locus-tag class description DA68_00030 PF00107 Zinc-binding dehydrogenase DA68_00030 PF08240 Alcohol dehydrogenase GroES-like domain DA68_00040 PF00882 Zinc dependent phospholipase C DA68_00045 PF03372 Endonuclease/Exonuclease/phosphatase family DA68_00075 PF02673 Bacitracin resistance protein BacA DA68_00080 PF00672 HAMP domain DA68_00080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA68_00080 PF02743 Cache domain DA68_00085 PF07501 G5 domain DA68_00085 PF03990 G5-linked-Ubiquitin-like domain DA68_00085 PF06725 3D domain DA68_00090 PF01381 Helix-turn-helix DA68_00100 PF04203 Sortase domain DA68_00110 PF00854 POT family DA68_00115 PF05525 Branched-chain amino acid transport protein DA68_00130 PF00324 Amino acid permease DA68_00135 PF00860 Permease family DA68_00150 PF13673 Acetyltransferase (GNAT) domain DA68_00160 PF02080 TrkA-C domain DA68_00160 PF02254 TrkA-N domain DA68_00160 PF00999 Sodium/hydrogen exchanger family DA68_00170 PF00510 Cytochrome c oxidase subunit III DA68_00175 PF00115 Cytochrome C and Quinol oxidase polypeptide I DA68_00180 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DA68_00185 PF00324 Amino acid permease DA68_00190 PF13529 Peptidase_C39 like family DA68_00195 PF07687 Peptidase dimerisation domain DA68_00195 PF01546 Peptidase family M20/M25/M40 DA68_00200 PF11755 Protein of unknown function (DUF3311) DA68_00205 PF00474 Sodium:solute symporter family DA68_00210 PF03323 Bacillus/Clostridium GerA spore germination protein DA68_00215 PF03845 Spore germination protein DA68_00220 PF05504 Spore germination B3/ GerAC like, C-terminal DA68_00225 PF02421 Ferrous iron transport protein B DA68_00225 PF07664 Ferrous iron transport protein B C terminus DA68_00225 PF17910 FeoB cytosolic helical domain DA68_00225 PF07670 Nucleoside recognition DA68_00230 PF02421 Ferrous iron transport protein B DA68_00230 PF17910 FeoB cytosolic helical domain DA68_00230 PF07670 Nucleoside recognition DA68_00230 PF07664 Ferrous iron transport protein B C terminus DA68_00235 PF07670 Nucleoside recognition DA68_00235 PF02421 Ferrous iron transport protein B DA68_00235 PF04023 FeoA domain DA68_00235 PF17910 FeoB cytosolic helical domain DA68_00235 PF07664 Ferrous iron transport protein B C terminus DA68_00240 PF12849 PBP superfamily domain DA68_00245 PF00528 Binding-protein-dependent transport system inner membrane component DA68_00250 PF00528 Binding-protein-dependent transport system inner membrane component DA68_00255 PF00873 AcrB/AcrD/AcrF family DA68_00375 PF00571 CBS domain DA68_00390 PF08239 Bacterial SH3 domain DA68_00390 PF00246 Zinc carboxypeptidase DA68_00395 PF03070 TENA/THI-4/PQQC family DA68_00400 PF00005 ABC transporter DA68_00405 PF00528 Binding-protein-dependent transport system inner membrane component DA68_00410 PF09084 NMT1/THI5 like DA68_00415 PF02581 Thiamine monophosphate synthase DA68_00420 PF01266 FAD dependent oxidoreductase DA68_00425 PF02597 ThiS family DA68_00430 PF05690 Thiazole biosynthesis protein ThiG DA68_00435 PF00899 ThiF family DA68_00440 PF08543 Phosphomethylpyrimidine kinase DA68_00465 PF03814 Potassium-transporting ATPase A subunit DA68_00475 PF02669 K+-transporting ATPase, c chain DA68_00480 PF02702 Osmosensitive K+ channel His kinase sensor domain DA68_00485 PF07690 Major Facilitator Superfamily DA68_00490 PF01047 MarR family DA68_00515 PF00005 ABC transporter DA68_00525 PF00860 Permease family DA68_00535 PF17969 L,D-transpeptidase C-terminal domain DA68_00535 PF03734 L,D-transpeptidase catalytic domain DA68_00545 PF00294 pfkB family carbohydrate kinase DA68_00550 PF08244 Glycosyl hydrolases family 32 C terminal DA68_00550 PF00251 Glycosyl hydrolases family 32 N-terminal domain DA68_00555 PF02378 Phosphotransferase system, EIIC DA68_00555 PF00367 phosphotransferase system, EIIB DA68_00560 PF00356 Bacterial regulatory proteins, lacI family DA68_00560 PF13407 Periplasmic binding protein domain DA68_00570 PF00085 Thioredoxin DA68_00575 PF02600 Disulfide bond formation protein DsbB DA68_00580 PF14148 YhdB-like protein DA68_00590 PF03845 Spore germination protein DA68_00600 PF03323 Bacillus/Clostridium GerA spore germination protein DA68_00610 PF00881 Nitroreductase family DA68_00615 PF04293 SpoVR like protein DA68_00625 PF00089 Trypsin DA68_00630 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA68_00630 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DA68_00635 PF02583 Metal-sensitive transcriptional repressor DA68_00640 PF01206 Sulfurtransferase TusA DA68_00640 PF00581 Rhodanese-like domain DA68_00645 PF00753 Metallo-beta-lactamase superfamily DA68_00645 PF00581 Rhodanese-like domain DA68_00650 PF01206 Sulfurtransferase TusA DA68_00660 PF01206 Sulfurtransferase TusA DA68_00660 PF00581 Rhodanese-like domain DA68_00670 PF13686 DsrE/DsrF/DrsH-like family DA68_00675 PF01925 Sulfite exporter TauE/SafE DA68_00685 PF03816 Cell envelope-related transcriptional attenuator domain DA68_00690 PF08240 Alcohol dehydrogenase GroES-like domain DA68_00690 PF00107 Zinc-binding dehydrogenase DA68_00695 PF02690 Na+/Pi-cotransporter DA68_00700 PF07690 Major Facilitator Superfamily DA68_00710 PF05043 Mga helix-turn-helix domain DA68_00710 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DA68_00710 PF08279 HTH domain DA68_00710 PF00874 PRD domain DA68_00715 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DA68_00720 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DA68_00725 PF02378 Phosphotransferase system, EIIC DA68_00745 PF01476 LysM domain DA68_00745 PF06725 3D domain DA68_00750 PF12704 MacB-like periplasmic core domain DA68_00750 PF02687 FtsX-like permease family DA68_00755 PF00005 ABC transporter DA68_00765 PF09529 Integral membrane protein (intg_mem_TP0381) DA68_00780 PF05525 Branched-chain amino acid transport protein DA68_00785 PF05067 Manganese containing catalase DA68_00790 PF12652 CotJB protein DA68_00795 PF11007 Spore coat associated protein JA (CotJA) DA68_00810 PF02735 Ku70/Ku80 beta-barrel domain DA68_00820 PF09335 SNARE associated Golgi protein DA68_00850 PF13520 Amino acid permease DA68_00855 PF00999 Sodium/hydrogen exchanger family DA68_00865 PF01380 SIS domain DA68_00865 PF01418 Helix-turn-helix domain, rpiR family DA68_00870 PF13580 SIS domain DA68_00875 PF00367 phosphotransferase system, EIIB DA68_00875 PF02378 Phosphotransferase system, EIIC DA68_00885 PF07681 DoxX DA68_00900 PF00892 EamA-like transporter family DA68_00905 PF01037 Lrp/AsnC ligand binding domain DA68_00910 PF00583 Acetyltransferase (GNAT) family DA68_00910 PF00206 Lyase DA68_00910 PF14698 Argininosuccinate lyase C-terminal DA68_00915 PF00106 short chain dehydrogenase DA68_00920 PF13411 MerR HTH family regulatory protein DA68_00925 PF00893 Small Multidrug Resistance protein DA68_00935 PF00440 Bacterial regulatory proteins, tetR family DA68_00935 PF17934 Tetracyclin repressor-like, C-terminal domain DA68_00940 PF07690 Major Facilitator Superfamily DA68_00950 PF00486 Transcriptional regulatory protein, C terminal DA68_00950 PF00072 Response regulator receiver domain DA68_00955 PF00512 His Kinase A (phospho-acceptor) domain DA68_00955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_00965 PF00005 ABC transporter DA68_00970 PF12704 MacB-like periplasmic core domain DA68_00970 PF02687 FtsX-like permease family DA68_00975 PF00005 ABC transporter DA68_00980 PF02687 FtsX-like permease family DA68_00995 PF01638 HxlR-like helix-turn-helix DA68_01005 PF02525 Flavodoxin-like fold DA68_01015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DA68_01015 PF12793 Sugar transport-related sRNA regulator N-term DA68_01020 PF07690 Major Facilitator Superfamily DA68_01030 PF01965 DJ-1/PfpI family DA68_01045 PF13520 Amino acid permease DA68_01050 PF01177 Asp/Glu/Hydantoin racemase DA68_01060 PF00171 Aldehyde dehydrogenase family DA68_01065 PF00005 ABC transporter DA68_01065 PF00664 ABC transporter transmembrane region DA68_01070 PF00005 ABC transporter DA68_01070 PF00664 ABC transporter transmembrane region DA68_01075 PF00497 Bacterial extracellular solute-binding proteins, family 3 DA68_01080 PF00528 Binding-protein-dependent transport system inner membrane component DA68_01085 PF00005 ABC transporter DA68_01090 PF00269 Small, acid-soluble spore proteins, alpha/beta type DA68_01100 PF14398 YheC/D like ATP-grasp DA68_01110 PF04286 Protein of unknown function (DUF445) DA68_01115 PF06133 Control of competence regulator ComK, YlbF/YmcA DA68_01130 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DA68_01130 PF00205 Thiamine pyrophosphate enzyme, central domain DA68_01130 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DA68_01135 PF03306 Alpha-acetolactate decarboxylase DA68_01140 PF02245 Methylpurine-DNA glycosylase (MPG) DA68_01150 PF04650 YSIRK type signal peptide DA68_01150 PF17210 SdrD B-like domain DA68_01150 PF17961 Bacterial Ig domain DA68_01150 PF00746 LPXTG cell wall anchor motif DA68_01150 PF10425 C-terminus of bacterial fibrinogen-binding adhesin DA68_01155 PF01471 Putative peptidoglycan binding domain DA68_01155 PF01510 N-acetylmuramoyl-L-alanine amidase DA68_01160 PF04055 Radical SAM superfamily DA68_01165 PF00501 AMP-binding enzyme DA68_01165 PF13193 AMP-binding enzyme C-terminal domain DA68_01180 PF01740 STAS domain DA68_01180 PF00916 Sulfate permease family DA68_01185 PF01943 Polysaccharide biosynthesis protein DA68_01185 PF14667 Polysaccharide biosynthesis C-terminal domain DA68_01205 PF00378 Enoyl-CoA hydratase/isomerase DA68_01225 PF05343 M42 glutamyl aminopeptidase DA68_01230 PF01520 N-acetylmuramoyl-L-alanine amidase DA68_01230 PF00395 S-layer homology domain DA68_01240 PF11121 Protein of unknown function (DUF2639) DA68_01245 PF05544 Proline racemase DA68_01250 PF02423 Ornithine cyclodeaminase/mu-crystallin family DA68_01260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DA68_01265 PF00528 Binding-protein-dependent transport system inner membrane component DA68_01270 PF12911 N-terminal TM domain of oligopeptide transport permease C DA68_01270 PF00528 Binding-protein-dependent transport system inner membrane component DA68_01275 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DA68_01275 PF00005 ABC transporter DA68_01280 PF00005 ABC transporter DA68_01280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DA68_01305 PF16123 Hydroxyacylglutathione hydrolase C-terminus DA68_01305 PF00753 Metallo-beta-lactamase superfamily DA68_01325 PF06013 Proteins of 100 residues with WXG DA68_01340 PF14436 Bacterial EndoU nuclease DA68_01340 PF04740 LXG domain of WXG superfamily DA68_01420 PF00083 Sugar (and other) transporter DA68_01425 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DA68_01425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_01430 PF08279 HTH domain DA68_01430 PF12431 Transcriptional regulator DA68_01430 PF00072 Response regulator receiver domain DA68_01435 PF03401 Tripartite tricarboxylate transporter family receptor DA68_01445 PF00589 Phage integrase family DA68_01450 PF00145 C-5 cytosine-specific DNA methylase DA68_01495 PF03796 DnaB-like helicase C terminal domain DA68_01495 PF00772 DnaB-like helicase N terminal domain DA68_01510 PF01925 Sulfite exporter TauE/SafE DA68_01520 PF02954 Bacterial regulatory protein, Fis family DA68_01520 PF13426 PAS domain DA68_01520 PF00158 Sigma-54 interaction domain DA68_01525 PF07722 Peptidase C26 DA68_01530 PF03606 C4-dicarboxylate anaerobic carrier DA68_01540 PF07690 Major Facilitator Superfamily DA68_01555 PF13302 Acetyltransferase (GNAT) domain DA68_01635 PF13026 Protein of unknown function (DUF3887) DA68_01635 PF12146 Serine aminopeptidase, S33 DA68_01680 PF01066 CDP-alcohol phosphatidyltransferase DA68_01700 PF02733 Dak1 domain DA68_01710 PF02733 Dak1 domain DA68_01740 PF00395 S-layer homology domain DA68_01770 PF11181 Heat induced stress protein YflT DA68_01795 PF01740 STAS domain DA68_01800 PF13581 Histidine kinase-like ATPase domain DA68_01805 PF04542 Sigma-70 region 2 DA68_01805 PF04545 Sigma-70, region 4 DA68_01805 PF04539 Sigma-70 region 3 DA68_01815 PF13426 PAS domain DA68_01815 PF07228 Stage II sporulation protein E (SpoIIE) DA68_01820 PF03705 CheR methyltransferase, all-alpha domain DA68_01820 PF01739 CheR methyltransferase, SAM binding domain DA68_01825 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DA68_01825 PF00672 HAMP domain DA68_01825 PF00072 Response regulator receiver domain DA68_01825 PF01627 Hpt domain DA68_01825 PF00512 His Kinase A (phospho-acceptor) domain DA68_01825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_01845 PF01906 Putative heavy-metal-binding DA68_01855 PF00107 Zinc-binding dehydrogenase DA68_01855 PF08240 Alcohol dehydrogenase GroES-like domain DA68_01860 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family DA68_01865 PF11121 Protein of unknown function (DUF2639) DA68_01880 PF00149 Calcineurin-like phosphoesterase DA68_01885 PF13514 AAA domain DA68_01890 PF01966 HD domain DA68_01890 PF01336 OB-fold nucleic acid binding domain DA68_01895 PF00144 Beta-lactamase DA68_01910 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DA68_01915 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DA68_01920 PF18801 response regulator aspartate phosphatase H, N terminal DA68_01920 PF17874 MalT-like TPR region DA68_01930 PF00561 alpha/beta hydrolase fold DA68_01930 PF08386 TAP-like protein DA68_01935 PF14147 Sporulation protein YhaL DA68_01950 PF00190 Cupin DA68_01955 PF01381 Helix-turn-helix DA68_01960 PF04309 Glycerol-3-phosphate responsive antiterminator DA68_01965 PF00230 Major intrinsic protein DA68_01970 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DA68_01970 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DA68_01975 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DA68_01975 PF01266 FAD dependent oxidoreductase DA68_01980 PF03551 Transcriptional regulator PadR-like family DA68_02000 PF01098 Cell cycle protein DA68_02005 PF13538 UvrD-like helicase C-terminal domain DA68_02025 PF01047 MarR family DA68_02030 PF12732 YtxH-like protein DA68_02035 PF01230 HIT domain DA68_02040 PF00005 ABC transporter DA68_02045 PF05975 Bacterial ABC transporter protein EcsB DA68_02050 PF12787 EcsC protein family DA68_02055 PF17934 Tetracyclin repressor-like, C-terminal domain DA68_02055 PF00440 Bacterial regulatory proteins, tetR family DA68_02065 PF03703 Bacterial PH domain DA68_02070 PF03703 Bacterial PH domain DA68_02095 PF10014 2OG-Fe dioxygenase DA68_02105 PF00892 EamA-like transporter family DA68_02110 PF03703 Bacterial PH domain DA68_02115 PF03703 Bacterial PH domain DA68_02120 PF03992 Antibiotic biosynthesis monooxygenase DA68_02125 PF00912 Transglycosylase DA68_02125 PF00905 Penicillin binding protein transpeptidase domain DA68_02130 PF01208 Uroporphyrinogen decarboxylase (URO-D) DA68_02165 PF03965 Penicillinase repressor DA68_02175 PF17932 Tetracyclin repressor-like, C-terminal domain DA68_02175 PF00440 Bacterial regulatory proteins, tetR family DA68_02200 PF13302 Acetyltransferase (GNAT) domain DA68_02205 PF00356 Bacterial regulatory proteins, lacI family DA68_02210 PF14149 YhfH-like protein DA68_02215 PF12706 Beta-lactamase superfamily domain DA68_02220 PF03099 Biotin/lipoate A/B protein ligase family DA68_02220 PF10437 Bacterial lipoate protein ligase C-terminus DA68_02230 PF00501 AMP-binding enzyme DA68_02230 PF13193 AMP-binding enzyme C-terminal domain DA68_02235 PF05593 RHS Repeat DA68_02310 PF07968 Leukocidin/Hemolysin toxin family DA68_02320 PF12146 Serine aminopeptidase, S33 DA68_02325 PF00149 Calcineurin-like phosphoesterase DA68_02330 PF01966 HD domain DA68_02340 PF04542 Sigma-70 region 2 DA68_02340 PF08281 Sigma-70, region 4 DA68_02345 PF06445 GyrI-like small molecule binding domain DA68_02345 PF12833 Helix-turn-helix domain DA68_02355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_02355 PF00512 His Kinase A (phospho-acceptor) domain DA68_02360 PF00072 Response regulator receiver domain DA68_02360 PF00486 Transcriptional regulatory protein, C terminal DA68_02380 PF16491 CAAX prenyl protease N-terminal, five membrane helices DA68_02380 PF01435 Peptidase family M48 DA68_02385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA68_02385 PF00672 HAMP domain DA68_02385 PF02743 Cache domain DA68_02390 PF00395 S-layer homology domain DA68_02390 PF02018 Carbohydrate binding domain DA68_02390 PF06452 Carbohydrate family 9 binding domain-like DA68_02390 PF00331 Glycosyl hydrolase family 10 DA68_02400 PF01274 Malate synthase DA68_02405 PF00463 Isocitrate lyase family DA68_02420 PF00313 'Cold-shock' DNA-binding domain DA68_02440 PF09335 SNARE associated Golgi protein DA68_02445 PF10502 Signal peptidase, peptidase S26 DA68_02450 PF13361 UvrD-like helicase C-terminal domain DA68_02450 PF12705 PD-(D/E)XK nuclease superfamily DA68_02455 PF00580 UvrD/REP helicase N-terminal domain DA68_02455 PF12705 PD-(D/E)XK nuclease superfamily DA68_02455 PF13361 UvrD-like helicase C-terminal domain DA68_02460 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DA68_02460 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DA68_02460 PF01000 RNA polymerase Rpb3/RpoA insert domain DA68_02465 PF10676 Spore germination protein gerPA/gerPF DA68_02470 PF10970 Spore germination protein GerPE DA68_02480 PF10737 Spore germination protein GerPC DA68_02485 PF10803 Spore germination GerPB DA68_02490 PF10676 Spore germination protein gerPA/gerPF DA68_02495 PF09388 Spo0E like sporulation regulatory protein DA68_02500 PF01557 Fumarylacetoacetate (FAA) hydrolase family DA68_02510 PF00202 Aminotransferase class-III DA68_02525 PF13537 Glutamine amidotransferase domain DA68_02525 PF00733 Asparagine synthase DA68_02535 PF00199 Catalase DA68_02535 PF06628 Catalase-related immune-responsive DA68_02540 PF00909 Ammonium Transporter Family DA68_02545 PF00128 Alpha amylase, catalytic domain DA68_02550 PF04461 Protein of unknown function (DUF520) DA68_02555 PF13509 S1 domain DA68_02555 PF17783 CvfB-like winged helix domain DA68_02565 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DA68_02565 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DA68_02570 PF12758 Protein of unknown function (DUF3813) DA68_02585 PF14168 YjzC-like protein DA68_02590 PF10431 C-terminal, D2-small domain, of ClpB protein DA68_02590 PF17871 AAA lid domain DA68_02590 PF07724 AAA domain (Cdc48 subfamily) DA68_02590 PF02861 Clp amino terminal domain, pathogenicity island component DA68_02590 PF00004 ATPase family associated with various cellular activities (AAA) DA68_02610 PF10815 ComZ DA68_02615 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DA68_02615 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DA68_02620 PF02801 Beta-ketoacyl synthase, C-terminal domain DA68_02620 PF00109 Beta-ketoacyl synthase, N-terminal domain DA68_02625 PF10026 Predicted Zn-dependent protease (DUF2268) DA68_02630 PF12227 Protein of unknown function (DUF3603) DA68_02640 PF00579 tRNA synthetases class I (W and Y) DA68_02650 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DA68_02655 PF00528 Binding-protein-dependent transport system inner membrane component DA68_02660 PF00528 Binding-protein-dependent transport system inner membrane component DA68_02660 PF12911 N-terminal TM domain of oligopeptide transport permease C DA68_02665 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DA68_02665 PF00005 ABC transporter DA68_02670 PF00005 ABC transporter DA68_02670 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DA68_02675 PF01554 MatE DA68_02680 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DA68_02690 PF03960 ArsC family DA68_02695 PF03741 Integral membrane protein TerC family DA68_02700 PF05389 Negative regulator of genetic competence (MecA) DA68_02705 PF13091 PLD-like domain DA68_02705 PF13396 Phospholipase_D-nuclease N-terminal DA68_02715 PF01432 Peptidase family M3 DA68_02715 PF08439 Oligopeptidase F DA68_02725 PF01152 Bacterial-like globin DA68_02730 PF01928 CYTH domain DA68_02740 PF04607 Region found in RelA / SpoT proteins DA68_02745 PF01513 ATP-NAD kinase DA68_02750 PF00849 RNA pseudouridylate synthase DA68_02760 PF00149 Calcineurin-like phosphoesterase DA68_02770 PF00535 Glycosyl transferase family 2 DA68_02775 PF08241 Methyltransferase domain DA68_02780 PF05711 Macrocin-O-methyltransferase (TylF) DA68_02790 PF00535 Glycosyl transferase family 2 DA68_02790 PF13181 Tetratricopeptide repeat DA68_02810 PF00483 Nucleotidyl transferase DA68_02815 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DA68_02820 PF16363 GDP-mannose 4,6 dehydratase DA68_02825 PF04321 RmlD substrate binding domain DA68_02845 PF07098 Protein of unknown function (DUF1360) DA68_02865 PF13361 UvrD-like helicase C-terminal domain DA68_02865 PF00580 UvrD/REP helicase N-terminal domain DA68_02870 PF13673 Acetyltransferase (GNAT) domain DA68_02880 PF00756 Putative esterase DA68_02895 PF02368 Bacterial Ig-like domain (group 2) DA68_02900 PF00474 Sodium:solute symporter family DA68_02910 PF00117 Glutamine amidotransferase class-I DA68_02910 PF02885 Glycosyl transferase family, helical bundle domain DA68_02910 PF00591 Glycosyl transferase family, a/b domain DA68_02915 PF02885 Glycosyl transferase family, helical bundle domain DA68_02915 PF00591 Glycosyl transferase family, a/b domain DA68_02920 PF00218 Indole-3-glycerol phosphate synthase DA68_02925 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DA68_02930 PF00291 Pyridoxal-phosphate dependent enzyme DA68_02935 PF00290 Tryptophan synthase alpha chain DA68_02945 PF02652 L-lactate permease DA68_02950 PF10042 Uncharacterized conserved protein (DUF2278) DA68_02975 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA68_02975 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DA68_02985 PF00881 Nitroreductase family DA68_03000 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DA68_03000 PF00364 Biotin-requiring enzyme DA68_03000 PF02817 e3 binding domain DA68_03005 PF02779 Transketolase, pyrimidine binding domain DA68_03005 PF00676 Dehydrogenase E1 component DA68_03005 PF16870 2-oxoglutarate dehydrogenase C-terminal DA68_03010 PF01381 Helix-turn-helix DA68_03060 PF00768 D-alanyl-D-alanine carboxypeptidase DA68_03060 PF07943 Penicillin-binding protein 5, C-terminal domain DA68_03070 PF12389 Camelysin metallo-endopeptidase DA68_03080 PF12389 Camelysin metallo-endopeptidase DA68_03085 PF01381 Helix-turn-helix DA68_03085 PF08671 Anti-repressor SinI DA68_03095 PF05547 Immune inhibitor A peptidase M6 DA68_03100 PF00171 Aldehyde dehydrogenase family DA68_03105 PF00005 ABC transporter DA68_03105 PF08402 TOBE domain DA68_03110 PF00528 Binding-protein-dependent transport system inner membrane component DA68_03115 PF00528 Binding-protein-dependent transport system inner membrane component DA68_03120 PF13416 Bacterial extracellular solute-binding protein DA68_03125 PF01569 PAP2 superfamily DA68_03130 PF03176 MMPL family DA68_03140 PF01479 S4 domain DA68_03140 PF00849 RNA pseudouridylate synthase DA68_03150 PF00188 Cysteine-rich secretory protein family DA68_03155 PF02754 Cysteine-rich domain DA68_03155 PF13183 4Fe-4S dicluster domain DA68_03160 PF01565 FAD binding domain DA68_03160 PF02913 FAD linked oxidases, C-terminal domain DA68_03165 PF05651 Putative sugar diacid recognition DA68_03165 PF13556 PucR C-terminal helix-turn-helix domain DA68_03165 PF17853 GGDEF-like domain DA68_03175 PF00486 Transcriptional regulatory protein, C terminal DA68_03175 PF00072 Response regulator receiver domain DA68_03180 PF00989 PAS fold DA68_03180 PF00512 His Kinase A (phospho-acceptor) domain DA68_03180 PF18698 Histidine kinase sensor domain DA68_03180 PF00672 HAMP domain DA68_03180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_03185 PF00392 Bacterial regulatory proteins, gntR family DA68_03185 PF07729 FCD domain DA68_03190 PF02754 Cysteine-rich domain DA68_03195 PF02589 LUD domain DA68_03195 PF13183 4Fe-4S dicluster domain DA68_03195 PF11870 Domain of unknown function (DUF3390) DA68_03200 PF02589 LUD domain DA68_03205 PF06750 Bacterial Peptidase A24 N-terminal domain DA68_03205 PF01478 Type IV leader peptidase family DA68_03215 PF01226 Formate/nitrite transporter DA68_03220 PF03741 Integral membrane protein TerC family DA68_03225 PF02386 Cation transport protein DA68_03230 PF00269 Small, acid-soluble spore proteins, alpha/beta type DA68_03235 PF01575 MaoC like domain DA68_03260 PF00561 alpha/beta hydrolase fold DA68_03270 PF02386 Cation transport protein DA68_03290 PF08402 TOBE domain DA68_03290 PF00005 ABC transporter DA68_03295 PF00528 Binding-protein-dependent transport system inner membrane component DA68_03300 PF13419 Haloacid dehalogenase-like hydrolase DA68_03305 PF00266 Aminotransferase class-V DA68_03315 PF00455 DeoR C terminal sensor domain DA68_03315 PF08220 DeoR-like helix-turn-helix domain DA68_03330 PF00596 Class II Aldolase and Adducin N-terminal domain DA68_03340 PF04748 Divergent polysaccharide deacetylase DA68_03345 PF09388 Spo0E like sporulation regulatory protein DA68_03350 PF00512 His Kinase A (phospho-acceptor) domain DA68_03350 PF02743 Cache domain DA68_03350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_03355 PF01047 MarR family DA68_03365 PF12867 DinB superfamily DA68_03375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_03375 PF00512 His Kinase A (phospho-acceptor) domain DA68_03375 PF00989 PAS fold DA68_03375 PF13188 PAS domain DA68_03375 PF13426 PAS domain DA68_03380 PF06508 Queuosine biosynthesis protein QueC DA68_03385 PF01242 6-pyruvoyl tetrahydropterin synthase DA68_03390 PF04055 Radical SAM superfamily DA68_03395 PF14489 QueF-like protein DA68_03400 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) DA68_03430 PF07972 NrdI Flavodoxin like DA68_03435 PF00317 Ribonucleotide reductase, all-alpha domain DA68_03435 PF02867 Ribonucleotide reductase, barrel domain DA68_03435 PF08343 Ribonucleotide reductase N-terminal DA68_03445 PF13392 HNH endonuclease DA68_03455 PF00392 Bacterial regulatory proteins, gntR family DA68_03460 PF00005 ABC transporter DA68_03470 PF00005 ABC transporter DA68_03490 PF01037 Lrp/AsnC ligand binding domain DA68_03500 PF00857 Isochorismatase family DA68_03510 PF17676 LD-carboxypeptidase C-terminal domain DA68_03510 PF02016 LD-carboxypeptidase N-terminal domain DA68_03515 PF03060 Nitronate monooxygenase DA68_03520 PF04914 DltD protein DA68_03525 PF00550 Phosphopantetheine attachment site DA68_03530 PF03062 MBOAT, membrane-bound O-acyltransferase family DA68_03535 PF00501 AMP-binding enzyme DA68_03535 PF13193 AMP-binding enzyme C-terminal domain DA68_03545 PF07687 Peptidase dimerisation domain DA68_03545 PF01546 Peptidase family M20/M25/M40 DA68_03555 PF00258 Flavodoxin DA68_03585 PF01554 MatE DA68_03590 PF02673 Bacitracin resistance protein BacA DA68_03605 PF01047 MarR family DA68_03615 PF00375 Sodium:dicarboxylate symporter family DA68_03620 PF02386 Cation transport protein DA68_03630 PF09579 Sporulation protein YtfJ (Spore_YtfJ) DA68_03640 PF03698 Uncharacterised protein family (UPF0180) DA68_03650 PF01063 Amino-transferase class IV DA68_03655 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DA68_03655 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DA68_03655 PF00205 Thiamine pyrophosphate enzyme, central domain DA68_03660 PF01842 ACT domain DA68_03660 PF10369 Small subunit of acetolactate synthase DA68_03665 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DA68_03665 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DA68_03670 PF08502 LeuA allosteric (dimerisation) domain DA68_03670 PF00682 HMGL-like DA68_03675 PF00180 Isocitrate/isopropylmalate dehydrogenase DA68_03680 PF00330 Aconitase family (aconitate hydratase) DA68_03685 PF00694 Aconitase C-terminal domain DA68_03690 PF13393 Histidyl-tRNA synthetase DA68_03695 PF01634 ATP phosphoribosyltransferase DA68_03700 PF00815 Histidinol dehydrogenase DA68_03705 PF00475 Imidazoleglycerol-phosphate dehydratase DA68_03710 PF00117 Glutamine amidotransferase class-I DA68_03715 PF00977 Histidine biosynthesis protein DA68_03720 PF00977 Histidine biosynthesis protein DA68_03725 PF01502 Phosphoribosyl-AMP cyclohydrolase DA68_03730 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DA68_03735 PF02811 PHP domain DA68_03745 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DA68_03745 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DA68_03750 PF01066 CDP-alcohol phosphatidyltransferase DA68_03755 PF00884 Sulfatase DA68_03765 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DA68_03765 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DA68_03775 PF01507 Phosphoadenosine phosphosulfate reductase family DA68_03780 PF14306 PUA-like domain DA68_03780 PF01747 ATP-sulfurylase DA68_03790 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DA68_03790 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DA68_03800 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DA68_03805 PF01903 CbiX DA68_03815 PF00209 Sodium:neurotransmitter symporter family DA68_03825 PF00375 Sodium:dicarboxylate symporter family DA68_03835 PF03553 Na+/H+ antiporter family DA68_03850 PF09922 Cell wall-active antibiotics response 4TMS YvqF DA68_03855 PF00672 HAMP domain DA68_03855 PF07730 Histidine kinase DA68_03855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_03860 PF00196 Bacterial regulatory proteins, luxR family DA68_03860 PF00072 Response regulator receiver domain DA68_03870 PF05525 Branched-chain amino acid transport protein DA68_03880 PF01209 ubiE/COQ5 methyltransferase family DA68_03905 PF00175 Oxidoreductase NAD-binding domain DA68_03905 PF00042 Globin DA68_03905 PF00970 Oxidoreductase FAD-binding domain DA68_03920 PF01925 Sulfite exporter TauE/SafE DA68_03925 PF01384 Phosphate transporter family DA68_03930 PF01865 Protein of unknown function DUF47 DA68_03935 PF00905 Penicillin binding protein transpeptidase domain DA68_03935 PF00912 Transglycosylase DA68_03950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_03950 PF00989 PAS fold DA68_03950 PF00512 His Kinase A (phospho-acceptor) domain DA68_03955 PF01904 Protein of unknown function DUF72 DA68_03965 PF00589 Phage integrase family DA68_03970 PF16736 Single Cache-like DA68_03970 PF00989 PAS fold DA68_03970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_03970 PF00512 His Kinase A (phospho-acceptor) domain DA68_03975 PF01048 Phosphorylase superfamily DA68_03985 PF03706 Lysylphosphatidylglycerol synthase TM region DA68_03985 PF09924 Uncharacterised conserved protein (DUF2156) DA68_04000 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DA68_04000 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DA68_04005 PF00768 D-alanyl-D-alanine carboxypeptidase DA68_04005 PF07943 Penicillin-binding protein 5, C-terminal domain DA68_04010 PF07670 Nucleoside recognition DA68_04015 PF07670 Nucleoside recognition DA68_04020 PF00849 RNA pseudouridylate synthase DA68_04020 PF01479 S4 domain DA68_04025 PF00578 AhpC/TSA family DA68_04030 PF05140 ResB-like family DA68_04035 PF01578 Cytochrome C assembly protein DA68_04040 PF00486 Transcriptional regulatory protein, C terminal DA68_04040 PF00072 Response regulator receiver domain DA68_04045 PF00672 HAMP domain DA68_04045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_04045 PF18698 Histidine kinase sensor domain DA68_04045 PF00512 His Kinase A (phospho-acceptor) domain DA68_04045 PF00989 PAS fold DA68_04050 PF01923 Cobalamin adenosyltransferase DA68_04065 PF12822 ECF transporter, substrate-specific component DA68_04080 PF00271 Helicase conserved C-terminal domain DA68_04080 PF00270 DEAD/DEAH box helicase DA68_04085 PF02517 CPBP intramembrane metalloprotease DA68_04095 PF00149 Calcineurin-like phosphoesterase DA68_04100 PF13411 MerR HTH family regulatory protein DA68_04100 PF02607 B12 binding domain DA68_04100 PF02310 B12 binding domain DA68_04105 PF05389 Negative regulator of genetic competence (MecA) DA68_04110 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DA68_04110 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DA68_04135 PF17763 Glutaminase/Asparaginase C-terminal domain DA68_04135 PF00710 Asparaginase, N-terminal DA68_04140 PF02224 Cytidylate kinase DA68_04145 PF00575 S1 RNA binding domain DA68_04150 PF01070 FMN-dependent dehydrogenase DA68_04155 PF14140 YpzI-like protein DA68_04165 PF14045 YIEGIA protein DA68_04175 PF01926 50S ribosome-binding GTPase DA68_04175 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DA68_04180 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DA68_04180 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DA68_04190 PF10966 Protein of unknown function (DUF2768) DA68_04200 PF09547 Stage IV sporulation protein A (spore_IV_A) DA68_04205 PF00216 Bacterial DNA-binding protein DA68_04210 PF01227 GTP cyclohydrolase I DA68_04215 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 DA68_04220 PF01209 ubiE/COQ5 methyltransferase family DA68_04225 PF00348 Polyprenyl synthetase DA68_04230 PF00334 Nucleoside diphosphate kinase DA68_04235 PF01264 Chorismate synthase DA68_04240 PF01761 3-dehydroquinate synthase DA68_04245 PF00155 Aminotransferase class I and II DA68_04255 PF08864 UPF0302 domain DA68_04255 PF08858 IDEAL domain DA68_04260 PF10673 Protein of unknown function (DUF2487) DA68_04265 PF00355 Rieske [2Fe-2S] domain DA68_04270 PF00033 Cytochrome b/b6/petB DA68_04275 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DA68_04275 PF00032 Cytochrome b(C-terminal)/b6/petD DA68_04280 PF07187 Protein of unknown function (DUF1405) DA68_04290 PF09577 Sporulation protein YpjB (SpoYpjB) DA68_04295 PF04298 Putative neutral zinc metallopeptidase DA68_04305 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DA68_04305 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DA68_04310 PF03819 MazG nucleotide pyrophosphohydrolase domain DA68_04315 PF01113 Dihydrodipicolinate reductase, N-terminus DA68_04315 PF05173 Dihydrodipicolinate reductase, C-terminus DA68_04320 PF02142 MGS-like domain DA68_04325 PF02585 GlcNAc-PI de-N-acetylase DA68_04330 PF13439 Glycosyltransferase Family 4 DA68_04330 PF00534 Glycosyl transferases group 1 DA68_04335 PF13735 tRNA nucleotidyltransferase domain 2 putative DA68_04335 PF12627 Probable RNA and SrmB- binding site of polymerase A DA68_04335 PF01743 Poly A polymerase head domain DA68_04340 PF03099 Biotin/lipoate A/B protein ligase family DA68_04340 PF02237 Biotin protein ligase C terminal domain DA68_04340 PF08279 HTH domain DA68_04350 PF02548 Ketopantoate hydroxymethyltransferase DA68_04355 PF02569 Pantoate-beta-alanine ligase DA68_04360 PF02261 Aspartate decarboxylase DA68_04365 PF00929 Exonuclease DA68_04365 PF04851 Type III restriction enzyme, res subunit DA68_04365 PF13307 Helicase C-terminal domain DA68_04370 PF14084 Protein of unknown function (DUF4264) DA68_04380 PF00155 Aminotransferase class I and II DA68_04385 PF07261 Replication initiation and membrane attachment DA68_04390 PF00633 Helix-hairpin-helix motif DA68_04390 PF00730 HhH-GPD superfamily base excision DNA repair protein DA68_04390 PF10576 Iron-sulfur binding domain of endonuclease III DA68_04400 PF00905 Penicillin binding protein transpeptidase domain DA68_04400 PF00912 Transglycosylase DA68_04405 PF03838 Recombination protein U DA68_04410 PF10720 Protein of unknown function (DUF2515) DA68_04440 PF06908 YspA SLOG family DA68_04445 PF05103 DivIVA protein DA68_04455 PF01170 Putative RNA methylase family UPF0020 DA68_04455 PF02926 THUMP domain DA68_04465 PF13307 Helicase C-terminal domain DA68_04470 PF02074 Carboxypeptidase Taq (M32) metallopeptidase DA68_04480 PF00557 Metallopeptidase family M24 DA68_04485 PF00156 Phosphoribosyl transferase domain DA68_04490 PF00860 Permease family DA68_04495 PF04235 Protein of unknown function (DUF418) DA68_04500 PF00350 Dynamin family DA68_04510 PF00583 Acetyltransferase (GNAT) family DA68_04515 PF10752 Protein of unknown function (DUF2533) DA68_04520 PF00581 Rhodanese-like domain DA68_04555 PF00689 Cation transporting ATPase, C-terminus DA68_04555 PF00690 Cation transporter/ATPase, N-terminus DA68_04560 PF01367 5'-3' exonuclease, C-terminal SAM fold DA68_04560 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DA68_04575 PF13807 G-rich domain on putative tyrosine kinase DA68_04575 PF02706 Chain length determinant protein DA68_04585 PF02397 Bacterial sugar transferase DA68_04600 PF00535 Glycosyl transferase family 2 DA68_04605 PF13439 Glycosyltransferase Family 4 DA68_04605 PF00534 Glycosyl transferases group 1 DA68_04620 PF13673 Acetyltransferase (GNAT) domain DA68_04620 PF18014 Acetyltransferase (GNAT) domain DA68_04640 PF13456 Reverse transcriptase-like DA68_04645 PF01263 Aldose 1-epimerase DA68_04670 PF00313 'Cold-shock' DNA-binding domain DA68_04675 PF08892 YqcI/YcgG family DA68_04680 PF01810 LysE type translocator DA68_04700 PF00474 Sodium:solute symporter family DA68_04705 PF00202 Aminotransferase class-III DA68_04715 PF00999 Sodium/hydrogen exchanger family DA68_04720 PF17770 Ribonuclease J C-terminal domain DA68_04720 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DA68_04720 PF00753 Metallo-beta-lactamase superfamily DA68_04725 PF13411 MerR HTH family regulatory protein DA68_04725 PF06445 GyrI-like small molecule binding domain DA68_04735 PF04239 Protein of unknown function (DUF421) DA68_04740 PF02698 DUF218 domain DA68_04750 PF00881 Nitroreductase family DA68_04780 PF17209 Hfq protein DA68_04790 PF01618 MotA/TolQ/ExbB proton channel family DA68_04795 PF00691 OmpA family DA68_04795 PF13677 Membrane MotB of proton-channel complex MotA/MotB DA68_04800 PF00072 Response regulator receiver domain DA68_04805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_04805 PF01627 Hpt domain DA68_04805 PF07194 P2 response regulator binding domain DA68_04805 PF01584 CheW-like domain DA68_04805 PF02895 Signal transducing histidine kinase, homodimeric domain DA68_04810 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DA68_04810 PF04509 CheC-like family DA68_04825 PF01739 CheR methyltransferase, SAM binding domain DA68_04825 PF03705 CheR methyltransferase, all-alpha domain DA68_04845 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DA68_04845 PF00460 Flagella basal body rod protein DA68_04850 PF00669 Bacterial flagellin N-terminal helical region DA68_04850 PF00700 Bacterial flagellin C-terminal helical region DA68_04870 PF00460 Flagella basal body rod protein DA68_04875 PF00460 Flagella basal body rod protein DA68_04875 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DA68_04880 PF02049 Flagellar hook-basal body complex protein FliE DA68_04885 PF01514 Secretory protein of YscJ/FliF family DA68_04885 PF08345 Flagellar M-ring protein C-terminal DA68_04890 PF01706 FliG C-terminal domain DA68_04890 PF14841 FliG middle domain DA68_04890 PF14842 FliG N-terminal domain DA68_04900 PF18269 T3SS EscN ATPase C-terminal domain DA68_04900 PF02874 ATP synthase alpha/beta family, beta-barrel domain DA68_04900 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DA68_04920 PF00460 Flagella basal body rod protein DA68_04920 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DA68_04920 PF07559 Flagellar basal body protein FlaE DA68_04935 PF00072 Response regulator receiver domain DA68_04935 PF01584 CheW-like domain DA68_04940 PF12181 DNA binding domain of the motility gene repressor (MogR) DA68_04945 PF00700 Bacterial flagellin C-terminal helical region DA68_04945 PF00669 Bacterial flagellin N-terminal helical region DA68_04950 PF00669 Bacterial flagellin N-terminal helical region DA68_04950 PF00700 Bacterial flagellin C-terminal helical region DA68_04955 PF01464 Transglycosylase SLT domain DA68_04965 PF02154 Flagellar motor switch protein FliM DA68_04965 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DA68_04970 PF04509 CheC-like family DA68_04970 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DA68_04980 PF00813 FliP family DA68_04985 PF01313 Bacterial export proteins, family 3 DA68_04995 PF01312 FlhB HrpN YscU SpaS Family DA68_05000 PF00771 FHIPEP family DA68_05005 PF00448 SRP54-type protein, GTPase domain DA68_05010 PF00460 Flagella basal body rod protein DA68_05010 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DA68_05015 PF01411 tRNA synthetases class II (A) DA68_05015 PF02272 DHHA1 domain DA68_05015 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DA68_05050 PF03992 Antibiotic biosynthesis monooxygenase DA68_05055 PF08141 Small acid-soluble spore protein H family DA68_05080 PF00005 ABC transporter DA68_05080 PF08402 TOBE domain DA68_05090 PF00528 Binding-protein-dependent transport system inner membrane component DA68_05105 PF10787 Uncharacterised protein from bacillus cereus group DA68_05120 PF00300 Histidine phosphatase superfamily (branch 1) DA68_05130 PF00561 alpha/beta hydrolase fold DA68_05140 PF01047 MarR family DA68_05150 PF13537 Glutamine amidotransferase domain DA68_05150 PF00733 Asparagine synthase DA68_05170 PF16916 Dimerisation domain of Zinc Transporter DA68_05170 PF01545 Cation efflux family DA68_05180 PF07729 FCD domain DA68_05180 PF00392 Bacterial regulatory proteins, gntR family DA68_05185 PF00892 EamA-like transporter family DA68_05195 PF07683 Cobalamin synthesis protein cobW C-terminal domain DA68_05195 PF02492 CobW/HypB/UreG, nucleotide-binding domain DA68_05200 PF03773 Predicted permease DA68_05215 PF03553 Na+/H+ antiporter family DA68_05220 PF13411 MerR HTH family regulatory protein DA68_05230 PF10415 Fumarase C C-terminus DA68_05230 PF00206 Lyase DA68_05245 PF01554 MatE DA68_05250 PF03575 Peptidase family S51 DA68_05270 PF00578 AhpC/TSA family DA68_05295 PF00291 Pyridoxal-phosphate dependent enzyme DA68_05300 PF04286 Protein of unknown function (DUF445) DA68_05325 PF00196 Bacterial regulatory proteins, luxR family DA68_05325 PF00072 Response regulator receiver domain DA68_05330 PF13492 GAF domain DA68_05330 PF13185 GAF domain DA68_05330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_05330 PF07730 Histidine kinase DA68_05335 PF00005 ABC transporter DA68_05355 PF13091 PLD-like domain DA68_05360 PF00696 Amino acid kinase family DA68_05365 PF00375 Sodium:dicarboxylate symporter family DA68_05370 PF10415 Fumarase C C-terminus DA68_05370 PF00206 Lyase DA68_05375 PF03949 Malic enzyme, NAD binding domain DA68_05375 PF00390 Malic enzyme, N-terminal domain DA68_05380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_05385 PF08664 YcbB domain DA68_05385 PF00072 Response regulator receiver domain DA68_05390 PF04434 SWIM zinc finger DA68_05390 PF00176 SNF2 family N-terminal domain DA68_05390 PF00271 Helicase conserved C-terminal domain DA68_05405 PF03590 Aspartate-ammonia ligase DA68_05415 PF13840 ACT domain DA68_05415 PF00696 Amino acid kinase family DA68_05430 PF14158 YndJ-like protein DA68_05445 PF03976 Polyphosphate kinase 2 (PPK2) DA68_05450 PF10400 Virulence activator alpha C-term DA68_05450 PF03551 Transcriptional regulator PadR-like family DA68_05460 PF07690 Major Facilitator Superfamily DA68_05465 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DA68_05465 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DA68_05470 PF16360 GTP-binding GTPase Middle Region DA68_05470 PF01926 50S ribosome-binding GTPase DA68_05470 PF13167 GTP-binding GTPase N-terminal DA68_05475 PF07690 Major Facilitator Superfamily DA68_05480 PF00291 Pyridoxal-phosphate dependent enzyme DA68_05500 PF00209 Sodium:neurotransmitter symporter family DA68_05505 PF01522 Polysaccharide deacetylase DA68_05505 PF03422 Carbohydrate binding module (family 6) DA68_05505 PF00457 Glycosyl hydrolases family 11 DA68_05515 PF04239 Protein of unknown function (DUF421) DA68_05535 PF01625 Peptide methionine sulfoxide reductase DA68_05545 PF01063 Amino-transferase class IV DA68_05550 PF00205 Thiamine pyrophosphate enzyme, central domain DA68_05550 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DA68_05550 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DA68_05560 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DA68_05560 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DA68_05565 PF00920 Dehydratase family DA68_05570 PF00291 Pyridoxal-phosphate dependent enzyme DA68_05570 PF00585 C-terminal regulatory domain of Threonine dehydratase DA68_05580 PF09587 Bacterial capsule synthesis protein PGA_cap DA68_05595 PF07690 Major Facilitator Superfamily DA68_05600 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DA68_05610 PF00072 Response regulator receiver domain DA68_05610 PF04397 LytTr DNA-binding domain DA68_05615 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DA68_05615 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DA68_05620 PF13673 Acetyltransferase (GNAT) domain DA68_05630 PF01979 Amidohydrolase family DA68_05635 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DA68_05640 PF13302 Acetyltransferase (GNAT) domain DA68_05645 PF00072 Response regulator receiver domain DA68_05645 PF00486 Transcriptional regulatory protein, C terminal DA68_05650 PF00512 His Kinase A (phospho-acceptor) domain DA68_05650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_05660 PF01566 Natural resistance-associated macrophage protein DA68_05675 PF08546 Ketopantoate reductase PanE/ApbA C terminal DA68_05675 PF02558 Ketopantoate reductase PanE/ApbA DA68_05685 PF13520 Amino acid permease DA68_05695 PF05791 Bacillus haemolytic enterotoxin (HBL) DA68_05700 PF05791 Bacillus haemolytic enterotoxin (HBL) DA68_05710 PF01906 Putative heavy-metal-binding DA68_05720 PF00440 Bacterial regulatory proteins, tetR family DA68_05725 PF04198 Putative sugar-binding domain DA68_05730 PF01791 DeoC/LacD family aldolase DA68_05735 PF07662 Na+ dependent nucleoside transporter C-terminus DA68_05735 PF01773 Na+ dependent nucleoside transporter N-terminus DA68_05740 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DA68_05750 PF07301 Protein of unknown function (DUF1453) DA68_05755 PF05979 Bacterial protein of unknown function (DUF896) DA68_05775 PF05195 Aminopeptidase P, N-terminal domain DA68_05775 PF00557 Metallopeptidase family M24 DA68_05785 PF00394 Multicopper oxidase DA68_05785 PF07732 Multicopper oxidase DA68_05785 PF07731 Multicopper oxidase DA68_05810 PF02525 Flavodoxin-like fold DA68_05815 PF05525 Branched-chain amino acid transport protein DA68_05825 PF13115 YtkA-like DA68_05825 PF05425 Copper resistance protein D DA68_05825 PF04234 CopC domain DA68_05830 PF07987 Domain of unkown function (DUF1775) DA68_05835 PF00892 EamA-like transporter family DA68_05840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA68_05840 PF03466 LysR substrate binding domain DA68_05845 PF02082 Transcriptional regulator DA68_05850 PF01323 DSBA-like thioredoxin domain DA68_05855 PF00881 Nitroreductase family DA68_05865 PF01425 Amidase DA68_05870 PF01594 AI-2E family transporter DA68_05875 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DA68_05875 PF00056 lactate/malate dehydrogenase, NAD binding domain DA68_05880 PF01593 Flavin containing amine oxidoreductase DA68_05885 PF02492 CobW/HypB/UreG, nucleotide-binding domain DA68_05885 PF07683 Cobalamin synthesis protein cobW C-terminal domain DA68_05895 PF12399 Branched-chain amino acid ATP-binding cassette transporter DA68_05895 PF00005 ABC transporter DA68_05900 PF00005 ABC transporter DA68_05905 PF02653 Branched-chain amino acid transport system / permease component DA68_05915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA68_05915 PF03466 LysR substrate binding domain DA68_05935 PF01047 MarR family DA68_05945 PF01654 Cytochrome bd terminal oxidase subunit I DA68_05950 PF02322 Cytochrome bd terminal oxidase subunit II DA68_05955 PF00005 ABC transporter DA68_05955 PF00664 ABC transporter transmembrane region DA68_05960 PF00005 ABC transporter DA68_05960 PF00664 ABC transporter transmembrane region DA68_05970 PF00535 Glycosyl transferase family 2 DA68_05975 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DA68_05980 PF00132 Bacterial transferase hexapeptide (six repeats) DA68_06005 PF17676 LD-carboxypeptidase C-terminal domain DA68_06005 PF02016 LD-carboxypeptidase N-terminal domain DA68_06010 PF00768 D-alanyl-D-alanine carboxypeptidase DA68_06010 PF07943 Penicillin-binding protein 5, C-terminal domain DA68_06025 PF00877 NlpC/P60 family DA68_06025 PF01476 LysM domain DA68_06035 PF00664 ABC transporter transmembrane region DA68_06035 PF00005 ABC transporter DA68_06040 PF00072 Response regulator receiver domain DA68_06040 PF00486 Transcriptional regulatory protein, C terminal DA68_06045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_06045 PF00989 PAS fold DA68_06045 PF16736 Single Cache-like DA68_06045 PF00512 His Kinase A (phospho-acceptor) domain DA68_06050 PF00106 short chain dehydrogenase DA68_06055 PF04439 Streptomycin adenylyltransferase DA68_06060 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain DA68_06060 PF01522 Polysaccharide deacetylase DA68_06080 PF00742 Homoserine dehydrogenase DA68_06080 PF01842 ACT domain DA68_06080 PF03447 Homoserine dehydrogenase, NAD binding domain DA68_06085 PF00291 Pyridoxal-phosphate dependent enzyme DA68_06090 PF08544 GHMP kinases C terminal DA68_06090 PF00288 GHMP kinases N terminal domain DA68_06105 PF03816 Cell envelope-related transcriptional attenuator domain DA68_06115 PF00486 Transcriptional regulatory protein, C terminal DA68_06115 PF00072 Response regulator receiver domain DA68_06120 PF00512 His Kinase A (phospho-acceptor) domain DA68_06120 PF00989 PAS fold DA68_06120 PF16736 Single Cache-like DA68_06120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_06125 PF01522 Polysaccharide deacetylase DA68_06135 PF02308 MgtC family DA68_06140 PF00583 Acetyltransferase (GNAT) family DA68_06145 PF06276 Ferric iron reductase FhuF-like transporter DA68_06145 PF04183 IucA / IucC family DA68_06150 PF06276 Ferric iron reductase FhuF-like transporter DA68_06150 PF04183 IucA / IucC family DA68_06155 PF13193 AMP-binding enzyme C-terminal domain DA68_06155 PF00501 AMP-binding enzyme DA68_06170 PF01261 Xylose isomerase-like TIM barrel DA68_06175 PF00269 Small, acid-soluble spore proteins, alpha/beta type DA68_06180 PF07690 Major Facilitator Superfamily DA68_06185 PF01810 LysE type translocator DA68_06190 PF00392 Bacterial regulatory proteins, gntR family DA68_06190 PF00155 Aminotransferase class I and II DA68_06200 PF01734 Patatin-like phospholipase DA68_06225 PF13344 Haloacid dehalogenase-like hydrolase DA68_06225 PF00293 NUDIX domain DA68_06230 PF02540 NAD synthase DA68_06235 PF02687 FtsX-like permease family DA68_06240 PF18277 AbrB C-terminal domain DA68_06240 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DA68_06245 PF00082 Subtilase family DA68_06250 PF01022 Bacterial regulatory protein, arsR family DA68_06255 PF00248 Aldo/keto reductase family DA68_06260 PF07690 Major Facilitator Superfamily DA68_06285 PF03193 RsgA GTPase DA68_06290 PF02743 Cache domain DA68_06290 PF00672 HAMP domain DA68_06290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA68_06310 PF00210 Ferritin-like domain DA68_06325 PF00296 Luciferase-like monooxygenase DA68_06335 PF01593 Flavin containing amine oxidoreductase DA68_06340 PF13302 Acetyltransferase (GNAT) domain DA68_06345 PF00248 Aldo/keto reductase family DA68_06355 PF02492 CobW/HypB/UreG, nucleotide-binding domain DA68_06355 PF07683 Cobalamin synthesis protein cobW C-terminal domain DA68_06360 PF00583 Acetyltransferase (GNAT) family DA68_06365 PF01297 Zinc-uptake complex component A periplasmic DA68_06370 PF13460 NAD(P)H-binding DA68_06375 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DA68_06380 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DA68_06380 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DA68_06390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DA68_06395 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DA68_06405 PF00300 Histidine phosphatase superfamily (branch 1) DA68_06415 PF08757 CotH kinase protein DA68_06420 PF00293 NUDIX domain DA68_06425 PF09335 SNARE associated Golgi protein DA68_06430 PF14667 Polysaccharide biosynthesis C-terminal domain DA68_06430 PF01943 Polysaccharide biosynthesis protein DA68_06440 PF03773 Predicted permease DA68_06445 PF09323 Domain of unknown function (DUF1980) DA68_06450 PF03061 Thioesterase superfamily DA68_06455 PF13396 Phospholipase_D-nuclease N-terminal DA68_06455 PF13091 PLD-like domain DA68_06470 PF13460 NAD(P)H-binding DA68_06475 PF04306 Protein of unknown function (DUF456) DA68_06480 PF00571 CBS domain DA68_06480 PF03471 Transporter associated domain DA68_06480 PF01595 Cyclin M transmembrane N-terminal domain DA68_06495 PF05525 Branched-chain amino acid transport protein DA68_06500 PF01588 Putative tRNA binding domain DA68_06515 PF07454 Stage II sporulation protein P (SpoIIP) DA68_06525 PF02557 D-alanyl-D-alanine carboxypeptidase DA68_06535 PF01425 Amidase DA68_06540 PF07690 Major Facilitator Superfamily DA68_06550 PF01145 SPFH domain / Band 7 family DA68_06555 PF07454 Stage II sporulation protein P (SpoIIP) DA68_06560 PF00300 Histidine phosphatase superfamily (branch 1) DA68_06580 PF01168 Alanine racemase, N-terminal domain DA68_06580 PF00842 Alanine racemase, C-terminal domain DA68_06595 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase DA68_06600 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DA68_06600 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DA68_06605 PF00392 Bacterial regulatory proteins, gntR family DA68_06605 PF00155 Aminotransferase class I and II DA68_06635 PF00583 Acetyltransferase (GNAT) family DA68_06650 PF06013 Proteins of 100 residues with WXG DA68_06665 PF08817 WXG100 protein secretion system (Wss), protein YukD DA68_06670 PF10140 WXG100 protein secretion system (Wss), protein YukC DA68_06675 PF12538 DNA transporter DA68_06675 PF01580 FtsK/SpoIIIE family DA68_06735 PF00005 ABC transporter DA68_06825 PF00589 Phage integrase family DA68_06825 PF02899 Phage integrase, N-terminal SAM-like domain DA68_06835 PF09579 Sporulation protein YtfJ (Spore_YtfJ) DA68_06860 PF01209 ubiE/COQ5 methyltransferase family DA68_06865 PF01268 Formate--tetrahydrofolate ligase DA68_06875 PF00271 Helicase conserved C-terminal domain DA68_06875 PF00270 DEAD/DEAH box helicase DA68_06880 PF01261 Xylose isomerase-like TIM barrel DA68_06885 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DA68_06895 PF08240 Alcohol dehydrogenase GroES-like domain DA68_06895 PF00107 Zinc-binding dehydrogenase DA68_06900 PF08281 Sigma-70, region 4 DA68_06900 PF04542 Sigma-70 region 2 DA68_06925 PF00255 Glutathione peroxidase DA68_06930 PF13559 Domain of unknown function (DUF4129) DA68_06930 PF11992 Domain of unknown function (DUF3488) DA68_06930 PF01841 Transglutaminase-like superfamily DA68_06935 PF01882 Protein of unknown function DUF58 DA68_06940 PF07726 ATPase family associated with various cellular activities (AAA) DA68_06940 PF17863 AAA lid domain DA68_06955 PF00384 Molybdopterin oxidoreductase DA68_06955 PF14710 Respiratory nitrate reductase alpha N-terminal DA68_06955 PF01568 Molydopterin dinucleotide binding domain DA68_06960 PF13247 4Fe-4S dicluster domain DA68_06960 PF14711 Respiratory nitrate reductase beta C-terminal DA68_06965 PF02613 Nitrate reductase delta subunit DA68_06970 PF02665 Nitrate reductase gamma subunit DA68_06975 PF00027 Cyclic nucleotide-binding domain DA68_06975 PF00325 Bacterial regulatory proteins, crp family DA68_06980 PF06463 Molybdenum Cofactor Synthesis C DA68_06980 PF04055 Radical SAM superfamily DA68_06985 PF00899 ThiF family DA68_06990 PF00994 Probable molybdopterin binding domain DA68_06990 PF03454 MoeA C-terminal region (domain IV) DA68_06990 PF03453 MoeA N-terminal region (domain I and II) DA68_06995 PF02391 MoaE protein DA68_07000 PF02597 ThiS family DA68_07005 PF07690 Major Facilitator Superfamily DA68_07025 PF01903 CbiX DA68_07030 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DA68_07035 PF00355 Rieske [2Fe-2S] domain DA68_07040 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DA68_07040 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA68_07040 PF18267 Rubredoxin NAD+ reductase C-terminal domain DA68_07040 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DA68_07040 PF04324 BFD-like [2Fe-2S] binding domain DA68_07045 PF04405 Domain of Unknown function (DUF542) DA68_07045 PF01814 Hemerythrin HHE cation binding domain DA68_07080 PF04232 Stage V sporulation protein S (SpoVS) DA68_07095 PF18801 response regulator aspartate phosphatase H, N terminal DA68_07095 PF17874 MalT-like TPR region DA68_07110 PF01966 HD domain DA68_07115 PF00005 ABC transporter DA68_07115 PF12848 ABC transporter DA68_07115 PF16326 ABC transporter C-terminal domain DA68_07130 PF00436 Single-strand binding protein family DA68_07140 PF08712 Scaffold protein Nfu/NifU N terminal DA68_07140 PF13769 Virulence factor DA68_07150 PF06491 Disulphide isomerase DA68_07155 PF04445 Putative SAM-dependent methyltransferase DA68_07160 PF05746 DALR anticodon binding domain DA68_07160 PF00750 tRNA synthetases class I (R) DA68_07160 PF03485 Arginyl tRNA synthetase N terminal domain DA68_07180 PF08264 Anticodon-binding domain of tRNA DA68_07180 PF00133 tRNA synthetases class I (I, L, M and V) DA68_07195 PF01336 OB-fold nucleic acid binding domain DA68_07195 PF00152 tRNA synthetases class II (D, K and N) DA68_07200 PF00209 Sodium:neurotransmitter symporter family DA68_07215 PF10997 Alternate to MurJ DA68_07220 PF13419 Haloacid dehalogenase-like hydrolase DA68_07230 PF00465 Iron-containing alcohol dehydrogenase DA68_07235 PF01177 Asp/Glu/Hydantoin racemase DA68_07240 PF01980 tRNA-methyltransferase O DA68_07245 PF00583 Acetyltransferase (GNAT) family DA68_07250 PF11188 Protein of unknown function (DUF2975) DA68_07255 PF13443 Cro/C1-type HTH DNA-binding domain DA68_07260 PF08645 Polynucleotide kinase 3 phosphatase DA68_07270 PF14005 YpjP-like protein DA68_07275 PF13419 Haloacid dehalogenase-like hydrolase DA68_07290 PF00144 Beta-lactamase DA68_07290 PF07930 D-aminopeptidase, domain B DA68_07295 PF00303 Thymidylate synthase DA68_07300 PF00186 Dihydrofolate reductase DA68_07305 PF00905 Penicillin binding protein transpeptidase domain DA68_07305 PF05223 NTF2-like N-terminal transpeptidase domain DA68_07305 PF03717 Penicillin-binding Protein dimerisation domain DA68_07310 PF02525 Flavodoxin-like fold DA68_07315 PF01553 Acyltransferase DA68_07320 PF03006 Haemolysin-III related DA68_07325 PF02416 mttA/Hcf106 family DA68_07330 PF00902 Sec-independent protein translocase protein (TatC) DA68_07340 PF02645 Uncharacterised protein, DegV family COG1307 DA68_07350 PF02630 SCO1/SenC DA68_07355 PF00011 Hsp20/alpha crystallin family DA68_07360 PF13537 Glutamine amidotransferase domain DA68_07360 PF00733 Asparagine synthase DA68_07375 PF05036 Sporulation related domain DA68_07375 PF01520 N-acetylmuramoyl-L-alanine amidase DA68_07380 PF01497 Periplasmic binding protein DA68_07385 PF01063 Amino-transferase class IV DA68_07390 PF00881 Nitroreductase family DA68_07405 PF00857 Isochorismatase family DA68_07410 PF00011 Hsp20/alpha crystallin family DA68_07415 PF00924 Mechanosensitive ion channel DA68_07420 PF13185 GAF domain DA68_07420 PF07730 Histidine kinase DA68_07425 PF00072 Response regulator receiver domain DA68_07425 PF00196 Bacterial regulatory proteins, luxR family DA68_07430 PF01418 Helix-turn-helix domain, rpiR family DA68_07430 PF01380 SIS domain DA68_07435 PF02567 Phenazine biosynthesis-like protein DA68_07440 PF00107 Zinc-binding dehydrogenase DA68_07440 PF08240 Alcohol dehydrogenase GroES-like domain DA68_07455 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DA68_07455 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DA68_07460 PF02447 GntP family permease DA68_07465 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DA68_07465 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DA68_07470 PF10924 Protein of unknown function (DUF2711) DA68_07485 PF03358 NADPH-dependent FMN reductase DA68_07500 PF00005 ABC transporter DA68_07500 PF00571 CBS domain DA68_07505 PF00528 Binding-protein-dependent transport system inner membrane component DA68_07510 PF13520 Amino acid permease DA68_07540 PF03471 Transporter associated domain DA68_07540 PF01595 Cyclin M transmembrane N-terminal domain DA68_07540 PF00571 CBS domain DA68_07545 PF00171 Aldehyde dehydrogenase family DA68_07550 PF07997 Protein of unknown function (DUF1694) DA68_07555 PF09385 Histidine kinase N terminal DA68_07565 PF00202 Aminotransferase class-III DA68_07570 PF01144 Coenzyme A transferase DA68_07575 PF01144 Coenzyme A transferase DA68_07580 PF07687 Peptidase dimerisation domain DA68_07580 PF01546 Peptidase family M20/M25/M40 DA68_07585 PF00583 Acetyltransferase (GNAT) family DA68_07590 PF02954 Bacterial regulatory protein, Fis family DA68_07590 PF00158 Sigma-54 interaction domain DA68_07590 PF13426 PAS domain DA68_07595 PF12544 Lysine-2,3-aminomutase DA68_07600 PF14122 YokU-like protein, putative antitoxin DA68_07605 PF06855 YozE SAM-like fold DA68_07615 PF14162 YozD-like protein DA68_07625 PF00069 Protein kinase domain DA68_07625 PF08239 Bacterial SH3 domain DA68_07635 PF01569 PAP2 superfamily DA68_07640 PF16916 Dimerisation domain of Zinc Transporter DA68_07640 PF01545 Cation efflux family DA68_07645 PF00085 Thioredoxin DA68_07700 PF10676 Spore germination protein gerPA/gerPF DA68_07715 PF00106 short chain dehydrogenase DA68_07735 PF00905 Penicillin binding protein transpeptidase domain DA68_07735 PF00912 Transglycosylase DA68_07745 PF07690 Major Facilitator Superfamily DA68_07750 PF01521 Iron-sulphur cluster biosynthesis DA68_07755 PF00285 Citrate synthase, C-terminal domain DA68_07760 PF03972 MmgE/PrpD family DA68_07770 PF02770 Acyl-CoA dehydrogenase, middle domain DA68_07770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DA68_07770 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DA68_07775 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DA68_07775 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DA68_07780 PF00171 Aldehyde dehydrogenase family DA68_07785 PF01810 LysE type translocator DA68_07790 PF00378 Enoyl-CoA hydratase/isomerase DA68_07805 PF00149 Calcineurin-like phosphoesterase DA68_07805 PF12320 Type 5 capsule protein repressor C-terminal domain DA68_07810 PF13476 AAA domain DA68_07820 PF01022 Bacterial regulatory protein, arsR family DA68_07830 PF07690 Major Facilitator Superfamily DA68_07835 PF00106 short chain dehydrogenase DA68_07840 PF00425 chorismate binding enzyme DA68_07845 PF00501 AMP-binding enzyme DA68_07845 PF13193 AMP-binding enzyme C-terminal domain DA68_07850 PF00550 Phosphopantetheine attachment site DA68_07850 PF00857 Isochorismatase family DA68_07855 PF00975 Thioesterase domain DA68_07855 PF00550 Phosphopantetheine attachment site DA68_07855 PF00668 Condensation domain DA68_07855 PF13193 AMP-binding enzyme C-terminal domain DA68_07855 PF00501 AMP-binding enzyme DA68_07860 PF03621 MbtH-like protein DA68_07865 PF07690 Major Facilitator Superfamily DA68_07880 PF00216 Bacterial DNA-binding protein DA68_07890 PF05163 DinB family DA68_07895 PF00082 Subtilase family DA68_07900 PF01235 Sodium:alanine symporter family DA68_07920 PF01479 S4 domain DA68_07920 PF00849 RNA pseudouridylate synthase DA68_07925 PF03129 Anticodon binding domain DA68_07925 PF02824 TGS domain DA68_07925 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DA68_07925 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DA68_07930 PF00005 ABC transporter DA68_07945 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DA68_07945 PF00205 Thiamine pyrophosphate enzyme, central domain DA68_07945 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DA68_07955 PF00753 Metallo-beta-lactamase superfamily DA68_07980 PF00027 Cyclic nucleotide-binding domain DA68_07990 PF00561 alpha/beta hydrolase fold DA68_08000 PF16123 Hydroxyacylglutathione hydrolase C-terminus DA68_08000 PF00753 Metallo-beta-lactamase superfamily DA68_08010 PF03176 MMPL family DA68_08020 PF00302 Chloramphenicol acetyltransferase DA68_08035 PF00583 Acetyltransferase (GNAT) family DA68_08070 PF13302 Acetyltransferase (GNAT) domain DA68_08080 PF00313 'Cold-shock' DNA-binding domain DA68_08105 PF01118 Semialdehyde dehydrogenase, NAD binding domain DA68_08105 PF02774 Semialdehyde dehydrogenase, dimerisation domain DA68_08120 PF03466 LysR substrate binding domain DA68_08120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA68_08125 PF03473 MOSC domain DA68_08125 PF03475 3-alpha domain DA68_08140 PF00664 ABC transporter transmembrane region DA68_08140 PF00005 ABC transporter DA68_08145 PF00005 ABC transporter DA68_08145 PF00664 ABC transporter transmembrane region DA68_08195 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA68_08195 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DA68_08200 PF12680 SnoaL-like domain DA68_08200 PF08281 Sigma-70, region 4 DA68_08200 PF04542 Sigma-70 region 2 DA68_08225 PF02638 Glycosyl hydrolase-like 10 DA68_08235 PF02378 Phosphotransferase system, EIIC DA68_08250 PF01869 BadF/BadG/BcrA/BcrD ATPase family DA68_08255 PF02660 Glycerol-3-phosphate acyltransferase DA68_08260 PF00266 Aminotransferase class-V DA68_08265 PF00291 Pyridoxal-phosphate dependent enzyme DA68_08270 PF01047 MarR family DA68_08275 PF07690 Major Facilitator Superfamily DA68_08285 PF00753 Metallo-beta-lactamase superfamily DA68_08285 PF16123 Hydroxyacylglutathione hydrolase C-terminus DA68_08290 PF00270 DEAD/DEAH box helicase DA68_08290 PF00271 Helicase conserved C-terminal domain DA68_08300 PF00440 Bacterial regulatory proteins, tetR family DA68_08300 PF17932 Tetracyclin repressor-like, C-terminal domain DA68_08325 PF00589 Phage integrase family DA68_08330 PF01609 Transposase DDE domain DA68_08340 PF04239 Protein of unknown function (DUF421) DA68_08375 PF03848 Tellurite resistance protein TehB DA68_08375 PF09313 Domain of unknown function (DUF1971) DA68_08385 PF08241 Methyltransferase domain DA68_08390 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DA68_08390 PF00205 Thiamine pyrophosphate enzyme, central domain DA68_08390 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DA68_08395 PF01047 MarR family DA68_08400 PF00300 Histidine phosphatase superfamily (branch 1) DA68_08405 PF14171 Toxin SpoIISA, type II toxin-antitoxin system DA68_08425 PF07687 Peptidase dimerisation domain DA68_08425 PF01546 Peptidase family M20/M25/M40 DA68_08440 PF00196 Bacterial regulatory proteins, luxR family DA68_08440 PF00072 Response regulator receiver domain DA68_08450 PF18277 AbrB C-terminal domain DA68_08450 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DA68_08460 PF01925 Sulfite exporter TauE/SafE DA68_08465 PF00132 Bacterial transferase hexapeptide (six repeats) DA68_08470 PF00768 D-alanyl-D-alanine carboxypeptidase DA68_08470 PF07943 Penicillin-binding protein 5, C-terminal domain DA68_08480 PF07690 Major Facilitator Superfamily DA68_08485 PF00550 Phosphopantetheine attachment site DA68_08485 PF00668 Condensation domain DA68_08485 PF13193 AMP-binding enzyme C-terminal domain DA68_08485 PF00501 AMP-binding enzyme DA68_08490 PF13193 AMP-binding enzyme C-terminal domain DA68_08490 PF00668 Condensation domain DA68_08490 PF00501 AMP-binding enzyme DA68_08490 PF00550 Phosphopantetheine attachment site DA68_08490 PF07993 Male sterility protein DA68_08495 PF13193 AMP-binding enzyme C-terminal domain DA68_08495 PF00501 AMP-binding enzyme DA68_08495 PF00550 Phosphopantetheine attachment site DA68_08495 PF00668 Condensation domain DA68_08500 PF01648 4'-phosphopantetheinyl transferase superfamily DA68_08505 PF00975 Thioesterase domain DA68_08555 PF13302 Acetyltransferase (GNAT) domain DA68_08565 PF01520 N-acetylmuramoyl-L-alanine amidase DA68_08565 PF00395 S-layer homology domain DA68_08580 PF01734 Patatin-like phospholipase DA68_08580 PF00027 Cyclic nucleotide-binding domain DA68_08595 PF03315 Serine dehydratase beta chain DA68_08595 PF01842 ACT domain DA68_08600 PF03313 Serine dehydratase alpha chain DA68_08635 PF00282 Pyridoxal-dependent decarboxylase conserved domain DA68_08650 PF05504 Spore germination B3/ GerAC like, C-terminal DA68_08655 PF00355 Rieske [2Fe-2S] domain DA68_08660 PF01098 Cell cycle protein DA68_08665 PF00571 CBS domain DA68_08665 PF01769 Divalent cation transporter DA68_08665 PF03448 MgtE intracellular N domain DA68_08675 PF03717 Penicillin-binding Protein dimerisation domain DA68_08675 PF00905 Penicillin binding protein transpeptidase domain DA68_08675 PF05223 NTF2-like N-terminal transpeptidase domain DA68_08680 PF04542 Sigma-70 region 2 DA68_08680 PF08281 Sigma-70, region 4 DA68_08690 PF03717 Penicillin-binding Protein dimerisation domain DA68_08690 PF00905 Penicillin binding protein transpeptidase domain DA68_08705 PF00149 Calcineurin-like phosphoesterase DA68_08715 PF00005 ABC transporter DA68_08725 PF08359 YsiA-like protein, C-terminal region DA68_08725 PF00440 Bacterial regulatory proteins, tetR family DA68_08740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DA68_08740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DA68_08740 PF02770 Acyl-CoA dehydrogenase, middle domain DA68_08745 PF00289 Biotin carboxylase, N-terminal domain DA68_08745 PF02785 Biotin carboxylase C-terminal domain DA68_08745 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DA68_08750 PF00364 Biotin-requiring enzyme DA68_08755 PF00682 HMGL-like DA68_08760 PF00378 Enoyl-CoA hydratase/isomerase DA68_08765 PF01039 Carboxyl transferase domain DA68_08770 PF16177 Acetyl-coenzyme A synthetase N-terminus DA68_08770 PF13193 AMP-binding enzyme C-terminal domain DA68_08770 PF00501 AMP-binding enzyme DA68_08790 PF00485 Phosphoribulokinase / Uridine kinase family DA68_08800 PF07943 Penicillin-binding protein 5, C-terminal domain DA68_08800 PF00768 D-alanyl-D-alanine carboxypeptidase DA68_08805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_08805 PF00512 His Kinase A (phospho-acceptor) domain DA68_08810 PF00486 Transcriptional regulatory protein, C terminal DA68_08810 PF00072 Response regulator receiver domain DA68_08815 PF01966 HD domain DA68_08825 PF01048 Phosphorylase superfamily DA68_08840 PF03413 Peptidase propeptide and YPEB domain DA68_08840 PF01447 Thermolysin metallopeptidase, catalytic domain DA68_08840 PF07504 Fungalysin/Thermolysin Propeptide Motif DA68_08840 PF02868 Thermolysin metallopeptidase, alpha-helical domain DA68_08845 PF17853 GGDEF-like domain DA68_08845 PF12833 Helix-turn-helix domain DA68_08875 PF17760 UvrA interaction domain DA68_08875 PF00005 ABC transporter DA68_08875 PF17755 UvrA DNA-binding domain DA68_08880 PF00376 MerR family regulatory protein DA68_08880 PF09278 MerR, DNA binding DA68_08885 PF07690 Major Facilitator Superfamily DA68_08915 PF01636 Phosphotransferase enzyme family DA68_08920 PF12833 Helix-turn-helix domain DA68_08935 PF00155 Aminotransferase class I and II DA68_08935 PF00392 Bacterial regulatory proteins, gntR family DA68_08940 PF02796 Helix-turn-helix domain of resolvase DA68_08940 PF00239 Resolvase, N terminal domain DA68_08950 PF01965 DJ-1/PfpI family DA68_08965 PF04239 Protein of unknown function (DUF421) DA68_08980 PF08450 SMP-30/Gluconolactonase/LRE-like region DA68_08985 PF01921 tRNA synthetases class I (K) DA68_08990 PF07486 Cell Wall Hydrolase DA68_09000 PF00486 Transcriptional regulatory protein, C terminal DA68_09000 PF00072 Response regulator receiver domain DA68_09005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_09020 PF00005 ABC transporter DA68_09025 PF02687 FtsX-like permease family DA68_09045 PF01842 ACT domain DA68_09045 PF00742 Homoserine dehydrogenase DA68_09045 PF03447 Homoserine dehydrogenase, NAD binding domain DA68_09050 PF00155 Aminotransferase class I and II DA68_09050 PF00392 Bacterial regulatory proteins, gntR family DA68_09055 PF01820 D-ala D-ala ligase N-terminus DA68_09055 PF07478 D-ala D-ala ligase C-terminus DA68_09060 PF03070 TENA/THI-4/PQQC family DA68_09120 PF00067 Cytochrome P450 DA68_09130 PF00132 Bacterial transferase hexapeptide (six repeats) DA68_09135 PF07561 Domain of Unknown Function (DUF1540) DA68_09145 PF00067 Cytochrome P450 DA68_09160 PF13426 PAS domain DA68_09160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_09160 PF00512 His Kinase A (phospho-acceptor) domain DA68_09160 PF00989 PAS fold DA68_09160 PF13188 PAS domain DA68_09175 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase DA68_09180 PF01177 Asp/Glu/Hydantoin racemase DA68_09185 PF07155 ECF-type riboflavin transporter, S component DA68_09190 PF00005 ABC transporter DA68_09190 PF12558 ATP-binding cassette cobalt transporter DA68_09200 PF00512 His Kinase A (phospho-acceptor) domain DA68_09200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_09240 PF08240 Alcohol dehydrogenase GroES-like domain DA68_09240 PF00107 Zinc-binding dehydrogenase DA68_09245 PF01569 PAP2 superfamily DA68_09295 PF07690 Major Facilitator Superfamily DA68_09300 PF07690 Major Facilitator Superfamily DA68_09315 PF03009 Glycerophosphoryl diester phosphodiesterase family DA68_09335 PF00155 Aminotransferase class I and II DA68_09335 PF00392 Bacterial regulatory proteins, gntR family DA68_09340 PF00892 EamA-like transporter family DA68_09345 PF01270 Glycosyl hydrolases family 8 DA68_09350 PF01156 Inosine-uridine preferring nucleoside hydrolase DA68_09360 PF01784 NIF3 (NGG1p interacting factor 3) DA68_09365 PF00293 NUDIX domain DA68_09385 PF07690 Major Facilitator Superfamily DA68_09400 PF09297 NADH pyrophosphatase zinc ribbon domain DA68_09400 PF00293 NUDIX domain DA68_09405 PF00712 DNA polymerase III beta subunit, N-terminal domain DA68_09405 PF02767 DNA polymerase III beta subunit, central domain DA68_09405 PF02768 DNA polymerase III beta subunit, C-terminal domain DA68_09415 PF12706 Beta-lactamase superfamily domain DA68_09425 PF09234 Domain of unknown function (DUF1963) DA68_09450 PF01734 Patatin-like phospholipase DA68_09455 PF08000 Bacterial PH domain DA68_09465 PF12867 DinB superfamily DA68_09480 PF02673 Bacitracin resistance protein BacA DA68_09490 PF01541 GIY-YIG catalytic domain DA68_09530 PF01266 FAD dependent oxidoreductase DA68_09560 PF00486 Transcriptional regulatory protein, C terminal DA68_09560 PF00072 Response regulator receiver domain DA68_09565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_09565 PF00989 PAS fold DA68_09565 PF16736 Single Cache-like DA68_09565 PF00512 His Kinase A (phospho-acceptor) domain DA68_09580 PF00005 ABC transporter DA68_09585 PF12704 MacB-like periplasmic core domain DA68_09585 PF02687 FtsX-like permease family DA68_09595 PF07859 alpha/beta hydrolase fold DA68_09600 PF00282 Pyridoxal-dependent decarboxylase conserved domain DA68_09605 PF13193 AMP-binding enzyme C-terminal domain DA68_09605 PF00550 Phosphopantetheine attachment site DA68_09605 PF00668 Condensation domain DA68_09605 PF00501 AMP-binding enzyme DA68_09615 PF00128 Alpha amylase, catalytic domain DA68_09615 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DA68_09615 PF03714 Bacterial pullanase-associated domain DA68_09620 PF03413 Peptidase propeptide and YPEB domain DA68_09620 PF02868 Thermolysin metallopeptidase, alpha-helical domain DA68_09620 PF01447 Thermolysin metallopeptidase, catalytic domain DA68_09620 PF07504 Fungalysin/Thermolysin Propeptide Motif DA68_09625 PF00149 Calcineurin-like phosphoesterase DA68_09625 PF02872 5'-nucleotidase, C-terminal domain DA68_09645 PF00344 SecY translocase DA68_09650 PF00892 EamA-like transporter family DA68_09655 PF00155 Aminotransferase class I and II DA68_09655 PF00392 Bacterial regulatory proteins, gntR family DA68_09660 PF00561 alpha/beta hydrolase fold DA68_09685 PF06081 Aromatic acid exporter family member 1 DA68_09685 PF06081 Aromatic acid exporter family member 1 DA68_09700 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) DA68_09705 PF03413 Peptidase propeptide and YPEB domain DA68_09705 PF14620 YpeB sporulation DA68_09710 PF07486 Cell Wall Hydrolase DA68_09710 PF01471 Putative peptidoglycan binding domain DA68_09730 PF03301 Tryptophan 2,3-dioxygenase DA68_09735 PF04199 Putative cyclase DA68_09740 PF00266 Aminotransferase class-V DA68_09745 PF00440 Bacterial regulatory proteins, tetR family DA68_09745 PF08359 YsiA-like protein, C-terminal region DA68_09750 PF13344 Haloacid dehalogenase-like hydrolase DA68_09750 PF00293 NUDIX domain DA68_09775 PF01590 GAF domain DA68_09775 PF02954 Bacterial regulatory protein, Fis family DA68_09775 PF00158 Sigma-54 interaction domain DA68_09785 PF13302 Acetyltransferase (GNAT) domain DA68_09790 PF00455 DeoR C terminal sensor domain DA68_09790 PF08220 DeoR-like helix-turn-helix domain DA68_09805 PF02082 Transcriptional regulator DA68_09820 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA68_09820 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DA68_09825 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DA68_09825 PF00364 Biotin-requiring enzyme DA68_09825 PF02817 e3 binding domain DA68_09830 PF02779 Transketolase, pyrimidine binding domain DA68_09830 PF02780 Transketolase, C-terminal domain DA68_09835 PF00676 Dehydrogenase E1 component DA68_09845 PF00106 short chain dehydrogenase DA68_09850 PF04229 GrpB protein DA68_09850 PF13673 Acetyltransferase (GNAT) domain DA68_09880 PF00528 Binding-protein-dependent transport system inner membrane component DA68_09885 PF00005 ABC transporter DA68_09885 PF00571 CBS domain DA68_09890 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DA68_09895 PF00574 Clp protease DA68_09910 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DA68_09915 PF13673 Acetyltransferase (GNAT) domain DA68_09920 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading DA68_09920 PF18416 N-acetylglucosamine binding protein domain 2 DA68_09925 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase DA68_09930 PF03781 Sulfatase-modifying factor enzyme 1 DA68_09935 PF01202 Shikimate kinase DA68_09945 PF10990 Protein of unknown function (DUF2809) DA68_09950 PF08241 Methyltransferase domain DA68_09955 PF04237 YjbR DA68_10000 PF13538 UvrD-like helicase C-terminal domain DA68_10015 PF00270 DEAD/DEAH box helicase DA68_10015 PF00570 HRDC domain DA68_10015 PF16124 RecQ zinc-binding DA68_10015 PF09382 RQC domain DA68_10015 PF00271 Helicase conserved C-terminal domain DA68_10050 PF02833 DHHA2 domain DA68_10050 PF01368 DHH family DA68_10055 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading DA68_10055 PF18416 N-acetylglucosamine binding protein domain 2 DA68_10070 PF03193 RsgA GTPase DA68_10075 PF02627 Carboxymuconolactone decarboxylase family DA68_10080 PF01235 Sodium:alanine symporter family DA68_10085 PF00171 Aldehyde dehydrogenase family DA68_10090 PF00701 Dihydrodipicolinate synthetase family DA68_10095 PF05544 Proline racemase DA68_10100 PF05544 Proline racemase DA68_10105 PF01266 FAD dependent oxidoreductase DA68_10110 PF13426 PAS domain DA68_10110 PF00158 Sigma-54 interaction domain DA68_10110 PF02954 Bacterial regulatory protein, Fis family DA68_10115 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA68_10115 PF04324 BFD-like [2Fe-2S] binding domain DA68_10125 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA68_10125 PF04324 BFD-like [2Fe-2S] binding domain DA68_10140 PF08876 Domain of unknown function (DUF1836) DA68_10150 PF01966 HD domain DA68_10155 PF09335 SNARE associated Golgi protein DA68_10165 PF04914 DltD protein DA68_10175 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DA68_10180 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain DA68_10180 PF00877 NlpC/P60 family DA68_10185 PF13378 Enolase C-terminal domain-like DA68_10185 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DA68_10200 PF00248 Aldo/keto reductase family DA68_10205 PF01965 DJ-1/PfpI family DA68_10235 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DA68_10235 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DA68_10245 PF00672 HAMP domain DA68_10245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_10245 PF00512 His Kinase A (phospho-acceptor) domain DA68_10250 PF00072 Response regulator receiver domain DA68_10250 PF00486 Transcriptional regulatory protein, C terminal DA68_10275 PF13419 Haloacid dehalogenase-like hydrolase DA68_10280 PF01048 Phosphorylase superfamily DA68_10285 PF03808 Glycosyl transferase WecB/TagA/CpsF family DA68_10290 PF01432 Peptidase family M3 DA68_10290 PF08439 Oligopeptidase F DA68_10295 PF02645 Uncharacterised protein, DegV family COG1307 DA68_10300 PF07552 Spore Coat Protein X and V domain DA68_10335 PF07690 Major Facilitator Superfamily DA68_10345 PF04519 Polymer-forming cytoskeletal DA68_10350 PF13171 Protein of unknown function (DUF4004) DA68_10355 PF12793 Sugar transport-related sRNA regulator N-term DA68_10355 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DA68_10360 PF07690 Major Facilitator Superfamily DA68_10380 PF04226 Transglycosylase associated protein DA68_10430 PF00155 Aminotransferase class I and II DA68_10435 PF07977 FabA-like domain DA68_10440 PF03630 Fumble DA68_10460 PF00005 ABC transporter DA68_10505 PF01594 AI-2E family transporter DA68_10515 PF00296 Luciferase-like monooxygenase DA68_10520 PF00528 Binding-protein-dependent transport system inner membrane component DA68_10525 PF09084 NMT1/THI5 like DA68_10530 PF00005 ABC transporter DA68_10555 PF02522 Aminoglycoside 3-N-acetyltransferase DA68_10575 PF13536 Putative multidrug resistance efflux transporter DA68_10595 PF08713 DNA alkylation repair enzyme DA68_10600 PF00291 Pyridoxal-phosphate dependent enzyme DA68_10605 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DA68_10610 PF01522 Polysaccharide deacetylase DA68_10615 PF03741 Integral membrane protein TerC family DA68_10620 PF00884 Sulfatase DA68_10625 PF00005 ABC transporter DA68_10625 PF12848 ABC transporter DA68_10630 PF03176 MMPL family DA68_10635 PF00440 Bacterial regulatory proteins, tetR family DA68_10635 PF16295 Tetracyclin repressor-like, C-terminal domain DA68_10645 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DA68_10650 PF01842 ACT domain DA68_10650 PF02153 Prephenate dehydrogenase DA68_10655 PF00155 Aminotransferase class I and II DA68_10660 PF01264 Chorismate synthase DA68_10665 PF01817 Chorismate mutase type II DA68_10665 PF00793 DAHP synthetase I family DA68_10685 PF01636 Phosphotransferase enzyme family DA68_10705 PF06725 3D domain DA68_10705 PF01476 LysM domain DA68_10715 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DA68_10720 PF08031 Berberine and berberine like DA68_10720 PF01565 FAD binding domain DA68_10740 PF06039 Malate:quinone oxidoreductase (Mqo) DA68_10745 PF13407 Periplasmic binding protein domain DA68_10750 PF02653 Branched-chain amino acid transport system / permease component DA68_10755 PF02653 Branched-chain amino acid transport system / permease component DA68_10760 PF00005 ABC transporter DA68_10765 PF04198 Putative sugar-binding domain DA68_10765 PF00325 Bacterial regulatory proteins, crp family DA68_10770 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DA68_10770 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DA68_10780 PF01791 DeoC/LacD family aldolase DA68_10785 PF03992 Antibiotic biosynthesis monooxygenase DA68_10805 PF01773 Na+ dependent nucleoside transporter N-terminus DA68_10805 PF07662 Na+ dependent nucleoside transporter C-terminus DA68_10810 PF00171 Aldehyde dehydrogenase family DA68_10815 PF00696 Amino acid kinase family DA68_10815 PF01472 PUA domain DA68_10820 PF14748 Pyrroline-5-carboxylate reductase dimerisation DA68_10820 PF03807 NADP oxidoreductase coenzyme F420-dependent DA68_10825 PF01546 Peptidase family M20/M25/M40 DA68_10830 PF09339 IclR helix-turn-helix domain DA68_10830 PF01614 Bacterial transcriptional regulator DA68_10835 PF00324 Amino acid permease DA68_10845 PF00487 Fatty acid desaturase DA68_10850 PF05547 Immune inhibitor A peptidase M6 DA68_10855 PF04294 VanW like protein DA68_10860 PF00245 Alkaline phosphatase DA68_10865 PF11188 Protein of unknown function (DUF2975) DA68_10870 PF13443 Cro/C1-type HTH DNA-binding domain DA68_10895 PF13302 Acetyltransferase (GNAT) domain DA68_10900 PF12681 Glyoxalase-like domain DA68_10920 PF07726 ATPase family associated with various cellular activities (AAA) DA68_10920 PF17863 AAA lid domain DA68_10935 PF07690 Major Facilitator Superfamily DA68_10945 PF00535 Glycosyl transferase family 2 DA68_10955 PF00535 Glycosyl transferase family 2 DA68_10965 PF00535 Glycosyl transferase family 2 DA68_10975 PF00202 Aminotransferase class-III DA68_10980 PF00199 Catalase DA68_10980 PF06628 Catalase-related immune-responsive DA68_10985 PF08453 Peptidase family M9 N-terminal DA68_10985 PF18496 Collagenase G catalytic helper subdomain DA68_10985 PF04151 Bacterial pre-peptidase C-terminal domain DA68_10985 PF01752 Collagenase DA68_10995 PF01979 Amidohydrolase family DA68_10995 PF13382 Adenine deaminase C-terminal domain DA68_11000 PF00144 Beta-lactamase DA68_11020 PF17863 AAA lid domain DA68_11020 PF07726 ATPase family associated with various cellular activities (AAA) DA68_11055 PF04740 LXG domain of WXG superfamily DA68_11055 PF14436 Bacterial EndoU nuclease DA68_11075 PF00881 Nitroreductase family DA68_11080 PF01047 MarR family DA68_11085 PF00009 Elongation factor Tu GTP binding domain DA68_11085 PF03764 Elongation factor G, domain IV DA68_11085 PF00679 Elongation factor G C-terminus DA68_11085 PF14492 Elongation Factor G, domain II DA68_11095 PF00293 NUDIX domain DA68_11100 PF05406 WGR domain DA68_11110 PF16363 GDP-mannose 4,6 dehydratase DA68_11115 PF00005 ABC transporter DA68_11140 PF12833 Helix-turn-helix domain DA68_11145 PF11734 TilS substrate C-terminal domain DA68_11145 PF14437 MafB19-like deaminase DA68_11145 PF01171 PP-loop family DA68_11150 PF00583 Acetyltransferase (GNAT) family DA68_11160 PF00293 NUDIX domain DA68_11160 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain DA68_11160 PF09297 NADH pyrophosphatase zinc ribbon domain DA68_11165 PF00892 EamA-like transporter family DA68_11170 PF00155 Aminotransferase class I and II DA68_11170 PF00392 Bacterial regulatory proteins, gntR family DA68_11175 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DA68_11180 PF13031 Protein of unknown function (DUF3892) DA68_11215 PF01925 Sulfite exporter TauE/SafE DA68_11225 PF00324 Amino acid permease DA68_11235 PF08713 DNA alkylation repair enzyme DA68_11255 PF00293 NUDIX domain DA68_11260 PF04989 Cephalosporin hydroxylase DA68_11265 PF10502 Signal peptidase, peptidase S26 DA68_11280 PF02146 Sir2 family DA68_11285 PF01470 Pyroglutamyl peptidase DA68_11300 PF03746 LamB/YcsF family DA68_11305 PF02626 Carboxyltransferase domain, subdomain A and B DA68_11310 PF02682 Carboxyltransferase domain, subdomain C and D DA68_11315 PF09339 IclR helix-turn-helix domain DA68_11315 PF01614 Bacterial transcriptional regulator DA68_11320 PF10502 Signal peptidase, peptidase S26 DA68_11325 PF03932 CutC family DA68_11340 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DA68_11340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DA68_11340 PF02770 Acyl-CoA dehydrogenase, middle domain DA68_11370 PF10903 Protein of unknown function (DUF2691) DA68_11375 PF02915 Rubrerythrin DA68_11395 PF00440 Bacterial regulatory proteins, tetR family DA68_11400 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DA68_11400 PF00391 PEP-utilising enzyme, mobile domain DA68_11410 PF00753 Metallo-beta-lactamase superfamily DA68_11415 PF10710 Protein of unknown function (DUF2512) DA68_11420 PF11553 Protein of unknown function (DUF3231) DA68_11425 PF00269 Small, acid-soluble spore proteins, alpha/beta type DA68_11430 PF08240 Alcohol dehydrogenase GroES-like domain DA68_11430 PF13823 Alcohol dehydrogenase GroES-associated DA68_11430 PF00107 Zinc-binding dehydrogenase DA68_11440 PF00206 Lyase DA68_11440 PF10415 Fumarase C C-terminus DA68_11445 PF17763 Glutaminase/Asparaginase C-terminal domain DA68_11445 PF00710 Asparaginase, N-terminal DA68_11450 PF01381 Helix-turn-helix DA68_11455 PF05504 Spore germination B3/ GerAC like, C-terminal DA68_11460 PF03845 Spore germination protein DA68_11465 PF03323 Bacillus/Clostridium GerA spore germination protein DA68_11470 PF00512 His Kinase A (phospho-acceptor) domain DA68_11470 PF13426 PAS domain DA68_11470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_11470 PF13188 PAS domain DA68_11470 PF00989 PAS fold DA68_11475 PF05791 Bacillus haemolytic enterotoxin (HBL) DA68_11480 PF05791 Bacillus haemolytic enterotoxin (HBL) DA68_11495 PF12833 Helix-turn-helix domain DA68_11495 PF17853 GGDEF-like domain DA68_11505 PF00269 Small, acid-soluble spore proteins, alpha/beta type DA68_11515 PF13520 Amino acid permease DA68_11520 PF03807 NADP oxidoreductase coenzyme F420-dependent DA68_11520 PF14748 Pyrroline-5-carboxylate reductase dimerisation DA68_11525 PF05504 Spore germination B3/ GerAC like, C-terminal DA68_11530 PF03845 Spore germination protein DA68_11535 PF03323 Bacillus/Clostridium GerA spore germination protein DA68_11540 PF00072 Response regulator receiver domain DA68_11540 PF08664 YcbB domain DA68_11545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_11550 PF04960 Glutaminase DA68_11555 PF01235 Sodium:alanine symporter family DA68_11565 PF00144 Beta-lactamase DA68_11575 PF02872 5'-nucleotidase, C-terminal domain DA68_11575 PF17936 Bacterial Ig domain DA68_11575 PF00149 Calcineurin-like phosphoesterase DA68_11580 PF00561 alpha/beta hydrolase fold DA68_11585 PF00857 Isochorismatase family DA68_11600 PF01979 Amidohydrolase family DA68_11605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA68_11605 PF03466 LysR substrate binding domain DA68_11610 PF01047 MarR family DA68_11615 PF07690 Major Facilitator Superfamily DA68_11620 PF18496 Collagenase G catalytic helper subdomain DA68_11620 PF01752 Collagenase DA68_11620 PF08453 Peptidase family M9 N-terminal DA68_11640 PF01544 CorA-like Mg2+ transporter protein DA68_11655 PF11181 Heat induced stress protein YflT DA68_11660 PF12146 Serine aminopeptidase, S33 DA68_11660 PF13026 Protein of unknown function (DUF3887) DA68_11675 PF03073 TspO/MBR family DA68_11680 PF03441 FAD binding domain of DNA photolyase DA68_11680 PF00875 DNA photolyase DA68_11700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_11700 PF00512 His Kinase A (phospho-acceptor) domain DA68_11705 PF00072 Response regulator receiver domain DA68_11705 PF00486 Transcriptional regulatory protein, C terminal DA68_11715 PF07690 Major Facilitator Superfamily DA68_11725 PF07859 alpha/beta hydrolase fold DA68_11735 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) DA68_11740 PF00361 Proton-conducting membrane transporter DA68_11740 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DA68_11745 PF10057 Uncharacterized conserved protein (DUF2294) DA68_11750 PF07690 Major Facilitator Superfamily DA68_11770 PF01522 Polysaccharide deacetylase DA68_11780 PF01040 UbiA prenyltransferase family DA68_11785 PF12833 Helix-turn-helix domain DA68_11785 PF01965 DJ-1/PfpI family DA68_11800 PF01451 Low molecular weight phosphotyrosine protein phosphatase DA68_11805 PF01758 Sodium Bile acid symporter family DA68_11810 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DA68_11815 PF01022 Bacterial regulatory protein, arsR family DA68_11830 PF07993 Male sterility protein DA68_11830 PF00550 Phosphopantetheine attachment site DA68_11835 PF18665 Tetracyclin repressor-like, C-terminal domain DA68_11835 PF00440 Bacterial regulatory proteins, tetR family DA68_11850 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DA68_11860 PF00144 Beta-lactamase DA68_11865 PF08803 Putative mono-oxygenase ydhR DA68_11875 PF12802 MarR family DA68_11915 PF00196 Bacterial regulatory proteins, luxR family DA68_11915 PF00072 Response regulator receiver domain DA68_11925 PF00005 ABC transporter DA68_11930 PF00512 His Kinase A (phospho-acceptor) domain DA68_11930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_11935 PF00072 Response regulator receiver domain DA68_11935 PF00486 Transcriptional regulatory protein, C terminal DA68_11955 PF00175 Oxidoreductase NAD-binding domain DA68_11955 PF00667 FAD binding domain DA68_11955 PF00067 Cytochrome P450 DA68_11955 PF00258 Flavodoxin DA68_11960 PF07690 Major Facilitator Superfamily DA68_11975 PF00291 Pyridoxal-phosphate dependent enzyme DA68_11990 PF04072 Leucine carboxyl methyltransferase DA68_12005 PF00005 ABC transporter DA68_12010 PF02687 FtsX-like permease family DA68_12025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_12025 PF00672 HAMP domain DA68_12025 PF00512 His Kinase A (phospho-acceptor) domain DA68_12030 PF00072 Response regulator receiver domain DA68_12030 PF00486 Transcriptional regulatory protein, C terminal DA68_12035 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DA68_12035 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DA68_12060 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DA68_12060 PF01842 ACT domain DA68_12060 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DA68_12065 PF00266 Aminotransferase class-V DA68_12100 PF01471 Putative peptidoglycan binding domain DA68_12100 PF01510 N-acetylmuramoyl-L-alanine amidase DA68_12100 PF01476 LysM domain DA68_12140 PF04740 LXG domain of WXG superfamily DA68_12215 PF02557 D-alanyl-D-alanine carboxypeptidase DA68_12220 PF09587 Bacterial capsule synthesis protein PGA_cap DA68_12225 PF14044 NETI protein DA68_12230 PF07690 Major Facilitator Superfamily DA68_12240 PF12697 Alpha/beta hydrolase family DA68_12245 PF01047 MarR family DA68_12250 PF07690 Major Facilitator Superfamily DA68_12260 PF02667 Short chain fatty acid transporter DA68_12270 PF02525 Flavodoxin-like fold DA68_12290 PF14256 YwiC-like protein DA68_12300 PF00005 ABC transporter DA68_12305 PF02361 Cobalt transport protein DA68_12320 PF03737 Aldolase/RraA DA68_12325 PF03606 C4-dicarboxylate anaerobic carrier DA68_12330 PF04231 Endonuclease I DA68_12340 PF00561 alpha/beta hydrolase fold DA68_12350 PF04073 Aminoacyl-tRNA editing domain DA68_12355 PF13393 Histidyl-tRNA synthetase DA68_12355 PF03129 Anticodon binding domain DA68_12370 PF01638 HxlR-like helix-turn-helix DA68_12375 PF00881 Nitroreductase family DA68_12385 PF00224 Pyruvate kinase, barrel domain DA68_12385 PF02887 Pyruvate kinase, alpha/beta domain DA68_12385 PF00391 PEP-utilising enzyme, mobile domain DA68_12415 PF00005 ABC transporter DA68_12440 PF13419 Haloacid dehalogenase-like hydrolase DA68_12465 PF00293 NUDIX domain DA68_12465 PF13344 Haloacid dehalogenase-like hydrolase DA68_12470 PF00579 tRNA synthetases class I (W and Y) DA68_12475 PF13288 DXP reductoisomerase C-terminal domain DA68_12475 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DA68_12475 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DA68_12480 PF01594 AI-2E family transporter DA68_12525 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DA68_12535 PF01595 Cyclin M transmembrane N-terminal domain DA68_12535 PF03471 Transporter associated domain DA68_12535 PF00571 CBS domain DA68_12540 PF13411 MerR HTH family regulatory protein DA68_12550 PF00483 Nucleotidyl transferase DA68_12555 PF16363 GDP-mannose 4,6 dehydratase DA68_12560 PF08421 Putative zinc binding domain DA68_12560 PF08484 C-methyltransferase C-terminal domain DA68_12565 PF01370 NAD dependent epimerase/dehydratase family DA68_12580 PF00892 EamA-like transporter family DA68_12585 PF00805 Pentapeptide repeats (8 copies) DA68_12590 PF06906 Protein of unknown function (DUF1272) DA68_12595 PF10282 Lactonase, 7-bladed beta-propeller DA68_12600 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DA68_12600 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DA68_12605 PF02447 GntP family permease DA68_12610 PF00923 Transaldolase/Fructose-6-phosphate aldolase DA68_12615 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DA68_12615 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DA68_12620 PF02779 Transketolase, pyrimidine binding domain DA68_12620 PF02780 Transketolase, C-terminal domain DA68_12620 PF00456 Transketolase, thiamine diphosphate binding domain DA68_12625 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DA68_12625 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DA68_12630 PF14765 Polyketide synthase dehydratase DA68_12630 PF00698 Acyl transferase domain DA68_12630 PF16197 Ketoacyl-synthetase C-terminal extension DA68_12630 PF08659 KR domain DA68_12630 PF02801 Beta-ketoacyl synthase, C-terminal domain DA68_12630 PF00107 Zinc-binding dehydrogenase DA68_12630 PF08240 Alcohol dehydrogenase GroES-like domain DA68_12630 PF00109 Beta-ketoacyl synthase, N-terminal domain DA68_12630 PF00550 Phosphopantetheine attachment site DA68_12635 PF03413 Peptidase propeptide and YPEB domain DA68_12635 PF02868 Thermolysin metallopeptidase, alpha-helical domain DA68_12635 PF07504 Fungalysin/Thermolysin Propeptide Motif DA68_12635 PF01447 Thermolysin metallopeptidase, catalytic domain DA68_12645 PF00672 HAMP domain DA68_12645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA68_12645 PF12729 Four helix bundle sensory module for signal transduction DA68_12650 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) DA68_12655 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DA68_12655 PF01872 RibD C-terminal domain DA68_12660 PF00925 GTP cyclohydrolase II DA68_12665 PF01638 HxlR-like helix-turn-helix DA68_12675 PF03928 Haem-degrading DA68_12705 PF03960 ArsC family DA68_12710 PF00392 Bacterial regulatory proteins, gntR family DA68_12710 PF07702 UTRA domain DA68_12715 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DA68_12715 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DA68_12755 PF02567 Phenazine biosynthesis-like protein DA68_12760 PF13302 Acetyltransferase (GNAT) domain DA68_12765 PF00501 AMP-binding enzyme DA68_12765 PF13193 AMP-binding enzyme C-terminal domain DA68_12770 PF02525 Flavodoxin-like fold DA68_12775 PF01638 HxlR-like helix-turn-helix DA68_12780 PF01022 Bacterial regulatory protein, arsR family DA68_12785 PF01522 Polysaccharide deacetylase DA68_12785 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain DA68_12790 PF12791 Anti-sigma factor N-terminus DA68_12795 PF04542 Sigma-70 region 2 DA68_12800 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 DA68_12800 PF00535 Glycosyl transferase family 2 DA68_12815 PF01810 LysE type translocator DA68_12835 PF01061 ABC-2 type transporter DA68_12840 PF00005 ABC transporter DA68_12840 PF13732 Domain of unknown function (DUF4162) DA68_12855 PF03063 Prismane/CO dehydrogenase family DA68_12860 PF00753 Metallo-beta-lactamase superfamily DA68_12865 PF01183 Glycosyl hydrolases family 25 DA68_12865 PF01471 Putative peptidoglycan binding domain DA68_12920 PF00753 Metallo-beta-lactamase superfamily DA68_12925 PF00324 Amino acid permease DA68_12930 PF07690 Major Facilitator Superfamily DA68_12955 PF02585 GlcNAc-PI de-N-acetylase DA68_12960 PF08830 Protein of unknown function (DUF1806) DA68_12965 PF03600 Citrate transporter DA68_12980 PF01497 Periplasmic binding protein DA68_12985 PF01032 FecCD transport family DA68_12990 PF01032 FecCD transport family DA68_12995 PF05675 Protein of unknown function (DUF817) DA68_13000 PF13170 Protein of unknown function (DUF4003) DA68_13015 PF10901 Protein of unknown function (DUF2690) DA68_13025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA68_13025 PF03466 LysR substrate binding domain DA68_13030 PF00107 Zinc-binding dehydrogenase DA68_13030 PF08240 Alcohol dehydrogenase GroES-like domain DA68_13055 PF00488 MutS domain V DA68_13055 PF01713 Smr domain DA68_13065 PF09154 Domain of unknown function (DUF1939) DA68_13065 PF00128 Alpha amylase, catalytic domain DA68_13070 PF00797 N-acetyltransferase DA68_13075 PF01432 Peptidase family M3 DA68_13075 PF08439 Oligopeptidase F DA68_13095 PF06146 Phosphate-starvation-inducible E DA68_13100 PF04371 Porphyromonas-type peptidyl-arginine deiminase DA68_13105 PF00144 Beta-lactamase DA68_13120 PF03466 LysR substrate binding domain DA68_13120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA68_13130 PF03009 Glycerophosphoryl diester phosphodiesterase family DA68_13135 PF01494 FAD binding domain DA68_13140 PF01022 Bacterial regulatory protein, arsR family DA68_13145 PF08240 Alcohol dehydrogenase GroES-like domain DA68_13145 PF00107 Zinc-binding dehydrogenase DA68_13150 PF02696 Uncharacterized ACR, YdiU/UPF0061 family DA68_13155 PF18801 response regulator aspartate phosphatase H, N terminal DA68_13165 PF01758 Sodium Bile acid symporter family DA68_13170 PF02913 FAD linked oxidases, C-terminal domain DA68_13170 PF01565 FAD binding domain DA68_13195 PF01066 CDP-alcohol phosphatidyltransferase DA68_13205 PF00753 Metallo-beta-lactamase superfamily DA68_13205 PF00581 Rhodanese-like domain DA68_13210 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA68_13220 PF00388 Phosphatidylinositol-specific phospholipase C, X domain DA68_13225 PF18416 N-acetylglucosamine binding protein domain 2 DA68_13225 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading DA68_13235 PF03323 Bacillus/Clostridium GerA spore germination protein DA68_13255 PF00483 Nucleotidyl transferase DA68_13265 PF01370 NAD dependent epimerase/dehydratase family DA68_13270 PF16363 GDP-mannose 4,6 dehydratase DA68_13275 PF18801 response regulator aspartate phosphatase H, N terminal DA68_13285 PF02743 Cache domain DA68_13285 PF00672 HAMP domain DA68_13285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA68_13315 PF00553 Cellulose binding domain DA68_13315 PF00041 Fibronectin type III domain DA68_13315 PF00704 Glycosyl hydrolases family 18 DA68_13570 PF00082 Subtilase family DA68_13615 PF00512 His Kinase A (phospho-acceptor) domain DA68_13615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_13615 PF18719 ArlS sensor domain DA68_13620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_13620 PF00989 PAS fold DA68_13620 PF16736 Single Cache-like DA68_13620 PF00512 His Kinase A (phospho-acceptor) domain DA68_13625 PF00486 Transcriptional regulatory protein, C terminal DA68_13625 PF00072 Response regulator receiver domain DA68_13630 PF01476 LysM domain DA68_13630 PF06725 3D domain DA68_13680 PF01471 Putative peptidoglycan binding domain DA68_13680 PF01476 LysM domain DA68_13680 PF01510 N-acetylmuramoyl-L-alanine amidase DA68_13700 PF03960 ArsC family DA68_13735 PF00990 Diguanylate cyclase, GGDEF domain DA68_13735 PF00563 EAL domain DA68_13735 PF03707 Bacterial signalling protein N terminal repeat DA68_13770 PF00989 PAS fold DA68_13770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_13770 PF00512 His Kinase A (phospho-acceptor) domain DA68_13775 PF08453 Peptidase family M9 N-terminal DA68_13775 PF01752 Collagenase DA68_13775 PF18496 Collagenase G catalytic helper subdomain DA68_13780 PF02308 MgtC family DA68_13790 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DA68_13795 PF04294 VanW like protein DA68_13805 PF13039 Protein of unknown function (DUF3900) DA68_13805 PF13037 Domain of unknown function (DUF3898) DA68_13820 PF00313 'Cold-shock' DNA-binding domain DA68_13830 PF00258 Flavodoxin DA68_13840 PF00293 NUDIX domain DA68_13850 PF00132 Bacterial transferase hexapeptide (six repeats) DA68_13860 PF00106 short chain dehydrogenase DA68_13870 PF14698 Argininosuccinate lyase C-terminal DA68_13870 PF00206 Lyase DA68_13880 PF01156 Inosine-uridine preferring nucleoside hydrolase DA68_13885 PF00474 Sodium:solute symporter family DA68_13895 PF00171 Aldehyde dehydrogenase family DA68_13905 PF14151 YfhD-like protein DA68_13910 PF13249 Squalene-hopene cyclase N-terminal domain DA68_13910 PF13243 Squalene-hopene cyclase C-terminal domain DA68_13915 PF02681 Divergent PAP2 family DA68_13920 PF00892 EamA-like transporter family DA68_13925 PF06961 Protein of unknown function (DUF1294) DA68_13940 PF10609 NUBPL iron-transfer P-loop NTPase DA68_13950 PF02391 MoaE protein DA68_13955 PF03454 MoeA C-terminal region (domain IV) DA68_13955 PF00994 Probable molybdopterin binding domain DA68_13955 PF03453 MoeA N-terminal region (domain I and II) DA68_13960 PF00899 ThiF family DA68_13965 PF01226 Formate/nitrite transporter DA68_13970 PF06463 Molybdenum Cofactor Synthesis C DA68_13970 PF04055 Radical SAM superfamily DA68_13975 PF02634 FdhD/NarQ family DA68_13980 PF10057 Uncharacterized conserved protein (DUF2294) DA68_13985 PF07849 Protein of unknown function (DUF1641) DA68_13990 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DA68_13990 PF01568 Molydopterin dinucleotide binding domain DA68_13990 PF00384 Molybdopterin oxidoreductase DA68_13990 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DA68_13990 PF00037 4Fe-4S binding domain DA68_13995 PF03323 Bacillus/Clostridium GerA spore germination protein DA68_14040 PF08241 Methyltransferase domain DA68_14045 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DA68_14050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DA68_14055 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DA68_14060 PF00375 Sodium:dicarboxylate symporter family DA68_14065 PF03816 Cell envelope-related transcriptional attenuator domain DA68_14075 PF08281 Sigma-70, region 4 DA68_14075 PF04542 Sigma-70 region 2 DA68_14085 PF00005 ABC transporter DA68_14085 PF13732 Domain of unknown function (DUF4162) DA68_14095 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DA68_14095 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DA68_14100 PF00521 DNA gyrase/topoisomerase IV, subunit A DA68_14100 PF03989 DNA gyrase C-terminal domain, beta-propeller DA68_14105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_14105 PF00204 DNA gyrase B DA68_14105 PF00986 DNA gyrase B subunit, carboxyl terminus DA68_14105 PF01751 Toprim domain DA68_14110 PF13380 CoA binding domain DA68_14115 PF13180 PDZ domain DA68_14120 PF00486 Transcriptional regulatory protein, C terminal DA68_14120 PF00072 Response regulator receiver domain DA68_14125 PF04055 Radical SAM superfamily DA68_14130 PF03477 ATP cone domain DA68_14130 PF13597 Anaerobic ribonucleoside-triphosphate reductase DA68_14135 PF02660 Glycerol-3-phosphate acyltransferase DA68_14140 PF01521 Iron-sulphur cluster biosynthesis DA68_14145 PF03061 Thioesterase superfamily DA68_14150 PF00704 Glycosyl hydrolases family 18 DA68_14150 PF01476 LysM domain DA68_14160 PF08177 Small acid-soluble spore protein N family DA68_14165 PF13040 Fur-regulated basic protein B DA68_14170 PF02811 PHP domain DA68_14170 PF01336 OB-fold nucleic acid binding domain DA68_14170 PF00929 Exonuclease DA68_14170 PF14579 Helix-hairpin-helix motif DA68_14170 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DA68_14170 PF07733 Bacterial DNA polymerase III alpha NTPase domain DA68_14170 PF11490 DNA polymerase III polC-type N-terminus II DA68_14175 PF00578 AhpC/TSA family DA68_14185 PF00005 ABC transporter DA68_14185 PF00664 ABC transporter transmembrane region DA68_14190 PF00694 Aconitase C-terminal domain DA68_14190 PF00330 Aconitase family (aconitate hydratase) DA68_14200 PF01522 Polysaccharide deacetylase DA68_14210 PF08179 Small acid-soluble spore protein P family DA68_14220 PF07690 Major Facilitator Superfamily DA68_14230 PF01411 tRNA synthetases class II (A) DA68_14230 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DA68_14230 PF02272 DHHA1 domain DA68_14235 PF13344 Haloacid dehalogenase-like hydrolase DA68_14235 PF00293 NUDIX domain DA68_14255 PF00108 Thiolase, N-terminal domain DA68_14255 PF02803 Thiolase, C-terminal domain DA68_14260 PF13193 AMP-binding enzyme C-terminal domain DA68_14260 PF00501 AMP-binding enzyme DA68_14265 PF02632 BioY family DA68_14270 PF00501 AMP-binding enzyme DA68_14270 PF13193 AMP-binding enzyme C-terminal domain DA68_14275 PF01381 Helix-turn-helix DA68_14295 PF05532 CsbD-like DA68_14315 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DA68_14315 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DA68_14325 PF13426 PAS domain DA68_14325 PF13188 PAS domain DA68_14325 PF00989 PAS fold DA68_14325 PF00512 His Kinase A (phospho-acceptor) domain DA68_14325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_14330 PF01738 Dienelactone hydrolase family DA68_14335 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DA68_14340 PF00474 Sodium:solute symporter family DA68_14350 PF01645 Conserved region in glutamate synthase DA68_14355 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DA68_14360 PF02559 CarD-like/TRCF domain DA68_14365 PF00491 Arginase family DA68_14370 PF01979 Amidohydrolase family DA68_14375 PF17391 Urocanase N-terminal domain DA68_14375 PF01175 Urocanase Rossmann-like domain DA68_14375 PF17392 Urocanase C-terminal domain DA68_14380 PF00221 Aromatic amino acid lyase DA68_14385 PF09021 HutP DA68_14390 PF01209 ubiE/COQ5 methyltransferase family DA68_14410 PF11084 Protein of unknown function (DUF2621) DA68_14415 PF07301 Protein of unknown function (DUF1453) DA68_14420 PF02683 Cytochrome C biogenesis protein transmembrane region DA68_14440 PF00005 ABC transporter DA68_14455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA68_14455 PF03466 LysR substrate binding domain DA68_14460 PF03788 LrgA family DA68_14465 PF04172 LrgB-like family DA68_14470 PF00293 NUDIX domain DA68_14470 PF13344 Haloacid dehalogenase-like hydrolase DA68_14480 PF01925 Sulfite exporter TauE/SafE DA68_14500 PF08239 Bacterial SH3 domain DA68_14500 PF01183 Glycosyl hydrolases family 25 DA68_14505 PF00005 ABC transporter DA68_14505 PF00664 ABC transporter transmembrane region DA68_14510 PF00005 ABC transporter DA68_14510 PF00664 ABC transporter transmembrane region DA68_14515 PF03672 Uncharacterised protein family (UPF0154) DA68_14520 PF10747 Sporulation inhibitor of replication protein SirA DA68_14525 PF02779 Transketolase, pyrimidine binding domain DA68_14525 PF02780 Transketolase, C-terminal domain DA68_14525 PF00456 Transketolase, thiamine diphosphate binding domain DA68_14530 PF00528 Binding-protein-dependent transport system inner membrane component DA68_14535 PF00528 Binding-protein-dependent transport system inner membrane component DA68_14540 PF00005 ABC transporter DA68_14545 PF00497 Bacterial extracellular solute-binding proteins, family 3 DA68_14550 PF02872 5'-nucleotidase, C-terminal domain DA68_14550 PF00149 Calcineurin-like phosphoesterase DA68_14555 PF05979 Bacterial protein of unknown function (DUF896) DA68_14560 PF00239 Resolvase, N terminal domain DA68_14565 PF01726 LexA DNA binding domain DA68_14565 PF00717 Peptidase S24-like DA68_14580 PF03551 Transcriptional regulator PadR-like family DA68_14585 PF03951 Glutamine synthetase, beta-Grasp domain DA68_14585 PF00120 Glutamine synthetase, catalytic domain DA68_14590 PF13411 MerR HTH family regulatory protein DA68_14595 PF06838 Methionine gamma-lyase DA68_14600 PF01926 50S ribosome-binding GTPase DA68_14600 PF13167 GTP-binding GTPase N-terminal DA68_14600 PF16360 GTP-binding GTPase Middle Region DA68_14605 PF03458 UPF0126 domain DA68_14615 PF17866 AAA lid domain DA68_14615 PF00004 ATPase family associated with various cellular activities (AAA) DA68_14630 PF17209 Hfq protein DA68_14645 PF01476 LysM domain DA68_14645 PF06725 3D domain DA68_14650 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DA68_14650 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DA68_14655 PF00294 pfkB family carbohydrate kinase DA68_14660 PF08220 DeoR-like helix-turn-helix domain DA68_14660 PF00455 DeoR C terminal sensor domain DA68_14665 PF00465 Iron-containing alcohol dehydrogenase DA68_14670 PF04238 Protein of unknown function (DUF420) DA68_14685 PF00324 Amino acid permease DA68_14690 PF00041 Fibronectin type III domain DA68_14690 PF00704 Glycosyl hydrolases family 18 DA68_14695 PF00149 Calcineurin-like phosphoesterase DA68_14695 PF10518 TAT (twin-arginine translocation) pathway signal sequence DA68_14700 PF01226 Formate/nitrite transporter DA68_14705 PF00216 Bacterial DNA-binding protein DA68_14715 PF00403 Heavy-metal-associated domain DA68_14720 PF00403 Heavy-metal-associated domain DA68_14725 PF02583 Metal-sensitive transcriptional repressor DA68_14730 PF03180 NLPA lipoprotein DA68_14740 PF00756 Putative esterase DA68_14745 PF00005 ABC transporter DA68_14750 PF01032 FecCD transport family DA68_14755 PF01032 FecCD transport family DA68_14760 PF01497 Periplasmic binding protein DA68_14765 PF02805 Metal binding domain of Ada DA68_14765 PF12833 Helix-turn-helix domain DA68_14770 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DA68_14770 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DA68_14775 PF00730 HhH-GPD superfamily base excision DNA repair protein DA68_14775 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain DA68_14780 PF07687 Peptidase dimerisation domain DA68_14780 PF01546 Peptidase family M20/M25/M40 DA68_14800 PF00561 alpha/beta hydrolase fold DA68_14805 PF00563 EAL domain DA68_14805 PF03707 Bacterial signalling protein N terminal repeat DA68_14805 PF00990 Diguanylate cyclase, GGDEF domain DA68_14810 PF04101 Glycosyltransferase family 28 C-terminal domain DA68_14810 PF03033 Glycosyltransferase family 28 N-terminal domain DA68_14820 PF16363 GDP-mannose 4,6 dehydratase DA68_14825 PF08485 Polysaccharide biosynthesis protein C-terminal DA68_14825 PF02719 Polysaccharide biosynthesis protein DA68_14835 PF10787 Uncharacterised protein from bacillus cereus group DA68_14840 PF04172 LrgB-like family DA68_14845 PF03788 LrgA family DA68_14850 PF00392 Bacterial regulatory proteins, gntR family DA68_14850 PF00155 Aminotransferase class I and II DA68_14860 PF07702 UTRA domain DA68_14860 PF00392 Bacterial regulatory proteins, gntR family DA68_14865 PF00232 Glycosyl hydrolase family 1 DA68_14870 PF00388 Phosphatidylinositol-specific phospholipase C, X domain DA68_14875 PF00082 Subtilase family DA68_14880 PF07486 Cell Wall Hydrolase DA68_14890 PF00884 Sulfatase DA68_14895 PF00350 Dynamin family DA68_14905 PF08676 MutL C terminal dimerisation domain DA68_14905 PF01119 DNA mismatch repair protein, C-terminal domain DA68_14910 PF05192 MutS domain III DA68_14910 PF05190 MutS family domain IV DA68_14910 PF05188 MutS domain II DA68_14910 PF01624 MutS domain I DA68_14910 PF00488 MutS domain V DA68_14915 PF10628 Outer spore coat protein E (CotE) DA68_14920 PF06133 Control of competence regulator ComK, YlbF/YmcA DA68_14925 PF04055 Radical SAM superfamily DA68_14925 PF00919 Uncharacterized protein family UPF0004 DA68_14925 PF01938 TRAM domain DA68_14930 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DA68_14935 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DA68_14935 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DA68_14935 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DA68_14940 PF01244 Membrane dipeptidase (Peptidase family M19) DA68_14945 PF04232 Stage V sporulation protein S (SpoVS) DA68_14950 PF13277 YmdB-like protein DA68_14955 PF01966 HD domain DA68_14955 PF00013 KH domain DA68_14955 PF12072 Domain of unknown function (DUF3552) DA68_14970 PF18146 Damage-inducible protein CinA KH domain DA68_14970 PF02464 Competence-damaged protein DA68_14970 PF00994 Probable molybdopterin binding domain DA68_14975 PF01066 CDP-alcohol phosphatidyltransferase DA68_14980 PF13464 Domain of unknown function (DUF4115) DA68_14985 PF11868 Protein of unknown function (DUF3388) DA68_14990 PF11588 Protein of unknown function (DUF3243) DA68_15000 PF05193 Peptidase M16 inactive domain DA68_15000 PF00675 Insulinase (Peptidase family M16) DA68_15005 PF05193 Peptidase M16 inactive domain DA68_15030 PF00392 Bacterial regulatory proteins, gntR family DA68_15030 PF07702 UTRA domain DA68_15035 PF09397 Ftsk gamma domain DA68_15035 PF01580 FtsK/SpoIIIE family DA68_15035 PF17854 FtsK alpha domain DA68_15040 PF14035 YlzJ-like protein DA68_15045 PF00574 Clp protease DA68_15050 PF17770 Ribonuclease J C-terminal domain DA68_15050 PF00753 Metallo-beta-lactamase superfamily DA68_15050 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DA68_15055 PF00701 Dihydrodipicolinate synthetase family DA68_15060 PF13840 ACT domain DA68_15060 PF00696 Amino acid kinase family DA68_15065 PF01118 Semialdehyde dehydrogenase, NAD binding domain DA68_15065 PF02774 Semialdehyde dehydrogenase, dimerisation domain DA68_15070 PF02441 Flavoprotein DA68_15075 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DA68_15075 PF16924 Dipicolinate synthase subunit A N-terminal domain DA68_15080 PF05239 PRC-barrel domain DA68_15085 PF00675 Insulinase (Peptidase family M16) DA68_15085 PF05193 Peptidase M16 inactive domain DA68_15090 PF01522 Polysaccharide deacetylase DA68_15095 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DA68_15095 PF00013 KH domain DA68_15095 PF01138 3' exoribonuclease family, domain 1 DA68_15095 PF03725 3' exoribonuclease family, domain 2 DA68_15095 PF00575 S1 RNA binding domain DA68_15100 PF00312 Ribosomal protein S15 DA68_15105 PF06574 FAD synthetase DA68_15105 PF01687 Riboflavin kinase DA68_15110 PF16198 tRNA pseudouridylate synthase B C-terminal domain DA68_15110 PF01509 TruB family pseudouridylate synthase (N terminal domain) DA68_15115 PF02033 Ribosome-binding factor A DA68_15120 PF04456 Protein of unknown function (DUF503) DA68_15125 PF04760 Translation initiation factor IF-2, N-terminal region DA68_15125 PF11987 Translation-initiation factor 2 DA68_15125 PF00009 Elongation factor Tu GTP binding domain DA68_15130 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family DA68_15135 PF04296 Protein of unknown function (DUF448) DA68_15140 PF08529 NusA N-terminal domain DA68_15140 PF00575 S1 RNA binding domain DA68_15140 PF13184 NusA-like KH domain DA68_15145 PF17384 RimP C-terminal SH3 domain DA68_15145 PF02576 RimP N-terminal domain DA68_15150 PF14480 DNA polymerase III polC-type N-terminus I DA68_15150 PF02811 PHP domain DA68_15150 PF14579 Helix-hairpin-helix motif DA68_15150 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DA68_15150 PF07733 Bacterial DNA polymerase III alpha NTPase domain DA68_15150 PF11490 DNA polymerase III polC-type N-terminus II DA68_15150 PF00929 Exonuclease DA68_15155 PF03129 Anticodon binding domain DA68_15155 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DA68_15155 PF04073 Aminoacyl-tRNA editing domain DA68_15160 PF17820 PDZ domain DA68_15160 PF02163 Peptidase family M50 DA68_15165 PF13288 DXP reductoisomerase C-terminal domain DA68_15165 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DA68_15165 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DA68_15175 PF01255 Putative undecaprenyl diphosphate synthase DA68_15180 PF01765 Ribosome recycling factor DA68_15185 PF00696 Amino acid kinase family DA68_15190 PF00889 Elongation factor TS DA68_15195 PF00318 Ribosomal protein S2 DA68_15200 PF06018 CodY GAF-like domain DA68_15200 PF08222 CodY helix-turn-helix domain DA68_15205 PF00004 ATPase family associated with various cellular activities (AAA) DA68_15205 PF10431 C-terminal, D2-small domain, of ClpB protein DA68_15205 PF07724 AAA domain (Cdc48 subfamily) DA68_15210 PF00227 Proteasome subunit DA68_15215 PF02899 Phage integrase, N-terminal SAM-like domain DA68_15215 PF00589 Phage integrase family DA68_15220 PF01134 Glucose inhibited division protein A DA68_15225 PF01396 Topoisomerase DNA binding C4 zinc finger DA68_15225 PF01751 Toprim domain DA68_15225 PF01131 DNA topoisomerase DA68_15230 PF02481 DNA recombination-mediator protein A DA68_15235 PF00549 CoA-ligase DA68_15235 PF02629 CoA binding domain DA68_15240 PF00549 CoA-ligase DA68_15240 PF08442 ATP-grasp domain DA68_15245 PF01351 Ribonuclease HII DA68_15250 PF01926 50S ribosome-binding GTPase DA68_15255 PF10502 Signal peptidase, peptidase S26 DA68_15260 PF01245 Ribosomal protein L19 DA68_15265 PF01746 tRNA (Guanine-1)-methyltransferase DA68_15270 PF01782 RimM N-terminal domain DA68_15270 PF05239 PRC-barrel domain DA68_15280 PF00886 Ribosomal protein S16 DA68_15285 PF02881 SRP54-type protein, helical bundle domain DA68_15285 PF00448 SRP54-type protein, GTPase domain DA68_15285 PF02978 Signal peptide binding domain DA68_15290 PF04297 Putative helix-turn-helix protein, YlxM / p13 like DA68_15295 PF00448 SRP54-type protein, GTPase domain DA68_15295 PF02881 SRP54-type protein, helical bundle domain DA68_15300 PF02463 RecF/RecN/SMC N terminal domain DA68_15300 PF06470 SMC proteins Flexible Hinge Domain DA68_15305 PF14622 Ribonuclease-III-like DA68_15305 PF00035 Double-stranded RNA binding motif DA68_15310 PF00550 Phosphopantetheine attachment site DA68_15320 PF00698 Acyl transferase domain DA68_15325 PF02504 Fatty acid synthesis protein DA68_15330 PF03061 Thioesterase superfamily DA68_15335 PF17191 RecG wedge domain DA68_15335 PF00271 Helicase conserved C-terminal domain DA68_15335 PF00270 DEAD/DEAH box helicase DA68_15340 PF02734 DAK2 domain DA68_15340 PF13684 Dihydroxyacetone kinase family DA68_15345 PF03780 Asp23 family, cell envelope-related function DA68_15350 PF00830 Ribosomal L28 family DA68_15355 PF08183 Stage V sporulation protein family DA68_15360 PF04263 Thiamin pyrophosphokinase, catalytic domain DA68_15360 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain DA68_15365 PF00834 Ribulose-phosphate 3 epimerase family DA68_15370 PF16745 RsgA N-terminal domain DA68_15370 PF03193 RsgA GTPase DA68_15375 PF00069 Protein kinase domain DA68_15375 PF03793 PASTA domain DA68_15385 PF04055 Radical SAM superfamily DA68_15390 PF01029 NusB family DA68_15390 PF01189 16S rRNA methyltransferase RsmB/F DA68_15395 PF02911 Formyl transferase, C-terminal domain DA68_15395 PF00551 Formyl transferase DA68_15400 PF01327 Polypeptide deformylase DA68_15405 PF04851 Type III restriction enzyme, res subunit DA68_15405 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DA68_15405 PF18074 Primosomal protein N C-terminal domain DA68_15405 PF17764 3′ DNA-binding domain (3′BD) DA68_15405 PF00271 Helicase conserved C-terminal domain DA68_15410 PF04127 DNA / pantothenate metabolism flavoprotein DA68_15410 PF02441 Flavoprotein DA68_15415 PF01192 RNA polymerase Rpb6 DA68_15420 PF00625 Guanylate kinase DA68_15425 PF04025 Domain of unknown function (DUF370) DA68_15430 PF08340 Domain of unknown function (DUF1732) DA68_15430 PF03755 YicC-like family, N-terminal region DA68_15435 PF00689 Cation transporting ATPase, C-terminus DA68_15435 PF00690 Cation transporter/ATPase, N-terminus DA68_15450 PF00557 Metallopeptidase family M24 DA68_15450 PF01321 Creatinase/Prolidase N-terminal domain DA68_15480 PF00156 Phosphoribosyl transferase domain DA68_15485 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DA68_15490 PF01180 Dihydroorotate dehydrogenase DA68_15495 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B DA68_15500 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DA68_15500 PF02142 MGS-like domain DA68_15500 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DA68_15505 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DA68_15505 PF00117 Glutamine amidotransferase class-I DA68_15510 PF01979 Amidohydrolase family DA68_15515 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DA68_15515 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DA68_15520 PF00860 Permease family DA68_15525 PF00156 Phosphoribosyl transferase domain DA68_15530 PF01479 S4 domain DA68_15530 PF00849 RNA pseudouridylate synthase DA68_15535 PF01252 Signal peptidase (SPase) II DA68_15545 PF00133 tRNA synthetases class I (I, L, M and V) DA68_15545 PF08264 Anticodon-binding domain of tRNA DA68_15545 PF06827 Zinc finger found in FPG and IleRS DA68_15550 PF05103 DivIVA protein DA68_15555 PF01479 S4 domain DA68_15555 PF17774 Putative RNA-binding domain in YlmH DA68_15560 PF02325 YGGT family DA68_15565 PF04472 Cell division protein SepF DA68_15570 PF01168 Alanine racemase, N-terminal domain DA68_15580 PF05239 PRC-barrel domain DA68_15585 PF04545 Sigma-70, region 4 DA68_15585 PF04539 Sigma-70 region 3 DA68_15585 PF04542 Sigma-70 region 2 DA68_15590 PF04542 Sigma-70 region 2 DA68_15590 PF04545 Sigma-70, region 4 DA68_15595 PF03419 Sporulation factor SpoIIGA DA68_15600 PF12327 FtsZ family, C-terminal domain DA68_15600 PF00091 Tubulin/FtsZ family, GTPase domain DA68_15605 PF02491 SHS2 domain inserted in FTSA DA68_15610 PF08478 POTRA domain, FtsQ-type DA68_15610 PF03799 Cell division protein FtsQ DA68_15615 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DA68_15615 PF01565 FAD binding domain DA68_15620 PF04101 Glycosyltransferase family 28 C-terminal domain DA68_15620 PF03033 Glycosyltransferase family 28 N-terminal domain DA68_15625 PF01098 Cell cycle protein DA68_15630 PF08245 Mur ligase middle domain DA68_15630 PF02875 Mur ligase family, glutamate ligase domain DA68_15635 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DA68_15635 PF00953 Glycosyl transferase family 4 DA68_15640 PF02875 Mur ligase family, glutamate ligase domain DA68_15640 PF01225 Mur ligase family, catalytic domain DA68_15640 PF08245 Mur ligase middle domain DA68_15645 PF00905 Penicillin binding protein transpeptidase domain DA68_15645 PF03793 PASTA domain DA68_15645 PF03717 Penicillin-binding Protein dimerisation domain DA68_15655 PF04977 Septum formation initiator DA68_15660 PF01795 MraW methylase family DA68_15665 PF10079 Bacillithiol biosynthesis BshC DA68_15670 PF08546 Ketopantoate reductase PanE/ApbA C terminal DA68_15670 PF02558 Ketopantoate reductase PanE/ApbA DA68_15675 PF00583 Acetyltransferase (GNAT) family DA68_15685 PF01783 Ribosomal L32p protein family DA68_15690 PF02620 Large ribosomal RNA subunit accumulation protein YceD DA68_15695 PF05636 HIGH Nucleotidyl Transferase DA68_15700 PF05362 Lon protease (S16) C-terminal proteolytic domain DA68_15700 PF13180 PDZ domain DA68_15705 PF01734 Patatin-like phospholipase DA68_15710 PF07670 Nucleoside recognition DA68_15715 PF01467 Cytidylyltransferase-like DA68_15730 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) DA68_15735 PF06133 Control of competence regulator ComK, YlbF/YmcA DA68_15740 PF00300 Histidine phosphatase superfamily (branch 1) DA68_15745 PF14003 YlbE-like protein DA68_15750 PF14071 Putative coat protein DA68_15755 PF00188 Cysteine-rich secretory protein family DA68_15755 PF14504 CAP-associated N-terminal DA68_15760 PF08868 YugN-like family DA68_15765 PF00795 Carbon-nitrogen hydrolase DA68_15770 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) DA68_15775 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DA68_15780 PF00510 Cytochrome c oxidase subunit III DA68_15785 PF00115 Cytochrome C and Quinol oxidase polypeptide I DA68_15790 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DA68_15790 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DA68_15790 PF00034 Cytochrome c DA68_15795 PF01040 UbiA prenyltransferase family DA68_15800 PF02628 Cytochrome oxidase assembly protein DA68_15805 PF00289 Biotin carboxylase, N-terminal domain DA68_15805 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DA68_15805 PF00682 HMGL-like DA68_15805 PF00364 Biotin-requiring enzyme DA68_15805 PF02785 Biotin carboxylase C-terminal domain DA68_15805 PF02436 Conserved carboxylase domain DA68_15810 PF01098 Cell cycle protein DA68_15815 PF07408 Protein of unknown function (DUF1507) DA68_15825 PF02562 PhoH-like protein DA68_15825 PF13638 PIN domain DA68_15835 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) DA68_15845 PF14036 YlaH-like protein DA68_15860 PF00459 Inositol monophosphatase family DA68_15870 PF06335 Protein of unknown function (DUF1054) DA68_15875 PF05256 Uncharacterised protein family (UPF0223) DA68_15880 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DA68_15880 PF01276 Orn/Lys/Arg decarboxylase, major domain DA68_15920 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA68_15920 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DA68_15925 PF02817 e3 binding domain DA68_15925 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DA68_15925 PF00364 Biotin-requiring enzyme DA68_15930 PF02780 Transketolase, C-terminal domain DA68_15930 PF02779 Transketolase, pyrimidine binding domain DA68_15935 PF00676 Dehydrogenase E1 component DA68_15945 PF01327 Polypeptide deformylase DA68_15960 PF00753 Metallo-beta-lactamase superfamily DA68_15960 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DA68_15960 PF17770 Ribonuclease J C-terminal domain DA68_15965 PF02080 TrkA-C domain DA68_15965 PF02254 TrkA-N domain DA68_15975 PF07687 Peptidase dimerisation domain DA68_15975 PF01546 Peptidase family M20/M25/M40 DA68_15980 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal DA68_15980 PF00132 Bacterial transferase hexapeptide (six repeats) DA68_15980 PF14602 Hexapeptide repeat of succinyl-transferase DA68_15985 PF03466 LysR substrate binding domain DA68_15985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA68_16000 PF04308 Ribonuclease H-like DA68_16010 PF08796 Protein of unknown function (DUF1797) DA68_16025 PF00563 EAL domain DA68_16025 PF10388 EAL-domain associated signalling protein domain DA68_16035 PF00149 Calcineurin-like phosphoesterase DA68_16035 PF10518 TAT (twin-arginine translocation) pathway signal sequence DA68_16045 PF17941 Polyphosphate kinase C-terminal domain 1 DA68_16045 PF02503 Polyphosphate kinase middle domain DA68_16045 PF13090 Polyphosphate kinase C-terminal domain 2 DA68_16045 PF13089 Polyphosphate kinase N-terminal domain DA68_16050 PF02541 Ppx/GppA phosphatase family DA68_16055 PF14177 YkyB-like protein DA68_16080 PF07690 Major Facilitator Superfamily DA68_16090 PF08267 Cobalamin-independent synthase, N-terminal domain DA68_16090 PF01717 Cobalamin-independent synthase, Catalytic domain DA68_16100 PF14040 Deoxyribonuclease NucA/NucB DA68_16110 PF00512 His Kinase A (phospho-acceptor) domain DA68_16110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_16120 PF00155 Aminotransferase class I and II DA68_16125 PF00356 Bacterial regulatory proteins, lacI family DA68_16125 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DA68_16130 PF00528 Binding-protein-dependent transport system inner membrane component DA68_16135 PF00528 Binding-protein-dependent transport system inner membrane component DA68_16140 PF13416 Bacterial extracellular solute-binding protein DA68_16145 PF02903 Alpha amylase, N-terminal ig-like domain DA68_16145 PF00128 Alpha amylase, catalytic domain DA68_16145 PF16657 Maltogenic Amylase, C-terminal domain DA68_16150 PF00128 Alpha amylase, catalytic domain DA68_16150 PF16657 Maltogenic Amylase, C-terminal domain DA68_16155 PF00005 ABC transporter DA68_16155 PF03459 TOBE domain DA68_16155 PF17912 MalK OB fold domain DA68_16195 PF02803 Thiolase, C-terminal domain DA68_16195 PF00108 Thiolase, N-terminal domain DA68_16200 PF00293 NUDIX domain DA68_16225 PF03551 Transcriptional regulator PadR-like family DA68_16245 PF01636 Phosphotransferase enzyme family DA68_16250 PF00795 Carbon-nitrogen hydrolase DA68_16255 PF00155 Aminotransferase class I and II DA68_16260 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain DA68_16260 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain DA68_16270 PF00596 Class II Aldolase and Adducin N-terminal domain DA68_16275 PF03079 ARD/ARD' family DA68_16290 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DA68_16290 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DA68_16295 PF00144 Beta-lactamase DA68_16300 PF00990 Diguanylate cyclase, GGDEF domain DA68_16305 PF00881 Nitroreductase family DA68_16320 PF02896 PEP-utilising enzyme, TIM barrel domain DA68_16320 PF00391 PEP-utilising enzyme, mobile domain DA68_16320 PF05524 PEP-utilising enzyme, N-terminal DA68_16325 PF00381 PTS HPr component phosphorylation site DA68_16330 PF02378 Phosphotransferase system, EIIC DA68_16330 PF00367 phosphotransferase system, EIIB DA68_16330 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DA68_16335 PF00874 PRD domain DA68_16335 PF03123 CAT RNA binding domain DA68_16350 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DA68_16355 PF01979 Amidohydrolase family DA68_16365 PF04079 Segregation and condensation complex subunit ScpB DA68_16370 PF02616 Segregation and condensation protein ScpA DA68_16380 PF03745 Domain of unknown function (DUF309) DA68_16385 PF00583 Acetyltransferase (GNAT) family DA68_16390 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DA68_16395 PF06207 Protein of unknown function (DUF1002) DA68_16405 PF03323 Bacillus/Clostridium GerA spore germination protein DA68_16410 PF14097 Stage V sporulation protein AE1 DA68_16415 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DA68_16420 PF07451 Stage V sporulation protein AD (SpoVAD) DA68_16425 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DA68_16430 PF13782 Stage V sporulation protein AB DA68_16435 PF12164 Stage V sporulation protein AA DA68_16445 PF00209 Sodium:neurotransmitter symporter family DA68_16450 PF04542 Sigma-70 region 2 DA68_16450 PF04539 Sigma-70 region 3 DA68_16450 PF04545 Sigma-70, region 4 DA68_16455 PF13581 Histidine kinase-like ATPase domain DA68_16460 PF01740 STAS domain DA68_16465 PF00768 D-alanyl-D-alanine carboxypeptidase DA68_16465 PF07943 Penicillin-binding protein 5, C-terminal domain DA68_16470 PF00392 Bacterial regulatory proteins, gntR family DA68_16475 PF00005 ABC transporter DA68_16495 PF01047 MarR family DA68_16505 PF00860 Permease family DA68_16510 PF01544 CorA-like Mg2+ transporter protein DA68_16515 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DA68_16515 PF00591 Glycosyl transferase family, a/b domain DA68_16515 PF02885 Glycosyl transferase family, helical bundle domain DA68_16520 PF01048 Phosphorylase superfamily DA68_16525 PF01676 Metalloenzyme superfamily DA68_16530 PF13115 YtkA-like DA68_16535 PF00589 Phage integrase family DA68_16535 PF02899 Phage integrase, N-terminal SAM-like domain DA68_16540 PF14004 Protein of unknown function (DUF4227) DA68_16545 PF01475 Ferric uptake regulator family DA68_16550 PF01944 Stage II sporulation protein M DA68_16560 PF00293 NUDIX domain DA68_16565 PF13072 Mother cell inhibitor of FtsZ DA68_16570 PF00248 Aldo/keto reductase family DA68_16575 PF00248 Aldo/keto reductase family DA68_16580 PF13673 Acetyltransferase (GNAT) domain DA68_16580 PF04229 GrpB protein DA68_16590 PF00565 Staphylococcal nuclease homologue DA68_16590 PF00149 Calcineurin-like phosphoesterase DA68_16590 PF00746 LPXTG cell wall anchor motif DA68_16590 PF02872 5'-nucleotidase, C-terminal domain DA68_16600 PF12146 Serine aminopeptidase, S33 DA68_16605 PF13726 Na+-H+ antiporter family DA68_16605 PF03553 Na+/H+ antiporter family DA68_16610 PF00356 Bacterial regulatory proteins, lacI family DA68_16615 PF00583 Acetyltransferase (GNAT) family DA68_16620 PF12146 Serine aminopeptidase, S33 DA68_16625 PF10827 Protein of unknown function (DUF2552) DA68_16635 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DA68_16635 PF01872 RibD C-terminal domain DA68_16640 PF00677 Lumazine binding domain DA68_16645 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DA68_16645 PF00925 GTP cyclohydrolase II DA68_16650 PF00885 6,7-dimethyl-8-ribityllumazine synthase DA68_16660 PF04055 Radical SAM superfamily DA68_16660 PF06968 Biotin and Thiamin Synthesis associated domain DA68_16665 PF13847 Methyltransferase domain DA68_16670 PF08241 Methyltransferase domain DA68_16670 PF12697 Alpha/beta hydrolase family DA68_16675 PF00155 Aminotransferase class I and II DA68_16685 PF00202 Aminotransferase class-III DA68_16700 PF00149 Calcineurin-like phosphoesterase DA68_16700 PF02872 5'-nucleotidase, C-terminal domain DA68_16710 PF01037 Lrp/AsnC ligand binding domain DA68_16710 PF13404 AsnC-type helix-turn-helix domain DA68_16725 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DA68_16725 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DA68_16730 PF00202 Aminotransferase class-III DA68_16735 PF00696 Amino acid kinase family DA68_16740 PF01960 ArgJ family DA68_16745 PF02774 Semialdehyde dehydrogenase, dimerisation domain DA68_16745 PF01118 Semialdehyde dehydrogenase, NAD binding domain DA68_16755 PF00106 short chain dehydrogenase DA68_16760 PF00753 Metallo-beta-lactamase superfamily DA68_16765 PF14748 Pyrroline-5-carboxylate reductase dimerisation DA68_16765 PF03807 NADP oxidoreductase coenzyme F420-dependent DA68_16770 PF03313 Serine dehydratase alpha chain DA68_16775 PF03315 Serine dehydratase beta chain DA68_16775 PF01842 ACT domain DA68_16780 PF00753 Metallo-beta-lactamase superfamily DA68_16780 PF12706 Beta-lactamase superfamily domain DA68_16795 PF00690 Cation transporter/ATPase, N-terminus DA68_16795 PF00689 Cation transporting ATPase, C-terminus DA68_16800 PF11798 IMS family HHH motif DA68_16800 PF00817 impB/mucB/samB family DA68_16800 PF11799 impB/mucB/samB family C-terminal domain DA68_16805 PF01546 Peptidase family M20/M25/M40 DA68_16805 PF07687 Peptidase dimerisation domain DA68_16810 PF13302 Acetyltransferase (GNAT) domain DA68_16820 PF03734 L,D-transpeptidase catalytic domain DA68_16825 PF11728 Putative aromatic acid exporter C-terminal domain DA68_16825 PF06081 Aromatic acid exporter family member 1 DA68_16830 PF00005 ABC transporter DA68_16835 PF00528 Binding-protein-dependent transport system inner membrane component DA68_16840 PF00497 Bacterial extracellular solute-binding proteins, family 3 DA68_16845 PF06491 Disulphide isomerase DA68_16850 PF11208 Protein of unknown function (DUF2992) DA68_16855 PF00293 NUDIX domain DA68_16855 PF09297 NADH pyrophosphatase zinc ribbon domain DA68_16860 PF04239 Protein of unknown function (DUF421) DA68_16865 PF01098 Cell cycle protein DA68_16870 PF00364 Biotin-requiring enzyme DA68_16870 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DA68_16870 PF02817 e3 binding domain DA68_16875 PF02779 Transketolase, pyrimidine binding domain DA68_16875 PF02780 Transketolase, C-terminal domain DA68_16880 PF00676 Dehydrogenase E1 component DA68_16885 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DA68_16885 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA68_16890 PF00871 Acetokinase family DA68_16895 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DA68_16895 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DA68_16900 PF01515 Phosphate acetyl/butaryl transferase DA68_16905 PF00989 PAS fold DA68_16905 PF00158 Sigma-54 interaction domain DA68_16905 PF02954 Bacterial regulatory protein, Fis family DA68_16915 PF03009 Glycerophosphoryl diester phosphodiesterase family DA68_16920 PF14174 YycC-like protein DA68_16930 PF00072 Response regulator receiver domain DA68_16930 PF08769 Sporulation initiation factor Spo0A C terminal DA68_16935 PF05580 SpoIVB peptidase S55 DA68_16935 PF17820 PDZ domain DA68_16940 PF13476 AAA domain DA68_16945 PF02863 Arginine repressor, C-terminal domain DA68_16945 PF01316 Arginine repressor, DNA binding domain DA68_16950 PF01479 S4 domain DA68_16950 PF01728 FtsJ-like methyltransferase DA68_16955 PF02779 Transketolase, pyrimidine binding domain DA68_16955 PF02780 Transketolase, C-terminal domain DA68_16955 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DA68_16960 PF00348 Polyprenyl synthetase DA68_16965 PF02609 Exonuclease VII small subunit DA68_16970 PF13742 OB-fold nucleic acid binding domain DA68_16970 PF02601 Exonuclease VII, large subunit DA68_16975 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DA68_16975 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DA68_16980 PF01029 NusB family DA68_16985 PF03780 Asp23 family, cell envelope-related function DA68_16990 PF00289 Biotin carboxylase, N-terminal domain DA68_16990 PF02785 Biotin carboxylase C-terminal domain DA68_16990 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DA68_16995 PF00364 Biotin-requiring enzyme DA68_17000 PF12685 SpoIIIAH-like protein DA68_17010 PF09581 Stage III sporulation protein AF (Spore_III_AF) DA68_17015 PF09546 Stage III sporulation protein AE (spore_III_AE) DA68_17020 PF06686 Stage III sporulation protein AC/AD protein family DA68_17025 PF06686 Stage III sporulation protein AC/AD protein family DA68_17030 PF09548 Stage III sporulation protein AB (spore_III_AB) DA68_17055 PF01132 Elongation factor P (EF-P) OB domain DA68_17055 PF08207 Elongation factor P (EF-P) KOW-like domain DA68_17055 PF09285 Elongation factor P, C-terminal DA68_17060 PF00557 Metallopeptidase family M24 DA68_17060 PF01321 Creatinase/Prolidase N-terminal domain DA68_17065 PF01220 Dehydroquinase class II DA68_17070 PF11085 Conserved membrane protein YqhR DA68_17075 PF07136 Protein of unknown function (DUF1385) DA68_17085 PF13419 Haloacid dehalogenase-like hydrolase DA68_17090 PF02742 Iron dependent repressor, metal binding and dimerisation domain DA68_17090 PF01325 Iron dependent repressor, N-terminal DNA binding domain DA68_17110 PF03099 Biotin/lipoate A/B protein ligase family DA68_17115 PF00581 Rhodanese-like domain DA68_17125 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DA68_17125 PF00356 Bacterial regulatory proteins, lacI family DA68_17135 PF00893 Small Multidrug Resistance protein DA68_17140 PF00893 Small Multidrug Resistance protein DA68_17170 PF00005 ABC transporter DA68_17175 PF00392 Bacterial regulatory proteins, gntR family DA68_17190 PF02347 Glycine cleavage system P-protein DA68_17195 PF02347 Glycine cleavage system P-protein DA68_17200 PF01571 Aminomethyltransferase folate-binding domain DA68_17200 PF08669 Glycine cleavage T-protein C-terminal barrel domain DA68_17205 PF00176 SNF2 family N-terminal domain DA68_17205 PF00271 Helicase conserved C-terminal domain DA68_17210 PF11079 Bacterial protein YqhG of unknown function DA68_17230 PF14038 YqzE-like protein DA68_17235 PF01202 Shikimate kinase DA68_17270 PF00482 Type II secretion system (T2SS), protein F DA68_17285 PF11117 Protein of unknown function (DUF2626) DA68_17290 PF00375 Sodium:dicarboxylate symporter family DA68_17325 PF03033 Glycosyltransferase family 28 N-terminal domain DA68_17325 PF04101 Glycosyltransferase family 28 C-terminal domain DA68_17330 PF02310 B12 binding domain DA68_17330 PF02965 Vitamin B12 dependent methionine synthase, activation domain DA68_17330 PF00809 Pterin binding enzyme DA68_17330 PF02574 Homocysteine S-methyltransferase DA68_17330 PF02607 B12 binding domain DA68_17335 PF02219 Methylenetetrahydrofolate reductase DA68_17335 PF02574 Homocysteine S-methyltransferase DA68_17340 PF01053 Cys/Met metabolism PLP-dependent enzyme DA68_17345 PF01053 Cys/Met metabolism PLP-dependent enzyme DA68_17355 PF01022 Bacterial regulatory protein, arsR family DA68_17365 PF00753 Metallo-beta-lactamase superfamily DA68_17370 PF00480 ROK family DA68_17375 PF06014 Bacterial protein of unknown function (DUF910) DA68_17380 PF01812 5-formyltetrahydrofolate cyclo-ligase family DA68_17385 PF00471 Ribosomal protein L33 DA68_17390 PF00483 Nucleotidyl transferase DA68_17395 PF01895 PhoU domain DA68_17400 PF00005 ABC transporter DA68_17405 PF00528 Binding-protein-dependent transport system inner membrane component DA68_17410 PF00528 Binding-protein-dependent transport system inner membrane component DA68_17415 PF12849 PBP superfamily domain DA68_17425 PF07690 Major Facilitator Superfamily DA68_17430 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DA68_17430 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DA68_17440 PF06691 Protein of unknown function (DUF1189) DA68_17450 PF04551 GcpE protein DA68_17455 PF01475 Ferric uptake regulator family DA68_17460 PF00950 ABC 3 transport family DA68_17465 PF00005 ABC transporter DA68_17470 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DA68_17470 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DA68_17475 PF11116 Protein of unknown function (DUF2624) DA68_17480 PF01261 Xylose isomerase-like TIM barrel DA68_17485 PF00271 Helicase conserved C-terminal domain DA68_17485 PF00270 DEAD/DEAH box helicase DA68_17495 PF02401 LytB protein DA68_17500 PF01784 NIF3 (NGG1p interacting factor 3) DA68_17505 PF04816 tRNA (adenine(22)-N(1))-methyltransferase DA68_17510 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DA68_17515 PF04539 Sigma-70 region 3 DA68_17515 PF00140 Sigma-70 factor, region 1.2 DA68_17515 PF04545 Sigma-70, region 4 DA68_17515 PF04542 Sigma-70 region 2 DA68_17515 PF03979 Sigma-70 factor, region 1.1 DA68_17520 PF08275 DNA primase catalytic core, N-terminal domain DA68_17520 PF10410 DnaB-helicase binding domain of primase DA68_17520 PF01807 CHC2 zinc finger DA68_17525 PF03618 Kinase/pyrophosphorylase DA68_17530 PF00571 CBS domain DA68_17530 PF08279 HTH domain DA68_17535 PF11967 Recombination protein O N terminal DA68_17535 PF02565 Recombination protein O C terminal DA68_17545 PF07650 KH domain DA68_17545 PF01926 50S ribosome-binding GTPase DA68_17550 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DA68_17555 PF01219 Prokaryotic diacylglycerol kinase DA68_17560 PF02130 Uncharacterized protein family UPF0054 DA68_17565 PF07698 7TM receptor with intracellular HD hydrolase DA68_17565 PF01966 HD domain DA68_17565 PF07697 7TM-HD extracellular DA68_17570 PF02562 PhoH-like protein DA68_17575 PF06898 Putative stage IV sporulation protein YqfD DA68_17580 PF07873 YabP family DA68_17585 PF09424 Yqey-like protein DA68_17590 PF01165 Ribosomal protein S21 DA68_17595 PF00919 Uncharacterized protein family UPF0004 DA68_17595 PF04055 Radical SAM superfamily DA68_17595 PF01938 TRAM domain DA68_17600 PF04452 RNA methyltransferase DA68_17610 PF00684 DnaJ central domain DA68_17610 PF00226 DnaJ domain DA68_17610 PF01556 DnaJ C terminal domain DA68_17615 PF00012 Hsp70 protein DA68_17620 PF01025 GrpE DA68_17625 PF01628 HrcA protein C terminal domain DA68_17630 PF06969 HemN C-terminal domain DA68_17630 PF04055 Radical SAM superfamily DA68_17635 PF01638 HxlR-like helix-turn-helix DA68_17640 PF00679 Elongation factor G C-terminus DA68_17640 PF00009 Elongation factor Tu GTP binding domain DA68_17640 PF03144 Elongation factor Tu domain 2 DA68_17640 PF06421 GTP-binding protein LepA C-terminus DA68_17650 PF03418 Germination protease DA68_17655 PF01649 Ribosomal protein S20 DA68_17660 PF06144 DNA polymerase III, delta subunit DA68_17665 PF14141 YqzM-like protein DA68_17670 PF03772 Competence protein DA68_17670 PF00753 Metallo-beta-lactamase superfamily DA68_17670 PF13567 Domain of unknown function (DUF4131) DA68_17675 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DA68_17680 PF10531 SLBB domain DA68_17685 PF03807 NADP oxidoreductase coenzyme F420-dependent DA68_17685 PF14748 Pyrroline-5-carboxylate reductase dimerisation DA68_17690 PF13649 Methyltransferase domain DA68_17700 PF01966 HD domain DA68_17705 PF01467 Cytidylyltransferase-like DA68_17710 PF01985 CRS1 / YhbY (CRM) domain DA68_17715 PF01488 Shikimate / quinate 5-dehydrogenase DA68_17715 PF08501 Shikimate dehydrogenase substrate binding domain DA68_17715 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DA68_17720 PF01926 50S ribosome-binding GTPase DA68_17735 PF02666 Phosphatidylserine decarboxylase DA68_17740 PF04542 Sigma-70 region 2 DA68_17740 PF04545 Sigma-70, region 4 DA68_17750 PF16244 Domain of unknown function (DUF4901) DA68_17755 PF00471 Ribosomal protein L33 DA68_17760 PF00881 Nitroreductase family DA68_17765 PF04607 Region found in RelA / SpoT proteins DA68_17775 PF00245 Alkaline phosphatase DA68_17780 PF00583 Acetyltransferase (GNAT) family DA68_17785 PF08386 TAP-like protein DA68_17785 PF00561 alpha/beta hydrolase fold DA68_17825 PF00351 Biopterin-dependent aromatic amino acid hydroxylase DA68_17835 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DA68_17840 PF07681 DoxX DA68_17870 PF00005 ABC transporter DA68_17875 PF01032 FecCD transport family DA68_17880 PF01497 Periplasmic binding protein DA68_17885 PF14143 YrhC-like protein DA68_17890 PF00171 Aldehyde dehydrogenase family DA68_17890 PF00465 Iron-containing alcohol dehydrogenase DA68_17895 PF01053 Cys/Met metabolism PLP-dependent enzyme DA68_17900 PF00291 Pyridoxal-phosphate dependent enzyme DA68_17905 PF01048 Phosphorylase superfamily DA68_17910 PF08241 Methyltransferase domain DA68_17925 PF03717 Penicillin-binding Protein dimerisation domain DA68_17925 PF00905 Penicillin binding protein transpeptidase domain DA68_17935 PF03449 Transcription elongation factor, N-terminal DA68_17935 PF01272 Transcription elongation factor, GreA/GreB, C-term DA68_17940 PF00485 Phosphoribulokinase / Uridine kinase family DA68_17960 PF02618 YceG-like family DA68_17965 PF06949 Protein of unknown function (DUF1292) DA68_17970 PF03652 Holliday junction resolvase DA68_17975 PF06135 IreB regulatory phosphoprotein DA68_17980 PF01411 tRNA synthetases class II (A) DA68_17980 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DA68_17980 PF02272 DHHA1 domain DA68_17990 PF01594 AI-2E family transporter DA68_18010 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain DA68_18010 PF14490 Helix-hairpin-helix containing domain DA68_18010 PF13538 UvrD-like helicase C-terminal domain DA68_18025 PF00266 Aminotransferase class-V DA68_18030 PF02082 Transcriptional regulator DA68_18035 PF05496 Holliday junction DNA helicase RuvB P-loop domain DA68_18035 PF16193 AAA C-terminal domain DA68_18035 PF12002 MgsA AAA+ ATPase C terminal DA68_18045 PF00899 ThiF family DA68_18050 PF01336 OB-fold nucleic acid binding domain DA68_18050 PF00152 tRNA synthetases class II (D, K and N) DA68_18050 PF02938 GAD domain DA68_18055 PF03129 Anticodon binding domain DA68_18055 PF13393 Histidyl-tRNA synthetase DA68_18065 PF02580 D-Tyr-tRNA(Tyr) deacylase DA68_18070 PF02824 TGS domain DA68_18070 PF13291 ACT domain DA68_18070 PF04607 Region found in RelA / SpoT proteins DA68_18075 PF00156 Phosphoribosyl transferase domain DA68_18080 PF01368 DHH family DA68_18080 PF02272 DHHA1 domain DA68_18080 PF17768 RecJ OB domain DA68_18080 PF10141 Single-strand DNA-specific exonuclease, C terminal domain DA68_18085 PF16916 Dimerisation domain of Zinc Transporter DA68_18085 PF01545 Cation efflux family DA68_18090 PF02355 Protein export membrane protein DA68_18090 PF07549 SecD/SecF GG Motif DA68_18095 PF13797 Post-transcriptional regulator DA68_18100 PF01943 Polysaccharide biosynthesis protein DA68_18100 PF14667 Polysaccharide biosynthesis C-terminal domain DA68_18105 PF04239 Protein of unknown function (DUF421) DA68_18115 PF02699 Preprotein translocase subunit DA68_18120 PF01702 Queuine tRNA-ribosyltransferase DA68_18125 PF02547 Queuosine biosynthesis protein DA68_18130 PF11146 Protein of unknown function (DUF2905) DA68_18135 PF05496 Holliday junction DNA helicase RuvB P-loop domain DA68_18135 PF05491 RuvB C-terminal winged helix domain DA68_18135 PF17864 RuvB AAA lid domain DA68_18140 PF07499 RuvA, C-terminal domain DA68_18140 PF01330 RuvA N terminal domain DA68_18145 PF01497 Periplasmic binding protein DA68_18165 PF01476 LysM domain DA68_18170 PF02445 Quinolinate synthetase A protein DA68_18175 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DA68_18175 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DA68_18180 PF02910 Fumarate reductase flavoprotein C-term DA68_18180 PF00890 FAD binding domain DA68_18185 PF00266 Aminotransferase class-V DA68_18190 PF02829 3H domain DA68_18190 PF08279 HTH domain DA68_18195 PF03475 3-alpha domain DA68_18195 PF03473 MOSC domain DA68_18205 PF00800 Prephenate dehydratase DA68_18205 PF01842 ACT domain DA68_18210 PF02687 FtsX-like permease family DA68_18215 PF02687 FtsX-like permease family DA68_18220 PF00005 ABC transporter DA68_18225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_18230 PF00486 Transcriptional regulatory protein, C terminal DA68_18230 PF00072 Response regulator receiver domain DA68_18235 PF01018 GTP1/OBG DA68_18235 PF09269 Domain of unknown function (DUF1967) DA68_18235 PF01926 50S ribosome-binding GTPase DA68_18240 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DA68_18240 PF14682 Sporulation initiation phospho-transferase B, C-terminal DA68_18245 PF01016 Ribosomal L27 protein DA68_18250 PF04327 Cysteine protease Prp DA68_18255 PF00829 Ribosomal prokaryotic L21 protein DA68_18260 PF10150 Ribonuclease E/G family DA68_18260 PF00575 S1 RNA binding domain DA68_18265 PF02163 Peptidase family M50 DA68_18270 PF01551 Peptidase family M23 DA68_18275 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DA68_18280 PF03775 Septum formation inhibitor MinC, C-terminal domain DA68_18290 PF04085 rod shape-determining protein MreC DA68_18300 PF04002 RadC-like JAB domain DA68_18305 PF02545 Maf-like protein DA68_18315 PF02875 Mur ligase family, glutamate ligase domain DA68_18315 PF08245 Mur ligase middle domain DA68_18320 PF08264 Anticodon-binding domain of tRNA DA68_18320 PF10458 Valyl tRNA synthetase tRNA binding arm DA68_18320 PF00133 tRNA synthetases class I (I, L, M and V) DA68_18330 PF01476 LysM domain DA68_18335 PF00202 Aminotransferase class-III DA68_18340 PF00490 Delta-aminolevulinic acid dehydratase DA68_18345 PF02602 Uroporphyrinogen-III synthase HemD DA68_18350 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DA68_18350 PF03900 Porphobilinogen deaminase, C-terminal domain DA68_18355 PF01578 Cytochrome C assembly protein DA68_18360 PF01488 Shikimate / quinate 5-dehydrogenase DA68_18360 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DA68_18360 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DA68_18365 PF01047 MarR family DA68_18370 PF02566 OsmC-like protein DA68_18375 PF01926 50S ribosome-binding GTPase DA68_18380 PF00004 ATPase family associated with various cellular activities (AAA) DA68_18380 PF02190 ATP-dependent protease La (LON) substrate-binding domain DA68_18380 PF05362 Lon protease (S16) C-terminal proteolytic domain DA68_18385 PF05362 Lon protease (S16) C-terminal proteolytic domain DA68_18385 PF00004 ATPase family associated with various cellular activities (AAA) DA68_18390 PF07724 AAA domain (Cdc48 subfamily) DA68_18390 PF06689 ClpX C4-type zinc finger DA68_18390 PF10431 C-terminal, D2-small domain, of ClpB protein DA68_18395 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DA68_18395 PF05698 Bacterial trigger factor protein (TF) C-terminus DA68_18395 PF05697 Bacterial trigger factor protein (TF) DA68_18405 PF11724 YvbH-like oligomerisation region DA68_18405 PF08000 Bacterial PH domain DA68_18425 PF12850 Calcineurin-like phosphoesterase superfamily domain DA68_18430 PF01725 Ham1 family DA68_18435 PF01138 3' exoribonuclease family, domain 1 DA68_18435 PF03725 3' exoribonuclease family, domain 2 DA68_18440 PF10646 Sporulation and spore germination DA68_18445 PF01177 Asp/Glu/Hydantoin racemase DA68_18455 PF00196 Bacterial regulatory proteins, luxR family DA68_18460 PF00860 Permease family DA68_18465 PF07969 Amidohydrolase family DA68_18470 PF04024 PspC domain DA68_18475 PF01381 Helix-turn-helix DA68_18475 PF07883 Cupin domain DA68_18480 PF13536 Putative multidrug resistance efflux transporter DA68_18485 PF00230 Major intrinsic protein DA68_18490 PF02082 Transcriptional regulator DA68_18500 PF13732 Domain of unknown function (DUF4162) DA68_18500 PF00005 ABC transporter DA68_18505 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) DA68_18510 PF00691 OmpA family DA68_18510 PF13677 Membrane MotB of proton-channel complex MotA/MotB DA68_18515 PF01618 MotA/TolQ/ExbB proton channel family DA68_18520 PF02557 D-alanyl-D-alanine carboxypeptidase DA68_18525 PF03061 Thioesterase superfamily DA68_18530 PF13183 4Fe-4S dicluster domain DA68_18530 PF13085 2Fe-2S iron-sulfur cluster binding domain DA68_18535 PF02910 Fumarate reductase flavoprotein C-term DA68_18535 PF00890 FAD binding domain DA68_18540 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DA68_18545 PF10702 Protein of unknown function (DUF2507) DA68_18550 PF08459 UvrC Helix-hairpin-helix N-terminal DA68_18550 PF02151 UvrB/uvrC motif DA68_18550 PF01541 GIY-YIG catalytic domain DA68_18555 PF00085 Thioredoxin DA68_18560 PF00766 Electron transfer flavoprotein FAD-binding domain DA68_18560 PF01012 Electron transfer flavoprotein domain DA68_18565 PF01012 Electron transfer flavoprotein domain DA68_18570 PF00378 Enoyl-CoA hydratase/isomerase DA68_18575 PF00440 Bacterial regulatory proteins, tetR family DA68_18575 PF08359 YsiA-like protein, C-terminal region DA68_18580 PF00501 AMP-binding enzyme DA68_18580 PF13193 AMP-binding enzyme C-terminal domain DA68_18590 PF01497 Periplasmic binding protein DA68_18610 PF05163 DinB family DA68_18635 PF00005 ABC transporter DA68_18640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_18640 PF00512 His Kinase A (phospho-acceptor) domain DA68_18645 PF00072 Response regulator receiver domain DA68_18645 PF00486 Transcriptional regulatory protein, C terminal DA68_18655 PF09962 Uncharacterized conserved protein (DUF2196) DA68_18660 PF10672 S-adenosylmethionine-dependent methyltransferase DA68_18660 PF17785 PUA-like domain DA68_18665 PF03992 Antibiotic biosynthesis monooxygenase DA68_18670 PF04203 Sortase domain DA68_18675 PF00005 ABC transporter DA68_18680 PF01032 FecCD transport family DA68_18685 PF01497 Periplasmic binding protein DA68_18690 PF05031 Iron Transport-associated domain DA68_18700 PF05031 Iron Transport-associated domain DA68_18705 PF05525 Branched-chain amino acid transport protein DA68_18710 PF00849 RNA pseudouridylate synthase DA68_18710 PF01479 S4 domain DA68_18715 PF01713 Smr domain DA68_18715 PF00488 MutS domain V DA68_18720 PF02811 PHP domain DA68_18720 PF14791 DNA polymerase beta thumb DA68_18720 PF14716 Helix-hairpin-helix domain DA68_18725 PF02674 Colicin V production protein DA68_18730 PF05164 Cell division protein ZapA DA68_18735 PF01351 Ribonuclease HII DA68_18735 PF11858 Domain of unknown function (DUF3378) DA68_18755 PF00152 tRNA synthetases class II (D, K and N) DA68_18755 PF01336 OB-fold nucleic acid binding domain DA68_18760 PF03483 B3/4 domain DA68_18760 PF03484 tRNA synthetase B5 domain DA68_18760 PF01588 Putative tRNA binding domain DA68_18760 PF03147 Ferredoxin-fold anticodon binding domain DA68_18760 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DA68_18765 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DA68_18765 PF01409 tRNA synthetases class II core domain (F) DA68_18770 PF08032 RNA 2'-O ribose methyltransferase substrate binding DA68_18770 PF00588 SpoU rRNA Methylase family DA68_18775 PF14098 Small, acid-soluble spore protein I DA68_18780 PF01966 HD domain DA68_18800 PF07690 Major Facilitator Superfamily DA68_18810 PF16859 Tetracyclin repressor-like, C-terminal domain DA68_18810 PF00440 Bacterial regulatory proteins, tetR family DA68_18815 PF05343 M42 glutamyl aminopeptidase DA68_18825 PF00453 Ribosomal protein L20 DA68_18830 PF01632 Ribosomal protein L35 DA68_18835 PF05198 Translation initiation factor IF-3, N-terminal domain DA68_18835 PF00707 Translation initiation factor IF-3, C-terminal domain DA68_18840 PF03129 Anticodon binding domain DA68_18840 PF02824 TGS domain DA68_18840 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DA68_18840 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DA68_18845 PF08812 YtxC-like family DA68_18850 PF13783 Domain of unknown function (DUF4177) DA68_18855 PF07319 Primosomal protein DnaI N-terminus DA68_18855 PF01695 IstB-like ATP binding protein DA68_18860 PF07261 Replication initiation and membrane attachment DA68_18865 PF03477 ATP cone domain DA68_18870 PF02675 S-adenosylmethionine decarboxylase DA68_18875 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DA68_18875 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DA68_18880 PF01121 Dephospho-CoA kinase DA68_18885 PF02659 Putative manganese efflux pump DA68_18890 PF06827 Zinc finger found in FPG and IleRS DA68_18890 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DA68_18890 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DA68_18895 PF00476 DNA polymerase family A DA68_18895 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DA68_18895 PF01367 5'-3' exonuclease, C-terminal SAM fold DA68_18900 PF00512 His Kinase A (phospho-acceptor) domain DA68_18900 PF16736 Single Cache-like DA68_18900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_18900 PF00989 PAS fold DA68_18905 PF00486 Transcriptional regulatory protein, C terminal DA68_18905 PF00072 Response regulator receiver domain DA68_18920 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DA68_18920 PF00056 lactate/malate dehydrogenase, NAD binding domain DA68_18925 PF00180 Isocitrate/isopropylmalate dehydrogenase DA68_18930 PF00285 Citrate synthase, C-terminal domain DA68_18935 PF04284 Protein of unknown function (DUF441) DA68_18940 PF01594 AI-2E family transporter DA68_18945 PF04186 FxsA cytoplasmic membrane protein DA68_18950 PF02887 Pyruvate kinase, alpha/beta domain DA68_18950 PF00224 Pyruvate kinase, barrel domain DA68_18950 PF00391 PEP-utilising enzyme, mobile domain DA68_18955 PF00365 Phosphofructokinase DA68_18960 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DA68_18965 PF17848 Acetyl-coA carboxylase zinc finger domain DA68_18965 PF01039 Carboxyl transferase domain DA68_18970 PF00392 Bacterial regulatory proteins, gntR family DA68_18975 PF00390 Malic enzyme, N-terminal domain DA68_18975 PF03949 Malic enzyme, NAD binding domain DA68_18980 PF01336 OB-fold nucleic acid binding domain DA68_18980 PF07733 Bacterial DNA polymerase III alpha NTPase domain DA68_18980 PF02811 PHP domain DA68_18980 PF14579 Helix-hairpin-helix motif DA68_18980 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DA68_18985 PF14034 Sporulation protein YtrH DA68_18995 PF02272 DHHA1 domain DA68_18995 PF01368 DHH family DA68_19000 PF14007 YtpI-like protein DA68_19010 PF00571 CBS domain DA68_19010 PF03061 Thioesterase superfamily DA68_19010 PF00392 Bacterial regulatory proteins, gntR family DA68_19010 PF07085 DRTGG domain DA68_19025 PF00557 Metallopeptidase family M24 DA68_19025 PF01321 Creatinase/Prolidase N-terminal domain DA68_19055 PF07883 Cupin domain DA68_19065 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DA68_19065 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DA68_19075 PF00582 Universal stress protein family DA68_19090 PF00206 Lyase DA68_19090 PF14698 Argininosuccinate lyase C-terminal DA68_19095 PF00764 Arginosuccinate synthase DA68_19110 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DA68_19110 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DA68_19115 PF12787 EcsC protein family DA68_19130 PF00871 Acetokinase family DA68_19135 PF02384 N-6 DNA Methylase DA68_19140 PF08534 Redoxin DA68_19145 PF09579 Sporulation protein YtfJ (Spore_YtfJ) DA68_19155 PF01513 ATP-NAD kinase DA68_19160 PF07969 Amidohydrolase family DA68_19170 PF13193 AMP-binding enzyme C-terminal domain DA68_19170 PF00501 AMP-binding enzyme DA68_19175 PF00269 Small, acid-soluble spore proteins, alpha/beta type DA68_19180 PF02568 Thiamine biosynthesis protein (ThiI) DA68_19180 PF02926 THUMP domain DA68_19185 PF00266 Aminotransferase class-V DA68_19190 PF06160 Septation ring formation regulator, EzrA DA68_19195 PF03466 LysR substrate binding domain DA68_19195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA68_19200 PF00892 EamA-like transporter family DA68_19205 PF00440 Bacterial regulatory proteins, tetR family DA68_19210 PF13185 GAF domain DA68_19215 PF01053 Cys/Met metabolism PLP-dependent enzyme DA68_19220 PF01479 S4 domain DA68_19220 PF00163 Ribosomal protein S4/S9 N-terminal domain DA68_19250 PF00579 tRNA synthetases class I (W and Y) DA68_19250 PF01479 S4 domain DA68_19260 PF04542 Sigma-70 region 2 DA68_19260 PF08281 Sigma-70, region 4 DA68_19270 PF14602 Hexapeptide repeat of succinyl-transferase DA68_19270 PF12464 Maltose acetyltransferase DA68_19275 PF13193 AMP-binding enzyme C-terminal domain DA68_19275 PF00501 AMP-binding enzyme DA68_19280 PF00583 Acetyltransferase (GNAT) family DA68_19285 PF00571 CBS domain DA68_19290 PF00850 Histone deacetylase domain DA68_19305 PF00486 Transcriptional regulatory protein, C terminal DA68_19305 PF00072 Response regulator receiver domain DA68_19310 PF00512 His Kinase A (phospho-acceptor) domain DA68_19310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_19310 PF00989 PAS fold DA68_19310 PF16736 Single Cache-like DA68_19315 PF12796 Ankyrin repeats (3 copies) DA68_19320 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DA68_19325 PF01741 Large-conductance mechanosensitive channel, MscL DA68_19350 PF00356 Bacterial regulatory proteins, lacI family DA68_19355 PF00793 DAHP synthetase I family DA68_19355 PF01817 Chorismate mutase type II DA68_19360 PF07537 CamS sex pheromone cAM373 precursor DA68_19365 PF11009 Protein of unknown function (DUF2847) DA68_19375 PF02073 Thermophilic metalloprotease (M29) DA68_19390 PF13302 Acetyltransferase (GNAT) domain DA68_19395 PF01225 Mur ligase family, catalytic domain DA68_19395 PF02875 Mur ligase family, glutamate ligase domain DA68_19395 PF08245 Mur ligase middle domain DA68_19405 PF09397 Ftsk gamma domain DA68_19405 PF17854 FtsK alpha domain DA68_19405 PF01580 FtsK/SpoIIIE family DA68_19410 PF01520 N-acetylmuramoyl-L-alanine amidase DA68_19410 PF01476 LysM domain DA68_19420 PF14794 Domain of unknown function (DUF4479) DA68_19420 PF01588 Putative tRNA binding domain DA68_19425 PF07285 Protein of unknown function (DUF1444) DA68_19430 PF00085 Thioredoxin DA68_19435 PF01931 Protein of unknown function DUF84 DA68_19440 PF05343 M42 glutamyl aminopeptidase DA68_19450 PF00753 Metallo-beta-lactamase superfamily DA68_19455 PF02390 Putative methyltransferase DA68_19460 PF14165 YtzH-like protein DA68_19465 PF01636 Phosphotransferase enzyme family DA68_19470 PF17999 Pullulanase N1-terminal domain DA68_19470 PF00128 Alpha amylase, catalytic domain DA68_19470 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DA68_19475 PF02834 LigT like Phosphoesterase DA68_19480 PF01546 Peptidase family M20/M25/M40 DA68_19485 PF08220 DeoR-like helix-turn-helix domain DA68_19490 PF00849 RNA pseudouridylate synthase DA68_19490 PF01479 S4 domain DA68_19495 PF14667 Polysaccharide biosynthesis C-terminal domain DA68_19495 PF01943 Polysaccharide biosynthesis protein DA68_19505 PF07690 Major Facilitator Superfamily DA68_19510 PF01022 Bacterial regulatory protein, arsR family DA68_19515 PF08327 Activator of Hsp90 ATPase homolog 1-like protein DA68_19525 PF10957 Sporulation protein Cse60 DA68_19535 PF02559 CarD-like/TRCF domain DA68_19545 PF06800 Sugar transport protein DA68_19560 PF02391 MoaE protein DA68_19565 PF03205 Molybdopterin guanine dinucleotide synthesis protein B DA68_19570 PF03454 MoeA C-terminal region (domain IV) DA68_19570 PF00994 Probable molybdopterin binding domain DA68_19570 PF03453 MoeA N-terminal region (domain I and II) DA68_19575 PF01967 MoaC family DA68_19580 PF00899 ThiF family DA68_19585 PF04055 Radical SAM superfamily DA68_19585 PF06463 Molybdenum Cofactor Synthesis C DA68_19605 PF00581 Rhodanese-like domain DA68_19615 PF00561 alpha/beta hydrolase fold DA68_19620 PF03323 Bacillus/Clostridium GerA spore germination protein DA68_19625 PF03845 Spore germination protein DA68_19655 PF13603 Leucyl-tRNA synthetase, Domain 2 DA68_19655 PF09334 tRNA synthetases class I (M) DA68_19655 PF00133 tRNA synthetases class I (I, L, M and V) DA68_19655 PF08264 Anticodon-binding domain of tRNA DA68_19660 PF07690 Major Facilitator Superfamily DA68_19665 PF00999 Sodium/hydrogen exchanger family DA68_19670 PF02080 TrkA-C domain DA68_19675 PF00589 Phage integrase family DA68_19685 PF00005 ABC transporter DA68_19690 PF07786 Protein of unknown function (DUF1624) DA68_19690 PF04235 Protein of unknown function (DUF418) DA68_19700 PF10732 Protein of unknown function (DUF2524) DA68_19705 PF04055 Radical SAM superfamily DA68_19705 PF16199 Radical_SAM C-terminal domain DA68_19710 PF06962 Putative rRNA methylase DA68_19715 PF00005 ABC transporter DA68_19725 PF01177 Asp/Glu/Hydantoin racemase DA68_19735 PF10776 Protein of unknown function (DUF2600) DA68_19740 PF12146 Serine aminopeptidase, S33 DA68_19745 PF00132 Bacterial transferase hexapeptide (six repeats) DA68_19750 PF01569 PAP2 superfamily DA68_19755 PF13439 Glycosyltransferase Family 4 DA68_19755 PF00534 Glycosyl transferases group 1 DA68_19760 PF12804 MobA-like NTP transferase domain DA68_19765 PF00994 Probable molybdopterin binding domain DA68_19780 PF13302 Acetyltransferase (GNAT) domain DA68_19785 PF02773 S-adenosylmethionine synthetase, C-terminal domain DA68_19785 PF02772 S-adenosylmethionine synthetase, central domain DA68_19785 PF00438 S-adenosylmethionine synthetase, N-terminal domain DA68_19790 PF01293 Phosphoenolpyruvate carboxykinase DA68_19820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_19820 PF00512 His Kinase A (phospho-acceptor) domain DA68_19820 PF13188 PAS domain DA68_19820 PF13426 PAS domain DA68_19820 PF00989 PAS fold DA68_19825 PF02743 Cache domain DA68_19825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_19825 PF00512 His Kinase A (phospho-acceptor) domain DA68_19830 PF08386 TAP-like protein DA68_19830 PF00561 alpha/beta hydrolase fold DA68_19835 PF00884 Sulfatase DA68_19855 PF00005 ABC transporter DA68_19860 PF00528 Binding-protein-dependent transport system inner membrane component DA68_19875 PF13419 Haloacid dehalogenase-like hydrolase DA68_19880 PF00293 NUDIX domain DA68_19910 PF02664 S-Ribosylhomocysteinase (LuxS) DA68_19915 PF01809 Putative membrane protein insertion efficiency factor DA68_19920 PF00484 Carbonic anhydrase DA68_19925 PF01654 Cytochrome bd terminal oxidase subunit I DA68_19930 PF02322 Cytochrome bd terminal oxidase subunit II DA68_19935 PF10676 Spore germination protein gerPA/gerPF DA68_19945 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DA68_19945 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DA68_19965 PF04012 PspA/IM30 family DA68_19980 PF02421 Ferrous iron transport protein B DA68_19980 PF17910 FeoB cytosolic helical domain DA68_19980 PF07664 Ferrous iron transport protein B C terminus DA68_19980 PF07670 Nucleoside recognition DA68_19990 PF09515 Thiamine transporter protein (Thia_YuaJ) DA68_19995 PF00672 HAMP domain DA68_19995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_19995 PF00512 His Kinase A (phospho-acceptor) domain DA68_20000 PF00072 Response regulator receiver domain DA68_20000 PF00486 Transcriptional regulatory protein, C terminal DA68_20030 PF00781 Diacylglycerol kinase catalytic domain DA68_20070 PF02687 FtsX-like permease family DA68_20075 PF00005 ABC transporter DA68_20090 PF09335 SNARE associated Golgi protein DA68_20095 PF00398 Ribosomal RNA adenine dimethylase DA68_20100 PF02687 FtsX-like permease family DA68_20105 PF00005 ABC transporter DA68_20110 PF06445 GyrI-like small molecule binding domain DA68_20110 PF12833 Helix-turn-helix domain DA68_20120 PF00005 ABC transporter DA68_20125 PF13630 SdpI/YhfL protein family DA68_20125 PF07853 Protein of unknown function (DUF1648) DA68_20130 PF01022 Bacterial regulatory protein, arsR family DA68_20135 PF00486 Transcriptional regulatory protein, C terminal DA68_20135 PF00072 Response regulator receiver domain DA68_20140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_20145 PF02687 FtsX-like permease family DA68_20150 PF02687 FtsX-like permease family DA68_20155 PF00005 ABC transporter DA68_20160 PF02687 FtsX-like permease family DA68_20170 PF02447 GntP family permease DA68_20185 PF07071 KDGP aldolase DA68_20190 PF03841 L-seryl-tRNA selenium transferase DA68_20195 PF01979 Amidohydrolase family DA68_20200 PF02557 D-alanyl-D-alanine carboxypeptidase DA68_20205 PF00512 His Kinase A (phospho-acceptor) domain DA68_20205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_20210 PF00486 Transcriptional regulatory protein, C terminal DA68_20210 PF00072 Response regulator receiver domain DA68_20215 PF13378 Enolase C-terminal domain-like DA68_20215 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DA68_20220 PF00501 AMP-binding enzyme DA68_20220 PF13193 AMP-binding enzyme C-terminal domain DA68_20225 PF00378 Enoyl-CoA hydratase/isomerase DA68_20230 PF12697 Alpha/beta hydrolase family DA68_20235 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DA68_20235 PF16582 Middle domain of thiamine pyrophosphate DA68_20235 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DA68_20240 PF00425 chorismate binding enzyme DA68_20245 PF01040 UbiA prenyltransferase family DA68_20250 PF01258 Prokaryotic dksA/traR C4-type zinc finger DA68_20255 PF00313 'Cold-shock' DNA-binding domain DA68_20275 PF00343 Carbohydrate phosphorylase DA68_20280 PF00534 Glycosyl transferases group 1 DA68_20280 PF08323 Starch synthase catalytic domain DA68_20285 PF00483 Nucleotidyl transferase DA68_20290 PF00483 Nucleotidyl transferase DA68_20295 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DA68_20295 PF00128 Alpha amylase, catalytic domain DA68_20295 PF02806 Alpha amylase, C-terminal all-beta domain DA68_20305 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DA68_20305 PF00056 lactate/malate dehydrogenase, NAD binding domain DA68_20400 PF05697 Bacterial trigger factor protein (TF) DA68_20400 PF05698 Bacterial trigger factor protein (TF) C-terminus DA68_20435 PF02308 MgtC family DA68_20440 PF02254 TrkA-N domain DA68_20440 PF07885 Ion channel DA68_20445 PF08868 YugN-like family DA68_20450 PF00342 Phosphoglucose isomerase DA68_20455 PF04070 Domain of unknown function (DUF378) DA68_20460 PF00575 S1 RNA binding domain DA68_20465 PF00155 Aminotransferase class I and II DA68_20470 PF01037 Lrp/AsnC ligand binding domain DA68_20475 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DA68_20475 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DA68_20480 PF00561 alpha/beta hydrolase fold DA68_20480 PF08386 TAP-like protein DA68_20490 PF00155 Aminotransferase class I and II DA68_20505 PF08810 Kinase associated protein B DA68_20510 PF00929 Exonuclease DA68_20515 PF03600 Citrate transporter DA68_20530 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DA68_20530 PF03129 Anticodon binding domain DA68_20535 PF03061 Thioesterase superfamily DA68_20545 PF02632 BioY family DA68_20550 PF00483 Nucleotidyl transferase DA68_20555 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DA68_20555 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DA68_20555 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DA68_20555 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DA68_20560 PF02457 DisA bacterial checkpoint controller nucleotide-binding DA68_20560 PF10372 Bacterial membrane-spanning protein N-terminus DA68_20575 PF00892 EamA-like transporter family DA68_20580 PF01040 UbiA prenyltransferase family DA68_20590 PF02789 Cytosol aminopeptidase family, N-terminal domain DA68_20590 PF00883 Cytosol aminopeptidase family, catalytic domain DA68_20605 PF00892 EamA-like transporter family DA68_20610 PF01040 UbiA prenyltransferase family DA68_20615 PF06725 3D domain DA68_20625 PF13344 Haloacid dehalogenase-like hydrolase DA68_20625 PF00293 NUDIX domain DA68_20630 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA68_20635 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA68_20645 PF06445 GyrI-like small molecule binding domain DA68_20660 PF04463 Protein of unknown function (DUF523) DA68_20670 PF01521 Iron-sulphur cluster biosynthesis DA68_20675 PF01678 Diaminopimelate epimerase DA68_20680 PF07293 Protein of unknown function (DUF1450) DA68_20685 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA68_20695 PF03412 Peptidase C39 family DA68_20695 PF00005 ABC transporter DA68_20695 PF00664 ABC transporter transmembrane region DA68_20700 PF03649 Uncharacterised protein family (UPF0014) DA68_20705 PF03831 PhnA domain DA68_20705 PF08274 PhnA Zinc-Ribbon DA68_20750 PF07315 Protein of unknown function (DUF1462) DA68_20755 PF01106 NifU-like domain DA68_20770 PF04608 Phosphatidylglycerophosphatase A DA68_20790 PF11202 Phosphoribosyl transferase (PRTase) DA68_20790 PF15608 PELOTA RNA binding domain DA68_20805 PF00005 ABC transporter DA68_20805 PF02687 FtsX-like permease family DA68_20805 PF12704 MacB-like periplasmic core domain DA68_20810 PF02525 Flavodoxin-like fold DA68_20815 PF13344 Haloacid dehalogenase-like hydrolase DA68_20825 PF01934 Protein of unknown function DUF86 DA68_20830 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DA68_20845 PF06265 Protein of unknown function (DUF1027) DA68_20850 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) DA68_20855 PF13411 MerR HTH family regulatory protein DA68_20855 PF07739 TipAS antibiotic-recognition domain DA68_20860 PF10086 YhfC intramembrane metalloprotease DA68_20880 PF04055 Radical SAM superfamily DA68_20880 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DA68_20885 PF01551 Peptidase family M23 DA68_20890 PF09560 Sporulation protein YunB (Spo_YunB) DA68_20895 PF08827 Domain of unknown function (DUF1805) DA68_20900 PF02872 5'-nucleotidase, C-terminal domain DA68_20910 PF01458 Uncharacterized protein family (UPF0051) DA68_20915 PF01592 NifU-like N terminal domain DA68_20920 PF00266 Aminotransferase class-V DA68_20925 PF01458 Uncharacterized protein family (UPF0051) DA68_20930 PF00005 ABC transporter DA68_20935 PF03180 NLPA lipoprotein DA68_20940 PF00528 Binding-protein-dependent transport system inner membrane component DA68_20945 PF09383 NIL domain DA68_20945 PF00005 ABC transporter DA68_20955 PF00085 Thioredoxin DA68_20960 PF01751 Toprim domain DA68_20965 PF01597 Glycine cleavage H-protein DA68_20970 PF03960 ArsC family DA68_20990 PF00056 lactate/malate dehydrogenase, NAD binding domain DA68_20990 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DA68_21005 PF13305 Tetracyclin repressor-like, C-terminal domain DA68_21005 PF00440 Bacterial regulatory proteins, tetR family DA68_21010 PF00753 Metallo-beta-lactamase superfamily DA68_21015 PF02770 Acyl-CoA dehydrogenase, middle domain DA68_21015 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DA68_21015 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DA68_21020 PF00108 Thiolase, N-terminal domain DA68_21020 PF02803 Thiolase, C-terminal domain DA68_21025 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DA68_21025 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DA68_21025 PF00378 Enoyl-CoA hydratase/isomerase DA68_21030 PF14115 YuzL-like protein DA68_21035 PF00768 D-alanyl-D-alanine carboxypeptidase DA68_21035 PF07943 Penicillin-binding protein 5, C-terminal domain DA68_21040 PF01619 Proline dehydrogenase DA68_21045 PF10835 Protein of unknown function (DUF2573) DA68_21050 PF01910 Thiamine-binding protein DA68_21055 PF00672 HAMP domain DA68_21055 PF02743 Cache domain DA68_21055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA68_21070 PF07690 Major Facilitator Superfamily DA68_21075 PF13520 Amino acid permease DA68_21090 PF02096 60Kd inner membrane protein DA68_21100 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DA68_21100 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DA68_21130 PF09335 SNARE associated Golgi protein DA68_21140 PF03734 L,D-transpeptidase catalytic domain DA68_21140 PF17969 L,D-transpeptidase C-terminal domain DA68_21145 PF00072 Response regulator receiver domain DA68_21145 PF00486 Transcriptional regulatory protein, C terminal DA68_21150 PF00512 His Kinase A (phospho-acceptor) domain DA68_21150 PF00989 PAS fold DA68_21150 PF16736 Single Cache-like DA68_21150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_21165 PF09334 tRNA synthetases class I (M) DA68_21165 PF08264 Anticodon-binding domain of tRNA DA68_21175 PF02743 Cache domain DA68_21175 PF00672 HAMP domain DA68_21175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA68_21180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA68_21180 PF00672 HAMP domain DA68_21180 PF02743 Cache domain DA68_21185 PF01883 Iron-sulfur cluster assembly protein DA68_21190 PF02868 Thermolysin metallopeptidase, alpha-helical domain DA68_21190 PF01447 Thermolysin metallopeptidase, catalytic domain DA68_21190 PF03413 Peptidase propeptide and YPEB domain DA68_21190 PF07504 Fungalysin/Thermolysin Propeptide Motif DA68_21195 PF17954 Quercetinase C-terminal cupin domain DA68_21195 PF02678 Pirin DA68_21200 PF01047 MarR family DA68_21210 PF09335 SNARE associated Golgi protein DA68_21215 PF00999 Sodium/hydrogen exchanger family DA68_21220 PF02080 TrkA-C domain DA68_21225 PF01235 Sodium:alanine symporter family DA68_21230 PF00210 Ferritin-like domain DA68_21245 PF03641 Possible lysine decarboxylase DA68_21255 PF00210 Ferritin-like domain DA68_21260 PF04235 Protein of unknown function (DUF418) DA68_21265 PF07662 Na+ dependent nucleoside transporter C-terminus DA68_21265 PF01773 Na+ dependent nucleoside transporter N-terminus DA68_21270 PF01773 Na+ dependent nucleoside transporter N-terminus DA68_21270 PF07662 Na+ dependent nucleoside transporter C-terminus DA68_21275 PF01235 Sodium:alanine symporter family DA68_21280 PF01235 Sodium:alanine symporter family DA68_21285 PF13460 NAD(P)H-binding DA68_21300 PF00248 Aldo/keto reductase family DA68_21305 PF07690 Major Facilitator Superfamily DA68_21310 PF01638 HxlR-like helix-turn-helix DA68_21315 PF07849 Protein of unknown function (DUF1641) DA68_21320 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA68_21325 PF01479 S4 domain DA68_21325 PF00579 tRNA synthetases class I (W and Y) DA68_21330 PF01565 FAD binding domain DA68_21330 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DA68_21340 PF17202 Single cache domain 3 DA68_21340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA68_21340 PF00672 HAMP domain DA68_21350 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DA68_21355 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DA68_21370 PF07690 Major Facilitator Superfamily DA68_21375 PF12848 ABC transporter DA68_21375 PF00005 ABC transporter DA68_21380 PF13302 Acetyltransferase (GNAT) domain DA68_21385 PF06146 Phosphate-starvation-inducible E DA68_21400 PF17440 Thiol-activated cytolysin beta sandwich domain DA68_21400 PF01289 Thiol-activated cytolysin DA68_21410 PF00005 ABC transporter DA68_21415 PF01032 FecCD transport family DA68_21420 PF01032 FecCD transport family DA68_21430 PF00072 Response regulator receiver domain DA68_21430 PF00486 Transcriptional regulatory protein, C terminal DA68_21445 PF09299 Mu transposase, C-terminal DA68_21445 PF00665 Integrase core domain DA68_21465 PF02384 N-6 DNA Methylase DA68_21465 PF12161 HsdM N-terminal domain DA68_21475 PF12008 Type I restriction and modification enzyme - subunit R C terminal DA68_21475 PF18766 SWI2/SNF2 ATPase DA68_21475 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DA68_21495 PF01668 SmpB protein DA68_21505 PF00773 RNB domain DA68_21505 PF08206 Ribonuclease B OB domain DA68_21505 PF00575 S1 RNA binding domain DA68_21505 PF17876 Cold shock domain DA68_21510 PF12146 Serine aminopeptidase, S33 DA68_21515 PF03840 Preprotein translocase SecG subunit DA68_21520 PF04172 LrgB-like family DA68_21525 PF03788 LrgA family DA68_21530 PF01156 Inosine-uridine preferring nucleoside hydrolase DA68_21535 PF00113 Enolase, C-terminal TIM barrel domain DA68_21535 PF03952 Enolase, N-terminal domain DA68_21540 PF01676 Metalloenzyme superfamily DA68_21540 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DA68_21545 PF00121 Triosephosphate isomerase DA68_21550 PF00162 Phosphoglycerate kinase DA68_21555 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DA68_21555 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DA68_21560 PF04198 Putative sugar-binding domain DA68_21570 PF04552 Sigma-54, DNA binding domain DA68_21570 PF04963 Sigma-54 factor, core binding domain DA68_21570 PF00309 Sigma-54 factor, Activator interacting domain (AID) DA68_21585 PF00005 ABC transporter DA68_21585 PF13732 Domain of unknown function (DUF4162) DA68_21590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_21590 PF07730 Histidine kinase DA68_21595 PF00196 Bacterial regulatory proteins, luxR family DA68_21595 PF00072 Response regulator receiver domain DA68_21615 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DA68_21620 PF07451 Stage V sporulation protein AD (SpoVAD) DA68_21625 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DA68_21635 PF04239 Protein of unknown function (DUF421) DA68_21640 PF00574 Clp protease DA68_21650 PF00381 PTS HPr component phosphorylation site DA68_21655 PF14527 WhiA LAGLIDADG-like domain DA68_21655 PF02650 WhiA C-terminal HTH domain DA68_21655 PF10298 WhiA N-terminal LAGLIDADG-like domain DA68_21660 PF01933 Uncharacterised protein family UPF0052 DA68_21665 PF03668 P-loop ATPase protein family DA68_21670 PF00293 NUDIX domain DA68_21680 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA68_21690 PF14602 Hexapeptide repeat of succinyl-transferase DA68_21695 PF13419 Haloacid dehalogenase-like hydrolase DA68_21700 PF01790 Prolipoprotein diacylglyceryl transferase DA68_21705 PF07475 HPr Serine kinase C-terminal domain DA68_21705 PF02603 HPr Serine kinase N terminus DA68_21710 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV DA68_21720 PF17755 UvrA DNA-binding domain DA68_21720 PF17760 UvrA interaction domain DA68_21720 PF00005 ABC transporter DA68_21725 PF00271 Helicase conserved C-terminal domain DA68_21725 PF04851 Type III restriction enzyme, res subunit DA68_21725 PF02151 UvrB/uvrC motif DA68_21725 PF12344 Ultra-violet resistance protein B DA68_21725 PF17757 UvrB interaction domain DA68_21740 PF13411 MerR HTH family regulatory protein DA68_21740 PF07739 TipAS antibiotic-recognition domain DA68_21755 PF03601 Conserved hypothetical protein 698 DA68_21760 PF03466 LysR substrate binding domain DA68_21760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA68_21765 PF00376 MerR family regulatory protein DA68_21765 PF09278 MerR, DNA binding DA68_21770 PF03358 NADPH-dependent FMN reductase DA68_21780 PF01906 Putative heavy-metal-binding DA68_21785 PF00664 ABC transporter transmembrane region DA68_21785 PF00005 ABC transporter DA68_21790 PF17820 PDZ domain DA68_21795 PF03572 Peptidase family S41 DA68_21795 PF17820 PDZ domain DA68_21795 PF01471 Putative peptidoglycan binding domain DA68_21800 PF02687 FtsX-like permease family DA68_21800 PF18075 FtsX extracellular domain DA68_21805 PF00005 ABC transporter DA68_21810 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DA68_21815 PF03462 PCRF domain DA68_21815 PF00472 RF-1 domain DA68_21820 PF02810 SEC-C motif DA68_21820 PF07517 SecA DEAD-like domain DA68_21820 PF07516 SecA Wing and Scaffold domain DA68_21820 PF01043 SecA preprotein cross-linking domain DA68_21830 PF00005 ABC transporter DA68_21860 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DA68_21860 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus DA68_21865 PF00313 'Cold-shock' DNA-binding domain DA68_21875 PF00271 Helicase conserved C-terminal domain DA68_21875 PF04851 Type III restriction enzyme, res subunit DA68_21880 PF00877 NlpC/P60 family DA68_21880 PF01476 LysM domain DA68_21885 PF01638 HxlR-like helix-turn-helix DA68_21890 PF02645 Uncharacterised protein, DegV family COG1307 DA68_21895 PF01205 Uncharacterized protein family UPF0029 DA68_21895 PF09186 Domain of unknown function (DUF1949) DA68_21900 PF03816 Cell envelope-related transcriptional attenuator domain DA68_21905 PF02350 UDP-N-acetylglucosamine 2-epimerase DA68_21910 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DA68_21910 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DA68_21910 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DA68_21915 PF00953 Glycosyl transferase family 4 DA68_21925 PF00158 Sigma-54 interaction domain DA68_21925 PF00874 PRD domain DA68_21925 PF03610 PTS system fructose IIA component DA68_21935 PF02417 Chromate transporter DA68_21940 PF04794 YdjC-like protein DA68_21945 PF02056 Family 4 glycosyl hydrolase DA68_21945 PF11975 Family 4 glycosyl hydrolase C-terminal domain DA68_21950 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DA68_21955 PF02378 Phosphotransferase system, EIIC DA68_21960 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DA68_21965 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DA68_21970 PF02378 Phosphotransferase system, EIIC DA68_21975 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DA68_21980 PF00375 Sodium:dicarboxylate symporter family DA68_22000 PF03466 LysR substrate binding domain DA68_22000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA68_22015 PF01654 Cytochrome bd terminal oxidase subunit I DA68_22020 PF02322 Cytochrome bd terminal oxidase subunit II DA68_22025 PF02040 Arsenical pump membrane protein DA68_22030 PF01964 Radical SAM ThiC family DA68_22030 PF13667 ThiC-associated domain DA68_22035 PF02652 L-lactate permease DA68_22045 PF09988 Uncharacterized metal-binding protein (DUF2227) DA68_22055 PF00884 Sulfatase DA68_22060 PF01063 Amino-transferase class IV DA68_22065 PF00877 NlpC/P60 family DA68_22065 PF01476 LysM domain DA68_22070 PF01773 Na+ dependent nucleoside transporter N-terminus DA68_22070 PF07662 Na+ dependent nucleoside transporter C-terminus DA68_22090 PF02028 BCCT, betaine/carnitine/choline family transporter DA68_22095 PF06725 3D domain DA68_22095 PF01476 LysM domain DA68_22120 PF04434 SWIM zinc finger DA68_22125 PF00271 Helicase conserved C-terminal domain DA68_22125 PF12419 SNF2 Helicase protein DA68_22125 PF00176 SNF2 family N-terminal domain DA68_22155 PF04542 Sigma-70 region 2 DA68_22155 PF04545 Sigma-70, region 4 DA68_22160 PF04893 Yip1 domain DA68_22165 PF02687 FtsX-like permease family DA68_22165 PF12704 MacB-like periplasmic core domain DA68_22170 PF00005 ABC transporter DA68_22180 PF07690 Major Facilitator Superfamily DA68_22195 PF00512 His Kinase A (phospho-acceptor) domain DA68_22195 PF00989 PAS fold DA68_22195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_22195 PF16736 Single Cache-like DA68_22200 PF00486 Transcriptional regulatory protein, C terminal DA68_22200 PF00072 Response regulator receiver domain DA68_22205 PF16363 GDP-mannose 4,6 dehydratase DA68_22220 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DA68_22220 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DA68_22220 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DA68_22235 PF00534 Glycosyl transferases group 1 DA68_22235 PF13439 Glycosyltransferase Family 4 DA68_22250 PF00534 Glycosyl transferases group 1 DA68_22255 PF02350 UDP-N-acetylglucosamine 2-epimerase DA68_22260 PF01370 NAD dependent epimerase/dehydratase family DA68_22265 PF08485 Polysaccharide biosynthesis protein C-terminal DA68_22265 PF02719 Polysaccharide biosynthesis protein DA68_22270 PF13579 Glycosyl transferase 4-like domain DA68_22275 PF16363 GDP-mannose 4,6 dehydratase DA68_22280 PF02397 Bacterial sugar transferase DA68_22285 PF02719 Polysaccharide biosynthesis protein DA68_22290 PF00483 Nucleotidyl transferase DA68_22300 PF13614 AAA domain DA68_22305 PF13807 G-rich domain on putative tyrosine kinase DA68_22305 PF02706 Chain length determinant protein DA68_22310 PF13614 AAA domain DA68_22315 PF07977 FabA-like domain DA68_22325 PF12116 Stage III sporulation protein D DA68_22335 PF01551 Peptidase family M23 DA68_22345 PF00005 ABC transporter DA68_22350 PF04397 LytTr DNA-binding domain DA68_22350 PF00072 Response regulator receiver domain DA68_22355 PF08486 Stage II sporulation protein DA68_22360 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DA68_22370 PF06612 Protein of unknown function (DUF1146) DA68_22375 PF00361 Proton-conducting membrane transporter DA68_22380 PF00361 Proton-conducting membrane transporter DA68_22385 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DA68_22385 PF00361 Proton-conducting membrane transporter DA68_22385 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus DA68_22390 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DA68_22395 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DA68_22405 PF00146 NADH dehydrogenase DA68_22410 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DA68_22415 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DA68_22420 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DA68_22425 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DA68_22430 PF03707 Bacterial signalling protein N terminal repeat DA68_22430 PF00563 EAL domain DA68_22430 PF00990 Diguanylate cyclase, GGDEF domain DA68_22445 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DA68_22445 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DA68_22450 PF02874 ATP synthase alpha/beta family, beta-barrel domain DA68_22450 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DA68_22455 PF00231 ATP synthase DA68_22460 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DA68_22460 PF00306 ATP synthase alpha/beta chain, C terminal domain DA68_22460 PF02874 ATP synthase alpha/beta family, beta-barrel domain DA68_22465 PF00213 ATP synthase delta (OSCP) subunit DA68_22470 PF00430 ATP synthase B/B' CF(0) DA68_22475 PF00137 ATP synthase subunit C DA68_22480 PF00119 ATP synthase A chain DA68_22485 PF03899 ATP synthase I chain DA68_22500 PF00464 Serine hydroxymethyltransferase DA68_22505 PF04260 Protein of unknown function (DUF436) DA68_22510 PF02502 Ribose/Galactose Isomerase DA68_22515 PF01451 Low molecular weight phosphotyrosine protein phosphatase DA68_22520 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DA68_22525 PF07681 DoxX DA68_22530 PF01613 Flavin reductase like domain DA68_22545 PF02659 Putative manganese efflux pump DA68_22550 PF01300 Telomere recombination DA68_22550 PF03481 Putative GTP-binding controlling metal-binding DA68_22560 PF09551 Stage II sporulation protein R (spore_II_R) DA68_22565 PF17827 PrmC N-terminal domain DA68_22565 PF13847 Methyltransferase domain DA68_22570 PF00472 RF-1 domain DA68_22570 PF03462 PCRF domain DA68_22575 PF00265 Thymidine kinase DA68_22580 PF01197 Ribosomal protein L31 DA68_22585 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DA68_22585 PF07498 Rho termination factor, N-terminal domain DA68_22585 PF07497 Rho termination factor, RNA-binding domain DA68_22590 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DA68_22595 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DA68_22600 PF01116 Fructose-bisphosphate aldolase class-II DA68_22605 PF00072 Response regulator receiver domain DA68_22610 PF10740 Domain of unknown function (DUF2529) DA68_22615 PF06418 CTP synthase N-terminus DA68_22615 PF00117 Glutamine amidotransferase class-I DA68_22620 PF05066 HB1, ASXL, restriction endonuclease HTH domain DA68_22630 PF02770 Acyl-CoA dehydrogenase, middle domain DA68_22630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DA68_22630 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DA68_22635 PF02770 Acyl-CoA dehydrogenase, middle domain DA68_22635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DA68_22635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DA68_22640 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DA68_22640 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DA68_22645 PF02803 Thiolase, C-terminal domain DA68_22645 PF00108 Thiolase, N-terminal domain DA68_22650 PF13183 4Fe-4S dicluster domain DA68_22650 PF02754 Cysteine-rich domain DA68_22655 PF13091 PLD-like domain DA68_22660 PF03851 UV-endonuclease UvdE DA68_22665 PF03707 Bacterial signalling protein N terminal repeat DA68_22665 PF00990 Diguanylate cyclase, GGDEF domain DA68_22665 PF00563 EAL domain DA68_22680 PF02868 Thermolysin metallopeptidase, alpha-helical domain DA68_22680 PF01447 Thermolysin metallopeptidase, catalytic domain DA68_22680 PF03413 Peptidase propeptide and YPEB domain DA68_22680 PF07504 Fungalysin/Thermolysin Propeptide Motif DA68_22685 PF00196 Bacterial regulatory proteins, luxR family DA68_22685 PF00072 Response regulator receiver domain DA68_22690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_22690 PF07730 Histidine kinase DA68_22700 PF00005 ABC transporter DA68_22705 PF00557 Metallopeptidase family M24 DA68_22715 PF04389 Peptidase family M28 DA68_22715 PF02225 PA domain DA68_22735 PF08281 Sigma-70, region 4 DA68_22735 PF04542 Sigma-70 region 2 DA68_22740 PF05746 DALR anticodon binding domain DA68_22740 PF00750 tRNA synthetases class I (R) DA68_22740 PF03485 Arginyl tRNA synthetase N terminal domain DA68_22745 PF09148 Domain of unknown function (DUF1934) DA68_22750 PF17676 LD-carboxypeptidase C-terminal domain DA68_22750 PF02016 LD-carboxypeptidase N-terminal domain DA68_22765 PF00491 Arginase family DA68_22770 PF17284 Spermidine synthase tetramerisation domain DA68_22775 PF07690 Major Facilitator Superfamily DA68_22780 PF13411 MerR HTH family regulatory protein DA68_22785 PF03009 Glycerophosphoryl diester phosphodiesterase family DA68_22790 PF00912 Transglycosylase DA68_22790 PF00905 Penicillin binding protein transpeptidase domain DA68_22795 PF08741 YwhD family DA68_22800 PF02163 Peptidase family M50 DA68_22805 PF01361 Tautomerase enzyme DA68_22810 PF01966 HD domain DA68_22815 PF01497 Periplasmic binding protein DA68_22820 PF00005 ABC transporter DA68_22825 PF01032 FecCD transport family DA68_22830 PF01032 FecCD transport family DA68_22835 PF07293 Protein of unknown function (DUF1450) DA68_22845 PF03099 Biotin/lipoate A/B protein ligase family DA68_22850 PF01515 Phosphate acetyl/butaryl transferase DA68_22860 PF00768 D-alanyl-D-alanine carboxypeptidase DA68_22860 PF07943 Penicillin-binding protein 5, C-terminal domain DA68_22865 PF07486 Cell Wall Hydrolase DA68_22870 PF09671 Spore coat protein (Spore_GerQ) DA68_22875 PF04241 Protein of unknown function (DUF423) DA68_22885 PF02254 TrkA-N domain DA68_22885 PF07885 Ion channel DA68_22890 PF00860 Permease family DA68_22900 PF12823 Domain of unknown function (DUF3817) DA68_22905 PF03167 Uracil DNA glycosylase superfamily DA68_22910 PF12679 ABC-2 family transporter protein DA68_22915 PF00005 ABC transporter DA68_22920 PF13472 GDSL-like Lipase/Acylhydrolase family DA68_22925 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DA68_22925 PF00356 Bacterial regulatory proteins, lacI family DA68_22935 PF01842 ACT domain DA68_22935 PF00742 Homoserine dehydrogenase DA68_22935 PF03447 Homoserine dehydrogenase, NAD binding domain DA68_22940 PF04204 Homoserine O-succinyltransferase DA68_22945 PF01053 Cys/Met metabolism PLP-dependent enzyme DA68_22955 PF13419 Haloacid dehalogenase-like hydrolase DA68_22960 PF00027 Cyclic nucleotide-binding domain DA68_22965 PF02525 Flavodoxin-like fold DA68_22970 PF00196 Bacterial regulatory proteins, luxR family DA68_22970 PF00072 Response regulator receiver domain DA68_22975 PF07730 Histidine kinase DA68_22975 PF13185 GAF domain DA68_22980 PF08543 Phosphomethylpyrimidine kinase DA68_22985 PF00990 Diguanylate cyclase, GGDEF domain DA68_22985 PF07694 5TMR of 5TMR-LYT DA68_22990 PF04328 Selenoprotein, putative DA68_22995 PF13722 5TM C-terminal transporter carbon starvation CstA DA68_22995 PF02554 Carbon starvation protein CstA DA68_23000 PF00072 Response regulator receiver domain DA68_23000 PF04397 LytTr DNA-binding domain DA68_23005 PF07690 Major Facilitator Superfamily DA68_23010 PF03808 Glycosyl transferase WecB/TagA/CpsF family DA68_23015 PF13439 Glycosyltransferase Family 4 DA68_23015 PF00534 Glycosyl transferases group 1 DA68_23025 PF03458 UPF0126 domain DA68_23030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA68_23040 PF03061 Thioesterase superfamily DA68_23050 PF00535 Glycosyl transferase family 2 DA68_23065 PF00535 Glycosyl transferase family 2 DA68_23070 PF00005 ABC transporter DA68_23070 PF12848 ABC transporter DA68_23075 PF00440 Bacterial regulatory proteins, tetR family DA68_23080 PF00873 AcrB/AcrD/AcrF family DA68_23085 PF01641 SelR domain DA68_23085 PF01625 Peptide methionine sulfoxide reductase DA68_23090 PF01594 AI-2E family transporter DA68_23095 PF04172 LrgB-like family DA68_23100 PF03788 LrgA family DA68_23105 PF00072 Response regulator receiver domain DA68_23105 PF04397 LytTr DNA-binding domain DA68_23110 PF06580 Histidine kinase DA68_23110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_23110 PF13492 GAF domain DA68_23110 PF07694 5TMR of 5TMR-LYT DA68_23115 PF07690 Major Facilitator Superfamily DA68_23120 PF02028 BCCT, betaine/carnitine/choline family transporter DA68_23125 PF02898 Nitric oxide synthase, oxygenase domain DA68_23130 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DA68_23130 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DA68_23140 PF02293 AmiS/UreI family transporter DA68_23145 PF16363 GDP-mannose 4,6 dehydratase DA68_23150 PF03006 Haemolysin-III related DA68_23160 PF00270 DEAD/DEAH box helicase DA68_23160 PF03880 DbpA RNA binding domain DA68_23160 PF00271 Helicase conserved C-terminal domain DA68_23165 PF00478 IMP dehydrogenase / GMP reductase domain DA68_23170 PF01432 Peptidase family M3 DA68_23170 PF08439 Oligopeptidase F DA68_23180 PF00989 PAS fold DA68_23180 PF13188 PAS domain DA68_23180 PF00512 His Kinase A (phospho-acceptor) domain DA68_23180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_23180 PF13426 PAS domain DA68_23185 PF02590 Predicted SPOUT methyltransferase DA68_23195 PF13180 PDZ domain DA68_23200 PF00753 Metallo-beta-lactamase superfamily DA68_23205 PF09648 YycH protein DA68_23215 PF13426 PAS domain DA68_23215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_23215 PF00672 HAMP domain DA68_23215 PF00512 His Kinase A (phospho-acceptor) domain DA68_23220 PF00486 Transcriptional regulatory protein, C terminal DA68_23220 PF00072 Response regulator receiver domain DA68_23245 PF00709 Adenylosuccinate synthetase DA68_23250 PF00772 DnaB-like helicase N terminal domain DA68_23250 PF03796 DnaB-like helicase C terminal domain DA68_23255 PF03948 Ribosomal protein L9, C-terminal domain DA68_23255 PF01281 Ribosomal protein L9, N-terminal domain DA68_23260 PF02272 DHHA1 domain DA68_23260 PF01368 DHH family DA68_23265 PF09991 Predicted membrane protein (DUF2232) DA68_23270 PF01084 Ribosomal protein S18 DA68_23275 PF00436 Single-strand binding protein family DA68_23280 PF01250 Ribosomal protein S6 DA68_23285 PF01926 50S ribosome-binding GTPase DA68_23285 PF06071 Protein of unknown function (DUF933) DA68_23290 PF06107 Bacterial protein of unknown function (DUF951) DA68_23295 PF00924 Mechanosensitive ion channel DA68_23300 PF06866 Protein of unknown function (DUF1256) DA68_23305 PF02195 ParB-like nuclease domain DA68_23305 PF17762 HTH domain found in ParB protein DA68_23310 PF13614 AAA domain DA68_23315 PF02195 ParB-like nuclease domain DA68_23315 PF17762 HTH domain found in ParB protein DA68_23320 PF02527 rRNA small subunit methyltransferase G DA68_23325 PF13932 GidA associated domain DA68_23325 PF01134 Glucose inhibited division protein A DA68_23330 PF10396 GTP-binding protein TrmE N-terminus DA68_23330 PF01926 50S ribosome-binding GTPase DA68_23330 PF12631 MnmE helical domain DA68_23335 PF14804 Jag N-terminus DA68_23335 PF01424 R3H domain DA68_23340 PF02096 60Kd inner membrane protein DA68_23345 PF00825 Ribonuclease P DA68_23350 PF00468 Ribosomal protein L34 DA68_23355 PF00308 Bacterial dnaA protein DA68_23355 PF08299 Bacterial dnaA protein helix-turn-helix DA68_23355 PF11638 DnaA N-terminal domain DA68_23360 PF00712 DNA polymerase III beta subunit, N-terminal domain DA68_23360 PF02767 DNA polymerase III beta subunit, central domain DA68_23360 PF02768 DNA polymerase III beta subunit, C-terminal domain DA68_23370 PF02463 RecF/RecN/SMC N terminal domain DA68_23375 PF00986 DNA gyrase B subunit, carboxyl terminus DA68_23375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_23375 PF00204 DNA gyrase B DA68_23375 PF01751 Toprim domain DA68_23380 PF00521 DNA gyrase/topoisomerase IV, subunit A DA68_23380 PF03989 DNA gyrase C-terminal domain, beta-propeller DA68_23410 PF14175 YaaC-like Protein DA68_23415 PF00478 IMP dehydrogenase / GMP reductase domain DA68_23415 PF00571 CBS domain DA68_23420 PF00768 D-alanyl-D-alanine carboxypeptidase DA68_23420 PF07943 Penicillin-binding protein 5, C-terminal domain DA68_23425 PF01680 SOR/SNZ family DA68_23430 PF01174 SNO glutamine amidotransferase family DA68_23435 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DA68_23435 PF02403 Seryl-tRNA synthetase N-terminal domain DA68_23450 PF01712 Deoxynucleoside kinase DA68_23455 PF01712 Deoxynucleoside kinase DA68_23460 PF00857 Isochorismatase family DA68_23465 PF14437 MafB19-like deaminase DA68_23475 PF12169 DNA polymerase III subunits gamma and tau domain III DA68_23480 PF02575 YbaB/EbfC DNA-binding family DA68_23485 PF13662 Toprim domain DA68_23485 PF02132 RecR protein DA68_23490 PF10704 Protein of unknown function (DUF2508) DA68_23495 PF07441 SigmaK-factor processing regulatory protein BofA DA68_23530 PF01276 Orn/Lys/Arg decarboxylase, major domain DA68_23530 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DA68_23535 PF02223 Thymidylate kinase DA68_23540 PF09115 DNA polymerase III, delta subunit, C terminal DA68_23545 PF04468 PSP1 C-terminal conserved region DA68_23550 PF06156 Initiation control protein YabA DA68_23555 PF05175 Methyltransferase small domain DA68_23560 PF01541 GIY-YIG catalytic domain DA68_23565 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DA68_23570 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DA68_23570 PF18277 AbrB C-terminal domain DA68_23575 PF01588 Putative tRNA binding domain DA68_23575 PF09334 tRNA synthetases class I (M) DA68_23575 PF08264 Anticodon-binding domain of tRNA DA68_23580 PF01026 TatD related DNase DA68_23585 PF13331 Domain of unknown function (DUF4093) DA68_23585 PF13662 Toprim domain DA68_23590 PF00398 Ribosomal RNA adenine dimethylase DA68_23595 PF05582 YabG peptidase U57 DA68_23600 PF06257 Biofilm formation stimulator VEG DA68_23605 PF00269 Small, acid-soluble spore proteins, alpha/beta type DA68_23610 PF00288 GHMP kinases N terminal domain DA68_23610 PF08544 GHMP kinases C terminal DA68_23615 PF00156 Phosphoribosyl transferase domain DA68_23615 PF09182 Bacterial purine repressor, N-terminal DA68_23620 PF01042 Endoribonuclease L-PSP DA68_23625 PF04026 SpoVG DA68_23630 PF00132 Bacterial transferase hexapeptide (six repeats) DA68_23630 PF00483 Nucleotidyl transferase DA68_23635 PF14572 Phosphoribosyl synthetase-associated domain DA68_23635 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DA68_23640 PF01195 Peptidyl-tRNA hydrolase DA68_23650 PF17757 UvrB interaction domain DA68_23650 PF03461 TRCF domain DA68_23650 PF00271 Helicase conserved C-terminal domain DA68_23650 PF02559 CarD-like/TRCF domain DA68_23650 PF00270 DEAD/DEAH box helicase DA68_23655 PF15714 Stage V sporulation protein T C-terminal, transcription factor DA68_23655 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DA68_23660 PF01943 Polysaccharide biosynthesis protein DA68_23660 PF14667 Polysaccharide biosynthesis C-terminal domain DA68_23665 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DA68_23665 PF03819 MazG nucleotide pyrophosphohydrolase domain DA68_23670 PF01479 S4 domain DA68_23675 PF07873 YabP family DA68_23680 PF09578 Spore cortex protein YabQ (Spore_YabQ) DA68_23690 PF00575 S1 RNA binding domain DA68_23705 PF07228 Stage II sporulation protein E (SpoIIE) DA68_23710 PF11734 TilS substrate C-terminal domain DA68_23710 PF09179 TilS substrate binding domain DA68_23710 PF01171 PP-loop family DA68_23720 PF17862 AAA+ lid domain DA68_23720 PF00004 ATPase family associated with various cellular activities (AAA) DA68_23720 PF06480 FtsH Extracellular DA68_23720 PF01434 Peptidase family M41 DA68_23725 PF03309 Type III pantothenate kinase DA68_23730 PF01430 Hsp33 protein DA68_23735 PF00291 Pyridoxal-phosphate dependent enzyme DA68_23740 PF04715 Anthranilate synthase component I, N terminal region DA68_23740 PF00425 chorismate binding enzyme DA68_23745 PF00117 Glutamine amidotransferase class-I DA68_23750 PF01063 Amino-transferase class IV DA68_23755 PF00809 Pterin binding enzyme DA68_23760 PF02152 Dihydroneopterin aldolase DA68_23765 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DA68_23770 PF01381 Helix-turn-helix DA68_23775 PF01207 Dihydrouridine synthase (Dus) DA68_23780 PF01336 OB-fold nucleic acid binding domain DA68_23780 PF00152 tRNA synthetases class II (D, K and N) DA68_23860 PF05848 CtsR N-terminal HTH domain DA68_23860 PF17727 CtsR C-terminal dimerization domain DA68_23865 PF02151 UvrB/uvrC motif DA68_23870 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain DA68_23875 PF02861 Clp amino terminal domain, pathogenicity island component DA68_23875 PF17871 AAA lid domain DA68_23875 PF07724 AAA domain (Cdc48 subfamily) DA68_23875 PF00004 ATPase family associated with various cellular activities (AAA) DA68_23875 PF10431 C-terminal, D2-small domain, of ClpB protein DA68_23880 PF18073 Rubredoxin metal binding domain DA68_23885 PF10635 DisA bacterial checkpoint controller linker region DA68_23885 PF02457 DisA bacterial checkpoint controller nucleotide-binding DA68_23895 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DA68_23900 PF02542 YgbB family DA68_23905 PF00749 tRNA synthetases class I (E and Q), catalytic domain DA68_23910 PF06426 Serine acetyltransferase, N-terminal DA68_23910 PF00132 Bacterial transferase hexapeptide (six repeats) DA68_23915 PF09190 DALR domain DA68_23915 PF01406 tRNA synthetases class I (C) catalytic domain DA68_23920 PF00636 Ribonuclease III domain DA68_23925 PF08032 RNA 2'-O ribose methyltransferase substrate binding DA68_23925 PF00588 SpoU rRNA Methylase family DA68_23930 PF05991 YacP-like NYN domain DA68_23935 PF08281 Sigma-70, region 4 DA68_23935 PF04542 Sigma-70 region 2 DA68_23940 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DA68_23945 PF00467 KOW motif DA68_23945 PF02357 Transcription termination factor nusG DA68_23950 PF00298 Ribosomal protein L11, RNA binding domain DA68_23950 PF03946 Ribosomal protein L11, N-terminal domain DA68_23955 PF00687 Ribosomal protein L1p/L10e family DA68_23960 PF00466 Ribosomal protein L10 DA68_23965 PF00542 Ribosomal protein L7/L12 C-terminal domain DA68_23965 PF16320 Ribosomal protein L7/L12 dimerisation domain DA68_23970 PF05175 Methyltransferase small domain DA68_23975 PF04560 RNA polymerase Rpb2, domain 7 DA68_23975 PF00562 RNA polymerase Rpb2, domain 6 DA68_23975 PF04561 RNA polymerase Rpb2, domain 2 DA68_23975 PF04563 RNA polymerase beta subunit DA68_23975 PF04565 RNA polymerase Rpb2, domain 3 DA68_23975 PF10385 RNA polymerase beta subunit external 1 domain DA68_23980 PF04998 RNA polymerase Rpb1, domain 5 DA68_23980 PF05000 RNA polymerase Rpb1, domain 4 DA68_23980 PF04983 RNA polymerase Rpb1, domain 3 DA68_23980 PF00623 RNA polymerase Rpb1, domain 2 DA68_23980 PF04997 RNA polymerase Rpb1, domain 1 DA68_23985 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family DA68_23990 PF00164 Ribosomal protein S12/S23 DA68_23995 PF00177 Ribosomal protein S7p/S5e DA68_24000 PF03144 Elongation factor Tu domain 2 DA68_24000 PF00009 Elongation factor Tu GTP binding domain DA68_24000 PF03764 Elongation factor G, domain IV DA68_24000 PF14492 Elongation Factor G, domain II DA68_24000 PF00679 Elongation factor G C-terminus DA68_24005 PF03143 Elongation factor Tu C-terminal domain DA68_24005 PF03144 Elongation factor Tu domain 2 DA68_24005 PF00009 Elongation factor Tu GTP binding domain DA68_24010 PF00338 Ribosomal protein S10p/S20e DA68_24015 PF00297 Ribosomal protein L3 DA68_24020 PF00573 Ribosomal protein L4/L1 family DA68_24025 PF00276 Ribosomal protein L23 DA68_24030 PF03947 Ribosomal Proteins L2, C-terminal domain DA68_24030 PF00181 Ribosomal Proteins L2, RNA binding domain DA68_24035 PF00203 Ribosomal protein S19 DA68_24040 PF00237 Ribosomal protein L22p/L17e DA68_24045 PF00189 Ribosomal protein S3, C-terminal domain DA68_24045 PF07650 KH domain DA68_24050 PF00252 Ribosomal protein L16p/L10e DA68_24055 PF00831 Ribosomal L29 protein DA68_24060 PF00366 Ribosomal protein S17 DA68_24065 PF00238 Ribosomal protein L14p/L23e DA68_24070 PF00467 KOW motif DA68_24070 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DA68_24075 PF00673 ribosomal L5P family C-terminus DA68_24075 PF00281 Ribosomal protein L5 DA68_24080 PF00253 Ribosomal protein S14p/S29e DA68_24085 PF00410 Ribosomal protein S8 DA68_24090 PF00347 Ribosomal protein L6 DA68_24095 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DA68_24100 PF03719 Ribosomal protein S5, C-terminal domain DA68_24100 PF00333 Ribosomal protein S5, N-terminal domain DA68_24105 PF00327 Ribosomal protein L30p/L7e DA68_24110 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DA68_24115 PF00344 SecY translocase DA68_24120 PF05191 Adenylate kinase, active site lid DA68_24125 PF00557 Metallopeptidase family M24 DA68_24130 PF01176 Translation initiation factor 1A / IF-1 DA68_24135 PF00444 Ribosomal protein L36 DA68_24140 PF00416 Ribosomal protein S13/S18 DA68_24145 PF00411 Ribosomal protein S11 DA68_24150 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DA68_24150 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DA68_24150 PF01000 RNA polymerase Rpb3/RpoA insert domain DA68_24155 PF01196 Ribosomal protein L17 DA68_24160 PF00005 ABC transporter DA68_24165 PF00005 ABC transporter DA68_24170 PF02361 Cobalt transport protein DA68_24175 PF01416 tRNA pseudouridine synthase DA68_24180 PF00572 Ribosomal protein L13 DA68_24185 PF00380 Ribosomal protein S9/S16 DA68_24195 PF01520 N-acetylmuramoyl-L-alanine amidase DA68_24200 PF10609 NUBPL iron-transfer P-loop NTPase DA68_24205 PF17898 Spore germination GerD central core domain DA68_24210 PF14089 KinB-signalling pathway activation in sporulation DA68_24215 PF01522 Polysaccharide deacetylase DA68_24285 PF02595 Glycerate kinase family DA68_24290 PF00491 Arginase family DA68_24295 PF02457 DisA bacterial checkpoint controller nucleotide-binding DA68_24300 PF07949 YbbR-like protein DA68_24305 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DA68_24305 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DA68_24305 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DA68_24305 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DA68_24315 PF01380 SIS domain DA68_24325 PF00326 Prolyl oligopeptidase family DA68_24325 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region DA68_24345 PF00528 Binding-protein-dependent transport system inner membrane component DA68_24350 PF00005 ABC transporter DA68_24350 PF09383 NIL domain DA68_24355 PF03180 NLPA lipoprotein DA68_24370 PF01565 FAD binding domain DA68_24375 PF07690 Major Facilitator Superfamily DA68_24385 PF07690 Major Facilitator Superfamily DA68_24400 PF12833 Helix-turn-helix domain DA68_24415 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DA68_24420 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DA68_24425 PF00248 Aldo/keto reductase family DA68_24430 PF14748 Pyrroline-5-carboxylate reductase dimerisation DA68_24430 PF03807 NADP oxidoreductase coenzyme F420-dependent DA68_24435 PF06800 Sugar transport protein DA68_24440 PF00528 Binding-protein-dependent transport system inner membrane component DA68_24450 PF12727 PBP superfamily domain DA68_24450 PF12728 Helix-turn-helix domain DA68_24455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA68_24455 PF03466 LysR substrate binding domain DA68_24460 PF00892 EamA-like transporter family DA68_24465 PF14142 YrzO-like protein DA68_24470 PF01553 Acyltransferase DA68_24475 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DA68_24475 PF00356 Bacterial regulatory proteins, lacI family DA68_24485 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DA68_24485 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DA68_24510 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) DA68_24530 PF00005 ABC transporter DA68_24530 PF16326 ABC transporter C-terminal domain DA68_24530 PF12848 ABC transporter DA68_24540 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DA68_24545 PF00528 Binding-protein-dependent transport system inner membrane component DA68_24555 PF00005 ABC transporter DA68_24555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DA68_24560 PF00005 ABC transporter DA68_24560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DA68_24595 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DA68_24600 PF01557 Fumarylacetoacetate (FAA) hydrolase family DA68_24610 PF13520 Amino acid permease DA68_24615 PF07690 Major Facilitator Superfamily DA68_24620 PF07478 D-ala D-ala ligase C-terminus DA68_24620 PF01820 D-ala D-ala ligase N-terminus DA68_24625 PF08245 Mur ligase middle domain DA68_24625 PF01225 Mur ligase family, catalytic domain DA68_24625 PF02875 Mur ligase family, glutamate ligase domain DA68_24630 PF00271 Helicase conserved C-terminal domain DA68_24630 PF00270 DEAD/DEAH box helicase DA68_24635 PF03851 UV-endonuclease UvdE DA68_24640 PF01694 Rhomboid family DA68_24645 PF01648 4'-phosphopantetheinyl transferase superfamily DA68_24655 PF00842 Alanine racemase, C-terminal domain DA68_24655 PF01168 Alanine racemase, N-terminal domain DA68_24660 PF01402 Ribbon-helix-helix protein, copG family DA68_24665 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system DA68_24670 PF16921 Tex protein YqgF-like domain DA68_24670 PF09371 Tex-like protein N-terminal domain DA68_24670 PF00575 S1 RNA binding domain DA68_24670 PF17674 HHH domain DA68_24675 PF10263 SprT-like family DA68_24675 PF17283 SprT-like zinc ribbon domain DA68_24765 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DA68_24770 PF00814 Glycoprotease family DA68_24775 PF00583 Acetyltransferase (GNAT) family DA68_24780 PF00814 Glycoprotease family DA68_24785 PF00005 ABC transporter DA68_24785 PF12848 ABC transporter DA68_24785 PF16326 ABC transporter C-terminal domain DA68_24790 PF06971 Putative DNA-binding protein N-terminus DA68_24790 PF02629 CoA binding domain DA68_24800 PF02517 CPBP intramembrane metalloprotease DA68_24805 PF00166 Chaperonin 10 Kd subunit DA68_24810 PF00118 TCP-1/cpn60 chaperonin family DA68_24815 PF00117 Glutamine amidotransferase class-I DA68_24815 PF02540 NAD synthase DA68_24815 PF00958 GMP synthase C terminal domain DA68_24820 PF00860 Permease family DA68_24825 PF00072 Response regulator receiver domain DA68_24825 PF00486 Transcriptional regulatory protein, C terminal DA68_24830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_24830 PF00512 His Kinase A (phospho-acceptor) domain DA68_24830 PF00989 PAS fold DA68_24830 PF16736 Single Cache-like DA68_24855 PF01323 DSBA-like thioredoxin domain DA68_24880 PF02673 Bacitracin resistance protein BacA DA68_24890 PF00005 ABC transporter DA68_24895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_24895 PF00512 His Kinase A (phospho-acceptor) domain DA68_24900 PF00486 Transcriptional regulatory protein, C terminal DA68_24900 PF00072 Response regulator receiver domain DA68_24920 PF05045 Rhamnan synthesis protein F DA68_24920 PF14307 Glycosyltransferase WbsX DA68_24935 PF01370 NAD dependent epimerase/dehydratase family DA68_24945 PF00535 Glycosyl transferase family 2 DA68_24965 PF00892 EamA-like transporter family DA68_24995 PF00731 AIR carboxylase DA68_25000 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DA68_25000 PF02222 ATP-grasp domain DA68_25005 PF00206 Lyase DA68_25005 PF10397 Adenylosuccinate lyase C-terminus DA68_25010 PF01259 SAICAR synthetase DA68_25015 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase DA68_25025 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DA68_25025 PF02769 AIR synthase related protein, C-terminal domain DA68_25025 PF00586 AIR synthase related protein, N-terminal domain DA68_25030 PF00156 Phosphoribosyl transferase domain DA68_25035 PF02769 AIR synthase related protein, C-terminal domain DA68_25035 PF00586 AIR synthase related protein, N-terminal domain DA68_25040 PF00551 Formyl transferase DA68_25045 PF02142 MGS-like domain DA68_25045 PF01808 AICARFT/IMPCHase bienzyme DA68_25050 PF02844 Phosphoribosylglycinamide synthetase, N domain DA68_25050 PF02843 Phosphoribosylglycinamide synthetase, C domain DA68_25050 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DA68_25070 PF01884 PcrB family DA68_25075 PF13361 UvrD-like helicase C-terminal domain DA68_25075 PF00580 UvrD/REP helicase N-terminal domain DA68_25080 PF12826 Helix-hairpin-helix motif DA68_25080 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DA68_25080 PF03120 NAD-dependent DNA ligase OB-fold domain DA68_25080 PF01653 NAD-dependent DNA ligase adenylation domain DA68_25080 PF00533 BRCA1 C Terminus (BRCT) domain DA68_25085 PF07537 CamS sex pheromone cAM373 precursor DA68_25090 PF01925 Sulfite exporter TauE/SafE DA68_25095 PF00171 Aldehyde dehydrogenase family DA68_25100 PF00857 Isochorismatase family DA68_25105 PF00005 ABC transporter DA68_25105 PF09383 NIL domain DA68_25110 PF00528 Binding-protein-dependent transport system inner membrane component DA68_25115 PF03180 NLPA lipoprotein DA68_25125 PF17886 HSP20-like domain found in ArsA DA68_25125 PF02374 Anion-transporting ATPase DA68_25130 PF01047 MarR family DA68_25135 PF05360 yiaA/B two helix domain DA68_25140 PF02686 Glu-tRNAGln amidotransferase C subunit DA68_25145 PF01425 Amidase DA68_25150 PF02934 GatB/GatE catalytic domain DA68_25150 PF02637 GatB domain DA68_25155 PF00781 Diacylglycerol kinase catalytic domain DA68_25160 PF12323 Helix-turn-helix domain DA68_25160 PF01385 Probable transposase DA68_25160 PF07282 Putative transposase DNA-binding domain DA68_25165 PF13419 Haloacid dehalogenase-like hydrolase DA68_25170 PF00202 Aminotransferase class-III DA68_25175 PF00158 Sigma-54 interaction domain DA68_25180 PF00171 Aldehyde dehydrogenase family DA68_25185 PF00893 Small Multidrug Resistance protein DA68_25195 PF02073 Thermophilic metalloprotease (M29) DA68_25210 PF07670 Nucleoside recognition DA68_25210 PF01773 Na+ dependent nucleoside transporter N-terminus DA68_25210 PF07662 Na+ dependent nucleoside transporter C-terminus DA68_25215 PF01938 TRAM domain DA68_25215 PF13847 Methyltransferase domain DA68_25215 PF05958 tRNA (Uracil-5-)-methyltransferase DA68_25220 PF01207 Dihydrouridine synthase (Dus) DA68_25225 PF07308 Protein of unknown function (DUF1456) DA68_25240 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DA68_25240 PF13378 Enolase C-terminal domain-like DA68_25255 PF01546 Peptidase family M20/M25/M40 DA68_25255 PF07687 Peptidase dimerisation domain DA68_25265 PF13192 Thioredoxin domain DA68_25265 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA68_25270 PF00578 AhpC/TSA family DA68_25275 PF01636 Phosphotransferase enzyme family DA68_25285 PF00596 Class II Aldolase and Adducin N-terminal domain DA68_25290 PF01032 FecCD transport family DA68_25295 PF01032 FecCD transport family DA68_25300 PF01497 Periplasmic binding protein DA68_25315 PF12728 Helix-turn-helix domain DA68_25340 PF00512 His Kinase A (phospho-acceptor) domain DA68_25340 PF13426 PAS domain DA68_25340 PF13188 PAS domain DA68_25340 PF00989 PAS fold DA68_25340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_25360 PF10127 RNA repair pathway DNA polymerase beta family DA68_25365 PF07690 Major Facilitator Superfamily DA68_25370 PF01266 FAD dependent oxidoreductase DA68_25370 PF00355 Rieske [2Fe-2S] domain DA68_25380 PF00528 Binding-protein-dependent transport system inner membrane component DA68_25385 PF00497 Bacterial extracellular solute-binding proteins, family 3 DA68_25390 PF00005 ABC transporter DA68_25395 PF12729 Four helix bundle sensory module for signal transduction DA68_25395 PF00672 HAMP domain DA68_25395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA68_25400 PF02863 Arginine repressor, C-terminal domain DA68_25400 PF01316 Arginine repressor, DNA binding domain DA68_25410 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DA68_25410 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DA68_25415 PF13520 Amino acid permease DA68_25420 PF00696 Amino acid kinase family DA68_25425 PF13545 Crp-like helix-turn-helix domain DA68_25425 PF00027 Cyclic nucleotide-binding domain DA68_25440 PF00128 Alpha amylase, catalytic domain DA68_25440 PF16657 Maltogenic Amylase, C-terminal domain DA68_25445 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DA68_25445 PF00367 phosphotransferase system, EIIB DA68_25445 PF02378 Phosphotransferase system, EIIC DA68_25450 PF03372 Endonuclease/Exonuclease/phosphatase family DA68_25455 PF01061 ABC-2 type transporter DA68_25460 PF01131 DNA topoisomerase DA68_25460 PF01751 Toprim domain DA68_25465 PF02110 Hydroxyethylthiazole kinase family DA68_25470 PF02581 Thiamine monophosphate synthase DA68_25475 PF03605 Anaerobic c4-dicarboxylate membrane transporter DA68_25480 PF00672 HAMP domain DA68_25480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA68_25485 PF00668 Condensation domain DA68_25485 PF07993 Male sterility protein DA68_25485 PF13193 AMP-binding enzyme C-terminal domain DA68_25485 PF00550 Phosphopantetheine attachment site DA68_25485 PF00501 AMP-binding enzyme DA68_25490 PF01910 Thiamine-binding protein DA68_25495 PF00528 Binding-protein-dependent transport system inner membrane component DA68_25505 PF00005 ABC transporter DA68_25510 PF00041 Fibronectin type III domain DA68_25510 PF00704 Glycosyl hydrolases family 18 DA68_25535 PF08360 QacR-like protein, C-terminal region DA68_25535 PF00440 Bacterial regulatory proteins, tetR family DA68_25550 PF11700 Vacuole effluxer Atg22 like DA68_25565 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DA68_25565 PF09180 Prolyl-tRNA synthetase, C-terminal DA68_25565 PF03129 Anticodon binding domain DA68_25575 PF00480 ROK family DA68_25580 PF02342 TerD domain DA68_25585 PF02342 TerD domain DA68_25590 PF02342 TerD domain DA68_25595 PF03741 Integral membrane protein TerC family DA68_25600 PF14266 Putative component of 'biosynthetic module' DA68_25605 PF05816 Toxic anion resistance protein (TelA) DA68_25610 PF00689 Cation transporting ATPase, C-terminus DA68_25610 PF00690 Cation transporter/ATPase, N-terminus DA68_25615 PF06569 Protein of unknown function (DUF1128) DA68_25620 PF01451 Low molecular weight phosphotyrosine protein phosphatase DA68_25630 PF03631 Virulence factor BrkB DA68_25640 PF00892 EamA-like transporter family DA68_25650 PF10502 Signal peptidase, peptidase S26 DA68_25660 PF09335 SNARE associated Golgi protein DA68_25675 PF16242 Pyridoxamine 5'-phosphate oxidase like DA68_25680 PF01699 Sodium/calcium exchanger protein DA68_25685 PF14167 YfkD-like protein DA68_25690 PF08756 YfkB-like domain DA68_25690 PF04055 Radical SAM superfamily DA68_25700 PF05681 Fumarate hydratase (Fumerase) DA68_25700 PF05683 Fumarase C-terminus DA68_25705 PF01522 Polysaccharide deacetylase DA68_25710 PF00730 HhH-GPD superfamily base excision DNA repair protein DA68_25715 PF05958 tRNA (Uracil-5-)-methyltransferase DA68_25715 PF01938 TRAM domain DA68_25720 PF01416 tRNA pseudouridine synthase DA68_25730 PF13426 PAS domain DA68_25730 PF02954 Bacterial regulatory protein, Fis family DA68_25730 PF00158 Sigma-54 interaction domain DA68_25740 PF00324 Amino acid permease DA68_25745 PF07687 Peptidase dimerisation domain DA68_25745 PF01546 Peptidase family M20/M25/M40 DA68_25765 PF04960 Glutaminase DA68_25770 PF00367 phosphotransferase system, EIIB DA68_25770 PF02378 Phosphotransferase system, EIIC DA68_25775 PF00144 Beta-lactamase DA68_25790 PF00535 Glycosyl transferase family 2 DA68_25795 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DA68_25795 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DA68_25795 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DA68_25800 PF02911 Formyl transferase, C-terminal domain DA68_25800 PF01370 NAD dependent epimerase/dehydratase family DA68_25800 PF00551 Formyl transferase DA68_25805 PF00535 Glycosyl transferase family 2 DA68_25815 PF01228 Glycine radical DA68_25815 PF02901 Pyruvate formate lyase-like DA68_25820 PF04055 Radical SAM superfamily DA68_25825 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase DA68_25825 PF04101 Glycosyltransferase family 28 C-terminal domain DA68_25840 PF01979 Amidohydrolase family DA68_25845 PF01370 NAD dependent epimerase/dehydratase family DA68_25845 PF08338 Domain of unknown function (DUF1731) DA68_25850 PF02631 RecX family DA68_25865 PF08176 Small acid-soluble spore protein K family DA68_25870 PF14043 WVELL protein DA68_25875 PF04307 LexA-binding, inner membrane-associated putative hydrolase DA68_25880 PF00730 HhH-GPD superfamily base excision DNA repair protein DA68_25880 PF14815 NUDIX domain DA68_25890 PF04259 Small, acid-soluble spore protein, gamma-type DA68_25895 PF14182 YgaB-like protein DA68_25900 PF04167 Protein of unknown function (DUF402) DA68_25905 PF00005 ABC transporter DA68_25905 PF00664 ABC transporter transmembrane region DA68_25910 PF06081 Aromatic acid exporter family member 1 DA68_25915 PF01645 Conserved region in glutamate synthase DA68_25915 PF04898 Glutamate synthase central domain DA68_25915 PF00310 Glutamine amidotransferases class-II DA68_25915 PF01493 GXGXG motif DA68_25920 PF00202 Aminotransferase class-III DA68_25925 PF00005 ABC transporter DA68_25940 PF07885 Ion channel DA68_25945 PF00578 AhpC/TSA family DA68_25950 PF01475 Ferric uptake regulator family DA68_25960 PF11023 Zinc-ribbon containing domain DA68_26055 PF01709 Transcriptional regulator DA68_26060 PF13344 Haloacid dehalogenase-like hydrolase DA68_26060 PF00293 NUDIX domain DA68_26065 PF00912 Transglycosylase DA68_26065 PF00905 Penicillin binding protein transpeptidase domain DA68_26070 PF13462 Thioredoxin DA68_26080 PF08331 Domain of unknown function (DUF1730) DA68_26085 PF12671 Putative amidase domain DA68_26090 PF00588 SpoU rRNA Methylase family DA68_26095 PF00990 Diguanylate cyclase, GGDEF domain DA68_26095 PF00563 EAL domain DA68_26095 PF00498 FHA domain DA68_26100 PF06798 PrkA serine protein kinase C-terminal domain DA68_26100 PF08298 PrkA AAA domain DA68_26105 PF04285 Protein of unknown function (DUF444) DA68_26120 PF02028 BCCT, betaine/carnitine/choline family transporter DA68_26125 PF08453 Peptidase family M9 N-terminal DA68_26125 PF18496 Collagenase G catalytic helper subdomain DA68_26125 PF01752 Collagenase DA68_26135 PF15975 Flotillin DA68_26135 PF01145 SPFH domain / Band 7 family DA68_26140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA68_26140 PF00672 HAMP domain DA68_26140 PF02743 Cache domain DA68_26145 PF17203 Single cache domain 3 DA68_26145 PF00989 PAS fold DA68_26145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_26145 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DA68_26150 PF12431 Transcriptional regulator DA68_26150 PF00072 Response regulator receiver domain DA68_26155 PF03600 Citrate transporter DA68_26180 PF04309 Glycerol-3-phosphate responsive antiterminator DA68_26185 PF17912 MalK OB fold domain DA68_26185 PF00005 ABC transporter DA68_26190 PF00528 Binding-protein-dependent transport system inner membrane component DA68_26195 PF00528 Binding-protein-dependent transport system inner membrane component DA68_26200 PF13416 Bacterial extracellular solute-binding protein DA68_26205 PF00149 Calcineurin-like phosphoesterase DA68_26210 PF00072 Response regulator receiver domain DA68_26210 PF00486 Transcriptional regulatory protein, C terminal DA68_26225 PF13529 Peptidase_C39 like family DA68_26230 PF00672 HAMP domain DA68_26230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA68_26230 PF02743 Cache domain DA68_26235 PF00989 PAS fold DA68_26235 PF17203 Single cache domain 3 DA68_26235 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DA68_26235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_26240 PF00072 Response regulator receiver domain DA68_26245 PF03390 2-hydroxycarboxylate transporter family DA68_26250 PF03949 Malic enzyme, NAD binding domain DA68_26250 PF00390 Malic enzyme, N-terminal domain DA68_26260 PF00892 EamA-like transporter family DA68_26265 PF00155 Aminotransferase class I and II DA68_26265 PF00392 Bacterial regulatory proteins, gntR family DA68_26275 PF00989 PAS fold DA68_26275 PF00672 HAMP domain DA68_26275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_26275 PF18698 Histidine kinase sensor domain DA68_26275 PF00512 His Kinase A (phospho-acceptor) domain DA68_26280 PF00486 Transcriptional regulatory protein, C terminal DA68_26280 PF00072 Response regulator receiver domain DA68_26295 PF02634 FdhD/NarQ family DA68_26300 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DA68_26300 PF00037 4Fe-4S binding domain DA68_26300 PF01568 Molydopterin dinucleotide binding domain DA68_26300 PF00384 Molybdopterin oxidoreductase DA68_26300 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DA68_26305 PF07849 Protein of unknown function (DUF1641) DA68_26315 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DA68_26315 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DA68_26320 PF13520 Amino acid permease DA68_26330 PF01022 Bacterial regulatory protein, arsR family DA68_26335 PF00403 Heavy-metal-associated domain DA68_26340 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DA68_26340 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain DA68_26340 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DA68_26350 PF01447 Thermolysin metallopeptidase, catalytic domain DA68_26350 PF03413 Peptidase propeptide and YPEB domain DA68_26350 PF02868 Thermolysin metallopeptidase, alpha-helical domain DA68_26350 PF07504 Fungalysin/Thermolysin Propeptide Motif DA68_26370 PF04294 VanW like protein DA68_26375 PF03816 Cell envelope-related transcriptional attenuator domain DA68_26380 PF01773 Na+ dependent nucleoside transporter N-terminus DA68_26380 PF07662 Na+ dependent nucleoside transporter C-terminus DA68_26385 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DA68_26390 PF00571 CBS domain DA68_26390 PF03471 Transporter associated domain DA68_26390 PF01595 Cyclin M transmembrane N-terminal domain DA68_26395 PF00206 Lyase DA68_26395 PF10415 Fumarase C C-terminus DA68_26400 PF02652 L-lactate permease DA68_26405 PF01022 Bacterial regulatory protein, arsR family DA68_26410 PF08141 Small acid-soluble spore protein H family DA68_26415 PF00854 POT family DA68_26420 PF01497 Periplasmic binding protein DA68_26425 PF01032 FecCD transport family DA68_26430 PF01032 FecCD transport family DA68_26435 PF00005 ABC transporter DA68_26440 PF08241 Methyltransferase domain DA68_26445 PF00155 Aminotransferase class I and II DA68_26450 PF01370 NAD dependent epimerase/dehydratase family DA68_26455 PF00293 NUDIX domain DA68_26455 PF13344 Haloacid dehalogenase-like hydrolase DA68_26460 PF00092 von Willebrand factor type A domain DA68_26465 PF07728 AAA domain (dynein-related subfamily) DA68_26470 PF13091 PLD-like domain DA68_26470 PF13396 Phospholipase_D-nuclease N-terminal DA68_26480 PF00563 EAL domain DA68_26480 PF00990 Diguanylate cyclase, GGDEF domain DA68_26480 PF03707 Bacterial signalling protein N terminal repeat DA68_26485 PF13520 Amino acid permease DA68_26490 PF07702 UTRA domain DA68_26490 PF00392 Bacterial regulatory proteins, gntR family DA68_26495 PF02378 Phosphotransferase system, EIIC DA68_26495 PF00367 phosphotransferase system, EIIB DA68_26500 PF16657 Maltogenic Amylase, C-terminal domain DA68_26500 PF00128 Alpha amylase, catalytic domain DA68_26515 PF03323 Bacillus/Clostridium GerA spore germination protein DA68_26520 PF01636 Phosphotransferase enzyme family DA68_26525 PF01235 Sodium:alanine symporter family DA68_26535 PF00005 ABC transporter DA68_26540 PF00497 Bacterial extracellular solute-binding proteins, family 3 DA68_26545 PF00528 Binding-protein-dependent transport system inner membrane component DA68_26550 PF00528 Binding-protein-dependent transport system inner membrane component DA68_26555 PF00324 Amino acid permease DA68_26570 PF04542 Sigma-70 region 2 DA68_26570 PF08281 Sigma-70, region 4 DA68_26580 PF08279 HTH domain DA68_26580 PF13280 WYL domain DA68_26585 PF01872 RibD C-terminal domain DA68_26590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_26590 PF00672 HAMP domain DA68_26590 PF00989 PAS fold DA68_26590 PF00512 His Kinase A (phospho-acceptor) domain DA68_26590 PF18698 Histidine kinase sensor domain DA68_26595 PF00072 Response regulator receiver domain DA68_26595 PF00486 Transcriptional regulatory protein, C terminal DA68_26605 PF00916 Sulfate permease family DA68_26605 PF01740 STAS domain DA68_26610 PF00582 Universal stress protein family DA68_26620 PF07690 Major Facilitator Superfamily DA68_26625 PF01047 MarR family DA68_26630 PF07690 Major Facilitator Superfamily DA68_26635 PF00356 Bacterial regulatory proteins, lacI family DA68_26640 PF00294 pfkB family carbohydrate kinase DA68_26645 PF05025 RbsD / FucU transport protein family DA68_26650 PF00005 ABC transporter DA68_26655 PF02653 Branched-chain amino acid transport system / permease component DA68_26660 PF13407 Periplasmic binding protein domain DA68_26670 PF01648 4'-phosphopantetheinyl transferase superfamily DA68_26675 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DA68_26675 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DA68_26680 PF00291 Pyridoxal-phosphate dependent enzyme DA68_26685 PF02423 Ornithine cyclodeaminase/mu-crystallin family DA68_26690 PF02195 ParB-like nuclease domain DA68_26705 PF01022 Bacterial regulatory protein, arsR family DA68_26710 PF00589 Phage integrase family DA68_26710 PF13495 Phage integrase, N-terminal SAM-like domain DA68_26720 PF12833 Helix-turn-helix domain DA68_26720 PF01497 Periplasmic binding protein DA68_26745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA68_26745 PF00512 His Kinase A (phospho-acceptor) domain DA68_26750 PF00486 Transcriptional regulatory protein, C terminal DA68_26750 PF00072 Response regulator receiver domain DA68_26760 PF00269 Small, acid-soluble spore proteins, alpha/beta type DA68_26775 PF07690 Major Facilitator Superfamily DA68_26780 PF01047 MarR family DA68_26785 PF01047 MarR family DA68_26790 PF00067 Cytochrome P450 DA68_26795 PF16715 Cyclodipeptide synthase DA68_26800 PF00672 HAMP domain DA68_26800 PF02743 Cache domain DA68_26800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DA68_26805 PF01609 Transposase DDE domain DA68_26815 PF00005 ABC transporter DA68_26825 PF04321 RmlD substrate binding domain DA68_26830 PF16363 GDP-mannose 4,6 dehydratase DA68_26835 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DA68_26840 PF00483 Nucleotidyl transferase DA68_26845 PF02801 Beta-ketoacyl synthase, C-terminal domain DA68_26845 PF00109 Beta-ketoacyl synthase, N-terminal domain DA68_26850 PF01571 Aminomethyltransferase folate-binding domain DA68_26850 PF08669 Glycine cleavage T-protein C-terminal barrel domain DA68_26865 PF07977 FabA-like domain DA68_26870 PF00550 Phosphopantetheine attachment site DA68_26880 PF00698 Acyl transferase domain DA68_26895 PF00005 ABC transporter DA68_26900 PF05045 Rhamnan synthesis protein F DA68_26900 PF14307 Glycosyltransferase WbsX DA68_26935 PF13610 DDE domain DA68_26940 PF00082 Subtilase family DA68_26955 PF03412 Peptidase C39 family DA68_26955 PF00005 ABC transporter DA68_26955 PF00664 ABC transporter transmembrane region DA68_26985 PF01609 Transposase DDE domain DA68_27005 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DA68_27005 PF18277 AbrB C-terminal domain DA68_27010 PF01510 N-acetylmuramoyl-L-alanine amidase DA68_27010 PF01471 Putative peptidoglycan binding domain DA68_27010 PF01476 LysM domain DA68_27020 PF03613 PTS system mannose/fructose/sorbose family IID component DA68_27025 PF03609 PTS system sorbose-specific iic component DA68_27030 PF03610 PTS system fructose IIA component DA68_27030 PF03830 PTS system sorbose subfamily IIB component DA68_27035 PF00230 Major intrinsic protein DA68_27040 PF00381 PTS HPr component phosphorylation site DA68_27045 PF02734 DAK2 domain DA68_27050 PF02733 Dak1 domain DA68_27055 PF01590 GAF domain DA68_27055 PF00158 Sigma-54 interaction domain DA68_27060 PF00465 Iron-containing alcohol dehydrogenase DA68_27065 PF02839 Carbohydrate binding domain DA68_27075 PF00155 Aminotransferase class I and II DA68_27075 PF00392 Bacterial regulatory proteins, gntR family DA68_27080 PF00005 ABC transporter DA68_27095 PF00388 Phosphatidylinositol-specific phospholipase C, X domain DA68_27105 PF00216 Bacterial DNA-binding protein DA68_27110 PF00005 ABC transporter DA68_27115 PF02687 FtsX-like permease family DA68_27115 PF12704 MacB-like periplasmic core domain DA68_27125 PF03060 Nitronate monooxygenase DA68_27155 PF13520 Amino acid permease DA68_27160 PF00291 Pyridoxal-phosphate dependent enzyme DA68_27165 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DA68_27165 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DA68_27170 PF13520 Amino acid permease DA68_27180 PF00056 lactate/malate dehydrogenase, NAD binding domain DA68_27180 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DA68_27185 PF01226 Formate/nitrite transporter DA68_27190 PF04324 BFD-like [2Fe-2S] binding domain DA68_27190 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DA68_27190 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA68_27190 PF18267 Rubredoxin NAD+ reductase C-terminal domain DA68_27200 PF12323 Helix-turn-helix domain DA68_27200 PF01385 Probable transposase DA68_27200 PF07282 Putative transposase DNA-binding domain DA68_27205 PF13529 Peptidase_C39 like family DA68_27210 PF00027 Cyclic nucleotide-binding domain DA68_27210 PF00325 Bacterial regulatory proteins, crp family DA68_27215 PF00301 Rubredoxin DA68_27220 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DA68_27220 PF18267 Rubredoxin NAD+ reductase C-terminal domain DA68_27220 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA68_27220 PF04324 BFD-like [2Fe-2S] binding domain DA68_27220 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DA68_27225 PF00258 Flavodoxin DA68_27225 PF00753 Metallo-beta-lactamase superfamily DA68_27235 PF14256 YwiC-like protein DA68_27245 PF03477 ATP cone domain DA68_27245 PF13597 Anaerobic ribonucleoside-triphosphate reductase DA68_27265 PF00171 Aldehyde dehydrogenase family DA68_27265 PF00465 Iron-containing alcohol dehydrogenase DA68_27395 PF00877 NlpC/P60 family DA68_27430 PF18840 Large polyvalent protein associated domain 25 DA68_27435 PF13342 C-terminal repeat of topoisomerase DA68_27435 PF01751 Toprim domain DA68_27435 PF01131 DNA topoisomerase DA68_27440 PF13154 Protein of unknown function (DUF3991) DA68_27455 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DA68_27455 PF18277 AbrB C-terminal domain DA68_27460 PF01494 FAD binding domain DA68_27475 PF01609 Transposase DDE domain DA68_27490 PF11756 Nitrous oxide-stimulated promoter DA68_27495 PF01381 Helix-turn-helix DA68_27510 PF00916 Sulfate permease family DA68_27510 PF01740 STAS domain DA68_27520 PF01022 Bacterial regulatory protein, arsR family DA68_27530 PF07282 Putative transposase DNA-binding domain DA68_27530 PF12323 Helix-turn-helix domain DA68_27530 PF01385 Probable transposase DA68_27555 PF17854 FtsK alpha domain DA68_27555 PF09397 Ftsk gamma domain DA68_27555 PF01580 FtsK/SpoIIIE family DA68_27565 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DA68_27565 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DA68_27570 PF00291 Pyridoxal-phosphate dependent enzyme DA68_27575 PF01609 Transposase DDE domain DA68_27585 PF00005 ABC transporter DA68_27595 PF03009 Glycerophosphoryl diester phosphodiesterase family DA68_27600 PF01316 Arginine repressor, DNA binding domain DA68_27600 PF02863 Arginine repressor, C-terminal domain DA68_27605 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DA68_27605 PF05043 Mga helix-turn-helix domain DA68_27605 PF00874 PRD domain DA68_27605 PF08279 HTH domain DA68_27610 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DA68_27610 PF02378 Phosphotransferase system, EIIC DA68_27610 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DA68_27615 PF01238 Phosphomannose isomerase type I DA68_27620 PF00324 Amino acid permease DA68_27625 PF02574 Homocysteine S-methyltransferase DA68_27630 PF01022 Bacterial regulatory protein, arsR family DA68_27640 PF03965 Penicillinase repressor DA68_27650 PF01609 Transposase DDE domain DA68_27660 PF01381 Helix-turn-helix DA68_27665 PF01609 Transposase DDE domain DA68_27670 PF13610 DDE domain DA68_27675 PF00248 Aldo/keto reductase family DA68_27680 PF00975 Thioesterase domain DA68_27680 PF00550 Phosphopantetheine attachment site DA68_27680 PF13193 AMP-binding enzyme C-terminal domain DA68_27680 PF00501 AMP-binding enzyme DA68_27680 PF00668 Condensation domain DA68_27710 PF02801 Beta-ketoacyl synthase, C-terminal domain DA68_27710 PF00109 Beta-ketoacyl synthase, N-terminal domain DA68_27710 PF14765 Polyketide synthase dehydratase DA68_27710 PF16197 Ketoacyl-synthetase C-terminal extension DA68_27710 PF00668 Condensation domain DA68_27710 PF13193 AMP-binding enzyme C-terminal domain DA68_27710 PF00501 AMP-binding enzyme DA68_27710 PF14765 Polyketide synthase dehydratase DA68_27710 PF00550 Phosphopantetheine attachment site DA68_27710 PF08659 KR domain DA68_27710 PF02801 Beta-ketoacyl synthase, C-terminal domain DA68_27710 PF00109 Beta-ketoacyl synthase, N-terminal domain DA68_27710 PF08659 KR domain DA68_27710 PF00550 Phosphopantetheine attachment site DA68_27710 PF16197 Ketoacyl-synthetase C-terminal extension DA68_27710 PF00668 Condensation domain DA68_27710 PF13193 AMP-binding enzyme C-terminal domain DA68_27710 PF00501 AMP-binding enzyme DA68_27715 PF00501 AMP-binding enzyme DA68_27715 PF13193 AMP-binding enzyme C-terminal domain DA68_27715 PF00668 Condensation domain DA68_27715 PF00550 Phosphopantetheine attachment site DA68_27715 PF00975 Thioesterase domain DA68_27720 PF00550 Phosphopantetheine attachment site DA68_27720 PF00668 Condensation domain DA68_27720 PF00501 AMP-binding enzyme DA68_27720 PF13193 AMP-binding enzyme C-terminal domain DA68_27730 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DA68_27730 PF02770 Acyl-CoA dehydrogenase, middle domain DA68_27730 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DA68_27740 PF00698 Acyl transferase domain DA68_27745 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DA68_27745 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DA68_27750 PF00550 Phosphopantetheine attachment site DA68_27755 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DA68_27755 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DA68_27755 PF02770 Acyl-CoA dehydrogenase, middle domain DA68_27760 PF00668 Condensation domain DA68_27760 PF00501 AMP-binding enzyme DA68_27760 PF00550 Phosphopantetheine attachment site DA68_27760 PF00975 Thioesterase domain DA68_27760 PF13193 AMP-binding enzyme C-terminal domain DA68_27765 PF00550 Phosphopantetheine attachment site DA68_27765 PF08659 KR domain DA68_27765 PF00668 Condensation domain DA68_27765 PF16197 Ketoacyl-synthetase C-terminal extension DA68_27765 PF00109 Beta-ketoacyl synthase, N-terminal domain DA68_27765 PF02801 Beta-ketoacyl synthase, C-terminal domain DA68_27765 PF00501 AMP-binding enzyme DA68_27765 PF14765 Polyketide synthase dehydratase DA68_27765 PF13193 AMP-binding enzyme C-terminal domain DA68_27770 PF00296 Luciferase-like monooxygenase DA68_27775 PF00005 ABC transporter DA68_27775 PF00664 ABC transporter transmembrane region DA68_27785 PF00550 Phosphopantetheine attachment site DA68_27785 PF00668 Condensation domain DA68_27785 PF00501 AMP-binding enzyme DA68_27785 PF13193 AMP-binding enzyme C-terminal domain DA68_27805 PF10668 Phage terminase small subunit DA68_27900 PF05105 Bacteriophage holin family DA68_27905 PF01510 N-acetylmuramoyl-L-alanine amidase DA68_27905 PF01476 LysM domain DA68_27905 PF01471 Putative peptidoglycan binding domain DA68_27915 PF04740 LXG domain of WXG superfamily DA68_27915 PF14436 Bacterial EndoU nuclease DA68_27925 PF11799 impB/mucB/samB family C-terminal domain DA68_27925 PF11798 IMS family HHH motif DA68_27925 PF00817 impB/mucB/samB family DA68_27955 PF13152 Protein of unknown function (DUF3967) DA68_27955 PF13411 MerR HTH family regulatory protein DA68_27980 PF13614 AAA domain DA68_28050 PF00183 Hsp90 protein DA68_28135 PF01695 IstB-like ATP binding protein DA68_28160 PF03838 Recombination protein U DA68_28225 PF01076 Plasmid recombination enzyme