BG11_1009 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG11_1013 SM00871 Bacterial transcription activator, effector binding domain BG11_1017 SM00642 Alpha-amylase domain BG11_103 SM00382 ATPases associated with a variety of cellular activities BG11_1038 SM00465 GIY-YIG type nucleases (URI domain) BG11_1059 SM00480 DNA polymerase III beta subunit BG11_1072 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG11_1080 SM00422 helix_turn_helix, mercury resistance BG11_1092 SM00740 BG11_1092 BG11_1093 SM00014 Acid phosphatase homologues BG11_1094 SM00829 Enoylreductase BG11_1097 SM00387 Histidine kinase-like ATPases BG11_1097 SM00388 His Kinase A (phosphoacceptor) domain BG11_1100 SM00382 ATPases associated with a variety of cellular activities BG11_1105 SM00091 PAS domain BG11_1105 SM00387 Histidine kinase-like ATPases BG11_1105 SM00388 His Kinase A (phosphoacceptor) domain BG11_1122 SM00644 BG11_1122 BG11_1140 SM00507 HNH nucleases BG11_1164 SM00382 ATPases associated with a variety of cellular activities BG11_1169 SM00530 Helix-turn-helix XRE-family like proteins BG11_1170 SM00530 Helix-turn-helix XRE-family like proteins BG11_1183 SM01209 BG11_1183 BG11_1184 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG11_1190 SM00382 ATPases associated with a variety of cellular activities BG11_1193 SM00382 ATPases associated with a variety of cellular activities BG11_1195 SM00387 Histidine kinase-like ATPases BG11_1196 SM00448 cheY-homologous receiver domain BG11_1196 SM00862 Transcriptional regulatory protein, C terminal BG11_1208 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG11_121 SM01058 CarD-like/TRCF domain BG11_1211 SM00342 helix_turn_helix, arabinose operon control protein BG11_1217 SM00422 helix_turn_helix, mercury resistance BG11_1217 SM00871 Bacterial transcription activator, effector binding domain BG11_1231 SM00448 cheY-homologous receiver domain BG11_1231 SM00862 Transcriptional regulatory protein, C terminal BG11_1232 SM00387 Histidine kinase-like ATPases BG11_1232 SM00388 His Kinase A (phosphoacceptor) domain BG11_1244 SM00878 Biotin carboxylase C-terminal domain BG11_1250 SM00382 ATPases associated with a variety of cellular activities BG11_1253 SM00450 Rhodanese Homology Domain BG11_1253 SM00849 Metallo-beta-lactamase superfamily BG11_1256 SM00052 Putative diguanylate phosphodiesterase BG11_1256 SM00091 PAS domain BG11_1256 SM00267 diguanylate cyclase BG11_1257 SM00382 ATPases associated with a variety of cellular activities BG11_1260 SM00646 BG11_1260 BG11_1265 SM00530 Helix-turn-helix XRE-family like proteins BG11_127 SM00091 PAS domain BG11_127 SM00387 Histidine kinase-like ATPases BG11_127 SM00388 His Kinase A (phosphoacceptor) domain BG11_1279 SM00354 helix_turn _helix lactose operon repressor BG11_1280 SM00014 Acid phosphatase homologues BG11_1294 SM00855 Phosphoglycerate mutase family BG11_1295 SM00347 helix_turn_helix multiple antibiotic resistance protein BG11_13 SM00257 Lysin motif BG11_130 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BG11_1300 SM00382 ATPases associated with a variety of cellular activities BG11_1306 SM00487 DEAD-like helicases superfamily BG11_1306 SM00490 helicase superfamily c-terminal domain BG11_1309 SM00849 Metallo-beta-lactamase superfamily BG11_131 SM00644 BG11_131 BG11_131 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. BG11_1315 SM01207 BG11_1315 BG11_1329 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG11_1330 SM00835 Cupin BG11_1336 SM00530 Helix-turn-helix XRE-family like proteins BG11_1338 SM00646 BG11_1338 BG11_1340 SM00382 ATPases associated with a variety of cellular activities BG11_1341 SM00382 ATPases associated with a variety of cellular activities BG11_1348 SM00859 Semialdehyde dehydrogenase, NAD binding domain BG11_1360 SM00357 Cold shock protein domain BG11_1368 SM00530 Helix-turn-helix XRE-family like proteins BG11_1373 SM01059 Chloramphenicol acetyltransferase BG11_1377 SM00849 Metallo-beta-lactamase superfamily BG11_1383 SM00849 Metallo-beta-lactamase superfamily BG11_1390 SM00382 ATPases associated with a variety of cellular activities BG11_1391 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BG11_1392 SM00363 S4 RNA-binding domain BG11_1400 SM00411 bacterial (prokaryotic) histone like domain BG11_1404 SM00923 MbtH-like protein BG11_1405 SM00823 Phosphopantetheine attachment site BG11_1405 SM00824 Thioesterase BG11_1412 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG11_1440 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. BG11_145 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BG11_1451 SM00530 Helix-turn-helix XRE-family like proteins BG11_1457 SM00860 SMI1 / KNR4 family BG11_1459 SM00014 Acid phosphatase homologues BG11_1462 SM00219 Tyrosine kinase, catalytic domain BG11_1470 SM00382 ATPases associated with a variety of cellular activities BG11_1473 SM00882 Coenzyme A transferase BG11_1474 SM00882 Coenzyme A transferase BG11_1477 SM00387 Histidine kinase-like ATPases BG11_1477 SM00388 His Kinase A (phosphoacceptor) domain BG11_1480 SM01091 Transporter associated domain BG11_1488 SM00382 ATPases associated with a variety of cellular activities BG11_15 SM00148 Phospholipase C, catalytic domain (part); domain X BG11_1500 SM00829 Enoylreductase BG11_1503 SM00421 helix_turn_helix, Lux Regulon BG11_1503 SM00448 cheY-homologous receiver domain BG11_1504 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BG11_1526 SM00563 Phosphate acyltransferases BG11_1537 SM00382 ATPases associated with a variety of cellular activities BG11_154 SM00382 ATPases associated with a variety of cellular activities BG11_1552 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG11_1552 SM00387 Histidine kinase-like ATPases BG11_1552 SM00388 His Kinase A (phosphoacceptor) domain BG11_1553 SM00448 cheY-homologous receiver domain BG11_1553 SM00862 Transcriptional regulatory protein, C terminal BG11_1564 SM00028 Tetratricopeptide repeats BG11_1566 SM00382 ATPases associated with a variety of cellular activities BG11_1569 SM00327 von Willebrand factor (vWF) type A domain BG11_157 SM00479 BG11_157 BG11_1575 SM00028 Tetratricopeptide repeats BG11_1578 SM00836 DALR anticodon binding domain BG11_1578 SM01016 Arginyl tRNA synthetase N terminal dom BG11_1579 SM00507 HNH nucleases BG11_1583 SM00567 E-Z type HEAT repeats BG11_1583 SM00932 Scaffold protein Nfu/NifU N terminal BG11_1588 SM00382 ATPases associated with a variety of cellular activities BG11_1589 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG11_1598 SM00894 Excalibur calcium-binding domain BG11_161 SM00257 Lysin motif BG11_161 SM00636 BG11_161 BG11_1610 SM00852 Probable molybdopterin binding domain BG11_1612 SM00729 Elongator protein 3, MiaB family, Radical SAM BG11_1613 SM00100 Cyclic nucleotide-monophosphate binding domain BG11_1613 SM00419 helix_turn_helix, cAMP Regulatory protein BG11_1626 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BG11_1629 SM00460 Transglutaminase/protease-like homologues BG11_1632 SM00849 Metallo-beta-lactamase superfamily BG11_1637 SM00829 Enoylreductase BG11_164 SM01207 BG11_164 BG11_1641 SM00487 DEAD-like helicases superfamily BG11_1641 SM00490 helicase superfamily c-terminal domain BG11_1669 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG11_167 SM00448 cheY-homologous receiver domain BG11_167 SM00862 Transcriptional regulatory protein, C terminal BG11_1675 SM01005 Alanine racemase, C-terminal domain BG11_1678 SM00855 Phosphoglycerate mutase family BG11_1679 SM00244 prohibitin homologues BG11_168 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BG11_169 SM00881 CoA binding domain BG11_1694 SM01091 Transporter associated domain BG11_1699 SM00155 Phospholipase D. Active site motifs. BG11_170 SM00387 Histidine kinase-like ATPases BG11_170 SM00433 TopoisomeraseII BG11_1709 SM00855 Phosphoglycerate mutase family BG11_171 SM00434 DNA Topoisomerase IV BG11_1730 SM00833 Cobalamin synthesis protein cobW C-terminal domain BG11_174 SM00382 ATPases associated with a variety of cellular activities BG11_1742 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG11_1742 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG11_1749 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG11_1751 SM00966 SpoVT / AbrB like domain BG11_1756 SM00460 Transglutaminase/protease-like homologues BG11_1774 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG11_1774 SM00387 Histidine kinase-like ATPases BG11_1774 SM00388 His Kinase A (phosphoacceptor) domain BG11_1775 SM00448 cheY-homologous receiver domain BG11_1775 SM00862 Transcriptional regulatory protein, C terminal BG11_1790 SM00387 Histidine kinase-like ATPases BG11_1790 SM00388 His Kinase A (phosphoacceptor) domain BG11_1791 SM00448 cheY-homologous receiver domain BG11_1791 SM00862 Transcriptional regulatory protein, C terminal BG11_1792 SM00382 ATPases associated with a variety of cellular activities BG11_1794 SM00287 Bacterial SH3 domain homologues BG11_1800 SM00382 ATPases associated with a variety of cellular activities BG11_1801 SM00382 ATPases associated with a variety of cellular activities BG11_1805 SM00347 helix_turn_helix multiple antibiotic resistance protein BG11_1812 SM00382 ATPases associated with a variety of cellular activities BG11_1813 SM00382 ATPases associated with a variety of cellular activities BG11_1820 SM00833 Cobalamin synthesis protein cobW C-terminal domain BG11_1839 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BG11_1839 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BG11_1839 SM00493 BG11_1839 BG11_1841 SM00287 Bacterial SH3 domain homologues BG11_1843 SM01011 Aminopeptidase P, N-terminal domain BG11_1849 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BG11_1851 SM01133 BG11_1851 BG11_1861 SM00450 Rhodanese Homology Domain BG11_1864 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG11_1864 SM00387 Histidine kinase-like ATPases BG11_1864 SM00388 His Kinase A (phosphoacceptor) domain BG11_1865 SM00448 cheY-homologous receiver domain BG11_1865 SM00862 Transcriptional regulatory protein, C terminal BG11_1867 SM00729 Elongator protein 3, MiaB family, Radical SAM BG11_1876 SM00850 LytTr DNA-binding domain BG11_1882 SM00854 Bacterial capsule synthesis protein PGA_cap BG11_19 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG11_1914 SM00047 Lysozyme subfamily 2 BG11_1915 SM00646 BG11_1915 BG11_1926 SM00487 DEAD-like helicases superfamily BG11_1926 SM00490 helicase superfamily c-terminal domain BG11_1927 SM00448 cheY-homologous receiver domain BG11_1928 SM00387 Histidine kinase-like ATPases BG11_1929 SM00919 Malic enzyme, NAD binding domain BG11_1929 SM01274 BG11_1929 BG11_1933 SM00155 Phospholipase D. Active site motifs. BG11_1936 SM00382 ATPases associated with a variety of cellular activities BG11_1938 SM00421 helix_turn_helix, Lux Regulon BG11_1938 SM00448 cheY-homologous receiver domain BG11_1946 SM00530 Helix-turn-helix XRE-family like proteins BG11_1960 SM00422 helix_turn_helix, mercury resistance BG11_1965 SM00833 Cobalamin synthesis protein cobW C-terminal domain BG11_1967 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG11_1967 SM00895 BG11_1967 BG11_1975 SM00347 helix_turn_helix multiple antibiotic resistance protein BG11_1979 SM00855 Phosphoglycerate mutase family BG11_198 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BG11_198 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BG11_1982 SM00835 Cupin BG11_1986 SM00849 Metallo-beta-lactamase superfamily BG11_1986 SM01027 Beta-Casp domain BG11_1989 SM00382 ATPases associated with a variety of cellular activities BG11_1993 SM00530 Helix-turn-helix XRE-family like proteins BG11_2002 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BG11_2004 SM00382 ATPases associated with a variety of cellular activities BG11_2004 SM00962 SRP54-type protein, GTPase domain BG11_2018 SM00260 Two component signalling adaptor domain BG11_2018 SM00448 cheY-homologous receiver domain BG11_202 SM00729 Elongator protein 3, MiaB family, Radical SAM BG11_2025 SM00382 ATPases associated with a variety of cellular activities BG11_2040 SM00138 Methyltransferase, chemotaxis proteins BG11_2044 SM00073 Histidine Phosphotransfer domain BG11_2044 SM00260 Two component signalling adaptor domain BG11_2044 SM00387 Histidine kinase-like ATPases BG11_2044 SM01231 BG11_2044 BG11_2045 SM00448 cheY-homologous receiver domain BG11_205 SM00852 Probable molybdopterin binding domain BG11_2063 SM00422 helix_turn_helix, mercury resistance BG11_2063 SM00871 Bacterial transcription activator, effector binding domain BG11_2064 SM00849 Metallo-beta-lactamase superfamily BG11_2074 SM00357 Cold shock protein domain BG11_2096 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BG11_2096 SM00475 5'-3' exonuclease BG11_2102 SM00450 Rhodanese Homology Domain BG11_2115 SM00491 BG11_2115 BG11_2117 SM00981 BG11_2117 BG11_2128 SM00060 Fibronectin type 3 domain BG11_2130 SM00478 endonuclease III BG11_2130 SM00525 BG11_2130 BG11_2135 SM00479 BG11_2135 BG11_2135 SM00491 BG11_2135 BG11_2144 SM00851 MGS-like domain BG11_2148 SM00986 Uracil DNA glycosylase superfamily BG11_2148 SM00987 UreE urease accessory protein, C-terminal domain BG11_2157 SM00914 BG11_2157 BG11_2158 SM00028 Tetratricopeptide repeats BG11_2162 SM00562 BG11_2162 BG11_2167 SM00411 bacterial (prokaryotic) histone like domain BG11_2178 SM01240 BG11_2178 BG11_2179 SM00316 Ribosomal protein S1-like RNA-binding domain BG11_2182 SM00870 BG11_2182 BG11_2184 SM00644 BG11_2184 BG11_2187 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BG11_2189 SM00422 helix_turn_helix, mercury resistance BG11_2191 SM00257 Lysin motif BG11_2193 SM00487 DEAD-like helicases superfamily BG11_2193 SM00490 helicase superfamily c-terminal domain BG11_2198 SM00257 Lysin motif BG11_2200 SM00091 PAS domain BG11_2200 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG11_2200 SM00387 Histidine kinase-like ATPases BG11_2200 SM00388 His Kinase A (phosphoacceptor) domain BG11_2201 SM00448 cheY-homologous receiver domain BG11_2201 SM00862 Transcriptional regulatory protein, C terminal BG11_2205 SM00363 S4 RNA-binding domain BG11_2216 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG11_2216 SM00387 Histidine kinase-like ATPases BG11_2216 SM00388 His Kinase A (phosphoacceptor) domain BG11_2220 SM00091 PAS domain BG11_2220 SM00387 Histidine kinase-like ATPases BG11_2220 SM00388 His Kinase A (phosphoacceptor) domain BG11_2238 SM00421 helix_turn_helix, Lux Regulon BG11_2238 SM00448 cheY-homologous receiver domain BG11_2239 SM00387 Histidine kinase-like ATPases BG11_225 SM01022 BG11_225 BG11_2275 SM01329 BG11_2275 BG11_2276 SM00917 LeuA allosteric (dimerisation) domain BG11_2289 SM00347 helix_turn_helix multiple antibiotic resistance protein BG11_230 SM00357 Cold shock protein domain BG11_231 SM00479 BG11_231 BG11_2313 SM00344 helix_turn_helix ASNC type BG11_2317 SM00382 ATPases associated with a variety of cellular activities BG11_2319 SM00382 ATPases associated with a variety of cellular activities BG11_2320 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG11_2323 SM00465 GIY-YIG type nucleases (URI domain) BG11_2323 SM00496 Intron-encoded nuclease repeat 2 BG11_2336 SM00387 Histidine kinase-like ATPases BG11_2336 SM00388 His Kinase A (phosphoacceptor) domain BG11_2340 SM00347 helix_turn_helix multiple antibiotic resistance protein BG11_2341 SM00387 Histidine kinase-like ATPases BG11_2341 SM00388 His Kinase A (phosphoacceptor) domain BG11_2345 SM01007 Class II Aldolase and Adducin N-terminal domain BG11_2346 SM00365 Leucine-rich repeat, SDS22-like subfamily BG11_2346 SM00369 Leucine-rich repeats, typical (most populated) subfamily BG11_2346 SM00725 NEAr Transporter domain BG11_2348 SM00420 helix_turn_helix, Deoxyribose operon repressor BG11_2348 SM01134 BG11_2348 BG11_2353 SM00382 ATPases associated with a variety of cellular activities BG11_2360 SM00822 BG11_2360 BG11_2374 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG11_2374 SM00895 BG11_2374 BG11_2375 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG11_2375 SM00387 Histidine kinase-like ATPases BG11_2375 SM00388 His Kinase A (phosphoacceptor) domain BG11_2376 SM00448 cheY-homologous receiver domain BG11_2376 SM00862 Transcriptional regulatory protein, C terminal BG11_2386 SM00014 Acid phosphatase homologues BG11_2390 SM00382 ATPases associated with a variety of cellular activities BG11_2393 SM00530 Helix-turn-helix XRE-family like proteins BG11_24 SM00052 Putative diguanylate phosphodiesterase BG11_24 SM00091 PAS domain BG11_24 SM00267 diguanylate cyclase BG11_241 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BG11_2411 SM00507 HNH nucleases BG11_2420 SM01040 BRO family, N-terminal domain BG11_2424 SM00497 Intron encoded nuclease repeat motif BG11_2434 SM00530 Helix-turn-helix XRE-family like proteins BG11_2435 SM00861 Transketolase, pyrimidine binding domain BG11_2459 SM00635 Bacterial Ig-like domain 2 BG11_2489 SM00954 Region found in RelA / SpoT proteins BG11_2491 SM01118 BG11_2491 BG11_2497 SM00155 Phospholipase D. Active site motifs. BG11_2504 SM00382 ATPases associated with a variety of cellular activities BG11_2505 SM00382 ATPases associated with a variety of cellular activities BG11_2513 SM00825 Beta-ketoacyl synthase BG11_2519 SM00382 ATPases associated with a variety of cellular activities BG11_2519 SM01086 C-terminal, D2-small domain, of ClpB protein BG11_2528 SM00316 Ribosomal protein S1-like RNA-binding domain BG11_2530 SM00530 Helix-turn-helix XRE-family like proteins BG11_2531 SM00642 Alpha-amylase domain BG11_2533 SM01060 BG11_2533 BG11_2558 SM00357 Cold shock protein domain BG11_256 SM00028 Tetratricopeptide repeats BG11_2571 SM00448 cheY-homologous receiver domain BG11_2571 SM00862 Transcriptional regulatory protein, C terminal BG11_2572 SM00387 Histidine kinase-like ATPases BG11_2572 SM00388 His Kinase A (phosphoacceptor) domain BG11_2575 SM00342 helix_turn_helix, arabinose operon control protein BG11_2575 SM00871 Bacterial transcription activator, effector binding domain BG11_2578 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG11_258 SM00829 Enoylreductase BG11_259 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG11_2592 SM00725 NEAr Transporter domain BG11_2598 SM00382 ATPases associated with a variety of cellular activities BG11_2603 SM00849 Metallo-beta-lactamase superfamily BG11_2605 SM00354 helix_turn _helix lactose operon repressor BG11_2627 SM00422 helix_turn_helix, mercury resistance BG11_2648 SM00382 ATPases associated with a variety of cellular activities BG11_2651 SM00347 helix_turn_helix multiple antibiotic resistance protein BG11_2660 SM00347 helix_turn_helix multiple antibiotic resistance protein BG11_2671 SM00530 Helix-turn-helix XRE-family like proteins BG11_2676 SM00028 Tetratricopeptide repeats BG11_2684 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG11_2692 SM00829 Enoylreductase BG11_2700 SM00387 Histidine kinase-like ATPases BG11_2700 SM00388 His Kinase A (phosphoacceptor) domain BG11_2700 SM00448 cheY-homologous receiver domain BG11_2701 SM00138 Methyltransferase, chemotaxis proteins BG11_2702 SM00331 Sigma factor PP2C-like phosphatases BG11_2702 SM00448 cheY-homologous receiver domain BG11_2715 SM00460 Transglutaminase/protease-like homologues BG11_2719 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG11_272 SM00642 Alpha-amylase domain BG11_2721 SM01120 BG11_2721 BG11_2730 SM00347 helix_turn_helix multiple antibiotic resistance protein BG11_274 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BG11_274 SM00534 ATPase domain of DNA mismatch repair MUTS family BG11_2754 SM00487 DEAD-like helicases superfamily BG11_2759 SM00487 DEAD-like helicases superfamily BG11_2759 SM00490 helicase superfamily c-terminal domain BG11_276 SM00855 Phosphoglycerate mutase family BG11_2762 SM00448 cheY-homologous receiver domain BG11_2763 SM00091 PAS domain BG11_2763 SM00387 Histidine kinase-like ATPases BG11_2767 SM00382 ATPases associated with a variety of cellular activities BG11_2768 SM00382 ATPases associated with a variety of cellular activities BG11_277 SM00829 Enoylreductase BG11_2780 SM00646 BG11_2780 BG11_2795 SM00957 SecA DEAD-like domain BG11_2795 SM00958 SecA preprotein cross-linking domain BG11_2802 SM00729 Elongator protein 3, MiaB family, Radical SAM BG11_2803 SM00644 BG11_2803 BG11_2817 SM00382 ATPases associated with a variety of cellular activities BG11_2819 SM00062 Bacterial periplasmic substrate-binding proteins BG11_2819 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BG11_2820 SM00382 ATPases associated with a variety of cellular activities BG11_2821 SM00382 ATPases associated with a variety of cellular activities BG11_2827 SM01060 BG11_2827 BG11_2841 SM00344 helix_turn_helix ASNC type BG11_2861 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen BG11_2872 SM00382 ATPases associated with a variety of cellular activities BG11_2874 SM00287 Bacterial SH3 domain homologues BG11_2884 SM00829 Enoylreductase BG11_2889 SM00450 Rhodanese Homology Domain BG11_2890 SM00450 Rhodanese Homology Domain BG11_2892 SM00450 Rhodanese Homology Domain BG11_2892 SM00849 Metallo-beta-lactamase superfamily BG11_2893 SM00450 Rhodanese Homology Domain BG11_2895 SM00450 Rhodanese Homology Domain BG11_2916 SM00347 helix_turn_helix multiple antibiotic resistance protein BG11_2933 SM00382 ATPases associated with a variety of cellular activities BG11_2935 SM00287 Bacterial SH3 domain homologues BG11_2938 SM00116 Domain in cystathionine beta-synthase and other proteins. BG11_2967 SM00899 BG11_2967 BG11_2985 SM00530 Helix-turn-helix XRE-family like proteins BG11_2994 SM00530 Helix-turn-helix XRE-family like proteins BG11_2996 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG11_3 SM00729 Elongator protein 3, MiaB family, Radical SAM BG11_3003 SM00770 Zinc dependent phospholipase C (alpha toxin) BG11_3005 SM00829 Enoylreductase BG11_301 SM00829 Enoylreductase BG11_3011 SM00382 ATPases associated with a variety of cellular activities BG11_3014 SM00354 helix_turn _helix lactose operon repressor BG11_3016 SM00347 helix_turn_helix multiple antibiotic resistance protein BG11_3018 SM00382 ATPases associated with a variety of cellular activities BG11_3019 SM00382 ATPases associated with a variety of cellular activities BG11_302 SM00849 Metallo-beta-lactamase superfamily BG11_3027 SM00448 cheY-homologous receiver domain BG11_3027 SM00862 Transcriptional regulatory protein, C terminal BG11_3028 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG11_3028 SM00387 Histidine kinase-like ATPases BG11_3028 SM00388 His Kinase A (phosphoacceptor) domain BG11_3038 SM00062 Bacterial periplasmic substrate-binding proteins BG11_3038 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BG11_3039 SM00382 ATPases associated with a variety of cellular activities BG11_3046 SM00642 Alpha-amylase domain BG11_3048 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG11_3048 SM00866 BG11_3048 BG11_3050 SM00052 Putative diguanylate phosphodiesterase BG11_3050 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BG11_3050 SM00091 PAS domain BG11_3050 SM00267 diguanylate cyclase BG11_3053 SM00155 Phospholipase D. Active site motifs. BG11_3054 SM00382 ATPases associated with a variety of cellular activities BG11_3055 SM00327 von Willebrand factor (vWF) type A domain BG11_3059 SM00382 ATPases associated with a variety of cellular activities BG11_3065 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG11_3068 SM01091 Transporter associated domain BG11_3078 SM00028 Tetratricopeptide repeats BG11_3078 SM00530 Helix-turn-helix XRE-family like proteins BG11_3081 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG11_3083 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BG11_3083 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BG11_3087 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BG11_3087 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BG11_3091 SM00448 cheY-homologous receiver domain BG11_3091 SM00862 Transcriptional regulatory protein, C terminal BG11_3092 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG11_3092 SM00387 Histidine kinase-like ATPases BG11_3092 SM00388 His Kinase A (phosphoacceptor) domain BG11_3094 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG11_3097 SM00919 Malic enzyme, NAD binding domain BG11_3097 SM01274 BG11_3097 BG11_3099 SM00448 cheY-homologous receiver domain BG11_31 SM00478 endonuclease III BG11_3100 SM00387 Histidine kinase-like ATPases BG11_3101 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG11_3101 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG11_3104 SM00387 Histidine kinase-like ATPases BG11_3104 SM00388 His Kinase A (phosphoacceptor) domain BG11_3105 SM00448 cheY-homologous receiver domain BG11_3105 SM00862 Transcriptional regulatory protein, C terminal BG11_3110 SM00382 ATPases associated with a variety of cellular activities BG11_3112 SM00248 ankyrin repeats BG11_3116 SM00448 cheY-homologous receiver domain BG11_3117 SM00091 PAS domain BG11_3117 SM00387 Histidine kinase-like ATPases BG11_3118 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG11_3118 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG11_3119 SM00244 prohibitin homologues BG11_3121 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BG11_3125 SM00365 Leucine-rich repeat, SDS22-like subfamily BG11_3125 SM00369 Leucine-rich repeats, typical (most populated) subfamily BG11_3125 SM00725 NEAr Transporter domain BG11_3128 SM00646 BG11_3128 BG11_3151 SM00507 HNH nucleases BG11_316 SM00849 Metallo-beta-lactamase superfamily BG11_3175 SM00530 Helix-turn-helix XRE-family like proteins BG11_3176 SM00530 Helix-turn-helix XRE-family like proteins BG11_3181 SM00857 Resolvase, N terminal domain BG11_3182 SM00763 PrkA AAA domain BG11_3184 SM00052 Putative diguanylate phosphodiesterase BG11_3184 SM00091 PAS domain BG11_3184 SM00267 diguanylate cyclase BG11_3187 SM00567 E-Z type HEAT repeats BG11_3219 SM00382 ATPases associated with a variety of cellular activities BG11_322 SM00382 ATPases associated with a variety of cellular activities BG11_3223 SM00382 ATPases associated with a variety of cellular activities BG11_3228 SM00478 endonuclease III BG11_3228 SM00525 BG11_3228 BG11_3244 SM00984 UDP binding domain BG11_3254 SM00530 Helix-turn-helix XRE-family like proteins BG11_3259 SM00478 endonuclease III BG11_326 SM00871 Bacterial transcription activator, effector binding domain BG11_3278 SM00226 Low molecular weight phosphatase family BG11_3280 SM00831 Cation transporter/ATPase, N-terminus BG11_3289 SM00946 Prolyl-tRNA synthetase, C-terminal BG11_3294 SM00530 Helix-turn-helix XRE-family like proteins BG11_33 SM00342 helix_turn_helix, arabinose operon control protein BG11_3302 SM00060 Fibronectin type 3 domain BG11_3302 SM00636 BG11_3302 BG11_3302 SM00637 BG11_3302 BG11_3303 SM00382 ATPases associated with a variety of cellular activities BG11_3304 SM00382 ATPases associated with a variety of cellular activities BG11_3308 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG11_3308 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG11_3312 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BG11_3312 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BG11_3312 SM00493 BG11_3312 BG11_3316 SM00642 Alpha-amylase domain BG11_3318 SM00100 Cyclic nucleotide-monophosphate binding domain BG11_3318 SM00419 helix_turn_helix, cAMP Regulatory protein BG11_3324 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG11_3324 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG11_3325 SM00382 ATPases associated with a variety of cellular activities BG11_3326 SM00062 Bacterial periplasmic substrate-binding proteins BG11_3326 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BG11_333 SM00636 BG11_333 BG11_334 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG11_3347 SM01007 Class II Aldolase and Adducin N-terminal domain BG11_3356 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BG11_3369 SM00382 ATPases associated with a variety of cellular activities BG11_3372 SM00046 Diacylglycerol kinase catalytic domain (presumed) BG11_3373 SM00845 GatB domain BG11_3377 SM00347 helix_turn_helix multiple antibiotic resistance protein BG11_3383 SM00382 ATPases associated with a variety of cellular activities BG11_3383 SM00930 BG11_3383 BG11_3389 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BG11_3389 SM00292 breast cancer carboxy-terminal domain BG11_3389 SM00532 Ligase N family BG11_3393 SM00244 prohibitin homologues BG11_3395 SM01209 BG11_3395 BG11_3395 SM01210 BG11_3395 BG11_3396 SM00798 AICARFT/IMPCHase bienzyme BG11_3396 SM00851 MGS-like domain BG11_3401 SM01211 BG11_3401 BG11_3404 SM00998 Adenylosuccinate lyase C-terminus BG11_3406 SM01001 AIR carboxylase BG11_3419 SM00448 cheY-homologous receiver domain BG11_3419 SM00862 Transcriptional regulatory protein, C terminal BG11_3420 SM00387 Histidine kinase-like ATPases BG11_3420 SM00388 His Kinase A (phosphoacceptor) domain BG11_3421 SM00382 ATPases associated with a variety of cellular activities BG11_3434 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG11_3434 SM00387 Histidine kinase-like ATPases BG11_3434 SM00388 His Kinase A (phosphoacceptor) domain BG11_3435 SM00448 cheY-homologous receiver domain BG11_3435 SM00862 Transcriptional regulatory protein, C terminal BG11_3439 SM00883 Chaperonin 10 Kd subunit BG11_3442 SM00881 CoA binding domain BG11_3443 SM00382 ATPases associated with a variety of cellular activities BG11_346 SM00849 Metallo-beta-lactamase superfamily BG11_3465 SM00731 SprT homologues. BG11_3466 SM00316 Ribosomal protein S1-like RNA-binding domain BG11_3466 SM00732 Likely ribonuclease with RNase H fold. BG11_3469 SM01005 Alanine racemase, C-terminal domain BG11_3474 SM00487 DEAD-like helicases superfamily BG11_3474 SM00490 helicase superfamily c-terminal domain BG11_3487 SM00382 ATPases associated with a variety of cellular activities BG11_3488 SM00382 ATPases associated with a variety of cellular activities BG11_3496 SM00382 ATPases associated with a variety of cellular activities BG11_3497 SM00421 helix_turn_helix, Lux Regulon BG11_3497 SM00448 cheY-homologous receiver domain BG11_3498 SM00387 Histidine kinase-like ATPases BG11_3499 SM00382 ATPases associated with a variety of cellular activities BG11_3509 SM00354 helix_turn _helix lactose operon repressor BG11_3511 SM00563 Phosphate acyltransferases BG11_353 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG11_353 SM00866 BG11_353 BG11_3530 SM00342 helix_turn_helix, arabinose operon control protein BG11_3533 SM00382 ATPases associated with a variety of cellular activities BG11_3534 SM00382 ATPases associated with a variety of cellular activities BG11_3544 SM00829 Enoylreductase BG11_3546 SM00382 ATPases associated with a variety of cellular activities BG11_3546 SM00930 BG11_3546 BG11_3555 SM01350 BG11_3555 BG11_3558 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG11_3558 SM00895 BG11_3558 BG11_358 SM00914 BG11_358 BG11_3582 SM01251 BG11_3582 BG11_3585 SM00646 BG11_3585 BG11_3591 SM00382 ATPases associated with a variety of cellular activities BG11_3592 SM00382 ATPases associated with a variety of cellular activities BG11_3594 SM00662 RNA polymerases D BG11_3598 SM00316 Ribosomal protein S1-like RNA-binding domain BG11_3610 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BG11_3611 SM01374 BG11_3611 BG11_3615 SM00322 K homology RNA-binding domain BG11_3618 SM01382 BG11_3618 BG11_3618 SM01383 BG11_3618 BG11_3622 SM01403 BG11_3622 BG11_3624 SM00838 Elongation factor G C-terminus BG11_3624 SM00889 Elongation factor G, domain IV BG11_3628 SM00663 RNA polymerase I subunit A N-terminus BG11_3634 SM00649 Ribosomal protein L11/L12 BG11_3635 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BG11_3637 SM00421 helix_turn_helix, Lux Regulon BG11_3639 SM00967 RNA 2'-O ribose methyltransferase substrate binding BG11_3640 SM00535 Ribonuclease III family BG11_3641 SM00840 BG11_3641 BG11_3646 SM00670 Large family of predicted nucleotide-binding domains BG11_3648 SM00382 ATPases associated with a variety of cellular activities BG11_3649 SM00382 ATPases associated with a variety of cellular activities BG11_3649 SM01086 C-terminal, D2-small domain, of ClpB protein BG11_366 SM01276 BG11_366 BG11_3671 SM00530 Helix-turn-helix XRE-family like proteins BG11_3673 SM00905 Dihydroneopterin aldolase BG11_3681 SM00382 ATPases associated with a variety of cellular activities BG11_3683 SM00977 TilS substrate C-terminal domain BG11_3684 SM00331 Sigma factor PP2C-like phosphatases BG11_3684 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BG11_3687 SM00316 Ribosomal protein S1-like RNA-binding domain BG11_3691 SM00363 S4 RNA-binding domain BG11_3694 SM00966 SpoVT / AbrB like domain BG11_3695 SM00487 DEAD-like helicases superfamily BG11_3695 SM00490 helicase superfamily c-terminal domain BG11_3695 SM00982 BG11_3695 BG11_3695 SM01058 CarD-like/TRCF domain BG11_3698 SM01400 BG11_3698 BG11_370 SM00829 Enoylreductase BG11_3707 SM00650 Ribosomal RNA adenine dimethylases BG11_3708 SM00493 BG11_3708 BG11_3711 SM00966 SpoVT / AbrB like domain BG11_3729 SM00493 BG11_3729 BG11_3731 SM00382 ATPases associated with a variety of cellular activities BG11_374 SM00861 Transketolase, pyrimidine binding domain BG11_3741 SM00936 Penicillin-binding protein 5, C-terminal domain BG11_3742 SM00116 Domain in cystathionine beta-synthase and other proteins. BG11_3742 SM01240 BG11_3742 BG11_375 SM01350 BG11_375 BG11_3750 SM00434 DNA Topoisomerase IV BG11_3751 SM00387 Histidine kinase-like ATPases BG11_3751 SM00433 TopoisomeraseII BG11_3754 SM00480 DNA polymerase III beta subunit BG11_3755 SM00382 ATPases associated with a variety of cellular activities BG11_3755 SM00760 Bacterial dnaA protein helix-turn-helix domain BG11_3759 SM00393 Putative single-stranded nucleic acids-binding domain BG11_3759 SM01245 BG11_3759 BG11_3761 SM01228 BG11_3761 BG11_3763 SM00470 ParB-like nuclease domain BG11_3765 SM00470 ParB-like nuclease domain BG11_3774 SM00267 diguanylate cyclase BG11_3777 SM00788 Adenylosuccinate synthetase BG11_3782 SM00448 cheY-homologous receiver domain BG11_3782 SM00862 Transcriptional regulatory protein, C terminal BG11_3783 SM00091 PAS domain BG11_3783 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG11_3783 SM00387 Histidine kinase-like ATPases BG11_3783 SM00388 His Kinase A (phosphoacceptor) domain BG11_3786 SM00849 Metallo-beta-lactamase superfamily BG11_3787 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BG11_3792 SM01240 BG11_3792 BG11_3794 SM00487 DEAD-like helicases superfamily BG11_3794 SM00490 helicase superfamily c-terminal domain BG11_38 SM00382 ATPases associated with a variety of cellular activities BG11_3805 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BG11_3805 SM00387 Histidine kinase-like ATPases BG11_3806 SM00448 cheY-homologous receiver domain BG11_3806 SM00850 LytTr DNA-binding domain BG11_3817 SM00382 ATPases associated with a variety of cellular activities BG11_3822 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG11_3828 SM00448 cheY-homologous receiver domain BG11_3828 SM00850 LytTr DNA-binding domain BG11_383 SM00422 helix_turn_helix, mercury resistance BG11_3831 SM00267 diguanylate cyclase BG11_3833 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BG11_3834 SM00421 helix_turn_helix, Lux Regulon BG11_3834 SM00448 cheY-homologous receiver domain BG11_3836 SM00100 Cyclic nucleotide-monophosphate binding domain BG11_384 SM01091 Transporter associated domain BG11_3843 SM00354 helix_turn _helix lactose operon repressor BG11_3845 SM00382 ATPases associated with a variety of cellular activities BG11_3847 SM00986 Uracil DNA glycosylase superfamily BG11_3847 SM00987 UreE urease accessory protein, C-terminal domain BG11_3856 SM00936 Penicillin-binding protein 5, C-terminal domain BG11_3866 SM00382 ATPases associated with a variety of cellular activities BG11_3868 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG11_3874 SM00422 helix_turn_helix, mercury resistance BG11_3882 SM00836 DALR anticodon binding domain BG11_3882 SM01016 Arginyl tRNA synthetase N terminal dom BG11_389 SM00028 Tetratricopeptide repeats BG11_3891 SM00421 helix_turn_helix, Lux Regulon BG11_3892 SM00530 Helix-turn-helix XRE-family like proteins BG11_3894 SM00052 Putative diguanylate phosphodiesterase BG11_3894 SM00267 diguanylate cyclase BG11_3896 SM00155 Phospholipase D. Active site motifs. BG11_3906 SM00448 cheY-homologous receiver domain BG11_3910 SM00357 Cold shock protein domain BG11_3910 SM00382 ATPases associated with a variety of cellular activities BG11_3910 SM00959 Rho termination factor, N-terminal domain BG11_3913 SM00937 BG11_3913 BG11_3920 SM00903 Flavin reductase like domain BG11_3923 SM00226 Low molecular weight phosphatase family BG11_3936 SM00382 ATPases associated with a variety of cellular activities BG11_3940 SM00052 Putative diguanylate phosphodiesterase BG11_3940 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BG11_3940 SM00091 PAS domain BG11_3940 SM00267 diguanylate cyclase BG11_3956 SM00850 LytTr DNA-binding domain BG11_3957 SM00382 ATPases associated with a variety of cellular activities BG11_3968 SM00382 ATPases associated with a variety of cellular activities BG11_3974 SM00448 cheY-homologous receiver domain BG11_3974 SM00862 Transcriptional regulatory protein, C terminal BG11_3975 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG11_3975 SM00387 Histidine kinase-like ATPases BG11_3975 SM00388 His Kinase A (phosphoacceptor) domain BG11_3980 SM00382 ATPases associated with a variety of cellular activities BG11_3990 SM00487 DEAD-like helicases superfamily BG11_3990 SM00490 helicase superfamily c-terminal domain BG11_3996 SM00287 Bacterial SH3 domain homologues BG11_400 SM00382 ATPases associated with a variety of cellular activities BG11_4002 SM00287 Bacterial SH3 domain homologues BG11_402 SM01266 BG11_402 BG11_4033 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. BG11_4034 SM00382 ATPases associated with a variety of cellular activities BG11_4037 SM00984 UDP binding domain BG11_4044 SM00487 DEAD-like helicases superfamily BG11_4044 SM00490 helicase superfamily c-terminal domain BG11_4046 SM00357 Cold shock protein domain BG11_4048 SM00957 SecA DEAD-like domain BG11_4048 SM00958 SecA preprotein cross-linking domain BG11_4049 SM00937 BG11_4049 BG11_4051 SM00382 ATPases associated with a variety of cellular activities BG11_4053 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BG11_4053 SM00245 tail specific protease BG11_4055 SM00382 ATPases associated with a variety of cellular activities BG11_4057 SM00382 ATPases associated with a variety of cellular activities BG11_4059 SM00422 helix_turn_helix, mercury resistance BG11_4062 SM00530 Helix-turn-helix XRE-family like proteins BG11_4067 SM00422 helix_turn_helix, mercury resistance BG11_4070 SM00487 DEAD-like helicases superfamily BG11_4070 SM00490 helicase superfamily c-terminal domain BG11_4078 SM00028 Tetratricopeptide repeats BG11_4098 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BG11_4102 SM01192 BG11_4102 BG11_4102 SM01193 BG11_4102 BG11_4108 SM00316 Ribosomal protein S1-like RNA-binding domain BG11_4108 SM00357 Cold shock protein domain BG11_4108 SM00955 BG11_4108 BG11_4111 SM00448 cheY-homologous receiver domain BG11_4111 SM00862 Transcriptional regulatory protein, C terminal BG11_4115 SM00382 ATPases associated with a variety of cellular activities BG11_4125 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG11_4126 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain BG11_4130 SM00363 S4 RNA-binding domain BG11_4137 SM01276 BG11_4137 BG11_4138 SM01276 BG11_4138 BG11_414 SM00530 Helix-turn-helix XRE-family like proteins BG11_4154 SM00347 helix_turn_helix multiple antibiotic resistance protein BG11_4158 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG11_4158 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG11_4159 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG11_4159 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG11_4163 SM00387 Histidine kinase-like ATPases BG11_4163 SM00388 His Kinase A (phosphoacceptor) domain BG11_4164 SM00448 cheY-homologous receiver domain BG11_4164 SM00862 Transcriptional regulatory protein, C terminal BG11_4169 SM00530 Helix-turn-helix XRE-family like proteins BG11_417 SM00382 ATPases associated with a variety of cellular activities BG11_4184 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG11_4184 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG11_4193 SM00849 Metallo-beta-lactamase superfamily BG11_4195 SM00530 Helix-turn-helix XRE-family like proteins BG11_4211 SM00493 BG11_4211 BG11_4214 SM00382 ATPases associated with a variety of cellular activities BG11_4214 SM00930 BG11_4214 BG11_4218 SM00382 ATPases associated with a variety of cellular activities BG11_4227 SM00729 Elongator protein 3, MiaB family, Radical SAM BG11_4229 SM00855 Phosphoglycerate mutase family BG11_4232 SM00422 helix_turn_helix, mercury resistance BG11_4239 SM00420 helix_turn_helix, Deoxyribose operon repressor BG11_4254 SM00382 ATPases associated with a variety of cellular activities BG11_4263 SM00871 Bacterial transcription activator, effector binding domain BG11_4281 SM00479 BG11_4281 BG11_4282 SM01298 BG11_4282 BG11_4289 SM00344 helix_turn_helix ASNC type BG11_4291 SM00316 Ribosomal protein S1-like RNA-binding domain BG11_4327 SM00642 Alpha-amylase domain BG11_4335 SM00357 Cold shock protein domain BG11_434 SM00530 Helix-turn-helix XRE-family like proteins BG11_4343 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BG11_4344 SM00448 cheY-homologous receiver domain BG11_4344 SM00862 Transcriptional regulatory protein, C terminal BG11_4345 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG11_4345 SM00387 Histidine kinase-like ATPases BG11_4345 SM00388 His Kinase A (phosphoacceptor) domain BG11_4353 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG11_4353 SM00866 BG11_4353 BG11_4358 SM00382 ATPases associated with a variety of cellular activities BG11_4361 SM00387 Histidine kinase-like ATPases BG11_4362 SM00448 cheY-homologous receiver domain BG11_4362 SM00862 Transcriptional regulatory protein, C terminal BG11_4363 SM00342 helix_turn_helix, arabinose operon control protein BG11_4363 SM00871 Bacterial transcription activator, effector binding domain BG11_4364 SM00382 ATPases associated with a variety of cellular activities BG11_4372 SM00046 Diacylglycerol kinase catalytic domain (presumed) BG11_4378 SM00448 cheY-homologous receiver domain BG11_4378 SM00862 Transcriptional regulatory protein, C terminal BG11_4379 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG11_4379 SM00387 Histidine kinase-like ATPases BG11_4379 SM00388 His Kinase A (phosphoacceptor) domain BG11_4381 SM00899 BG11_4381 BG11_4394 SM00894 Excalibur calcium-binding domain BG11_4398 SM01234 BG11_4398 BG11_4399 SM00947 Carbonic anhydrase BG11_44 SM00411 bacterial (prokaryotic) histone like domain BG11_4411 SM00382 ATPases associated with a variety of cellular activities BG11_4417 SM00387 Histidine kinase-like ATPases BG11_4417 SM00388 His Kinase A (phosphoacceptor) domain BG11_4418 SM00387 Histidine kinase-like ATPases BG11_4429 SM00852 Probable molybdopterin binding domain BG11_4432 SM00014 Acid phosphatase homologues BG11_4440 SM00382 ATPases associated with a variety of cellular activities BG11_4442 SM00729 Elongator protein 3, MiaB family, Radical SAM BG11_4446 SM00382 ATPases associated with a variety of cellular activities BG11_445 SM00382 ATPases associated with a variety of cellular activities BG11_4461 SM00450 Rhodanese Homology Domain BG11_4465 SM00729 Elongator protein 3, MiaB family, Radical SAM BG11_4468 SM00852 Probable molybdopterin binding domain BG11_4475 SM01058 CarD-like/TRCF domain BG11_4480 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG11_4484 SM00363 S4 RNA-binding domain BG11_4485 SM00420 helix_turn_helix, Deoxyribose operon repressor BG11_4488 SM00642 Alpha-amylase domain BG11_4492 SM00849 Metallo-beta-lactamase superfamily BG11_4500 SM00843 BG11_4500 BG11_4511 SM00354 helix_turn _helix lactose operon repressor BG11_4518 SM00248 ankyrin repeats BG11_4519 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG11_4519 SM00387 Histidine kinase-like ATPases BG11_4519 SM00388 His Kinase A (phosphoacceptor) domain BG11_4520 SM00448 cheY-homologous receiver domain BG11_4520 SM00862 Transcriptional regulatory protein, C terminal BG11_4524 SM00116 Domain in cystathionine beta-synthase and other proteins. BG11_4530 SM00363 S4 RNA-binding domain BG11_4533 SM00363 S4 RNA-binding domain BG11_4533 SM01390 BG11_4533 BG11_4541 SM00981 BG11_4541 BG11_4566 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BG11_4566 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BG11_4568 SM00530 Helix-turn-helix XRE-family like proteins BG11_4580 SM00849 Metallo-beta-lactamase superfamily BG11_4582 SM00116 Domain in cystathionine beta-synthase and other proteins. BG11_4589 SM00481 DNA polymerase alpha chain like domain BG11_4590 SM00919 Malic enzyme, NAD binding domain BG11_4590 SM01274 BG11_4590 BG11_4591 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG11_460 SM00347 helix_turn_helix multiple antibiotic resistance protein BG11_4600 SM01329 BG11_4600 BG11_4605 SM00448 cheY-homologous receiver domain BG11_4605 SM00862 Transcriptional regulatory protein, C terminal BG11_4606 SM00091 PAS domain BG11_4606 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG11_4606 SM00387 Histidine kinase-like ATPases BG11_4606 SM00388 His Kinase A (phosphoacceptor) domain BG11_4607 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BG11_4607 SM00474 3'-5' exonuclease BG11_4607 SM00475 5'-3' exonuclease BG11_4607 SM00482 DNA polymerase A domain BG11_4608 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BG11_4608 SM01232 BG11_4608 BG11_4611 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BG11_4615 SM00382 ATPases associated with a variety of cellular activities BG11_4617 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BG11_4632 SM00967 RNA 2'-O ribose methyltransferase substrate binding BG11_4634 SM00873 B3/4 domain BG11_4634 SM00874 tRNA synthetase B5 domain BG11_4634 SM00896 Ferredoxin-fold anticodon binding domain BG11_4642 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BG11_4642 SM00481 DNA polymerase alpha chain like domain BG11_4642 SM00483 DNA polymerase X family BG11_4643 SM00463 Small MutS-related domain BG11_4643 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BG11_4643 SM00534 ATPase domain of DNA mismatch repair MUTS family BG11_4645 SM00363 S4 RNA-binding domain BG11_4647 SM00725 NEAr Transporter domain BG11_4648 SM00725 NEAr Transporter domain BG11_4649 SM00725 NEAr Transporter domain BG11_4652 SM00382 ATPases associated with a variety of cellular activities BG11_4656 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BG11_4659 SM00448 cheY-homologous receiver domain BG11_4659 SM00862 Transcriptional regulatory protein, C terminal BG11_4660 SM00387 Histidine kinase-like ATPases BG11_4660 SM00388 His Kinase A (phosphoacceptor) domain BG11_4661 SM00382 ATPases associated with a variety of cellular activities BG11_4673 SM00893 Electron transfer flavoprotein domain BG11_4674 SM00893 Electron transfer flavoprotein domain BG11_4676 SM00465 GIY-YIG type nucleases (URI domain) BG11_4686 SM00382 ATPases associated with a variety of cellular activities BG11_4691 SM00530 Helix-turn-helix XRE-family like proteins BG11_4694 SM00342 helix_turn_helix, arabinose operon control protein BG11_4694 SM00448 cheY-homologous receiver domain BG11_4696 SM00382 ATPases associated with a variety of cellular activities BG11_4697 SM00382 ATPases associated with a variety of cellular activities BG11_470 SM00287 Bacterial SH3 domain homologues BG11_470 SM00644 BG11_470 BG11_4705 SM00421 helix_turn_helix, Lux Regulon BG11_4708 SM00530 Helix-turn-helix XRE-family like proteins BG11_4711 SM00530 Helix-turn-helix XRE-family like proteins BG11_4713 SM00857 Resolvase, N terminal domain BG11_4714 SM00857 Resolvase, N terminal domain BG11_4718 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG11_4719 SM00226 Low molecular weight phosphatase family BG11_4721 SM00382 ATPases associated with a variety of cellular activities BG11_4727 SM00857 Resolvase, N terminal domain BG11_4737 SM00909 Sporulation and spore germination BG11_474 SM00342 helix_turn_helix, arabinose operon control protein BG11_4750 SM00382 ATPases associated with a variety of cellular activities BG11_4750 SM00994 ClpX C4-type zinc finger BG11_4750 SM01086 C-terminal, D2-small domain, of ClpB protein BG11_4751 SM00382 ATPases associated with a variety of cellular activities BG11_4752 SM00382 ATPases associated with a variety of cellular activities BG11_4752 SM00464 Found in ATP-dependent protease La (LON) BG11_4755 SM00347 helix_turn_helix multiple antibiotic resistance protein BG11_4760 SM01004 Delta-aminolevulinic acid dehydratase BG11_4762 SM00257 Lysin motif BG11_4780 SM01317 BG11_4780 BG11_4782 SM00448 cheY-homologous receiver domain BG11_4782 SM00862 Transcriptional regulatory protein, C terminal BG11_4783 SM00387 Histidine kinase-like ATPases BG11_4784 SM00382 ATPases associated with a variety of cellular activities BG11_4794 SM00257 Lysin motif BG11_4799 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BG11_48 SM00636 BG11_48 BG11_4800 SM00382 ATPases associated with a variety of cellular activities BG11_4804 SM01323 BG11_4804 BG11_4813 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG11_4813 SM00954 Region found in RelA / SpoT proteins BG11_4821 SM00382 ATPases associated with a variety of cellular activities BG11_4825 SM00028 Tetratricopeptide repeats BG11_4832 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BG11_4834 SM00732 Likely ribonuclease with RNase H fold. BG11_4853 SM00382 ATPases associated with a variety of cellular activities BG11_4858 SM00530 Helix-turn-helix XRE-family like proteins BG11_486 SM00344 helix_turn_helix ASNC type BG11_4867 SM00855 Phosphoglycerate mutase family BG11_4872 SM00098 Alkaline phosphatase homologues BG11_4874 SM00954 Region found in RelA / SpoT proteins BG11_4885 SM01103 BG11_4885 BG11_4887 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG11_4891 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BG11_4893 SM00849 Metallo-beta-lactamase superfamily BG11_4899 SM00838 Elongation factor G C-terminus BG11_4901 SM00729 Elongator protein 3, MiaB family, Radical SAM BG11_4905 SM00271 DnaJ molecular chaperone homology domain BG11_4908 SM00729 Elongator protein 3, MiaB family, Radical SAM BG11_4914 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG11_4921 SM00116 Domain in cystathionine beta-synthase and other proteins. BG11_4923 SM00400 zinc finger BG11_4923 SM00493 BG11_4923 BG11_4923 SM00766 DNA primase DnaG DnaB-binding BG11_4930 SM00487 DEAD-like helicases superfamily BG11_4930 SM00490 helicase superfamily c-terminal domain BG11_4931 SM00518 AP endonuclease family 2 BG11_4934 SM00382 ATPases associated with a variety of cellular activities BG11_4947 SM00382 ATPases associated with a variety of cellular activities BG11_4955 SM00849 Metallo-beta-lactamase superfamily BG11_4957 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG11_496 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG11_496 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG11_496 SM00319 Homologues of the ligand binding domain of Tar BG11_4962 SM01018 B12 binding domain BG11_4973 SM00857 Resolvase, N terminal domain BG11_4974 SM00497 Intron encoded nuclease repeat motif BG11_4987 SM00507 HNH nucleases BG11_4990 SM00901 BG11_4990 BG11_5003 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. BG11_5010 SM00487 DEAD-like helicases superfamily BG11_5010 SM00490 helicase superfamily c-terminal domain BG11_5016 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG11_5017 SM00382 ATPases associated with a variety of cellular activities BG11_5027 SM00354 helix_turn _helix lactose operon repressor BG11_5028 SM00450 Rhodanese Homology Domain BG11_503 SM00028 Tetratricopeptide repeats BG11_5032 SM00529 Helix-turn-helix diphteria tox regulatory element BG11_5039 SM00841 Elongation factor P, C-terminal BG11_5039 SM01185 BG11_5039 BG11_504 SM00354 helix_turn _helix lactose operon repressor BG11_5043 SM00382 ATPases associated with a variety of cellular activities BG11_5053 SM00878 Biotin carboxylase C-terminal domain BG11_5060 SM00861 Transketolase, pyrimidine binding domain BG11_5061 SM00363 S4 RNA-binding domain BG11_5064 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BG11_5065 SM00448 cheY-homologous receiver domain BG11_5070 SM00091 PAS domain BG11_5070 SM00382 ATPases associated with a variety of cellular activities BG11_5072 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BG11_5076 SM00861 Transketolase, pyrimidine binding domain BG11_5082 SM00062 Bacterial periplasmic substrate-binding proteins BG11_5082 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BG11_5084 SM00382 ATPases associated with a variety of cellular activities BG11_5093 SM00849 Metallo-beta-lactamase superfamily BG11_5097 SM00849 Metallo-beta-lactamase superfamily BG11_5100 SM00859 Semialdehyde dehydrogenase, NAD binding domain BG11_5107 SM00347 helix_turn_helix multiple antibiotic resistance protein BG11_5117 SM00729 Elongator protein 3, MiaB family, Radical SAM BG11_5117 SM00876 Biotin and Thiamin Synthesis associated domain BG11_5123 SM00704 CDGSH-type zinc finger. Function unknown. BG11_5127 SM00354 helix_turn _helix lactose operon repressor BG11_5146 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BG11_5150 SM00347 helix_turn_helix multiple antibiotic resistance protein BG11_5153 SM00382 ATPases associated with a variety of cellular activities BG11_5154 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG11_5155 SM00936 Penicillin-binding protein 5, C-terminal domain BG11_5157 SM00387 Histidine kinase-like ATPases BG11_5176 SM00849 Metallo-beta-lactamase superfamily BG11_5179 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG11_5179 SM00866 BG11_5179 BG11_5181 SM01061 CAT RNA binding domain BG11_5188 SM00267 diguanylate cyclase BG11_5193 SM01007 Class II Aldolase and Adducin N-terminal domain BG11_520 SM00448 cheY-homologous receiver domain BG11_520 SM00862 Transcriptional regulatory protein, C terminal BG11_521 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG11_521 SM00387 Histidine kinase-like ATPases BG11_521 SM00388 His Kinase A (phosphoacceptor) domain BG11_5210 SM00382 ATPases associated with a variety of cellular activities BG11_5217 SM00382 ATPases associated with a variety of cellular activities BG11_5218 SM00642 Alpha-amylase domain BG11_5219 SM00642 Alpha-amylase domain BG11_5223 SM00354 helix_turn _helix lactose operon repressor BG11_5226 SM00387 Histidine kinase-like ATPases BG11_5226 SM00388 His Kinase A (phosphoacceptor) domain BG11_523 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG11_5235 SM00267 diguanylate cyclase BG11_5243 SM00052 Putative diguanylate phosphodiesterase BG11_525 SM00382 ATPases associated with a variety of cellular activities BG11_5256 SM00849 Metallo-beta-lactamase superfamily BG11_5262 SM00861 Transketolase, pyrimidine binding domain BG11_5278 SM00838 Elongation factor G C-terminus BG11_5283 SM00670 Large family of predicted nucleotide-binding domains BG11_5287 SM00878 Biotin carboxylase C-terminal domain BG11_5296 SM00507 HNH nucleases BG11_5302 SM00855 Phosphoglycerate mutase family BG11_5310 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BG11_5314 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains BG11_5320 SM00740 BG11_5320 BG11_5321 SM00740 BG11_5321 BG11_5329 SM00842 Cell division protein FtsA BG11_5330 SM00864 Tubulin/FtsZ family, GTPase domain BG11_5330 SM00865 Tubulin/FtsZ family, C-terminal domain BG11_5339 SM00363 S4 RNA-binding domain BG11_5344 SM00363 S4 RNA-binding domain BG11_5349 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BG11_535 SM00849 Metallo-beta-lactamase superfamily BG11_5350 SM00851 MGS-like domain BG11_5350 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BG11_5350 SM01209 BG11_5350 BG11_5353 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BG11_5362 SM00831 Cation transporter/ATPase, N-terminus BG11_5365 SM00072 Guanylate kinase homologues. BG11_5366 SM01409 BG11_5366 BG11_5368 SM00487 DEAD-like helicases superfamily BG11_5368 SM00490 helicase superfamily c-terminal domain BG11_5373 SM00331 Sigma factor PP2C-like phosphatases BG11_5373 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BG11_5374 SM00220 Serine/Threonine protein kinases, catalytic domain BG11_5374 SM00740 BG11_5374 BG11_5377 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain BG11_5380 SM01120 BG11_5380 BG11_5380 SM01121 BG11_5380 BG11_5381 SM00487 DEAD-like helicases superfamily BG11_5381 SM00490 helicase superfamily c-terminal domain BG11_5384 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BG11_5385 SM00822 BG11_5385 BG11_5387 SM00358 Double-stranded RNA binding motif BG11_5387 SM00535 Ribonuclease III family BG11_5388 SM00968 SMC proteins Flexible Hinge Domain BG11_5389 SM00382 ATPases associated with a variety of cellular activities BG11_5389 SM00962 SRP54-type protein, GTPase domain BG11_5389 SM00963 SRP54-type protein, helical bundle domain BG11_5391 SM00382 ATPases associated with a variety of cellular activities BG11_5391 SM00962 SRP54-type protein, GTPase domain BG11_5391 SM00963 SRP54-type protein, helical bundle domain BG11_54 SM00420 helix_turn_helix, Deoxyribose operon repressor BG11_54 SM01134 BG11_54 BG11_5401 SM00881 CoA binding domain BG11_5403 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BG11_5403 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BG11_5403 SM00493 BG11_5403 BG11_5407 SM00382 ATPases associated with a variety of cellular activities BG11_5407 SM01086 C-terminal, D2-small domain, of ClpB protein BG11_5416 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BG11_5418 SM00479 BG11_5418 BG11_5418 SM00481 DNA polymerase alpha chain like domain BG11_5420 SM00316 Ribosomal protein S1-like RNA-binding domain BG11_5420 SM00322 K homology RNA-binding domain BG11_5427 SM00904 Riboflavin kinase BG11_5428 SM01387 BG11_5428 BG11_5429 SM00316 Ribosomal protein S1-like RNA-binding domain BG11_5429 SM00322 K homology RNA-binding domain BG11_5435 SM00859 Semialdehyde dehydrogenase, NAD binding domain BG11_5437 SM01130 BG11_5437 BG11_5438 SM00849 Metallo-beta-lactamase superfamily BG11_5441 SM00382 ATPases associated with a variety of cellular activities BG11_5441 SM00843 BG11_5441 BG11_5442 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG11_5442 SM00866 BG11_5442 BG11_5444 SM00382 ATPases associated with a variety of cellular activities BG11_545 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG11_545 SM00387 Histidine kinase-like ATPases BG11_545 SM00388 His Kinase A (phosphoacceptor) domain BG11_5454 SM00852 Probable molybdopterin binding domain BG11_5455 SM00382 ATPases associated with a variety of cellular activities BG11_5457 SM00322 K homology RNA-binding domain BG11_5457 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG11_546 SM00448 cheY-homologous receiver domain BG11_546 SM00862 Transcriptional regulatory protein, C terminal BG11_5479 SM00530 Helix-turn-helix XRE-family like proteins BG11_5486 SM00530 Helix-turn-helix XRE-family like proteins BG11_5492 SM00382 ATPases associated with a variety of cellular activities BG11_5498 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BG11_5498 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BG11_5498 SM00493 BG11_5498 BG11_5499 SM00327 von Willebrand factor (vWF) type A domain BG11_5500 SM00966 SpoVT / AbrB like domain BG11_5501 SM00860 SMI1 / KNR4 family BG11_5503 SM01126 BG11_5503 BG11_5511 SM00382 ATPases associated with a variety of cellular activities BG11_5513 SM00226 Low molecular weight phosphatase family BG11_5515 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG11_5521 SM00729 Elongator protein 3, MiaB family, Radical SAM BG11_5522 SM00028 Tetratricopeptide repeats BG11_5522 SM00530 Helix-turn-helix XRE-family like proteins BG11_5524 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG11_5525 SM01209 BG11_5525 BG11_5527 SM00347 helix_turn_helix multiple antibiotic resistance protein BG11_553 SM00347 helix_turn_helix multiple antibiotic resistance protein BG11_5558 SM00470 ParB-like nuclease domain BG11_5560 SM00287 Bacterial SH3 domain homologues BG11_5565 SM00062 Bacterial periplasmic substrate-binding proteins BG11_5565 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BG11_5567 SM00382 ATPases associated with a variety of cellular activities BG11_5570 SM00448 cheY-homologous receiver domain BG11_5570 SM00862 Transcriptional regulatory protein, C terminal BG11_5571 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG11_5571 SM00387 Histidine kinase-like ATPases BG11_5571 SM00388 His Kinase A (phosphoacceptor) domain BG11_5578 SM00860 SMI1 / KNR4 family BG11_5585 SM00829 Enoylreductase BG11_5593 SM00857 Resolvase, N terminal domain BG11_560 SM00342 helix_turn_helix, arabinose operon control protein BG11_5607 SM00857 Resolvase, N terminal domain BG11_5609 SM00857 Resolvase, N terminal domain BG11_5612 SM00857 Resolvase, N terminal domain BG11_5613 SM00342 helix_turn_helix, arabinose operon control protein BG11_5613 SM00871 Bacterial transcription activator, effector binding domain BG11_5638 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG11_5667 SM00507 HNH nucleases BG11_567 SM00344 helix_turn_helix ASNC type BG11_5686 SM00507 HNH nucleases BG11_5689 SM00530 Helix-turn-helix XRE-family like proteins BG11_5691 SM00480 DNA polymerase III beta subunit BG11_5698 SM00507 HNH nucleases BG11_57 SM00287 Bacterial SH3 domain homologues BG11_5713 SM00507 HNH nucleases BG11_572 SM00448 cheY-homologous receiver domain BG11_572 SM00862 Transcriptional regulatory protein, C terminal BG11_5720 SM00382 ATPases associated with a variety of cellular activities BG11_5726 SM00245 tail specific protease BG11_573 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG11_573 SM00387 Histidine kinase-like ATPases BG11_573 SM00388 His Kinase A (phosphoacceptor) domain BG11_5734 SM00487 DEAD-like helicases superfamily BG11_5734 SM00490 helicase superfamily c-terminal domain BG11_5761 SM00644 BG11_5761 BG11_5764 SM00465 GIY-YIG type nucleases (URI domain) BG11_577 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG11_5770 SM00422 helix_turn_helix, mercury resistance BG11_5776 SM00894 Excalibur calcium-binding domain BG11_5777 SM00530 Helix-turn-helix XRE-family like proteins BG11_5781 SM00530 Helix-turn-helix XRE-family like proteins BG11_5782 SM00530 Helix-turn-helix XRE-family like proteins BG11_5783 SM01040 BRO family, N-terminal domain BG11_579 SM00226 Low molecular weight phosphatase family BG11_5793 SM00382 ATPases associated with a variety of cellular activities BG11_583 SM00421 helix_turn_helix, Lux Regulon BG11_5841 SM00857 Resolvase, N terminal domain BG11_6 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BG11_6 SM00534 ATPase domain of DNA mismatch repair MUTS family BG11_607 SM01060 BG11_607 BG11_612 SM00387 Histidine kinase-like ATPases BG11_613 SM00448 cheY-homologous receiver domain BG11_624 SM00530 Helix-turn-helix XRE-family like proteins BG11_625 SM00870 BG11_625 BG11_63 SM00382 ATPases associated with a variety of cellular activities BG11_641 SM00849 Metallo-beta-lactamase superfamily BG11_655 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG11_659 SM00346 helix_turn_helix isocitrate lyase regulation BG11_660 SM00796 Allophanate hydrolase subunit 1 BG11_661 SM00797 Allophanate hydrolase subunit 2 BG11_68 SM00422 helix_turn_helix, mercury resistance BG11_688 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG11_69 SM01230 BG11_69 BG11_693 SM00342 helix_turn_helix, arabinose operon control protein BG11_693 SM00871 Bacterial transcription activator, effector binding domain BG11_698 SM00382 ATPases associated with a variety of cellular activities BG11_7 SM00853 MutL C terminal dimerisation domain BG11_7 SM01340 BG11_7 BG11_700 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG11_701 SM00382 ATPases associated with a variety of cellular activities BG11_709 SM00422 helix_turn_helix, mercury resistance BG11_712 SM00855 Phosphoglycerate mutase family BG11_726 SM00889 Elongation factor G, domain IV BG11_727 SM00347 helix_turn_helix multiple antibiotic resistance protein BG11_730 SM00860 SMI1 / KNR4 family BG11_736 SM01060 BG11_736 BG11_756 SM00850 LytTr DNA-binding domain BG11_761 SM00530 Helix-turn-helix XRE-family like proteins BG11_763 SM00098 Alkaline phosphatase homologues BG11_767 SM00346 helix_turn_helix isocitrate lyase regulation BG11_774 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BG11_778 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG11_785 SM01133 BG11_785 BG11_789 SM00382 ATPases associated with a variety of cellular activities BG11_79 SM00857 Resolvase, N terminal domain BG11_796 SM00091 PAS domain BG11_796 SM00382 ATPases associated with a variety of cellular activities BG11_801 SM00287 Bacterial SH3 domain homologues BG11_808 SM00830 Chorismate mutase type II BG11_817 SM00382 ATPases associated with a variety of cellular activities BG11_82 SM00062 Bacterial periplasmic substrate-binding proteins BG11_83 SM00382 ATPases associated with a variety of cellular activities BG11_835 SM00028 Tetratricopeptide repeats BG11_841 SM00382 ATPases associated with a variety of cellular activities BG11_842 SM00062 Bacterial periplasmic substrate-binding proteins BG11_854 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG11_855 SM00382 ATPases associated with a variety of cellular activities BG11_87 SM00861 Transketolase, pyrimidine binding domain BG11_893 SM00448 cheY-homologous receiver domain BG11_893 SM00862 Transcriptional regulatory protein, C terminal BG11_894 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG11_894 SM00387 Histidine kinase-like ATPases BG11_894 SM00388 His Kinase A (phosphoacceptor) domain BG11_895 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BG11_90 SM00382 ATPases associated with a variety of cellular activities BG11_902 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BG11_91 SM00382 ATPases associated with a variety of cellular activities BG11_916 SM00091 PAS domain BG11_916 SM00382 ATPases associated with a variety of cellular activities BG11_920 SM01130 BG11_920 BG11_926 SM01131 BG11_926 BG11_934 SM00341 Helicase and RNase D C-terminal BG11_934 SM00487 DEAD-like helicases superfamily BG11_934 SM00490 helicase superfamily c-terminal domain BG11_934 SM00956 BG11_934 BG11_94 SM00644 BG11_94 BG11_949 SM00849 Metallo-beta-lactamase superfamily BG11_958 SM00060 Fibronectin type 3 domain BG11_958 SM00495 Chitin-binding domain type 3 BG11_965 SM00116 Domain in cystathionine beta-synthase and other proteins. BG11_965 SM00382 ATPases associated with a variety of cellular activities BG11_978 SM00861 Transketolase, pyrimidine binding domain BG11_984 SM00420 helix_turn_helix, Deoxyribose operon repressor BG11_984 SM01134 BG11_984 BG11_988 SM00382 ATPases associated with a variety of cellular activities