BCAH820_0001 SM00382 ATPases associated with a variety of cellular activities BCAH820_0001 SM00760 Bacterial dnaA protein helix-turn-helix domain BCAH820_0002 SM00480 DNA polymerase III beta subunit BCAH820_0005 SM00387 Histidine kinase-like ATPases BCAH820_0005 SM00433 TopoisomeraseII BCAH820_0006 SM00434 DNA Topoisomerase IV BCAH820_0012 SM00116 Domain in cystathionine beta-synthase and other proteins. BCAH820_0012 SM01240 BCAH820_0012 BCAH820_0013 SM00936 Penicillin-binding protein 5, C-terminal domain BCAH820_0023 SM00382 ATPases associated with a variety of cellular activities BCAH820_0025 SM00493 BCAH820_0025 BCAH820_0042 SM00966 SpoVT / AbrB like domain BCAH820_0045 SM00493 BCAH820_0045 BCAH820_0046 SM00650 Ribosomal RNA adenine dimethylases BCAH820_0056 SM01400 BCAH820_0056 BCAH820_0059 SM00487 DEAD-like helicases superfamily BCAH820_0059 SM00490 helicase superfamily c-terminal domain BCAH820_0059 SM00982 BCAH820_0059 BCAH820_0059 SM01058 CarD-like/TRCF domain BCAH820_0060 SM00966 SpoVT / AbrB like domain BCAH820_0063 SM00363 S4 RNA-binding domain BCAH820_0067 SM00316 Ribosomal protein S1-like RNA-binding domain BCAH820_0070 SM00331 Sigma factor PP2C-like phosphatases BCAH820_0070 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BCAH820_0071 SM00977 TilS substrate C-terminal domain BCAH820_0073 SM00382 ATPases associated with a variety of cellular activities BCAH820_0081 SM00905 Dihydroneopterin aldolase BCAH820_0083 SM00530 Helix-turn-helix XRE-family like proteins BCAH820_0091 SM00382 ATPases associated with a variety of cellular activities BCAH820_0091 SM01086 C-terminal, D2-small domain, of ClpB protein BCAH820_0092 SM00382 ATPases associated with a variety of cellular activities BCAH820_0100 SM00840 BCAH820_0100 BCAH820_0101 SM00535 Ribonuclease III family BCAH820_0102 SM00967 RNA 2'-O ribose methyltransferase substrate binding BCAH820_0104 SM00421 helix_turn_helix, Lux Regulon BCAH820_0106 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BCAH820_0108 SM00649 Ribosomal protein L11/L12 BCAH820_0115 SM00663 RNA polymerase I subunit A N-terminus BCAH820_0119 SM00838 Elongation factor G C-terminus BCAH820_0119 SM00889 Elongation factor G, domain IV BCAH820_0121 SM01403 BCAH820_0121 BCAH820_0125 SM01382 BCAH820_0125 BCAH820_0125 SM01383 BCAH820_0125 BCAH820_0128 SM00322 K homology RNA-binding domain BCAH820_0132 SM01374 BCAH820_0132 BCAH820_0133 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BCAH820_0146 SM00316 Ribosomal protein S1-like RNA-binding domain BCAH820_0150 SM00662 RNA polymerases D BCAH820_0152 SM00382 ATPases associated with a variety of cellular activities BCAH820_0153 SM00382 ATPases associated with a variety of cellular activities BCAH820_0159 SM00646 BCAH820_0159 BCAH820_0162 SM01251 BCAH820_0162 BCAH820_0183 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCAH820_0183 SM00895 BCAH820_0183 BCAH820_0186 SM01350 BCAH820_0186 BCAH820_0195 SM00382 ATPases associated with a variety of cellular activities BCAH820_0195 SM00930 BCAH820_0195 BCAH820_0197 SM00829 Enoylreductase BCAH820_0207 SM00382 ATPases associated with a variety of cellular activities BCAH820_0208 SM00382 ATPases associated with a variety of cellular activities BCAH820_0211 SM00342 helix_turn_helix, arabinose operon control protein BCAH820_0226 SM00563 Phosphate acyltransferases BCAH820_0227 SM00354 helix_turn _helix lactose operon repressor BCAH820_0238 SM00382 ATPases associated with a variety of cellular activities BCAH820_0244 SM00382 ATPases associated with a variety of cellular activities BCAH820_0245 SM00382 ATPases associated with a variety of cellular activities BCAH820_0259 SM00487 DEAD-like helicases superfamily BCAH820_0259 SM00490 helicase superfamily c-terminal domain BCAH820_0264 SM01005 Alanine racemase, C-terminal domain BCAH820_0267 SM00316 Ribosomal protein S1-like RNA-binding domain BCAH820_0267 SM00732 Likely ribonuclease with RNase H fold. BCAH820_0268 SM00731 SprT homologues. BCAH820_0288 SM00382 ATPases associated with a variety of cellular activities BCAH820_0289 SM00881 CoA binding domain BCAH820_0292 SM00883 Chaperonin 10 Kd subunit BCAH820_0296 SM00448 cheY-homologous receiver domain BCAH820_0296 SM00862 Transcriptional regulatory protein, C terminal BCAH820_0297 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCAH820_0297 SM00387 Histidine kinase-like ATPases BCAH820_0297 SM00388 His Kinase A (phosphoacceptor) domain BCAH820_0315 SM00382 ATPases associated with a variety of cellular activities BCAH820_0316 SM00387 Histidine kinase-like ATPases BCAH820_0316 SM00388 His Kinase A (phosphoacceptor) domain BCAH820_0317 SM00448 cheY-homologous receiver domain BCAH820_0317 SM00862 Transcriptional regulatory protein, C terminal BCAH820_0320 SM01001 AIR carboxylase BCAH820_0322 SM00998 Adenylosuccinate lyase C-terminus BCAH820_0325 SM01211 BCAH820_0325 BCAH820_0330 SM00798 AICARFT/IMPCHase bienzyme BCAH820_0330 SM00851 MGS-like domain BCAH820_0331 SM01209 BCAH820_0331 BCAH820_0331 SM01210 BCAH820_0331 BCAH820_0333 SM00244 prohibitin homologues BCAH820_0337 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BCAH820_0337 SM00292 breast cancer carboxy-terminal domain BCAH820_0337 SM00532 Ligase N family BCAH820_0343 SM00382 ATPases associated with a variety of cellular activities BCAH820_0343 SM00930 BCAH820_0343 BCAH820_0350 SM00347 helix_turn_helix multiple antibiotic resistance protein BCAH820_0354 SM00845 GatB domain BCAH820_0355 SM00046 Diacylglycerol kinase catalytic domain (presumed) BCAH820_0358 SM00382 ATPases associated with a variety of cellular activities BCAH820_0367 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BCAH820_0367 SM00387 Histidine kinase-like ATPases BCAH820_0367 SM00388 His Kinase A (phosphoacceptor) domain BCAH820_0371 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BCAH820_0380 SM01007 Class II Aldolase and Adducin N-terminal domain BCAH820_0402 SM00062 Bacterial periplasmic substrate-binding proteins BCAH820_0402 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BCAH820_0403 SM00382 ATPases associated with a variety of cellular activities BCAH820_0405 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BCAH820_0405 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCAH820_0411 SM00100 Cyclic nucleotide-monophosphate binding domain BCAH820_0411 SM00419 helix_turn_helix, cAMP Regulatory protein BCAH820_0413 SM00642 Alpha-amylase domain BCAH820_0418 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BCAH820_0418 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BCAH820_0418 SM00493 BCAH820_0418 BCAH820_0422 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BCAH820_0422 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCAH820_0426 SM00382 ATPases associated with a variety of cellular activities BCAH820_0427 SM00382 ATPases associated with a variety of cellular activities BCAH820_0428 SM00060 Fibronectin type 3 domain BCAH820_0428 SM00636 BCAH820_0428 BCAH820_0428 SM00637 BCAH820_0428 BCAH820_0435 SM00530 Helix-turn-helix XRE-family like proteins BCAH820_0440 SM00946 Prolyl-tRNA synthetase, C-terminal BCAH820_0449 SM00831 Cation transporter/ATPase, N-terminus BCAH820_0451 SM00226 Low molecular weight phosphatase family BCAH820_0471 SM00478 endonuclease III BCAH820_0476 SM00530 Helix-turn-helix XRE-family like proteins BCAH820_0487 SM00984 UDP binding domain BCAH820_0503 SM00478 endonuclease III BCAH820_0503 SM00525 BCAH820_0503 BCAH820_0511 SM00382 ATPases associated with a variety of cellular activities BCAH820_0515 SM00382 ATPases associated with a variety of cellular activities BCAH820_0546 SM00567 E-Z type HEAT repeats BCAH820_0549 SM00052 Putative diguanylate phosphodiesterase BCAH820_0549 SM00091 PAS domain BCAH820_0549 SM00267 diguanylate cyclase BCAH820_0550 SM00763 PrkA AAA domain BCAH820_0551 SM00857 Resolvase, N terminal domain BCAH820_0555 SM00530 Helix-turn-helix XRE-family like proteins BCAH820_0556 SM00530 Helix-turn-helix XRE-family like proteins BCAH820_0608 SM00365 Leucine-rich repeat, SDS22-like subfamily BCAH820_0608 SM00369 Leucine-rich repeats, typical (most populated) subfamily BCAH820_0608 SM00725 NEAr Transporter domain BCAH820_0611 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BCAH820_0613 SM00244 prohibitin homologues BCAH820_0614 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BCAH820_0614 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCAH820_0615 SM00091 PAS domain BCAH820_0615 SM00387 Histidine kinase-like ATPases BCAH820_0616 SM00448 cheY-homologous receiver domain BCAH820_0620 SM00248 ankyrin repeats BCAH820_0622 SM00382 ATPases associated with a variety of cellular activities BCAH820_0627 SM00448 cheY-homologous receiver domain BCAH820_0627 SM00862 Transcriptional regulatory protein, C terminal BCAH820_0628 SM00387 Histidine kinase-like ATPases BCAH820_0628 SM00388 His Kinase A (phosphoacceptor) domain BCAH820_0631 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BCAH820_0631 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCAH820_0632 SM00387 Histidine kinase-like ATPases BCAH820_0633 SM00448 cheY-homologous receiver domain BCAH820_0635 SM00919 Malic enzyme, NAD binding domain BCAH820_0635 SM01274 BCAH820_0635 BCAH820_0638 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCAH820_0640 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCAH820_0640 SM00387 Histidine kinase-like ATPases BCAH820_0640 SM00388 His Kinase A (phosphoacceptor) domain BCAH820_0641 SM00448 cheY-homologous receiver domain BCAH820_0641 SM00862 Transcriptional regulatory protein, C terminal BCAH820_0645 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BCAH820_0645 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BCAH820_0649 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BCAH820_0649 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BCAH820_0651 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCAH820_0654 SM00028 Tetratricopeptide repeats BCAH820_0654 SM00530 Helix-turn-helix XRE-family like proteins BCAH820_0664 SM01091 Transporter associated domain BCAH820_0667 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCAH820_0673 SM00382 ATPases associated with a variety of cellular activities BCAH820_0678 SM00327 von Willebrand factor (vWF) type A domain BCAH820_0679 SM00382 ATPases associated with a variety of cellular activities BCAH820_0680 SM00155 Phospholipase D. Active site motifs. BCAH820_0683 SM00052 Putative diguanylate phosphodiesterase BCAH820_0683 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BCAH820_0683 SM00091 PAS domain BCAH820_0683 SM00267 diguanylate cyclase BCAH820_0685 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCAH820_0685 SM00866 BCAH820_0685 BCAH820_0687 SM00642 Alpha-amylase domain BCAH820_0696 SM00382 ATPases associated with a variety of cellular activities BCAH820_0697 SM00062 Bacterial periplasmic substrate-binding proteins BCAH820_0697 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BCAH820_0707 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCAH820_0707 SM00387 Histidine kinase-like ATPases BCAH820_0707 SM00388 His Kinase A (phosphoacceptor) domain BCAH820_0708 SM00448 cheY-homologous receiver domain BCAH820_0708 SM00862 Transcriptional regulatory protein, C terminal BCAH820_0716 SM00382 ATPases associated with a variety of cellular activities BCAH820_0717 SM00382 ATPases associated with a variety of cellular activities BCAH820_0719 SM00347 helix_turn_helix multiple antibiotic resistance protein BCAH820_0721 SM00354 helix_turn _helix lactose operon repressor BCAH820_0724 SM00382 ATPases associated with a variety of cellular activities BCAH820_0730 SM00829 Enoylreductase BCAH820_0732 SM00770 Zinc dependent phospholipase C (alpha toxin) BCAH820_0739 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BCAH820_0741 SM00530 Helix-turn-helix XRE-family like proteins BCAH820_0750 SM00530 Helix-turn-helix XRE-family like proteins BCAH820_0769 SM00899 BCAH820_0769 BCAH820_0797 SM00116 Domain in cystathionine beta-synthase and other proteins. BCAH820_0801 SM00287 Bacterial SH3 domain homologues BCAH820_0803 SM00382 ATPases associated with a variety of cellular activities BCAH820_0820 SM00347 helix_turn_helix multiple antibiotic resistance protein BCAH820_0843 SM00487 DEAD-like helicases superfamily BCAH820_0843 SM00490 helicase superfamily c-terminal domain BCAH820_0849 SM00857 Resolvase, N terminal domain BCAH820_0851 SM00530 Helix-turn-helix XRE-family like proteins BCAH820_0853 SM00857 Resolvase, N terminal domain BCAH820_0854 SM00857 Resolvase, N terminal domain BCAH820_0859 SM00487 DEAD-like helicases superfamily BCAH820_0859 SM00490 helicase superfamily c-terminal domain BCAH820_0868 SM00450 Rhodanese Homology Domain BCAH820_0870 SM00450 Rhodanese Homology Domain BCAH820_0871 SM00450 Rhodanese Homology Domain BCAH820_0871 SM00849 Metallo-beta-lactamase superfamily BCAH820_0873 SM00450 Rhodanese Homology Domain BCAH820_0874 SM00450 Rhodanese Homology Domain BCAH820_0879 SM00829 Enoylreductase BCAH820_0890 SM00567 E-Z type HEAT repeats BCAH820_0891 SM00287 Bacterial SH3 domain homologues BCAH820_0893 SM00382 ATPases associated with a variety of cellular activities BCAH820_0904 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen BCAH820_0925 SM00344 helix_turn_helix ASNC type BCAH820_0939 SM01060 BCAH820_0939 BCAH820_0945 SM00382 ATPases associated with a variety of cellular activities BCAH820_0946 SM00382 ATPases associated with a variety of cellular activities BCAH820_0947 SM00062 Bacterial periplasmic substrate-binding proteins BCAH820_0947 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BCAH820_0949 SM00382 ATPases associated with a variety of cellular activities BCAH820_0963 SM00644 BCAH820_0963 BCAH820_0964 SM00729 Elongator protein 3, MiaB family, Radical SAM BCAH820_0971 SM00957 SecA DEAD-like domain BCAH820_0971 SM00958 SecA preprotein cross-linking domain BCAH820_0986 SM00646 BCAH820_0986 BCAH820_0999 SM00382 ATPases associated with a variety of cellular activities BCAH820_1000 SM00382 ATPases associated with a variety of cellular activities BCAH820_1004 SM00091 PAS domain BCAH820_1004 SM00387 Histidine kinase-like ATPases BCAH820_1005 SM00448 cheY-homologous receiver domain BCAH820_1016 SM00507 HNH nucleases BCAH820_1021 SM00422 helix_turn_helix, mercury resistance BCAH820_1040 SM00347 helix_turn_helix multiple antibiotic resistance protein BCAH820_1049 SM01120 BCAH820_1049 BCAH820_1052 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BCAH820_1056 SM00460 Transglutaminase/protease-like homologues BCAH820_1070 SM00331 Sigma factor PP2C-like phosphatases BCAH820_1070 SM00448 cheY-homologous receiver domain BCAH820_1071 SM00138 Methyltransferase, chemotaxis proteins BCAH820_1072 SM00387 Histidine kinase-like ATPases BCAH820_1072 SM00388 His Kinase A (phosphoacceptor) domain BCAH820_1072 SM00448 cheY-homologous receiver domain BCAH820_1080 SM00829 Enoylreductase BCAH820_1087 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BCAH820_1096 SM00028 Tetratricopeptide repeats BCAH820_1103 SM00530 Helix-turn-helix XRE-family like proteins BCAH820_1113 SM00347 helix_turn_helix multiple antibiotic resistance protein BCAH820_1122 SM00347 helix_turn_helix multiple antibiotic resistance protein BCAH820_1125 SM00382 ATPases associated with a variety of cellular activities BCAH820_1146 SM00422 helix_turn_helix, mercury resistance BCAH820_1164 SM00354 helix_turn _helix lactose operon repressor BCAH820_1166 SM00849 Metallo-beta-lactamase superfamily BCAH820_1171 SM00382 ATPases associated with a variety of cellular activities BCAH820_1177 SM00725 NEAr Transporter domain BCAH820_1191 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BCAH820_1194 SM00342 helix_turn_helix, arabinose operon control protein BCAH820_1194 SM00871 Bacterial transcription activator, effector binding domain BCAH820_1197 SM00387 Histidine kinase-like ATPases BCAH820_1197 SM00388 His Kinase A (phosphoacceptor) domain BCAH820_1198 SM00448 cheY-homologous receiver domain BCAH820_1198 SM00862 Transcriptional regulatory protein, C terminal BCAH820_1213 SM00357 Cold shock protein domain BCAH820_1236 SM01060 BCAH820_1236 BCAH820_1238 SM00642 Alpha-amylase domain BCAH820_1239 SM00530 Helix-turn-helix XRE-family like proteins BCAH820_1241 SM00316 Ribosomal protein S1-like RNA-binding domain BCAH820_1250 SM00382 ATPases associated with a variety of cellular activities BCAH820_1250 SM01086 C-terminal, D2-small domain, of ClpB protein BCAH820_1256 SM00825 Beta-ketoacyl synthase BCAH820_1264 SM00382 ATPases associated with a variety of cellular activities BCAH820_1265 SM00382 ATPases associated with a variety of cellular activities BCAH820_1274 SM00155 Phospholipase D. Active site motifs. BCAH820_1280 SM01118 BCAH820_1280 BCAH820_1282 SM00954 Region found in RelA / SpoT proteins BCAH820_1313 SM00635 Bacterial Ig-like domain 2 BCAH820_1330 SM01324 BCAH820_1330 BCAH820_1340 SM00861 Transketolase, pyrimidine binding domain BCAH820_1341 SM00530 Helix-turn-helix XRE-family like proteins BCAH820_1371 SM00530 Helix-turn-helix XRE-family like proteins BCAH820_1375 SM00382 ATPases associated with a variety of cellular activities BCAH820_1379 SM00014 Acid phosphatase homologues BCAH820_1389 SM00448 cheY-homologous receiver domain BCAH820_1389 SM00862 Transcriptional regulatory protein, C terminal BCAH820_1390 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCAH820_1390 SM00387 Histidine kinase-like ATPases BCAH820_1390 SM00388 His Kinase A (phosphoacceptor) domain BCAH820_1391 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCAH820_1391 SM00895 BCAH820_1391 BCAH820_1405 SM00822 BCAH820_1405 BCAH820_1412 SM00382 ATPases associated with a variety of cellular activities BCAH820_1417 SM00420 helix_turn_helix, Deoxyribose operon repressor BCAH820_1417 SM01134 BCAH820_1417 BCAH820_1419 SM00365 Leucine-rich repeat, SDS22-like subfamily BCAH820_1419 SM00369 Leucine-rich repeats, typical (most populated) subfamily BCAH820_1419 SM00725 NEAr Transporter domain BCAH820_1420 SM01007 Class II Aldolase and Adducin N-terminal domain BCAH820_1424 SM00387 Histidine kinase-like ATPases BCAH820_1424 SM00388 His Kinase A (phosphoacceptor) domain BCAH820_1425 SM00347 helix_turn_helix multiple antibiotic resistance protein BCAH820_1429 SM00387 Histidine kinase-like ATPases BCAH820_1429 SM00388 His Kinase A (phosphoacceptor) domain BCAH820_1442 SM00465 GIY-YIG type nucleases (URI domain) BCAH820_1442 SM00496 Intron-encoded nuclease repeat 2 BCAH820_1445 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCAH820_1446 SM00382 ATPases associated with a variety of cellular activities BCAH820_1448 SM00382 ATPases associated with a variety of cellular activities BCAH820_1452 SM00344 helix_turn_helix ASNC type BCAH820_1477 SM00347 helix_turn_helix multiple antibiotic resistance protein BCAH820_1491 SM00917 LeuA allosteric (dimerisation) domain BCAH820_1492 SM01329 BCAH820_1492 BCAH820_1530 SM00387 Histidine kinase-like ATPases BCAH820_1531 SM00421 helix_turn_helix, Lux Regulon BCAH820_1531 SM00448 cheY-homologous receiver domain BCAH820_1550 SM00091 PAS domain BCAH820_1550 SM00387 Histidine kinase-like ATPases BCAH820_1550 SM00388 His Kinase A (phosphoacceptor) domain BCAH820_1554 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCAH820_1554 SM00387 Histidine kinase-like ATPases BCAH820_1554 SM00388 His Kinase A (phosphoacceptor) domain BCAH820_1565 SM00363 S4 RNA-binding domain BCAH820_1569 SM00448 cheY-homologous receiver domain BCAH820_1569 SM00862 Transcriptional regulatory protein, C terminal BCAH820_1570 SM00091 PAS domain BCAH820_1570 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCAH820_1570 SM00387 Histidine kinase-like ATPases BCAH820_1570 SM00388 His Kinase A (phosphoacceptor) domain BCAH820_1572 SM00257 Lysin motif BCAH820_1579 SM00487 DEAD-like helicases superfamily BCAH820_1579 SM00490 helicase superfamily c-terminal domain BCAH820_1581 SM00257 Lysin motif BCAH820_1583 SM00422 helix_turn_helix, mercury resistance BCAH820_1585 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BCAH820_1588 SM00644 BCAH820_1588 BCAH820_1590 SM00870 BCAH820_1590 BCAH820_1592 SM00316 Ribosomal protein S1-like RNA-binding domain BCAH820_1593 SM01240 BCAH820_1593 BCAH820_1604 SM00411 bacterial (prokaryotic) histone like domain BCAH820_1609 SM00562 BCAH820_1609 BCAH820_1613 SM00028 Tetratricopeptide repeats BCAH820_1614 SM00914 BCAH820_1614 BCAH820_1623 SM00986 Uracil DNA glycosylase superfamily BCAH820_1623 SM00987 UreE urease accessory protein, C-terminal domain BCAH820_1627 SM00851 MGS-like domain BCAH820_1636 SM00479 BCAH820_1636 BCAH820_1636 SM00491 BCAH820_1636 BCAH820_1641 SM00478 endonuclease III BCAH820_1641 SM00525 BCAH820_1641 BCAH820_1643 SM00060 Fibronectin type 3 domain BCAH820_1654 SM00981 BCAH820_1654 BCAH820_1656 SM00491 BCAH820_1656 BCAH820_1669 SM00450 Rhodanese Homology Domain BCAH820_1675 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BCAH820_1675 SM00475 5'-3' exonuclease BCAH820_1697 SM00357 Cold shock protein domain BCAH820_1707 SM00849 Metallo-beta-lactamase superfamily BCAH820_1708 SM00422 helix_turn_helix, mercury resistance BCAH820_1708 SM00871 Bacterial transcription activator, effector binding domain BCAH820_1727 SM00448 cheY-homologous receiver domain BCAH820_1728 SM00073 Histidine Phosphotransfer domain BCAH820_1728 SM00260 Two component signalling adaptor domain BCAH820_1728 SM00387 Histidine kinase-like ATPases BCAH820_1728 SM01231 BCAH820_1728 BCAH820_1732 SM00138 Methyltransferase, chemotaxis proteins BCAH820_1747 SM00382 ATPases associated with a variety of cellular activities BCAH820_1754 SM00260 Two component signalling adaptor domain BCAH820_1754 SM00448 cheY-homologous receiver domain BCAH820_1768 SM00382 ATPases associated with a variety of cellular activities BCAH820_1768 SM00962 SRP54-type protein, GTPase domain BCAH820_1770 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BCAH820_1781 SM00530 Helix-turn-helix XRE-family like proteins BCAH820_1785 SM00382 ATPases associated with a variety of cellular activities BCAH820_1788 SM00849 Metallo-beta-lactamase superfamily BCAH820_1788 SM01027 Beta-Casp domain BCAH820_1792 SM00835 Cupin BCAH820_1795 SM00855 Phosphoglycerate mutase family BCAH820_1799 SM00347 helix_turn_helix multiple antibiotic resistance protein BCAH820_1808 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCAH820_1808 SM00895 BCAH820_1808 BCAH820_1810 SM00833 Cobalamin synthesis protein cobW C-terminal domain BCAH820_1817 SM00422 helix_turn_helix, mercury resistance BCAH820_1831 SM00530 Helix-turn-helix XRE-family like proteins BCAH820_1839 SM00421 helix_turn_helix, Lux Regulon BCAH820_1839 SM00448 cheY-homologous receiver domain BCAH820_1841 SM00382 ATPases associated with a variety of cellular activities BCAH820_1844 SM00155 Phospholipase D. Active site motifs. BCAH820_1848 SM00919 Malic enzyme, NAD binding domain BCAH820_1848 SM01274 BCAH820_1848 BCAH820_1849 SM00387 Histidine kinase-like ATPases BCAH820_1850 SM00448 cheY-homologous receiver domain BCAH820_1851 SM00487 DEAD-like helicases superfamily BCAH820_1851 SM00490 helicase superfamily c-terminal domain BCAH820_1862 SM00646 BCAH820_1862 BCAH820_1863 SM00047 Lysozyme subfamily 2 BCAH820_1893 SM00854 Bacterial capsule synthesis protein PGA_cap BCAH820_1899 SM00850 LytTr DNA-binding domain BCAH820_1910 SM00729 Elongator protein 3, MiaB family, Radical SAM BCAH820_1912 SM00448 cheY-homologous receiver domain BCAH820_1912 SM00862 Transcriptional regulatory protein, C terminal BCAH820_1913 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCAH820_1913 SM00387 Histidine kinase-like ATPases BCAH820_1913 SM00388 His Kinase A (phosphoacceptor) domain BCAH820_1916 SM00450 Rhodanese Homology Domain BCAH820_1927 SM01133 BCAH820_1927 BCAH820_1929 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BCAH820_1936 SM01011 Aminopeptidase P, N-terminal domain BCAH820_1938 SM00287 Bacterial SH3 domain homologues BCAH820_1940 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BCAH820_1940 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BCAH820_1940 SM00493 BCAH820_1940 BCAH820_1961 SM00833 Cobalamin synthesis protein cobW C-terminal domain BCAH820_1968 SM00382 ATPases associated with a variety of cellular activities BCAH820_1969 SM00382 ATPases associated with a variety of cellular activities BCAH820_1976 SM00347 helix_turn_helix multiple antibiotic resistance protein BCAH820_1980 SM00382 ATPases associated with a variety of cellular activities BCAH820_1981 SM00382 ATPases associated with a variety of cellular activities BCAH820_1988 SM00287 Bacterial SH3 domain homologues BCAH820_1990 SM00382 ATPases associated with a variety of cellular activities BCAH820_1991 SM00448 cheY-homologous receiver domain BCAH820_1991 SM00862 Transcriptional regulatory protein, C terminal BCAH820_1993 SM00387 Histidine kinase-like ATPases BCAH820_1993 SM00388 His Kinase A (phosphoacceptor) domain BCAH820_2010 SM00448 cheY-homologous receiver domain BCAH820_2010 SM00862 Transcriptional regulatory protein, C terminal BCAH820_2011 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCAH820_2011 SM00387 Histidine kinase-like ATPases BCAH820_2011 SM00388 His Kinase A (phosphoacceptor) domain BCAH820_2028 SM00460 Transglutaminase/protease-like homologues BCAH820_2034 SM00966 SpoVT / AbrB like domain BCAH820_2036 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCAH820_2043 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BCAH820_2043 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCAH820_2056 SM00833 Cobalamin synthesis protein cobW C-terminal domain BCAH820_2076 SM00855 Phosphoglycerate mutase family BCAH820_2087 SM00155 Phospholipase D. Active site motifs. BCAH820_2092 SM01091 Transporter associated domain BCAH820_2106 SM00244 prohibitin homologues BCAH820_2107 SM00855 Phosphoglycerate mutase family BCAH820_2110 SM01005 Alanine racemase, C-terminal domain BCAH820_2116 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCAH820_2143 SM00487 DEAD-like helicases superfamily BCAH820_2143 SM00490 helicase superfamily c-terminal domain BCAH820_2147 SM00829 Enoylreductase BCAH820_2152 SM00849 Metallo-beta-lactamase superfamily BCAH820_2155 SM00460 Transglutaminase/protease-like homologues BCAH820_2158 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BCAH820_2162 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCAH820_2163 SM00382 ATPases associated with a variety of cellular activities BCAH820_2165 SM00100 Cyclic nucleotide-monophosphate binding domain BCAH820_2165 SM00419 helix_turn_helix, cAMP Regulatory protein BCAH820_2166 SM00729 Elongator protein 3, MiaB family, Radical SAM BCAH820_2168 SM00852 Probable molybdopterin binding domain BCAH820_2180 SM00894 Excalibur calcium-binding domain BCAH820_2189 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BCAH820_2190 SM00382 ATPases associated with a variety of cellular activities BCAH820_2194 SM00567 E-Z type HEAT repeats BCAH820_2194 SM00932 Scaffold protein Nfu/NifU N terminal BCAH820_2198 SM00836 DALR anticodon binding domain BCAH820_2198 SM01016 Arginyl tRNA synthetase N terminal dom BCAH820_2200 SM00028 Tetratricopeptide repeats BCAH820_2206 SM00327 von Willebrand factor (vWF) type A domain BCAH820_2209 SM00382 ATPases associated with a variety of cellular activities BCAH820_2211 SM00028 Tetratricopeptide repeats BCAH820_2221 SM00860 SMI1 / KNR4 family BCAH820_2222 SM00857 Resolvase, N terminal domain BCAH820_2240 SM00448 cheY-homologous receiver domain BCAH820_2240 SM00862 Transcriptional regulatory protein, C terminal BCAH820_2241 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCAH820_2241 SM00387 Histidine kinase-like ATPases BCAH820_2241 SM00388 His Kinase A (phosphoacceptor) domain BCAH820_2256 SM00382 ATPases associated with a variety of cellular activities BCAH820_2267 SM00563 Phosphate acyltransferases BCAH820_2289 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BCAH820_2290 SM00421 helix_turn_helix, Lux Regulon BCAH820_2290 SM00448 cheY-homologous receiver domain BCAH820_2293 SM00829 Enoylreductase BCAH820_2305 SM00382 ATPases associated with a variety of cellular activities BCAH820_2313 SM01091 Transporter associated domain BCAH820_2316 SM00387 Histidine kinase-like ATPases BCAH820_2316 SM00388 His Kinase A (phosphoacceptor) domain BCAH820_2320 SM00882 Coenzyme A transferase BCAH820_2321 SM00882 Coenzyme A transferase BCAH820_2324 SM00382 ATPases associated with a variety of cellular activities BCAH820_2332 SM00219 Tyrosine kinase, catalytic domain BCAH820_2335 SM00014 Acid phosphatase homologues BCAH820_2338 SM00860 SMI1 / KNR4 family BCAH820_2343 SM00530 Helix-turn-helix XRE-family like proteins BCAH820_2354 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. BCAH820_2382 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCAH820_2390 SM00823 Phosphopantetheine attachment site BCAH820_2390 SM00824 Thioesterase BCAH820_2391 SM00923 MbtH-like protein BCAH820_2395 SM00411 bacterial (prokaryotic) histone like domain BCAH820_2403 SM00363 S4 RNA-binding domain BCAH820_2405 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BCAH820_2406 SM00382 ATPases associated with a variety of cellular activities BCAH820_2414 SM00849 Metallo-beta-lactamase superfamily BCAH820_2419 SM00100 Cyclic nucleotide-monophosphate binding domain BCAH820_2422 SM00849 Metallo-beta-lactamase superfamily BCAH820_2426 SM01059 Chloramphenicol acetyltransferase BCAH820_2432 SM00530 Helix-turn-helix XRE-family like proteins BCAH820_2440 SM00357 Cold shock protein domain BCAH820_2452 SM00859 Semialdehyde dehydrogenase, NAD binding domain BCAH820_2459 SM00382 ATPases associated with a variety of cellular activities BCAH820_2460 SM00382 ATPases associated with a variety of cellular activities BCAH820_2461 SM00646 BCAH820_2461 BCAH820_2463 SM00530 Helix-turn-helix XRE-family like proteins BCAH820_2468 SM00835 Cupin BCAH820_2469 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BCAH820_2484 SM01207 BCAH820_2484 BCAH820_2493 SM00849 Metallo-beta-lactamase superfamily BCAH820_2496 SM00487 DEAD-like helicases superfamily BCAH820_2496 SM00490 helicase superfamily c-terminal domain BCAH820_2503 SM00382 ATPases associated with a variety of cellular activities BCAH820_2508 SM00347 helix_turn_helix multiple antibiotic resistance protein BCAH820_2509 SM00855 Phosphoglycerate mutase family BCAH820_2523 SM00014 Acid phosphatase homologues BCAH820_2524 SM00354 helix_turn _helix lactose operon repressor BCAH820_2539 SM00530 Helix-turn-helix XRE-family like proteins BCAH820_2543 SM00646 BCAH820_2543 BCAH820_2546 SM00382 ATPases associated with a variety of cellular activities BCAH820_2548 SM00052 Putative diguanylate phosphodiesterase BCAH820_2548 SM00091 PAS domain BCAH820_2548 SM00267 diguanylate cyclase BCAH820_2552 SM00450 Rhodanese Homology Domain BCAH820_2552 SM00849 Metallo-beta-lactamase superfamily BCAH820_2555 SM00382 ATPases associated with a variety of cellular activities BCAH820_2561 SM00878 Biotin carboxylase C-terminal domain BCAH820_2573 SM00387 Histidine kinase-like ATPases BCAH820_2573 SM00388 His Kinase A (phosphoacceptor) domain BCAH820_2574 SM00448 cheY-homologous receiver domain BCAH820_2574 SM00862 Transcriptional regulatory protein, C terminal BCAH820_2588 SM00422 helix_turn_helix, mercury resistance BCAH820_2588 SM00871 Bacterial transcription activator, effector binding domain BCAH820_2599 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCAH820_2614 SM00448 cheY-homologous receiver domain BCAH820_2614 SM00862 Transcriptional regulatory protein, C terminal BCAH820_2615 SM00387 Histidine kinase-like ATPases BCAH820_2617 SM00382 ATPases associated with a variety of cellular activities BCAH820_2620 SM00382 ATPases associated with a variety of cellular activities BCAH820_2626 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCAH820_2627 SM01209 BCAH820_2627 BCAH820_2653 SM00091 PAS domain BCAH820_2653 SM00387 Histidine kinase-like ATPases BCAH820_2653 SM00388 His Kinase A (phosphoacceptor) domain BCAH820_2658 SM00382 ATPases associated with a variety of cellular activities BCAH820_2661 SM00387 Histidine kinase-like ATPases BCAH820_2661 SM00388 His Kinase A (phosphoacceptor) domain BCAH820_2664 SM00829 Enoylreductase BCAH820_2665 SM00014 Acid phosphatase homologues BCAH820_2666 SM00740 BCAH820_2666 BCAH820_2678 SM00422 helix_turn_helix, mercury resistance BCAH820_2685 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCAH820_2699 SM00480 DNA polymerase III beta subunit BCAH820_2719 SM00465 GIY-YIG type nucleases (URI domain) BCAH820_2737 SM00642 Alpha-amylase domain BCAH820_2741 SM00871 Bacterial transcription activator, effector binding domain BCAH820_2745 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCAH820_2768 SM00382 ATPases associated with a variety of cellular activities BCAH820_2772 SM00420 helix_turn_helix, Deoxyribose operon repressor BCAH820_2772 SM01134 BCAH820_2772 BCAH820_2779 SM00861 Transketolase, pyrimidine binding domain BCAH820_2793 SM00116 Domain in cystathionine beta-synthase and other proteins. BCAH820_2793 SM00382 ATPases associated with a variety of cellular activities BCAH820_2800 SM00060 Fibronectin type 3 domain BCAH820_2800 SM00495 Chitin-binding domain type 3 BCAH820_2811 SM00849 Metallo-beta-lactamase superfamily BCAH820_2825 SM00341 Helicase and RNase D C-terminal BCAH820_2825 SM00487 DEAD-like helicases superfamily BCAH820_2825 SM00490 helicase superfamily c-terminal domain BCAH820_2825 SM00956 BCAH820_2825 BCAH820_2832 SM01131 BCAH820_2832 BCAH820_2838 SM01130 BCAH820_2838 BCAH820_2842 SM00091 PAS domain BCAH820_2842 SM00382 ATPases associated with a variety of cellular activities BCAH820_2856 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BCAH820_2865 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BCAH820_2866 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCAH820_2866 SM00387 Histidine kinase-like ATPases BCAH820_2866 SM00388 His Kinase A (phosphoacceptor) domain BCAH820_2867 SM00448 cheY-homologous receiver domain BCAH820_2867 SM00862 Transcriptional regulatory protein, C terminal BCAH820_2907 SM00382 ATPases associated with a variety of cellular activities BCAH820_2908 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCAH820_2920 SM00062 Bacterial periplasmic substrate-binding proteins BCAH820_2921 SM00382 ATPases associated with a variety of cellular activities BCAH820_2927 SM00028 Tetratricopeptide repeats BCAH820_2947 SM00382 ATPases associated with a variety of cellular activities BCAH820_2957 SM00830 Chorismate mutase type II BCAH820_2964 SM00287 Bacterial SH3 domain homologues BCAH820_2975 SM00382 ATPases associated with a variety of cellular activities BCAH820_2979 SM01133 BCAH820_2979 BCAH820_2985 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCAH820_2989 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BCAH820_2995 SM00346 helix_turn_helix isocitrate lyase regulation BCAH820_2999 SM00098 Alkaline phosphatase homologues BCAH820_3001 SM00530 Helix-turn-helix XRE-family like proteins BCAH820_3006 SM00850 LytTr DNA-binding domain BCAH820_3024 SM01060 BCAH820_3024 BCAH820_3029 SM00860 SMI1 / KNR4 family BCAH820_3032 SM00347 helix_turn_helix multiple antibiotic resistance protein BCAH820_3033 SM00889 Elongation factor G, domain IV BCAH820_3047 SM00855 Phosphoglycerate mutase family BCAH820_3050 SM00422 helix_turn_helix, mercury resistance BCAH820_3061 SM00382 ATPases associated with a variety of cellular activities BCAH820_3062 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCAH820_3064 SM00382 ATPases associated with a variety of cellular activities BCAH820_3069 SM00342 helix_turn_helix, arabinose operon control protein BCAH820_3069 SM00871 Bacterial transcription activator, effector binding domain BCAH820_3074 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCAH820_3101 SM00797 Allophanate hydrolase subunit 2 BCAH820_3102 SM00796 Allophanate hydrolase subunit 1 BCAH820_3103 SM00346 helix_turn_helix isocitrate lyase regulation BCAH820_3107 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCAH820_3121 SM00849 Metallo-beta-lactamase superfamily BCAH820_3136 SM00870 BCAH820_3136 BCAH820_3137 SM00530 Helix-turn-helix XRE-family like proteins BCAH820_3143 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BCAH820_3143 SM00091 PAS domain BCAH820_3143 SM00387 Histidine kinase-like ATPases BCAH820_3143 SM00388 His Kinase A (phosphoacceptor) domain BCAH820_3148 SM00342 helix_turn_helix, arabinose operon control protein BCAH820_3162 SM00448 cheY-homologous receiver domain BCAH820_3163 SM00387 Histidine kinase-like ATPases BCAH820_3172 SM01060 BCAH820_3172 BCAH820_3201 SM00226 Low molecular weight phosphatase family BCAH820_3204 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCAH820_3208 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCAH820_3208 SM00387 Histidine kinase-like ATPases BCAH820_3208 SM00388 His Kinase A (phosphoacceptor) domain BCAH820_3209 SM00448 cheY-homologous receiver domain BCAH820_3209 SM00862 Transcriptional regulatory protein, C terminal BCAH820_3214 SM00344 helix_turn_helix ASNC type BCAH820_3221 SM00342 helix_turn_helix, arabinose operon control protein BCAH820_3228 SM00347 helix_turn_helix multiple antibiotic resistance protein BCAH820_3235 SM00448 cheY-homologous receiver domain BCAH820_3235 SM00862 Transcriptional regulatory protein, C terminal BCAH820_3236 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCAH820_3236 SM00387 Histidine kinase-like ATPases BCAH820_3236 SM00388 His Kinase A (phosphoacceptor) domain BCAH820_3246 SM00849 Metallo-beta-lactamase superfamily BCAH820_3253 SM00382 ATPases associated with a variety of cellular activities BCAH820_3255 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCAH820_3257 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCAH820_3257 SM00387 Histidine kinase-like ATPases BCAH820_3257 SM00388 His Kinase A (phosphoacceptor) domain BCAH820_3258 SM00448 cheY-homologous receiver domain BCAH820_3258 SM00862 Transcriptional regulatory protein, C terminal BCAH820_3274 SM00354 helix_turn _helix lactose operon repressor BCAH820_3275 SM00028 Tetratricopeptide repeats BCAH820_3282 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BCAH820_3282 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCAH820_3282 SM00319 Homologues of the ligand binding domain of Tar BCAH820_3294 SM00344 helix_turn_helix ASNC type BCAH820_3306 SM00342 helix_turn_helix, arabinose operon control protein BCAH820_3311 SM00287 Bacterial SH3 domain homologues BCAH820_3311 SM00644 BCAH820_3311 BCAH820_3321 SM00347 helix_turn_helix multiple antibiotic resistance protein BCAH820_3337 SM00382 ATPases associated with a variety of cellular activities BCAH820_3347 SM00530 Helix-turn-helix XRE-family like proteins BCAH820_3362 SM00382 ATPases associated with a variety of cellular activities BCAH820_3365 SM00530 Helix-turn-helix XRE-family like proteins BCAH820_3377 SM01266 BCAH820_3377 BCAH820_3387 SM00028 Tetratricopeptide repeats BCAH820_3391 SM01091 Transporter associated domain BCAH820_3392 SM00422 helix_turn_helix, mercury resistance BCAH820_3400 SM01350 BCAH820_3400 BCAH820_3401 SM00861 Transketolase, pyrimidine binding domain BCAH820_3406 SM00829 Enoylreductase BCAH820_3409 SM01276 BCAH820_3409 BCAH820_3418 SM00914 BCAH820_3418 BCAH820_3424 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCAH820_3424 SM00866 BCAH820_3424 BCAH820_3431 SM00849 Metallo-beta-lactamase superfamily BCAH820_3442 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCAH820_3443 SM00636 BCAH820_3443 BCAH820_3450 SM00871 Bacterial transcription activator, effector binding domain BCAH820_3454 SM00382 ATPases associated with a variety of cellular activities BCAH820_3460 SM00849 Metallo-beta-lactamase superfamily BCAH820_3474 SM00849 Metallo-beta-lactamase superfamily BCAH820_3476 SM00829 Enoylreductase BCAH820_3501 SM00829 Enoylreductase BCAH820_3502 SM00855 Phosphoglycerate mutase family BCAH820_3504 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BCAH820_3504 SM00534 ATPase domain of DNA mismatch repair MUTS family BCAH820_3508 SM00642 Alpha-amylase domain BCAH820_3521 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCAH820_3522 SM00829 Enoylreductase BCAH820_3524 SM00028 Tetratricopeptide repeats BCAH820_3538 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BCAH820_3547 SM00479 BCAH820_3547 BCAH820_3548 SM00357 Cold shock protein domain BCAH820_3553 SM01022 BCAH820_3553 BCAH820_3574 SM00852 Probable molybdopterin binding domain BCAH820_3577 SM00729 Elongator protein 3, MiaB family, Radical SAM BCAH820_3581 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BCAH820_3581 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BCAH820_3604 SM00382 ATPases associated with a variety of cellular activities BCAH820_3607 SM00434 DNA Topoisomerase IV BCAH820_3608 SM00387 Histidine kinase-like ATPases BCAH820_3608 SM00433 TopoisomeraseII BCAH820_3610 SM00881 CoA binding domain BCAH820_3611 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BCAH820_3612 SM00448 cheY-homologous receiver domain BCAH820_3612 SM00862 Transcriptional regulatory protein, C terminal BCAH820_3615 SM01207 BCAH820_3615 BCAH820_3618 SM00257 Lysin motif BCAH820_3618 SM00636 BCAH820_3618 BCAH820_3622 SM00479 BCAH820_3622 BCAH820_3626 SM00382 ATPases associated with a variety of cellular activities BCAH820_3635 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BCAH820_3648 SM00644 BCAH820_3648 BCAH820_3648 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. BCAH820_3649 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BCAH820_3652 SM00091 PAS domain BCAH820_3652 SM00387 Histidine kinase-like ATPases BCAH820_3652 SM00388 His Kinase A (phosphoacceptor) domain BCAH820_3658 SM01058 CarD-like/TRCF domain BCAH820_3683 SM00382 ATPases associated with a variety of cellular activities BCAH820_3692 SM00644 BCAH820_3692 BCAH820_3695 SM00382 ATPases associated with a variety of cellular activities BCAH820_3696 SM00382 ATPases associated with a variety of cellular activities BCAH820_3699 SM00861 Transketolase, pyrimidine binding domain BCAH820_3703 SM00382 ATPases associated with a variety of cellular activities BCAH820_3704 SM00062 Bacterial periplasmic substrate-binding proteins BCAH820_3707 SM00857 Resolvase, N terminal domain BCAH820_3713 SM01230 BCAH820_3713 BCAH820_3714 SM00422 helix_turn_helix, mercury resistance BCAH820_3719 SM00382 ATPases associated with a variety of cellular activities BCAH820_3725 SM00287 Bacterial SH3 domain homologues BCAH820_3728 SM00420 helix_turn_helix, Deoxyribose operon repressor BCAH820_3728 SM01134 BCAH820_3728 BCAH820_3740 SM00411 bacterial (prokaryotic) histone like domain BCAH820_3746 SM00382 ATPases associated with a variety of cellular activities BCAH820_3751 SM00342 helix_turn_helix, arabinose operon control protein BCAH820_3753 SM00478 endonuclease III BCAH820_3761 SM00052 Putative diguanylate phosphodiesterase BCAH820_3761 SM00091 PAS domain BCAH820_3761 SM00267 diguanylate cyclase BCAH820_3767 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCAH820_3771 SM00148 Phospholipase C, catalytic domain (part); domain X BCAH820_3774 SM00257 Lysin motif BCAH820_3780 SM00853 MutL C terminal dimerisation domain BCAH820_3780 SM01340 BCAH820_3780 BCAH820_3781 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BCAH820_3781 SM00534 ATPase domain of DNA mismatch repair MUTS family BCAH820_3784 SM00729 Elongator protein 3, MiaB family, Radical SAM BCAH820_3790 SM00322 K homology RNA-binding domain BCAH820_3790 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BCAH820_3792 SM00382 ATPases associated with a variety of cellular activities BCAH820_3793 SM00852 Probable molybdopterin binding domain BCAH820_3803 SM00382 ATPases associated with a variety of cellular activities BCAH820_3805 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCAH820_3805 SM00866 BCAH820_3805 BCAH820_3806 SM00382 ATPases associated with a variety of cellular activities BCAH820_3806 SM00843 BCAH820_3806 BCAH820_3809 SM00849 Metallo-beta-lactamase superfamily BCAH820_3810 SM01130 BCAH820_3810 BCAH820_3812 SM00859 Semialdehyde dehydrogenase, NAD binding domain BCAH820_3818 SM00316 Ribosomal protein S1-like RNA-binding domain BCAH820_3818 SM00322 K homology RNA-binding domain BCAH820_3819 SM01387 BCAH820_3819 BCAH820_3820 SM00904 Riboflavin kinase BCAH820_3828 SM00316 Ribosomal protein S1-like RNA-binding domain BCAH820_3828 SM00322 K homology RNA-binding domain BCAH820_3830 SM00479 BCAH820_3830 BCAH820_3830 SM00481 DNA polymerase alpha chain like domain BCAH820_3832 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BCAH820_3841 SM00382 ATPases associated with a variety of cellular activities BCAH820_3841 SM01086 C-terminal, D2-small domain, of ClpB protein BCAH820_3845 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BCAH820_3845 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BCAH820_3845 SM00493 BCAH820_3845 BCAH820_3847 SM00881 CoA binding domain BCAH820_3859 SM00382 ATPases associated with a variety of cellular activities BCAH820_3859 SM00962 SRP54-type protein, GTPase domain BCAH820_3859 SM00963 SRP54-type protein, helical bundle domain BCAH820_3861 SM00382 ATPases associated with a variety of cellular activities BCAH820_3861 SM00962 SRP54-type protein, GTPase domain BCAH820_3861 SM00963 SRP54-type protein, helical bundle domain BCAH820_3862 SM00968 SMC proteins Flexible Hinge Domain BCAH820_3863 SM00358 Double-stranded RNA binding motif BCAH820_3863 SM00535 Ribonuclease III family BCAH820_3865 SM00822 BCAH820_3865 BCAH820_3866 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BCAH820_3869 SM00487 DEAD-like helicases superfamily BCAH820_3869 SM00490 helicase superfamily c-terminal domain BCAH820_3870 SM01120 BCAH820_3870 BCAH820_3870 SM01121 BCAH820_3870 BCAH820_3873 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain BCAH820_3876 SM00220 Serine/Threonine protein kinases, catalytic domain BCAH820_3876 SM00740 BCAH820_3876 BCAH820_3877 SM00331 Sigma factor PP2C-like phosphatases BCAH820_3877 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BCAH820_3882 SM00487 DEAD-like helicases superfamily BCAH820_3882 SM00490 helicase superfamily c-terminal domain BCAH820_3884 SM01409 BCAH820_3884 BCAH820_3885 SM00072 Guanylate kinase homologues. BCAH820_3888 SM00831 Cation transporter/ATPase, N-terminus BCAH820_3897 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BCAH820_3900 SM00851 MGS-like domain BCAH820_3900 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BCAH820_3900 SM01209 BCAH820_3900 BCAH820_3901 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BCAH820_3906 SM00363 S4 RNA-binding domain BCAH820_3911 SM00363 S4 RNA-binding domain BCAH820_3921 SM00864 Tubulin/FtsZ family, GTPase domain BCAH820_3921 SM00865 Tubulin/FtsZ family, C-terminal domain BCAH820_3922 SM00842 Cell division protein FtsA BCAH820_3930 SM00740 BCAH820_3930 BCAH820_3931 SM00740 BCAH820_3931 BCAH820_3937 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains BCAH820_3941 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BCAH820_3949 SM00855 Phosphoglycerate mutase family BCAH820_3962 SM00878 Biotin carboxylase C-terminal domain BCAH820_3966 SM00670 Large family of predicted nucleotide-binding domains BCAH820_3971 SM00838 Elongation factor G C-terminus BCAH820_3986 SM00861 Transketolase, pyrimidine binding domain BCAH820_3992 SM00849 Metallo-beta-lactamase superfamily BCAH820_4006 SM00052 Putative diguanylate phosphodiesterase BCAH820_4015 SM00267 diguanylate cyclase BCAH820_4025 SM00387 Histidine kinase-like ATPases BCAH820_4025 SM00388 His Kinase A (phosphoacceptor) domain BCAH820_4028 SM00354 helix_turn _helix lactose operon repressor BCAH820_4033 SM00642 Alpha-amylase domain BCAH820_4034 SM00642 Alpha-amylase domain BCAH820_4035 SM00382 ATPases associated with a variety of cellular activities BCAH820_4042 SM00382 ATPases associated with a variety of cellular activities BCAH820_4059 SM01007 Class II Aldolase and Adducin N-terminal domain BCAH820_4064 SM00267 diguanylate cyclase BCAH820_4071 SM01061 CAT RNA binding domain BCAH820_4073 SM00866 BCAH820_4073 BCAH820_4076 SM00849 Metallo-beta-lactamase superfamily BCAH820_4095 SM00387 Histidine kinase-like ATPases BCAH820_4097 SM00936 Penicillin-binding protein 5, C-terminal domain BCAH820_4098 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCAH820_4099 SM00382 ATPases associated with a variety of cellular activities BCAH820_4103 SM00347 helix_turn_helix multiple antibiotic resistance protein BCAH820_4109 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BCAH820_4128 SM00354 helix_turn _helix lactose operon repressor BCAH820_4132 SM00704 CDGSH-type zinc finger. Function unknown. BCAH820_4138 SM00729 Elongator protein 3, MiaB family, Radical SAM BCAH820_4138 SM00876 Biotin and Thiamin Synthesis associated domain BCAH820_4149 SM00347 helix_turn_helix multiple antibiotic resistance protein BCAH820_4156 SM00859 Semialdehyde dehydrogenase, NAD binding domain BCAH820_4159 SM00849 Metallo-beta-lactamase superfamily BCAH820_4164 SM00849 Metallo-beta-lactamase superfamily BCAH820_4172 SM00382 ATPases associated with a variety of cellular activities BCAH820_4174 SM00062 Bacterial periplasmic substrate-binding proteins BCAH820_4174 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BCAH820_4181 SM00861 Transketolase, pyrimidine binding domain BCAH820_4185 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BCAH820_4187 SM00091 PAS domain BCAH820_4187 SM00382 ATPases associated with a variety of cellular activities BCAH820_4192 SM00448 cheY-homologous receiver domain BCAH820_4193 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BCAH820_4196 SM00363 S4 RNA-binding domain BCAH820_4197 SM00861 Transketolase, pyrimidine binding domain BCAH820_4204 SM00878 Biotin carboxylase C-terminal domain BCAH820_4213 SM00382 ATPases associated with a variety of cellular activities BCAH820_4217 SM00841 Elongation factor P, C-terminal BCAH820_4217 SM01185 BCAH820_4217 BCAH820_4224 SM00529 Helix-turn-helix diphteria tox regulatory element BCAH820_4229 SM00450 Rhodanese Homology Domain BCAH820_4230 SM00354 helix_turn _helix lactose operon repressor BCAH820_4241 SM00382 ATPases associated with a variety of cellular activities BCAH820_4242 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCAH820_4248 SM00487 DEAD-like helicases superfamily BCAH820_4248 SM00490 helicase superfamily c-terminal domain BCAH820_4256 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. BCAH820_4264 SM00382 ATPases associated with a variety of cellular activities BCAH820_4274 SM01018 B12 binding domain BCAH820_4279 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCAH820_4281 SM00849 Metallo-beta-lactamase superfamily BCAH820_4289 SM00382 ATPases associated with a variety of cellular activities BCAH820_4303 SM00382 ATPases associated with a variety of cellular activities BCAH820_4306 SM00518 AP endonuclease family 2 BCAH820_4307 SM00487 DEAD-like helicases superfamily BCAH820_4307 SM00490 helicase superfamily c-terminal domain BCAH820_4315 SM00400 zinc finger BCAH820_4315 SM00493 BCAH820_4315 BCAH820_4315 SM00766 DNA primase DnaG DnaB-binding BCAH820_4319 SM00116 Domain in cystathionine beta-synthase and other proteins. BCAH820_4326 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BCAH820_4332 SM00729 Elongator protein 3, MiaB family, Radical SAM BCAH820_4335 SM00271 DnaJ molecular chaperone homology domain BCAH820_4339 SM00729 Elongator protein 3, MiaB family, Radical SAM BCAH820_4341 SM00838 Elongation factor G C-terminus BCAH820_4347 SM00849 Metallo-beta-lactamase superfamily BCAH820_4349 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BCAH820_4353 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BCAH820_4355 SM01103 BCAH820_4355 BCAH820_4364 SM00287 Bacterial SH3 domain homologues BCAH820_4371 SM00710 Parallel beta-helix repeats BCAH820_4388 SM00507 HNH nucleases BCAH820_4413 SM00530 Helix-turn-helix XRE-family like proteins BCAH820_4414 SM00530 Helix-turn-helix XRE-family like proteins BCAH820_4417 SM00857 Resolvase, N terminal domain BCAH820_4424 SM00954 Region found in RelA / SpoT proteins BCAH820_4426 SM00098 Alkaline phosphatase homologues BCAH820_4432 SM00855 Phosphoglycerate mutase family BCAH820_4442 SM00530 Helix-turn-helix XRE-family like proteins BCAH820_4447 SM00382 ATPases associated with a variety of cellular activities BCAH820_4466 SM00732 Likely ribonuclease with RNase H fold. BCAH820_4468 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BCAH820_4475 SM00028 Tetratricopeptide repeats BCAH820_4479 SM00382 ATPases associated with a variety of cellular activities BCAH820_4487 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BCAH820_4487 SM00954 Region found in RelA / SpoT proteins BCAH820_4496 SM01323 BCAH820_4496 BCAH820_4500 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BCAH820_4500 SM00382 ATPases associated with a variety of cellular activities BCAH820_4504 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCAH820_4507 SM00257 Lysin motif BCAH820_4517 SM00382 ATPases associated with a variety of cellular activities BCAH820_4518 SM00387 Histidine kinase-like ATPases BCAH820_4519 SM00448 cheY-homologous receiver domain BCAH820_4519 SM00862 Transcriptional regulatory protein, C terminal BCAH820_4521 SM01317 BCAH820_4521 BCAH820_4537 SM00422 helix_turn_helix, mercury resistance BCAH820_4547 SM00257 Lysin motif BCAH820_4549 SM01004 Delta-aminolevulinic acid dehydratase BCAH820_4554 SM00347 helix_turn_helix multiple antibiotic resistance protein BCAH820_4557 SM00382 ATPases associated with a variety of cellular activities BCAH820_4557 SM00464 Found in ATP-dependent protease La (LON) BCAH820_4558 SM00382 ATPases associated with a variety of cellular activities BCAH820_4559 SM00382 ATPases associated with a variety of cellular activities BCAH820_4559 SM00994 ClpX C4-type zinc finger BCAH820_4559 SM01086 C-terminal, D2-small domain, of ClpB protein BCAH820_4572 SM00909 Sporulation and spore germination BCAH820_4582 SM00857 Resolvase, N terminal domain BCAH820_4586 SM00857 Resolvase, N terminal domain BCAH820_4587 SM00857 Resolvase, N terminal domain BCAH820_4589 SM00530 Helix-turn-helix XRE-family like proteins BCAH820_4592 SM00530 Helix-turn-helix XRE-family like proteins BCAH820_4611 SM00382 ATPases associated with a variety of cellular activities BCAH820_4612 SM00382 ATPases associated with a variety of cellular activities BCAH820_4614 SM00342 helix_turn_helix, arabinose operon control protein BCAH820_4614 SM00448 cheY-homologous receiver domain BCAH820_4617 SM00530 Helix-turn-helix XRE-family like proteins BCAH820_4622 SM00382 ATPases associated with a variety of cellular activities BCAH820_4632 SM00465 GIY-YIG type nucleases (URI domain) BCAH820_4634 SM00893 Electron transfer flavoprotein domain BCAH820_4635 SM00893 Electron transfer flavoprotein domain BCAH820_4648 SM00382 ATPases associated with a variety of cellular activities BCAH820_4649 SM00387 Histidine kinase-like ATPases BCAH820_4649 SM00388 His Kinase A (phosphoacceptor) domain BCAH820_4650 SM00448 cheY-homologous receiver domain BCAH820_4650 SM00862 Transcriptional regulatory protein, C terminal BCAH820_4653 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BCAH820_4658 SM00382 ATPases associated with a variety of cellular activities BCAH820_4661 SM00725 NEAr Transporter domain BCAH820_4662 SM00725 NEAr Transporter domain BCAH820_4664 SM00363 S4 RNA-binding domain BCAH820_4665 SM00463 Small MutS-related domain BCAH820_4665 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BCAH820_4665 SM00534 ATPase domain of DNA mismatch repair MUTS family BCAH820_4666 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BCAH820_4666 SM00481 DNA polymerase alpha chain like domain BCAH820_4666 SM00483 DNA polymerase X family BCAH820_4674 SM00873 B3/4 domain BCAH820_4674 SM00874 tRNA synthetase B5 domain BCAH820_4674 SM00896 Ferredoxin-fold anticodon binding domain BCAH820_4676 SM00967 RNA 2'-O ribose methyltransferase substrate binding BCAH820_4691 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BCAH820_4693 SM00382 ATPases associated with a variety of cellular activities BCAH820_4698 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BCAH820_4701 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BCAH820_4701 SM01232 BCAH820_4701 BCAH820_4702 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BCAH820_4702 SM00474 3'-5' exonuclease BCAH820_4702 SM00475 5'-3' exonuclease BCAH820_4702 SM00482 DNA polymerase A domain BCAH820_4703 SM00091 PAS domain BCAH820_4703 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCAH820_4703 SM00387 Histidine kinase-like ATPases BCAH820_4703 SM00388 His Kinase A (phosphoacceptor) domain BCAH820_4704 SM00448 cheY-homologous receiver domain BCAH820_4704 SM00862 Transcriptional regulatory protein, C terminal BCAH820_4708 SM01329 BCAH820_4708 BCAH820_4717 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCAH820_4718 SM00919 Malic enzyme, NAD binding domain BCAH820_4718 SM01274 BCAH820_4718 BCAH820_4719 SM00481 DNA polymerase alpha chain like domain BCAH820_4727 SM00116 Domain in cystathionine beta-synthase and other proteins. BCAH820_4729 SM00849 Metallo-beta-lactamase superfamily BCAH820_4741 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BCAH820_4741 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BCAH820_4765 SM00981 BCAH820_4765 BCAH820_4773 SM00363 S4 RNA-binding domain BCAH820_4773 SM01390 BCAH820_4773 BCAH820_4776 SM00363 S4 RNA-binding domain BCAH820_4782 SM00116 Domain in cystathionine beta-synthase and other proteins. BCAH820_4786 SM00448 cheY-homologous receiver domain BCAH820_4786 SM00862 Transcriptional regulatory protein, C terminal BCAH820_4787 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCAH820_4787 SM00387 Histidine kinase-like ATPases BCAH820_4787 SM00388 His Kinase A (phosphoacceptor) domain BCAH820_4788 SM00248 ankyrin repeats BCAH820_4795 SM00354 helix_turn _helix lactose operon repressor BCAH820_4807 SM00843 BCAH820_4807 BCAH820_4815 SM00849 Metallo-beta-lactamase superfamily BCAH820_4819 SM00642 Alpha-amylase domain BCAH820_4822 SM00420 helix_turn_helix, Deoxyribose operon repressor BCAH820_4823 SM00363 S4 RNA-binding domain BCAH820_4828 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCAH820_4833 SM01058 CarD-like/TRCF domain BCAH820_4840 SM00852 Probable molybdopterin binding domain BCAH820_4843 SM00729 Elongator protein 3, MiaB family, Radical SAM BCAH820_4847 SM00450 Rhodanese Homology Domain BCAH820_4867 SM00382 ATPases associated with a variety of cellular activities BCAH820_4871 SM00729 Elongator protein 3, MiaB family, Radical SAM BCAH820_4880 SM00014 Acid phosphatase homologues BCAH820_4883 SM00852 Probable molybdopterin binding domain BCAH820_4894 SM00387 Histidine kinase-like ATPases BCAH820_4895 SM00387 Histidine kinase-like ATPases BCAH820_4895 SM00388 His Kinase A (phosphoacceptor) domain BCAH820_4901 SM00382 ATPases associated with a variety of cellular activities BCAH820_4912 SM00947 Carbonic anhydrase BCAH820_4913 SM01234 BCAH820_4913 BCAH820_4918 SM00894 Excalibur calcium-binding domain BCAH820_4929 SM00899 BCAH820_4929 BCAH820_4931 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCAH820_4931 SM00387 Histidine kinase-like ATPases BCAH820_4931 SM00388 His Kinase A (phosphoacceptor) domain BCAH820_4932 SM00448 cheY-homologous receiver domain BCAH820_4932 SM00862 Transcriptional regulatory protein, C terminal BCAH820_4938 SM00046 Diacylglycerol kinase catalytic domain (presumed) BCAH820_4946 SM00382 ATPases associated with a variety of cellular activities BCAH820_4947 SM00342 helix_turn_helix, arabinose operon control protein BCAH820_4947 SM00871 Bacterial transcription activator, effector binding domain BCAH820_4948 SM00448 cheY-homologous receiver domain BCAH820_4948 SM00862 Transcriptional regulatory protein, C terminal BCAH820_4949 SM00387 Histidine kinase-like ATPases BCAH820_4952 SM00382 ATPases associated with a variety of cellular activities BCAH820_4956 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCAH820_4956 SM00866 BCAH820_4956 BCAH820_4962 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCAH820_4962 SM00387 Histidine kinase-like ATPases BCAH820_4962 SM00388 His Kinase A (phosphoacceptor) domain BCAH820_4963 SM00448 cheY-homologous receiver domain BCAH820_4963 SM00862 Transcriptional regulatory protein, C terminal BCAH820_4964 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BCAH820_4972 SM00357 Cold shock protein domain BCAH820_4980 SM00642 Alpha-amylase domain BCAH820_5011 SM00316 Ribosomal protein S1-like RNA-binding domain BCAH820_5013 SM00344 helix_turn_helix ASNC type BCAH820_5020 SM01298 BCAH820_5020 BCAH820_5021 SM00479 BCAH820_5021 BCAH820_5039 SM00871 Bacterial transcription activator, effector binding domain BCAH820_5049 SM00382 ATPases associated with a variety of cellular activities BCAH820_5064 SM00420 helix_turn_helix, Deoxyribose operon repressor BCAH820_5071 SM00422 helix_turn_helix, mercury resistance BCAH820_5074 SM00855 Phosphoglycerate mutase family BCAH820_5076 SM00729 Elongator protein 3, MiaB family, Radical SAM BCAH820_5088 SM00382 ATPases associated with a variety of cellular activities BCAH820_5092 SM00382 ATPases associated with a variety of cellular activities BCAH820_5092 SM00930 BCAH820_5092 BCAH820_5096 SM00493 BCAH820_5096 BCAH820_5112 SM00530 Helix-turn-helix XRE-family like proteins BCAH820_5114 SM00849 Metallo-beta-lactamase superfamily BCAH820_5124 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BCAH820_5124 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCAH820_5139 SM00530 Helix-turn-helix XRE-family like proteins BCAH820_5144 SM00448 cheY-homologous receiver domain BCAH820_5144 SM00862 Transcriptional regulatory protein, C terminal BCAH820_5145 SM00387 Histidine kinase-like ATPases BCAH820_5145 SM00388 His Kinase A (phosphoacceptor) domain BCAH820_5149 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BCAH820_5149 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCAH820_5150 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BCAH820_5150 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCAH820_5154 SM00347 helix_turn_helix multiple antibiotic resistance protein BCAH820_5171 SM01276 BCAH820_5171 BCAH820_5172 SM01276 BCAH820_5172 BCAH820_5179 SM00363 S4 RNA-binding domain BCAH820_5183 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain BCAH820_5184 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BCAH820_5194 SM00382 ATPases associated with a variety of cellular activities BCAH820_5198 SM00448 cheY-homologous receiver domain BCAH820_5198 SM00862 Transcriptional regulatory protein, C terminal BCAH820_5199 SM00387 Histidine kinase-like ATPases BCAH820_5200 SM00448 cheY-homologous receiver domain BCAH820_5200 SM00862 Transcriptional regulatory protein, C terminal BCAH820_5201 SM00382 ATPases associated with a variety of cellular activities BCAH820_5204 SM00382 ATPases associated with a variety of cellular activities BCAH820_5214 SM00316 Ribosomal protein S1-like RNA-binding domain BCAH820_5214 SM00357 Cold shock protein domain BCAH820_5214 SM00955 BCAH820_5214 BCAH820_5220 SM01192 BCAH820_5220 BCAH820_5220 SM01193 BCAH820_5220 BCAH820_5224 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BCAH820_5244 SM00028 Tetratricopeptide repeats BCAH820_5252 SM00487 DEAD-like helicases superfamily BCAH820_5252 SM00490 helicase superfamily c-terminal domain BCAH820_5255 SM00422 helix_turn_helix, mercury resistance BCAH820_5261 SM00530 Helix-turn-helix XRE-family like proteins BCAH820_5264 SM00422 helix_turn_helix, mercury resistance BCAH820_5266 SM00382 ATPases associated with a variety of cellular activities BCAH820_5268 SM00382 ATPases associated with a variety of cellular activities BCAH820_5270 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BCAH820_5270 SM00245 tail specific protease BCAH820_5272 SM00382 ATPases associated with a variety of cellular activities BCAH820_5277 SM00957 SecA DEAD-like domain BCAH820_5277 SM00958 SecA preprotein cross-linking domain BCAH820_5280 SM00357 Cold shock protein domain BCAH820_5282 SM00487 DEAD-like helicases superfamily BCAH820_5282 SM00490 helicase superfamily c-terminal domain BCAH820_5290 SM00984 UDP binding domain BCAH820_5293 SM00382 ATPases associated with a variety of cellular activities BCAH820_5294 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. BCAH820_5324 SM00287 Bacterial SH3 domain homologues BCAH820_5330 SM00287 Bacterial SH3 domain homologues BCAH820_5336 SM00487 DEAD-like helicases superfamily BCAH820_5336 SM00490 helicase superfamily c-terminal domain BCAH820_5346 SM00382 ATPases associated with a variety of cellular activities BCAH820_5352 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCAH820_5352 SM00387 Histidine kinase-like ATPases BCAH820_5352 SM00388 His Kinase A (phosphoacceptor) domain BCAH820_5353 SM00448 cheY-homologous receiver domain BCAH820_5353 SM00862 Transcriptional regulatory protein, C terminal BCAH820_5360 SM00382 ATPases associated with a variety of cellular activities BCAH820_5362 SM00984 UDP binding domain BCAH820_5375 SM00382 ATPases associated with a variety of cellular activities BCAH820_5376 SM00850 LytTr DNA-binding domain BCAH820_5392 SM00052 Putative diguanylate phosphodiesterase BCAH820_5392 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BCAH820_5392 SM00091 PAS domain BCAH820_5392 SM00267 diguanylate cyclase BCAH820_5396 SM00382 ATPases associated with a variety of cellular activities BCAH820_5410 SM00226 Low molecular weight phosphatase family BCAH820_5413 SM00903 Flavin reductase like domain BCAH820_5421 SM00937 BCAH820_5421 BCAH820_5424 SM00357 Cold shock protein domain BCAH820_5424 SM00382 ATPases associated with a variety of cellular activities BCAH820_5424 SM00959 Rho termination factor, N-terminal domain BCAH820_5429 SM00448 cheY-homologous receiver domain BCAH820_5439 SM00155 Phospholipase D. Active site motifs. BCAH820_5441 SM00052 Putative diguanylate phosphodiesterase BCAH820_5441 SM00267 diguanylate cyclase BCAH820_5443 SM00530 Helix-turn-helix XRE-family like proteins BCAH820_5444 SM00421 helix_turn_helix, Lux Regulon BCAH820_5444 SM00448 cheY-homologous receiver domain BCAH820_5447 SM00382 ATPases associated with a variety of cellular activities BCAH820_5455 SM00836 DALR anticodon binding domain BCAH820_5455 SM01016 Arginyl tRNA synthetase N terminal dom BCAH820_5464 SM00422 helix_turn_helix, mercury resistance BCAH820_5471 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BCAH820_5473 SM00382 ATPases associated with a variety of cellular activities BCAH820_5484 SM00936 Penicillin-binding protein 5, C-terminal domain BCAH820_5493 SM00986 Uracil DNA glycosylase superfamily BCAH820_5493 SM00987 UreE urease accessory protein, C-terminal domain BCAH820_5495 SM00382 ATPases associated with a variety of cellular activities BCAH820_5497 SM00354 helix_turn _helix lactose operon repressor BCAH820_5504 SM00100 Cyclic nucleotide-monophosphate binding domain BCAH820_5506 SM00421 helix_turn_helix, Lux Regulon BCAH820_5506 SM00448 cheY-homologous receiver domain BCAH820_5507 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BCAH820_5509 SM00267 diguanylate cyclase BCAH820_5512 SM00448 cheY-homologous receiver domain BCAH820_5512 SM00850 LytTr DNA-binding domain BCAH820_5519 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BCAH820_5524 SM00382 ATPases associated with a variety of cellular activities BCAH820_5536 SM00448 cheY-homologous receiver domain BCAH820_5536 SM00850 LytTr DNA-binding domain BCAH820_5537 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BCAH820_5537 SM00387 Histidine kinase-like ATPases BCAH820_5548 SM00487 DEAD-like helicases superfamily BCAH820_5548 SM00490 helicase superfamily c-terminal domain BCAH820_5550 SM01240 BCAH820_5550 BCAH820_5553 SM00857 Resolvase, N terminal domain BCAH820_5554 SM00465 GIY-YIG type nucleases (URI domain) BCAH820_5555 SM00857 Resolvase, N terminal domain BCAH820_5563 SM00729 Elongator protein 3, MiaB family, Radical SAM BCAH820_5567 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BCAH820_5568 SM00849 Metallo-beta-lactamase superfamily BCAH820_5571 SM00091 PAS domain BCAH820_5571 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCAH820_5571 SM00387 Histidine kinase-like ATPases BCAH820_5571 SM00388 His Kinase A (phosphoacceptor) domain BCAH820_5572 SM00448 cheY-homologous receiver domain BCAH820_5572 SM00862 Transcriptional regulatory protein, C terminal BCAH820_5577 SM00788 Adenylosuccinate synthetase BCAH820_5580 SM00267 diguanylate cyclase BCAH820_5589 SM00470 ParB-like nuclease domain BCAH820_5591 SM00470 ParB-like nuclease domain BCAH820_5593 SM01228 BCAH820_5593 BCAH820_5595 SM00393 Putative single-stranded nucleic acids-binding domain BCAH820_5595 SM01245 BCAH820_5595 BCAH820_B0013 SM00507 HNH nucleases BCAH820_B0039 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BCAH820_B0051 SM00480 DNA polymerase III beta subunit BCAH820_B0064 SM00843 BCAH820_B0064 BCAH820_B0067 SM00864 Tubulin/FtsZ family, GTPase domain BCAH820_B0119 SM00857 Resolvase, N terminal domain BCAH820_B0149 SM00857 Resolvase, N terminal domain BCAH820_B0153 SM00530 Helix-turn-helix XRE-family like proteins BCAH820_B0160 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCAH820_B0167 SM00857 Resolvase, N terminal domain BCAH820_B0169 SM00829 Enoylreductase BCAH820_B0184 SM00411 bacterial (prokaryotic) histone like domain BCAH820_B0194 SM00966 SpoVT / AbrB like domain BCAH820_B0202 SM00857 Resolvase, N terminal domain BCAH820_B0216 SM00857 Resolvase, N terminal domain BCAH820_B0219 SM00857 Resolvase, N terminal domain BCAH820_B0222 SM00857 Resolvase, N terminal domain BCAH820_B0223 SM00342 helix_turn_helix, arabinose operon control protein BCAH820_B0223 SM00871 Bacterial transcription activator, effector binding domain BCAH820_B0241 SM00860 SMI1 / KNR4 family BCAH820_B0244 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCAH820_B0253 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCAH820_B0253 SM00387 Histidine kinase-like ATPases BCAH820_B0253 SM00388 His Kinase A (phosphoacceptor) domain BCAH820_B0254 SM00448 cheY-homologous receiver domain BCAH820_B0254 SM00862 Transcriptional regulatory protein, C terminal BCAH820_B0257 SM00382 ATPases associated with a variety of cellular activities BCAH820_B0259 SM00062 Bacterial periplasmic substrate-binding proteins BCAH820_B0259 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BCAH820_B0263 SM00287 Bacterial SH3 domain homologues BCAH820_B0290 SM00347 helix_turn_helix multiple antibiotic resistance protein BCAH820_B0292 SM01209 BCAH820_B0292 BCAH820_B0293 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCAH820_B0295 SM00028 Tetratricopeptide repeats BCAH820_B0295 SM00530 Helix-turn-helix XRE-family like proteins BCAH820_B0296 SM00729 Elongator protein 3, MiaB family, Radical SAM BCAH820_B0302 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCAH820_B0304 SM00226 Low molecular weight phosphatase family BCAH820_B0306 SM00382 ATPases associated with a variety of cellular activities BCAH820_B0313 SM00255 Toll - interleukin 1 - resistance BCAH820_B0319 SM00028 Tetratricopeptide repeats BCAH820_B0320 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCAH820_B0324 SM00318 Staphylococcal nuclease homologues BCAH820_B0326 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BCAH820_B0326 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BCAH820_B0326 SM00493 BCAH820_B0326