locus-tag	class	description
BCE_0002	COG0592	DNA-directed DNA polymerase activity
BCE_0003	COG2501	S4 domain
BCE_0005	COG0187	DNA topoisomerase II activity
BCE_0006	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BCE_0009	COG0517	IMP dehydrogenase activity
BCE_0009	COG0516	GMP reductase activity
BCE_0010	COG1686	Belongs to the peptidase S11 family
BCE_0015	COG1428	Deoxynucleoside kinase
BCE_0016	COG1428	Deoxynucleoside kinase
BCE_0017	COG1335	isochorismatase
BCE_0019	COG0590	tRNA wobble adenosine to inosine editing
BCE_0020	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
BCE_0027	COG1982	Orn Lys Arg decarboxylase major
BCE_0029	COG0470	DNA polymerase III
BCE_0030	COG1774	PSP1 C-terminal conserved region
BCE_0032	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
BCE_0034	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
BCE_0035	COG2002	toxin-antitoxin pair type II binding
BCE_0036	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BCE_0036	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BCE_0037	COG0084	hydrolase, TatD family'
BCE_0038	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
BCE_0041	COG4466	Protein conserved in bacteria
BCE_0044	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
BCE_0045	COG0251	oxidation-reduction process
BCE_0048	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BCE_0051	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
BCE_0052	COG2002	toxin-antitoxin pair type II binding
BCE_0053	COG2244	polysaccharide biosynthetic process
BCE_0054	COG3956	TIGRFAM MazG family protein
BCE_0055	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
BCE_0059	COG1098	S1 RNA binding domain
BCE_0060	COG2208	phosphoserine phosphatase activity
BCE_0063	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BCE_0066	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
BCE_0067	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
BCE_0068	COG0512	Glutamine amidotransferase of anthranilate synthase
BCE_0069	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BCE_0070	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
BCE_0071	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
BCE_0072	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
BCE_0073	COG1396	sequence-specific DNA binding
BCE_0074	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BCE_0079	COG3880	PFAM UvrB UvrC protein
BCE_0081	COG0542	response to heat
BCE_0082	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
BCE_0084	COG4956	integral membrane protein (PIN domain superfamily)
BCE_0088	COG1045	serine acetyltransferase
BCE_0091	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BCE_0092	COG3688	RNA-binding protein containing a PIN domain
BCE_0094	COG0267	Belongs to the bacterial ribosomal protein bL33 family
BCE_0095	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BCE_0096	COG0250	Participates in transcription elongation, termination and antitermination
BCE_0101	COG2813	Specifically methylates the guanine in position
BCE_0104	COG1358	cellular component organization or biogenesis
BCE_0125	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
BCE_0130	COG0201	protein transport
BCE_0132	COG0024	Methionine aminopeptidase
BCE_0134	COG0257	Belongs to the bacterial ribosomal protein bL36 family
BCE_0141	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BCE_0146	COG0860	N-Acetylmuramoyl-L-alanine amidase
BCE_0147	COG0489	protein tyrosine kinase activity
BCE_0149	COG2194	sulfuric ester hydrolase activity
BCE_0150	COG0726	polysaccharide deacetylase
BCE_0155	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
BCE_0156	COG4856	YbbR-like protein
BCE_0194	COG1028	Short-chain dehydrogenase reductase Sdr
BCE_0195	COG2011	ABC-type metal ion transport system permease component
BCE_0197	COG1464	Belongs to the NlpA lipoprotein family
BCE_0198	COG1063	alcohol dehydrogenase
BCE_0199	COG0277	FAD linked oxidase domain protein
BCE_0200	COG2271	Major facilitator Superfamily
BCE_0202	COG2814	Major facilitator Superfamily
BCE_0205	COG0601	transmembrane transport
BCE_0206	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BCE_0207	COG0444	Belongs to the ABC transporter superfamily
BCE_0208	COG4608	Belongs to the ABC transporter superfamily
BCE_0209	COG4166	transmembrane transport
BCE_0211	COG2207	Transcriptional regulator
BCE_0212	COG1309	transcriptional regulator
BCE_0214	COG4166	transmembrane transport
BCE_0215	COG4166	transmembrane transport
BCE_0216	COG0656	L-ascorbic acid biosynthetic process
BCE_0221	COG4149	molybdate abc transporter
BCE_0222	COG0725	ABC transporter, periplasmic molybdate-binding protein
BCE_0223	COG1910	domain protein
BCE_0227	COG0697	spore germination
BCE_0230	COG0204	Acyl-transferase
BCE_0232	COG1609	Transcriptional regulator
BCE_0234	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BCE_0237	COG0084	hydrolase, TatD family'
BCE_0239	COG5298	Protein conserved in bacteria
BCE_0245	COG0488	(ABC) transporter
BCE_0247	COG0747	negative chemotaxis
BCE_0248	COG0747	negative chemotaxis
BCE_0249	COG0601	transmembrane transport
BCE_0251	COG0444	Belongs to the ABC transporter superfamily
BCE_0252	COG4608	Belongs to the ABC transporter superfamily
BCE_0253	COG0561	phosphatase activity
BCE_0260	COG3185	4-Hydroxyphenylpyruvate dioxygenase
BCE_0261	COG0179	Fumarylacetoacetate (FAA) hydrolase
BCE_0263	COG0531	amino acid
BCE_0264	COG2814	Major facilitator Superfamily
BCE_0266	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
BCE_0268	COG4294	response to UV
BCE_0269	COG0705	Rhomboid family
BCE_0271	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
BCE_0272	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BCE_0273	COG0864	Transcriptional regulator
BCE_0274	COG2337	Toxic component of a toxin-antitoxin (TA) module
BCE_0275	COG2183	response to ionizing radiation
BCE_0278	COG0802	atpase or kinase
BCE_0279	COG0802	atpase or kinase
BCE_0280	COG1214	PFAM Peptidase M22, glycoprotease
BCE_0281	COG0456	acetyltransferase
BCE_0284	COG0488	(ABC) transporter
BCE_0287	COG1266	CAAX protease self-immunity
BCE_0293	COG2252	PERMEase
BCE_0295	COG5002	protein histidine kinase activity
BCE_0301	COG2226	methyltransferase
BCE_0305	COG1215	transferase activity, transferring glycosyl groups
BCE_0309	COG0583	DNA-binding transcription factor activity
BCE_0314	COG0697	spore germination
BCE_0317	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
BCE_0318	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
BCE_0319	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
BCE_0321	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BCE_0324	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
BCE_0326	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
BCE_0328	COG0151	Belongs to the GarS family
BCE_0334	COG0210	DNA helicase
BCE_0336	COG4851	CamS sex pheromone cAM373 precursor
BCE_0340	COG1335	isochorismatase
BCE_0342	COG2011	ABC-type metal ion transport system permease component
BCE_0346	COG0003	Pfam Anion-transporting ATPase
BCE_0347	COG1846	Transcriptional regulator
BCE_0348	COG4682	membrane
BCE_0352	COG1597	lipid kinase activity
BCE_0353	COG0546	phosphoglycolate phosphatase activity
BCE_0354	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BCE_0356	COG1012	belongs to the aldehyde dehydrogenase family
BCE_0357	COG2076	Multidrug Resistance protein
BCE_0359	COG2309	aminopeptidase activity
BCE_0362	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BCE_0377	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BCE_0377	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BCE_0378	COG3226	Transcriptional regulator
BCE_0382	COG3561	AntA/AntB antirepressor
BCE_0397	COG4626	Terminase
BCE_0397	COG1802	Transcriptional regulator
BCE_0398	COG4695	Portal protein
BCE_0399	COG0740	serine-type endopeptidase activity
BCE_0414	COG4824	toxin secretion phage lysis holin
BCE_0419	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
BCE_0420	COG0789	Transcriptional regulator
BCE_0421	COG5504	Zn-dependent protease
BCE_0426	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BCE_0427	COG5002	protein histidine kinase activity
BCE_0430	COG4807	Protein conserved in bacteria
BCE_0436	COG1473	amidohydrolase
BCE_0440	COG0450	alkyl hydroperoxide reductase
BCE_0444	COG0235	Class ii aldolase
BCE_0449	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BCE_0450	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BCE_0451	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BCE_0454	COG0166	Belongs to the GPI family
BCE_0463	COG3541	Predicted nucleotidyltransferase
BCE_0464	COG2814	Major facilitator Superfamily
BCE_0465	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BCE_0465	COG0723	plastoquinol--plastocyanin reductase activity
BCE_0467	COG0765	amino acid transport
BCE_0468	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BCE_0470	COG0840	transmembrane signaling receptor activity
BCE_0475	COG0549	Belongs to the carbamate kinase family
BCE_0479	COG0277	FAD linked oxidase domain protein
BCE_0480	COG0277	FAD linked oxidase domain protein
BCE_0481	COG0366	Alpha amylase catalytic
BCE_0482	COG1263	PTS System
BCE_0482	COG2190	(PTS) system
BCE_0482	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BCE_0488	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
BCE_0491	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BCE_0493	COG1116	anion transmembrane transporter activity
BCE_0495	COG0488	(ABC) transporter
BCE_0507	COG2270	Major facilitator Superfamily
BCE_0513	COG2310	stress, protein
BCE_0514	COG2310	stress, protein
BCE_0515	COG2310	stress, protein
BCE_0516	COG0861	Integral membrane protein TerC family
BCE_0518	COG3853	Toxic anion resistance protein (TelA)
BCE_0521	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BCE_0523	COG1295	ribonuclease BN
BCE_0524	COG2217	Heavy metal translocating P-type atpase
BCE_0525	COG0697	spore germination
BCE_0528	COG0681	Belongs to the peptidase S26 family
BCE_0530	COG0586	Pfam SNARE associated Golgi protein
BCE_0533	COG3871	stress protein (general stress protein 26)
BCE_0535	COG0387	Pfam Sodium calcium exchanger
BCE_0537	COG0535	radical SAM domain protein
BCE_0541	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
BCE_0545	COG3829	transcription factor binding
BCE_0547	COG0833	amino acid
BCE_0548	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BCE_0553	COG2066	Belongs to the glutaminase family
BCE_0554	COG1263	PTS System
BCE_0554	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BCE_0555	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BCE_0559	COG0463	Glycosyl transferase, family 2
BCE_0561	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
BCE_0561	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BCE_0564	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BCE_0569	COG0402	S-adenosylhomocysteine deaminase activity
BCE_0570	COG1090	epimerase
BCE_0576	COG1988	membrane-bound metal-dependent
BCE_0577	COG1194	a g-specific adenine glycosylase
BCE_0583	COG1132	(ABC) transporter
BCE_0584	COG4129	membrane
BCE_0585	COG0067	glutamate synthase
BCE_0585	COG0070	glutamate synthase
BCE_0585	COG0069	glutamate synthase activity
BCE_0587	COG4555	ABC transporter
BCE_0591	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
BCE_0592	COG0735	belongs to the Fur family
BCE_0597	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
BCE_0598	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
BCE_0600	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
BCE_0602	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
BCE_0605	COG2766	serine protein kinase
BCE_0609	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BCE_0610	COG1126	abc transporter atp-binding protein
BCE_0611	COG0765	amino acid transport
BCE_0614	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BCE_0617	COG1585	Membrane protein implicated in regulation of membrane protease activity
BCE_0618	COG2268	Band 7 protein
BCE_0620	COG3290	protein histidine kinase activity
BCE_0621	COG4565	transcriptional regulatory protein
BCE_0622	COG2851	Citrate transporter
BCE_0628	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
BCE_0629	COG3842	ATPase activity
BCE_0630	COG1175	transmembrane transport
BCE_0631	COG0395	ABC-type sugar transport system, permease component
BCE_0633	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
BCE_0634	COG0745	RESPONSE REGULATOR receiver
BCE_0635	COG5002	protein histidine kinase activity
BCE_0637	COG4990	cell redox homeostasis
BCE_0639	COG3290	protein histidine kinase activity
BCE_0640	COG4565	transcriptional regulatory protein
BCE_0641	COG3493	citrate carrier protein
BCE_0642	COG0281	malic enzyme
BCE_0645	COG0697	spore germination
BCE_0646	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BCE_0649	COG5002	protein histidine kinase activity
BCE_0650	COG0745	RESPONSE REGULATOR receiver
BCE_0653	COG0456	acetyltransferase
BCE_0653	COG0454	-acetyltransferase
BCE_0654	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
BCE_0655	COG3383	formate dehydrogenase (NAD+) activity
BCE_0656	COG2427	Protein of unknown function (DUF1641)
BCE_0660	COG0531	amino acid
BCE_0662	COG0640	Transcriptional regulator
BCE_0663	COG2217	Heavy metal translocating P-type atpase
BCE_0664	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
BCE_0667	COG3227	Zinc metalloprotease (Elastase)
BCE_0672	COG2720	vancomycin resistance protein
BCE_0673	COG1316	TRANSCRIPTIONal
BCE_0674	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BCE_0675	COG0346	lactoylglutathione lyase activity
BCE_0676	COG1253	flavin adenine dinucleotide binding
BCE_0677	COG1027	Aspartate ammonia-lyase
BCE_0678	COG1620	l-lactate permease
BCE_0682	COG3104	oligopeptide transport
BCE_0683	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BCE_0684	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BCE_0685	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BCE_0687	COG2226	methyltransferase
BCE_0688	COG0156	8-amino-7-oxononanoate synthase activity
BCE_0689	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BCE_0690	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
BCE_0692	COG4548	von Willebrand factor, type A
BCE_0693	COG0714	Associated with various cellular activities
BCE_0694	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BCE_0697	COG0531	amino acid
BCE_0698	COG2188	Transcriptional regulator
BCE_0699	COG1263	PTS System
BCE_0699	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BCE_0700	COG0366	Alpha amylase catalytic
BCE_0703	COG0697	spore germination
BCE_0704	COG0697	spore germination
BCE_0705	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
BCE_0706	COG1115	amino acid carrier protein
BCE_0707	COG1126	abc transporter atp-binding protein
BCE_0708	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BCE_0709	COG0765	amino acid transport
BCE_0710	COG0765	amino acid transport
BCE_0711	COG0833	amino acid
BCE_0716	COG2378	regulation of single-species biofilm formation
BCE_0717	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
BCE_0718	COG5002	protein histidine kinase activity
BCE_0721	COG0659	secondary active sulfate transmembrane transporter activity
BCE_0724	COG0747	negative chemotaxis
BCE_0726	COG0601	transmembrane transport
BCE_0727	COG4608	Belongs to the ABC transporter superfamily
BCE_0729	COG2271	Major facilitator Superfamily
BCE_0730	COG1846	Transcriptional regulator
BCE_0731	COG0477	Major facilitator Superfamily
BCE_0732	COG1609	Transcriptional regulator
BCE_0733	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BCE_0736	COG1172	Belongs to the binding-protein-dependent transport system permease family
BCE_0737	COG1879	ABC-type sugar transport system periplasmic component
BCE_0738	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
BCE_0742	COG1063	alcohol dehydrogenase
BCE_0745	COG3568	Endonuclease Exonuclease Phosphatase
BCE_0751	COG0840	transmembrane signaling receptor activity
BCE_0752	COG3584	3D domain protein
BCE_0752	COG1388	LysM domain
BCE_0753	COG1476	TRANSCRIPTIONal
BCE_0757	COG3104	oligopeptide transport
BCE_0759	COG1114	Component of the transport system for branched-chain amino acids
BCE_0762	COG1113	amino acid transport
BCE_0763	COG2252	PERMEase
BCE_0766	COG2153	protein acetylation
BCE_0768	COG0569	domain protein
BCE_0768	COG0475	glutathione-regulated potassium exporter activity
BCE_0771	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BCE_0772	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
BCE_0773	COG0833	amino acid
BCE_0774	COG4990	cell redox homeostasis
BCE_0777	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BCE_0778	COG0697	spore germination
BCE_0779	COG0531	amino acid
BCE_0783	COG1918	ferrous iron import across plasma membrane
BCE_0783	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
BCE_0784	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
BCE_0785	COG0573	inorganic phosphate transmembrane transporter activity
BCE_0786	COG0581	inorganic phosphate transmembrane transporter activity
BCE_0788	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BCE_0791	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
BCE_0795	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
BCE_0796	COG1116	anion transmembrane transporter activity
BCE_0797	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BCE_0798	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BCE_0799	COG0352	thiamine-phosphate diphosphorylase activity
BCE_0800	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BCE_0801	COG2104	thiamine diphosphate biosynthetic process
BCE_0803	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BCE_0804	COG0351	phosphomethylpyrimidine kinase
BCE_0812	COG2205	protein histidine kinase activity
BCE_0813	COG2814	Major facilitator Superfamily
BCE_0814	COG1846	Transcriptional regulator
BCE_0817	COG2252	PERMEase
BCE_0818	COG1028	Short-chain dehydrogenase reductase Sdr
BCE_0822	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BCE_0831	COG0778	Nitroreductase
BCE_0832	COG2719	SpoVR family
BCE_0840	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
BCE_0844	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
BCE_0844	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
BCE_0845	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
BCE_0853	COG2719	SpoVR family
BCE_0855	COG1204	response to ionizing radiation
BCE_0858	COG2719	SpoVR family
BCE_0860	COG3591	Belongs to the peptidase S1B family
BCE_0865	COG1937	Protein conserved in bacteria
BCE_0866	COG0425	Belongs to the sulfur carrier protein TusA family
BCE_0866	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BCE_0867	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BCE_0867	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BCE_0868	COG0425	Belongs to the sulfur carrier protein TusA family
BCE_0869	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BCE_0871	COG2210	Belongs to the sulfur carrier protein TusA family
BCE_0872	COG0730	response to heat
BCE_0875	COG1316	TRANSCRIPTIONal
BCE_0877	COG0604	alcohol dehydrogenase
BCE_0878	COG1283	sodium-dependent phosphate transmembrane transporter activity
BCE_0879	COG2814	Major facilitator Superfamily
BCE_0881	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BCE_0881	COG3711	transcriptional antiterminator
BCE_0882	COG1447	Phosphotransferase system cellobiose-specific component IIA
BCE_0883	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BCE_0887	COG1388	LysM domain
BCE_0887	COG3584	3D domain protein
BCE_0888	COG0577	efflux transmembrane transporter activity
BCE_0889	COG1136	(ABC) transporter
BCE_0891	COG5522	Integral membrane protein (intg_mem_TP0381)
BCE_0894	COG1114	Component of the transport system for branched-chain amino acids
BCE_0895	COG3546	catalase activity
BCE_0902	COG0586	Pfam SNARE associated Golgi protein
BCE_0909	COG0531	amino acid
BCE_0910	COG0475	glutathione-regulated potassium exporter activity
BCE_0912	COG1737	Transcriptional regulator
BCE_0914	COG1263	PTS System
BCE_0914	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BCE_0916	COG2259	Doxx family
BCE_0920	COG1522	sequence-specific DNA binding
BCE_0922	COG1028	Short-chain dehydrogenase reductase Sdr
BCE_0925	COG2076	Multidrug Resistance protein
BCE_0926	COG2076	Multidrug Resistance protein
BCE_0927	COG1309	transcriptional regulator
BCE_0928	COG2814	Major facilitator Superfamily
BCE_0929	COG1733	regulation of RNA biosynthetic process
BCE_0931	COG2249	NAD(P)H dehydrogenase (quinone) activity
BCE_0932	COG4533	DNA binding
BCE_0933	COG2211	Major facilitator Superfamily
BCE_0935	COG0693	protein deglycase activity
BCE_0937	COG0531	amino acid
BCE_0940	COG1012	belongs to the aldehyde dehydrogenase family
BCE_0942	COG1132	(ABC) transporter
BCE_0943	COG1132	(ABC) transporter
BCE_0945	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BCE_0946	COG0765	amino acid transport
BCE_0947	COG1126	abc transporter atp-binding protein
BCE_0950	COG0189	ligase activity
BCE_0956	COG0028	Belongs to the TPP enzyme family
BCE_0957	COG3527	Alpha-acetolactate decarboxylase
BCE_0960	COG0561	phosphatase activity
BCE_0962	COG5632	N-Acetylmuramoyl-L-alanine amidase
BCE_0962	COG3409	Peptidoglycan-binding domain 1 protein
BCE_0964	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BCE_0968	COG0659	secondary active sulfate transmembrane transporter activity
BCE_0970	COG0653	protein targeting
BCE_0971	COG2244	polysaccharide biosynthetic process
BCE_0973	COG4196	transglutaminase domain protein
BCE_0973	COG4196	transglutaminase domain protein
BCE_0976	COG1696	Membrane protein involved in D-alanine export
BCE_0979	COG1024	Enoyl-CoA hydratase
BCE_0983	COG1363	Peptidase, m42
BCE_0987	COG4974	Belongs to the 'phage' integrase family
BCE_0990	COG2207	Transcriptional regulator
BCE_0990	COG3708	Transcriptional regulator
BCE_0991	COG0726	polysaccharide deacetylase
BCE_1001	COG0601	transmembrane transport
BCE_1002	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BCE_1003	COG0444	Belongs to the ABC transporter superfamily
BCE_1004	COG4608	Belongs to the ABC transporter superfamily
BCE_1008	COG0477	Major facilitator Superfamily
BCE_1009	COG3290	protein histidine kinase activity
BCE_1010	COG4565	transcriptional regulatory protein
BCE_1011	COG3181	Tripartite tricarboxylate transporter family receptor
BCE_1026	COG1475	DNA binding
BCE_1028	COG0305	Participates in initiation and elongation during chromosome replication
BCE_1034	COG1842	Phage shock protein A
BCE_1046	COG1183	phosphatidylcholine synthase activity
BCE_1052	COG2376	Dihydroxyacetone kinase
BCE_1054	COG2376	Dihydroxyacetone kinase
BCE_1056	COG0457	Tetratricopeptide repeat
BCE_1067	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BCE_1071	COG1959	2 iron, 2 sulfur cluster binding
BCE_1086	COG1191	sigma factor activity
BCE_1088	COG2208	phosphoserine phosphatase activity
BCE_1089	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
BCE_1090	COG0784	Response regulator, receiver
BCE_1090	COG2205	protein histidine kinase activity
BCE_1090	COG5002	protein histidine kinase activity
BCE_1101	COG4585	Histidine kinase
BCE_1102	COG2197	response regulator
BCE_1109	COG0420	3'-5' exonuclease activity
BCE_1110	COG4717	serine-type aminopeptidase activity
BCE_1115	COG0346	lactoylglutathione lyase activity
BCE_1116	COG0346	lactoylglutathione lyase activity
BCE_1118	COG1595	DNA-templated transcription, initiation
BCE_1120	COG2267	carboxylic ester hydrolase activity
BCE_1123	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
BCE_1124	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
BCE_1126	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
BCE_1127	COG2963	transposase activity
BCE_1128	COG2801	Transposase and inactivated derivatives
BCE_1131	COG1595	DNA-templated transcription, initiation
BCE_1135	COG3973	AAA domain
BCE_1144	COG0464	growth
BCE_1145	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BCE_1150	COG4980	gas vesicle protein
BCE_1151	COG0537	adenosine 5'-monophosphoramidase activity
BCE_1152	COG1131	(ABC) transporter
BCE_1153	COG4473	ABC transporter
BCE_1156	COG1309	transcriptional regulator
BCE_1158	COG3402	PFAM membrane-flanked domain
BCE_1159	COG3428	Bacterial PH domain
BCE_1163	COG3402	PFAM membrane-flanked domain
BCE_1164	COG3428	Bacterial PH domain
BCE_1165	COG2329	Antibiotic biosynthesis monooxygenase
BCE_1166	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BCE_1177	COG1309	transcriptional regulator
BCE_1178	COG1511	domain protein
BCE_1184	COG2318	DinB family
BCE_1185	COG2378	regulation of single-species biofilm formation
BCE_1186	COG1609	Transcriptional regulator
BCE_1188	COG1234	tRNA 3'-trailer cleavage
BCE_1189	COG0095	Lipoate-protein ligase
BCE_1193	COG0318	PFAM AMP-dependent synthetase and ligase
BCE_1196	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
BCE_1198	COG4208	sulfate ABC transporter
BCE_1204	COG3209	COG3209 Rhs family protein
BCE_1211	COG1073	alpha beta
BCE_1212	COG1408	metallophosphoesterase
BCE_1213	COG1078	dGTPase activity
BCE_1215	COG1595	DNA-templated transcription, initiation
BCE_1216	COG3708	Transcriptional regulator
BCE_1216	COG2207	Transcriptional regulator
BCE_1217	COG2205	protein histidine kinase activity
BCE_1218	COG0745	RESPONSE REGULATOR receiver
BCE_1223	COG0501	Belongs to the peptidase M48B family
BCE_1224	COG0697	spore germination
BCE_1227	COG0497	DNA recombination
BCE_1228	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
BCE_1229	COG2224	Isocitrate lyase
BCE_1232	COG1278	Cold shock
BCE_1236	COG4903	ComK protein
BCE_1238	COG2197	response regulator
BCE_1242	COG0398	Pfam SNARE associated Golgi protein
BCE_1254	COG0179	Fumarylacetoacetate (FAA) hydrolase
BCE_1259	COG0367	asparagine synthase
BCE_1261	COG0753	catalase activity
BCE_1264	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
BCE_1268	COG3339	Conserved Protein
BCE_1269	COG0004	ammonium transporteR
BCE_1274	COG2996	Protein conserved in bacteria
BCE_1275	COG3209	COG3209 Rhs family protein
BCE_1280	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BCE_1282	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BCE_1285	COG0561	phosphatase activity
BCE_1290	COG2267	carboxylic ester hydrolase activity
BCE_1293	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BCE_1294	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BCE_1295	COG5504	Zn-dependent protease
BCE_1297	COG0180	Tryptophanyl-tRNA synthetase
BCE_1300	COG4166	transmembrane transport
BCE_1301	COG0601	transmembrane transport
BCE_1302	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BCE_1303	COG0444	Belongs to the ABC transporter superfamily
BCE_1304	COG4608	Belongs to the ABC transporter superfamily
BCE_1305	COG0534	Mate efflux family protein
BCE_1306	COG4166	transmembrane transport
BCE_1309	COG1393	Belongs to the ArsC family
BCE_1310	COG0861	Integral membrane protein TerC family
BCE_1311	COG4862	establishment of competence for transformation
BCE_1312	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BCE_1314	COG1164	Oligoendopeptidase f
BCE_1317	COG2346	COG2346, Truncated hemoglobins
BCE_1318	COG4116	CYTH
BCE_1320	COG2357	RelA SpoT domain protein
BCE_1322	COG0564	pseudouridine synthase activity
BCE_1325	COG0772	Belongs to the SEDS family
BCE_1326	COG1216	Glycosyl transferase, family 2
BCE_1331	COG0463	Glycosyl transferase, family 2
BCE_1331	COG0457	Tetratricopeptide repeat
BCE_1335	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
BCE_1338	COG1091	dTDP-4-dehydrorhamnose reductase activity
BCE_1347	COG2153	protein acetylation
BCE_1349	COG2382	esterase
BCE_1352	COG5492	domain, Protein
BCE_1353	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BCE_1357	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
BCE_1357	COG0512	Glutamine amidotransferase of anthranilate synthase
BCE_1365	COG1620	l-lactate permease
BCE_1367	COG5634	Uncharacterized conserved protein (DUF2278)
BCE_1375	COG2226	methyltransferase
BCE_1379	COG0508	dehydrogenase complex catalyzes the overall conversion of
BCE_1381	COG1476	TRANSCRIPTIONal
BCE_1388	COG1686	Belongs to the peptidase S11 family
BCE_1389	COG0681	Belongs to the peptidase S26 family
BCE_1397	COG1012	belongs to the aldehyde dehydrogenase family
BCE_1399	COG1176	ABC-type spermidine putrescine transport system, permease component I
BCE_1400	COG1177	transmembrane transport
BCE_1401	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
BCE_1403	COG2409	Drug exporters of the RND superfamily
BCE_1405	COG0564	pseudouridine synthase activity
BCE_1407	COG2340	Cysteine-rich secretory protein family
BCE_1409	COG0247	lactate metabolic process
BCE_1410	COG0277	FAD linked oxidase domain protein
BCE_1411	COG3835	regulator
BCE_1413	COG0745	RESPONSE REGULATOR receiver
BCE_1414	COG5002	protein histidine kinase activity
BCE_1415	COG2186	Transcriptional regulator
BCE_1419	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
BCE_1421	COG2116	formate transmembrane transporter activity
BCE_1422	COG0861	Integral membrane protein TerC family
BCE_1423	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BCE_1425	COG2030	dehydratase
BCE_1429	COG1028	Short-chain dehydrogenase reductase Sdr
BCE_1430	COG3243	poly(R)-hydroxyalkanoic acid synthase
BCE_1432	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BCE_1436	COG1840	ABC-type Fe3 transport system, periplasmic component
BCE_1437	COG3842	ATPase activity
BCE_1442	COG1349	DNA-binding transcription factor activity
BCE_1445	COG0235	Class ii aldolase
BCE_1447	COG2861	carbohydrate metabolic process
BCE_1449	COG3852	Histidine kinase
BCE_1450	COG1846	Transcriptional regulator
BCE_1453	COG2318	DinB family
BCE_1455	COG5002	protein histidine kinase activity
BCE_1459	COG0720	synthase
BCE_1469	COG1780	Probably involved in ribonucleotide reductase function
BCE_1471	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BCE_1472	COG1725	Transcriptional regulator
BCE_1473	COG1131	(ABC) transporter
BCE_1475	COG1131	(ABC) transporter
BCE_1476	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
BCE_1477	COG1266	CAAX protease self-immunity
BCE_1479	COG1522	sequence-specific DNA binding
BCE_1482	COG1619	proteins homologs of microcin C7 resistance protein MccF
BCE_1483	COG2070	2-Nitropropane dioxygenase
BCE_1484	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
BCE_1486	COG1696	Membrane protein involved in D-alanine export
BCE_1492	COG0716	FMN binding
BCE_1496	COG3173	Aminoglycoside phosphotransferase
BCE_1506	COG1846	Transcriptional regulator
BCE_1508	COG1301	dicarboxylic acid transport
BCE_1509	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BCE_1510	COG4709	membrane
BCE_1511	COG3874	Sporulation protein YtfJ
BCE_1516	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BCE_1517	COG0028	Belongs to the TPP enzyme family
BCE_1518	COG0440	acetolactate synthase activity
BCE_1533	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
BCE_1536	COG1183	phosphatidylcholine synthase activity
BCE_1538	COG1368	sulfuric ester hydrolase activity
BCE_1542	COG0019	diaminopimelate decarboxylase activity
BCE_1546	COG0529	Catalyzes the synthesis of activated sulfate
BCE_1547	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BCE_1551	COG1648	precorrin-2 dehydrogenase activity
BCE_1552	COG0733	neurotransmitter:sodium symporter activity
BCE_1557	COG1757	Na H antiporter
BCE_1561	COG4758	membrane
BCE_1562	COG4585	Histidine kinase
BCE_1563	COG2197	response regulator
BCE_1565	COG1114	Component of the transport system for branched-chain amino acids
BCE_1567	COG2226	methyltransferase
BCE_1575	COG0730	response to heat
BCE_1576	COG0306	phosphate transporter
BCE_1577	COG1392	Phosphate transport regulator
BCE_1578	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BCE_1583	COG3852	Histidine kinase
BCE_1584	COG1801	Protein of unknown function DUF72
BCE_1586	COG0582	viral genome integration into host DNA
BCE_1587	COG5002	protein histidine kinase activity
BCE_1590	COG0392	lysyltransferase activity
BCE_1590	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
BCE_1593	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
BCE_1594	COG1686	Belongs to the peptidase S11 family
BCE_1595	COG2715	membrane protein required for spore maturation
BCE_1596	COG0700	Nucleoside recognition
BCE_1597	COG1187	pseudouridine synthase activity
BCE_1599	COG1333	cytochrome c biogenesis protein
BCE_1600	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BCE_1601	COG0745	RESPONSE REGULATOR receiver
BCE_1602	COG5002	protein histidine kinase activity
BCE_1603	COG2096	Adenosyltransferase
BCE_1604	COG4942	peptidase
BCE_1606	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
BCE_1607	COG1141	Ferredoxin
BCE_1609	COG0514	ATP-dependent DNA helicase (RecQ)
BCE_1610	COG0514	ATP-dependent DNA helicase (RecQ)
BCE_1611	COG1266	CAAX protease self-immunity
BCE_1613	COG1408	metallophosphoesterase
BCE_1614	COG0789	Transcriptional regulator
BCE_1616	COG4862	establishment of competence for transformation
BCE_1617	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
BCE_1621	COG0492	ferredoxin-NADP+ reductase activity
BCE_1636	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
BCE_1639	COG0142	geranyltranstransferase activity
BCE_1641	COG0142	geranyltranstransferase activity
BCE_1646	COG0457	Tetratricopeptide repeat
BCE_1650	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
BCE_1651	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
BCE_1651	COG2010	Cytochrome c
BCE_1653	COG4347	Protein of unknown function (DUF1405)
BCE_1656	COG2738	Putative neutral zinc metallopeptidase
BCE_1658	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BCE_1660	COG1694	Mazg nucleotide pyrophosphohydrolase
BCE_1663	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
BCE_1664	COG0438	transferase activity, transferring glycosyl groups
BCE_1671	COG1199	ATP-dependent helicase activity
BCE_1671	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BCE_1675	COG3935	DnaD domain protein
BCE_1676	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
BCE_1678	COG4499	WXG100 protein secretion system (Wss), protein YukC
BCE_1678	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BCE_1690	COG0116	Belongs to the methyltransferase superfamily
BCE_1692	COG1199	ATP-dependent helicase activity
BCE_1693	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
BCE_1695	COG0024	Methionine aminopeptidase
BCE_1698	COG2233	PERMEase
BCE_1699	COG2311	Membrane
BCE_1701	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
BCE_1703	COG0456	acetyltransferase
BCE_1707	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BCE_1710	COG0454	-acetyltransferase
BCE_1714	COG0328	RNA-DNA hybrid ribonuclease activity
BCE_1721	COG3403	YqcI/YcgG family
BCE_1722	COG1280	lysine exporter protein (LysE YggA)
BCE_1725	COG3162	membrane
BCE_1726	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BCE_1727	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BCE_1729	COG0475	glutathione-regulated potassium exporter activity
BCE_1730	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BCE_1731	COG0789	Transcriptional regulator
BCE_1731	COG4978	Transcriptional regulator
BCE_1733	COG2323	membrane
BCE_1734	COG1434	Gram-negative-bacterium-type cell wall biogenesis
BCE_1738	COG2814	Major facilitator Superfamily
BCE_1744	COG1923	regulation of RNA biosynthetic process
BCE_1746	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
BCE_1747	COG1360	Flagellar Motor Protein
BCE_1748	COG2201	protein-glutamate methylesterase activity
BCE_1749	COG2198	Histidine kinase
BCE_1749	COG0643	Histidine kinase
BCE_1750	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BCE_1750	COG1776	CheC inhibitor of MCP methylation
BCE_1754	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
BCE_1758	COG1256	bacterial-type flagellum assembly
BCE_1759	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BCE_1760	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
BCE_1763	COG1815	bacterial-type flagellum-dependent cell motility
BCE_1764	COG1558	bacterial-type flagellum-dependent cell motility
BCE_1765	COG1677	Flagellar hook-basal body complex protein FliE
BCE_1766	COG1766	The M ring may be actively involved in energy transduction
BCE_1767	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BCE_1769	COG1157	protein secretion by the type III secretion system
BCE_1777	COG0835	chemotaxis
BCE_1777	COG0784	Response regulator, receiver
BCE_1779	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BCE_1780	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BCE_1781	COG0741	lytic transglycosylase activity
BCE_1783	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BCE_1784	COG1776	CheC inhibitor of MCP methylation
BCE_1784	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BCE_1786	COG1338	Plays a role in the flagellum-specific transport system
BCE_1787	COG1987	bacterial-type flagellum assembly
BCE_1790	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
BCE_1791	COG1419	protein localization to endoplasmic reticulum
BCE_1792	COG4786	Flagellar basal body rod
BCE_1793	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
BCE_1798	COG1309	transcriptional regulator
BCE_1802	COG2329	Antibiotic biosynthesis monooxygenase
BCE_1804	COG3764	Sortase (surface protein transpeptidase)
BCE_1805	COG3764	Sortase (surface protein transpeptidase)
BCE_1811	COG3842	ATPase activity
BCE_1813	COG1177	transmembrane transport
BCE_1814	COG1234	tRNA 3'-trailer cleavage
BCE_1817	COG1028	Short-chain dehydrogenase reductase Sdr
BCE_1822	COG0406	alpha-ribazole phosphatase activity
BCE_1828	COG0367	asparagine synthase
BCE_1834	COG1802	Transcriptional regulator
BCE_1835	COG0697	spore germination
BCE_1836	COG0523	cobalamin synthesis protein
BCE_1837	COG0701	Predicted permease
BCE_1839	COG0438	transferase activity, transferring glycosyl groups
BCE_1839	COG1216	Glycosyl transferase, family 2
BCE_1840	COG1757	Na H antiporter
BCE_1841	COG0114	fumarate hydratase activity
BCE_1846	COG0534	Mate efflux family protein
BCE_1847	COG3340	Belongs to the peptidase S51 family
BCE_1856	COG2733	membrane
BCE_1865	COG1131	(ABC) transporter
BCE_1869	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BCE_1870	COG0528	UMP kinase activity
BCE_1872	COG1027	Aspartate ammonia-lyase
BCE_1873	COG0281	malic enzyme
BCE_1874	COG4191	Histidine kinase
BCE_1875	COG0784	Response regulator, receiver
BCE_1877	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
BCE_1881	COG3620	sequence-specific DNA binding
BCE_1888	COG1051	belongs to the nudix hydrolase family
BCE_1889	COG0860	N-Acetylmuramoyl-L-alanine amidase
BCE_1897	COG3842	ATPase activity
BCE_1898	COG2508	Transcriptional regulator
BCE_1900	COG1175	transmembrane transport
BCE_1901	COG0395	ABC-type sugar transport system, permease component
BCE_1904	COG2222	sugar isomerase
BCE_1907	COG1105	Belongs to the carbohydrate kinase PfkB family
BCE_1908	COG1940	carbohydrate kinase activity
BCE_1910	COG1695	Transcriptional regulator
BCE_1913	COG0477	Major facilitator Superfamily
BCE_1914	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BCE_1916	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BCE_1917	COG4166	transmembrane transport
BCE_1918	COG2223	nitrite transmembrane transporter activity
BCE_1919	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
BCE_1922	COG2244	polysaccharide biosynthetic process
BCE_1923	COG0733	neurotransmitter:sodium symporter activity
BCE_1925	COG5566	PFAM Mor transcription activator
BCE_1926	COG2323	membrane
BCE_1931	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BCE_1933	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BCE_1934	COG0028	Belongs to the TPP enzyme family
BCE_1938	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
BCE_1943	COG2814	Major facilitator Superfamily
BCE_1944	COG3384	dioxygenase
BCE_1947	COG3279	Response regulator of the LytR AlgR family
BCE_1948	COG0427	acetyl-CoA hydrolase
BCE_1953	COG1073	alpha beta
BCE_1954	COG4166	transmembrane transport
BCE_1955	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BCE_1960	COG1914	H( )-stimulated, divalent metal cation uptake system
BCE_1964	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BCE_1966	COG0531	amino acid
BCE_1974	COG2390	Transcriptional regulator
BCE_1976	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BCE_1977	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
BCE_1980	COG4846	Membrane protein involved in cytochrome C biogenesis
BCE_1982	COG0006	proline dipeptidase activity
BCE_1986	COG1309	transcriptional regulator
BCE_1987	COG1131	(ABC) transporter
BCE_1988	COG1131	(ABC) transporter
BCE_1994	COG1114	Component of the transport system for branched-chain amino acids
BCE_1997	COG2372	response to copper ion
BCE_1997	COG1276	copper resistance
BCE_1998	COG4549	nuclear export factor GLE1
BCE_1999	COG0697	spore germination
BCE_2000	COG0583	DNA-binding transcription factor activity
BCE_2001	COG1959	2 iron, 2 sulfur cluster binding
BCE_2002	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
BCE_2003	COG0778	Nitroreductase
BCE_2006	COG0628	permease
BCE_2007	COG0039	L-malate dehydrogenase activity
BCE_2008	COG1231	oxidoreductase activity
BCE_2009	COG0523	cobalamin synthesis protein
BCE_2011	COG0411	ABC transporter
BCE_2015	COG0583	DNA-binding transcription factor activity
BCE_2017	COG1942	4-Oxalocrotonate Tautomerase
BCE_2021	COG1271	oxidase subunit
BCE_2022	COG1294	oxidase, subunit
BCE_2023	COG4988	ABC transporter
BCE_2024	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
BCE_2026	COG1216	Glycosyl transferase, family 2
BCE_2034	COG1686	Belongs to the peptidase S11 family
BCE_2037	COG1388	LysM domain
BCE_2037	COG0791	NLP P60 protein
BCE_2040	COG1132	(ABC) transporter
BCE_2041	COG0745	RESPONSE REGULATOR receiver
BCE_2042	COG5002	protein histidine kinase activity
BCE_2044	COG0300	oxidoreductase activity
BCE_2047	COG0726	polysaccharide deacetylase
BCE_2049	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
BCE_2051	COG0460	homoserine dehydrogenase
BCE_2056	COG1316	TRANSCRIPTIONal
BCE_2059	COG0745	RESPONSE REGULATOR receiver
BCE_2060	COG5002	protein histidine kinase activity
BCE_2061	COG0726	polysaccharide deacetylase
BCE_2063	COG1285	pathogenesis
BCE_2064	COG1247	-acetyltransferase
BCE_2067	COG1279	arginine transmembrane transporter activity
BCE_2070	COG1752	Esterase of the alpha-beta hydrolase superfamily
BCE_2076	COG0577	efflux transmembrane transporter activity
BCE_2077	COG2002	toxin-antitoxin pair type II binding
BCE_2078	COG1404	Belongs to the peptidase S8 family
BCE_2079	COG0640	Transcriptional regulator
BCE_2080	COG0667	Aldo Keto reductase
BCE_2081	COG2814	Major facilitator Superfamily
BCE_2091	COG3949	Membrane
BCE_2092	COG0783	Belongs to the Dps family
BCE_2096	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BCE_2098	COG1231	oxidoreductase activity
BCE_2099	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BCE_2100	COG4989	oxidoreductase activity
BCE_2101	COG0523	cobalamin synthesis protein
BCE_2102	COG0456	acetyltransferase
BCE_2103	COG3443	Belongs to the bacterial solute-binding protein 9 family
BCE_2103	COG0803	Belongs to the bacterial solute-binding protein 9 family
BCE_2105	COG0702	epimerase
BCE_2107	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BCE_2110	COG4166	transmembrane transport
BCE_2113	COG0406	alpha-ribazole phosphatase activity
BCE_2115	COG5337	Spore coat protein CotH
BCE_2116	COG1051	belongs to the nudix hydrolase family
BCE_2117	COG0586	Pfam SNARE associated Golgi protein
BCE_2118	COG2244	polysaccharide biosynthetic process
BCE_2120	COG0701	Predicted permease
BCE_2121	COG3689	TIGRFAM TIGR03943 family protein
BCE_2122	COG1607	acyl-coa hydrolase
BCE_2123	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BCE_2126	COG0702	epimerase
BCE_2127	COG2839	Protein conserved in bacteria
BCE_2128	COG1253	flavin adenine dinucleotide binding
BCE_2133	COG1114	Component of the transport system for branched-chain amino acids
BCE_2135	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BCE_2139	COG0860	N-Acetylmuramoyl-L-alanine amidase
BCE_2141	COG1876	peptidase activity
BCE_2143	COG0154	amidase activity
BCE_2144	COG2211	Major facilitator Superfamily
BCE_2148	COG2368	4-hydroxyphenylacetate
BCE_2150	COG0196	riboflavin kinase activity
BCE_2153	COG0251	oxidation-reduction process
BCE_2159	COG1942	4-Oxalocrotonate Tautomerase
BCE_2161	COG0561	phosphatase activity
BCE_2163	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BCE_2168	COG1819	glycosyl
BCE_2169	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BCE_2170	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BCE_2176	COG0456	acetyltransferase
BCE_2181	COG3874	Sporulation protein YtfJ
BCE_2186	COG2226	methyltransferase
BCE_2192	COG0346	lactoylglutathione lyase activity
BCE_2195	COG1595	DNA-templated transcription, initiation
BCE_2198	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
BCE_2202	COG0386	Belongs to the glutathione peroxidase family
BCE_2203	COG1305	Transglutaminase-like
BCE_2204	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
BCE_2205	COG0714	Associated with various cellular activities
BCE_2206	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
BCE_2207	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
BCE_2211	COG1070	Carbohydrate kinase
BCE_2214	COG0477	Major facilitator Superfamily
BCE_2214	COG2814	Major facilitator Superfamily
BCE_2222	COG2359	stage V sporulation protein S
BCE_2224	COG1418	mRNA catabolic process
BCE_2225	COG0488	(ABC) transporter
BCE_2228	COG0629	single-stranded DNA binding
BCE_2231	COG1413	lyase activity
BCE_2234	COG2136	Putative SAM-dependent methyltransferase
BCE_2234	COG2521	methyltransferase
BCE_2236	COG0018	arginyl-trna synthetase
BCE_2244	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
BCE_2246	COG0733	neurotransmitter:sodium symporter activity
BCE_2251	COG2610	gluconate transmembrane transporter activity
BCE_2252	COG1454	alcohol dehydrogenase
BCE_2253	COG1794	racemase activity, acting on amino acids and derivatives
BCE_2255	COG0456	acetyltransferase
BCE_2256	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
BCE_2258	COG1131	(ABC) transporter
BCE_2259	COG4473	ABC transporter
BCE_2262	COG0546	phosphoglycolate phosphatase activity
BCE_2264	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BCE_2268	COG0768	penicillin binding
BCE_2270	COG0204	Acyl-transferase
BCE_2271	COG1272	protein, Hemolysin III
BCE_2273	COG0805	protein transport
BCE_2276	COG1307	EDD domain protein, DegV family
BCE_2277	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
BCE_2278	COG1999	signal sequence binding
BCE_2279	COG0071	Belongs to the small heat shock protein (HSP20) family
BCE_2280	COG0367	asparagine synthase
BCE_2283	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BCE_2285	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BCE_2288	COG1335	isochorismatase
BCE_2289	COG1051	belongs to the nudix hydrolase family
BCE_2290	COG0071	Belongs to the small heat shock protein (HSP20) family
BCE_2291	COG0668	transmembrane transport
BCE_2292	COG2203	Gaf domain
BCE_2292	COG4585	Histidine kinase
BCE_2293	COG2197	response regulator
BCE_2294	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BCE_2295	COG1737	Transcriptional regulator
BCE_2296	COG1064	alcohol dehydrogenase
BCE_2300	COG1522	sequence-specific DNA binding
BCE_2302	COG1070	Carbohydrate kinase
BCE_2304	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
BCE_2313	COG0517	IMP dehydrogenase activity
BCE_2313	COG1125	glycine betaine transport
BCE_2314	COG1174	glycine betaine transport
BCE_2323	COG1012	belongs to the aldehyde dehydrogenase family
BCE_2324	COG5506	Protein of unknown function (DUF1694)
BCE_2328	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BCE_2329	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
BCE_2330	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
BCE_2331	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BCE_2332	COG0456	acetyltransferase
BCE_2333	COG3829	transcription factor binding
BCE_2334	COG1509	lysine 2,3-aminomutase activity
BCE_2340	COG0515	serine threonine protein kinase
BCE_2340	COG3064	Membrane
BCE_2340	COG4991	sh3 domain protein
BCE_2342	COG0671	phosphoesterase, PA-phosphatase related
BCE_2343	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
BCE_2344	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BCE_2359	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BCE_2370	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BCE_2370	COG4499	WXG100 protein secretion system (Wss), protein YukC
BCE_2372	COG2814	Major facilitator Superfamily
BCE_2373	COG4841	protein insertion into membrane
BCE_2376	COG0372	Belongs to the citrate synthase family
BCE_2377	COG2079	MmgE PrpD family protein
BCE_2378	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
BCE_2380	COG1960	acyl-CoA dehydrogenase activity
BCE_2381	COG2084	Dehydrogenase
BCE_2383	COG1280	lysine exporter protein (LysE YggA)
BCE_2384	COG1024	Enoyl-CoA hydratase
BCE_2390	COG0420	3'-5' exonuclease activity
BCE_2396	COG2223	nitrite transmembrane transporter activity
BCE_2398	COG1028	Short-chain dehydrogenase reductase Sdr
BCE_2399	COG1169	isochorismate synthase
BCE_2400	COG1021	2,3-dihydroxybenzoate-AMP ligase
BCE_2401	COG1535	isochorismatase
BCE_2401	COG3433	isochorismatase activity
BCE_2402	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BCE_2403	COG3251	PFAM MbtH domain protein
BCE_2404	COG2814	Major facilitator Superfamily
BCE_2407	COG0776	regulation of translation
BCE_2409	COG2318	DinB family
BCE_2411	COG1115	amino acid carrier protein
BCE_2416	COG2329	Antibiotic biosynthesis monooxygenase
BCE_2417	COG1187	pseudouridine synthase activity
BCE_2419	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
BCE_2420	COG1136	(ABC) transporter
BCE_2422	COG0596	Alpha beta hydrolase
BCE_2423	COG2814	Major facilitator Superfamily
BCE_2426	COG0028	Belongs to the TPP enzyme family
BCE_2428	COG2226	methyltransferase
BCE_2438	COG1846	Transcriptional regulator
BCE_2440	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BCE_2447	COG1247	-acetyltransferase
BCE_2452	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BCE_2454	COG1278	Cold shock
BCE_2460	COG0561	phosphatase activity
BCE_2462	COG1846	Transcriptional regulator
BCE_2463	COG2814	Major facilitator Superfamily
BCE_2464	COG0583	DNA-binding transcription factor activity
BCE_2465	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BCE_2469	COG0583	DNA-binding transcription factor activity
BCE_2471	COG2258	MOSC domain
BCE_2474	COG1132	(ABC) transporter
BCE_2475	COG1132	(ABC) transporter
BCE_2481	COG1396	sequence-specific DNA binding
BCE_2494	COG1649	PFAM Uncharacterised BCR, COG1649
BCE_2499	COG2971	BadF BadG BcrA BcrD
BCE_2503	COG1846	Transcriptional regulator
BCE_2510	COG1309	transcriptional regulator
BCE_2513	COG0577	efflux transmembrane transporter activity
BCE_2513	COG1136	(ABC) transporter
BCE_2514	COG3615	Tellurite resistance protein tehB
BCE_2514	COG0500	methyltransferase
BCE_2516	COG2226	methyltransferase
BCE_2517	COG3961	Belongs to the TPP enzyme family
BCE_2518	COG1846	Transcriptional regulator
BCE_2527	COG2195	Cleaves the N-terminal amino acid of tripeptides
BCE_2529	COG1686	Belongs to the peptidase S11 family
BCE_2533	COG0768	penicillin binding
BCE_2534	COG1595	DNA-templated transcription, initiation
BCE_2536	COG0768	penicillin binding
BCE_2541	COG1408	metallophosphoesterase
BCE_2543	COG1131	(ABC) transporter
BCE_2545	COG1309	transcriptional regulator
BCE_2548	COG1960	acyl-CoA dehydrogenase activity
BCE_2549	COG0439	Biotin carboxylase
BCE_2550	COG0511	ligase activity, forming carbon-carbon bonds
BCE_2551	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BCE_2552	COG1024	Enoyl-CoA hydratase
BCE_2553	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
BCE_2554	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BCE_2558	COG0572	uridine kinase
BCE_2559	COG0596	Alpha beta hydrolase
BCE_2560	COG2318	DinB family
BCE_2562	COG1686	Belongs to the peptidase S11 family
BCE_2567	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
BCE_2568	COG2910	NAD(P)H-binding
BCE_2571	COG3227	Zinc metalloprotease (Elastase)
BCE_2576	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
BCE_2579	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BCE_2582	COG2814	Major facilitator Superfamily
BCE_2585	COG2226	methyltransferase
BCE_2597	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BCE_2601	COG2368	4-hydroxyphenylacetate
BCE_2604	COG1063	alcohol dehydrogenase
BCE_2607	COG2323	membrane
BCE_2608	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BCE_2609	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BCE_2611	COG3386	PFAM SMP-30 Gluconolaconase
BCE_2614	COG3773	Cell wall hydrolase
BCE_2617	COG0745	RESPONSE REGULATOR receiver
BCE_2618	COG2205	protein histidine kinase activity
BCE_2621	COG1136	(ABC) transporter
BCE_2622	COG0577	efflux transmembrane transporter activity
BCE_2626	COG0460	homoserine dehydrogenase
BCE_2627	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BCE_2629	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
BCE_2638	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
BCE_2654	COG2124	cytochrome p450
BCE_2661	COG0561	phosphatase activity
BCE_2662	COG5002	protein histidine kinase activity
BCE_2664	COG1819	glycosyl
BCE_2665	COG1794	racemase activity, acting on amino acids and derivatives
BCE_2671	COG2205	protein histidine kinase activity
BCE_2673	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
BCE_2675	COG0745	RESPONSE REGULATOR receiver
BCE_2676	COG5002	protein histidine kinase activity
BCE_2677	COG0604	alcohol dehydrogenase
BCE_2678	COG0671	phosphoesterase, PA-phosphatase related
BCE_2681	COG1028	Short-chain dehydrogenase reductase Sdr
BCE_2690	COG0693	protein deglycase activity
BCE_2691	COG0076	glutamate decarboxylase activity
BCE_2694	COG0596	Alpha beta hydrolase
BCE_2699	COG2814	Major facilitator Superfamily
BCE_2703	COG0584	glycerophosphoryl diester phosphodiesterase
BCE_2708	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BCE_2709	COG0697	spore germination
BCE_2718	COG2223	nitrite transmembrane transporter activity
BCE_2720	COG0592	DNA-directed DNA polymerase activity
BCE_2721	COG1051	belongs to the nudix hydrolase family
BCE_2727	COG3878	Protein conserved in bacteria
BCE_2734	COG0322	excinuclease ABC activity
BCE_2742	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BCE_2744	COG2162	N-hydroxyarylamine O-acetyltransferase activity
BCE_2747	COG1011	Hydrolase
BCE_2749	COG0745	RESPONSE REGULATOR receiver
BCE_2750	COG5002	protein histidine kinase activity
BCE_2757	COG1136	(ABC) transporter
BCE_2758	COG0577	efflux transmembrane transporter activity
BCE_2761	COG1523	belongs to the glycosyl hydrolase 13 family
BCE_2766	COG0201	protein transport
BCE_2768	COG0697	spore germination
BCE_2769	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BCE_2777	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BCE_2780	COG2959	enzyme of heme biosynthesis
BCE_2781	COG3773	Cell wall hydrolase
BCE_2781	COG3409	Peptidoglycan-binding domain 1 protein
BCE_2794	COG3284	Transcriptional regulator
BCE_2797	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BCE_2798	COG1349	DNA-binding transcription factor activity
BCE_2801	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BCE_2802	COG0508	dehydrogenase complex catalyzes the overall conversion of
BCE_2803	COG0022	dehydrogenase e1 component
BCE_2804	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
BCE_2806	COG1028	Short-chain dehydrogenase reductase Sdr
BCE_2807	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
BCE_2807	COG0456	acetyltransferase
BCE_2810	COG2816	NAD+ diphosphatase activity
BCE_2815	COG4176	ABC-type proline glycine betaine transport system permease component
BCE_2816	COG0517	IMP dehydrogenase activity
BCE_2816	COG4175	Glycine betaine
BCE_2823	COG2153	protein acetylation
BCE_2824	COG3397	chitin binding
BCE_2825	COG1819	glycosyl
BCE_2829	COG2205	protein histidine kinase activity
BCE_2830	COG2226	methyltransferase
BCE_2831	COG2315	Protein conserved in bacteria
BCE_2839	COG3973	AAA domain
BCE_2842	COG0514	ATP-dependent DNA helicase (RecQ)
BCE_2851	COG4637	Psort location Cytoplasmic, score
BCE_2855	COG3397	chitin binding
BCE_2858	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BCE_2859	COG1115	amino acid carrier protein
BCE_2860	COG1012	belongs to the aldehyde dehydrogenase family
BCE_2861	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BCE_2863	COG3938	Belongs to the proline racemase family
BCE_2872	COG0586	Pfam SNARE associated Golgi protein
BCE_2875	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
BCE_2876	COG0519	Catalyzes the synthesis of GMP from XMP
BCE_2877	COG4166	transmembrane transport
BCE_2879	COG4948	Mandelate Racemase Muconate Lactonizing
BCE_2891	COG2936	dipeptidyl-peptidase activity
BCE_2892	COG5002	protein histidine kinase activity
BCE_2893	COG0745	RESPONSE REGULATOR receiver
BCE_2897	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
BCE_2902	COG1164	Oligoendopeptidase f
BCE_2904	COG0531	amino acid
BCE_2905	COG1522	sequence-specific DNA binding
BCE_2906	COG1307	EDD domain protein, DegV family
BCE_2916	COG2814	Major facilitator Superfamily
BCE_2918	COG1664	Polymer-forming cytoskeletal
BCE_2919	COG0789	Transcriptional regulator
BCE_2920	COG4533	DNA binding
BCE_2921	COG0477	Major facilitator Superfamily
BCE_2921	COG2814	Major facilitator Superfamily
BCE_2926	COG2261	transglycosylase associated protein
BCE_2929	COG2226	methyltransferase
BCE_2938	COG0436	Aminotransferase
BCE_2939	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
BCE_2941	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
BCE_2944	COG1131	(ABC) transporter
BCE_2955	COG0628	permease
BCE_2958	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BCE_2959	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BCE_2960	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BCE_2969	COG2746	aminoglycoside 3-N-acetyltransferase activity
BCE_2973	COG0697	spore germination
BCE_2978	COG4912	Dna alkylation repair
BCE_2979	COG0726	polysaccharide deacetylase
BCE_2981	COG3037	sugar-specific permease SgaT UlaA
BCE_2983	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BCE_2986	COG0861	Integral membrane protein TerC family
BCE_2987	COG1368	sulfuric ester hydrolase activity
BCE_2988	COG0488	(ABC) transporter
BCE_2990	COG1033	growth of symbiont in host cell
BCE_2990	COG2409	Drug exporters of the RND superfamily
BCE_2991	COG1309	transcriptional regulator
BCE_2995	COG0287	Prephenate dehydrogenase
BCE_2998	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
BCE_2998	COG1605	Chorismate mutase
BCE_3005	COG1388	LysM domain
BCE_3005	COG3584	3D domain protein
BCE_3012	COG1879	ABC-type sugar transport system periplasmic component
BCE_3013	COG1172	Belongs to the binding-protein-dependent transport system permease family
BCE_3014	COG1172	Belongs to the binding-protein-dependent transport system permease family
BCE_3016	COG2390	Transcriptional regulator
BCE_3020	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BCE_3024	COG2329	Antibiotic biosynthesis monooxygenase
BCE_3027	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BCE_3031	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BCE_3032	COG4187	Peptidase family M20/M25/M40
BCE_3033	COG1414	Transcriptional regulator
BCE_3034	COG0833	amino acid
BCE_3035	COG1690	Belongs to the RtcB family
BCE_3036	COG3239	Fatty acid desaturase
BCE_3038	COG1785	Belongs to the alkaline phosphatase family
BCE_3040	COG3655	Transcriptional regulator
BCE_3042	COG4377	Putative membrane peptidase family (DUF2324)
BCE_3044	COG3279	Response regulator of the LytR AlgR family
BCE_3047	COG0346	lactoylglutathione lyase activity
BCE_3053	COG0714	Associated with various cellular activities
BCE_3057	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BCE_3059	COG0753	catalase activity
BCE_3060	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BCE_3064	COG1846	Transcriptional regulator
BCE_3066	COG1280	lysine exporter protein (LysE YggA)
BCE_3073	COG0714	Associated with various cellular activities
BCE_3075	COG0778	Nitroreductase
BCE_3076	COG1846	Transcriptional regulator
BCE_3078	COG0457	Tetratricopeptide repeat
BCE_3083	COG1136	(ABC) transporter
BCE_3089	COG0456	acetyltransferase
BCE_3093	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BCE_3102	COG0730	response to heat
BCE_3104	COG0833	amino acid
BCE_3106	COG0789	Transcriptional regulator
BCE_3106	COG4978	Transcriptional regulator
BCE_3108	COG0384	phenazine biosynthesis protein PhzF
BCE_3120	COG1984	allophanate hydrolase subunit 2
BCE_3121	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
BCE_3122	COG1414	Transcriptional regulator
BCE_3124	COG3142	Participates in the control of copper homeostasis
BCE_3125	COG0860	N-Acetylmuramoyl-L-alanine amidase
BCE_3126	COG1960	acyl-CoA dehydrogenase activity
BCE_3134	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
BCE_3137	COG0574	Belongs to the PEP-utilizing enzyme family
BCE_3137	COG3848	Pyruvate phosphate dikinase
BCE_3139	COG1819	glycosyl
BCE_3140	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BCE_3145	COG1063	alcohol dehydrogenase
BCE_3148	COG4974	Belongs to the 'phage' integrase family
BCE_3154	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BCE_3157	COG0737	Belongs to the 5'-nucleotidase family
BCE_3158	COG2267	carboxylic ester hydrolase activity
BCE_3160	COG1335	isochorismatase
BCE_3164	COG0583	DNA-binding transcription factor activity
BCE_3166	COG0598	Magnesium transport protein CorA
BCE_3175	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BCE_3178	COG2205	protein histidine kinase activity
BCE_3179	COG0745	RESPONSE REGULATOR receiver
BCE_3180	COG4990	cell redox homeostasis
BCE_3184	COG0415	Belongs to the DNA photolyase family
BCE_3186	COG2814	Major facilitator Superfamily
BCE_3188	COG0657	acetylesterase activity
BCE_3189	COG0288	reversible hydration of carbon dioxide
BCE_3191	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BCE_3193	COG5609	conserved protein (DUF2294)
BCE_3194	COG2814	Major facilitator Superfamily
BCE_3196	COG0726	polysaccharide deacetylase
BCE_3198	COG1575	Belongs to the MenA family. Type 1 subfamily
BCE_3202	COG4641	Protein conserved in bacteria
BCE_3205	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BCE_3208	COG0798	PFAM Bile acid sodium symporter
BCE_3209	COG0346	lactoylglutathione lyase activity
BCE_3210	COG0640	Transcriptional regulator
BCE_3214	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
BCE_3219	COG1136	(ABC) transporter
BCE_3227	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BCE_3227	COG3320	Male sterility
BCE_3232	COG0346	lactoylglutathione lyase activity
BCE_3240	COG2814	Major facilitator Superfamily
BCE_3242	COG4895	conserved protein (DUF2196)
BCE_3248	COG1063	alcohol dehydrogenase
BCE_3250	COG2124	cytochrome p450
BCE_3251	COG2124	cytochrome p450
BCE_3252	COG2124	cytochrome p450
BCE_3261	COG2515	1-aminocyclopropane-1-carboxylate deaminase
BCE_3264	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
BCE_3268	COG0577	efflux transmembrane transporter activity
BCE_3271	COG3850	Histidine kinase
BCE_3271	COG5002	protein histidine kinase activity
BCE_3273	COG2364	Membrane
BCE_3274	COG1846	Transcriptional regulator
BCE_3275	COG0456	acetyltransferase
BCE_3276	COG2808	Putative FMN-binding domain
BCE_3277	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BCE_3281	COG1619	proteins homologs of microcin C7 resistance protein MccF
BCE_3284	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BCE_3295	COG5632	N-Acetylmuramoyl-L-alanine amidase
BCE_3295	COG3409	Peptidoglycan-binding domain 1 protein
BCE_3305	COG0477	Major facilitator Superfamily
BCE_3308	COG1846	Transcriptional regulator
BCE_3309	COG2814	Major facilitator Superfamily
BCE_3312	COG2076	Multidrug Resistance protein
BCE_3313	COG1309	transcriptional regulator
BCE_3315	COG2031	fatty acid transporter
BCE_3317	COG2249	NAD(P)H dehydrogenase (quinone) activity
BCE_3324	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BCE_3328	COG1288	antiporter activity
BCE_3336	COG3316	Transposase and inactivated derivatives
BCE_3345	COG3344	reverse transcriptase
BCE_3347	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BCE_3355	COG1028	Short-chain dehydrogenase reductase Sdr
BCE_3357	COG1131	(ABC) transporter
BCE_3362	COG1011	Hydrolase
BCE_3372	COG0346	lactoylglutathione lyase activity
BCE_3373	COG1940	carbohydrate kinase activity
BCE_3375	COG0110	maltose O-acetyltransferase activity
BCE_3376	COG0180	Tryptophanyl-tRNA synthetase
BCE_3380	COG0628	permease
BCE_3384	COG1720	tRNA m6t6A37 methyltransferase activity
BCE_3385	COG2226	methyltransferase
BCE_3387	COG0477	Major facilitator Superfamily
BCE_3392	COG1253	flavin adenine dinucleotide binding
BCE_3393	COG0789	Transcriptional regulator
BCE_3395	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
BCE_3401	COG0697	spore germination
BCE_3405	COG3813	Protein conserved in bacteria
BCE_3406	COG2706	6-phosphogluconolactonase activity
BCE_3407	COG1070	Carbohydrate kinase
BCE_3409	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
BCE_3410	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
BCE_3412	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
BCE_3416	COG0814	amino acid
BCE_3424	COG2188	Transcriptional regulator
BCE_3425	COG0673	inositol 2-dehydrogenase activity
BCE_3428	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BCE_3431	COG0384	phenazine biosynthesis protein PhzF
BCE_3436	COG0318	PFAM AMP-dependent synthetase and ligase
BCE_3437	COG2249	NAD(P)H dehydrogenase (quinone) activity
BCE_3438	COG1733	regulation of RNA biosynthetic process
BCE_3441	COG1191	sigma factor activity
BCE_3445	COG0494	nUDIX hydrolase
BCE_3450	COG1151	hydroxylamine reductase activity
BCE_3452	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BCE_3459	COG2072	flavoprotein involved in K transport
BCE_3469	COG1695	Transcriptional regulator
BCE_3470	COG0604	alcohol dehydrogenase
BCE_3471	COG1113	amino acid transport
BCE_3477	COG2814	Major facilitator Superfamily
BCE_3480	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
BCE_3482	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
BCE_3485	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BCE_3486	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BCE_3487	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BCE_3488	COG3739	integral membrane protein
BCE_3495	COG0583	DNA-binding transcription factor activity
BCE_3499	COG1193	negative regulation of DNA recombination
BCE_3501	COG2162	N-hydroxyarylamine O-acetyltransferase activity
BCE_3502	COG1164	Oligoendopeptidase f
BCE_3507	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BCE_3514	COG0584	glycerophosphoryl diester phosphodiesterase
BCE_3516	COG3973	AAA domain
BCE_3520	COG0640	Transcriptional regulator
BCE_3521	COG0604	alcohol dehydrogenase
BCE_3523	COG0457	Tetratricopeptide repeat
BCE_3527	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
BCE_3529	COG0385	Bile acid
BCE_3530	COG0277	FAD linked oxidase domain protein
BCE_3533	COG0825	malonyl-CoA metabolic process
BCE_3541	COG1285	pathogenesis
BCE_3544	COG2514	catechol 2,3-dioxygenase activity
BCE_3545	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BCE_3546	COG1126	abc transporter atp-binding protein
BCE_3547	COG0765	amino acid transport
BCE_3548	COG2720	vancomycin resistance protein
BCE_3553	COG1278	Cold shock
BCE_3555	COG0716	FMN binding
BCE_3557	COG0494	nUDIX hydrolase
BCE_3561	COG1028	Short-chain dehydrogenase reductase Sdr
BCE_3564	COG0165	Argininosuccinate lyase
BCE_3567	COG4145	pantothenate transmembrane transporter activity
BCE_3569	COG1012	belongs to the aldehyde dehydrogenase family
BCE_3570	COG1028	Short-chain dehydrogenase reductase Sdr
BCE_3572	COG1657	PFAM Prenyltransferase squalene oxidase
BCE_3573	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
BCE_3574	COG2962	Rard protein
BCE_3575	COG3326	Membrane
BCE_3578	COG0489	protein tyrosine kinase activity
BCE_3580	COG0314	molybdopterin synthase activity
BCE_3581	COG0303	'Molybdopterin
BCE_3582	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BCE_3583	COG2116	formate transmembrane transporter activity
BCE_3585	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
BCE_3586	COG5609	conserved protein (DUF2294)
BCE_3587	COG2427	Protein of unknown function (DUF1641)
BCE_3588	COG3383	formate dehydrogenase (NAD+) activity
BCE_3589	COG0697	spore germination
BCE_3590	COG0697	spore germination
BCE_3600	COG2226	methyltransferase
BCE_3601	COG4166	transmembrane transport
BCE_3602	COG4166	transmembrane transport
BCE_3603	COG4166	transmembrane transport
BCE_3604	COG1301	dicarboxylic acid transport
BCE_3605	COG1316	TRANSCRIPTIONal
BCE_3607	COG1595	DNA-templated transcription, initiation
BCE_3610	COG1131	(ABC) transporter
BCE_3615	COG0673	inositol 2-dehydrogenase activity
BCE_3616	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BCE_3617	COG0187	DNA topoisomerase II activity
BCE_3618	COG1832	CoA-binding protein
BCE_3619	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BCE_3620	COG0745	RESPONSE REGULATOR receiver
BCE_3625	COG4841	protein insertion into membrane
BCE_3626	COG0824	Thioesterase
BCE_3632	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BCE_3634	COG2274	protein secretion by the type I secretion system
BCE_3635	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
BCE_3637	COG0726	polysaccharide deacetylase
BCE_3641	COG2211	Major facilitator Superfamily
BCE_3643	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
BCE_3646	COG0183	Belongs to the thiolase family
BCE_3647	COG0318	PFAM AMP-dependent synthetase and ligase
BCE_3648	COG1268	BioY protein
BCE_3649	COG0318	PFAM AMP-dependent synthetase and ligase
BCE_3652	COG1396	sequence-specific DNA binding
BCE_3656	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
BCE_3660	COG0830	nickel cation binding
BCE_3668	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BCE_3670	COG5002	protein histidine kinase activity
BCE_3671	COG0400	carboxylic ester hydrolase activity
BCE_3672	COG0346	lactoylglutathione lyase activity
BCE_3673	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BCE_3674	COG0069	glutamate synthase activity
BCE_3675	COG1902	pentaerythritol trinitrate reductase activity
BCE_3676	COG1329	Transcriptional regulator
BCE_3677	COG0010	Belongs to the arginase family
BCE_3682	COG2226	methyltransferase
BCE_3691	COG3344	reverse transcriptase
BCE_3694	COG4846	Membrane protein involved in cytochrome C biogenesis
BCE_3695	COG0785	Cytochrome C biogenesis protein
BCE_3700	COG1131	(ABC) transporter
BCE_3702	COG0583	DNA-binding transcription factor activity
BCE_3704	COG1346	cytolysis
BCE_3708	COG0730	response to heat
BCE_3710	COG3409	Peptidoglycan-binding domain 1 protein
BCE_3710	COG5632	N-Acetylmuramoyl-L-alanine amidase
BCE_3714	COG1132	(ABC) transporter
BCE_3715	COG1132	(ABC) transporter
BCE_3721	COG3639	organic phosphonate transmembrane transporter activity
BCE_3723	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BCE_3724	COG0737	Belongs to the 5'-nucleotidase family
BCE_3726	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
BCE_3730	COG1695	Transcriptional regulator
BCE_3731	COG0174	glutamine synthetase
BCE_3732	COG0789	Transcriptional regulator
BCE_3733	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
BCE_3734	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BCE_3735	COG2860	membrane
BCE_3737	COG0464	growth
BCE_3743	COG1388	LysM domain
BCE_3743	COG3584	3D domain protein
BCE_3744	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BCE_3744	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BCE_3744	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BCE_3745	COG1105	Belongs to the carbohydrate kinase PfkB family
BCE_3746	COG1349	DNA-binding transcription factor activity
BCE_3747	COG1979	alcohol dehydrogenase
BCE_3748	COG2322	membrane
BCE_3751	COG1113	amino acid transport
BCE_3754	COG1408	metallophosphoesterase
BCE_3755	COG2116	formate transmembrane transporter activity
BCE_3758	COG2217	Heavy metal translocating P-type atpase
BCE_3759	COG2608	mercury ion transmembrane transporter activity
BCE_3761	COG1937	Protein conserved in bacteria
BCE_3763	COG1230	cation diffusion facilitator family transporter
BCE_3767	COG2819	hydrolase of the alpha beta superfamily
BCE_3768	COG1120	ATPase activity
BCE_3769	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BCE_3770	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BCE_3771	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BCE_3772	COG2169	Transcriptional regulator
BCE_3773	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BCE_3774	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
BCE_3776	COG2364	Membrane
BCE_3780	COG0346	lactoylglutathione lyase activity
BCE_3781	COG5001	Diguanylate cyclase
BCE_3781	COG3300	MHYT domain
BCE_3788	COG1346	cytolysis
BCE_3789	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BCE_3794	COG1404	Belongs to the peptidase S8 family
BCE_3795	COG3773	Cell wall hydrolase
BCE_3797	COG1368	sulfuric ester hydrolase activity
BCE_3798	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
BCE_3801	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
BCE_3805	COG4550	Control of competence regulator ComK, YlbF/YmcA
BCE_3808	COG1013	pyruvate-flavodoxin oxidoreductase activity
BCE_3809	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
BCE_3809	COG0674	pyruvate-flavodoxin oxidoreductase activity
BCE_3811	COG2359	stage V sporulation protein S
BCE_3812	COG1692	metallophosphoesterase
BCE_3816	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BCE_3817	COG1426	Protein conserved in bacteria
BCE_3820	COG0300	oxidoreductase activity
BCE_3821	COG0612	Peptidase, M16
BCE_3822	COG0612	Peptidase, M16
BCE_3827	COG2188	Transcriptional regulator
BCE_3828	COG1674	ftsk spoiiie
BCE_3831	COG0740	serine-type endopeptidase activity
BCE_3833	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BCE_3835	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BCE_3837	COG0527	aspartate kinase activity
BCE_3838	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BCE_3839	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BCE_3840	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BCE_3842	COG1873	PFAM PRC-barrel domain
BCE_3843	COG0612	Peptidase, M16
BCE_3844	COG0726	polysaccharide deacetylase
BCE_3847	COG0196	riboflavin kinase activity
BCE_3850	COG1550	Protein conserved in bacteria
BCE_3852	COG1358	cellular component organization or biogenesis
BCE_3853	COG2740	Nucleic-acid-binding protein implicated in transcription termination
BCE_3854	COG0195	Participates in both transcription termination and antitermination
BCE_3861	COG0750	zinc metalloprotease
BCE_3863	COG4589	Belongs to the CDS family
BCE_3866	COG0528	UMP kinase activity
BCE_3873	COG4974	Belongs to the 'phage' integrase family
BCE_3875	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BCE_3876	COG0758	DNA mediated transformation
BCE_3877	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
BCE_3885	COG1837	Belongs to the UPF0109 family
BCE_3887	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
BCE_3889	COG0552	protein localization to endoplasmic reticulum
BCE_3890	COG1196	nuclear chromosome segregation
BCE_3893	COG1028	Short-chain dehydrogenase reductase Sdr
BCE_3894	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
BCE_3897	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
BCE_3898	COG1461	Dihydroxyacetone kinase
BCE_3899	COG1302	Protein conserved in bacteria
BCE_3901	COG1564	THIamine pyrophosphokinase
BCE_3902	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
BCE_3904	COG2815	serine threonine protein kinase
BCE_3904	COG0515	serine threonine protein kinase
BCE_3905	COG0631	protein serine/threonine phosphatase activity
BCE_3907	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
BCE_3907	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
BCE_3910	COG0242	peptide deformylase activity
BCE_3911	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
BCE_3912	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BCE_3914	COG0194	GDP metabolic process
BCE_3916	COG1561	YicC-like family, N-terminal region
BCE_3917	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
BCE_3921	COG0006	proline dipeptidase activity
BCE_3925	COG3069	C4-dicarboxylate transmembrane transporter activity
BCE_3937	COG0564	pseudouridine synthase activity
BCE_3941	COG3599	regulation of cell shape
BCE_3942	COG2302	S4 RNA-binding domain
BCE_3943	COG0762	integral membrane protein
BCE_3945	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
BCE_3947	COG1873	PFAM PRC-barrel domain
BCE_3948	COG1191	sigma factor activity
BCE_3949	COG1191	sigma factor activity
BCE_3951	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
BCE_3952	COG0849	cell division
BCE_3954	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
BCE_3957	COG0772	Belongs to the SEDS family
BCE_3960	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BCE_3961	COG0768	penicillin binding
BCE_3963	COG4839	cell division protein FtsL
BCE_3966	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BCE_3970	COG1399	metal-binding, possibly nucleic acid-binding protein
BCE_3972	COG3480	Lon protease (S16) C-terminal proteolytic domain
BCE_3973	COG1752	Esterase of the alpha-beta hydrolase superfamily
BCE_3975	COG3314	Sporulation integral membrane protein YlbJ
BCE_3977	COG0742	ribosomal rna small subunit methyltransferase
BCE_3980	COG3679	Belongs to the UPF0342 family
BCE_3981	COG0406	alpha-ribazole phosphatase activity
BCE_3984	COG2340	Cysteine-rich secretory protein family
BCE_3987	COG3336	cytochrome c oxidase
BCE_3990	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BCE_3994	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
BCE_3995	COG0772	Belongs to the SEDS family
BCE_3997	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
BCE_3998	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
BCE_4000	COG4896	Protein conserved in bacteria
BCE_4005	COG0483	inositol monophosphate 1-phosphatase activity
BCE_4009	COG1982	Orn Lys Arg decarboxylase major
BCE_4020	COG0022	dehydrogenase e1 component
BCE_4021	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
BCE_4023	COG0242	peptide deformylase activity
BCE_4024	COG0561	phosphatase activity
BCE_4026	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BCE_4027	COG0569	domain protein
BCE_4031	COG0583	DNA-binding transcription factor activity
BCE_4032	COG0517	IMP dehydrogenase activity
BCE_4034	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
BCE_4036	COG4703	Protein of unknown function (DUF1797)
BCE_4039	COG2200	EAL domain
BCE_4040	COG1028	Short-chain dehydrogenase reductase Sdr
BCE_4041	COG1408	metallophosphoesterase
BCE_4043	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
BCE_4051	COG2814	Major facilitator Superfamily
BCE_4055	COG3209	COG3209 Rhs family protein
BCE_4058	COG2205	protein histidine kinase activity
BCE_4060	COG0436	Aminotransferase
BCE_4061	COG1609	Transcriptional regulator
BCE_4062	COG3833	ABC-type maltose transport systems, permease component
BCE_4063	COG1175	transmembrane transport
BCE_4064	COG2182	Extracellular solute-binding protein
BCE_4066	COG0366	Alpha amylase catalytic
BCE_4067	COG3842	ATPase activity
BCE_4075	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
BCE_4076	COG0183	Belongs to the thiolase family
BCE_4083	COG1695	Transcriptional regulator
BCE_4084	COG1028	Short-chain dehydrogenase reductase Sdr
BCE_4088	COG4974	Belongs to the 'phage' integrase family
BCE_4091	COG1378	Sugar-specific transcriptional regulator TrmB
BCE_4092	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
BCE_4095	COG0531	amino acid
BCE_4101	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BCE_4102	COG0436	Aminotransferase
BCE_4109	COG2084	Dehydrogenase
BCE_4111	COG3706	GGDEF domain
BCE_4112	COG0778	Nitroreductase
BCE_4117	COG2190	(PTS) system
BCE_4117	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BCE_4117	COG1263	PTS System
BCE_4118	COG3711	transcriptional antiterminator
BCE_4122	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
BCE_4127	COG1547	Domain of unknown function (DUF309)
BCE_4128	COG0456	acetyltransferase
BCE_4131	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BCE_4132	COG4086	secreted protein
BCE_4133	COG0561	phosphatase activity
BCE_4134	COG0697	spore germination
BCE_4136	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BCE_4141	COG0733	neurotransmitter:sodium symporter activity
BCE_4145	COG1686	Belongs to the peptidase S11 family
BCE_4146	COG1725	Transcriptional regulator
BCE_4147	COG1131	(ABC) transporter
BCE_4150	COG1846	Transcriptional regulator
BCE_4153	COG0598	Magnesium transport protein CorA
BCE_4158	COG4974	Belongs to the 'phage' integrase family
BCE_4160	COG0735	belongs to the Fur family
BCE_4161	COG1300	Membrane
BCE_4165	COG0667	Aldo Keto reductase
BCE_4166	COG0656	L-ascorbic acid biosynthetic process
BCE_4167	COG0456	acetyltransferase
BCE_4167	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
BCE_4169	COG4085	toxin activity
BCE_4169	COG1525	nuclease
BCE_4169	COG0737	Belongs to the 5'-nucleotidase family
BCE_4171	COG0596	Alpha beta hydrolase
BCE_4172	COG2056	Na+-H+ antiporter family
BCE_4173	COG1609	Transcriptional regulator
BCE_4174	COG0456	acetyltransferase
BCE_4175	COG1073	alpha beta
BCE_4179	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BCE_4179	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BCE_4180	COG0307	riboflavin synthase, alpha
BCE_4185	COG4106	trans-aconitate 2-methyltransferase activity
BCE_4186	COG1073	alpha beta
BCE_4186	COG2226	methyltransferase
BCE_4189	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BCE_4194	COG0737	Belongs to the 5'-nucleotidase family
BCE_4196	COG1522	sequence-specific DNA binding
BCE_4200	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BCE_4205	COG0300	oxidoreductase activity
BCE_4206	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BCE_4207	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BCE_4208	COG1760	l-serine dehydratase
BCE_4209	COG1760	l-serine dehydratase
BCE_4213	COG1285	pathogenesis
BCE_4214	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BCE_4216	COG2195	Cleaves the N-terminal amino acid of tripeptides
BCE_4217	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BCE_4221	COG1376	ErfK ybiS ycfS ynhG family protein
BCE_4222	COG4129	membrane
BCE_4223	COG1126	abc transporter atp-binding protein
BCE_4224	COG0765	amino acid transport
BCE_4225	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BCE_4230	COG2323	membrane
BCE_4231	COG0772	Belongs to the SEDS family
BCE_4232	COG0508	dehydrogenase complex catalyzes the overall conversion of
BCE_4233	COG0022	dehydrogenase e1 component
BCE_4234	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
BCE_4235	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BCE_4237	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
BCE_4238	COG0280	phosphate acetyltransferase
BCE_4239	COG3290	protein histidine kinase activity
BCE_4239	COG3829	transcription factor binding
BCE_4241	COG0584	glycerophosphoryl diester phosphodiesterase
BCE_4242	COG3093	addiction module antidote protein HigA
BCE_4243	COG0745	RESPONSE REGULATOR receiver
BCE_4245	COG0750	zinc metalloprotease
BCE_4246	COG0497	DNA recombination
BCE_4248	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
BCE_4251	COG0142	geranyltranstransferase activity
BCE_4256	COG1302	Protein conserved in bacteria
BCE_4257	COG0439	Biotin carboxylase
BCE_4258	COG0511	ligase activity, forming carbon-carbon bonds
BCE_4266	COG3854	ATPases associated with a variety of cellular activities
BCE_4271	COG0006	proline dipeptidase activity
BCE_4274	COG3872	metal-dependent enzyme
BCE_4276	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BCE_4284	COG0095	Lipoate-protein ligase
BCE_4285	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BCE_4286	COG1609	Transcriptional regulator
BCE_4288	COG2076	Multidrug Resistance protein
BCE_4289	COG2076	Multidrug Resistance protein
BCE_4298	COG1131	(ABC) transporter
BCE_4299	COG1725	Transcriptional regulator
BCE_4306	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
BCE_4318	COG4970	Tfp pilus assembly protein FimT
BCE_4320	COG1459	type II secretion system
BCE_4321	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BCE_4332	COG0646	methionine synthase
BCE_4332	COG1410	methionine synthase
BCE_4333	COG0646	methionine synthase
BCE_4333	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
BCE_4336	COG0626	cystathionine gamma-synthase activity
BCE_4337	COG0626	cystathionine gamma-synthase activity
BCE_4341	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BCE_4343	COG1940	carbohydrate kinase activity
BCE_4344	COG4483	Protein conserved in bacteria
BCE_4345	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
BCE_4347	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
BCE_4348	COG0704	Plays a role in the regulation of phosphate uptake
BCE_4349	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
BCE_4350	COG0581	inorganic phosphate transmembrane transporter activity
BCE_4351	COG0573	inorganic phosphate transmembrane transporter activity
BCE_4352	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
BCE_4354	COG0477	Major facilitator Superfamily
BCE_4355	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
BCE_4359	COG0735	belongs to the Fur family
BCE_4360	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BCE_4361	COG1121	(ABC) transporter
BCE_4362	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BCE_4369	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
BCE_4370	COG2384	SAM-dependent methyltransferase
BCE_4371	COG2010	Cytochrome c
BCE_4372	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BCE_4374	COG0358	DNA primase activity
BCE_4377	COG0517	IMP dehydrogenase activity
BCE_4380	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
BCE_4381	COG0295	cytidine deaminase activity
BCE_4382	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
BCE_4384	COG1480	7TM receptor with intracellular HD hydrolase
BCE_4385	COG1702	phosphate starvation-inducible protein PhoH
BCE_4389	COG1610	YqeY-like protein
BCE_4391	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
BCE_4392	COG1385	rRNA (uridine-N3-)-methyltransferase activity
BCE_4398	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BCE_4399	COG1733	regulation of RNA biosynthetic process
BCE_4404	COG1466	dna polymerase III delta subunit
BCE_4406	COG2333	competence protein COMEC
BCE_4406	COG0658	competence protein
BCE_4407	COG2131	deaminase
BCE_4408	COG1596	polysaccharide export
BCE_4408	COG1555	photosystem II stabilization
BCE_4409	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BCE_4410	COG2226	methyltransferase
BCE_4411	COG0799	negative regulation of ribosome biogenesis
BCE_4412	COG1713	HD superfamily hydrolase involved in NAD metabolism
BCE_4414	COG1534	Rna-binding protein
BCE_4416	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
BCE_4417	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
BCE_4421	COG1191	sigma factor activity
BCE_4425	COG2357	RelA SpoT domain protein
BCE_4427	COG1785	Belongs to the alkaline phosphatase family
BCE_4430	COG2267	carboxylic ester hydrolase activity
BCE_4437	COG1404	Belongs to the peptidase S8 family
BCE_4439	COG3186	Phenylalanine-4-hydroxylase
BCE_4441	COG2514	catechol 2,3-dioxygenase activity
BCE_4442	COG2259	Doxx family
BCE_4450	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
BCE_4453	COG1012	belongs to the aldehyde dehydrogenase family
BCE_4453	COG1454	alcohol dehydrogenase
BCE_4454	COG0626	cystathionine gamma-synthase activity
BCE_4455	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
BCE_4460	COG0768	penicillin binding
BCE_4466	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
BCE_4473	COG0628	permease
BCE_4477	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
BCE_4480	COG1104	cysteine desulfurase activity
BCE_4481	COG1959	2 iron, 2 sulfur cluster binding
BCE_4482	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
BCE_4484	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
BCE_4491	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BCE_4493	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
BCE_4493	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
BCE_4494	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
BCE_4496	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BCE_4496	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BCE_4498	COG2244	polysaccharide biosynthetic process
BCE_4499	COG2323	membrane
BCE_4501	COG1862	Preprotein translocase
BCE_4508	COG0697	spore germination
BCE_4509	COG0640	Transcriptional regulator
BCE_4514	COG0157	Belongs to the NadC ModD family
BCE_4515	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
BCE_4516	COG1104	cysteine desulfurase activity
BCE_4517	COG1827	regulation of RNA biosynthetic process
BCE_4518	COG1902	pentaerythritol trinitrate reductase activity
BCE_4519	COG0640	Transcriptional regulator
BCE_4521	COG1012	belongs to the aldehyde dehydrogenase family
BCE_4524	COG2258	MOSC domain
BCE_4525	COG0077	Prephenate dehydratase
BCE_4526	COG0577	efflux transmembrane transporter activity
BCE_4527	COG0577	efflux transmembrane transporter activity
BCE_4528	COG1136	(ABC) transporter
BCE_4530	COG5002	protein histidine kinase activity
BCE_4531	COG0745	RESPONSE REGULATOR receiver
BCE_4533	COG3290	protein histidine kinase activity
BCE_4535	COG2868	ribosomal protein
BCE_4537	COG1530	ribonuclease E activity
BCE_4538	COG1994	Peptidase M50
BCE_4539	COG0739	heme binding
BCE_4540	COG2894	cell division
BCE_4543	COG1792	Involved in formation and maintenance of cell shape
BCE_4544	COG1077	Cell shape determining protein MreB Mrl
BCE_4548	COG0285	dihydrofolate synthase activity
BCE_4551	COG1388	LysM domain
BCE_4553	COG0113	porphobilinogen synthase activity
BCE_4554	COG1587	Uroporphyrinogen-III synthase
BCE_4556	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BCE_4558	COG1846	Transcriptional regulator
BCE_4559	COG1764	response to oxidative stress
BCE_4562	COG1067	ATP-dependent peptidase activity
BCE_4562	COG0470	DNA polymerase III
BCE_4575	COG5293	efflux transmembrane transporter activity
BCE_4577	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
BCE_4584	COG0622	Phosphoesterase
BCE_4587	COG5401	PFAM Sporulation and spore germination
BCE_4590	COG2814	Major facilitator Superfamily
BCE_4592	COG1309	transcriptional regulator
BCE_4594	COG2197	response regulator
BCE_4596	COG0419	ATPase involved in DNA repair
BCE_4610	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
BCE_4610	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
BCE_4626	COG2197	response regulator
BCE_4627	COG2233	PERMEase
BCE_4628	COG0402	S-adenosylhomocysteine deaminase activity
BCE_4629	COG0402	S-adenosylhomocysteine deaminase activity
BCE_4630	COG1983	PspC domain protein
BCE_4631	COG1396	sequence-specific DNA binding
BCE_4632	COG0697	spore germination
BCE_4634	COG1959	2 iron, 2 sulfur cluster binding
BCE_4635	COG1668	transmembrane transport
BCE_4636	COG4152	abc transporter atp-binding protein
BCE_4638	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
BCE_4639	COG1360	Flagellar Motor Protein
BCE_4640	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
BCE_4641	COG1876	peptidase activity
BCE_4642	COG0824	Thioesterase
BCE_4643	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
BCE_4644	COG1053	succinate dehydrogenase
BCE_4645	COG2009	succinate dehydrogenase
BCE_4646	COG1719	4-vinyl reductase, 4VR
BCE_4648	COG3118	belongs to the thioredoxin family
BCE_4649	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
BCE_4650	COG2086	electron transfer activity
BCE_4651	COG1024	Enoyl-CoA hydratase
BCE_4652	COG1309	transcriptional regulator
BCE_4653	COG0318	PFAM AMP-dependent synthetase and ligase
BCE_4655	COG2318	DinB family
BCE_4660	COG1131	(ABC) transporter
BCE_4661	COG2205	protein histidine kinase activity
BCE_4662	COG0745	RESPONSE REGULATOR receiver
BCE_4664	COG4895	conserved protein (DUF2196)
BCE_4665	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
BCE_4667	COG4509	Sortase family
BCE_4668	COG1120	ATPase activity
BCE_4671	COG5386	Cell surface protein
BCE_4672	COG5386	Cell surface protein
BCE_4673	COG1114	Component of the transport system for branched-chain amino acids
BCE_4674	COG1187	pseudouridine synthase activity
BCE_4679	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
BCE_4679	COG1796	DNA polymerase
BCE_4680	COG1286	toxin biosynthetic process
BCE_4688	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BCE_4690	COG1418	mRNA catabolic process
BCE_4691	COG1662	PFAM IS1 transposase
BCE_4692	COG1418	mRNA catabolic process
BCE_4699	COG2814	Major facilitator Superfamily
BCE_4700	COG1566	PFAM secretion protein HlyD family protein
BCE_4701	COG1309	transcriptional regulator
BCE_4702	COG1363	Peptidase, m42
BCE_4706	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
BCE_4707	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
BCE_4709	COG1484	DNA-dependent DNA replication
BCE_4710	COG3611	Membrane attachment protein
BCE_4712	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
BCE_4714	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BCE_4716	COG1971	Probably functions as a manganese efflux pump
BCE_4718	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BCE_4718	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BCE_4719	COG5002	protein histidine kinase activity
BCE_4720	COG0745	RESPONSE REGULATOR receiver
BCE_4724	COG0538	isocitrate dehydrogenase activity
BCE_4725	COG0372	Belongs to the citrate synthase family
BCE_4727	COG0628	permease
BCE_4728	COG3030	protein affecting phage T7 exclusion by the F plasmid
BCE_4733	COG1725	Transcriptional regulator
BCE_4734	COG0281	malic enzyme
BCE_4735	COG0587	DNA-directed DNA polymerase activity
BCE_4738	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
BCE_4742	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
BCE_4744	COG4109	DRTGG domain
BCE_4748	COG0006	proline dipeptidase activity
BCE_4755	COG0662	Cupin 2, conserved barrel domain protein
BCE_4759	COG1028	Short-chain dehydrogenase reductase Sdr
BCE_4760	COG0589	response to stress
BCE_4769	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BCE_4774	COG0827	DNA restriction-modification system
BCE_4775	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
BCE_4776	COG3874	Sporulation protein YtfJ
BCE_4779	COG1574	metal-dependent hydrolase with the TIM-barrel fold
BCE_4781	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BCE_4785	COG1104	cysteine desulfurase activity
BCE_4787	COG0583	DNA-binding transcription factor activity
BCE_4788	COG0697	spore germination
BCE_4789	COG1309	transcriptional regulator
BCE_4790	COG1956	GAF domain-containing protein
BCE_4791	COG0626	cystathionine gamma-synthase activity
BCE_4798	COG1595	DNA-templated transcription, initiation
BCE_4801	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BCE_4802	COG0454	-acetyltransferase
BCE_4803	COG0517	IMP dehydrogenase activity
BCE_4804	COG0123	including yeast histone deacetylase and acetoin utilization protein
BCE_4813	COG1609	Transcriptional regulator
BCE_4816	COG4851	CamS sex pheromone cAM373 precursor
BCE_4817	COG3118	belongs to the thioredoxin family
BCE_4820	COG2309	aminopeptidase activity
BCE_4825	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BCE_4826	COG0697	spore germination
BCE_4827	COG0789	Transcriptional regulator
BCE_4828	COG1695	Transcriptional regulator
BCE_4832	COG1674	ftsk spoiiie
BCE_4834	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BCE_4836	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BCE_4837	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
BCE_4838	COG1363	Peptidase, m42
BCE_4840	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BCE_4843	COG0510	thiamine kinase activity
BCE_4844	COG1523	belongs to the glycosyl hydrolase 13 family
BCE_4846	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BCE_4847	COG1349	DNA-binding transcription factor activity
BCE_4848	COG1187	pseudouridine synthase activity
BCE_4849	COG2244	polysaccharide biosynthetic process
BCE_4850	COG2081	HI0933 family
BCE_4851	COG2814	Major facilitator Superfamily
BCE_4853	COG3832	glyoxalase III activity
BCE_4857	COG1329	Transcriptional regulator
BCE_4862	COG0314	molybdopterin synthase activity
BCE_4863	COG1763	Mo-molybdopterin cofactor biosynthetic process
BCE_4864	COG0303	'Molybdopterin
BCE_4866	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BCE_4867	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
BCE_4871	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BCE_4873	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
BCE_4883	COG2814	Major facilitator Superfamily
BCE_4884	COG0475	glutathione-regulated potassium exporter activity
BCE_4885	COG0490	domain, Protein
BCE_4886	COG0582	viral genome integration into host DNA
BCE_4888	COG1136	(ABC) transporter
BCE_4892	COG1242	4 iron, 4 sulfur cluster binding
BCE_4893	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
BCE_4894	COG1131	(ABC) transporter
BCE_4895	COG1794	racemase activity, acting on amino acids and derivatives
BCE_4898	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
BCE_4900	COG1752	Esterase of the alpha-beta hydrolase superfamily
BCE_4904	COG2267	carboxylic ester hydrolase activity
BCE_4905	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
BCE_4906	COG0671	phosphoesterase, PA-phosphatase related
BCE_4907	COG0438	transferase activity, transferring glycosyl groups
BCE_4909	COG0521	Mo-molybdopterin cofactor biosynthetic process
BCE_4913	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BCE_4922	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
BCE_4926	COG5002	protein histidine kinase activity
BCE_4927	COG4191	Histidine kinase
BCE_4929	COG2267	carboxylic ester hydrolase activity
BCE_4930	COG1368	sulfuric ester hydrolase activity
BCE_4935	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BCE_4936	COG1116	anion transmembrane transporter activity
BCE_4937	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BCE_4942	COG0494	nUDIX hydrolase
BCE_4948	COG0288	reversible hydration of carbon dioxide
BCE_4949	COG1271	oxidase subunit
BCE_4950	COG1294	oxidase, subunit
BCE_4955	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BCE_4961	COG1842	Phage shock protein A
BCE_4968	COG5002	protein histidine kinase activity
BCE_4969	COG0745	RESPONSE REGULATOR receiver
BCE_4976	COG1597	lipid kinase activity
BCE_4982	COG0586	Pfam SNARE associated Golgi protein
BCE_4984	COG0577	efflux transmembrane transporter activity
BCE_4985	COG1136	(ABC) transporter
BCE_4986	COG3708	Transcriptional regulator
BCE_4986	COG2207	Transcriptional regulator
BCE_4987	COG5658	integral membrane protein
BCE_4988	COG0640	Transcriptional regulator
BCE_4989	COG0745	RESPONSE REGULATOR receiver
BCE_4990	COG2205	protein histidine kinase activity
BCE_4991	COG0577	efflux transmembrane transporter activity
BCE_4992	COG0577	efflux transmembrane transporter activity
BCE_4993	COG1136	(ABC) transporter
BCE_4994	COG0577	efflux transmembrane transporter activity
BCE_5003	COG3964	amidohydrolase
BCE_5011	COG4948	Mandelate Racemase Muconate Lactonizing
BCE_5013	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
BCE_5014	COG0596	Alpha beta hydrolase
BCE_5016	COG1169	isochorismate synthase
BCE_5017	COG1575	Belongs to the MenA family. Type 1 subfamily
BCE_5018	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
BCE_5019	COG1278	Cold shock
BCE_5024	COG0058	SHG alpha-glucan phosphorylase activity
BCE_5026	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
BCE_5031	COG1404	Belongs to the peptidase S8 family
BCE_5034	COG1285	pathogenesis
BCE_5035	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
BCE_5038	COG2155	Conserved Protein
BCE_5039	COG1098	S1 RNA binding domain
BCE_5040	COG0436	Aminotransferase
BCE_5041	COG1522	sequence-specific DNA binding
BCE_5042	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BCE_5043	COG2267	carboxylic ester hydrolase activity
BCE_5045	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
BCE_5049	COG5018	Exonuclease
BCE_5050	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
BCE_5053	COG0423	glycine-tRNA ligase activity
BCE_5054	COG2050	protein possibly involved in aromatic compounds catabolism
BCE_5056	COG1268	BioY protein
BCE_5057	COG1210	Utp--glucose-1-phosphate uridylyltransferase
BCE_5058	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BCE_5061	COG3584	3D domain protein
BCE_5064	COG1252	NADH dehydrogenase
BCE_5066	COG3708	Transcriptional regulator
BCE_5069	COG1683	Conserved Protein
BCE_5073	COG0316	Belongs to the HesB IscA family
BCE_5076	COG1252	NADH dehydrogenase
BCE_5079	COG0390	transport system, permease component
BCE_5080	COG2824	Alkylphosphonate utilization operon protein PhnA
BCE_5085	COG4837	Protein of unknown function (DUF1462)
BCE_5086	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
BCE_5088	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
BCE_5089	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
BCE_5093	COG1358	cellular component organization or biogenesis
BCE_5095	COG2249	NAD(P)H dehydrogenase (quinone) activity
BCE_5096	COG0647	UMP catabolic process
BCE_5098	COG2445	Protein of unknown function DUF86
BCE_5099	COG1494	fructose-1,6-bisphosphatase
BCE_5102	COG4470	Protein conserved in bacteria
BCE_5104	COG0789	Transcriptional regulator
BCE_5105	COG4377	Putative membrane peptidase family (DUF2324)
BCE_5110	COG0739	heme binding
BCE_5112	COG3377	Domain of unknown function (DUF1805)
BCE_5113	COG0737	Belongs to the 5'-nucleotidase family
BCE_5114	COG1695	Transcriptional regulator
BCE_5116	COG0719	Fe-S assembly protein
BCE_5117	COG0822	iron-sulfur transferase activity
BCE_5118	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BCE_5119	COG0719	Fe-S assembly protein
BCE_5120	COG0396	ATPase activity
BCE_5122	COG1464	Belongs to the NlpA lipoprotein family
BCE_5123	COG1464	Belongs to the NlpA lipoprotein family
BCE_5124	COG2011	ABC-type metal ion transport system permease component
BCE_5127	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BCE_5128	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
BCE_5131	COG1393	Belongs to the ArsC family
BCE_5140	COG1309	transcriptional regulator
BCE_5141	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BCE_5142	COG1960	acyl-CoA dehydrogenase activity
BCE_5143	COG0183	Belongs to the thiolase family
BCE_5144	COG1024	Enoyl-CoA hydratase
BCE_5144	COG1250	3-hydroxyacyl-CoA dehydrogenase
BCE_5147	COG1686	Belongs to the peptidase S11 family
BCE_5150	COG0011	TIGRFAM Protein of
BCE_5151	COG0840	transmembrane signaling receptor activity
BCE_5156	COG2814	Major facilitator Superfamily
BCE_5157	COG0531	amino acid
BCE_5163	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BCE_5170	COG0586	Pfam SNARE associated Golgi protein
BCE_5172	COG1376	ErfK ybiS ycfS ynhG family protein
BCE_5173	COG0745	RESPONSE REGULATOR receiver
BCE_5174	COG5002	protein histidine kinase activity
BCE_5181	COG0840	transmembrane signaling receptor activity
BCE_5182	COG2151	metal-sulfur cluster biosynthetic enzyme
BCE_5183	COG3227	Zinc metalloprotease (Elastase)
BCE_5184	COG1741	Belongs to the pirin family
BCE_5187	COG0475	glutathione-regulated potassium exporter activity
BCE_5188	COG0490	domain, Protein
BCE_5190	COG1115	amino acid carrier protein
BCE_5191	COG0783	Belongs to the Dps family
BCE_5194	COG1611	Belongs to the LOG family
BCE_5198	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BCE_5199	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BCE_5200	COG1115	amino acid carrier protein
BCE_5201	COG1115	amino acid carrier protein
BCE_5202	COG2910	NAD(P)H-binding
BCE_5206	COG0656	L-ascorbic acid biosynthetic process
BCE_5207	COG2814	Major facilitator Superfamily
BCE_5208	COG1733	regulation of RNA biosynthetic process
BCE_5210	COG1252	NADH dehydrogenase
BCE_5214	COG3290	protein histidine kinase activity
BCE_5214	COG0840	transmembrane signaling receptor activity
BCE_5220	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BCE_5232	COG0557	exoribonuclease II activity
BCE_5233	COG1647	Serine aminopeptidase, S33
BCE_5234	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BCE_5235	COG1346	cytolysis
BCE_5242	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BCE_5245	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
BCE_5246	COG5294	Protein conserved in bacteria
BCE_5250	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BCE_5253	COG2323	membrane
BCE_5256	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BCE_5258	COG0391	Required for morphogenesis under gluconeogenic growth conditions
BCE_5260	COG1051	belongs to the nudix hydrolase family
BCE_5262	COG0492	ferredoxin-NADP+ reductase activity
BCE_5263	COG0457	Tetratricopeptide repeat
BCE_5264	COG0110	maltose O-acetyltransferase activity
BCE_5268	COG1950	PFAM Membrane protein of
BCE_5271	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
BCE_5275	COG0789	Transcriptional regulator
BCE_5280	COG0583	DNA-binding transcription factor activity
BCE_5282	COG0655	NAD(P)H dehydrogenase (quinone) activity
BCE_5283	COG0488	(ABC) transporter
BCE_5285	COG1132	(ABC) transporter
BCE_5286	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BCE_5288	COG0793	Belongs to the peptidase S41A family
BCE_5288	COG3409	Peptidoglycan-binding domain 1 protein
BCE_5289	COG2177	Part of the ABC transporter FtsEX involved in
BCE_5290	COG2884	Cell division ATP-binding protein ftsE
BCE_5296	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BCE_5298	COG1278	Cold shock
BCE_5299	COG1040	competence protein
BCE_5300	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
BCE_5301	COG0791	NLP P60 protein
BCE_5301	COG1388	LysM domain
BCE_5302	COG1733	regulation of RNA biosynthetic process
BCE_5304	COG1307	EDD domain protein, DegV family
BCE_5305	COG1739	Uncharacterized protein family UPF0029
BCE_5306	COG1316	TRANSCRIPTIONal
BCE_5307	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
BCE_5308	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
BCE_5311	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BCE_5313	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
BCE_5313	COG3933	PFAM sigma-54 factor interaction domain-containing protein
BCE_5314	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
BCE_5314	COG3933	PFAM sigma-54 factor interaction domain-containing protein
BCE_5318	COG1486	melibiose metabolic process
BCE_5319	COG1447	Phosphotransferase system cellobiose-specific component IIA
BCE_5320	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BCE_5324	COG1447	Phosphotransferase system cellobiose-specific component IIA
BCE_5326	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BCE_5327	COG1301	dicarboxylic acid transport
BCE_5329	COG0346	lactoylglutathione lyase activity
BCE_5334	COG1511	domain protein
BCE_5335	COG0583	DNA-binding transcription factor activity
BCE_5336	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
BCE_5338	COG1271	oxidase subunit
BCE_5339	COG1294	oxidase, subunit
BCE_5340	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
BCE_5342	COG1620	l-lactate permease
BCE_5345	COG2389	metal-binding protein
BCE_5348	COG1368	sulfuric ester hydrolase activity
BCE_5353	COG1388	LysM domain
BCE_5353	COG0791	NLP P60 protein
BCE_5354	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BCE_5356	COG1215	transferase activity, transferring glycosyl groups
BCE_5358	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BCE_5360	COG3584	3D domain protein
BCE_5360	COG1388	LysM domain
BCE_5363	COG4715	Zinc finger, swim domain protein
BCE_5364	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
BCE_5370	COG1191	sigma factor activity
BCE_5372	COG0577	efflux transmembrane transporter activity
BCE_5373	COG1136	(ABC) transporter
BCE_5378	COG2205	protein histidine kinase activity
BCE_5379	COG0745	RESPONSE REGULATOR receiver
BCE_5380	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
BCE_5381	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
BCE_5385	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
BCE_5387	COG1216	Glycosyl transferase, family 2
BCE_5387	COG1442	glycosyl transferase family 8
BCE_5390	COG0438	transferase activity, transferring glycosyl groups
BCE_5392	COG1215	transferase activity, transferring glycosyl groups
BCE_5393	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
BCE_5394	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
BCE_5395	COG1086	Polysaccharide biosynthesis protein
BCE_5396	COG1210	Utp--glucose-1-phosphate uridylyltransferase
BCE_5397	COG4464	protein tyrosine phosphatase activity
BCE_5398	COG0489	protein tyrosine kinase activity
BCE_5399	COG3944	biosynthesis protein
BCE_5400	COG0489	protein tyrosine kinase activity
BCE_5405	COG1609	Transcriptional regulator
BCE_5407	COG0739	heme binding
BCE_5410	COG3279	Response regulator of the LytR AlgR family
BCE_5411	COG2385	sporulation resulting in formation of a cellular spore
BCE_5414	COG4836	Membrane
BCE_5415	COG1007	ATP synthesis coupled electron transport
BCE_5416	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BCE_5417	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BCE_5419	COG0839	Belongs to the complex I subunit 6 family
BCE_5423	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BCE_5426	COG3300	MHYT domain
BCE_5426	COG5001	Diguanylate cyclase
BCE_5436	COG0356	it plays a direct role in the translocation of protons across the membrane
BCE_5443	COG0698	ribose 5-phosphate isomerase
BCE_5445	COG2190	(PTS) system
BCE_5446	COG2259	Doxx family
BCE_5447	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BCE_5452	COG0009	L-threonylcarbamoyladenylate synthase
BCE_5455	COG2890	protein-(glutamine-N5) methyltransferase activity
BCE_5456	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
BCE_5460	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
BCE_5462	COG1494	fructose-1,6-bisphosphatase
BCE_5463	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BCE_5467	COG4821	SIS domain
BCE_5472	COG1960	acyl-CoA dehydrogenase activity
BCE_5473	COG1960	acyl-CoA dehydrogenase activity
BCE_5474	COG1250	3-hydroxyacyl-CoA dehydrogenase
BCE_5475	COG0183	Belongs to the thiolase family
BCE_5476	COG0247	lactate metabolic process
BCE_5476	COG2181	nitrate reductase activity
BCE_5477	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BCE_5479	COG5001	Diguanylate cyclase
BCE_5479	COG3300	MHYT domain
BCE_5482	COG2197	response regulator
BCE_5483	COG4585	Histidine kinase
BCE_5484	COG0842	Transport permease protein
BCE_5485	COG1131	(ABC) transporter
BCE_5486	COG0024	Methionine aminopeptidase
BCE_5488	COG2234	aminopeptidase activity
BCE_5492	COG1595	DNA-templated transcription, initiation
BCE_5494	COG4506	Protein conserved in bacteria
BCE_5495	COG1619	proteins homologs of microcin C7 resistance protein MccF
BCE_5500	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
BCE_5501	COG2814	Major facilitator Superfamily
BCE_5502	COG0789	Transcriptional regulator
BCE_5503	COG0584	glycerophosphoryl diester phosphodiesterase
BCE_5504	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BCE_5506	COG1994	Peptidase M50
BCE_5508	COG1078	dGTPase activity
BCE_5509	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BCE_5510	COG1120	ATPase activity
BCE_5511	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BCE_5512	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BCE_5515	COG0095	Lipoate-protein ligase
BCE_5516	COG0280	phosphate acetyltransferase
BCE_5519	COG3773	Cell wall hydrolase
BCE_5521	COG2363	Small membrane protein
BCE_5523	COG0490	domain, Protein
BCE_5524	COG2233	PERMEase
BCE_5525	COG0561	phosphatase activity
BCE_5526	COG2814	Major facilitator Superfamily
BCE_5528	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
BCE_5529	COG1131	(ABC) transporter
BCE_5530	COG2755	lipolytic protein G-D-S-L family
BCE_5531	COG1609	Transcriptional regulator
BCE_5533	COG0460	homoserine dehydrogenase
BCE_5537	COG1011	Hydrolase
BCE_5538	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BCE_5540	COG2197	response regulator
BCE_5541	COG2203	Gaf domain
BCE_5541	COG4585	Histidine kinase
BCE_5542	COG0351	phosphomethylpyrimidine kinase
BCE_5543	COG3706	GGDEF domain
BCE_5544	COG2879	small protein
BCE_5545	COG1966	Carbon starvation protein
BCE_5546	COG3279	Response regulator of the LytR AlgR family
BCE_5547	COG0477	Major facilitator Superfamily
BCE_5549	COG0438	transferase activity, transferring glycosyl groups
BCE_5552	COG0840	transmembrane signaling receptor activity
BCE_5554	COG1607	acyl-coa hydrolase
BCE_5557	COG1216	Glycosyl transferase, family 2
BCE_5561	COG1216	Glycosyl transferase, family 2
BCE_5564	COG0488	(ABC) transporter
BCE_5565	COG1696	Membrane protein involved in D-alanine export
BCE_5567	COG1309	transcriptional regulator
BCE_5568	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BCE_5569	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BCE_5569	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BCE_5570	COG0628	permease
BCE_5573	COG3279	Response regulator of the LytR AlgR family
BCE_5574	COG3275	phosphorelay sensor kinase activity
BCE_5576	COG2814	Major facilitator Superfamily
BCE_5577	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BCE_5578	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
BCE_5579	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
BCE_5588	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
BCE_5590	COG1272	protein, Hemolysin III
BCE_5596	COG1164	Oligoendopeptidase f
BCE_5598	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
BCE_5610	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BCE_5611	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
BCE_5612	COG4853	Protein conserved in bacteria
BCE_5613	COG4863	YycH protein
BCE_5614	COG5002	protein histidine kinase activity
BCE_5615	COG0745	RESPONSE REGULATOR receiver
BCE_5618	COG0305	Participates in initiation and elongation during chromosome replication
BCE_5619	COG0305	Participates in initiation and elongation during chromosome replication
BCE_5621	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
BCE_5622	COG4241	membrane
BCE_5626	COG0012	GTP binding
BCE_5627	COG4481	Protein conserved in bacteria
BCE_5628	COG0668	transmembrane transport
BCE_5630	COG1475	DNA binding
BCE_5631	COG1192	Involved in chromosome partitioning
BCE_5636	COG1847	R3H domain protein
BCE_5637	COG0706	membrane insertase activity
BCE_A0001	COG4974	Belongs to the 'phage' integrase family
BCE_A0015	COG2311	Membrane
BCE_A0056	COG2801	Transposase and inactivated derivatives
BCE_A0057	COG2963	transposase activity
BCE_A0073	COG1674	ftsk spoiiie
BCE_A0075	COG3344	reverse transcriptase
BCE_A0120	COG3344	reverse transcriptase
BCE_A0146	COG1923	regulation of RNA biosynthetic process
BCE_A0148	COG0457	Tetratricopeptide repeat
BCE_A0151	COG4974	Belongs to the 'phage' integrase family
BCE_A0159	COG0798	PFAM Bile acid sodium symporter
BCE_A0160	COG0640	Transcriptional regulator
BCE_A0165	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
BCE_A0167	COG3620	sequence-specific DNA binding
BCE_A0168	COG0306	phosphate transporter
BCE_A0169	COG0640	Transcriptional regulator
BCE_A0172	COG1846	Transcriptional regulator
BCE_A0182	COG2217	Heavy metal translocating P-type atpase
BCE_A0183	COG1937	Protein conserved in bacteria
BCE_A0184	COG3443	Belongs to the bacterial solute-binding protein 9 family
BCE_A0184	COG0803	Belongs to the bacterial solute-binding protein 9 family
BCE_A0190	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BCE_A0205	COG3118	belongs to the thioredoxin family
BCE_A0210	COG1126	abc transporter atp-binding protein
BCE_A0211	COG2304	oxidoreductase activity
BCE_A0212	COG2132	Multicopper oxidase
BCE_A0213	COG0745	RESPONSE REGULATOR receiver
BCE_A0214	COG5002	protein histidine kinase activity
BCE_A0218	COG0860	N-Acetylmuramoyl-L-alanine amidase
BCE_A0232	COG4974	Belongs to the 'phage' integrase family
BCE_A0235	COG2002	toxin-antitoxin pair type II binding
BCE_A0241	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII