locus-tag class description BCE_0001 PF00308 Bacterial dnaA protein BCE_0001 PF08299 Bacterial dnaA protein helix-turn-helix BCE_0001 PF11638 DnaA N-terminal domain BCE_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain BCE_0002 PF02767 DNA polymerase III beta subunit, central domain BCE_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain BCE_0004 PF02463 RecF/RecN/SMC N terminal domain BCE_0005 PF00204 DNA gyrase B BCE_0005 PF00986 DNA gyrase B subunit, carboxyl terminus BCE_0005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_0005 PF01751 Toprim domain BCE_0006 PF03989 DNA gyrase C-terminal domain, beta-propeller BCE_0006 PF00521 DNA gyrase/topoisomerase IV, subunit A BCE_0008 PF14175 YaaC-like Protein BCE_0009 PF00478 IMP dehydrogenase / GMP reductase domain BCE_0009 PF00571 CBS domain BCE_0010 PF07943 Penicillin-binding protein 5, C-terminal domain BCE_0010 PF00768 D-alanyl-D-alanine carboxypeptidase BCE_0011 PF01680 SOR/SNZ family BCE_0012 PF01174 SNO glutamine amidotransferase family BCE_0013 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BCE_0013 PF02403 Seryl-tRNA synthetase N-terminal domain BCE_0015 PF01712 Deoxynucleoside kinase BCE_0016 PF01712 Deoxynucleoside kinase BCE_0017 PF00857 Isochorismatase family BCE_0019 PF14437 MafB19-like deaminase BCE_0020 PF12169 DNA polymerase III subunits gamma and tau domain III BCE_0021 PF02575 YbaB/EbfC DNA-binding family BCE_0022 PF13662 Toprim domain BCE_0022 PF02132 RecR protein BCE_0023 PF10704 Protein of unknown function (DUF2508) BCE_0025 PF07441 SigmaK-factor processing regulatory protein BofA BCE_0027 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BCE_0027 PF01276 Orn/Lys/Arg decarboxylase, major domain BCE_0028 PF02223 Thymidylate kinase BCE_0029 PF09115 DNA polymerase III, delta subunit, C terminal BCE_0030 PF04468 PSP1 C-terminal conserved region BCE_0031 PF06156 Initiation control protein YabA BCE_0032 PF05175 Methyltransferase small domain BCE_0033 PF01541 GIY-YIG catalytic domain BCE_0034 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BCE_0035 PF18277 AbrB C-terminal domain BCE_0035 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BCE_0036 PF01588 Putative tRNA binding domain BCE_0036 PF09334 tRNA synthetases class I (M) BCE_0036 PF08264 Anticodon-binding domain of tRNA BCE_0037 PF01026 TatD related DNase BCE_0038 PF13662 Toprim domain BCE_0038 PF13331 Domain of unknown function (DUF4093) BCE_0039 PF00398 Ribosomal RNA adenine dimethylase BCE_0040 PF05582 YabG peptidase U57 BCE_0041 PF06257 Biofilm formation stimulator VEG BCE_0042 PF00269 Small, acid-soluble spore proteins, alpha/beta type BCE_0043 PF00288 GHMP kinases N terminal domain BCE_0043 PF08544 GHMP kinases C terminal BCE_0044 PF09182 Bacterial purine repressor, N-terminal BCE_0044 PF00156 Phosphoribosyl transferase domain BCE_0045 PF01042 Endoribonuclease L-PSP BCE_0046 PF04026 SpoVG BCE_0047 PF00132 Bacterial transferase hexapeptide (six repeats) BCE_0047 PF00483 Nucleotidyl transferase BCE_0048 PF14572 Phosphoribosyl synthetase-associated domain BCE_0048 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BCE_0049 PF01195 Peptidyl-tRNA hydrolase BCE_0051 PF00270 DEAD/DEAH box helicase BCE_0051 PF00271 Helicase conserved C-terminal domain BCE_0051 PF03461 TRCF domain BCE_0051 PF17757 UvrB interaction domain BCE_0051 PF02559 CarD-like/TRCF domain BCE_0052 PF15714 Stage V sporulation protein T C-terminal, transcription factor BCE_0052 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BCE_0053 PF14667 Polysaccharide biosynthesis C-terminal domain BCE_0053 PF01943 Polysaccharide biosynthesis protein BCE_0054 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BCE_0054 PF03819 MazG nucleotide pyrophosphohydrolase domain BCE_0055 PF01479 S4 domain BCE_0056 PF07873 YabP family BCE_0057 PF09578 Spore cortex protein YabQ (Spore_YabQ) BCE_0059 PF00575 S1 RNA binding domain BCE_0060 PF07228 Stage II sporulation protein E (SpoIIE) BCE_0061 PF01171 PP-loop family BCE_0061 PF11734 TilS substrate C-terminal domain BCE_0061 PF09179 TilS substrate binding domain BCE_0063 PF17862 AAA+ lid domain BCE_0063 PF00004 ATPase family associated with various cellular activities (AAA) BCE_0063 PF06480 FtsH Extracellular BCE_0063 PF01434 Peptidase family M41 BCE_0064 PF03309 Type III pantothenate kinase BCE_0065 PF01430 Hsp33 protein BCE_0066 PF00291 Pyridoxal-phosphate dependent enzyme BCE_0067 PF04715 Anthranilate synthase component I, N terminal region BCE_0067 PF00425 chorismate binding enzyme BCE_0068 PF00117 Glutamine amidotransferase class-I BCE_0069 PF01063 Amino-transferase class IV BCE_0070 PF00809 Pterin binding enzyme BCE_0071 PF02152 Dihydroneopterin aldolase BCE_0072 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BCE_0073 PF01381 Helix-turn-helix BCE_0074 PF01207 Dihydrouridine synthase (Dus) BCE_0075 PF01336 OB-fold nucleic acid binding domain BCE_0075 PF00152 tRNA synthetases class II (D, K and N) BCE_0078 PF17727 CtsR C-terminal dimerization domain BCE_0078 PF05848 CtsR N-terminal HTH domain BCE_0079 PF02151 UvrB/uvrC motif BCE_0080 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain BCE_0081 PF00004 ATPase family associated with various cellular activities (AAA) BCE_0081 PF10431 C-terminal, D2-small domain, of ClpB protein BCE_0081 PF07724 AAA domain (Cdc48 subfamily) BCE_0081 PF17871 AAA lid domain BCE_0081 PF02861 Clp amino terminal domain, pathogenicity island component BCE_0082 PF18073 Rubredoxin metal binding domain BCE_0083 PF10635 DisA bacterial checkpoint controller linker region BCE_0083 PF02457 DisA bacterial checkpoint controller nucleotide-binding BCE_0085 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BCE_0086 PF02542 YgbB family BCE_0087 PF00749 tRNA synthetases class I (E and Q), catalytic domain BCE_0088 PF06426 Serine acetyltransferase, N-terminal BCE_0088 PF00132 Bacterial transferase hexapeptide (six repeats) BCE_0089 PF09190 DALR domain BCE_0089 PF01406 tRNA synthetases class I (C) catalytic domain BCE_0090 PF00636 Ribonuclease III domain BCE_0091 PF00588 SpoU rRNA Methylase family BCE_0091 PF08032 RNA 2'-O ribose methyltransferase substrate binding BCE_0092 PF05991 YacP-like NYN domain BCE_0093 PF08281 Sigma-70, region 4 BCE_0093 PF04542 Sigma-70 region 2 BCE_0094 PF00471 Ribosomal protein L33 BCE_0095 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BCE_0096 PF00467 KOW motif BCE_0096 PF02357 Transcription termination factor nusG BCE_0097 PF00298 Ribosomal protein L11, RNA binding domain BCE_0097 PF03946 Ribosomal protein L11, N-terminal domain BCE_0098 PF00687 Ribosomal protein L1p/L10e family BCE_0099 PF00466 Ribosomal protein L10 BCE_0100 PF00542 Ribosomal protein L7/L12 C-terminal domain BCE_0100 PF16320 Ribosomal protein L7/L12 dimerisation domain BCE_0101 PF05175 Methyltransferase small domain BCE_0102 PF00562 RNA polymerase Rpb2, domain 6 BCE_0102 PF04560 RNA polymerase Rpb2, domain 7 BCE_0102 PF10385 RNA polymerase beta subunit external 1 domain BCE_0102 PF04563 RNA polymerase beta subunit BCE_0102 PF04561 RNA polymerase Rpb2, domain 2 BCE_0102 PF04565 RNA polymerase Rpb2, domain 3 BCE_0103 PF00623 RNA polymerase Rpb1, domain 2 BCE_0103 PF04997 RNA polymerase Rpb1, domain 1 BCE_0103 PF04998 RNA polymerase Rpb1, domain 5 BCE_0103 PF05000 RNA polymerase Rpb1, domain 4 BCE_0103 PF04983 RNA polymerase Rpb1, domain 3 BCE_0104 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BCE_0105 PF00164 Ribosomal protein S12/S23 BCE_0106 PF00177 Ribosomal protein S7p/S5e BCE_0107 PF00009 Elongation factor Tu GTP binding domain BCE_0107 PF03144 Elongation factor Tu domain 2 BCE_0107 PF00679 Elongation factor G C-terminus BCE_0107 PF14492 Elongation Factor G, domain II BCE_0107 PF03764 Elongation factor G, domain IV BCE_0108 PF03144 Elongation factor Tu domain 2 BCE_0108 PF03143 Elongation factor Tu C-terminal domain BCE_0108 PF00009 Elongation factor Tu GTP binding domain BCE_0109 PF00338 Ribosomal protein S10p/S20e BCE_0110 PF00297 Ribosomal protein L3 BCE_0111 PF00573 Ribosomal protein L4/L1 family BCE_0112 PF00276 Ribosomal protein L23 BCE_0113 PF00181 Ribosomal Proteins L2, RNA binding domain BCE_0113 PF03947 Ribosomal Proteins L2, C-terminal domain BCE_0114 PF00203 Ribosomal protein S19 BCE_0115 PF00237 Ribosomal protein L22p/L17e BCE_0116 PF07650 KH domain BCE_0116 PF00189 Ribosomal protein S3, C-terminal domain BCE_0117 PF00252 Ribosomal protein L16p/L10e BCE_0118 PF00831 Ribosomal L29 protein BCE_0119 PF00366 Ribosomal protein S17 BCE_0120 PF00238 Ribosomal protein L14p/L23e BCE_0121 PF00467 KOW motif BCE_0121 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BCE_0122 PF00281 Ribosomal protein L5 BCE_0122 PF00673 ribosomal L5P family C-terminus BCE_0123 PF00253 Ribosomal protein S14p/S29e BCE_0124 PF00410 Ribosomal protein S8 BCE_0125 PF00347 Ribosomal protein L6 BCE_0126 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BCE_0127 PF03719 Ribosomal protein S5, C-terminal domain BCE_0127 PF00333 Ribosomal protein S5, N-terminal domain BCE_0128 PF00327 Ribosomal protein L30p/L7e BCE_0129 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BCE_0130 PF00344 SecY translocase BCE_0131 PF05191 Adenylate kinase, active site lid BCE_0132 PF00557 Metallopeptidase family M24 BCE_0133 PF01176 Translation initiation factor 1A / IF-1 BCE_0134 PF00444 Ribosomal protein L36 BCE_0135 PF00416 Ribosomal protein S13/S18 BCE_0136 PF00411 Ribosomal protein S11 BCE_0137 PF01000 RNA polymerase Rpb3/RpoA insert domain BCE_0137 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BCE_0137 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BCE_0138 PF01196 Ribosomal protein L17 BCE_0139 PF00005 ABC transporter BCE_0140 PF00005 ABC transporter BCE_0141 PF02361 Cobalt transport protein BCE_0142 PF01416 tRNA pseudouridine synthase BCE_0143 PF00572 Ribosomal protein L13 BCE_0144 PF00380 Ribosomal protein S9/S16 BCE_0146 PF01520 N-acetylmuramoyl-L-alanine amidase BCE_0147 PF10609 NUBPL iron-transfer P-loop NTPase BCE_0148 PF17898 Spore germination GerD central core domain BCE_0149 PF14089 KinB-signalling pathway activation in sporulation BCE_0150 PF01522 Polysaccharide deacetylase BCE_0153 PF02595 Glycerate kinase family BCE_0154 PF00491 Arginase family BCE_0155 PF02457 DisA bacterial checkpoint controller nucleotide-binding BCE_0156 PF07949 YbbR-like protein BCE_0157 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BCE_0157 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BCE_0157 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BCE_0157 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BCE_0158 PF01380 SIS domain BCE_0160 PF13307 Helicase C-terminal domain BCE_0161 PF01609 Transposase DDE domain BCE_0167 PF00005 ABC transporter BCE_0167 PF03412 Peptidase C39 family BCE_0167 PF00664 ABC transporter transmembrane region BCE_0175 PF00665 Integrase core domain BCE_0176 PF13401 AAA domain BCE_0176 PF11426 Tn7 transposition regulator TnsC BCE_0177 PF15978 Tn7-like transposition protein D BCE_0177 PF06527 TniQ BCE_0182 PF08722 TnsA endonuclease N terminal BCE_0182 PF08721 TnsA endonuclease C terminal BCE_0183 PF00665 Integrase core domain BCE_0184 PF13401 AAA domain BCE_0184 PF11426 Tn7 transposition regulator TnsC BCE_0195 PF00528 Binding-protein-dependent transport system inner membrane component BCE_0196 PF00005 ABC transporter BCE_0196 PF09383 NIL domain BCE_0197 PF03180 NLPA lipoprotein BCE_0198 PF08240 Alcohol dehydrogenase GroES-like domain BCE_0198 PF00107 Zinc-binding dehydrogenase BCE_0199 PF01565 FAD binding domain BCE_0200 PF07690 Major Facilitator Superfamily BCE_0202 PF07690 Major Facilitator Superfamily BCE_0205 PF00528 Binding-protein-dependent transport system inner membrane component BCE_0206 PF12911 N-terminal TM domain of oligopeptide transport permease C BCE_0206 PF00528 Binding-protein-dependent transport system inner membrane component BCE_0207 PF00005 ABC transporter BCE_0207 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BCE_0208 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BCE_0208 PF00005 ABC transporter BCE_0209 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCE_0211 PF12833 Helix-turn-helix domain BCE_0212 PF00440 Bacterial regulatory proteins, tetR family BCE_0214 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCE_0215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCE_0216 PF00248 Aldo/keto reductase family BCE_0217 PF03807 NADP oxidoreductase coenzyme F420-dependent BCE_0217 PF14748 Pyrroline-5-carboxylate reductase dimerisation BCE_0219 PF04973 Nicotinamide mononucleotide transporter BCE_0220 PF06800 Sugar transport protein BCE_0221 PF00528 Binding-protein-dependent transport system inner membrane component BCE_0223 PF12727 PBP superfamily domain BCE_0223 PF12728 Helix-turn-helix domain BCE_0226 PF03466 LysR substrate binding domain BCE_0226 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCE_0227 PF00892 EamA-like transporter family BCE_0228 PF14142 YrzO-like protein BCE_0230 PF01553 Acyltransferase BCE_0232 PF00356 Bacterial regulatory proteins, lacI family BCE_0232 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BCE_0234 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BCE_0234 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BCE_0237 PF01026 TatD related DNase BCE_0239 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) BCE_0245 PF12848 ABC transporter BCE_0245 PF00005 ABC transporter BCE_0245 PF16326 ABC transporter C-terminal domain BCE_0247 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCE_0248 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCE_0249 PF00528 Binding-protein-dependent transport system inner membrane component BCE_0251 PF00005 ABC transporter BCE_0251 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BCE_0252 PF00005 ABC transporter BCE_0252 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BCE_0260 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCE_0261 PF01557 Fumarylacetoacetate (FAA) hydrolase family BCE_0263 PF13520 Amino acid permease BCE_0264 PF07690 Major Facilitator Superfamily BCE_0265 PF07478 D-ala D-ala ligase C-terminus BCE_0265 PF01820 D-ala D-ala ligase N-terminus BCE_0266 PF08245 Mur ligase middle domain BCE_0266 PF01225 Mur ligase family, catalytic domain BCE_0266 PF02875 Mur ligase family, glutamate ligase domain BCE_0267 PF00271 Helicase conserved C-terminal domain BCE_0267 PF00270 DEAD/DEAH box helicase BCE_0268 PF03851 UV-endonuclease UvdE BCE_0269 PF01694 Rhomboid family BCE_0270 PF01648 4'-phosphopantetheinyl transferase superfamily BCE_0272 PF00842 Alanine racemase, C-terminal domain BCE_0272 PF01168 Alanine racemase, N-terminal domain BCE_0273 PF01402 Ribbon-helix-helix protein, copG family BCE_0274 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system BCE_0275 PF17674 HHH domain BCE_0275 PF00575 S1 RNA binding domain BCE_0275 PF09371 Tex-like protein N-terminal domain BCE_0275 PF16921 Tex protein YqgF-like domain BCE_0277 PF10263 SprT-like family BCE_0277 PF17283 SprT-like zinc ribbon domain BCE_0278 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BCE_0279 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BCE_0280 PF00814 Glycoprotease family BCE_0281 PF00583 Acetyltransferase (GNAT) family BCE_0282 PF00814 Glycoprotease family BCE_0284 PF12848 ABC transporter BCE_0284 PF16326 ABC transporter C-terminal domain BCE_0284 PF00005 ABC transporter BCE_0285 PF06971 Putative DNA-binding protein N-terminus BCE_0285 PF02629 CoA binding domain BCE_0287 PF02517 CPBP intramembrane metalloprotease BCE_0288 PF00166 Chaperonin 10 Kd subunit BCE_0289 PF00118 TCP-1/cpn60 chaperonin family BCE_0290 PF00118 TCP-1/cpn60 chaperonin family BCE_0291 PF02540 NAD synthase BCE_0291 PF00117 Glutamine amidotransferase class-I BCE_0291 PF00958 GMP synthase C terminal domain BCE_0293 PF00860 Permease family BCE_0294 PF00072 Response regulator receiver domain BCE_0294 PF00486 Transcriptional regulatory protein, C terminal BCE_0295 PF16736 Single Cache-like BCE_0295 PF00989 PAS fold BCE_0295 PF00512 His Kinase A (phospho-acceptor) domain BCE_0295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_0298 PF05045 Rhamnan synthesis protein F BCE_0298 PF14307 Glycosyltransferase WbsX BCE_0301 PF08241 Methyltransferase domain BCE_0305 PF00535 Glycosyl transferase family 2 BCE_0308 PF01177 Asp/Glu/Hydantoin racemase BCE_0309 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCE_0309 PF03466 LysR substrate binding domain BCE_0314 PF00892 EamA-like transporter family BCE_0317 PF00731 AIR carboxylase BCE_0318 PF02222 ATP-grasp domain BCE_0318 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BCE_0319 PF10397 Adenylosuccinate lyase C-terminus BCE_0319 PF00206 Lyase BCE_0320 PF01259 SAICAR synthetase BCE_0321 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase BCE_0323 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BCE_0323 PF02769 AIR synthase related protein, C-terminal domain BCE_0323 PF00586 AIR synthase related protein, N-terminal domain BCE_0324 PF00156 Phosphoribosyl transferase domain BCE_0325 PF02769 AIR synthase related protein, C-terminal domain BCE_0325 PF00586 AIR synthase related protein, N-terminal domain BCE_0326 PF00551 Formyl transferase BCE_0327 PF02142 MGS-like domain BCE_0327 PF01808 AICARFT/IMPCHase bienzyme BCE_0328 PF02843 Phosphoribosylglycinamide synthetase, C domain BCE_0328 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BCE_0328 PF02844 Phosphoribosylglycinamide synthetase, N domain BCE_0333 PF01884 PcrB family BCE_0334 PF13361 UvrD-like helicase C-terminal domain BCE_0334 PF00580 UvrD/REP helicase N-terminal domain BCE_0335 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BCE_0335 PF03120 NAD-dependent DNA ligase OB-fold domain BCE_0335 PF01653 NAD-dependent DNA ligase adenylation domain BCE_0335 PF00533 BRCA1 C Terminus (BRCT) domain BCE_0335 PF12826 Helix-hairpin-helix motif BCE_0336 PF07537 CamS sex pheromone cAM373 precursor BCE_0337 PF01925 Sulfite exporter TauE/SafE BCE_0338 PF00171 Aldehyde dehydrogenase family BCE_0340 PF00857 Isochorismatase family BCE_0341 PF00005 ABC transporter BCE_0341 PF09383 NIL domain BCE_0342 PF00528 Binding-protein-dependent transport system inner membrane component BCE_0343 PF03180 NLPA lipoprotein BCE_0346 PF17886 HSP20-like domain found in ArsA BCE_0346 PF02374 Anion-transporting ATPase BCE_0347 PF01047 MarR family BCE_0348 PF05360 yiaA/B two helix domain BCE_0349 PF02686 Glu-tRNAGln amidotransferase C subunit BCE_0350 PF01425 Amidase BCE_0351 PF02934 GatB/GatE catalytic domain BCE_0351 PF02637 GatB domain BCE_0352 PF00781 Diacylglycerol kinase catalytic domain BCE_0353 PF13419 Haloacid dehalogenase-like hydrolase BCE_0354 PF00202 Aminotransferase class-III BCE_0355 PF00158 Sigma-54 interaction domain BCE_0356 PF00171 Aldehyde dehydrogenase family BCE_0357 PF00893 Small Multidrug Resistance protein BCE_0359 PF02073 Thermophilic metalloprotease (M29) BCE_0362 PF07670 Nucleoside recognition BCE_0362 PF01773 Na+ dependent nucleoside transporter N-terminus BCE_0362 PF07662 Na+ dependent nucleoside transporter C-terminus BCE_0363 PF05958 tRNA (Uracil-5-)-methyltransferase BCE_0363 PF02475 Met-10+ like-protein BCE_0363 PF01938 TRAM domain BCE_0365 PF00145 C-5 cytosine-specific DNA methylase BCE_0377 PF01612 3'-5' exonuclease BCE_0377 PF00476 DNA polymerase family A BCE_0377 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BCE_0377 PF01367 5'-3' exonuclease, C-terminal SAM fold BCE_0378 PF00440 Bacterial regulatory proteins, tetR family BCE_0378 PF13977 BetI-type transcriptional repressor, C-terminal BCE_0382 PF08346 AntA/AntB antirepressor BCE_0382 PF10548 P22AR C-terminal domain BCE_0391 PF02772 S-adenosylmethionine synthetase, central domain BCE_0391 PF02773 S-adenosylmethionine synthetase, C-terminal domain BCE_0391 PF00438 S-adenosylmethionine synthetase, N-terminal domain BCE_0392 PF01555 DNA methylase BCE_0393 PF00145 C-5 cytosine-specific DNA methylase BCE_0397 PF03354 Phage Terminase BCE_0398 PF04860 Phage portal protein BCE_0399 PF00574 Clp protease BCE_0414 PF05105 Bacteriophage holin family BCE_0417 PF02796 Helix-turn-helix domain of resolvase BCE_0417 PF00239 Resolvase, N terminal domain BCE_0419 PF07508 Recombinase BCE_0419 PF13408 Recombinase zinc beta ribbon domain BCE_0420 PF13411 MerR HTH family regulatory protein BCE_0420 PF07739 TipAS antibiotic-recognition domain BCE_0421 PF10026 Predicted Zn-dependent protease (DUF2268) BCE_0426 PF01207 Dihydrouridine synthase (Dus) BCE_0427 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_0427 PF00512 His Kinase A (phospho-acceptor) domain BCE_0427 PF00989 PAS fold BCE_0427 PF13426 PAS domain BCE_0427 PF13188 PAS domain BCE_0430 PF07308 Protein of unknown function (DUF1456) BCE_0433 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BCE_0433 PF13378 Enolase C-terminal domain-like BCE_0436 PF01546 Peptidase family M20/M25/M40 BCE_0436 PF07687 Peptidase dimerisation domain BCE_0439 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCE_0439 PF13192 Thioredoxin domain BCE_0440 PF00578 AhpC/TSA family BCE_0444 PF00596 Class II Aldolase and Adducin N-terminal domain BCE_0449 PF01032 FecCD transport family BCE_0450 PF01032 FecCD transport family BCE_0451 PF01497 Periplasmic binding protein BCE_0452 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCE_0454 PF12728 Helix-turn-helix domain BCE_0463 PF10127 RNA repair pathway DNA polymerase beta family BCE_0464 PF07690 Major Facilitator Superfamily BCE_0465 PF01266 FAD dependent oxidoreductase BCE_0465 PF00355 Rieske [2Fe-2S] domain BCE_0467 PF00528 Binding-protein-dependent transport system inner membrane component BCE_0468 PF00497 Bacterial extracellular solute-binding proteins, family 3 BCE_0469 PF00005 ABC transporter BCE_0470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCE_0470 PF00672 HAMP domain BCE_0470 PF12729 Four helix bundle sensory module for signal transduction BCE_0471 PF01316 Arginine repressor, DNA binding domain BCE_0471 PF02863 Arginine repressor, C-terminal domain BCE_0473 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BCE_0473 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BCE_0474 PF13520 Amino acid permease BCE_0475 PF00696 Amino acid kinase family BCE_0479 PF08031 Berberine and berberine like BCE_0479 PF01565 FAD binding domain BCE_0480 PF08031 Berberine and berberine like BCE_0480 PF01565 FAD binding domain BCE_0481 PF00128 Alpha amylase, catalytic domain BCE_0481 PF16657 Maltogenic Amylase, C-terminal domain BCE_0482 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BCE_0482 PF02378 Phosphotransferase system, EIIC BCE_0482 PF00367 phosphotransferase system, EIIB BCE_0483 PF03372 Endonuclease/Exonuclease/phosphatase family BCE_0484 PF01061 ABC-2 type transporter BCE_0485 PF01131 DNA topoisomerase BCE_0485 PF01751 Toprim domain BCE_0486 PF02110 Hydroxyethylthiazole kinase family BCE_0487 PF02581 Thiamine monophosphate synthase BCE_0488 PF03605 Anaerobic c4-dicarboxylate membrane transporter BCE_0489 PF00672 HAMP domain BCE_0489 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCE_0490 PF01910 Thiamine-binding protein BCE_0491 PF00528 Binding-protein-dependent transport system inner membrane component BCE_0493 PF00005 ABC transporter BCE_0495 PF00005 ABC transporter BCE_0495 PF12848 ABC transporter BCE_0497 PF00041 Fibronectin type III domain BCE_0497 PF00704 Glycosyl hydrolases family 18 BCE_0503 PF08360 QacR-like protein, C-terminal region BCE_0503 PF00440 Bacterial regulatory proteins, tetR family BCE_0507 PF11700 Vacuole effluxer Atg22 like BCE_0510 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BCE_0510 PF03129 Anticodon binding domain BCE_0510 PF09180 Prolyl-tRNA synthetase, C-terminal BCE_0512 PF00480 ROK family BCE_0513 PF02342 TerD domain BCE_0514 PF02342 TerD domain BCE_0515 PF02342 TerD domain BCE_0516 PF03741 Integral membrane protein TerC family BCE_0517 PF14266 Putative component of 'biosynthetic module' BCE_0518 PF05816 Toxic anion resistance protein (TelA) BCE_0519 PF00690 Cation transporter/ATPase, N-terminus BCE_0519 PF00689 Cation transporting ATPase, C-terminus BCE_0520 PF06569 Protein of unknown function (DUF1128) BCE_0521 PF01451 Low molecular weight phosphotyrosine protein phosphatase BCE_0523 PF03631 Virulence factor BrkB BCE_0525 PF00892 EamA-like transporter family BCE_0528 PF10502 Signal peptidase, peptidase S26 BCE_0530 PF09335 SNARE associated Golgi protein BCE_0533 PF16242 Pyridoxamine 5'-phosphate oxidase like BCE_0535 PF01699 Sodium/calcium exchanger protein BCE_0536 PF14167 YfkD-like protein BCE_0537 PF08756 YfkB-like domain BCE_0537 PF04055 Radical SAM superfamily BCE_0539 PF05681 Fumarate hydratase (Fumerase) BCE_0539 PF05683 Fumarase C-terminus BCE_0540 PF01522 Polysaccharide deacetylase BCE_0541 PF00730 HhH-GPD superfamily base excision DNA repair protein BCE_0542 PF01938 TRAM domain BCE_0542 PF05958 tRNA (Uracil-5-)-methyltransferase BCE_0543 PF01416 tRNA pseudouridine synthase BCE_0545 PF00158 Sigma-54 interaction domain BCE_0545 PF13426 PAS domain BCE_0545 PF02954 Bacterial regulatory protein, Fis family BCE_0547 PF00324 Amino acid permease BCE_0548 PF07687 Peptidase dimerisation domain BCE_0548 PF01546 Peptidase family M20/M25/M40 BCE_0553 PF04960 Glutaminase BCE_0554 PF02378 Phosphotransferase system, EIIC BCE_0554 PF00367 phosphotransferase system, EIIB BCE_0555 PF00144 Beta-lactamase BCE_0559 PF00535 Glycosyl transferase family 2 BCE_0560 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BCE_0560 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BCE_0560 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BCE_0561 PF01370 NAD dependent epimerase/dehydratase family BCE_0561 PF02911 Formyl transferase, C-terminal domain BCE_0561 PF00551 Formyl transferase BCE_0562 PF00535 Glycosyl transferase family 2 BCE_0563 PF01228 Glycine radical BCE_0563 PF02901 Pyruvate formate lyase-like BCE_0564 PF04055 Radical SAM superfamily BCE_0565 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase BCE_0565 PF04101 Glycosyltransferase family 28 C-terminal domain BCE_0569 PF01979 Amidohydrolase family BCE_0570 PF08338 Domain of unknown function (DUF1731) BCE_0570 PF01370 NAD dependent epimerase/dehydratase family BCE_0571 PF02631 RecX family BCE_0574 PF08176 Small acid-soluble spore protein K family BCE_0575 PF14043 WVELL protein BCE_0576 PF04307 LexA-binding, inner membrane-associated putative hydrolase BCE_0577 PF14815 NUDIX domain BCE_0577 PF00730 HhH-GPD superfamily base excision DNA repair protein BCE_0579 PF04259 Small, acid-soluble spore protein, gamma-type BCE_0581 PF14182 YgaB-like protein BCE_0582 PF04167 Protein of unknown function (DUF402) BCE_0583 PF00664 ABC transporter transmembrane region BCE_0583 PF00005 ABC transporter BCE_0584 PF06081 Aromatic acid exporter family member 1 BCE_0585 PF01493 GXGXG motif BCE_0585 PF01645 Conserved region in glutamate synthase BCE_0585 PF04898 Glutamate synthase central domain BCE_0585 PF00310 Glutamine amidotransferases class-II BCE_0586 PF00202 Aminotransferase class-III BCE_0587 PF00005 ABC transporter BCE_0590 PF07885 Ion channel BCE_0591 PF00578 AhpC/TSA family BCE_0592 PF01475 Ferric uptake regulator family BCE_0593 PF11023 Zinc-ribbon containing domain BCE_0595 PF01709 Transcriptional regulator BCE_0596 PF13344 Haloacid dehalogenase-like hydrolase BCE_0596 PF00293 NUDIX domain BCE_0597 PF00912 Transglycosylase BCE_0597 PF00905 Penicillin binding protein transpeptidase domain BCE_0598 PF13462 Thioredoxin BCE_0600 PF08331 Domain of unknown function (DUF1730) BCE_0601 PF12671 Putative amidase domain BCE_0602 PF00588 SpoU rRNA Methylase family BCE_0603 PF00990 Diguanylate cyclase, GGDEF domain BCE_0603 PF03707 Bacterial signalling protein N terminal repeat BCE_0603 PF00563 EAL domain BCE_0605 PF06798 PrkA serine protein kinase C-terminal domain BCE_0605 PF08298 PrkA AAA domain BCE_0606 PF04285 Protein of unknown function (DUF444) BCE_0609 PF00497 Bacterial extracellular solute-binding proteins, family 3 BCE_0610 PF00005 ABC transporter BCE_0611 PF00528 Binding-protein-dependent transport system inner membrane component BCE_0614 PF02028 BCCT, betaine/carnitine/choline family transporter BCE_0616 PF08453 Peptidase family M9 N-terminal BCE_0616 PF18496 Collagenase G catalytic helper subdomain BCE_0616 PF01752 Collagenase BCE_0618 PF01145 SPFH domain / Band 7 family BCE_0618 PF15975 Flotillin BCE_0619 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCE_0619 PF00672 HAMP domain BCE_0619 PF02743 Cache domain BCE_0620 PF00989 PAS fold BCE_0620 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BCE_0620 PF17203 Single cache domain 3 BCE_0620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_0621 PF12431 Transcriptional regulator BCE_0621 PF00072 Response regulator receiver domain BCE_0622 PF03600 Citrate transporter BCE_0628 PF04309 Glycerol-3-phosphate responsive antiterminator BCE_0629 PF00005 ABC transporter BCE_0629 PF17912 MalK OB fold domain BCE_0630 PF00528 Binding-protein-dependent transport system inner membrane component BCE_0631 PF00528 Binding-protein-dependent transport system inner membrane component BCE_0632 PF13416 Bacterial extracellular solute-binding protein BCE_0633 PF00149 Calcineurin-like phosphoesterase BCE_0634 PF00072 Response regulator receiver domain BCE_0634 PF00486 Transcriptional regulatory protein, C terminal BCE_0635 PF00512 His Kinase A (phospho-acceptor) domain BCE_0635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_0637 PF13529 Peptidase_C39 like family BCE_0639 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BCE_0639 PF17203 Single cache domain 3 BCE_0639 PF00989 PAS fold BCE_0639 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_0640 PF00072 Response regulator receiver domain BCE_0641 PF03390 2-hydroxycarboxylate transporter family BCE_0642 PF03949 Malic enzyme, NAD binding domain BCE_0642 PF00390 Malic enzyme, N-terminal domain BCE_0645 PF00892 EamA-like transporter family BCE_0646 PF00392 Bacterial regulatory proteins, gntR family BCE_0646 PF00155 Aminotransferase class I and II BCE_0649 PF00672 HAMP domain BCE_0649 PF00989 PAS fold BCE_0649 PF00512 His Kinase A (phospho-acceptor) domain BCE_0649 PF18698 Histidine kinase sensor domain BCE_0649 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_0650 PF00486 Transcriptional regulatory protein, C terminal BCE_0650 PF00072 Response regulator receiver domain BCE_0653 PF00583 Acetyltransferase (GNAT) family BCE_0653 PF13508 Acetyltransferase (GNAT) domain BCE_0654 PF02634 FdhD/NarQ family BCE_0655 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BCE_0655 PF01568 Molydopterin dinucleotide binding domain BCE_0655 PF00037 4Fe-4S binding domain BCE_0655 PF00384 Molybdopterin oxidoreductase BCE_0655 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BCE_0656 PF07849 Protein of unknown function (DUF1641) BCE_0659 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BCE_0659 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BCE_0660 PF13520 Amino acid permease BCE_0662 PF01022 Bacterial regulatory protein, arsR family BCE_0663 PF00403 Heavy-metal-associated domain BCE_0664 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BCE_0664 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain BCE_0664 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BCE_0667 PF07504 Fungalysin/Thermolysin Propeptide Motif BCE_0667 PF03413 Peptidase propeptide and YPEB domain BCE_0667 PF01447 Thermolysin metallopeptidase, catalytic domain BCE_0667 PF02868 Thermolysin metallopeptidase, alpha-helical domain BCE_0672 PF04294 VanW like protein BCE_0673 PF03816 Cell envelope-related transcriptional attenuator domain BCE_0674 PF07662 Na+ dependent nucleoside transporter C-terminus BCE_0674 PF01773 Na+ dependent nucleoside transporter N-terminus BCE_0675 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCE_0676 PF01595 Cyclin M transmembrane N-terminal domain BCE_0676 PF00571 CBS domain BCE_0676 PF03471 Transporter associated domain BCE_0677 PF00206 Lyase BCE_0677 PF10415 Fumarase C C-terminus BCE_0678 PF02652 L-lactate permease BCE_0680 PF01022 Bacterial regulatory protein, arsR family BCE_0681 PF08141 Small acid-soluble spore protein H family BCE_0682 PF00854 POT family BCE_0683 PF01497 Periplasmic binding protein BCE_0684 PF01032 FecCD transport family BCE_0685 PF01032 FecCD transport family BCE_0686 PF00005 ABC transporter BCE_0687 PF08241 Methyltransferase domain BCE_0688 PF00155 Aminotransferase class I and II BCE_0689 PF01370 NAD dependent epimerase/dehydratase family BCE_0690 PF00156 Phosphoribosyl transferase domain BCE_0691 PF00293 NUDIX domain BCE_0691 PF13344 Haloacid dehalogenase-like hydrolase BCE_0692 PF00092 von Willebrand factor type A domain BCE_0693 PF07728 AAA domain (dynein-related subfamily) BCE_0694 PF13091 PLD-like domain BCE_0694 PF13396 Phospholipase_D-nuclease N-terminal BCE_0696 PF00563 EAL domain BCE_0696 PF03707 Bacterial signalling protein N terminal repeat BCE_0696 PF00990 Diguanylate cyclase, GGDEF domain BCE_0697 PF13520 Amino acid permease BCE_0698 PF07702 UTRA domain BCE_0698 PF00392 Bacterial regulatory proteins, gntR family BCE_0699 PF02378 Phosphotransferase system, EIIC BCE_0699 PF00367 phosphotransferase system, EIIB BCE_0700 PF16657 Maltogenic Amylase, C-terminal domain BCE_0700 PF00128 Alpha amylase, catalytic domain BCE_0703 PF03323 Bacillus/Clostridium GerA spore germination protein BCE_0704 PF03323 Bacillus/Clostridium GerA spore germination protein BCE_0705 PF01636 Phosphotransferase enzyme family BCE_0706 PF01235 Sodium:alanine symporter family BCE_0707 PF00005 ABC transporter BCE_0708 PF00497 Bacterial extracellular solute-binding proteins, family 3 BCE_0709 PF00528 Binding-protein-dependent transport system inner membrane component BCE_0710 PF00528 Binding-protein-dependent transport system inner membrane component BCE_0711 PF00324 Amino acid permease BCE_0716 PF13280 WYL domain BCE_0716 PF08279 HTH domain BCE_0717 PF01872 RibD C-terminal domain BCE_0718 PF00672 HAMP domain BCE_0718 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_0718 PF00512 His Kinase A (phospho-acceptor) domain BCE_0718 PF18698 Histidine kinase sensor domain BCE_0718 PF00989 PAS fold BCE_0719 PF00072 Response regulator receiver domain BCE_0719 PF00486 Transcriptional regulatory protein, C terminal BCE_0721 PF00916 Sulfate permease family BCE_0721 PF01740 STAS domain BCE_0722 PF00582 Universal stress protein family BCE_0724 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCE_0725 PF00528 Binding-protein-dependent transport system inner membrane component BCE_0726 PF00528 Binding-protein-dependent transport system inner membrane component BCE_0727 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BCE_0727 PF00005 ABC transporter BCE_0728 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BCE_0728 PF00005 ABC transporter BCE_0729 PF07690 Major Facilitator Superfamily BCE_0730 PF01047 MarR family BCE_0731 PF07690 Major Facilitator Superfamily BCE_0732 PF00356 Bacterial regulatory proteins, lacI family BCE_0733 PF00294 pfkB family carbohydrate kinase BCE_0734 PF05025 RbsD / FucU transport protein family BCE_0735 PF00005 ABC transporter BCE_0736 PF02653 Branched-chain amino acid transport system / permease component BCE_0737 PF13407 Periplasmic binding protein domain BCE_0738 PF00923 Transaldolase/Fructose-6-phosphate aldolase BCE_0740 PF05547 Immune inhibitor A peptidase M6 BCE_0742 PF08240 Alcohol dehydrogenase GroES-like domain BCE_0742 PF00107 Zinc-binding dehydrogenase BCE_0744 PF00882 Zinc dependent phospholipase C BCE_0745 PF03372 Endonuclease/Exonuclease/phosphatase family BCE_0750 PF02673 Bacitracin resistance protein BacA BCE_0751 PF02743 Cache domain BCE_0751 PF00672 HAMP domain BCE_0751 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCE_0752 PF01476 LysM domain BCE_0752 PF06725 3D domain BCE_0753 PF01381 Helix-turn-helix BCE_0755 PF04203 Sortase domain BCE_0757 PF00854 POT family BCE_0759 PF05525 Branched-chain amino acid transport protein BCE_0762 PF00324 Amino acid permease BCE_0763 PF00860 Permease family BCE_0766 PF13673 Acetyltransferase (GNAT) domain BCE_0768 PF00999 Sodium/hydrogen exchanger family BCE_0768 PF02080 TrkA-C domain BCE_0768 PF02254 TrkA-N domain BCE_0770 PF00510 Cytochrome c oxidase subunit III BCE_0771 PF00115 Cytochrome C and Quinol oxidase polypeptide I BCE_0772 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BCE_0773 PF00324 Amino acid permease BCE_0774 PF13529 Peptidase_C39 like family BCE_0775 PF01546 Peptidase family M20/M25/M40 BCE_0775 PF07687 Peptidase dimerisation domain BCE_0776 PF11755 Protein of unknown function (DUF3311) BCE_0777 PF00474 Sodium:solute symporter family BCE_0778 PF03323 Bacillus/Clostridium GerA spore germination protein BCE_0779 PF03845 Spore germination protein BCE_0780 PF05504 Spore germination B3/ GerAC like, C-terminal BCE_0783 PF17910 FeoB cytosolic helical domain BCE_0783 PF07670 Nucleoside recognition BCE_0783 PF02421 Ferrous iron transport protein B BCE_0783 PF07664 Ferrous iron transport protein B C terminus BCE_0783 PF04023 FeoA domain BCE_0784 PF12849 PBP superfamily domain BCE_0785 PF00528 Binding-protein-dependent transport system inner membrane component BCE_0786 PF00528 Binding-protein-dependent transport system inner membrane component BCE_0788 PF00873 AcrB/AcrD/AcrF family BCE_0791 PF00571 CBS domain BCE_0794 PF08239 Bacterial SH3 domain BCE_0794 PF00246 Zinc carboxypeptidase BCE_0795 PF03070 TENA/THI-4/PQQC family BCE_0796 PF00005 ABC transporter BCE_0797 PF00528 Binding-protein-dependent transport system inner membrane component BCE_0798 PF09084 NMT1/THI5 like BCE_0799 PF02581 Thiamine monophosphate synthase BCE_0800 PF01266 FAD dependent oxidoreductase BCE_0801 PF02597 ThiS family BCE_0802 PF05690 Thiazole biosynthesis protein ThiG BCE_0803 PF00899 ThiF family BCE_0804 PF08543 Phosphomethylpyrimidine kinase BCE_0809 PF03814 Potassium-transporting ATPase A subunit BCE_0811 PF02669 K+-transporting ATPase, c chain BCE_0812 PF02702 Osmosensitive K+ channel His kinase sensor domain BCE_0813 PF07690 Major Facilitator Superfamily BCE_0814 PF01047 MarR family BCE_0817 PF00860 Permease family BCE_0819 PF17969 L,D-transpeptidase C-terminal domain BCE_0819 PF03734 L,D-transpeptidase catalytic domain BCE_0822 PF00085 Thioredoxin BCE_0823 PF02600 Disulfide bond formation protein DsbB BCE_0824 PF14148 YhdB-like protein BCE_0826 PF03845 Spore germination protein BCE_0829 PF03323 Bacillus/Clostridium GerA spore germination protein BCE_0831 PF00881 Nitroreductase family BCE_0832 PF04293 SpoVR like protein BCE_0840 PF00271 Helicase conserved C-terminal domain BCE_0840 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BCE_0840 PF04851 Type III restriction enzyme, res subunit BCE_0840 PF08463 EcoEI R protein C-terminal BCE_0841 PF02384 N-6 DNA Methylase BCE_0844 PF02272 DHHA1 domain BCE_0844 PF17768 RecJ OB domain BCE_0844 PF01368 DHH family BCE_0844 PF10141 Single-strand DNA-specific exonuclease, C terminal domain BCE_0845 PF07508 Recombinase BCE_0845 PF13408 Recombinase zinc beta ribbon domain BCE_0845 PF00239 Resolvase, N terminal domain BCE_0853 PF04293 SpoVR like protein BCE_0855 PF00271 Helicase conserved C-terminal domain BCE_0858 PF04293 SpoVR like protein BCE_0860 PF00089 Trypsin BCE_0865 PF02583 Metal-sensitive transcriptional repressor BCE_0866 PF01206 Sulfurtransferase TusA BCE_0866 PF00581 Rhodanese-like domain BCE_0867 PF00753 Metallo-beta-lactamase superfamily BCE_0867 PF00581 Rhodanese-like domain BCE_0868 PF01206 Sulfurtransferase TusA BCE_0869 PF00581 Rhodanese-like domain BCE_0871 PF13686 DsrE/DsrF/DrsH-like family BCE_0872 PF01925 Sulfite exporter TauE/SafE BCE_0875 PF03816 Cell envelope-related transcriptional attenuator domain BCE_0877 PF08240 Alcohol dehydrogenase GroES-like domain BCE_0877 PF00107 Zinc-binding dehydrogenase BCE_0878 PF02690 Na+/Pi-cotransporter BCE_0879 PF07690 Major Facilitator Superfamily BCE_0881 PF00874 PRD domain BCE_0881 PF08279 HTH domain BCE_0881 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BCE_0881 PF05043 Mga helix-turn-helix domain BCE_0882 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BCE_0883 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BCE_0884 PF02378 Phosphotransferase system, EIIC BCE_0887 PF06725 3D domain BCE_0887 PF01476 LysM domain BCE_0888 PF12704 MacB-like periplasmic core domain BCE_0888 PF02687 FtsX-like permease family BCE_0889 PF00005 ABC transporter BCE_0891 PF09529 Integral membrane protein (intg_mem_TP0381) BCE_0894 PF05525 Branched-chain amino acid transport protein BCE_0895 PF05067 Manganese containing catalase BCE_0896 PF12652 CotJB protein BCE_0897 PF11007 Spore coat associated protein JA (CotJA) BCE_0900 PF02735 Ku70/Ku80 beta-barrel domain BCE_0902 PF09335 SNARE associated Golgi protein BCE_0909 PF13520 Amino acid permease BCE_0910 PF00999 Sodium/hydrogen exchanger family BCE_0912 PF01418 Helix-turn-helix domain, rpiR family BCE_0912 PF01380 SIS domain BCE_0913 PF13580 SIS domain BCE_0914 PF00367 phosphotransferase system, EIIB BCE_0914 PF02378 Phosphotransferase system, EIIC BCE_0916 PF07681 DoxX BCE_0919 PF00892 EamA-like transporter family BCE_0920 PF01037 Lrp/AsnC ligand binding domain BCE_0922 PF00106 short chain dehydrogenase BCE_0923 PF13411 MerR HTH family regulatory protein BCE_0925 PF00893 Small Multidrug Resistance protein BCE_0926 PF00893 Small Multidrug Resistance protein BCE_0927 PF00440 Bacterial regulatory proteins, tetR family BCE_0927 PF17934 Tetracyclin repressor-like, C-terminal domain BCE_0928 PF07690 Major Facilitator Superfamily BCE_0929 PF01638 HxlR-like helix-turn-helix BCE_0931 PF02525 Flavodoxin-like fold BCE_0932 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCE_0932 PF12793 Sugar transport-related sRNA regulator N-term BCE_0933 PF07690 Major Facilitator Superfamily BCE_0935 PF01965 DJ-1/PfpI family BCE_0937 PF13520 Amino acid permease BCE_0939 PF01177 Asp/Glu/Hydantoin racemase BCE_0940 PF00171 Aldehyde dehydrogenase family BCE_0942 PF00664 ABC transporter transmembrane region BCE_0942 PF00005 ABC transporter BCE_0943 PF00664 ABC transporter transmembrane region BCE_0943 PF00005 ABC transporter BCE_0945 PF00497 Bacterial extracellular solute-binding proteins, family 3 BCE_0946 PF00528 Binding-protein-dependent transport system inner membrane component BCE_0947 PF00005 ABC transporter BCE_0948 PF00269 Small, acid-soluble spore proteins, alpha/beta type BCE_0950 PF14398 YheC/D like ATP-grasp BCE_0952 PF04286 Protein of unknown function (DUF445) BCE_0953 PF06133 Control of competence regulator ComK, YlbF/YmcA BCE_0956 PF00205 Thiamine pyrophosphate enzyme, central domain BCE_0956 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BCE_0956 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BCE_0957 PF03306 Alpha-acetolactate decarboxylase BCE_0959 PF02245 Methylpurine-DNA glycosylase (MPG) BCE_0961 PF04650 YSIRK type signal peptide BCE_0961 PF10425 C-terminus of bacterial fibrinogen-binding adhesin BCE_0961 PF17210 SdrD B-like domain BCE_0961 PF00746 LPXTG cell wall anchor motif BCE_0961 PF17961 Bacterial Ig domain BCE_0962 PF01510 N-acetylmuramoyl-L-alanine amidase BCE_0962 PF01471 Putative peptidoglycan binding domain BCE_0964 PF04055 Radical SAM superfamily BCE_0965 PF13193 AMP-binding enzyme C-terminal domain BCE_0965 PF00501 AMP-binding enzyme BCE_0966 PF05738 Cna protein B-type domain BCE_0966 PF05737 Collagen binding domain BCE_0966 PF17802 Prealbumin-like fold domain BCE_0968 PF01740 STAS domain BCE_0968 PF00916 Sulfate permease family BCE_0970 PF01043 SecA preprotein cross-linking domain BCE_0970 PF07516 SecA Wing and Scaffold domain BCE_0970 PF07517 SecA DEAD-like domain BCE_0971 PF01943 Polysaccharide biosynthesis protein BCE_0971 PF14667 Polysaccharide biosynthesis C-terminal domain BCE_0973 PF00395 S-layer homology domain BCE_0973 PF00395 S-layer homology domain BCE_0975 PF03062 MBOAT, membrane-bound O-acyltransferase family BCE_0976 PF03062 MBOAT, membrane-bound O-acyltransferase family BCE_0979 PF00378 Enoyl-CoA hydratase/isomerase BCE_0983 PF05343 M42 glutamyl aminopeptidase BCE_0984 PF00395 S-layer homology domain BCE_0984 PF01520 N-acetylmuramoyl-L-alanine amidase BCE_0986 PF02899 Phage integrase, N-terminal SAM-like domain BCE_0986 PF00589 Phage integrase family BCE_0987 PF02899 Phage integrase, N-terminal SAM-like domain BCE_0987 PF00589 Phage integrase family BCE_0989 PF11208 Protein of unknown function (DUF2992) BCE_0990 PF12833 Helix-turn-helix domain BCE_0990 PF06445 GyrI-like small molecule binding domain BCE_0991 PF13739 Deacetylase PdaC BCE_0991 PF01522 Polysaccharide deacetylase BCE_0991 PF11738 Protein of unknown function (DUF3298) BCE_0993 PF11121 Protein of unknown function (DUF2639) BCE_0994 PF05544 Proline racemase BCE_0995 PF02423 Ornithine cyclodeaminase/mu-crystallin family BCE_1000 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCE_1001 PF00528 Binding-protein-dependent transport system inner membrane component BCE_1002 PF12911 N-terminal TM domain of oligopeptide transport permease C BCE_1002 PF00528 Binding-protein-dependent transport system inner membrane component BCE_1003 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BCE_1003 PF00005 ABC transporter BCE_1004 PF00005 ABC transporter BCE_1004 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BCE_1008 PF00083 Sugar (and other) transporter BCE_1009 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_1009 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BCE_1010 PF12431 Transcriptional regulator BCE_1010 PF08279 HTH domain BCE_1010 PF00072 Response regulator receiver domain BCE_1011 PF03401 Tripartite tricarboxylate transporter family receptor BCE_1018 PF18273 Type III R-M EcoP15I C-terminal domain BCE_1018 PF01555 DNA methylase BCE_1019 PF08774 VRR-NUC domain BCE_1019 PF04851 Type III restriction enzyme, res subunit BCE_1026 PF17762 HTH domain found in ParB protein BCE_1026 PF02195 ParB-like nuclease domain BCE_1028 PF00772 DnaB-like helicase N terminal domain BCE_1028 PF03796 DnaB-like helicase C terminal domain BCE_1030 PF01925 Sulfite exporter TauE/SafE BCE_1034 PF04012 PspA/IM30 family BCE_1046 PF01066 CDP-alcohol phosphatidyltransferase BCE_1052 PF02733 Dak1 domain BCE_1054 PF02733 Dak1 domain BCE_1056 PF18801 response regulator aspartate phosphatase H, N terminal BCE_1061 PF01526 Tn3 transposase DDE domain BCE_1061 PF13700 Domain of unknown function (DUF4158) BCE_1067 PF00296 Luciferase-like monooxygenase BCE_1070 PF02525 Flavodoxin-like fold BCE_1071 PF02082 Transcriptional regulator BCE_1072 PF00395 S-layer homology domain BCE_1075 PF00395 S-layer homology domain BCE_1075 PF00150 Cellulase (glycosyl hydrolase family 5) BCE_1075 PF03424 Carbohydrate binding domain (family 17/28) BCE_1080 PF11181 Heat induced stress protein YflT BCE_1081 PF05532 CsbD-like BCE_1084 PF01740 STAS domain BCE_1085 PF13581 Histidine kinase-like ATPase domain BCE_1086 PF04545 Sigma-70, region 4 BCE_1086 PF04539 Sigma-70 region 3 BCE_1086 PF04542 Sigma-70 region 2 BCE_1088 PF07228 Stage II sporulation protein E (SpoIIE) BCE_1088 PF13426 PAS domain BCE_1089 PF03705 CheR methyltransferase, all-alpha domain BCE_1089 PF01739 CheR methyltransferase, SAM binding domain BCE_1090 PF00512 His Kinase A (phospho-acceptor) domain BCE_1090 PF00672 HAMP domain BCE_1090 PF01627 Hpt domain BCE_1090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_1090 PF00072 Response regulator receiver domain BCE_1090 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BCE_1095 PF01906 Putative heavy-metal-binding BCE_1098 PF12323 Helix-turn-helix domain BCE_1098 PF01385 Probable transposase BCE_1098 PF07282 Putative transposase DNA-binding domain BCE_1099 PF08240 Alcohol dehydrogenase GroES-like domain BCE_1099 PF00107 Zinc-binding dehydrogenase BCE_1101 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_1101 PF07730 Histidine kinase BCE_1102 PF00072 Response regulator receiver domain BCE_1102 PF00196 Bacterial regulatory proteins, luxR family BCE_1105 PF11121 Protein of unknown function (DUF2639) BCE_1109 PF00149 Calcineurin-like phosphoesterase BCE_1110 PF13514 AAA domain BCE_1111 PF01336 OB-fold nucleic acid binding domain BCE_1111 PF01966 HD domain BCE_1115 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCE_1116 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCE_1118 PF08281 Sigma-70, region 4 BCE_1118 PF04542 Sigma-70 region 2 BCE_1120 PF08386 TAP-like protein BCE_1120 PF00561 alpha/beta hydrolase fold BCE_1123 PF04309 Glycerol-3-phosphate responsive antiterminator BCE_1124 PF00230 Major intrinsic protein BCE_1125 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BCE_1125 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BCE_1126 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BCE_1126 PF01266 FAD dependent oxidoreductase BCE_1128 PF13333 Integrase core domain BCE_1128 PF00665 Integrase core domain BCE_1128 PF13276 HTH-like domain BCE_1131 PF08281 Sigma-70, region 4 BCE_1131 PF04542 Sigma-70 region 2 BCE_1135 PF13538 UvrD-like helicase C-terminal domain BCE_1142 PF00012 Hsp70 protein BCE_1144 PF17866 AAA lid domain BCE_1144 PF00004 ATPase family associated with various cellular activities (AAA) BCE_1149 PF01047 MarR family BCE_1150 PF12732 YtxH-like protein BCE_1151 PF01230 HIT domain BCE_1152 PF00005 ABC transporter BCE_1153 PF05975 Bacterial ABC transporter protein EcsB BCE_1154 PF12787 EcsC protein family BCE_1156 PF00440 Bacterial regulatory proteins, tetR family BCE_1156 PF17934 Tetracyclin repressor-like, C-terminal domain BCE_1158 PF03703 Bacterial PH domain BCE_1159 PF03703 Bacterial PH domain BCE_1163 PF03703 Bacterial PH domain BCE_1164 PF03703 Bacterial PH domain BCE_1165 PF03992 Antibiotic biosynthesis monooxygenase BCE_1166 PF00905 Penicillin binding protein transpeptidase domain BCE_1166 PF00912 Transglycosylase BCE_1167 PF01208 Uroporphyrinogen decarboxylase (URO-D) BCE_1175 PF03965 Penicillinase repressor BCE_1177 PF17932 Tetracyclin repressor-like, C-terminal domain BCE_1177 PF00440 Bacterial regulatory proteins, tetR family BCE_1183 PF04893 Yip1 domain BCE_1184 PF12867 DinB superfamily BCE_1185 PF13280 WYL domain BCE_1185 PF08279 HTH domain BCE_1186 PF00356 Bacterial regulatory proteins, lacI family BCE_1187 PF14149 YhfH-like protein BCE_1188 PF12706 Beta-lactamase superfamily domain BCE_1189 PF10437 Bacterial lipoate protein ligase C-terminus BCE_1189 PF03099 Biotin/lipoate A/B protein ligase family BCE_1193 PF00501 AMP-binding enzyme BCE_1193 PF13193 AMP-binding enzyme C-terminal domain BCE_1195 PF01520 N-acetylmuramoyl-L-alanine amidase BCE_1195 PF00395 S-layer homology domain BCE_1197 PF00528 Binding-protein-dependent transport system inner membrane component BCE_1198 PF00528 Binding-protein-dependent transport system inner membrane component BCE_1199 PF00005 ABC transporter BCE_1199 PF17850 CysA C-terminal regulatory domain BCE_1199 PF12857 TOBE-like domain BCE_1201 PF05593 RHS Repeat BCE_1204 PF05593 RHS Repeat BCE_1206 PF05593 RHS Repeat BCE_1209 PF07968 Leukocidin/Hemolysin toxin family BCE_1211 PF12146 Serine aminopeptidase, S33 BCE_1212 PF00149 Calcineurin-like phosphoesterase BCE_1213 PF01966 HD domain BCE_1215 PF08281 Sigma-70, region 4 BCE_1215 PF04542 Sigma-70 region 2 BCE_1216 PF12833 Helix-turn-helix domain BCE_1216 PF06445 GyrI-like small molecule binding domain BCE_1217 PF00512 His Kinase A (phospho-acceptor) domain BCE_1217 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_1218 PF00486 Transcriptional regulatory protein, C terminal BCE_1218 PF00072 Response regulator receiver domain BCE_1223 PF01435 Peptidase family M48 BCE_1223 PF16491 CAAX prenyl protease N-terminal, five membrane helices BCE_1224 PF00892 EamA-like transporter family BCE_1227 PF00395 S-layer homology domain BCE_1228 PF01274 Malate synthase BCE_1229 PF00463 Isocitrate lyase family BCE_1232 PF00313 'Cold-shock' DNA-binding domain BCE_1236 PF06338 ComK protein BCE_1238 PF00072 Response regulator receiver domain BCE_1238 PF00196 Bacterial regulatory proteins, luxR family BCE_1242 PF09335 SNARE associated Golgi protein BCE_1243 PF10502 Signal peptidase, peptidase S26 BCE_1244 PF13361 UvrD-like helicase C-terminal domain BCE_1244 PF12705 PD-(D/E)XK nuclease superfamily BCE_1245 PF13361 UvrD-like helicase C-terminal domain BCE_1245 PF12705 PD-(D/E)XK nuclease superfamily BCE_1245 PF00580 UvrD/REP helicase N-terminal domain BCE_1247 PF10676 Spore germination protein gerPA/gerPF BCE_1248 PF10970 Spore germination protein GerPE BCE_1250 PF10737 Spore germination protein GerPC BCE_1251 PF10803 Spore germination GerPB BCE_1252 PF10676 Spore germination protein gerPA/gerPF BCE_1253 PF09388 Spo0E like sporulation regulatory protein BCE_1254 PF01557 Fumarylacetoacetate (FAA) hydrolase family BCE_1256 PF00202 Aminotransferase class-III BCE_1257 PF07457 Protein of unknown function (DUF1516) BCE_1259 PF00733 Asparagine synthase BCE_1259 PF13537 Glutamine amidotransferase domain BCE_1261 PF00199 Catalase BCE_1261 PF06628 Catalase-related immune-responsive BCE_1264 PF00690 Cation transporter/ATPase, N-terminus BCE_1264 PF00689 Cation transporting ATPase, C-terminus BCE_1268 PF06803 Protein of unknown function (DUF1232) BCE_1269 PF00909 Ammonium Transporter Family BCE_1270 PF00128 Alpha amylase, catalytic domain BCE_1273 PF04461 Protein of unknown function (DUF520) BCE_1274 PF17783 CvfB-like winged helix domain BCE_1274 PF13509 S1 domain BCE_1275 PF05593 RHS Repeat BCE_1278 PF05593 RHS Repeat BCE_1280 PF00639 PPIC-type PPIASE domain BCE_1282 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BCE_1282 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BCE_1283 PF12758 Protein of unknown function (DUF3813) BCE_1286 PF14168 YjzC-like protein BCE_1287 PF10431 C-terminal, D2-small domain, of ClpB protein BCE_1287 PF17871 AAA lid domain BCE_1287 PF07724 AAA domain (Cdc48 subfamily) BCE_1287 PF02861 Clp amino terminal domain, pathogenicity island component BCE_1287 PF00004 ATPase family associated with various cellular activities (AAA) BCE_1292 PF10815 ComZ BCE_1293 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BCE_1293 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BCE_1294 PF00109 Beta-ketoacyl synthase, N-terminal domain BCE_1294 PF02801 Beta-ketoacyl synthase, C-terminal domain BCE_1295 PF10026 Predicted Zn-dependent protease (DUF2268) BCE_1296 PF12227 Protein of unknown function (DUF3603) BCE_1297 PF00579 tRNA synthetases class I (W and Y) BCE_1300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCE_1301 PF00528 Binding-protein-dependent transport system inner membrane component BCE_1302 PF00528 Binding-protein-dependent transport system inner membrane component BCE_1302 PF12911 N-terminal TM domain of oligopeptide transport permease C BCE_1303 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BCE_1303 PF00005 ABC transporter BCE_1304 PF00005 ABC transporter BCE_1304 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BCE_1305 PF01554 MatE BCE_1306 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCE_1309 PF03960 ArsC family BCE_1310 PF03741 Integral membrane protein TerC family BCE_1311 PF05389 Negative regulator of genetic competence (MecA) BCE_1312 PF13396 Phospholipase_D-nuclease N-terminal BCE_1312 PF13091 PLD-like domain BCE_1314 PF01432 Peptidase family M3 BCE_1314 PF08439 Oligopeptidase F BCE_1317 PF01152 Bacterial-like globin BCE_1318 PF01928 CYTH domain BCE_1320 PF04607 Region found in RelA / SpoT proteins BCE_1321 PF01513 ATP-NAD kinase BCE_1322 PF00849 RNA pseudouridylate synthase BCE_1324 PF00149 Calcineurin-like phosphoesterase BCE_1325 PF01098 Cell cycle protein BCE_1326 PF00535 Glycosyl transferase family 2 BCE_1327 PF08241 Methyltransferase domain BCE_1328 PF05711 Macrocin-O-methyltransferase (TylF) BCE_1331 PF00535 Glycosyl transferase family 2 BCE_1331 PF13181 Tetratricopeptide repeat BCE_1335 PF00483 Nucleotidyl transferase BCE_1336 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BCE_1337 PF16363 GDP-mannose 4,6 dehydratase BCE_1338 PF04321 RmlD substrate binding domain BCE_1342 PF07098 Protein of unknown function (DUF1360) BCE_1346 PF00580 UvrD/REP helicase N-terminal domain BCE_1346 PF13361 UvrD-like helicase C-terminal domain BCE_1347 PF13673 Acetyltransferase (GNAT) domain BCE_1349 PF00756 Putative esterase BCE_1352 PF02368 Bacterial Ig-like domain (group 2) BCE_1353 PF00474 Sodium:solute symporter family BCE_1357 PF00591 Glycosyl transferase family, a/b domain BCE_1357 PF00117 Glutamine amidotransferase class-I BCE_1357 PF02885 Glycosyl transferase family, helical bundle domain BCE_1358 PF00591 Glycosyl transferase family, a/b domain BCE_1358 PF02885 Glycosyl transferase family, helical bundle domain BCE_1359 PF00218 Indole-3-glycerol phosphate synthase BCE_1360 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BCE_1361 PF00291 Pyridoxal-phosphate dependent enzyme BCE_1362 PF00290 Tryptophan synthase alpha chain BCE_1365 PF02652 L-lactate permease BCE_1367 PF10042 Uncharacterized conserved protein (DUF2278) BCE_1372 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCE_1372 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BCE_1375 PF01209 ubiE/COQ5 methyltransferase family BCE_1379 PF02817 e3 binding domain BCE_1379 PF00364 Biotin-requiring enzyme BCE_1379 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BCE_1380 PF00676 Dehydrogenase E1 component BCE_1380 PF16870 2-oxoglutarate dehydrogenase C-terminal BCE_1380 PF02779 Transketolase, pyrimidine binding domain BCE_1381 PF01381 Helix-turn-helix BCE_1388 PF07943 Penicillin-binding protein 5, C-terminal domain BCE_1388 PF00768 D-alanyl-D-alanine carboxypeptidase BCE_1390 PF12389 Camelysin metallo-endopeptidase BCE_1392 PF12389 Camelysin metallo-endopeptidase BCE_1393 PF01381 Helix-turn-helix BCE_1393 PF08671 Anti-repressor SinI BCE_1396 PF05547 Immune inhibitor A peptidase M6 BCE_1397 PF00171 Aldehyde dehydrogenase family BCE_1398 PF00005 ABC transporter BCE_1398 PF08402 TOBE domain BCE_1399 PF00528 Binding-protein-dependent transport system inner membrane component BCE_1400 PF00528 Binding-protein-dependent transport system inner membrane component BCE_1401 PF13416 Bacterial extracellular solute-binding protein BCE_1403 PF03176 MMPL family BCE_1405 PF01479 S4 domain BCE_1405 PF00849 RNA pseudouridylate synthase BCE_1407 PF00188 Cysteine-rich secretory protein family BCE_1409 PF13183 4Fe-4S dicluster domain BCE_1409 PF02754 Cysteine-rich domain BCE_1410 PF02913 FAD linked oxidases, C-terminal domain BCE_1410 PF01565 FAD binding domain BCE_1411 PF05651 Putative sugar diacid recognition BCE_1411 PF13556 PucR C-terminal helix-turn-helix domain BCE_1411 PF17853 GGDEF-like domain BCE_1413 PF00072 Response regulator receiver domain BCE_1413 PF00486 Transcriptional regulatory protein, C terminal BCE_1414 PF00989 PAS fold BCE_1414 PF00512 His Kinase A (phospho-acceptor) domain BCE_1414 PF00672 HAMP domain BCE_1414 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_1414 PF18698 Histidine kinase sensor domain BCE_1415 PF00392 Bacterial regulatory proteins, gntR family BCE_1415 PF07729 FCD domain BCE_1416 PF02754 Cysteine-rich domain BCE_1417 PF02589 LUD domain BCE_1417 PF13183 4Fe-4S dicluster domain BCE_1417 PF11870 Domain of unknown function (DUF3390) BCE_1418 PF02589 LUD domain BCE_1419 PF06750 Bacterial Peptidase A24 N-terminal domain BCE_1419 PF01478 Type IV leader peptidase family BCE_1421 PF01226 Formate/nitrite transporter BCE_1422 PF03741 Integral membrane protein TerC family BCE_1423 PF02386 Cation transport protein BCE_1424 PF00269 Small, acid-soluble spore proteins, alpha/beta type BCE_1425 PF01575 MaoC like domain BCE_1430 PF00561 alpha/beta hydrolase fold BCE_1432 PF02386 Cation transport protein BCE_1437 PF00005 ABC transporter BCE_1437 PF08402 TOBE domain BCE_1438 PF00528 Binding-protein-dependent transport system inner membrane component BCE_1439 PF13419 Haloacid dehalogenase-like hydrolase BCE_1440 PF00266 Aminotransferase class-V BCE_1442 PF08220 DeoR-like helix-turn-helix domain BCE_1442 PF00455 DeoR C terminal sensor domain BCE_1444 PF01520 N-acetylmuramoyl-L-alanine amidase BCE_1444 PF00395 S-layer homology domain BCE_1445 PF00596 Class II Aldolase and Adducin N-terminal domain BCE_1447 PF04748 Divergent polysaccharide deacetylase BCE_1448 PF09388 Spo0E like sporulation regulatory protein BCE_1449 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_1449 PF02743 Cache domain BCE_1449 PF00512 His Kinase A (phospho-acceptor) domain BCE_1450 PF01047 MarR family BCE_1453 PF12867 DinB superfamily BCE_1455 PF00512 His Kinase A (phospho-acceptor) domain BCE_1455 PF00989 PAS fold BCE_1455 PF13188 PAS domain BCE_1455 PF13426 PAS domain BCE_1455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_1458 PF06508 Queuosine biosynthesis protein QueC BCE_1459 PF01242 6-pyruvoyl tetrahydropterin synthase BCE_1460 PF04055 Radical SAM superfamily BCE_1461 PF14489 QueF-like protein BCE_1469 PF07972 NrdI Flavodoxin like BCE_1471 PF00268 Ribonucleotide reductase, small chain BCE_1472 PF00392 Bacterial regulatory proteins, gntR family BCE_1473 PF00005 ABC transporter BCE_1475 PF00005 ABC transporter BCE_1477 PF02517 CPBP intramembrane metalloprotease BCE_1479 PF01037 Lrp/AsnC ligand binding domain BCE_1482 PF02016 LD-carboxypeptidase N-terminal domain BCE_1482 PF17676 LD-carboxypeptidase C-terminal domain BCE_1483 PF03060 Nitronate monooxygenase BCE_1484 PF04914 DltD protein BCE_1485 PF00550 Phosphopantetheine attachment site BCE_1486 PF03062 MBOAT, membrane-bound O-acyltransferase family BCE_1487 PF13193 AMP-binding enzyme C-terminal domain BCE_1487 PF00501 AMP-binding enzyme BCE_1490 PF01546 Peptidase family M20/M25/M40 BCE_1490 PF07687 Peptidase dimerisation domain BCE_1492 PF00258 Flavodoxin BCE_1496 PF01636 Phosphotransferase enzyme family BCE_1501 PF01554 MatE BCE_1502 PF02673 Bacitracin resistance protein BacA BCE_1506 PF01047 MarR family BCE_1508 PF00375 Sodium:dicarboxylate symporter family BCE_1509 PF02386 Cation transport protein BCE_1511 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BCE_1513 PF03698 Uncharacterised protein family (UPF0180) BCE_1516 PF01063 Amino-transferase class IV BCE_1517 PF00205 Thiamine pyrophosphate enzyme, central domain BCE_1517 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BCE_1517 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BCE_1518 PF10369 Small subunit of acetolactate synthase BCE_1518 PF01842 ACT domain BCE_1519 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BCE_1519 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BCE_1520 PF00682 HMGL-like BCE_1520 PF08502 LeuA allosteric (dimerisation) domain BCE_1521 PF00180 Isocitrate/isopropylmalate dehydrogenase BCE_1522 PF00330 Aconitase family (aconitate hydratase) BCE_1523 PF00694 Aconitase C-terminal domain BCE_1524 PF13393 Histidyl-tRNA synthetase BCE_1525 PF01634 ATP phosphoribosyltransferase BCE_1526 PF00815 Histidinol dehydrogenase BCE_1527 PF00475 Imidazoleglycerol-phosphate dehydratase BCE_1528 PF00117 Glutamine amidotransferase class-I BCE_1529 PF00977 Histidine biosynthesis protein BCE_1530 PF00977 Histidine biosynthesis protein BCE_1531 PF01502 Phosphoribosyl-AMP cyclohydrolase BCE_1532 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BCE_1533 PF02811 PHP domain BCE_1535 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BCE_1535 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BCE_1536 PF01066 CDP-alcohol phosphatidyltransferase BCE_1538 PF00884 Sulfatase BCE_1542 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BCE_1542 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BCE_1544 PF01507 Phosphoadenosine phosphosulfate reductase family BCE_1545 PF14306 PUA-like domain BCE_1545 PF01747 ATP-sulfurylase BCE_1547 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BCE_1547 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BCE_1549 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BCE_1550 PF01903 CbiX BCE_1552 PF00209 Sodium:neurotransmitter symporter family BCE_1555 PF00375 Sodium:dicarboxylate symporter family BCE_1557 PF03553 Na+/H+ antiporter family BCE_1561 PF09922 Cell wall-active antibiotics response 4TMS YvqF BCE_1562 PF07730 Histidine kinase BCE_1562 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_1562 PF00672 HAMP domain BCE_1563 PF00072 Response regulator receiver domain BCE_1563 PF00196 Bacterial regulatory proteins, luxR family BCE_1565 PF05525 Branched-chain amino acid transport protein BCE_1567 PF08241 Methyltransferase domain BCE_1571 PF00970 Oxidoreductase FAD-binding domain BCE_1571 PF00042 Globin BCE_1571 PF00175 Oxidoreductase NAD-binding domain BCE_1575 PF01925 Sulfite exporter TauE/SafE BCE_1576 PF01384 Phosphate transporter family BCE_1577 PF01865 Protein of unknown function DUF47 BCE_1578 PF00912 Transglycosylase BCE_1578 PF00905 Penicillin binding protein transpeptidase domain BCE_1583 PF00512 His Kinase A (phospho-acceptor) domain BCE_1583 PF00989 PAS fold BCE_1583 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_1584 PF01904 Protein of unknown function DUF72 BCE_1586 PF00589 Phage integrase family BCE_1587 PF16736 Single Cache-like BCE_1587 PF00989 PAS fold BCE_1587 PF00512 His Kinase A (phospho-acceptor) domain BCE_1587 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_1588 PF01048 Phosphorylase superfamily BCE_1590 PF09924 Uncharacterised conserved protein (DUF2156) BCE_1590 PF03706 Lysylphosphatidylglycerol synthase TM region BCE_1593 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BCE_1593 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BCE_1594 PF07943 Penicillin-binding protein 5, C-terminal domain BCE_1594 PF00768 D-alanyl-D-alanine carboxypeptidase BCE_1595 PF07670 Nucleoside recognition BCE_1596 PF07670 Nucleoside recognition BCE_1597 PF00849 RNA pseudouridylate synthase BCE_1597 PF01479 S4 domain BCE_1598 PF00578 AhpC/TSA family BCE_1599 PF05140 ResB-like family BCE_1600 PF01578 Cytochrome C assembly protein BCE_1601 PF00486 Transcriptional regulatory protein, C terminal BCE_1601 PF00072 Response regulator receiver domain BCE_1602 PF18698 Histidine kinase sensor domain BCE_1602 PF00672 HAMP domain BCE_1602 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_1602 PF00512 His Kinase A (phospho-acceptor) domain BCE_1602 PF00989 PAS fold BCE_1603 PF01923 Cobalamin adenosyltransferase BCE_1604 PF01551 Peptidase family M23 BCE_1606 PF12822 ECF transporter, substrate-specific component BCE_1609 PF00271 Helicase conserved C-terminal domain BCE_1609 PF00270 DEAD/DEAH box helicase BCE_1610 PF00270 DEAD/DEAH box helicase BCE_1610 PF00271 Helicase conserved C-terminal domain BCE_1611 PF02517 CPBP intramembrane metalloprotease BCE_1613 PF00149 Calcineurin-like phosphoesterase BCE_1614 PF13411 MerR HTH family regulatory protein BCE_1616 PF05389 Negative regulator of genetic competence (MecA) BCE_1617 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BCE_1617 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BCE_1622 PF00710 Asparaginase, N-terminal BCE_1622 PF17763 Glutaminase/Asparaginase C-terminal domain BCE_1623 PF02224 Cytidylate kinase BCE_1625 PF00575 S1 RNA binding domain BCE_1626 PF01070 FMN-dependent dehydrogenase BCE_1627 PF14140 YpzI-like protein BCE_1629 PF14045 YIEGIA protein BCE_1631 PF01926 50S ribosome-binding GTPase BCE_1631 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BCE_1632 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BCE_1632 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BCE_1634 PF10966 Protein of unknown function (DUF2768) BCE_1636 PF09547 Stage IV sporulation protein A (spore_IV_A) BCE_1637 PF00216 Bacterial DNA-binding protein BCE_1638 PF01227 GTP cyclohydrolase I BCE_1639 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 BCE_1640 PF01209 ubiE/COQ5 methyltransferase family BCE_1641 PF00348 Polyprenyl synthetase BCE_1642 PF00334 Nucleoside diphosphate kinase BCE_1643 PF01264 Chorismate synthase BCE_1644 PF01761 3-dehydroquinate synthase BCE_1645 PF00155 Aminotransferase class I and II BCE_1647 PF08858 IDEAL domain BCE_1647 PF08864 UPF0302 domain BCE_1648 PF10673 Protein of unknown function (DUF2487) BCE_1649 PF00355 Rieske [2Fe-2S] domain BCE_1650 PF00033 Cytochrome b/b6/petB BCE_1651 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BCE_1651 PF00032 Cytochrome b(C-terminal)/b6/petD BCE_1653 PF07187 Protein of unknown function (DUF1405) BCE_1655 PF09577 Sporulation protein YpjB (SpoYpjB) BCE_1656 PF04298 Putative neutral zinc metallopeptidase BCE_1658 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BCE_1658 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BCE_1660 PF03819 MazG nucleotide pyrophosphohydrolase domain BCE_1661 PF01113 Dihydrodipicolinate reductase, N-terminus BCE_1661 PF05173 Dihydrodipicolinate reductase, C-terminus BCE_1662 PF02142 MGS-like domain BCE_1663 PF02585 GlcNAc-PI de-N-acetylase BCE_1664 PF00534 Glycosyl transferases group 1 BCE_1664 PF13439 Glycosyltransferase Family 4 BCE_1665 PF01743 Poly A polymerase head domain BCE_1665 PF12627 Probable RNA and SrmB- binding site of polymerase A BCE_1665 PF13735 tRNA nucleotidyltransferase domain 2 putative BCE_1666 PF02237 Biotin protein ligase C terminal domain BCE_1666 PF03099 Biotin/lipoate A/B protein ligase family BCE_1666 PF08279 HTH domain BCE_1668 PF02548 Ketopantoate hydroxymethyltransferase BCE_1669 PF02569 Pantoate-beta-alanine ligase BCE_1670 PF02261 Aspartate decarboxylase BCE_1671 PF13307 Helicase C-terminal domain BCE_1671 PF04851 Type III restriction enzyme, res subunit BCE_1671 PF00929 Exonuclease BCE_1672 PF14084 Protein of unknown function (DUF4264) BCE_1674 PF00155 Aminotransferase class I and II BCE_1675 PF07261 Replication initiation and membrane attachment BCE_1676 PF00730 HhH-GPD superfamily base excision DNA repair protein BCE_1676 PF00633 Helix-hairpin-helix motif BCE_1676 PF10576 Iron-sulfur binding domain of endonuclease III BCE_1678 PF00905 Penicillin binding protein transpeptidase domain BCE_1678 PF00912 Transglycosylase BCE_1679 PF03838 Recombination protein U BCE_1680 PF10720 Protein of unknown function (DUF2515) BCE_1688 PF06908 YspA SLOG family BCE_1689 PF05103 DivIVA protein BCE_1690 PF01170 Putative RNA methylase family UPF0020 BCE_1690 PF02926 THUMP domain BCE_1692 PF13307 Helicase C-terminal domain BCE_1693 PF02074 Carboxypeptidase Taq (M32) metallopeptidase BCE_1695 PF00557 Metallopeptidase family M24 BCE_1697 PF00156 Phosphoribosyl transferase domain BCE_1698 PF00860 Permease family BCE_1699 PF04235 Protein of unknown function (DUF418) BCE_1701 PF00350 Dynamin family BCE_1703 PF00583 Acetyltransferase (GNAT) family BCE_1704 PF10752 Protein of unknown function (DUF2533) BCE_1705 PF00581 Rhodanese-like domain BCE_1706 PF00689 Cation transporting ATPase, C-terminus BCE_1706 PF00690 Cation transporter/ATPase, N-terminus BCE_1707 PF01367 5'-3' exonuclease, C-terminal SAM fold BCE_1707 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BCE_1710 PF18014 Acetyltransferase (GNAT) domain BCE_1710 PF13673 Acetyltransferase (GNAT) domain BCE_1714 PF13456 Reverse transcriptase-like BCE_1715 PF01263 Aldose 1-epimerase BCE_1720 PF00313 'Cold-shock' DNA-binding domain BCE_1721 PF08892 YqcI/YcgG family BCE_1722 PF01810 LysE type translocator BCE_1725 PF04341 Protein of unknown function, DUF485 BCE_1726 PF00474 Sodium:solute symporter family BCE_1727 PF00202 Aminotransferase class-III BCE_1729 PF00999 Sodium/hydrogen exchanger family BCE_1730 PF00753 Metallo-beta-lactamase superfamily BCE_1730 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BCE_1730 PF17770 Ribonuclease J C-terminal domain BCE_1731 PF13411 MerR HTH family regulatory protein BCE_1731 PF06445 GyrI-like small molecule binding domain BCE_1733 PF04239 Protein of unknown function (DUF421) BCE_1734 PF02698 DUF218 domain BCE_1736 PF00881 Nitroreductase family BCE_1738 PF07690 Major Facilitator Superfamily BCE_1744 PF17209 Hfq protein BCE_1746 PF01618 MotA/TolQ/ExbB proton channel family BCE_1747 PF00691 OmpA family BCE_1747 PF13677 Membrane MotB of proton-channel complex MotA/MotB BCE_1748 PF00072 Response regulator receiver domain BCE_1749 PF07194 P2 response regulator binding domain BCE_1749 PF01627 Hpt domain BCE_1749 PF01584 CheW-like domain BCE_1749 PF02895 Signal transducing histidine kinase, homodimeric domain BCE_1749 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_1750 PF04509 CheC-like family BCE_1750 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BCE_1754 PF03705 CheR methyltransferase, all-alpha domain BCE_1754 PF01739 CheR methyltransferase, SAM binding domain BCE_1758 PF00460 Flagella basal body rod protein BCE_1758 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BCE_1759 PF00669 Bacterial flagellin N-terminal helical region BCE_1759 PF00700 Bacterial flagellin C-terminal helical region BCE_1760 PF07196 Flagellin hook IN motif BCE_1760 PF07195 Flagellar hook-associated protein 2 C-terminus BCE_1760 PF02465 Flagellar hook-associated protein 2 N-terminus BCE_1763 PF00460 Flagella basal body rod protein BCE_1764 PF00460 Flagella basal body rod protein BCE_1764 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BCE_1765 PF02049 Flagellar hook-basal body complex protein FliE BCE_1766 PF08345 Flagellar M-ring protein C-terminal BCE_1766 PF01514 Secretory protein of YscJ/FliF family BCE_1767 PF14842 FliG N-terminal domain BCE_1767 PF14841 FliG middle domain BCE_1767 PF01706 FliG C-terminal domain BCE_1769 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BCE_1769 PF02874 ATP synthase alpha/beta family, beta-barrel domain BCE_1769 PF18269 T3SS EscN ATPase C-terminal domain BCE_1773 PF07559 Flagellar basal body protein FlaE BCE_1773 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BCE_1773 PF00460 Flagella basal body rod protein BCE_1777 PF00072 Response regulator receiver domain BCE_1777 PF01584 CheW-like domain BCE_1778 PF12181 DNA binding domain of the motility gene repressor (MogR) BCE_1779 PF00700 Bacterial flagellin C-terminal helical region BCE_1779 PF00669 Bacterial flagellin N-terminal helical region BCE_1780 PF00700 Bacterial flagellin C-terminal helical region BCE_1780 PF00669 Bacterial flagellin N-terminal helical region BCE_1781 PF01464 Transglycosylase SLT domain BCE_1783 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BCE_1783 PF02154 Flagellar motor switch protein FliM BCE_1784 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BCE_1784 PF04509 CheC-like family BCE_1786 PF00813 FliP family BCE_1787 PF01313 Bacterial export proteins, family 3 BCE_1790 PF00771 FHIPEP family BCE_1791 PF00448 SRP54-type protein, GTPase domain BCE_1792 PF00460 Flagella basal body rod protein BCE_1792 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BCE_1793 PF02272 DHHA1 domain BCE_1793 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BCE_1793 PF01411 tRNA synthetases class II (A) BCE_1798 PF00440 Bacterial regulatory proteins, tetR family BCE_1798 PF17932 Tetracyclin repressor-like, C-terminal domain BCE_1799 PF17329 Family of unknown function (DUF5367) BCE_1802 PF03992 Antibiotic biosynthesis monooxygenase BCE_1804 PF04203 Sortase domain BCE_1805 PF04203 Sortase domain BCE_1806 PF08141 Small acid-soluble spore protein H family BCE_1811 PF08402 TOBE domain BCE_1811 PF00005 ABC transporter BCE_1813 PF00528 Binding-protein-dependent transport system inner membrane component BCE_1814 PF00753 Metallo-beta-lactamase superfamily BCE_1814 PF12706 Beta-lactamase superfamily domain BCE_1816 PF10787 Uncharacterised protein from bacillus cereus group BCE_1821 PF13021 Domain of unknown function (DUF3885) BCE_1822 PF00300 Histidine phosphatase superfamily (branch 1) BCE_1824 PF00561 alpha/beta hydrolase fold BCE_1828 PF13537 Glutamine amidotransferase domain BCE_1828 PF00733 Asparagine synthase BCE_1832 PF01545 Cation efflux family BCE_1832 PF16916 Dimerisation domain of Zinc Transporter BCE_1834 PF07729 FCD domain BCE_1834 PF00392 Bacterial regulatory proteins, gntR family BCE_1835 PF00892 EamA-like transporter family BCE_1836 PF07683 Cobalamin synthesis protein cobW C-terminal domain BCE_1836 PF02492 CobW/HypB/UreG, nucleotide-binding domain BCE_1837 PF03773 Predicted permease BCE_1839 PF00535 Glycosyl transferase family 2 BCE_1840 PF03553 Na+/H+ antiporter family BCE_1841 PF10415 Fumarase C C-terminus BCE_1841 PF00206 Lyase BCE_1846 PF01554 MatE BCE_1847 PF03575 Peptidase family S51 BCE_1852 PF00578 AhpC/TSA family BCE_1855 PF00291 Pyridoxal-phosphate dependent enzyme BCE_1856 PF04286 Protein of unknown function (DUF445) BCE_1863 PF00072 Response regulator receiver domain BCE_1863 PF00196 Bacterial regulatory proteins, luxR family BCE_1864 PF13492 GAF domain BCE_1864 PF13185 GAF domain BCE_1864 PF07730 Histidine kinase BCE_1864 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_1865 PF00005 ABC transporter BCE_1869 PF13091 PLD-like domain BCE_1870 PF00696 Amino acid kinase family BCE_1872 PF10415 Fumarase C C-terminus BCE_1872 PF00206 Lyase BCE_1873 PF03949 Malic enzyme, NAD binding domain BCE_1873 PF00390 Malic enzyme, N-terminal domain BCE_1874 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_1875 PF08664 YcbB domain BCE_1875 PF00072 Response regulator receiver domain BCE_1877 PF12419 SNF2 Helicase protein BCE_1877 PF00271 Helicase conserved C-terminal domain BCE_1877 PF00176 SNF2 family N-terminal domain BCE_1880 PF03590 Aspartate-ammonia ligase BCE_1881 PF01381 Helix-turn-helix BCE_1883 PF13840 ACT domain BCE_1883 PF00696 Amino acid kinase family BCE_1887 PF14158 YndJ-like protein BCE_1888 PF00293 NUDIX domain BCE_1889 PF00395 S-layer homology domain BCE_1889 PF02368 Bacterial Ig-like domain (group 2) BCE_1889 PF13205 Bacterial Ig-like domain BCE_1892 PF07690 Major Facilitator Superfamily BCE_1897 PF17912 MalK OB fold domain BCE_1897 PF03459 TOBE domain BCE_1897 PF00005 ABC transporter BCE_1898 PF13556 PucR C-terminal helix-turn-helix domain BCE_1899 PF01547 Bacterial extracellular solute-binding protein BCE_1900 PF00528 Binding-protein-dependent transport system inner membrane component BCE_1901 PF00528 Binding-protein-dependent transport system inner membrane component BCE_1904 PF01380 SIS domain BCE_1905 PF01979 Amidohydrolase family BCE_1906 PF01116 Fructose-bisphosphate aldolase class-II BCE_1907 PF00294 pfkB family carbohydrate kinase BCE_1908 PF00480 ROK family BCE_1909 PF03976 Polyphosphate kinase 2 (PPK2) BCE_1910 PF10400 Virulence activator alpha C-term BCE_1910 PF03551 Transcriptional regulator PadR-like family BCE_1911 PF07690 Major Facilitator Superfamily BCE_1913 PF07690 Major Facilitator Superfamily BCE_1914 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BCE_1914 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BCE_1916 PF13167 GTP-binding GTPase N-terminal BCE_1916 PF01926 50S ribosome-binding GTPase BCE_1916 PF16360 GTP-binding GTPase Middle Region BCE_1917 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCE_1918 PF07690 Major Facilitator Superfamily BCE_1919 PF00291 Pyridoxal-phosphate dependent enzyme BCE_1922 PF14667 Polysaccharide biosynthesis C-terminal domain BCE_1922 PF01943 Polysaccharide biosynthesis protein BCE_1923 PF00209 Sodium:neurotransmitter symporter family BCE_1924 PF03422 Carbohydrate binding module (family 6) BCE_1924 PF00457 Glycosyl hydrolases family 11 BCE_1924 PF01522 Polysaccharide deacetylase BCE_1926 PF04239 Protein of unknown function (DUF421) BCE_1931 PF01625 Peptide methionine sulfoxide reductase BCE_1933 PF01063 Amino-transferase class IV BCE_1934 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BCE_1934 PF00205 Thiamine pyrophosphate enzyme, central domain BCE_1934 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BCE_1936 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BCE_1936 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BCE_1937 PF00920 Dehydratase family BCE_1938 PF00291 Pyridoxal-phosphate dependent enzyme BCE_1938 PF00585 C-terminal regulatory domain of Threonine dehydratase BCE_1940 PF09587 Bacterial capsule synthesis protein PGA_cap BCE_1943 PF07690 Major Facilitator Superfamily BCE_1944 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BCE_1947 PF00072 Response regulator receiver domain BCE_1947 PF04397 LytTr DNA-binding domain BCE_1948 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BCE_1948 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BCE_1951 PF01979 Amidohydrolase family BCE_1953 PF13026 Protein of unknown function (DUF3887) BCE_1953 PF12146 Serine aminopeptidase, S33 BCE_1954 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCE_1955 PF13302 Acetyltransferase (GNAT) domain BCE_1956 PF00486 Transcriptional regulatory protein, C terminal BCE_1956 PF00072 Response regulator receiver domain BCE_1957 PF00512 His Kinase A (phospho-acceptor) domain BCE_1957 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_1960 PF01566 Natural resistance-associated macrophage protein BCE_1964 PF08546 Ketopantoate reductase PanE/ApbA C terminal BCE_1964 PF02558 Ketopantoate reductase PanE/ApbA BCE_1966 PF13520 Amino acid permease BCE_1969 PF05791 Bacillus haemolytic enterotoxin (HBL) BCE_1974 PF04198 Putative sugar-binding domain BCE_1975 PF01791 DeoC/LacD family aldolase BCE_1976 PF01773 Na+ dependent nucleoside transporter N-terminus BCE_1976 PF07662 Na+ dependent nucleoside transporter C-terminus BCE_1977 PF00591 Glycosyl transferase family, a/b domain BCE_1977 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BCE_1977 PF02885 Glycosyl transferase family, helical bundle domain BCE_1978 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BCE_1980 PF07301 Protein of unknown function (DUF1453) BCE_1981 PF05979 Bacterial protein of unknown function (DUF896) BCE_1982 PF05195 Aminopeptidase P, N-terminal domain BCE_1982 PF00557 Metallopeptidase family M24 BCE_1986 PF00440 Bacterial regulatory proteins, tetR family BCE_1987 PF00005 ABC transporter BCE_1987 PF13732 Domain of unknown function (DUF4162) BCE_1988 PF13732 Domain of unknown function (DUF4162) BCE_1988 PF00005 ABC transporter BCE_1993 PF02525 Flavodoxin-like fold BCE_1994 PF05525 Branched-chain amino acid transport protein BCE_1997 PF13115 YtkA-like BCE_1997 PF05425 Copper resistance protein D BCE_1997 PF04234 CopC domain BCE_1998 PF07987 Domain of unkown function (DUF1775) BCE_1999 PF00892 EamA-like transporter family BCE_2000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCE_2000 PF03466 LysR substrate binding domain BCE_2001 PF02082 Transcriptional regulator BCE_2002 PF01323 DSBA-like thioredoxin domain BCE_2003 PF00881 Nitroreductase family BCE_2005 PF01425 Amidase BCE_2006 PF01594 AI-2E family transporter BCE_2007 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BCE_2007 PF00056 lactate/malate dehydrogenase, NAD binding domain BCE_2008 PF01593 Flavin containing amine oxidoreductase BCE_2009 PF02492 CobW/HypB/UreG, nucleotide-binding domain BCE_2009 PF07683 Cobalamin synthesis protein cobW C-terminal domain BCE_2011 PF00005 ABC transporter BCE_2011 PF12399 Branched-chain amino acid ATP-binding cassette transporter BCE_2012 PF00005 ABC transporter BCE_2013 PF02653 Branched-chain amino acid transport system / permease component BCE_2015 PF03466 LysR substrate binding domain BCE_2015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCE_2017 PF14552 Tautomerase enzyme BCE_2019 PF01047 MarR family BCE_2021 PF01654 Cytochrome bd terminal oxidase subunit I BCE_2022 PF02322 Cytochrome bd terminal oxidase subunit II BCE_2023 PF00664 ABC transporter transmembrane region BCE_2023 PF00005 ABC transporter BCE_2024 PF00005 ABC transporter BCE_2024 PF00664 ABC transporter transmembrane region BCE_2026 PF00535 Glycosyl transferase family 2 BCE_2027 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BCE_2028 PF00132 Bacterial transferase hexapeptide (six repeats) BCE_2033 PF02016 LD-carboxypeptidase N-terminal domain BCE_2033 PF17676 LD-carboxypeptidase C-terminal domain BCE_2034 PF07943 Penicillin-binding protein 5, C-terminal domain BCE_2034 PF00768 D-alanyl-D-alanine carboxypeptidase BCE_2037 PF01476 LysM domain BCE_2037 PF00877 NlpC/P60 family BCE_2040 PF00664 ABC transporter transmembrane region BCE_2040 PF00005 ABC transporter BCE_2041 PF00072 Response regulator receiver domain BCE_2041 PF00486 Transcriptional regulatory protein, C terminal BCE_2042 PF00989 PAS fold BCE_2042 PF00512 His Kinase A (phospho-acceptor) domain BCE_2042 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_2042 PF16736 Single Cache-like BCE_2044 PF00106 short chain dehydrogenase BCE_2046 PF04439 Streptomycin adenylyltransferase BCE_2047 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain BCE_2047 PF01522 Polysaccharide deacetylase BCE_2049 PF00293 NUDIX domain BCE_2051 PF00742 Homoserine dehydrogenase BCE_2051 PF01842 ACT domain BCE_2051 PF03447 Homoserine dehydrogenase, NAD binding domain BCE_2052 PF00291 Pyridoxal-phosphate dependent enzyme BCE_2053 PF00288 GHMP kinases N terminal domain BCE_2053 PF08544 GHMP kinases C terminal BCE_2056 PF03816 Cell envelope-related transcriptional attenuator domain BCE_2059 PF00072 Response regulator receiver domain BCE_2059 PF00486 Transcriptional regulatory protein, C terminal BCE_2060 PF00989 PAS fold BCE_2060 PF00512 His Kinase A (phospho-acceptor) domain BCE_2060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_2060 PF16736 Single Cache-like BCE_2061 PF01522 Polysaccharide deacetylase BCE_2063 PF02308 MgtC family BCE_2064 PF00583 Acetyltransferase (GNAT) family BCE_2065 PF00269 Small, acid-soluble spore proteins, alpha/beta type BCE_2067 PF01810 LysE type translocator BCE_2070 PF01734 Patatin-like phospholipase BCE_2074 PF13344 Haloacid dehalogenase-like hydrolase BCE_2074 PF00293 NUDIX domain BCE_2075 PF02540 NAD synthase BCE_2076 PF02687 FtsX-like permease family BCE_2077 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BCE_2077 PF18277 AbrB C-terminal domain BCE_2078 PF00082 Subtilase family BCE_2079 PF01022 Bacterial regulatory protein, arsR family BCE_2080 PF00248 Aldo/keto reductase family BCE_2081 PF07690 Major Facilitator Superfamily BCE_2087 PF03193 RsgA GTPase BCE_2088 PF00672 HAMP domain BCE_2088 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCE_2088 PF02743 Cache domain BCE_2092 PF00210 Ferritin-like domain BCE_2096 PF00296 Luciferase-like monooxygenase BCE_2098 PF01593 Flavin containing amine oxidoreductase BCE_2099 PF13302 Acetyltransferase (GNAT) domain BCE_2100 PF00248 Aldo/keto reductase family BCE_2101 PF02492 CobW/HypB/UreG, nucleotide-binding domain BCE_2101 PF07683 Cobalamin synthesis protein cobW C-terminal domain BCE_2102 PF00583 Acetyltransferase (GNAT) family BCE_2103 PF01297 Zinc-uptake complex component A periplasmic BCE_2103 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment BCE_2105 PF13460 NAD(P)H-binding BCE_2106 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BCE_2107 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BCE_2107 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BCE_2110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCE_2111 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCE_2113 PF00300 Histidine phosphatase superfamily (branch 1) BCE_2115 PF08757 CotH kinase protein BCE_2116 PF00293 NUDIX domain BCE_2117 PF09335 SNARE associated Golgi protein BCE_2118 PF14667 Polysaccharide biosynthesis C-terminal domain BCE_2118 PF01943 Polysaccharide biosynthesis protein BCE_2120 PF03773 Predicted permease BCE_2121 PF09323 Domain of unknown function (DUF1980) BCE_2122 PF03061 Thioesterase superfamily BCE_2123 PF13091 PLD-like domain BCE_2126 PF13460 NAD(P)H-binding BCE_2127 PF04306 Protein of unknown function (DUF456) BCE_2128 PF03471 Transporter associated domain BCE_2128 PF01595 Cyclin M transmembrane N-terminal domain BCE_2128 PF00571 CBS domain BCE_2133 PF05525 Branched-chain amino acid transport protein BCE_2135 PF01588 Putative tRNA binding domain BCE_2139 PF07454 Stage II sporulation protein P (SpoIIP) BCE_2141 PF02557 D-alanyl-D-alanine carboxypeptidase BCE_2143 PF01425 Amidase BCE_2144 PF07690 Major Facilitator Superfamily BCE_2146 PF01145 SPFH domain / Band 7 family BCE_2148 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal BCE_2148 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal BCE_2150 PF06574 FAD synthetase BCE_2151 PF06052 3-hydroxyanthranilic acid dioxygenase BCE_2153 PF01042 Endoribonuclease L-PSP BCE_2154 PF00171 Aldehyde dehydrogenase family BCE_2155 PF01557 Fumarylacetoacetate (FAA) hydrolase family BCE_2156 PF01118 Semialdehyde dehydrogenase, NAD binding domain BCE_2156 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation BCE_2157 PF00682 HMGL-like BCE_2157 PF07836 DmpG-like communication domain BCE_2159 PF01361 Tautomerase enzyme BCE_2163 PF01168 Alanine racemase, N-terminal domain BCE_2163 PF00842 Alanine racemase, C-terminal domain BCE_2168 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BCE_2169 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BCE_2169 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BCE_2170 PF00155 Aminotransferase class I and II BCE_2170 PF00392 Bacterial regulatory proteins, gntR family BCE_2176 PF00583 Acetyltransferase (GNAT) family BCE_2181 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BCE_2186 PF01209 ubiE/COQ5 methyltransferase family BCE_2187 PF01268 Formate--tetrahydrofolate ligase BCE_2189 PF00270 DEAD/DEAH box helicase BCE_2189 PF00271 Helicase conserved C-terminal domain BCE_2192 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCE_2194 PF08240 Alcohol dehydrogenase GroES-like domain BCE_2194 PF00107 Zinc-binding dehydrogenase BCE_2195 PF08281 Sigma-70, region 4 BCE_2195 PF04542 Sigma-70 region 2 BCE_2198 PF03109 ABC1 family BCE_2202 PF00255 Glutathione peroxidase BCE_2203 PF11992 Domain of unknown function (DUF3488) BCE_2203 PF01841 Transglutaminase-like superfamily BCE_2203 PF13559 Domain of unknown function (DUF4129) BCE_2204 PF01882 Protein of unknown function DUF58 BCE_2205 PF17863 AAA lid domain BCE_2205 PF07726 ATPase family associated with various cellular activities (AAA) BCE_2206 PF14710 Respiratory nitrate reductase alpha N-terminal BCE_2206 PF01568 Molydopterin dinucleotide binding domain BCE_2206 PF00384 Molybdopterin oxidoreductase BCE_2207 PF14710 Respiratory nitrate reductase alpha N-terminal BCE_2207 PF01568 Molydopterin dinucleotide binding domain BCE_2207 PF00384 Molybdopterin oxidoreductase BCE_2208 PF00480 ROK family BCE_2210 PF01261 Xylose isomerase-like TIM barrel BCE_2211 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BCE_2211 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BCE_2212 PF01263 Aldose 1-epimerase BCE_2214 PF00083 Sugar (and other) transporter BCE_2222 PF04232 Stage V sporulation protein S (SpoVS) BCE_2224 PF01966 HD domain BCE_2225 PF00005 ABC transporter BCE_2225 PF16326 ABC transporter C-terminal domain BCE_2225 PF12848 ABC transporter BCE_2228 PF00436 Single-strand binding protein family BCE_2229 PF00440 Bacterial regulatory proteins, tetR family BCE_2230 PF01494 FAD binding domain BCE_2231 PF13769 Virulence factor BCE_2231 PF08712 Scaffold protein Nfu/NifU N terminal BCE_2233 PF06491 Disulphide isomerase BCE_2234 PF04445 Putative SAM-dependent methyltransferase BCE_2235 PF03485 Arginyl tRNA synthetase N terminal domain BCE_2235 PF00750 tRNA synthetases class I (R) BCE_2235 PF05746 DALR anticodon binding domain BCE_2236 PF00750 tRNA synthetases class I (R) BCE_2236 PF05746 DALR anticodon binding domain BCE_2236 PF03485 Arginyl tRNA synthetase N terminal domain BCE_2241 PF08264 Anticodon-binding domain of tRNA BCE_2241 PF00133 tRNA synthetases class I (I, L, M and V) BCE_2244 PF08245 Mur ligase middle domain BCE_2244 PF02875 Mur ligase family, glutamate ligase domain BCE_2244 PF01225 Mur ligase family, catalytic domain BCE_2246 PF00209 Sodium:neurotransmitter symporter family BCE_2249 PF10997 Alternate to MurJ BCE_2250 PF13419 Haloacid dehalogenase-like hydrolase BCE_2252 PF00465 Iron-containing alcohol dehydrogenase BCE_2253 PF01177 Asp/Glu/Hydantoin racemase BCE_2254 PF01980 tRNA-methyltransferase O BCE_2255 PF00583 Acetyltransferase (GNAT) family BCE_2258 PF00005 ABC transporter BCE_2259 PF05975 Bacterial ABC transporter protein EcsB BCE_2261 PF14005 YpjP-like protein BCE_2262 PF13419 Haloacid dehalogenase-like hydrolase BCE_2264 PF07930 D-aminopeptidase, domain B BCE_2264 PF00144 Beta-lactamase BCE_2266 PF00303 Thymidylate synthase BCE_2267 PF00186 Dihydrofolate reductase BCE_2268 PF00905 Penicillin binding protein transpeptidase domain BCE_2268 PF03717 Penicillin-binding Protein dimerisation domain BCE_2268 PF05223 NTF2-like N-terminal transpeptidase domain BCE_2269 PF02525 Flavodoxin-like fold BCE_2270 PF01553 Acyltransferase BCE_2271 PF03006 Haemolysin-III related BCE_2272 PF02416 mttA/Hcf106 family BCE_2273 PF00902 Sec-independent protein translocase protein (TatC) BCE_2276 PF02645 Uncharacterised protein, DegV family COG1307 BCE_2278 PF02630 SCO1/SenC BCE_2279 PF00011 Hsp20/alpha crystallin family BCE_2280 PF00733 Asparagine synthase BCE_2280 PF13537 Glutamine amidotransferase domain BCE_2283 PF01497 Periplasmic binding protein BCE_2285 PF01063 Amino-transferase class IV BCE_2286 PF00881 Nitroreductase family BCE_2288 PF00857 Isochorismatase family BCE_2289 PF00293 NUDIX domain BCE_2290 PF00011 Hsp20/alpha crystallin family BCE_2291 PF00924 Mechanosensitive ion channel BCE_2292 PF13185 GAF domain BCE_2292 PF07730 Histidine kinase BCE_2293 PF00072 Response regulator receiver domain BCE_2293 PF00196 Bacterial regulatory proteins, luxR family BCE_2294 PF00144 Beta-lactamase BCE_2294 PF11954 Domain of unknown function (DUF3471) BCE_2295 PF01418 Helix-turn-helix domain, rpiR family BCE_2295 PF01380 SIS domain BCE_2296 PF00107 Zinc-binding dehydrogenase BCE_2296 PF08240 Alcohol dehydrogenase GroES-like domain BCE_2300 PF01037 Lrp/AsnC ligand binding domain BCE_2302 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BCE_2302 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BCE_2303 PF02447 GntP family permease BCE_2304 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BCE_2304 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BCE_2305 PF10924 Protein of unknown function (DUF2711) BCE_2310 PF03358 NADPH-dependent FMN reductase BCE_2313 PF00005 ABC transporter BCE_2313 PF00571 CBS domain BCE_2314 PF00528 Binding-protein-dependent transport system inner membrane component BCE_2315 PF13520 Amino acid permease BCE_2323 PF00171 Aldehyde dehydrogenase family BCE_2324 PF07997 Protein of unknown function (DUF1694) BCE_2325 PF09385 Histidine kinase N terminal BCE_2328 PF00202 Aminotransferase class-III BCE_2329 PF01144 Coenzyme A transferase BCE_2330 PF01144 Coenzyme A transferase BCE_2331 PF01546 Peptidase family M20/M25/M40 BCE_2331 PF07687 Peptidase dimerisation domain BCE_2332 PF00583 Acetyltransferase (GNAT) family BCE_2333 PF13426 PAS domain BCE_2333 PF02954 Bacterial regulatory protein, Fis family BCE_2333 PF00158 Sigma-54 interaction domain BCE_2334 PF12544 Lysine-2,3-aminomutase BCE_2335 PF14122 YokU-like protein, putative antitoxin BCE_2336 PF06855 YozE SAM-like fold BCE_2340 PF08239 Bacterial SH3 domain BCE_2340 PF00069 Protein kinase domain BCE_2342 PF01569 PAP2 superfamily BCE_2343 PF16916 Dimerisation domain of Zinc Transporter BCE_2343 PF01545 Cation efflux family BCE_2344 PF00085 Thioredoxin BCE_2362 PF10676 Spore germination protein gerPA/gerPF BCE_2370 PF00905 Penicillin binding protein transpeptidase domain BCE_2370 PF00912 Transglycosylase BCE_2372 PF07690 Major Facilitator Superfamily BCE_2373 PF01521 Iron-sulphur cluster biosynthesis BCE_2376 PF00285 Citrate synthase, C-terminal domain BCE_2377 PF03972 MmgE/PrpD family BCE_2380 PF02770 Acyl-CoA dehydrogenase, middle domain BCE_2380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BCE_2380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BCE_2381 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BCE_2381 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BCE_2382 PF00171 Aldehyde dehydrogenase family BCE_2383 PF01810 LysE type translocator BCE_2384 PF00378 Enoyl-CoA hydratase/isomerase BCE_2388 PF10763 Protein of unknown function (DUF2584) BCE_2389 PF12320 Type 5 capsule protein repressor C-terminal domain BCE_2389 PF00149 Calcineurin-like phosphoesterase BCE_2390 PF12320 Type 5 capsule protein repressor C-terminal domain BCE_2390 PF00149 Calcineurin-like phosphoesterase BCE_2391 PF13476 AAA domain BCE_2393 PF01022 Bacterial regulatory protein, arsR family BCE_2396 PF07690 Major Facilitator Superfamily BCE_2398 PF00106 short chain dehydrogenase BCE_2399 PF00425 chorismate binding enzyme BCE_2400 PF00501 AMP-binding enzyme BCE_2400 PF13193 AMP-binding enzyme C-terminal domain BCE_2401 PF00857 Isochorismatase family BCE_2401 PF00550 Phosphopantetheine attachment site BCE_2402 PF00550 Phosphopantetheine attachment site BCE_2402 PF00501 AMP-binding enzyme BCE_2402 PF13193 AMP-binding enzyme C-terminal domain BCE_2402 PF00975 Thioesterase domain BCE_2402 PF00668 Condensation domain BCE_2403 PF03621 MbtH-like protein BCE_2404 PF07690 Major Facilitator Superfamily BCE_2407 PF00216 Bacterial DNA-binding protein BCE_2409 PF05163 DinB family BCE_2410 PF00082 Subtilase family BCE_2411 PF01235 Sodium:alanine symporter family BCE_2416 PF16291 Domain of unknown function (DUF4937 BCE_2417 PF00849 RNA pseudouridylate synthase BCE_2417 PF01479 S4 domain BCE_2419 PF02824 TGS domain BCE_2419 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BCE_2419 PF03129 Anticodon binding domain BCE_2419 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BCE_2420 PF00005 ABC transporter BCE_2422 PF12146 Serine aminopeptidase, S33 BCE_2423 PF07690 Major Facilitator Superfamily BCE_2426 PF00205 Thiamine pyrophosphate enzyme, central domain BCE_2426 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BCE_2426 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BCE_2428 PF13649 Methyltransferase domain BCE_2438 PF01047 MarR family BCE_2440 PF00753 Metallo-beta-lactamase superfamily BCE_2440 PF16123 Hydroxyacylglutathione hydrolase C-terminus BCE_2442 PF03176 MMPL family BCE_2444 PF00302 Chloramphenicol acetyltransferase BCE_2447 PF00583 Acetyltransferase (GNAT) family BCE_2452 PF13302 Acetyltransferase (GNAT) domain BCE_2454 PF00313 'Cold-shock' DNA-binding domain BCE_2462 PF01047 MarR family BCE_2463 PF07690 Major Facilitator Superfamily BCE_2464 PF03466 LysR substrate binding domain BCE_2464 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCE_2465 PF01118 Semialdehyde dehydrogenase, NAD binding domain BCE_2465 PF02774 Semialdehyde dehydrogenase, dimerisation domain BCE_2469 PF03466 LysR substrate binding domain BCE_2469 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCE_2471 PF03473 MOSC domain BCE_2471 PF03475 3-alpha domain BCE_2474 PF00664 ABC transporter transmembrane region BCE_2474 PF00005 ABC transporter BCE_2475 PF00005 ABC transporter BCE_2475 PF00664 ABC transporter transmembrane region BCE_2477 PF10676 Spore germination protein gerPA/gerPF BCE_2480 PF01810 LysE type translocator BCE_2481 PF07883 Cupin domain BCE_2481 PF01381 Helix-turn-helix BCE_2494 PF02638 Glycosyl hydrolase-like 10 BCE_2496 PF02378 Phosphotransferase system, EIIC BCE_2498 PF03702 Anhydro-N-acetylmuramic acid kinase BCE_2499 PF01869 BadF/BadG/BcrA/BcrD ATPase family BCE_2500 PF02660 Glycerol-3-phosphate acyltransferase BCE_2501 PF00266 Aminotransferase class-V BCE_2502 PF00291 Pyridoxal-phosphate dependent enzyme BCE_2503 PF01047 MarR family BCE_2504 PF07690 Major Facilitator Superfamily BCE_2509 PF00271 Helicase conserved C-terminal domain BCE_2509 PF00270 DEAD/DEAH box helicase BCE_2510 PF00440 Bacterial regulatory proteins, tetR family BCE_2510 PF17932 Tetracyclin repressor-like, C-terminal domain BCE_2513 PF12704 MacB-like periplasmic core domain BCE_2513 PF02687 FtsX-like permease family BCE_2513 PF00005 ABC transporter BCE_2514 PF09313 Domain of unknown function (DUF1971) BCE_2514 PF03848 Tellurite resistance protein TehB BCE_2516 PF08241 Methyltransferase domain BCE_2517 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BCE_2517 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BCE_2517 PF00205 Thiamine pyrophosphate enzyme, central domain BCE_2518 PF01047 MarR family BCE_2520 PF00300 Histidine phosphatase superfamily (branch 1) BCE_2522 PF14171 Toxin SpoIISA, type II toxin-antitoxin system BCE_2527 PF07687 Peptidase dimerisation domain BCE_2527 PF01546 Peptidase family M20/M25/M40 BCE_2529 PF07943 Penicillin-binding protein 5, C-terminal domain BCE_2529 PF00768 D-alanyl-D-alanine carboxypeptidase BCE_2533 PF00905 Penicillin binding protein transpeptidase domain BCE_2533 PF03717 Penicillin-binding Protein dimerisation domain BCE_2533 PF05223 NTF2-like N-terminal transpeptidase domain BCE_2534 PF04542 Sigma-70 region 2 BCE_2534 PF08281 Sigma-70, region 4 BCE_2536 PF00905 Penicillin binding protein transpeptidase domain BCE_2536 PF03717 Penicillin-binding Protein dimerisation domain BCE_2541 PF00149 Calcineurin-like phosphoesterase BCE_2543 PF00005 ABC transporter BCE_2545 PF00440 Bacterial regulatory proteins, tetR family BCE_2545 PF08359 YsiA-like protein, C-terminal region BCE_2548 PF02770 Acyl-CoA dehydrogenase, middle domain BCE_2548 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BCE_2548 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BCE_2549 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BCE_2549 PF02785 Biotin carboxylase C-terminal domain BCE_2549 PF00289 Biotin carboxylase, N-terminal domain BCE_2550 PF00364 Biotin-requiring enzyme BCE_2551 PF00682 HMGL-like BCE_2552 PF00378 Enoyl-CoA hydratase/isomerase BCE_2553 PF01039 Carboxyl transferase domain BCE_2554 PF00501 AMP-binding enzyme BCE_2554 PF16177 Acetyl-coenzyme A synthetase N-terminus BCE_2554 PF13193 AMP-binding enzyme C-terminal domain BCE_2558 PF00485 Phosphoribulokinase / Uridine kinase family BCE_2559 PF12146 Serine aminopeptidase, S33 BCE_2560 PF05163 DinB family BCE_2562 PF07943 Penicillin-binding protein 5, C-terminal domain BCE_2562 PF00768 D-alanyl-D-alanine carboxypeptidase BCE_2563 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_2563 PF00512 His Kinase A (phospho-acceptor) domain BCE_2564 PF00072 Response regulator receiver domain BCE_2564 PF00486 Transcriptional regulatory protein, C terminal BCE_2565 PF01966 HD domain BCE_2567 PF01048 Phosphorylase superfamily BCE_2568 PF13460 NAD(P)H-binding BCE_2571 PF07504 Fungalysin/Thermolysin Propeptide Motif BCE_2571 PF02868 Thermolysin metallopeptidase, alpha-helical domain BCE_2571 PF01447 Thermolysin metallopeptidase, catalytic domain BCE_2571 PF03413 Peptidase propeptide and YPEB domain BCE_2573 PF00144 Beta-lactamase BCE_2576 PF00005 ABC transporter BCE_2576 PF17755 UvrA DNA-binding domain BCE_2576 PF17760 UvrA interaction domain BCE_2579 PF00144 Beta-lactamase BCE_2582 PF07690 Major Facilitator Superfamily BCE_2585 PF13847 Methyltransferase domain BCE_2589 PF13732 Domain of unknown function (DUF4162) BCE_2589 PF00005 ABC transporter BCE_2592 PF12833 Helix-turn-helix domain BCE_2597 PF00392 Bacterial regulatory proteins, gntR family BCE_2597 PF00155 Aminotransferase class I and II BCE_2601 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal BCE_2601 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal BCE_2604 PF00107 Zinc-binding dehydrogenase BCE_2604 PF08240 Alcohol dehydrogenase GroES-like domain BCE_2607 PF04239 Protein of unknown function (DUF421) BCE_2609 PF08245 Mur ligase middle domain BCE_2609 PF01225 Mur ligase family, catalytic domain BCE_2609 PF02875 Mur ligase family, glutamate ligase domain BCE_2611 PF08450 SMP-30/Gluconolactonase/LRE-like region BCE_2614 PF07486 Cell Wall Hydrolase BCE_2616 PF03069 Acetamidase/Formamidase family BCE_2617 PF00486 Transcriptional regulatory protein, C terminal BCE_2617 PF00072 Response regulator receiver domain BCE_2618 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_2621 PF00005 ABC transporter BCE_2622 PF02687 FtsX-like permease family BCE_2626 PF00742 Homoserine dehydrogenase BCE_2626 PF03447 Homoserine dehydrogenase, NAD binding domain BCE_2626 PF01842 ACT domain BCE_2627 PF00392 Bacterial regulatory proteins, gntR family BCE_2627 PF00155 Aminotransferase class I and II BCE_2628 PF01820 D-ala D-ala ligase N-terminus BCE_2628 PF07478 D-ala D-ala ligase C-terminus BCE_2629 PF03070 TENA/THI-4/PQQC family BCE_2636 PF01609 Transposase DDE domain BCE_2637 PF01609 Transposase DDE domain BCE_2638 PF01048 Phosphorylase superfamily BCE_2640 PF10676 Spore germination protein gerPA/gerPF BCE_2654 PF00067 Cytochrome P450 BCE_2656 PF00132 Bacterial transferase hexapeptide (six repeats) BCE_2657 PF07561 Domain of Unknown Function (DUF1540) BCE_2659 PF00067 Cytochrome P450 BCE_2662 PF13426 PAS domain BCE_2662 PF13188 PAS domain BCE_2662 PF00512 His Kinase A (phospho-acceptor) domain BCE_2662 PF00989 PAS fold BCE_2662 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_2664 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BCE_2665 PF01177 Asp/Glu/Hydantoin racemase BCE_2667 PF07155 ECF-type riboflavin transporter, S component BCE_2668 PF00005 ABC transporter BCE_2668 PF12558 ATP-binding cassette cobalt transporter BCE_2670 PF09680 Family of unknown function BCE_2671 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_2671 PF00512 His Kinase A (phospho-acceptor) domain BCE_2673 PF04229 GrpB protein BCE_2675 PF00072 Response regulator receiver domain BCE_2675 PF00486 Transcriptional regulatory protein, C terminal BCE_2676 PF18719 ArlS sensor domain BCE_2676 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_2676 PF00512 His Kinase A (phospho-acceptor) domain BCE_2677 PF00107 Zinc-binding dehydrogenase BCE_2677 PF08240 Alcohol dehydrogenase GroES-like domain BCE_2678 PF01569 PAP2 superfamily BCE_2680 PF08361 MAATS-type transcriptional repressor, C-terminal region BCE_2680 PF00440 Bacterial regulatory proteins, tetR family BCE_2690 PF01965 DJ-1/PfpI family BCE_2691 PF00282 Pyridoxal-dependent decarboxylase conserved domain BCE_2694 PF12697 Alpha/beta hydrolase family BCE_2695 PF01609 Transposase DDE domain BCE_2696 PF00067 Cytochrome P450 BCE_2699 PF07690 Major Facilitator Superfamily BCE_2703 PF03009 Glycerophosphoryl diester phosphodiesterase family BCE_2708 PF00155 Aminotransferase class I and II BCE_2708 PF00392 Bacterial regulatory proteins, gntR family BCE_2709 PF00892 EamA-like transporter family BCE_2710 PF01270 Glycosyl hydrolases family 8 BCE_2714 PF00293 NUDIX domain BCE_2718 PF07690 Major Facilitator Superfamily BCE_2719 PF00293 NUDIX domain BCE_2719 PF09297 NADH pyrophosphatase zinc ribbon domain BCE_2720 PF00712 DNA polymerase III beta subunit, N-terminal domain BCE_2720 PF02768 DNA polymerase III beta subunit, C-terminal domain BCE_2720 PF02767 DNA polymerase III beta subunit, central domain BCE_2721 PF00293 NUDIX domain BCE_2724 PF12706 Beta-lactamase superfamily domain BCE_2727 PF09234 Domain of unknown function (DUF1963) BCE_2729 PF12867 DinB superfamily BCE_2732 PF02673 Bacitracin resistance protein BacA BCE_2734 PF01541 GIY-YIG catalytic domain BCE_2742 PF01266 FAD dependent oxidoreductase BCE_2744 PF00797 N-acetyltransferase BCE_2747 PF13419 Haloacid dehalogenase-like hydrolase BCE_2749 PF00486 Transcriptional regulatory protein, C terminal BCE_2749 PF00072 Response regulator receiver domain BCE_2750 PF11808 Phosphate regulon sensor protein PhoR BCE_2750 PF00512 His Kinase A (phospho-acceptor) domain BCE_2750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_2750 PF00989 PAS fold BCE_2752 PF05504 Spore germination B3/ GerAC like, C-terminal BCE_2753 PF03323 Bacillus/Clostridium GerA spore germination protein BCE_2754 PF03845 Spore germination protein BCE_2757 PF00005 ABC transporter BCE_2758 PF02687 FtsX-like permease family BCE_2758 PF12704 MacB-like periplasmic core domain BCE_2759 PF01569 PAP2 superfamily BCE_2761 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BCE_2761 PF03714 Bacterial pullanase-associated domain BCE_2761 PF00128 Alpha amylase, catalytic domain BCE_2762 PF07504 Fungalysin/Thermolysin Propeptide Motif BCE_2762 PF02868 Thermolysin metallopeptidase, alpha-helical domain BCE_2762 PF01447 Thermolysin metallopeptidase, catalytic domain BCE_2762 PF03413 Peptidase propeptide and YPEB domain BCE_2765 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCE_2766 PF00344 SecY translocase BCE_2767 PF00308 Bacterial dnaA protein BCE_2767 PF08299 Bacterial dnaA protein helix-turn-helix BCE_2767 PF11638 DnaA N-terminal domain BCE_2768 PF00892 EamA-like transporter family BCE_2769 PF00392 Bacterial regulatory proteins, gntR family BCE_2769 PF00155 Aminotransferase class I and II BCE_2770 PF08240 Alcohol dehydrogenase GroES-like domain BCE_2770 PF00107 Zinc-binding dehydrogenase BCE_2771 PF00561 alpha/beta hydrolase fold BCE_2776 PF06081 Aromatic acid exporter family member 1 BCE_2779 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BCE_2780 PF14620 YpeB sporulation BCE_2780 PF03413 Peptidase propeptide and YPEB domain BCE_2781 PF07486 Cell Wall Hydrolase BCE_2781 PF01471 Putative peptidoglycan binding domain BCE_2785 PF03301 Tryptophan 2,3-dioxygenase BCE_2786 PF04199 Putative cyclase BCE_2787 PF00266 Aminotransferase class-V BCE_2789 PF13344 Haloacid dehalogenase-like hydrolase BCE_2789 PF00293 NUDIX domain BCE_2794 PF02954 Bacterial regulatory protein, Fis family BCE_2794 PF01590 GAF domain BCE_2794 PF00158 Sigma-54 interaction domain BCE_2797 PF13302 Acetyltransferase (GNAT) domain BCE_2798 PF00455 DeoR C terminal sensor domain BCE_2798 PF08220 DeoR-like helix-turn-helix domain BCE_2801 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BCE_2801 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCE_2802 PF02817 e3 binding domain BCE_2802 PF00364 Biotin-requiring enzyme BCE_2802 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BCE_2803 PF02779 Transketolase, pyrimidine binding domain BCE_2803 PF02780 Transketolase, C-terminal domain BCE_2804 PF00676 Dehydrogenase E1 component BCE_2806 PF00106 short chain dehydrogenase BCE_2807 PF04229 GrpB protein BCE_2807 PF13673 Acetyltransferase (GNAT) domain BCE_2810 PF00293 NUDIX domain BCE_2810 PF09297 NADH pyrophosphatase zinc ribbon domain BCE_2815 PF00528 Binding-protein-dependent transport system inner membrane component BCE_2816 PF00005 ABC transporter BCE_2816 PF00571 CBS domain BCE_2818 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BCE_2819 PF00574 Clp protease BCE_2822 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BCE_2823 PF13673 Acetyltransferase (GNAT) domain BCE_2824 PF18416 N-acetylglucosamine binding protein domain 2 BCE_2824 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading BCE_2825 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BCE_2826 PF03781 Sulfatase-modifying factor enzyme 1 BCE_2829 PF10990 Protein of unknown function (DUF2809) BCE_2830 PF08241 Methyltransferase domain BCE_2831 PF04237 YjbR BCE_2839 PF13538 UvrD-like helicase C-terminal domain BCE_2842 PF00270 DEAD/DEAH box helicase BCE_2842 PF00271 Helicase conserved C-terminal domain BCE_2842 PF09382 RQC domain BCE_2842 PF00570 HRDC domain BCE_2842 PF16124 RecQ zinc-binding BCE_2848 PF12123 N-acetylmuramoyl-l-alanine amidase BCE_2848 PF01510 N-acetylmuramoyl-L-alanine amidase BCE_2854 PF01368 DHH family BCE_2854 PF02833 DHHA2 domain BCE_2855 PF18416 N-acetylglucosamine binding protein domain 2 BCE_2855 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading BCE_2857 PF03193 RsgA GTPase BCE_2858 PF02627 Carboxymuconolactone decarboxylase family BCE_2859 PF01235 Sodium:alanine symporter family BCE_2860 PF00171 Aldehyde dehydrogenase family BCE_2861 PF00701 Dihydrodipicolinate synthetase family BCE_2862 PF05544 Proline racemase BCE_2863 PF05544 Proline racemase BCE_2864 PF01266 FAD dependent oxidoreductase BCE_2865 PF02954 Bacterial regulatory protein, Fis family BCE_2865 PF00158 Sigma-54 interaction domain BCE_2865 PF13188 PAS domain BCE_2866 PF04324 BFD-like [2Fe-2S] binding domain BCE_2866 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCE_2871 PF08876 Domain of unknown function (DUF1836) BCE_2872 PF09335 SNARE associated Golgi protein BCE_2875 PF04914 DltD protein BCE_2876 PF13302 Acetyltransferase (GNAT) domain BCE_2876 PF03352 Methyladenine glycosylase BCE_2876 PF00117 Glutamine amidotransferase class-I BCE_2876 PF00958 GMP synthase C terminal domain BCE_2876 PF13673 Acetyltransferase (GNAT) domain BCE_2877 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCE_2878 PF00877 NlpC/P60 family BCE_2878 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain BCE_2879 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BCE_2879 PF13378 Enolase C-terminal domain-like BCE_2883 PF01965 DJ-1/PfpI family BCE_2885 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BCE_2891 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BCE_2891 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BCE_2892 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_2892 PF16736 Single Cache-like BCE_2892 PF00989 PAS fold BCE_2892 PF00512 His Kinase A (phospho-acceptor) domain BCE_2893 PF00072 Response regulator receiver domain BCE_2893 PF00486 Transcriptional regulatory protein, C terminal BCE_2897 PF01048 Phosphorylase superfamily BCE_2900 PF03808 Glycosyl transferase WecB/TagA/CpsF family BCE_2902 PF01432 Peptidase family M3 BCE_2902 PF08439 Oligopeptidase F BCE_2904 PF13520 Amino acid permease BCE_2905 PF01037 Lrp/AsnC ligand binding domain BCE_2906 PF02645 Uncharacterised protein, DegV family COG1307 BCE_2907 PF07552 Spore Coat Protein X and V domain BCE_2916 PF07690 Major Facilitator Superfamily BCE_2918 PF04519 Polymer-forming cytoskeletal BCE_2919 PF13171 Protein of unknown function (DUF4004) BCE_2920 PF12793 Sugar transport-related sRNA regulator N-term BCE_2920 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCE_2921 PF07690 Major Facilitator Superfamily BCE_2926 PF04226 Transglycosylase associated protein BCE_2927 PF01156 Inosine-uridine preferring nucleoside hydrolase BCE_2929 PF08241 Methyltransferase domain BCE_2938 PF00155 Aminotransferase class I and II BCE_2939 PF07977 FabA-like domain BCE_2940 PF03630 Fumble BCE_2944 PF00005 ABC transporter BCE_2955 PF01594 AI-2E family transporter BCE_2958 PF00296 Luciferase-like monooxygenase BCE_2959 PF00528 Binding-protein-dependent transport system inner membrane component BCE_2960 PF09084 NMT1/THI5 like BCE_2961 PF00005 ABC transporter BCE_2965 PF00293 NUDIX domain BCE_2965 PF13344 Haloacid dehalogenase-like hydrolase BCE_2969 PF02522 Aminoglycoside 3-N-acetyltransferase BCE_2973 PF13536 Putative multidrug resistance efflux transporter BCE_2978 PF08713 DNA alkylation repair enzyme BCE_2979 PF01522 Polysaccharide deacetylase BCE_2981 PF03611 PTS system sugar-specific permease component BCE_2983 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BCE_2986 PF03741 Integral membrane protein TerC family BCE_2987 PF00884 Sulfatase BCE_2988 PF12848 ABC transporter BCE_2988 PF00005 ABC transporter BCE_2990 PF03176 MMPL family BCE_2991 PF00440 Bacterial regulatory proteins, tetR family BCE_2991 PF16295 Tetracyclin repressor-like, C-terminal domain BCE_2994 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BCE_2995 PF02153 Prephenate dehydrogenase BCE_2995 PF01842 ACT domain BCE_2996 PF00155 Aminotransferase class I and II BCE_2997 PF01264 Chorismate synthase BCE_2998 PF01817 Chorismate mutase type II BCE_2998 PF00793 DAHP synthetase I family BCE_3002 PF01636 Phosphotransferase enzyme family BCE_3005 PF01476 LysM domain BCE_3005 PF06725 3D domain BCE_3011 PF06039 Malate:quinone oxidoreductase (Mqo) BCE_3012 PF13407 Periplasmic binding protein domain BCE_3013 PF02653 Branched-chain amino acid transport system / permease component BCE_3014 PF02653 Branched-chain amino acid transport system / permease component BCE_3015 PF00005 ABC transporter BCE_3016 PF00325 Bacterial regulatory proteins, crp family BCE_3016 PF04198 Putative sugar-binding domain BCE_3017 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BCE_3017 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BCE_3019 PF01791 DeoC/LacD family aldolase BCE_3020 PF13302 Acetyltransferase (GNAT) domain BCE_3024 PF03992 Antibiotic biosynthesis monooxygenase BCE_3027 PF07662 Na+ dependent nucleoside transporter C-terminus BCE_3027 PF01773 Na+ dependent nucleoside transporter N-terminus BCE_3028 PF00171 Aldehyde dehydrogenase family BCE_3029 PF00696 Amino acid kinase family BCE_3029 PF01472 PUA domain BCE_3031 PF14748 Pyrroline-5-carboxylate reductase dimerisation BCE_3031 PF03807 NADP oxidoreductase coenzyme F420-dependent BCE_3032 PF01546 Peptidase family M20/M25/M40 BCE_3033 PF01614 Bacterial transcriptional regulator BCE_3033 PF09339 IclR helix-turn-helix domain BCE_3034 PF00324 Amino acid permease BCE_3035 PF01139 tRNA-splicing ligase RtcB BCE_3036 PF00487 Fatty acid desaturase BCE_3037 PF05547 Immune inhibitor A peptidase M6 BCE_3038 PF00245 Alkaline phosphatase BCE_3039 PF11188 Protein of unknown function (DUF2975) BCE_3040 PF13443 Cro/C1-type HTH DNA-binding domain BCE_3042 PF10086 YhfC intramembrane metalloprotease BCE_3044 PF04397 LytTr DNA-binding domain BCE_3044 PF00072 Response regulator receiver domain BCE_3046 PF13302 Acetyltransferase (GNAT) domain BCE_3047 PF12681 Glyoxalase-like domain BCE_3053 PF17863 AAA lid domain BCE_3053 PF07726 ATPase family associated with various cellular activities (AAA) BCE_3056 PF07690 Major Facilitator Superfamily BCE_3057 PF00202 Aminotransferase class-III BCE_3059 PF06628 Catalase-related immune-responsive BCE_3059 PF00199 Catalase BCE_3060 PF00528 Binding-protein-dependent transport system inner membrane component BCE_3061 PF00005 ABC transporter BCE_3064 PF01047 MarR family BCE_3066 PF01810 LysE type translocator BCE_3069 PF00144 Beta-lactamase BCE_3073 PF07726 ATPase family associated with various cellular activities (AAA) BCE_3073 PF17863 AAA lid domain BCE_3075 PF00881 Nitroreductase family BCE_3076 PF01047 MarR family BCE_3077 PF00679 Elongation factor G C-terminus BCE_3077 PF14492 Elongation Factor G, domain II BCE_3077 PF03764 Elongation factor G, domain IV BCE_3077 PF00009 Elongation factor Tu GTP binding domain BCE_3078 PF13176 Tetratricopeptide repeat BCE_3078 PF18801 response regulator aspartate phosphatase H, N terminal BCE_3081 PF00293 NUDIX domain BCE_3083 PF00005 ABC transporter BCE_3088 PF12833 Helix-turn-helix domain BCE_3089 PF00583 Acetyltransferase (GNAT) family BCE_3092 PF00892 EamA-like transporter family BCE_3093 PF00392 Bacterial regulatory proteins, gntR family BCE_3093 PF00155 Aminotransferase class I and II BCE_3095 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BCE_3096 PF13031 Protein of unknown function (DUF3892) BCE_3102 PF01925 Sulfite exporter TauE/SafE BCE_3104 PF00324 Amino acid permease BCE_3106 PF06445 GyrI-like small molecule binding domain BCE_3106 PF13411 MerR HTH family regulatory protein BCE_3108 PF02567 Phenazine biosynthesis-like protein BCE_3110 PF00293 NUDIX domain BCE_3112 PF10502 Signal peptidase, peptidase S26 BCE_3115 PF02146 Sir2 family BCE_3116 PF01470 Pyroglutamyl peptidase BCE_3119 PF03746 LamB/YcsF family BCE_3120 PF02626 Carboxyltransferase domain, subdomain A and B BCE_3121 PF02682 Carboxyltransferase domain, subdomain C and D BCE_3122 PF09339 IclR helix-turn-helix domain BCE_3122 PF01614 Bacterial transcriptional regulator BCE_3123 PF10502 Signal peptidase, peptidase S26 BCE_3124 PF03932 CutC family BCE_3125 PF07454 Stage II sporulation protein P (SpoIIP) BCE_3126 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BCE_3126 PF02770 Acyl-CoA dehydrogenase, middle domain BCE_3126 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BCE_3134 PF02915 Rubrerythrin BCE_3136 PF00440 Bacterial regulatory proteins, tetR family BCE_3137 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BCE_3137 PF00391 PEP-utilising enzyme, mobile domain BCE_3139 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BCE_3140 PF00753 Metallo-beta-lactamase superfamily BCE_3142 PF10710 Protein of unknown function (DUF2512) BCE_3143 PF11553 Protein of unknown function (DUF3231) BCE_3144 PF00269 Small, acid-soluble spore proteins, alpha/beta type BCE_3145 PF13823 Alcohol dehydrogenase GroES-associated BCE_3145 PF00107 Zinc-binding dehydrogenase BCE_3145 PF08240 Alcohol dehydrogenase GroES-like domain BCE_3147 PF00589 Phage integrase family BCE_3147 PF02899 Phage integrase, N-terminal SAM-like domain BCE_3148 PF02899 Phage integrase, N-terminal SAM-like domain BCE_3148 PF00589 Phage integrase family BCE_3154 PF11798 IMS family HHH motif BCE_3154 PF00817 impB/mucB/samB family BCE_3154 PF11799 impB/mucB/samB family C-terminal domain BCE_3157 PF17936 Bacterial Ig domain BCE_3157 PF00149 Calcineurin-like phosphoesterase BCE_3157 PF02872 5'-nucleotidase, C-terminal domain BCE_3158 PF00561 alpha/beta hydrolase fold BCE_3160 PF00857 Isochorismatase family BCE_3164 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCE_3164 PF03466 LysR substrate binding domain BCE_3166 PF01544 CorA-like Mg2+ transporter protein BCE_3175 PF11954 Domain of unknown function (DUF3471) BCE_3175 PF00144 Beta-lactamase BCE_3178 PF00512 His Kinase A (phospho-acceptor) domain BCE_3178 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_3178 PF00672 HAMP domain BCE_3179 PF00072 Response regulator receiver domain BCE_3179 PF00486 Transcriptional regulatory protein, C terminal BCE_3180 PF13529 Peptidase_C39 like family BCE_3183 PF03073 TspO/MBR family BCE_3184 PF03441 FAD binding domain of DNA photolyase BCE_3184 PF00875 DNA photolyase BCE_3186 PF07690 Major Facilitator Superfamily BCE_3188 PF07859 alpha/beta hydrolase fold BCE_3190 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) BCE_3191 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BCE_3191 PF00361 Proton-conducting membrane transporter BCE_3193 PF10057 Uncharacterized conserved protein (DUF2294) BCE_3194 PF07690 Major Facilitator Superfamily BCE_3196 PF01522 Polysaccharide deacetylase BCE_3198 PF01040 UbiA prenyltransferase family BCE_3199 PF12323 Helix-turn-helix domain BCE_3199 PF01385 Probable transposase BCE_3199 PF07282 Putative transposase DNA-binding domain BCE_3201 PF12697 Alpha/beta hydrolase family BCE_3202 PF12996 DUF based on E. rectale Gene description (DUF3880) BCE_3205 PF12746 GNAT acetyltransferase BCE_3207 PF01451 Low molecular weight phosphotyrosine protein phosphatase BCE_3208 PF01758 Sodium Bile acid symporter family BCE_3209 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCE_3210 PF01022 Bacterial regulatory protein, arsR family BCE_3214 PF01872 RibD C-terminal domain BCE_3219 PF00005 ABC transporter BCE_3227 PF07993 Male sterility protein BCE_3227 PF00550 Phosphopantetheine attachment site BCE_3228 PF18665 Tetracyclin repressor-like, C-terminal domain BCE_3228 PF00440 Bacterial regulatory proteins, tetR family BCE_3232 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCE_3239 PF00258 Flavodoxin BCE_3239 PF00667 FAD binding domain BCE_3239 PF00175 Oxidoreductase NAD-binding domain BCE_3239 PF00067 Cytochrome P450 BCE_3240 PF07690 Major Facilitator Superfamily BCE_3242 PF09962 Uncharacterized conserved protein (DUF2196) BCE_3248 PF00107 Zinc-binding dehydrogenase BCE_3248 PF08240 Alcohol dehydrogenase GroES-like domain BCE_3250 PF00067 Cytochrome P450 BCE_3251 PF00067 Cytochrome P450 BCE_3252 PF00067 Cytochrome P450 BCE_3254 PF07859 alpha/beta hydrolase fold BCE_3261 PF00291 Pyridoxal-phosphate dependent enzyme BCE_3264 PF04072 Leucine carboxyl methyltransferase BCE_3267 PF00005 ABC transporter BCE_3268 PF02687 FtsX-like permease family BCE_3271 PF00512 His Kinase A (phospho-acceptor) domain BCE_3271 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_3271 PF00672 HAMP domain BCE_3272 PF00072 Response regulator receiver domain BCE_3272 PF00486 Transcriptional regulatory protein, C terminal BCE_3274 PF01047 MarR family BCE_3275 PF00583 Acetyltransferase (GNAT) family BCE_3276 PF04299 Putative FMN-binding domain BCE_3277 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BCE_3277 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BCE_3281 PF17676 LD-carboxypeptidase C-terminal domain BCE_3281 PF02016 LD-carboxypeptidase N-terminal domain BCE_3284 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BCE_3284 PF01842 ACT domain BCE_3284 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BCE_3285 PF00266 Aminotransferase class-V BCE_3291 PF00196 Bacterial regulatory proteins, luxR family BCE_3291 PF00072 Response regulator receiver domain BCE_3292 PF01804 Penicillin amidase BCE_3295 PF01471 Putative peptidoglycan binding domain BCE_3295 PF01476 LysM domain BCE_3295 PF01510 N-acetylmuramoyl-L-alanine amidase BCE_3304 PF14044 NETI protein BCE_3305 PF07690 Major Facilitator Superfamily BCE_3307 PF12697 Alpha/beta hydrolase family BCE_3308 PF01047 MarR family BCE_3309 PF07690 Major Facilitator Superfamily BCE_3311 PF17314 Family of unknown function (DUF5360) BCE_3312 PF00893 Small Multidrug Resistance protein BCE_3313 PF00440 Bacterial regulatory proteins, tetR family BCE_3314 PF01289 Thiol-activated cytolysin BCE_3314 PF17440 Thiol-activated cytolysin beta sandwich domain BCE_3315 PF02667 Short chain fatty acid transporter BCE_3317 PF02525 Flavodoxin-like fold BCE_3323 PF00005 ABC transporter BCE_3324 PF02361 Cobalt transport protein BCE_3327 PF03737 Aldolase/RraA BCE_3328 PF03606 C4-dicarboxylate anaerobic carrier BCE_3330 PF01609 Transposase DDE domain BCE_3336 PF13610 DDE domain BCE_3339 PF01609 Transposase DDE domain BCE_3345 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BCE_3347 PF04073 Aminoacyl-tRNA editing domain BCE_3348 PF03129 Anticodon binding domain BCE_3348 PF13393 Histidyl-tRNA synthetase BCE_3352 PF00391 PEP-utilising enzyme, mobile domain BCE_3352 PF02887 Pyruvate kinase, alpha/beta domain BCE_3352 PF00224 Pyruvate kinase, barrel domain BCE_3357 PF00005 ABC transporter BCE_3362 PF13419 Haloacid dehalogenase-like hydrolase BCE_3370 PF13344 Haloacid dehalogenase-like hydrolase BCE_3370 PF00293 NUDIX domain BCE_3372 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCE_3373 PF00480 ROK family BCE_3375 PF12464 Maltose acetyltransferase BCE_3375 PF14602 Hexapeptide repeat of succinyl-transferase BCE_3376 PF00579 tRNA synthetases class I (W and Y) BCE_3380 PF01594 AI-2E family transporter BCE_3384 PF18389 TrmO C-terminal domain BCE_3384 PF01980 tRNA-methyltransferase O BCE_3385 PF08241 Methyltransferase domain BCE_3387 PF07690 Major Facilitator Superfamily BCE_3390 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BCE_3392 PF03471 Transporter associated domain BCE_3392 PF01595 Cyclin M transmembrane N-terminal domain BCE_3392 PF00571 CBS domain BCE_3393 PF13411 MerR HTH family regulatory protein BCE_3395 PF00483 Nucleotidyl transferase BCE_3396 PF16363 GDP-mannose 4,6 dehydratase BCE_3397 PF08421 Putative zinc binding domain BCE_3397 PF08484 C-methyltransferase C-terminal domain BCE_3398 PF01370 NAD dependent epimerase/dehydratase family BCE_3401 PF00892 EamA-like transporter family BCE_3405 PF06906 Protein of unknown function (DUF1272) BCE_3406 PF10282 Lactonase, 7-bladed beta-propeller BCE_3407 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BCE_3407 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BCE_3408 PF02447 GntP family permease BCE_3409 PF00923 Transaldolase/Fructose-6-phosphate aldolase BCE_3410 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BCE_3410 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BCE_3411 PF02780 Transketolase, C-terminal domain BCE_3411 PF00456 Transketolase, thiamine diphosphate binding domain BCE_3411 PF02779 Transketolase, pyrimidine binding domain BCE_3412 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BCE_3412 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BCE_3413 PF03928 Haem-degrading BCE_3423 PF03960 ArsC family BCE_3424 PF07702 UTRA domain BCE_3424 PF00392 Bacterial regulatory proteins, gntR family BCE_3425 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BCE_3425 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BCE_3431 PF02567 Phenazine biosynthesis-like protein BCE_3435 PF13302 Acetyltransferase (GNAT) domain BCE_3436 PF00501 AMP-binding enzyme BCE_3436 PF13193 AMP-binding enzyme C-terminal domain BCE_3437 PF02525 Flavodoxin-like fold BCE_3438 PF01638 HxlR-like helix-turn-helix BCE_3439 PF01022 Bacterial regulatory protein, arsR family BCE_3440 PF12791 Anti-sigma factor N-terminus BCE_3441 PF04542 Sigma-70 region 2 BCE_3442 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 BCE_3442 PF00535 Glycosyl transferase family 2 BCE_3445 PF00293 NUDIX domain BCE_3446 PF01061 ABC-2 type transporter BCE_3447 PF13732 Domain of unknown function (DUF4162) BCE_3447 PF00005 ABC transporter BCE_3450 PF03063 Prismane/CO dehydrogenase family BCE_3452 PF00753 Metallo-beta-lactamase superfamily BCE_3454 PF12650 Domain of unknown function (DUF3784) BCE_3457 PF00144 Beta-lactamase BCE_3466 PF00753 Metallo-beta-lactamase superfamily BCE_3469 PF03551 Transcriptional regulator PadR-like family BCE_3470 PF00107 Zinc-binding dehydrogenase BCE_3470 PF08240 Alcohol dehydrogenase GroES-like domain BCE_3471 PF00324 Amino acid permease BCE_3476 PF12323 Helix-turn-helix domain BCE_3476 PF07282 Putative transposase DNA-binding domain BCE_3476 PF01385 Probable transposase BCE_3477 PF07690 Major Facilitator Superfamily BCE_3479 PF02585 GlcNAc-PI de-N-acetylase BCE_3480 PF08830 Protein of unknown function (DUF1806) BCE_3482 PF03600 Citrate transporter BCE_3485 PF01497 Periplasmic binding protein BCE_3486 PF01032 FecCD transport family BCE_3487 PF01032 FecCD transport family BCE_3488 PF05675 Protein of unknown function (DUF817) BCE_3493 PF10901 Protein of unknown function (DUF2690) BCE_3495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCE_3495 PF03466 LysR substrate binding domain BCE_3496 PF08240 Alcohol dehydrogenase GroES-like domain BCE_3496 PF00107 Zinc-binding dehydrogenase BCE_3499 PF00488 MutS domain V BCE_3499 PF01713 Smr domain BCE_3501 PF00797 N-acetyltransferase BCE_3502 PF01432 Peptidase family M3 BCE_3502 PF08439 Oligopeptidase F BCE_3505 PF04371 Porphyromonas-type peptidyl-arginine deiminase BCE_3507 PF00144 Beta-lactamase BCE_3510 PF07690 Major Facilitator Superfamily BCE_3511 PF03466 LysR substrate binding domain BCE_3511 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCE_3514 PF03009 Glycerophosphoryl diester phosphodiesterase family BCE_3516 PF13538 UvrD-like helicase C-terminal domain BCE_3518 PF01494 FAD binding domain BCE_3520 PF01022 Bacterial regulatory protein, arsR family BCE_3521 PF08240 Alcohol dehydrogenase GroES-like domain BCE_3521 PF00107 Zinc-binding dehydrogenase BCE_3522 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BCE_3523 PF18801 response regulator aspartate phosphatase H, N terminal BCE_3527 PF04229 GrpB protein BCE_3529 PF01758 Sodium Bile acid symporter family BCE_3530 PF01565 FAD binding domain BCE_3530 PF02913 FAD linked oxidases, C-terminal domain BCE_3533 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BCE_3539 PF18496 Collagenase G catalytic helper subdomain BCE_3539 PF01752 Collagenase BCE_3539 PF08453 Peptidase family M9 N-terminal BCE_3541 PF02308 MgtC family BCE_3544 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCE_3545 PF00497 Bacterial extracellular solute-binding proteins, family 3 BCE_3546 PF00005 ABC transporter BCE_3547 PF00528 Binding-protein-dependent transport system inner membrane component BCE_3548 PF04294 VanW like protein BCE_3550 PF13037 Domain of unknown function (DUF3898) BCE_3550 PF13039 Protein of unknown function (DUF3900) BCE_3553 PF00313 'Cold-shock' DNA-binding domain BCE_3555 PF00258 Flavodoxin BCE_3557 PF00293 NUDIX domain BCE_3559 PF00132 Bacterial transferase hexapeptide (six repeats) BCE_3561 PF00106 short chain dehydrogenase BCE_3564 PF00206 Lyase BCE_3564 PF14698 Argininosuccinate lyase C-terminal BCE_3566 PF01156 Inosine-uridine preferring nucleoside hydrolase BCE_3567 PF00474 Sodium:solute symporter family BCE_3569 PF00171 Aldehyde dehydrogenase family BCE_3571 PF14151 YfhD-like protein BCE_3572 PF13243 Squalene-hopene cyclase C-terminal domain BCE_3572 PF13249 Squalene-hopene cyclase N-terminal domain BCE_3573 PF02681 Divergent PAP2 family BCE_3574 PF00892 EamA-like transporter family BCE_3575 PF06961 Protein of unknown function (DUF1294) BCE_3578 PF10609 NUBPL iron-transfer P-loop NTPase BCE_3580 PF02391 MoaE protein BCE_3581 PF03453 MoeA N-terminal region (domain I and II) BCE_3581 PF00994 Probable molybdopterin binding domain BCE_3581 PF03454 MoeA C-terminal region (domain IV) BCE_3582 PF00899 ThiF family BCE_3583 PF01226 Formate/nitrite transporter BCE_3584 PF04055 Radical SAM superfamily BCE_3584 PF06463 Molybdenum Cofactor Synthesis C BCE_3585 PF02634 FdhD/NarQ family BCE_3586 PF10057 Uncharacterized conserved protein (DUF2294) BCE_3587 PF07849 Protein of unknown function (DUF1641) BCE_3588 PF01568 Molydopterin dinucleotide binding domain BCE_3588 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BCE_3588 PF00037 4Fe-4S binding domain BCE_3588 PF00384 Molybdopterin oxidoreductase BCE_3588 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BCE_3589 PF03323 Bacillus/Clostridium GerA spore germination protein BCE_3590 PF03323 Bacillus/Clostridium GerA spore germination protein BCE_3600 PF08241 Methyltransferase domain BCE_3601 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCE_3602 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCE_3603 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCE_3604 PF00375 Sodium:dicarboxylate symporter family BCE_3605 PF03816 Cell envelope-related transcriptional attenuator domain BCE_3607 PF04542 Sigma-70 region 2 BCE_3607 PF08281 Sigma-70, region 4 BCE_3610 PF13732 Domain of unknown function (DUF4162) BCE_3610 PF00005 ABC transporter BCE_3615 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BCE_3615 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BCE_3616 PF03989 DNA gyrase C-terminal domain, beta-propeller BCE_3616 PF00521 DNA gyrase/topoisomerase IV, subunit A BCE_3617 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_3617 PF00204 DNA gyrase B BCE_3617 PF01751 Toprim domain BCE_3617 PF00986 DNA gyrase B subunit, carboxyl terminus BCE_3618 PF13380 CoA binding domain BCE_3619 PF13180 PDZ domain BCE_3620 PF00486 Transcriptional regulatory protein, C terminal BCE_3620 PF00072 Response regulator receiver domain BCE_3622 PF03477 ATP cone domain BCE_3622 PF13597 Anaerobic ribonucleoside-triphosphate reductase BCE_3624 PF02660 Glycerol-3-phosphate acyltransferase BCE_3625 PF01521 Iron-sulphur cluster biosynthesis BCE_3626 PF03061 Thioesterase superfamily BCE_3627 PF01476 LysM domain BCE_3627 PF00704 Glycosyl hydrolases family 18 BCE_3629 PF08177 Small acid-soluble spore protein N family BCE_3630 PF13040 Fur-regulated basic protein B BCE_3631 PF00929 Exonuclease BCE_3631 PF02811 PHP domain BCE_3631 PF11490 DNA polymerase III polC-type N-terminus II BCE_3631 PF14579 Helix-hairpin-helix motif BCE_3631 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BCE_3631 PF07733 Bacterial DNA polymerase III alpha NTPase domain BCE_3631 PF01336 OB-fold nucleic acid binding domain BCE_3632 PF00578 AhpC/TSA family BCE_3634 PF03412 Peptidase C39 family BCE_3634 PF00005 ABC transporter BCE_3634 PF00664 ABC transporter transmembrane region BCE_3635 PF00694 Aconitase C-terminal domain BCE_3635 PF00330 Aconitase family (aconitate hydratase) BCE_3637 PF01522 Polysaccharide deacetylase BCE_3639 PF08179 Small acid-soluble spore protein P family BCE_3641 PF07690 Major Facilitator Superfamily BCE_3643 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BCE_3643 PF01411 tRNA synthetases class II (A) BCE_3643 PF02272 DHHA1 domain BCE_3644 PF13344 Haloacid dehalogenase-like hydrolase BCE_3644 PF00293 NUDIX domain BCE_3646 PF00108 Thiolase, N-terminal domain BCE_3646 PF02803 Thiolase, C-terminal domain BCE_3647 PF13193 AMP-binding enzyme C-terminal domain BCE_3647 PF00501 AMP-binding enzyme BCE_3648 PF02632 BioY family BCE_3649 PF13193 AMP-binding enzyme C-terminal domain BCE_3649 PF00501 AMP-binding enzyme BCE_3651 PF00005 ABC transporter BCE_3652 PF01381 Helix-turn-helix BCE_3655 PF05532 CsbD-like BCE_3656 PF03824 High-affinity nickel-transport protein BCE_3657 PF02293 AmiS/UreI family transporter BCE_3658 PF01774 UreD urease accessory protein BCE_3659 PF02492 CobW/HypB/UreG, nucleotide-binding domain BCE_3660 PF01730 UreF BCE_3661 PF05194 UreE urease accessory protein, C-terminal domain BCE_3661 PF02814 UreE urease accessory protein, N-terminal domain BCE_3662 PF01979 Amidohydrolase family BCE_3662 PF00449 Urease alpha-subunit, N-terminal domain BCE_3663 PF00699 Urease beta subunit BCE_3664 PF00547 Urease, gamma subunit BCE_3668 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BCE_3668 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BCE_3670 PF00512 His Kinase A (phospho-acceptor) domain BCE_3670 PF00989 PAS fold BCE_3670 PF13188 PAS domain BCE_3670 PF13426 PAS domain BCE_3670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_3671 PF01738 Dienelactone hydrolase family BCE_3672 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCE_3673 PF00474 Sodium:solute symporter family BCE_3674 PF01645 Conserved region in glutamate synthase BCE_3675 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BCE_3676 PF02559 CarD-like/TRCF domain BCE_3677 PF00491 Arginase family BCE_3678 PF01979 Amidohydrolase family BCE_3679 PF17392 Urocanase C-terminal domain BCE_3679 PF01175 Urocanase Rossmann-like domain BCE_3679 PF17391 Urocanase N-terminal domain BCE_3680 PF00221 Aromatic amino acid lyase BCE_3681 PF09021 HutP BCE_3682 PF01209 ubiE/COQ5 methyltransferase family BCE_3687 PF11084 Protein of unknown function (DUF2621) BCE_3691 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BCE_3694 PF07301 Protein of unknown function (DUF1453) BCE_3695 PF02683 Cytochrome C biogenesis protein transmembrane region BCE_3700 PF00005 ABC transporter BCE_3702 PF03466 LysR substrate binding domain BCE_3702 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCE_3703 PF03788 LrgA family BCE_3704 PF04172 LrgB-like family BCE_3705 PF13344 Haloacid dehalogenase-like hydrolase BCE_3705 PF00293 NUDIX domain BCE_3708 PF01925 Sulfite exporter TauE/SafE BCE_3710 PF01510 N-acetylmuramoyl-L-alanine amidase BCE_3710 PF01471 Putative peptidoglycan binding domain BCE_3713 PF01183 Glycosyl hydrolases family 25 BCE_3713 PF08239 Bacterial SH3 domain BCE_3714 PF00005 ABC transporter BCE_3714 PF00664 ABC transporter transmembrane region BCE_3715 PF00005 ABC transporter BCE_3715 PF00664 ABC transporter transmembrane region BCE_3716 PF03672 Uncharacterised protein family (UPF0154) BCE_3717 PF10747 Sporulation inhibitor of replication protein SirA BCE_3718 PF02779 Transketolase, pyrimidine binding domain BCE_3718 PF02780 Transketolase, C-terminal domain BCE_3718 PF00456 Transketolase, thiamine diphosphate binding domain BCE_3720 PF00528 Binding-protein-dependent transport system inner membrane component BCE_3721 PF00528 Binding-protein-dependent transport system inner membrane component BCE_3722 PF00005 ABC transporter BCE_3723 PF00497 Bacterial extracellular solute-binding proteins, family 3 BCE_3724 PF00149 Calcineurin-like phosphoesterase BCE_3724 PF02872 5'-nucleotidase, C-terminal domain BCE_3725 PF05979 Bacterial protein of unknown function (DUF896) BCE_3726 PF00239 Resolvase, N terminal domain BCE_3727 PF01726 LexA DNA binding domain BCE_3727 PF00717 Peptidase S24-like BCE_3730 PF03551 Transcriptional regulator PadR-like family BCE_3731 PF03951 Glutamine synthetase, beta-Grasp domain BCE_3731 PF00120 Glutamine synthetase, catalytic domain BCE_3732 PF13411 MerR HTH family regulatory protein BCE_3733 PF06838 Methionine gamma-lyase BCE_3734 PF01926 50S ribosome-binding GTPase BCE_3734 PF16360 GTP-binding GTPase Middle Region BCE_3734 PF13167 GTP-binding GTPase N-terminal BCE_3735 PF03458 UPF0126 domain BCE_3737 PF00004 ATPase family associated with various cellular activities (AAA) BCE_3737 PF17866 AAA lid domain BCE_3740 PF17209 Hfq protein BCE_3743 PF01476 LysM domain BCE_3743 PF06725 3D domain BCE_3744 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BCE_3744 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BCE_3745 PF00294 pfkB family carbohydrate kinase BCE_3746 PF08220 DeoR-like helix-turn-helix domain BCE_3746 PF00455 DeoR C terminal sensor domain BCE_3747 PF00465 Iron-containing alcohol dehydrogenase BCE_3748 PF04238 Protein of unknown function (DUF420) BCE_3751 PF00324 Amino acid permease BCE_3753 PF00704 Glycosyl hydrolases family 18 BCE_3753 PF00041 Fibronectin type III domain BCE_3754 PF10518 TAT (twin-arginine translocation) pathway signal sequence BCE_3754 PF00149 Calcineurin-like phosphoesterase BCE_3755 PF01226 Formate/nitrite transporter BCE_3756 PF00216 Bacterial DNA-binding protein BCE_3758 PF00403 Heavy-metal-associated domain BCE_3759 PF00403 Heavy-metal-associated domain BCE_3761 PF02583 Metal-sensitive transcriptional repressor BCE_3763 PF01545 Cation efflux family BCE_3763 PF16916 Dimerisation domain of Zinc Transporter BCE_3765 PF00300 Histidine phosphatase superfamily (branch 1) BCE_3766 PF01022 Bacterial regulatory protein, arsR family BCE_3767 PF00756 Putative esterase BCE_3768 PF00005 ABC transporter BCE_3769 PF01032 FecCD transport family BCE_3770 PF01032 FecCD transport family BCE_3771 PF01497 Periplasmic binding protein BCE_3772 PF02805 Metal binding domain of Ada BCE_3772 PF12833 Helix-turn-helix domain BCE_3773 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BCE_3773 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BCE_3774 PF00730 HhH-GPD superfamily base excision DNA repair protein BCE_3774 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain BCE_3775 PF01546 Peptidase family M20/M25/M40 BCE_3775 PF07687 Peptidase dimerisation domain BCE_3780 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCE_3781 PF00563 EAL domain BCE_3781 PF00990 Diguanylate cyclase, GGDEF domain BCE_3781 PF03707 Bacterial signalling protein N terminal repeat BCE_3787 PF10787 Uncharacterised protein from bacillus cereus group BCE_3788 PF04172 LrgB-like family BCE_3789 PF00155 Aminotransferase class I and II BCE_3789 PF00392 Bacterial regulatory proteins, gntR family BCE_3793 PF00388 Phosphatidylinositol-specific phospholipase C, X domain BCE_3794 PF00082 Subtilase family BCE_3795 PF07486 Cell Wall Hydrolase BCE_3797 PF00884 Sulfatase BCE_3798 PF00350 Dynamin family BCE_3801 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family BCE_3802 PF08676 MutL C terminal dimerisation domain BCE_3802 PF01119 DNA mismatch repair protein, C-terminal domain BCE_3803 PF00488 MutS domain V BCE_3803 PF05190 MutS family domain IV BCE_3803 PF01624 MutS domain I BCE_3803 PF05192 MutS domain III BCE_3803 PF05188 MutS domain II BCE_3804 PF10628 Outer spore coat protein E (CotE) BCE_3805 PF06133 Control of competence regulator ComK, YlbF/YmcA BCE_3806 PF00919 Uncharacterized protein family UPF0004 BCE_3806 PF01938 TRAM domain BCE_3806 PF04055 Radical SAM superfamily BCE_3808 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BCE_3809 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II BCE_3809 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg BCE_3809 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase BCE_3810 PF01244 Membrane dipeptidase (Peptidase family M19) BCE_3811 PF04232 Stage V sporulation protein S (SpoVS) BCE_3812 PF13277 YmdB-like protein BCE_3813 PF00013 KH domain BCE_3813 PF01966 HD domain BCE_3813 PF12072 Domain of unknown function (DUF3552) BCE_3815 PF00994 Probable molybdopterin binding domain BCE_3815 PF18146 Damage-inducible protein CinA KH domain BCE_3815 PF02464 Competence-damaged protein BCE_3816 PF01066 CDP-alcohol phosphatidyltransferase BCE_3817 PF13464 Domain of unknown function (DUF4115) BCE_3818 PF11868 Protein of unknown function (DUF3388) BCE_3819 PF11588 Protein of unknown function (DUF3243) BCE_3821 PF05193 Peptidase M16 inactive domain BCE_3821 PF00675 Insulinase (Peptidase family M16) BCE_3822 PF05193 Peptidase M16 inactive domain BCE_3827 PF00392 Bacterial regulatory proteins, gntR family BCE_3827 PF07702 UTRA domain BCE_3828 PF09397 Ftsk gamma domain BCE_3828 PF01580 FtsK/SpoIIIE family BCE_3828 PF17854 FtsK alpha domain BCE_3830 PF14035 YlzJ-like protein BCE_3831 PF00574 Clp protease BCE_3833 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BCE_3833 PF17770 Ribonuclease J C-terminal domain BCE_3833 PF00753 Metallo-beta-lactamase superfamily BCE_3835 PF00701 Dihydrodipicolinate synthetase family BCE_3836 PF00701 Dihydrodipicolinate synthetase family BCE_3837 PF13840 ACT domain BCE_3837 PF00696 Amino acid kinase family BCE_3838 PF02774 Semialdehyde dehydrogenase, dimerisation domain BCE_3838 PF01118 Semialdehyde dehydrogenase, NAD binding domain BCE_3839 PF02441 Flavoprotein BCE_3840 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BCE_3840 PF16924 Dipicolinate synthase subunit A N-terminal domain BCE_3842 PF05239 PRC-barrel domain BCE_3843 PF05193 Peptidase M16 inactive domain BCE_3843 PF00675 Insulinase (Peptidase family M16) BCE_3844 PF01522 Polysaccharide deacetylase BCE_3845 PF03725 3' exoribonuclease family, domain 2 BCE_3845 PF01138 3' exoribonuclease family, domain 1 BCE_3845 PF00575 S1 RNA binding domain BCE_3845 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BCE_3845 PF00013 KH domain BCE_3846 PF00312 Ribosomal protein S15 BCE_3847 PF01687 Riboflavin kinase BCE_3847 PF06574 FAD synthetase BCE_3848 PF01509 TruB family pseudouridylate synthase (N terminal domain) BCE_3848 PF16198 tRNA pseudouridylate synthase B C-terminal domain BCE_3849 PF02033 Ribosome-binding factor A BCE_3850 PF04456 Protein of unknown function (DUF503) BCE_3851 PF04760 Translation initiation factor IF-2, N-terminal region BCE_3851 PF11987 Translation-initiation factor 2 BCE_3851 PF00009 Elongation factor Tu GTP binding domain BCE_3852 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BCE_3853 PF04296 Protein of unknown function (DUF448) BCE_3854 PF08529 NusA N-terminal domain BCE_3854 PF13184 NusA-like KH domain BCE_3854 PF00575 S1 RNA binding domain BCE_3855 PF02576 RimP N-terminal domain BCE_3855 PF17384 RimP C-terminal SH3 domain BCE_3856 PF07733 Bacterial DNA polymerase III alpha NTPase domain BCE_3856 PF14480 DNA polymerase III polC-type N-terminus I BCE_3856 PF14579 Helix-hairpin-helix motif BCE_3856 PF02811 PHP domain BCE_3856 PF11490 DNA polymerase III polC-type N-terminus II BCE_3856 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BCE_3856 PF00929 Exonuclease BCE_3857 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BCE_3857 PF01348 Type II intron maturase BCE_3859 PF11490 DNA polymerase III polC-type N-terminus II BCE_3859 PF14579 Helix-hairpin-helix motif BCE_3859 PF14480 DNA polymerase III polC-type N-terminus I BCE_3859 PF00929 Exonuclease BCE_3859 PF07733 Bacterial DNA polymerase III alpha NTPase domain BCE_3859 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BCE_3859 PF02811 PHP domain BCE_3860 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BCE_3860 PF03129 Anticodon binding domain BCE_3860 PF04073 Aminoacyl-tRNA editing domain BCE_3861 PF02163 Peptidase family M50 BCE_3861 PF17820 PDZ domain BCE_3862 PF13288 DXP reductoisomerase C-terminal domain BCE_3862 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BCE_3862 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BCE_3864 PF01255 Putative undecaprenyl diphosphate synthase BCE_3865 PF01765 Ribosome recycling factor BCE_3866 PF00696 Amino acid kinase family BCE_3867 PF00889 Elongation factor TS BCE_3868 PF00318 Ribosomal protein S2 BCE_3869 PF08222 CodY helix-turn-helix domain BCE_3869 PF06018 CodY GAF-like domain BCE_3870 PF10431 C-terminal, D2-small domain, of ClpB protein BCE_3870 PF07724 AAA domain (Cdc48 subfamily) BCE_3870 PF00004 ATPase family associated with various cellular activities (AAA) BCE_3871 PF00004 ATPase family associated with various cellular activities (AAA) BCE_3871 PF10431 C-terminal, D2-small domain, of ClpB protein BCE_3871 PF07724 AAA domain (Cdc48 subfamily) BCE_3872 PF00227 Proteasome subunit BCE_3873 PF02899 Phage integrase, N-terminal SAM-like domain BCE_3873 PF00589 Phage integrase family BCE_3874 PF01134 Glucose inhibited division protein A BCE_3875 PF01131 DNA topoisomerase BCE_3875 PF01751 Toprim domain BCE_3875 PF01396 Topoisomerase DNA binding C4 zinc finger BCE_3876 PF02481 DNA recombination-mediator protein A BCE_3877 PF00549 CoA-ligase BCE_3877 PF02629 CoA binding domain BCE_3878 PF08442 ATP-grasp domain BCE_3878 PF00549 CoA-ligase BCE_3879 PF01351 Ribonuclease HII BCE_3880 PF01926 50S ribosome-binding GTPase BCE_3881 PF10502 Signal peptidase, peptidase S26 BCE_3882 PF01245 Ribosomal protein L19 BCE_3883 PF01746 tRNA (Guanine-1)-methyltransferase BCE_3884 PF01782 RimM N-terminal domain BCE_3884 PF05239 PRC-barrel domain BCE_3886 PF00886 Ribosomal protein S16 BCE_3887 PF02881 SRP54-type protein, helical bundle domain BCE_3887 PF00448 SRP54-type protein, GTPase domain BCE_3887 PF02978 Signal peptide binding domain BCE_3888 PF04297 Putative helix-turn-helix protein, YlxM / p13 like BCE_3889 PF00448 SRP54-type protein, GTPase domain BCE_3889 PF02881 SRP54-type protein, helical bundle domain BCE_3890 PF06470 SMC proteins Flexible Hinge Domain BCE_3890 PF02463 RecF/RecN/SMC N terminal domain BCE_3891 PF00035 Double-stranded RNA binding motif BCE_3891 PF14622 Ribonuclease-III-like BCE_3892 PF00550 Phosphopantetheine attachment site BCE_3894 PF00698 Acyl transferase domain BCE_3895 PF02504 Fatty acid synthesis protein BCE_3896 PF03061 Thioesterase superfamily BCE_3897 PF17191 RecG wedge domain BCE_3897 PF00270 DEAD/DEAH box helicase BCE_3897 PF00271 Helicase conserved C-terminal domain BCE_3898 PF13684 Dihydroxyacetone kinase family BCE_3898 PF02734 DAK2 domain BCE_3899 PF03780 Asp23 family, cell envelope-related function BCE_3900 PF00830 Ribosomal L28 family BCE_3901 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain BCE_3901 PF04263 Thiamin pyrophosphokinase, catalytic domain BCE_3902 PF00834 Ribulose-phosphate 3 epimerase family BCE_3903 PF03193 RsgA GTPase BCE_3903 PF16745 RsgA N-terminal domain BCE_3904 PF03793 PASTA domain BCE_3904 PF00069 Protein kinase domain BCE_3906 PF04055 Radical SAM superfamily BCE_3907 PF01029 NusB family BCE_3907 PF01189 16S rRNA methyltransferase RsmB/F BCE_3908 PF00551 Formyl transferase BCE_3908 PF02911 Formyl transferase, C-terminal domain BCE_3910 PF01327 Polypeptide deformylase BCE_3911 PF18074 Primosomal protein N C-terminal domain BCE_3911 PF17764 3′ DNA-binding domain (3′BD) BCE_3911 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BCE_3911 PF04851 Type III restriction enzyme, res subunit BCE_3911 PF00271 Helicase conserved C-terminal domain BCE_3912 PF04127 DNA / pantothenate metabolism flavoprotein BCE_3912 PF02441 Flavoprotein BCE_3914 PF00625 Guanylate kinase BCE_3915 PF04025 Domain of unknown function (DUF370) BCE_3916 PF08340 Domain of unknown function (DUF1732) BCE_3916 PF03755 YicC-like family, N-terminal region BCE_3917 PF00689 Cation transporting ATPase, C-terminus BCE_3917 PF00690 Cation transporter/ATPase, N-terminus BCE_3918 PF12323 Helix-turn-helix domain BCE_3918 PF01385 Probable transposase BCE_3918 PF07282 Putative transposase DNA-binding domain BCE_3921 PF01321 Creatinase/Prolidase N-terminal domain BCE_3921 PF00557 Metallopeptidase family M24 BCE_3927 PF00156 Phosphoribosyl transferase domain BCE_3928 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BCE_3929 PF01180 Dihydroorotate dehydrogenase BCE_3930 PF00175 Oxidoreductase NAD-binding domain BCE_3930 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B BCE_3931 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BCE_3931 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BCE_3931 PF02142 MGS-like domain BCE_3932 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BCE_3932 PF00117 Glutamine amidotransferase class-I BCE_3933 PF01979 Amidohydrolase family BCE_3934 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BCE_3934 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BCE_3935 PF00860 Permease family BCE_3936 PF00156 Phosphoribosyl transferase domain BCE_3937 PF00849 RNA pseudouridylate synthase BCE_3937 PF01479 S4 domain BCE_3938 PF01252 Signal peptidase (SPase) II BCE_3940 PF08264 Anticodon-binding domain of tRNA BCE_3940 PF00133 tRNA synthetases class I (I, L, M and V) BCE_3940 PF06827 Zinc finger found in FPG and IleRS BCE_3941 PF05103 DivIVA protein BCE_3942 PF01479 S4 domain BCE_3942 PF17774 Putative RNA-binding domain in YlmH BCE_3943 PF02325 YGGT family BCE_3944 PF04472 Cell division protein SepF BCE_3945 PF01168 Alanine racemase, N-terminal domain BCE_3947 PF05239 PRC-barrel domain BCE_3948 PF04542 Sigma-70 region 2 BCE_3948 PF04545 Sigma-70, region 4 BCE_3948 PF04539 Sigma-70 region 3 BCE_3949 PF04542 Sigma-70 region 2 BCE_3949 PF04545 Sigma-70, region 4 BCE_3950 PF03419 Sporulation factor SpoIIGA BCE_3951 PF12327 FtsZ family, C-terminal domain BCE_3951 PF00091 Tubulin/FtsZ family, GTPase domain BCE_3952 PF02491 SHS2 domain inserted in FTSA BCE_3954 PF08478 POTRA domain, FtsQ-type BCE_3954 PF03799 Cell division protein FtsQ BCE_3955 PF01565 FAD binding domain BCE_3955 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BCE_3956 PF04101 Glycosyltransferase family 28 C-terminal domain BCE_3956 PF03033 Glycosyltransferase family 28 N-terminal domain BCE_3957 PF01098 Cell cycle protein BCE_3958 PF08245 Mur ligase middle domain BCE_3958 PF02875 Mur ligase family, glutamate ligase domain BCE_3959 PF00953 Glycosyl transferase family 4 BCE_3959 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BCE_3960 PF01225 Mur ligase family, catalytic domain BCE_3960 PF02875 Mur ligase family, glutamate ligase domain BCE_3960 PF08245 Mur ligase middle domain BCE_3961 PF03717 Penicillin-binding Protein dimerisation domain BCE_3961 PF03793 PASTA domain BCE_3961 PF00905 Penicillin binding protein transpeptidase domain BCE_3963 PF04977 Septum formation initiator BCE_3964 PF01795 MraW methylase family BCE_3965 PF10079 Bacillithiol biosynthesis BshC BCE_3966 PF08546 Ketopantoate reductase PanE/ApbA C terminal BCE_3966 PF02558 Ketopantoate reductase PanE/ApbA BCE_3967 PF00583 Acetyltransferase (GNAT) family BCE_3969 PF01783 Ribosomal L32p protein family BCE_3970 PF02620 Large ribosomal RNA subunit accumulation protein YceD BCE_3971 PF05636 HIGH Nucleotidyl Transferase BCE_3972 PF05362 Lon protease (S16) C-terminal proteolytic domain BCE_3972 PF13180 PDZ domain BCE_3973 PF01734 Patatin-like phospholipase BCE_3975 PF07670 Nucleoside recognition BCE_3976 PF01467 Cytidylyltransferase-like BCE_3979 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) BCE_3980 PF06133 Control of competence regulator ComK, YlbF/YmcA BCE_3981 PF00300 Histidine phosphatase superfamily (branch 1) BCE_3982 PF14003 YlbE-like protein BCE_3983 PF14071 Putative coat protein BCE_3984 PF14504 CAP-associated N-terminal BCE_3984 PF00188 Cysteine-rich secretory protein family BCE_3986 PF08868 YugN-like family BCE_3987 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) BCE_3988 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BCE_3989 PF00510 Cytochrome c oxidase subunit III BCE_3990 PF00115 Cytochrome C and Quinol oxidase polypeptide I BCE_3991 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BCE_3991 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BCE_3991 PF00034 Cytochrome c BCE_3992 PF01040 UbiA prenyltransferase family BCE_3993 PF02628 Cytochrome oxidase assembly protein BCE_3994 PF00682 HMGL-like BCE_3994 PF02785 Biotin carboxylase C-terminal domain BCE_3994 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BCE_3994 PF00289 Biotin carboxylase, N-terminal domain BCE_3994 PF02436 Conserved carboxylase domain BCE_3994 PF00364 Biotin-requiring enzyme BCE_3995 PF01098 Cell cycle protein BCE_3996 PF07408 Protein of unknown function (DUF1507) BCE_3998 PF02562 PhoH-like protein BCE_3998 PF13638 PIN domain BCE_4000 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) BCE_4002 PF14036 YlaH-like protein BCE_4005 PF00459 Inositol monophosphatase family BCE_4007 PF06335 Protein of unknown function (DUF1054) BCE_4008 PF05256 Uncharacterised protein family (UPF0223) BCE_4009 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BCE_4009 PF01276 Orn/Lys/Arg decarboxylase, major domain BCE_4018 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCE_4018 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BCE_4019 PF02817 e3 binding domain BCE_4019 PF00364 Biotin-requiring enzyme BCE_4019 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BCE_4020 PF02780 Transketolase, C-terminal domain BCE_4020 PF02779 Transketolase, pyrimidine binding domain BCE_4021 PF00676 Dehydrogenase E1 component BCE_4023 PF01327 Polypeptide deformylase BCE_4026 PF00753 Metallo-beta-lactamase superfamily BCE_4026 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BCE_4026 PF17770 Ribonuclease J C-terminal domain BCE_4027 PF02254 TrkA-N domain BCE_4027 PF02080 TrkA-C domain BCE_4029 PF07687 Peptidase dimerisation domain BCE_4029 PF01546 Peptidase family M20/M25/M40 BCE_4030 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal BCE_4030 PF00132 Bacterial transferase hexapeptide (six repeats) BCE_4030 PF14602 Hexapeptide repeat of succinyl-transferase BCE_4031 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCE_4031 PF03466 LysR substrate binding domain BCE_4034 PF04308 Ribonuclease H-like BCE_4036 PF08796 Protein of unknown function (DUF1797) BCE_4039 PF10388 EAL-domain associated signalling protein domain BCE_4039 PF00563 EAL domain BCE_4041 PF10518 TAT (twin-arginine translocation) pathway signal sequence BCE_4041 PF00149 Calcineurin-like phosphoesterase BCE_4043 PF13089 Polyphosphate kinase N-terminal domain BCE_4043 PF13090 Polyphosphate kinase C-terminal domain 2 BCE_4043 PF02503 Polyphosphate kinase middle domain BCE_4043 PF17941 Polyphosphate kinase C-terminal domain 1 BCE_4044 PF02541 Ppx/GppA phosphatase family BCE_4045 PF14177 YkyB-like protein BCE_4051 PF07690 Major Facilitator Superfamily BCE_4053 PF08267 Cobalamin-independent synthase, N-terminal domain BCE_4053 PF01717 Cobalamin-independent synthase, Catalytic domain BCE_4055 PF14040 Deoxyribonuclease NucA/NucB BCE_4058 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_4058 PF00512 His Kinase A (phospho-acceptor) domain BCE_4060 PF00155 Aminotransferase class I and II BCE_4061 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BCE_4061 PF00356 Bacterial regulatory proteins, lacI family BCE_4062 PF00528 Binding-protein-dependent transport system inner membrane component BCE_4063 PF00528 Binding-protein-dependent transport system inner membrane component BCE_4064 PF13416 Bacterial extracellular solute-binding protein BCE_4065 PF00128 Alpha amylase, catalytic domain BCE_4065 PF16657 Maltogenic Amylase, C-terminal domain BCE_4065 PF02903 Alpha amylase, N-terminal ig-like domain BCE_4066 PF16657 Maltogenic Amylase, C-terminal domain BCE_4066 PF00128 Alpha amylase, catalytic domain BCE_4067 PF17912 MalK OB fold domain BCE_4067 PF00005 ABC transporter BCE_4067 PF03459 TOBE domain BCE_4075 PF02463 RecF/RecN/SMC N terminal domain BCE_4076 PF02803 Thiolase, C-terminal domain BCE_4076 PF00108 Thiolase, N-terminal domain BCE_4077 PF00293 NUDIX domain BCE_4083 PF03551 Transcriptional regulator PadR-like family BCE_4088 PF02899 Phage integrase, N-terminal SAM-like domain BCE_4088 PF00589 Phage integrase family BCE_4091 PF01978 Sugar-specific transcriptional regulator TrmB BCE_4091 PF11495 Archaeal transcriptional regulator TrmB BCE_4092 PF03591 AzlC protein BCE_4095 PF13520 Amino acid permease BCE_4098 PF01008 Initiation factor 2 subunit family BCE_4099 PF01636 Phosphotransferase enzyme family BCE_4101 PF00795 Carbon-nitrogen hydrolase BCE_4102 PF00155 Aminotransferase class I and II BCE_4103 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain BCE_4103 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain BCE_4105 PF00596 Class II Aldolase and Adducin N-terminal domain BCE_4106 PF03079 ARD/ARD' family BCE_4109 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BCE_4109 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BCE_4110 PF00144 Beta-lactamase BCE_4111 PF00990 Diguanylate cyclase, GGDEF domain BCE_4112 PF00881 Nitroreductase family BCE_4115 PF02896 PEP-utilising enzyme, TIM barrel domain BCE_4115 PF05524 PEP-utilising enzyme, N-terminal BCE_4115 PF00391 PEP-utilising enzyme, mobile domain BCE_4116 PF00381 PTS HPr component phosphorylation site BCE_4117 PF02378 Phosphotransferase system, EIIC BCE_4117 PF00367 phosphotransferase system, EIIB BCE_4117 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BCE_4118 PF00874 PRD domain BCE_4118 PF03123 CAT RNA binding domain BCE_4121 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BCE_4122 PF01979 Amidohydrolase family BCE_4124 PF04079 Segregation and condensation complex subunit ScpB BCE_4125 PF02616 Segregation and condensation protein ScpA BCE_4127 PF03745 Domain of unknown function (DUF309) BCE_4128 PF00583 Acetyltransferase (GNAT) family BCE_4131 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BCE_4132 PF06207 Protein of unknown function (DUF1002) BCE_4134 PF03323 Bacillus/Clostridium GerA spore germination protein BCE_4136 PF07451 Stage V sporulation protein AD (SpoVAD) BCE_4137 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BCE_4138 PF13782 Stage V sporulation protein AB BCE_4139 PF12164 Stage V sporulation protein AA BCE_4141 PF00209 Sodium:neurotransmitter symporter family BCE_4142 PF04545 Sigma-70, region 4 BCE_4142 PF04539 Sigma-70 region 3 BCE_4142 PF04542 Sigma-70 region 2 BCE_4143 PF13581 Histidine kinase-like ATPase domain BCE_4144 PF01740 STAS domain BCE_4145 PF00768 D-alanyl-D-alanine carboxypeptidase BCE_4145 PF07943 Penicillin-binding protein 5, C-terminal domain BCE_4146 PF00392 Bacterial regulatory proteins, gntR family BCE_4147 PF00005 ABC transporter BCE_4150 PF01047 MarR family BCE_4152 PF00860 Permease family BCE_4153 PF01544 CorA-like Mg2+ transporter protein BCE_4154 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BCE_4154 PF02885 Glycosyl transferase family, helical bundle domain BCE_4154 PF00591 Glycosyl transferase family, a/b domain BCE_4155 PF01048 Phosphorylase superfamily BCE_4156 PF01676 Metalloenzyme superfamily BCE_4158 PF02899 Phage integrase, N-terminal SAM-like domain BCE_4158 PF00589 Phage integrase family BCE_4159 PF14004 Protein of unknown function (DUF4227) BCE_4160 PF01475 Ferric uptake regulator family BCE_4161 PF01944 Stage II sporulation protein M BCE_4163 PF00293 NUDIX domain BCE_4164 PF13072 Mother cell inhibitor of FtsZ BCE_4165 PF00248 Aldo/keto reductase family BCE_4166 PF00248 Aldo/keto reductase family BCE_4167 PF13673 Acetyltransferase (GNAT) domain BCE_4167 PF04229 GrpB protein BCE_4169 PF02872 5'-nucleotidase, C-terminal domain BCE_4169 PF00149 Calcineurin-like phosphoesterase BCE_4169 PF00746 LPXTG cell wall anchor motif BCE_4169 PF00565 Staphylococcal nuclease homologue BCE_4171 PF12146 Serine aminopeptidase, S33 BCE_4172 PF03553 Na+/H+ antiporter family BCE_4172 PF13726 Na+-H+ antiporter family BCE_4173 PF00356 Bacterial regulatory proteins, lacI family BCE_4174 PF00583 Acetyltransferase (GNAT) family BCE_4175 PF12146 Serine aminopeptidase, S33 BCE_4176 PF10827 Protein of unknown function (DUF2552) BCE_4179 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BCE_4179 PF01872 RibD C-terminal domain BCE_4180 PF00677 Lumazine binding domain BCE_4181 PF00925 GTP cyclohydrolase II BCE_4181 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BCE_4182 PF00885 6,7-dimethyl-8-ribityllumazine synthase BCE_4184 PF06968 Biotin and Thiamin Synthesis associated domain BCE_4184 PF04055 Radical SAM superfamily BCE_4185 PF13847 Methyltransferase domain BCE_4186 PF08241 Methyltransferase domain BCE_4186 PF12697 Alpha/beta hydrolase family BCE_4187 PF00155 Aminotransferase class I and II BCE_4189 PF00202 Aminotransferase class-III BCE_4194 PF02872 5'-nucleotidase, C-terminal domain BCE_4194 PF00149 Calcineurin-like phosphoesterase BCE_4196 PF01037 Lrp/AsnC ligand binding domain BCE_4196 PF13404 AsnC-type helix-turn-helix domain BCE_4199 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BCE_4199 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BCE_4200 PF00202 Aminotransferase class-III BCE_4201 PF00696 Amino acid kinase family BCE_4202 PF01960 ArgJ family BCE_4203 PF02774 Semialdehyde dehydrogenase, dimerisation domain BCE_4203 PF01118 Semialdehyde dehydrogenase, NAD binding domain BCE_4205 PF00106 short chain dehydrogenase BCE_4206 PF00753 Metallo-beta-lactamase superfamily BCE_4207 PF14748 Pyrroline-5-carboxylate reductase dimerisation BCE_4207 PF03807 NADP oxidoreductase coenzyme F420-dependent BCE_4208 PF03313 Serine dehydratase alpha chain BCE_4209 PF03315 Serine dehydratase beta chain BCE_4209 PF01842 ACT domain BCE_4210 PF00753 Metallo-beta-lactamase superfamily BCE_4210 PF12706 Beta-lactamase superfamily domain BCE_4212 PF00689 Cation transporting ATPase, C-terminus BCE_4212 PF00690 Cation transporter/ATPase, N-terminus BCE_4213 PF02308 MgtC family BCE_4214 PF11798 IMS family HHH motif BCE_4214 PF11799 impB/mucB/samB family C-terminal domain BCE_4214 PF00817 impB/mucB/samB family BCE_4216 PF01546 Peptidase family M20/M25/M40 BCE_4216 PF07687 Peptidase dimerisation domain BCE_4217 PF13302 Acetyltransferase (GNAT) domain BCE_4221 PF03734 L,D-transpeptidase catalytic domain BCE_4222 PF11728 Putative aromatic acid exporter C-terminal domain BCE_4222 PF06081 Aromatic acid exporter family member 1 BCE_4223 PF00005 ABC transporter BCE_4224 PF00528 Binding-protein-dependent transport system inner membrane component BCE_4225 PF00497 Bacterial extracellular solute-binding proteins, family 3 BCE_4227 PF06491 Disulphide isomerase BCE_4228 PF11208 Protein of unknown function (DUF2992) BCE_4229 PF09297 NADH pyrophosphatase zinc ribbon domain BCE_4229 PF00293 NUDIX domain BCE_4230 PF04239 Protein of unknown function (DUF421) BCE_4231 PF01098 Cell cycle protein BCE_4232 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BCE_4232 PF00364 Biotin-requiring enzyme BCE_4232 PF02817 e3 binding domain BCE_4233 PF02780 Transketolase, C-terminal domain BCE_4233 PF02779 Transketolase, pyrimidine binding domain BCE_4234 PF00676 Dehydrogenase E1 component BCE_4235 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BCE_4235 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCE_4236 PF00871 Acetokinase family BCE_4237 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BCE_4237 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BCE_4238 PF01515 Phosphate acetyl/butaryl transferase BCE_4239 PF00158 Sigma-54 interaction domain BCE_4239 PF00989 PAS fold BCE_4239 PF02954 Bacterial regulatory protein, Fis family BCE_4240 PF11118 Protein of unknown function (DUF2627) BCE_4241 PF03009 Glycerophosphoryl diester phosphodiesterase family BCE_4242 PF14174 YycC-like protein BCE_4243 PF00072 Response regulator receiver domain BCE_4243 PF08769 Sporulation initiation factor Spo0A C terminal BCE_4245 PF17820 PDZ domain BCE_4245 PF05580 SpoIVB peptidase S55 BCE_4246 PF13476 AAA domain BCE_4247 PF02863 Arginine repressor, C-terminal domain BCE_4247 PF01316 Arginine repressor, DNA binding domain BCE_4248 PF01479 S4 domain BCE_4248 PF01728 FtsJ-like methyltransferase BCE_4249 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BCE_4249 PF02779 Transketolase, pyrimidine binding domain BCE_4249 PF02780 Transketolase, C-terminal domain BCE_4251 PF00348 Polyprenyl synthetase BCE_4252 PF02609 Exonuclease VII small subunit BCE_4253 PF02601 Exonuclease VII, large subunit BCE_4253 PF13742 OB-fold nucleic acid binding domain BCE_4254 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BCE_4254 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BCE_4255 PF01029 NusB family BCE_4256 PF03780 Asp23 family, cell envelope-related function BCE_4257 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BCE_4257 PF00289 Biotin carboxylase, N-terminal domain BCE_4257 PF02785 Biotin carboxylase C-terminal domain BCE_4258 PF00364 Biotin-requiring enzyme BCE_4259 PF12685 SpoIIIAH-like protein BCE_4261 PF09581 Stage III sporulation protein AF (Spore_III_AF) BCE_4262 PF09546 Stage III sporulation protein AE (spore_III_AE) BCE_4263 PF06686 Stage III sporulation protein AC/AD protein family BCE_4264 PF06686 Stage III sporulation protein AC/AD protein family BCE_4265 PF09548 Stage III sporulation protein AB (spore_III_AB) BCE_4270 PF08207 Elongation factor P (EF-P) KOW-like domain BCE_4270 PF01132 Elongation factor P (EF-P) OB domain BCE_4270 PF09285 Elongation factor P, C-terminal BCE_4271 PF00557 Metallopeptidase family M24 BCE_4271 PF01321 Creatinase/Prolidase N-terminal domain BCE_4272 PF01220 Dehydroquinase class II BCE_4273 PF11085 Conserved membrane protein YqhR BCE_4274 PF07136 Protein of unknown function (DUF1385) BCE_4276 PF13419 Haloacid dehalogenase-like hydrolase BCE_4277 PF02742 Iron dependent repressor, metal binding and dimerisation domain BCE_4277 PF01325 Iron dependent repressor, N-terminal DNA binding domain BCE_4284 PF03099 Biotin/lipoate A/B protein ligase family BCE_4285 PF00581 Rhodanese-like domain BCE_4286 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BCE_4286 PF00356 Bacterial regulatory proteins, lacI family BCE_4288 PF00893 Small Multidrug Resistance protein BCE_4289 PF00893 Small Multidrug Resistance protein BCE_4298 PF00005 ABC transporter BCE_4299 PF00392 Bacterial regulatory proteins, gntR family BCE_4303 PF02347 Glycine cleavage system P-protein BCE_4304 PF02347 Glycine cleavage system P-protein BCE_4305 PF08669 Glycine cleavage T-protein C-terminal barrel domain BCE_4305 PF01571 Aminomethyltransferase folate-binding domain BCE_4306 PF00176 SNF2 family N-terminal domain BCE_4306 PF00271 Helicase conserved C-terminal domain BCE_4307 PF11079 Bacterial protein YqhG of unknown function BCE_4312 PF14038 YqzE-like protein BCE_4313 PF01202 Shikimate kinase BCE_4318 PF07963 Prokaryotic N-terminal methylation motif BCE_4320 PF00482 Type II secretion system (T2SS), protein F BCE_4321 PF00437 Type II/IV secretion system protein BCE_4323 PF11117 Protein of unknown function (DUF2626) BCE_4324 PF00375 Sodium:dicarboxylate symporter family BCE_4331 PF04101 Glycosyltransferase family 28 C-terminal domain BCE_4331 PF03033 Glycosyltransferase family 28 N-terminal domain BCE_4332 PF02574 Homocysteine S-methyltransferase BCE_4332 PF00809 Pterin binding enzyme BCE_4332 PF02965 Vitamin B12 dependent methionine synthase, activation domain BCE_4332 PF02607 B12 binding domain BCE_4332 PF02310 B12 binding domain BCE_4333 PF02219 Methylenetetrahydrofolate reductase BCE_4333 PF02574 Homocysteine S-methyltransferase BCE_4336 PF01053 Cys/Met metabolism PLP-dependent enzyme BCE_4337 PF01053 Cys/Met metabolism PLP-dependent enzyme BCE_4339 PF01022 Bacterial regulatory protein, arsR family BCE_4341 PF00753 Metallo-beta-lactamase superfamily BCE_4342 PF10958 Protein of unknown function (DUF2759) BCE_4343 PF00480 ROK family BCE_4344 PF06014 Bacterial protein of unknown function (DUF910) BCE_4345 PF01812 5-formyltetrahydrofolate cyclo-ligase family BCE_4346 PF00471 Ribosomal protein L33 BCE_4347 PF00483 Nucleotidyl transferase BCE_4348 PF01895 PhoU domain BCE_4349 PF00005 ABC transporter BCE_4350 PF00528 Binding-protein-dependent transport system inner membrane component BCE_4351 PF00528 Binding-protein-dependent transport system inner membrane component BCE_4352 PF12849 PBP superfamily domain BCE_4354 PF07690 Major Facilitator Superfamily BCE_4355 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BCE_4355 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BCE_4358 PF04551 GcpE protein BCE_4359 PF01475 Ferric uptake regulator family BCE_4360 PF00950 ABC 3 transport family BCE_4361 PF00005 ABC transporter BCE_4362 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BCE_4362 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BCE_4363 PF11116 Protein of unknown function (DUF2624) BCE_4364 PF01261 Xylose isomerase-like TIM barrel BCE_4365 PF01261 Xylose isomerase-like TIM barrel BCE_4366 PF00271 Helicase conserved C-terminal domain BCE_4366 PF00270 DEAD/DEAH box helicase BCE_4368 PF02401 LytB protein BCE_4369 PF01784 NIF3 (NGG1p interacting factor 3) BCE_4370 PF04816 tRNA (adenine(22)-N(1))-methyltransferase BCE_4371 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BCE_4372 PF04545 Sigma-70, region 4 BCE_4372 PF00140 Sigma-70 factor, region 1.2 BCE_4372 PF03979 Sigma-70 factor, region 1.1 BCE_4372 PF04539 Sigma-70 region 3 BCE_4372 PF04542 Sigma-70 region 2 BCE_4374 PF01807 CHC2 zinc finger BCE_4374 PF10410 DnaB-helicase binding domain of primase BCE_4374 PF08275 DNA primase catalytic core, N-terminal domain BCE_4376 PF03618 Kinase/pyrophosphorylase BCE_4377 PF08279 HTH domain BCE_4377 PF00571 CBS domain BCE_4378 PF11967 Recombination protein O N terminal BCE_4378 PF02565 Recombination protein O C terminal BCE_4380 PF01926 50S ribosome-binding GTPase BCE_4380 PF07650 KH domain BCE_4381 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BCE_4382 PF01219 Prokaryotic diacylglycerol kinase BCE_4383 PF02130 Uncharacterized protein family UPF0054 BCE_4384 PF07698 7TM receptor with intracellular HD hydrolase BCE_4384 PF07697 7TM-HD extracellular BCE_4384 PF01966 HD domain BCE_4385 PF02562 PhoH-like protein BCE_4386 PF06898 Putative stage IV sporulation protein YqfD BCE_4388 PF07873 YabP family BCE_4389 PF09424 Yqey-like protein BCE_4390 PF01165 Ribosomal protein S21 BCE_4391 PF01938 TRAM domain BCE_4391 PF00919 Uncharacterized protein family UPF0004 BCE_4391 PF04055 Radical SAM superfamily BCE_4392 PF04452 RNA methyltransferase BCE_4394 PF01556 DnaJ C terminal domain BCE_4394 PF00684 DnaJ central domain BCE_4394 PF00226 DnaJ domain BCE_4395 PF00012 Hsp70 protein BCE_4396 PF01025 GrpE BCE_4397 PF01628 HrcA protein C terminal domain BCE_4398 PF04055 Radical SAM superfamily BCE_4398 PF06969 HemN C-terminal domain BCE_4399 PF01638 HxlR-like helix-turn-helix BCE_4400 PF06421 GTP-binding protein LepA C-terminus BCE_4400 PF03144 Elongation factor Tu domain 2 BCE_4400 PF00009 Elongation factor Tu GTP binding domain BCE_4400 PF00679 Elongation factor G C-terminus BCE_4402 PF03418 Germination protease BCE_4403 PF01649 Ribosomal protein S20 BCE_4404 PF06144 DNA polymerase III, delta subunit BCE_4405 PF14141 YqzM-like protein BCE_4406 PF13567 Domain of unknown function (DUF4131) BCE_4406 PF03772 Competence protein BCE_4406 PF00753 Metallo-beta-lactamase superfamily BCE_4407 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BCE_4408 PF10531 SLBB domain BCE_4409 PF14748 Pyrroline-5-carboxylate reductase dimerisation BCE_4409 PF03807 NADP oxidoreductase coenzyme F420-dependent BCE_4410 PF13649 Methyltransferase domain BCE_4412 PF01966 HD domain BCE_4413 PF01467 Cytidylyltransferase-like BCE_4414 PF01985 CRS1 / YhbY (CRM) domain BCE_4415 PF08501 Shikimate dehydrogenase substrate binding domain BCE_4415 PF01488 Shikimate / quinate 5-dehydrogenase BCE_4415 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BCE_4416 PF01926 50S ribosome-binding GTPase BCE_4419 PF02666 Phosphatidylserine decarboxylase BCE_4421 PF04545 Sigma-70, region 4 BCE_4421 PF04542 Sigma-70 region 2 BCE_4424 PF00471 Ribosomal protein L33 BCE_4425 PF04607 Region found in RelA / SpoT proteins BCE_4427 PF00245 Alkaline phosphatase BCE_4430 PF00561 alpha/beta hydrolase fold BCE_4430 PF08386 TAP-like protein BCE_4437 PF00082 Subtilase family BCE_4437 PF02225 PA domain BCE_4437 PF13860 FlgD Ig-like domain BCE_4437 PF05922 Peptidase inhibitor I9 BCE_4439 PF00351 Biopterin-dependent aromatic amino acid hydroxylase BCE_4441 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCE_4442 PF07681 DoxX BCE_4448 PF00005 ABC transporter BCE_4449 PF01032 FecCD transport family BCE_4450 PF01497 Periplasmic binding protein BCE_4453 PF00171 Aldehyde dehydrogenase family BCE_4453 PF00465 Iron-containing alcohol dehydrogenase BCE_4454 PF01053 Cys/Met metabolism PLP-dependent enzyme BCE_4455 PF00291 Pyridoxal-phosphate dependent enzyme BCE_4456 PF01048 Phosphorylase superfamily BCE_4457 PF08241 Methyltransferase domain BCE_4460 PF00905 Penicillin binding protein transpeptidase domain BCE_4460 PF03717 Penicillin-binding Protein dimerisation domain BCE_4461 PF01272 Transcription elongation factor, GreA/GreB, C-term BCE_4461 PF03449 Transcription elongation factor, N-terminal BCE_4462 PF00485 Phosphoribulokinase / Uridine kinase family BCE_4466 PF02618 YceG-like family BCE_4468 PF06949 Protein of unknown function (DUF1292) BCE_4469 PF03652 Holliday junction resolvase BCE_4470 PF06135 IreB regulatory phosphoprotein BCE_4471 PF02272 DHHA1 domain BCE_4471 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BCE_4471 PF01411 tRNA synthetases class II (A) BCE_4473 PF01594 AI-2E family transporter BCE_4477 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain BCE_4477 PF13538 UvrD-like helicase C-terminal domain BCE_4477 PF14490 Helix-hairpin-helix containing domain BCE_4480 PF00266 Aminotransferase class-V BCE_4481 PF02082 Transcriptional regulator BCE_4482 PF12002 MgsA AAA+ ATPase C terminal BCE_4482 PF16193 AAA C-terminal domain BCE_4482 PF05496 Holliday junction DNA helicase RuvB P-loop domain BCE_4484 PF00899 ThiF family BCE_4485 PF02938 GAD domain BCE_4485 PF01336 OB-fold nucleic acid binding domain BCE_4485 PF00152 tRNA synthetases class II (D, K and N) BCE_4486 PF03129 Anticodon binding domain BCE_4486 PF13393 Histidyl-tRNA synthetase BCE_4490 PF02580 D-Tyr-tRNA(Tyr) deacylase BCE_4491 PF02824 TGS domain BCE_4491 PF04607 Region found in RelA / SpoT proteins BCE_4491 PF13291 ACT domain BCE_4492 PF00156 Phosphoribosyl transferase domain BCE_4493 PF17768 RecJ OB domain BCE_4493 PF02272 DHHA1 domain BCE_4493 PF01368 DHH family BCE_4493 PF10141 Single-strand DNA-specific exonuclease, C terminal domain BCE_4494 PF16916 Dimerisation domain of Zinc Transporter BCE_4494 PF01545 Cation efflux family BCE_4496 PF02355 Protein export membrane protein BCE_4496 PF07549 SecD/SecF GG Motif BCE_4497 PF13797 Post-transcriptional regulator BCE_4498 PF14667 Polysaccharide biosynthesis C-terminal domain BCE_4498 PF01943 Polysaccharide biosynthesis protein BCE_4499 PF04239 Protein of unknown function (DUF421) BCE_4501 PF02699 Preprotein translocase subunit BCE_4502 PF01702 Queuine tRNA-ribosyltransferase BCE_4503 PF02547 Queuosine biosynthesis protein BCE_4504 PF11146 Protein of unknown function (DUF2905) BCE_4505 PF05496 Holliday junction DNA helicase RuvB P-loop domain BCE_4505 PF17864 RuvB AAA lid domain BCE_4505 PF05491 RuvB C-terminal winged helix domain BCE_4506 PF07499 RuvA, C-terminal domain BCE_4506 PF01330 RuvA N terminal domain BCE_4508 PF00892 EamA-like transporter family BCE_4509 PF01022 Bacterial regulatory protein, arsR family BCE_4512 PF01476 LysM domain BCE_4513 PF02445 Quinolinate synthetase A protein BCE_4514 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BCE_4514 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BCE_4515 PF00890 FAD binding domain BCE_4515 PF02910 Fumarate reductase flavoprotein C-term BCE_4516 PF00266 Aminotransferase class-V BCE_4517 PF02829 3H domain BCE_4517 PF08279 HTH domain BCE_4518 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BCE_4519 PF01022 Bacterial regulatory protein, arsR family BCE_4521 PF00171 Aldehyde dehydrogenase family BCE_4522 PF01022 Bacterial regulatory protein, arsR family BCE_4524 PF03475 3-alpha domain BCE_4524 PF03473 MOSC domain BCE_4525 PF00800 Prephenate dehydratase BCE_4525 PF01842 ACT domain BCE_4526 PF02687 FtsX-like permease family BCE_4527 PF02687 FtsX-like permease family BCE_4528 PF00005 ABC transporter BCE_4530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_4531 PF00486 Transcriptional regulatory protein, C terminal BCE_4531 PF00072 Response regulator receiver domain BCE_4532 PF01926 50S ribosome-binding GTPase BCE_4532 PF01018 GTP1/OBG BCE_4532 PF09269 Domain of unknown function (DUF1967) BCE_4533 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BCE_4533 PF14682 Sporulation initiation phospho-transferase B, C-terminal BCE_4534 PF01016 Ribosomal L27 protein BCE_4535 PF04327 Cysteine protease Prp BCE_4536 PF00829 Ribosomal prokaryotic L21 protein BCE_4537 PF00575 S1 RNA binding domain BCE_4537 PF10150 Ribonuclease E/G family BCE_4538 PF02163 Peptidase family M50 BCE_4539 PF01551 Peptidase family M23 BCE_4540 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BCE_4541 PF03775 Septum formation inhibitor MinC, C-terminal domain BCE_4543 PF04085 rod shape-determining protein MreC BCE_4545 PF04002 RadC-like JAB domain BCE_4546 PF02545 Maf-like protein BCE_4548 PF02875 Mur ligase family, glutamate ligase domain BCE_4548 PF08245 Mur ligase middle domain BCE_4549 PF10458 Valyl tRNA synthetase tRNA binding arm BCE_4549 PF00133 tRNA synthetases class I (I, L, M and V) BCE_4549 PF08264 Anticodon-binding domain of tRNA BCE_4551 PF01476 LysM domain BCE_4552 PF00202 Aminotransferase class-III BCE_4553 PF00490 Delta-aminolevulinic acid dehydratase BCE_4554 PF02602 Uroporphyrinogen-III synthase HemD BCE_4555 PF03900 Porphobilinogen deaminase, C-terminal domain BCE_4555 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BCE_4556 PF01578 Cytochrome C assembly protein BCE_4557 PF01488 Shikimate / quinate 5-dehydrogenase BCE_4557 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BCE_4557 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BCE_4558 PF01047 MarR family BCE_4559 PF02566 OsmC-like protein BCE_4560 PF01926 50S ribosome-binding GTPase BCE_4561 PF05362 Lon protease (S16) C-terminal proteolytic domain BCE_4561 PF00004 ATPase family associated with various cellular activities (AAA) BCE_4561 PF02190 ATP-dependent protease La (LON) substrate-binding domain BCE_4562 PF00004 ATPase family associated with various cellular activities (AAA) BCE_4562 PF05362 Lon protease (S16) C-terminal proteolytic domain BCE_4563 PF07724 AAA domain (Cdc48 subfamily) BCE_4563 PF10431 C-terminal, D2-small domain, of ClpB protein BCE_4563 PF06689 ClpX C4-type zinc finger BCE_4564 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BCE_4564 PF05697 Bacterial trigger factor protein (TF) BCE_4564 PF05698 Bacterial trigger factor protein (TF) C-terminus BCE_4570 PF11724 YvbH-like oligomerisation region BCE_4570 PF08000 Bacterial PH domain BCE_4575 PF13476 AAA domain BCE_4575 PF10088 Uncharacterised protein conserved in bacteria (DUF2326) BCE_4577 PF00149 Calcineurin-like phosphoesterase BCE_4584 PF12850 Calcineurin-like phosphoesterase superfamily domain BCE_4585 PF01725 Ham1 family BCE_4586 PF03725 3' exoribonuclease family, domain 2 BCE_4586 PF01138 3' exoribonuclease family, domain 1 BCE_4587 PF10646 Sporulation and spore germination BCE_4589 PF01177 Asp/Glu/Hydantoin racemase BCE_4590 PF07690 Major Facilitator Superfamily BCE_4592 PF00440 Bacterial regulatory proteins, tetR family BCE_4593 PF01965 DJ-1/PfpI family BCE_4594 PF00196 Bacterial regulatory proteins, luxR family BCE_4596 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system BCE_4605 PF12728 Helix-turn-helix domain BCE_4605 PF00145 C-5 cytosine-specific DNA methylase BCE_4610 PF01368 DHH family BCE_4610 PF10141 Single-strand DNA-specific exonuclease, C terminal domain BCE_4610 PF02272 DHHA1 domain BCE_4610 PF17768 RecJ OB domain BCE_4626 PF00196 Bacterial regulatory proteins, luxR family BCE_4627 PF00860 Permease family BCE_4628 PF07969 Amidohydrolase family BCE_4629 PF07969 Amidohydrolase family BCE_4630 PF04024 PspC domain BCE_4631 PF01381 Helix-turn-helix BCE_4631 PF07883 Cupin domain BCE_4632 PF13536 Putative multidrug resistance efflux transporter BCE_4633 PF00230 Major intrinsic protein BCE_4634 PF02082 Transcriptional regulator BCE_4636 PF13732 Domain of unknown function (DUF4162) BCE_4636 PF00005 ABC transporter BCE_4638 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) BCE_4639 PF00691 OmpA family BCE_4639 PF13677 Membrane MotB of proton-channel complex MotA/MotB BCE_4640 PF01618 MotA/TolQ/ExbB proton channel family BCE_4641 PF02557 D-alanyl-D-alanine carboxypeptidase BCE_4642 PF03061 Thioesterase superfamily BCE_4643 PF13183 4Fe-4S dicluster domain BCE_4643 PF13085 2Fe-2S iron-sulfur cluster binding domain BCE_4644 PF02910 Fumarate reductase flavoprotein C-term BCE_4644 PF00890 FAD binding domain BCE_4645 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BCE_4646 PF10702 Protein of unknown function (DUF2507) BCE_4647 PF08459 UvrC Helix-hairpin-helix N-terminal BCE_4647 PF02151 UvrB/uvrC motif BCE_4647 PF01541 GIY-YIG catalytic domain BCE_4648 PF00085 Thioredoxin BCE_4649 PF00766 Electron transfer flavoprotein FAD-binding domain BCE_4649 PF01012 Electron transfer flavoprotein domain BCE_4650 PF01012 Electron transfer flavoprotein domain BCE_4651 PF00378 Enoyl-CoA hydratase/isomerase BCE_4652 PF08359 YsiA-like protein, C-terminal region BCE_4652 PF00440 Bacterial regulatory proteins, tetR family BCE_4653 PF00501 AMP-binding enzyme BCE_4653 PF13193 AMP-binding enzyme C-terminal domain BCE_4655 PF05163 DinB family BCE_4660 PF00005 ABC transporter BCE_4661 PF00512 His Kinase A (phospho-acceptor) domain BCE_4661 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_4662 PF00072 Response regulator receiver domain BCE_4662 PF00486 Transcriptional regulatory protein, C terminal BCE_4664 PF09962 Uncharacterized conserved protein (DUF2196) BCE_4665 PF10672 S-adenosylmethionine-dependent methyltransferase BCE_4665 PF17785 PUA-like domain BCE_4666 PF03992 Antibiotic biosynthesis monooxygenase BCE_4667 PF04203 Sortase domain BCE_4668 PF00005 ABC transporter BCE_4669 PF01032 FecCD transport family BCE_4670 PF01497 Periplasmic binding protein BCE_4671 PF05031 Iron Transport-associated domain BCE_4672 PF05031 Iron Transport-associated domain BCE_4673 PF05525 Branched-chain amino acid transport protein BCE_4674 PF00849 RNA pseudouridylate synthase BCE_4674 PF01479 S4 domain BCE_4678 PF01713 Smr domain BCE_4678 PF00488 MutS domain V BCE_4679 PF14791 DNA polymerase beta thumb BCE_4679 PF14716 Helix-hairpin-helix domain BCE_4679 PF02811 PHP domain BCE_4680 PF02674 Colicin V production protein BCE_4681 PF05164 Cell division protein ZapA BCE_4682 PF11858 Domain of unknown function (DUF3378) BCE_4682 PF01351 Ribonuclease HII BCE_4685 PF01336 OB-fold nucleic acid binding domain BCE_4685 PF00152 tRNA synthetases class II (D, K and N) BCE_4686 PF03483 B3/4 domain BCE_4686 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BCE_4686 PF03484 tRNA synthetase B5 domain BCE_4686 PF01588 Putative tRNA binding domain BCE_4686 PF03147 Ferredoxin-fold anticodon binding domain BCE_4687 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BCE_4687 PF01409 tRNA synthetases class II core domain (F) BCE_4688 PF08032 RNA 2'-O ribose methyltransferase substrate binding BCE_4688 PF00588 SpoU rRNA Methylase family BCE_4689 PF14098 Small, acid-soluble spore protein I BCE_4690 PF01966 HD domain BCE_4691 PF03400 IS1 transposase BCE_4692 PF01966 HD domain BCE_4699 PF07690 Major Facilitator Superfamily BCE_4701 PF16859 Tetracyclin repressor-like, C-terminal domain BCE_4701 PF00440 Bacterial regulatory proteins, tetR family BCE_4702 PF05343 M42 glutamyl aminopeptidase BCE_4704 PF00453 Ribosomal protein L20 BCE_4705 PF01632 Ribosomal protein L35 BCE_4706 PF00707 Translation initiation factor IF-3, C-terminal domain BCE_4706 PF05198 Translation initiation factor IF-3, N-terminal domain BCE_4707 PF03129 Anticodon binding domain BCE_4707 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BCE_4707 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BCE_4707 PF02824 TGS domain BCE_4708 PF08812 YtxC-like family BCE_4709 PF07319 Primosomal protein DnaI N-terminus BCE_4709 PF01695 IstB-like ATP binding protein BCE_4710 PF07261 Replication initiation and membrane attachment BCE_4711 PF03477 ATP cone domain BCE_4712 PF02675 S-adenosylmethionine decarboxylase BCE_4714 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BCE_4714 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BCE_4715 PF01121 Dephospho-CoA kinase BCE_4716 PF02659 Putative manganese efflux pump BCE_4717 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BCE_4717 PF06827 Zinc finger found in FPG and IleRS BCE_4717 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BCE_4718 PF01367 5'-3' exonuclease, C-terminal SAM fold BCE_4718 PF00476 DNA polymerase family A BCE_4718 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BCE_4719 PF00989 PAS fold BCE_4719 PF00512 His Kinase A (phospho-acceptor) domain BCE_4719 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_4719 PF16736 Single Cache-like BCE_4720 PF00486 Transcriptional regulatory protein, C terminal BCE_4720 PF00072 Response regulator receiver domain BCE_4723 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BCE_4723 PF00056 lactate/malate dehydrogenase, NAD binding domain BCE_4724 PF00180 Isocitrate/isopropylmalate dehydrogenase BCE_4725 PF00285 Citrate synthase, C-terminal domain BCE_4726 PF04284 Protein of unknown function (DUF441) BCE_4727 PF01594 AI-2E family transporter BCE_4728 PF04186 FxsA cytoplasmic membrane protein BCE_4729 PF00224 Pyruvate kinase, barrel domain BCE_4729 PF00391 PEP-utilising enzyme, mobile domain BCE_4729 PF02887 Pyruvate kinase, alpha/beta domain BCE_4730 PF00365 Phosphofructokinase BCE_4731 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BCE_4732 PF17848 Acetyl-coA carboxylase zinc finger domain BCE_4732 PF01039 Carboxyl transferase domain BCE_4733 PF00392 Bacterial regulatory proteins, gntR family BCE_4734 PF03949 Malic enzyme, NAD binding domain BCE_4734 PF00390 Malic enzyme, N-terminal domain BCE_4735 PF07733 Bacterial DNA polymerase III alpha NTPase domain BCE_4735 PF02811 PHP domain BCE_4735 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BCE_4735 PF01336 OB-fold nucleic acid binding domain BCE_4735 PF14579 Helix-hairpin-helix motif BCE_4736 PF14034 Sporulation protein YtrH BCE_4738 PF02272 DHHA1 domain BCE_4738 PF01368 DHH family BCE_4740 PF14007 YtpI-like protein BCE_4742 PF01636 Phosphotransferase enzyme family BCE_4744 PF00571 CBS domain BCE_4744 PF07085 DRTGG domain BCE_4744 PF03061 Thioesterase superfamily BCE_4744 PF00392 Bacterial regulatory proteins, gntR family BCE_4748 PF00557 Metallopeptidase family M24 BCE_4748 PF01321 Creatinase/Prolidase N-terminal domain BCE_4755 PF07883 Cupin domain BCE_4758 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BCE_4758 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BCE_4760 PF00582 Universal stress protein family BCE_4764 PF00206 Lyase BCE_4764 PF14698 Argininosuccinate lyase C-terminal BCE_4765 PF00764 Arginosuccinate synthase BCE_4769 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BCE_4769 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BCE_4770 PF12787 EcsC protein family BCE_4773 PF00871 Acetokinase family BCE_4774 PF02384 N-6 DNA Methylase BCE_4775 PF08534 Redoxin BCE_4776 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BCE_4778 PF01513 ATP-NAD kinase BCE_4779 PF07969 Amidohydrolase family BCE_4781 PF13193 AMP-binding enzyme C-terminal domain BCE_4781 PF00501 AMP-binding enzyme BCE_4783 PF00269 Small, acid-soluble spore proteins, alpha/beta type BCE_4784 PF02568 Thiamine biosynthesis protein (ThiI) BCE_4784 PF02926 THUMP domain BCE_4785 PF00266 Aminotransferase class-V BCE_4786 PF06160 Septation ring formation regulator, EzrA BCE_4787 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCE_4787 PF03466 LysR substrate binding domain BCE_4788 PF00892 EamA-like transporter family BCE_4789 PF00440 Bacterial regulatory proteins, tetR family BCE_4790 PF13185 GAF domain BCE_4791 PF01053 Cys/Met metabolism PLP-dependent enzyme BCE_4793 PF00163 Ribosomal protein S4/S9 N-terminal domain BCE_4793 PF01479 S4 domain BCE_4796 PF00579 tRNA synthetases class I (W and Y) BCE_4796 PF01479 S4 domain BCE_4798 PF04542 Sigma-70 region 2 BCE_4798 PF08281 Sigma-70, region 4 BCE_4801 PF00501 AMP-binding enzyme BCE_4801 PF13193 AMP-binding enzyme C-terminal domain BCE_4802 PF00583 Acetyltransferase (GNAT) family BCE_4803 PF00571 CBS domain BCE_4804 PF00850 Histone deacetylase domain BCE_4807 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BCE_4808 PF01741 Large-conductance mechanosensitive channel, MscL BCE_4813 PF00356 Bacterial regulatory proteins, lacI family BCE_4816 PF07537 CamS sex pheromone cAM373 precursor BCE_4817 PF11009 Protein of unknown function (DUF2847) BCE_4820 PF02073 Thermophilic metalloprotease (M29) BCE_4825 PF13302 Acetyltransferase (GNAT) domain BCE_4826 PF00892 EamA-like transporter family BCE_4827 PF13411 MerR HTH family regulatory protein BCE_4828 PF03551 Transcriptional regulator PadR-like family BCE_4830 PF08245 Mur ligase middle domain BCE_4830 PF01225 Mur ligase family, catalytic domain BCE_4830 PF02875 Mur ligase family, glutamate ligase domain BCE_4832 PF17854 FtsK alpha domain BCE_4832 PF09397 Ftsk gamma domain BCE_4832 PF01580 FtsK/SpoIIIE family BCE_4834 PF01588 Putative tRNA binding domain BCE_4834 PF14794 Domain of unknown function (DUF4479) BCE_4835 PF07285 Protein of unknown function (DUF1444) BCE_4836 PF00085 Thioredoxin BCE_4837 PF01931 Protein of unknown function DUF84 BCE_4838 PF05343 M42 glutamyl aminopeptidase BCE_4840 PF00753 Metallo-beta-lactamase superfamily BCE_4841 PF02390 Putative methyltransferase BCE_4842 PF14165 YtzH-like protein BCE_4843 PF01636 Phosphotransferase enzyme family BCE_4844 PF00128 Alpha amylase, catalytic domain BCE_4844 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BCE_4844 PF17999 Pullulanase N1-terminal domain BCE_4845 PF02834 LigT like Phosphoesterase BCE_4846 PF01546 Peptidase family M20/M25/M40 BCE_4847 PF08220 DeoR-like helix-turn-helix domain BCE_4848 PF00849 RNA pseudouridylate synthase BCE_4848 PF01479 S4 domain BCE_4849 PF01943 Polysaccharide biosynthesis protein BCE_4849 PF14667 Polysaccharide biosynthesis C-terminal domain BCE_4851 PF07690 Major Facilitator Superfamily BCE_4852 PF01022 Bacterial regulatory protein, arsR family BCE_4853 PF08327 Activator of Hsp90 ATPase homolog 1-like protein BCE_4855 PF10957 Sporulation protein Cse60 BCE_4857 PF02559 CarD-like/TRCF domain BCE_4859 PF06800 Sugar transport protein BCE_4862 PF02391 MoaE protein BCE_4863 PF03205 Molybdopterin guanine dinucleotide synthesis protein B BCE_4864 PF03454 MoeA C-terminal region (domain IV) BCE_4864 PF00994 Probable molybdopterin binding domain BCE_4864 PF03453 MoeA N-terminal region (domain I and II) BCE_4865 PF01967 MoaC family BCE_4866 PF00899 ThiF family BCE_4867 PF06463 Molybdenum Cofactor Synthesis C BCE_4867 PF04055 Radical SAM superfamily BCE_4871 PF00581 Rhodanese-like domain BCE_4873 PF00561 alpha/beta hydrolase fold BCE_4874 PF03323 Bacillus/Clostridium GerA spore germination protein BCE_4875 PF03845 Spore germination protein BCE_4882 PF00133 tRNA synthetases class I (I, L, M and V) BCE_4882 PF13603 Leucyl-tRNA synthetase, Domain 2 BCE_4882 PF08264 Anticodon-binding domain of tRNA BCE_4882 PF09334 tRNA synthetases class I (M) BCE_4883 PF07690 Major Facilitator Superfamily BCE_4884 PF00999 Sodium/hydrogen exchanger family BCE_4885 PF02080 TrkA-C domain BCE_4886 PF00589 Phage integrase family BCE_4888 PF00005 ABC transporter BCE_4889 PF04235 Protein of unknown function (DUF418) BCE_4889 PF07786 Protein of unknown function (DUF1624) BCE_4891 PF10732 Protein of unknown function (DUF2524) BCE_4892 PF16199 Radical_SAM C-terminal domain BCE_4892 PF04055 Radical SAM superfamily BCE_4893 PF06962 Putative rRNA methylase BCE_4894 PF00005 ABC transporter BCE_4895 PF01177 Asp/Glu/Hydantoin racemase BCE_4898 PF03109 ABC1 family BCE_4900 PF01734 Patatin-like phospholipase BCE_4903 PF10776 Protein of unknown function (DUF2600) BCE_4904 PF12146 Serine aminopeptidase, S33 BCE_4905 PF00132 Bacterial transferase hexapeptide (six repeats) BCE_4906 PF01569 PAP2 superfamily BCE_4907 PF13439 Glycosyltransferase Family 4 BCE_4907 PF00534 Glycosyl transferases group 1 BCE_4908 PF12804 MobA-like NTP transferase domain BCE_4909 PF00994 Probable molybdopterin binding domain BCE_4913 PF13302 Acetyltransferase (GNAT) domain BCE_4914 PF02772 S-adenosylmethionine synthetase, central domain BCE_4914 PF02773 S-adenosylmethionine synthetase, C-terminal domain BCE_4914 PF00438 S-adenosylmethionine synthetase, N-terminal domain BCE_4916 PF01293 Phosphoenolpyruvate carboxykinase BCE_4922 PF01784 NIF3 (NGG1p interacting factor 3) BCE_4926 PF13426 PAS domain BCE_4926 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_4926 PF13188 PAS domain BCE_4926 PF00989 PAS fold BCE_4926 PF00512 His Kinase A (phospho-acceptor) domain BCE_4927 PF08447 PAS fold BCE_4927 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_4927 PF00989 PAS fold BCE_4927 PF00512 His Kinase A (phospho-acceptor) domain BCE_4929 PF08386 TAP-like protein BCE_4929 PF00561 alpha/beta hydrolase fold BCE_4930 PF00884 Sulfatase BCE_4936 PF00005 ABC transporter BCE_4937 PF00528 Binding-protein-dependent transport system inner membrane component BCE_4940 PF13419 Haloacid dehalogenase-like hydrolase BCE_4942 PF00293 NUDIX domain BCE_4946 PF02664 S-Ribosylhomocysteinase (LuxS) BCE_4947 PF01809 Putative membrane protein insertion efficiency factor BCE_4948 PF00484 Carbonic anhydrase BCE_4949 PF01654 Cytochrome bd terminal oxidase subunit I BCE_4950 PF02322 Cytochrome bd terminal oxidase subunit II BCE_4951 PF10676 Spore germination protein gerPA/gerPF BCE_4955 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BCE_4955 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BCE_4961 PF04012 PspA/IM30 family BCE_4965 PF07670 Nucleoside recognition BCE_4965 PF17910 FeoB cytosolic helical domain BCE_4965 PF02421 Ferrous iron transport protein B BCE_4965 PF07664 Ferrous iron transport protein B C terminus BCE_4967 PF09515 Thiamine transporter protein (Thia_YuaJ) BCE_4968 PF00512 His Kinase A (phospho-acceptor) domain BCE_4968 PF00672 HAMP domain BCE_4968 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_4969 PF00072 Response regulator receiver domain BCE_4969 PF00486 Transcriptional regulatory protein, C terminal BCE_4972 PF01520 N-acetylmuramoyl-L-alanine amidase BCE_4972 PF00395 S-layer homology domain BCE_4976 PF00781 Diacylglycerol kinase catalytic domain BCE_4982 PF09335 SNARE associated Golgi protein BCE_4983 PF00398 Ribosomal RNA adenine dimethylase BCE_4984 PF02687 FtsX-like permease family BCE_4985 PF00005 ABC transporter BCE_4986 PF06445 GyrI-like small molecule binding domain BCE_4986 PF12833 Helix-turn-helix domain BCE_4987 PF07853 Protein of unknown function (DUF1648) BCE_4987 PF13630 SdpI/YhfL protein family BCE_4988 PF01022 Bacterial regulatory protein, arsR family BCE_4989 PF00072 Response regulator receiver domain BCE_4989 PF00486 Transcriptional regulatory protein, C terminal BCE_4990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_4991 PF02687 FtsX-like permease family BCE_4992 PF02687 FtsX-like permease family BCE_4993 PF00005 ABC transporter BCE_4994 PF02687 FtsX-like permease family BCE_4996 PF00440 Bacterial regulatory proteins, tetR family BCE_4996 PF13977 BetI-type transcriptional repressor, C-terminal BCE_4998 PF02447 GntP family permease BCE_5001 PF07071 KDGP aldolase BCE_5002 PF03841 L-seryl-tRNA selenium transferase BCE_5003 PF01979 Amidohydrolase family BCE_5008 PF02557 D-alanyl-D-alanine carboxypeptidase BCE_5009 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_5009 PF00512 His Kinase A (phospho-acceptor) domain BCE_5010 PF00486 Transcriptional regulatory protein, C terminal BCE_5010 PF00072 Response regulator receiver domain BCE_5011 PF13378 Enolase C-terminal domain-like BCE_5011 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BCE_5012 PF00501 AMP-binding enzyme BCE_5012 PF13193 AMP-binding enzyme C-terminal domain BCE_5013 PF00378 Enoyl-CoA hydratase/isomerase BCE_5014 PF12697 Alpha/beta hydrolase family BCE_5015 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BCE_5015 PF16582 Middle domain of thiamine pyrophosphate BCE_5015 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BCE_5016 PF00425 chorismate binding enzyme BCE_5017 PF01040 UbiA prenyltransferase family BCE_5018 PF01258 Prokaryotic dksA/traR C4-type zinc finger BCE_5019 PF00313 'Cold-shock' DNA-binding domain BCE_5021 PF09278 MerR, DNA binding BCE_5021 PF00376 MerR family regulatory protein BCE_5024 PF00343 Carbohydrate phosphorylase BCE_5025 PF08323 Starch synthase catalytic domain BCE_5025 PF00534 Glycosyl transferases group 1 BCE_5026 PF00483 Nucleotidyl transferase BCE_5027 PF00483 Nucleotidyl transferase BCE_5028 PF02806 Alpha amylase, C-terminal all-beta domain BCE_5028 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BCE_5028 PF00128 Alpha amylase, catalytic domain BCE_5031 PF13860 FlgD Ig-like domain BCE_5031 PF05922 Peptidase inhibitor I9 BCE_5031 PF02225 PA domain BCE_5031 PF00082 Subtilase family BCE_5032 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BCE_5032 PF00056 lactate/malate dehydrogenase, NAD binding domain BCE_5034 PF02308 MgtC family BCE_5035 PF07885 Ion channel BCE_5035 PF02254 TrkA-N domain BCE_5036 PF08868 YugN-like family BCE_5037 PF00342 Phosphoglucose isomerase BCE_5038 PF04070 Domain of unknown function (DUF378) BCE_5039 PF00575 S1 RNA binding domain BCE_5040 PF00155 Aminotransferase class I and II BCE_5041 PF01037 Lrp/AsnC ligand binding domain BCE_5042 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BCE_5042 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BCE_5043 PF00561 alpha/beta hydrolase fold BCE_5043 PF08386 TAP-like protein BCE_5045 PF00155 Aminotransferase class I and II BCE_5048 PF08810 Kinase associated protein B BCE_5049 PF00929 Exonuclease BCE_5050 PF03600 Citrate transporter BCE_5053 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BCE_5053 PF03129 Anticodon binding domain BCE_5054 PF03061 Thioesterase superfamily BCE_5056 PF02632 BioY family BCE_5057 PF00483 Nucleotidyl transferase BCE_5058 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BCE_5058 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BCE_5058 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BCE_5058 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BCE_5059 PF10372 Bacterial membrane-spanning protein N-terminus BCE_5059 PF02457 DisA bacterial checkpoint controller nucleotide-binding BCE_5060 PF02789 Cytosol aminopeptidase family, N-terminal domain BCE_5060 PF00883 Cytosol aminopeptidase family, catalytic domain BCE_5061 PF06725 3D domain BCE_5063 PF13344 Haloacid dehalogenase-like hydrolase BCE_5063 PF00293 NUDIX domain BCE_5064 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCE_5065 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCE_5066 PF06445 GyrI-like small molecule binding domain BCE_5069 PF04463 Protein of unknown function (DUF523) BCE_5073 PF01521 Iron-sulphur cluster biosynthesis BCE_5074 PF01678 Diaminopimelate epimerase BCE_5075 PF07293 Protein of unknown function (DUF1450) BCE_5076 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCE_5078 PF09383 NIL domain BCE_5078 PF00005 ABC transporter BCE_5079 PF03649 Uncharacterised protein family (UPF0014) BCE_5080 PF03831 PhnA domain BCE_5080 PF08274 PhnA Zinc-Ribbon BCE_5085 PF07315 Protein of unknown function (DUF1462) BCE_5086 PF01106 NifU-like domain BCE_5089 PF04608 Phosphatidylglycerophosphatase A BCE_5093 PF11202 Phosphoribosyl transferase (PRTase) BCE_5093 PF15608 PELOTA RNA binding domain BCE_5095 PF02525 Flavodoxin-like fold BCE_5096 PF13344 Haloacid dehalogenase-like hydrolase BCE_5098 PF01934 Protein of unknown function DUF86 BCE_5099 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BCE_5102 PF06265 Protein of unknown function (DUF1027) BCE_5103 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BCE_5104 PF13411 MerR HTH family regulatory protein BCE_5104 PF07739 TipAS antibiotic-recognition domain BCE_5105 PF10086 YhfC intramembrane metalloprotease BCE_5109 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BCE_5109 PF04055 Radical SAM superfamily BCE_5110 PF01551 Peptidase family M23 BCE_5112 PF08827 Domain of unknown function (DUF1805) BCE_5113 PF02872 5'-nucleotidase, C-terminal domain BCE_5114 PF03551 Transcriptional regulator PadR-like family BCE_5115 PF04892 VanZ like family BCE_5116 PF01458 Uncharacterized protein family (UPF0051) BCE_5117 PF01592 NifU-like N terminal domain BCE_5118 PF00266 Aminotransferase class-V BCE_5119 PF01458 Uncharacterized protein family (UPF0051) BCE_5120 PF00005 ABC transporter BCE_5122 PF03180 NLPA lipoprotein BCE_5123 PF03180 NLPA lipoprotein BCE_5124 PF00528 Binding-protein-dependent transport system inner membrane component BCE_5125 PF00005 ABC transporter BCE_5125 PF09383 NIL domain BCE_5127 PF00085 Thioredoxin BCE_5128 PF01751 Toprim domain BCE_5130 PF01597 Glycine cleavage H-protein BCE_5131 PF03960 ArsC family BCE_5135 PF00056 lactate/malate dehydrogenase, NAD binding domain BCE_5135 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BCE_5140 PF13305 Tetracyclin repressor-like, C-terminal domain BCE_5140 PF00440 Bacterial regulatory proteins, tetR family BCE_5141 PF00753 Metallo-beta-lactamase superfamily BCE_5142 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BCE_5142 PF02770 Acyl-CoA dehydrogenase, middle domain BCE_5142 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BCE_5143 PF00108 Thiolase, N-terminal domain BCE_5143 PF02803 Thiolase, C-terminal domain BCE_5144 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BCE_5144 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BCE_5144 PF00378 Enoyl-CoA hydratase/isomerase BCE_5146 PF14115 YuzL-like protein BCE_5147 PF07943 Penicillin-binding protein 5, C-terminal domain BCE_5147 PF00768 D-alanyl-D-alanine carboxypeptidase BCE_5148 PF01619 Proline dehydrogenase BCE_5149 PF10835 Protein of unknown function (DUF2573) BCE_5150 PF01910 Thiamine-binding protein BCE_5151 PF00672 HAMP domain BCE_5151 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCE_5151 PF02743 Cache domain BCE_5156 PF07690 Major Facilitator Superfamily BCE_5157 PF13520 Amino acid permease BCE_5161 PF02096 60Kd inner membrane protein BCE_5163 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BCE_5163 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BCE_5170 PF09335 SNARE associated Golgi protein BCE_5172 PF03734 L,D-transpeptidase catalytic domain BCE_5172 PF17969 L,D-transpeptidase C-terminal domain BCE_5173 PF00486 Transcriptional regulatory protein, C terminal BCE_5173 PF00072 Response regulator receiver domain BCE_5174 PF00989 PAS fold BCE_5174 PF00512 His Kinase A (phospho-acceptor) domain BCE_5174 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_5174 PF16736 Single Cache-like BCE_5177 PF09334 tRNA synthetases class I (M) BCE_5177 PF08264 Anticodon-binding domain of tRNA BCE_5180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCE_5180 PF00672 HAMP domain BCE_5180 PF02743 Cache domain BCE_5181 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCE_5181 PF00672 HAMP domain BCE_5181 PF02743 Cache domain BCE_5182 PF01883 Iron-sulfur cluster assembly protein BCE_5183 PF02868 Thermolysin metallopeptidase, alpha-helical domain BCE_5183 PF07504 Fungalysin/Thermolysin Propeptide Motif BCE_5183 PF03413 Peptidase propeptide and YPEB domain BCE_5183 PF01447 Thermolysin metallopeptidase, catalytic domain BCE_5184 PF02678 Pirin BCE_5184 PF17954 Quercetinase C-terminal cupin domain BCE_5185 PF01047 MarR family BCE_5187 PF00999 Sodium/hydrogen exchanger family BCE_5188 PF02080 TrkA-C domain BCE_5190 PF01235 Sodium:alanine symporter family BCE_5191 PF00210 Ferritin-like domain BCE_5194 PF03641 Possible lysine decarboxylase BCE_5196 PF00210 Ferritin-like domain BCE_5198 PF01773 Na+ dependent nucleoside transporter N-terminus BCE_5198 PF07662 Na+ dependent nucleoside transporter C-terminus BCE_5199 PF01773 Na+ dependent nucleoside transporter N-terminus BCE_5199 PF07662 Na+ dependent nucleoside transporter C-terminus BCE_5200 PF01235 Sodium:alanine symporter family BCE_5201 PF01235 Sodium:alanine symporter family BCE_5202 PF13460 NAD(P)H-binding BCE_5206 PF00248 Aldo/keto reductase family BCE_5207 PF07690 Major Facilitator Superfamily BCE_5208 PF01638 HxlR-like helix-turn-helix BCE_5209 PF07849 Protein of unknown function (DUF1641) BCE_5210 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCE_5211 PF01479 S4 domain BCE_5211 PF00579 tRNA synthetases class I (W and Y) BCE_5212 PF01565 FAD binding domain BCE_5212 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BCE_5214 PF00672 HAMP domain BCE_5214 PF17202 Single cache domain 3 BCE_5214 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCE_5216 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BCE_5217 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BCE_5220 PF13302 Acetyltransferase (GNAT) domain BCE_5221 PF06146 Phosphate-starvation-inducible E BCE_5223 PF00005 ABC transporter BCE_5224 PF01032 FecCD transport family BCE_5225 PF01032 FecCD transport family BCE_5227 PF00072 Response regulator receiver domain BCE_5227 PF00486 Transcriptional regulatory protein, C terminal BCE_5231 PF01668 SmpB protein BCE_5232 PF17876 Cold shock domain BCE_5232 PF08206 Ribonuclease B OB domain BCE_5232 PF00773 RNB domain BCE_5232 PF00575 S1 RNA binding domain BCE_5233 PF12146 Serine aminopeptidase, S33 BCE_5234 PF03840 Preprotein translocase SecG subunit BCE_5235 PF04172 LrgB-like family BCE_5236 PF03788 LrgA family BCE_5237 PF01156 Inosine-uridine preferring nucleoside hydrolase BCE_5238 PF03952 Enolase, N-terminal domain BCE_5238 PF00113 Enolase, C-terminal TIM barrel domain BCE_5239 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BCE_5239 PF01676 Metalloenzyme superfamily BCE_5240 PF00121 Triosephosphate isomerase BCE_5241 PF00162 Phosphoglycerate kinase BCE_5242 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BCE_5242 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BCE_5243 PF04198 Putative sugar-binding domain BCE_5245 PF00309 Sigma-54 factor, Activator interacting domain (AID) BCE_5245 PF04552 Sigma-54, DNA binding domain BCE_5245 PF04963 Sigma-54 factor, core binding domain BCE_5246 PF06486 Protein of unknown function (DUF1093) BCE_5249 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BCE_5250 PF07451 Stage V sporulation protein AD (SpoVAD) BCE_5251 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BCE_5253 PF04239 Protein of unknown function (DUF421) BCE_5254 PF00574 Clp protease BCE_5256 PF00381 PTS HPr component phosphorylation site BCE_5257 PF10298 WhiA N-terminal LAGLIDADG-like domain BCE_5257 PF14527 WhiA LAGLIDADG-like domain BCE_5257 PF02650 WhiA C-terminal HTH domain BCE_5258 PF01933 Uncharacterised protein family UPF0052 BCE_5259 PF03668 P-loop ATPase protein family BCE_5260 PF00293 NUDIX domain BCE_5262 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCE_5264 PF14602 Hexapeptide repeat of succinyl-transferase BCE_5265 PF13419 Haloacid dehalogenase-like hydrolase BCE_5266 PF01790 Prolipoprotein diacylglyceryl transferase BCE_5267 PF07475 HPr Serine kinase C-terminal domain BCE_5267 PF02603 HPr Serine kinase N terminus BCE_5268 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV BCE_5271 PF00005 ABC transporter BCE_5271 PF17755 UvrA DNA-binding domain BCE_5271 PF17760 UvrA interaction domain BCE_5272 PF04851 Type III restriction enzyme, res subunit BCE_5272 PF02151 UvrB/uvrC motif BCE_5272 PF12344 Ultra-violet resistance protein B BCE_5272 PF17757 UvrB interaction domain BCE_5272 PF00271 Helicase conserved C-terminal domain BCE_5275 PF07739 TipAS antibiotic-recognition domain BCE_5275 PF13411 MerR HTH family regulatory protein BCE_5279 PF03601 Conserved hypothetical protein 698 BCE_5280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCE_5280 PF03466 LysR substrate binding domain BCE_5281 PF00376 MerR family regulatory protein BCE_5281 PF09278 MerR, DNA binding BCE_5282 PF03358 NADPH-dependent FMN reductase BCE_5283 PF12848 ABC transporter BCE_5283 PF00005 ABC transporter BCE_5283 PF16326 ABC transporter C-terminal domain BCE_5284 PF01906 Putative heavy-metal-binding BCE_5285 PF00664 ABC transporter transmembrane region BCE_5285 PF00005 ABC transporter BCE_5286 PF17820 PDZ domain BCE_5288 PF01471 Putative peptidoglycan binding domain BCE_5288 PF03572 Peptidase family S41 BCE_5288 PF17820 PDZ domain BCE_5289 PF02687 FtsX-like permease family BCE_5289 PF18075 FtsX extracellular domain BCE_5290 PF00005 ABC transporter BCE_5291 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BCE_5295 PF01043 SecA preprotein cross-linking domain BCE_5295 PF07517 SecA DEAD-like domain BCE_5295 PF02810 SEC-C motif BCE_5295 PF07516 SecA Wing and Scaffold domain BCE_5296 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus BCE_5296 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BCE_5298 PF00313 'Cold-shock' DNA-binding domain BCE_5300 PF04851 Type III restriction enzyme, res subunit BCE_5300 PF00271 Helicase conserved C-terminal domain BCE_5301 PF00877 NlpC/P60 family BCE_5301 PF01476 LysM domain BCE_5302 PF01638 HxlR-like helix-turn-helix BCE_5304 PF02645 Uncharacterised protein, DegV family COG1307 BCE_5305 PF01205 Uncharacterized protein family UPF0029 BCE_5305 PF09186 Domain of unknown function (DUF1949) BCE_5306 PF03816 Cell envelope-related transcriptional attenuator domain BCE_5307 PF02350 UDP-N-acetylglucosamine 2-epimerase BCE_5308 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BCE_5308 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BCE_5308 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BCE_5311 PF00953 Glycosyl transferase family 4 BCE_5313 PF03610 PTS system fructose IIA component BCE_5313 PF00158 Sigma-54 interaction domain BCE_5313 PF00874 PRD domain BCE_5314 PF03610 PTS system fructose IIA component BCE_5314 PF00874 PRD domain BCE_5314 PF00158 Sigma-54 interaction domain BCE_5316 PF02417 Chromate transporter BCE_5317 PF04794 YdjC-like protein BCE_5318 PF02056 Family 4 glycosyl hydrolase BCE_5318 PF11975 Family 4 glycosyl hydrolase C-terminal domain BCE_5319 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BCE_5320 PF02378 Phosphotransferase system, EIIC BCE_5321 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BCE_5324 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BCE_5325 PF02378 Phosphotransferase system, EIIC BCE_5326 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BCE_5327 PF00375 Sodium:dicarboxylate symporter family BCE_5329 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCE_5335 PF03466 LysR substrate binding domain BCE_5335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCE_5338 PF01654 Cytochrome bd terminal oxidase subunit I BCE_5339 PF02322 Cytochrome bd terminal oxidase subunit II BCE_5340 PF02040 Arsenical pump membrane protein BCE_5341 PF13667 ThiC-associated domain BCE_5341 PF01964 Radical SAM ThiC family BCE_5342 PF02652 L-lactate permease BCE_5345 PF09988 Uncharacterized metal-binding protein (DUF2227) BCE_5348 PF00884 Sulfatase BCE_5351 PF01063 Amino-transferase class IV BCE_5353 PF01476 LysM domain BCE_5353 PF00877 NlpC/P60 family BCE_5354 PF07662 Na+ dependent nucleoside transporter C-terminus BCE_5354 PF01773 Na+ dependent nucleoside transporter N-terminus BCE_5358 PF02028 BCCT, betaine/carnitine/choline family transporter BCE_5360 PF01476 LysM domain BCE_5360 PF06725 3D domain BCE_5363 PF04434 SWIM zinc finger BCE_5364 PF00271 Helicase conserved C-terminal domain BCE_5364 PF00176 SNF2 family N-terminal domain BCE_5364 PF12419 SNF2 Helicase protein BCE_5370 PF04545 Sigma-70, region 4 BCE_5370 PF04542 Sigma-70 region 2 BCE_5372 PF12704 MacB-like periplasmic core domain BCE_5372 PF02687 FtsX-like permease family BCE_5373 PF00005 ABC transporter BCE_5375 PF07690 Major Facilitator Superfamily BCE_5378 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_5378 PF00512 His Kinase A (phospho-acceptor) domain BCE_5378 PF00672 HAMP domain BCE_5379 PF00486 Transcriptional regulatory protein, C terminal BCE_5379 PF00072 Response regulator receiver domain BCE_5380 PF16363 GDP-mannose 4,6 dehydratase BCE_5381 PF16363 GDP-mannose 4,6 dehydratase BCE_5384 PF01370 NAD dependent epimerase/dehydratase family BCE_5385 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BCE_5385 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BCE_5385 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BCE_5387 PF01501 Glycosyl transferase family 8 BCE_5387 PF00535 Glycosyl transferase family 2 BCE_5390 PF13439 Glycosyltransferase Family 4 BCE_5390 PF00534 Glycosyl transferases group 1 BCE_5392 PF00535 Glycosyl transferase family 2 BCE_5393 PF02397 Bacterial sugar transferase BCE_5394 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BCE_5395 PF02719 Polysaccharide biosynthesis protein BCE_5396 PF00483 Nucleotidyl transferase BCE_5398 PF13614 AAA domain BCE_5399 PF13807 G-rich domain on putative tyrosine kinase BCE_5399 PF02706 Chain length determinant protein BCE_5400 PF13614 AAA domain BCE_5401 PF07977 FabA-like domain BCE_5405 PF12116 Stage III sporulation protein D BCE_5407 PF01551 Peptidase family M23 BCE_5409 PF00005 ABC transporter BCE_5410 PF00072 Response regulator receiver domain BCE_5410 PF04397 LytTr DNA-binding domain BCE_5411 PF08486 Stage II sporulation protein BCE_5412 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BCE_5413 PF08680 TATA-box binding BCE_5414 PF06612 Protein of unknown function (DUF1146) BCE_5415 PF00361 Proton-conducting membrane transporter BCE_5416 PF00361 Proton-conducting membrane transporter BCE_5417 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BCE_5417 PF00361 Proton-conducting membrane transporter BCE_5417 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus BCE_5418 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BCE_5419 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BCE_5421 PF00146 NADH dehydrogenase BCE_5422 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BCE_5423 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BCE_5424 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BCE_5425 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BCE_5426 PF00990 Diguanylate cyclase, GGDEF domain BCE_5426 PF03707 Bacterial signalling protein N terminal repeat BCE_5426 PF00563 EAL domain BCE_5429 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BCE_5429 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BCE_5430 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BCE_5430 PF02874 ATP synthase alpha/beta family, beta-barrel domain BCE_5431 PF00231 ATP synthase BCE_5432 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BCE_5432 PF00306 ATP synthase alpha/beta chain, C terminal domain BCE_5432 PF02874 ATP synthase alpha/beta family, beta-barrel domain BCE_5433 PF00213 ATP synthase delta (OSCP) subunit BCE_5434 PF00430 ATP synthase B/B' CF(0) BCE_5435 PF00137 ATP synthase subunit C BCE_5436 PF00119 ATP synthase A chain BCE_5437 PF03899 ATP synthase I chain BCE_5441 PF00464 Serine hydroxymethyltransferase BCE_5442 PF04260 Protein of unknown function (DUF436) BCE_5443 PF02502 Ribose/Galactose Isomerase BCE_5444 PF01451 Low molecular weight phosphotyrosine protein phosphatase BCE_5445 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BCE_5446 PF07681 DoxX BCE_5447 PF01613 Flavin reductase like domain BCE_5451 PF02659 Putative manganese efflux pump BCE_5452 PF03481 Putative GTP-binding controlling metal-binding BCE_5452 PF01300 Telomere recombination BCE_5454 PF09551 Stage II sporulation protein R (spore_II_R) BCE_5455 PF17827 PrmC N-terminal domain BCE_5455 PF13847 Methyltransferase domain BCE_5456 PF00472 RF-1 domain BCE_5456 PF03462 PCRF domain BCE_5457 PF00265 Thymidine kinase BCE_5458 PF01197 Ribosomal protein L31 BCE_5460 PF07497 Rho termination factor, RNA-binding domain BCE_5460 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BCE_5460 PF07498 Rho termination factor, N-terminal domain BCE_5462 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BCE_5463 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BCE_5465 PF01116 Fructose-bisphosphate aldolase class-II BCE_5466 PF00072 Response regulator receiver domain BCE_5467 PF10740 Domain of unknown function (DUF2529) BCE_5468 PF06418 CTP synthase N-terminus BCE_5468 PF00117 Glutamine amidotransferase class-I BCE_5470 PF05066 HB1, ASXL, restriction endonuclease HTH domain BCE_5472 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BCE_5472 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BCE_5472 PF02770 Acyl-CoA dehydrogenase, middle domain BCE_5473 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BCE_5473 PF02770 Acyl-CoA dehydrogenase, middle domain BCE_5473 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BCE_5474 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BCE_5474 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BCE_5475 PF02803 Thiolase, C-terminal domain BCE_5475 PF00108 Thiolase, N-terminal domain BCE_5476 PF02754 Cysteine-rich domain BCE_5476 PF13183 4Fe-4S dicluster domain BCE_5477 PF13091 PLD-like domain BCE_5478 PF03851 UV-endonuclease UvdE BCE_5479 PF00563 EAL domain BCE_5479 PF00990 Diguanylate cyclase, GGDEF domain BCE_5479 PF03707 Bacterial signalling protein N terminal repeat BCE_5482 PF00072 Response regulator receiver domain BCE_5482 PF00196 Bacterial regulatory proteins, luxR family BCE_5483 PF07730 Histidine kinase BCE_5483 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_5485 PF00005 ABC transporter BCE_5486 PF00557 Metallopeptidase family M24 BCE_5488 PF04389 Peptidase family M28 BCE_5488 PF02225 PA domain BCE_5492 PF08281 Sigma-70, region 4 BCE_5492 PF04542 Sigma-70 region 2 BCE_5493 PF00750 tRNA synthetases class I (R) BCE_5493 PF05746 DALR anticodon binding domain BCE_5493 PF03485 Arginyl tRNA synthetase N terminal domain BCE_5494 PF09148 Domain of unknown function (DUF1934) BCE_5495 PF02016 LD-carboxypeptidase N-terminal domain BCE_5495 PF17676 LD-carboxypeptidase C-terminal domain BCE_5498 PF00491 Arginase family BCE_5500 PF17284 Spermidine synthase tetramerisation domain BCE_5501 PF07690 Major Facilitator Superfamily BCE_5502 PF13411 MerR HTH family regulatory protein BCE_5503 PF03009 Glycerophosphoryl diester phosphodiesterase family BCE_5504 PF00912 Transglycosylase BCE_5504 PF00905 Penicillin binding protein transpeptidase domain BCE_5505 PF08741 YwhD family BCE_5506 PF02163 Peptidase family M50 BCE_5507 PF01361 Tautomerase enzyme BCE_5508 PF01966 HD domain BCE_5509 PF01497 Periplasmic binding protein BCE_5510 PF00005 ABC transporter BCE_5511 PF01032 FecCD transport family BCE_5512 PF01032 FecCD transport family BCE_5513 PF07293 Protein of unknown function (DUF1450) BCE_5515 PF03099 Biotin/lipoate A/B protein ligase family BCE_5516 PF01515 Phosphate acetyl/butaryl transferase BCE_5518 PF00768 D-alanyl-D-alanine carboxypeptidase BCE_5518 PF07943 Penicillin-binding protein 5, C-terminal domain BCE_5519 PF07486 Cell Wall Hydrolase BCE_5520 PF09671 Spore coat protein (Spore_GerQ) BCE_5521 PF04241 Protein of unknown function (DUF423) BCE_5523 PF02080 TrkA-C domain BCE_5524 PF00860 Permease family BCE_5526 PF12823 Domain of unknown function (DUF3817) BCE_5527 PF03167 Uracil DNA glycosylase superfamily BCE_5528 PF12679 ABC-2 family transporter protein BCE_5529 PF00005 ABC transporter BCE_5530 PF13472 GDSL-like Lipase/Acylhydrolase family BCE_5531 PF00356 Bacterial regulatory proteins, lacI family BCE_5531 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BCE_5533 PF03447 Homoserine dehydrogenase, NAD binding domain BCE_5533 PF00742 Homoserine dehydrogenase BCE_5533 PF01842 ACT domain BCE_5534 PF04204 Homoserine O-succinyltransferase BCE_5535 PF01053 Cys/Met metabolism PLP-dependent enzyme BCE_5537 PF13419 Haloacid dehalogenase-like hydrolase BCE_5538 PF00027 Cyclic nucleotide-binding domain BCE_5539 PF02525 Flavodoxin-like fold BCE_5540 PF00072 Response regulator receiver domain BCE_5540 PF00196 Bacterial regulatory proteins, luxR family BCE_5541 PF13185 GAF domain BCE_5541 PF07730 Histidine kinase BCE_5542 PF08543 Phosphomethylpyrimidine kinase BCE_5543 PF00990 Diguanylate cyclase, GGDEF domain BCE_5543 PF07694 5TMR of 5TMR-LYT BCE_5544 PF04328 Selenoprotein, putative BCE_5545 PF02554 Carbon starvation protein CstA BCE_5545 PF13722 5TM C-terminal transporter carbon starvation CstA BCE_5546 PF00072 Response regulator receiver domain BCE_5546 PF04397 LytTr DNA-binding domain BCE_5547 PF07690 Major Facilitator Superfamily BCE_5548 PF03808 Glycosyl transferase WecB/TagA/CpsF family BCE_5549 PF00534 Glycosyl transferases group 1 BCE_5549 PF13439 Glycosyltransferase Family 4 BCE_5551 PF03458 UPF0126 domain BCE_5552 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCE_5554 PF03061 Thioesterase superfamily BCE_5556 PF01609 Transposase DDE domain BCE_5557 PF00535 Glycosyl transferase family 2 BCE_5561 PF00535 Glycosyl transferase family 2 BCE_5564 PF12848 ABC transporter BCE_5564 PF00005 ABC transporter BCE_5565 PF03062 MBOAT, membrane-bound O-acyltransferase family BCE_5567 PF00440 Bacterial regulatory proteins, tetR family BCE_5568 PF00873 AcrB/AcrD/AcrF family BCE_5569 PF01641 SelR domain BCE_5569 PF01625 Peptide methionine sulfoxide reductase BCE_5570 PF01594 AI-2E family transporter BCE_5571 PF04172 LrgB-like family BCE_5572 PF03788 LrgA family BCE_5573 PF04397 LytTr DNA-binding domain BCE_5573 PF00072 Response regulator receiver domain BCE_5574 PF13492 GAF domain BCE_5574 PF07694 5TMR of 5TMR-LYT BCE_5574 PF06580 Histidine kinase BCE_5574 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_5576 PF07690 Major Facilitator Superfamily BCE_5577 PF02028 BCCT, betaine/carnitine/choline family transporter BCE_5578 PF02898 Nitric oxide synthase, oxygenase domain BCE_5579 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BCE_5579 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BCE_5581 PF02293 AmiS/UreI family transporter BCE_5588 PF16363 GDP-mannose 4,6 dehydratase BCE_5590 PF03006 Haemolysin-III related BCE_5592 PF00270 DEAD/DEAH box helicase BCE_5592 PF03880 DbpA RNA binding domain BCE_5592 PF00271 Helicase conserved C-terminal domain BCE_5594 PF00478 IMP dehydrogenase / GMP reductase domain BCE_5596 PF01432 Peptidase family M3 BCE_5596 PF08439 Oligopeptidase F BCE_5598 PF00239 Resolvase, N terminal domain BCE_5598 PF13408 Recombinase zinc beta ribbon domain BCE_5598 PF07508 Recombinase BCE_5608 PF02590 Predicted SPOUT methyltransferase BCE_5610 PF13180 PDZ domain BCE_5611 PF00753 Metallo-beta-lactamase superfamily BCE_5612 PF09648 YycH protein BCE_5613 PF07435 YycH protein BCE_5614 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_5614 PF13426 PAS domain BCE_5614 PF00672 HAMP domain BCE_5614 PF00512 His Kinase A (phospho-acceptor) domain BCE_5615 PF00072 Response regulator receiver domain BCE_5615 PF00486 Transcriptional regulatory protein, C terminal BCE_5617 PF00709 Adenylosuccinate synthetase BCE_5618 PF03796 DnaB-like helicase C terminal domain BCE_5618 PF00772 DnaB-like helicase N terminal domain BCE_5619 PF03796 DnaB-like helicase C terminal domain BCE_5619 PF00772 DnaB-like helicase N terminal domain BCE_5620 PF03948 Ribosomal protein L9, C-terminal domain BCE_5620 PF01281 Ribosomal protein L9, N-terminal domain BCE_5621 PF01368 DHH family BCE_5621 PF02272 DHHA1 domain BCE_5622 PF09991 Predicted membrane protein (DUF2232) BCE_5623 PF01084 Ribosomal protein S18 BCE_5624 PF00436 Single-strand binding protein family BCE_5625 PF01250 Ribosomal protein S6 BCE_5626 PF06071 Protein of unknown function (DUF933) BCE_5626 PF01926 50S ribosome-binding GTPase BCE_5627 PF06107 Bacterial protein of unknown function (DUF951) BCE_5628 PF00924 Mechanosensitive ion channel BCE_5629 PF06866 Protein of unknown function (DUF1256) BCE_5630 PF17762 HTH domain found in ParB protein BCE_5630 PF02195 ParB-like nuclease domain BCE_5631 PF13614 AAA domain BCE_5632 PF02195 ParB-like nuclease domain BCE_5632 PF17762 HTH domain found in ParB protein BCE_5633 PF02527 rRNA small subunit methyltransferase G BCE_5634 PF01134 Glucose inhibited division protein A BCE_5634 PF13932 GidA associated domain BCE_5635 PF10396 GTP-binding protein TrmE N-terminus BCE_5635 PF12631 MnmE helical domain BCE_5635 PF01926 50S ribosome-binding GTPase BCE_5636 PF14804 Jag N-terminus BCE_5636 PF01424 R3H domain BCE_5637 PF02096 60Kd inner membrane protein BCE_5638 PF00825 Ribonuclease P BCE_5639 PF00468 Ribosomal protein L34 BCE_A0001 PF02899 Phage integrase, N-terminal SAM-like domain BCE_A0001 PF00589 Phage integrase family BCE_A0015 PF04235 Protein of unknown function (DUF418) BCE_A0020 PF10087 Uncharacterized protein conserved in bacteria (DUF2325) BCE_A0034 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BCE_A0034 PF01348 Type II intron maturase BCE_A0056 PF13333 Integrase core domain BCE_A0056 PF00665 Integrase core domain BCE_A0056 PF13276 HTH-like domain BCE_A0067 PF01385 Probable transposase BCE_A0067 PF12323 Helix-turn-helix domain BCE_A0067 PF07282 Putative transposase DNA-binding domain BCE_A0073 PF09397 Ftsk gamma domain BCE_A0073 PF17854 FtsK alpha domain BCE_A0073 PF01580 FtsK/SpoIIIE family BCE_A0074 PF01609 Transposase DDE domain BCE_A0075 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BCE_A0089 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BCE_A0089 PF01348 Type II intron maturase BCE_A0120 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BCE_A0131 PF08378 Nuclease-related domain BCE_A0140 PF01751 Toprim domain BCE_A0140 PF13342 C-terminal repeat of topoisomerase BCE_A0140 PF01131 DNA topoisomerase BCE_A0141 PF00565 Staphylococcal nuclease homologue BCE_A0144 PF02600 Disulfide bond formation protein DsbB BCE_A0145 PF01022 Bacterial regulatory protein, arsR family BCE_A0146 PF17209 Hfq protein BCE_A0148 PF18801 response regulator aspartate phosphatase H, N terminal BCE_A0151 PF00589 Phage integrase family BCE_A0151 PF13495 Phage integrase, N-terminal SAM-like domain BCE_A0156 PF02374 Anion-transporting ATPase BCE_A0157 PF06953 Arsenical resistance operon trans-acting repressor ArsD BCE_A0158 PF01451 Low molecular weight phosphotyrosine protein phosphatase BCE_A0159 PF01758 Sodium Bile acid symporter family BCE_A0160 PF01022 Bacterial regulatory protein, arsR family BCE_A0165 PF00230 Major intrinsic protein BCE_A0167 PF01381 Helix-turn-helix BCE_A0168 PF01384 Phosphate transporter family BCE_A0169 PF01022 Bacterial regulatory protein, arsR family BCE_A0170 PF02655 ATP-grasp domain BCE_A0170 PF00206 Lyase BCE_A0172 PF01047 MarR family BCE_A0181 PF00403 Heavy-metal-associated domain BCE_A0182 PF00403 Heavy-metal-associated domain BCE_A0183 PF02583 Metal-sensitive transcriptional repressor BCE_A0184 PF01297 Zinc-uptake complex component A periplasmic BCE_A0184 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment BCE_A0190 PF00578 AhpC/TSA family BCE_A0191 PF01790 Prolipoprotein diacylglyceryl transferase BCE_A0205 PF00085 Thioredoxin BCE_A0210 PF00005 ABC transporter BCE_A0211 PF00264 Common central domain of tyrosinase BCE_A0212 PF00394 Multicopper oxidase BCE_A0212 PF07731 Multicopper oxidase BCE_A0212 PF07732 Multicopper oxidase BCE_A0213 PF00072 Response regulator receiver domain BCE_A0213 PF00486 Transcriptional regulatory protein, C terminal BCE_A0214 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCE_A0214 PF00512 His Kinase A (phospho-acceptor) domain BCE_A0214 PF00989 PAS fold BCE_A0214 PF16736 Single Cache-like BCE_A0218 PF07454 Stage II sporulation protein P (SpoIIP) BCE_A0221 PF01022 Bacterial regulatory protein, arsR family BCE_A0226 PF14436 Bacterial EndoU nuclease BCE_A0226 PF04740 LXG domain of WXG superfamily BCE_A0232 PF02899 Phage integrase, N-terminal SAM-like domain BCE_A0232 PF00589 Phage integrase family BCE_A0235 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BCE_A0235 PF18277 AbrB C-terminal domain BCE_A0241 PF11798 IMS family HHH motif BCE_A0241 PF11799 impB/mucB/samB family C-terminal domain BCE_A0241 PF00817 impB/mucB/samB family BCE_A0242 PF00589 Phage integrase family BCE_A0242 PF02899 Phage integrase, N-terminal SAM-like domain