BCE_0001 SM00382 ATPases associated with a variety of cellular activities BCE_0001 SM00760 Bacterial dnaA protein helix-turn-helix domain BCE_0002 SM00480 DNA polymerase III beta subunit BCE_0005 SM00387 Histidine kinase-like ATPases BCE_0005 SM00433 TopoisomeraseII BCE_0006 SM00434 DNA Topoisomerase IV BCE_0009 SM00116 Domain in cystathionine beta-synthase and other proteins. BCE_0009 SM01240 BCE_0009 BCE_0010 SM00936 Penicillin-binding protein 5, C-terminal domain BCE_0020 SM00382 ATPases associated with a variety of cellular activities BCE_0022 SM00493 BCE_0022 BCE_0035 SM00966 SpoVT / AbrB like domain BCE_0038 SM00493 BCE_0038 BCE_0039 SM00650 Ribosomal RNA adenine dimethylases BCE_0048 SM01400 BCE_0048 BCE_0051 SM00487 DEAD-like helicases superfamily BCE_0051 SM00490 helicase superfamily c-terminal domain BCE_0051 SM00982 BCE_0051 BCE_0051 SM01058 CarD-like/TRCF domain BCE_0052 SM00966 SpoVT / AbrB like domain BCE_0055 SM00363 S4 RNA-binding domain BCE_0059 SM00316 Ribosomal protein S1-like RNA-binding domain BCE_0060 SM00331 Sigma factor PP2C-like phosphatases BCE_0060 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BCE_0061 SM00977 TilS substrate C-terminal domain BCE_0063 SM00382 ATPases associated with a variety of cellular activities BCE_0071 SM00905 Dihydroneopterin aldolase BCE_0073 SM00530 Helix-turn-helix XRE-family like proteins BCE_0081 SM00382 ATPases associated with a variety of cellular activities BCE_0081 SM01086 C-terminal, D2-small domain, of ClpB protein BCE_0082 SM00382 ATPases associated with a variety of cellular activities BCE_0084 SM00670 Large family of predicted nucleotide-binding domains BCE_0089 SM00840 BCE_0089 BCE_0090 SM00535 Ribonuclease III family BCE_0091 SM00967 RNA 2'-O ribose methyltransferase substrate binding BCE_0093 SM00421 helix_turn_helix, Lux Regulon BCE_0096 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BCE_0097 SM00649 Ribosomal protein L11/L12 BCE_0103 SM00663 RNA polymerase I subunit A N-terminus BCE_0107 SM00838 Elongation factor G C-terminus BCE_0107 SM00889 Elongation factor G, domain IV BCE_0109 SM01403 BCE_0109 BCE_0113 SM01382 BCE_0113 BCE_0113 SM01383 BCE_0113 BCE_0116 SM00322 K homology RNA-binding domain BCE_0120 SM01374 BCE_0120 BCE_0121 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BCE_0133 SM00316 Ribosomal protein S1-like RNA-binding domain BCE_0137 SM00662 RNA polymerases D BCE_0139 SM00382 ATPases associated with a variety of cellular activities BCE_0140 SM00382 ATPases associated with a variety of cellular activities BCE_0146 SM00646 BCE_0146 BCE_0149 SM01251 BCE_0149 BCE_0160 SM00491 BCE_0160 BCE_0162 SM00530 Helix-turn-helix XRE-family like proteins BCE_0167 SM00382 ATPases associated with a variety of cellular activities BCE_0196 SM00382 ATPases associated with a variety of cellular activities BCE_0196 SM00930 BCE_0196 BCE_0198 SM00829 Enoylreductase BCE_0207 SM00382 ATPases associated with a variety of cellular activities BCE_0208 SM00382 ATPases associated with a variety of cellular activities BCE_0211 SM00342 helix_turn_helix, arabinose operon control protein BCE_0230 SM00563 Phosphate acyltransferases BCE_0232 SM00354 helix_turn _helix lactose operon repressor BCE_0245 SM00382 ATPases associated with a variety of cellular activities BCE_0251 SM00382 ATPases associated with a variety of cellular activities BCE_0252 SM00382 ATPases associated with a variety of cellular activities BCE_0267 SM00487 DEAD-like helicases superfamily BCE_0267 SM00490 helicase superfamily c-terminal domain BCE_0272 SM01005 Alanine racemase, C-terminal domain BCE_0275 SM00316 Ribosomal protein S1-like RNA-binding domain BCE_0275 SM00732 Likely ribonuclease with RNase H fold. BCE_0277 SM00731 SprT homologues. BCE_0284 SM00382 ATPases associated with a variety of cellular activities BCE_0285 SM00881 CoA binding domain BCE_0288 SM00883 Chaperonin 10 Kd subunit BCE_0294 SM00448 cheY-homologous receiver domain BCE_0294 SM00862 Transcriptional regulatory protein, C terminal BCE_0295 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCE_0295 SM00387 Histidine kinase-like ATPases BCE_0295 SM00388 His Kinase A (phosphoacceptor) domain BCE_0317 SM01001 AIR carboxylase BCE_0319 SM00998 Adenylosuccinate lyase C-terminus BCE_0322 SM01211 BCE_0322 BCE_0327 SM00798 AICARFT/IMPCHase bienzyme BCE_0327 SM00851 MGS-like domain BCE_0328 SM01209 BCE_0328 BCE_0328 SM01210 BCE_0328 BCE_0330 SM00244 prohibitin homologues BCE_0335 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BCE_0335 SM00292 breast cancer carboxy-terminal domain BCE_0335 SM00532 Ligase N family BCE_0341 SM00382 ATPases associated with a variety of cellular activities BCE_0341 SM00930 BCE_0341 BCE_0347 SM00347 helix_turn_helix multiple antibiotic resistance protein BCE_0351 SM00845 GatB domain BCE_0352 SM00046 Diacylglycerol kinase catalytic domain (presumed) BCE_0355 SM00382 ATPases associated with a variety of cellular activities BCE_0364 SM00530 Helix-turn-helix XRE-family like proteins BCE_0371 SM00530 Helix-turn-helix XRE-family like proteins BCE_0377 SM00482 DNA polymerase A domain BCE_0385 SM00990 BCE_0385 BCE_0386 SM00487 DEAD-like helicases superfamily BCE_0389 SM00507 HNH nucleases BCE_0392 SM00470 ParB-like nuclease domain BCE_0415 SM00644 BCE_0415 BCE_0417 SM00857 Resolvase, N terminal domain BCE_0419 SM00857 Resolvase, N terminal domain BCE_0420 SM00422 helix_turn_helix, mercury resistance BCE_0427 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BCE_0427 SM00387 Histidine kinase-like ATPases BCE_0427 SM00388 His Kinase A (phosphoacceptor) domain BCE_0433 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BCE_0444 SM01007 Class II Aldolase and Adducin N-terminal domain BCE_0468 SM00062 Bacterial periplasmic substrate-binding proteins BCE_0468 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BCE_0469 SM00382 ATPases associated with a variety of cellular activities BCE_0470 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BCE_0470 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCE_0477 SM00100 Cyclic nucleotide-monophosphate binding domain BCE_0477 SM00419 helix_turn_helix, cAMP Regulatory protein BCE_0481 SM00642 Alpha-amylase domain BCE_0485 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BCE_0485 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BCE_0485 SM00493 BCE_0485 BCE_0489 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BCE_0489 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCE_0493 SM00382 ATPases associated with a variety of cellular activities BCE_0495 SM00382 ATPases associated with a variety of cellular activities BCE_0497 SM00060 Fibronectin type 3 domain BCE_0497 SM00636 BCE_0497 BCE_0497 SM00637 BCE_0497 BCE_0505 SM00530 Helix-turn-helix XRE-family like proteins BCE_0510 SM00946 Prolyl-tRNA synthetase, C-terminal BCE_0519 SM00831 Cation transporter/ATPase, N-terminus BCE_0521 SM00226 Low molecular weight phosphatase family BCE_0541 SM00478 endonuclease III BCE_0545 SM00382 ATPases associated with a variety of cellular activities BCE_0549 SM00530 Helix-turn-helix XRE-family like proteins BCE_0560 SM00984 UDP binding domain BCE_0577 SM00478 endonuclease III BCE_0577 SM00525 BCE_0577 BCE_0583 SM00382 ATPases associated with a variety of cellular activities BCE_0587 SM00382 ATPases associated with a variety of cellular activities BCE_0600 SM00567 E-Z type HEAT repeats BCE_0603 SM00052 Putative diguanylate phosphodiesterase BCE_0603 SM00091 PAS domain BCE_0603 SM00267 diguanylate cyclase BCE_0605 SM00763 PrkA AAA domain BCE_0607 SM00365 Leucine-rich repeat, SDS22-like subfamily BCE_0607 SM00369 Leucine-rich repeats, typical (most populated) subfamily BCE_0607 SM00725 NEAr Transporter domain BCE_0609 SM00062 Bacterial periplasmic substrate-binding proteins BCE_0610 SM00382 ATPases associated with a variety of cellular activities BCE_0616 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BCE_0618 SM00244 prohibitin homologues BCE_0619 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BCE_0619 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCE_0620 SM00091 PAS domain BCE_0620 SM00387 Histidine kinase-like ATPases BCE_0621 SM00448 cheY-homologous receiver domain BCE_0626 SM00248 ankyrin repeats BCE_0629 SM00382 ATPases associated with a variety of cellular activities BCE_0634 SM00448 cheY-homologous receiver domain BCE_0634 SM00862 Transcriptional regulatory protein, C terminal BCE_0635 SM00387 Histidine kinase-like ATPases BCE_0635 SM00388 His Kinase A (phosphoacceptor) domain BCE_0639 SM00387 Histidine kinase-like ATPases BCE_0640 SM00448 cheY-homologous receiver domain BCE_0642 SM00919 Malic enzyme, NAD binding domain BCE_0642 SM01274 BCE_0642 BCE_0646 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCE_0649 SM00387 Histidine kinase-like ATPases BCE_0649 SM00388 His Kinase A (phosphoacceptor) domain BCE_0650 SM00448 cheY-homologous receiver domain BCE_0650 SM00862 Transcriptional regulatory protein, C terminal BCE_0655 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BCE_0655 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BCE_0659 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BCE_0659 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BCE_0662 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCE_0665 SM00028 Tetratricopeptide repeats BCE_0665 SM00530 Helix-turn-helix XRE-family like proteins BCE_0676 SM01091 Transporter associated domain BCE_0680 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCE_0686 SM00382 ATPases associated with a variety of cellular activities BCE_0692 SM00327 von Willebrand factor (vWF) type A domain BCE_0693 SM00382 ATPases associated with a variety of cellular activities BCE_0694 SM00155 Phospholipase D. Active site motifs. BCE_0696 SM00052 Putative diguanylate phosphodiesterase BCE_0696 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BCE_0696 SM00091 PAS domain BCE_0696 SM00267 diguanylate cyclase BCE_0698 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCE_0698 SM00866 BCE_0698 BCE_0700 SM00642 Alpha-amylase domain BCE_0707 SM00382 ATPases associated with a variety of cellular activities BCE_0708 SM00062 Bacterial periplasmic substrate-binding proteins BCE_0708 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BCE_0718 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCE_0718 SM00387 Histidine kinase-like ATPases BCE_0718 SM00388 His Kinase A (phosphoacceptor) domain BCE_0719 SM00448 cheY-homologous receiver domain BCE_0719 SM00862 Transcriptional regulatory protein, C terminal BCE_0727 SM00382 ATPases associated with a variety of cellular activities BCE_0728 SM00382 ATPases associated with a variety of cellular activities BCE_0730 SM00347 helix_turn_helix multiple antibiotic resistance protein BCE_0732 SM00354 helix_turn _helix lactose operon repressor BCE_0735 SM00382 ATPases associated with a variety of cellular activities BCE_0742 SM00829 Enoylreductase BCE_0744 SM00770 Zinc dependent phospholipase C (alpha toxin) BCE_0751 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BCE_0753 SM00530 Helix-turn-helix XRE-family like proteins BCE_0764 SM00530 Helix-turn-helix XRE-family like proteins BCE_0783 SM00899 BCE_0783 BCE_0791 SM00116 Domain in cystathionine beta-synthase and other proteins. BCE_0794 SM00287 Bacterial SH3 domain homologues BCE_0796 SM00382 ATPases associated with a variety of cellular activities BCE_0814 SM00347 helix_turn_helix multiple antibiotic resistance protein BCE_0840 SM00487 DEAD-like helicases superfamily BCE_0840 SM00490 helicase superfamily c-terminal domain BCE_0845 SM00857 Resolvase, N terminal domain BCE_0849 SM00857 Resolvase, N terminal domain BCE_0850 SM00857 Resolvase, N terminal domain BCE_0855 SM00487 DEAD-like helicases superfamily BCE_0855 SM00490 helicase superfamily c-terminal domain BCE_0862 SM00347 helix_turn_helix multiple antibiotic resistance protein BCE_0866 SM00450 Rhodanese Homology Domain BCE_0867 SM00450 Rhodanese Homology Domain BCE_0867 SM00849 Metallo-beta-lactamase superfamily BCE_0869 SM00450 Rhodanese Homology Domain BCE_0870 SM00450 Rhodanese Homology Domain BCE_0877 SM00829 Enoylreductase BCE_0887 SM00287 Bacterial SH3 domain homologues BCE_0889 SM00382 ATPases associated with a variety of cellular activities BCE_0900 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen BCE_0920 SM00344 helix_turn_helix ASNC type BCE_0923 SM00422 helix_turn_helix, mercury resistance BCE_0942 SM00382 ATPases associated with a variety of cellular activities BCE_0943 SM00382 ATPases associated with a variety of cellular activities BCE_0945 SM00062 Bacterial periplasmic substrate-binding proteins BCE_0945 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BCE_0947 SM00382 ATPases associated with a variety of cellular activities BCE_0962 SM00644 BCE_0962 BCE_0964 SM00729 Elongator protein 3, MiaB family, Radical SAM BCE_0970 SM00957 SecA DEAD-like domain BCE_0984 SM00646 BCE_0984 BCE_0990 SM00342 helix_turn_helix, arabinose operon control protein BCE_0990 SM00871 Bacterial transcription activator, effector binding domain BCE_1003 SM00382 ATPases associated with a variety of cellular activities BCE_1004 SM00382 ATPases associated with a variety of cellular activities BCE_1009 SM00091 PAS domain BCE_1009 SM00387 Histidine kinase-like ATPases BCE_1010 SM00448 cheY-homologous receiver domain BCE_1019 SM00990 BCE_1019 BCE_1021 SM00487 DEAD-like helicases superfamily BCE_1021 SM00490 helicase superfamily c-terminal domain BCE_1026 SM00470 ParB-like nuclease domain BCE_1045 SM00347 helix_turn_helix multiple antibiotic resistance protein BCE_1054 SM01120 BCE_1054 BCE_1072 SM00460 Transglutaminase/protease-like homologues BCE_1088 SM00331 Sigma factor PP2C-like phosphatases BCE_1088 SM00448 cheY-homologous receiver domain BCE_1089 SM00138 Methyltransferase, chemotaxis proteins BCE_1090 SM00387 Histidine kinase-like ATPases BCE_1090 SM00388 His Kinase A (phosphoacceptor) domain BCE_1090 SM00448 cheY-homologous receiver domain BCE_1099 SM00829 Enoylreductase BCE_1101 SM00387 Histidine kinase-like ATPases BCE_1102 SM00421 helix_turn_helix, Lux Regulon BCE_1102 SM00448 cheY-homologous receiver domain BCE_1111 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BCE_1143 SM00028 Tetratricopeptide repeats BCE_1144 SM00028 Tetratricopeptide repeats BCE_1144 SM00382 ATPases associated with a variety of cellular activities BCE_1144 SM00671 Sel1-like repeats. BCE_1149 SM00347 helix_turn_helix multiple antibiotic resistance protein BCE_1152 SM00382 ATPases associated with a variety of cellular activities BCE_1186 SM00354 helix_turn _helix lactose operon repressor BCE_1188 SM00849 Metallo-beta-lactamase superfamily BCE_1195 SM00725 NEAr Transporter domain BCE_1199 SM00382 ATPases associated with a variety of cellular activities BCE_1213 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BCE_1216 SM00342 helix_turn_helix, arabinose operon control protein BCE_1216 SM00871 Bacterial transcription activator, effector binding domain BCE_1217 SM00387 Histidine kinase-like ATPases BCE_1217 SM00388 His Kinase A (phosphoacceptor) domain BCE_1218 SM00448 cheY-homologous receiver domain BCE_1218 SM00862 Transcriptional regulatory protein, C terminal BCE_1232 SM00357 Cold shock protein domain BCE_1238 SM00421 helix_turn_helix, Lux Regulon BCE_1238 SM00448 cheY-homologous receiver domain BCE_1261 SM01060 BCE_1261 BCE_1264 SM00831 Cation transporter/ATPase, N-terminus BCE_1268 SM00530 Helix-turn-helix XRE-family like proteins BCE_1270 SM00642 Alpha-amylase domain BCE_1271 SM00530 Helix-turn-helix XRE-family like proteins BCE_1274 SM00316 Ribosomal protein S1-like RNA-binding domain BCE_1287 SM00382 ATPases associated with a variety of cellular activities BCE_1287 SM01086 C-terminal, D2-small domain, of ClpB protein BCE_1294 SM00825 Beta-ketoacyl synthase BCE_1303 SM00382 ATPases associated with a variety of cellular activities BCE_1304 SM00382 ATPases associated with a variety of cellular activities BCE_1312 SM00155 Phospholipase D. Active site motifs. BCE_1318 SM01118 BCE_1318 BCE_1320 SM00954 Region found in RelA / SpoT proteins BCE_1352 SM00635 Bacterial Ig-like domain 2 BCE_1380 SM00861 Transketolase, pyrimidine binding domain BCE_1381 SM00530 Helix-turn-helix XRE-family like proteins BCE_1393 SM00530 Helix-turn-helix XRE-family like proteins BCE_1398 SM00382 ATPases associated with a variety of cellular activities BCE_1402 SM00014 Acid phosphatase homologues BCE_1413 SM00448 cheY-homologous receiver domain BCE_1413 SM00862 Transcriptional regulatory protein, C terminal BCE_1414 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCE_1414 SM00387 Histidine kinase-like ATPases BCE_1414 SM00388 His Kinase A (phosphoacceptor) domain BCE_1415 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCE_1415 SM00895 BCE_1415 BCE_1429 SM00822 BCE_1429 BCE_1437 SM00382 ATPases associated with a variety of cellular activities BCE_1442 SM00420 helix_turn_helix, Deoxyribose operon repressor BCE_1442 SM01134 BCE_1442 BCE_1444 SM00365 Leucine-rich repeat, SDS22-like subfamily BCE_1444 SM00369 Leucine-rich repeats, typical (most populated) subfamily BCE_1444 SM00725 NEAr Transporter domain BCE_1445 SM01007 Class II Aldolase and Adducin N-terminal domain BCE_1449 SM00387 Histidine kinase-like ATPases BCE_1449 SM00388 His Kinase A (phosphoacceptor) domain BCE_1450 SM00347 helix_turn_helix multiple antibiotic resistance protein BCE_1455 SM00387 Histidine kinase-like ATPases BCE_1455 SM00388 His Kinase A (phosphoacceptor) domain BCE_1472 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCE_1473 SM00382 ATPases associated with a variety of cellular activities BCE_1475 SM00382 ATPases associated with a variety of cellular activities BCE_1479 SM00344 helix_turn_helix ASNC type BCE_1506 SM00347 helix_turn_helix multiple antibiotic resistance protein BCE_1520 SM00917 LeuA allosteric (dimerisation) domain BCE_1521 SM01329 BCE_1521 BCE_1562 SM00387 Histidine kinase-like ATPases BCE_1563 SM00421 helix_turn_helix, Lux Regulon BCE_1563 SM00448 cheY-homologous receiver domain BCE_1583 SM00091 PAS domain BCE_1583 SM00387 Histidine kinase-like ATPases BCE_1583 SM00388 His Kinase A (phosphoacceptor) domain BCE_1587 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCE_1587 SM00387 Histidine kinase-like ATPases BCE_1587 SM00388 His Kinase A (phosphoacceptor) domain BCE_1597 SM00363 S4 RNA-binding domain BCE_1601 SM00448 cheY-homologous receiver domain BCE_1601 SM00862 Transcriptional regulatory protein, C terminal BCE_1602 SM00091 PAS domain BCE_1602 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCE_1602 SM00387 Histidine kinase-like ATPases BCE_1602 SM00388 His Kinase A (phosphoacceptor) domain BCE_1604 SM00257 Lysin motif BCE_1609 SM00487 DEAD-like helicases superfamily BCE_1610 SM00490 helicase superfamily c-terminal domain BCE_1612 SM00257 Lysin motif BCE_1614 SM00422 helix_turn_helix, mercury resistance BCE_1617 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BCE_1620 SM00644 BCE_1620 BCE_1622 SM00870 BCE_1622 BCE_1625 SM00316 Ribosomal protein S1-like RNA-binding domain BCE_1637 SM00411 bacterial (prokaryotic) histone like domain BCE_1642 SM00562 BCE_1642 BCE_1646 SM00028 Tetratricopeptide repeats BCE_1647 SM00914 BCE_1647 BCE_1657 SM00986 Uracil DNA glycosylase superfamily BCE_1657 SM00987 UreE urease accessory protein, C-terminal domain BCE_1662 SM00851 MGS-like domain BCE_1671 SM00479 BCE_1671 BCE_1671 SM00491 BCE_1671 BCE_1676 SM00478 endonuclease III BCE_1676 SM00525 BCE_1676 BCE_1678 SM00060 Fibronectin type 3 domain BCE_1690 SM00981 BCE_1690 BCE_1692 SM00491 BCE_1692 BCE_1705 SM00450 Rhodanese Homology Domain BCE_1707 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BCE_1707 SM00475 5'-3' exonuclease BCE_1720 SM00357 Cold shock protein domain BCE_1730 SM00849 Metallo-beta-lactamase superfamily BCE_1731 SM00422 helix_turn_helix, mercury resistance BCE_1731 SM00871 Bacterial transcription activator, effector binding domain BCE_1739 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCE_1748 SM00448 cheY-homologous receiver domain BCE_1749 SM00073 Histidine Phosphotransfer domain BCE_1749 SM00260 Two component signalling adaptor domain BCE_1749 SM00387 Histidine kinase-like ATPases BCE_1749 SM01231 BCE_1749 BCE_1754 SM00138 Methyltransferase, chemotaxis proteins BCE_1769 SM00382 ATPases associated with a variety of cellular activities BCE_1777 SM00260 Two component signalling adaptor domain BCE_1777 SM00448 cheY-homologous receiver domain BCE_1791 SM00382 ATPases associated with a variety of cellular activities BCE_1791 SM00962 SRP54-type protein, GTPase domain BCE_1793 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BCE_1807 SM00530 Helix-turn-helix XRE-family like proteins BCE_1811 SM00382 ATPases associated with a variety of cellular activities BCE_1814 SM00849 Metallo-beta-lactamase superfamily BCE_1814 SM01027 Beta-Casp domain BCE_1819 SM00835 Cupin BCE_1822 SM00855 Phosphoglycerate mutase family BCE_1834 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCE_1834 SM00895 BCE_1834 BCE_1836 SM00833 Cobalamin synthesis protein cobW C-terminal domain BCE_1854 SM00530 Helix-turn-helix XRE-family like proteins BCE_1863 SM00421 helix_turn_helix, Lux Regulon BCE_1863 SM00448 cheY-homologous receiver domain BCE_1865 SM00382 ATPases associated with a variety of cellular activities BCE_1869 SM00155 Phospholipase D. Active site motifs. BCE_1873 SM00919 Malic enzyme, NAD binding domain BCE_1873 SM01274 BCE_1873 BCE_1874 SM00387 Histidine kinase-like ATPases BCE_1875 SM00448 cheY-homologous receiver domain BCE_1877 SM00487 DEAD-like helicases superfamily BCE_1877 SM00490 helicase superfamily c-terminal domain BCE_1881 SM00530 Helix-turn-helix XRE-family like proteins BCE_1889 SM00646 BCE_1889 BCE_1890 SM00047 Lysozyme subfamily 2 BCE_1897 SM00382 ATPases associated with a variety of cellular activities BCE_1903 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCE_1903 SM00866 BCE_1903 BCE_1940 SM00854 Bacterial capsule synthesis protein PGA_cap BCE_1947 SM00850 LytTr DNA-binding domain BCE_1956 SM00448 cheY-homologous receiver domain BCE_1956 SM00862 Transcriptional regulatory protein, C terminal BCE_1957 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCE_1957 SM00387 Histidine kinase-like ATPases BCE_1957 SM00388 His Kinase A (phosphoacceptor) domain BCE_1961 SM00450 Rhodanese Homology Domain BCE_1975 SM01133 BCE_1975 BCE_1977 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BCE_1982 SM01011 Aminopeptidase P, N-terminal domain BCE_1984 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BCE_1984 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BCE_1984 SM00493 BCE_1984 BCE_1987 SM00382 ATPases associated with a variety of cellular activities BCE_1988 SM00382 ATPases associated with a variety of cellular activities BCE_2009 SM00833 Cobalamin synthesis protein cobW C-terminal domain BCE_2011 SM00382 ATPases associated with a variety of cellular activities BCE_2012 SM00382 ATPases associated with a variety of cellular activities BCE_2019 SM00347 helix_turn_helix multiple antibiotic resistance protein BCE_2023 SM00382 ATPases associated with a variety of cellular activities BCE_2024 SM00382 ATPases associated with a variety of cellular activities BCE_2037 SM00287 Bacterial SH3 domain homologues BCE_2040 SM00382 ATPases associated with a variety of cellular activities BCE_2041 SM00448 cheY-homologous receiver domain BCE_2041 SM00862 Transcriptional regulatory protein, C terminal BCE_2042 SM00387 Histidine kinase-like ATPases BCE_2042 SM00388 His Kinase A (phosphoacceptor) domain BCE_2059 SM00448 cheY-homologous receiver domain BCE_2059 SM00862 Transcriptional regulatory protein, C terminal BCE_2060 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCE_2060 SM00387 Histidine kinase-like ATPases BCE_2060 SM00388 His Kinase A (phosphoacceptor) domain BCE_2073 SM00460 Transglutaminase/protease-like homologues BCE_2077 SM00966 SpoVT / AbrB like domain BCE_2079 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCE_2088 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BCE_2088 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCE_2088 SM00319 Homologues of the ligand binding domain of Tar BCE_2101 SM00833 Cobalamin synthesis protein cobW C-terminal domain BCE_2113 SM00855 Phosphoglycerate mutase family BCE_2123 SM00155 Phospholipase D. Active site motifs. BCE_2128 SM01091 Transporter associated domain BCE_2146 SM00244 prohibitin homologues BCE_2149 SM00346 helix_turn_helix isocitrate lyase regulation BCE_2156 SM00859 Semialdehyde dehydrogenase, NAD binding domain BCE_2160 SM00855 Phosphoglycerate mutase family BCE_2163 SM01005 Alanine racemase, C-terminal domain BCE_2170 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCE_2189 SM00487 DEAD-like helicases superfamily BCE_2189 SM00490 helicase superfamily c-terminal domain BCE_2194 SM00829 Enoylreductase BCE_2203 SM00460 Transglutaminase/protease-like homologues BCE_2206 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BCE_2215 SM00894 Excalibur calcium-binding domain BCE_2224 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BCE_2225 SM00382 ATPases associated with a variety of cellular activities BCE_2231 SM00567 E-Z type HEAT repeats BCE_2235 SM01016 Arginyl tRNA synthetase N terminal dom BCE_2236 SM00836 DALR anticodon binding domain BCE_2240 SM00028 Tetratricopeptide repeats BCE_2258 SM00382 ATPases associated with a variety of cellular activities BCE_2270 SM00563 Phosphate acyltransferases BCE_2292 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BCE_2293 SM00421 helix_turn_helix, Lux Regulon BCE_2293 SM00448 cheY-homologous receiver domain BCE_2296 SM00829 Enoylreductase BCE_2300 SM00344 helix_turn_helix ASNC type BCE_2304 SM01350 BCE_2304 BCE_2313 SM00382 ATPases associated with a variety of cellular activities BCE_2325 SM00387 Histidine kinase-like ATPases BCE_2325 SM00388 His Kinase A (phosphoacceptor) domain BCE_2329 SM00882 Coenzyme A transferase BCE_2330 SM00882 Coenzyme A transferase BCE_2333 SM00382 ATPases associated with a variety of cellular activities BCE_2340 SM00219 Tyrosine kinase, catalytic domain BCE_2342 SM00014 Acid phosphatase homologues BCE_2393 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCE_2402 SM00823 Phosphopantetheine attachment site BCE_2402 SM00824 Thioesterase BCE_2403 SM00923 MbtH-like protein BCE_2407 SM00411 bacterial (prokaryotic) histone like domain BCE_2417 SM00363 S4 RNA-binding domain BCE_2419 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BCE_2420 SM00382 ATPases associated with a variety of cellular activities BCE_2433 SM00849 Metallo-beta-lactamase superfamily BCE_2438 SM00347 helix_turn_helix multiple antibiotic resistance protein BCE_2440 SM00849 Metallo-beta-lactamase superfamily BCE_2444 SM01059 Chloramphenicol acetyltransferase BCE_2454 SM00357 Cold shock protein domain BCE_2462 SM00347 helix_turn_helix multiple antibiotic resistance protein BCE_2465 SM00859 Semialdehyde dehydrogenase, NAD binding domain BCE_2474 SM00382 ATPases associated with a variety of cellular activities BCE_2475 SM00382 ATPases associated with a variety of cellular activities BCE_2481 SM00530 Helix-turn-helix XRE-family like proteins BCE_2487 SM00835 Cupin BCE_2500 SM01207 BCE_2500 BCE_2503 SM00347 helix_turn_helix multiple antibiotic resistance protein BCE_2506 SM00849 Metallo-beta-lactamase superfamily BCE_2509 SM00487 DEAD-like helicases superfamily BCE_2509 SM00490 helicase superfamily c-terminal domain BCE_2513 SM00382 ATPases associated with a variety of cellular activities BCE_2518 SM00347 helix_turn_helix multiple antibiotic resistance protein BCE_2520 SM00855 Phosphoglycerate mutase family BCE_2529 SM00936 Penicillin-binding protein 5, C-terminal domain BCE_2543 SM00382 ATPases associated with a variety of cellular activities BCE_2549 SM00878 Biotin carboxylase C-terminal domain BCE_2563 SM00387 Histidine kinase-like ATPases BCE_2563 SM00388 His Kinase A (phosphoacceptor) domain BCE_2564 SM00448 cheY-homologous receiver domain BCE_2564 SM00862 Transcriptional regulatory protein, C terminal BCE_2576 SM00382 ATPases associated with a variety of cellular activities BCE_2581 SM00871 Bacterial transcription activator, effector binding domain BCE_2589 SM00382 ATPases associated with a variety of cellular activities BCE_2592 SM00342 helix_turn_helix, arabinose operon control protein BCE_2617 SM00448 cheY-homologous receiver domain BCE_2617 SM00862 Transcriptional regulatory protein, C terminal BCE_2618 SM00387 Histidine kinase-like ATPases BCE_2620 SM00382 ATPases associated with a variety of cellular activities BCE_2621 SM00382 ATPases associated with a variety of cellular activities BCE_2627 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCE_2628 SM01209 BCE_2628 BCE_2662 SM00091 PAS domain BCE_2662 SM00387 Histidine kinase-like ATPases BCE_2662 SM00388 His Kinase A (phosphoacceptor) domain BCE_2668 SM00382 ATPases associated with a variety of cellular activities BCE_2671 SM00387 Histidine kinase-like ATPases BCE_2671 SM00388 His Kinase A (phosphoacceptor) domain BCE_2675 SM00448 cheY-homologous receiver domain BCE_2675 SM00862 Transcriptional regulatory protein, C terminal BCE_2676 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCE_2676 SM00387 Histidine kinase-like ATPases BCE_2676 SM00388 His Kinase A (phosphoacceptor) domain BCE_2677 SM00829 Enoylreductase BCE_2678 SM00014 Acid phosphatase homologues BCE_2679 SM00740 BCE_2679 BCE_2698 SM00422 helix_turn_helix, mercury resistance BCE_2708 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCE_2720 SM00480 DNA polymerase III beta subunit BCE_2734 SM00465 GIY-YIG type nucleases (URI domain) BCE_2749 SM00448 cheY-homologous receiver domain BCE_2749 SM00862 Transcriptional regulatory protein, C terminal BCE_2750 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCE_2750 SM00387 Histidine kinase-like ATPases BCE_2750 SM00388 His Kinase A (phosphoacceptor) domain BCE_2757 SM00382 ATPases associated with a variety of cellular activities BCE_2759 SM00014 Acid phosphatase homologues BCE_2761 SM00642 Alpha-amylase domain BCE_2764 SM00871 Bacterial transcription activator, effector binding domain BCE_2769 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCE_2770 SM00829 Enoylreductase BCE_2794 SM00382 ATPases associated with a variety of cellular activities BCE_2798 SM00420 helix_turn_helix, Deoxyribose operon repressor BCE_2798 SM01134 BCE_2798 BCE_2803 SM00861 Transketolase, pyrimidine binding domain BCE_2816 SM00116 Domain in cystathionine beta-synthase and other proteins. BCE_2816 SM00382 ATPases associated with a variety of cellular activities BCE_2824 SM00060 Fibronectin type 3 domain BCE_2824 SM00495 Chitin-binding domain type 3 BCE_2842 SM00341 Helicase and RNase D C-terminal BCE_2842 SM00487 DEAD-like helicases superfamily BCE_2842 SM00490 helicase superfamily c-terminal domain BCE_2842 SM00956 BCE_2842 BCE_2849 SM00646 BCE_2849 BCE_2854 SM01131 BCE_2854 BCE_2861 SM01130 BCE_2861 BCE_2865 SM00091 PAS domain BCE_2865 SM00382 ATPases associated with a variety of cellular activities BCE_2879 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BCE_2884 SM00248 ankyrin repeats BCE_2891 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BCE_2892 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCE_2892 SM00387 Histidine kinase-like ATPases BCE_2892 SM00388 His Kinase A (phosphoacceptor) domain BCE_2893 SM00448 cheY-homologous receiver domain BCE_2893 SM00862 Transcriptional regulatory protein, C terminal BCE_2903 SM00661 RNA polymerase subunit 9 BCE_2905 SM00344 helix_turn_helix ASNC type BCE_2944 SM00382 ATPases associated with a variety of cellular activities BCE_2945 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCE_2960 SM00062 Bacterial periplasmic substrate-binding proteins BCE_2961 SM00382 ATPases associated with a variety of cellular activities BCE_2967 SM00028 Tetratricopeptide repeats BCE_2988 SM00382 ATPases associated with a variety of cellular activities BCE_2998 SM00830 Chorismate mutase type II BCE_3005 SM00287 Bacterial SH3 domain homologues BCE_3015 SM00382 ATPases associated with a variety of cellular activities BCE_3019 SM01133 BCE_3019 BCE_3026 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCE_3029 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BCE_3033 SM00346 helix_turn_helix isocitrate lyase regulation BCE_3038 SM00098 Alkaline phosphatase homologues BCE_3040 SM00530 Helix-turn-helix XRE-family like proteins BCE_3044 SM00850 LytTr DNA-binding domain BCE_3059 SM01060 BCE_3059 BCE_3061 SM00382 ATPases associated with a variety of cellular activities BCE_3062 SM00062 Bacterial periplasmic substrate-binding proteins BCE_3064 SM00347 helix_turn_helix multiple antibiotic resistance protein BCE_3073 SM00382 ATPases associated with a variety of cellular activities BCE_3076 SM00347 helix_turn_helix multiple antibiotic resistance protein BCE_3077 SM00889 Elongation factor G, domain IV BCE_3083 SM00382 ATPases associated with a variety of cellular activities BCE_3088 SM00342 helix_turn_helix, arabinose operon control protein BCE_3088 SM00871 Bacterial transcription activator, effector binding domain BCE_3093 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCE_3106 SM00422 helix_turn_helix, mercury resistance BCE_3120 SM00797 Allophanate hydrolase subunit 2 BCE_3121 SM00796 Allophanate hydrolase subunit 1 BCE_3122 SM00346 helix_turn_helix isocitrate lyase regulation BCE_3140 SM00849 Metallo-beta-lactamase superfamily BCE_3178 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCE_3178 SM00387 Histidine kinase-like ATPases BCE_3178 SM00388 His Kinase A (phosphoacceptor) domain BCE_3179 SM00448 cheY-homologous receiver domain BCE_3179 SM00862 Transcriptional regulatory protein, C terminal BCE_3207 SM00226 Low molecular weight phosphatase family BCE_3210 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCE_3219 SM00382 ATPases associated with a variety of cellular activities BCE_3248 SM00829 Enoylreductase BCE_3267 SM00382 ATPases associated with a variety of cellular activities BCE_3269 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCE_3271 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCE_3271 SM00387 Histidine kinase-like ATPases BCE_3271 SM00388 His Kinase A (phosphoacceptor) domain BCE_3272 SM00448 cheY-homologous receiver domain BCE_3272 SM00862 Transcriptional regulatory protein, C terminal BCE_3274 SM00347 helix_turn_helix multiple antibiotic resistance protein BCE_3291 SM00421 helix_turn_helix, Lux Regulon BCE_3291 SM00448 cheY-homologous receiver domain BCE_3295 SM00644 BCE_3295 BCE_3308 SM00347 helix_turn_helix multiple antibiotic resistance protein BCE_3323 SM00382 ATPases associated with a variety of cellular activities BCE_3344 SM00530 Helix-turn-helix XRE-family like proteins BCE_3357 SM00382 ATPases associated with a variety of cellular activities BCE_3360 SM00530 Helix-turn-helix XRE-family like proteins BCE_3375 SM01266 BCE_3375 BCE_3392 SM01091 Transporter associated domain BCE_3393 SM00422 helix_turn_helix, mercury resistance BCE_3410 SM01350 BCE_3410 BCE_3411 SM00861 Transketolase, pyrimidine binding domain BCE_3420 SM00914 BCE_3420 BCE_3424 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCE_3424 SM00866 BCE_3424 BCE_3428 SM00849 Metallo-beta-lactamase superfamily BCE_3439 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCE_3443 SM00871 Bacterial transcription activator, effector binding domain BCE_3447 SM00382 ATPases associated with a variety of cellular activities BCE_3452 SM00849 Metallo-beta-lactamase superfamily BCE_3466 SM00849 Metallo-beta-lactamase superfamily BCE_3470 SM00829 Enoylreductase BCE_3496 SM00829 Enoylreductase BCE_3497 SM00855 Phosphoglycerate mutase family BCE_3499 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BCE_3499 SM00534 ATPase domain of DNA mismatch repair MUTS family BCE_3503 SM00422 helix_turn_helix, mercury resistance BCE_3503 SM00871 Bacterial transcription activator, effector binding domain BCE_3520 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCE_3521 SM00829 Enoylreductase BCE_3523 SM00028 Tetratricopeptide repeats BCE_3532 SM00347 helix_turn_helix multiple antibiotic resistance protein BCE_3539 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BCE_3545 SM00062 Bacterial periplasmic substrate-binding proteins BCE_3545 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BCE_3546 SM00382 ATPases associated with a variety of cellular activities BCE_3552 SM00479 BCE_3552 BCE_3553 SM00357 Cold shock protein domain BCE_3558 SM01022 BCE_3558 BCE_3570 SM00822 BCE_3570 BCE_3581 SM00852 Probable molybdopterin binding domain BCE_3584 SM00729 Elongator protein 3, MiaB family, Radical SAM BCE_3588 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BCE_3588 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BCE_3610 SM00382 ATPases associated with a variety of cellular activities BCE_3613 SM00420 helix_turn_helix, Deoxyribose operon repressor BCE_3616 SM00434 DNA Topoisomerase IV BCE_3617 SM00387 Histidine kinase-like ATPases BCE_3617 SM00433 TopoisomeraseII BCE_3618 SM00881 CoA binding domain BCE_3619 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BCE_3620 SM00448 cheY-homologous receiver domain BCE_3620 SM00862 Transcriptional regulatory protein, C terminal BCE_3624 SM01207 BCE_3624 BCE_3627 SM00257 Lysin motif BCE_3627 SM00636 BCE_3627 BCE_3631 SM00479 BCE_3631 BCE_3634 SM00382 ATPases associated with a variety of cellular activities BCE_3643 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BCE_3651 SM00382 ATPases associated with a variety of cellular activities BCE_3652 SM00530 Helix-turn-helix XRE-family like proteins BCE_3661 SM00988 UreE urease accessory protein, N-terminal domain BCE_3666 SM00644 BCE_3666 BCE_3666 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. BCE_3667 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BCE_3670 SM00091 PAS domain BCE_3670 SM00387 Histidine kinase-like ATPases BCE_3670 SM00388 His Kinase A (phosphoacceptor) domain BCE_3676 SM01058 CarD-like/TRCF domain BCE_3700 SM00382 ATPases associated with a variety of cellular activities BCE_3710 SM00644 BCE_3710 BCE_3713 SM00287 Bacterial SH3 domain homologues BCE_3713 SM00641 Glycosyl hydrolases family 25 BCE_3714 SM00382 ATPases associated with a variety of cellular activities BCE_3715 SM00382 ATPases associated with a variety of cellular activities BCE_3718 SM00861 Transketolase, pyrimidine binding domain BCE_3722 SM00382 ATPases associated with a variety of cellular activities BCE_3723 SM00062 Bacterial periplasmic substrate-binding proteins BCE_3726 SM00857 Resolvase, N terminal domain BCE_3731 SM01230 BCE_3731 BCE_3732 SM00422 helix_turn_helix, mercury resistance BCE_3737 SM00382 ATPases associated with a variety of cellular activities BCE_3743 SM00287 Bacterial SH3 domain homologues BCE_3746 SM00420 helix_turn_helix, Deoxyribose operon repressor BCE_3746 SM01134 BCE_3746 BCE_3753 SM00636 BCE_3753 BCE_3756 SM00411 bacterial (prokaryotic) histone like domain BCE_3765 SM00855 Phosphoglycerate mutase family BCE_3766 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCE_3768 SM00382 ATPases associated with a variety of cellular activities BCE_3772 SM00342 helix_turn_helix, arabinose operon control protein BCE_3774 SM00478 endonuclease III BCE_3778 SM00855 Phosphoglycerate mutase family BCE_3781 SM00052 Putative diguanylate phosphodiesterase BCE_3781 SM00091 PAS domain BCE_3781 SM00267 diguanylate cyclase BCE_3789 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCE_3793 SM00148 Phospholipase C, catalytic domain (part); domain X BCE_3795 SM00257 Lysin motif BCE_3802 SM00853 MutL C terminal dimerisation domain BCE_3802 SM01340 BCE_3802 BCE_3803 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BCE_3803 SM00534 ATPase domain of DNA mismatch repair MUTS family BCE_3806 SM00729 Elongator protein 3, MiaB family, Radical SAM BCE_3813 SM00322 K homology RNA-binding domain BCE_3813 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BCE_3815 SM00852 Probable molybdopterin binding domain BCE_3825 SM00382 ATPases associated with a variety of cellular activities BCE_3827 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCE_3827 SM00866 BCE_3827 BCE_3828 SM00382 ATPases associated with a variety of cellular activities BCE_3828 SM00843 BCE_3828 BCE_3833 SM00849 Metallo-beta-lactamase superfamily BCE_3836 SM01130 BCE_3836 BCE_3838 SM00859 Semialdehyde dehydrogenase, NAD binding domain BCE_3845 SM00316 Ribosomal protein S1-like RNA-binding domain BCE_3845 SM00322 K homology RNA-binding domain BCE_3846 SM01387 BCE_3846 BCE_3847 SM00904 Riboflavin kinase BCE_3854 SM00316 Ribosomal protein S1-like RNA-binding domain BCE_3854 SM00322 K homology RNA-binding domain BCE_3857 SM00507 HNH nucleases BCE_3859 SM00479 BCE_3859 BCE_3859 SM00481 DNA polymerase alpha chain like domain BCE_3861 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BCE_3870 SM01086 C-terminal, D2-small domain, of ClpB protein BCE_3875 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BCE_3875 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BCE_3875 SM00493 BCE_3875 BCE_3877 SM00881 CoA binding domain BCE_3887 SM00382 ATPases associated with a variety of cellular activities BCE_3887 SM00962 SRP54-type protein, GTPase domain BCE_3887 SM00963 SRP54-type protein, helical bundle domain BCE_3889 SM00382 ATPases associated with a variety of cellular activities BCE_3889 SM00962 SRP54-type protein, GTPase domain BCE_3889 SM00963 SRP54-type protein, helical bundle domain BCE_3890 SM00968 SMC proteins Flexible Hinge Domain BCE_3891 SM00358 Double-stranded RNA binding motif BCE_3891 SM00535 Ribonuclease III family BCE_3893 SM00822 BCE_3893 BCE_3894 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BCE_3897 SM00487 DEAD-like helicases superfamily BCE_3897 SM00490 helicase superfamily c-terminal domain BCE_3898 SM01120 BCE_3898 BCE_3898 SM01121 BCE_3898 BCE_3901 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain BCE_3904 SM00220 Serine/Threonine protein kinases, catalytic domain BCE_3904 SM00740 BCE_3904 BCE_3905 SM00331 Sigma factor PP2C-like phosphatases BCE_3905 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BCE_3911 SM00487 DEAD-like helicases superfamily BCE_3911 SM00490 helicase superfamily c-terminal domain BCE_3914 SM00072 Guanylate kinase homologues. BCE_3917 SM00831 Cation transporter/ATPase, N-terminus BCE_3928 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BCE_3931 SM00851 MGS-like domain BCE_3931 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BCE_3931 SM01209 BCE_3931 BCE_3932 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BCE_3937 SM00363 S4 RNA-binding domain BCE_3942 SM00363 S4 RNA-binding domain BCE_3951 SM00864 Tubulin/FtsZ family, GTPase domain BCE_3951 SM00865 Tubulin/FtsZ family, C-terminal domain BCE_3952 SM00842 Cell division protein FtsA BCE_3961 SM00740 BCE_3961 BCE_3962 SM00740 BCE_3962 BCE_3968 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains BCE_3972 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BCE_3981 SM00855 Phosphoglycerate mutase family BCE_3994 SM00878 Biotin carboxylase C-terminal domain BCE_3998 SM00670 Large family of predicted nucleotide-binding domains BCE_4003 SM00838 Elongation factor G C-terminus BCE_4020 SM00861 Transketolase, pyrimidine binding domain BCE_4026 SM00849 Metallo-beta-lactamase superfamily BCE_4039 SM00052 Putative diguanylate phosphodiesterase BCE_4058 SM00387 Histidine kinase-like ATPases BCE_4058 SM00388 His Kinase A (phosphoacceptor) domain BCE_4061 SM00354 helix_turn _helix lactose operon repressor BCE_4065 SM00642 Alpha-amylase domain BCE_4066 SM00642 Alpha-amylase domain BCE_4067 SM00382 ATPases associated with a variety of cellular activities BCE_4075 SM00382 ATPases associated with a variety of cellular activities BCE_4105 SM01007 Class II Aldolase and Adducin N-terminal domain BCE_4111 SM00267 diguanylate cyclase BCE_4118 SM01061 CAT RNA binding domain BCE_4120 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCE_4120 SM00866 BCE_4120 BCE_4123 SM00849 Metallo-beta-lactamase superfamily BCE_4143 SM00387 Histidine kinase-like ATPases BCE_4145 SM00936 Penicillin-binding protein 5, C-terminal domain BCE_4146 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCE_4147 SM00382 ATPases associated with a variety of cellular activities BCE_4150 SM00347 helix_turn_helix multiple antibiotic resistance protein BCE_4154 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BCE_4173 SM00354 helix_turn _helix lactose operon repressor BCE_4177 SM00704 CDGSH-type zinc finger. Function unknown. BCE_4184 SM00729 Elongator protein 3, MiaB family, Radical SAM BCE_4184 SM00876 Biotin and Thiamin Synthesis associated domain BCE_4196 SM00347 helix_turn_helix multiple antibiotic resistance protein BCE_4203 SM00859 Semialdehyde dehydrogenase, NAD binding domain BCE_4206 SM00849 Metallo-beta-lactamase superfamily BCE_4210 SM00849 Metallo-beta-lactamase superfamily BCE_4212 SM00831 Cation transporter/ATPase, N-terminus BCE_4223 SM00382 ATPases associated with a variety of cellular activities BCE_4225 SM00062 Bacterial periplasmic substrate-binding proteins BCE_4225 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BCE_4233 SM00861 Transketolase, pyrimidine binding domain BCE_4237 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BCE_4239 SM00091 PAS domain BCE_4239 SM00382 ATPases associated with a variety of cellular activities BCE_4243 SM00448 cheY-homologous receiver domain BCE_4245 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BCE_4248 SM00363 S4 RNA-binding domain BCE_4249 SM00861 Transketolase, pyrimidine binding domain BCE_4257 SM00878 Biotin carboxylase C-terminal domain BCE_4266 SM00382 ATPases associated with a variety of cellular activities BCE_4270 SM00841 Elongation factor P, C-terminal BCE_4270 SM01185 BCE_4270 BCE_4277 SM00529 Helix-turn-helix diphteria tox regulatory element BCE_4285 SM00450 Rhodanese Homology Domain BCE_4286 SM00354 helix_turn _helix lactose operon repressor BCE_4298 SM00382 ATPases associated with a variety of cellular activities BCE_4299 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCE_4306 SM00487 DEAD-like helicases superfamily BCE_4306 SM00490 helicase superfamily c-terminal domain BCE_4314 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. BCE_4332 SM01018 B12 binding domain BCE_4339 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCE_4341 SM00849 Metallo-beta-lactamase superfamily BCE_4349 SM00382 ATPases associated with a variety of cellular activities BCE_4361 SM00382 ATPases associated with a variety of cellular activities BCE_4364 SM00518 AP endonuclease family 2 BCE_4366 SM00487 DEAD-like helicases superfamily BCE_4366 SM00490 helicase superfamily c-terminal domain BCE_4374 SM00400 zinc finger BCE_4374 SM00493 BCE_4374 BCE_4374 SM00766 DNA primase DnaG DnaB-binding BCE_4377 SM00116 Domain in cystathionine beta-synthase and other proteins. BCE_4384 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BCE_4391 SM00729 Elongator protein 3, MiaB family, Radical SAM BCE_4394 SM00271 DnaJ molecular chaperone homology domain BCE_4398 SM00729 Elongator protein 3, MiaB family, Radical SAM BCE_4400 SM00838 Elongation factor G C-terminus BCE_4406 SM00849 Metallo-beta-lactamase superfamily BCE_4408 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BCE_4412 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BCE_4414 SM01103 BCE_4414 BCE_4425 SM00954 Region found in RelA / SpoT proteins BCE_4427 SM00098 Alkaline phosphatase homologues BCE_4433 SM00855 Phosphoglycerate mutase family BCE_4443 SM00530 Helix-turn-helix XRE-family like proteins BCE_4448 SM00382 ATPases associated with a variety of cellular activities BCE_4469 SM00732 Likely ribonuclease with RNase H fold. BCE_4471 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BCE_4478 SM00028 Tetratricopeptide repeats BCE_4482 SM00382 ATPases associated with a variety of cellular activities BCE_4491 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BCE_4491 SM00954 Region found in RelA / SpoT proteins BCE_4501 SM01323 BCE_4501 BCE_4505 SM00382 ATPases associated with a variety of cellular activities BCE_4506 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BCE_4509 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCE_4512 SM00257 Lysin motif BCE_4519 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCE_4522 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCE_4528 SM00382 ATPases associated with a variety of cellular activities BCE_4530 SM00387 Histidine kinase-like ATPases BCE_4531 SM00448 cheY-homologous receiver domain BCE_4531 SM00862 Transcriptional regulatory protein, C terminal BCE_4533 SM01317 BCE_4533 BCE_4551 SM00257 Lysin motif BCE_4553 SM01004 Delta-aminolevulinic acid dehydratase BCE_4558 SM00347 helix_turn_helix multiple antibiotic resistance protein BCE_4561 SM00382 ATPases associated with a variety of cellular activities BCE_4561 SM00464 Found in ATP-dependent protease La (LON) BCE_4562 SM00382 ATPases associated with a variety of cellular activities BCE_4563 SM00382 ATPases associated with a variety of cellular activities BCE_4563 SM00994 ClpX C4-type zinc finger BCE_4563 SM01086 C-terminal, D2-small domain, of ClpB protein BCE_4587 SM00909 Sporulation and spore germination BCE_4599 SM00857 Resolvase, N terminal domain BCE_4607 SM00857 Resolvase, N terminal domain BCE_4608 SM00857 Resolvase, N terminal domain BCE_4609 SM00530 Helix-turn-helix XRE-family like proteins BCE_4613 SM00530 Helix-turn-helix XRE-family like proteins BCE_4626 SM00421 helix_turn_helix, Lux Regulon BCE_4631 SM00530 Helix-turn-helix XRE-family like proteins BCE_4636 SM00382 ATPases associated with a variety of cellular activities BCE_4647 SM00465 GIY-YIG type nucleases (URI domain) BCE_4649 SM00893 Electron transfer flavoprotein domain BCE_4650 SM00893 Electron transfer flavoprotein domain BCE_4660 SM00382 ATPases associated with a variety of cellular activities BCE_4661 SM00387 Histidine kinase-like ATPases BCE_4661 SM00388 His Kinase A (phosphoacceptor) domain BCE_4662 SM00448 cheY-homologous receiver domain BCE_4662 SM00862 Transcriptional regulatory protein, C terminal BCE_4665 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BCE_4668 SM00382 ATPases associated with a variety of cellular activities BCE_4671 SM00725 NEAr Transporter domain BCE_4672 SM00725 NEAr Transporter domain BCE_4674 SM00363 S4 RNA-binding domain BCE_4678 SM00463 Small MutS-related domain BCE_4678 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BCE_4678 SM00534 ATPase domain of DNA mismatch repair MUTS family BCE_4679 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BCE_4679 SM00481 DNA polymerase alpha chain like domain BCE_4679 SM00483 DNA polymerase X family BCE_4686 SM00873 B3/4 domain BCE_4686 SM00874 tRNA synthetase B5 domain BCE_4686 SM00896 Ferredoxin-fold anticodon binding domain BCE_4688 SM00967 RNA 2'-O ribose methyltransferase substrate binding BCE_4707 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BCE_4709 SM00382 ATPases associated with a variety of cellular activities BCE_4714 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BCE_4717 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BCE_4717 SM01232 BCE_4717 BCE_4718 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BCE_4718 SM00474 3'-5' exonuclease BCE_4718 SM00475 5'-3' exonuclease BCE_4718 SM00482 DNA polymerase A domain BCE_4719 SM00091 PAS domain BCE_4719 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCE_4719 SM00387 Histidine kinase-like ATPases BCE_4719 SM00388 His Kinase A (phosphoacceptor) domain BCE_4720 SM00448 cheY-homologous receiver domain BCE_4720 SM00862 Transcriptional regulatory protein, C terminal BCE_4724 SM01329 BCE_4724 BCE_4733 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCE_4734 SM00919 Malic enzyme, NAD binding domain BCE_4734 SM01274 BCE_4734 BCE_4735 SM00481 DNA polymerase alpha chain like domain BCE_4744 SM00116 Domain in cystathionine beta-synthase and other proteins. BCE_4747 SM00849 Metallo-beta-lactamase superfamily BCE_4758 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BCE_4758 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BCE_4784 SM00981 BCE_4784 BCE_4793 SM00363 S4 RNA-binding domain BCE_4793 SM01390 BCE_4793 BCE_4796 SM00363 S4 RNA-binding domain BCE_4803 SM00116 Domain in cystathionine beta-synthase and other proteins. BCE_4813 SM00354 helix_turn _helix lactose operon repressor BCE_4827 SM00422 helix_turn_helix, mercury resistance BCE_4832 SM00382 ATPases associated with a variety of cellular activities BCE_4832 SM00843 BCE_4832 BCE_4840 SM00849 Metallo-beta-lactamase superfamily BCE_4844 SM00642 Alpha-amylase domain BCE_4847 SM00420 helix_turn_helix, Deoxyribose operon repressor BCE_4848 SM00363 S4 RNA-binding domain BCE_4852 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCE_4857 SM01058 CarD-like/TRCF domain BCE_4864 SM00852 Probable molybdopterin binding domain BCE_4867 SM00729 Elongator protein 3, MiaB family, Radical SAM BCE_4871 SM00450 Rhodanese Homology Domain BCE_4888 SM00382 ATPases associated with a variety of cellular activities BCE_4892 SM00729 Elongator protein 3, MiaB family, Radical SAM BCE_4906 SM00014 Acid phosphatase homologues BCE_4909 SM00852 Probable molybdopterin binding domain BCE_4926 SM00387 Histidine kinase-like ATPases BCE_4927 SM00387 Histidine kinase-like ATPases BCE_4927 SM00388 His Kinase A (phosphoacceptor) domain BCE_4936 SM00382 ATPases associated with a variety of cellular activities BCE_4947 SM01234 BCE_4947 BCE_4948 SM00947 Carbonic anhydrase BCE_4952 SM00894 Excalibur calcium-binding domain BCE_4966 SM00899 BCE_4966 BCE_4968 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCE_4968 SM00387 Histidine kinase-like ATPases BCE_4968 SM00388 His Kinase A (phosphoacceptor) domain BCE_4969 SM00448 cheY-homologous receiver domain BCE_4969 SM00862 Transcriptional regulatory protein, C terminal BCE_4976 SM00046 Diacylglycerol kinase catalytic domain (presumed) BCE_4985 SM00382 ATPases associated with a variety of cellular activities BCE_4986 SM00342 helix_turn_helix, arabinose operon control protein BCE_4986 SM00871 Bacterial transcription activator, effector binding domain BCE_4988 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCE_4989 SM00448 cheY-homologous receiver domain BCE_4989 SM00862 Transcriptional regulatory protein, C terminal BCE_4990 SM00387 Histidine kinase-like ATPases BCE_4993 SM00382 ATPases associated with a variety of cellular activities BCE_4999 SM00345 helix_turn_helix gluconate operon transcriptional repressor BCE_4999 SM00866 BCE_4999 BCE_5009 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCE_5009 SM00387 Histidine kinase-like ATPases BCE_5009 SM00388 His Kinase A (phosphoacceptor) domain BCE_5010 SM00448 cheY-homologous receiver domain BCE_5010 SM00862 Transcriptional regulatory protein, C terminal BCE_5011 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BCE_5019 SM00357 Cold shock protein domain BCE_5021 SM00422 helix_turn_helix, mercury resistance BCE_5028 SM00642 Alpha-amylase domain BCE_5039 SM00316 Ribosomal protein S1-like RNA-binding domain BCE_5041 SM00344 helix_turn_helix ASNC type BCE_5048 SM01298 BCE_5048 BCE_5049 SM00479 BCE_5049 BCE_5066 SM00871 Bacterial transcription activator, effector binding domain BCE_5078 SM00382 ATPases associated with a variety of cellular activities BCE_5097 SM00420 helix_turn_helix, Deoxyribose operon repressor BCE_5104 SM00422 helix_turn_helix, mercury resistance BCE_5107 SM00855 Phosphoglycerate mutase family BCE_5109 SM00729 Elongator protein 3, MiaB family, Radical SAM BCE_5120 SM00382 ATPases associated with a variety of cellular activities BCE_5125 SM00382 ATPases associated with a variety of cellular activities BCE_5125 SM00930 BCE_5125 BCE_5128 SM00493 BCE_5128 BCE_5141 SM00849 Metallo-beta-lactamase superfamily BCE_5151 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BCE_5151 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCE_5169 SM00530 Helix-turn-helix XRE-family like proteins BCE_5173 SM00448 cheY-homologous receiver domain BCE_5173 SM00862 Transcriptional regulatory protein, C terminal BCE_5174 SM00387 Histidine kinase-like ATPases BCE_5174 SM00388 His Kinase A (phosphoacceptor) domain BCE_5180 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BCE_5180 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCE_5181 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BCE_5181 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCE_5185 SM00347 helix_turn_helix multiple antibiotic resistance protein BCE_5203 SM01276 BCE_5203 BCE_5211 SM00363 S4 RNA-binding domain BCE_5213 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain BCE_5214 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BCE_5223 SM00382 ATPases associated with a variety of cellular activities BCE_5227 SM00448 cheY-homologous receiver domain BCE_5227 SM00862 Transcriptional regulatory protein, C terminal BCE_5232 SM00316 Ribosomal protein S1-like RNA-binding domain BCE_5232 SM00357 Cold shock protein domain BCE_5232 SM00955 BCE_5232 BCE_5238 SM01192 BCE_5238 BCE_5238 SM01193 BCE_5238 BCE_5242 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BCE_5263 SM00028 Tetratricopeptide repeats BCE_5272 SM00487 DEAD-like helicases superfamily BCE_5272 SM00490 helicase superfamily c-terminal domain BCE_5275 SM00422 helix_turn_helix, mercury resistance BCE_5278 SM00530 Helix-turn-helix XRE-family like proteins BCE_5281 SM00422 helix_turn_helix, mercury resistance BCE_5285 SM00382 ATPases associated with a variety of cellular activities BCE_5288 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BCE_5288 SM00245 tail specific protease BCE_5290 SM00382 ATPases associated with a variety of cellular activities BCE_5295 SM00957 SecA DEAD-like domain BCE_5295 SM00958 SecA preprotein cross-linking domain BCE_5298 SM00357 Cold shock protein domain BCE_5300 SM00487 DEAD-like helicases superfamily BCE_5300 SM00490 helicase superfamily c-terminal domain BCE_5308 SM00984 UDP binding domain BCE_5313 SM00382 ATPases associated with a variety of cellular activities BCE_5315 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. BCE_5353 SM00287 Bacterial SH3 domain homologues BCE_5360 SM00287 Bacterial SH3 domain homologues BCE_5364 SM00487 DEAD-like helicases superfamily BCE_5364 SM00490 helicase superfamily c-terminal domain BCE_5373 SM00382 ATPases associated with a variety of cellular activities BCE_5378 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCE_5378 SM00387 Histidine kinase-like ATPases BCE_5378 SM00388 His Kinase A (phosphoacceptor) domain BCE_5379 SM00448 cheY-homologous receiver domain BCE_5379 SM00862 Transcriptional regulatory protein, C terminal BCE_5385 SM00984 UDP binding domain BCE_5409 SM00382 ATPases associated with a variety of cellular activities BCE_5410 SM00850 LytTr DNA-binding domain BCE_5426 SM00052 Putative diguanylate phosphodiesterase BCE_5426 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BCE_5426 SM00091 PAS domain BCE_5426 SM00267 diguanylate cyclase BCE_5430 SM00382 ATPases associated with a variety of cellular activities BCE_5444 SM00226 Low molecular weight phosphatase family BCE_5447 SM00903 Flavin reductase like domain BCE_5456 SM00937 BCE_5456 BCE_5460 SM00357 Cold shock protein domain BCE_5460 SM00382 ATPases associated with a variety of cellular activities BCE_5460 SM00959 Rho termination factor, N-terminal domain BCE_5466 SM00448 cheY-homologous receiver domain BCE_5477 SM00155 Phospholipase D. Active site motifs. BCE_5479 SM00052 Putative diguanylate phosphodiesterase BCE_5479 SM00267 diguanylate cyclase BCE_5481 SM00530 Helix-turn-helix XRE-family like proteins BCE_5482 SM00421 helix_turn_helix, Lux Regulon BCE_5482 SM00448 cheY-homologous receiver domain BCE_5485 SM00382 ATPases associated with a variety of cellular activities BCE_5493 SM00836 DALR anticodon binding domain BCE_5493 SM01016 Arginyl tRNA synthetase N terminal dom BCE_5502 SM00422 helix_turn_helix, mercury resistance BCE_5508 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BCE_5510 SM00382 ATPases associated with a variety of cellular activities BCE_5518 SM00936 Penicillin-binding protein 5, C-terminal domain BCE_5527 SM00986 Uracil DNA glycosylase superfamily BCE_5527 SM00987 UreE urease accessory protein, C-terminal domain BCE_5529 SM00382 ATPases associated with a variety of cellular activities BCE_5531 SM00354 helix_turn _helix lactose operon repressor BCE_5538 SM00100 Cyclic nucleotide-monophosphate binding domain BCE_5540 SM00421 helix_turn_helix, Lux Regulon BCE_5540 SM00448 cheY-homologous receiver domain BCE_5541 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BCE_5543 SM00267 diguanylate cyclase BCE_5546 SM00448 cheY-homologous receiver domain BCE_5546 SM00850 LytTr DNA-binding domain BCE_5552 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BCE_5564 SM00382 ATPases associated with a variety of cellular activities BCE_5573 SM00448 cheY-homologous receiver domain BCE_5573 SM00850 LytTr DNA-binding domain BCE_5574 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BCE_5574 SM00387 Histidine kinase-like ATPases BCE_5592 SM00487 DEAD-like helicases superfamily BCE_5592 SM00490 helicase superfamily c-terminal domain BCE_5594 SM01240 BCE_5594 BCE_5598 SM00857 Resolvase, N terminal domain BCE_5600 SM00857 Resolvase, N terminal domain BCE_5603 SM00530 Helix-turn-helix XRE-family like proteins BCE_5610 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BCE_5611 SM00849 Metallo-beta-lactamase superfamily BCE_5614 SM00091 PAS domain BCE_5614 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCE_5614 SM00387 Histidine kinase-like ATPases BCE_5614 SM00388 His Kinase A (phosphoacceptor) domain BCE_5615 SM00448 cheY-homologous receiver domain BCE_5615 SM00862 Transcriptional regulatory protein, C terminal BCE_5617 SM00788 Adenylosuccinate synthetase BCE_5621 SM00267 diguanylate cyclase BCE_5630 SM00470 ParB-like nuclease domain BCE_5632 SM00470 ParB-like nuclease domain BCE_5634 SM01228 BCE_5634 BCE_5636 SM00393 Putative single-stranded nucleic acids-binding domain BCE_5636 SM01245 BCE_5636 BCE_A0070 SM00864 Tubulin/FtsZ family, GTPase domain BCE_A0073 SM00843 BCE_A0073 BCE_A0091 SM00480 DNA polymerase III beta subunit BCE_A0103 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BCE_A0140 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BCE_A0140 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BCE_A0140 SM00493 BCE_A0140 BCE_A0141 SM00318 Staphylococcal nuclease homologues BCE_A0145 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCE_A0148 SM00028 Tetratricopeptide repeats BCE_A0156 SM00382 ATPases associated with a variety of cellular activities BCE_A0158 SM00226 Low molecular weight phosphatase family BCE_A0160 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCE_A0166 SM00729 Elongator protein 3, MiaB family, Radical SAM BCE_A0167 SM00028 Tetratricopeptide repeats BCE_A0167 SM00530 Helix-turn-helix XRE-family like proteins BCE_A0169 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCE_A0170 SM01209 BCE_A0170 BCE_A0172 SM00347 helix_turn_helix multiple antibiotic resistance protein BCE_A0203 SM00287 Bacterial SH3 domain homologues BCE_A0208 SM00062 Bacterial periplasmic substrate-binding proteins BCE_A0208 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BCE_A0210 SM00382 ATPases associated with a variety of cellular activities BCE_A0213 SM00448 cheY-homologous receiver domain BCE_A0213 SM00862 Transcriptional regulatory protein, C terminal BCE_A0214 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BCE_A0214 SM00387 Histidine kinase-like ATPases BCE_A0214 SM00388 His Kinase A (phosphoacceptor) domain BCE_A0221 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BCE_A0225 SM00860 SMI1 / KNR4 family BCE_A0234 SM00530 Helix-turn-helix XRE-family like proteins BCE_A0235 SM00966 SpoVT / AbrB like domain