase superfamily NT98_1056 PF00291 Pyridoxal-phosphate dependent enzyme NT98_1057 PF01053 Cys/Met metabolism PLP-dependent enzyme NT98_1058 PF00465 Iron-containing alcohol dehydrogenase NT98_1058 PF00171 Aldehyde dehydrogenase family NT98_1059 PF14143 YrhC-like protein NT98_106 PF02502 Ribose/Galactose Isomerase NT98_1060 PF01497 Periplasmic binding protein NT98_1061 PF01032 FecCD transport family NT98_1062 PF00005 ABC transporter NT98_1068 PF07681 DoxX NT98_1069 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NT98_107 PF04260 Protein of unknown function (DUF436) NT98_1071 PF00351 Biopterin-dependent aromatic amino acid hydroxylase NT98_1072 PF13860 FlgD Ig-like domain NT98_1072 PF05922 Peptidase inhibitor I9 NT98_1072 PF02225 PA domain NT98_1072 PF00082 Subtilase family NT98_108 PF00464 Serine hydroxymethyltransferase NT98_1080 PF13700 Domain of unknown function (DUF4158) NT98_1080 PF01526 Tn3 transposase DDE domain NT98_1081 PF13700 Domain of unknown function (DUF4158) NT98_1081 PF01526 Tn3 transposase DDE domain NT98_1082 PF13700 Domain of unknown function (DUF4158) NT98_1082 PF01526 Tn3 transposase DDE domain NT98_1083 PF02796 Helix-turn-helix domain of resolvase NT98_1083 PF00239 Resolvase, N terminal domain NT98_1084 PF03845 Spore germination protein NT98_1085 PF03323 Bacillus/Clostridium GerA spore germination protein NT98_1086 PF05504 Spore germination B3/ GerAC like, C-terminal NT98_1088 PF08386 TAP-like protein NT98_1088 PF00561 alpha/beta hydrolase fold NT98_1090 PF00245 Alkaline phosphatase NT98_1092 PF04607 Region found in RelA / SpoT proteins NT98_1093 PF00881 Nitroreductase family NT98_1094 PF00471 Ribosomal protein L33 NT98_1095 PF16244 Domain of unknown function (DUF4901) NT98_1097 PF04542 Sigma-70 region 2 NT98_1097 PF04545 Sigma-70, region 4 NT98_1098 PF02666 Phosphatidylserine decarboxylase NT98_11 PF07694 5TMR of 5TMR-LYT NT98_11 PF00990 Diguanylate cyclase, GGDEF domain NT98_1101 PF01926 50S ribosome-binding GTPase NT98_1102 PF01488 Shikimate / quinate 5-dehydrogenase NT98_1102 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NT98_1102 PF08501 Shikimate dehydrogenase substrate binding domain NT98_1103 PF01985 CRS1 / YhbY (CRM) domain NT98_1104 PF01467 Cytidylyltransferase-like NT98_1105 PF01966 HD domain NT98_1107 PF13649 Methyltransferase domain NT98_1108 PF03807 NADP oxidoreductase coenzyme F420-dependent NT98_1108 PF14748 Pyrroline-5-carboxylate reductase dimerisation NT98_1109 PF10531 SLBB domain NT98_111 PF03899 ATP synthase I chain NT98_1110 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NT98_1111 PF13567 Domain of unknown function (DUF4131) NT98_1111 PF00753 Metallo-beta-lactamase superfamily NT98_1111 PF03772 Competence protein NT98_1112 PF14141 YqzM-like protein NT98_1113 PF06144 DNA polymerase III, delta subunit NT98_1114 PF01649 Ribosomal protein S20 NT98_1115 PF03418 Germination protease NT98_1117 PF00679 Elongation factor G C-terminus NT98_1117 PF00009 Elongation factor Tu GTP binding domain NT98_1117 PF06421 GTP-binding protein LepA C-terminus NT98_1117 PF03144 Elongation factor Tu domain 2 NT98_1118 PF01638 HxlR-like helix-turn-helix NT98_1119 PF06969 HemN C-terminal domain NT98_1119 PF04055 Radical SAM superfamily NT98_112 PF00119 ATP synthase A chain NT98_1120 PF01628 HrcA protein C terminal domain NT98_1121 PF01025 GrpE NT98_1122 PF00012 Hsp70 protein NT98_1123 PF01556 DnaJ C terminal domain NT98_1123 PF00226 DnaJ domain NT98_1123 PF00684 DnaJ central domain NT98_1125 PF04452 RNA methyltransferase NT98_1126 PF00919 Uncharacterized protein family UPF0004 NT98_1126 PF01938 TRAM domain NT98_1126 PF04055 Radical SAM superfamily NT98_1127 PF01165 Ribosomal protein S21 NT98_1128 PF09424 Yqey-like protein NT98_1129 PF07873 YabP family NT98_113 PF00137 ATP synthase subunit C NT98_1130 PF06898 Putative stage IV sporulation protein YqfD NT98_1131 PF02562 PhoH-like protein NT98_1132 PF07698 7TM receptor with intracellular HD hydrolase NT98_1132 PF07697 7TM-HD extracellular NT98_1132 PF01966 HD domain NT98_1133 PF02130 Uncharacterized protein family UPF0054 NT98_1134 PF01219 Prokaryotic diacylglycerol kinase NT98_1135 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NT98_1136 PF07650 KH domain NT98_1136 PF01926 50S ribosome-binding GTPase NT98_1138 PF02565 Recombination protein O C terminal NT98_1138 PF11967 Recombination protein O N terminal NT98_1139 PF00571 CBS domain NT98_1139 PF08279 HTH domain NT98_114 PF00430 ATP synthase B/B' CF(0) NT98_1140 PF03618 Kinase/pyrophosphorylase NT98_1141 PF08275 DNA primase catalytic core, N-terminal domain NT98_1141 PF10410 DnaB-helicase binding domain of primase NT98_1141 PF01807 CHC2 zinc finger NT98_1142 PF03979 Sigma-70 factor, region 1.1 NT98_1142 PF00140 Sigma-70 factor, region 1.2 NT98_1142 PF04539 Sigma-70 region 3 NT98_1142 PF04545 Sigma-70, region 4 NT98_1142 PF04542 Sigma-70 region 2 NT98_1143 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NT98_1144 PF04816 tRNA (adenine(22)-N(1))-methyltransferase NT98_1145 PF01784 NIF3 (NGG1p interacting factor 3) NT98_1146 PF02401 LytB protein NT98_1148 PF00270 DEAD/DEAH box helicase NT98_1148 PF00271 Helicase conserved C-terminal domain NT98_1149 PF01261 Xylose isomerase-like TIM barrel NT98_115 PF00213 ATP synthase delta (OSCP) subunit NT98_1150 PF11116 Protein of unknown function (DUF2624) NT98_1151 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 NT98_1151 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) NT98_1152 PF00005 ABC transporter NT98_1153 PF00950 ABC 3 transport family NT98_1154 PF01475 Ferric uptake regulator family NT98_1155 PF04551 GcpE protein NT98_1159 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NT98_1159 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NT98_116 PF02874 ATP synthase alpha/beta family, beta-barrel domain NT98_116 PF00306 ATP synthase alpha/beta chain, C terminal domain NT98_116 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NT98_1160 PF07690 Major Facilitator Superfamily NT98_1162 PF12849 PBP superfamily domain NT98_1163 PF00528 Binding-protein-dependent transport system inner membrane component NT98_1164 PF00528 Binding-protein-dependent transport system inner membrane component NT98_1165 PF00005 ABC transporter NT98_1166 PF01895 PhoU domain NT98_1167 PF00483 Nucleotidyl transferase NT98_1168 PF00471 Ribosomal protein L33 NT98_1169 PF01812 5-formyltetrahydrofolate cyclo-ligase family NT98_117 PF00231 ATP synthase NT98_1170 PF06014 Bacterial protein of unknown function (DUF910) NT98_1171 PF00480 ROK family NT98_1172 PF10958 Protein of unknown function (DUF2759) NT98_1173 PF00753 Metallo-beta-lactamase superfamily NT98_1175 PF01022 Bacterial regulatory protein, arsR family NT98_1177 PF01053 Cys/Met metabolism PLP-dependent enzyme NT98_1178 PF01053 Cys/Met metabolism PLP-dependent enzyme NT98_1179 PF02574 Homocysteine S-methyltransferase NT98_1179 PF02219 Methylenetetrahydrofolate reductase NT98_118 PF02874 ATP synthase alpha/beta family, beta-barrel domain NT98_118 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NT98_1180 PF02965 Vitamin B12 dependent methionine synthase, activation domain NT98_1180 PF02574 Homocysteine S-methyltransferase NT98_1180 PF02607 B12 binding domain NT98_1180 PF02310 B12 binding domain NT98_1180 PF00809 Pterin binding enzyme NT98_1181 PF04101 Glycosyltransferase family 28 C-terminal domain NT98_1181 PF03033 Glycosyltransferase family 28 N-terminal domain NT98_1188 PF00375 Sodium:dicarboxylate symporter family NT98_1189 PF11117 Protein of unknown function (DUF2626) NT98_119 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NT98_119 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain NT98_1191 PF00437 Type II/IV secretion system protein NT98_1193 PF01609 Transposase DDE domain NT98_1194 PF01609 Transposase DDE domain NT98_1195 PF00482 Type II secretion system (T2SS), protein F NT98_1197 PF07963 Prokaryotic N-terminal methylation motif NT98_12 PF08543 Phosphomethylpyrimidine kinase NT98_1202 PF01202 Shikimate kinase NT98_1203 PF14038 YqzE-like protein NT98_1209 PF11079 Bacterial protein YqhG of unknown function NT98_1210 PF00176 SNF2 family N-terminal domain NT98_1210 PF00271 Helicase conserved C-terminal domain NT98_1211 PF08669 Glycine cleavage T-protein C-terminal barrel domain NT98_1211 PF01571 Aminomethyltransferase folate-binding domain NT98_1212 PF02347 Glycine cleavage system P-protein NT98_1213 PF02347 Glycine cleavage system P-protein NT98_1216 PF00392 Bacterial regulatory proteins, gntR family NT98_1217 PF00005 ABC transporter NT98_122 PF00990 Diguanylate cyclase, GGDEF domain NT98_122 PF00563 EAL domain NT98_122 PF03707 Bacterial signalling protein N terminal repeat NT98_1224 PF00893 Small Multidrug Resistance protein NT98_1225 PF00893 Small Multidrug Resistance protein NT98_1227 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NT98_1227 PF00356 Bacterial regulatory proteins, lacI family NT98_1229 PF00581 Rhodanese-like domain NT98_123 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 NT98_1230 PF03099 Biotin/lipoate A/B protein ligase family NT98_1234 PF01609 Transposase DDE domain NT98_1237 PF02742 Iron dependent repressor, metal binding and dimerisation domain NT98_1237 PF01325 Iron dependent repressor, N-terminal DNA binding domain NT98_1239 PF13419 Haloacid dehalogenase-like hydrolase NT98_124 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NT98_1240 PF07136 Protein of unknown function (DUF1385) NT98_1241 PF11085 Conserved membrane protein YqhR NT98_1242 PF01220 Dehydroquinase class II NT98_1243 PF00557 Metallopeptidase family M24 NT98_1243 PF01321 Creatinase/Prolidase N-terminal domain NT98_1244 PF08207 Elongation factor P (EF-P) KOW-like domain NT98_1244 PF01132 Elongation factor P (EF-P) OB domain NT98_1244 PF09285 Elongation factor P, C-terminal NT98_1249 PF09548 Stage III sporulation protein AB (spore_III_AB) NT98_125 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NT98_1250 PF06686 Stage III sporulation protein AC/AD protein family NT98_1251 PF06686 Stage III sporulation protein AC/AD protein family NT98_1252 PF09546 Stage III sporulation protein AE (spore_III_AE) NT98_1253 PF09581 Stage III sporulation protein AF (Spore_III_AF) NT98_1255 PF12685 SpoIIIAH-like protein NT98_1257 PF00364 Biotin-requiring enzyme NT98_1258 PF00289 Biotin carboxylase, N-terminal domain NT98_1258 PF02785 Biotin carboxylase C-terminal domain NT98_1258 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NT98_1259 PF03780 Asp23 family, cell envelope-related function NT98_126 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NT98_1260 PF01029 NusB family NT98_1261 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NT98_1261 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NT98_1262 PF13742 OB-fold nucleic acid binding domain NT98_1262 PF02601 Exonuclease VII, large subunit NT98_1263 PF02609 Exonuclease VII small subunit NT98_1264 PF00348 Polyprenyl synthetase NT98_1265 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NT98_1265 PF02780 Transketolase, C-terminal domain NT98_1265 PF02779 Transketolase, pyrimidine binding domain NT98_1266 PF01728 FtsJ-like methyltransferase NT98_1266 PF01479 S4 domain NT98_1267 PF01316 Arginine repressor, DNA binding domain NT98_1267 PF02863 Arginine repressor, C-terminal domain NT98_1268 PF13476 AAA domain NT98_1269 PF05580 SpoIVB peptidase S55 NT98_1269 PF17820 PDZ domain NT98_127 PF00146 NADH dehydrogenase NT98_1270 PF00072 Response regulator receiver domain NT98_1270 PF08769 Sporulation initiation factor Spo0A C terminal NT98_1273 PF01609 Transposase DDE domain NT98_1274 PF01609 Transposase DDE domain NT98_1275 PF01609 Transposase DDE domain NT98_1276 PF01609 Transposase DDE domain NT98_1279 PF01609 Transposase DDE domain NT98_1282 PF01609 Transposase DDE domain NT98_1287 PF09397 Ftsk gamma domain NT98_1287 PF01580 FtsK/SpoIIIE family NT98_1287 PF13491 4TM region of DNA translocase FtsK/SpoIIIE NT98_1287 PF17854 FtsK alpha domain NT98_129 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 NT98_13 PF13185 GAF domain NT98_13 PF07730 Histidine kinase NT98_130 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NT98_1306 PF00437 Type II/IV secretion system protein NT98_131 PF00361 Proton-conducting membrane transporter NT98_131 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NT98_131 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus NT98_132 PF00361 Proton-conducting membrane transporter NT98_133 PF00361 Proton-conducting membrane transporter NT98_1330 PF10087 Uncharacterized protein conserved in bacteria (DUF2325) NT98_1333 PF04235 Protein of unknown function (DUF418) NT98_1338 PF00395 S-layer homology domain NT98_1339 PF01569 PAP2 superfamily NT98_134 PF06612 Protein of unknown function (DUF1146) NT98_1341 PF00535 Glycosyl transferase family 2 NT98_1342 PF00483 Nucleotidyl transferase NT98_1343 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NT98_1343 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NT98_1343 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NT98_1345 PF13276 HTH-like domain NT98_1345 PF00665 Integrase core domain NT98_1345 PF13333 Integrase core domain NT98_1351 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain NT98_1351 PF03497 Anthrax toxin LF subunit NT98_1352 PF00156 Phosphoribosyl transferase domain NT98_1355 PF00874 PRD domain NT98_1355 PF05043 Mga helix-turn-helix domain NT98_1355 PF08279 HTH domain NT98_1356 PF09385 Histidine kinase N terminal NT98_136 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NT98_1360 PF13700 Domain of unknown function (DUF4158) NT98_1360 PF01526 Tn3 transposase DDE domain NT98_1361 PF13700 Domain of unknown function (DUF4158) NT98_1361 PF01526 Tn3 transposase DDE domain NT98_1362 PF02796 Helix-turn-helix domain of resolvase NT98_1362 PF00239 Resolvase, N terminal domain NT98_1363 PF03845 Spore germination protein NT98_1364 PF03323 Bacillus/Clostridium GerA spore germination protein NT98_1365 PF05504 Spore germination B3/ GerAC like, C-terminal NT98_1366 PF05504 Spore germination B3/ GerAC like, C-terminal NT98_1368 PF03495 Clostridial binary toxin B/anthrax toxin PA Ca-binding domain NT98_1368 PF17476 Clostridial binary toxin B/anthrax toxin PA domain 3 NT98_1368 PF17475 Clostridial binary toxin B/anthrax toxin PA domain 2 NT98_1368 PF07691 PA14 domain NT98_1369 PF01022 Bacterial regulatory protein, arsR family NT98_137 PF08486 Stage II sporulation protein NT98_1373 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain NT98_1373 PF09156 Anthrax toxin lethal factor, middle domain NT98_1376 PF18277 AbrB C-terminal domain NT98_1376 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin NT98_1378 PF02899 Phage integrase, N-terminal SAM-like domain NT98_1378 PF00589 Phage integrase family NT98_138 PF13193 AMP-binding enzyme C-terminal domain NT98_138 PF00501 AMP-binding enzyme NT98_1386 PF04740 LXG domain of WXG superfamily NT98_1386 PF14436 Bacterial EndoU nuclease NT98_1388 PF13276 HTH-like domain NT98_1388 PF00665 Integrase core domain NT98_1388 PF13333 Integrase core domain NT98_1389 PF13276 HTH-like domain NT98_1389 PF00665 Integrase core domain NT98_1389 PF13333 Integrase core domain NT98_139 PF04397 LytTr DNA-binding domain NT98_139 PF00072 Response regulator receiver domain NT98_1390 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment NT98_1392 PF00589 Phage integrase family NT98_1397 PF18801 response regulator aspartate phosphatase H, N terminal NT98_1399 PF17209 Hfq protein NT98_14 PF00072 Response regulator receiver domain NT98_14 PF00196 Bacterial regulatory proteins, luxR family NT98_140 PF00005 ABC transporter NT98_1400 PF01022 Bacterial regulatory protein, arsR family NT98_1401 PF02600 Disulfide bond formation protein DsbB NT98_1404 PF00565 Staphylococcal nuclease homologue NT98_1405 PF00565 Staphylococcal nuclease homologue NT98_1407 PF13342 C-terminal repeat of topoisomerase NT98_1407 PF01751 Toprim domain NT98_1407 PF01131 DNA topoisomerase NT98_1409 PF08378 Nuclease-related domain NT98_1416 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NT98_142 PF01551 Peptidase family M23 NT98_143 PF14883 Hypothetical glycosyl hydrolase family 13 NT98_143 PF01522 Polysaccharide deacetylase NT98_1436 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NT98_144 PF12116 Stage III sporulation protein D NT98_1447 PF01609 Transposase DDE domain NT98_1448 PF01609 Transposase DDE domain NT98_1449 PF01609 Transposase DDE domain NT98_1450 PF01609 Transposase DDE domain NT98_1456 PF01609 Transposase DDE domain NT98_1457 PF01609 Transposase DDE domain NT98_1458 PF01609 Transposase DDE domain NT98_1459 PF01609 Transposase DDE domain NT98_146 PF01467 Cytidylyltransferase-like NT98_1462 PF01609 Transposase DDE domain NT98_1465 PF01609 Transposase DDE domain NT98_147 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase NT98_1470 PF14174 YycC-like protein NT98_1471 PF03009 Glycerophosphoryl diester phosphodiesterase family NT98_1473 PF00158 Sigma-54 interaction domain NT98_1473 PF02954 Bacterial regulatory protein, Fis family NT98_1473 PF00989 PAS fold NT98_1474 PF01515 Phosphate acetyl/butaryl transferase NT98_1475 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NT98_1475 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NT98_1476 PF00871 Acetokinase family NT98_1477 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NT98_1477 PF07992 Pyridine nucleotide-disulphide oxidoreductase NT98_1478 PF00676 Dehydrogenase E1 component NT98_1479 PF02779 Transketolase, pyrimidine binding domain NT98_1479 PF02780 Transketolase, C-terminal domain NT98_148 PF00535 Glycosyl transferase family 2 NT98_148 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase NT98_1480 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NT98_1480 PF00364 Biotin-requiring enzyme NT98_1480 PF02817 e3 binding domain NT98_1481 PF01098 Cell cycle protein NT98_1482 PF04239 Protein of unknown function (DUF421) NT98_1483 PF09297 NADH pyrophosphatase zinc ribbon domain NT98_1483 PF00293 NUDIX domain NT98_1484 PF11208 Protein of unknown function (DUF2992) NT98_1485 PF06491 Disulphide isomerase NT98_1486 PF00497 Bacterial extracellular solute-binding proteins, family 3 NT98_1487 PF00528 Binding-protein-dependent transport system inner membrane component NT98_1488 PF00005 ABC transporter NT98_1489 PF11728 Putative aromatic acid exporter C-terminal domain NT98_1489 PF06081 Aromatic acid exporter family member 1 NT98_149 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase NT98_1490 PF03734 L,D-transpeptidase catalytic domain NT98_1492 PF13302 Acetyltransferase (GNAT) domain NT98_1493 PF01546 Peptidase family M20/M25/M40 NT98_1493 PF07687 Peptidase dimerisation domain NT98_1495 PF11798 IMS family HHH motif NT98_1495 PF11799 impB/mucB/samB family C-terminal domain NT98_1495 PF00817 impB/mucB/samB family NT98_1496 PF02308 MgtC family NT98_1497 PF00689 Cation transporting ATPase, C-terminus NT98_1497 PF00690 Cation transporter/ATPase, N-terminus NT98_1499 PF12706 Beta-lactamase superfamily domain NT98_1499 PF00753 Metallo-beta-lactamase superfamily NT98_15 PF02525 Flavodoxin-like fold NT98_150 PF01061 ABC-2 type transporter NT98_1500 PF01842 ACT domain NT98_1500 PF03315 Serine dehydratase beta chain NT98_1501 PF03313 Serine dehydratase alpha chain NT98_1502 PF03807 NADP oxidoreductase coenzyme F420-dependent NT98_1502 PF14748 Pyrroline-5-carboxylate reductase dimerisation NT98_1503 PF00753 Metallo-beta-lactamase superfamily NT98_1504 PF00106 short chain dehydrogenase NT98_1506 PF02774 Semialdehyde dehydrogenase, dimerisation domain NT98_1506 PF01118 Semialdehyde dehydrogenase, NAD binding domain NT98_1507 PF01960 ArgJ family NT98_1508 PF00696 Amino acid kinase family NT98_1509 PF00202 Aminotransferase class-III NT98_151 PF08239 Bacterial SH3 domain NT98_151 PF00005 ABC transporter NT98_1510 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NT98_1510 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NT98_1513 PF13404 AsnC-type helix-turn-helix domain NT98_1513 PF01037 Lrp/AsnC ligand binding domain NT98_1515 PF02872 5'-nucleotidase, C-terminal domain NT98_1515 PF00149 Calcineurin-like phosphoesterase NT98_1518 PF00202 Aminotransferase class-III NT98_1520 PF00155 Aminotransferase class I and II NT98_1521 PF08241 Methyltransferase domain NT98_1521 PF12697 Alpha/beta hydrolase family NT98_1522 PF13847 Methyltransferase domain NT98_1523 PF06968 Biotin and Thiamin Synthesis associated domain NT98_1523 PF04055 Radical SAM superfamily NT98_1525 PF00885 6,7-dimethyl-8-ribityllumazine synthase NT98_1526 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NT98_1526 PF00925 GTP cyclohydrolase II NT98_1527 PF00677 Lumazine binding domain NT98_1528 PF01872 RibD C-terminal domain NT98_1528 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NT98_153 PF02350 UDP-N-acetylglucosamine 2-epimerase NT98_1530 PF10827 Protein of unknown function (DUF2552) NT98_1531 PF12146 Serine aminopeptidase, S33 NT98_1532 PF00583 Acetyltransferase (GNAT) family NT98_1533 PF00356 Bacterial regulatory proteins, lacI family NT98_1534 PF13726 Na+-H+ antiporter family NT98_1534 PF03553 Na+/H+ antiporter family NT98_1535 PF12146 Serine aminopeptidase, S33 NT98_1537 PF02872 5'-nucleotidase, C-terminal domain NT98_1537 PF00565 Staphylococcal nuclease homologue NT98_1537 PF00149 Calcineurin-like phosphoesterase NT98_1537 PF00746 LPXTG cell wall anchor motif NT98_1539 PF04229 GrpB protein NT98_1539 PF13673 Acetyltransferase (GNAT) domain NT98_154 PF07977 FabA-like domain NT98_1540 PF00248 Aldo/keto reductase family NT98_1541 PF00248 Aldo/keto reductase family NT98_1542 PF13072 Mother cell inhibitor of FtsZ NT98_1543 PF00293 NUDIX domain NT98_1545 PF01944 Stage II sporulation protein M NT98_1546 PF01475 Ferric uptake regulator family NT98_1547 PF14004 Protein of unknown function (DUF4227) NT98_1548 PF00589 Phage integrase family NT98_1548 PF02899 Phage integrase, N-terminal SAM-like domain NT98_1549 PF13115 YtkA-like NT98_155 PF03816 Cell envelope-related transcriptional attenuator domain NT98_1550 PF01676 Metalloenzyme superfamily NT98_1551 PF01048 Phosphorylase superfamily NT98_1552 PF02885 Glycosyl transferase family, helical bundle domain NT98_1552 PF00591 Glycosyl transferase family, a/b domain NT98_1552 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain NT98_1553 PF01544 CorA-like Mg2+ transporter protein NT98_1554 PF00860 Permease family NT98_1556 PF01047 MarR family NT98_1560 PF00005 ABC transporter NT98_1561 PF00392 Bacterial regulatory proteins, gntR family NT98_1562 PF07943 Penicillin-binding protein 5, C-terminal domain NT98_1562 PF00768 D-alanyl-D-alanine carboxypeptidase NT98_1563 PF01740 STAS domain NT98_1564 PF13581 Histidine kinase-like ATPase domain NT98_1565 PF04542 Sigma-70 region 2 NT98_1565 PF04545 Sigma-70, region 4 NT98_1565 PF04539 Sigma-70 region 3 NT98_1566 PF00209 Sodium:neurotransmitter symporter family NT98_1568 PF12164 Stage V sporulation protein AA NT98_1569 PF13782 Stage V sporulation protein AB NT98_157 PF16363 GDP-mannose 4,6 dehydratase NT98_1570 PF03862 SpoVAC/SpoVAEB sporulation membrane protein NT98_1571 PF07451 Stage V sporulation protein AD (SpoVAD) NT98_1572 PF03862 SpoVAC/SpoVAEB sporulation membrane protein NT98_1573 PF14097 Stage V sporulation protein AE1 NT98_1574 PF03323 Bacillus/Clostridium GerA spore germination protein NT98_1576 PF06207 Protein of unknown function (DUF1002) NT98_1577 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NT98_1578 PF00583 Acetyltransferase (GNAT) family NT98_1579 PF03745 Domain of unknown function (DUF309) NT98_158 PF00072 Response regulator receiver domain NT98_158 PF00486 Transcriptional regulatory protein, C terminal NT98_1581 PF02616 Segregation and condensation protein ScpA NT98_1582 PF04079 Segregation and condensation complex subunit ScpB NT98_1584 PF01979 Amidohydrolase family NT98_1585 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NT98_1588 PF03123 CAT RNA binding domain NT98_1588 PF00874 PRD domain NT98_1589 PF02378 Phosphotransferase system, EIIC NT98_1589 PF00367 phosphotransferase system, EIIB NT98_1589 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NT98_159 PF18719 ArlS sensor domain NT98_159 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_159 PF00512 His Kinase A (phospho-acceptor) domain NT98_1590 PF00381 PTS HPr component phosphorylation site NT98_1591 PF00391 PEP-utilising enzyme, mobile domain NT98_1591 PF02896 PEP-utilising enzyme, TIM barrel domain NT98_1591 PF05524 PEP-utilising enzyme, N-terminal NT98_1594 PF00881 Nitroreductase family NT98_1595 PF00990 Diguanylate cyclase, GGDEF domain NT98_1596 PF00144 Beta-lactamase NT98_1597 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NT98_1597 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NT98_16 PF00027 Cyclic nucleotide-binding domain NT98_1600 PF03079 ARD/ARD' family NT98_1601 PF00596 Class II Aldolase and Adducin N-terminal domain NT98_1603 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain NT98_1603 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain NT98_1604 PF00155 Aminotransferase class I and II NT98_1605 PF00795 Carbon-nitrogen hydrolase NT98_1606 PF01636 Phosphotransferase enzyme family NT98_1607 PF01008 Initiation factor 2 subunit family NT98_1610 PF03551 Transcriptional regulator PadR-like family NT98_1616 PF00293 NUDIX domain NT98_1617 PF02803 Thiolase, C-terminal domain NT98_1617 PF00108 Thiolase, N-terminal domain NT98_1618 PF02463 RecF/RecN/SMC N terminal domain NT98_162 PF07690 Major Facilitator Superfamily NT98_1625 PF00005 ABC transporter NT98_1625 PF17912 MalK OB fold domain NT98_1625 PF03459 TOBE domain NT98_1626 PF00128 Alpha amylase, catalytic domain NT98_1626 PF16657 Maltogenic Amylase, C-terminal domain NT98_1627 PF00128 Alpha amylase, catalytic domain NT98_1627 PF02903 Alpha amylase, N-terminal ig-like domain NT98_1627 PF16657 Maltogenic Amylase, C-terminal domain NT98_1628 PF13416 Bacterial extracellular solute-binding protein NT98_1629 PF00528 Binding-protein-dependent transport system inner membrane component NT98_163 PF01385 Probable transposase NT98_163 PF07282 Putative transposase DNA-binding domain NT98_163 PF12323 Helix-turn-helix domain NT98_1630 PF00528 Binding-protein-dependent transport system inner membrane component NT98_1631 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NT98_1631 PF00356 Bacterial regulatory proteins, lacI family NT98_1632 PF00155 Aminotransferase class I and II NT98_1634 PF00512 His Kinase A (phospho-acceptor) domain NT98_1634 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_1636 PF14040 Deoxyribonuclease NucA/NucB NT98_1638 PF08267 Cobalamin-independent synthase, N-terminal domain NT98_1638 PF01717 Cobalamin-independent synthase, Catalytic domain NT98_1639 PF13344 Haloacid dehalogenase-like hydrolase NT98_1639 PF00293 NUDIX domain NT98_1641 PF01385 Probable transposase NT98_1641 PF07282 Putative transposase DNA-binding domain NT98_1641 PF12323 Helix-turn-helix domain NT98_1644 PF07690 Major Facilitator Superfamily NT98_165 PF00005 ABC transporter NT98_1650 PF14177 YkyB-like protein NT98_1651 PF02541 Ppx/GppA phosphatase family NT98_1652 PF17941 Polyphosphate kinase C-terminal domain 1 NT98_1652 PF13090 Polyphosphate kinase C-terminal domain 2 NT98_1652 PF13089 Polyphosphate kinase N-terminal domain NT98_1652 PF02503 Polyphosphate kinase middle domain NT98_1654 PF10518 TAT (twin-arginine translocation) pathway signal sequence NT98_1654 PF00149 Calcineurin-like phosphoesterase NT98_1656 PF00563 EAL domain NT98_1656 PF10388 EAL-domain associated signalling protein domain NT98_1659 PF08796 Protein of unknown function (DUF1797) NT98_166 PF02687 FtsX-like permease family NT98_166 PF12704 MacB-like periplasmic core domain NT98_1661 PF04308 Ribonuclease H-like NT98_1664 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NT98_1664 PF03466 LysR substrate binding domain NT98_1665 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal NT98_1665 PF00132 Bacterial transferase hexapeptide (six repeats) NT98_1665 PF14602 Hexapeptide repeat of succinyl-transferase NT98_1666 PF07687 Peptidase dimerisation domain NT98_1666 PF01546 Peptidase family M20/M25/M40 NT98_1668 PF02080 TrkA-C domain NT98_1668 PF02254 TrkA-N domain NT98_1669 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NT98_1669 PF17770 Ribonuclease J C-terminal domain NT98_1669 PF00753 Metallo-beta-lactamase superfamily NT98_167 PF04893 Yip1 domain NT98_1672 PF01327 Polypeptide deformylase NT98_1674 PF00676 Dehydrogenase E1 component NT98_1675 PF02779 Transketolase, pyrimidine binding domain NT98_1675 PF02780 Transketolase, C-terminal domain NT98_1676 PF02817 e3 binding domain NT98_1676 PF00364 Biotin-requiring enzyme NT98_1676 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NT98_1677 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NT98_1677 PF07992 Pyridine nucleotide-disulphide oxidoreductase NT98_168 PF04893 Yip1 domain NT98_1685 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain NT98_1685 PF01276 Orn/Lys/Arg decarboxylase, major domain NT98_1686 PF05256 Uncharacterised protein family (UPF0223) NT98_1687 PF06335 Protein of unknown function (DUF1054) NT98_1689 PF00459 Inositol monophosphatase family NT98_169 PF04542 Sigma-70 region 2 NT98_169 PF04545 Sigma-70, region 4 NT98_1692 PF14036 YlaH-like protein NT98_1694 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) NT98_1696 PF13638 PIN domain NT98_1696 PF02562 PhoH-like protein NT98_1698 PF07408 Protein of unknown function (DUF1507) NT98_1699 PF01098 Cell cycle protein NT98_17 PF13419 Haloacid dehalogenase-like hydrolase NT98_1700 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NT98_1700 PF00682 HMGL-like NT98_1700 PF00289 Biotin carboxylase, N-terminal domain NT98_1700 PF00364 Biotin-requiring enzyme NT98_1700 PF02436 Conserved carboxylase domain NT98_1700 PF02785 Biotin carboxylase C-terminal domain NT98_1701 PF02628 Cytochrome oxidase assembly protein NT98_1702 PF01040 UbiA prenyltransferase family NT98_1703 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NT98_1703 PF02790 Cytochrome C oxidase subunit II, transmembrane domain NT98_1703 PF00034 Cytochrome c NT98_1704 PF00115 Cytochrome C and Quinol oxidase polypeptide I NT98_1705 PF00510 Cytochrome c oxidase subunit III NT98_1706 PF03626 Prokaryotic Cytochrome C oxidase subunit IV NT98_1707 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) NT98_1708 PF08868 YugN-like family NT98_1709 PF14504 CAP-associated N-terminal NT98_1709 PF00188 Cysteine-rich secretory protein family NT98_1710 PF14071 Putative coat protein NT98_1711 PF14003 YlbE-like protein NT98_1712 PF00300 Histidine phosphatase superfamily (branch 1) NT98_1713 PF06133 Control of competence regulator ComK, YlbF/YmcA NT98_1714 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) NT98_1717 PF07670 Nucleoside recognition NT98_1718 PF01467 Cytidylyltransferase-like NT98_1719 PF01734 Patatin-like phospholipase NT98_1720 PF13180 PDZ domain NT98_1720 PF05362 Lon protease (S16) C-terminal proteolytic domain NT98_1721 PF05636 HIGH Nucleotidyl Transferase NT98_1722 PF02620 Large ribosomal RNA subunit accumulation protein YceD NT98_1723 PF01783 Ribosomal L32p protein family NT98_1725 PF00583 Acetyltransferase (GNAT) family NT98_1726 PF02558 Ketopantoate reductase PanE/ApbA NT98_1726 PF08546 Ketopantoate reductase PanE/ApbA C terminal NT98_1727 PF10079 Bacillithiol biosynthesis BshC NT98_1728 PF01795 MraW methylase family NT98_1729 PF04977 Septum formation initiator NT98_1731 PF03793 PASTA domain NT98_1731 PF03717 Penicillin-binding Protein dimerisation domain NT98_1731 PF00905 Penicillin binding protein transpeptidase domain NT98_1732 PF02875 Mur ligase family, glutamate ligase domain NT98_1732 PF08245 Mur ligase middle domain NT98_1732 PF01225 Mur ligase family, catalytic domain NT98_1733 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 NT98_1733 PF00953 Glycosyl transferase family 4 NT98_1734 PF02875 Mur ligase family, glutamate ligase domain NT98_1734 PF08245 Mur ligase middle domain NT98_1735 PF01098 Cell cycle protein NT98_1736 PF04101 Glycosyltransferase family 28 C-terminal domain NT98_1736 PF03033 Glycosyltransferase family 28 N-terminal domain NT98_1737 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NT98_1737 PF01565 FAD binding domain NT98_1738 PF08478 POTRA domain, FtsQ-type NT98_1738 PF03799 Cell division protein FtsQ NT98_1739 PF02491 SHS2 domain inserted in FTSA NT98_1740 PF12327 FtsZ family, C-terminal domain NT98_1740 PF00091 Tubulin/FtsZ family, GTPase domain NT98_1741 PF03419 Sporulation factor SpoIIGA NT98_1742 PF04542 Sigma-70 region 2 NT98_1742 PF04545 Sigma-70, region 4 NT98_1743 PF04542 Sigma-70 region 2 NT98_1743 PF04539 Sigma-70 region 3 NT98_1743 PF04545 Sigma-70, region 4 NT98_1744 PF05239 PRC-barrel domain NT98_1746 PF01168 Alanine racemase, N-terminal domain NT98_1747 PF04472 Cell division protein SepF NT98_1748 PF02325 YGGT family NT98_1749 PF01479 S4 domain NT98_1749 PF17774 Putative RNA-binding domain in YlmH NT98_175 PF12419 SNF2 Helicase protein NT98_175 PF00176 SNF2 family N-terminal domain NT98_175 PF00271 Helicase conserved C-terminal domain NT98_1750 PF05103 DivIVA protein NT98_1751 PF06827 Zinc finger found in FPG and IleRS NT98_1751 PF08264 Anticodon-binding domain of tRNA NT98_1751 PF00133 tRNA synthetases class I (I, L, M and V) NT98_1753 PF01252 Signal peptidase (SPase) II NT98_1754 PF00849 RNA pseudouridylate synthase NT98_1754 PF01479 S4 domain NT98_1755 PF00156 Phosphoribosyl transferase domain NT98_1756 PF00860 Permease family NT98_1757 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NT98_1757 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NT98_1758 PF01979 Amidohydrolase family NT98_1759 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NT98_1759 PF00117 Glutamine amidotransferase class-I NT98_176 PF04434 SWIM zinc finger NT98_1760 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NT98_1760 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NT98_1760 PF02142 MGS-like domain NT98_1761 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B NT98_1761 PF00175 Oxidoreductase NAD-binding domain NT98_1762 PF01180 Dihydroorotate dehydrogenase NT98_1763 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NT98_1764 PF00156 Phosphoribosyl transferase domain NT98_1769 PF01321 Creatinase/Prolidase N-terminal domain NT98_1769 PF00557 Metallopeptidase family M24 NT98_1772 PF00689 Cation transporting ATPase, C-terminus NT98_1772 PF00690 Cation transporter/ATPase, N-terminus NT98_1773 PF08340 Domain of unknown function (DUF1732) NT98_1773 PF03755 YicC-like family, N-terminal region NT98_1774 PF04025 Domain of unknown function (DUF370) NT98_1775 PF00625 Guanylate kinase NT98_1776 PF01192 RNA polymerase Rpb6 NT98_1777 PF02441 Flavoprotein NT98_1777 PF04127 DNA / pantothenate metabolism flavoprotein NT98_1778 PF17764 3′ DNA-binding domain (3′BD) NT98_1778 PF18074 Primosomal protein N C-terminal domain NT98_1778 PF04851 Type III restriction enzyme, res subunit NT98_1778 PF18319 PriA DNA helicase Cys-rich region (CRR) domain NT98_1778 PF00271 Helicase conserved C-terminal domain NT98_1779 PF01327 Polypeptide deformylase NT98_1780 PF00551 Formyl transferase NT98_1780 PF02911 Formyl transferase, C-terminal domain NT98_1781 PF01189 16S rRNA methyltransferase RsmB/F NT98_1781 PF01029 NusB family NT98_1782 PF04055 Radical SAM superfamily NT98_1784 PF03793 PASTA domain NT98_1784 PF00069 Protein kinase domain NT98_1785 PF16745 RsgA N-terminal domain NT98_1785 PF03193 RsgA GTPase NT98_1786 PF00834 Ribulose-phosphate 3 epimerase family NT98_1787 PF04263 Thiamin pyrophosphokinase, catalytic domain NT98_1787 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain NT98_1788 PF00830 Ribosomal L28 family NT98_1789 PF03780 Asp23 family, cell envelope-related function NT98_1790 PF02734 DAK2 domain NT98_1790 PF13684 Dihydroxyacetone kinase family NT98_1791 PF00270 DEAD/DEAH box helicase NT98_1791 PF00271 Helicase conserved C-terminal domain NT98_1791 PF17191 RecG wedge domain NT98_1792 PF03061 Thioesterase superfamily NT98_1793 PF02504 Fatty acid synthesis protein NT98_1794 PF00698 Acyl transferase domain NT98_1796 PF00550 Phosphopantetheine attachment site NT98_1797 PF14622 Ribonuclease-III-like NT98_1797 PF00035 Double-stranded RNA binding motif NT98_1798 PF02463 RecF/RecN/SMC N terminal domain NT98_1798 PF06470 SMC proteins Flexible Hinge Domain NT98_1799 PF00448 SRP54-type protein, GTPase domain NT98_1799 PF02881 SRP54-type protein, helical bundle domain NT98_1800 PF04297 Putative helix-turn-helix protein, YlxM / p13 like NT98_1801 PF02881 SRP54-type protein, helical bundle domain NT98_1801 PF02978 Signal peptide binding domain NT98_1801 PF00448 SRP54-type protein, GTPase domain NT98_1802 PF00886 Ribosomal protein S16 NT98_1804 PF01782 RimM N-terminal domain NT98_1804 PF05239 PRC-barrel domain NT98_1805 PF01746 tRNA (Guanine-1)-methyltransferase NT98_1806 PF01245 Ribosomal protein L19 NT98_1807 PF10502 Signal peptidase, peptidase S26 NT98_1808 PF01926 50S ribosome-binding GTPase NT98_1809 PF01351 Ribonuclease HII NT98_181 PF06725 3D domain NT98_181 PF01476 LysM domain NT98_1810 PF08442 ATP-grasp domain NT98_1810 PF00549 CoA-ligase NT98_1811 PF02629 CoA binding domain NT98_1811 PF00549 CoA-ligase NT98_1812 PF02481 DNA recombination-mediator protein A NT98_1813 PF01131 DNA topoisomerase NT98_1813 PF01751 Toprim domain NT98_1813 PF01396 Topoisomerase DNA binding C4 zinc finger NT98_1814 PF01134 Glucose inhibited division protein A NT98_1815 PF02899 Phage integrase, N-terminal SAM-like domain NT98_1815 PF00589 Phage integrase family NT98_1816 PF00227 Proteasome subunit NT98_1817 PF00004 ATPase family associated with various cellular activities (AAA) NT98_1817 PF10431 C-terminal, D2-small domain, of ClpB protein NT98_1817 PF07724 AAA domain (Cdc48 subfamily) NT98_1818 PF08222 CodY helix-turn-helix domain NT98_1818 PF06018 CodY GAF-like domain NT98_1819 PF00318 Ribosomal protein S2 NT98_182 PF02028 BCCT, betaine/carnitine/choline family transporter NT98_1820 PF00889 Elongation factor TS NT98_1821 PF00696 Amino acid kinase family NT98_1822 PF01765 Ribosome recycling factor NT98_1823 PF01255 Putative undecaprenyl diphosphate synthase NT98_1825 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NT98_1825 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NT98_1825 PF13288 DXP reductoisomerase C-terminal domain NT98_1826 PF02163 Peptidase family M50 NT98_1826 PF17820 PDZ domain NT98_1827 PF03129 Anticodon binding domain NT98_1827 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NT98_1827 PF04073 Aminoacyl-tRNA editing domain NT98_1828 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NT98_1828 PF11490 DNA polymerase III polC-type N-terminus II NT98_1828 PF14579 Helix-hairpin-helix motif NT98_1828 PF14480 DNA polymerase III polC-type N-terminus I NT98_1828 PF02811 PHP domain NT98_1828 PF00929 Exonuclease NT98_1828 PF07733 Bacterial DNA polymerase III alpha NTPase domain NT98_1829 PF17384 RimP C-terminal SH3 domain NT98_1829 PF02576 RimP N-terminal domain NT98_1830 PF00575 S1 RNA binding domain NT98_1830 PF08529 NusA N-terminal domain NT98_1830 PF13184 NusA-like KH domain NT98_1831 PF04296 Protein of unknown function (DUF448) NT98_1832 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family NT98_1833 PF04760 Translation initiation factor IF-2, N-terminal region NT98_1833 PF11987 Translation-initiation factor 2 NT98_1833 PF00009 Elongation factor Tu GTP binding domain NT98_1834 PF04456 Protein of unknown function (DUF503) NT98_1835 PF02033 Ribosome-binding factor A NT98_1836 PF16198 tRNA pseudouridylate synthase B C-terminal domain NT98_1836 PF01509 TruB family pseudouridylate synthase (N terminal domain) NT98_1837 PF06574 FAD synthetase NT98_1837 PF01687 Riboflavin kinase NT98_1838 PF00312 Ribosomal protein S15 NT98_1839 PF03725 3' exoribonuclease family, domain 2 NT98_1839 PF00013 KH domain NT98_1839 PF00575 S1 RNA binding domain NT98_1839 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NT98_1839 PF01138 3' exoribonuclease family, domain 1 NT98_1840 PF01522 Polysaccharide deacetylase NT98_1841 PF05193 Peptidase M16 inactive domain NT98_1841 PF00675 Insulinase (Peptidase family M16) NT98_1842 PF05239 PRC-barrel domain NT98_1843 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NT98_1843 PF16924 Dipicolinate synthase subunit A N-terminal domain NT98_1844 PF02441 Flavoprotein NT98_1853 PF01118 Semialdehyde dehydrogenase, NAD binding domain NT98_1853 PF02774 Semialdehyde dehydrogenase, dimerisation domain NT98_1854 PF13840 ACT domain NT98_1854 PF00696 Amino acid kinase family NT98_1855 PF00701 Dihydrodipicolinate synthetase family NT98_1856 PF17770 Ribonuclease J C-terminal domain NT98_1856 PF00753 Metallo-beta-lactamase superfamily NT98_1856 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NT98_1857 PF00574 Clp protease NT98_1858 PF14035 YlzJ-like protein NT98_1859 PF09397 Ftsk gamma domain NT98_1859 PF01580 FtsK/SpoIIIE family NT98_1859 PF17854 FtsK alpha domain NT98_186 PF01773 Na+ dependent nucleoside transporter N-terminus NT98_186 PF07662 Na+ dependent nucleoside transporter C-terminus NT98_1860 PF07702 UTRA domain NT98_1860 PF00392 Bacterial regulatory proteins, gntR family NT98_1865 PF05193 Peptidase M16 inactive domain NT98_1866 PF00675 Insulinase (Peptidase family M16) NT98_1866 PF05193 Peptidase M16 inactive domain NT98_1868 PF11588 Protein of unknown function (DUF3243) NT98_1869 PF11868 Protein of unknown function (DUF3388) NT98_187 PF01476 LysM domain NT98_187 PF00877 NlpC/P60 family NT98_1870 PF13464 Domain of unknown function (DUF4115) NT98_1871 PF01066 CDP-alcohol phosphatidyltransferase NT98_1872 PF18146 Damage-inducible protein CinA KH domain NT98_1872 PF02464 Competence-damaged protein NT98_1872 PF00994 Probable molybdopterin binding domain NT98_1873 PF00154 recA bacterial DNA recombination protein NT98_1874 PF00013 KH domain NT98_1874 PF12072 Domain of unknown function (DUF3552) NT98_1874 PF01966 HD domain NT98_1875 PF13277 YmdB-like protein NT98_1876 PF04232 Stage V sporulation protein S (SpoVS) NT98_1877 PF01244 Membrane dipeptidase (Peptidase family M19) NT98_1878 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase NT98_1878 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg NT98_1878 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II NT98_1879 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NT98_188 PF01063 Amino-transferase class IV NT98_1880 PF04055 Radical SAM superfamily NT98_1880 PF01938 TRAM domain NT98_1880 PF00919 Uncharacterized protein family UPF0004 NT98_1881 PF06133 Control of competence regulator ComK, YlbF/YmcA NT98_1882 PF10628 Outer spore coat protein E (CotE) NT98_1883 PF01624 MutS domain I NT98_1883 PF05190 MutS family domain IV NT98_1883 PF05192 MutS domain III NT98_1883 PF05188 MutS domain II NT98_1883 PF00488 MutS domain V NT98_1884 PF08676 MutL C terminal dimerisation domain NT98_1884 PF01119 DNA mismatch repair protein, C-terminal domain NT98_1886 PF00005 ABC transporter NT98_1889 PF00072 Response regulator receiver domain NT98_1889 PF00486 Transcriptional regulatory protein, C terminal NT98_189 PF00884 Sulfatase NT98_1890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_1890 PF00512 His Kinase A (phospho-acceptor) domain NT98_1891 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family NT98_1893 PF00350 Dynamin family NT98_1894 PF00884 Sulfatase NT98_1896 PF07486 Cell Wall Hydrolase NT98_1897 PF00082 Subtilase family NT98_1898 PF00388 Phosphatidylinositol-specific phospholipase C, X domain NT98_1899 PF00388 Phosphatidylinositol-specific phospholipase C, X domain NT98_19 PF01053 Cys/Met metabolism PLP-dependent enzyme NT98_1900 PF00232 Glycosyl hydrolase family 1 NT98_1901 PF07702 UTRA domain NT98_1901 PF00392 Bacterial regulatory proteins, gntR family NT98_1903 PF02585 GlcNAc-PI de-N-acetylase NT98_1904 PF00561 alpha/beta hydrolase fold NT98_1905 PF00392 Bacterial regulatory proteins, gntR family NT98_1905 PF00155 Aminotransferase class I and II NT98_1906 PF03788 LrgA family NT98_1907 PF04172 LrgB-like family NT98_1908 PF10787 Uncharacterised protein from bacillus cereus group NT98_1909 PF02567 Phenazine biosynthesis-like protein NT98_191 PF09988 Uncharacterized metal-binding protein (DUF2227) NT98_1911 PF02719 Polysaccharide biosynthesis protein NT98_1911 PF08485 Polysaccharide biosynthesis protein C-terminal NT98_1912 PF16363 GDP-mannose 4,6 dehydratase NT98_1914 PF04101 Glycosyltransferase family 28 C-terminal domain NT98_1914 PF03033 Glycosyltransferase family 28 N-terminal domain NT98_1915 PF03707 Bacterial signalling protein N terminal repeat NT98_1915 PF00990 Diguanylate cyclase, GGDEF domain NT98_1915 PF00563 EAL domain NT98_1916 PF00561 alpha/beta hydrolase fold NT98_1920 PF07687 Peptidase dimerisation domain NT98_1920 PF01546 Peptidase family M20/M25/M40 NT98_1921 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain NT98_1921 PF00730 HhH-GPD superfamily base excision DNA repair protein NT98_1922 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NT98_1922 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NT98_1923 PF02805 Metal binding domain of Ada NT98_1923 PF12833 Helix-turn-helix domain NT98_1924 PF03372 Endonuclease/Exonuclease/phosphatase family NT98_1925 PF01497 Periplasmic binding protein NT98_1926 PF01032 FecCD transport family NT98_1927 PF01032 FecCD transport family NT98_1928 PF00005 ABC transporter NT98_1929 PF00756 Putative esterase NT98_193 PF02652 L-lactate permease NT98_1931 PF02583 Metal-sensitive transcriptional repressor NT98_1932 PF00403 Heavy-metal-associated domain NT98_1933 PF00403 Heavy-metal-associated domain NT98_1935 PF00216 Bacterial DNA-binding protein NT98_1936 PF01226 Formate/nitrite transporter NT98_1937 PF00149 Calcineurin-like phosphoesterase NT98_1937 PF10518 TAT (twin-arginine translocation) pathway signal sequence NT98_1938 PF00041 Fibronectin type III domain NT98_1938 PF00704 Glycosyl hydrolases family 18 NT98_1939 PF00324 Amino acid permease NT98_194 PF13667 ThiC-associated domain NT98_194 PF01964 Radical SAM ThiC family NT98_1942 PF04238 Protein of unknown function (DUF420) NT98_1943 PF00465 Iron-containing alcohol dehydrogenase NT98_1944 PF08220 DeoR-like helix-turn-helix domain NT98_1944 PF00455 DeoR C terminal sensor domain NT98_1945 PF00294 pfkB family carbohydrate kinase NT98_1946 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NT98_1946 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NT98_1947 PF06725 3D domain NT98_1947 PF01476 LysM domain NT98_195 PF02040 Arsenical pump membrane protein NT98_1950 PF17209 Hfq protein NT98_1952 PF13276 HTH-like domain NT98_1952 PF00665 Integrase core domain NT98_1952 PF13333 Integrase core domain NT98_1955 PF17866 AAA lid domain NT98_1955 PF00004 ATPase family associated with various cellular activities (AAA) NT98_1957 PF03458 UPF0126 domain NT98_1958 PF01926 50S ribosome-binding GTPase NT98_1958 PF13167 GTP-binding GTPase N-terminal NT98_1958 PF16360 GTP-binding GTPase Middle Region NT98_1959 PF06838 Methionine gamma-lyase NT98_196 PF02322 Cytochrome bd terminal oxidase subunit II NT98_1960 PF13411 MerR HTH family regulatory protein NT98_1961 PF00120 Glutamine synthetase, catalytic domain NT98_1961 PF03951 Glutamine synthetase, beta-Grasp domain NT98_1967 PF03551 Transcriptional regulator PadR-like family NT98_197 PF01654 Cytochrome bd terminal oxidase subunit I NT98_1970 PF01726 LexA DNA binding domain NT98_1970 PF00717 Peptidase S24-like NT98_1971 PF00239 Resolvase, N terminal domain NT98_1972 PF05979 Bacterial protein of unknown function (DUF896) NT98_1973 PF02872 5'-nucleotidase, C-terminal domain NT98_1973 PF00149 Calcineurin-like phosphoesterase NT98_1974 PF00497 Bacterial extracellular solute-binding proteins, family 3 NT98_1975 PF00005 ABC transporter NT98_1976 PF00528 Binding-protein-dependent transport system inner membrane component NT98_1977 PF00528 Binding-protein-dependent transport system inner membrane component NT98_1978 PF02779 Transketolase, pyrimidine binding domain NT98_1978 PF02780 Transketolase, C-terminal domain NT98_1978 PF00456 Transketolase, thiamine diphosphate binding domain NT98_1979 PF10747 Sporulation inhibitor of replication protein SirA NT98_1980 PF03672 Uncharacterised protein family (UPF0154) NT98_1981 PF00005 ABC transporter NT98_1981 PF00664 ABC transporter transmembrane region NT98_1982 PF00664 ABC transporter transmembrane region NT98_1982 PF00005 ABC transporter NT98_1985 PF01471 Putative peptidoglycan binding domain NT98_1985 PF01510 N-acetylmuramoyl-L-alanine amidase NT98_1987 PF01925 Sulfite exporter TauE/SafE NT98_1989 PF00293 NUDIX domain NT98_1989 PF13344 Haloacid dehalogenase-like hydrolase NT98_1990 PF04172 LrgB-like family NT98_1991 PF03788 LrgA family NT98_1992 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NT98_1992 PF03466 LysR substrate binding domain NT98_1994 PF00005 ABC transporter NT98_1998 PF02683 Cytochrome C biogenesis protein transmembrane region NT98_1999 PF07301 Protein of unknown function (DUF1453) NT98_2 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NT98_20 PF04204 Homoserine O-succinyltransferase NT98_200 PF03466 LysR substrate binding domain NT98_200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NT98_2002 PF11084 Protein of unknown function (DUF2621) NT98_2006 PF01209 ubiE/COQ5 methyltransferase family NT98_2007 PF09021 HutP NT98_2008 PF00221 Aromatic amino acid lyase NT98_2009 PF17391 Urocanase N-terminal domain NT98_2009 PF17392 Urocanase C-terminal domain NT98_2009 PF01175 Urocanase Rossmann-like domain NT98_2010 PF01979 Amidohydrolase family NT98_2011 PF00491 Arginase family NT98_2012 PF02559 CarD-like/TRCF domain NT98_2013 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NT98_2014 PF01645 Conserved region in glutamate synthase NT98_2016 PF00474 Sodium:solute symporter family NT98_2017 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NT98_2018 PF01738 Dienelactone hydrolase family NT98_2019 PF00989 PAS fold NT98_2019 PF13426 PAS domain NT98_2019 PF13188 PAS domain NT98_2019 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_2019 PF00512 His Kinase A (phospho-acceptor) domain NT98_202 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NT98_2021 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 NT98_2021 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) NT98_2026 PF05532 CsbD-like NT98_2029 PF01381 Helix-turn-helix NT98_2030 PF00005 ABC transporter NT98_2032 PF13193 AMP-binding enzyme C-terminal domain NT98_2032 PF00501 AMP-binding enzyme NT98_2033 PF02632 BioY family NT98_2034 PF13193 AMP-binding enzyme C-terminal domain NT98_2034 PF00501 AMP-binding enzyme NT98_2035 PF02803 Thiolase, C-terminal domain NT98_2035 PF00108 Thiolase, N-terminal domain NT98_2037 PF13344 Haloacid dehalogenase-like hydrolase NT98_2037 PF00293 NUDIX domain NT98_2038 PF02272 DHHA1 domain NT98_2038 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NT98_2038 PF01411 tRNA synthetases class II (A) NT98_204 PF00375 Sodium:dicarboxylate symporter family NT98_2040 PF07690 Major Facilitator Superfamily NT98_2042 PF08179 Small acid-soluble spore protein P family NT98_2044 PF01522 Polysaccharide deacetylase NT98_2046 PF00330 Aconitase family (aconitate hydratase) NT98_2046 PF00694 Aconitase C-terminal domain NT98_2047 PF00664 ABC transporter transmembrane region NT98_2047 PF00005 ABC transporter NT98_2047 PF03412 Peptidase C39 family NT98_2049 PF00578 AhpC/TSA family NT98_205 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NT98_2050 PF07733 Bacterial DNA polymerase III alpha NTPase domain NT98_2050 PF11490 DNA polymerase III polC-type N-terminus II NT98_2050 PF01336 OB-fold nucleic acid binding domain NT98_2050 PF14579 Helix-hairpin-helix motif NT98_2050 PF02811 PHP domain NT98_2050 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NT98_2050 PF00929 Exonuclease NT98_2051 PF13040 Fur-regulated basic protein B NT98_2052 PF08177 Small acid-soluble spore protein N family NT98_2054 PF00704 Glycosyl hydrolases family 18 NT98_2054 PF01476 LysM domain NT98_2055 PF03061 Thioesterase superfamily NT98_2056 PF01521 Iron-sulphur cluster biosynthesis NT98_2057 PF02660 Glycerol-3-phosphate acyltransferase NT98_2058 PF03477 ATP cone domain NT98_2058 PF13597 Anaerobic ribonucleoside-triphosphate reductase NT98_206 PF02378 Phosphotransferase system, EIIC NT98_2060 PF00486 Transcriptional regulatory protein, C terminal NT98_2060 PF00072 Response regulator receiver domain NT98_2061 PF13180 PDZ domain NT98_2062 PF13380 CoA binding domain NT98_2063 PF00986 DNA gyrase B subunit, carboxyl terminus NT98_2063 PF01751 Toprim domain NT98_2063 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_2063 PF00204 DNA gyrase B NT98_2064 PF00521 DNA gyrase/topoisomerase IV, subunit A NT98_2064 PF03989 DNA gyrase C-terminal domain, beta-propeller NT98_2065 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NT98_2065 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NT98_2069 PF00005 ABC transporter NT98_2069 PF13732 Domain of unknown function (DUF4162) NT98_207 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit NT98_2071 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NT98_2072 PF04542 Sigma-70 region 2 NT98_2072 PF08281 Sigma-70, region 4 NT98_2074 PF03816 Cell envelope-related transcriptional attenuator domain NT98_2075 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NT98_2077 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NT98_2078 PF00899 ThiF family NT98_208 PF02675 S-adenosylmethionine decarboxylase NT98_2080 PF08241 Methyltransferase domain NT98_2087 PF13520 Amino acid permease NT98_2090 PF03323 Bacillus/Clostridium GerA spore germination protein NT98_2091 PF00384 Molybdopterin oxidoreductase NT98_2091 PF01568 Molydopterin dinucleotide binding domain NT98_2091 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NT98_2091 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NT98_2091 PF00037 4Fe-4S binding domain NT98_2092 PF07849 Protein of unknown function (DUF1641) NT98_2093 PF10057 Uncharacterized conserved protein (DUF2294) NT98_2094 PF02634 FdhD/NarQ family NT98_2095 PF06463 Molybdenum Cofactor Synthesis C NT98_2095 PF04055 Radical SAM superfamily NT98_2096 PF01226 Formate/nitrite transporter NT98_2097 PF00899 ThiF family NT98_2098 PF00994 Probable molybdopterin binding domain NT98_2098 PF03454 MoeA C-terminal region (domain IV) NT98_2098 PF03453 MoeA N-terminal region (domain I and II) NT98_2099 PF02391 MoaE protein NT98_21 PF03447 Homoserine dehydrogenase, NAD binding domain NT98_21 PF00742 Homoserine dehydrogenase NT98_21 PF01842 ACT domain NT98_210 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NT98_2101 PF10609 NUBPL iron-transfer P-loop NTPase NT98_2104 PF06961 Protein of unknown function (DUF1294) NT98_2105 PF00892 EamA-like transporter family NT98_2106 PF02681 Divergent PAP2 family NT98_2107 PF13243 Squalene-hopene cyclase C-terminal domain NT98_2107 PF13249 Squalene-hopene cyclase N-terminal domain NT98_211 PF02378 Phosphotransferase system, EIIC NT98_2110 PF00171 Aldehyde dehydrogenase family NT98_2112 PF00474 Sodium:solute symporter family NT98_2113 PF01156 Inosine-uridine preferring nucleoside hydrolase NT98_2115 PF00206 Lyase NT98_2115 PF14698 Argininosuccinate lyase C-terminal NT98_2117 PF00106 short chain dehydrogenase NT98_212 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit NT98_2120 PF00293 NUDIX domain NT98_2122 PF00258 Flavodoxin NT98_2124 PF00313 'Cold-shock' DNA-binding domain NT98_2127 PF13037 Domain of unknown function (DUF3898) NT98_2127 PF13039 Protein of unknown function (DUF3900) NT98_2129 PF04294 VanW like protein NT98_213 PF11975 Family 4 glycosyl hydrolase C-terminal domain NT98_213 PF02056 Family 4 glycosyl hydrolase NT98_2130 PF00528 Binding-protein-dependent transport system inner membrane component NT98_2131 PF00005 ABC transporter NT98_2132 PF00497 Bacterial extracellular solute-binding proteins, family 3 NT98_2133 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NT98_2135 PF00899 ThiF family NT98_2136 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NT98_2139 PF02308 MgtC family NT98_214 PF04794 YdjC-like protein NT98_2140 PF01752 Collagenase NT98_2140 PF18496 Collagenase G catalytic helper subdomain NT98_2140 PF08453 Peptidase family M9 N-terminal NT98_2142 PF00989 PAS fold NT98_2142 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_2142 PF00512 His Kinase A (phospho-acceptor) domain NT98_2145 PF01022 Bacterial regulatory protein, arsR family NT98_2146 PF01520 N-acetylmuramoyl-L-alanine amidase NT98_2146 PF00395 S-layer homology domain NT98_2147 PF07968 Leukocidin/Hemolysin toxin family NT98_2148 PF00440 Bacterial regulatory proteins, tetR family NT98_215 PF02417 Chromate transporter NT98_2151 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit NT98_2154 PF01609 Transposase DDE domain NT98_2155 PF01565 FAD binding domain NT98_2155 PF02913 FAD linked oxidases, C-terminal domain NT98_2156 PF01758 Sodium Bile acid symporter family NT98_2159 PF04299 Putative FMN-binding domain NT98_2160 PF18801 response regulator aspartate phosphatase H, N terminal NT98_2162 PF02696 Uncharacterized ACR, YdiU/UPF0061 family NT98_2163 PF08240 Alcohol dehydrogenase GroES-like domain NT98_2163 PF00107 Zinc-binding dehydrogenase NT98_2164 PF01022 Bacterial regulatory protein, arsR family NT98_2165 PF01494 FAD binding domain NT98_2166 PF01494 FAD binding domain NT98_2167 PF03009 Glycerophosphoryl diester phosphodiesterase family NT98_217 PF00874 PRD domain NT98_217 PF03610 PTS system fructose IIA component NT98_217 PF00158 Sigma-54 interaction domain NT98_2170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NT98_2170 PF03466 LysR substrate binding domain NT98_2171 PF07690 Major Facilitator Superfamily NT98_2173 PF00144 Beta-lactamase NT98_2175 PF04371 Porphyromonas-type peptidyl-arginine deiminase NT98_2179 PF04371 Porphyromonas-type peptidyl-arginine deiminase NT98_2180 PF01432 Peptidase family M3 NT98_2180 PF08439 Oligopeptidase F NT98_2181 PF00797 N-acetyltransferase NT98_2182 PF00128 Alpha amylase, catalytic domain NT98_2182 PF09154 Domain of unknown function (DUF1939) NT98_2184 PF01713 Smr domain NT98_2184 PF00488 MutS domain V NT98_2187 PF00107 Zinc-binding dehydrogenase NT98_2187 PF08240 Alcohol dehydrogenase GroES-like domain NT98_2188 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NT98_2188 PF03466 LysR substrate binding domain NT98_219 PF00953 Glycosyl transferase family 4 NT98_2190 PF10901 Protein of unknown function (DUF2690) NT98_2195 PF05675 Protein of unknown function (DUF817) NT98_2196 PF01032 FecCD transport family NT98_2197 PF01032 FecCD transport family NT98_2198 PF01497 Periplasmic binding protein NT98_220 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NT98_220 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NT98_220 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NT98_2201 PF03600 Citrate transporter NT98_2202 PF08830 Protein of unknown function (DUF1806) NT98_2203 PF02585 GlcNAc-PI de-N-acetylase NT98_2206 PF07690 Major Facilitator Superfamily NT98_2207 PF00324 Amino acid permease NT98_2208 PF00107 Zinc-binding dehydrogenase NT98_2208 PF08240 Alcohol dehydrogenase GroES-like domain NT98_2209 PF03551 Transcriptional regulator PadR-like family NT98_221 PF02350 UDP-N-acetylglucosamine 2-epimerase NT98_2212 PF00753 Metallo-beta-lactamase superfamily NT98_222 PF02350 UDP-N-acetylglucosamine 2-epimerase NT98_2221 PF00144 Beta-lactamase NT98_2224 PF12650 Domain of unknown function (DUF3784) NT98_2226 PF00753 Metallo-beta-lactamase superfamily NT98_2228 PF03063 Prismane/CO dehydrogenase family NT98_223 PF03816 Cell envelope-related transcriptional attenuator domain NT98_2231 PF00005 ABC transporter NT98_2231 PF13732 Domain of unknown function (DUF4162) NT98_2232 PF01061 ABC-2 type transporter NT98_2233 PF05656 Protein of unknown function (DUF805) NT98_2237 PF01810 LysE type translocator NT98_2238 PF00535 Glycosyl transferase family 2 NT98_2238 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 NT98_2239 PF04542 Sigma-70 region 2 NT98_224 PF09186 Domain of unknown function (DUF1949) NT98_224 PF01205 Uncharacterized protein family UPF0029 NT98_2240 PF12791 Anti-sigma factor N-terminus NT98_2241 PF01522 Polysaccharide deacetylase NT98_2241 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain NT98_2242 PF01022 Bacterial regulatory protein, arsR family NT98_2246 PF01638 HxlR-like helix-turn-helix NT98_2247 PF02525 Flavodoxin-like fold NT98_2248 PF13193 AMP-binding enzyme C-terminal domain NT98_2248 PF00501 AMP-binding enzyme NT98_2249 PF13302 Acetyltransferase (GNAT) domain NT98_225 PF02645 Uncharacterised protein, DegV family COG1307 NT98_2253 PF02567 Phenazine biosynthesis-like protein NT98_226 PF01638 HxlR-like helix-turn-helix NT98_2260 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NT98_2260 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NT98_2261 PF07702 UTRA domain NT98_2261 PF00392 Bacterial regulatory proteins, gntR family NT98_2262 PF03960 ArsC family NT98_2269 PF03928 Haem-degrading NT98_227 PF01476 LysM domain NT98_227 PF00877 NlpC/P60 family NT98_2271 PF14765 Polyketide synthase dehydratase NT98_2271 PF08659 KR domain NT98_2271 PF02801 Beta-ketoacyl synthase, C-terminal domain NT98_2271 PF00109 Beta-ketoacyl synthase, N-terminal domain NT98_2271 PF16197 Ketoacyl-synthetase C-terminal extension NT98_2271 PF00107 Zinc-binding dehydrogenase NT98_2271 PF08240 Alcohol dehydrogenase GroES-like domain NT98_2271 PF00698 Acyl transferase domain NT98_2271 PF00550 Phosphopantetheine attachment site NT98_2273 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NT98_2273 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NT98_2274 PF02779 Transketolase, pyrimidine binding domain NT98_2274 PF02780 Transketolase, C-terminal domain NT98_2274 PF00456 Transketolase, thiamine diphosphate binding domain NT98_2275 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NT98_2275 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NT98_2276 PF00923 Transaldolase/Fructose-6-phosphate aldolase NT98_2277 PF02447 GntP family permease NT98_2278 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NT98_2278 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NT98_2279 PF10282 Lactonase, 7-bladed beta-propeller NT98_228 PF00271 Helicase conserved C-terminal domain NT98_228 PF04851 Type III restriction enzyme, res subunit NT98_2280 PF06906 Protein of unknown function (DUF1272) NT98_2281 PF00805 Pentapeptide repeats (8 copies) NT98_2282 PF00892 EamA-like transporter family NT98_2283 PF01370 NAD dependent epimerase/dehydratase family NT98_2285 PF08421 Putative zinc binding domain NT98_2285 PF08484 C-methyltransferase C-terminal domain NT98_2286 PF16363 GDP-mannose 4,6 dehydratase NT98_2287 PF00483 Nucleotidyl transferase NT98_2289 PF13411 MerR HTH family regulatory protein NT98_2290 PF01595 Cyclin M transmembrane N-terminal domain NT98_2290 PF03471 Transporter associated domain NT98_2290 PF00571 CBS domain NT98_2292 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) NT98_2296 PF07690 Major Facilitator Superfamily NT98_2298 PF08003 Protein of unknown function (DUF1698) NT98_23 PF00356 Bacterial regulatory proteins, lacI family NT98_23 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NT98_230 PF00313 'Cold-shock' DNA-binding domain NT98_2304 PF01594 AI-2E family transporter NT98_2306 PF00579 tRNA synthetases class I (W and Y) NT98_2308 PF02687 FtsX-like permease family NT98_2308 PF00005 ABC transporter NT98_2308 PF12704 MacB-like periplasmic core domain NT98_231 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus NT98_231 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NT98_2310 PF14602 Hexapeptide repeat of succinyl-transferase NT98_2310 PF12464 Maltose acetyltransferase NT98_2311 PF00480 ROK family NT98_2312 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NT98_2313 PF00293 NUDIX domain NT98_2313 PF13344 Haloacid dehalogenase-like hydrolase NT98_2319 PF13419 Haloacid dehalogenase-like hydrolase NT98_232 PF07517 SecA DEAD-like domain NT98_232 PF02810 SEC-C motif NT98_232 PF07516 SecA Wing and Scaffold domain NT98_232 PF01043 SecA preprotein cross-linking domain NT98_2324 PF00005 ABC transporter NT98_233 PF00472 RF-1 domain NT98_233 PF03462 PCRF domain NT98_2330 PF02887 Pyruvate kinase, alpha/beta domain NT98_2330 PF00391 PEP-utilising enzyme, mobile domain NT98_2330 PF00224 Pyruvate kinase, barrel domain NT98_2332 PF00881 Nitroreductase family NT98_2333 PF01638 HxlR-like helix-turn-helix NT98_2336 PF13393 Histidyl-tRNA synthetase NT98_2336 PF03129 Anticodon binding domain NT98_2337 PF04073 Aminoacyl-tRNA editing domain NT98_234 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NT98_2343 PF13411 MerR HTH family regulatory protein NT98_2343 PF07739 TipAS antibiotic-recognition domain NT98_2345 PF00440 Bacterial regulatory proteins, tetR family NT98_2346 PF07690 Major Facilitator Superfamily NT98_2347 PF01048 Phosphorylase superfamily NT98_2349 PF04231 Endonuclease I NT98_235 PF00005 ABC transporter NT98_2350 PF03606 C4-dicarboxylate anaerobic carrier NT98_2351 PF03737 Aldolase/RraA NT98_2354 PF02361 Cobalt transport protein NT98_2355 PF00005 ABC transporter NT98_2357 PF14256 YwiC-like protein NT98_236 PF02687 FtsX-like permease family NT98_236 PF18075 FtsX extracellular domain NT98_2361 PF02525 Flavodoxin-like fold NT98_2363 PF02667 Short chain fatty acid transporter NT98_2364 PF17440 Thiol-activated cytolysin beta sandwich domain NT98_2364 PF01289 Thiol-activated cytolysin NT98_2365 PF00440 Bacterial regulatory proteins, tetR family NT98_2366 PF00893 Small Multidrug Resistance protein NT98_2367 PF17314 Family of unknown function (DUF5360) NT98_2369 PF13396 Phospholipase_D-nuclease N-terminal NT98_237 PF03572 Peptidase family S41 NT98_237 PF17820 PDZ domain NT98_237 PF01471 Putative peptidoglycan binding domain NT98_2370 PF13732 Domain of unknown function (DUF4162) NT98_2370 PF00005 ABC transporter NT98_2371 PF12679 ABC-2 family transporter protein NT98_2374 PF07690 Major Facilitator Superfamily NT98_2375 PF01047 MarR family NT98_2376 PF12697 Alpha/beta hydrolase family NT98_2378 PF07690 Major Facilitator Superfamily NT98_2379 PF14044 NETI protein NT98_238 PF17820 PDZ domain NT98_2380 PF09587 Bacterial capsule synthesis protein PGA_cap NT98_2381 PF02557 D-alanyl-D-alanine carboxypeptidase NT98_2388 PF01471 Putative peptidoglycan binding domain NT98_2388 PF01476 LysM domain NT98_2388 PF01510 N-acetylmuramoyl-L-alanine amidase NT98_239 PF00005 ABC transporter NT98_239 PF00664 ABC transporter transmembrane region NT98_2390 PF01804 Penicillin amidase NT98_2391 PF00072 Response regulator receiver domain NT98_2391 PF00196 Bacterial regulatory proteins, luxR family NT98_2397 PF00266 Aminotransferase class-V NT98_2398 PF01842 ACT domain NT98_2398 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NT98_2398 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NT98_24 PF13472 GDSL-like Lipase/Acylhydrolase family NT98_240 PF01906 Putative heavy-metal-binding NT98_2402 PF17676 LD-carboxypeptidase C-terminal domain NT98_2402 PF02016 LD-carboxypeptidase N-terminal domain NT98_2405 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 NT98_2405 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) NT98_2406 PF00072 Response regulator receiver domain NT98_2406 PF00486 Transcriptional regulatory protein, C terminal NT98_2407 PF00512 His Kinase A (phospho-acceptor) domain NT98_2407 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_2407 PF00672 HAMP domain NT98_241 PF03358 NADPH-dependent FMN reductase NT98_2410 PF02687 FtsX-like permease family NT98_2411 PF00005 ABC transporter NT98_2414 PF04072 Leucine carboxyl methyltransferase NT98_2418 PF01381 Helix-turn-helix NT98_242 PF00376 MerR family regulatory protein NT98_242 PF09278 MerR, DNA binding NT98_2420 PF00144 Beta-lactamase NT98_2423 PF00291 Pyridoxal-phosphate dependent enzyme NT98_2429 PF00512 His Kinase A (phospho-acceptor) domain NT98_2429 PF00672 HAMP domain NT98_2429 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_243 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NT98_243 PF03466 LysR substrate binding domain NT98_2431 PF00072 Response regulator receiver domain NT98_2431 PF00486 Transcriptional regulatory protein, C terminal NT98_2437 PF07690 Major Facilitator Superfamily NT98_2438 PF00667 FAD binding domain NT98_2438 PF00175 Oxidoreductase NAD-binding domain NT98_2438 PF00258 Flavodoxin NT98_2438 PF00067 Cytochrome P450 NT98_2439 PF13302 Acetyltransferase (GNAT) domain NT98_244 PF03601 Conserved hypothetical protein 698 NT98_2440 PF08241 Methyltransferase domain NT98_2445 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NT98_2449 PF01037 Lrp/AsnC ligand binding domain NT98_2451 PF00440 Bacterial regulatory proteins, tetR family NT98_2452 PF07690 Major Facilitator Superfamily NT98_2453 PF18665 Tetracyclin repressor-like, C-terminal domain NT98_2453 PF00440 Bacterial regulatory proteins, tetR family NT98_2456 PF01609 Transposase DDE domain NT98_2457 PF01609 Transposase DDE domain NT98_2461 PF01022 Bacterial regulatory protein, arsR family NT98_2462 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NT98_2463 PF01758 Sodium Bile acid symporter family NT98_2464 PF01451 Low molecular weight phosphotyrosine protein phosphatase NT98_2466 PF12746 GNAT acetyltransferase NT98_2469 PF12833 Helix-turn-helix domain NT98_2469 PF01965 DJ-1/PfpI family NT98_2470 PF00072 Response regulator receiver domain NT98_2470 PF04397 LytTr DNA-binding domain NT98_2471 PF05384 Sensor protein DegS NT98_2471 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_2471 PF07730 Histidine kinase NT98_2472 PF02687 FtsX-like permease family NT98_2473 PF00005 ABC transporter NT98_2474 PF12996 DUF based on E. rectale Gene description (DUF3880) NT98_2475 PF01040 UbiA prenyltransferase family NT98_2479 PF03466 LysR substrate binding domain NT98_2479 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NT98_2480 PF07690 Major Facilitator Superfamily NT98_2482 PF07690 Major Facilitator Superfamily NT98_2483 PF10057 Uncharacterized conserved protein (DUF2294) NT98_2484 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NT98_2484 PF00361 Proton-conducting membrane transporter NT98_2485 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) NT98_2487 PF07859 alpha/beta hydrolase fold NT98_2489 PF07690 Major Facilitator Superfamily NT98_2491 PF00875 DNA photolyase NT98_2491 PF03441 FAD binding domain of DNA photolyase NT98_2492 PF03073 TspO/MBR family NT98_2499 PF11181 Heat induced stress protein YflT NT98_25 PF00005 ABC transporter NT98_250 PF13411 MerR HTH family regulatory protein NT98_250 PF07739 TipAS antibiotic-recognition domain NT98_2502 PF01544 CorA-like Mg2+ transporter protein NT98_2503 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NT98_2503 PF03466 LysR substrate binding domain NT98_2504 PF01979 Amidohydrolase family NT98_2507 PF00857 Isochorismatase family NT98_2508 PF00561 alpha/beta hydrolase fold NT98_2509 PF00149 Calcineurin-like phosphoesterase NT98_2509 PF17936 Bacterial Ig domain NT98_2509 PF02872 5'-nucleotidase, C-terminal domain NT98_2514 PF01235 Sodium:alanine symporter family NT98_2516 PF04960 Glutaminase NT98_2517 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_2518 PF08664 YcbB domain NT98_2518 PF00072 Response regulator receiver domain NT98_2519 PF03323 Bacillus/Clostridium GerA spore germination protein NT98_2520 PF03845 Spore germination protein NT98_2521 PF05504 Spore germination B3/ GerAC like, C-terminal NT98_2522 PF03807 NADP oxidoreductase coenzyme F420-dependent NT98_2522 PF14748 Pyrroline-5-carboxylate reductase dimerisation NT98_2523 PF13520 Amino acid permease NT98_2524 PF08459 UvrC Helix-hairpin-helix N-terminal NT98_2524 PF01541 GIY-YIG catalytic domain NT98_2524 PF02151 UvrB/uvrC motif NT98_2524 PF12826 Helix-hairpin-helix motif NT98_2525 PF12833 Helix-turn-helix domain NT98_2525 PF17853 GGDEF-like domain NT98_2528 PF05791 Bacillus haemolytic enterotoxin (HBL) NT98_2529 PF05791 Bacillus haemolytic enterotoxin (HBL) NT98_253 PF00271 Helicase conserved C-terminal domain NT98_253 PF04851 Type III restriction enzyme, res subunit NT98_253 PF17757 UvrB interaction domain NT98_253 PF12344 Ultra-violet resistance protein B NT98_253 PF02151 UvrB/uvrC motif NT98_2530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_2530 PF00512 His Kinase A (phospho-acceptor) domain NT98_2530 PF00989 PAS fold NT98_2530 PF13426 PAS domain NT98_2530 PF13188 PAS domain NT98_2531 PF03323 Bacillus/Clostridium GerA spore germination protein NT98_2532 PF03845 Spore germination protein NT98_2533 PF05504 Spore germination B3/ GerAC like, C-terminal NT98_2534 PF01381 Helix-turn-helix NT98_2535 PF17763 Glutaminase/Asparaginase C-terminal domain NT98_2535 PF00710 Asparaginase, N-terminal NT98_2536 PF00206 Lyase NT98_2536 PF10415 Fumarase C C-terminus NT98_2538 PF13823 Alcohol dehydrogenase GroES-associated NT98_2538 PF00107 Zinc-binding dehydrogenase NT98_2538 PF08240 Alcohol dehydrogenase GroES-like domain NT98_2539 PF00269 Small, acid-soluble spore proteins, alpha/beta type NT98_254 PF00005 ABC transporter NT98_254 PF17760 UvrA interaction domain NT98_254 PF17755 UvrA DNA-binding domain NT98_2540 PF11553 Protein of unknown function (DUF3231) NT98_2541 PF10710 Protein of unknown function (DUF2512) NT98_2542 PF00753 Metallo-beta-lactamase superfamily NT98_2544 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NT98_2544 PF00391 PEP-utilising enzyme, mobile domain NT98_2545 PF00440 Bacterial regulatory proteins, tetR family NT98_2547 PF02915 Rubrerythrin NT98_2550 PF00395 S-layer homology domain NT98_2550 PF01520 N-acetylmuramoyl-L-alanine amidase NT98_2555 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NT98_2555 PF02770 Acyl-CoA dehydrogenase, middle domain NT98_2555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NT98_2558 PF07454 Stage II sporulation protein P (SpoIIP) NT98_2559 PF03932 CutC family NT98_256 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV NT98_2560 PF10502 Signal peptidase, peptidase S26 NT98_2561 PF01614 Bacterial transcriptional regulator NT98_2561 PF09339 IclR helix-turn-helix domain NT98_2562 PF02682 Carboxyltransferase domain, subdomain C and D NT98_2563 PF02626 Carboxyltransferase domain, subdomain A and B NT98_2564 PF03746 LamB/YcsF family NT98_2567 PF01470 Pyroglutamyl peptidase NT98_2569 PF02146 Sir2 family NT98_257 PF02603 HPr Serine kinase N terminus NT98_257 PF07475 HPr Serine kinase C-terminal domain NT98_2572 PF10502 Signal peptidase, peptidase S26 NT98_2574 PF00293 NUDIX domain NT98_2577 PF06445 GyrI-like small molecule binding domain NT98_2577 PF13411 MerR HTH family regulatory protein NT98_2578 PF08713 DNA alkylation repair enzyme NT98_258 PF01790 Prolipoprotein diacylglyceryl transferase NT98_2580 PF00324 Amino acid permease NT98_2582 PF01925 Sulfite exporter TauE/SafE NT98_2588 PF13031 Protein of unknown function (DUF3892) NT98_2589 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 NT98_259 PF13419 Haloacid dehalogenase-like hydrolase NT98_2590 PF00392 Bacterial regulatory proteins, gntR family NT98_2590 PF00155 Aminotransferase class I and II NT98_2591 PF00892 EamA-like transporter family NT98_2594 PF00583 Acetyltransferase (GNAT) family NT98_2595 PF12833 Helix-turn-helix domain NT98_26 PF12679 ABC-2 family transporter protein NT98_260 PF14602 Hexapeptide repeat of succinyl-transferase NT98_2600 PF00392 Bacterial regulatory proteins, gntR family NT98_2601 PF00005 ABC transporter NT98_2604 PF00293 NUDIX domain NT98_2606 PF03764 Elongation factor G, domain IV NT98_2606 PF14492 Elongation Factor G, domain II NT98_2606 PF00009 Elongation factor Tu GTP binding domain NT98_2606 PF00679 Elongation factor G C-terminus NT98_2607 PF01047 MarR family NT98_2608 PF00881 Nitroreductase family NT98_2610 PF01022 Bacterial regulatory protein, arsR family NT98_2612 PF01740 STAS domain NT98_2612 PF00916 Sulfate permease family NT98_2613 PF08274 PhnA Zinc-Ribbon NT98_2613 PF03831 PhnA domain NT98_2615 PF07726 ATPase family associated with various cellular activities (AAA) NT98_2615 PF17863 AAA lid domain NT98_2619 PF00144 Beta-lactamase NT98_262 PF07992 Pyridine nucleotide-disulphide oxidoreductase NT98_2620 PF01979 Amidohydrolase family NT98_2620 PF13382 Adenine deaminase C-terminal domain NT98_2622 PF06628 Catalase-related immune-responsive NT98_2622 PF00199 Catalase NT98_2623 PF00202 Aminotransferase class-III NT98_2624 PF07690 Major Facilitator Superfamily NT98_2627 PF07726 ATPase family associated with various cellular activities (AAA) NT98_2627 PF17863 AAA lid domain NT98_2631 PF12681 Glyoxalase-like domain NT98_2632 PF13302 Acetyltransferase (GNAT) domain NT98_2638 PF10086 YhfC intramembrane metalloprotease NT98_264 PF00293 NUDIX domain NT98_2641 PF13443 Cro/C1-type HTH DNA-binding domain NT98_2642 PF11188 Protein of unknown function (DUF2975) NT98_2643 PF00245 Alkaline phosphatase NT98_2644 PF05547 Immune inhibitor A peptidase M6 NT98_2645 PF00487 Fatty acid desaturase NT98_2646 PF01139 tRNA-splicing ligase RtcB NT98_2647 PF00324 Amino acid permease NT98_2648 PF09339 IclR helix-turn-helix domain NT98_2648 PF01614 Bacterial transcriptional regulator NT98_2649 PF01546 Peptidase family M20/M25/M40 NT98_265 PF03668 P-loop ATPase protein family NT98_2650 PF03807 NADP oxidoreductase coenzyme F420-dependent NT98_2650 PF14748 Pyrroline-5-carboxylate reductase dimerisation NT98_2651 PF01472 PUA domain NT98_2651 PF00696 Amino acid kinase family NT98_2652 PF00171 Aldehyde dehydrogenase family NT98_2653 PF01773 Na+ dependent nucleoside transporter N-terminus NT98_2653 PF07662 Na+ dependent nucleoside transporter C-terminus NT98_2657 PF03992 Antibiotic biosynthesis monooxygenase NT98_266 PF01933 Uncharacterised protein family UPF0052 NT98_2662 PF01791 DeoC/LacD family aldolase NT98_2664 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NT98_2664 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NT98_2665 PF00325 Bacterial regulatory proteins, crp family NT98_2665 PF04198 Putative sugar-binding domain NT98_2666 PF00005 ABC transporter NT98_2667 PF02653 Branched-chain amino acid transport system / permease component NT98_2668 PF02653 Branched-chain amino acid transport system / permease component NT98_2669 PF13407 Periplasmic binding protein domain NT98_267 PF02650 WhiA C-terminal HTH domain NT98_267 PF10298 WhiA N-terminal LAGLIDADG-like domain NT98_267 PF14527 WhiA LAGLIDADG-like domain NT98_2670 PF06039 Malate:quinone oxidoreductase (Mqo) NT98_2672 PF01476 LysM domain NT98_2672 PF06725 3D domain NT98_2675 PF01636 Phosphotransferase enzyme family NT98_268 PF00381 PTS HPr component phosphorylation site NT98_2680 PF00793 DAHP synthetase I family NT98_2680 PF01817 Chorismate mutase type II NT98_2681 PF01264 Chorismate synthase NT98_2682 PF00155 Aminotransferase class I and II NT98_2683 PF01842 ACT domain NT98_2683 PF02153 Prephenate dehydrogenase NT98_2684 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NT98_2686 PF16295 Tetracyclin repressor-like, C-terminal domain NT98_2686 PF00440 Bacterial regulatory proteins, tetR family NT98_2687 PF03176 MMPL family NT98_269 PF00574 Clp protease NT98_2696 PF00005 ABC transporter NT98_2696 PF12848 ABC transporter NT98_2697 PF00884 Sulfatase NT98_2698 PF03741 Integral membrane protein TerC family NT98_2699 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NT98_27 PF03167 Uracil DNA glycosylase superfamily NT98_270 PF04239 Protein of unknown function (DUF421) NT98_2701 PF03611 PTS system sugar-specific permease component NT98_2703 PF01522 Polysaccharide deacetylase NT98_2704 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NT98_2709 PF00583 Acetyltransferase (GNAT) family NT98_2710 PF12867 DinB superfamily NT98_2711 PF13536 Putative multidrug resistance efflux transporter NT98_2715 PF02522 Aminoglycoside 3-N-acetyltransferase NT98_2719 PF00293 NUDIX domain NT98_2719 PF09297 NADH pyrophosphatase zinc ribbon domain NT98_272 PF03862 SpoVAC/SpoVAEB sporulation membrane protein NT98_2721 PF00005 ABC transporter NT98_2722 PF09084 NMT1/THI5 like NT98_2723 PF00528 Binding-protein-dependent transport system inner membrane component NT98_2724 PF00296 Luciferase-like monooxygenase NT98_2726 PF01594 AI-2E family transporter NT98_273 PF07451 Stage V sporulation protein AD (SpoVAD) NT98_2737 PF00005 ABC transporter NT98_274 PF03862 SpoVAC/SpoVAEB sporulation membrane protein NT98_2741 PF03630 Fumble NT98_2742 PF07977 FabA-like domain NT98_2743 PF00155 Aminotransferase class I and II NT98_2750 PF08241 Methyltransferase domain NT98_2753 PF04226 Transglycosylase associated protein NT98_2758 PF07690 Major Facilitator Superfamily NT98_2759 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NT98_2759 PF12793 Sugar transport-related sRNA regulator N-term NT98_2760 PF13171 Protein of unknown function (DUF4004) NT98_2761 PF04519 Polymer-forming cytoskeletal NT98_2763 PF07690 Major Facilitator Superfamily NT98_2773 PF07552 Spore Coat Protein X and V domain NT98_2774 PF02645 Uncharacterised protein, DegV family COG1307 NT98_2775 PF01037 Lrp/AsnC ligand binding domain NT98_2777 PF13520 Amino acid permease NT98_2778 PF08439 Oligopeptidase F NT98_2778 PF01432 Peptidase family M3 NT98_2779 PF03808 Glycosyl transferase WecB/TagA/CpsF family NT98_278 PF00309 Sigma-54 factor, Activator interacting domain (AID) NT98_278 PF04963 Sigma-54 factor, core binding domain NT98_278 PF04552 Sigma-54, DNA binding domain NT98_2781 PF01048 Phosphorylase superfamily NT98_2782 PF13419 Haloacid dehalogenase-like hydrolase NT98_2787 PF00072 Response regulator receiver domain NT98_2787 PF00486 Transcriptional regulatory protein, C terminal NT98_2788 PF00672 HAMP domain NT98_2788 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_2788 PF00512 His Kinase A (phospho-acceptor) domain NT98_2789 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain NT98_2789 PF02129 X-Pro dipeptidyl-peptidase (S15 family) NT98_2794 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NT98_2796 PF01965 DJ-1/PfpI family NT98_2799 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NT98_2799 PF13378 Enolase C-terminal domain-like NT98_28 PF12823 Domain of unknown function (DUF3817) NT98_280 PF04198 Putative sugar-binding domain NT98_2800 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain NT98_2800 PF00877 NlpC/P60 family NT98_2801 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NT98_2804 PF04914 DltD protein NT98_2807 PF09335 SNARE associated Golgi protein NT98_2808 PF08876 Domain of unknown function (DUF1836) NT98_281 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NT98_281 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NT98_2811 PF07992 Pyridine nucleotide-disulphide oxidoreductase NT98_2811 PF04324 BFD-like [2Fe-2S] binding domain NT98_2813 PF07992 Pyridine nucleotide-disulphide oxidoreductase NT98_2813 PF04324 BFD-like [2Fe-2S] binding domain NT98_2814 PF02954 Bacterial regulatory protein, Fis family NT98_2814 PF00158 Sigma-54 interaction domain NT98_2814 PF13188 PAS domain NT98_2815 PF01266 FAD dependent oxidoreductase NT98_2816 PF05544 Proline racemase NT98_2817 PF05544 Proline racemase NT98_2818 PF00701 Dihydrodipicolinate synthetase family NT98_2819 PF00701 Dihydrodipicolinate synthetase family NT98_282 PF00162 Phosphoglycerate kinase NT98_2820 PF00171 Aldehyde dehydrogenase family NT98_2821 PF01235 Sodium:alanine symporter family NT98_2822 PF02627 Carboxymuconolactone decarboxylase family NT98_2823 PF03193 RsgA GTPase NT98_2825 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading NT98_2825 PF18416 N-acetylglucosamine binding protein domain 2 NT98_2826 PF02833 DHHA2 domain NT98_2826 PF01368 DHH family NT98_283 PF00121 Triosephosphate isomerase NT98_2835 PF00270 DEAD/DEAH box helicase NT98_2835 PF00570 HRDC domain NT98_2835 PF09382 RQC domain NT98_2835 PF00271 Helicase conserved C-terminal domain NT98_2835 PF16124 RecQ zinc-binding NT98_2836 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like NT98_2839 PF13538 UvrD-like helicase C-terminal domain NT98_284 PF06415 BPG-independent PGAM N-terminus (iPGM_N) NT98_284 PF01676 Metalloenzyme superfamily NT98_2845 PF00583 Acetyltransferase (GNAT) family NT98_2848 PF03772 Competence protein NT98_2848 PF00753 Metallo-beta-lactamase superfamily NT98_2848 PF13567 Domain of unknown function (DUF4131) NT98_285 PF03952 Enolase, N-terminal domain NT98_285 PF00113 Enolase, C-terminal TIM barrel domain NT98_2850 PF04237 YjbR NT98_2851 PF08241 Methyltransferase domain NT98_2852 PF10990 Protein of unknown function (DUF2809) NT98_2854 PF03781 Sulfatase-modifying factor enzyme 1 NT98_2855 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase NT98_2856 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading NT98_2856 PF18416 N-acetylglucosamine binding protein domain 2 NT98_2857 PF13673 Acetyltransferase (GNAT) domain NT98_2858 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) NT98_286 PF01156 Inosine-uridine preferring nucleoside hydrolase NT98_2861 PF00574 Clp protease NT98_2862 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NT98_2863 PF00005 ABC transporter NT98_2863 PF00571 CBS domain NT98_2864 PF00528 Binding-protein-dependent transport system inner membrane component NT98_287 PF03788 LrgA family NT98_2870 PF00485 Phosphoribulokinase / Uridine kinase family NT98_2871 PF13673 Acetyltransferase (GNAT) domain NT98_2871 PF04229 GrpB protein NT98_2872 PF00106 short chain dehydrogenase NT98_2874 PF00676 Dehydrogenase E1 component NT98_2875 PF02779 Transketolase, pyrimidine binding domain NT98_2875 PF02780 Transketolase, C-terminal domain NT98_2876 PF02817 e3 binding domain NT98_2876 PF00364 Biotin-requiring enzyme NT98_2876 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NT98_2877 PF07992 Pyridine nucleotide-disulphide oxidoreductase NT98_2877 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NT98_288 PF04172 LrgB-like family NT98_2880 PF00455 DeoR C terminal sensor domain NT98_2880 PF08220 DeoR-like helix-turn-helix domain NT98_2881 PF13302 Acetyltransferase (GNAT) domain NT98_2883 PF00158 Sigma-54 interaction domain NT98_2883 PF01590 GAF domain NT98_2883 PF02954 Bacterial regulatory protein, Fis family NT98_2887 PF00440 Bacterial regulatory proteins, tetR family NT98_2887 PF08359 YsiA-like protein, C-terminal region NT98_2888 PF00266 Aminotransferase class-V NT98_2889 PF04199 Putative cyclase NT98_289 PF03840 Preprotein translocase SecG subunit NT98_2890 PF03301 Tryptophan 2,3-dioxygenase NT98_2895 PF07486 Cell Wall Hydrolase NT98_2895 PF01471 Putative peptidoglycan binding domain NT98_2896 PF14620 YpeB sporulation NT98_2896 PF03413 Peptidase propeptide and YPEB domain NT98_2897 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) NT98_290 PF12146 Serine aminopeptidase, S33 NT98_2907 PF00561 alpha/beta hydrolase fold NT98_2908 PF00107 Zinc-binding dehydrogenase NT98_2908 PF08240 Alcohol dehydrogenase GroES-like domain NT98_291 PF00575 S1 RNA binding domain NT98_291 PF00773 RNB domain NT98_291 PF17876 Cold shock domain NT98_291 PF08206 Ribonuclease B OB domain NT98_2910 PF00392 Bacterial regulatory proteins, gntR family NT98_2910 PF00155 Aminotransferase class I and II NT98_2911 PF00892 EamA-like transporter family NT98_2912 PF00308 Bacterial dnaA protein NT98_2912 PF11638 DnaA N-terminal domain NT98_2912 PF08299 Bacterial dnaA protein helix-turn-helix NT98_2913 PF00344 SecY translocase NT98_2914 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NT98_2916 PF07504 Fungalysin/Thermolysin Propeptide Motif NT98_2916 PF02868 Thermolysin metallopeptidase, alpha-helical domain NT98_2916 PF03413 Peptidase propeptide and YPEB domain NT98_2916 PF01447 Thermolysin metallopeptidase, catalytic domain NT98_2917 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NT98_2917 PF03714 Bacterial pullanase-associated domain NT98_2917 PF00128 Alpha amylase, catalytic domain NT98_2918 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NT98_2918 PF00128 Alpha amylase, catalytic domain NT98_2918 PF17999 Pullulanase N1-terminal domain NT98_2919 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NT98_2919 PF03714 Bacterial pullanase-associated domain NT98_2919 PF00128 Alpha amylase, catalytic domain NT98_292 PF01668 SmpB protein NT98_2920 PF01569 PAP2 superfamily NT98_2929 PF01266 FAD dependent oxidoreductase NT98_2932 PF01609 Transposase DDE domain NT98_2933 PF01609 Transposase DDE domain NT98_2934 PF01609 Transposase DDE domain NT98_2938 PF00392 Bacterial regulatory proteins, gntR family NT98_2938 PF00155 Aminotransferase class I and II NT98_2939 PF00892 EamA-like transporter family NT98_294 PF00486 Transcriptional regulatory protein, C terminal NT98_294 PF00072 Response regulator receiver domain NT98_2940 PF00892 EamA-like transporter family NT98_2941 PF01270 Glycosyl hydrolases family 8 NT98_2942 PF01156 Inosine-uridine preferring nucleoside hydrolase NT98_2944 PF01784 NIF3 (NGG1p interacting factor 3) NT98_2945 PF13344 Haloacid dehalogenase-like hydrolase NT98_2945 PF00293 NUDIX domain NT98_2949 PF07690 Major Facilitator Superfamily NT98_2952 PF00293 NUDIX domain NT98_2952 PF09297 NADH pyrophosphatase zinc ribbon domain NT98_2952 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain NT98_2953 PF00712 DNA polymerase III beta subunit, N-terminal domain NT98_2953 PF02767 DNA polymerase III beta subunit, central domain NT98_2953 PF02768 DNA polymerase III beta subunit, C-terminal domain NT98_2954 PF00712 DNA polymerase III beta subunit, N-terminal domain NT98_2954 PF02768 DNA polymerase III beta subunit, C-terminal domain NT98_2954 PF02767 DNA polymerase III beta subunit, central domain NT98_2955 PF00293 NUDIX domain NT98_2958 PF12706 Beta-lactamase superfamily domain NT98_296 PF01032 FecCD transport family NT98_2960 PF09234 Domain of unknown function (DUF1963) NT98_2964 PF01734 Patatin-like phospholipase NT98_2965 PF08000 Bacterial PH domain NT98_2967 PF12867 DinB superfamily NT98_297 PF01032 FecCD transport family NT98_2971 PF02673 Bacitracin resistance protein BacA NT98_2973 PF01541 GIY-YIG catalytic domain NT98_298 PF00005 ABC transporter NT98_2980 PF01609 Transposase DDE domain NT98_2981 PF01609 Transposase DDE domain NT98_2982 PF01609 Transposase DDE domain NT98_2985 PF01609 Transposase DDE domain NT98_299 PF06146 Phosphate-starvation-inducible E NT98_2990 PF01609 Transposase DDE domain NT98_2991 PF01609 Transposase DDE domain NT98_2993 PF03009 Glycerophosphoryl diester phosphodiesterase family NT98_2994 PF03009 Glycerophosphoryl diester phosphodiesterase family NT98_3 PF03458 UPF0126 domain NT98_30 PF00860 Permease family NT98_3001 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NT98_3001 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NT98_3002 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NT98_3002 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NT98_3003 PF07690 Major Facilitator Superfamily NT98_3006 PF01965 DJ-1/PfpI family NT98_3014 PF01569 PAP2 superfamily NT98_3015 PF00107 Zinc-binding dehydrogenase NT98_3015 PF08240 Alcohol dehydrogenase GroES-like domain NT98_3016 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_3016 PF00512 His Kinase A (phospho-acceptor) domain NT98_3016 PF18719 ArlS sensor domain NT98_3017 PF00072 Response regulator receiver domain NT98_3017 PF00486 Transcriptional regulatory protein, C terminal NT98_3019 PF04229 GrpB protein NT98_3022 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_3022 PF00512 His Kinase A (phospho-acceptor) domain NT98_3025 PF00005 ABC transporter NT98_3025 PF12558 ATP-binding cassette cobalt transporter NT98_3026 PF07155 ECF-type riboflavin transporter, S component NT98_3027 PF01177 Asp/Glu/Hydantoin racemase NT98_3028 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase NT98_3029 PF13426 PAS domain NT98_3029 PF00989 PAS fold NT98_3029 PF00512 His Kinase A (phospho-acceptor) domain NT98_3029 PF13188 PAS domain NT98_3029 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_303 PF13302 Acetyltransferase (GNAT) domain NT98_3032 PF00067 Cytochrome P450 NT98_3033 PF00067 Cytochrome P450 NT98_3035 PF07561 Domain of Unknown Function (DUF1540) NT98_3036 PF00132 Bacterial transferase hexapeptide (six repeats) NT98_3038 PF00067 Cytochrome P450 NT98_304 PF12848 ABC transporter NT98_304 PF00005 ABC transporter NT98_3048 PF03070 TENA/THI-4/PQQC family NT98_3049 PF01820 D-ala D-ala ligase N-terminus NT98_3049 PF07478 D-ala D-ala ligase C-terminus NT98_305 PF07690 Major Facilitator Superfamily NT98_3050 PF07478 D-ala D-ala ligase C-terminus NT98_3050 PF01820 D-ala D-ala ligase N-terminus NT98_3051 PF00392 Bacterial regulatory proteins, gntR family NT98_3051 PF00155 Aminotransferase class I and II NT98_3052 PF00392 Bacterial regulatory proteins, gntR family NT98_3053 PF01842 ACT domain NT98_3053 PF00742 Homoserine dehydrogenase NT98_3053 PF03447 Homoserine dehydrogenase, NAD binding domain NT98_3057 PF02687 FtsX-like permease family NT98_3058 PF02687 FtsX-like permease family NT98_3059 PF00005 ABC transporter NT98_3064 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_3066 PF00486 Transcriptional regulatory protein, C terminal NT98_3066 PF00072 Response regulator receiver domain NT98_3068 PF03069 Acetamidase/Formamidase family NT98_3069 PF07486 Cell Wall Hydrolase NT98_3070 PF01921 tRNA synthetases class I (K) NT98_3072 PF08450 SMP-30/Gluconolactonase/LRE-like region NT98_3074 PF01225 Mur ligase family, catalytic domain NT98_3074 PF02875 Mur ligase family, glutamate ligase domain NT98_3074 PF08245 Mur ligase middle domain NT98_3075 PF08241 Methyltransferase domain NT98_3076 PF04239 Protein of unknown function (DUF421) NT98_308 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NT98_3080 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal NT98_3080 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal NT98_3081 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal NT98_3081 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal NT98_3083 PF00155 Aminotransferase class I and II NT98_3083 PF00392 Bacterial regulatory proteins, gntR family NT98_3086 PF12833 Helix-turn-helix domain NT98_3087 PF01636 Phosphotransferase enzyme family NT98_309 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NT98_3091 PF13847 Methyltransferase domain NT98_3093 PF07690 Major Facilitator Superfamily NT98_3097 PF02868 Thermolysin metallopeptidase, alpha-helical domain NT98_3097 PF01447 Thermolysin metallopeptidase, catalytic domain NT98_3097 PF03413 Peptidase propeptide and YPEB domain NT98_3097 PF07504 Fungalysin/Thermolysin Propeptide Motif NT98_31 PF07885 Ion channel NT98_31 PF02254 TrkA-N domain NT98_3101 PF01048 Phosphorylase superfamily NT98_3102 PF13021 Domain of unknown function (DUF3885) NT98_3103 PF01966 HD domain NT98_3104 PF00072 Response regulator receiver domain NT98_3104 PF00486 Transcriptional regulatory protein, C terminal NT98_3105 PF00512 His Kinase A (phospho-acceptor) domain NT98_3105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_3106 PF07943 Penicillin-binding protein 5, C-terminal domain NT98_3106 PF00768 D-alanyl-D-alanine carboxypeptidase NT98_3107 PF05163 DinB family NT98_311 PF17202 Single cache domain 3 NT98_311 PF00672 HAMP domain NT98_311 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NT98_3110 PF00485 Phosphoribulokinase / Uridine kinase family NT98_3114 PF13193 AMP-binding enzyme C-terminal domain NT98_3114 PF00501 AMP-binding enzyme NT98_3114 PF16177 Acetyl-coenzyme A synthetase N-terminus NT98_3115 PF01039 Carboxyl transferase domain NT98_3116 PF00378 Enoyl-CoA hydratase/isomerase NT98_3117 PF00682 HMGL-like NT98_3118 PF00364 Biotin-requiring enzyme NT98_3119 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NT98_3119 PF00289 Biotin carboxylase, N-terminal domain NT98_3119 PF02785 Biotin carboxylase C-terminal domain NT98_3120 PF02770 Acyl-CoA dehydrogenase, middle domain NT98_3120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NT98_3120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NT98_3123 PF08359 YsiA-like protein, C-terminal region NT98_3123 PF00440 Bacterial regulatory proteins, tetR family NT98_3125 PF00005 ABC transporter NT98_3127 PF00149 Calcineurin-like phosphoesterase NT98_313 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NT98_313 PF01565 FAD binding domain NT98_3132 PF08281 Sigma-70, region 4 NT98_3132 PF04542 Sigma-70 region 2 NT98_3133 PF05223 NTF2-like N-terminal transpeptidase domain NT98_3133 PF03717 Penicillin-binding Protein dimerisation domain NT98_3133 PF00905 Penicillin binding protein transpeptidase domain NT98_3134 PF03717 Penicillin-binding Protein dimerisation domain NT98_3134 PF00905 Penicillin binding protein transpeptidase domain NT98_3134 PF05223 NTF2-like N-terminal transpeptidase domain NT98_3136 PF01522 Polysaccharide deacetylase NT98_3136 PF11738 Protein of unknown function (DUF3298) NT98_3136 PF13739 Deacetylase PdaC NT98_3137 PF00355 Rieske [2Fe-2S] domain NT98_3138 PF00282 Pyridoxal-dependent decarboxylase conserved domain NT98_314 PF01479 S4 domain NT98_314 PF00579 tRNA synthetases class I (W and Y) NT98_3144 PF03313 Serine dehydratase alpha chain NT98_3145 PF03315 Serine dehydratase beta chain NT98_3145 PF01842 ACT domain NT98_3147 PF00027 Cyclic nucleotide-binding domain NT98_3147 PF01734 Patatin-like phospholipase NT98_3149 PF00132 Bacterial transferase hexapeptide (six repeats) NT98_315 PF07992 Pyridine nucleotide-disulphide oxidoreductase NT98_3152 PF07687 Peptidase dimerisation domain NT98_3152 PF01546 Peptidase family M20/M25/M40 NT98_3154 PF14171 Toxin SpoIISA, type II toxin-antitoxin system NT98_3155 PF00300 Histidine phosphatase superfamily (branch 1) NT98_3156 PF01047 MarR family NT98_3157 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NT98_3157 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NT98_3157 PF00205 Thiamine pyrophosphate enzyme, central domain NT98_3158 PF00205 Thiamine pyrophosphate enzyme, central domain NT98_3158 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NT98_3158 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NT98_3159 PF08241 Methyltransferase domain NT98_316 PF07849 Protein of unknown function (DUF1641) NT98_3161 PF09313 Domain of unknown function (DUF1971) NT98_3161 PF03848 Tellurite resistance protein TehB NT98_3162 PF12704 MacB-like periplasmic core domain NT98_3162 PF02687 FtsX-like permease family NT98_3162 PF00005 ABC transporter NT98_3165 PF00440 Bacterial regulatory proteins, tetR family NT98_3165 PF17932 Tetracyclin repressor-like, C-terminal domain NT98_3169 PF01609 Transposase DDE domain NT98_3171 PF00270 DEAD/DEAH box helicase NT98_3171 PF00271 Helicase conserved C-terminal domain NT98_3174 PF12323 Helix-turn-helix domain NT98_3174 PF01385 Probable transposase NT98_3174 PF07282 Putative transposase DNA-binding domain NT98_3175 PF00753 Metallo-beta-lactamase superfamily NT98_3175 PF16123 Hydroxyacylglutathione hydrolase C-terminus NT98_3179 PF07690 Major Facilitator Superfamily NT98_318 PF01638 HxlR-like helix-turn-helix NT98_3180 PF01047 MarR family NT98_3181 PF00291 Pyridoxal-phosphate dependent enzyme NT98_3182 PF00266 Aminotransferase class-V NT98_3183 PF02660 Glycerol-3-phosphate acyltransferase NT98_3184 PF01869 BadF/BadG/BcrA/BcrD ATPase family NT98_3185 PF03702 Anhydro-N-acetylmuramic acid kinase NT98_3187 PF02378 Phosphotransferase system, EIIC NT98_3189 PF02638 Glycosyl hydrolase-like 10 NT98_319 PF07690 Major Facilitator Superfamily NT98_3194 PF12680 SnoaL-like domain NT98_3194 PF08281 Sigma-70, region 4 NT98_3194 PF04542 Sigma-70 region 2 NT98_3196 PF02824 TGS domain NT98_3196 PF04607 Region found in RelA / SpoT proteins NT98_3196 PF13291 ACT domain NT98_320 PF00248 Aldo/keto reductase family NT98_3201 PF07883 Cupin domain NT98_3201 PF01381 Helix-turn-helix NT98_3202 PF01810 LysE type translocator NT98_3205 PF00005 ABC transporter NT98_3205 PF00664 ABC transporter transmembrane region NT98_3206 PF00005 ABC transporter NT98_3206 PF00664 ABC transporter transmembrane region NT98_3210 PF03475 3-alpha domain NT98_3210 PF03473 MOSC domain NT98_3211 PF03466 LysR substrate binding domain NT98_3211 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NT98_3214 PF01118 Semialdehyde dehydrogenase, NAD binding domain NT98_3214 PF02774 Semialdehyde dehydrogenase, dimerisation domain NT98_3215 PF03466 LysR substrate binding domain NT98_3215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NT98_3221 PF00313 'Cold-shock' DNA-binding domain NT98_3223 PF13302 Acetyltransferase (GNAT) domain NT98_3226 PF00561 alpha/beta hydrolase fold NT98_323 PF13460 NAD(P)H-binding NT98_3231 PF00583 Acetyltransferase (GNAT) family NT98_3233 PF00302 Chloramphenicol acetyltransferase NT98_3235 PF03176 MMPL family NT98_3238 PF01047 MarR family NT98_324 PF01235 Sodium:alanine symporter family NT98_3246 PF13649 Methyltransferase domain NT98_3248 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NT98_3248 PF00205 Thiamine pyrophosphate enzyme, central domain NT98_3248 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NT98_3249 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NT98_3249 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NT98_3249 PF00205 Thiamine pyrophosphate enzyme, central domain NT98_325 PF01235 Sodium:alanine symporter family NT98_3252 PF07690 Major Facilitator Superfamily NT98_3254 PF00005 ABC transporter NT98_3255 PF11188 Protein of unknown function (DUF2975) NT98_3256 PF02824 TGS domain NT98_3256 PF03129 Anticodon binding domain NT98_3256 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NT98_3256 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NT98_3257 PF00849 RNA pseudouridylate synthase NT98_3257 PF01479 S4 domain NT98_3258 PF16291 Domain of unknown function (DUF4937 NT98_326 PF07662 Na+ dependent nucleoside transporter C-terminus NT98_326 PF01773 Na+ dependent nucleoside transporter N-terminus NT98_3261 PF01235 Sodium:alanine symporter family NT98_3262 PF00082 Subtilase family NT98_3263 PF05163 DinB family NT98_3265 PF00216 Bacterial DNA-binding protein NT98_3268 PF07690 Major Facilitator Superfamily NT98_3269 PF03621 MbtH-like protein NT98_327 PF07662 Na+ dependent nucleoside transporter C-terminus NT98_327 PF01773 Na+ dependent nucleoside transporter N-terminus NT98_3270 PF00501 AMP-binding enzyme NT98_3270 PF00668 Condensation domain NT98_3270 PF00550 Phosphopantetheine attachment site NT98_3270 PF00975 Thioesterase domain NT98_3270 PF13193 AMP-binding enzyme C-terminal domain NT98_3271 PF00550 Phosphopantetheine attachment site NT98_3271 PF00857 Isochorismatase family NT98_3272 PF00501 AMP-binding enzyme NT98_3272 PF13193 AMP-binding enzyme C-terminal domain NT98_3273 PF00425 chorismate binding enzyme NT98_3274 PF00106 short chain dehydrogenase NT98_3275 PF07690 Major Facilitator Superfamily NT98_3277 PF01022 Bacterial regulatory protein, arsR family NT98_3279 PF13476 AAA domain NT98_3280 PF00149 Calcineurin-like phosphoesterase NT98_3280 PF12320 Type 5 capsule protein repressor C-terminal domain NT98_3281 PF10763 Protein of unknown function (DUF2584) NT98_3283 PF00378 Enoyl-CoA hydratase/isomerase NT98_3284 PF01810 LysE type translocator NT98_3285 PF00171 Aldehyde dehydrogenase family NT98_3286 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NT98_3286 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NT98_3287 PF02770 Acyl-CoA dehydrogenase, middle domain NT98_3287 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NT98_3287 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NT98_3289 PF03972 MmgE/PrpD family NT98_329 PF00210 Ferritin-like domain NT98_3290 PF00285 Citrate synthase, C-terminal domain NT98_3291 PF01521 Iron-sulphur cluster biosynthesis NT98_3292 PF07690 Major Facilitator Superfamily NT98_3294 PF00912 Transglycosylase NT98_3294 PF00905 Penicillin binding protein transpeptidase domain NT98_33 PF04241 Protein of unknown function (DUF423) NT98_3301 PF10676 Spore germination protein gerPA/gerPF NT98_331 PF03641 Possible lysine decarboxylase NT98_3311 PF04542 Sigma-70 region 2 NT98_3311 PF08281 Sigma-70, region 4 NT98_3321 PF00085 Thioredoxin NT98_3322 PF01569 PAP2 superfamily NT98_3323 PF16916 Dimerisation domain of Zinc Transporter NT98_3323 PF01545 Cation efflux family NT98_3324 PF07070 SpoOM protein NT98_3325 PF00069 Protein kinase domain NT98_3325 PF08239 Bacterial SH3 domain NT98_3327 PF14162 YozD-like protein NT98_3330 PF06855 YozE SAM-like fold NT98_3331 PF14122 YokU-like protein, putative antitoxin NT98_3332 PF12544 Lysine-2,3-aminomutase NT98_3333 PF13426 PAS domain NT98_3333 PF00158 Sigma-54 interaction domain NT98_3333 PF02954 Bacterial regulatory protein, Fis family NT98_3334 PF00583 Acetyltransferase (GNAT) family NT98_3335 PF01546 Peptidase family M20/M25/M40 NT98_3335 PF07687 Peptidase dimerisation domain NT98_3336 PF01144 Coenzyme A transferase NT98_3337 PF01144 Coenzyme A transferase NT98_3338 PF00202 Aminotransferase class-III NT98_334 PF00210 Ferritin-like domain NT98_3340 PF09385 Histidine kinase N terminal NT98_3341 PF07997 Protein of unknown function (DUF1694) NT98_3342 PF00171 Aldehyde dehydrogenase family NT98_3343 PF03471 Transporter associated domain NT98_3343 PF01595 Cyclin M transmembrane N-terminal domain NT98_3343 PF00571 CBS domain NT98_3349 PF13520 Amino acid permease NT98_335 PF01235 Sodium:alanine symporter family NT98_3350 PF00528 Binding-protein-dependent transport system inner membrane component NT98_3351 PF00005 ABC transporter NT98_3351 PF00571 CBS domain NT98_3355 PF03358 NADPH-dependent FMN reductase NT98_3358 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NT98_3358 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NT98_3359 PF02447 GntP family permease NT98_336 PF02080 TrkA-C domain NT98_3360 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NT98_3360 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NT98_3363 PF00144 Beta-lactamase NT98_3366 PF08240 Alcohol dehydrogenase GroES-like domain NT98_3366 PF00107 Zinc-binding dehydrogenase NT98_3367 PF01380 SIS domain NT98_3367 PF01418 Helix-turn-helix domain, rpiR family NT98_3368 PF00196 Bacterial regulatory proteins, luxR family NT98_3368 PF00072 Response regulator receiver domain NT98_3369 PF07730 Histidine kinase NT98_3369 PF13185 GAF domain NT98_337 PF00999 Sodium/hydrogen exchanger family NT98_3370 PF00924 Mechanosensitive ion channel NT98_3371 PF00857 Isochorismatase family NT98_3373 PF00881 Nitroreductase family NT98_3374 PF01063 Amino-transferase class IV NT98_3375 PF01497 Periplasmic binding protein NT98_3379 PF13537 Glutamine amidotransferase domain NT98_3379 PF00733 Asparagine synthase NT98_338 PF09335 SNARE associated Golgi protein NT98_3380 PF00011 Hsp20/alpha crystallin family NT98_3381 PF02630 SCO1/SenC NT98_3383 PF02645 Uncharacterised protein, DegV family COG1307 NT98_3385 PF00902 Sec-independent protein translocase protein (TatC) NT98_3386 PF02416 mttA/Hcf106 family NT98_3387 PF03006 Haemolysin-III related NT98_3388 PF01553 Acyltransferase NT98_3389 PF02525 Flavodoxin-like fold NT98_3390 PF03717 Penicillin-binding Protein dimerisation domain NT98_3390 PF00905 Penicillin binding protein transpeptidase domain NT98_3390 PF05223 NTF2-like N-terminal transpeptidase domain NT98_3391 PF00186 Dihydrofolate reductase NT98_3392 PF00303 Thymidylate synthase NT98_3393 PF00144 Beta-lactamase NT98_3393 PF07930 D-aminopeptidase, domain B NT98_3396 PF13419 Haloacid dehalogenase-like hydrolase NT98_3397 PF14005 YpjP-like protein NT98_3398 PF05975 Bacterial ABC transporter protein EcsB NT98_3399 PF00005 ABC transporter NT98_34 PF09671 Spore coat protein (Spore_GerQ) NT98_340 PF01047 MarR family NT98_3402 PF00583 Acetyltransferase (GNAT) family NT98_3403 PF01980 tRNA-methyltransferase O NT98_3404 PF01177 Asp/Glu/Hydantoin racemase NT98_3405 PF00465 Iron-containing alcohol dehydrogenase NT98_3407 PF13419 Haloacid dehalogenase-like hydrolase NT98_3408 PF13419 Haloacid dehalogenase-like hydrolase NT98_3409 PF10997 Alternate to MurJ NT98_341 PF17954 Quercetinase C-terminal cupin domain NT98_341 PF02678 Pirin NT98_3412 PF00209 Sodium:neurotransmitter symporter family NT98_3414 PF02595 Glycerate kinase family NT98_3415 PF01336 OB-fold nucleic acid binding domain NT98_3415 PF00152 tRNA synthetases class II (D, K and N) NT98_3418 PF08264 Anticodon-binding domain of tRNA NT98_3418 PF00133 tRNA synthetases class I (I, L, M and V) NT98_342 PF02868 Thermolysin metallopeptidase, alpha-helical domain NT98_342 PF01447 Thermolysin metallopeptidase, catalytic domain NT98_342 PF03413 Peptidase propeptide and YPEB domain NT98_342 PF07504 Fungalysin/Thermolysin Propeptide Motif NT98_3422 PF05746 DALR anticodon binding domain NT98_3422 PF00750 tRNA synthetases class I (R) NT98_3422 PF03485 Arginyl tRNA synthetase N terminal domain NT98_3423 PF04445 Putative SAM-dependent methyltransferase NT98_3425 PF06491 Disulphide isomerase NT98_3427 PF08712 Scaffold protein Nfu/NifU N terminal NT98_3427 PF13769 Virulence factor NT98_3428 PF00436 Single-strand binding protein family NT98_343 PF01883 Iron-sulfur cluster assembly protein NT98_3431 PF12848 ABC transporter NT98_3431 PF16326 ABC transporter C-terminal domain NT98_3431 PF00005 ABC transporter NT98_3432 PF01966 HD domain NT98_3434 PF04232 Stage V sporulation protein S (SpoVS) NT98_344 PF00672 HAMP domain NT98_344 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NT98_344 PF02743 Cache domain NT98_3440 PF04405 Domain of Unknown function (DUF542) NT98_3440 PF01814 Hemerythrin HHE cation binding domain NT98_3441 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NT98_3441 PF18267 Rubredoxin NAD+ reductase C-terminal domain NT98_3441 PF04324 BFD-like [2Fe-2S] binding domain NT98_3441 PF07992 Pyridine nucleotide-disulphide oxidoreductase NT98_3441 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NT98_3442 PF00355 Rieske [2Fe-2S] domain NT98_3443 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NT98_3444 PF01903 CbiX NT98_3449 PF07690 Major Facilitator Superfamily NT98_345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NT98_345 PF02743 Cache domain NT98_345 PF00672 HAMP domain NT98_3451 PF02391 MoaE protein NT98_3452 PF03454 MoeA C-terminal region (domain IV) NT98_3452 PF00994 Probable molybdopterin binding domain NT98_3452 PF03453 MoeA N-terminal region (domain I and II) NT98_3453 PF00899 ThiF family NT98_3454 PF06463 Molybdenum Cofactor Synthesis C NT98_3454 PF04055 Radical SAM superfamily NT98_3455 PF00027 Cyclic nucleotide-binding domain NT98_3455 PF00325 Bacterial regulatory proteins, crp family NT98_3457 PF00005 ABC transporter NT98_3458 PF00392 Bacterial regulatory proteins, gntR family NT98_3458 PF00155 Aminotransferase class I and II NT98_3460 PF02665 Nitrate reductase gamma subunit NT98_3461 PF02613 Nitrate reductase delta subunit NT98_3462 PF14711 Respiratory nitrate reductase beta C-terminal NT98_3462 PF13247 4Fe-4S dicluster domain NT98_3463 PF14710 Respiratory nitrate reductase alpha N-terminal NT98_3463 PF00384 Molybdopterin oxidoreductase NT98_3463 PF01568 Molydopterin dinucleotide binding domain NT98_3464 PF07726 ATPase family associated with various cellular activities (AAA) NT98_3464 PF17863 AAA lid domain NT98_3465 PF01882 Protein of unknown function DUF58 NT98_3466 PF01841 Transglutaminase-like superfamily NT98_3466 PF13559 Domain of unknown function (DUF4129) NT98_3466 PF11992 Domain of unknown function (DUF3488) NT98_3467 PF00255 Glutathione peroxidase NT98_347 PF09334 tRNA synthetases class I (M) NT98_347 PF08264 Anticodon-binding domain of tRNA NT98_3471 PF03109 ABC1 family NT98_3474 PF08281 Sigma-70, region 4 NT98_3474 PF04542 Sigma-70 region 2 NT98_3475 PF00107 Zinc-binding dehydrogenase NT98_3475 PF08240 Alcohol dehydrogenase GroES-like domain NT98_3477 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NT98_3478 PF00271 Helicase conserved C-terminal domain NT98_3478 PF00270 DEAD/DEAH box helicase NT98_3480 PF01268 Formate--tetrahydrofolate ligase NT98_3481 PF01209 ubiE/COQ5 methyltransferase family NT98_3486 PF09579 Sporulation protein YtfJ (Spore_YtfJ) NT98_349 PF00512 His Kinase A (phospho-acceptor) domain NT98_349 PF16736 Single Cache-like NT98_349 PF00989 PAS fold NT98_349 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_3493 PF00583 Acetyltransferase (GNAT) family NT98_3499 PF00392 Bacterial regulatory proteins, gntR family NT98_3499 PF00155 Aminotransferase class I and II NT98_35 PF07486 Cell Wall Hydrolase NT98_350 PF00486 Transcriptional regulatory protein, C terminal NT98_350 PF00072 Response regulator receiver domain NT98_3500 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) NT98_3500 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 NT98_3501 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase NT98_3506 PF01168 Alanine racemase, N-terminal domain NT98_3506 PF00842 Alanine racemase, C-terminal domain NT98_3509 PF00300 Histidine phosphatase superfamily (branch 1) NT98_351 PF17969 L,D-transpeptidase C-terminal domain NT98_351 PF03734 L,D-transpeptidase catalytic domain NT98_3513 PF01145 SPFH domain / Band 7 family NT98_3515 PF07690 Major Facilitator Superfamily NT98_3518 PF02557 D-alanyl-D-alanine carboxypeptidase NT98_3520 PF07454 Stage II sporulation protein P (SpoIIP) NT98_3523 PF01588 Putative tRNA binding domain NT98_3524 PF05525 Branched-chain amino acid transport protein NT98_3527 PF00571 CBS domain NT98_3527 PF03471 Transporter associated domain NT98_3527 PF01595 Cyclin M transmembrane N-terminal domain NT98_3528 PF04306 Protein of unknown function (DUF456) NT98_3529 PF13460 NAD(P)H-binding NT98_353 PF09335 SNARE associated Golgi protein NT98_3532 PF13396 Phospholipase_D-nuclease N-terminal NT98_3532 PF13091 PLD-like domain NT98_3533 PF03061 Thioesterase superfamily NT98_3534 PF09323 Domain of unknown function (DUF1980) NT98_3535 PF03773 Predicted permease NT98_3537 PF14667 Polysaccharide biosynthesis C-terminal domain NT98_3537 PF01943 Polysaccharide biosynthesis protein NT98_3538 PF09335 SNARE associated Golgi protein NT98_3539 PF00293 NUDIX domain NT98_3540 PF08757 CotH kinase protein NT98_3542 PF00300 Histidine phosphatase superfamily (branch 1) NT98_3544 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NT98_3545 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NT98_3547 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NT98_3547 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NT98_3548 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NT98_3549 PF13460 NAD(P)H-binding NT98_3551 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment NT98_3551 PF01297 Zinc-uptake complex component A periplasmic NT98_3552 PF00583 Acetyltransferase (GNAT) family NT98_3553 PF07683 Cobalamin synthesis protein cobW C-terminal domain NT98_3553 PF02492 CobW/HypB/UreG, nucleotide-binding domain NT98_3554 PF00248 Aldo/keto reductase family NT98_3555 PF13302 Acetyltransferase (GNAT) domain NT98_3556 PF01593 Flavin containing amine oxidoreductase NT98_3558 PF00296 Luciferase-like monooxygenase NT98_3561 PF00210 Ferritin-like domain NT98_3565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NT98_3565 PF00672 HAMP domain NT98_3565 PF02743 Cache domain NT98_3566 PF03193 RsgA GTPase NT98_3570 PF07690 Major Facilitator Superfamily NT98_3571 PF00248 Aldo/keto reductase family NT98_3572 PF01022 Bacterial regulatory protein, arsR family NT98_3573 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain NT98_3573 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain NT98_3574 PF00082 Subtilase family NT98_3575 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin NT98_3575 PF18277 AbrB C-terminal domain NT98_3576 PF02687 FtsX-like permease family NT98_3577 PF02540 NAD synthase NT98_3578 PF00293 NUDIX domain NT98_3578 PF13344 Haloacid dehalogenase-like hydrolase NT98_3583 PF01734 Patatin-like phospholipase NT98_3585 PF00155 Aminotransferase class I and II NT98_3585 PF00392 Bacterial regulatory proteins, gntR family NT98_3586 PF01810 LysE type translocator NT98_3587 PF07690 Major Facilitator Superfamily NT98_3588 PF00269 Small, acid-soluble spore proteins, alpha/beta type NT98_3589 PF01261 Xylose isomerase-like TIM barrel NT98_3592 PF00501 AMP-binding enzyme NT98_3592 PF13193 AMP-binding enzyme C-terminal domain NT98_3593 PF04183 IucA / IucC family NT98_3593 PF06276 Ferric iron reductase FhuF-like transporter NT98_3594 PF04183 IucA / IucC family NT98_3594 PF06276 Ferric iron reductase FhuF-like transporter NT98_3595 PF00583 Acetyltransferase (GNAT) family NT98_3596 PF02308 MgtC family NT98_3598 PF01522 Polysaccharide deacetylase NT98_3599 PF16736 Single Cache-like NT98_3599 PF00512 His Kinase A (phospho-acceptor) domain NT98_3599 PF00989 PAS fold NT98_3599 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_36 PF07943 Penicillin-binding protein 5, C-terminal domain NT98_36 PF00768 D-alanyl-D-alanine carboxypeptidase NT98_3600 PF00072 Response regulator receiver domain NT98_3600 PF00486 Transcriptional regulatory protein, C terminal NT98_3602 PF03816 Cell envelope-related transcriptional attenuator domain NT98_3605 PF00288 GHMP kinases N terminal domain NT98_3605 PF08544 GHMP kinases C terminal NT98_3606 PF00291 Pyridoxal-phosphate dependent enzyme NT98_3607 PF03447 Homoserine dehydrogenase, NAD binding domain NT98_3607 PF00742 Homoserine dehydrogenase NT98_3607 PF01842 ACT domain NT98_361 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 NT98_361 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) NT98_3611 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain NT98_3611 PF01522 Polysaccharide deacetylase NT98_3612 PF04439 Streptomycin adenylyltransferase NT98_3614 PF00106 short chain dehydrogenase NT98_3615 PF00005 ABC transporter NT98_3619 PF00072 Response regulator receiver domain NT98_3619 PF00486 Transcriptional regulatory protein, C terminal NT98_3620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_3620 PF00512 His Kinase A (phospho-acceptor) domain NT98_3621 PF00989 PAS fold NT98_3621 PF16736 Single Cache-like NT98_3621 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_3621 PF00512 His Kinase A (phospho-acceptor) domain NT98_3622 PF00072 Response regulator receiver domain NT98_3622 PF00486 Transcriptional regulatory protein, C terminal NT98_3623 PF00664 ABC transporter transmembrane region NT98_3623 PF00005 ABC transporter NT98_3625 PF01476 LysM domain NT98_3625 PF00877 NlpC/P60 family NT98_3628 PF07943 Penicillin-binding protein 5, C-terminal domain NT98_3628 PF00768 D-alanyl-D-alanine carboxypeptidase NT98_3629 PF17676 LD-carboxypeptidase C-terminal domain NT98_3629 PF02016 LD-carboxypeptidase N-terminal domain NT98_363 PF02096 60Kd inner membrane protein NT98_3632 PF00132 Bacterial transferase hexapeptide (six repeats) NT98_3633 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NT98_3634 PF00535 Glycosyl transferase family 2 NT98_3636 PF00005 ABC transporter NT98_3636 PF00664 ABC transporter transmembrane region NT98_3637 PF00005 ABC transporter NT98_3637 PF00664 ABC transporter transmembrane region NT98_3638 PF02322 Cytochrome bd terminal oxidase subunit II NT98_3639 PF01654 Cytochrome bd terminal oxidase subunit I NT98_3642 PF01047 MarR family NT98_3643 PF14552 Tautomerase enzyme NT98_3645 PF03466 LysR substrate binding domain NT98_3645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NT98_3647 PF02653 Branched-chain amino acid transport system / permease component NT98_3648 PF00005 ABC transporter NT98_3649 PF00005 ABC transporter NT98_3649 PF12399 Branched-chain amino acid ATP-binding cassette transporter NT98_3652 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NT98_3652 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NT98_3653 PF01575 MaoC like domain NT98_3654 PF13193 AMP-binding enzyme C-terminal domain NT98_3654 PF00501 AMP-binding enzyme NT98_3656 PF02492 CobW/HypB/UreG, nucleotide-binding domain NT98_3656 PF07683 Cobalamin synthesis protein cobW C-terminal domain NT98_3657 PF01593 Flavin containing amine oxidoreductase NT98_3658 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NT98_3658 PF00056 lactate/malate dehydrogenase, NAD binding domain NT98_3659 PF01594 AI-2E family transporter NT98_366 PF13520 Amino acid permease NT98_3663 PF00881 Nitroreductase family NT98_3664 PF01323 DSBA-like thioredoxin domain NT98_3665 PF02082 Transcriptional regulator NT98_3666 PF03466 LysR substrate binding domain NT98_3666 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NT98_3667 PF00892 EamA-like transporter family NT98_3668 PF07987 Domain of unkown function (DUF1775) NT98_3669 PF04234 CopC domain NT98_3669 PF05425 Copper resistance protein D NT98_3669 PF13115 YtkA-like NT98_367 PF07690 Major Facilitator Superfamily NT98_3671 PF05525 Branched-chain amino acid transport protein NT98_3672 PF02525 Flavodoxin-like fold NT98_3675 PF12323 Helix-turn-helix domain NT98_3675 PF01385 Probable transposase NT98_3675 PF07282 Putative transposase DNA-binding domain NT98_3676 PF00733 Asparagine synthase NT98_3676 PF13537 Glutamine amidotransferase domain NT98_3677 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NT98_3677 PF03466 LysR substrate binding domain NT98_3685 PF01037 Lrp/AsnC ligand binding domain NT98_3690 PF07732 Multicopper oxidase NT98_3690 PF00394 Multicopper oxidase NT98_3690 PF07731 Multicopper oxidase NT98_3691 PF00557 Metallopeptidase family M24 NT98_3691 PF05195 Aminopeptidase P, N-terminal domain NT98_3695 PF05979 Bacterial protein of unknown function (DUF896) NT98_3696 PF07301 Protein of unknown function (DUF1453) NT98_3698 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NT98_3699 PF02885 Glycosyl transferase family, helical bundle domain NT98_3699 PF00591 Glycosyl transferase family, a/b domain NT98_3699 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain NT98_3700 PF07662 Na+ dependent nucleoside transporter C-terminus NT98_3700 PF01773 Na+ dependent nucleoside transporter N-terminus NT98_3701 PF01791 DeoC/LacD family aldolase NT98_3702 PF04198 Putative sugar-binding domain NT98_3703 PF00440 Bacterial regulatory proteins, tetR family NT98_3705 PF01906 Putative heavy-metal-binding NT98_3707 PF05791 Bacillus haemolytic enterotoxin (HBL) NT98_3708 PF05791 Bacillus haemolytic enterotoxin (HBL) NT98_3710 PF13520 Amino acid permease NT98_3712 PF02558 Ketopantoate reductase PanE/ApbA NT98_3712 PF08546 Ketopantoate reductase PanE/ApbA C terminal NT98_3715 PF01566 Natural resistance-associated macrophage protein NT98_3717 PF00512 His Kinase A (phospho-acceptor) domain NT98_3717 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_3718 PF00486 Transcriptional regulatory protein, C terminal NT98_3718 PF00072 Response regulator receiver domain NT98_3719 PF13302 Acetyltransferase (GNAT) domain NT98_372 PF00672 HAMP domain NT98_372 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NT98_372 PF02743 Cache domain NT98_3720 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NT98_3721 PF01979 Amidohydrolase family NT98_3724 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain NT98_3724 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain NT98_3725 PF00072 Response regulator receiver domain NT98_3725 PF04397 LytTr DNA-binding domain NT98_3726 PF00144 Beta-lactamase NT98_3728 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NT98_3729 PF07690 Major Facilitator Superfamily NT98_373 PF01910 Thiamine-binding protein NT98_3732 PF09587 Bacterial capsule synthesis protein PGA_cap NT98_3734 PF00291 Pyridoxal-phosphate dependent enzyme NT98_3734 PF00585 C-terminal regulatory domain of Threonine dehydratase NT98_3735 PF00920 Dehydratase family NT98_3736 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NT98_3736 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NT98_3738 PF00205 Thiamine pyrophosphate enzyme, central domain NT98_3738 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NT98_3738 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NT98_3739 PF01063 Amino-transferase class IV NT98_374 PF10835 Protein of unknown function (DUF2573) NT98_3740 PF01625 Peptide methionine sulfoxide reductase NT98_3744 PF04239 Protein of unknown function (DUF421) NT98_3746 PF03422 Carbohydrate binding module (family 6) NT98_3746 PF00457 Glycosyl hydrolases family 11 NT98_3746 PF01522 Polysaccharide deacetylase NT98_3747 PF00209 Sodium:neurotransmitter symporter family NT98_3748 PF01943 Polysaccharide biosynthesis protein NT98_3748 PF14667 Polysaccharide biosynthesis C-terminal domain NT98_375 PF01619 Proline dehydrogenase NT98_3751 PF00291 Pyridoxal-phosphate dependent enzyme NT98_3752 PF07690 Major Facilitator Superfamily NT98_3753 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NT98_3754 PF16360 GTP-binding GTPase Middle Region NT98_3754 PF13167 GTP-binding GTPase N-terminal NT98_3754 PF01926 50S ribosome-binding GTPase NT98_3756 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NT98_3756 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NT98_3758 PF07690 Major Facilitator Superfamily NT98_3759 PF03976 Polyphosphate kinase 2 (PPK2) NT98_376 PF07943 Penicillin-binding protein 5, C-terminal domain NT98_376 PF00768 D-alanyl-D-alanine carboxypeptidase NT98_3761 PF07690 Major Facilitator Superfamily NT98_3762 PF13302 Acetyltransferase (GNAT) domain NT98_3764 PF00395 S-layer homology domain NT98_3764 PF02368 Bacterial Ig-like domain (group 2) NT98_3765 PF00293 NUDIX domain NT98_3766 PF14158 YndJ-like protein NT98_3767 PF13761 Domain of unknown function (DUF4166) NT98_3769 PF13840 ACT domain NT98_3769 PF00696 Amino acid kinase family NT98_377 PF14115 YuzL-like protein NT98_3771 PF01381 Helix-turn-helix NT98_3772 PF03590 Aspartate-ammonia ligase NT98_3774 PF00176 SNF2 family N-terminal domain NT98_3774 PF12419 SNF2 Helicase protein NT98_3774 PF00271 Helicase conserved C-terminal domain NT98_3775 PF00072 Response regulator receiver domain NT98_3775 PF08664 YcbB domain NT98_3776 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_3777 PF00390 Malic enzyme, N-terminal domain NT98_3777 PF03949 Malic enzyme, NAD binding domain NT98_3778 PF10415 Fumarase C C-terminus NT98_3778 PF00206 Lyase NT98_3779 PF00375 Sodium:dicarboxylate symporter family NT98_378 PF00378 Enoyl-CoA hydratase/isomerase NT98_378 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NT98_378 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NT98_3780 PF00696 Amino acid kinase family NT98_3781 PF13091 PLD-like domain NT98_3786 PF00005 ABC transporter NT98_3787 PF13185 GAF domain NT98_3787 PF13492 GAF domain NT98_3787 PF07730 Histidine kinase NT98_3787 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_3788 PF00072 Response regulator receiver domain NT98_3788 PF00196 Bacterial regulatory proteins, luxR family NT98_379 PF02803 Thiolase, C-terminal domain NT98_379 PF00108 Thiolase, N-terminal domain NT98_3793 PF04286 Protein of unknown function (DUF445) NT98_3794 PF00291 Pyridoxal-phosphate dependent enzyme NT98_3798 PF00578 AhpC/TSA family NT98_3799 PF02683 Cytochrome C biogenesis protein transmembrane region NT98_38 PF01515 Phosphate acetyl/butaryl transferase NT98_380 PF02770 Acyl-CoA dehydrogenase, middle domain NT98_380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NT98_380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NT98_3803 PF03575 Peptidase family S51 NT98_3804 PF01554 MatE NT98_3808 PF00206 Lyase NT98_3808 PF10415 Fumarase C C-terminus NT98_381 PF00753 Metallo-beta-lactamase superfamily NT98_3810 PF00206 Lyase NT98_3810 PF10415 Fumarase C C-terminus NT98_3811 PF00106 short chain dehydrogenase NT98_3812 PF13411 MerR HTH family regulatory protein NT98_3813 PF03553 Na+/H+ antiporter family NT98_3814 PF00535 Glycosyl transferase family 2 NT98_3816 PF03773 Predicted permease NT98_3817 PF07683 Cobalamin synthesis protein cobW C-terminal domain NT98_3817 PF02492 CobW/HypB/UreG, nucleotide-binding domain NT98_3818 PF00892 EamA-like transporter family NT98_3819 PF07729 FCD domain NT98_3819 PF00392 Bacterial regulatory proteins, gntR family NT98_382 PF13305 Tetracyclin repressor-like, C-terminal domain NT98_382 PF00440 Bacterial regulatory proteins, tetR family NT98_3821 PF01545 Cation efflux family NT98_3821 PF16916 Dimerisation domain of Zinc Transporter NT98_3825 PF13537 Glutamine amidotransferase domain NT98_3825 PF00733 Asparagine synthase NT98_3827 PF01047 MarR family NT98_3829 PF00561 alpha/beta hydrolase fold NT98_3832 PF00300 Histidine phosphatase superfamily (branch 1) NT98_3833 PF13021 Domain of unknown function (DUF3885) NT98_3834 PF00768 D-alanyl-D-alanine carboxypeptidase NT98_3834 PF07943 Penicillin-binding protein 5, C-terminal domain NT98_3837 PF10787 Uncharacterised protein from bacillus cereus group NT98_3840 PF00528 Binding-protein-dependent transport system inner membrane component NT98_3842 PF08402 TOBE domain NT98_3842 PF00005 ABC transporter NT98_3848 PF08141 Small acid-soluble spore protein H family NT98_3849 PF04203 Sortase domain NT98_3850 PF04203 Sortase domain NT98_3851 PF05737 Collagen binding domain NT98_3851 PF17802 Prealbumin-like fold domain NT98_3851 PF05738 Cna protein B-type domain NT98_3855 PF03992 Antibiotic biosynthesis monooxygenase NT98_386 PF00056 lactate/malate dehydrogenase, NAD binding domain NT98_386 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NT98_3863 PF02272 DHHA1 domain NT98_3863 PF01411 tRNA synthetases class II (A) NT98_3863 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NT98_3864 PF00460 Flagella basal body rod protein NT98_3864 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NT98_3865 PF00448 SRP54-type protein, GTPase domain NT98_3866 PF00771 FHIPEP family NT98_3867 PF01312 FlhB HrpN YscU SpaS Family NT98_3869 PF01313 Bacterial export proteins, family 3 NT98_3870 PF00813 FliP family NT98_3872 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NT98_3872 PF04509 CheC-like family NT98_3873 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NT98_3873 PF02154 Flagellar motor switch protein FliM NT98_3875 PF01464 Transglycosylase SLT domain NT98_3876 PF00700 Bacterial flagellin C-terminal helical region NT98_3876 PF00669 Bacterial flagellin N-terminal helical region NT98_3877 PF00669 Bacterial flagellin N-terminal helical region NT98_3877 PF00700 Bacterial flagellin C-terminal helical region NT98_3878 PF00669 Bacterial flagellin N-terminal helical region NT98_3878 PF00700 Bacterial flagellin C-terminal helical region NT98_3879 PF00669 Bacterial flagellin N-terminal helical region NT98_3879 PF00700 Bacterial flagellin C-terminal helical region NT98_3880 PF00700 Bacterial flagellin C-terminal helical region NT98_3880 PF00669 Bacterial flagellin N-terminal helical region NT98_3881 PF12181 DNA binding domain of the motility gene repressor (MogR) NT98_3882 PF01584 CheW-like domain NT98_3882 PF00072 Response regulator receiver domain NT98_3885 PF00460 Flagella basal body rod protein NT98_3885 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NT98_3885 PF07559 Flagellar basal body protein FlaE NT98_3889 PF02874 ATP synthase alpha/beta family, beta-barrel domain NT98_3889 PF18269 T3SS EscN ATPase C-terminal domain NT98_3889 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NT98_3891 PF01706 FliG C-terminal domain NT98_3891 PF14841 FliG middle domain NT98_3891 PF14842 FliG N-terminal domain NT98_3892 PF08345 Flagellar M-ring protein C-terminal NT98_3892 PF01514 Secretory protein of YscJ/FliF family NT98_3893 PF02049 Flagellar hook-basal body complex protein FliE NT98_3894 PF00460 Flagella basal body rod protein NT98_3894 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NT98_3895 PF00460 Flagella basal body rod protein NT98_3898 PF07196 Flagellin hook IN motif NT98_3898 PF07195 Flagellar hook-associated protein 2 C-terminus NT98_3898 PF02465 Flagellar hook-associated protein 2 N-terminus NT98_39 PF03099 Biotin/lipoate A/B protein ligase family NT98_3900 PF00460 Flagella basal body rod protein NT98_3900 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NT98_3904 PF03705 CheR methyltransferase, all-alpha domain NT98_3904 PF01739 CheR methyltransferase, SAM binding domain NT98_3907 PF04509 CheC-like family NT98_3907 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NT98_3908 PF01584 CheW-like domain NT98_3908 PF07194 P2 response regulator binding domain NT98_3908 PF01627 Hpt domain NT98_3908 PF02895 Signal transducing histidine kinase, homodimeric domain NT98_3908 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_3909 PF00072 Response regulator receiver domain NT98_391 PF03960 ArsC family NT98_3910 PF00691 OmpA family NT98_3910 PF13677 Membrane MotB of proton-channel complex MotA/MotB NT98_3911 PF01618 MotA/TolQ/ExbB proton channel family NT98_3913 PF17209 Hfq protein NT98_3917 PF07690 Major Facilitator Superfamily NT98_392 PF01597 Glycine cleavage H-protein NT98_3922 PF00881 Nitroreductase family NT98_3924 PF02698 DUF218 domain NT98_3925 PF04239 Protein of unknown function (DUF421) NT98_3927 PF06445 GyrI-like small molecule binding domain NT98_3927 PF13411 MerR HTH family regulatory protein NT98_3928 PF00753 Metallo-beta-lactamase superfamily NT98_3928 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NT98_3928 PF17770 Ribonuclease J C-terminal domain NT98_3929 PF00999 Sodium/hydrogen exchanger family NT98_393 PF01751 Toprim domain NT98_3931 PF00202 Aminotransferase class-III NT98_3932 PF00474 Sodium:solute symporter family NT98_3933 PF04341 Protein of unknown function, DUF485 NT98_3936 PF01810 LysE type translocator NT98_3937 PF08892 YqcI/YcgG family NT98_3938 PF00313 'Cold-shock' DNA-binding domain NT98_394 PF00085 Thioredoxin NT98_3943 PF01263 Aldose 1-epimerase NT98_3944 PF13456 Reverse transcriptase-like NT98_3948 PF13673 Acetyltransferase (GNAT) domain NT98_3948 PF18014 Acetyltransferase (GNAT) domain NT98_3951 PF13439 Glycosyltransferase Family 4 NT98_3951 PF00534 Glycosyl transferases group 1 NT98_3952 PF00535 Glycosyl transferase family 2 NT98_3955 PF02397 Bacterial sugar transferase NT98_396 PF09383 NIL domain NT98_396 PF00005 ABC transporter NT98_3960 PF01367 5'-3' exonuclease, C-terminal SAM fold NT98_3960 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NT98_3961 PF00690 Cation transporter/ATPase, N-terminus NT98_3961 PF00689 Cation transporting ATPase, C-terminus NT98_3963 PF03738 Glutathionylspermidine synthase preATP-grasp NT98_3966 PF00581 Rhodanese-like domain NT98_3967 PF10752 Protein of unknown function (DUF2533) NT98_3968 PF00583 Acetyltransferase (GNAT) family NT98_397 PF00528 Binding-protein-dependent transport system inner membrane component NT98_3970 PF00350 Dynamin family NT98_3972 PF04235 Protein of unknown function (DUF418) NT98_3973 PF00860 Permease family NT98_3974 PF00156 Phosphoribosyl transferase domain NT98_3975 PF00557 Metallopeptidase family M24 NT98_3977 PF02074 Carboxypeptidase Taq (M32) metallopeptidase NT98_3978 PF13307 Helicase C-terminal domain NT98_398 PF03180 NLPA lipoprotein NT98_3980 PF01170 Putative RNA methylase family UPF0020 NT98_3980 PF02926 THUMP domain NT98_3981 PF05103 DivIVA protein NT98_3982 PF06908 YspA SLOG family NT98_3989 PF10720 Protein of unknown function (DUF2515) NT98_399 PF03180 NLPA lipoprotein NT98_3990 PF03838 Recombination protein U NT98_3991 PF00905 Penicillin binding protein transpeptidase domain NT98_3991 PF00912 Transglycosylase NT98_3993 PF00633 Helix-hairpin-helix motif NT98_3993 PF10576 Iron-sulfur binding domain of endonuclease III NT98_3993 PF00730 HhH-GPD superfamily base excision DNA repair protein NT98_3994 PF07261 Replication initiation and membrane attachment NT98_3995 PF00155 Aminotransferase class I and II NT98_3997 PF14084 Protein of unknown function (DUF4264) NT98_3998 PF00929 Exonuclease NT98_3998 PF04851 Type III restriction enzyme, res subunit NT98_3998 PF13307 Helicase C-terminal domain NT98_3999 PF02261 Aspartate decarboxylase NT98_400 PF00005 ABC transporter NT98_4000 PF02569 Pantoate-beta-alanine ligase NT98_4001 PF02548 Ketopantoate hydroxymethyltransferase NT98_4003 PF08279 HTH domain NT98_4003 PF03099 Biotin/lipoate A/B protein ligase family NT98_4003 PF02237 Biotin protein ligase C terminal domain NT98_4004 PF01743 Poly A polymerase head domain NT98_4004 PF13735 tRNA nucleotidyltransferase domain 2 putative NT98_4004 PF12627 Probable RNA and SrmB- binding site of polymerase A NT98_4005 PF13439 Glycosyltransferase Family 4 NT98_4005 PF00534 Glycosyl transferases group 1 NT98_4006 PF02585 GlcNAc-PI de-N-acetylase NT98_4007 PF02142 MGS-like domain NT98_4008 PF01113 Dihydrodipicolinate reductase, N-terminus NT98_4008 PF05173 Dihydrodipicolinate reductase, C-terminus NT98_4009 PF03819 MazG nucleotide pyrophosphohydrolase domain NT98_401 PF01458 Uncharacterized protein family (UPF0051) NT98_4010 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) NT98_4010 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 NT98_4012 PF04298 Putative neutral zinc metallopeptidase NT98_4013 PF09577 Sporulation protein YpjB (SpoYpjB) NT98_4015 PF07187 Protein of unknown function (DUF1405) NT98_4016 PF00032 Cytochrome b(C-terminal)/b6/petD NT98_4016 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NT98_4017 PF00033 Cytochrome b/b6/petB NT98_4018 PF00355 Rieske [2Fe-2S] domain NT98_4019 PF10673 Protein of unknown function (DUF2487) NT98_402 PF00266 Aminotransferase class-V NT98_4020 PF08864 UPF0302 domain NT98_4020 PF08858 IDEAL domain NT98_4022 PF00155 Aminotransferase class I and II NT98_4023 PF01761 3-dehydroquinate synthase NT98_4024 PF01264 Chorismate synthase NT98_4025 PF00334 Nucleoside diphosphate kinase NT98_4026 PF00348 Polyprenyl synthetase NT98_4027 PF01209 ubiE/COQ5 methyltransferase family NT98_4028 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 NT98_4029 PF01227 GTP cyclohydrolase I NT98_403 PF01592 NifU-like N terminal domain NT98_4030 PF00216 Bacterial DNA-binding protein NT98_4031 PF09547 Stage IV sporulation protein A (spore_IV_A) NT98_4033 PF10966 Protein of unknown function (DUF2768) NT98_4035 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NT98_4035 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NT98_4036 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NT98_4036 PF01926 50S ribosome-binding GTPase NT98_4038 PF14045 YIEGIA protein NT98_404 PF01458 Uncharacterized protein family (UPF0051) NT98_4040 PF14140 YpzI-like protein NT98_4041 PF01070 FMN-dependent dehydrogenase NT98_4042 PF00575 S1 RNA binding domain NT98_4043 PF02224 Cytidylate kinase NT98_4045 PF17763 Glutaminase/Asparaginase C-terminal domain NT98_4045 PF00710 Asparaginase, N-terminal NT98_405 PF04892 VanZ like family NT98_4050 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NT98_4050 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NT98_4051 PF05389 Negative regulator of genetic competence (MecA) NT98_4052 PF02607 B12 binding domain NT98_4052 PF13411 MerR HTH family regulatory protein NT98_4052 PF02310 B12 binding domain NT98_4053 PF00149 Calcineurin-like phosphoesterase NT98_4055 PF02517 CPBP intramembrane metalloprotease NT98_4056 PF00270 DEAD/DEAH box helicase NT98_4056 PF00271 Helicase conserved C-terminal domain NT98_4059 PF12822 ECF transporter, substrate-specific component NT98_406 PF03551 Transcriptional regulator PadR-like family NT98_4061 PF01551 Peptidase family M23 NT98_4062 PF01923 Cobalamin adenosyltransferase NT98_4063 PF00672 HAMP domain NT98_4063 PF00989 PAS fold NT98_4063 PF18698 Histidine kinase sensor domain NT98_4063 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_4063 PF00512 His Kinase A (phospho-acceptor) domain NT98_4064 PF00486 Transcriptional regulatory protein, C terminal NT98_4064 PF00072 Response regulator receiver domain NT98_4065 PF01578 Cytochrome C assembly protein NT98_4066 PF05140 ResB-like family NT98_4067 PF00578 AhpC/TSA family NT98_4068 PF01479 S4 domain NT98_4068 PF00849 RNA pseudouridylate synthase NT98_4069 PF07670 Nucleoside recognition NT98_4070 PF07670 Nucleoside recognition NT98_4071 PF00768 D-alanyl-D-alanine carboxypeptidase NT98_4071 PF07943 Penicillin-binding protein 5, C-terminal domain NT98_4072 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NT98_4072 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NT98_4075 PF09924 Uncharacterised conserved protein (DUF2156) NT98_4075 PF03706 Lysylphosphatidylglycerol synthase TM region NT98_4078 PF01048 Phosphorylase superfamily NT98_4079 PF00989 PAS fold NT98_4079 PF16736 Single Cache-like NT98_4079 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_4079 PF00512 His Kinase A (phospho-acceptor) domain NT98_408 PF02872 5'-nucleotidase, C-terminal domain NT98_4080 PF00589 Phage integrase family NT98_4082 PF01904 Protein of unknown function DUF72 NT98_4083 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_4083 PF00512 His Kinase A (phospho-acceptor) domain NT98_4083 PF00989 PAS fold NT98_4086 PF00912 Transglycosylase NT98_4086 PF00905 Penicillin binding protein transpeptidase domain NT98_4087 PF01865 Protein of unknown function DUF47 NT98_4088 PF01384 Phosphate transporter family NT98_4089 PF01925 Sulfite exporter TauE/SafE NT98_409 PF08827 Domain of unknown function (DUF1805) NT98_4092 PF00970 Oxidoreductase FAD-binding domain NT98_4092 PF00042 Globin NT98_4092 PF00175 Oxidoreductase NAD-binding domain NT98_4097 PF01209 ubiE/COQ5 methyltransferase family NT98_4099 PF05525 Branched-chain amino acid transport protein NT98_41 PF07293 Protein of unknown function (DUF1450) NT98_410 PF09560 Sporulation protein YunB (Spo_YunB) NT98_4101 PF00072 Response regulator receiver domain NT98_4101 PF00196 Bacterial regulatory proteins, luxR family NT98_4102 PF07730 Histidine kinase NT98_4102 PF00672 HAMP domain NT98_4102 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_4103 PF09922 Cell wall-active antibiotics response 4TMS YvqF NT98_4106 PF03553 Na+/H+ antiporter family NT98_4108 PF00375 Sodium:dicarboxylate symporter family NT98_411 PF01551 Peptidase family M23 NT98_4110 PF00209 Sodium:neurotransmitter symporter family NT98_4112 PF01903 CbiX NT98_4113 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NT98_4115 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NT98_4115 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NT98_4117 PF14306 PUA-like domain NT98_4117 PF01747 ATP-sulfurylase NT98_4118 PF01507 Phosphoadenosine phosphosulfate reductase family NT98_4119 PF01507 Phosphoadenosine phosphosulfate reductase family NT98_412 PF04055 Radical SAM superfamily NT98_412 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family NT98_4121 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NT98_4121 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NT98_4123 PF00884 Sulfatase NT98_4124 PF01066 CDP-alcohol phosphatidyltransferase NT98_4125 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NT98_4125 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NT98_4127 PF02811 PHP domain NT98_4128 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase NT98_4129 PF01502 Phosphoribosyl-AMP cyclohydrolase NT98_4130 PF00977 Histidine biosynthesis protein NT98_4131 PF00977 Histidine biosynthesis protein NT98_4132 PF00117 Glutamine amidotransferase class-I NT98_4133 PF00475 Imidazoleglycerol-phosphate dehydratase NT98_4134 PF00815 Histidinol dehydrogenase NT98_4135 PF01634 ATP phosphoribosyltransferase NT98_4136 PF13393 Histidyl-tRNA synthetase NT98_4137 PF00694 Aconitase C-terminal domain NT98_4138 PF00330 Aconitase family (aconitate hydratase) NT98_4139 PF00180 Isocitrate/isopropylmalate dehydrogenase NT98_4140 PF08502 LeuA allosteric (dimerisation) domain NT98_4140 PF00682 HMGL-like NT98_4141 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NT98_4141 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NT98_4142 PF01842 ACT domain NT98_4142 PF10369 Small subunit of acetolactate synthase NT98_4143 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NT98_4143 PF00205 Thiamine pyrophosphate enzyme, central domain NT98_4143 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NT98_4144 PF01063 Amino-transferase class IV NT98_4146 PF03698 Uncharacterised protein family (UPF0180) NT98_4148 PF09579 Sporulation protein YtfJ (Spore_YtfJ) NT98_4150 PF02386 Cation transport protein NT98_4152 PF00375 Sodium:dicarboxylate symporter family NT98_4153 PF01047 MarR family NT98_4156 PF02673 Bacitracin resistance protein BacA NT98_4157 PF01554 MatE NT98_416 PF10086 YhfC intramembrane metalloprotease NT98_4161 PF01636 Phosphotransferase enzyme family NT98_4164 PF00258 Flavodoxin NT98_4166 PF07687 Peptidase dimerisation domain NT98_4166 PF01546 Peptidase family M20/M25/M40 NT98_4168 PF13193 AMP-binding enzyme C-terminal domain NT98_4168 PF00501 AMP-binding enzyme NT98_4169 PF03062 MBOAT, membrane-bound O-acyltransferase family NT98_417 PF13411 MerR HTH family regulatory protein NT98_417 PF07739 TipAS antibiotic-recognition domain NT98_4170 PF00550 Phosphopantetheine attachment site NT98_4171 PF04914 DltD protein NT98_4172 PF03060 Nitronate monooxygenase NT98_4173 PF17676 LD-carboxypeptidase C-terminal domain NT98_4173 PF02016 LD-carboxypeptidase N-terminal domain NT98_4175 PF00857 Isochorismatase family NT98_4177 PF01037 Lrp/AsnC ligand binding domain NT98_4179 PF02517 CPBP intramembrane metalloprotease NT98_418 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) NT98_4181 PF00005 ABC transporter NT98_4183 PF00005 ABC transporter NT98_4184 PF00392 Bacterial regulatory proteins, gntR family NT98_4185 PF00268 Ribonucleotide reductase, small chain NT98_4186 PF08343 Ribonucleotide reductase N-terminal NT98_4186 PF02867 Ribonucleotide reductase, barrel domain NT98_4186 PF00317 Ribonucleotide reductase, all-alpha domain NT98_4187 PF02867 Ribonucleotide reductase, barrel domain NT98_4187 PF00317 Ribonucleotide reductase, all-alpha domain NT98_4187 PF08343 Ribonucleotide reductase N-terminal NT98_4188 PF07972 NrdI Flavodoxin like NT98_419 PF06265 Protein of unknown function (DUF1027) NT98_4194 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) NT98_4195 PF14489 QueF-like protein NT98_4196 PF04055 Radical SAM superfamily NT98_4197 PF01242 6-pyruvoyl tetrahydropterin synthase NT98_4198 PF06508 Queuosine biosynthesis protein QueC NT98_4199 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_4199 PF00512 His Kinase A (phospho-acceptor) domain NT98_4199 PF00989 PAS fold NT98_4199 PF13188 PAS domain NT98_4199 PF13426 PAS domain NT98_42 PF01032 FecCD transport family NT98_4201 PF12867 DinB superfamily NT98_4203 PF01047 MarR family NT98_4204 PF00512 His Kinase A (phospho-acceptor) domain NT98_4204 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_4204 PF02743 Cache domain NT98_4205 PF09388 Spo0E like sporulation regulatory protein NT98_4206 PF04748 Divergent polysaccharide deacetylase NT98_4208 PF00596 Class II Aldolase and Adducin N-terminal domain NT98_4209 PF00395 S-layer homology domain NT98_4209 PF01520 N-acetylmuramoyl-L-alanine amidase NT98_4211 PF00455 DeoR C terminal sensor domain NT98_4211 PF08220 DeoR-like helix-turn-helix domain NT98_4213 PF00266 Aminotransferase class-V NT98_4214 PF13419 Haloacid dehalogenase-like hydrolase NT98_4215 PF00528 Binding-protein-dependent transport system inner membrane component NT98_4216 PF00005 ABC transporter NT98_4216 PF08402 TOBE domain NT98_422 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded NT98_4220 PF02386 Cation transport protein NT98_4222 PF00561 alpha/beta hydrolase fold NT98_4227 PF01575 MaoC like domain NT98_4228 PF00269 Small, acid-soluble spore proteins, alpha/beta type NT98_4229 PF02386 Cation transport protein NT98_423 PF01934 Protein of unknown function DUF86 NT98_4230 PF03741 Integral membrane protein TerC family NT98_4231 PF01226 Formate/nitrite transporter NT98_4233 PF01478 Type IV leader peptidase family NT98_4233 PF06750 Bacterial Peptidase A24 N-terminal domain NT98_4234 PF02589 LUD domain NT98_4235 PF13183 4Fe-4S dicluster domain NT98_4235 PF02589 LUD domain NT98_4235 PF11870 Domain of unknown function (DUF3390) NT98_4236 PF02754 Cysteine-rich domain NT98_4237 PF00392 Bacterial regulatory proteins, gntR family NT98_4237 PF07729 FCD domain NT98_4238 PF00512 His Kinase A (phospho-acceptor) domain NT98_4238 PF00672 HAMP domain NT98_4238 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_4238 PF18698 Histidine kinase sensor domain NT98_4238 PF00989 PAS fold NT98_4239 PF00072 Response regulator receiver domain NT98_4239 PF00486 Transcriptional regulatory protein, C terminal NT98_4241 PF13556 PucR C-terminal helix-turn-helix domain NT98_4241 PF17853 GGDEF-like domain NT98_4241 PF05651 Putative sugar diacid recognition NT98_4242 PF02913 FAD linked oxidases, C-terminal domain NT98_4242 PF01565 FAD binding domain NT98_4243 PF13183 4Fe-4S dicluster domain NT98_4243 PF02754 Cysteine-rich domain NT98_4244 PF00188 Cysteine-rich secretory protein family NT98_4246 PF00849 RNA pseudouridylate synthase NT98_4246 PF01479 S4 domain NT98_4248 PF03176 MMPL family NT98_4249 PF01569 PAP2 superfamily NT98_425 PF13344 Haloacid dehalogenase-like hydrolase NT98_4250 PF13416 Bacterial extracellular solute-binding protein NT98_4252 PF00528 Binding-protein-dependent transport system inner membrane component NT98_4253 PF00528 Binding-protein-dependent transport system inner membrane component NT98_4254 PF00005 ABC transporter NT98_4254 PF08402 TOBE domain NT98_4255 PF00171 Aldehyde dehydrogenase family NT98_4257 PF05547 Immune inhibitor A peptidase M6 NT98_4259 PF01381 Helix-turn-helix NT98_4259 PF08671 Anti-repressor SinI NT98_4260 PF12389 Camelysin metallo-endopeptidase NT98_4262 PF12389 Camelysin metallo-endopeptidase NT98_4264 PF00768 D-alanyl-D-alanine carboxypeptidase NT98_4264 PF07943 Penicillin-binding protein 5, C-terminal domain NT98_4268 PF02899 Phage integrase, N-terminal SAM-like domain NT98_4268 PF00589 Phage integrase family NT98_427 PF02525 Flavodoxin-like fold NT98_4274 PF00239 Resolvase, N terminal domain NT98_4274 PF02796 Helix-turn-helix domain of resolvase NT98_4288 PF01381 Helix-turn-helix NT98_4289 PF00676 Dehydrogenase E1 component NT98_4289 PF16870 2-oxoglutarate dehydrogenase C-terminal NT98_4289 PF02779 Transketolase, pyrimidine binding domain NT98_429 PF11202 Phosphoribosyl transferase (PRTase) NT98_429 PF15608 PELOTA RNA binding domain NT98_4290 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NT98_4290 PF02817 e3 binding domain NT98_4290 PF00364 Biotin-requiring enzyme NT98_4297 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NT98_4297 PF07992 Pyridine nucleotide-disulphide oxidoreductase NT98_4299 PF13240 zinc-ribbon domain NT98_43 PF01032 FecCD transport family NT98_4302 PF10042 Uncharacterized conserved protein (DUF2278) NT98_4303 PF02652 L-lactate permease NT98_4305 PF00290 Tryptophan synthase alpha chain NT98_4306 PF00291 Pyridoxal-phosphate dependent enzyme NT98_4307 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase NT98_4308 PF00218 Indole-3-glycerol phosphate synthase NT98_4309 PF00591 Glycosyl transferase family, a/b domain NT98_4309 PF02885 Glycosyl transferase family, helical bundle domain NT98_4310 PF00117 Glutamine amidotransferase class-I NT98_4310 PF00591 Glycosyl transferase family, a/b domain NT98_4310 PF02885 Glycosyl transferase family, helical bundle domain NT98_4312 PF00474 Sodium:solute symporter family NT98_4313 PF02368 Bacterial Ig-like domain (group 2) NT98_4317 PF00756 Putative esterase NT98_4319 PF13673 Acetyltransferase (GNAT) domain NT98_4320 PF00580 UvrD/REP helicase N-terminal domain NT98_4320 PF13361 UvrD-like helicase C-terminal domain NT98_4323 PF07098 Protein of unknown function (DUF1360) NT98_4327 PF04321 RmlD substrate binding domain NT98_4328 PF16363 GDP-mannose 4,6 dehydratase NT98_4329 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase NT98_433 PF04608 Phosphatidylglycerophosphatase A NT98_4330 PF00483 Nucleotidyl transferase NT98_4334 PF00535 Glycosyl transferase family 2 NT98_4334 PF13181 Tetratricopeptide repeat NT98_4336 PF05711 Macrocin-O-methyltransferase (TylF) NT98_4337 PF08241 Methyltransferase domain NT98_4338 PF00535 Glycosyl transferase family 2 NT98_4339 PF01098 Cell cycle protein NT98_4340 PF00149 Calcineurin-like phosphoesterase NT98_4342 PF00849 RNA pseudouridylate synthase NT98_4343 PF01513 ATP-NAD kinase NT98_4344 PF04607 Region found in RelA / SpoT proteins NT98_4346 PF01928 CYTH domain NT98_4347 PF01152 Bacterial-like globin NT98_4350 PF01432 Peptidase family M3 NT98_4350 PF08439 Oligopeptidase F NT98_4352 PF13396 Phospholipase_D-nuclease N-terminal NT98_4352 PF13091 PLD-like domain NT98_4353 PF05389 Negative regulator of genetic competence (MecA) NT98_4354 PF03741 Integral membrane protein TerC family NT98_4355 PF03960 ArsC family NT98_4357 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NT98_4358 PF01554 MatE NT98_4359 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NT98_4359 PF00005 ABC transporter NT98_436 PF01106 NifU-like domain NT98_4360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NT98_4360 PF00005 ABC transporter NT98_4361 PF12911 N-terminal TM domain of oligopeptide transport permease C NT98_4361 PF00528 Binding-protein-dependent transport system inner membrane component NT98_4362 PF00528 Binding-protein-dependent transport system inner membrane component NT98_4363 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NT98_4365 PF00579 tRNA synthetases class I (W and Y) NT98_4366 PF12227 Protein of unknown function (DUF3603) NT98_4367 PF10026 Predicted Zn-dependent protease (DUF2268) NT98_4368 PF00109 Beta-ketoacyl synthase, N-terminal domain NT98_4368 PF02801 Beta-ketoacyl synthase, C-terminal domain NT98_4369 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NT98_4369 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NT98_437 PF07315 Protein of unknown function (DUF1462) NT98_4370 PF10815 ComZ NT98_4375 PF00004 ATPase family associated with various cellular activities (AAA) NT98_4375 PF02861 Clp amino terminal domain, pathogenicity island component NT98_4375 PF10431 C-terminal, D2-small domain, of ClpB protein NT98_4375 PF07724 AAA domain (Cdc48 subfamily) NT98_4375 PF17871 AAA lid domain NT98_4376 PF14168 YjzC-like protein NT98_4379 PF12758 Protein of unknown function (DUF3813) NT98_4380 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) NT98_4380 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 NT98_4382 PF00639 PPIC-type PPIASE domain NT98_4385 PF05593 RHS Repeat NT98_4388 PF05593 RHS Repeat NT98_4389 PF13509 S1 domain NT98_4389 PF17783 CvfB-like winged helix domain NT98_4390 PF04461 Protein of unknown function (DUF520) NT98_4393 PF00128 Alpha amylase, catalytic domain NT98_4394 PF00909 Ammonium Transporter Family NT98_4395 PF00199 Catalase NT98_4395 PF06628 Catalase-related immune-responsive NT98_4397 PF00733 Asparagine synthase NT98_4397 PF13537 Glutamine amidotransferase domain NT98_4399 PF07457 Protein of unknown function (DUF1516) NT98_44 PF00005 ABC transporter NT98_4400 PF00202 Aminotransferase class-III NT98_4402 PF01557 Fumarylacetoacetate (FAA) hydrolase family NT98_4403 PF09388 Spo0E like sporulation regulatory protein NT98_4404 PF10676 Spore germination protein gerPA/gerPF NT98_4405 PF10803 Spore germination GerPB NT98_4406 PF10737 Spore germination protein GerPC NT98_4408 PF10970 Spore germination protein GerPE NT98_4409 PF10676 Spore germination protein gerPA/gerPF NT98_441 PF03831 PhnA domain NT98_441 PF08274 PhnA Zinc-Ribbon NT98_4411 PF13361 UvrD-like helicase C-terminal domain NT98_4411 PF00580 UvrD/REP helicase N-terminal domain NT98_4411 PF12705 PD-(D/E)XK nuclease superfamily NT98_4412 PF12705 PD-(D/E)XK nuclease superfamily NT98_4412 PF13361 UvrD-like helicase C-terminal domain NT98_4413 PF10502 Signal peptidase, peptidase S26 NT98_4414 PF09335 SNARE associated Golgi protein NT98_4416 PF06338 ComK protein NT98_4419 PF00313 'Cold-shock' DNA-binding domain NT98_442 PF03649 Uncharacterised protein family (UPF0014) NT98_4421 PF00463 Isocitrate lyase family NT98_4422 PF01274 Malate synthase NT98_4423 PF00395 S-layer homology domain NT98_4425 PF00395 S-layer homology domain NT98_4425 PF03424 Carbohydrate binding domain (family 17/28) NT98_4425 PF00150 Cellulase (glycosyl hydrolase family 5) NT98_4426 PF00892 EamA-like transporter family NT98_4427 PF01435 Peptidase family M48 NT98_4427 PF16491 CAAX prenyl protease N-terminal, five membrane helices NT98_443 PF09383 NIL domain NT98_443 PF00005 ABC transporter NT98_4432 PF00072 Response regulator receiver domain NT98_4432 PF00486 Transcriptional regulatory protein, C terminal NT98_4433 PF00512 His Kinase A (phospho-acceptor) domain NT98_4433 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_4436 PF12833 Helix-turn-helix domain NT98_4436 PF06445 GyrI-like small molecule binding domain NT98_4437 PF08281 Sigma-70, region 4 NT98_4437 PF04542 Sigma-70 region 2 NT98_4439 PF01966 HD domain NT98_444 PF07992 Pyridine nucleotide-disulphide oxidoreductase NT98_4440 PF00149 Calcineurin-like phosphoesterase NT98_4441 PF12146 Serine aminopeptidase, S33 NT98_4443 PF07968 Leukocidin/Hemolysin toxin family NT98_4445 PF13193 AMP-binding enzyme C-terminal domain NT98_4445 PF00501 AMP-binding enzyme NT98_4447 PF10437 Bacterial lipoate protein ligase C-terminus NT98_4447 PF03099 Biotin/lipoate A/B protein ligase family NT98_4448 PF12706 Beta-lactamase superfamily domain NT98_4449 PF14149 YhfH-like protein NT98_445 PF07293 Protein of unknown function (DUF1450) NT98_4450 PF00356 Bacterial regulatory proteins, lacI family NT98_4451 PF13302 Acetyltransferase (GNAT) domain NT98_4455 PF00440 Bacterial regulatory proteins, tetR family NT98_4455 PF17932 Tetracyclin repressor-like, C-terminal domain NT98_446 PF01678 Diaminopimelate epimerase NT98_4462 PF01208 Uroporphyrinogen decarboxylase (URO-D) NT98_4463 PF00912 Transglycosylase NT98_4463 PF00905 Penicillin binding protein transpeptidase domain NT98_4464 PF03992 Antibiotic biosynthesis monooxygenase NT98_4465 PF03703 Bacterial PH domain NT98_4466 PF03703 Bacterial PH domain NT98_4469 PF03703 Bacterial PH domain NT98_447 PF01521 Iron-sulphur cluster biosynthesis NT98_4470 PF03703 Bacterial PH domain NT98_4472 PF17934 Tetracyclin repressor-like, C-terminal domain NT98_4472 PF00440 Bacterial regulatory proteins, tetR family NT98_4474 PF12787 EcsC protein family NT98_4475 PF05975 Bacterial ABC transporter protein EcsB NT98_4476 PF00005 ABC transporter NT98_4477 PF01230 HIT domain NT98_4478 PF12732 YtxH-like protein NT98_4479 PF01047 MarR family NT98_4483 PF13538 UvrD-like helicase C-terminal domain NT98_4484 PF13538 UvrD-like helicase C-terminal domain NT98_4488 PF04542 Sigma-70 region 2 NT98_4488 PF08281 Sigma-70, region 4 NT98_4490 PF01266 FAD dependent oxidoreductase NT98_4490 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NT98_4491 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NT98_4491 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NT98_4492 PF00230 Major intrinsic protein NT98_4493 PF04309 Glycerol-3-phosphate responsive antiterminator NT98_4496 PF00561 alpha/beta hydrolase fold NT98_4496 PF08386 TAP-like protein NT98_4498 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NT98_4499 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NT98_45 PF01497 Periplasmic binding protein NT98_4500 PF00144 Beta-lactamase NT98_4501 PF01336 OB-fold nucleic acid binding domain NT98_4501 PF01966 HD domain NT98_4502 PF13514 AAA domain NT98_4503 PF00149 Calcineurin-like phosphoesterase NT98_4506 PF11121 Protein of unknown function (DUF2639) NT98_4509 PF08240 Alcohol dehydrogenase GroES-like domain NT98_4509 PF00107 Zinc-binding dehydrogenase NT98_451 PF04463 Protein of unknown function (DUF523) NT98_4513 PF01906 Putative heavy-metal-binding NT98_4518 PF00072 Response regulator receiver domain NT98_4518 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NT98_4518 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_4518 PF00672 HAMP domain NT98_4518 PF01627 Hpt domain NT98_4518 PF00512 His Kinase A (phospho-acceptor) domain NT98_4519 PF01739 CheR methyltransferase, SAM binding domain NT98_4519 PF03705 CheR methyltransferase, all-alpha domain NT98_4520 PF13426 PAS domain NT98_4520 PF07228 Stage II sporulation protein E (SpoIIE) NT98_4522 PF04545 Sigma-70, region 4 NT98_4522 PF04542 Sigma-70 region 2 NT98_4522 PF04539 Sigma-70 region 3 NT98_4523 PF13581 Histidine kinase-like ATPase domain NT98_4524 PF01740 STAS domain NT98_4526 PF04226 Transglycosylase associated protein NT98_4528 PF11181 Heat induced stress protein YflT NT98_4531 PF12697 Alpha/beta hydrolase family NT98_4534 PF00150 Cellulase (glycosyl hydrolase family 5) NT98_4534 PF03424 Carbohydrate binding domain (family 17/28) NT98_4534 PF00395 S-layer homology domain NT98_4538 PF02368 Bacterial Ig-like domain (group 2) NT98_4538 PF00395 S-layer homology domain NT98_454 PF06445 GyrI-like small molecule binding domain NT98_4540 PF00672 HAMP domain NT98_4540 PF01966 HD domain NT98_4543 PF18801 response regulator aspartate phosphatase H, N terminal NT98_4545 PF02733 Dak1 domain NT98_4547 PF02733 Dak1 domain NT98_455 PF07992 Pyridine nucleotide-disulphide oxidoreductase NT98_4551 PF01066 CDP-alcohol phosphatidyltransferase NT98_456 PF07992 Pyridine nucleotide-disulphide oxidoreductase NT98_4562 PF07690 Major Facilitator Superfamily NT98_4565 PF03606 C4-dicarboxylate anaerobic carrier NT98_4566 PF07722 Peptidase C26 NT98_4567 PF13426 PAS domain NT98_4567 PF00158 Sigma-54 interaction domain NT98_4567 PF02954 Bacterial regulatory protein, Fis family NT98_4569 PF01925 Sulfite exporter TauE/SafE NT98_457 PF00293 NUDIX domain NT98_457 PF13344 Haloacid dehalogenase-like hydrolase NT98_4571 PF03796 DnaB-like helicase C terminal domain NT98_4571 PF00772 DnaB-like helicase N terminal domain NT98_4574 PF00772 DnaB-like helicase N terminal domain NT98_4574 PF03796 DnaB-like helicase C terminal domain NT98_459 PF06725 3D domain NT98_4591 PF02342 TerD domain NT98_4592 PF03401 Tripartite tricarboxylate transporter family receptor NT98_4593 PF08279 HTH domain NT98_4593 PF12431 Transcriptional regulator NT98_4593 PF00072 Response regulator receiver domain NT98_4594 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NT98_4594 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_4595 PF00083 Sugar (and other) transporter NT98_46 PF01966 HD domain NT98_460 PF00883 Cytosol aminopeptidase family, catalytic domain NT98_460 PF02789 Cytosol aminopeptidase family, N-terminal domain NT98_4600 PF08924 Domain of unknown function (DUF1906) NT98_4600 PF01471 Putative peptidoglycan binding domain NT98_4601 PF01381 Helix-turn-helix NT98_4605 PF01510 N-acetylmuramoyl-L-alanine amidase NT98_4609 PF01471 Putative peptidoglycan binding domain NT98_4609 PF08924 Domain of unknown function (DUF1906) NT98_461 PF10372 Bacterial membrane-spanning protein N-terminus NT98_461 PF02457 DisA bacterial checkpoint controller nucleotide-binding NT98_4616 PF00772 DnaB-like helicase N terminal domain NT98_4616 PF03796 DnaB-like helicase C terminal domain NT98_462 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NT98_462 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NT98_462 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NT98_462 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NT98_4622 PF02423 Ornithine cyclodeaminase/mu-crystallin family NT98_4623 PF05544 Proline racemase NT98_4624 PF11121 Protein of unknown function (DUF2639) NT98_4626 PF00395 S-layer homology domain NT98_4626 PF01520 N-acetylmuramoyl-L-alanine amidase NT98_4627 PF05343 M42 glutamyl aminopeptidase NT98_463 PF00483 Nucleotidyl transferase NT98_4631 PF00378 Enoyl-CoA hydratase/isomerase NT98_4633 PF03062 MBOAT, membrane-bound O-acyltransferase family NT98_4635 PF00395 S-layer homology domain NT98_4636 PF02368 Bacterial Ig-like domain (group 2) NT98_4636 PF13205 Bacterial Ig-like domain NT98_4636 PF00395 S-layer homology domain NT98_4638 PF14667 Polysaccharide biosynthesis C-terminal domain NT98_4638 PF01943 Polysaccharide biosynthesis protein NT98_4639 PF07516 SecA Wing and Scaffold domain NT98_4639 PF01043 SecA preprotein cross-linking domain NT98_4639 PF07517 SecA DEAD-like domain NT98_4644 PF00916 Sulfate permease family NT98_4644 PF01740 STAS domain NT98_4646 PF06445 GyrI-like small molecule binding domain NT98_4646 PF13411 MerR HTH family regulatory protein NT98_4648 PF09335 SNARE associated Golgi protein NT98_4649 PF05738 Cna protein B-type domain NT98_4649 PF05737 Collagen binding domain NT98_4649 PF17802 Prealbumin-like fold domain NT98_465 PF02632 BioY family NT98_4650 PF00501 AMP-binding enzyme NT98_4650 PF13193 AMP-binding enzyme C-terminal domain NT98_4651 PF04055 Radical SAM superfamily NT98_4652 PF01510 N-acetylmuramoyl-L-alanine amidase NT98_4652 PF01471 Putative peptidoglycan binding domain NT98_4655 PF02245 Methylpurine-DNA glycosylase (MPG) NT98_4657 PF03306 Alpha-acetolactate decarboxylase NT98_4658 PF00205 Thiamine pyrophosphate enzyme, central domain NT98_4658 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NT98_4658 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NT98_4660 PF01048 Phosphorylase superfamily NT98_4663 PF06133 Control of competence regulator ComK, YlbF/YmcA NT98_4664 PF04286 Protein of unknown function (DUF445) NT98_4666 PF14398 YheC/D like ATP-grasp NT98_4668 PF00269 Small, acid-soluble spore proteins, alpha/beta type NT98_4669 PF00005 ABC transporter NT98_467 PF03061 Thioesterase superfamily NT98_4670 PF00528 Binding-protein-dependent transport system inner membrane component NT98_4671 PF00497 Bacterial extracellular solute-binding proteins, family 3 NT98_4672 PF00664 ABC transporter transmembrane region NT98_4672 PF00005 ABC transporter NT98_4673 PF00005 ABC transporter NT98_4673 PF00664 ABC transporter transmembrane region NT98_4674 PF00171 Aldehyde dehydrogenase family NT98_4676 PF01177 Asp/Glu/Hydantoin racemase NT98_4677 PF13520 Amino acid permease NT98_4679 PF01965 DJ-1/PfpI family NT98_468 PF03129 Anticodon binding domain NT98_468 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NT98_4682 PF02525 Flavodoxin-like fold NT98_4684 PF01638 HxlR-like helix-turn-helix NT98_4686 PF02687 FtsX-like permease family NT98_4687 PF00005 ABC transporter NT98_4688 PF12704 MacB-like periplasmic core domain NT98_4688 PF02687 FtsX-like permease family NT98_4689 PF00005 ABC transporter NT98_4691 PF00512 His Kinase A (phospho-acceptor) domain NT98_4691 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_4692 PF00486 Transcriptional regulatory protein, C terminal NT98_4692 PF00072 Response regulator receiver domain NT98_4694 PF07690 Major Facilitator Superfamily NT98_4695 PF00440 Bacterial regulatory proteins, tetR family NT98_4695 PF17934 Tetracyclin repressor-like, C-terminal domain NT98_4696 PF00893 Small Multidrug Resistance protein NT98_4697 PF00893 Small Multidrug Resistance protein NT98_4698 PF13411 MerR HTH family regulatory protein NT98_4699 PF00561 alpha/beta hydrolase fold NT98_4699 PF00106 short chain dehydrogenase NT98_47 PF01361 Tautomerase enzyme NT98_4701 PF01037 Lrp/AsnC ligand binding domain NT98_4702 PF00892 EamA-like transporter family NT98_4705 PF07681 DoxX NT98_4707 PF00367 phosphotransferase system, EIIB NT98_4707 PF02378 Phosphotransferase system, EIIC NT98_4708 PF13580 SIS domain NT98_4709 PF01380 SIS domain NT98_4709 PF01418 Helix-turn-helix domain, rpiR family NT98_471 PF03600 Citrate transporter NT98_4711 PF00999 Sodium/hydrogen exchanger family NT98_4712 PF13520 Amino acid permease NT98_4719 PF09335 SNARE associated Golgi protein NT98_472 PF00929 Exonuclease NT98_4721 PF02735 Ku70/Ku80 beta-barrel domain NT98_4724 PF11007 Spore coat associated protein JA (CotJA) NT98_4725 PF12652 CotJB protein NT98_4726 PF05067 Manganese containing catalase NT98_4727 PF05525 Branched-chain amino acid transport protein NT98_473 PF08810 Kinase associated protein B NT98_4731 PF09529 Integral membrane protein (intg_mem_TP0381) NT98_4733 PF00005 ABC transporter NT98_4734 PF02687 FtsX-like permease family NT98_4734 PF12704 MacB-like periplasmic core domain NT98_4735 PF06725 3D domain NT98_4735 PF01476 LysM domain NT98_4738 PF02378 Phosphotransferase system, EIIC NT98_4739 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NT98_4740 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit NT98_4741 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NT98_4741 PF05043 Mga helix-turn-helix domain NT98_4741 PF00874 PRD domain NT98_4741 PF08279 HTH domain NT98_4743 PF07690 Major Facilitator Superfamily NT98_4744 PF02690 Na+/Pi-cotransporter NT98_4745 PF00107 Zinc-binding dehydrogenase NT98_4745 PF08240 Alcohol dehydrogenase GroES-like domain NT98_4746 PF03816 Cell envelope-related transcriptional attenuator domain NT98_4748 PF01925 Sulfite exporter TauE/SafE NT98_4749 PF13686 DsrE/DsrF/DrsH-like family NT98_4751 PF00581 Rhodanese-like domain NT98_4751 PF01206 Sulfurtransferase TusA NT98_4753 PF01206 Sulfurtransferase TusA NT98_4754 PF01206 Sulfurtransferase TusA NT98_4755 PF00753 Metallo-beta-lactamase superfamily NT98_4755 PF00581 Rhodanese-like domain NT98_4756 PF01206 Sulfurtransferase TusA NT98_4756 PF00581 Rhodanese-like domain NT98_4757 PF02583 Metal-sensitive transcriptional repressor NT98_4758 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NT98_4758 PF07992 Pyridine nucleotide-disulphide oxidoreductase NT98_476 PF00155 Aminotransferase class I and II NT98_4760 PF00089 Trypsin NT98_4762 PF04293 SpoVR like protein NT98_4763 PF00881 Nitroreductase family NT98_4765 PF03323 Bacillus/Clostridium GerA spore germination protein NT98_4767 PF03845 Spore germination protein NT98_4769 PF14148 YhdB-like protein NT98_4770 PF02600 Disulfide bond formation protein DsbB NT98_4771 PF00085 Thioredoxin NT98_4774 PF17969 L,D-transpeptidase C-terminal domain NT98_4774 PF03734 L,D-transpeptidase catalytic domain NT98_4776 PF00860 Permease family NT98_4778 PF13276 HTH-like domain NT98_4778 PF00665 Integrase core domain NT98_4778 PF13333 Integrase core domain NT98_478 PF08386 TAP-like protein NT98_478 PF00561 alpha/beta hydrolase fold NT98_4780 PF00005 ABC transporter NT98_4785 PF01047 MarR family NT98_4786 PF07690 Major Facilitator Superfamily NT98_4787 PF02702 Osmosensitive K+ channel His kinase sensor domain NT98_4789 PF02669 K+-transporting ATPase, c chain NT98_479 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NT98_479 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NT98_4791 PF03814 Potassium-transporting ATPase A subunit NT98_4795 PF08543 Phosphomethylpyrimidine kinase NT98_4796 PF00899 ThiF family NT98_4797 PF05690 Thiazole biosynthesis protein ThiG NT98_4798 PF02597 ThiS family NT98_4799 PF01266 FAD dependent oxidoreductase NT98_48 PF02163 Peptidase family M50 NT98_480 PF01037 Lrp/AsnC ligand binding domain NT98_4800 PF02581 Thiamine monophosphate synthase NT98_4801 PF09084 NMT1/THI5 like NT98_4802 PF00528 Binding-protein-dependent transport system inner membrane component NT98_4803 PF00005 ABC transporter NT98_4804 PF03070 TENA/THI-4/PQQC family NT98_4805 PF00246 Zinc carboxypeptidase NT98_4805 PF08239 Bacterial SH3 domain NT98_4808 PF00571 CBS domain NT98_481 PF00155 Aminotransferase class I and II NT98_482 PF00575 S1 RNA binding domain NT98_483 PF04070 Domain of unknown function (DUF378) NT98_4834 PF00873 AcrB/AcrD/AcrF family NT98_4837 PF00528 Binding-protein-dependent transport system inner membrane component NT98_4838 PF00528 Binding-protein-dependent transport system inner membrane component NT98_4839 PF12849 PBP superfamily domain NT98_484 PF00342 Phosphoglucose isomerase NT98_4840 PF07664 Ferrous iron transport protein B C terminus NT98_4840 PF02421 Ferrous iron transport protein B NT98_4840 PF07670 Nucleoside recognition NT98_4840 PF17910 FeoB cytosolic helical domain NT98_4840 PF04023 FeoA domain NT98_4841 PF02421 Ferrous iron transport protein B NT98_4841 PF17910 FeoB cytosolic helical domain NT98_4841 PF07664 Ferrous iron transport protein B C terminus NT98_4841 PF07670 Nucleoside recognition NT98_4842 PF07670 Nucleoside recognition NT98_4842 PF07664 Ferrous iron transport protein B C terminus NT98_4842 PF02421 Ferrous iron transport protein B NT98_4842 PF17910 FeoB cytosolic helical domain NT98_4843 PF05504 Spore germination B3/ GerAC like, C-terminal NT98_4844 PF03845 Spore germination protein NT98_4845 PF03323 Bacillus/Clostridium GerA spore germination protein NT98_4846 PF00474 Sodium:solute symporter family NT98_4847 PF11755 Protein of unknown function (DUF3311) NT98_4848 PF07687 Peptidase dimerisation domain NT98_4848 PF01546 Peptidase family M20/M25/M40 NT98_4849 PF13529 Peptidase_C39 like family NT98_485 PF07885 Ion channel NT98_485 PF02254 TrkA-N domain NT98_4850 PF00324 Amino acid permease NT98_4851 PF02790 Cytochrome C oxidase subunit II, transmembrane domain NT98_4852 PF00115 Cytochrome C and Quinol oxidase polypeptide I NT98_4853 PF00510 Cytochrome c oxidase subunit III NT98_4855 PF02254 TrkA-N domain NT98_4855 PF00999 Sodium/hydrogen exchanger family NT98_4855 PF02080 TrkA-C domain NT98_4856 PF13673 Acetyltransferase (GNAT) domain NT98_4859 PF00860 Permease family NT98_486 PF08868 YugN-like family NT98_4860 PF00324 Amino acid permease NT98_4863 PF05525 Branched-chain amino acid transport protein NT98_4864 PF00854 POT family NT98_4865 PF04203 Sortase domain NT98_4867 PF01381 Helix-turn-helix NT98_4868 PF03990 G5-linked-Ubiquitin-like domain NT98_4868 PF07501 G5 domain NT98_4868 PF06725 3D domain NT98_4869 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NT98_4869 PF02743 Cache domain NT98_4869 PF00672 HAMP domain NT98_487 PF02308 MgtC family NT98_4870 PF02673 Bacitracin resistance protein BacA NT98_4875 PF03372 Endonuclease/Exonuclease/phosphatase family NT98_4876 PF00882 Zinc dependent phospholipase C NT98_4878 PF00107 Zinc-binding dehydrogenase NT98_4878 PF08240 Alcohol dehydrogenase GroES-like domain NT98_4880 PF05547 Immune inhibitor A peptidase M6 NT98_4881 PF00923 Transaldolase/Fructose-6-phosphate aldolase NT98_4882 PF13407 Periplasmic binding protein domain NT98_4883 PF02653 Branched-chain amino acid transport system / permease component NT98_4884 PF00005 ABC transporter NT98_4885 PF05025 RbsD / FucU transport protein family NT98_4886 PF00294 pfkB family carbohydrate kinase NT98_4887 PF00356 Bacterial regulatory proteins, lacI family NT98_4888 PF07690 Major Facilitator Superfamily NT98_4889 PF01047 MarR family NT98_4890 PF07690 Major Facilitator Superfamily NT98_4891 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NT98_4891 PF00005 ABC transporter NT98_4892 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NT98_4892 PF00005 ABC transporter NT98_4893 PF00528 Binding-protein-dependent transport system inner membrane component NT98_4894 PF00528 Binding-protein-dependent transport system inner membrane component NT98_4895 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NT98_4897 PF00582 Universal stress protein family NT98_4898 PF01740 STAS domain NT98_4898 PF00916 Sulfate permease family NT98_49 PF08741 YwhD family NT98_4900 PF00486 Transcriptional regulatory protein, C terminal NT98_4900 PF00072 Response regulator receiver domain NT98_4901 PF00672 HAMP domain NT98_4901 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_4901 PF18698 Histidine kinase sensor domain NT98_4901 PF00512 His Kinase A (phospho-acceptor) domain NT98_4901 PF00989 PAS fold NT98_4902 PF01872 RibD C-terminal domain NT98_4903 PF08279 HTH domain NT98_4903 PF13280 WYL domain NT98_4908 PF00324 Amino acid permease NT98_4909 PF00528 Binding-protein-dependent transport system inner membrane component NT98_4910 PF00528 Binding-protein-dependent transport system inner membrane component NT98_4911 PF00497 Bacterial extracellular solute-binding proteins, family 3 NT98_4912 PF00005 ABC transporter NT98_4913 PF01235 Sodium:alanine symporter family NT98_4914 PF01636 Phosphotransferase enzyme family NT98_4915 PF12389 Camelysin metallo-endopeptidase NT98_4916 PF05922 Peptidase inhibitor I9 NT98_4916 PF13860 FlgD Ig-like domain NT98_4916 PF02225 PA domain NT98_4916 PF00082 Subtilase family NT98_4917 PF00196 Bacterial regulatory proteins, luxR family NT98_4917 PF00072 Response regulator receiver domain NT98_4918 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_4918 PF13492 GAF domain NT98_4918 PF07730 Histidine kinase NT98_4919 PF03323 Bacillus/Clostridium GerA spore germination protein NT98_4923 PF16657 Maltogenic Amylase, C-terminal domain NT98_4923 PF00128 Alpha amylase, catalytic domain NT98_4924 PF00367 phosphotransferase system, EIIB NT98_4924 PF02378 Phosphotransferase system, EIIC NT98_4925 PF00392 Bacterial regulatory proteins, gntR family NT98_4925 PF07702 UTRA domain NT98_4926 PF13520 Amino acid permease NT98_4927 PF03707 Bacterial signalling protein N terminal repeat NT98_4927 PF00990 Diguanylate cyclase, GGDEF domain NT98_4927 PF00563 EAL domain NT98_4930 PF13091 PLD-like domain NT98_4930 PF13396 Phospholipase_D-nuclease N-terminal NT98_4931 PF07728 AAA domain (dynein-related subfamily) NT98_4932 PF00092 von Willebrand factor type A domain NT98_4933 PF13344 Haloacid dehalogenase-like hydrolase NT98_4933 PF00293 NUDIX domain NT98_4934 PF00156 Phosphoribosyl transferase domain NT98_4935 PF01370 NAD dependent epimerase/dehydratase family NT98_4936 PF00155 Aminotransferase class I and II NT98_4937 PF08241 Methyltransferase domain NT98_4938 PF00005 ABC transporter NT98_4939 PF01032 FecCD transport family NT98_4940 PF01032 FecCD transport family NT98_4941 PF01497 Periplasmic binding protein NT98_4942 PF00854 POT family NT98_4943 PF08141 Small acid-soluble spore protein H family NT98_4944 PF01022 Bacterial regulatory protein, arsR family NT98_4945 PF02652 L-lactate permease NT98_4946 PF10415 Fumarase C C-terminus NT98_4946 PF00206 Lyase NT98_4947 PF00571 CBS domain NT98_4947 PF03471 Transporter associated domain NT98_4947 PF01595 Cyclin M transmembrane N-terminal domain NT98_4948 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NT98_4949 PF01773 Na+ dependent nucleoside transporter N-terminus NT98_4949 PF07662 Na+ dependent nucleoside transporter C-terminus NT98_495 PF05698 Bacterial trigger factor protein (TF) C-terminus NT98_495 PF05697 Bacterial trigger factor protein (TF) NT98_4950 PF03816 Cell envelope-related transcriptional attenuator domain NT98_4951 PF04294 VanW like protein NT98_4955 PF01447 Thermolysin metallopeptidase, catalytic domain NT98_4955 PF02868 Thermolysin metallopeptidase, alpha-helical domain NT98_4955 PF07504 Fungalysin/Thermolysin Propeptide Motif NT98_4955 PF03413 Peptidase propeptide and YPEB domain NT98_4959 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain NT98_4959 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NT98_4959 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NT98_4960 PF00403 Heavy-metal-associated domain NT98_4961 PF01022 Bacterial regulatory protein, arsR family NT98_4962 PF13520 Amino acid permease NT98_4963 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NT98_4963 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NT98_4965 PF07849 Protein of unknown function (DUF1641) NT98_4966 PF00384 Molybdopterin oxidoreductase NT98_4966 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NT98_4966 PF01568 Molydopterin dinucleotide binding domain NT98_4966 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NT98_4966 PF00037 4Fe-4S binding domain NT98_4967 PF02634 FdhD/NarQ family NT98_4968 PF00583 Acetyltransferase (GNAT) family NT98_4968 PF13508 Acetyltransferase (GNAT) domain NT98_4970 PF00486 Transcriptional regulatory protein, C terminal NT98_4970 PF00072 Response regulator receiver domain NT98_4971 PF00989 PAS fold NT98_4971 PF00512 His Kinase A (phospho-acceptor) domain NT98_4971 PF18698 Histidine kinase sensor domain NT98_4971 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_4971 PF00672 HAMP domain NT98_4973 PF00155 Aminotransferase class I and II NT98_4973 PF00392 Bacterial regulatory proteins, gntR family NT98_4974 PF00892 EamA-like transporter family NT98_4976 PF00390 Malic enzyme, N-terminal domain NT98_4976 PF03949 Malic enzyme, NAD binding domain NT98_4977 PF03390 2-hydroxycarboxylate transporter family NT98_4978 PF00072 Response regulator receiver domain NT98_4979 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_4979 PF00989 PAS fold NT98_4979 PF17203 Single cache domain 3 NT98_4979 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NT98_4980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NT98_4980 PF00672 HAMP domain NT98_4980 PF02743 Cache domain NT98_4981 PF13529 Peptidase_C39 like family NT98_4983 PF00512 His Kinase A (phospho-acceptor) domain NT98_4983 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_4984 PF00486 Transcriptional regulatory protein, C terminal NT98_4984 PF00072 Response regulator receiver domain NT98_4989 PF03600 Citrate transporter NT98_4990 PF00072 Response regulator receiver domain NT98_4990 PF12431 Transcriptional regulator NT98_4991 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_4991 PF00989 PAS fold NT98_4991 PF17203 Single cache domain 3 NT98_4991 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NT98_4992 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NT98_4992 PF02743 Cache domain NT98_4992 PF00672 HAMP domain NT98_4993 PF15975 Flotillin NT98_4993 PF01145 SPFH domain / Band 7 family NT98_4995 PF08453 Peptidase family M9 N-terminal NT98_4995 PF01752 Collagenase NT98_4995 PF18496 Collagenase G catalytic helper subdomain NT98_4996 PF02028 BCCT, betaine/carnitine/choline family transporter NT98_4999 PF00072 Response regulator receiver domain NT98_4999 PF04397 LytTr DNA-binding domain NT98_50 PF00905 Penicillin binding protein transpeptidase domain NT98_50 PF00912 Transglycosylase NT98_5000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_5000 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NT98_5002 PF04647 Accessory gene regulator B NT98_5010 PF00005 ABC transporter NT98_5017 PF00005 ABC transporter NT98_5018 PF04285 Protein of unknown function (DUF444) NT98_5019 PF08298 PrkA AAA domain NT98_5019 PF06798 PrkA serine protein kinase C-terminal domain NT98_5021 PF00563 EAL domain NT98_5021 PF03707 Bacterial signalling protein N terminal repeat NT98_5021 PF00990 Diguanylate cyclase, GGDEF domain NT98_5022 PF00588 SpoU rRNA Methylase family NT98_5023 PF12671 Putative amidase domain NT98_5024 PF08331 Domain of unknown function (DUF1730) NT98_5026 PF13462 Thioredoxin NT98_5027 PF00912 Transglycosylase NT98_5027 PF00905 Penicillin binding protein transpeptidase domain NT98_5028 PF00293 NUDIX domain NT98_5028 PF13344 Haloacid dehalogenase-like hydrolase NT98_5029 PF01709 Transcriptional regulator NT98_5051 PF11023 Zinc-ribbon containing domain NT98_5052 PF01475 Ferric uptake regulator family NT98_5053 PF00578 AhpC/TSA family NT98_5054 PF07885 Ion channel NT98_5057 PF00005 ABC transporter NT98_5058 PF00202 Aminotransferase class-III NT98_5059 PF01493 GXGXG motif NT98_5059 PF00310 Glutamine amidotransferases class-II NT98_5059 PF04898 Glutamate synthase central domain NT98_5059 PF01645 Conserved region in glutamate synthase NT98_5060 PF06081 Aromatic acid exporter family member 1 NT98_5061 PF00664 ABC transporter transmembrane region NT98_5061 PF00005 ABC transporter NT98_5062 PF04167 Protein of unknown function (DUF402) NT98_5063 PF14182 YgaB-like protein NT98_5064 PF04259 Small, acid-soluble spore protein, gamma-type NT98_5066 PF00730 HhH-GPD superfamily base excision DNA repair protein NT98_5066 PF14815 NUDIX domain NT98_5067 PF04307 LexA-binding, inner membrane-associated putative hydrolase NT98_5068 PF14043 WVELL protein NT98_5069 PF08176 Small acid-soluble spore protein K family NT98_5072 PF02631 RecX family NT98_5073 PF01370 NAD dependent epimerase/dehydratase family NT98_5073 PF08338 Domain of unknown function (DUF1731) NT98_5074 PF01979 Amidohydrolase family NT98_5077 PF04101 Glycosyltransferase family 28 C-terminal domain NT98_5077 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase NT98_5078 PF04055 Radical SAM superfamily NT98_5079 PF02901 Pyruvate formate lyase-like NT98_5079 PF01228 Glycine radical NT98_5080 PF00535 Glycosyl transferase family 2 NT98_5081 PF00551 Formyl transferase NT98_5081 PF02911 Formyl transferase, C-terminal domain NT98_5081 PF01370 NAD dependent epimerase/dehydratase family NT98_5082 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NT98_5082 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NT98_5082 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NT98_5083 PF00535 Glycosyl transferase family 2 NT98_5087 PF00144 Beta-lactamase NT98_5088 PF02378 Phosphotransferase system, EIIC NT98_5088 PF00367 phosphotransferase system, EIIB NT98_5089 PF04960 Glutaminase NT98_5094 PF07687 Peptidase dimerisation domain NT98_5094 PF01546 Peptidase family M20/M25/M40 NT98_5095 PF00324 Amino acid permease NT98_5097 PF13426 PAS domain NT98_5097 PF00158 Sigma-54 interaction domain NT98_5097 PF02954 Bacterial regulatory protein, Fis family NT98_5099 PF01416 tRNA pseudouridine synthase NT98_51 PF03009 Glycerophosphoryl diester phosphodiesterase family NT98_5100 PF01938 TRAM domain NT98_5100 PF05958 tRNA (Uracil-5-)-methyltransferase NT98_5101 PF00730 HhH-GPD superfamily base excision DNA repair protein NT98_5102 PF01522 Polysaccharide deacetylase NT98_5103 PF05681 Fumarate hydratase (Fumerase) NT98_5103 PF05683 Fumarase C-terminus NT98_5105 PF08756 YfkB-like domain NT98_5105 PF04055 Radical SAM superfamily NT98_5106 PF14167 YfkD-like protein NT98_5107 PF01699 Sodium/calcium exchanger protein NT98_5108 PF16242 Pyridoxamine 5'-phosphate oxidase like NT98_5111 PF09335 SNARE associated Golgi protein NT98_5113 PF10502 Signal peptidase, peptidase S26 NT98_5115 PF00892 EamA-like transporter family NT98_5117 PF03631 Virulence factor BrkB NT98_5119 PF01451 Low molecular weight phosphotyrosine protein phosphatase NT98_5120 PF06569 Protein of unknown function (DUF1128) NT98_5121 PF00689 Cation transporting ATPase, C-terminus NT98_5121 PF00690 Cation transporter/ATPase, N-terminus NT98_5122 PF05816 Toxic anion resistance protein (TelA) NT98_5123 PF14266 Putative component of 'biosynthetic module' NT98_5124 PF03741 Integral membrane protein TerC family NT98_5125 PF02342 TerD domain NT98_5126 PF02342 TerD domain NT98_5127 PF02342 TerD domain NT98_5128 PF00480 ROK family NT98_5130 PF03129 Anticodon binding domain NT98_5130 PF09180 Prolyl-tRNA synthetase, C-terminal NT98_5130 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NT98_5133 PF11700 Vacuole effluxer Atg22 like NT98_5137 PF00440 Bacterial regulatory proteins, tetR family NT98_5137 PF08360 QacR-like protein, C-terminal region NT98_5143 PF00704 Glycosyl hydrolases family 18 NT98_5143 PF00041 Fibronectin type III domain NT98_5144 PF12848 ABC transporter NT98_5144 PF00005 ABC transporter NT98_5146 PF00005 ABC transporter NT98_5148 PF00528 Binding-protein-dependent transport system inner membrane component NT98_5149 PF01910 Thiamine-binding protein NT98_515 PF04542 Sigma-70 region 2 NT98_515 PF08281 Sigma-70, region 4 NT98_5150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NT98_5150 PF00672 HAMP domain NT98_5151 PF03605 Anaerobic c4-dicarboxylate membrane transporter NT98_5152 PF02581 Thiamine monophosphate synthase NT98_5153 PF02110 Hydroxyethylthiazole kinase family NT98_5154 PF01751 Toprim domain NT98_5154 PF01131 DNA topoisomerase NT98_5155 PF01061 ABC-2 type transporter NT98_5156 PF03372 Endonuclease/Exonuclease/phosphatase family NT98_5157 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NT98_5157 PF00367 phosphotransferase system, EIIB NT98_5157 PF02378 Phosphotransferase system, EIIC NT98_5158 PF00128 Alpha amylase, catalytic domain NT98_5158 PF16657 Maltogenic Amylase, C-terminal domain NT98_5159 PF08031 Berberine and berberine like NT98_5159 PF01565 FAD binding domain NT98_5160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NT98_5160 PF02743 Cache domain NT98_5160 PF00672 HAMP domain NT98_5161 PF00005 ABC transporter NT98_5162 PF00497 Bacterial extracellular solute-binding proteins, family 3 NT98_5163 PF00528 Binding-protein-dependent transport system inner membrane component NT98_5165 PF01266 FAD dependent oxidoreductase NT98_5165 PF00355 Rieske [2Fe-2S] domain NT98_5166 PF07690 Major Facilitator Superfamily NT98_5167 PF10127 RNA repair pathway DNA polymerase beta family NT98_517 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NT98_517 PF00056 lactate/malate dehydrogenase, NAD binding domain NT98_5171 PF01609 Transposase DDE domain NT98_5177 PF12728 Helix-turn-helix domain NT98_5179 PF07992 Pyridine nucleotide-disulphide oxidoreductase NT98_518 PF05922 Peptidase inhibitor I9 NT98_518 PF00082 Subtilase family NT98_518 PF02225 PA domain NT98_518 PF13860 FlgD Ig-like domain NT98_5180 PF01497 Periplasmic binding protein NT98_5181 PF01032 FecCD transport family NT98_5182 PF01032 FecCD transport family NT98_5183 PF00596 Class II Aldolase and Adducin N-terminal domain NT98_5185 PF01636 Phosphotransferase enzyme family NT98_5186 PF00578 AhpC/TSA family NT98_5187 PF13192 Thioredoxin domain NT98_5187 PF07992 Pyridine nucleotide-disulphide oxidoreductase NT98_5189 PF07687 Peptidase dimerisation domain NT98_5189 PF01546 Peptidase family M20/M25/M40 NT98_5192 PF13378 Enolase C-terminal domain-like NT98_5192 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NT98_5195 PF07308 Protein of unknown function (DUF1456) NT98_5196 PF00989 PAS fold NT98_5196 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_5196 PF00512 His Kinase A (phospho-acceptor) domain NT98_5196 PF13426 PAS domain NT98_5196 PF13188 PAS domain NT98_5197 PF01207 Dihydrouridine synthase (Dus) NT98_5198 PF05958 tRNA (Uracil-5-)-methyltransferase NT98_5198 PF02475 Met-10+ like-protein NT98_5198 PF01938 TRAM domain NT98_5199 PF07670 Nucleoside recognition NT98_5199 PF01773 Na+ dependent nucleoside transporter N-terminus NT98_5199 PF07662 Na+ dependent nucleoside transporter C-terminus NT98_52 PF13411 MerR HTH family regulatory protein NT98_520 PF02806 Alpha amylase, C-terminal all-beta domain NT98_520 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NT98_520 PF00128 Alpha amylase, catalytic domain NT98_5202 PF02073 Thermophilic metalloprotease (M29) NT98_5203 PF00893 Small Multidrug Resistance protein NT98_5204 PF00171 Aldehyde dehydrogenase family NT98_5205 PF00158 Sigma-54 interaction domain NT98_5206 PF00202 Aminotransferase class-III NT98_5208 PF13419 Haloacid dehalogenase-like hydrolase NT98_5209 PF00781 Diacylglycerol kinase catalytic domain NT98_521 PF00483 Nucleotidyl transferase NT98_5210 PF02934 GatB/GatE catalytic domain NT98_5210 PF02637 GatB domain NT98_5211 PF01425 Amidase NT98_5212 PF02686 Glu-tRNAGln amidotransferase C subunit NT98_5213 PF05360 yiaA/B two helix domain NT98_5214 PF01047 MarR family NT98_5215 PF17886 HSP20-like domain found in ArsA NT98_5215 PF02374 Anion-transporting ATPase NT98_5218 PF03180 NLPA lipoprotein NT98_5219 PF00528 Binding-protein-dependent transport system inner membrane component NT98_522 PF00483 Nucleotidyl transferase NT98_5220 PF09383 NIL domain NT98_5220 PF00005 ABC transporter NT98_5221 PF00857 Isochorismatase family NT98_5223 PF00171 Aldehyde dehydrogenase family NT98_5224 PF01925 Sulfite exporter TauE/SafE NT98_5225 PF07537 CamS sex pheromone cAM373 precursor NT98_5226 PF12826 Helix-hairpin-helix motif NT98_5226 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NT98_5226 PF03120 NAD-dependent DNA ligase OB-fold domain NT98_5226 PF01653 NAD-dependent DNA ligase adenylation domain NT98_5226 PF00533 BRCA1 C Terminus (BRCT) domain NT98_5227 PF13361 UvrD-like helicase C-terminal domain NT98_5227 PF00580 UvrD/REP helicase N-terminal domain NT98_5228 PF01884 PcrB family NT98_523 PF08323 Starch synthase catalytic domain NT98_523 PF00534 Glycosyl transferases group 1 NT98_5232 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NT98_5232 PF02843 Phosphoribosylglycinamide synthetase, C domain NT98_5232 PF02844 Phosphoribosylglycinamide synthetase, N domain NT98_5233 PF01808 AICARFT/IMPCHase bienzyme NT98_5233 PF02142 MGS-like domain NT98_5234 PF00551 Formyl transferase NT98_5235 PF02769 AIR synthase related protein, C-terminal domain NT98_5235 PF00586 AIR synthase related protein, N-terminal domain NT98_5236 PF00156 Phosphoribosyl transferase domain NT98_5237 PF00586 AIR synthase related protein, N-terminal domain NT98_5237 PF02769 AIR synthase related protein, C-terminal domain NT98_5237 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NT98_5239 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase NT98_524 PF00343 Carbohydrate phosphorylase NT98_5240 PF01259 SAICAR synthetase NT98_5241 PF00206 Lyase NT98_5241 PF10397 Adenylosuccinate lyase C-terminus NT98_5242 PF02222 ATP-grasp domain NT98_5242 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NT98_5243 PF00731 AIR carboxylase NT98_5247 PF01619 Proline dehydrogenase NT98_5248 PF00392 Bacterial regulatory proteins, gntR family NT98_5248 PF00155 Aminotransferase class I and II NT98_5253 PF00535 Glycosyl transferase family 2 NT98_5257 PF08241 Methyltransferase domain NT98_5259 PF14307 Glycosyltransferase WbsX NT98_5259 PF05045 Rhamnan synthesis protein F NT98_5260 PF05045 Rhamnan synthesis protein F NT98_5260 PF14307 Glycosyltransferase WbsX NT98_5265 PF01323 DSBA-like thioredoxin domain NT98_527 PF00376 MerR family regulatory protein NT98_527 PF09278 MerR, DNA binding NT98_5271 PF16736 Single Cache-like NT98_5271 PF00989 PAS fold NT98_5271 PF00512 His Kinase A (phospho-acceptor) domain NT98_5271 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_5272 PF00486 Transcriptional regulatory protein, C terminal NT98_5272 PF00072 Response regulator receiver domain NT98_5273 PF00860 Permease family NT98_5274 PF02540 NAD synthase NT98_5274 PF00958 GMP synthase C terminal domain NT98_5274 PF00117 Glutamine amidotransferase class-I NT98_5275 PF00118 TCP-1/cpn60 chaperonin family NT98_5276 PF00166 Chaperonin 10 Kd subunit NT98_5277 PF02517 CPBP intramembrane metalloprotease NT98_5279 PF02629 CoA binding domain NT98_5279 PF06971 Putative DNA-binding protein N-terminus NT98_5280 PF00005 ABC transporter NT98_5280 PF16326 ABC transporter C-terminal domain NT98_5280 PF12848 ABC transporter NT98_5281 PF00814 Glycoprotease family NT98_5282 PF00583 Acetyltransferase (GNAT) family NT98_5283 PF00814 Glycoprotease family NT98_5284 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NT98_529 PF00313 'Cold-shock' DNA-binding domain NT98_53 PF07690 Major Facilitator Superfamily NT98_530 PF01258 Prokaryotic dksA/traR C4-type zinc finger NT98_5302 PF10263 SprT-like family NT98_5302 PF17283 SprT-like zinc ribbon domain NT98_5303 PF09371 Tex-like protein N-terminal domain NT98_5303 PF16921 Tex protein YqgF-like domain NT98_5303 PF17674 HHH domain NT98_5303 PF00575 S1 RNA binding domain NT98_5304 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system NT98_5305 PF01402 Ribbon-helix-helix protein, copG family NT98_5306 PF00842 Alanine racemase, C-terminal domain NT98_5306 PF01168 Alanine racemase, N-terminal domain NT98_5308 PF01648 4'-phosphopantetheinyl transferase superfamily NT98_5309 PF03851 UV-endonuclease UvdE NT98_531 PF01040 UbiA prenyltransferase family NT98_5310 PF01694 Rhomboid family NT98_5311 PF00271 Helicase conserved C-terminal domain NT98_5311 PF00270 DEAD/DEAH box helicase NT98_5312 PF01225 Mur ligase family, catalytic domain NT98_5312 PF02875 Mur ligase family, glutamate ligase domain NT98_5312 PF08245 Mur ligase middle domain NT98_5313 PF01820 D-ala D-ala ligase N-terminus NT98_5313 PF07478 D-ala D-ala ligase C-terminus NT98_5314 PF07690 Major Facilitator Superfamily NT98_5315 PF13520 Amino acid permease NT98_5317 PF01557 Fumarylacetoacetate (FAA) hydrolase family NT98_5318 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NT98_532 PF00425 chorismate binding enzyme NT98_5325 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NT98_5325 PF00005 ABC transporter NT98_5326 PF00005 ABC transporter NT98_5326 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NT98_5328 PF00528 Binding-protein-dependent transport system inner membrane component NT98_5329 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NT98_533 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NT98_533 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NT98_533 PF16582 Middle domain of thiamine pyrophosphate NT98_5330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NT98_5334 PF00005 ABC transporter NT98_5335 PF00196 Bacterial regulatory proteins, luxR family NT98_5335 PF00072 Response regulator receiver domain NT98_5336 PF07730 Histidine kinase NT98_5337 PF00005 ABC transporter NT98_5337 PF16326 ABC transporter C-terminal domain NT98_5337 PF12848 ABC transporter NT98_534 PF00561 alpha/beta hydrolase fold NT98_5340 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) NT98_5343 PF01026 TatD related DNase NT98_5346 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) NT98_5346 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 NT98_5348 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NT98_5348 PF00356 Bacterial regulatory proteins, lacI family NT98_535 PF00378 Enoyl-CoA hydratase/isomerase NT98_5350 PF01553 Acyltransferase NT98_5351 PF14142 YrzO-like protein NT98_5352 PF00892 EamA-like transporter family NT98_5353 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NT98_5353 PF03466 LysR substrate binding domain NT98_5355 PF12727 PBP superfamily domain NT98_5355 PF12728 Helix-turn-helix domain NT98_5357 PF00528 Binding-protein-dependent transport system inner membrane component NT98_5358 PF06800 Sugar transport protein NT98_5359 PF04973 Nicotinamide mononucleotide transporter NT98_536 PF00501 AMP-binding enzyme NT98_536 PF13193 AMP-binding enzyme C-terminal domain NT98_5360 PF03807 NADP oxidoreductase coenzyme F420-dependent NT98_5360 PF14748 Pyrroline-5-carboxylate reductase dimerisation NT98_5361 PF00248 Aldo/keto reductase family NT98_5362 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NT98_5363 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NT98_5365 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NT98_5366 PF00005 ABC transporter NT98_5366 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NT98_5367 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NT98_5367 PF00005 ABC transporter NT98_5368 PF12911 N-terminal TM domain of oligopeptide transport permease C NT98_5368 PF00528 Binding-protein-dependent transport system inner membrane component NT98_5369 PF00528 Binding-protein-dependent transport system inner membrane component NT98_537 PF13378 Enolase C-terminal domain-like NT98_537 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NT98_5373 PF07690 Major Facilitator Superfamily NT98_5376 PF07690 Major Facilitator Superfamily NT98_5377 PF01565 FAD binding domain NT98_538 PF00072 Response regulator receiver domain NT98_538 PF00486 Transcriptional regulatory protein, C terminal NT98_5386 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region NT98_5386 PF00326 Prolyl oligopeptidase family NT98_5387 PF01380 SIS domain NT98_5388 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NT98_5388 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NT98_5388 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NT98_5388 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NT98_5389 PF07949 YbbR-like protein NT98_539 PF00512 His Kinase A (phospho-acceptor) domain NT98_539 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_5390 PF02457 DisA bacterial checkpoint controller nucleotide-binding NT98_5391 PF00491 Arginase family NT98_5392 PF02595 Glycerate kinase family NT98_54 PF17284 Spermidine synthase tetramerisation domain NT98_540 PF02557 D-alanyl-D-alanine carboxypeptidase NT98_5408 PF01522 Polysaccharide deacetylase NT98_5409 PF14089 KinB-signalling pathway activation in sporulation NT98_5410 PF17898 Spore germination GerD central core domain NT98_5411 PF10609 NUBPL iron-transfer P-loop NTPase NT98_5412 PF01520 N-acetylmuramoyl-L-alanine amidase NT98_5414 PF00380 Ribosomal protein S9/S16 NT98_5415 PF00572 Ribosomal protein L13 NT98_5416 PF01416 tRNA pseudouridine synthase NT98_5417 PF02361 Cobalt transport protein NT98_5418 PF00005 ABC transporter NT98_5419 PF00005 ABC transporter NT98_5420 PF01196 Ribosomal protein L17 NT98_5421 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NT98_5421 PF01000 RNA polymerase Rpb3/RpoA insert domain NT98_5421 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NT98_5422 PF00411 Ribosomal protein S11 NT98_5423 PF00416 Ribosomal protein S13/S18 NT98_5424 PF00444 Ribosomal protein L36 NT98_5425 PF01176 Translation initiation factor 1A / IF-1 NT98_5426 PF00557 Metallopeptidase family M24 NT98_5427 PF05191 Adenylate kinase, active site lid NT98_5428 PF00344 SecY translocase NT98_5429 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NT98_543 PF01979 Amidohydrolase family NT98_5430 PF00327 Ribosomal protein L30p/L7e NT98_5431 PF00333 Ribosomal protein S5, N-terminal domain NT98_5431 PF03719 Ribosomal protein S5, C-terminal domain NT98_5432 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NT98_5433 PF00347 Ribosomal protein L6 NT98_5434 PF00410 Ribosomal protein S8 NT98_5435 PF00253 Ribosomal protein S14p/S29e NT98_5436 PF00281 Ribosomal protein L5 NT98_5436 PF00673 ribosomal L5P family C-terminus NT98_5437 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NT98_5437 PF00467 KOW motif NT98_5438 PF00238 Ribosomal protein L14p/L23e NT98_5439 PF00366 Ribosomal protein S17 NT98_544 PF03841 L-seryl-tRNA selenium transferase NT98_5440 PF00831 Ribosomal L29 protein NT98_5441 PF00252 Ribosomal protein L16p/L10e NT98_5442 PF07650 KH domain NT98_5442 PF00189 Ribosomal protein S3, C-terminal domain NT98_5443 PF00237 Ribosomal protein L22p/L17e NT98_5444 PF00203 Ribosomal protein S19 NT98_5445 PF03947 Ribosomal Proteins L2, C-terminal domain NT98_5445 PF00181 Ribosomal Proteins L2, RNA binding domain NT98_5446 PF00276 Ribosomal protein L23 NT98_5447 PF00573 Ribosomal protein L4/L1 family NT98_5448 PF00297 Ribosomal protein L3 NT98_5449 PF00338 Ribosomal protein S10p/S20e NT98_545 PF07071 KDGP aldolase NT98_5450 PF03143 Elongation factor Tu C-terminal domain NT98_5450 PF03144 Elongation factor Tu domain 2 NT98_5450 PF00009 Elongation factor Tu GTP binding domain NT98_5451 PF00009 Elongation factor Tu GTP binding domain NT98_5451 PF03144 Elongation factor Tu domain 2 NT98_5451 PF14492 Elongation Factor G, domain II NT98_5451 PF03764 Elongation factor G, domain IV NT98_5451 PF00679 Elongation factor G C-terminus NT98_5452 PF00177 Ribosomal protein S7p/S5e NT98_5453 PF00164 Ribosomal protein S12/S23 NT98_5454 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family NT98_5455 PF04997 RNA polymerase Rpb1, domain 1 NT98_5455 PF05000 RNA polymerase Rpb1, domain 4 NT98_5455 PF04998 RNA polymerase Rpb1, domain 5 NT98_5455 PF04983 RNA polymerase Rpb1, domain 3 NT98_5455 PF00623 RNA polymerase Rpb1, domain 2 NT98_5456 PF10385 RNA polymerase beta subunit external 1 domain NT98_5456 PF04560 RNA polymerase Rpb2, domain 7 NT98_5456 PF04565 RNA polymerase Rpb2, domain 3 NT98_5456 PF04561 RNA polymerase Rpb2, domain 2 NT98_5456 PF04563 RNA polymerase beta subunit NT98_5456 PF00562 RNA polymerase Rpb2, domain 6 NT98_5457 PF05175 Methyltransferase small domain NT98_5458 PF16320 Ribosomal protein L7/L12 dimerisation domain NT98_5458 PF00542 Ribosomal protein L7/L12 C-terminal domain NT98_5459 PF00466 Ribosomal protein L10 NT98_5460 PF00687 Ribosomal protein L1p/L10e family NT98_5461 PF03946 Ribosomal protein L11, N-terminal domain NT98_5461 PF00298 Ribosomal protein L11, RNA binding domain NT98_5462 PF02357 Transcription termination factor nusG NT98_5462 PF00467 KOW motif NT98_5463 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NT98_5464 PF08281 Sigma-70, region 4 NT98_5464 PF04542 Sigma-70 region 2 NT98_5465 PF05991 YacP-like NYN domain NT98_5466 PF00588 SpoU rRNA Methylase family NT98_5466 PF08032 RNA 2'-O ribose methyltransferase substrate binding NT98_5467 PF00636 Ribonuclease III domain NT98_5468 PF01406 tRNA synthetases class I (C) catalytic domain NT98_5468 PF09190 DALR domain NT98_5469 PF00132 Bacterial transferase hexapeptide (six repeats) NT98_5469 PF06426 Serine acetyltransferase, N-terminal NT98_5470 PF00749 tRNA synthetases class I (E and Q), catalytic domain NT98_5471 PF02542 YgbB family NT98_5472 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NT98_5474 PF02457 DisA bacterial checkpoint controller nucleotide-binding NT98_5474 PF10635 DisA bacterial checkpoint controller linker region NT98_5475 PF18073 Rubredoxin metal binding domain NT98_5476 PF07724 AAA domain (Cdc48 subfamily) NT98_5476 PF17871 AAA lid domain NT98_5476 PF02861 Clp amino terminal domain, pathogenicity island component NT98_5476 PF10431 C-terminal, D2-small domain, of ClpB protein NT98_5476 PF00004 ATPase family associated with various cellular activities (AAA) NT98_5477 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain NT98_5478 PF02151 UvrB/uvrC motif NT98_5479 PF05848 CtsR N-terminal HTH domain NT98_5479 PF17727 CtsR C-terminal dimerization domain NT98_548 PF02447 GntP family permease NT98_5496 PF01336 OB-fold nucleic acid binding domain NT98_5496 PF00152 tRNA synthetases class II (D, K and N) NT98_5497 PF01207 Dihydrouridine synthase (Dus) NT98_5498 PF01381 Helix-turn-helix NT98_5499 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NT98_55 PF00491 Arginase family NT98_550 PF00440 Bacterial regulatory proteins, tetR family NT98_550 PF13977 BetI-type transcriptional repressor, C-terminal NT98_5500 PF02152 Dihydroneopterin aldolase NT98_5501 PF00809 Pterin binding enzyme NT98_5502 PF01063 Amino-transferase class IV NT98_5503 PF00117 Glutamine amidotransferase class-I NT98_5504 PF04715 Anthranilate synthase component I, N terminal region NT98_5504 PF00425 chorismate binding enzyme NT98_5505 PF00291 Pyridoxal-phosphate dependent enzyme NT98_5506 PF01430 Hsp33 protein NT98_5507 PF03309 Type III pantothenate kinase NT98_5508 PF01434 Peptidase family M41 NT98_5508 PF06480 FtsH Extracellular NT98_5508 PF17862 AAA+ lid domain NT98_5508 PF00004 ATPase family associated with various cellular activities (AAA) NT98_5510 PF09179 TilS substrate binding domain NT98_5510 PF01171 PP-loop family NT98_5510 PF11734 TilS substrate C-terminal domain NT98_5511 PF07228 Stage II sporulation protein E (SpoIIE) NT98_5514 PF00575 S1 RNA binding domain NT98_5516 PF09578 Spore cortex protein YabQ (Spore_YabQ) NT98_5517 PF07873 YabP family NT98_5518 PF01479 S4 domain NT98_5519 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NT98_5519 PF03819 MazG nucleotide pyrophosphohydrolase domain NT98_552 PF02687 FtsX-like permease family NT98_5520 PF14667 Polysaccharide biosynthesis C-terminal domain NT98_5520 PF01943 Polysaccharide biosynthesis protein NT98_5521 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin NT98_5521 PF15714 Stage V sporulation protein T C-terminal, transcription factor NT98_5522 PF17757 UvrB interaction domain NT98_5522 PF03461 TRCF domain NT98_5522 PF00271 Helicase conserved C-terminal domain NT98_5522 PF00270 DEAD/DEAH box helicase NT98_5522 PF02559 CarD-like/TRCF domain NT98_5524 PF01195 Peptidyl-tRNA hydrolase NT98_5525 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NT98_5525 PF14572 Phosphoribosyl synthetase-associated domain NT98_5526 PF00483 Nucleotidyl transferase NT98_5526 PF00132 Bacterial transferase hexapeptide (six repeats) NT98_5527 PF04026 SpoVG NT98_5528 PF01042 Endoribonuclease L-PSP NT98_5529 PF00156 Phosphoribosyl transferase domain NT98_5529 PF09182 Bacterial purine repressor, N-terminal NT98_553 PF00005 ABC transporter NT98_5530 PF08544 GHMP kinases C terminal NT98_5530 PF00288 GHMP kinases N terminal domain NT98_5531 PF00269 Small, acid-soluble spore proteins, alpha/beta type NT98_5532 PF06257 Biofilm formation stimulator VEG NT98_5533 PF05582 YabG peptidase U57 NT98_5534 PF00398 Ribosomal RNA adenine dimethylase NT98_5535 PF13662 Toprim domain NT98_5535 PF13331 Domain of unknown function (DUF4093) NT98_5536 PF01026 TatD related DNase NT98_5537 PF09334 tRNA synthetases class I (M) NT98_5537 PF01588 Putative tRNA binding domain NT98_5537 PF08264 Anticodon-binding domain of tRNA NT98_5538 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin NT98_5538 PF18277 AbrB C-terminal domain NT98_5539 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NT98_554 PF02687 FtsX-like permease family NT98_5540 PF01541 GIY-YIG catalytic domain NT98_5541 PF05175 Methyltransferase small domain NT98_5542 PF06156 Initiation control protein YabA NT98_5543 PF04468 PSP1 C-terminal conserved region NT98_5544 PF09115 DNA polymerase III, delta subunit, C terminal NT98_5545 PF02223 Thymidylate kinase NT98_5546 PF01276 Orn/Lys/Arg decarboxylase, major domain NT98_5546 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain NT98_555 PF02687 FtsX-like permease family NT98_5554 PF07441 SigmaK-factor processing regulatory protein BofA NT98_5555 PF10704 Protein of unknown function (DUF2508) NT98_5556 PF02132 RecR protein NT98_5556 PF13662 Toprim domain NT98_5557 PF02575 YbaB/EbfC DNA-binding family NT98_5558 PF12169 DNA polymerase III subunits gamma and tau domain III NT98_5559 PF14437 MafB19-like deaminase NT98_556 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_5560 PF00857 Isochorismatase family NT98_5561 PF01712 Deoxynucleoside kinase NT98_5562 PF01712 Deoxynucleoside kinase NT98_5565 PF02403 Seryl-tRNA synthetase N-terminal domain NT98_5565 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NT98_5566 PF01174 SNO glutamine amidotransferase family NT98_5567 PF01680 SOR/SNZ family NT98_5568 PF07943 Penicillin-binding protein 5, C-terminal domain NT98_5568 PF00768 D-alanyl-D-alanine carboxypeptidase NT98_5569 PF00571 CBS domain NT98_5569 PF00478 IMP dehydrogenase / GMP reductase domain NT98_557 PF00072 Response regulator receiver domain NT98_557 PF00486 Transcriptional regulatory protein, C terminal NT98_5571 PF14175 YaaC-like Protein NT98_5579 PF00521 DNA gyrase/topoisomerase IV, subunit A NT98_5579 PF03989 DNA gyrase C-terminal domain, beta-propeller NT98_558 PF01022 Bacterial regulatory protein, arsR family NT98_5580 PF00986 DNA gyrase B subunit, carboxyl terminus NT98_5580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_5580 PF01751 Toprim domain NT98_5580 PF00204 DNA gyrase B NT98_5581 PF02463 RecF/RecN/SMC N terminal domain NT98_5583 PF02768 DNA polymerase III beta subunit, C-terminal domain NT98_5583 PF00712 DNA polymerase III beta subunit, N-terminal domain NT98_5583 PF02767 DNA polymerase III beta subunit, central domain NT98_5584 PF08299 Bacterial dnaA protein helix-turn-helix NT98_5584 PF11638 DnaA N-terminal domain NT98_5584 PF00308 Bacterial dnaA protein NT98_5585 PF00468 Ribosomal protein L34 NT98_5586 PF00825 Ribonuclease P NT98_5587 PF02096 60Kd inner membrane protein NT98_5588 PF14804 Jag N-terminus NT98_5588 PF01424 R3H domain NT98_5589 PF10396 GTP-binding protein TrmE N-terminus NT98_5589 PF01926 50S ribosome-binding GTPase NT98_5589 PF12631 MnmE helical domain NT98_559 PF07853 Protein of unknown function (DUF1648) NT98_559 PF13630 SdpI/YhfL protein family NT98_5590 PF01134 Glucose inhibited division protein A NT98_5590 PF13932 GidA associated domain NT98_5591 PF02527 rRNA small subunit methyltransferase G NT98_5592 PF02195 ParB-like nuclease domain NT98_5592 PF17762 HTH domain found in ParB protein NT98_5593 PF13614 AAA domain NT98_5594 PF02195 ParB-like nuclease domain NT98_5594 PF17762 HTH domain found in ParB protein NT98_5595 PF06866 Protein of unknown function (DUF1256) NT98_5596 PF00924 Mechanosensitive ion channel NT98_5597 PF06107 Bacterial protein of unknown function (DUF951) NT98_5598 PF06071 Protein of unknown function (DUF933) NT98_5598 PF01926 50S ribosome-binding GTPase NT98_5599 PF01250 Ribosomal protein S6 NT98_560 PF12833 Helix-turn-helix domain NT98_560 PF06445 GyrI-like small molecule binding domain NT98_5600 PF00436 Single-strand binding protein family NT98_5601 PF01084 Ribosomal protein S18 NT98_5602 PF09991 Predicted membrane protein (DUF2232) NT98_5603 PF02272 DHHA1 domain NT98_5603 PF01368 DHH family NT98_5604 PF01281 Ribosomal protein L9, N-terminal domain NT98_5604 PF03948 Ribosomal protein L9, C-terminal domain NT98_5605 PF03796 DnaB-like helicase C terminal domain NT98_5605 PF00772 DnaB-like helicase N terminal domain NT98_5606 PF00709 Adenylosuccinate synthetase NT98_561 PF00005 ABC transporter NT98_5611 PF00486 Transcriptional regulatory protein, C terminal NT98_5611 PF00072 Response regulator receiver domain NT98_5612 PF00672 HAMP domain NT98_5612 PF13426 PAS domain NT98_5612 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_5612 PF00512 His Kinase A (phospho-acceptor) domain NT98_5613 PF07435 YycH protein NT98_5614 PF09648 YycH protein NT98_5615 PF00753 Metallo-beta-lactamase superfamily NT98_5616 PF13180 PDZ domain NT98_5618 PF02590 Predicted SPOUT methyltransferase NT98_562 PF02687 FtsX-like permease family NT98_5621 PF08439 Oligopeptidase F NT98_5621 PF01432 Peptidase family M3 NT98_5622 PF00478 IMP dehydrogenase / GMP reductase domain NT98_5624 PF03880 DbpA RNA binding domain NT98_5624 PF00270 DEAD/DEAH box helicase NT98_5624 PF00271 Helicase conserved C-terminal domain NT98_5626 PF03006 Haemolysin-III related NT98_5627 PF16363 GDP-mannose 4,6 dehydratase NT98_5629 PF02293 AmiS/UreI family transporter NT98_5631 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NT98_5631 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NT98_5632 PF02898 Nitric oxide synthase, oxygenase domain NT98_5633 PF02028 BCCT, betaine/carnitine/choline family transporter NT98_5634 PF07690 Major Facilitator Superfamily NT98_5635 PF06580 Histidine kinase NT98_5635 PF07694 5TMR of 5TMR-LYT NT98_5635 PF13492 GAF domain NT98_5635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_5636 PF04397 LytTr DNA-binding domain NT98_5636 PF00072 Response regulator receiver domain NT98_5637 PF03788 LrgA family NT98_5638 PF04172 LrgB-like family NT98_5639 PF01594 AI-2E family transporter NT98_564 PF12833 Helix-turn-helix domain NT98_564 PF02311 AraC-like ligand binding domain NT98_5640 PF01641 SelR domain NT98_5640 PF01625 Peptide methionine sulfoxide reductase NT98_5641 PF00873 AcrB/AcrD/AcrF family NT98_5642 PF00440 Bacterial regulatory proteins, tetR family NT98_5643 PF00535 Glycosyl transferase family 2 NT98_5647 PF00005 ABC transporter NT98_5647 PF12848 ABC transporter NT98_5648 PF00535 Glycosyl transferase family 2 NT98_565 PF00398 Ribosomal RNA adenine dimethylase NT98_5650 PF03061 Thioesterase superfamily NT98_5658 PF01609 Transposase DDE domain NT98_566 PF09335 SNARE associated Golgi protein NT98_5661 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NT98_5663 PF10502 Signal peptidase, peptidase S26 NT98_5666 PF00140 Sigma-70 factor, region 1.2 NT98_5666 PF04542 Sigma-70 region 2 NT98_5666 PF04545 Sigma-70, region 4 NT98_5666 PF03979 Sigma-70 factor, region 1.1 NT98_5666 PF04539 Sigma-70 region 3 NT98_5668 PF07282 Putative transposase DNA-binding domain NT98_5668 PF12323 Helix-turn-helix domain NT98_5668 PF01385 Probable transposase NT98_5682 PF00392 Bacterial regulatory proteins, gntR family NT98_5682 PF07729 FCD domain NT98_5683 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NT98_5683 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NT98_5684 PF02447 GntP family permease NT98_5685 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NT98_5685 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NT98_5695 PF00877 NlpC/P60 family NT98_5698 PF16295 Tetracyclin repressor-like, C-terminal domain NT98_5698 PF00440 Bacterial regulatory proteins, tetR family NT98_5702 PF01385 Probable transposase NT98_5702 PF07282 Putative transposase DNA-binding domain NT98_5702 PF12323 Helix-turn-helix domain NT98_5708 PF00753 Metallo-beta-lactamase superfamily NT98_5709 PF01494 FAD binding domain NT98_571 PF00781 Diacylglycerol kinase catalytic domain NT98_5720 PF11798 IMS family HHH motif NT98_5720 PF11799 impB/mucB/samB family C-terminal domain NT98_5720 PF00817 impB/mucB/samB family NT98_5724 PF01580 FtsK/SpoIIIE family NT98_5724 PF17854 FtsK alpha domain NT98_5724 PF09397 Ftsk gamma domain NT98_5734 PF02810 SEC-C motif NT98_5737 PF12169 DNA polymerase III subunits gamma and tau domain III NT98_5738 PF07282 Putative transposase DNA-binding domain NT98_5738 PF01385 Probable transposase NT98_5738 PF12323 Helix-turn-helix domain NT98_5739 PF12169 DNA polymerase III subunits gamma and tau domain III NT98_5741 PF01609 Transposase DDE domain NT98_5743 PF01609 Transposase DDE domain NT98_5744 PF01609 Transposase DDE domain NT98_5749 PF13333 Integrase core domain NT98_5749 PF00665 Integrase core domain NT98_5749 PF13276 HTH-like domain NT98_5757 PF03808 Glycosyl transferase WecB/TagA/CpsF family NT98_5762 PF03816 Cell envelope-related transcriptional attenuator domain NT98_5764 PF02706 Chain length determinant protein NT98_5764 PF13807 G-rich domain on putative tyrosine kinase NT98_5765 PF13614 AAA domain NT98_5767 PF00483 Nucleotidyl transferase NT98_5768 PF02397 Bacterial sugar transferase NT98_5769 PF08666 SAF domain NT98_5769 PF03102 NeuB family NT98_577 PF00486 Transcriptional regulatory protein, C terminal NT98_577 PF00072 Response regulator receiver domain NT98_5770 PF02350 UDP-N-acetylglucosamine 2-epimerase NT98_5771 PF02348 Cytidylyltransferase NT98_5773 PF01022 Bacterial regulatory protein, arsR family NT98_5777 PF01609 Transposase DDE domain NT98_5779 PF02638 Glycosyl hydrolase-like 10 NT98_578 PF00512 His Kinase A (phospho-acceptor) domain NT98_578 PF00672 HAMP domain NT98_578 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_5780 PF13276 HTH-like domain NT98_5780 PF00665 Integrase core domain NT98_5780 PF13333 Integrase core domain NT98_5782 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NT98_5783 PF00665 Integrase core domain NT98_5783 PF13333 Integrase core domain NT98_5784 PF05043 Mga helix-turn-helix domain NT98_5784 PF00874 PRD domain NT98_5784 PF08279 HTH domain NT98_5785 PF09385 Histidine kinase N terminal NT98_5787 PF00291 Pyridoxal-phosphate dependent enzyme NT98_5789 PF00892 EamA-like transporter family NT98_579 PF09515 Thiamine transporter protein (Thia_YuaJ) NT98_5790 PF01022 Bacterial regulatory protein, arsR family NT98_5791 PF13180 PDZ domain NT98_58 PF17676 LD-carboxypeptidase C-terminal domain NT98_58 PF02016 LD-carboxypeptidase N-terminal domain NT98_5800 PF00665 Integrase core domain NT98_5800 PF13333 Integrase core domain NT98_5808 PF02796 Helix-turn-helix domain of resolvase NT98_5808 PF00239 Resolvase, N terminal domain NT98_581 PF07670 Nucleoside recognition NT98_581 PF17910 FeoB cytosolic helical domain NT98_581 PF07664 Ferrous iron transport protein B C terminus NT98_581 PF02421 Ferrous iron transport protein B NT98_5816 PF03496 ADP-ribosyltransferase exoenzyme NT98_5816 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain NT98_5817 PF17475 Clostridial binary toxin B/anthrax toxin PA domain 2 NT98_5817 PF03495 Clostridial binary toxin B/anthrax toxin PA Ca-binding domain NT98_5817 PF17476 Clostridial binary toxin B/anthrax toxin PA domain 3 NT98_5817 PF07691 PA14 domain NT98_5818 PF13180 PDZ domain NT98_5818 PF00595 PDZ domain NT98_5821 PF00512 His Kinase A (phospho-acceptor) domain NT98_5821 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_5822 PF00486 Transcriptional regulatory protein, C terminal NT98_5822 PF00072 Response regulator receiver domain NT98_5824 PF04893 Yip1 domain NT98_5825 PF02687 FtsX-like permease family NT98_5825 PF12704 MacB-like periplasmic core domain NT98_5826 PF00005 ABC transporter NT98_5828 PF07690 Major Facilitator Superfamily NT98_5832 PF01520 N-acetylmuramoyl-L-alanine amidase NT98_5832 PF00395 S-layer homology domain NT98_5836 PF13700 Domain of unknown function (DUF4158) NT98_5836 PF01526 Tn3 transposase DDE domain NT98_5837 PF13700 Domain of unknown function (DUF4158) NT98_5837 PF01526 Tn3 transposase DDE domain NT98_584 PF04012 PspA/IM30 family NT98_5842 PF05504 Spore germination B3/ GerAC like, C-terminal NT98_5843 PF03323 Bacillus/Clostridium GerA spore germination protein NT98_5844 PF03845 Spore germination protein NT98_5845 PF00239 Resolvase, N terminal domain NT98_5845 PF02796 Helix-turn-helix domain of resolvase NT98_5846 PF13700 Domain of unknown function (DUF4158) NT98_5846 PF01526 Tn3 transposase DDE domain NT98_5847 PF00269 Small, acid-soluble spore proteins, alpha/beta type NT98_5858 PF07972 NrdI Flavodoxin like NT98_5867 PF00589 Phage integrase family NT98_589 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) NT98_589 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 NT98_5893 PF01695 IstB-like ATP binding protein NT98_59 PF09148 Domain of unknown function (DUF1934) NT98_5903 PF01385 Probable transposase NT98_5903 PF12323 Helix-turn-helix domain NT98_5903 PF07282 Putative transposase DNA-binding domain NT98_5911 PF01381 Helix-turn-helix NT98_5918 PF13614 AAA domain NT98_5921 PF13411 MerR HTH family regulatory protein NT98_5921 PF13152 Protein of unknown function (DUF3967) NT98_593 PF10676 Spore germination protein gerPA/gerPF NT98_594 PF02322 Cytochrome bd terminal oxidase subunit II NT98_5948 PF10668 Phage terminase small subunit NT98_5948 PF03592 Terminase small subunit NT98_595 PF01654 Cytochrome bd terminal oxidase subunit I NT98_596 PF01809 Putative membrane protein insertion efficiency factor NT98_597 PF00484 Carbonic anhydrase NT98_598 PF02664 S-Ribosylhomocysteinase (LuxS) NT98_6 PF03808 Glycosyl transferase WecB/TagA/CpsF family NT98_60 PF00750 tRNA synthetases class I (R) NT98_60 PF03485 Arginyl tRNA synthetase N terminal domain NT98_60 PF05746 DALR anticodon binding domain NT98_607 PF00293 NUDIX domain NT98_61 PF08281 Sigma-70, region 4 NT98_61 PF04542 Sigma-70 region 2 NT98_612 PF00528 Binding-protein-dependent transport system inner membrane component NT98_613 PF00005 ABC transporter NT98_617 PF00884 Sulfatase NT98_618 PF08386 TAP-like protein NT98_618 PF00561 alpha/beta hydrolase fold NT98_619 PF00512 His Kinase A (phospho-acceptor) domain NT98_619 PF00989 PAS fold NT98_619 PF08447 PAS fold NT98_619 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_620 PF00512 His Kinase A (phospho-acceptor) domain NT98_620 PF13188 PAS domain NT98_620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_620 PF00989 PAS fold NT98_620 PF13426 PAS domain NT98_632 PF01293 Phosphoenolpyruvate carboxykinase NT98_633 PF02772 S-adenosylmethionine synthetase, central domain NT98_633 PF00438 S-adenosylmethionine synthetase, N-terminal domain NT98_633 PF02773 S-adenosylmethionine synthetase, C-terminal domain NT98_635 PF00994 Probable molybdopterin binding domain NT98_636 PF12804 MobA-like NTP transferase domain NT98_637 PF00534 Glycosyl transferases group 1 NT98_637 PF13439 Glycosyltransferase Family 4 NT98_638 PF01569 PAP2 superfamily NT98_639 PF00132 Bacterial transferase hexapeptide (six repeats) NT98_640 PF12146 Serine aminopeptidase, S33 NT98_641 PF10776 Protein of unknown function (DUF2600) NT98_646 PF01177 Asp/Glu/Hydantoin racemase NT98_648 PF00005 ABC transporter NT98_648 PF13732 Domain of unknown function (DUF4162) NT98_649 PF06962 Putative rRNA methylase NT98_65 PF05738 Cna protein B-type domain NT98_65 PF05737 Collagen binding domain NT98_65 PF17802 Prealbumin-like fold domain NT98_650 PF04055 Radical SAM superfamily NT98_650 PF16199 Radical_SAM C-terminal domain NT98_651 PF10732 Protein of unknown function (DUF2524) NT98_653 PF04235 Protein of unknown function (DUF418) NT98_653 PF07786 Protein of unknown function (DUF1624) NT98_654 PF00005 ABC transporter NT98_656 PF00589 Phage integrase family NT98_657 PF02080 TrkA-C domain NT98_658 PF00999 Sodium/hydrogen exchanger family NT98_659 PF07690 Major Facilitator Superfamily NT98_66 PF04389 Peptidase family M28 NT98_66 PF02225 PA domain NT98_660 PF13603 Leucyl-tRNA synthetase, Domain 2 NT98_660 PF09334 tRNA synthetases class I (M) NT98_660 PF08264 Anticodon-binding domain of tRNA NT98_660 PF00133 tRNA synthetases class I (I, L, M and V) NT98_665 PF03845 Spore germination protein NT98_666 PF03323 Bacillus/Clostridium GerA spore germination protein NT98_667 PF00561 alpha/beta hydrolase fold NT98_669 PF00581 Rhodanese-like domain NT98_67 PF00557 Metallopeptidase family M24 NT98_673 PF04055 Radical SAM superfamily NT98_673 PF06463 Molybdenum Cofactor Synthesis C NT98_674 PF00899 ThiF family NT98_675 PF01967 MoaC family NT98_676 PF03453 MoeA N-terminal region (domain I and II) NT98_676 PF03454 MoeA C-terminal region (domain IV) NT98_676 PF00994 Probable molybdopterin binding domain NT98_677 PF03205 Molybdopterin guanine dinucleotide synthesis protein B NT98_678 PF02391 MoaE protein NT98_68 PF00005 ABC transporter NT98_681 PF06800 Sugar transport protein NT98_683 PF02559 CarD-like/TRCF domain NT98_685 PF10957 Sporulation protein Cse60 NT98_687 PF08327 Activator of Hsp90 ATPase homolog 1-like protein NT98_688 PF01022 Bacterial regulatory protein, arsR family NT98_689 PF07690 Major Facilitator Superfamily NT98_691 PF01943 Polysaccharide biosynthesis protein NT98_691 PF14667 Polysaccharide biosynthesis C-terminal domain NT98_692 PF00849 RNA pseudouridylate synthase NT98_692 PF01479 S4 domain NT98_693 PF08220 DeoR-like helix-turn-helix domain NT98_694 PF01546 Peptidase family M20/M25/M40 NT98_695 PF02834 LigT like Phosphoesterase NT98_696 PF17999 Pullulanase N1-terminal domain NT98_696 PF00128 Alpha amylase, catalytic domain NT98_696 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NT98_697 PF01636 Phosphotransferase enzyme family NT98_698 PF14165 YtzH-like protein NT98_699 PF02390 Putative methyltransferase NT98_7 PF07690 Major Facilitator Superfamily NT98_70 PF07730 Histidine kinase NT98_70 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_700 PF00753 Metallo-beta-lactamase superfamily NT98_702 PF05343 M42 glutamyl aminopeptidase NT98_703 PF01931 Protein of unknown function DUF84 NT98_704 PF00085 Thioredoxin NT98_705 PF07285 Protein of unknown function (DUF1444) NT98_706 PF01588 Putative tRNA binding domain NT98_706 PF14794 Domain of unknown function (DUF4479) NT98_708 PF01520 N-acetylmuramoyl-L-alanine amidase NT98_708 PF08239 Bacterial SH3 domain NT98_709 PF17854 FtsK alpha domain NT98_709 PF09397 Ftsk gamma domain NT98_709 PF01580 FtsK/SpoIIIE family NT98_71 PF00196 Bacterial regulatory proteins, luxR family NT98_71 PF00072 Response regulator receiver domain NT98_711 PF02875 Mur ligase family, glutamate ligase domain NT98_711 PF08245 Mur ligase middle domain NT98_711 PF01225 Mur ligase family, catalytic domain NT98_713 PF03551 Transcriptional regulator PadR-like family NT98_714 PF13411 MerR HTH family regulatory protein NT98_715 PF00892 EamA-like transporter family NT98_716 PF13302 Acetyltransferase (GNAT) domain NT98_720 PF02073 Thermophilic metalloprotease (M29) NT98_722 PF11009 Protein of unknown function (DUF2847) NT98_723 PF07537 CamS sex pheromone cAM373 precursor NT98_724 PF00356 Bacterial regulatory proteins, lacI family NT98_728 PF01741 Large-conductance mechanosensitive channel, MscL NT98_729 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NT98_730 PF04397 LytTr DNA-binding domain NT98_730 PF00072 Response regulator receiver domain NT98_734 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_734 PF06580 Histidine kinase NT98_736 PF00561 alpha/beta hydrolase fold NT98_737 PF00850 Histone deacetylase domain NT98_738 PF00571 CBS domain NT98_739 PF00583 Acetyltransferase (GNAT) family NT98_740 PF00501 AMP-binding enzyme NT98_740 PF13193 AMP-binding enzyme C-terminal domain NT98_741 PF12464 Maltose acetyltransferase NT98_741 PF14602 Hexapeptide repeat of succinyl-transferase NT98_745 PF00579 tRNA synthetases class I (W and Y) NT98_745 PF01479 S4 domain NT98_749 PF01479 S4 domain NT98_749 PF00163 Ribosomal protein S4/S9 N-terminal domain NT98_75 PF00563 EAL domain NT98_75 PF03707 Bacterial signalling protein N terminal repeat NT98_75 PF00990 Diguanylate cyclase, GGDEF domain NT98_750 PF01053 Cys/Met metabolism PLP-dependent enzyme NT98_751 PF13185 GAF domain NT98_752 PF00440 Bacterial regulatory proteins, tetR family NT98_753 PF00892 EamA-like transporter family NT98_754 PF03466 LysR substrate binding domain NT98_754 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NT98_755 PF06160 Septation ring formation regulator, EzrA NT98_756 PF00266 Aminotransferase class-V NT98_757 PF02568 Thiamine biosynthesis protein (ThiI) NT98_757 PF02926 THUMP domain NT98_758 PF00269 Small, acid-soluble spore proteins, alpha/beta type NT98_759 PF00501 AMP-binding enzyme NT98_759 PF13193 AMP-binding enzyme C-terminal domain NT98_76 PF03851 UV-endonuclease UvdE NT98_761 PF07969 Amidohydrolase family NT98_762 PF01513 ATP-NAD kinase NT98_764 PF09579 Sporulation protein YtfJ (Spore_YtfJ) NT98_765 PF08534 Redoxin NT98_766 PF02384 N-6 DNA Methylase NT98_767 PF00871 Acetokinase family NT98_77 PF13091 PLD-like domain NT98_770 PF12787 EcsC protein family NT98_771 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) NT98_771 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 NT98_775 PF00764 Arginosuccinate synthase NT98_776 PF00206 Lyase NT98_776 PF14698 Argininosuccinate lyase C-terminal NT98_779 PF00582 Universal stress protein family NT98_78 PF13183 4Fe-4S dicluster domain NT98_78 PF02754 Cysteine-rich domain NT98_781 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NT98_781 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NT98_783 PF01381 Helix-turn-helix NT98_785 PF07883 Cupin domain NT98_786 PF12746 GNAT acetyltransferase NT98_79 PF00108 Thiolase, N-terminal domain NT98_79 PF02803 Thiolase, C-terminal domain NT98_793 PF11518 Protein of unknown function (DUF3221) NT98_794 PF00557 Metallopeptidase family M24 NT98_794 PF01321 Creatinase/Prolidase N-terminal domain NT98_797 PF00392 Bacterial regulatory proteins, gntR family NT98_797 PF07085 DRTGG domain NT98_797 PF00571 CBS domain NT98_797 PF03061 Thioesterase superfamily NT98_799 PF01636 Phosphotransferase enzyme family NT98_8 PF04397 LytTr DNA-binding domain NT98_8 PF00072 Response regulator receiver domain NT98_80 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NT98_80 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NT98_801 PF14007 YtpI-like protein NT98_802 PF01368 DHH family NT98_802 PF02272 DHHA1 domain NT98_804 PF14034 Sporulation protein YtrH NT98_805 PF14579 Helix-hairpin-helix motif NT98_805 PF02811 PHP domain NT98_805 PF01336 OB-fold nucleic acid binding domain NT98_805 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NT98_805 PF07733 Bacterial DNA polymerase III alpha NTPase domain NT98_806 PF03949 Malic enzyme, NAD binding domain NT98_806 PF00390 Malic enzyme, N-terminal domain NT98_807 PF00392 Bacterial regulatory proteins, gntR family NT98_808 PF01039 Carboxyl transferase domain NT98_808 PF17848 Acetyl-coA carboxylase zinc finger domain NT98_809 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit NT98_81 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NT98_81 PF02770 Acyl-CoA dehydrogenase, middle domain NT98_81 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NT98_810 PF00365 Phosphofructokinase NT98_811 PF02887 Pyruvate kinase, alpha/beta domain NT98_811 PF00224 Pyruvate kinase, barrel domain NT98_811 PF00391 PEP-utilising enzyme, mobile domain NT98_812 PF04186 FxsA cytoplasmic membrane protein NT98_813 PF01594 AI-2E family transporter NT98_814 PF04284 Protein of unknown function (DUF441) NT98_815 PF00285 Citrate synthase, C-terminal domain NT98_816 PF00180 Isocitrate/isopropylmalate dehydrogenase NT98_817 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NT98_817 PF00056 lactate/malate dehydrogenase, NAD binding domain NT98_82 PF02770 Acyl-CoA dehydrogenase, middle domain NT98_82 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NT98_82 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NT98_821 PF00486 Transcriptional regulatory protein, C terminal NT98_821 PF00072 Response regulator receiver domain NT98_822 PF16736 Single Cache-like NT98_822 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_822 PF00512 His Kinase A (phospho-acceptor) domain NT98_822 PF00989 PAS fold NT98_823 PF01367 5'-3' exonuclease, C-terminal SAM fold NT98_823 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NT98_823 PF00476 DNA polymerase family A NT98_824 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NT98_824 PF06827 Zinc finger found in FPG and IleRS NT98_824 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NT98_825 PF02659 Putative manganese efflux pump NT98_826 PF01121 Dephospho-CoA kinase NT98_827 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NT98_827 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NT98_829 PF02675 S-adenosylmethionine decarboxylase NT98_830 PF03477 ATP cone domain NT98_831 PF07261 Replication initiation and membrane attachment NT98_832 PF01695 IstB-like ATP binding protein NT98_832 PF07319 Primosomal protein DnaI N-terminus NT98_833 PF08812 YtxC-like family NT98_834 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NT98_834 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NT98_834 PF02824 TGS domain NT98_834 PF03129 Anticodon binding domain NT98_835 PF00707 Translation initiation factor IF-3, C-terminal domain NT98_835 PF05198 Translation initiation factor IF-3, N-terminal domain NT98_836 PF01632 Ribosomal protein L35 NT98_837 PF00453 Ribosomal protein L20 NT98_839 PF05343 M42 glutamyl aminopeptidase NT98_84 PF05066 HB1, ASXL, restriction endonuclease HTH domain NT98_840 PF00440 Bacterial regulatory proteins, tetR family NT98_840 PF16859 Tetracyclin repressor-like, C-terminal domain NT98_842 PF07690 Major Facilitator Superfamily NT98_844 PF01966 HD domain NT98_845 PF14098 Small, acid-soluble spore protein I NT98_846 PF00588 SpoU rRNA Methylase family NT98_846 PF08032 RNA 2'-O ribose methyltransferase substrate binding NT98_847 PF01409 tRNA synthetases class II core domain (F) NT98_847 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NT98_848 PF03484 tRNA synthetase B5 domain NT98_848 PF03147 Ferredoxin-fold anticodon binding domain NT98_848 PF01588 Putative tRNA binding domain NT98_848 PF03483 B3/4 domain NT98_848 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NT98_849 PF01336 OB-fold nucleic acid binding domain NT98_849 PF00152 tRNA synthetases class II (D, K and N) NT98_85 PF06418 CTP synthase N-terminus NT98_85 PF00117 Glutamine amidotransferase class-I NT98_852 PF01351 Ribonuclease HII NT98_852 PF11858 Domain of unknown function (DUF3378) NT98_853 PF05164 Cell division protein ZapA NT98_854 PF02674 Colicin V production protein NT98_855 PF02811 PHP domain NT98_855 PF14716 Helix-hairpin-helix domain NT98_855 PF14791 DNA polymerase beta thumb NT98_856 PF00488 MutS domain V NT98_856 PF01713 Smr domain NT98_858 PF01479 S4 domain NT98_858 PF00849 RNA pseudouridylate synthase NT98_859 PF05525 Branched-chain amino acid transport protein NT98_86 PF10740 Domain of unknown function (DUF2529) NT98_860 PF05031 Iron Transport-associated domain NT98_862 PF05031 Iron Transport-associated domain NT98_863 PF01497 Periplasmic binding protein NT98_864 PF01032 FecCD transport family NT98_865 PF00005 ABC transporter NT98_866 PF04203 Sortase domain NT98_867 PF03992 Antibiotic biosynthesis monooxygenase NT98_868 PF17785 PUA-like domain NT98_868 PF10672 S-adenosylmethionine-dependent methyltransferase NT98_869 PF09962 Uncharacterized conserved protein (DUF2196) NT98_87 PF00072 Response regulator receiver domain NT98_871 PF00072 Response regulator receiver domain NT98_871 PF00486 Transcriptional regulatory protein, C terminal NT98_872 PF00512 His Kinase A (phospho-acceptor) domain NT98_872 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_873 PF00005 ABC transporter NT98_879 PF05163 DinB family NT98_88 PF01116 Fructose-bisphosphate aldolase class-II NT98_881 PF13193 AMP-binding enzyme C-terminal domain NT98_881 PF00501 AMP-binding enzyme NT98_882 PF08359 YsiA-like protein, C-terminal region NT98_882 PF00440 Bacterial regulatory proteins, tetR family NT98_883 PF00378 Enoyl-CoA hydratase/isomerase NT98_884 PF01012 Electron transfer flavoprotein domain NT98_885 PF00766 Electron transfer flavoprotein FAD-binding domain NT98_885 PF01012 Electron transfer flavoprotein domain NT98_886 PF00085 Thioredoxin NT98_887 PF08459 UvrC Helix-hairpin-helix N-terminal NT98_887 PF02151 UvrB/uvrC motif NT98_887 PF01541 GIY-YIG catalytic domain NT98_888 PF10702 Protein of unknown function (DUF2507) NT98_889 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NT98_89 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NT98_890 PF00890 FAD binding domain NT98_890 PF02910 Fumarate reductase flavoprotein C-term NT98_891 PF13085 2Fe-2S iron-sulfur cluster binding domain NT98_891 PF13183 4Fe-4S dicluster domain NT98_892 PF03061 Thioesterase superfamily NT98_893 PF02557 D-alanyl-D-alanine carboxypeptidase NT98_895 PF01618 MotA/TolQ/ExbB proton channel family NT98_896 PF00691 OmpA family NT98_896 PF13677 Membrane MotB of proton-channel complex MotA/MotB NT98_897 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) NT98_898 PF13732 Domain of unknown function (DUF4162) NT98_898 PF00005 ABC transporter NT98_9 PF13722 5TM C-terminal transporter carbon starvation CstA NT98_9 PF02554 Carbon starvation protein CstA NT98_90 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded NT98_900 PF02082 Transcriptional regulator NT98_901 PF00230 Major intrinsic protein NT98_902 PF13536 Putative multidrug resistance efflux transporter NT98_903 PF07883 Cupin domain NT98_903 PF01381 Helix-turn-helix NT98_904 PF04024 PspC domain NT98_905 PF07969 Amidohydrolase family NT98_906 PF00860 Permease family NT98_907 PF00196 Bacterial regulatory proteins, luxR family NT98_91 PF07497 Rho termination factor, RNA-binding domain NT98_91 PF07498 Rho termination factor, N-terminal domain NT98_91 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NT98_92 PF01197 Ribosomal protein L31 NT98_93 PF00265 Thymidine kinase NT98_932 PF00929 Exonuclease NT98_932 PF07733 Bacterial DNA polymerase III alpha NTPase domain NT98_932 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NT98_932 PF11490 DNA polymerase III polC-type N-terminus II NT98_932 PF14579 Helix-hairpin-helix motif NT98_932 PF02811 PHP domain NT98_94 PF00472 RF-1 domain NT98_94 PF03462 PCRF domain NT98_941 PF00440 Bacterial regulatory proteins, tetR family NT98_943 PF07690 Major Facilitator Superfamily NT98_944 PF01177 Asp/Glu/Hydantoin racemase NT98_945 PF10646 Sporulation and spore germination NT98_946 PF01138 3' exoribonuclease family, domain 1 NT98_946 PF03725 3' exoribonuclease family, domain 2 NT98_947 PF01725 Ham1 family NT98_948 PF12850 Calcineurin-like phosphoesterase superfamily domain NT98_95 PF13847 Methyltransferase domain NT98_95 PF17827 PrmC N-terminal domain NT98_952 PF11724 YvbH-like oligomerisation region NT98_952 PF08000 Bacterial PH domain NT98_956 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NT98_956 PF05698 Bacterial trigger factor protein (TF) C-terminus NT98_956 PF05697 Bacterial trigger factor protein (TF) NT98_957 PF10431 C-terminal, D2-small domain, of ClpB protein NT98_957 PF07724 AAA domain (Cdc48 subfamily) NT98_957 PF06689 ClpX C4-type zinc finger NT98_958 PF00004 ATPase family associated with various cellular activities (AAA) NT98_958 PF05362 Lon protease (S16) C-terminal proteolytic domain NT98_959 PF02190 ATP-dependent protease La (LON) substrate-binding domain NT98_959 PF05362 Lon protease (S16) C-terminal proteolytic domain NT98_959 PF00004 ATPase family associated with various cellular activities (AAA) NT98_96 PF09551 Stage II sporulation protein R (spore_II_R) NT98_960 PF01926 50S ribosome-binding GTPase NT98_961 PF02566 OsmC-like protein NT98_962 PF01047 MarR family NT98_963 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NT98_963 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NT98_963 PF01488 Shikimate / quinate 5-dehydrogenase NT98_964 PF01578 Cytochrome C assembly protein NT98_965 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NT98_965 PF03900 Porphobilinogen deaminase, C-terminal domain NT98_966 PF02602 Uroporphyrinogen-III synthase HemD NT98_967 PF00490 Delta-aminolevulinic acid dehydratase NT98_968 PF00202 Aminotransferase class-III NT98_969 PF01476 LysM domain NT98_971 PF00133 tRNA synthetases class I (I, L, M and V) NT98_971 PF08264 Anticodon-binding domain of tRNA NT98_971 PF10458 Valyl tRNA synthetase tRNA binding arm NT98_972 PF08245 Mur ligase middle domain NT98_972 PF02875 Mur ligase family, glutamate ligase domain NT98_974 PF02545 Maf-like protein NT98_975 PF04002 RadC-like JAB domain NT98_977 PF04085 rod shape-determining protein MreC NT98_979 PF03775 Septum formation inhibitor MinC, C-terminal domain NT98_98 PF03481 Putative GTP-binding controlling metal-binding NT98_98 PF01300 Telomere recombination NT98_980 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NT98_981 PF01551 Peptidase family M23 NT98_982 PF02163 Peptidase family M50 NT98_983 PF00575 S1 RNA binding domain NT98_983 PF10150 Ribonuclease E/G family NT98_984 PF00829 Ribosomal prokaryotic L21 protein NT98_985 PF04327 Cysteine protease Prp NT98_986 PF01016 Ribosomal L27 protein NT98_987 PF14682 Sporulation initiation phospho-transferase B, C-terminal NT98_987 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NT98_988 PF09269 Domain of unknown function (DUF1967) NT98_988 PF01926 50S ribosome-binding GTPase NT98_988 PF01018 GTP1/OBG NT98_989 PF00072 Response regulator receiver domain NT98_989 PF00486 Transcriptional regulatory protein, C terminal NT98_99 PF02659 Putative manganese efflux pump NT98_990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NT98_991 PF00005 ABC transporter NT98_992 PF02687 FtsX-like permease family NT98_993 PF02687 FtsX-like permease family NT98_994 PF00800 Prephenate dehydratase NT98_994 PF01842 ACT domain NT98_995 PF03475 3-alpha domain NT98_995 PF03473 MOSC domain NT98_996 PF02829 3H domain NT98_996 PF08279 HTH domain NT98_997 PF00266 Aminotransferase class-V NT98_998 PF00890 FAD binding domain NT98_998 PF02910 Fumarate reductase flavoprotein C-term NT98_999 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NT98_999 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain