DA68_00030	SM00829	Enoylreductase
DA68_00040	SM00770	Zinc dependent phospholipase C (alpha toxin)
DA68_00080	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
DA68_00090	SM00530	Helix-turn-helix XRE-family like proteins 
DA68_00140	SM00530	Helix-turn-helix XRE-family like proteins 
DA68_00235	SM00899	DA68_00235
DA68_00375	SM00116	Domain in cystathionine beta-synthase and other proteins.
DA68_00390	SM00287	Bacterial SH3 domain homologues
DA68_00400	SM00382	ATPases associated with a variety of cellular activities
DA68_00490	SM00347	helix_turn_helix multiple antibiotic resistance protein
DA68_00515	SM00382	ATPases associated with a variety of cellular activities
DA68_00550	SM00640	Glycosyl hydrolases family 32
DA68_00560	SM00354	helix_turn _helix lactose operon repressor
DA68_00630	SM00450	Rhodanese Homology Domain
DA68_00640	SM00450	Rhodanese Homology Domain
DA68_00645	SM00450	Rhodanese Homology Domain
DA68_00645	SM00849	Metallo-beta-lactamase superfamily
DA68_00660	SM00450	Rhodanese Homology Domain
DA68_00665	SM00450	Rhodanese Homology Domain
DA68_00690	SM00829	Enoylreductase
DA68_00745	SM00287	Bacterial SH3 domain homologues
DA68_00755	SM00382	ATPases associated with a variety of cellular activities
DA68_00810	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
DA68_00905	SM00344	helix_turn_helix ASNC type
DA68_00920	SM00422	helix_turn_helix, mercury resistance
DA68_00950	SM00448	cheY-homologous receiver domain
DA68_00950	SM00862	Transcriptional regulatory protein, C terminal
DA68_00955	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
DA68_00955	SM00387	Histidine kinase-like ATPases
DA68_00955	SM00388	His Kinase A (phosphoacceptor) domain
DA68_00965	SM00382	ATPases associated with a variety of cellular activities
DA68_00975	SM00382	ATPases associated with a variety of cellular activities
DA68_00985	SM00849	Metallo-beta-lactamase superfamily
DA68_01035	SM01060	DA68_01035
DA68_01065	SM00382	ATPases associated with a variety of cellular activities
DA68_01070	SM00382	ATPases associated with a variety of cellular activities
DA68_01075	SM00062	Bacterial periplasmic substrate-binding proteins
DA68_01075	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
DA68_01085	SM00382	ATPases associated with a variety of cellular activities
DA68_01155	SM00644	DA68_01155
DA68_01160	SM00729	Elongator protein 3, MiaB family, Radical SAM
DA68_01195	SM00047	Lysozyme subfamily 2
DA68_01230	SM00646	DA68_01230
DA68_01275	SM00382	ATPases associated with a variety of cellular activities
DA68_01280	SM00382	ATPases associated with a variety of cellular activities
DA68_01305	SM00849	Metallo-beta-lactamase superfamily
DA68_01425	SM00091	PAS domain
DA68_01425	SM00387	Histidine kinase-like ATPases
DA68_01430	SM00448	cheY-homologous receiver domain
DA68_01440	SM00530	Helix-turn-helix XRE-family like proteins 
DA68_01480	SM00530	Helix-turn-helix XRE-family like proteins 
DA68_01520	SM00091	PAS domain
DA68_01520	SM00382	ATPases associated with a variety of cellular activities
DA68_01565	SM00894	Excalibur calcium-binding domain
DA68_01575	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
DA68_01675	SM00347	helix_turn_helix multiple antibiotic resistance protein
DA68_01710	SM01120	DA68_01710
DA68_01735	SM00530	Helix-turn-helix XRE-family like proteins 
DA68_01740	SM00460	Transglutaminase/protease-like homologues
DA68_01815	SM00331	Sigma factor PP2C-like phosphatases
DA68_01815	SM00448	cheY-homologous receiver domain
DA68_01820	SM00138	Methyltransferase, chemotaxis proteins 
DA68_01825	SM00387	Histidine kinase-like ATPases
DA68_01825	SM00388	His Kinase A (phosphoacceptor) domain
DA68_01825	SM00448	cheY-homologous receiver domain
DA68_01855	SM00829	Enoylreductase
DA68_01890	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
DA68_01920	SM00028	Tetratricopeptide repeats
DA68_01950	SM00835	Cupin
DA68_01955	SM00530	Helix-turn-helix XRE-family like proteins 
DA68_02025	SM00347	helix_turn_helix multiple antibiotic resistance protein
DA68_02040	SM00382	ATPases associated with a variety of cellular activities
DA68_02205	SM00354	helix_turn _helix lactose operon repressor
DA68_02215	SM00849	Metallo-beta-lactamase superfamily
DA68_02330	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
DA68_02345	SM00342	helix_turn_helix, arabinose operon control protein
DA68_02345	SM00871	Bacterial transcription activator, effector binding domain
DA68_02355	SM00387	Histidine kinase-like ATPases
DA68_02355	SM00388	His Kinase A (phosphoacceptor) domain
DA68_02360	SM00448	cheY-homologous receiver domain
DA68_02360	SM00862	Transcriptional regulatory protein, C terminal
DA68_02385	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
DA68_02385	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
DA68_02420	SM00357	Cold shock protein domain
DA68_02535	SM01060	DA68_02535
DA68_02545	SM00642	Alpha-amylase domain
DA68_02555	SM00316	Ribosomal protein S1-like RNA-binding domain
DA68_02590	SM00382	ATPases associated with a variety of cellular activities
DA68_02590	SM01086	C-terminal, D2-small domain, of ClpB protein
DA68_02620	SM00825	Beta-ketoacyl synthase
DA68_02665	SM00382	ATPases associated with a variety of cellular activities
DA68_02670	SM00382	ATPases associated with a variety of cellular activities
DA68_02705	SM00155	Phospholipase D. Active site motifs.
DA68_02730	SM01118	DA68_02730
DA68_02740	SM00954	Region found in RelA / SpoT proteins
DA68_02895	SM00635	Bacterial Ig-like domain 2
DA68_02965	SM01324	DA68_02965
DA68_03005	SM00861	Transketolase, pyrimidine binding domain
DA68_03010	SM00530	Helix-turn-helix XRE-family like proteins 
DA68_03085	SM00530	Helix-turn-helix XRE-family like proteins 
DA68_03105	SM00382	ATPases associated with a variety of cellular activities
DA68_03125	SM00014	Acid phosphatase homologues
DA68_03175	SM00448	cheY-homologous receiver domain
DA68_03175	SM00862	Transcriptional regulatory protein, C terminal
DA68_03180	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
DA68_03180	SM00387	Histidine kinase-like ATPases
DA68_03180	SM00388	His Kinase A (phosphoacceptor) domain
DA68_03185	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DA68_03185	SM00895	DA68_03185
DA68_03255	SM00822	DA68_03255
DA68_03290	SM00382	ATPases associated with a variety of cellular activities
DA68_03315	SM00420	helix_turn_helix, Deoxyribose operon repressor
DA68_03315	SM01134	DA68_03315
DA68_03325	SM00365	Leucine-rich repeat, SDS22-like subfamily
DA68_03325	SM00369	Leucine-rich repeats, typical (most populated) subfamily
DA68_03325	SM00725	NEAr Transporter domain
DA68_03330	SM01007	Class II Aldolase and Adducin N-terminal domain
DA68_03350	SM00387	Histidine kinase-like ATPases
DA68_03350	SM00388	His Kinase A (phosphoacceptor) domain
DA68_03355	SM00347	helix_turn_helix multiple antibiotic resistance protein
DA68_03375	SM00387	Histidine kinase-like ATPases
DA68_03375	SM00388	His Kinase A (phosphoacceptor) domain
DA68_03445	SM00465	GIY-YIG type nucleases (URI domain)
DA68_03455	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DA68_03460	SM00382	ATPases associated with a variety of cellular activities
DA68_03470	SM00382	ATPases associated with a variety of cellular activities
DA68_03490	SM00344	helix_turn_helix ASNC type
DA68_03605	SM00347	helix_turn_helix multiple antibiotic resistance protein
DA68_03670	SM00917	LeuA allosteric (dimerisation) domain
DA68_03675	SM01329	DA68_03675
DA68_03855	SM00387	Histidine kinase-like ATPases
DA68_03860	SM00421	helix_turn_helix, Lux Regulon
DA68_03860	SM00448	cheY-homologous receiver domain
DA68_03950	SM00091	PAS domain
DA68_03950	SM00387	Histidine kinase-like ATPases
DA68_03950	SM00388	His Kinase A (phosphoacceptor) domain
DA68_03970	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
DA68_03970	SM00387	Histidine kinase-like ATPases
DA68_03970	SM00388	His Kinase A (phosphoacceptor) domain
DA68_04020	SM00363	S4 RNA-binding domain
DA68_04040	SM00448	cheY-homologous receiver domain
DA68_04040	SM00862	Transcriptional regulatory protein, C terminal
DA68_04045	SM00091	PAS domain
DA68_04045	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
DA68_04045	SM00387	Histidine kinase-like ATPases
DA68_04045	SM00388	His Kinase A (phosphoacceptor) domain
DA68_04055	SM00257	Lysin motif
DA68_04080	SM00487	DEAD-like helicases superfamily
DA68_04080	SM00490	helicase superfamily c-terminal domain
DA68_04090	SM00257	Lysin motif
DA68_04100	SM00422	helix_turn_helix, mercury resistance
DA68_04110	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
DA68_04125	SM00644	DA68_04125
DA68_04135	SM00870	DA68_04135
DA68_04145	SM00316	Ribosomal protein S1-like RNA-binding domain
DA68_04150	SM01240	DA68_04150
DA68_04205	SM00411	bacterial (prokaryotic) histone like domain
DA68_04230	SM00562	DA68_04230
DA68_04250	SM00028	Tetratricopeptide repeats
DA68_04255	SM00914	DA68_04255
DA68_04300	SM00986	Uracil DNA glycosylase superfamily
DA68_04300	SM00987	UreE urease accessory protein, C-terminal domain 
DA68_04320	SM00851	MGS-like domain
DA68_04365	SM00479	DA68_04365
DA68_04365	SM00487	DEAD-like helicases superfamily
DA68_04365	SM00491	DA68_04365
DA68_04390	SM00478	endonuclease III
DA68_04400	SM00060	Fibronectin type 3 domain
DA68_04455	SM00981	DA68_04455
DA68_04465	SM00491	DA68_04465
DA68_04520	SM00450	Rhodanese Homology Domain
DA68_04560	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
DA68_04560	SM00475	5'-3' exonuclease
DA68_04670	SM00357	Cold shock protein domain
DA68_04720	SM00849	Metallo-beta-lactamase superfamily
DA68_04725	SM00422	helix_turn_helix, mercury resistance
DA68_04725	SM00871	Bacterial transcription activator, effector binding domain
DA68_04800	SM00448	cheY-homologous receiver domain
DA68_04805	SM00073	Histidine Phosphotransfer domain
DA68_04805	SM00260	Two component signalling adaptor domain
DA68_04805	SM00387	Histidine kinase-like ATPases
DA68_04805	SM01231	DA68_04805
DA68_04825	SM00138	Methyltransferase, chemotaxis proteins 
DA68_04900	SM00382	ATPases associated with a variety of cellular activities
DA68_04935	SM00260	Two component signalling adaptor domain
DA68_04935	SM00448	cheY-homologous receiver domain
DA68_05005	SM00382	ATPases associated with a variety of cellular activities
DA68_05005	SM00962	SRP54-type protein, GTPase domain
DA68_05015	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
DA68_05060	SM00530	Helix-turn-helix XRE-family like proteins 
DA68_05080	SM00382	ATPases associated with a variety of cellular activities
DA68_05095	SM00849	Metallo-beta-lactamase superfamily
DA68_05095	SM01027	Beta-Casp domain
DA68_05120	SM00855	Phosphoglycerate mutase family
DA68_05140	SM00347	helix_turn_helix multiple antibiotic resistance protein
DA68_05180	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DA68_05180	SM00895	DA68_05180
DA68_05195	SM00833	Cobalamin synthesis protein cobW C-terminal domain
DA68_05220	SM00422	helix_turn_helix, mercury resistance
DA68_05290	SM00530	Helix-turn-helix XRE-family like proteins 
DA68_05325	SM00421	helix_turn_helix, Lux Regulon
DA68_05325	SM00448	cheY-homologous receiver domain
DA68_05335	SM00382	ATPases associated with a variety of cellular activities
DA68_05355	SM00155	Phospholipase D. Active site motifs.
DA68_05375	SM00919	Malic enzyme, NAD binding domain
DA68_05375	SM01274	DA68_05375
DA68_05380	SM00387	Histidine kinase-like ATPases
DA68_05385	SM00448	cheY-homologous receiver domain
DA68_05390	SM00487	DEAD-like helicases superfamily
DA68_05390	SM00490	helicase superfamily c-terminal domain
DA68_05580	SM00854	Bacterial capsule synthesis protein PGA_cap
DA68_05610	SM00850	LytTr DNA-binding domain
DA68_05645	SM00448	cheY-homologous receiver domain
DA68_05645	SM00862	Transcriptional regulatory protein, C terminal
DA68_05650	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
DA68_05650	SM00387	Histidine kinase-like ATPases
DA68_05650	SM00388	His Kinase A (phosphoacceptor) domain
DA68_05665	SM00450	Rhodanese Homology Domain
DA68_05730	SM01133	DA68_05730
DA68_05775	SM01011	Aminopeptidase P, N-terminal domain
DA68_05795	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
DA68_05795	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
DA68_05795	SM00493	DA68_05795
DA68_05885	SM00833	Cobalamin synthesis protein cobW C-terminal domain
DA68_05895	SM00382	ATPases associated with a variety of cellular activities
DA68_05900	SM00382	ATPases associated with a variety of cellular activities
DA68_05935	SM00347	helix_turn_helix multiple antibiotic resistance protein
DA68_05955	SM00382	ATPases associated with a variety of cellular activities
DA68_05960	SM00382	ATPases associated with a variety of cellular activities
DA68_06025	SM00287	Bacterial SH3 domain homologues
DA68_06035	SM00382	ATPases associated with a variety of cellular activities
DA68_06040	SM00448	cheY-homologous receiver domain
DA68_06040	SM00862	Transcriptional regulatory protein, C terminal
DA68_06045	SM00387	Histidine kinase-like ATPases
DA68_06045	SM00388	His Kinase A (phosphoacceptor) domain
DA68_06115	SM00448	cheY-homologous receiver domain
DA68_06115	SM00862	Transcriptional regulatory protein, C terminal
DA68_06120	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
DA68_06120	SM00387	Histidine kinase-like ATPases
DA68_06120	SM00388	His Kinase A (phosphoacceptor) domain
DA68_06190	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DA68_06215	SM00460	Transglutaminase/protease-like homologues
DA68_06240	SM00966	SpoVT / AbrB like domain 
DA68_06250	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
DA68_06290	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
DA68_06290	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
DA68_06355	SM00833	Cobalamin synthesis protein cobW C-terminal domain
DA68_06405	SM00855	Phosphoglycerate mutase family
DA68_06455	SM00155	Phospholipase D. Active site motifs.
DA68_06480	SM01091	Transporter associated domain
DA68_06550	SM00244	prohibitin homologues
DA68_06560	SM00855	Phosphoglycerate mutase family
DA68_06580	SM01005	Alanine racemase, C-terminal domain
DA68_06605	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DA68_06765	SM01040	BRO family, N-terminal domain
DA68_06875	SM00487	DEAD-like helicases superfamily
DA68_06875	SM00490	helicase superfamily c-terminal domain
DA68_06895	SM00829	Enoylreductase
DA68_06915	SM00849	Metallo-beta-lactamase superfamily
DA68_06930	SM00460	Transglutaminase/protease-like homologues
DA68_06955	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
DA68_06975	SM00100	Cyclic nucleotide-monophosphate binding domain
DA68_06975	SM00419	helix_turn_helix, cAMP Regulatory protein
DA68_06980	SM00729	Elongator protein 3, MiaB family, Radical SAM
DA68_06990	SM00852	Probable molybdopterin binding domain
DA68_07050	SM00894	Excalibur calcium-binding domain
DA68_07095	SM00028	Tetratricopeptide repeats
DA68_07110	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
DA68_07115	SM00382	ATPases associated with a variety of cellular activities
DA68_07140	SM00567	E-Z type HEAT repeats
DA68_07140	SM00932	Scaffold protein Nfu/NifU N terminal
DA68_07160	SM00836	DALR anticodon binding domain
DA68_07160	SM01016	Arginyl tRNA synthetase N terminal dom
DA68_07175	SM00028	Tetratricopeptide repeats
DA68_07255	SM00530	Helix-turn-helix XRE-family like proteins 
DA68_07315	SM00563	Phosphate acyltransferases
DA68_07375	SM00646	DA68_07375
DA68_07420	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
DA68_07425	SM00421	helix_turn_helix, Lux Regulon
DA68_07425	SM00448	cheY-homologous receiver domain
DA68_07440	SM00829	Enoylreductase
DA68_07465	SM01350	DA68_07465
DA68_07500	SM00382	ATPases associated with a variety of cellular activities
DA68_07540	SM01091	Transporter associated domain
DA68_07555	SM00387	Histidine kinase-like ATPases
DA68_07555	SM00388	His Kinase A (phosphoacceptor) domain
DA68_07570	SM00882	Coenzyme A transferase
DA68_07575	SM00882	Coenzyme A transferase
DA68_07590	SM00382	ATPases associated with a variety of cellular activities
DA68_07625	SM00219	Tyrosine kinase, catalytic domain
DA68_07635	SM00014	Acid phosphatase homologues
DA68_07820	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
DA68_07835	SM00822	DA68_07835
DA68_07855	SM00823	Phosphopantetheine attachment site
DA68_07855	SM00824	Thioesterase
DA68_07860	SM00923	MbtH-like protein
DA68_07880	SM00411	bacterial (prokaryotic) histone like domain
DA68_07920	SM00363	S4 RNA-binding domain
DA68_07925	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
DA68_07930	SM00382	ATPases associated with a variety of cellular activities
DA68_07955	SM00849	Metallo-beta-lactamase superfamily
DA68_07980	SM00100	Cyclic nucleotide-monophosphate binding domain
DA68_08000	SM00849	Metallo-beta-lactamase superfamily
DA68_08020	SM01059	Chloramphenicol acetyltransferase
DA68_08045	SM00530	Helix-turn-helix XRE-family like proteins 
DA68_08080	SM00357	Cold shock protein domain
DA68_08105	SM00859	Semialdehyde dehydrogenase, NAD binding domain
DA68_08140	SM00382	ATPases associated with a variety of cellular activities
DA68_08145	SM00382	ATPases associated with a variety of cellular activities
DA68_08185	SM00835	Cupin
DA68_08255	SM01207	DA68_08255
DA68_08270	SM00347	helix_turn_helix multiple antibiotic resistance protein
DA68_08285	SM00849	Metallo-beta-lactamase superfamily
DA68_08290	SM00487	DEAD-like helicases superfamily
DA68_08290	SM00490	helicase superfamily c-terminal domain
DA68_08395	SM00347	helix_turn_helix multiple antibiotic resistance protein
DA68_08400	SM00855	Phosphoglycerate mutase family
DA68_08440	SM00421	helix_turn_helix, Lux Regulon
DA68_08445	SM00530	Helix-turn-helix XRE-family like proteins 
DA68_08450	SM00966	SpoVT / AbrB like domain 
DA68_08470	SM00936	Penicillin-binding protein 5, C-terminal domain 
DA68_08490	SM00823	Phosphopantetheine attachment site
DA68_08495	SM00823	Phosphopantetheine attachment site
DA68_08565	SM00047	Lysozyme subfamily 2
DA68_08665	SM00116	Domain in cystathionine beta-synthase and other proteins.
DA68_08665	SM00924	MgtE intracellular N domain
DA68_08715	SM00382	ATPases associated with a variety of cellular activities
DA68_08745	SM00878	Biotin carboxylase C-terminal domain
DA68_08805	SM00387	Histidine kinase-like ATPases
DA68_08805	SM00388	His Kinase A (phosphoacceptor) domain
DA68_08810	SM00448	cheY-homologous receiver domain
DA68_08810	SM00862	Transcriptional regulatory protein, C terminal
DA68_08815	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
DA68_08845	SM00342	helix_turn_helix, arabinose operon control protein
DA68_08875	SM00382	ATPases associated with a variety of cellular activities
DA68_08880	SM00422	helix_turn_helix, mercury resistance
DA68_08880	SM00871	Bacterial transcription activator, effector binding domain
DA68_08920	SM00342	helix_turn_helix, arabinose operon control protein
DA68_08935	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DA68_09000	SM00448	cheY-homologous receiver domain
DA68_09000	SM00862	Transcriptional regulatory protein, C terminal
DA68_09005	SM00387	Histidine kinase-like ATPases
DA68_09010	SM00382	ATPases associated with a variety of cellular activities
DA68_09020	SM00382	ATPases associated with a variety of cellular activities
DA68_09050	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DA68_09055	SM01209	DA68_09055
DA68_09160	SM00091	PAS domain
DA68_09160	SM00387	Histidine kinase-like ATPases
DA68_09160	SM00388	His Kinase A (phosphoacceptor) domain
DA68_09190	SM00382	ATPases associated with a variety of cellular activities
DA68_09200	SM00387	Histidine kinase-like ATPases
DA68_09200	SM00388	His Kinase A (phosphoacceptor) domain
DA68_09240	SM00829	Enoylreductase
DA68_09245	SM00014	Acid phosphatase homologues
DA68_09250	SM00740	DA68_09250
DA68_09290	SM00422	helix_turn_helix, mercury resistance
DA68_09320	SM00287	Bacterial SH3 domain homologues
DA68_09335	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DA68_09405	SM00480	DNA polymerase III beta subunit
DA68_09490	SM00465	GIY-YIG type nucleases (URI domain)
DA68_09560	SM00448	cheY-homologous receiver domain
DA68_09560	SM00862	Transcriptional regulatory protein, C terminal
DA68_09565	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
DA68_09565	SM00387	Histidine kinase-like ATPases
DA68_09565	SM00388	His Kinase A (phosphoacceptor) domain
DA68_09580	SM00382	ATPases associated with a variety of cellular activities
DA68_09615	SM00642	Alpha-amylase domain
DA68_09655	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DA68_09775	SM00382	ATPases associated with a variety of cellular activities
DA68_09790	SM00420	helix_turn_helix, Deoxyribose operon repressor
DA68_09790	SM01134	DA68_09790
DA68_09830	SM00861	Transketolase, pyrimidine binding domain
DA68_09885	SM00116	Domain in cystathionine beta-synthase and other proteins.
DA68_09885	SM00382	ATPases associated with a variety of cellular activities
DA68_09920	SM00060	Fibronectin type 3 domain
DA68_10015	SM00341	Helicase and RNase D C-terminal
DA68_10015	SM00487	DEAD-like helicases superfamily
DA68_10015	SM00490	helicase superfamily c-terminal domain
DA68_10015	SM00956	DA68_10015
DA68_10035	SM00646	DA68_10035
DA68_10050	SM01131	DA68_10050
DA68_10090	SM01130	DA68_10090
DA68_10110	SM00091	PAS domain
DA68_10110	SM00382	ATPases associated with a variety of cellular activities
DA68_10185	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
DA68_10210	SM00248	ankyrin repeats
DA68_10235	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
DA68_10245	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
DA68_10245	SM00387	Histidine kinase-like ATPases
DA68_10245	SM00388	His Kinase A (phosphoacceptor) domain
DA68_10250	SM00448	cheY-homologous receiver domain
DA68_10250	SM00862	Transcriptional regulatory protein, C terminal
DA68_10460	SM00382	ATPases associated with a variety of cellular activities
DA68_10465	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DA68_10525	SM00062	Bacterial periplasmic substrate-binding proteins
DA68_10530	SM00382	ATPases associated with a variety of cellular activities
DA68_10545	SM00028	Tetratricopeptide repeats
DA68_10625	SM00382	ATPases associated with a variety of cellular activities
DA68_10665	SM00830	Chorismate mutase type II
DA68_10700	SM00860	SMI1 / KNR4 family
DA68_10705	SM00287	Bacterial SH3 domain homologues
DA68_10760	SM00382	ATPases associated with a variety of cellular activities
DA68_10780	SM01133	DA68_10780
DA68_10795	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
DA68_10815	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
DA68_10830	SM00346	helix_turn_helix isocitrate lyase regulation
DA68_10860	SM00098	Alkaline phosphatase homologues
DA68_10870	SM00530	Helix-turn-helix XRE-family like proteins 
DA68_10980	SM01060	DA68_10980
DA68_11020	SM00382	ATPases associated with a variety of cellular activities
DA68_11050	SM00860	SMI1 / KNR4 family
DA68_11080	SM00347	helix_turn_helix multiple antibiotic resistance protein
DA68_11085	SM00889	Elongation factor G, domain IV
DA68_11100	SM00773	Proposed nucleic acid binding domain
DA68_11105	SM00860	SMI1 / KNR4 family
DA68_11115	SM00382	ATPases associated with a variety of cellular activities
DA68_11140	SM00342	helix_turn_helix, arabinose operon control protein
DA68_11140	SM00871	Bacterial transcription activator, effector binding domain
DA68_11170	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DA68_11305	SM00797	Allophanate hydrolase subunit 2
DA68_11310	SM00796	Allophanate hydrolase subunit 1
DA68_11315	SM00346	helix_turn_helix isocitrate lyase regulation
DA68_11330	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
DA68_11410	SM00849	Metallo-beta-lactamase superfamily
DA68_11445	SM00870	DA68_11445
DA68_11450	SM00530	Helix-turn-helix XRE-family like proteins 
DA68_11470	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
DA68_11470	SM00091	PAS domain
DA68_11470	SM00387	Histidine kinase-like ATPases
DA68_11470	SM00388	His Kinase A (phosphoacceptor) domain
DA68_11495	SM00342	helix_turn_helix, arabinose operon control protein
DA68_11510	SM00465	GIY-YIG type nucleases (URI domain)
DA68_11540	SM00448	cheY-homologous receiver domain
DA68_11545	SM00387	Histidine kinase-like ATPases
DA68_11620	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
DA68_11690	SM00347	helix_turn_helix multiple antibiotic resistance protein
DA68_11700	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
DA68_11700	SM00387	Histidine kinase-like ATPases
DA68_11700	SM00388	His Kinase A (phosphoacceptor) domain
DA68_11705	SM00448	cheY-homologous receiver domain
DA68_11705	SM00862	Transcriptional regulatory protein, C terminal
DA68_11800	SM00226	Low molecular weight phosphatase family
DA68_11815	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
DA68_11875	SM00347	helix_turn_helix multiple antibiotic resistance protein
DA68_11915	SM00421	helix_turn_helix, Lux Regulon
DA68_11915	SM00448	cheY-homologous receiver domain
DA68_11925	SM00382	ATPases associated with a variety of cellular activities
DA68_11930	SM00387	Histidine kinase-like ATPases
DA68_11930	SM00388	His Kinase A (phosphoacceptor) domain
DA68_11935	SM00448	cheY-homologous receiver domain
DA68_11935	SM00862	Transcriptional regulatory protein, C terminal
DA68_12005	SM00382	ATPases associated with a variety of cellular activities
DA68_12015	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
DA68_12025	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
DA68_12025	SM00387	Histidine kinase-like ATPases
DA68_12025	SM00388	His Kinase A (phosphoacceptor) domain
DA68_12030	SM00448	cheY-homologous receiver domain
DA68_12030	SM00862	Transcriptional regulatory protein, C terminal
DA68_12100	SM00644	DA68_12100
DA68_12220	SM00854	Bacterial capsule synthesis protein PGA_cap
DA68_12245	SM00347	helix_turn_helix multiple antibiotic resistance protein
DA68_12300	SM00382	ATPases associated with a variety of cellular activities
DA68_12415	SM00382	ATPases associated with a variety of cellular activities
DA68_12430	SM00530	Helix-turn-helix XRE-family like proteins 
DA68_12510	SM00028	Tetratricopeptide repeats
DA68_12535	SM01091	Transporter associated domain
DA68_12540	SM00422	helix_turn_helix, mercury resistance
DA68_12615	SM01350	DA68_12615
DA68_12620	SM00861	Transketolase, pyrimidine binding domain
DA68_12630	SM00829	Enoylreductase
DA68_12640	SM01276	DA68_12640
DA68_12645	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
DA68_12645	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
DA68_12690	SM00914	DA68_12690
DA68_12710	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DA68_12710	SM00866	DA68_12710
DA68_12735	SM00849	Metallo-beta-lactamase superfamily
DA68_12780	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
DA68_12785	SM00636	DA68_12785
DA68_12825	SM00871	Bacterial transcription activator, effector binding domain
DA68_12830	SM00420	helix_turn_helix, Deoxyribose operon repressor
DA68_12840	SM00382	ATPases associated with a variety of cellular activities
DA68_12860	SM00849	Metallo-beta-lactamase superfamily
DA68_12865	SM00641	Glycosyl hydrolases family 25
DA68_12920	SM00849	Metallo-beta-lactamase superfamily
DA68_13030	SM00829	Enoylreductase
DA68_13045	SM00855	Phosphoglycerate mutase family
DA68_13055	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
DA68_13055	SM00534	ATPase domain of DNA mismatch repair MUTS family
DA68_13065	SM00642	Alpha-amylase domain
DA68_13085	SM00422	helix_turn_helix, mercury resistance
DA68_13085	SM00871	Bacterial transcription activator, effector binding domain
DA68_13140	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
DA68_13145	SM00829	Enoylreductase
DA68_13155	SM00028	Tetratricopeptide repeats
DA68_13205	SM00450	Rhodanese Homology Domain
DA68_13205	SM00849	Metallo-beta-lactamase superfamily
DA68_13220	SM00148	Phospholipase C, catalytic domain (part); domain X
DA68_13225	SM00060	Fibronectin type 3 domain
DA68_13225	SM00495	Chitin-binding domain type 3
DA68_13275	SM00028	Tetratricopeptide repeats
DA68_13285	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
DA68_13285	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
DA68_13285	SM00319	Homologues of the ligand binding domain of Tar
DA68_13315	SM00060	Fibronectin type 3 domain
DA68_13315	SM00495	Chitin-binding domain type 3
DA68_13315	SM01276	DA68_13315
DA68_13430	SM00257	Lysin motif
DA68_13545	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
DA68_13615	SM00387	Histidine kinase-like ATPases
DA68_13615	SM00388	His Kinase A (phosphoacceptor) domain
DA68_13620	SM00387	Histidine kinase-like ATPases
DA68_13620	SM00388	His Kinase A (phosphoacceptor) domain
DA68_13625	SM00448	cheY-homologous receiver domain
DA68_13625	SM00862	Transcriptional regulatory protein, C terminal
DA68_13680	SM00644	DA68_13680
DA68_13735	SM00052	Putative diguanylate phosphodiesterase
DA68_13735	SM00091	PAS domain
DA68_13735	SM00267	diguanylate cyclase
DA68_13740	SM00382	ATPases associated with a variety of cellular activities
DA68_13770	SM00387	Histidine kinase-like ATPases
DA68_13770	SM00388	His Kinase A (phosphoacceptor) domain
DA68_13775	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
DA68_13815	SM00479	DA68_13815
DA68_13820	SM00357	Cold shock protein domain
DA68_13845	SM01022	DA68_13845
DA68_13900	SM00822	DA68_13900
DA68_13955	SM00852	Probable molybdopterin binding domain
DA68_13970	SM00729	Elongator protein 3, MiaB family, Radical SAM
DA68_13990	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
DA68_13990	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
DA68_14085	SM00382	ATPases associated with a variety of cellular activities
DA68_14100	SM00434	DNA Topoisomerase IV
DA68_14105	SM00387	Histidine kinase-like ATPases
DA68_14105	SM00433	TopoisomeraseII
DA68_14110	SM00881	CoA binding domain
DA68_14115	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
DA68_14120	SM00448	cheY-homologous receiver domain
DA68_14120	SM00862	Transcriptional regulatory protein, C terminal
DA68_14135	SM01207	DA68_14135
DA68_14150	SM00257	Lysin motif
DA68_14150	SM00636	DA68_14150
DA68_14170	SM00479	DA68_14170
DA68_14185	SM00382	ATPases associated with a variety of cellular activities
DA68_14230	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
DA68_14275	SM00530	Helix-turn-helix XRE-family like proteins 
DA68_14305	SM00644	DA68_14305
DA68_14305	SM00701	Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme.
DA68_14310	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
DA68_14325	SM00091	PAS domain
DA68_14325	SM00387	Histidine kinase-like ATPases
DA68_14325	SM00388	His Kinase A (phosphoacceptor) domain
DA68_14360	SM01058	CarD-like/TRCF domain
DA68_14440	SM00382	ATPases associated with a variety of cellular activities
DA68_14500	SM00287	Bacterial SH3 domain homologues
DA68_14500	SM00641	Glycosyl hydrolases family 25
DA68_14505	SM00382	ATPases associated with a variety of cellular activities
DA68_14510	SM00382	ATPases associated with a variety of cellular activities
DA68_14525	SM00861	Transketolase, pyrimidine binding domain
DA68_14540	SM00382	ATPases associated with a variety of cellular activities
DA68_14545	SM00062	Bacterial periplasmic substrate-binding proteins
DA68_14560	SM00857	Resolvase, N terminal domain
DA68_14585	SM01230	DA68_14585
DA68_14590	SM00422	helix_turn_helix, mercury resistance
DA68_14615	SM00382	ATPases associated with a variety of cellular activities
DA68_14645	SM00287	Bacterial SH3 domain homologues
DA68_14660	SM00420	helix_turn_helix, Deoxyribose operon repressor
DA68_14660	SM01134	DA68_14660
DA68_14690	SM00636	DA68_14690
DA68_14705	SM00411	bacterial (prokaryotic) histone like domain
DA68_14745	SM00382	ATPases associated with a variety of cellular activities
DA68_14765	SM00342	helix_turn_helix, arabinose operon control protein
DA68_14775	SM00478	endonuclease III
DA68_14805	SM00052	Putative diguanylate phosphodiesterase
DA68_14805	SM00091	PAS domain
DA68_14805	SM00267	diguanylate cyclase
DA68_14850	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DA68_14860	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DA68_14860	SM00866	DA68_14860
DA68_14870	SM00148	Phospholipase C, catalytic domain (part); domain X
DA68_14880	SM00257	Lysin motif
DA68_14905	SM00853	MutL C terminal dimerisation domain
DA68_14905	SM01340	DA68_14905
DA68_14910	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
DA68_14910	SM00534	ATPase domain of DNA mismatch repair MUTS family
DA68_14925	SM00729	Elongator protein 3, MiaB family, Radical SAM
DA68_14955	SM00322	K homology RNA-binding domain
DA68_14955	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
DA68_14970	SM00852	Probable molybdopterin binding domain
DA68_15020	SM00382	ATPases associated with a variety of cellular activities
DA68_15030	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DA68_15030	SM00866	DA68_15030
DA68_15035	SM00382	ATPases associated with a variety of cellular activities
DA68_15035	SM00843	DA68_15035
DA68_15050	SM00849	Metallo-beta-lactamase superfamily
DA68_15055	SM01130	DA68_15055
DA68_15065	SM00859	Semialdehyde dehydrogenase, NAD binding domain
DA68_15095	SM00316	Ribosomal protein S1-like RNA-binding domain
DA68_15095	SM00322	K homology RNA-binding domain
DA68_15100	SM01387	DA68_15100
DA68_15105	SM00904	Riboflavin kinase
DA68_15140	SM00316	Ribosomal protein S1-like RNA-binding domain
DA68_15140	SM00322	K homology RNA-binding domain
DA68_15150	SM00479	DA68_15150
DA68_15150	SM00481	DNA polymerase alpha chain like domain
DA68_15160	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
DA68_15205	SM00382	ATPases associated with a variety of cellular activities
DA68_15205	SM01086	C-terminal, D2-small domain, of ClpB protein
DA68_15225	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
DA68_15225	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
DA68_15225	SM00493	DA68_15225
DA68_15235	SM00881	CoA binding domain
DA68_15285	SM00382	ATPases associated with a variety of cellular activities
DA68_15285	SM00962	SRP54-type protein, GTPase domain
DA68_15285	SM00963	SRP54-type protein, helical bundle domain
DA68_15295	SM00382	ATPases associated with a variety of cellular activities
DA68_15295	SM00962	SRP54-type protein, GTPase domain
DA68_15295	SM00963	SRP54-type protein, helical bundle domain
DA68_15300	SM00968	SMC proteins Flexible Hinge Domain
DA68_15305	SM00358	Double-stranded RNA binding motif
DA68_15305	SM00535	Ribonuclease III family
DA68_15315	SM00822	DA68_15315
DA68_15320	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
DA68_15335	SM00487	DEAD-like helicases superfamily
DA68_15335	SM00490	helicase superfamily c-terminal domain
DA68_15340	SM01120	DA68_15340
DA68_15340	SM01121	DA68_15340
DA68_15360	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
DA68_15375	SM00220	Serine/Threonine protein kinases, catalytic domain
DA68_15375	SM00740	DA68_15375
DA68_15380	SM00331	Sigma factor PP2C-like phosphatases
DA68_15380	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
DA68_15405	SM00487	DEAD-like helicases superfamily
DA68_15405	SM00490	helicase superfamily c-terminal domain
DA68_15415	SM01409	DA68_15415
DA68_15420	SM00072	Guanylate kinase homologues.
DA68_15435	SM00831	Cation transporter/ATPase, N-terminus
DA68_15485	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
DA68_15500	SM00851	MGS-like domain
DA68_15500	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
DA68_15500	SM01209	DA68_15500
DA68_15505	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
DA68_15530	SM00363	S4 RNA-binding domain
DA68_15555	SM00363	S4 RNA-binding domain
DA68_15600	SM00864	Tubulin/FtsZ family, GTPase domain
DA68_15600	SM00865	Tubulin/FtsZ family, C-terminal domain
DA68_15605	SM00842	Cell division protein FtsA
DA68_15645	SM00740	DA68_15645
DA68_15650	SM00740	DA68_15650
DA68_15680	SM00717	SANT  SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
DA68_15700	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
DA68_15740	SM00855	Phosphoglycerate mutase family
DA68_15805	SM00878	Biotin carboxylase C-terminal domain
DA68_15825	SM00670	Large family of predicted nucleotide-binding domains
DA68_15850	SM00838	Elongation factor G C-terminus
DA68_15930	SM00861	Transketolase, pyrimidine binding domain
DA68_15960	SM00849	Metallo-beta-lactamase superfamily
DA68_16025	SM00052	Putative diguanylate phosphodiesterase
DA68_16110	SM00387	Histidine kinase-like ATPases
DA68_16110	SM00388	His Kinase A (phosphoacceptor) domain
DA68_16125	SM00354	helix_turn _helix lactose operon repressor
DA68_16145	SM00642	Alpha-amylase domain
DA68_16150	SM00642	Alpha-amylase domain
DA68_16155	SM00382	ATPases associated with a variety of cellular activities
DA68_16190	SM00382	ATPases associated with a variety of cellular activities
DA68_16270	SM01007	Class II Aldolase and Adducin N-terminal domain
DA68_16300	SM00267	diguanylate cyclase
DA68_16335	SM01061	CAT RNA binding domain
DA68_16345	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DA68_16345	SM00866	DA68_16345
DA68_16360	SM00849	Metallo-beta-lactamase superfamily
DA68_16455	SM00387	Histidine kinase-like ATPases
DA68_16465	SM00936	Penicillin-binding protein 5, C-terminal domain 
DA68_16470	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DA68_16475	SM00382	ATPases associated with a variety of cellular activities
DA68_16495	SM00347	helix_turn_helix multiple antibiotic resistance protein
DA68_16515	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
DA68_16610	SM00354	helix_turn _helix lactose operon repressor
DA68_16630	SM00704	CDGSH-type zinc finger. Function unknown.
DA68_16660	SM00729	Elongator protein 3, MiaB family, Radical SAM
DA68_16660	SM00876	Biotin and Thiamin Synthesis associated domain
DA68_16710	SM00347	helix_turn_helix multiple antibiotic resistance protein
DA68_16745	SM00859	Semialdehyde dehydrogenase, NAD binding domain
DA68_16760	SM00849	Metallo-beta-lactamase superfamily
DA68_16780	SM00849	Metallo-beta-lactamase superfamily
DA68_16795	SM00831	Cation transporter/ATPase, N-terminus
DA68_16830	SM00382	ATPases associated with a variety of cellular activities
DA68_16840	SM00062	Bacterial periplasmic substrate-binding proteins
DA68_16840	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
DA68_16875	SM00861	Transketolase, pyrimidine binding domain
DA68_16895	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
DA68_16905	SM00091	PAS domain
DA68_16905	SM00382	ATPases associated with a variety of cellular activities
DA68_16930	SM00448	cheY-homologous receiver domain
DA68_16935	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
DA68_16950	SM00363	S4 RNA-binding domain
DA68_16955	SM00861	Transketolase, pyrimidine binding domain
DA68_16990	SM00878	Biotin carboxylase C-terminal domain
DA68_17035	SM00382	ATPases associated with a variety of cellular activities
DA68_17055	SM00841	Elongation factor P, C-terminal
DA68_17055	SM01185	DA68_17055
DA68_17090	SM00529	Helix-turn-helix diphteria tox regulatory element
DA68_17115	SM00450	Rhodanese Homology Domain
DA68_17125	SM00354	helix_turn _helix lactose operon repressor
DA68_17170	SM00382	ATPases associated with a variety of cellular activities
DA68_17175	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DA68_17205	SM00487	DEAD-like helicases superfamily
DA68_17205	SM00490	helicase superfamily c-terminal domain
DA68_17240	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
DA68_17330	SM01018	B12 binding domain
DA68_17355	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
DA68_17365	SM00849	Metallo-beta-lactamase superfamily
DA68_17400	SM00382	ATPases associated with a variety of cellular activities
DA68_17465	SM00382	ATPases associated with a variety of cellular activities
DA68_17480	SM00518	AP endonuclease family 2
DA68_17485	SM00487	DEAD-like helicases superfamily
DA68_17485	SM00490	helicase superfamily c-terminal domain
DA68_17520	SM00400	zinc finger
DA68_17520	SM00493	DA68_17520
DA68_17520	SM00766	DNA primase DnaG DnaB-binding
DA68_17530	SM00116	Domain in cystathionine beta-synthase and other proteins.
DA68_17565	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
DA68_17595	SM00729	Elongator protein 3, MiaB family, Radical SAM
DA68_17610	SM00271	DnaJ molecular chaperone homology domain
DA68_17630	SM00729	Elongator protein 3, MiaB family, Radical SAM
DA68_17640	SM00838	Elongation factor G C-terminus
DA68_17670	SM00849	Metallo-beta-lactamase superfamily
DA68_17680	SM00278	Helix-hairpin-helix DNA-binding motif class 1
DA68_17700	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
DA68_17710	SM01103	DA68_17710
DA68_17765	SM00954	Region found in RelA / SpoT proteins
DA68_17775	SM00098	Alkaline phosphatase homologues
DA68_17800	SM00855	Phosphoglycerate mutase family
DA68_17845	SM00530	Helix-turn-helix XRE-family like proteins 
DA68_17870	SM00382	ATPases associated with a variety of cellular activities
DA68_17970	SM00732	Likely ribonuclease with RNase H fold.
DA68_17980	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
DA68_18015	SM00028	Tetratricopeptide repeats
DA68_18035	SM00382	ATPases associated with a variety of cellular activities
DA68_18070	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
DA68_18070	SM00954	Region found in RelA / SpoT proteins
DA68_18115	SM01323	DA68_18115
DA68_18135	SM00382	ATPases associated with a variety of cellular activities
DA68_18140	SM00278	Helix-hairpin-helix DNA-binding motif class 1
DA68_18165	SM00257	Lysin motif
DA68_18220	SM00382	ATPases associated with a variety of cellular activities
DA68_18225	SM00387	Histidine kinase-like ATPases
DA68_18230	SM00448	cheY-homologous receiver domain
DA68_18230	SM00862	Transcriptional regulatory protein, C terminal
DA68_18240	SM01317	DA68_18240
DA68_18330	SM00257	Lysin motif
DA68_18340	SM01004	Delta-aminolevulinic acid dehydratase
DA68_18365	SM00347	helix_turn_helix multiple antibiotic resistance protein
DA68_18380	SM00382	ATPases associated with a variety of cellular activities
DA68_18380	SM00464	Found in ATP-dependent protease La (LON)
DA68_18385	SM00382	ATPases associated with a variety of cellular activities
DA68_18390	SM00382	ATPases associated with a variety of cellular activities
DA68_18390	SM00994	ClpX C4-type zinc finger
DA68_18390	SM01086	C-terminal, D2-small domain, of ClpB protein
DA68_18440	SM00909	Sporulation and spore germination
DA68_18455	SM00421	helix_turn_helix, Lux Regulon
DA68_18475	SM00530	Helix-turn-helix XRE-family like proteins 
DA68_18500	SM00382	ATPases associated with a variety of cellular activities
DA68_18550	SM00465	GIY-YIG type nucleases (URI domain)
DA68_18560	SM00893	Electron transfer flavoprotein domain
DA68_18565	SM00893	Electron transfer flavoprotein domain
DA68_18635	SM00382	ATPases associated with a variety of cellular activities
DA68_18640	SM00387	Histidine kinase-like ATPases
DA68_18640	SM00388	His Kinase A (phosphoacceptor) domain
DA68_18645	SM00448	cheY-homologous receiver domain
DA68_18645	SM00862	Transcriptional regulatory protein, C terminal
DA68_18660	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
DA68_18675	SM00382	ATPases associated with a variety of cellular activities
DA68_18690	SM00725	NEAr Transporter domain
DA68_18695	SM00725	NEAr Transporter domain
DA68_18700	SM00725	NEAr Transporter domain
DA68_18710	SM00363	S4 RNA-binding domain
DA68_18715	SM00463	Small MutS-related domain
DA68_18715	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
DA68_18715	SM00534	ATPase domain of DNA mismatch repair MUTS family
DA68_18720	SM00278	Helix-hairpin-helix DNA-binding motif class 1
DA68_18720	SM00481	DNA polymerase alpha chain like domain
DA68_18720	SM00483	DNA polymerase X family
DA68_18760	SM00873	B3/4 domain
DA68_18760	SM00874	tRNA synthetase B5 domain
DA68_18760	SM00896	Ferredoxin-fold anticodon binding domain
DA68_18770	SM00967	RNA 2'-O ribose methyltransferase substrate binding
DA68_18840	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
DA68_18855	SM00382	ATPases associated with a variety of cellular activities
DA68_18875	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
DA68_18890	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
DA68_18890	SM01232	DA68_18890
DA68_18895	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
DA68_18895	SM00474	3'-5' exonuclease
DA68_18895	SM00475	5'-3' exonuclease
DA68_18895	SM00482	DNA polymerase A domain
DA68_18900	SM00091	PAS domain
DA68_18900	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
DA68_18900	SM00387	Histidine kinase-like ATPases
DA68_18900	SM00388	His Kinase A (phosphoacceptor) domain
DA68_18905	SM00448	cheY-homologous receiver domain
DA68_18905	SM00862	Transcriptional regulatory protein, C terminal
DA68_18925	SM01329	DA68_18925
DA68_18970	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DA68_18975	SM00919	Malic enzyme, NAD binding domain
DA68_18975	SM01274	DA68_18975
DA68_18980	SM00481	DNA polymerase alpha chain like domain
DA68_19010	SM00116	Domain in cystathionine beta-synthase and other proteins.
DA68_19020	SM00849	Metallo-beta-lactamase superfamily
DA68_19065	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
DA68_19065	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
DA68_19180	SM00981	DA68_19180
DA68_19220	SM00363	S4 RNA-binding domain
DA68_19220	SM01390	DA68_19220
DA68_19250	SM00363	S4 RNA-binding domain
DA68_19270	SM01266	DA68_19270
DA68_19285	SM00116	Domain in cystathionine beta-synthase and other proteins.
DA68_19305	SM00448	cheY-homologous receiver domain
DA68_19305	SM00862	Transcriptional regulatory protein, C terminal
DA68_19310	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
DA68_19310	SM00387	Histidine kinase-like ATPases
DA68_19310	SM00388	His Kinase A (phosphoacceptor) domain
DA68_19315	SM00248	ankyrin repeats
DA68_19350	SM00354	helix_turn _helix lactose operon repressor
DA68_19355	SM00830	Chorismate mutase type II
DA68_19405	SM00382	ATPases associated with a variety of cellular activities
DA68_19405	SM00843	DA68_19405
DA68_19410	SM00646	DA68_19410
DA68_19450	SM00849	Metallo-beta-lactamase superfamily
DA68_19470	SM00642	Alpha-amylase domain
DA68_19485	SM00420	helix_turn_helix, Deoxyribose operon repressor
DA68_19490	SM00363	S4 RNA-binding domain
DA68_19510	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
DA68_19535	SM01058	CarD-like/TRCF domain
DA68_19570	SM00852	Probable molybdopterin binding domain
DA68_19585	SM00729	Elongator protein 3, MiaB family, Radical SAM
DA68_19605	SM00450	Rhodanese Homology Domain
DA68_19685	SM00382	ATPases associated with a variety of cellular activities
DA68_19705	SM00729	Elongator protein 3, MiaB family, Radical SAM
DA68_19715	SM00382	ATPases associated with a variety of cellular activities
DA68_19750	SM00014	Acid phosphatase homologues
DA68_19765	SM00852	Probable molybdopterin binding domain
DA68_19820	SM00387	Histidine kinase-like ATPases
DA68_19825	SM00387	Histidine kinase-like ATPases
DA68_19825	SM00388	His Kinase A (phosphoacceptor) domain
DA68_19855	SM00382	ATPases associated with a variety of cellular activities
DA68_19915	SM01234	DA68_19915
DA68_19920	SM00947	Carbonic anhydrase
DA68_19985	SM00899	DA68_19985
DA68_19995	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
DA68_19995	SM00387	Histidine kinase-like ATPases
DA68_19995	SM00388	His Kinase A (phosphoacceptor) domain
DA68_20000	SM00448	cheY-homologous receiver domain
DA68_20000	SM00862	Transcriptional regulatory protein, C terminal
DA68_20030	SM00046	Diacylglycerol kinase catalytic domain (presumed)
DA68_20075	SM00382	ATPases associated with a variety of cellular activities
DA68_20105	SM00382	ATPases associated with a variety of cellular activities
DA68_20110	SM00342	helix_turn_helix, arabinose operon control protein
DA68_20110	SM00871	Bacterial transcription activator, effector binding domain
DA68_20120	SM00382	ATPases associated with a variety of cellular activities
DA68_20130	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
DA68_20135	SM00448	cheY-homologous receiver domain
DA68_20135	SM00862	Transcriptional regulatory protein, C terminal
DA68_20140	SM00387	Histidine kinase-like ATPases
DA68_20155	SM00382	ATPases associated with a variety of cellular activities
DA68_20175	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DA68_20175	SM00866	DA68_20175
DA68_20205	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
DA68_20205	SM00387	Histidine kinase-like ATPases
DA68_20205	SM00388	His Kinase A (phosphoacceptor) domain
DA68_20210	SM00448	cheY-homologous receiver domain
DA68_20210	SM00862	Transcriptional regulatory protein, C terminal
DA68_20215	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
DA68_20255	SM00357	Cold shock protein domain
DA68_20295	SM00642	Alpha-amylase domain
DA68_20460	SM00316	Ribosomal protein S1-like RNA-binding domain
DA68_20470	SM00344	helix_turn_helix ASNC type
DA68_20505	SM01298	DA68_20505
DA68_20510	SM00479	DA68_20510
DA68_20645	SM00871	Bacterial transcription activator, effector binding domain
DA68_20695	SM00382	ATPases associated with a variety of cellular activities
DA68_20725	SM00860	SMI1 / KNR4 family
DA68_20805	SM00382	ATPases associated with a variety of cellular activities
DA68_20855	SM00422	helix_turn_helix, mercury resistance
DA68_20870	SM00855	Phosphoglycerate mutase family
DA68_20880	SM00729	Elongator protein 3, MiaB family, Radical SAM
DA68_20930	SM00382	ATPases associated with a variety of cellular activities
DA68_20945	SM00382	ATPases associated with a variety of cellular activities
DA68_20945	SM00930	DA68_20945
DA68_20960	SM00493	DA68_20960
DA68_21010	SM00849	Metallo-beta-lactamase superfamily
DA68_21055	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
DA68_21055	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
DA68_21125	SM00530	Helix-turn-helix XRE-family like proteins 
DA68_21145	SM00448	cheY-homologous receiver domain
DA68_21145	SM00862	Transcriptional regulatory protein, C terminal
DA68_21150	SM00387	Histidine kinase-like ATPases
DA68_21150	SM00388	His Kinase A (phosphoacceptor) domain
DA68_21175	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
DA68_21175	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
DA68_21180	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
DA68_21180	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
DA68_21200	SM00347	helix_turn_helix multiple antibiotic resistance protein
DA68_21290	SM01276	DA68_21290
DA68_21325	SM00363	S4 RNA-binding domain
DA68_21335	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
DA68_21340	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
DA68_21375	SM00382	ATPases associated with a variety of cellular activities
DA68_21410	SM00382	ATPases associated with a variety of cellular activities
DA68_21430	SM00448	cheY-homologous receiver domain
DA68_21430	SM00862	Transcriptional regulatory protein, C terminal
DA68_21475	SM00487	DEAD-like helicases superfamily
DA68_21505	SM00316	Ribosomal protein S1-like RNA-binding domain
DA68_21505	SM00357	Cold shock protein domain
DA68_21505	SM00955	DA68_21505
DA68_21535	SM01192	DA68_21535
DA68_21535	SM01193	DA68_21535
DA68_21555	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
DA68_21585	SM00382	ATPases associated with a variety of cellular activities
DA68_21590	SM00387	Histidine kinase-like ATPases
DA68_21595	SM00421	helix_turn_helix, Lux Regulon
DA68_21595	SM00448	cheY-homologous receiver domain
DA68_21685	SM00028	Tetratricopeptide repeats
DA68_21725	SM00487	DEAD-like helicases superfamily
DA68_21725	SM00490	helicase superfamily c-terminal domain
DA68_21740	SM00422	helix_turn_helix, mercury resistance
DA68_21750	SM00530	Helix-turn-helix XRE-family like proteins 
DA68_21765	SM00422	helix_turn_helix, mercury resistance
DA68_21775	SM00382	ATPases associated with a variety of cellular activities
DA68_21785	SM00382	ATPases associated with a variety of cellular activities
DA68_21795	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
DA68_21795	SM00245	tail specific protease
DA68_21805	SM00382	ATPases associated with a variety of cellular activities
DA68_21815	SM00937	DA68_21815
DA68_21820	SM00957	SecA DEAD-like domain
DA68_21820	SM00958	SecA preprotein cross-linking domain
DA68_21830	SM00382	ATPases associated with a variety of cellular activities
DA68_21865	SM00357	Cold shock protein domain
DA68_21875	SM00487	DEAD-like helicases superfamily
DA68_21875	SM00490	helicase superfamily c-terminal domain
DA68_21910	SM00984	UDP binding domain
DA68_21925	SM00382	ATPases associated with a variety of cellular activities
DA68_21930	SM00754	A domain in the BMP inhibitor chordin and in microbial proteins.
DA68_22065	SM00287	Bacterial SH3 domain homologues
DA68_22095	SM00287	Bacterial SH3 domain homologues
DA68_22125	SM00487	DEAD-like helicases superfamily
DA68_22125	SM00490	helicase superfamily c-terminal domain
DA68_22170	SM00382	ATPases associated with a variety of cellular activities
DA68_22195	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
DA68_22195	SM00387	Histidine kinase-like ATPases
DA68_22195	SM00388	His Kinase A (phosphoacceptor) domain
DA68_22200	SM00448	cheY-homologous receiver domain
DA68_22200	SM00862	Transcriptional regulatory protein, C terminal
DA68_22220	SM00984	UDP binding domain
DA68_22345	SM00382	ATPases associated with a variety of cellular activities
DA68_22350	SM00850	LytTr DNA-binding domain
DA68_22430	SM00052	Putative diguanylate phosphodiesterase
DA68_22430	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
DA68_22430	SM00091	PAS domain
DA68_22430	SM00267	diguanylate cyclase
DA68_22450	SM00382	ATPases associated with a variety of cellular activities
DA68_22515	SM00226	Low molecular weight phosphatase family
DA68_22530	SM00903	Flavin reductase like domain
DA68_22570	SM00937	DA68_22570
DA68_22585	SM00357	Cold shock protein domain
DA68_22585	SM00382	ATPases associated with a variety of cellular activities
DA68_22585	SM00959	Rho termination factor, N-terminal domain
DA68_22605	SM00448	cheY-homologous receiver domain
DA68_22655	SM00155	Phospholipase D. Active site motifs.
DA68_22665	SM00052	Putative diguanylate phosphodiesterase
DA68_22665	SM00267	diguanylate cyclase
DA68_22675	SM00530	Helix-turn-helix XRE-family like proteins 
DA68_22685	SM00421	helix_turn_helix, Lux Regulon
DA68_22685	SM00448	cheY-homologous receiver domain
DA68_22700	SM00382	ATPases associated with a variety of cellular activities
DA68_22740	SM00836	DALR anticodon binding domain
DA68_22740	SM01016	Arginyl tRNA synthetase N terminal dom
DA68_22780	SM00422	helix_turn_helix, mercury resistance
DA68_22810	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
DA68_22820	SM00382	ATPases associated with a variety of cellular activities
DA68_22860	SM00936	Penicillin-binding protein 5, C-terminal domain 
DA68_22905	SM00986	Uracil DNA glycosylase superfamily
DA68_22905	SM00987	UreE urease accessory protein, C-terminal domain 
DA68_22915	SM00382	ATPases associated with a variety of cellular activities
DA68_22925	SM00354	helix_turn _helix lactose operon repressor
DA68_22960	SM00100	Cyclic nucleotide-monophosphate binding domain
DA68_22970	SM00421	helix_turn_helix, Lux Regulon
DA68_22970	SM00448	cheY-homologous receiver domain
DA68_22975	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
DA68_22985	SM00267	diguanylate cyclase
DA68_23000	SM00448	cheY-homologous receiver domain
DA68_23000	SM00850	LytTr DNA-binding domain
DA68_23030	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
DA68_23070	SM00382	ATPases associated with a variety of cellular activities
DA68_23105	SM00448	cheY-homologous receiver domain
DA68_23105	SM00850	LytTr DNA-binding domain
DA68_23110	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
DA68_23110	SM00387	Histidine kinase-like ATPases
DA68_23160	SM00487	DEAD-like helicases superfamily
DA68_23160	SM00490	helicase superfamily c-terminal domain
DA68_23165	SM01240	DA68_23165
DA68_23180	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
DA68_23180	SM00387	Histidine kinase-like ATPases
DA68_23180	SM00388	His Kinase A (phosphoacceptor) domain
DA68_23195	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
DA68_23200	SM00849	Metallo-beta-lactamase superfamily
DA68_23215	SM00091	PAS domain
DA68_23215	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
DA68_23215	SM00387	Histidine kinase-like ATPases
DA68_23215	SM00388	His Kinase A (phosphoacceptor) domain
DA68_23220	SM00448	cheY-homologous receiver domain
DA68_23220	SM00862	Transcriptional regulatory protein, C terminal
DA68_23245	SM00788	Adenylosuccinate synthetase
DA68_23260	SM00267	diguanylate cyclase
DA68_23305	SM00470	ParB-like nuclease domain
DA68_23315	SM00470	ParB-like nuclease domain
DA68_23325	SM01228	DA68_23325
DA68_23335	SM00393	Putative single-stranded nucleic acids-binding domain
DA68_23335	SM01245	DA68_23335
DA68_23355	SM00382	ATPases associated with a variety of cellular activities
DA68_23355	SM00760	Bacterial dnaA protein helix-turn-helix domain
DA68_23360	SM00480	DNA polymerase III beta subunit
DA68_23375	SM00387	Histidine kinase-like ATPases
DA68_23375	SM00433	TopoisomeraseII
DA68_23380	SM00434	DNA Topoisomerase IV
DA68_23415	SM00116	Domain in cystathionine beta-synthase and other proteins.
DA68_23415	SM01240	DA68_23415
DA68_23420	SM00936	Penicillin-binding protein 5, C-terminal domain 
DA68_23475	SM00382	ATPases associated with a variety of cellular activities
DA68_23485	SM00493	DA68_23485
DA68_23560	SM00465	GIY-YIG type nucleases (URI domain)
DA68_23570	SM00966	SpoVT / AbrB like domain 
DA68_23585	SM00493	DA68_23585
DA68_23590	SM00650	Ribosomal RNA adenine dimethylases
DA68_23635	SM01400	DA68_23635
DA68_23650	SM00487	DEAD-like helicases superfamily
DA68_23650	SM00490	helicase superfamily c-terminal domain
DA68_23650	SM00982	DA68_23650
DA68_23650	SM01058	CarD-like/TRCF domain
DA68_23655	SM00966	SpoVT / AbrB like domain 
DA68_23670	SM00363	S4 RNA-binding domain
DA68_23690	SM00316	Ribosomal protein S1-like RNA-binding domain
DA68_23705	SM00331	Sigma factor PP2C-like phosphatases
DA68_23705	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
DA68_23710	SM00977	TilS substrate C-terminal domain
DA68_23720	SM00382	ATPases associated with a variety of cellular activities
DA68_23760	SM00905	Dihydroneopterin aldolase
DA68_23770	SM00530	Helix-turn-helix XRE-family like proteins 
DA68_23875	SM00382	ATPases associated with a variety of cellular activities
DA68_23875	SM01086	C-terminal, D2-small domain, of ClpB protein
DA68_23880	SM00382	ATPases associated with a variety of cellular activities
DA68_23890	SM00670	Large family of predicted nucleotide-binding domains
DA68_23915	SM00840	DA68_23915
DA68_23920	SM00535	Ribonuclease III family
DA68_23925	SM00967	RNA 2'-O ribose methyltransferase substrate binding
DA68_23935	SM00421	helix_turn_helix, Lux Regulon
DA68_23945	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
DA68_23950	SM00649	Ribosomal protein L11/L12
DA68_23980	SM00663	RNA polymerase I subunit A N-terminus
DA68_24000	SM00838	Elongation factor G C-terminus
DA68_24000	SM00889	Elongation factor G, domain IV
DA68_24010	SM01403	DA68_24010
DA68_24030	SM01382	DA68_24030
DA68_24030	SM01383	DA68_24030
DA68_24045	SM00322	K homology RNA-binding domain
DA68_24065	SM01374	DA68_24065
DA68_24070	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
DA68_24130	SM00316	Ribosomal protein S1-like RNA-binding domain
DA68_24150	SM00662	RNA polymerases D
DA68_24160	SM00382	ATPases associated with a variety of cellular activities
DA68_24165	SM00382	ATPases associated with a variety of cellular activities
DA68_24195	SM00646	DA68_24195
DA68_24210	SM01251	DA68_24210
DA68_24350	SM00382	ATPases associated with a variety of cellular activities
DA68_24350	SM00930	DA68_24350
DA68_24400	SM00342	helix_turn_helix, arabinose operon control protein
DA68_24470	SM00563	Phosphate acyltransferases
DA68_24475	SM00354	helix_turn _helix lactose operon repressor
DA68_24530	SM00382	ATPases associated with a variety of cellular activities
DA68_24555	SM00382	ATPases associated with a variety of cellular activities
DA68_24560	SM00382	ATPases associated with a variety of cellular activities
DA68_24630	SM00487	DEAD-like helicases superfamily
DA68_24630	SM00490	helicase superfamily c-terminal domain
DA68_24655	SM01005	Alanine racemase, C-terminal domain
DA68_24670	SM00316	Ribosomal protein S1-like RNA-binding domain
DA68_24670	SM00732	Likely ribonuclease with RNase H fold.
DA68_24675	SM00731	SprT homologues.
DA68_24785	SM00382	ATPases associated with a variety of cellular activities
DA68_24790	SM00881	CoA binding domain
DA68_24805	SM00883	Chaperonin 10 Kd subunit
DA68_24825	SM00448	cheY-homologous receiver domain
DA68_24825	SM00862	Transcriptional regulatory protein, C terminal
DA68_24830	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
DA68_24830	SM00387	Histidine kinase-like ATPases
DA68_24830	SM00388	His Kinase A (phosphoacceptor) domain
DA68_24875	SM01022	DA68_24875
DA68_24890	SM00382	ATPases associated with a variety of cellular activities
DA68_24895	SM00387	Histidine kinase-like ATPases
DA68_24895	SM00388	His Kinase A (phosphoacceptor) domain
DA68_24900	SM00448	cheY-homologous receiver domain
DA68_24900	SM00862	Transcriptional regulatory protein, C terminal
DA68_24995	SM01001	AIR carboxylase
DA68_25005	SM00998	Adenylosuccinate lyase C-terminus
DA68_25020	SM01211	DA68_25020
DA68_25045	SM00798	AICARFT/IMPCHase bienzyme
DA68_25045	SM00851	MGS-like domain
DA68_25050	SM01209	DA68_25050
DA68_25050	SM01210	DA68_25050
DA68_25060	SM00244	prohibitin homologues
DA68_25080	SM00278	Helix-hairpin-helix DNA-binding motif class 1
DA68_25080	SM00292	breast cancer carboxy-terminal domain
DA68_25080	SM00532	Ligase N family
DA68_25105	SM00382	ATPases associated with a variety of cellular activities
DA68_25105	SM00930	DA68_25105
DA68_25130	SM00347	helix_turn_helix multiple antibiotic resistance protein
DA68_25150	SM00845	GatB domain
DA68_25155	SM00046	Diacylglycerol kinase catalytic domain (presumed)
DA68_25175	SM00382	ATPases associated with a variety of cellular activities
DA68_25240	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
DA68_25285	SM01007	Class II Aldolase and Adducin N-terminal domain
DA68_25340	SM00387	Histidine kinase-like ATPases
DA68_25340	SM00388	His Kinase A (phosphoacceptor) domain
DA68_25385	SM00062	Bacterial periplasmic substrate-binding proteins
DA68_25385	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
DA68_25390	SM00382	ATPases associated with a variety of cellular activities
DA68_25395	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
DA68_25395	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
DA68_25425	SM00100	Cyclic nucleotide-monophosphate binding domain
DA68_25425	SM00419	helix_turn_helix, cAMP Regulatory protein
DA68_25440	SM00642	Alpha-amylase domain
DA68_25460	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
DA68_25460	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
DA68_25460	SM00493	DA68_25460
DA68_25480	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
DA68_25480	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
DA68_25505	SM00382	ATPases associated with a variety of cellular activities
DA68_25510	SM00060	Fibronectin type 3 domain
DA68_25510	SM00636	DA68_25510
DA68_25510	SM00637	DA68_25510
DA68_25545	SM00530	Helix-turn-helix XRE-family like proteins 
DA68_25565	SM00946	Prolyl-tRNA synthetase, C-terminal
DA68_25610	SM00831	Cation transporter/ATPase, N-terminus
DA68_25620	SM00226	Low molecular weight phosphatase family
DA68_25710	SM00478	endonuclease III
DA68_25730	SM00382	ATPases associated with a variety of cellular activities
DA68_25750	SM00530	Helix-turn-helix XRE-family like proteins 
DA68_25795	SM00984	UDP binding domain
DA68_25880	SM00478	endonuclease III
DA68_25880	SM00525	DA68_25880
DA68_25905	SM00382	ATPases associated with a variety of cellular activities
DA68_25925	SM00382	ATPases associated with a variety of cellular activities
DA68_26080	SM00567	E-Z type HEAT repeats
DA68_26095	SM00052	Putative diguanylate phosphodiesterase
DA68_26095	SM00091	PAS domain
DA68_26095	SM00267	diguanylate cyclase
DA68_26100	SM00763	PrkA AAA domain
DA68_26110	SM00365	Leucine-rich repeat, SDS22-like subfamily
DA68_26110	SM00725	NEAr Transporter domain
DA68_26125	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
DA68_26135	SM00244	prohibitin homologues
DA68_26140	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
DA68_26140	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
DA68_26145	SM00091	PAS domain
DA68_26145	SM00387	Histidine kinase-like ATPases
DA68_26150	SM00448	cheY-homologous receiver domain
DA68_26170	SM00248	ankyrin repeats
DA68_26185	SM00382	ATPases associated with a variety of cellular activities
DA68_26210	SM00448	cheY-homologous receiver domain
DA68_26210	SM00862	Transcriptional regulatory protein, C terminal
DA68_26230	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
DA68_26230	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
DA68_26235	SM00387	Histidine kinase-like ATPases
DA68_26240	SM00448	cheY-homologous receiver domain
DA68_26250	SM00919	Malic enzyme, NAD binding domain
DA68_26250	SM01274	DA68_26250
DA68_26265	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DA68_26275	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
DA68_26275	SM00387	Histidine kinase-like ATPases
DA68_26275	SM00388	His Kinase A (phosphoacceptor) domain
DA68_26280	SM00448	cheY-homologous receiver domain
DA68_26280	SM00862	Transcriptional regulatory protein, C terminal
DA68_26300	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
DA68_26300	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
DA68_26315	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
DA68_26315	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
DA68_26330	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
DA68_26345	SM00028	Tetratricopeptide repeats
DA68_26345	SM00530	Helix-turn-helix XRE-family like proteins 
DA68_26390	SM01091	Transporter associated domain
DA68_26405	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
DA68_26435	SM00382	ATPases associated with a variety of cellular activities
DA68_26460	SM00327	von Willebrand factor (vWF) type A domain
DA68_26465	SM00382	ATPases associated with a variety of cellular activities
DA68_26470	SM00155	Phospholipase D. Active site motifs.
DA68_26480	SM00052	Putative diguanylate phosphodiesterase
DA68_26480	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
DA68_26480	SM00267	diguanylate cyclase
DA68_26490	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DA68_26490	SM00866	DA68_26490
DA68_26500	SM00642	Alpha-amylase domain
DA68_26535	SM00382	ATPases associated with a variety of cellular activities
DA68_26540	SM00062	Bacterial periplasmic substrate-binding proteins
DA68_26540	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
DA68_26590	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
DA68_26590	SM00387	Histidine kinase-like ATPases
DA68_26590	SM00388	His Kinase A (phosphoacceptor) domain
DA68_26595	SM00448	cheY-homologous receiver domain
DA68_26595	SM00862	Transcriptional regulatory protein, C terminal
DA68_26625	SM00347	helix_turn_helix multiple antibiotic resistance protein
DA68_26635	SM00354	helix_turn _helix lactose operon repressor
DA68_26650	SM00382	ATPases associated with a variety of cellular activities
DA68_26690	SM00470	ParB-like nuclease domain
DA68_26705	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
DA68_26720	SM00342	helix_turn_helix, arabinose operon control protein
DA68_26745	SM00387	Histidine kinase-like ATPases
DA68_26745	SM00388	His Kinase A (phosphoacceptor) domain
DA68_26750	SM00448	cheY-homologous receiver domain
DA68_26750	SM00862	Transcriptional regulatory protein, C terminal
DA68_26780	SM00347	helix_turn_helix multiple antibiotic resistance protein
DA68_26785	SM00347	helix_turn_helix multiple antibiotic resistance protein
DA68_26800	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
DA68_26800	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
DA68_26845	SM00825	Beta-ketoacyl synthase
DA68_26880	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
DA68_26895	SM00382	ATPases associated with a variety of cellular activities
DA68_26955	SM00382	ATPases associated with a variety of cellular activities
DA68_26960	SM01260	DA68_26960
DA68_26980	SM01260	DA68_26980
DA68_27005	SM00966	SpoVT / AbrB like domain 
DA68_27010	SM00287	Bacterial SH3 domain homologues
DA68_27010	SM00644	DA68_27010
DA68_27045	SM01120	DA68_27045
DA68_27065	SM00060	Fibronectin type 3 domain
DA68_27065	SM00495	Chitin-binding domain type 3
DA68_27075	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DA68_27080	SM00382	ATPases associated with a variety of cellular activities
DA68_27095	SM00148	Phospholipase C, catalytic domain (part); domain X
DA68_27105	SM00411	bacterial (prokaryotic) histone like domain
DA68_27110	SM00382	ATPases associated with a variety of cellular activities
DA68_27165	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
DA68_27165	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
DA68_27195	SM01321	DA68_27195
DA68_27210	SM00100	Cyclic nucleotide-monophosphate binding domain
DA68_27210	SM00419	helix_turn_helix, cAMP Regulatory protein
DA68_27225	SM00849	Metallo-beta-lactamase superfamily
DA68_27255	SM00729	Elongator protein 3, MiaB family, Radical SAM
DA68_27315	SM00530	Helix-turn-helix XRE-family like proteins 
DA68_27320	SM00530	Helix-turn-helix XRE-family like proteins 
DA68_27435	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
DA68_27435	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
DA68_27435	SM00493	DA68_27435
DA68_27455	SM00966	SpoVT / AbrB like domain 
DA68_27495	SM00530	Helix-turn-helix XRE-family like proteins 
DA68_27520	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
DA68_27535	SM01321	DA68_27535
DA68_27565	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
DA68_27565	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
DA68_27585	SM00382	ATPases associated with a variety of cellular activities
DA68_27590	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DA68_27630	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
DA68_27660	SM00530	Helix-turn-helix XRE-family like proteins 
DA68_27680	SM00823	Phosphopantetheine attachment site
DA68_27680	SM01294	DA68_27680
DA68_27710	SM00822	DA68_27710
DA68_27710	SM00823	Phosphopantetheine attachment site
DA68_27710	SM00825	Beta-ketoacyl synthase
DA68_27710	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
DA68_27740	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
DA68_27765	SM00822	DA68_27765
DA68_27765	SM00823	Phosphopantetheine attachment site
DA68_27765	SM00825	Beta-ketoacyl synthase
DA68_27765	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
DA68_27775	SM00382	ATPases associated with a variety of cellular activities
DA68_27905	SM00287	Bacterial SH3 domain homologues
DA68_27905	SM00644	DA68_27905
DA68_27955	SM00422	helix_turn_helix, mercury resistance
DA68_28010	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
DA68_28050	SM00901	DA68_28050
DA68_28060	SM00894	Excalibur calcium-binding domain
DA68_28075	SM00530	Helix-turn-helix XRE-family like proteins 
DA68_28100	SM00530	Helix-turn-helix XRE-family like proteins 
DA68_28105	SM01040	BRO family, N-terminal domain
