locus-tag class description LRS65_00005 PF00308 Bacterial dnaA protein LRS65_00005 PF08299 Bacterial dnaA protein helix-turn-helix LRS65_00005 PF11638 DnaA N-terminal domain LRS65_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain LRS65_00010 PF02767 DNA polymerase III beta subunit, central domain LRS65_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain LRS65_00020 PF02463 RecF/RecN/SMC N terminal domain LRS65_00025 PF00204 DNA gyrase B LRS65_00025 PF00986 DNA gyrase B subunit, carboxyl terminus LRS65_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_00025 PF01751 Toprim domain LRS65_00030 PF00521 DNA gyrase/topoisomerase IV, subunit A LRS65_00030 PF03989 DNA gyrase C-terminal domain, beta-propeller LRS65_00060 PF14175 YaaC-like Protein LRS65_00065 PF00571 CBS domain LRS65_00065 PF00478 IMP dehydrogenase / GMP reductase domain LRS65_00070 PF07943 Penicillin-binding protein 5, C-terminal domain LRS65_00070 PF00768 D-alanyl-D-alanine carboxypeptidase LRS65_00075 PF01680 SOR/SNZ family LRS65_00080 PF01174 SNO glutamine amidotransferase family LRS65_00085 PF02403 Seryl-tRNA synthetase N-terminal domain LRS65_00085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LRS65_00100 PF01712 Deoxynucleoside kinase LRS65_00105 PF01712 Deoxynucleoside kinase LRS65_00110 PF00857 Isochorismatase family LRS65_00115 PF14437 MafB19-like deaminase LRS65_00125 PF12169 DNA polymerase III subunits gamma and tau domain III LRS65_00130 PF02575 YbaB/EbfC DNA-binding family LRS65_00135 PF02132 RecR protein LRS65_00135 PF13662 Toprim domain LRS65_00140 PF10704 Protein of unknown function (DUF2508) LRS65_00145 PF07441 SigmaK-factor processing regulatory protein BofA LRS65_00180 PF01276 Orn/Lys/Arg decarboxylase, major domain LRS65_00180 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LRS65_00185 PF02223 Thymidylate kinase LRS65_00190 PF09115 DNA polymerase III, delta subunit, C terminal LRS65_00195 PF04468 PSP1 C-terminal conserved region LRS65_00200 PF06156 Initiation control protein YabA LRS65_00205 PF05175 Methyltransferase small domain LRS65_00210 PF01541 GIY-YIG catalytic domain LRS65_00215 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LRS65_00220 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LRS65_00220 PF18277 AbrB C-terminal domain LRS65_00225 PF08264 Anticodon-binding domain of tRNA LRS65_00225 PF09334 tRNA synthetases class I (M) LRS65_00225 PF01588 Putative tRNA binding domain LRS65_00230 PF01026 TatD related DNase LRS65_00235 PF13331 Domain of unknown function (DUF4093) LRS65_00235 PF13662 Toprim domain LRS65_00240 PF00398 Ribosomal RNA adenine dimethylase LRS65_00245 PF05582 YabG peptidase U57 LRS65_00250 PF06257 Biofilm formation stimulator VEG LRS65_00255 PF00269 Small, acid-soluble spore proteins, alpha/beta type LRS65_00260 PF00288 GHMP kinases N terminal domain LRS65_00260 PF08544 GHMP kinases C terminal LRS65_00265 PF09182 Bacterial purine repressor, N-terminal LRS65_00265 PF00156 Phosphoribosyl transferase domain LRS65_00270 PF01042 Endoribonuclease L-PSP LRS65_00275 PF04026 SpoVG LRS65_00280 PF00483 Nucleotidyl transferase LRS65_00280 PF00132 Bacterial transferase hexapeptide (six repeats) LRS65_00285 PF14572 Phosphoribosyl synthetase-associated domain LRS65_00285 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LRS65_00290 PF01195 Peptidyl-tRNA hydrolase LRS65_00300 PF02559 CarD-like/TRCF domain LRS65_00300 PF00270 DEAD/DEAH box helicase LRS65_00300 PF00271 Helicase conserved C-terminal domain LRS65_00300 PF03461 TRCF domain LRS65_00300 PF17757 UvrB interaction domain LRS65_00305 PF15714 Stage V sporulation protein T C-terminal, transcription factor LRS65_00305 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LRS65_00310 PF14667 Polysaccharide biosynthesis C-terminal domain LRS65_00310 PF01943 Polysaccharide biosynthesis protein LRS65_00315 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LRS65_00315 PF03819 MazG nucleotide pyrophosphohydrolase domain LRS65_00320 PF01479 S4 domain LRS65_00325 PF07873 YabP family LRS65_00330 PF09578 Spore cortex protein YabQ (Spore_YabQ) LRS65_00340 PF00575 S1 RNA binding domain LRS65_00355 PF07228 Stage II sporulation protein E (SpoIIE) LRS65_00360 PF11734 TilS substrate C-terminal domain LRS65_00360 PF01171 PP-loop family LRS65_00360 PF09179 TilS substrate binding domain LRS65_00365 PF00156 Phosphoribosyl transferase domain LRS65_00370 PF00004 ATPase family associated with various cellular activities (AAA) LRS65_00370 PF17862 AAA+ lid domain LRS65_00370 PF06480 FtsH Extracellular LRS65_00370 PF01434 Peptidase family M41 LRS65_00375 PF03309 Type III pantothenate kinase LRS65_00380 PF01430 Hsp33 protein LRS65_00385 PF00291 Pyridoxal-phosphate dependent enzyme LRS65_00390 PF04715 Anthranilate synthase component I, N terminal region LRS65_00390 PF00425 chorismate binding enzyme LRS65_00395 PF00117 Glutamine amidotransferase class-I LRS65_00400 PF01063 Amino-transferase class IV LRS65_00405 PF00809 Pterin binding enzyme LRS65_00410 PF02152 Dihydroneopterin aldolase LRS65_00415 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LRS65_00420 PF01381 Helix-turn-helix LRS65_00425 PF01207 Dihydrouridine synthase (Dus) LRS65_00430 PF00152 tRNA synthetases class II (D, K and N) LRS65_00430 PF01336 OB-fold nucleic acid binding domain LRS65_00510 PF05848 CtsR N-terminal HTH domain LRS65_00510 PF17727 CtsR C-terminal dimerization domain LRS65_00515 PF02151 UvrB/uvrC motif LRS65_00520 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain LRS65_00525 PF17871 AAA lid domain LRS65_00525 PF00004 ATPase family associated with various cellular activities (AAA) LRS65_00525 PF07724 AAA domain (Cdc48 subfamily) LRS65_00525 PF10431 C-terminal, D2-small domain, of ClpB protein LRS65_00525 PF02861 Clp amino terminal domain, pathogenicity island component LRS65_00530 PF18073 Rubredoxin metal binding domain LRS65_00535 PF10635 DisA bacterial checkpoint controller linker region LRS65_00535 PF02457 DisA bacterial checkpoint controller nucleotide-binding LRS65_00545 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LRS65_00550 PF02542 YgbB family LRS65_00555 PF00749 tRNA synthetases class I (E and Q), catalytic domain LRS65_00560 PF00132 Bacterial transferase hexapeptide (six repeats) LRS65_00560 PF06426 Serine acetyltransferase, N-terminal LRS65_00565 PF01406 tRNA synthetases class I (C) catalytic domain LRS65_00565 PF09190 DALR domain LRS65_00570 PF00636 Ribonuclease III domain LRS65_00575 PF08032 RNA 2'-O ribose methyltransferase substrate binding LRS65_00575 PF00588 SpoU rRNA Methylase family LRS65_00580 PF05991 YacP-like NYN domain LRS65_00585 PF04542 Sigma-70 region 2 LRS65_00585 PF08281 Sigma-70, region 4 LRS65_00590 PF00471 Ribosomal protein L33 LRS65_00595 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LRS65_00600 PF02357 Transcription termination factor nusG LRS65_00600 PF00467 KOW motif LRS65_00605 PF00298 Ribosomal protein L11, RNA binding domain LRS65_00605 PF03946 Ribosomal protein L11, N-terminal domain LRS65_00610 PF00687 Ribosomal protein L1p/L10e family LRS65_00615 PF00466 Ribosomal protein L10 LRS65_00620 PF16320 Ribosomal protein L7/L12 dimerisation domain LRS65_00620 PF00542 Ribosomal protein L7/L12 C-terminal domain LRS65_00625 PF05175 Methyltransferase small domain LRS65_00630 PF04560 RNA polymerase Rpb2, domain 7 LRS65_00630 PF00562 RNA polymerase Rpb2, domain 6 LRS65_00630 PF10385 RNA polymerase beta subunit external 1 domain LRS65_00630 PF04565 RNA polymerase Rpb2, domain 3 LRS65_00630 PF04561 RNA polymerase Rpb2, domain 2 LRS65_00630 PF04563 RNA polymerase beta subunit LRS65_00635 PF00623 RNA polymerase Rpb1, domain 2 LRS65_00635 PF04997 RNA polymerase Rpb1, domain 1 LRS65_00635 PF05000 RNA polymerase Rpb1, domain 4 LRS65_00635 PF04983 RNA polymerase Rpb1, domain 3 LRS65_00635 PF04998 RNA polymerase Rpb1, domain 5 LRS65_00640 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family LRS65_00645 PF00164 Ribosomal protein S12/S23 LRS65_00650 PF00177 Ribosomal protein S7p/S5e LRS65_00655 PF03144 Elongation factor Tu domain 2 LRS65_00655 PF00009 Elongation factor Tu GTP binding domain LRS65_00655 PF03764 Elongation factor G, domain IV LRS65_00655 PF14492 Elongation Factor G, domain II LRS65_00655 PF00679 Elongation factor G C-terminus LRS65_00660 PF03143 Elongation factor Tu C-terminal domain LRS65_00660 PF03144 Elongation factor Tu domain 2 LRS65_00660 PF00009 Elongation factor Tu GTP binding domain LRS65_00665 PF00338 Ribosomal protein S10p/S20e LRS65_00670 PF00297 Ribosomal protein L3 LRS65_00675 PF00573 Ribosomal protein L4/L1 family LRS65_00680 PF00276 Ribosomal protein L23 LRS65_00685 PF00181 Ribosomal Proteins L2, RNA binding domain LRS65_00685 PF03947 Ribosomal Proteins L2, C-terminal domain LRS65_00690 PF00203 Ribosomal protein S19 LRS65_00695 PF00237 Ribosomal protein L22p/L17e LRS65_00700 PF07650 KH domain LRS65_00700 PF00189 Ribosomal protein S3, C-terminal domain LRS65_00705 PF00252 Ribosomal protein L16p/L10e LRS65_00710 PF00831 Ribosomal L29 protein LRS65_00715 PF00366 Ribosomal protein S17 LRS65_00720 PF00238 Ribosomal protein L14p/L23e LRS65_00725 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LRS65_00725 PF00467 KOW motif LRS65_00730 PF00281 Ribosomal protein L5 LRS65_00730 PF00673 ribosomal L5P family C-terminus LRS65_00735 PF00253 Ribosomal protein S14p/S29e LRS65_00740 PF00410 Ribosomal protein S8 LRS65_00745 PF00347 Ribosomal protein L6 LRS65_00750 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LRS65_00755 PF00333 Ribosomal protein S5, N-terminal domain LRS65_00755 PF03719 Ribosomal protein S5, C-terminal domain LRS65_00760 PF00327 Ribosomal protein L30p/L7e LRS65_00765 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LRS65_00770 PF00344 SecY translocase LRS65_00775 PF05191 Adenylate kinase, active site lid LRS65_00780 PF00557 Metallopeptidase family M24 LRS65_00785 PF01176 Translation initiation factor 1A / IF-1 LRS65_00790 PF00444 Ribosomal protein L36 LRS65_00795 PF00416 Ribosomal protein S13/S18 LRS65_00800 PF00411 Ribosomal protein S11 LRS65_00805 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LRS65_00805 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LRS65_00805 PF01000 RNA polymerase Rpb3/RpoA insert domain LRS65_00810 PF01196 Ribosomal protein L17 LRS65_00815 PF00005 ABC transporter LRS65_00820 PF00005 ABC transporter LRS65_00825 PF02361 Cobalt transport protein LRS65_00830 PF01416 tRNA pseudouridine synthase LRS65_00835 PF00572 Ribosomal protein L13 LRS65_00840 PF00380 Ribosomal protein S9/S16 LRS65_00850 PF01520 N-acetylmuramoyl-L-alanine amidase LRS65_00855 PF10609 NUBPL iron-transfer P-loop NTPase LRS65_00860 PF17898 Spore germination GerD central core domain LRS65_00865 PF14089 KinB-signalling pathway activation in sporulation LRS65_00870 PF01522 Polysaccharide deacetylase LRS65_00940 PF02595 Glycerate kinase family LRS65_00945 PF00491 Arginase family LRS65_00950 PF02457 DisA bacterial checkpoint controller nucleotide-binding LRS65_00955 PF07949 YbbR-like protein LRS65_00960 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LRS65_00960 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LRS65_00960 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LRS65_00960 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LRS65_00970 PF01380 SIS domain LRS65_00980 PF00326 Prolyl oligopeptidase family LRS65_00980 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region LRS65_01010 PF00528 Binding-protein-dependent transport system inner membrane component LRS65_01015 PF00005 ABC transporter LRS65_01015 PF09383 NIL domain LRS65_01020 PF03180 NLPA lipoprotein LRS65_01025 PF08240 Alcohol dehydrogenase GroES-like domain LRS65_01025 PF00107 Zinc-binding dehydrogenase LRS65_01035 PF01565 FAD binding domain LRS65_01040 PF07690 Major Facilitator Superfamily LRS65_01050 PF07690 Major Facilitator Superfamily LRS65_01070 PF00528 Binding-protein-dependent transport system inner membrane component LRS65_01075 PF12911 N-terminal TM domain of oligopeptide transport permease C LRS65_01075 PF00528 Binding-protein-dependent transport system inner membrane component LRS65_01080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LRS65_01080 PF00005 ABC transporter LRS65_01085 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LRS65_01085 PF00005 ABC transporter LRS65_01090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LRS65_01100 PF12833 Helix-turn-helix domain LRS65_01115 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LRS65_01120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LRS65_01125 PF00248 Aldo/keto reductase family LRS65_01130 PF03807 NADP oxidoreductase coenzyme F420-dependent LRS65_01130 PF14748 Pyrroline-5-carboxylate reductase dimerisation LRS65_01135 PF04973 Nicotinamide mononucleotide transporter LRS65_01140 PF06800 Sugar transport protein LRS65_01145 PF00528 Binding-protein-dependent transport system inner membrane component LRS65_01155 PF12727 PBP superfamily domain LRS65_01155 PF12728 Helix-turn-helix domain LRS65_01165 PF03466 LysR substrate binding domain LRS65_01165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRS65_01170 PF00892 EamA-like transporter family LRS65_01175 PF14142 YrzO-like protein LRS65_01185 PF01553 Acyltransferase LRS65_01195 PF00356 Bacterial regulatory proteins, lacI family LRS65_01195 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LRS65_01205 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LRS65_01205 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LRS65_01220 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) LRS65_01245 PF12848 ABC transporter LRS65_01245 PF16326 ABC transporter C-terminal domain LRS65_01245 PF00005 ABC transporter LRS65_01255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LRS65_01260 PF00528 Binding-protein-dependent transport system inner membrane component LRS65_01265 PF12911 N-terminal TM domain of oligopeptide transport permease C LRS65_01265 PF00528 Binding-protein-dependent transport system inner membrane component LRS65_01270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LRS65_01270 PF00005 ABC transporter LRS65_01275 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LRS65_01275 PF00005 ABC transporter LRS65_01310 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LRS65_01315 PF01557 Fumarylacetoacetate (FAA) hydrolase family LRS65_01325 PF13520 Amino acid permease LRS65_01330 PF07690 Major Facilitator Superfamily LRS65_01335 PF01820 D-ala D-ala ligase N-terminus LRS65_01335 PF07478 D-ala D-ala ligase C-terminus LRS65_01340 PF08245 Mur ligase middle domain LRS65_01340 PF02875 Mur ligase family, glutamate ligase domain LRS65_01340 PF01225 Mur ligase family, catalytic domain LRS65_01345 PF00271 Helicase conserved C-terminal domain LRS65_01345 PF00270 DEAD/DEAH box helicase LRS65_01350 PF03851 UV-endonuclease UvdE LRS65_01355 PF01694 Rhomboid family LRS65_01360 PF01648 4'-phosphopantetheinyl transferase superfamily LRS65_01370 PF00842 Alanine racemase, C-terminal domain LRS65_01370 PF01168 Alanine racemase, N-terminal domain LRS65_01375 PF01402 Ribbon-helix-helix protein, copG family LRS65_01380 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system LRS65_01385 PF09371 Tex-like protein N-terminal domain LRS65_01385 PF16921 Tex protein YqgF-like domain LRS65_01385 PF00575 S1 RNA binding domain LRS65_01385 PF17674 HHH domain LRS65_01395 PF10263 SprT-like family LRS65_01395 PF17283 SprT-like zinc ribbon domain LRS65_01485 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LRS65_01490 PF00814 Glycoprotease family LRS65_01495 PF00583 Acetyltransferase (GNAT) family LRS65_01500 PF00814 Glycoprotease family LRS65_01505 PF00005 ABC transporter LRS65_01505 PF12848 ABC transporter LRS65_01505 PF16326 ABC transporter C-terminal domain LRS65_01510 PF02629 CoA binding domain LRS65_01510 PF06971 Putative DNA-binding protein N-terminus LRS65_01520 PF02517 CPBP intramembrane metalloprotease LRS65_01525 PF00166 Chaperonin 10 Kd subunit LRS65_01530 PF00118 TCP-1/cpn60 chaperonin family LRS65_01535 PF00117 Glutamine amidotransferase class-I LRS65_01535 PF02540 NAD synthase LRS65_01535 PF00958 GMP synthase C terminal domain LRS65_01540 PF00860 Permease family LRS65_01545 PF00486 Transcriptional regulatory protein, C terminal LRS65_01545 PF00072 Response regulator receiver domain LRS65_01550 PF00989 PAS fold LRS65_01550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_01550 PF16736 Single Cache-like LRS65_01550 PF00512 His Kinase A (phospho-acceptor) domain LRS65_01570 PF14307 Glycosyltransferase WbsX LRS65_01570 PF05045 Rhamnan synthesis protein F LRS65_01600 PF00535 Glycosyl transferase family 2 LRS65_01620 PF00892 EamA-like transporter family LRS65_01650 PF00731 AIR carboxylase LRS65_01655 PF02222 ATP-grasp domain LRS65_01655 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LRS65_01660 PF10397 Adenylosuccinate lyase C-terminus LRS65_01660 PF00206 Lyase LRS65_01665 PF01259 SAICAR synthetase LRS65_01670 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase LRS65_01680 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LRS65_01680 PF02769 AIR synthase related protein, C-terminal domain LRS65_01680 PF00586 AIR synthase related protein, N-terminal domain LRS65_01690 PF02769 AIR synthase related protein, C-terminal domain LRS65_01690 PF00586 AIR synthase related protein, N-terminal domain LRS65_01695 PF00551 Formyl transferase LRS65_01700 PF02142 MGS-like domain LRS65_01700 PF01808 AICARFT/IMPCHase bienzyme LRS65_01705 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LRS65_01705 PF02843 Phosphoribosylglycinamide synthetase, C domain LRS65_01705 PF02844 Phosphoribosylglycinamide synthetase, N domain LRS65_01725 PF01884 PcrB family LRS65_01730 PF00580 UvrD/REP helicase N-terminal domain LRS65_01730 PF13361 UvrD-like helicase C-terminal domain LRS65_01735 PF03120 NAD-dependent DNA ligase OB-fold domain LRS65_01735 PF00533 BRCA1 C Terminus (BRCT) domain LRS65_01735 PF01653 NAD-dependent DNA ligase adenylation domain LRS65_01735 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LRS65_01735 PF12826 Helix-hairpin-helix motif LRS65_01740 PF07537 CamS sex pheromone cAM373 precursor LRS65_01745 PF01925 Sulfite exporter TauE/SafE LRS65_01750 PF00171 Aldehyde dehydrogenase family LRS65_01755 PF00857 Isochorismatase family LRS65_01760 PF00005 ABC transporter LRS65_01760 PF09383 NIL domain LRS65_01765 PF00528 Binding-protein-dependent transport system inner membrane component LRS65_01770 PF03180 NLPA lipoprotein LRS65_01785 PF17886 HSP20-like domain found in ArsA LRS65_01785 PF02374 Anion-transporting ATPase LRS65_01790 PF01047 MarR family LRS65_01795 PF05360 yiaA/B two helix domain LRS65_01800 PF02686 Glu-tRNAGln amidotransferase C subunit LRS65_01805 PF01425 Amidase LRS65_01810 PF02934 GatB/GatE catalytic domain LRS65_01810 PF02637 GatB domain LRS65_01815 PF00781 Diacylglycerol kinase catalytic domain LRS65_01820 PF13419 Haloacid dehalogenase-like hydrolase LRS65_01825 PF00202 Aminotransferase class-III LRS65_01830 PF00158 Sigma-54 interaction domain LRS65_01835 PF00171 Aldehyde dehydrogenase family LRS65_01840 PF00893 Small Multidrug Resistance protein LRS65_01850 PF02073 Thermophilic metalloprotease (M29) LRS65_01870 PF07662 Na+ dependent nucleoside transporter C-terminus LRS65_01870 PF07670 Nucleoside recognition LRS65_01870 PF01773 Na+ dependent nucleoside transporter N-terminus LRS65_01875 PF05958 tRNA (Uracil-5-)-methyltransferase LRS65_01875 PF01938 TRAM domain LRS65_01875 PF13847 Methyltransferase domain LRS65_01880 PF01207 Dihydrouridine synthase (Dus) LRS65_01895 PF07308 Protein of unknown function (DUF1456) LRS65_01910 PF13378 Enolase C-terminal domain-like LRS65_01910 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LRS65_01920 PF03553 Na+/H+ antiporter family LRS65_01925 PF01546 Peptidase family M20/M25/M40 LRS65_01925 PF07687 Peptidase dimerisation domain LRS65_01940 PF13192 Thioredoxin domain LRS65_01940 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRS65_01945 PF00578 AhpC/TSA family LRS65_01950 PF01636 Phosphotransferase enzyme family LRS65_01955 PF01008 Initiation factor 2 subunit family LRS65_01960 PF00596 Class II Aldolase and Adducin N-terminal domain LRS65_01965 PF01032 FecCD transport family LRS65_01970 PF01032 FecCD transport family LRS65_01975 PF01497 Periplasmic binding protein LRS65_01980 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRS65_01990 PF12728 Helix-turn-helix domain LRS65_02015 PF13426 PAS domain LRS65_02015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_02015 PF00512 His Kinase A (phospho-acceptor) domain LRS65_02015 PF00989 PAS fold LRS65_02015 PF13188 PAS domain LRS65_02035 PF10127 RNA repair pathway DNA polymerase beta family LRS65_02040 PF07690 Major Facilitator Superfamily LRS65_02045 PF01266 FAD dependent oxidoreductase LRS65_02045 PF00355 Rieske [2Fe-2S] domain LRS65_02055 PF00528 Binding-protein-dependent transport system inner membrane component LRS65_02060 PF00497 Bacterial extracellular solute-binding proteins, family 3 LRS65_02065 PF00005 ABC transporter LRS65_02070 PF12729 Four helix bundle sensory module for signal transduction LRS65_02070 PF00672 HAMP domain LRS65_02070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LRS65_02075 PF01316 Arginine repressor, DNA binding domain LRS65_02075 PF02863 Arginine repressor, C-terminal domain LRS65_02085 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LRS65_02085 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LRS65_02090 PF13520 Amino acid permease LRS65_02095 PF00696 Amino acid kinase family LRS65_02100 PF13545 Crp-like helix-turn-helix domain LRS65_02100 PF00027 Cyclic nucleotide-binding domain LRS65_02110 PF01565 FAD binding domain LRS65_02110 PF08031 Berberine and berberine like LRS65_02115 PF16657 Maltogenic Amylase, C-terminal domain LRS65_02115 PF00128 Alpha amylase, catalytic domain LRS65_02120 PF02378 Phosphotransferase system, EIIC LRS65_02120 PF00367 phosphotransferase system, EIIB LRS65_02120 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LRS65_02125 PF03372 Endonuclease/Exonuclease/phosphatase family LRS65_02130 PF01061 ABC-2 type transporter LRS65_02135 PF01131 DNA topoisomerase LRS65_02135 PF01751 Toprim domain LRS65_02140 PF02110 Hydroxyethylthiazole kinase family LRS65_02145 PF02581 Thiamine monophosphate synthase LRS65_02155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LRS65_02155 PF00672 HAMP domain LRS65_02160 PF13193 AMP-binding enzyme C-terminal domain LRS65_02160 PF00668 Condensation domain LRS65_02160 PF00975 Thioesterase domain LRS65_02160 PF00501 AMP-binding enzyme LRS65_02160 PF00550 Phosphopantetheine attachment site LRS65_02165 PF01910 Thiamine-binding protein LRS65_02170 PF00528 Binding-protein-dependent transport system inner membrane component LRS65_02180 PF00005 ABC transporter LRS65_02185 PF00005 ABC transporter LRS65_02185 PF12848 ABC transporter LRS65_02190 PF00041 Fibronectin type III domain LRS65_02190 PF00704 Glycosyl hydrolases family 18 LRS65_02195 PF09350 Domain of unknown function (DUF1992) LRS65_02215 PF08360 QacR-like protein, C-terminal region LRS65_02215 PF00440 Bacterial regulatory proteins, tetR family LRS65_02230 PF11700 Vacuole effluxer Atg22 like LRS65_02245 PF03129 Anticodon binding domain LRS65_02245 PF09180 Prolyl-tRNA synthetase, C-terminal LRS65_02245 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LRS65_02255 PF00480 ROK family LRS65_02260 PF02342 TerD domain LRS65_02265 PF02342 TerD domain LRS65_02270 PF02342 TerD domain LRS65_02275 PF03741 Integral membrane protein TerC family LRS65_02280 PF14266 Putative component of 'biosynthetic module' LRS65_02285 PF05816 Toxic anion resistance protein (TelA) LRS65_02290 PF00689 Cation transporting ATPase, C-terminus LRS65_02290 PF00690 Cation transporter/ATPase, N-terminus LRS65_02295 PF06569 Protein of unknown function (DUF1128) LRS65_02300 PF01451 Low molecular weight phosphotyrosine protein phosphatase LRS65_02310 PF03631 Virulence factor BrkB LRS65_02320 PF00892 EamA-like transporter family LRS65_02330 PF10502 Signal peptidase, peptidase S26 LRS65_02340 PF09335 SNARE associated Golgi protein LRS65_02355 PF16242 Pyridoxamine 5'-phosphate oxidase like LRS65_02360 PF01699 Sodium/calcium exchanger protein LRS65_02365 PF14167 YfkD-like protein LRS65_02370 PF04055 Radical SAM superfamily LRS65_02370 PF08756 YfkB-like domain LRS65_02380 PF05683 Fumarase C-terminus LRS65_02380 PF05681 Fumarate hydratase (Fumerase) LRS65_02385 PF01522 Polysaccharide deacetylase LRS65_02390 PF00730 HhH-GPD superfamily base excision DNA repair protein LRS65_02395 PF01938 TRAM domain LRS65_02395 PF05958 tRNA (Uracil-5-)-methyltransferase LRS65_02400 PF01416 tRNA pseudouridine synthase LRS65_02410 PF02954 Bacterial regulatory protein, Fis family LRS65_02410 PF13426 PAS domain LRS65_02410 PF00158 Sigma-54 interaction domain LRS65_02420 PF00324 Amino acid permease LRS65_02425 PF07687 Peptidase dimerisation domain LRS65_02425 PF01546 Peptidase family M20/M25/M40 LRS65_02450 PF04960 Glutaminase LRS65_02455 PF00367 phosphotransferase system, EIIB LRS65_02455 PF02378 Phosphotransferase system, EIIC LRS65_02460 PF00144 Beta-lactamase LRS65_02475 PF00535 Glycosyl transferase family 2 LRS65_02480 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LRS65_02480 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LRS65_02480 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LRS65_02485 PF01370 NAD dependent epimerase/dehydratase family LRS65_02485 PF02911 Formyl transferase, C-terminal domain LRS65_02485 PF00551 Formyl transferase LRS65_02490 PF00535 Glycosyl transferase family 2 LRS65_02500 PF01228 Glycine radical LRS65_02500 PF02901 Pyruvate formate lyase-like LRS65_02505 PF04055 Radical SAM superfamily LRS65_02510 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase LRS65_02510 PF04101 Glycosyltransferase family 28 C-terminal domain LRS65_02525 PF01979 Amidohydrolase family LRS65_02530 PF08338 Domain of unknown function (DUF1731) LRS65_02530 PF01370 NAD dependent epimerase/dehydratase family LRS65_02535 PF02631 RecX family LRS65_02550 PF08176 Small acid-soluble spore protein K family LRS65_02555 PF14043 WVELL protein LRS65_02560 PF04307 LexA-binding, inner membrane-associated putative hydrolase LRS65_02565 PF00730 HhH-GPD superfamily base excision DNA repair protein LRS65_02565 PF14815 NUDIX domain LRS65_02575 PF04259 Small, acid-soluble spore protein, gamma-type LRS65_02580 PF14182 YgaB-like protein LRS65_02585 PF04167 Protein of unknown function (DUF402) LRS65_02590 PF00005 ABC transporter LRS65_02590 PF00664 ABC transporter transmembrane region LRS65_02595 PF06081 Aromatic acid exporter family member 1 LRS65_02605 PF00202 Aminotransferase class-III LRS65_02610 PF00005 ABC transporter LRS65_02625 PF07885 Ion channel LRS65_02630 PF00578 AhpC/TSA family LRS65_02635 PF01475 Ferric uptake regulator family LRS65_02645 PF11023 Zinc-ribbon containing domain LRS65_02745 PF01709 Transcriptional regulator LRS65_02750 PF13344 Haloacid dehalogenase-like hydrolase LRS65_02750 PF00293 NUDIX domain LRS65_02755 PF00905 Penicillin binding protein transpeptidase domain LRS65_02755 PF00912 Transglycosylase LRS65_02760 PF13462 Thioredoxin LRS65_02770 PF08331 Domain of unknown function (DUF1730) LRS65_02775 PF12671 Putative amidase domain LRS65_02780 PF00588 SpoU rRNA Methylase family LRS65_02785 PF03707 Bacterial signalling protein N terminal repeat LRS65_02785 PF00990 Diguanylate cyclase, GGDEF domain LRS65_02785 PF00563 EAL domain LRS65_02790 PF06798 PrkA serine protein kinase C-terminal domain LRS65_02790 PF08298 PrkA AAA domain LRS65_02795 PF04285 Protein of unknown function (DUF444) LRS65_02810 PF02028 BCCT, betaine/carnitine/choline family transporter LRS65_02815 PF18496 Collagenase G catalytic helper subdomain LRS65_02815 PF01752 Collagenase LRS65_02815 PF08453 Peptidase family M9 N-terminal LRS65_02825 PF01145 SPFH domain / Band 7 family LRS65_02825 PF15975 Flotillin LRS65_02830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LRS65_02830 PF02743 Cache domain LRS65_02830 PF00672 HAMP domain LRS65_02835 PF17203 Single cache domain 3 LRS65_02835 PF00989 PAS fold LRS65_02835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_02835 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LRS65_02840 PF12431 Transcriptional regulator LRS65_02840 PF00072 Response regulator receiver domain LRS65_02845 PF03600 Citrate transporter LRS65_02870 PF04309 Glycerol-3-phosphate responsive antiterminator LRS65_02875 PF00005 ABC transporter LRS65_02875 PF17912 MalK OB fold domain LRS65_02880 PF00528 Binding-protein-dependent transport system inner membrane component LRS65_02885 PF00528 Binding-protein-dependent transport system inner membrane component LRS65_02890 PF13416 Bacterial extracellular solute-binding protein LRS65_02895 PF00149 Calcineurin-like phosphoesterase LRS65_02900 PF00072 Response regulator receiver domain LRS65_02900 PF00486 Transcriptional regulatory protein, C terminal LRS65_02905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_02905 PF00512 His Kinase A (phospho-acceptor) domain LRS65_02920 PF02743 Cache domain LRS65_02920 PF00672 HAMP domain LRS65_02920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LRS65_02925 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LRS65_02925 PF17203 Single cache domain 3 LRS65_02925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_02925 PF00989 PAS fold LRS65_02930 PF00072 Response regulator receiver domain LRS65_02935 PF03390 2-hydroxycarboxylate transporter family LRS65_02940 PF03949 Malic enzyme, NAD binding domain LRS65_02940 PF00390 Malic enzyme, N-terminal domain LRS65_02950 PF00892 EamA-like transporter family LRS65_02955 PF00392 Bacterial regulatory proteins, gntR family LRS65_02955 PF00155 Aminotransferase class I and II LRS65_02965 PF00512 His Kinase A (phospho-acceptor) domain LRS65_02965 PF18698 Histidine kinase sensor domain LRS65_02965 PF00672 HAMP domain LRS65_02965 PF00989 PAS fold LRS65_02965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_02970 PF00072 Response regulator receiver domain LRS65_02970 PF00486 Transcriptional regulatory protein, C terminal LRS65_02975 PF00583 Acetyltransferase (GNAT) family LRS65_02975 PF13508 Acetyltransferase (GNAT) domain LRS65_02980 PF02634 FdhD/NarQ family LRS65_02985 PF00037 4Fe-4S binding domain LRS65_02985 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LRS65_02985 PF00384 Molybdopterin oxidoreductase LRS65_02985 PF01568 Molydopterin dinucleotide binding domain LRS65_02985 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LRS65_02990 PF07849 Protein of unknown function (DUF1641) LRS65_03000 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LRS65_03000 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LRS65_03005 PF13520 Amino acid permease LRS65_03010 PF01022 Bacterial regulatory protein, arsR family LRS65_03015 PF00403 Heavy-metal-associated domain LRS65_03020 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LRS65_03020 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LRS65_03020 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain LRS65_03035 PF07504 Fungalysin/Thermolysin Propeptide Motif LRS65_03035 PF02868 Thermolysin metallopeptidase, alpha-helical domain LRS65_03035 PF01447 Thermolysin metallopeptidase, catalytic domain LRS65_03035 PF03413 Peptidase propeptide and YPEB domain LRS65_03055 PF04294 VanW like protein LRS65_03060 PF03816 Cell envelope-related transcriptional attenuator domain LRS65_03065 PF07662 Na+ dependent nucleoside transporter C-terminus LRS65_03065 PF01773 Na+ dependent nucleoside transporter N-terminus LRS65_03070 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LRS65_03075 PF00571 CBS domain LRS65_03075 PF03471 Transporter associated domain LRS65_03075 PF01595 Cyclin M transmembrane N-terminal domain LRS65_03080 PF00206 Lyase LRS65_03080 PF10415 Fumarase C C-terminus LRS65_03085 PF02652 L-lactate permease LRS65_03090 PF01022 Bacterial regulatory protein, arsR family LRS65_03095 PF08141 Small acid-soluble spore protein H family LRS65_03100 PF00854 POT family LRS65_03105 PF01497 Periplasmic binding protein LRS65_03110 PF01032 FecCD transport family LRS65_03115 PF01032 FecCD transport family LRS65_03120 PF00005 ABC transporter LRS65_03130 PF00155 Aminotransferase class I and II LRS65_03135 PF01370 NAD dependent epimerase/dehydratase family LRS65_03140 PF00293 NUDIX domain LRS65_03140 PF13344 Haloacid dehalogenase-like hydrolase LRS65_03145 PF00092 von Willebrand factor type A domain LRS65_03150 PF07728 AAA domain (dynein-related subfamily) LRS65_03155 PF13091 PLD-like domain LRS65_03155 PF13396 Phospholipase_D-nuclease N-terminal LRS65_03165 PF03707 Bacterial signalling protein N terminal repeat LRS65_03165 PF00990 Diguanylate cyclase, GGDEF domain LRS65_03165 PF00563 EAL domain LRS65_03170 PF13520 Amino acid permease LRS65_03175 PF07702 UTRA domain LRS65_03175 PF00392 Bacterial regulatory proteins, gntR family LRS65_03180 PF02378 Phosphotransferase system, EIIC LRS65_03180 PF00367 phosphotransferase system, EIIB LRS65_03185 PF16657 Maltogenic Amylase, C-terminal domain LRS65_03185 PF00128 Alpha amylase, catalytic domain LRS65_03200 PF03323 Bacillus/Clostridium GerA spore germination protein LRS65_03210 PF01636 Phosphotransferase enzyme family LRS65_03215 PF01235 Sodium:alanine symporter family LRS65_03220 PF00005 ABC transporter LRS65_03225 PF00497 Bacterial extracellular solute-binding proteins, family 3 LRS65_03230 PF00528 Binding-protein-dependent transport system inner membrane component LRS65_03235 PF00528 Binding-protein-dependent transport system inner membrane component LRS65_03240 PF00324 Amino acid permease LRS65_03255 PF04542 Sigma-70 region 2 LRS65_03255 PF08281 Sigma-70, region 4 LRS65_03265 PF08279 HTH domain LRS65_03265 PF13280 WYL domain LRS65_03270 PF01872 RibD C-terminal domain LRS65_03275 PF00672 HAMP domain LRS65_03275 PF18698 Histidine kinase sensor domain LRS65_03275 PF00512 His Kinase A (phospho-acceptor) domain LRS65_03275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_03275 PF00989 PAS fold LRS65_03280 PF00486 Transcriptional regulatory protein, C terminal LRS65_03280 PF00072 Response regulator receiver domain LRS65_03290 PF00916 Sulfate permease family LRS65_03290 PF01740 STAS domain LRS65_03295 PF00582 Universal stress protein family LRS65_03305 PF07690 Major Facilitator Superfamily LRS65_03310 PF01047 MarR family LRS65_03315 PF07690 Major Facilitator Superfamily LRS65_03320 PF00356 Bacterial regulatory proteins, lacI family LRS65_03325 PF00294 pfkB family carbohydrate kinase LRS65_03330 PF05025 RbsD / FucU transport protein family LRS65_03335 PF00005 ABC transporter LRS65_03340 PF02653 Branched-chain amino acid transport system / permease component LRS65_03345 PF13407 Periplasmic binding protein domain LRS65_03350 PF00923 Transaldolase/Fructose-6-phosphate aldolase LRS65_03355 PF05547 Immune inhibitor A peptidase M6 LRS65_03370 PF08240 Alcohol dehydrogenase GroES-like domain LRS65_03370 PF00107 Zinc-binding dehydrogenase LRS65_03380 PF00882 Zinc dependent phospholipase C LRS65_03385 PF03372 Endonuclease/Exonuclease/phosphatase family LRS65_03415 PF02673 Bacitracin resistance protein BacA LRS65_03420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LRS65_03420 PF00672 HAMP domain LRS65_03420 PF02743 Cache domain LRS65_03425 PF01476 LysM domain LRS65_03425 PF06725 3D domain LRS65_03430 PF01381 Helix-turn-helix LRS65_03440 PF04203 Sortase domain LRS65_03450 PF00854 POT family LRS65_03455 PF05525 Branched-chain amino acid transport protein LRS65_03470 PF00324 Amino acid permease LRS65_03475 PF00860 Permease family LRS65_03485 PF01385 Probable transposase LRS65_03485 PF07282 Putative transposase DNA-binding domain LRS65_03485 PF12323 Helix-turn-helix domain LRS65_03500 PF13673 Acetyltransferase (GNAT) domain LRS65_03510 PF00999 Sodium/hydrogen exchanger family LRS65_03510 PF02080 TrkA-C domain LRS65_03510 PF02254 TrkA-N domain LRS65_03520 PF00510 Cytochrome c oxidase subunit III LRS65_03525 PF00115 Cytochrome C and Quinol oxidase polypeptide I LRS65_03530 PF02790 Cytochrome C oxidase subunit II, transmembrane domain LRS65_03535 PF00324 Amino acid permease LRS65_03540 PF13529 Peptidase_C39 like family LRS65_03545 PF01546 Peptidase family M20/M25/M40 LRS65_03545 PF07687 Peptidase dimerisation domain LRS65_03550 PF11755 Protein of unknown function (DUF3311) LRS65_03555 PF00474 Sodium:solute symporter family LRS65_03560 PF03323 Bacillus/Clostridium GerA spore germination protein LRS65_03565 PF03845 Spore germination protein LRS65_03570 PF05504 Spore germination B3/ GerAC like, C-terminal LRS65_03580 PF02421 Ferrous iron transport protein B LRS65_03580 PF17910 FeoB cytosolic helical domain LRS65_03580 PF07670 Nucleoside recognition LRS65_03580 PF07664 Ferrous iron transport protein B C terminus LRS65_03585 PF07664 Ferrous iron transport protein B C terminus LRS65_03585 PF17910 FeoB cytosolic helical domain LRS65_03585 PF07670 Nucleoside recognition LRS65_03585 PF02421 Ferrous iron transport protein B LRS65_03590 PF04023 FeoA domain LRS65_03590 PF07664 Ferrous iron transport protein B C terminus LRS65_03590 PF07670 Nucleoside recognition LRS65_03590 PF02421 Ferrous iron transport protein B LRS65_03590 PF17910 FeoB cytosolic helical domain LRS65_03595 PF12849 PBP superfamily domain LRS65_03600 PF00528 Binding-protein-dependent transport system inner membrane component LRS65_03605 PF00528 Binding-protein-dependent transport system inner membrane component LRS65_03615 PF00873 AcrB/AcrD/AcrF family LRS65_03735 PF00571 CBS domain LRS65_03750 PF13276 HTH-like domain LRS65_03750 PF00665 Integrase core domain LRS65_03750 PF13333 Integrase core domain LRS65_03765 PF08239 Bacterial SH3 domain LRS65_03765 PF00246 Zinc carboxypeptidase LRS65_03770 PF03070 TENA/THI-4/PQQC family LRS65_03775 PF00005 ABC transporter LRS65_03780 PF00528 Binding-protein-dependent transport system inner membrane component LRS65_03785 PF09084 NMT1/THI5 like LRS65_03790 PF02581 Thiamine monophosphate synthase LRS65_03795 PF01266 FAD dependent oxidoreductase LRS65_03800 PF02597 ThiS family LRS65_03805 PF05690 Thiazole biosynthesis protein ThiG LRS65_03810 PF00899 ThiF family LRS65_03815 PF08543 Phosphomethylpyrimidine kinase LRS65_03840 PF03814 Potassium-transporting ATPase A subunit LRS65_03850 PF02669 K+-transporting ATPase, c chain LRS65_03855 PF02702 Osmosensitive K+ channel His kinase sensor domain LRS65_03860 PF07690 Major Facilitator Superfamily LRS65_03865 PF01047 MarR family LRS65_03875 PF00860 Permease family LRS65_03885 PF03734 L,D-transpeptidase catalytic domain LRS65_03885 PF17969 L,D-transpeptidase C-terminal domain LRS65_03895 PF00294 pfkB family carbohydrate kinase LRS65_03900 PF00251 Glycosyl hydrolases family 32 N-terminal domain LRS65_03900 PF08244 Glycosyl hydrolases family 32 C terminal LRS65_03905 PF00367 phosphotransferase system, EIIB LRS65_03905 PF02378 Phosphotransferase system, EIIC LRS65_03910 PF13407 Periplasmic binding protein domain LRS65_03910 PF00356 Bacterial regulatory proteins, lacI family LRS65_03920 PF00085 Thioredoxin LRS65_03925 PF02600 Disulfide bond formation protein DsbB LRS65_03930 PF14148 YhdB-like protein LRS65_03940 PF03845 Spore germination protein LRS65_03950 PF03323 Bacillus/Clostridium GerA spore germination protein LRS65_03960 PF00881 Nitroreductase family LRS65_03965 PF04293 SpoVR like protein LRS65_03975 PF01614 Bacterial transcriptional regulator LRS65_03975 PF09339 IclR helix-turn-helix domain LRS65_03990 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRS65_03990 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LRS65_03995 PF02583 Metal-sensitive transcriptional repressor LRS65_04000 PF00581 Rhodanese-like domain LRS65_04000 PF01206 Sulfurtransferase TusA LRS65_04005 PF00753 Metallo-beta-lactamase superfamily LRS65_04005 PF00581 Rhodanese-like domain LRS65_04010 PF01206 Sulfurtransferase TusA LRS65_04015 PF01206 Sulfurtransferase TusA LRS65_04015 PF00581 Rhodanese-like domain LRS65_04020 PF00581 Rhodanese-like domain LRS65_04025 PF13686 DsrE/DsrF/DrsH-like family LRS65_04030 PF01925 Sulfite exporter TauE/SafE LRS65_04040 PF03816 Cell envelope-related transcriptional attenuator domain LRS65_04045 PF08240 Alcohol dehydrogenase GroES-like domain LRS65_04045 PF00107 Zinc-binding dehydrogenase LRS65_04050 PF02690 Na+/Pi-cotransporter LRS65_04055 PF07690 Major Facilitator Superfamily LRS65_04065 PF00874 PRD domain LRS65_04065 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LRS65_04065 PF05043 Mga helix-turn-helix domain LRS65_04065 PF08279 HTH domain LRS65_04070 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LRS65_04075 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LRS65_04080 PF02378 Phosphotransferase system, EIIC LRS65_04100 PF06725 3D domain LRS65_04100 PF01476 LysM domain LRS65_04105 PF12704 MacB-like periplasmic core domain LRS65_04105 PF02687 FtsX-like permease family LRS65_04110 PF00005 ABC transporter LRS65_04120 PF09529 Integral membrane protein (intg_mem_TP0381) LRS65_04135 PF05525 Branched-chain amino acid transport protein LRS65_04140 PF05067 Manganese containing catalase LRS65_04145 PF12652 CotJB protein LRS65_04150 PF11007 Spore coat associated protein JA (CotJA) LRS65_04165 PF02735 Ku70/Ku80 beta-barrel domain LRS65_04175 PF09335 SNARE associated Golgi protein LRS65_04210 PF13520 Amino acid permease LRS65_04215 PF00999 Sodium/hydrogen exchanger family LRS65_04225 PF01380 SIS domain LRS65_04225 PF01418 Helix-turn-helix domain, rpiR family LRS65_04230 PF13580 SIS domain LRS65_04235 PF00367 phosphotransferase system, EIIB LRS65_04235 PF02378 Phosphotransferase system, EIIC LRS65_04245 PF07681 DoxX LRS65_04260 PF00892 EamA-like transporter family LRS65_04265 PF01037 Lrp/AsnC ligand binding domain LRS65_04275 PF00106 short chain dehydrogenase LRS65_04280 PF13411 MerR HTH family regulatory protein LRS65_04290 PF00893 Small Multidrug Resistance protein LRS65_04300 PF17934 Tetracyclin repressor-like, C-terminal domain LRS65_04300 PF00440 Bacterial regulatory proteins, tetR family LRS65_04305 PF07690 Major Facilitator Superfamily LRS65_04310 PF01638 HxlR-like helix-turn-helix LRS65_04320 PF02525 Flavodoxin-like fold LRS65_04325 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LRS65_04325 PF12793 Sugar transport-related sRNA regulator N-term LRS65_04330 PF07690 Major Facilitator Superfamily LRS65_04345 PF01965 DJ-1/PfpI family LRS65_04355 PF13520 Amino acid permease LRS65_04360 PF01177 Asp/Glu/Hydantoin racemase LRS65_04370 PF00171 Aldehyde dehydrogenase family LRS65_04375 PF00664 ABC transporter transmembrane region LRS65_04375 PF00005 ABC transporter LRS65_04380 PF00005 ABC transporter LRS65_04380 PF00664 ABC transporter transmembrane region LRS65_04385 PF00497 Bacterial extracellular solute-binding proteins, family 3 LRS65_04390 PF00528 Binding-protein-dependent transport system inner membrane component LRS65_04395 PF00005 ABC transporter LRS65_04400 PF00269 Small, acid-soluble spore proteins, alpha/beta type LRS65_04410 PF14398 YheC/D like ATP-grasp LRS65_04420 PF04286 Protein of unknown function (DUF445) LRS65_04425 PF06133 Control of competence regulator ComK, YlbF/YmcA LRS65_04440 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LRS65_04440 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LRS65_04440 PF00205 Thiamine pyrophosphate enzyme, central domain LRS65_04445 PF03306 Alpha-acetolactate decarboxylase LRS65_04450 PF02245 Methylpurine-DNA glycosylase (MPG) LRS65_04460 PF17961 Bacterial Ig domain LRS65_04460 PF00746 LPXTG cell wall anchor motif LRS65_04460 PF17210 SdrD B-like domain LRS65_04460 PF10425 C-terminus of bacterial fibrinogen-binding adhesin LRS65_04460 PF04650 YSIRK type signal peptide LRS65_04465 PF01510 N-acetylmuramoyl-L-alanine amidase LRS65_04465 PF01471 Putative peptidoglycan binding domain LRS65_04470 PF04055 Radical SAM superfamily LRS65_04475 PF00501 AMP-binding enzyme LRS65_04475 PF13193 AMP-binding enzyme C-terminal domain LRS65_04490 PF01740 STAS domain LRS65_04490 PF00916 Sulfate permease family LRS65_04495 PF14667 Polysaccharide biosynthesis C-terminal domain LRS65_04495 PF01943 Polysaccharide biosynthesis protein LRS65_04515 PF00378 Enoyl-CoA hydratase/isomerase LRS65_04535 PF05343 M42 glutamyl aminopeptidase LRS65_04540 PF01520 N-acetylmuramoyl-L-alanine amidase LRS65_04540 PF00395 S-layer homology domain LRS65_04550 PF11121 Protein of unknown function (DUF2639) LRS65_04555 PF05544 Proline racemase LRS65_04560 PF02423 Ornithine cyclodeaminase/mu-crystallin family LRS65_04570 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LRS65_04575 PF00528 Binding-protein-dependent transport system inner membrane component LRS65_04580 PF00528 Binding-protein-dependent transport system inner membrane component LRS65_04580 PF12911 N-terminal TM domain of oligopeptide transport permease C LRS65_04585 PF00005 ABC transporter LRS65_04585 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LRS65_04590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LRS65_04590 PF00005 ABC transporter LRS65_04615 PF00753 Metallo-beta-lactamase superfamily LRS65_04615 PF16123 Hydroxyacylglutathione hydrolase C-terminus LRS65_04635 PF02423 Ornithine cyclodeaminase/mu-crystallin family LRS65_04640 PF06013 Proteins of 100 residues with WXG LRS65_04655 PF04740 LXG domain of WXG superfamily LRS65_04655 PF14436 Bacterial EndoU nuclease LRS65_04665 PF00083 Sugar (and other) transporter LRS65_04675 PF12431 Transcriptional regulator LRS65_04675 PF08279 HTH domain LRS65_04675 PF00072 Response regulator receiver domain LRS65_04680 PF03401 Tripartite tricarboxylate transporter family receptor LRS65_04685 PF00293 NUDIX domain LRS65_04690 PF08463 EcoEI R protein C-terminal LRS65_04690 PF00271 Helicase conserved C-terminal domain LRS65_04690 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) LRS65_04690 PF04851 Type III restriction enzyme, res subunit LRS65_04715 PF01925 Sulfite exporter TauE/SafE LRS65_04730 PF07690 Major Facilitator Superfamily LRS65_04740 PF09680 Family of unknown function LRS65_04745 PF13302 Acetyltransferase (GNAT) domain LRS65_04815 PF01066 CDP-alcohol phosphatidyltransferase LRS65_04830 PF02733 Dak1 domain LRS65_04840 PF02733 Dak1 domain LRS65_04870 PF00395 S-layer homology domain LRS65_04915 PF11181 Heat induced stress protein YflT LRS65_04935 PF01740 STAS domain LRS65_04940 PF13581 Histidine kinase-like ATPase domain LRS65_04945 PF04545 Sigma-70, region 4 LRS65_04945 PF04542 Sigma-70 region 2 LRS65_04945 PF04539 Sigma-70 region 3 LRS65_04955 PF13426 PAS domain LRS65_04955 PF07228 Stage II sporulation protein E (SpoIIE) LRS65_04960 PF01739 CheR methyltransferase, SAM binding domain LRS65_04960 PF03705 CheR methyltransferase, all-alpha domain LRS65_04965 PF00672 HAMP domain LRS65_04965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_04965 PF00512 His Kinase A (phospho-acceptor) domain LRS65_04965 PF01627 Hpt domain LRS65_04965 PF00072 Response regulator receiver domain LRS65_04965 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LRS65_04990 PF01906 Putative heavy-metal-binding LRS65_05005 PF07282 Putative transposase DNA-binding domain LRS65_05005 PF01385 Probable transposase LRS65_05005 PF12323 Helix-turn-helix domain LRS65_05010 PF08240 Alcohol dehydrogenase GroES-like domain LRS65_05010 PF00107 Zinc-binding dehydrogenase LRS65_05015 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family LRS65_05020 PF11121 Protein of unknown function (DUF2639) LRS65_05035 PF00149 Calcineurin-like phosphoesterase LRS65_05040 PF13514 AAA domain LRS65_05045 PF01966 HD domain LRS65_05045 PF01336 OB-fold nucleic acid binding domain LRS65_05050 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LRS65_05055 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LRS65_05070 PF00561 alpha/beta hydrolase fold LRS65_05070 PF08386 TAP-like protein LRS65_05075 PF14147 Sporulation protein YhaL LRS65_05090 PF00190 Cupin LRS65_05095 PF01381 Helix-turn-helix LRS65_05100 PF04309 Glycerol-3-phosphate responsive antiterminator LRS65_05105 PF00230 Major intrinsic protein LRS65_05110 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LRS65_05110 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LRS65_05115 PF01266 FAD dependent oxidoreductase LRS65_05115 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LRS65_05120 PF03551 Transcriptional regulator PadR-like family LRS65_05130 PF04542 Sigma-70 region 2 LRS65_05130 PF08281 Sigma-70, region 4 LRS65_05140 PF01098 Cell cycle protein LRS65_05145 PF13538 UvrD-like helicase C-terminal domain LRS65_05165 PF01047 MarR family LRS65_05170 PF12732 YtxH-like protein LRS65_05175 PF01230 HIT domain LRS65_05180 PF00005 ABC transporter LRS65_05185 PF05975 Bacterial ABC transporter protein EcsB LRS65_05190 PF12787 EcsC protein family LRS65_05200 PF00440 Bacterial regulatory proteins, tetR family LRS65_05200 PF17934 Tetracyclin repressor-like, C-terminal domain LRS65_05210 PF03703 Bacterial PH domain LRS65_05215 PF03703 Bacterial PH domain LRS65_05240 PF10014 2OG-Fe dioxygenase LRS65_05250 PF00892 EamA-like transporter family LRS65_05255 PF03703 Bacterial PH domain LRS65_05260 PF03703 Bacterial PH domain LRS65_05265 PF03992 Antibiotic biosynthesis monooxygenase LRS65_05270 PF00912 Transglycosylase LRS65_05270 PF00905 Penicillin binding protein transpeptidase domain LRS65_05275 PF01208 Uroporphyrinogen decarboxylase (URO-D) LRS65_05280 PF00762 Ferrochelatase LRS65_05310 PF03965 Penicillinase repressor LRS65_05320 PF17932 Tetracyclin repressor-like, C-terminal domain LRS65_05320 PF00440 Bacterial regulatory proteins, tetR family LRS65_05350 PF00356 Bacterial regulatory proteins, lacI family LRS65_05355 PF14149 YhfH-like protein LRS65_05360 PF12706 Beta-lactamase superfamily domain LRS65_05365 PF03099 Biotin/lipoate A/B protein ligase family LRS65_05365 PF10437 Bacterial lipoate protein ligase C-terminus LRS65_05375 PF13193 AMP-binding enzyme C-terminal domain LRS65_05375 PF00501 AMP-binding enzyme LRS65_05380 PF00395 S-layer homology domain LRS65_05380 PF01520 N-acetylmuramoyl-L-alanine amidase LRS65_05390 PF00528 Binding-protein-dependent transport system inner membrane component LRS65_05395 PF00528 Binding-protein-dependent transport system inner membrane component LRS65_05400 PF00005 ABC transporter LRS65_05400 PF17850 CysA C-terminal regulatory domain LRS65_05400 PF12857 TOBE-like domain LRS65_05405 PF07968 Leukocidin/Hemolysin toxin family LRS65_05415 PF00149 Calcineurin-like phosphoesterase LRS65_05420 PF01966 HD domain LRS65_05430 PF04542 Sigma-70 region 2 LRS65_05430 PF08281 Sigma-70, region 4 LRS65_05435 PF12833 Helix-turn-helix domain LRS65_05435 PF06445 GyrI-like small molecule binding domain LRS65_05445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_05445 PF00512 His Kinase A (phospho-acceptor) domain LRS65_05450 PF00072 Response regulator receiver domain LRS65_05450 PF00486 Transcriptional regulatory protein, C terminal LRS65_05470 PF01435 Peptidase family M48 LRS65_05470 PF16491 CAAX prenyl protease N-terminal, five membrane helices LRS65_05475 PF02743 Cache domain LRS65_05475 PF00672 HAMP domain LRS65_05475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LRS65_05480 PF02018 Carbohydrate binding domain LRS65_05480 PF00395 S-layer homology domain LRS65_05480 PF00331 Glycosyl hydrolase family 10 LRS65_05480 PF06452 Carbohydrate family 9 binding domain-like LRS65_05490 PF01274 Malate synthase LRS65_05515 PF00313 'Cold-shock' DNA-binding domain LRS65_05535 PF09335 SNARE associated Golgi protein LRS65_05540 PF10502 Signal peptidase, peptidase S26 LRS65_05545 PF12705 PD-(D/E)XK nuclease superfamily LRS65_05545 PF13361 UvrD-like helicase C-terminal domain LRS65_05550 PF12705 PD-(D/E)XK nuclease superfamily LRS65_05550 PF00580 UvrD/REP helicase N-terminal domain LRS65_05550 PF13361 UvrD-like helicase C-terminal domain LRS65_05560 PF10676 Spore germination protein gerPA/gerPF LRS65_05565 PF10970 Spore germination protein GerPE LRS65_05575 PF10737 Spore germination protein GerPC LRS65_05580 PF10803 Spore germination GerPB LRS65_05585 PF10676 Spore germination protein gerPA/gerPF LRS65_05590 PF09388 Spo0E like sporulation regulatory protein LRS65_05595 PF01557 Fumarylacetoacetate (FAA) hydrolase family LRS65_05605 PF00202 Aminotransferase class-III LRS65_05610 PF07457 Protein of unknown function (DUF1516) LRS65_05620 PF00733 Asparagine synthase LRS65_05620 PF13537 Glutamine amidotransferase domain LRS65_05625 PF00762 Ferrochelatase LRS65_05630 PF00199 Catalase LRS65_05630 PF06628 Catalase-related immune-responsive LRS65_05635 PF00909 Ammonium Transporter Family LRS65_05640 PF00128 Alpha amylase, catalytic domain LRS65_05650 PF04461 Protein of unknown function (DUF520) LRS65_05655 PF13509 S1 domain LRS65_05655 PF17783 CvfB-like winged helix domain LRS65_05670 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LRS65_05670 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LRS65_05675 PF12758 Protein of unknown function (DUF3813) LRS65_05690 PF14168 YjzC-like protein LRS65_05695 PF00004 ATPase family associated with various cellular activities (AAA) LRS65_05695 PF10431 C-terminal, D2-small domain, of ClpB protein LRS65_05695 PF02861 Clp amino terminal domain, pathogenicity island component LRS65_05695 PF17871 AAA lid domain LRS65_05695 PF07724 AAA domain (Cdc48 subfamily) LRS65_05715 PF10815 ComZ LRS65_05720 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LRS65_05720 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LRS65_05725 PF00109 Beta-ketoacyl synthase, N-terminal domain LRS65_05725 PF02801 Beta-ketoacyl synthase, C-terminal domain LRS65_05730 PF10026 Predicted Zn-dependent protease (DUF2268) LRS65_05735 PF12227 Protein of unknown function (DUF3603) LRS65_05740 PF00579 tRNA synthetases class I (W and Y) LRS65_05750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LRS65_05755 PF00528 Binding-protein-dependent transport system inner membrane component LRS65_05760 PF12911 N-terminal TM domain of oligopeptide transport permease C LRS65_05760 PF00528 Binding-protein-dependent transport system inner membrane component LRS65_05765 PF00005 ABC transporter LRS65_05765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LRS65_05770 PF00005 ABC transporter LRS65_05770 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LRS65_05775 PF01554 MatE LRS65_05780 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LRS65_05790 PF03960 ArsC family LRS65_05795 PF03741 Integral membrane protein TerC family LRS65_05800 PF05389 Negative regulator of genetic competence (MecA) LRS65_05805 PF13091 PLD-like domain LRS65_05805 PF13396 Phospholipase_D-nuclease N-terminal LRS65_05815 PF08439 Oligopeptidase F LRS65_05815 PF01432 Peptidase family M3 LRS65_05830 PF01152 Bacterial-like globin LRS65_05835 PF01928 CYTH domain LRS65_05845 PF04607 Region found in RelA / SpoT proteins LRS65_05850 PF01513 ATP-NAD kinase LRS65_05855 PF00849 RNA pseudouridylate synthase LRS65_05865 PF00149 Calcineurin-like phosphoesterase LRS65_05870 PF01098 Cell cycle protein LRS65_05875 PF00535 Glycosyl transferase family 2 LRS65_05880 PF08241 Methyltransferase domain LRS65_05885 PF05711 Macrocin-O-methyltransferase (TylF) LRS65_05895 PF00535 Glycosyl transferase family 2 LRS65_05895 PF13181 Tetratricopeptide repeat LRS65_05915 PF00483 Nucleotidyl transferase LRS65_05920 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LRS65_05925 PF16363 GDP-mannose 4,6 dehydratase LRS65_05930 PF04321 RmlD substrate binding domain LRS65_05950 PF07098 Protein of unknown function (DUF1360) LRS65_05970 PF00580 UvrD/REP helicase N-terminal domain LRS65_05970 PF13361 UvrD-like helicase C-terminal domain LRS65_05975 PF13673 Acetyltransferase (GNAT) domain LRS65_05985 PF00756 Putative esterase LRS65_06005 PF02368 Bacterial Ig-like domain (group 2) LRS65_06010 PF00474 Sodium:solute symporter family LRS65_06015 PF04715 Anthranilate synthase component I, N terminal region LRS65_06015 PF00425 chorismate binding enzyme LRS65_06020 PF00117 Glutamine amidotransferase class-I LRS65_06020 PF00591 Glycosyl transferase family, a/b domain LRS65_06020 PF02885 Glycosyl transferase family, helical bundle domain LRS65_06025 PF02885 Glycosyl transferase family, helical bundle domain LRS65_06025 PF00591 Glycosyl transferase family, a/b domain LRS65_06030 PF00218 Indole-3-glycerol phosphate synthase LRS65_06035 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LRS65_06040 PF00291 Pyridoxal-phosphate dependent enzyme LRS65_06045 PF00290 Tryptophan synthase alpha chain LRS65_06055 PF02652 L-lactate permease LRS65_06060 PF10042 Uncharacterized conserved protein (DUF2278) LRS65_06085 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRS65_06085 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LRS65_06100 PF00881 Nitroreductase family LRS65_06115 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LRS65_06115 PF02817 e3 binding domain LRS65_06115 PF00364 Biotin-requiring enzyme LRS65_06120 PF02779 Transketolase, pyrimidine binding domain LRS65_06120 PF16870 2-oxoglutarate dehydrogenase C-terminal LRS65_06120 PF00676 Dehydrogenase E1 component LRS65_06125 PF01381 Helix-turn-helix LRS65_06185 PF07943 Penicillin-binding protein 5, C-terminal domain LRS65_06185 PF00768 D-alanyl-D-alanine carboxypeptidase LRS65_06195 PF12389 Camelysin metallo-endopeptidase LRS65_06205 PF12389 Camelysin metallo-endopeptidase LRS65_06210 PF01381 Helix-turn-helix LRS65_06210 PF08671 Anti-repressor SinI LRS65_06220 PF05547 Immune inhibitor A peptidase M6 LRS65_06225 PF00171 Aldehyde dehydrogenase family LRS65_06230 PF00005 ABC transporter LRS65_06230 PF08402 TOBE domain LRS65_06235 PF00528 Binding-protein-dependent transport system inner membrane component LRS65_06240 PF00528 Binding-protein-dependent transport system inner membrane component LRS65_06245 PF13416 Bacterial extracellular solute-binding protein LRS65_06250 PF01569 PAP2 superfamily LRS65_06255 PF03176 MMPL family LRS65_06265 PF01479 S4 domain LRS65_06265 PF00849 RNA pseudouridylate synthase LRS65_06275 PF00188 Cysteine-rich secretory protein family LRS65_06280 PF02754 Cysteine-rich domain LRS65_06280 PF13183 4Fe-4S dicluster domain LRS65_06285 PF01565 FAD binding domain LRS65_06285 PF02913 FAD linked oxidases, C-terminal domain LRS65_06290 PF13556 PucR C-terminal helix-turn-helix domain LRS65_06290 PF17853 GGDEF-like domain LRS65_06290 PF05651 Putative sugar diacid recognition LRS65_06300 PF00486 Transcriptional regulatory protein, C terminal LRS65_06300 PF00072 Response regulator receiver domain LRS65_06305 PF18698 Histidine kinase sensor domain LRS65_06305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_06305 PF00512 His Kinase A (phospho-acceptor) domain LRS65_06305 PF00989 PAS fold LRS65_06305 PF00672 HAMP domain LRS65_06310 PF07729 FCD domain LRS65_06310 PF00392 Bacterial regulatory proteins, gntR family LRS65_06315 PF02754 Cysteine-rich domain LRS65_06320 PF11870 Domain of unknown function (DUF3390) LRS65_06320 PF13183 4Fe-4S dicluster domain LRS65_06320 PF02589 LUD domain LRS65_06325 PF02589 LUD domain LRS65_06330 PF06750 Bacterial Peptidase A24 N-terminal domain LRS65_06330 PF01478 Type IV leader peptidase family LRS65_06340 PF01226 Formate/nitrite transporter LRS65_06345 PF03741 Integral membrane protein TerC family LRS65_06350 PF02386 Cation transport protein LRS65_06355 PF00269 Small, acid-soluble spore proteins, alpha/beta type LRS65_06360 PF01575 MaoC like domain LRS65_06385 PF00561 alpha/beta hydrolase fold LRS65_06395 PF02386 Cation transport protein LRS65_06415 PF00005 ABC transporter LRS65_06415 PF08402 TOBE domain LRS65_06420 PF00528 Binding-protein-dependent transport system inner membrane component LRS65_06425 PF13419 Haloacid dehalogenase-like hydrolase LRS65_06430 PF00266 Aminotransferase class-V LRS65_06440 PF08220 DeoR-like helix-turn-helix domain LRS65_06440 PF00455 DeoR C terminal sensor domain LRS65_06450 PF00596 Class II Aldolase and Adducin N-terminal domain LRS65_06460 PF04748 Divergent polysaccharide deacetylase LRS65_06465 PF09388 Spo0E like sporulation regulatory protein LRS65_06470 PF02743 Cache domain LRS65_06470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_06470 PF00512 His Kinase A (phospho-acceptor) domain LRS65_06475 PF01047 MarR family LRS65_06485 PF12867 DinB superfamily LRS65_06495 PF13188 PAS domain LRS65_06495 PF00512 His Kinase A (phospho-acceptor) domain LRS65_06495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_06495 PF13426 PAS domain LRS65_06495 PF00989 PAS fold LRS65_06500 PF06508 Queuosine biosynthesis protein QueC LRS65_06505 PF01242 6-pyruvoyl tetrahydropterin synthase LRS65_06510 PF04055 Radical SAM superfamily LRS65_06515 PF14489 QueF-like protein LRS65_06520 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) LRS65_06550 PF07972 NrdI Flavodoxin like LRS65_06555 PF08343 Ribonucleotide reductase N-terminal LRS65_06555 PF00317 Ribonucleotide reductase, all-alpha domain LRS65_06555 PF02867 Ribonucleotide reductase, barrel domain LRS65_06560 PF00268 Ribonucleotide reductase, small chain LRS65_06565 PF00392 Bacterial regulatory proteins, gntR family LRS65_06570 PF00005 ABC transporter LRS65_06580 PF00005 ABC transporter LRS65_06590 PF02517 CPBP intramembrane metalloprotease LRS65_06600 PF01037 Lrp/AsnC ligand binding domain LRS65_06610 PF00857 Isochorismatase family LRS65_06620 PF02016 LD-carboxypeptidase N-terminal domain LRS65_06620 PF17676 LD-carboxypeptidase C-terminal domain LRS65_06625 PF03060 Nitronate monooxygenase LRS65_06630 PF04914 DltD protein LRS65_06635 PF00550 Phosphopantetheine attachment site LRS65_06640 PF03062 MBOAT, membrane-bound O-acyltransferase family LRS65_06645 PF00501 AMP-binding enzyme LRS65_06645 PF13193 AMP-binding enzyme C-terminal domain LRS65_06655 PF01546 Peptidase family M20/M25/M40 LRS65_06655 PF07687 Peptidase dimerisation domain LRS65_06665 PF00258 Flavodoxin LRS65_06700 PF01554 MatE LRS65_06705 PF02673 Bacitracin resistance protein BacA LRS65_06720 PF01047 MarR family LRS65_06730 PF00375 Sodium:dicarboxylate symporter family LRS65_06735 PF02386 Cation transport protein LRS65_06745 PF09579 Sporulation protein YtfJ (Spore_YtfJ) LRS65_06755 PF03698 Uncharacterised protein family (UPF0180) LRS65_06765 PF01063 Amino-transferase class IV LRS65_06770 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LRS65_06770 PF00205 Thiamine pyrophosphate enzyme, central domain LRS65_06770 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LRS65_06775 PF10369 Small subunit of acetolactate synthase LRS65_06775 PF01842 ACT domain LRS65_06780 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LRS65_06780 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LRS65_06785 PF08502 LeuA allosteric (dimerisation) domain LRS65_06785 PF00682 HMGL-like LRS65_06790 PF00180 Isocitrate/isopropylmalate dehydrogenase LRS65_06795 PF00330 Aconitase family (aconitate hydratase) LRS65_06800 PF00694 Aconitase C-terminal domain LRS65_06805 PF13393 Histidyl-tRNA synthetase LRS65_06810 PF01634 ATP phosphoribosyltransferase LRS65_06815 PF00815 Histidinol dehydrogenase LRS65_06820 PF00475 Imidazoleglycerol-phosphate dehydratase LRS65_06825 PF00117 Glutamine amidotransferase class-I LRS65_06830 PF00977 Histidine biosynthesis protein LRS65_06835 PF00977 Histidine biosynthesis protein LRS65_06840 PF01502 Phosphoribosyl-AMP cyclohydrolase LRS65_06845 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LRS65_06850 PF02811 PHP domain LRS65_06860 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LRS65_06860 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LRS65_06865 PF01066 CDP-alcohol phosphatidyltransferase LRS65_06870 PF00884 Sulfatase LRS65_06880 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LRS65_06880 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LRS65_06890 PF01507 Phosphoadenosine phosphosulfate reductase family LRS65_06895 PF01747 ATP-sulfurylase LRS65_06895 PF14306 PUA-like domain LRS65_06905 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LRS65_06905 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LRS65_06915 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LRS65_06920 PF01903 CbiX LRS65_06930 PF00209 Sodium:neurotransmitter symporter family LRS65_06945 PF00375 Sodium:dicarboxylate symporter family LRS65_06955 PF03553 Na+/H+ antiporter family LRS65_06970 PF09922 Cell wall-active antibiotics response 4TMS YvqF LRS65_06975 PF00672 HAMP domain LRS65_06975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_06975 PF07730 Histidine kinase LRS65_06980 PF00196 Bacterial regulatory proteins, luxR family LRS65_06980 PF00072 Response regulator receiver domain LRS65_06990 PF05525 Branched-chain amino acid transport protein LRS65_07000 PF01209 ubiE/COQ5 methyltransferase family LRS65_07025 PF00970 Oxidoreductase FAD-binding domain LRS65_07025 PF00042 Globin LRS65_07025 PF00175 Oxidoreductase NAD-binding domain LRS65_07040 PF01925 Sulfite exporter TauE/SafE LRS65_07045 PF01384 Phosphate transporter family LRS65_07050 PF01865 Protein of unknown function DUF47 LRS65_07055 PF00905 Penicillin binding protein transpeptidase domain LRS65_07055 PF00912 Transglycosylase LRS65_07070 PF00989 PAS fold LRS65_07070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_07070 PF00512 His Kinase A (phospho-acceptor) domain LRS65_07075 PF01904 Protein of unknown function DUF72 LRS65_07085 PF00589 Phage integrase family LRS65_07090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_07090 PF16736 Single Cache-like LRS65_07090 PF00512 His Kinase A (phospho-acceptor) domain LRS65_07090 PF00989 PAS fold LRS65_07095 PF01048 Phosphorylase superfamily LRS65_07105 PF03706 Lysylphosphatidylglycerol synthase TM region LRS65_07105 PF09924 Uncharacterised conserved protein (DUF2156) LRS65_07120 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LRS65_07120 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LRS65_07125 PF07943 Penicillin-binding protein 5, C-terminal domain LRS65_07125 PF00768 D-alanyl-D-alanine carboxypeptidase LRS65_07130 PF07670 Nucleoside recognition LRS65_07135 PF07670 Nucleoside recognition LRS65_07140 PF01479 S4 domain LRS65_07140 PF00849 RNA pseudouridylate synthase LRS65_07145 PF00578 AhpC/TSA family LRS65_07150 PF05140 ResB-like family LRS65_07155 PF01578 Cytochrome C assembly protein LRS65_07160 PF00072 Response regulator receiver domain LRS65_07160 PF00486 Transcriptional regulatory protein, C terminal LRS65_07165 PF00512 His Kinase A (phospho-acceptor) domain LRS65_07165 PF00989 PAS fold LRS65_07165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_07165 PF18698 Histidine kinase sensor domain LRS65_07165 PF00672 HAMP domain LRS65_07170 PF01923 Cobalamin adenosyltransferase LRS65_07185 PF12822 ECF transporter, substrate-specific component LRS65_07200 PF00270 DEAD/DEAH box helicase LRS65_07200 PF00271 Helicase conserved C-terminal domain LRS65_07205 PF02517 CPBP intramembrane metalloprotease LRS65_07215 PF00149 Calcineurin-like phosphoesterase LRS65_07220 PF13411 MerR HTH family regulatory protein LRS65_07225 PF05389 Negative regulator of genetic competence (MecA) LRS65_07230 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LRS65_07230 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LRS65_07255 PF17763 Glutaminase/Asparaginase C-terminal domain LRS65_07255 PF00710 Asparaginase, N-terminal LRS65_07265 PF02224 Cytidylate kinase LRS65_07270 PF00575 S1 RNA binding domain LRS65_07275 PF01070 FMN-dependent dehydrogenase LRS65_07280 PF14140 YpzI-like protein LRS65_07290 PF14045 YIEGIA protein LRS65_07300 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LRS65_07300 PF01926 50S ribosome-binding GTPase LRS65_07305 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LRS65_07305 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LRS65_07315 PF10966 Protein of unknown function (DUF2768) LRS65_07325 PF09547 Stage IV sporulation protein A (spore_IV_A) LRS65_07330 PF00216 Bacterial DNA-binding protein LRS65_07335 PF01227 GTP cyclohydrolase I LRS65_07340 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 LRS65_07345 PF01209 ubiE/COQ5 methyltransferase family LRS65_07350 PF00348 Polyprenyl synthetase LRS65_07355 PF00334 Nucleoside diphosphate kinase LRS65_07360 PF01264 Chorismate synthase LRS65_07365 PF01761 3-dehydroquinate synthase LRS65_07370 PF00155 Aminotransferase class I and II LRS65_07380 PF08858 IDEAL domain LRS65_07380 PF08864 UPF0302 domain LRS65_07385 PF10673 Protein of unknown function (DUF2487) LRS65_07390 PF00355 Rieske [2Fe-2S] domain LRS65_07395 PF00033 Cytochrome b/b6/petB LRS65_07400 PF00032 Cytochrome b(C-terminal)/b6/petD LRS65_07400 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LRS65_07405 PF07187 Protein of unknown function (DUF1405) LRS65_07415 PF09577 Sporulation protein YpjB (SpoYpjB) LRS65_07420 PF04298 Putative neutral zinc metallopeptidase LRS65_07430 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LRS65_07430 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LRS65_07435 PF03819 MazG nucleotide pyrophosphohydrolase domain LRS65_07440 PF05173 Dihydrodipicolinate reductase, C-terminus LRS65_07440 PF01113 Dihydrodipicolinate reductase, N-terminus LRS65_07445 PF02142 MGS-like domain LRS65_07450 PF02585 GlcNAc-PI de-N-acetylase LRS65_07455 PF13439 Glycosyltransferase Family 4 LRS65_07455 PF00534 Glycosyl transferases group 1 LRS65_07460 PF01743 Poly A polymerase head domain LRS65_07460 PF12627 Probable RNA and SrmB- binding site of polymerase A LRS65_07460 PF13735 tRNA nucleotidyltransferase domain 2 putative LRS65_07465 PF02237 Biotin protein ligase C terminal domain LRS65_07465 PF08279 HTH domain LRS65_07465 PF03099 Biotin/lipoate A/B protein ligase family LRS65_07475 PF02548 Ketopantoate hydroxymethyltransferase LRS65_07480 PF02569 Pantoate-beta-alanine ligase LRS65_07485 PF02261 Aspartate decarboxylase LRS65_07490 PF04851 Type III restriction enzyme, res subunit LRS65_07490 PF00929 Exonuclease LRS65_07490 PF13307 Helicase C-terminal domain LRS65_07495 PF14084 Protein of unknown function (DUF4264) LRS65_07505 PF00155 Aminotransferase class I and II LRS65_07510 PF07261 Replication initiation and membrane attachment LRS65_07515 PF10576 Iron-sulfur binding domain of endonuclease III LRS65_07515 PF00730 HhH-GPD superfamily base excision DNA repair protein LRS65_07515 PF00633 Helix-hairpin-helix motif LRS65_07525 PF00912 Transglycosylase LRS65_07525 PF00905 Penicillin binding protein transpeptidase domain LRS65_07530 PF03838 Recombination protein U LRS65_07535 PF10720 Protein of unknown function (DUF2515) LRS65_07565 PF06908 YspA SLOG family LRS65_07570 PF05103 DivIVA protein LRS65_07580 PF01170 Putative RNA methylase family UPF0020 LRS65_07580 PF02926 THUMP domain LRS65_07590 PF13307 Helicase C-terminal domain LRS65_07595 PF02074 Carboxypeptidase Taq (M32) metallopeptidase LRS65_07605 PF00557 Metallopeptidase family M24 LRS65_07610 PF00156 Phosphoribosyl transferase domain LRS65_07615 PF00860 Permease family LRS65_07620 PF04235 Protein of unknown function (DUF418) LRS65_07625 PF00350 Dynamin family LRS65_07635 PF00583 Acetyltransferase (GNAT) family LRS65_07640 PF10752 Protein of unknown function (DUF2533) LRS65_07645 PF00581 Rhodanese-like domain LRS65_07680 PF00689 Cation transporting ATPase, C-terminus LRS65_07680 PF00690 Cation transporter/ATPase, N-terminus LRS65_07685 PF01367 5'-3' exonuclease, C-terminal SAM fold LRS65_07685 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LRS65_07700 PF13807 G-rich domain on putative tyrosine kinase LRS65_07700 PF02706 Chain length determinant protein LRS65_07710 PF02397 Bacterial sugar transferase LRS65_07725 PF00535 Glycosyl transferase family 2 LRS65_07730 PF13439 Glycosyltransferase Family 4 LRS65_07730 PF00534 Glycosyl transferases group 1 LRS65_07745 PF13673 Acetyltransferase (GNAT) domain LRS65_07745 PF18014 Acetyltransferase (GNAT) domain LRS65_07765 PF13456 Reverse transcriptase-like LRS65_07770 PF01263 Aldose 1-epimerase LRS65_07795 PF00313 'Cold-shock' DNA-binding domain LRS65_07800 PF08892 YqcI/YcgG family LRS65_07805 PF01810 LysE type translocator LRS65_07825 PF00474 Sodium:solute symporter family LRS65_07830 PF00202 Aminotransferase class-III LRS65_07840 PF00999 Sodium/hydrogen exchanger family LRS65_07845 PF17770 Ribonuclease J C-terminal domain LRS65_07845 PF00753 Metallo-beta-lactamase superfamily LRS65_07845 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LRS65_07850 PF06445 GyrI-like small molecule binding domain LRS65_07850 PF13411 MerR HTH family regulatory protein LRS65_07860 PF04239 Protein of unknown function (DUF421) LRS65_07865 PF02698 DUF218 domain LRS65_07875 PF00881 Nitroreductase family LRS65_07900 PF17209 Hfq protein LRS65_07910 PF01618 MotA/TolQ/ExbB proton channel family LRS65_07915 PF00691 OmpA family LRS65_07915 PF13677 Membrane MotB of proton-channel complex MotA/MotB LRS65_07920 PF00072 Response regulator receiver domain LRS65_07925 PF01584 CheW-like domain LRS65_07925 PF02895 Signal transducing histidine kinase, homodimeric domain LRS65_07925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_07925 PF01627 Hpt domain LRS65_07925 PF07194 P2 response regulator binding domain LRS65_07930 PF04509 CheC-like family LRS65_07930 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LRS65_07945 PF03705 CheR methyltransferase, all-alpha domain LRS65_07945 PF01739 CheR methyltransferase, SAM binding domain LRS65_07965 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LRS65_07965 PF00460 Flagella basal body rod protein LRS65_07970 PF00669 Bacterial flagellin N-terminal helical region LRS65_07970 PF00700 Bacterial flagellin C-terminal helical region LRS65_07975 PF07195 Flagellar hook-associated protein 2 C-terminus LRS65_07975 PF02465 Flagellar hook-associated protein 2 N-terminus LRS65_07975 PF07196 Flagellin hook IN motif LRS65_07990 PF00460 Flagella basal body rod protein LRS65_07995 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LRS65_07995 PF00460 Flagella basal body rod protein LRS65_08000 PF02049 Flagellar hook-basal body complex protein FliE LRS65_08005 PF01514 Secretory protein of YscJ/FliF family LRS65_08005 PF08345 Flagellar M-ring protein C-terminal LRS65_08010 PF14842 FliG N-terminal domain LRS65_08010 PF01706 FliG C-terminal domain LRS65_08010 PF14841 FliG middle domain LRS65_08020 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LRS65_08020 PF18269 T3SS EscN ATPase C-terminal domain LRS65_08020 PF02874 ATP synthase alpha/beta family, beta-barrel domain LRS65_08040 PF07559 Flagellar basal body protein FlaE LRS65_08040 PF00460 Flagella basal body rod protein LRS65_08040 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LRS65_08055 PF01584 CheW-like domain LRS65_08055 PF00072 Response regulator receiver domain LRS65_08060 PF12181 DNA binding domain of the motility gene repressor (MogR) LRS65_08065 PF00700 Bacterial flagellin C-terminal helical region LRS65_08065 PF00669 Bacterial flagellin N-terminal helical region LRS65_08070 PF00669 Bacterial flagellin N-terminal helical region LRS65_08070 PF00700 Bacterial flagellin C-terminal helical region LRS65_08075 PF01464 Transglycosylase SLT domain LRS65_08085 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LRS65_08085 PF02154 Flagellar motor switch protein FliM LRS65_08090 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LRS65_08090 PF04509 CheC-like family LRS65_08100 PF00813 FliP family LRS65_08105 PF01313 Bacterial export proteins, family 3 LRS65_08115 PF01312 FlhB HrpN YscU SpaS Family LRS65_08120 PF00771 FHIPEP family LRS65_08125 PF00448 SRP54-type protein, GTPase domain LRS65_08130 PF00460 Flagella basal body rod protein LRS65_08130 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LRS65_08135 PF02272 DHHA1 domain LRS65_08135 PF01411 tRNA synthetases class II (A) LRS65_08135 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LRS65_08170 PF03992 Antibiotic biosynthesis monooxygenase LRS65_08175 PF08141 Small acid-soluble spore protein H family LRS65_08195 PF03466 LysR substrate binding domain LRS65_08195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRS65_08200 PF08402 TOBE domain LRS65_08200 PF00005 ABC transporter LRS65_08210 PF00528 Binding-protein-dependent transport system inner membrane component LRS65_08215 PF00753 Metallo-beta-lactamase superfamily LRS65_08215 PF12706 Beta-lactamase superfamily domain LRS65_08225 PF10787 Uncharacterised protein from bacillus cereus group LRS65_08250 PF00300 Histidine phosphatase superfamily (branch 1) LRS65_08260 PF00561 alpha/beta hydrolase fold LRS65_08270 PF01047 MarR family LRS65_08280 PF13537 Glutamine amidotransferase domain LRS65_08280 PF00733 Asparagine synthase LRS65_08300 PF16916 Dimerisation domain of Zinc Transporter LRS65_08300 PF01545 Cation efflux family LRS65_08310 PF07729 FCD domain LRS65_08310 PF00392 Bacterial regulatory proteins, gntR family LRS65_08315 PF00892 EamA-like transporter family LRS65_08325 PF07683 Cobalamin synthesis protein cobW C-terminal domain LRS65_08325 PF02492 CobW/HypB/UreG, nucleotide-binding domain LRS65_08330 PF03773 Predicted permease LRS65_08345 PF03553 Na+/H+ antiporter family LRS65_08350 PF13411 MerR HTH family regulatory protein LRS65_08360 PF00206 Lyase LRS65_08360 PF10415 Fumarase C C-terminus LRS65_08380 PF01554 MatE LRS65_08385 PF03575 Peptidase family S51 LRS65_08405 PF02683 Cytochrome C biogenesis protein transmembrane region LRS65_08410 PF00578 AhpC/TSA family LRS65_08425 PF00291 Pyridoxal-phosphate dependent enzyme LRS65_08430 PF04286 Protein of unknown function (DUF445) LRS65_08455 PF00196 Bacterial regulatory proteins, luxR family LRS65_08455 PF00072 Response regulator receiver domain LRS65_08460 PF13185 GAF domain LRS65_08460 PF13492 GAF domain LRS65_08460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_08460 PF07730 Histidine kinase LRS65_08465 PF00005 ABC transporter LRS65_08485 PF13091 PLD-like domain LRS65_08490 PF00696 Amino acid kinase family LRS65_08495 PF00375 Sodium:dicarboxylate symporter family LRS65_08500 PF10415 Fumarase C C-terminus LRS65_08500 PF00206 Lyase LRS65_08505 PF00390 Malic enzyme, N-terminal domain LRS65_08505 PF03949 Malic enzyme, NAD binding domain LRS65_08510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_08515 PF00072 Response regulator receiver domain LRS65_08515 PF08664 YcbB domain LRS65_08520 PF00271 Helicase conserved C-terminal domain LRS65_08520 PF00176 SNF2 family N-terminal domain LRS65_08520 PF04434 SWIM zinc finger LRS65_08530 PF03590 Aspartate-ammonia ligase LRS65_08540 PF00696 Amino acid kinase family LRS65_08540 PF13840 ACT domain LRS65_08555 PF14158 YndJ-like protein LRS65_08560 PF00293 NUDIX domain LRS65_08560 PF09297 NADH pyrophosphatase zinc ribbon domain LRS65_08565 PF07690 Major Facilitator Superfamily LRS65_08575 PF03976 Polyphosphate kinase 2 (PPK2) LRS65_08580 PF10400 Virulence activator alpha C-term LRS65_08580 PF03551 Transcriptional regulator PadR-like family LRS65_08585 PF07690 Major Facilitator Superfamily LRS65_08590 PF07690 Major Facilitator Superfamily LRS65_08605 PF01926 50S ribosome-binding GTPase LRS65_08605 PF13167 GTP-binding GTPase N-terminal LRS65_08605 PF16360 GTP-binding GTPase Middle Region LRS65_08610 PF07690 Major Facilitator Superfamily LRS65_08615 PF00291 Pyridoxal-phosphate dependent enzyme LRS65_08635 PF00209 Sodium:neurotransmitter symporter family LRS65_08640 PF01522 Polysaccharide deacetylase LRS65_08640 PF00457 Glycosyl hydrolases family 11 LRS65_08640 PF03422 Carbohydrate binding module (family 6) LRS65_08650 PF04239 Protein of unknown function (DUF421) LRS65_08670 PF01625 Peptide methionine sulfoxide reductase LRS65_08680 PF01063 Amino-transferase class IV LRS65_08685 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LRS65_08685 PF00205 Thiamine pyrophosphate enzyme, central domain LRS65_08685 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LRS65_08695 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LRS65_08695 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LRS65_08700 PF00920 Dehydratase family LRS65_08705 PF00291 Pyridoxal-phosphate dependent enzyme LRS65_08705 PF00585 C-terminal regulatory domain of Threonine dehydratase LRS65_08715 PF09587 Bacterial capsule synthesis protein PGA_cap LRS65_08730 PF07690 Major Facilitator Superfamily LRS65_08735 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LRS65_08745 PF04397 LytTr DNA-binding domain LRS65_08745 PF00072 Response regulator receiver domain LRS65_08750 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain LRS65_08750 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain LRS65_08765 PF01979 Amidohydrolase family LRS65_08770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LRS65_08775 PF13302 Acetyltransferase (GNAT) domain LRS65_08780 PF00072 Response regulator receiver domain LRS65_08780 PF00486 Transcriptional regulatory protein, C terminal LRS65_08785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_08785 PF00512 His Kinase A (phospho-acceptor) domain LRS65_08795 PF01566 Natural resistance-associated macrophage protein LRS65_08800 PF12368 Rhodanase C-terminal LRS65_08800 PF00581 Rhodanese-like domain LRS65_08800 PF17773 UPF0176 acylphosphatase like domain LRS65_08810 PF02558 Ketopantoate reductase PanE/ApbA LRS65_08810 PF08546 Ketopantoate reductase PanE/ApbA C terminal LRS65_08815 PF13520 Amino acid permease LRS65_08825 PF05791 Bacillus haemolytic enterotoxin (HBL) LRS65_08830 PF05791 Bacillus haemolytic enterotoxin (HBL) LRS65_08840 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase LRS65_08840 PF13088 BNR repeat-like domain LRS65_08840 PF00754 F5/8 type C domain LRS65_08845 PF02073 Thermophilic metalloprotease (M29) LRS65_08860 PF00583 Acetyltransferase (GNAT) family LRS65_08865 PF01906 Putative heavy-metal-binding LRS65_08875 PF00440 Bacterial regulatory proteins, tetR family LRS65_08880 PF04198 Putative sugar-binding domain LRS65_08885 PF01791 DeoC/LacD family aldolase LRS65_08890 PF01773 Na+ dependent nucleoside transporter N-terminus LRS65_08890 PF07662 Na+ dependent nucleoside transporter C-terminus LRS65_08895 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain LRS65_08895 PF00591 Glycosyl transferase family, a/b domain LRS65_08895 PF02885 Glycosyl transferase family, helical bundle domain LRS65_08900 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LRS65_08905 PF07301 Protein of unknown function (DUF1453) LRS65_08910 PF05979 Bacterial protein of unknown function (DUF896) LRS65_08925 PF03466 LysR substrate binding domain LRS65_08925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRS65_08940 PF05195 Aminopeptidase P, N-terminal domain LRS65_08940 PF00557 Metallopeptidase family M24 LRS65_08950 PF07732 Multicopper oxidase LRS65_08950 PF07731 Multicopper oxidase LRS65_08950 PF00394 Multicopper oxidase LRS65_08960 PF01131 DNA topoisomerase LRS65_08960 PF01396 Topoisomerase DNA binding C4 zinc finger LRS65_08960 PF13342 C-terminal repeat of topoisomerase LRS65_08960 PF01751 Toprim domain LRS65_08975 PF02525 Flavodoxin-like fold LRS65_08980 PF05525 Branched-chain amino acid transport protein LRS65_08990 PF04234 CopC domain LRS65_08990 PF05425 Copper resistance protein D LRS65_08990 PF13115 YtkA-like LRS65_08995 PF07987 Domain of unkown function (DUF1775) LRS65_09000 PF00892 EamA-like transporter family LRS65_09005 PF03466 LysR substrate binding domain LRS65_09005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRS65_09010 PF02082 Transcriptional regulator LRS65_09015 PF01323 DSBA-like thioredoxin domain LRS65_09020 PF00881 Nitroreductase family LRS65_09025 PF01425 Amidase LRS65_09030 PF01594 AI-2E family transporter LRS65_09035 PF00056 lactate/malate dehydrogenase, NAD binding domain LRS65_09035 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LRS65_09040 PF01593 Flavin containing amine oxidoreductase LRS65_09045 PF02492 CobW/HypB/UreG, nucleotide-binding domain LRS65_09045 PF07683 Cobalamin synthesis protein cobW C-terminal domain LRS65_09055 PF12399 Branched-chain amino acid ATP-binding cassette transporter LRS65_09055 PF00005 ABC transporter LRS65_09060 PF00005 ABC transporter LRS65_09065 PF02653 Branched-chain amino acid transport system / permease component LRS65_09075 PF03466 LysR substrate binding domain LRS65_09075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRS65_09085 PF14552 Tautomerase enzyme LRS65_09095 PF01047 MarR family LRS65_09105 PF01654 Cytochrome bd terminal oxidase subunit I LRS65_09110 PF02322 Cytochrome bd terminal oxidase subunit II LRS65_09115 PF00664 ABC transporter transmembrane region LRS65_09115 PF00005 ABC transporter LRS65_09120 PF00005 ABC transporter LRS65_09120 PF00664 ABC transporter transmembrane region LRS65_09130 PF00535 Glycosyl transferase family 2 LRS65_09135 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LRS65_09140 PF00132 Bacterial transferase hexapeptide (six repeats) LRS65_09165 PF17676 LD-carboxypeptidase C-terminal domain LRS65_09165 PF02016 LD-carboxypeptidase N-terminal domain LRS65_09170 PF07943 Penicillin-binding protein 5, C-terminal domain LRS65_09170 PF00768 D-alanyl-D-alanine carboxypeptidase LRS65_09185 PF01476 LysM domain LRS65_09185 PF00877 NlpC/P60 family LRS65_09195 PF00005 ABC transporter LRS65_09195 PF00664 ABC transporter transmembrane region LRS65_09200 PF00486 Transcriptional regulatory protein, C terminal LRS65_09200 PF00072 Response regulator receiver domain LRS65_09205 PF00989 PAS fold LRS65_09205 PF00512 His Kinase A (phospho-acceptor) domain LRS65_09205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_09205 PF16736 Single Cache-like LRS65_09215 PF00106 short chain dehydrogenase LRS65_09220 PF04439 Streptomycin adenylyltransferase LRS65_09225 PF01522 Polysaccharide deacetylase LRS65_09245 PF01842 ACT domain LRS65_09245 PF03447 Homoserine dehydrogenase, NAD binding domain LRS65_09245 PF00742 Homoserine dehydrogenase LRS65_09250 PF00291 Pyridoxal-phosphate dependent enzyme LRS65_09255 PF08544 GHMP kinases C terminal LRS65_09255 PF00288 GHMP kinases N terminal domain LRS65_09270 PF03816 Cell envelope-related transcriptional attenuator domain LRS65_09280 PF00072 Response regulator receiver domain LRS65_09280 PF00486 Transcriptional regulatory protein, C terminal LRS65_09285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_09285 PF00512 His Kinase A (phospho-acceptor) domain LRS65_09285 PF00989 PAS fold LRS65_09285 PF16736 Single Cache-like LRS65_09290 PF01522 Polysaccharide deacetylase LRS65_09300 PF02308 MgtC family LRS65_09305 PF00583 Acetyltransferase (GNAT) family LRS65_09310 PF07282 Putative transposase DNA-binding domain LRS65_09310 PF12323 Helix-turn-helix domain LRS65_09310 PF01385 Probable transposase LRS65_09315 PF04183 IucA / IucC family LRS65_09315 PF06276 Ferric iron reductase FhuF-like transporter LRS65_09320 PF06276 Ferric iron reductase FhuF-like transporter LRS65_09320 PF04183 IucA / IucC family LRS65_09325 PF00501 AMP-binding enzyme LRS65_09325 PF13193 AMP-binding enzyme C-terminal domain LRS65_09340 PF01261 Xylose isomerase-like TIM barrel LRS65_09345 PF00269 Small, acid-soluble spore proteins, alpha/beta type LRS65_09350 PF07690 Major Facilitator Superfamily LRS65_09355 PF01810 LysE type translocator LRS65_09360 PF00155 Aminotransferase class I and II LRS65_09360 PF00392 Bacterial regulatory proteins, gntR family LRS65_09370 PF01734 Patatin-like phospholipase LRS65_09395 PF00293 NUDIX domain LRS65_09395 PF13344 Haloacid dehalogenase-like hydrolase LRS65_09400 PF02540 NAD synthase LRS65_09405 PF02687 FtsX-like permease family LRS65_09410 PF18277 AbrB C-terminal domain LRS65_09410 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LRS65_09415 PF00082 Subtilase family LRS65_09425 PF05656 Protein of unknown function (DUF805) LRS65_09445 PF03193 RsgA GTPase LRS65_09450 PF02743 Cache domain LRS65_09450 PF00672 HAMP domain LRS65_09450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LRS65_09470 PF00210 Ferritin-like domain LRS65_09485 PF00296 Luciferase-like monooxygenase LRS65_09495 PF01593 Flavin containing amine oxidoreductase LRS65_09500 PF13302 Acetyltransferase (GNAT) domain LRS65_09505 PF00248 Aldo/keto reductase family LRS65_09510 PF07683 Cobalamin synthesis protein cobW C-terminal domain LRS65_09510 PF02492 CobW/HypB/UreG, nucleotide-binding domain LRS65_09515 PF00583 Acetyltransferase (GNAT) family LRS65_09520 PF01297 Zinc-uptake complex component A periplasmic LRS65_09530 PF13460 NAD(P)H-binding LRS65_09535 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LRS65_09540 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LRS65_09540 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LRS65_09550 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LRS65_09555 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LRS65_09565 PF00300 Histidine phosphatase superfamily (branch 1) LRS65_09575 PF08757 CotH kinase protein LRS65_09580 PF00293 NUDIX domain LRS65_09585 PF09335 SNARE associated Golgi protein LRS65_09590 PF14667 Polysaccharide biosynthesis C-terminal domain LRS65_09590 PF01943 Polysaccharide biosynthesis protein LRS65_09600 PF03773 Predicted permease LRS65_09605 PF09323 Domain of unknown function (DUF1980) LRS65_09610 PF03061 Thioesterase superfamily LRS65_09620 PF13396 Phospholipase_D-nuclease N-terminal LRS65_09620 PF13091 PLD-like domain LRS65_09635 PF13460 NAD(P)H-binding LRS65_09640 PF04306 Protein of unknown function (DUF456) LRS65_09645 PF00571 CBS domain LRS65_09645 PF01595 Cyclin M transmembrane N-terminal domain LRS65_09645 PF03471 Transporter associated domain LRS65_09665 PF05525 Branched-chain amino acid transport protein LRS65_09670 PF01588 Putative tRNA binding domain LRS65_09690 PF07454 Stage II sporulation protein P (SpoIIP) LRS65_09695 PF00583 Acetyltransferase (GNAT) family LRS65_09700 PF02557 D-alanyl-D-alanine carboxypeptidase LRS65_09710 PF01425 Amidase LRS65_09715 PF07690 Major Facilitator Superfamily LRS65_09725 PF01145 SPFH domain / Band 7 family LRS65_09730 PF07454 Stage II sporulation protein P (SpoIIP) LRS65_09755 PF00842 Alanine racemase, C-terminal domain LRS65_09755 PF01168 Alanine racemase, N-terminal domain LRS65_09775 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase LRS65_09780 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LRS65_09780 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LRS65_09815 PF00583 Acetyltransferase (GNAT) family LRS65_09830 PF06013 Proteins of 100 residues with WXG LRS65_09845 PF08817 WXG100 protein secretion system (Wss), protein YukD LRS65_09850 PF10140 WXG100 protein secretion system (Wss), protein YukC LRS65_09855 PF01580 FtsK/SpoIIIE family LRS65_09855 PF12538 DNA transporter LRS65_09940 PF09579 Sporulation protein YtfJ (Spore_YtfJ) LRS65_09965 PF01209 ubiE/COQ5 methyltransferase family LRS65_09970 PF01268 Formate--tetrahydrofolate ligase LRS65_09980 PF00271 Helicase conserved C-terminal domain LRS65_09980 PF00270 DEAD/DEAH box helicase LRS65_09985 PF01261 Xylose isomerase-like TIM barrel LRS65_09990 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LRS65_10000 PF08240 Alcohol dehydrogenase GroES-like domain LRS65_10000 PF00107 Zinc-binding dehydrogenase LRS65_10005 PF04542 Sigma-70 region 2 LRS65_10005 PF08281 Sigma-70, region 4 LRS65_10020 PF01613 Flavin reductase like domain LRS65_10020 PF00258 Flavodoxin LRS65_10030 PF00255 Glutathione peroxidase LRS65_10035 PF11992 Domain of unknown function (DUF3488) LRS65_10035 PF13559 Domain of unknown function (DUF4129) LRS65_10035 PF01841 Transglutaminase-like superfamily LRS65_10040 PF01882 Protein of unknown function DUF58 LRS65_10045 PF07726 ATPase family associated with various cellular activities (AAA) LRS65_10045 PF17863 AAA lid domain LRS65_10050 PF01568 Molydopterin dinucleotide binding domain LRS65_10050 PF00384 Molybdopterin oxidoreductase LRS65_10050 PF14710 Respiratory nitrate reductase alpha N-terminal LRS65_10055 PF13247 4Fe-4S dicluster domain LRS65_10055 PF14711 Respiratory nitrate reductase beta C-terminal LRS65_10060 PF02613 Nitrate reductase delta subunit LRS65_10065 PF02665 Nitrate reductase gamma subunit LRS65_10070 PF00027 Cyclic nucleotide-binding domain LRS65_10070 PF00325 Bacterial regulatory proteins, crp family LRS65_10075 PF06463 Molybdenum Cofactor Synthesis C LRS65_10075 PF04055 Radical SAM superfamily LRS65_10080 PF00899 ThiF family LRS65_10085 PF03454 MoeA C-terminal region (domain IV) LRS65_10085 PF00994 Probable molybdopterin binding domain LRS65_10085 PF03453 MoeA N-terminal region (domain I and II) LRS65_10090 PF02391 MoaE protein LRS65_10100 PF07690 Major Facilitator Superfamily LRS65_10125 PF01903 CbiX LRS65_10130 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LRS65_10135 PF00355 Rieske [2Fe-2S] domain LRS65_10140 PF04324 BFD-like [2Fe-2S] binding domain LRS65_10140 PF18267 Rubredoxin NAD+ reductase C-terminal domain LRS65_10140 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRS65_10140 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LRS65_10140 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LRS65_10145 PF04405 Domain of Unknown function (DUF542) LRS65_10145 PF01814 Hemerythrin HHE cation binding domain LRS65_10180 PF04232 Stage V sporulation protein S (SpoVS) LRS65_10185 PF14659 Phage integrase, N-terminal SAM-like domain LRS65_10185 PF00589 Phage integrase family LRS65_10190 PF06114 IrrE N-terminal-like domain LRS65_10210 PF01381 Helix-turn-helix LRS65_10290 PF00589 Phage integrase family LRS65_10320 PF02796 Helix-turn-helix domain of resolvase LRS65_10320 PF00239 Resolvase, N terminal domain LRS65_10330 PF10668 Phage terminase small subunit LRS65_10335 PF04466 Phage terminase large subunit LRS65_10335 PF17288 Terminase RNAseH like domain LRS65_10350 PF14550 Putative phage serine protease XkdF LRS65_10355 PF05065 Phage capsid family LRS65_10475 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LRS65_10475 PF13457 GW (Gly-Tryp) dipeptide domain LRS65_10485 PF18801 response regulator aspartate phosphatase H, N terminal LRS65_10520 PF01966 HD domain LRS65_10525 PF16326 ABC transporter C-terminal domain LRS65_10525 PF12848 ABC transporter LRS65_10525 PF00005 ABC transporter LRS65_10540 PF00436 Single-strand binding protein family LRS65_10545 PF08712 Scaffold protein Nfu/NifU N terminal LRS65_10545 PF13769 Virulence factor LRS65_10555 PF06491 Disulphide isomerase LRS65_10560 PF04445 Putative SAM-dependent methyltransferase LRS65_10565 PF00750 tRNA synthetases class I (R) LRS65_10565 PF03485 Arginyl tRNA synthetase N terminal domain LRS65_10565 PF05746 DALR anticodon binding domain LRS65_10590 PF00133 tRNA synthetases class I (I, L, M and V) LRS65_10590 PF08264 Anticodon-binding domain of tRNA LRS65_10615 PF00152 tRNA synthetases class II (D, K and N) LRS65_10615 PF01336 OB-fold nucleic acid binding domain LRS65_10620 PF00209 Sodium:neurotransmitter symporter family LRS65_10635 PF10997 Alternate to MurJ LRS65_10640 PF13419 Haloacid dehalogenase-like hydrolase LRS65_10650 PF00465 Iron-containing alcohol dehydrogenase LRS65_10655 PF01177 Asp/Glu/Hydantoin racemase LRS65_10660 PF01980 tRNA-methyltransferase O LRS65_10665 PF00583 Acetyltransferase (GNAT) family LRS65_10670 PF11188 Protein of unknown function (DUF2975) LRS65_10675 PF13443 Cro/C1-type HTH DNA-binding domain LRS65_10680 PF08645 Polynucleotide kinase 3 phosphatase LRS65_10690 PF00005 ABC transporter LRS65_10695 PF05975 Bacterial ABC transporter protein EcsB LRS65_10700 PF14005 YpjP-like protein LRS65_10705 PF13419 Haloacid dehalogenase-like hydrolase LRS65_10720 PF00144 Beta-lactamase LRS65_10720 PF07930 D-aminopeptidase, domain B LRS65_10725 PF00303 Thymidylate synthase LRS65_10730 PF00186 Dihydrofolate reductase LRS65_10735 PF05223 NTF2-like N-terminal transpeptidase domain LRS65_10735 PF00905 Penicillin binding protein transpeptidase domain LRS65_10735 PF03717 Penicillin-binding Protein dimerisation domain LRS65_10740 PF02525 Flavodoxin-like fold LRS65_10745 PF01553 Acyltransferase LRS65_10750 PF03006 Haemolysin-III related LRS65_10755 PF02416 mttA/Hcf106 family LRS65_10760 PF00902 Sec-independent protein translocase protein (TatC) LRS65_10770 PF02645 Uncharacterised protein, DegV family COG1307 LRS65_10780 PF02630 SCO1/SenC LRS65_10785 PF00011 Hsp20/alpha crystallin family LRS65_10790 PF13537 Glutamine amidotransferase domain LRS65_10790 PF00733 Asparagine synthase LRS65_10805 PF05036 Sporulation related domain LRS65_10805 PF01520 N-acetylmuramoyl-L-alanine amidase LRS65_10810 PF01497 Periplasmic binding protein LRS65_10815 PF01063 Amino-transferase class IV LRS65_10820 PF00881 Nitroreductase family LRS65_10830 PF00857 Isochorismatase family LRS65_10840 PF00011 Hsp20/alpha crystallin family LRS65_10845 PF00924 Mechanosensitive ion channel LRS65_10850 PF07730 Histidine kinase LRS65_10850 PF13185 GAF domain LRS65_10855 PF00196 Bacterial regulatory proteins, luxR family LRS65_10855 PF00072 Response regulator receiver domain LRS65_10860 PF01418 Helix-turn-helix domain, rpiR family LRS65_10860 PF01380 SIS domain LRS65_10865 PF02567 Phenazine biosynthesis-like protein LRS65_10870 PF00107 Zinc-binding dehydrogenase LRS65_10870 PF08240 Alcohol dehydrogenase GroES-like domain LRS65_10885 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LRS65_10885 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LRS65_10890 PF02447 GntP family permease LRS65_10895 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LRS65_10895 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LRS65_10915 PF03358 NADPH-dependent FMN reductase LRS65_10930 PF00571 CBS domain LRS65_10930 PF00005 ABC transporter LRS65_10935 PF00528 Binding-protein-dependent transport system inner membrane component LRS65_10940 PF13520 Amino acid permease LRS65_10970 PF00571 CBS domain LRS65_10970 PF03471 Transporter associated domain LRS65_10970 PF01595 Cyclin M transmembrane N-terminal domain LRS65_10975 PF00171 Aldehyde dehydrogenase family LRS65_10980 PF07997 Protein of unknown function (DUF1694) LRS65_10985 PF09385 Histidine kinase N terminal LRS65_10995 PF00202 Aminotransferase class-III LRS65_11000 PF01144 Coenzyme A transferase LRS65_11005 PF01144 Coenzyme A transferase LRS65_11010 PF07687 Peptidase dimerisation domain LRS65_11010 PF01546 Peptidase family M20/M25/M40 LRS65_11015 PF00583 Acetyltransferase (GNAT) family LRS65_11020 PF00158 Sigma-54 interaction domain LRS65_11020 PF02954 Bacterial regulatory protein, Fis family LRS65_11020 PF13426 PAS domain LRS65_11025 PF12544 Lysine-2,3-aminomutase LRS65_11030 PF14122 YokU-like protein, putative antitoxin LRS65_11035 PF06855 YozE SAM-like fold LRS65_11050 PF14162 YozD-like protein LRS65_11060 PF08239 Bacterial SH3 domain LRS65_11060 PF00069 Protein kinase domain LRS65_11070 PF01569 PAP2 superfamily LRS65_11075 PF01545 Cation efflux family LRS65_11075 PF16916 Dimerisation domain of Zinc Transporter LRS65_11080 PF00085 Thioredoxin LRS65_11150 PF10676 Spore germination protein gerPA/gerPF LRS65_11165 PF00106 short chain dehydrogenase LRS65_11185 PF00905 Penicillin binding protein transpeptidase domain LRS65_11185 PF00912 Transglycosylase LRS65_11195 PF07690 Major Facilitator Superfamily LRS65_11200 PF01521 Iron-sulphur cluster biosynthesis LRS65_11205 PF00285 Citrate synthase, C-terminal domain LRS65_11210 PF03972 MmgE/PrpD family LRS65_11220 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LRS65_11220 PF02770 Acyl-CoA dehydrogenase, middle domain LRS65_11220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRS65_11225 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LRS65_11225 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LRS65_11230 PF00171 Aldehyde dehydrogenase family LRS65_11235 PF01810 LysE type translocator LRS65_11240 PF00378 Enoyl-CoA hydratase/isomerase LRS65_11255 PF00149 Calcineurin-like phosphoesterase LRS65_11255 PF12320 Type 5 capsule protein repressor C-terminal domain LRS65_11260 PF13476 AAA domain LRS65_11270 PF01022 Bacterial regulatory protein, arsR family LRS65_11285 PF07690 Major Facilitator Superfamily LRS65_11290 PF00106 short chain dehydrogenase LRS65_11295 PF00425 chorismate binding enzyme LRS65_11300 PF13193 AMP-binding enzyme C-terminal domain LRS65_11300 PF00501 AMP-binding enzyme LRS65_11305 PF00550 Phosphopantetheine attachment site LRS65_11305 PF00857 Isochorismatase family LRS65_11310 PF00550 Phosphopantetheine attachment site LRS65_11310 PF13193 AMP-binding enzyme C-terminal domain LRS65_11310 PF00668 Condensation domain LRS65_11310 PF00975 Thioesterase domain LRS65_11310 PF00501 AMP-binding enzyme LRS65_11315 PF03621 MbtH-like protein LRS65_11320 PF07690 Major Facilitator Superfamily LRS65_11335 PF00216 Bacterial DNA-binding protein LRS65_11345 PF05163 DinB family LRS65_11350 PF00082 Subtilase family LRS65_11355 PF01235 Sodium:alanine symporter family LRS65_11375 PF01479 S4 domain LRS65_11375 PF00849 RNA pseudouridylate synthase LRS65_11380 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LRS65_11380 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LRS65_11380 PF03129 Anticodon binding domain LRS65_11380 PF02824 TGS domain LRS65_11385 PF00005 ABC transporter LRS65_11410 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LRS65_11410 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LRS65_11410 PF00205 Thiamine pyrophosphate enzyme, central domain LRS65_11420 PF00753 Metallo-beta-lactamase superfamily LRS65_11430 PF01156 Inosine-uridine preferring nucleoside hydrolase LRS65_11450 PF00027 Cyclic nucleotide-binding domain LRS65_11460 PF00561 alpha/beta hydrolase fold LRS65_11470 PF00753 Metallo-beta-lactamase superfamily LRS65_11470 PF16123 Hydroxyacylglutathione hydrolase C-terminus LRS65_11480 PF03176 MMPL family LRS65_11490 PF00302 Chloramphenicol acetyltransferase LRS65_11505 PF00583 Acetyltransferase (GNAT) family LRS65_11530 PF01593 Flavin containing amine oxidoreductase LRS65_11540 PF13302 Acetyltransferase (GNAT) domain LRS65_11550 PF00313 'Cold-shock' DNA-binding domain LRS65_11570 PF03466 LysR substrate binding domain LRS65_11570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRS65_11575 PF02774 Semialdehyde dehydrogenase, dimerisation domain LRS65_11575 PF01118 Semialdehyde dehydrogenase, NAD binding domain LRS65_11595 PF03466 LysR substrate binding domain LRS65_11595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRS65_11600 PF03473 MOSC domain LRS65_11600 PF03475 3-alpha domain LRS65_11615 PF00005 ABC transporter LRS65_11615 PF00664 ABC transporter transmembrane region LRS65_11620 PF00005 ABC transporter LRS65_11620 PF00664 ABC transporter transmembrane region LRS65_11645 PF01810 LysE type translocator LRS65_11650 PF01381 Helix-turn-helix LRS65_11650 PF07883 Cupin domain LRS65_11685 PF12680 SnoaL-like domain LRS65_11685 PF04542 Sigma-70 region 2 LRS65_11685 PF08281 Sigma-70, region 4 LRS65_11715 PF02638 Glycosyl hydrolase-like 10 LRS65_11725 PF02378 Phosphotransferase system, EIIC LRS65_11735 PF03702 Anhydro-N-acetylmuramic acid kinase LRS65_11740 PF01869 BadF/BadG/BcrA/BcrD ATPase family LRS65_11745 PF02660 Glycerol-3-phosphate acyltransferase LRS65_11750 PF00266 Aminotransferase class-V LRS65_11755 PF00291 Pyridoxal-phosphate dependent enzyme LRS65_11760 PF01047 MarR family LRS65_11765 PF07690 Major Facilitator Superfamily LRS65_11775 PF00753 Metallo-beta-lactamase superfamily LRS65_11775 PF16123 Hydroxyacylglutathione hydrolase C-terminus LRS65_11785 PF00271 Helicase conserved C-terminal domain LRS65_11785 PF00270 DEAD/DEAH box helicase LRS65_11795 PF00440 Bacterial regulatory proteins, tetR family LRS65_11795 PF17932 Tetracyclin repressor-like, C-terminal domain LRS65_11815 PF03848 Tellurite resistance protein TehB LRS65_11815 PF09313 Domain of unknown function (DUF1971) LRS65_11825 PF08241 Methyltransferase domain LRS65_11835 PF01047 MarR family LRS65_11840 PF00300 Histidine phosphatase superfamily (branch 1) LRS65_11845 PF14171 Toxin SpoIISA, type II toxin-antitoxin system LRS65_11865 PF01546 Peptidase family M20/M25/M40 LRS65_11865 PF07687 Peptidase dimerisation domain LRS65_11880 PF00196 Bacterial regulatory proteins, luxR family LRS65_11880 PF00072 Response regulator receiver domain LRS65_11890 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LRS65_11890 PF18277 AbrB C-terminal domain LRS65_11900 PF01925 Sulfite exporter TauE/SafE LRS65_11905 PF00132 Bacterial transferase hexapeptide (six repeats) LRS65_11910 PF07943 Penicillin-binding protein 5, C-terminal domain LRS65_11910 PF00768 D-alanyl-D-alanine carboxypeptidase LRS65_11925 PF07690 Major Facilitator Superfamily LRS65_11930 PF13193 AMP-binding enzyme C-terminal domain LRS65_11930 PF00668 Condensation domain LRS65_11930 PF00550 Phosphopantetheine attachment site LRS65_11930 PF00501 AMP-binding enzyme LRS65_11935 PF00550 Phosphopantetheine attachment site LRS65_11935 PF00501 AMP-binding enzyme LRS65_11935 PF13193 AMP-binding enzyme C-terminal domain LRS65_11935 PF07993 Male sterility protein LRS65_11935 PF00668 Condensation domain LRS65_11940 PF00501 AMP-binding enzyme LRS65_11940 PF00668 Condensation domain LRS65_11940 PF00550 Phosphopantetheine attachment site LRS65_11940 PF13193 AMP-binding enzyme C-terminal domain LRS65_11945 PF01648 4'-phosphopantetheinyl transferase superfamily LRS65_11950 PF00975 Thioesterase domain LRS65_11960 PF05139 Erythromycin esterase LRS65_11975 PF13302 Acetyltransferase (GNAT) domain LRS65_11985 PF01520 N-acetylmuramoyl-L-alanine amidase LRS65_11985 PF00395 S-layer homology domain LRS65_12015 PF00144 Beta-lactamase LRS65_12015 PF11954 Domain of unknown function (DUF3471) LRS65_12020 PF05223 NTF2-like N-terminal transpeptidase domain LRS65_12020 PF03717 Penicillin-binding Protein dimerisation domain LRS65_12020 PF00905 Penicillin binding protein transpeptidase domain LRS65_12025 PF04542 Sigma-70 region 2 LRS65_12025 PF08281 Sigma-70, region 4 LRS65_12035 PF00905 Penicillin binding protein transpeptidase domain LRS65_12035 PF03717 Penicillin-binding Protein dimerisation domain LRS65_12040 PF03717 Penicillin-binding Protein dimerisation domain LRS65_12040 PF00905 Penicillin binding protein transpeptidase domain LRS65_12050 PF13302 Acetyltransferase (GNAT) domain LRS65_12060 PF00149 Calcineurin-like phosphoesterase LRS65_12070 PF00005 ABC transporter LRS65_12080 PF00440 Bacterial regulatory proteins, tetR family LRS65_12080 PF08359 YsiA-like protein, C-terminal region LRS65_12095 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRS65_12095 PF02770 Acyl-CoA dehydrogenase, middle domain LRS65_12095 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LRS65_12100 PF00289 Biotin carboxylase, N-terminal domain LRS65_12100 PF02785 Biotin carboxylase C-terminal domain LRS65_12100 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LRS65_12105 PF00364 Biotin-requiring enzyme LRS65_12110 PF00682 HMGL-like LRS65_12115 PF00378 Enoyl-CoA hydratase/isomerase LRS65_12120 PF01039 Carboxyl transferase domain LRS65_12125 PF16177 Acetyl-coenzyme A synthetase N-terminus LRS65_12125 PF00501 AMP-binding enzyme LRS65_12125 PF13193 AMP-binding enzyme C-terminal domain LRS65_12145 PF00485 Phosphoribulokinase / Uridine kinase family LRS65_12165 PF00768 D-alanyl-D-alanine carboxypeptidase LRS65_12165 PF07943 Penicillin-binding protein 5, C-terminal domain LRS65_12170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_12170 PF00512 His Kinase A (phospho-acceptor) domain LRS65_12175 PF00486 Transcriptional regulatory protein, C terminal LRS65_12175 PF00072 Response regulator receiver domain LRS65_12180 PF01966 HD domain LRS65_12190 PF01048 Phosphorylase superfamily LRS65_12205 PF07504 Fungalysin/Thermolysin Propeptide Motif LRS65_12205 PF03413 Peptidase propeptide and YPEB domain LRS65_12205 PF02868 Thermolysin metallopeptidase, alpha-helical domain LRS65_12205 PF01447 Thermolysin metallopeptidase, catalytic domain LRS65_12210 PF12833 Helix-turn-helix domain LRS65_12210 PF17853 GGDEF-like domain LRS65_12240 PF17760 UvrA interaction domain LRS65_12240 PF17755 UvrA DNA-binding domain LRS65_12240 PF00005 ABC transporter LRS65_12245 PF09278 MerR, DNA binding LRS65_12245 PF00376 MerR family regulatory protein LRS65_12255 PF01638 HxlR-like helix-turn-helix LRS65_12280 PF01636 Phosphotransferase enzyme family LRS65_12285 PF12833 Helix-turn-helix domain LRS65_12300 PF00392 Bacterial regulatory proteins, gntR family LRS65_12300 PF00155 Aminotransferase class I and II LRS65_12310 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal LRS65_12310 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal LRS65_12325 PF00107 Zinc-binding dehydrogenase LRS65_12325 PF08240 Alcohol dehydrogenase GroES-like domain LRS65_12335 PF04239 Protein of unknown function (DUF421) LRS65_12350 PF08450 SMP-30/Gluconolactonase/LRE-like region LRS65_12360 PF01921 tRNA synthetases class I (K) LRS65_12365 PF07486 Cell Wall Hydrolase LRS65_12370 PF00561 alpha/beta hydrolase fold LRS65_12380 PF00486 Transcriptional regulatory protein, C terminal LRS65_12380 PF00072 Response regulator receiver domain LRS65_12385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_12405 PF00005 ABC transporter LRS65_12410 PF02687 FtsX-like permease family LRS65_12430 PF00742 Homoserine dehydrogenase LRS65_12430 PF01842 ACT domain LRS65_12430 PF03447 Homoserine dehydrogenase, NAD binding domain LRS65_12435 PF00155 Aminotransferase class I and II LRS65_12435 PF00392 Bacterial regulatory proteins, gntR family LRS65_12440 PF07478 D-ala D-ala ligase C-terminus LRS65_12440 PF01820 D-ala D-ala ligase N-terminus LRS65_12445 PF03070 TENA/THI-4/PQQC family LRS65_12505 PF00067 Cytochrome P450 LRS65_12515 PF00132 Bacterial transferase hexapeptide (six repeats) LRS65_12520 PF07561 Domain of Unknown Function (DUF1540) LRS65_12530 PF00067 Cytochrome P450 LRS65_12545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_12545 PF13426 PAS domain LRS65_12545 PF13188 PAS domain LRS65_12545 PF00512 His Kinase A (phospho-acceptor) domain LRS65_12545 PF00989 PAS fold LRS65_12550 PF03717 Penicillin-binding Protein dimerisation domain LRS65_12550 PF00905 Penicillin binding protein transpeptidase domain LRS65_12555 PF10502 Signal peptidase, peptidase S26 LRS65_12560 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase LRS65_12565 PF01177 Asp/Glu/Hydantoin racemase LRS65_12570 PF07155 ECF-type riboflavin transporter, S component LRS65_12575 PF12558 ATP-binding cassette cobalt transporter LRS65_12575 PF00005 ABC transporter LRS65_12590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_12590 PF00512 His Kinase A (phospho-acceptor) domain LRS65_12640 PF00293 NUDIX domain LRS65_12640 PF13344 Haloacid dehalogenase-like hydrolase LRS65_12665 PF08240 Alcohol dehydrogenase GroES-like domain LRS65_12665 PF00107 Zinc-binding dehydrogenase LRS65_12670 PF01569 PAP2 superfamily LRS65_12675 PF03793 PASTA domain LRS65_12675 PF03717 Penicillin-binding Protein dimerisation domain LRS65_12675 PF00905 Penicillin binding protein transpeptidase domain LRS65_12680 PF08361 MAATS-type transcriptional repressor, C-terminal region LRS65_12680 PF00440 Bacterial regulatory proteins, tetR family LRS65_12725 PF13411 MerR HTH family regulatory protein LRS65_12725 PF07739 TipAS antibiotic-recognition domain LRS65_12730 PF07690 Major Facilitator Superfamily LRS65_12745 PF03009 Glycerophosphoryl diester phosphodiesterase family LRS65_12765 PF00392 Bacterial regulatory proteins, gntR family LRS65_12765 PF00155 Aminotransferase class I and II LRS65_12770 PF00892 EamA-like transporter family LRS65_12775 PF01270 Glycosyl hydrolases family 8 LRS65_12780 PF01156 Inosine-uridine preferring nucleoside hydrolase LRS65_12795 PF13344 Haloacid dehalogenase-like hydrolase LRS65_12795 PF00293 NUDIX domain LRS65_12805 PF00144 Beta-lactamase LRS65_12815 PF07690 Major Facilitator Superfamily LRS65_12825 PF09297 NADH pyrophosphatase zinc ribbon domain LRS65_12825 PF00293 NUDIX domain LRS65_12830 PF00712 DNA polymerase III beta subunit, N-terminal domain LRS65_12830 PF02768 DNA polymerase III beta subunit, C-terminal domain LRS65_12830 PF02767 DNA polymerase III beta subunit, central domain LRS65_12855 PF01042 Endoribonuclease L-PSP LRS65_12860 PF09234 Domain of unknown function (DUF1963) LRS65_12865 PF00756 Putative esterase LRS65_12865 PF00404 Dockerin type I domain LRS65_12865 PF03422 Carbohydrate binding module (family 6) LRS65_12865 PF00331 Glycosyl hydrolase family 10 LRS65_12880 PF01734 Patatin-like phospholipase LRS65_12885 PF08000 Bacterial PH domain LRS65_12895 PF12867 DinB superfamily LRS65_12910 PF02673 Bacitracin resistance protein BacA LRS65_12920 PF01541 GIY-YIG catalytic domain LRS65_12960 PF01266 FAD dependent oxidoreductase LRS65_12990 PF00144 Beta-lactamase LRS65_12995 PF13419 Haloacid dehalogenase-like hydrolase LRS65_13000 PF00072 Response regulator receiver domain LRS65_13000 PF00486 Transcriptional regulatory protein, C terminal LRS65_13005 PF00512 His Kinase A (phospho-acceptor) domain LRS65_13005 PF00989 PAS fold LRS65_13005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_13005 PF16736 Single Cache-like LRS65_13020 PF00005 ABC transporter LRS65_13025 PF02687 FtsX-like permease family LRS65_13025 PF12704 MacB-like periplasmic core domain LRS65_13035 PF07859 alpha/beta hydrolase fold LRS65_13040 PF00282 Pyridoxal-dependent decarboxylase conserved domain LRS65_13045 PF00550 Phosphopantetheine attachment site LRS65_13045 PF00668 Condensation domain LRS65_13045 PF13193 AMP-binding enzyme C-terminal domain LRS65_13045 PF00501 AMP-binding enzyme LRS65_13055 PF00128 Alpha amylase, catalytic domain LRS65_13055 PF03714 Bacterial pullanase-associated domain LRS65_13055 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LRS65_13060 PF03413 Peptidase propeptide and YPEB domain LRS65_13060 PF01447 Thermolysin metallopeptidase, catalytic domain LRS65_13060 PF02868 Thermolysin metallopeptidase, alpha-helical domain LRS65_13060 PF07504 Fungalysin/Thermolysin Propeptide Motif LRS65_13065 PF02872 5'-nucleotidase, C-terminal domain LRS65_13065 PF00149 Calcineurin-like phosphoesterase LRS65_13080 PF00344 SecY translocase LRS65_13085 PF00892 EamA-like transporter family LRS65_13090 PF00392 Bacterial regulatory proteins, gntR family LRS65_13090 PF00155 Aminotransferase class I and II LRS65_13095 PF08240 Alcohol dehydrogenase GroES-like domain LRS65_13095 PF00107 Zinc-binding dehydrogenase LRS65_13100 PF00561 alpha/beta hydrolase fold LRS65_13125 PF06081 Aromatic acid exporter family member 1 LRS65_13140 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) LRS65_13145 PF14620 YpeB sporulation LRS65_13145 PF03413 Peptidase propeptide and YPEB domain LRS65_13150 PF01471 Putative peptidoglycan binding domain LRS65_13150 PF07486 Cell Wall Hydrolase LRS65_13170 PF03301 Tryptophan 2,3-dioxygenase LRS65_13175 PF04199 Putative cyclase LRS65_13180 PF00266 Aminotransferase class-V LRS65_13185 PF08359 YsiA-like protein, C-terminal region LRS65_13185 PF00440 Bacterial regulatory proteins, tetR family LRS65_13190 PF13344 Haloacid dehalogenase-like hydrolase LRS65_13190 PF00293 NUDIX domain LRS65_13205 PF00158 Sigma-54 interaction domain LRS65_13205 PF02954 Bacterial regulatory protein, Fis family LRS65_13205 PF01590 GAF domain LRS65_13215 PF13302 Acetyltransferase (GNAT) domain LRS65_13220 PF08220 DeoR-like helix-turn-helix domain LRS65_13220 PF00455 DeoR C terminal sensor domain LRS65_13235 PF02082 Transcriptional regulator LRS65_13250 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LRS65_13250 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRS65_13255 PF00364 Biotin-requiring enzyme LRS65_13255 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LRS65_13255 PF02817 e3 binding domain LRS65_13260 PF02779 Transketolase, pyrimidine binding domain LRS65_13260 PF02780 Transketolase, C-terminal domain LRS65_13265 PF00676 Dehydrogenase E1 component LRS65_13275 PF00106 short chain dehydrogenase LRS65_13280 PF13789 Domain of unknown function (DUF4181) LRS65_13305 PF00528 Binding-protein-dependent transport system inner membrane component LRS65_13310 PF00005 ABC transporter LRS65_13310 PF00571 CBS domain LRS65_13315 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LRS65_13320 PF00574 Clp protease LRS65_13335 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LRS65_13340 PF13673 Acetyltransferase (GNAT) domain LRS65_13345 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LRS65_13345 PF18416 N-acetylglucosamine binding protein domain 2 LRS65_13350 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase LRS65_13355 PF03781 Sulfatase-modifying factor enzyme 1 LRS65_13370 PF10990 Protein of unknown function (DUF2809) LRS65_13375 PF08241 Methyltransferase domain LRS65_13380 PF04237 YjbR LRS65_13425 PF13538 UvrD-like helicase C-terminal domain LRS65_13445 PF09382 RQC domain LRS65_13445 PF00270 DEAD/DEAH box helicase LRS65_13445 PF00271 Helicase conserved C-terminal domain LRS65_13445 PF00570 HRDC domain LRS65_13445 PF16124 RecQ zinc-binding LRS65_13475 PF01510 N-acetylmuramoyl-L-alanine amidase LRS65_13475 PF12123 N-acetylmuramoyl-l-alanine amidase LRS65_13495 PF02833 DHHA2 domain LRS65_13495 PF01368 DHH family LRS65_13500 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LRS65_13500 PF18416 N-acetylglucosamine binding protein domain 2 LRS65_13515 PF02627 Carboxymuconolactone decarboxylase family LRS65_13520 PF01235 Sodium:alanine symporter family LRS65_13525 PF00171 Aldehyde dehydrogenase family LRS65_13530 PF00701 Dihydrodipicolinate synthetase family LRS65_13535 PF05544 Proline racemase LRS65_13540 PF05544 Proline racemase LRS65_13545 PF01266 FAD dependent oxidoreductase LRS65_13550 PF00158 Sigma-54 interaction domain LRS65_13550 PF02954 Bacterial regulatory protein, Fis family LRS65_13550 PF13188 PAS domain LRS65_13565 PF04324 BFD-like [2Fe-2S] binding domain LRS65_13565 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRS65_13580 PF08876 Domain of unknown function (DUF1836) LRS65_13585 PF09335 SNARE associated Golgi protein LRS65_13595 PF04914 DltD protein LRS65_13605 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LRS65_13610 PF00877 NlpC/P60 family LRS65_13610 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain LRS65_13615 PF13378 Enolase C-terminal domain-like LRS65_13615 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LRS65_13630 PF00248 Aldo/keto reductase family LRS65_13635 PF01965 DJ-1/PfpI family LRS65_13665 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LRS65_13665 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain LRS65_13675 PF00512 His Kinase A (phospho-acceptor) domain LRS65_13675 PF00672 HAMP domain LRS65_13675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_13680 PF00072 Response regulator receiver domain LRS65_13680 PF00486 Transcriptional regulatory protein, C terminal LRS65_13700 PF13419 Haloacid dehalogenase-like hydrolase LRS65_13705 PF01048 Phosphorylase superfamily LRS65_13710 PF03808 Glycosyl transferase WecB/TagA/CpsF family LRS65_13715 PF01432 Peptidase family M3 LRS65_13715 PF08439 Oligopeptidase F LRS65_13720 PF02645 Uncharacterised protein, DegV family COG1307 LRS65_13725 PF07552 Spore Coat Protein X and V domain LRS65_13760 PF07690 Major Facilitator Superfamily LRS65_13770 PF04519 Polymer-forming cytoskeletal LRS65_13775 PF13171 Protein of unknown function (DUF4004) LRS65_13780 PF12793 Sugar transport-related sRNA regulator N-term LRS65_13780 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LRS65_13785 PF07690 Major Facilitator Superfamily LRS65_13805 PF04226 Transglycosylase associated protein LRS65_13855 PF00155 Aminotransferase class I and II LRS65_13860 PF07977 FabA-like domain LRS65_13865 PF03630 Fumble LRS65_13885 PF00005 ABC transporter LRS65_13935 PF01594 AI-2E family transporter LRS65_13950 PF00296 Luciferase-like monooxygenase LRS65_13955 PF00528 Binding-protein-dependent transport system inner membrane component LRS65_13960 PF09084 NMT1/THI5 like LRS65_13965 PF00005 ABC transporter LRS65_14000 PF02522 Aminoglycoside 3-N-acetyltransferase LRS65_14010 PF13536 Putative multidrug resistance efflux transporter LRS65_14015 PF12867 DinB superfamily LRS65_14035 PF08713 DNA alkylation repair enzyme LRS65_14040 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LRS65_14050 PF01522 Polysaccharide deacetylase LRS65_14060 PF03741 Integral membrane protein TerC family LRS65_14065 PF00884 Sulfatase LRS65_14070 PF00005 ABC transporter LRS65_14070 PF12848 ABC transporter LRS65_14080 PF03176 MMPL family LRS65_14085 PF16295 Tetracyclin repressor-like, C-terminal domain LRS65_14085 PF00440 Bacterial regulatory proteins, tetR family LRS65_14095 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LRS65_14100 PF01842 ACT domain LRS65_14100 PF02153 Prephenate dehydrogenase LRS65_14105 PF00155 Aminotransferase class I and II LRS65_14110 PF01264 Chorismate synthase LRS65_14115 PF01817 Chorismate mutase type II LRS65_14115 PF00793 DAHP synthetase I family LRS65_14135 PF01636 Phosphotransferase enzyme family LRS65_14160 PF06725 3D domain LRS65_14160 PF01476 LysM domain LRS65_14170 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LRS65_14175 PF01565 FAD binding domain LRS65_14175 PF08031 Berberine and berberine like LRS65_14195 PF06039 Malate:quinone oxidoreductase (Mqo) LRS65_14200 PF13407 Periplasmic binding protein domain LRS65_14205 PF02653 Branched-chain amino acid transport system / permease component LRS65_14210 PF02653 Branched-chain amino acid transport system / permease component LRS65_14215 PF00005 ABC transporter LRS65_14220 PF00325 Bacterial regulatory proteins, crp family LRS65_14220 PF04198 Putative sugar-binding domain LRS65_14225 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LRS65_14225 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LRS65_14235 PF01791 DeoC/LacD family aldolase LRS65_14250 PF03992 Antibiotic biosynthesis monooxygenase LRS65_14270 PF01773 Na+ dependent nucleoside transporter N-terminus LRS65_14270 PF07662 Na+ dependent nucleoside transporter C-terminus LRS65_14275 PF00171 Aldehyde dehydrogenase family LRS65_14280 PF01472 PUA domain LRS65_14280 PF00696 Amino acid kinase family LRS65_14285 PF14748 Pyrroline-5-carboxylate reductase dimerisation LRS65_14285 PF03807 NADP oxidoreductase coenzyme F420-dependent LRS65_14290 PF01546 Peptidase family M20/M25/M40 LRS65_14295 PF01614 Bacterial transcriptional regulator LRS65_14295 PF09339 IclR helix-turn-helix domain LRS65_14300 PF00324 Amino acid permease LRS65_14310 PF00487 Fatty acid desaturase LRS65_14315 PF05547 Immune inhibitor A peptidase M6 LRS65_14320 PF04294 VanW like protein LRS65_14325 PF00245 Alkaline phosphatase LRS65_14330 PF11188 Protein of unknown function (DUF2975) LRS65_14335 PF13443 Cro/C1-type HTH DNA-binding domain LRS65_14355 PF13302 Acetyltransferase (GNAT) domain LRS65_14360 PF12681 Glyoxalase-like domain LRS65_14385 PF07726 ATPase family associated with various cellular activities (AAA) LRS65_14385 PF17863 AAA lid domain LRS65_14400 PF07690 Major Facilitator Superfamily LRS65_14410 PF00535 Glycosyl transferase family 2 LRS65_14425 PF00535 Glycosyl transferase family 2 LRS65_14430 PF00535 Glycosyl transferase family 2 LRS65_14440 PF00202 Aminotransferase class-III LRS65_14445 PF00199 Catalase LRS65_14445 PF06628 Catalase-related immune-responsive LRS65_14450 PF18496 Collagenase G catalytic helper subdomain LRS65_14450 PF01752 Collagenase LRS65_14450 PF08453 Peptidase family M9 N-terminal LRS65_14450 PF04151 Bacterial pre-peptidase C-terminal domain LRS65_14460 PF01979 Amidohydrolase family LRS65_14460 PF13382 Adenine deaminase C-terminal domain LRS65_14465 PF00144 Beta-lactamase LRS65_14485 PF07726 ATPase family associated with various cellular activities (AAA) LRS65_14485 PF17863 AAA lid domain LRS65_14505 PF14436 Bacterial EndoU nuclease LRS65_14505 PF04740 LXG domain of WXG superfamily LRS65_14525 PF13333 Integrase core domain LRS65_14525 PF13276 HTH-like domain LRS65_14525 PF00665 Integrase core domain LRS65_14535 PF00881 Nitroreductase family LRS65_14540 PF01047 MarR family LRS65_14545 PF00679 Elongation factor G C-terminus LRS65_14545 PF14492 Elongation Factor G, domain II LRS65_14545 PF03764 Elongation factor G, domain IV LRS65_14545 PF00009 Elongation factor Tu GTP binding domain LRS65_14555 PF00293 NUDIX domain LRS65_14570 PF16363 GDP-mannose 4,6 dehydratase LRS65_14580 PF12833 Helix-turn-helix domain LRS65_14585 PF14437 MafB19-like deaminase LRS65_14585 PF11734 TilS substrate C-terminal domain LRS65_14585 PF01171 PP-loop family LRS65_14590 PF00583 Acetyltransferase (GNAT) family LRS65_14605 PF00892 EamA-like transporter family LRS65_14610 PF00392 Bacterial regulatory proteins, gntR family LRS65_14610 PF00155 Aminotransferase class I and II LRS65_14615 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LRS65_14620 PF13031 Protein of unknown function (DUF3892) LRS65_14650 PF01925 Sulfite exporter TauE/SafE LRS65_14660 PF00324 Amino acid permease LRS65_14670 PF08713 DNA alkylation repair enzyme LRS65_14690 PF00293 NUDIX domain LRS65_14695 PF04989 Cephalosporin hydroxylase LRS65_14700 PF10502 Signal peptidase, peptidase S26 LRS65_14705 PF03717 Penicillin-binding Protein dimerisation domain LRS65_14705 PF00905 Penicillin binding protein transpeptidase domain LRS65_14710 PF02146 Sir2 family LRS65_14715 PF01470 Pyroglutamyl peptidase LRS65_14730 PF03746 LamB/YcsF family LRS65_14735 PF02626 Carboxyltransferase domain, subdomain A and B LRS65_14740 PF02682 Carboxyltransferase domain, subdomain C and D LRS65_14745 PF01614 Bacterial transcriptional regulator LRS65_14745 PF09339 IclR helix-turn-helix domain LRS65_14750 PF10502 Signal peptidase, peptidase S26 LRS65_14755 PF03932 CutC family LRS65_14770 PF02770 Acyl-CoA dehydrogenase, middle domain LRS65_14770 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LRS65_14770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRS65_14785 PF07670 Nucleoside recognition LRS65_14800 PF10903 Protein of unknown function (DUF2691) LRS65_14805 PF02915 Rubrerythrin LRS65_14820 PF00440 Bacterial regulatory proteins, tetR family LRS65_14825 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LRS65_14825 PF00391 PEP-utilising enzyme, mobile domain LRS65_14830 PF08386 TAP-like protein LRS65_14830 PF00561 alpha/beta hydrolase fold LRS65_14835 PF01522 Polysaccharide deacetylase LRS65_14855 PF00005 ABC transporter LRS65_14860 PF00005 ABC transporter LRS65_14865 PF00528 Binding-protein-dependent transport system inner membrane component LRS65_14865 PF12911 N-terminal TM domain of oligopeptide transport permease C LRS65_14870 PF00528 Binding-protein-dependent transport system inner membrane component LRS65_14875 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LRS65_14880 PF10100 Staphylopine dehydrogenase LRS65_14895 PF00561 alpha/beta hydrolase fold LRS65_14900 PF13529 Peptidase_C39 like family LRS65_14905 PF00753 Metallo-beta-lactamase superfamily LRS65_14925 PF08892 YqcI/YcgG family LRS65_14930 PF01810 LysE type translocator LRS65_14935 PF00324 Amino acid permease LRS65_14945 PF00269 Small, acid-soluble spore proteins, alpha/beta type LRS65_14950 PF10710 Protein of unknown function (DUF2512) LRS65_14955 PF11553 Protein of unknown function (DUF3231) LRS65_14960 PF00269 Small, acid-soluble spore proteins, alpha/beta type LRS65_14965 PF13823 Alcohol dehydrogenase GroES-associated LRS65_14965 PF08240 Alcohol dehydrogenase GroES-like domain LRS65_14965 PF00107 Zinc-binding dehydrogenase LRS65_14975 PF10415 Fumarase C C-terminus LRS65_14975 PF00206 Lyase LRS65_14980 PF17763 Glutaminase/Asparaginase C-terminal domain LRS65_14980 PF00710 Asparaginase, N-terminal LRS65_14985 PF01381 Helix-turn-helix LRS65_15005 PF05504 Spore germination B3/ GerAC like, C-terminal LRS65_15010 PF03845 Spore germination protein LRS65_15015 PF03323 Bacillus/Clostridium GerA spore germination protein LRS65_15020 PF13426 PAS domain LRS65_15020 PF13188 PAS domain LRS65_15020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_15020 PF00512 His Kinase A (phospho-acceptor) domain LRS65_15020 PF00989 PAS fold LRS65_15025 PF05791 Bacillus haemolytic enterotoxin (HBL) LRS65_15030 PF05791 Bacillus haemolytic enterotoxin (HBL) LRS65_15045 PF17853 GGDEF-like domain LRS65_15045 PF12833 Helix-turn-helix domain LRS65_15060 PF01541 GIY-YIG catalytic domain LRS65_15060 PF12826 Helix-hairpin-helix motif LRS65_15060 PF08459 UvrC Helix-hairpin-helix N-terminal LRS65_15060 PF02151 UvrB/uvrC motif LRS65_15065 PF13520 Amino acid permease LRS65_15070 PF05525 Branched-chain amino acid transport protein LRS65_15075 PF03807 NADP oxidoreductase coenzyme F420-dependent LRS65_15075 PF14748 Pyrroline-5-carboxylate reductase dimerisation LRS65_15080 PF13564 DoxX-like family LRS65_15085 PF00390 Malic enzyme, N-terminal domain LRS65_15085 PF03949 Malic enzyme, NAD binding domain LRS65_15095 PF05504 Spore germination B3/ GerAC like, C-terminal LRS65_15100 PF03845 Spore germination protein LRS65_15105 PF03323 Bacillus/Clostridium GerA spore germination protein LRS65_15110 PF08664 YcbB domain LRS65_15110 PF00072 Response regulator receiver domain LRS65_15115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_15120 PF04960 Glutaminase LRS65_15125 PF01235 Sodium:alanine symporter family LRS65_15150 PF00144 Beta-lactamase LRS65_15160 PF00149 Calcineurin-like phosphoesterase LRS65_15160 PF02872 5'-nucleotidase, C-terminal domain LRS65_15160 PF17936 Bacterial Ig domain LRS65_15165 PF00561 alpha/beta hydrolase fold LRS65_15170 PF00857 Isochorismatase family LRS65_15185 PF01979 Amidohydrolase family LRS65_15190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRS65_15190 PF03466 LysR substrate binding domain LRS65_15195 PF01047 MarR family LRS65_15200 PF01544 CorA-like Mg2+ transporter protein LRS65_15220 PF13026 Protein of unknown function (DUF3887) LRS65_15220 PF12146 Serine aminopeptidase, S33 LRS65_15235 PF03073 TspO/MBR family LRS65_15240 PF00875 DNA photolyase LRS65_15240 PF03441 FAD binding domain of DNA photolyase LRS65_15265 PF07859 alpha/beta hydrolase fold LRS65_15275 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) LRS65_15280 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LRS65_15280 PF00361 Proton-conducting membrane transporter LRS65_15285 PF10057 Uncharacterized conserved protein (DUF2294) LRS65_15290 PF01522 Polysaccharide deacetylase LRS65_15295 PF00583 Acetyltransferase (GNAT) family LRS65_15300 PF01040 UbiA prenyltransferase family LRS65_15305 PF01965 DJ-1/PfpI family LRS65_15305 PF12833 Helix-turn-helix domain LRS65_15315 PF01451 Low molecular weight phosphotyrosine protein phosphatase LRS65_15320 PF01758 Sodium Bile acid symporter family LRS65_15325 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LRS65_15330 PF01022 Bacterial regulatory protein, arsR family LRS65_15335 PF00144 Beta-lactamase LRS65_15345 PF07993 Male sterility protein LRS65_15345 PF00550 Phosphopantetheine attachment site LRS65_15350 PF18665 Tetracyclin repressor-like, C-terminal domain LRS65_15350 PF00440 Bacterial regulatory proteins, tetR family LRS65_15355 PF07690 Major Facilitator Superfamily LRS65_15360 PF00440 Bacterial regulatory proteins, tetR family LRS65_15370 PF01037 Lrp/AsnC ligand binding domain LRS65_15385 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LRS65_15405 PF00144 Beta-lactamase LRS65_15410 PF00144 Beta-lactamase LRS65_15415 PF08803 Putative mono-oxygenase ydhR LRS65_15425 PF12802 MarR family LRS65_15450 PF00486 Transcriptional regulatory protein, C terminal LRS65_15450 PF00072 Response regulator receiver domain LRS65_15455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_15455 PF00512 His Kinase A (phospho-acceptor) domain LRS65_15455 PF00672 HAMP domain LRS65_15485 PF00196 Bacterial regulatory proteins, luxR family LRS65_15485 PF00072 Response regulator receiver domain LRS65_15495 PF00005 ABC transporter LRS65_15500 PF00512 His Kinase A (phospho-acceptor) domain LRS65_15500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_15525 PF00067 Cytochrome P450 LRS65_15525 PF00175 Oxidoreductase NAD-binding domain LRS65_15525 PF00258 Flavodoxin LRS65_15525 PF00667 FAD binding domain LRS65_15530 PF07690 Major Facilitator Superfamily LRS65_15550 PF00291 Pyridoxal-phosphate dependent enzyme LRS65_15560 PF01139 tRNA-splicing ligase RtcB LRS65_15570 PF04072 Leucine carboxyl methyltransferase LRS65_15585 PF00005 ABC transporter LRS65_15590 PF02687 FtsX-like permease family LRS65_15610 PF00672 HAMP domain LRS65_15610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_15610 PF00512 His Kinase A (phospho-acceptor) domain LRS65_15615 PF00072 Response regulator receiver domain LRS65_15615 PF00486 Transcriptional regulatory protein, C terminal LRS65_15625 PF01047 MarR family LRS65_15630 PF00583 Acetyltransferase (GNAT) family LRS65_15635 PF04299 Putative FMN-binding domain LRS65_15640 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LRS65_15640 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LRS65_15650 PF02016 LD-carboxypeptidase N-terminal domain LRS65_15650 PF17676 LD-carboxypeptidase C-terminal domain LRS65_15670 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LRS65_15670 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LRS65_15670 PF01842 ACT domain LRS65_15675 PF00266 Aminotransferase class-V LRS65_15690 PF07883 Cupin domain LRS65_15695 PF12833 Helix-turn-helix domain LRS65_15695 PF01497 Periplasmic binding protein LRS65_15700 PF01804 Penicillin amidase LRS65_15710 PF01476 LysM domain LRS65_15710 PF01510 N-acetylmuramoyl-L-alanine amidase LRS65_15710 PF01471 Putative peptidoglycan binding domain LRS65_15800 PF02557 D-alanyl-D-alanine carboxypeptidase LRS65_15805 PF09587 Bacterial capsule synthesis protein PGA_cap LRS65_15810 PF14044 NETI protein LRS65_15815 PF07690 Major Facilitator Superfamily LRS65_15825 PF12697 Alpha/beta hydrolase family LRS65_15840 PF01047 MarR family LRS65_15845 PF07690 Major Facilitator Superfamily LRS65_15850 PF00144 Beta-lactamase LRS65_15855 PF12679 ABC-2 family transporter protein LRS65_15860 PF00005 ABC transporter LRS65_15860 PF13732 Domain of unknown function (DUF4162) LRS65_15865 PF13396 Phospholipase_D-nuclease N-terminal LRS65_15875 PF17314 Family of unknown function (DUF5360) LRS65_15880 PF00893 Small Multidrug Resistance protein LRS65_15885 PF00440 Bacterial regulatory proteins, tetR family LRS65_15895 PF00144 Beta-lactamase LRS65_15915 PF02525 Flavodoxin-like fold LRS65_15935 PF14256 YwiC-like protein LRS65_15945 PF00005 ABC transporter LRS65_15965 PF03737 Aldolase/RraA LRS65_15970 PF03606 C4-dicarboxylate anaerobic carrier LRS65_15975 PF04231 Endonuclease I LRS65_15990 PF04073 Aminoacyl-tRNA editing domain LRS65_15995 PF03129 Anticodon binding domain LRS65_15995 PF13393 Histidyl-tRNA synthetase LRS65_16010 PF01638 HxlR-like helix-turn-helix LRS65_16015 PF00881 Nitroreductase family LRS65_16025 PF00224 Pyruvate kinase, barrel domain LRS65_16025 PF00391 PEP-utilising enzyme, mobile domain LRS65_16025 PF02887 Pyruvate kinase, alpha/beta domain LRS65_16055 PF00005 ABC transporter LRS65_16080 PF13419 Haloacid dehalogenase-like hydrolase LRS65_16090 PF13350 Tyrosine phosphatase family LRS65_16110 PF00293 NUDIX domain LRS65_16110 PF13344 Haloacid dehalogenase-like hydrolase LRS65_16120 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LRS65_16125 PF00480 ROK family LRS65_16130 PF07690 Major Facilitator Superfamily LRS65_16135 PF14602 Hexapeptide repeat of succinyl-transferase LRS65_16135 PF12464 Maltose acetyltransferase LRS65_16140 PF00579 tRNA synthetases class I (W and Y) LRS65_16145 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LRS65_16145 PF13288 DXP reductoisomerase C-terminal domain LRS65_16145 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LRS65_16150 PF01594 AI-2E family transporter LRS65_16180 PF08003 Protein of unknown function (DUF1698) LRS65_16190 PF07690 Major Facilitator Superfamily LRS65_16210 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LRS65_16220 PF01595 Cyclin M transmembrane N-terminal domain LRS65_16220 PF03471 Transporter associated domain LRS65_16220 PF00571 CBS domain LRS65_16225 PF13411 MerR HTH family regulatory protein LRS65_16235 PF00483 Nucleotidyl transferase LRS65_16240 PF16363 GDP-mannose 4,6 dehydratase LRS65_16245 PF08421 Putative zinc binding domain LRS65_16245 PF08484 C-methyltransferase C-terminal domain LRS65_16250 PF01370 NAD dependent epimerase/dehydratase family LRS65_16265 PF00892 EamA-like transporter family LRS65_16275 PF00805 Pentapeptide repeats (8 copies) LRS65_16280 PF06906 Protein of unknown function (DUF1272) LRS65_16285 PF10282 Lactonase, 7-bladed beta-propeller LRS65_16290 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LRS65_16290 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LRS65_16295 PF02447 GntP family permease LRS65_16300 PF00923 Transaldolase/Fructose-6-phosphate aldolase LRS65_16305 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LRS65_16305 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LRS65_16310 PF00456 Transketolase, thiamine diphosphate binding domain LRS65_16310 PF02780 Transketolase, C-terminal domain LRS65_16310 PF02779 Transketolase, pyrimidine binding domain LRS65_16315 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LRS65_16315 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LRS65_16320 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LRS65_16320 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LRS65_16325 PF08240 Alcohol dehydrogenase GroES-like domain LRS65_16325 PF00107 Zinc-binding dehydrogenase LRS65_16330 PF00296 Luciferase-like monooxygenase LRS65_16340 PF00550 Phosphopantetheine attachment site LRS65_16340 PF00698 Acyl transferase domain LRS65_16340 PF08240 Alcohol dehydrogenase GroES-like domain LRS65_16340 PF00107 Zinc-binding dehydrogenase LRS65_16340 PF00109 Beta-ketoacyl synthase, N-terminal domain LRS65_16340 PF16197 Ketoacyl-synthetase C-terminal extension LRS65_16340 PF02801 Beta-ketoacyl synthase, C-terminal domain LRS65_16340 PF08659 KR domain LRS65_16340 PF14765 Polyketide synthase dehydratase LRS65_16345 PF00106 short chain dehydrogenase LRS65_16350 PF07504 Fungalysin/Thermolysin Propeptide Motif LRS65_16350 PF01447 Thermolysin metallopeptidase, catalytic domain LRS65_16350 PF02868 Thermolysin metallopeptidase, alpha-helical domain LRS65_16350 PF03413 Peptidase propeptide and YPEB domain LRS65_16360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LRS65_16360 PF00672 HAMP domain LRS65_16360 PF12729 Four helix bundle sensory module for signal transduction LRS65_16365 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) LRS65_16370 PF01872 RibD C-terminal domain LRS65_16370 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LRS65_16375 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LRS65_16375 PF00925 GTP cyclohydrolase II LRS65_16380 PF01638 HxlR-like helix-turn-helix LRS65_16395 PF00248 Aldo/keto reductase family LRS65_16400 PF07690 Major Facilitator Superfamily LRS65_16410 PF03928 Haem-degrading LRS65_16425 PF03831 PhnA domain LRS65_16425 PF08274 PhnA Zinc-Ribbon LRS65_16430 PF01740 STAS domain LRS65_16430 PF00916 Sulfate permease family LRS65_16470 PF03960 ArsC family LRS65_16475 PF01638 HxlR-like helix-turn-helix LRS65_16480 PF00392 Bacterial regulatory proteins, gntR family LRS65_16480 PF07702 UTRA domain LRS65_16485 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LRS65_16485 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LRS65_16495 PF01638 HxlR-like helix-turn-helix LRS65_16500 PF01638 HxlR-like helix-turn-helix LRS65_16505 PF00248 Aldo/keto reductase family LRS65_16550 PF02567 Phenazine biosynthesis-like protein LRS65_16560 PF00501 AMP-binding enzyme LRS65_16560 PF13193 AMP-binding enzyme C-terminal domain LRS65_16565 PF02525 Flavodoxin-like fold LRS65_16570 PF01638 HxlR-like helix-turn-helix LRS65_16585 PF01022 Bacterial regulatory protein, arsR family LRS65_16590 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain LRS65_16590 PF01522 Polysaccharide deacetylase LRS65_16595 PF12791 Anti-sigma factor N-terminus LRS65_16600 PF04542 Sigma-70 region 2 LRS65_16605 PF00535 Glycosyl transferase family 2 LRS65_16605 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 LRS65_16610 PF01810 LysE type translocator LRS65_16640 PF01061 ABC-2 type transporter LRS65_16645 PF00005 ABC transporter LRS65_16645 PF13732 Domain of unknown function (DUF4162) LRS65_16665 PF03063 Prismane/CO dehydrogenase family LRS65_16670 PF00753 Metallo-beta-lactamase superfamily LRS65_16685 PF00144 Beta-lactamase LRS65_16725 PF00753 Metallo-beta-lactamase superfamily LRS65_16730 PF00324 Amino acid permease LRS65_16735 PF07690 Major Facilitator Superfamily LRS65_16760 PF02585 GlcNAc-PI de-N-acetylase LRS65_16765 PF08830 Protein of unknown function (DUF1806) LRS65_16770 PF03600 Citrate transporter LRS65_16785 PF01497 Periplasmic binding protein LRS65_16790 PF01032 FecCD transport family LRS65_16795 PF01032 FecCD transport family LRS65_16800 PF05675 Protein of unknown function (DUF817) LRS65_16805 PF13170 Protein of unknown function (DUF4003) LRS65_16820 PF13302 Acetyltransferase (GNAT) domain LRS65_16825 PF10901 Protein of unknown function (DUF2690) LRS65_16835 PF03466 LysR substrate binding domain LRS65_16835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRS65_16840 PF00107 Zinc-binding dehydrogenase LRS65_16840 PF08240 Alcohol dehydrogenase GroES-like domain LRS65_16855 PF01713 Smr domain LRS65_16855 PF00488 MutS domain V LRS65_16865 PF09154 Domain of unknown function (DUF1939) LRS65_16865 PF00128 Alpha amylase, catalytic domain LRS65_16870 PF00797 N-acetyltransferase LRS65_16875 PF01432 Peptidase family M3 LRS65_16875 PF08439 Oligopeptidase F LRS65_16900 PF06146 Phosphate-starvation-inducible E LRS65_16905 PF04371 Porphyromonas-type peptidyl-arginine deiminase LRS65_16910 PF00144 Beta-lactamase LRS65_16925 PF03466 LysR substrate binding domain LRS65_16925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRS65_16935 PF03009 Glycerophosphoryl diester phosphodiesterase family LRS65_16940 PF01494 FAD binding domain LRS65_16945 PF01022 Bacterial regulatory protein, arsR family LRS65_16950 PF08240 Alcohol dehydrogenase GroES-like domain LRS65_16950 PF00107 Zinc-binding dehydrogenase LRS65_16955 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LRS65_16960 PF18801 response regulator aspartate phosphatase H, N terminal LRS65_16975 PF01565 FAD binding domain LRS65_16975 PF02913 FAD linked oxidases, C-terminal domain LRS65_17000 PF01066 CDP-alcohol phosphatidyltransferase LRS65_17005 PF00753 Metallo-beta-lactamase superfamily LRS65_17005 PF00581 Rhodanese-like domain LRS65_17010 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRS65_17035 PF16363 GDP-mannose 4,6 dehydratase LRS65_17040 PF18801 response regulator aspartate phosphatase H, N terminal LRS65_17050 PF02743 Cache domain LRS65_17050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LRS65_17050 PF00672 HAMP domain LRS65_17075 PF00440 Bacterial regulatory proteins, tetR family LRS65_17080 PF07968 Leukocidin/Hemolysin toxin family LRS65_17085 PF01520 N-acetylmuramoyl-L-alanine amidase LRS65_17085 PF00395 S-layer homology domain LRS65_17110 PF00512 His Kinase A (phospho-acceptor) domain LRS65_17110 PF00989 PAS fold LRS65_17110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_17115 PF18496 Collagenase G catalytic helper subdomain LRS65_17115 PF01752 Collagenase LRS65_17115 PF08453 Peptidase family M9 N-terminal LRS65_17120 PF02308 MgtC family LRS65_17130 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LRS65_17135 PF04294 VanW like protein LRS65_17145 PF13037 Domain of unknown function (DUF3898) LRS65_17145 PF13039 Protein of unknown function (DUF3900) LRS65_17160 PF00313 'Cold-shock' DNA-binding domain LRS65_17170 PF00258 Flavodoxin LRS65_17180 PF00293 NUDIX domain LRS65_17190 PF00132 Bacterial transferase hexapeptide (six repeats) LRS65_17200 PF00106 short chain dehydrogenase LRS65_17210 PF00206 Lyase LRS65_17210 PF14698 Argininosuccinate lyase C-terminal LRS65_17220 PF01156 Inosine-uridine preferring nucleoside hydrolase LRS65_17225 PF00474 Sodium:solute symporter family LRS65_17235 PF00171 Aldehyde dehydrogenase family LRS65_17245 PF14151 YfhD-like protein LRS65_17250 PF13249 Squalene-hopene cyclase N-terminal domain LRS65_17250 PF13243 Squalene-hopene cyclase C-terminal domain LRS65_17255 PF02681 Divergent PAP2 family LRS65_17260 PF00892 EamA-like transporter family LRS65_17265 PF06961 Protein of unknown function (DUF1294) LRS65_17280 PF10609 NUBPL iron-transfer P-loop NTPase LRS65_17290 PF02391 MoaE protein LRS65_17295 PF03453 MoeA N-terminal region (domain I and II) LRS65_17295 PF00994 Probable molybdopterin binding domain LRS65_17295 PF03454 MoeA C-terminal region (domain IV) LRS65_17300 PF00899 ThiF family LRS65_17305 PF01226 Formate/nitrite transporter LRS65_17310 PF04055 Radical SAM superfamily LRS65_17310 PF06463 Molybdenum Cofactor Synthesis C LRS65_17315 PF02634 FdhD/NarQ family LRS65_17320 PF10057 Uncharacterized conserved protein (DUF2294) LRS65_17325 PF07849 Protein of unknown function (DUF1641) LRS65_17330 PF00384 Molybdopterin oxidoreductase LRS65_17330 PF01568 Molydopterin dinucleotide binding domain LRS65_17330 PF00037 4Fe-4S binding domain LRS65_17330 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LRS65_17330 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LRS65_17335 PF03323 Bacillus/Clostridium GerA spore germination protein LRS65_17350 PF13520 Amino acid permease LRS65_17385 PF08241 Methyltransferase domain LRS65_17390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LRS65_17395 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LRS65_17400 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LRS65_17405 PF00375 Sodium:dicarboxylate symporter family LRS65_17410 PF03816 Cell envelope-related transcriptional attenuator domain LRS65_17420 PF04542 Sigma-70 region 2 LRS65_17420 PF08281 Sigma-70, region 4 LRS65_17430 PF13732 Domain of unknown function (DUF4162) LRS65_17430 PF00005 ABC transporter LRS65_17450 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LRS65_17450 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LRS65_17455 PF00521 DNA gyrase/topoisomerase IV, subunit A LRS65_17455 PF03989 DNA gyrase C-terminal domain, beta-propeller LRS65_17460 PF00204 DNA gyrase B LRS65_17460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_17460 PF01751 Toprim domain LRS65_17460 PF00986 DNA gyrase B subunit, carboxyl terminus LRS65_17465 PF13380 CoA binding domain LRS65_17470 PF13180 PDZ domain LRS65_17475 PF00072 Response regulator receiver domain LRS65_17475 PF00486 Transcriptional regulatory protein, C terminal LRS65_17480 PF04055 Radical SAM superfamily LRS65_17485 PF03477 ATP cone domain LRS65_17485 PF13597 Anaerobic ribonucleoside-triphosphate reductase LRS65_17490 PF02660 Glycerol-3-phosphate acyltransferase LRS65_17495 PF01521 Iron-sulphur cluster biosynthesis LRS65_17500 PF03061 Thioesterase superfamily LRS65_17505 PF01476 LysM domain LRS65_17505 PF00704 Glycosyl hydrolases family 18 LRS65_17515 PF08177 Small acid-soluble spore protein N family LRS65_17520 PF13040 Fur-regulated basic protein B LRS65_17525 PF11490 DNA polymerase III polC-type N-terminus II LRS65_17525 PF07733 Bacterial DNA polymerase III alpha NTPase domain LRS65_17525 PF14579 Helix-hairpin-helix motif LRS65_17525 PF00929 Exonuclease LRS65_17525 PF01336 OB-fold nucleic acid binding domain LRS65_17525 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LRS65_17525 PF02811 PHP domain LRS65_17530 PF00578 AhpC/TSA family LRS65_17545 PF00005 ABC transporter LRS65_17545 PF00664 ABC transporter transmembrane region LRS65_17550 PF00330 Aconitase family (aconitate hydratase) LRS65_17550 PF00694 Aconitase C-terminal domain LRS65_17560 PF01522 Polysaccharide deacetylase LRS65_17570 PF08179 Small acid-soluble spore protein P family LRS65_17580 PF07690 Major Facilitator Superfamily LRS65_17590 PF02272 DHHA1 domain LRS65_17590 PF01411 tRNA synthetases class II (A) LRS65_17590 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LRS65_17595 PF13344 Haloacid dehalogenase-like hydrolase LRS65_17595 PF00293 NUDIX domain LRS65_17605 PF00108 Thiolase, N-terminal domain LRS65_17605 PF02803 Thiolase, C-terminal domain LRS65_17610 PF00501 AMP-binding enzyme LRS65_17610 PF13193 AMP-binding enzyme C-terminal domain LRS65_17615 PF02632 BioY family LRS65_17620 PF00501 AMP-binding enzyme LRS65_17620 PF13193 AMP-binding enzyme C-terminal domain LRS65_17630 PF00005 ABC transporter LRS65_17635 PF01381 Helix-turn-helix LRS65_17650 PF05532 CsbD-like LRS65_17670 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LRS65_17670 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LRS65_17680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_17680 PF00512 His Kinase A (phospho-acceptor) domain LRS65_17680 PF00989 PAS fold LRS65_17680 PF13188 PAS domain LRS65_17680 PF13426 PAS domain LRS65_17685 PF01738 Dienelactone hydrolase family LRS65_17690 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LRS65_17695 PF00474 Sodium:solute symporter family LRS65_17705 PF01645 Conserved region in glutamate synthase LRS65_17710 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LRS65_17715 PF02559 CarD-like/TRCF domain LRS65_17720 PF00491 Arginase family LRS65_17725 PF01979 Amidohydrolase family LRS65_17730 PF17392 Urocanase C-terminal domain LRS65_17730 PF17391 Urocanase N-terminal domain LRS65_17730 PF01175 Urocanase Rossmann-like domain LRS65_17735 PF00221 Aromatic amino acid lyase LRS65_17740 PF09021 HutP LRS65_17765 PF11084 Protein of unknown function (DUF2621) LRS65_17770 PF07301 Protein of unknown function (DUF1453) LRS65_17775 PF02683 Cytochrome C biogenesis protein transmembrane region LRS65_17785 PF07687 Peptidase dimerisation domain LRS65_17785 PF01546 Peptidase family M20/M25/M40 LRS65_17795 PF00005 ABC transporter LRS65_17810 PF03466 LysR substrate binding domain LRS65_17810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRS65_17815 PF03788 LrgA family LRS65_17820 PF04172 LrgB-like family LRS65_17825 PF00293 NUDIX domain LRS65_17825 PF13344 Haloacid dehalogenase-like hydrolase LRS65_17835 PF01925 Sulfite exporter TauE/SafE LRS65_17855 PF08239 Bacterial SH3 domain LRS65_17855 PF01183 Glycosyl hydrolases family 25 LRS65_17860 PF00664 ABC transporter transmembrane region LRS65_17860 PF00005 ABC transporter LRS65_17865 PF00664 ABC transporter transmembrane region LRS65_17865 PF00005 ABC transporter LRS65_17870 PF03672 Uncharacterised protein family (UPF0154) LRS65_17875 PF10747 Sporulation inhibitor of replication protein SirA LRS65_17880 PF00456 Transketolase, thiamine diphosphate binding domain LRS65_17880 PF02779 Transketolase, pyrimidine binding domain LRS65_17880 PF02780 Transketolase, C-terminal domain LRS65_17885 PF00528 Binding-protein-dependent transport system inner membrane component LRS65_17890 PF00528 Binding-protein-dependent transport system inner membrane component LRS65_17895 PF00005 ABC transporter LRS65_17900 PF00497 Bacterial extracellular solute-binding proteins, family 3 LRS65_17905 PF00149 Calcineurin-like phosphoesterase LRS65_17905 PF02872 5'-nucleotidase, C-terminal domain LRS65_17910 PF05979 Bacterial protein of unknown function (DUF896) LRS65_17915 PF00239 Resolvase, N terminal domain LRS65_17920 PF01726 LexA DNA binding domain LRS65_17920 PF00717 Peptidase S24-like LRS65_17935 PF03551 Transcriptional regulator PadR-like family LRS65_17940 PF00120 Glutamine synthetase, catalytic domain LRS65_17940 PF03951 Glutamine synthetase, beta-Grasp domain LRS65_17945 PF13411 MerR HTH family regulatory protein LRS65_17950 PF06838 Methionine gamma-lyase LRS65_17955 PF16360 GTP-binding GTPase Middle Region LRS65_17955 PF01926 50S ribosome-binding GTPase LRS65_17955 PF13167 GTP-binding GTPase N-terminal LRS65_17960 PF03458 UPF0126 domain LRS65_17970 PF17866 AAA lid domain LRS65_17970 PF00004 ATPase family associated with various cellular activities (AAA) LRS65_17985 PF17209 Hfq protein LRS65_18000 PF01476 LysM domain LRS65_18000 PF06725 3D domain LRS65_18010 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LRS65_18010 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LRS65_18015 PF00294 pfkB family carbohydrate kinase LRS65_18020 PF08220 DeoR-like helix-turn-helix domain LRS65_18020 PF00455 DeoR C terminal sensor domain LRS65_18025 PF00465 Iron-containing alcohol dehydrogenase LRS65_18030 PF04238 Protein of unknown function (DUF420) LRS65_18040 PF00324 Amino acid permease LRS65_18045 PF00041 Fibronectin type III domain LRS65_18045 PF00704 Glycosyl hydrolases family 18 LRS65_18050 PF10518 TAT (twin-arginine translocation) pathway signal sequence LRS65_18050 PF00149 Calcineurin-like phosphoesterase LRS65_18055 PF01226 Formate/nitrite transporter LRS65_18060 PF00216 Bacterial DNA-binding protein LRS65_18070 PF00403 Heavy-metal-associated domain LRS65_18075 PF00403 Heavy-metal-associated domain LRS65_18080 PF02583 Metal-sensitive transcriptional repressor LRS65_18090 PF00756 Putative esterase LRS65_18095 PF00005 ABC transporter LRS65_18100 PF01032 FecCD transport family LRS65_18105 PF01032 FecCD transport family LRS65_18110 PF01497 Periplasmic binding protein LRS65_18115 PF03372 Endonuclease/Exonuclease/phosphatase family LRS65_18120 PF02805 Metal binding domain of Ada LRS65_18120 PF12833 Helix-turn-helix domain LRS65_18125 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LRS65_18125 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LRS65_18130 PF00730 HhH-GPD superfamily base excision DNA repair protein LRS65_18130 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain LRS65_18135 PF01546 Peptidase family M20/M25/M40 LRS65_18135 PF07687 Peptidase dimerisation domain LRS65_18150 PF00561 alpha/beta hydrolase fold LRS65_18155 PF03707 Bacterial signalling protein N terminal repeat LRS65_18155 PF00563 EAL domain LRS65_18155 PF00990 Diguanylate cyclase, GGDEF domain LRS65_18160 PF04101 Glycosyltransferase family 28 C-terminal domain LRS65_18160 PF03033 Glycosyltransferase family 28 N-terminal domain LRS65_18170 PF16363 GDP-mannose 4,6 dehydratase LRS65_18175 PF08485 Polysaccharide biosynthesis protein C-terminal LRS65_18175 PF02719 Polysaccharide biosynthesis protein LRS65_18190 PF10787 Uncharacterised protein from bacillus cereus group LRS65_18195 PF04172 LrgB-like family LRS65_18200 PF03788 LrgA family LRS65_18205 PF00155 Aminotransferase class I and II LRS65_18205 PF00392 Bacterial regulatory proteins, gntR family LRS65_18215 PF00392 Bacterial regulatory proteins, gntR family LRS65_18215 PF07702 UTRA domain LRS65_18220 PF00232 Glycosyl hydrolase family 1 LRS65_18225 PF00388 Phosphatidylinositol-specific phospholipase C, X domain LRS65_18230 PF00082 Subtilase family LRS65_18235 PF07486 Cell Wall Hydrolase LRS65_18245 PF00884 Sulfatase LRS65_18250 PF00350 Dynamin family LRS65_18260 PF01119 DNA mismatch repair protein, C-terminal domain LRS65_18260 PF08676 MutL C terminal dimerisation domain LRS65_18265 PF00488 MutS domain V LRS65_18265 PF05190 MutS family domain IV LRS65_18265 PF05192 MutS domain III LRS65_18265 PF05188 MutS domain II LRS65_18265 PF01624 MutS domain I LRS65_18270 PF10628 Outer spore coat protein E (CotE) LRS65_18275 PF06133 Control of competence regulator ComK, YlbF/YmcA LRS65_18280 PF00919 Uncharacterized protein family UPF0004 LRS65_18280 PF04055 Radical SAM superfamily LRS65_18280 PF01938 TRAM domain LRS65_18285 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LRS65_18290 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase LRS65_18290 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg LRS65_18290 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II LRS65_18295 PF01244 Membrane dipeptidase (Peptidase family M19) LRS65_18300 PF04232 Stage V sporulation protein S (SpoVS) LRS65_18305 PF13277 YmdB-like protein LRS65_18310 PF01966 HD domain LRS65_18310 PF00013 KH domain LRS65_18310 PF12072 Domain of unknown function (DUF3552) LRS65_18315 PF00154 recA bacterial DNA recombination protein LRS65_18320 PF00994 Probable molybdopterin binding domain LRS65_18320 PF02464 Competence-damaged protein LRS65_18320 PF18146 Damage-inducible protein CinA KH domain LRS65_18325 PF01066 CDP-alcohol phosphatidyltransferase LRS65_18330 PF13464 Domain of unknown function (DUF4115) LRS65_18340 PF11588 Protein of unknown function (DUF3243) LRS65_18350 PF00675 Insulinase (Peptidase family M16) LRS65_18350 PF05193 Peptidase M16 inactive domain LRS65_18355 PF05193 Peptidase M16 inactive domain LRS65_18360 PF02653 Branched-chain amino acid transport system / permease component LRS65_18365 PF02653 Branched-chain amino acid transport system / permease component LRS65_18370 PF00005 ABC transporter LRS65_18375 PF02608 ABC transporter substrate-binding protein PnrA-like LRS65_18380 PF00392 Bacterial regulatory proteins, gntR family LRS65_18380 PF07702 UTRA domain LRS65_18385 PF17854 FtsK alpha domain LRS65_18385 PF09397 Ftsk gamma domain LRS65_18385 PF01580 FtsK/SpoIIIE family LRS65_18390 PF14035 YlzJ-like protein LRS65_18395 PF00574 Clp protease LRS65_18400 PF00753 Metallo-beta-lactamase superfamily LRS65_18400 PF17770 Ribonuclease J C-terminal domain LRS65_18400 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LRS65_18405 PF00701 Dihydrodipicolinate synthetase family LRS65_18410 PF00696 Amino acid kinase family LRS65_18410 PF13840 ACT domain LRS65_18415 PF01118 Semialdehyde dehydrogenase, NAD binding domain LRS65_18415 PF02774 Semialdehyde dehydrogenase, dimerisation domain LRS65_18435 PF05105 Bacteriophage holin family LRS65_18540 PF11553 Protein of unknown function (DUF3231) LRS65_18550 PF00313 'Cold-shock' DNA-binding domain LRS65_18555 PF00589 Phage integrase family LRS65_18590 PF00772 DnaB-like helicase N terminal domain LRS65_18590 PF03796 DnaB-like helicase C terminal domain LRS65_18625 PF01381 Helix-turn-helix LRS65_18655 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LRS65_18655 PF16924 Dipicolinate synthase subunit A N-terminal domain LRS65_18660 PF05239 PRC-barrel domain LRS65_18665 PF00675 Insulinase (Peptidase family M16) LRS65_18665 PF05193 Peptidase M16 inactive domain LRS65_18670 PF01522 Polysaccharide deacetylase LRS65_18675 PF00013 KH domain LRS65_18675 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LRS65_18675 PF01138 3' exoribonuclease family, domain 1 LRS65_18675 PF03725 3' exoribonuclease family, domain 2 LRS65_18675 PF00575 S1 RNA binding domain LRS65_18680 PF00312 Ribosomal protein S15 LRS65_18685 PF06574 FAD synthetase LRS65_18685 PF01687 Riboflavin kinase LRS65_18690 PF01509 TruB family pseudouridylate synthase (N terminal domain) LRS65_18690 PF16198 tRNA pseudouridylate synthase B C-terminal domain LRS65_18695 PF02033 Ribosome-binding factor A LRS65_18700 PF04456 Protein of unknown function (DUF503) LRS65_18705 PF00009 Elongation factor Tu GTP binding domain LRS65_18705 PF11987 Translation-initiation factor 2 LRS65_18705 PF04760 Translation initiation factor IF-2, N-terminal region LRS65_18710 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family LRS65_18715 PF04296 Protein of unknown function (DUF448) LRS65_18720 PF00575 S1 RNA binding domain LRS65_18720 PF13184 NusA-like KH domain LRS65_18720 PF08529 NusA N-terminal domain LRS65_18725 PF17384 RimP C-terminal SH3 domain LRS65_18725 PF02576 RimP N-terminal domain LRS65_18730 PF00929 Exonuclease LRS65_18730 PF14480 DNA polymerase III polC-type N-terminus I LRS65_18730 PF11490 DNA polymerase III polC-type N-terminus II LRS65_18730 PF07733 Bacterial DNA polymerase III alpha NTPase domain LRS65_18730 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LRS65_18730 PF14579 Helix-hairpin-helix motif LRS65_18730 PF02811 PHP domain LRS65_18735 PF04073 Aminoacyl-tRNA editing domain LRS65_18735 PF03129 Anticodon binding domain LRS65_18735 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LRS65_18740 PF17820 PDZ domain LRS65_18740 PF02163 Peptidase family M50 LRS65_18745 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LRS65_18745 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LRS65_18745 PF13288 DXP reductoisomerase C-terminal domain LRS65_18755 PF01255 Putative undecaprenyl diphosphate synthase LRS65_18760 PF01765 Ribosome recycling factor LRS65_18765 PF00696 Amino acid kinase family LRS65_18770 PF00889 Elongation factor TS LRS65_18775 PF00318 Ribosomal protein S2 LRS65_18780 PF06018 CodY GAF-like domain LRS65_18780 PF08222 CodY helix-turn-helix domain LRS65_18785 PF00004 ATPase family associated with various cellular activities (AAA) LRS65_18785 PF07724 AAA domain (Cdc48 subfamily) LRS65_18785 PF10431 C-terminal, D2-small domain, of ClpB protein LRS65_18790 PF00227 Proteasome subunit LRS65_18795 PF02899 Phage integrase, N-terminal SAM-like domain LRS65_18795 PF00589 Phage integrase family LRS65_18800 PF01134 Glucose inhibited division protein A LRS65_18805 PF01751 Toprim domain LRS65_18805 PF01396 Topoisomerase DNA binding C4 zinc finger LRS65_18805 PF01131 DNA topoisomerase LRS65_18815 PF02629 CoA binding domain LRS65_18815 PF00549 CoA-ligase LRS65_18820 PF08442 ATP-grasp domain LRS65_18820 PF00549 CoA-ligase LRS65_18825 PF01351 Ribonuclease HII LRS65_18830 PF01926 50S ribosome-binding GTPase LRS65_18835 PF10502 Signal peptidase, peptidase S26 LRS65_18840 PF01245 Ribosomal protein L19 LRS65_18845 PF01746 tRNA (Guanine-1)-methyltransferase LRS65_18850 PF01782 RimM N-terminal domain LRS65_18850 PF05239 PRC-barrel domain LRS65_18860 PF00886 Ribosomal protein S16 LRS65_18865 PF00448 SRP54-type protein, GTPase domain LRS65_18865 PF02881 SRP54-type protein, helical bundle domain LRS65_18865 PF02978 Signal peptide binding domain LRS65_18870 PF04297 Putative helix-turn-helix protein, YlxM / p13 like LRS65_18875 PF00448 SRP54-type protein, GTPase domain LRS65_18875 PF02881 SRP54-type protein, helical bundle domain LRS65_18880 PF06470 SMC proteins Flexible Hinge Domain LRS65_18880 PF02463 RecF/RecN/SMC N terminal domain LRS65_18885 PF00035 Double-stranded RNA binding motif LRS65_18885 PF14622 Ribonuclease-III-like LRS65_18890 PF00550 Phosphopantetheine attachment site LRS65_18900 PF00698 Acyl transferase domain LRS65_18905 PF02504 Fatty acid synthesis protein LRS65_18910 PF03061 Thioesterase superfamily LRS65_18915 PF17191 RecG wedge domain LRS65_18915 PF00271 Helicase conserved C-terminal domain LRS65_18915 PF00270 DEAD/DEAH box helicase LRS65_18920 PF02734 DAK2 domain LRS65_18920 PF13684 Dihydroxyacetone kinase family LRS65_18925 PF03780 Asp23 family, cell envelope-related function LRS65_18930 PF00830 Ribosomal L28 family LRS65_18935 PF08183 Stage V sporulation protein family LRS65_18940 PF04263 Thiamin pyrophosphokinase, catalytic domain LRS65_18940 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain LRS65_18945 PF00834 Ribulose-phosphate 3 epimerase family LRS65_18950 PF03193 RsgA GTPase LRS65_18950 PF16745 RsgA N-terminal domain LRS65_18955 PF03793 PASTA domain LRS65_18955 PF00069 Protein kinase domain LRS65_18965 PF04055 Radical SAM superfamily LRS65_18970 PF01029 NusB family LRS65_18970 PF01189 16S rRNA methyltransferase RsmB/F LRS65_18975 PF02911 Formyl transferase, C-terminal domain LRS65_18975 PF00551 Formyl transferase LRS65_18980 PF01327 Polypeptide deformylase LRS65_18985 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LRS65_18985 PF17764 3′ DNA-binding domain (3′BD) LRS65_18985 PF04851 Type III restriction enzyme, res subunit LRS65_18985 PF00271 Helicase conserved C-terminal domain LRS65_18985 PF18074 Primosomal protein N C-terminal domain LRS65_18990 PF04127 DNA / pantothenate metabolism flavoprotein LRS65_18990 PF02441 Flavoprotein LRS65_18995 PF01192 RNA polymerase Rpb6 LRS65_19000 PF00625 Guanylate kinase LRS65_19005 PF04025 Domain of unknown function (DUF370) LRS65_19010 PF08340 Domain of unknown function (DUF1732) LRS65_19010 PF03755 YicC-like family, N-terminal region LRS65_19015 PF00689 Cation transporting ATPase, C-terminus LRS65_19015 PF00690 Cation transporter/ATPase, N-terminus LRS65_19020 PF05670 NFACT protein RNA binding domain LRS65_19030 PF01321 Creatinase/Prolidase N-terminal domain LRS65_19030 PF00557 Metallopeptidase family M24 LRS65_19065 PF00156 Phosphoribosyl transferase domain LRS65_19070 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LRS65_19075 PF01180 Dihydroorotate dehydrogenase LRS65_19080 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B LRS65_19085 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LRS65_19085 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LRS65_19085 PF02142 MGS-like domain LRS65_19090 PF00117 Glutamine amidotransferase class-I LRS65_19090 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LRS65_19095 PF01979 Amidohydrolase family LRS65_19100 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LRS65_19100 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LRS65_19105 PF00860 Permease family LRS65_19110 PF00156 Phosphoribosyl transferase domain LRS65_19115 PF01479 S4 domain LRS65_19115 PF00849 RNA pseudouridylate synthase LRS65_19120 PF01252 Signal peptidase (SPase) II LRS65_19130 PF08264 Anticodon-binding domain of tRNA LRS65_19130 PF00133 tRNA synthetases class I (I, L, M and V) LRS65_19130 PF06827 Zinc finger found in FPG and IleRS LRS65_19135 PF05103 DivIVA protein LRS65_19140 PF01479 S4 domain LRS65_19140 PF17774 Putative RNA-binding domain in YlmH LRS65_19145 PF02325 YGGT family LRS65_19150 PF04472 Cell division protein SepF LRS65_19155 PF01168 Alanine racemase, N-terminal domain LRS65_19160 PF02578 Multi-copper polyphenol oxidoreductase laccase LRS65_19165 PF05239 PRC-barrel domain LRS65_19170 PF04539 Sigma-70 region 3 LRS65_19170 PF04542 Sigma-70 region 2 LRS65_19170 PF04545 Sigma-70, region 4 LRS65_19175 PF04545 Sigma-70, region 4 LRS65_19175 PF04542 Sigma-70 region 2 LRS65_19180 PF03419 Sporulation factor SpoIIGA LRS65_19185 PF12327 FtsZ family, C-terminal domain LRS65_19185 PF00091 Tubulin/FtsZ family, GTPase domain LRS65_19190 PF02491 SHS2 domain inserted in FTSA LRS65_19195 PF08478 POTRA domain, FtsQ-type LRS65_19195 PF03799 Cell division protein FtsQ LRS65_19200 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LRS65_19200 PF01565 FAD binding domain LRS65_19205 PF04101 Glycosyltransferase family 28 C-terminal domain LRS65_19205 PF03033 Glycosyltransferase family 28 N-terminal domain LRS65_19210 PF01098 Cell cycle protein LRS65_19215 PF02875 Mur ligase family, glutamate ligase domain LRS65_19215 PF08245 Mur ligase middle domain LRS65_19220 PF00953 Glycosyl transferase family 4 LRS65_19220 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LRS65_19225 PF01225 Mur ligase family, catalytic domain LRS65_19225 PF02875 Mur ligase family, glutamate ligase domain LRS65_19225 PF08245 Mur ligase middle domain LRS65_19230 PF03793 PASTA domain LRS65_19230 PF03717 Penicillin-binding Protein dimerisation domain LRS65_19230 PF00905 Penicillin binding protein transpeptidase domain LRS65_19235 PF03717 Penicillin-binding Protein dimerisation domain LRS65_19235 PF00905 Penicillin binding protein transpeptidase domain LRS65_19235 PF03793 PASTA domain LRS65_19240 PF04977 Septum formation initiator LRS65_19245 PF01795 MraW methylase family LRS65_19250 PF10079 Bacillithiol biosynthesis BshC LRS65_19255 PF02558 Ketopantoate reductase PanE/ApbA LRS65_19255 PF08546 Ketopantoate reductase PanE/ApbA C terminal LRS65_19260 PF00583 Acetyltransferase (GNAT) family LRS65_19270 PF01783 Ribosomal L32p protein family LRS65_19275 PF02620 Large ribosomal RNA subunit accumulation protein YceD LRS65_19280 PF05636 HIGH Nucleotidyl Transferase LRS65_19285 PF05362 Lon protease (S16) C-terminal proteolytic domain LRS65_19285 PF13180 PDZ domain LRS65_19290 PF01734 Patatin-like phospholipase LRS65_19295 PF07670 Nucleoside recognition LRS65_19300 PF01467 Cytidylyltransferase-like LRS65_19315 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) LRS65_19320 PF06133 Control of competence regulator ComK, YlbF/YmcA LRS65_19325 PF00300 Histidine phosphatase superfamily (branch 1) LRS65_19330 PF14003 YlbE-like protein LRS65_19335 PF14071 Putative coat protein LRS65_19340 PF00188 Cysteine-rich secretory protein family LRS65_19340 PF14504 CAP-associated N-terminal LRS65_19345 PF08868 YugN-like family LRS65_19350 PF00795 Carbon-nitrogen hydrolase LRS65_19355 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) LRS65_19360 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LRS65_19365 PF00510 Cytochrome c oxidase subunit III LRS65_19370 PF00115 Cytochrome C and Quinol oxidase polypeptide I LRS65_19375 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LRS65_19375 PF02790 Cytochrome C oxidase subunit II, transmembrane domain LRS65_19375 PF00034 Cytochrome c LRS65_19380 PF01040 UbiA prenyltransferase family LRS65_19385 PF02628 Cytochrome oxidase assembly protein LRS65_19390 PF00682 HMGL-like LRS65_19390 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LRS65_19390 PF02436 Conserved carboxylase domain LRS65_19390 PF00289 Biotin carboxylase, N-terminal domain LRS65_19390 PF02785 Biotin carboxylase C-terminal domain LRS65_19390 PF00364 Biotin-requiring enzyme LRS65_19395 PF01098 Cell cycle protein LRS65_19400 PF07408 Protein of unknown function (DUF1507) LRS65_19410 PF02562 PhoH-like protein LRS65_19410 PF13638 PIN domain LRS65_19420 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) LRS65_19430 PF14036 YlaH-like protein LRS65_19435 PF03144 Elongation factor Tu domain 2 LRS65_19435 PF00009 Elongation factor Tu GTP binding domain LRS65_19435 PF14492 Elongation Factor G, domain II LRS65_19435 PF00679 Elongation factor G C-terminus LRS65_19445 PF00459 Inositol monophosphatase family LRS65_19455 PF06335 Protein of unknown function (DUF1054) LRS65_19460 PF05256 Uncharacterised protein family (UPF0223) LRS65_19465 PF01276 Orn/Lys/Arg decarboxylase, major domain LRS65_19465 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LRS65_19505 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LRS65_19505 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRS65_19510 PF02817 e3 binding domain LRS65_19510 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LRS65_19510 PF00364 Biotin-requiring enzyme LRS65_19515 PF02779 Transketolase, pyrimidine binding domain LRS65_19515 PF02780 Transketolase, C-terminal domain LRS65_19520 PF00676 Dehydrogenase E1 component LRS65_19530 PF01327 Polypeptide deformylase LRS65_19540 PF07288 Protein of unknown function (DUF1447) LRS65_19545 PF00753 Metallo-beta-lactamase superfamily LRS65_19545 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LRS65_19545 PF17770 Ribonuclease J C-terminal domain LRS65_19550 PF02254 TrkA-N domain LRS65_19550 PF02080 TrkA-C domain LRS65_19560 PF07687 Peptidase dimerisation domain LRS65_19560 PF01546 Peptidase family M20/M25/M40 LRS65_19565 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal LRS65_19565 PF00132 Bacterial transferase hexapeptide (six repeats) LRS65_19565 PF14602 Hexapeptide repeat of succinyl-transferase LRS65_19570 PF03466 LysR substrate binding domain LRS65_19570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRS65_19585 PF04308 Ribonuclease H-like LRS65_19595 PF08796 Protein of unknown function (DUF1797) LRS65_19610 PF10388 EAL-domain associated signalling protein domain LRS65_19610 PF00563 EAL domain LRS65_19620 PF10518 TAT (twin-arginine translocation) pathway signal sequence LRS65_19620 PF00149 Calcineurin-like phosphoesterase LRS65_19630 PF02503 Polyphosphate kinase middle domain LRS65_19630 PF13090 Polyphosphate kinase C-terminal domain 2 LRS65_19630 PF17941 Polyphosphate kinase C-terminal domain 1 LRS65_19630 PF13089 Polyphosphate kinase N-terminal domain LRS65_19635 PF02541 Ppx/GppA phosphatase family LRS65_19640 PF14177 YkyB-like protein LRS65_19665 PF07690 Major Facilitator Superfamily LRS65_19675 PF08267 Cobalamin-independent synthase, N-terminal domain LRS65_19675 PF01717 Cobalamin-independent synthase, Catalytic domain LRS65_19685 PF14040 Deoxyribonuclease NucA/NucB LRS65_19695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_19695 PF00512 His Kinase A (phospho-acceptor) domain LRS65_19705 PF00155 Aminotransferase class I and II LRS65_19710 PF00356 Bacterial regulatory proteins, lacI family LRS65_19710 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LRS65_19715 PF00528 Binding-protein-dependent transport system inner membrane component LRS65_19720 PF00528 Binding-protein-dependent transport system inner membrane component LRS65_19725 PF13416 Bacterial extracellular solute-binding protein LRS65_19730 PF00128 Alpha amylase, catalytic domain LRS65_19730 PF16657 Maltogenic Amylase, C-terminal domain LRS65_19730 PF02903 Alpha amylase, N-terminal ig-like domain LRS65_19735 PF00128 Alpha amylase, catalytic domain LRS65_19735 PF16657 Maltogenic Amylase, C-terminal domain LRS65_19740 PF00005 ABC transporter LRS65_19740 PF17912 MalK OB fold domain LRS65_19740 PF03459 TOBE domain LRS65_19780 PF02803 Thiolase, C-terminal domain LRS65_19780 PF00108 Thiolase, N-terminal domain LRS65_19785 PF00293 NUDIX domain LRS65_19815 PF03551 Transcriptional regulator PadR-like family LRS65_19830 PF01008 Initiation factor 2 subunit family LRS65_19835 PF01636 Phosphotransferase enzyme family LRS65_19840 PF00795 Carbon-nitrogen hydrolase LRS65_19845 PF00155 Aminotransferase class I and II LRS65_19850 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain LRS65_19850 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain LRS65_19860 PF00596 Class II Aldolase and Adducin N-terminal domain LRS65_19865 PF03079 ARD/ARD' family LRS65_19880 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LRS65_19880 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LRS65_19885 PF00144 Beta-lactamase LRS65_19890 PF08448 PAS fold LRS65_19890 PF00990 Diguanylate cyclase, GGDEF domain LRS65_19895 PF00881 Nitroreductase family LRS65_19910 PF02896 PEP-utilising enzyme, TIM barrel domain LRS65_19910 PF00391 PEP-utilising enzyme, mobile domain LRS65_19910 PF05524 PEP-utilising enzyme, N-terminal LRS65_19915 PF00381 PTS HPr component phosphorylation site LRS65_19920 PF00367 phosphotransferase system, EIIB LRS65_19920 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LRS65_19920 PF02378 Phosphotransferase system, EIIC LRS65_19925 PF03123 CAT RNA binding domain LRS65_19925 PF00874 PRD domain LRS65_19935 PF07702 UTRA domain LRS65_19935 PF00392 Bacterial regulatory proteins, gntR family LRS65_19945 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LRS65_19950 PF01979 Amidohydrolase family LRS65_19960 PF04079 Segregation and condensation complex subunit ScpB LRS65_19965 PF02616 Segregation and condensation protein ScpA LRS65_19975 PF03745 Domain of unknown function (DUF309) LRS65_19980 PF00583 Acetyltransferase (GNAT) family LRS65_19985 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LRS65_19990 PF06207 Protein of unknown function (DUF1002) LRS65_20000 PF03323 Bacillus/Clostridium GerA spore germination protein LRS65_20005 PF14097 Stage V sporulation protein AE1 LRS65_20010 PF03862 SpoVAC/SpoVAEB sporulation membrane protein LRS65_20015 PF07451 Stage V sporulation protein AD (SpoVAD) LRS65_20020 PF03862 SpoVAC/SpoVAEB sporulation membrane protein LRS65_20025 PF13782 Stage V sporulation protein AB LRS65_20030 PF12164 Stage V sporulation protein AA LRS65_20040 PF00209 Sodium:neurotransmitter symporter family LRS65_20045 PF04545 Sigma-70, region 4 LRS65_20045 PF04542 Sigma-70 region 2 LRS65_20045 PF04539 Sigma-70 region 3 LRS65_20050 PF13581 Histidine kinase-like ATPase domain LRS65_20055 PF01740 STAS domain LRS65_20060 PF00768 D-alanyl-D-alanine carboxypeptidase LRS65_20060 PF07943 Penicillin-binding protein 5, C-terminal domain LRS65_20065 PF00392 Bacterial regulatory proteins, gntR family LRS65_20070 PF00005 ABC transporter LRS65_20090 PF01047 MarR family LRS65_20100 PF00860 Permease family LRS65_20105 PF01544 CorA-like Mg2+ transporter protein LRS65_20110 PF00591 Glycosyl transferase family, a/b domain LRS65_20110 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain LRS65_20110 PF02885 Glycosyl transferase family, helical bundle domain LRS65_20115 PF01048 Phosphorylase superfamily LRS65_20120 PF01676 Metalloenzyme superfamily LRS65_20130 PF02899 Phage integrase, N-terminal SAM-like domain LRS65_20130 PF00589 Phage integrase family LRS65_20135 PF14004 Protein of unknown function (DUF4227) LRS65_20140 PF01475 Ferric uptake regulator family LRS65_20145 PF01944 Stage II sporulation protein M LRS65_20155 PF00293 NUDIX domain LRS65_20160 PF13072 Mother cell inhibitor of FtsZ LRS65_20165 PF00248 Aldo/keto reductase family LRS65_20170 PF00248 Aldo/keto reductase family LRS65_20175 PF13673 Acetyltransferase (GNAT) domain LRS65_20175 PF04229 GrpB protein LRS65_20185 PF02872 5'-nucleotidase, C-terminal domain LRS65_20185 PF00746 LPXTG cell wall anchor motif LRS65_20185 PF00149 Calcineurin-like phosphoesterase LRS65_20185 PF00565 Staphylococcal nuclease homologue LRS65_20195 PF12146 Serine aminopeptidase, S33 LRS65_20200 PF13726 Na+-H+ antiporter family LRS65_20200 PF03553 Na+/H+ antiporter family LRS65_20205 PF00356 Bacterial regulatory proteins, lacI family LRS65_20210 PF00583 Acetyltransferase (GNAT) family LRS65_20215 PF12146 Serine aminopeptidase, S33 LRS65_20220 PF10827 Protein of unknown function (DUF2552) LRS65_20230 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LRS65_20230 PF01872 RibD C-terminal domain LRS65_20235 PF00677 Lumazine binding domain LRS65_20240 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LRS65_20240 PF00925 GTP cyclohydrolase II LRS65_20245 PF00885 6,7-dimethyl-8-ribityllumazine synthase LRS65_20255 PF04055 Radical SAM superfamily LRS65_20255 PF06968 Biotin and Thiamin Synthesis associated domain LRS65_20260 PF13847 Methyltransferase domain LRS65_20265 PF08241 Methyltransferase domain LRS65_20265 PF12697 Alpha/beta hydrolase family LRS65_20270 PF00155 Aminotransferase class I and II LRS65_20280 PF00202 Aminotransferase class-III LRS65_20290 PF03553 Na+/H+ antiporter family LRS65_20295 PF02872 5'-nucleotidase, C-terminal domain LRS65_20295 PF00149 Calcineurin-like phosphoesterase LRS65_20305 PF01037 Lrp/AsnC ligand binding domain LRS65_20305 PF13404 AsnC-type helix-turn-helix domain LRS65_20320 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LRS65_20320 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LRS65_20325 PF00202 Aminotransferase class-III LRS65_20330 PF00696 Amino acid kinase family LRS65_20335 PF01960 ArgJ family LRS65_20340 PF01118 Semialdehyde dehydrogenase, NAD binding domain LRS65_20340 PF02774 Semialdehyde dehydrogenase, dimerisation domain LRS65_20350 PF00106 short chain dehydrogenase LRS65_20355 PF00753 Metallo-beta-lactamase superfamily LRS65_20360 PF03807 NADP oxidoreductase coenzyme F420-dependent LRS65_20360 PF14748 Pyrroline-5-carboxylate reductase dimerisation LRS65_20365 PF03313 Serine dehydratase alpha chain LRS65_20370 PF01842 ACT domain LRS65_20370 PF03315 Serine dehydratase beta chain LRS65_20380 PF00753 Metallo-beta-lactamase superfamily LRS65_20380 PF12706 Beta-lactamase superfamily domain LRS65_20395 PF00689 Cation transporting ATPase, C-terminus LRS65_20395 PF00690 Cation transporter/ATPase, N-terminus LRS65_20400 PF02308 MgtC family LRS65_20405 PF00817 impB/mucB/samB family LRS65_20405 PF11799 impB/mucB/samB family C-terminal domain LRS65_20405 PF11798 IMS family HHH motif LRS65_20410 PF01546 Peptidase family M20/M25/M40 LRS65_20410 PF07687 Peptidase dimerisation domain LRS65_20415 PF13302 Acetyltransferase (GNAT) domain LRS65_20430 PF03734 L,D-transpeptidase catalytic domain LRS65_20435 PF11728 Putative aromatic acid exporter C-terminal domain LRS65_20435 PF06081 Aromatic acid exporter family member 1 LRS65_20440 PF00005 ABC transporter LRS65_20445 PF00528 Binding-protein-dependent transport system inner membrane component LRS65_20450 PF00497 Bacterial extracellular solute-binding proteins, family 3 LRS65_20455 PF06491 Disulphide isomerase LRS65_20460 PF11208 Protein of unknown function (DUF2992) LRS65_20465 PF00293 NUDIX domain LRS65_20465 PF09297 NADH pyrophosphatase zinc ribbon domain LRS65_20470 PF04239 Protein of unknown function (DUF421) LRS65_20475 PF01098 Cell cycle protein LRS65_20480 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LRS65_20480 PF02817 e3 binding domain LRS65_20480 PF00364 Biotin-requiring enzyme LRS65_20485 PF02779 Transketolase, pyrimidine binding domain LRS65_20485 PF02780 Transketolase, C-terminal domain LRS65_20490 PF00676 Dehydrogenase E1 component LRS65_20495 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRS65_20495 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LRS65_20500 PF00871 Acetokinase family LRS65_20505 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LRS65_20505 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LRS65_20510 PF01515 Phosphate acetyl/butaryl transferase LRS65_20515 PF02954 Bacterial regulatory protein, Fis family LRS65_20515 PF00989 PAS fold LRS65_20515 PF00158 Sigma-54 interaction domain LRS65_20525 PF03009 Glycerophosphoryl diester phosphodiesterase family LRS65_20530 PF14174 YycC-like protein LRS65_20540 PF00072 Response regulator receiver domain LRS65_20540 PF08769 Sporulation initiation factor Spo0A C terminal LRS65_20545 PF17820 PDZ domain LRS65_20545 PF05580 SpoIVB peptidase S55 LRS65_20550 PF13476 AAA domain LRS65_20555 PF02863 Arginine repressor, C-terminal domain LRS65_20555 PF01316 Arginine repressor, DNA binding domain LRS65_20560 PF01479 S4 domain LRS65_20560 PF01728 FtsJ-like methyltransferase LRS65_20565 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LRS65_20565 PF02779 Transketolase, pyrimidine binding domain LRS65_20565 PF02780 Transketolase, C-terminal domain LRS65_20570 PF00348 Polyprenyl synthetase LRS65_20575 PF02609 Exonuclease VII small subunit LRS65_20580 PF13742 OB-fold nucleic acid binding domain LRS65_20580 PF02601 Exonuclease VII, large subunit LRS65_20585 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LRS65_20585 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LRS65_20590 PF01029 NusB family LRS65_20595 PF03780 Asp23 family, cell envelope-related function LRS65_20600 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LRS65_20600 PF00289 Biotin carboxylase, N-terminal domain LRS65_20600 PF02785 Biotin carboxylase C-terminal domain LRS65_20605 PF00364 Biotin-requiring enzyme LRS65_20615 PF12685 SpoIIIAH-like protein LRS65_20625 PF09581 Stage III sporulation protein AF (Spore_III_AF) LRS65_20630 PF09546 Stage III sporulation protein AE (spore_III_AE) LRS65_20635 PF06686 Stage III sporulation protein AC/AD protein family LRS65_20640 PF06686 Stage III sporulation protein AC/AD protein family LRS65_20645 PF09548 Stage III sporulation protein AB (spore_III_AB) LRS65_20670 PF01132 Elongation factor P (EF-P) OB domain LRS65_20670 PF08207 Elongation factor P (EF-P) KOW-like domain LRS65_20670 PF09285 Elongation factor P, C-terminal LRS65_20675 PF01321 Creatinase/Prolidase N-terminal domain LRS65_20675 PF00557 Metallopeptidase family M24 LRS65_20680 PF01220 Dehydroquinase class II LRS65_20685 PF11085 Conserved membrane protein YqhR LRS65_20690 PF07136 Protein of unknown function (DUF1385) LRS65_20700 PF13419 Haloacid dehalogenase-like hydrolase LRS65_20705 PF02742 Iron dependent repressor, metal binding and dimerisation domain LRS65_20705 PF01325 Iron dependent repressor, N-terminal DNA binding domain LRS65_20730 PF03099 Biotin/lipoate A/B protein ligase family LRS65_20735 PF00581 Rhodanese-like domain LRS65_20745 PF00356 Bacterial regulatory proteins, lacI family LRS65_20745 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LRS65_20755 PF00893 Small Multidrug Resistance protein LRS65_20760 PF00893 Small Multidrug Resistance protein LRS65_20785 PF02347 Glycine cleavage system P-protein LRS65_20790 PF02347 Glycine cleavage system P-protein LRS65_20795 PF08669 Glycine cleavage T-protein C-terminal barrel domain LRS65_20795 PF01571 Aminomethyltransferase folate-binding domain LRS65_20800 PF00271 Helicase conserved C-terminal domain LRS65_20800 PF00176 SNF2 family N-terminal domain LRS65_20805 PF11079 Bacterial protein YqhG of unknown function LRS65_20825 PF14038 YqzE-like protein LRS65_20830 PF01202 Shikimate kinase LRS65_20865 PF00482 Type II secretion system (T2SS), protein F LRS65_20870 PF00437 Type II/IV secretion system protein LRS65_20880 PF11117 Protein of unknown function (DUF2626) LRS65_20920 PF04101 Glycosyltransferase family 28 C-terminal domain LRS65_20920 PF03033 Glycosyltransferase family 28 N-terminal domain LRS65_20925 PF02607 B12 binding domain LRS65_20925 PF00809 Pterin binding enzyme LRS65_20925 PF02574 Homocysteine S-methyltransferase LRS65_20925 PF02965 Vitamin B12 dependent methionine synthase, activation domain LRS65_20925 PF02310 B12 binding domain LRS65_20930 PF02219 Methylenetetrahydrofolate reductase LRS65_20930 PF02574 Homocysteine S-methyltransferase LRS65_20935 PF01053 Cys/Met metabolism PLP-dependent enzyme LRS65_20940 PF01053 Cys/Met metabolism PLP-dependent enzyme LRS65_20950 PF01022 Bacterial regulatory protein, arsR family LRS65_20960 PF00753 Metallo-beta-lactamase superfamily LRS65_20965 PF10958 Protein of unknown function (DUF2759) LRS65_20970 PF00480 ROK family LRS65_20975 PF06014 Bacterial protein of unknown function (DUF910) LRS65_20980 PF01812 5-formyltetrahydrofolate cyclo-ligase family LRS65_20985 PF00471 Ribosomal protein L33 LRS65_20990 PF00483 Nucleotidyl transferase LRS65_20995 PF01895 PhoU domain LRS65_21000 PF00005 ABC transporter LRS65_21005 PF00528 Binding-protein-dependent transport system inner membrane component LRS65_21010 PF00528 Binding-protein-dependent transport system inner membrane component LRS65_21015 PF12849 PBP superfamily domain LRS65_21020 PF00905 Penicillin binding protein transpeptidase domain LRS65_21020 PF03717 Penicillin-binding Protein dimerisation domain LRS65_21025 PF07690 Major Facilitator Superfamily LRS65_21030 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LRS65_21030 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LRS65_21040 PF06691 Protein of unknown function (DUF1189) LRS65_21050 PF04551 GcpE protein LRS65_21055 PF01475 Ferric uptake regulator family LRS65_21060 PF00950 ABC 3 transport family LRS65_21065 PF00005 ABC transporter LRS65_21070 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LRS65_21070 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LRS65_21075 PF11116 Protein of unknown function (DUF2624) LRS65_21080 PF01261 Xylose isomerase-like TIM barrel LRS65_21085 PF00270 DEAD/DEAH box helicase LRS65_21085 PF00271 Helicase conserved C-terminal domain LRS65_21095 PF02401 LytB protein LRS65_21100 PF01784 NIF3 (NGG1p interacting factor 3) LRS65_21105 PF04816 tRNA (adenine(22)-N(1))-methyltransferase LRS65_21110 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LRS65_21115 PF04545 Sigma-70, region 4 LRS65_21115 PF04539 Sigma-70 region 3 LRS65_21115 PF04542 Sigma-70 region 2 LRS65_21115 PF03979 Sigma-70 factor, region 1.1 LRS65_21115 PF00140 Sigma-70 factor, region 1.2 LRS65_21120 PF01807 CHC2 zinc finger LRS65_21120 PF08275 DNA primase catalytic core, N-terminal domain LRS65_21120 PF10410 DnaB-helicase binding domain of primase LRS65_21130 PF03618 Kinase/pyrophosphorylase LRS65_21135 PF00571 CBS domain LRS65_21135 PF08279 HTH domain LRS65_21140 PF02565 Recombination protein O C terminal LRS65_21140 PF11967 Recombination protein O N terminal LRS65_21150 PF07650 KH domain LRS65_21150 PF01926 50S ribosome-binding GTPase LRS65_21155 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LRS65_21160 PF01219 Prokaryotic diacylglycerol kinase LRS65_21165 PF02130 Uncharacterized protein family UPF0054 LRS65_21170 PF01966 HD domain LRS65_21170 PF07698 7TM receptor with intracellular HD hydrolase LRS65_21170 PF07697 7TM-HD extracellular LRS65_21175 PF02562 PhoH-like protein LRS65_21180 PF06898 Putative stage IV sporulation protein YqfD LRS65_21185 PF07873 YabP family LRS65_21190 PF09424 Yqey-like protein LRS65_21195 PF01165 Ribosomal protein S21 LRS65_21200 PF04055 Radical SAM superfamily LRS65_21200 PF01938 TRAM domain LRS65_21200 PF00919 Uncharacterized protein family UPF0004 LRS65_21205 PF04452 RNA methyltransferase LRS65_21215 PF00226 DnaJ domain LRS65_21215 PF01556 DnaJ C terminal domain LRS65_21215 PF00684 DnaJ central domain LRS65_21225 PF01025 GrpE LRS65_21230 PF01628 HrcA protein C terminal domain LRS65_21235 PF06969 HemN C-terminal domain LRS65_21235 PF04055 Radical SAM superfamily LRS65_21240 PF01638 HxlR-like helix-turn-helix LRS65_21245 PF00679 Elongation factor G C-terminus LRS65_21245 PF00009 Elongation factor Tu GTP binding domain LRS65_21245 PF03144 Elongation factor Tu domain 2 LRS65_21245 PF06421 GTP-binding protein LepA C-terminus LRS65_21255 PF03418 Germination protease LRS65_21260 PF01649 Ribosomal protein S20 LRS65_21265 PF06144 DNA polymerase III, delta subunit LRS65_21270 PF14141 YqzM-like protein LRS65_21275 PF00753 Metallo-beta-lactamase superfamily LRS65_21275 PF13567 Domain of unknown function (DUF4131) LRS65_21275 PF03772 Competence protein LRS65_21280 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LRS65_21285 PF10531 SLBB domain LRS65_21290 PF03807 NADP oxidoreductase coenzyme F420-dependent LRS65_21290 PF14748 Pyrroline-5-carboxylate reductase dimerisation LRS65_21295 PF13649 Methyltransferase domain LRS65_21305 PF01966 HD domain LRS65_21310 PF01467 Cytidylyltransferase-like LRS65_21315 PF01985 CRS1 / YhbY (CRM) domain LRS65_21320 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LRS65_21320 PF01488 Shikimate / quinate 5-dehydrogenase LRS65_21320 PF08501 Shikimate dehydrogenase substrate binding domain LRS65_21325 PF01926 50S ribosome-binding GTPase LRS65_21340 PF02666 Phosphatidylserine decarboxylase LRS65_21345 PF04542 Sigma-70 region 2 LRS65_21345 PF04545 Sigma-70, region 4 LRS65_21360 PF00471 Ribosomal protein L33 LRS65_21365 PF00881 Nitroreductase family LRS65_21370 PF04607 Region found in RelA / SpoT proteins LRS65_21380 PF00245 Alkaline phosphatase LRS65_21385 PF00583 Acetyltransferase (GNAT) family LRS65_21390 PF08386 TAP-like protein LRS65_21390 PF00561 alpha/beta hydrolase fold LRS65_21430 PF13860 FlgD Ig-like domain LRS65_21430 PF00082 Subtilase family LRS65_21430 PF02225 PA domain LRS65_21430 PF05922 Peptidase inhibitor I9 LRS65_21435 PF00351 Biopterin-dependent aromatic amino acid hydroxylase LRS65_21445 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LRS65_21450 PF07681 DoxX LRS65_21480 PF00005 ABC transporter LRS65_21485 PF01032 FecCD transport family LRS65_21490 PF01497 Periplasmic binding protein LRS65_21495 PF14143 YrhC-like protein LRS65_21500 PF00171 Aldehyde dehydrogenase family LRS65_21500 PF00465 Iron-containing alcohol dehydrogenase LRS65_21505 PF01053 Cys/Met metabolism PLP-dependent enzyme LRS65_21510 PF00291 Pyridoxal-phosphate dependent enzyme LRS65_21515 PF01048 Phosphorylase superfamily LRS65_21520 PF08241 Methyltransferase domain LRS65_21535 PF00905 Penicillin binding protein transpeptidase domain LRS65_21535 PF03717 Penicillin-binding Protein dimerisation domain LRS65_21545 PF01272 Transcription elongation factor, GreA/GreB, C-term LRS65_21545 PF03449 Transcription elongation factor, N-terminal LRS65_21550 PF00485 Phosphoribulokinase / Uridine kinase family LRS65_21555 PF01136 Peptidase family U32 LRS65_21555 PF16325 Peptidase family U32 C-terminal domain LRS65_21560 PF01136 Peptidase family U32 LRS65_21565 PF01596 O-methyltransferase LRS65_21570 PF02618 YceG-like family LRS65_21575 PF06949 Protein of unknown function (DUF1292) LRS65_21580 PF03652 Holliday junction resolvase LRS65_21585 PF06135 IreB regulatory phosphoprotein LRS65_21590 PF02272 DHHA1 domain LRS65_21590 PF01411 tRNA synthetases class II (A) LRS65_21590 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LRS65_21600 PF01594 AI-2E family transporter LRS65_21620 PF13538 UvrD-like helicase C-terminal domain LRS65_21620 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain LRS65_21620 PF14490 Helix-hairpin-helix containing domain LRS65_21635 PF00266 Aminotransferase class-V LRS65_21640 PF02082 Transcriptional regulator LRS65_21645 PF16193 AAA C-terminal domain LRS65_21645 PF12002 MgsA AAA+ ATPase C terminal LRS65_21645 PF05496 Holliday junction DNA helicase RuvB P-loop domain LRS65_21655 PF00899 ThiF family LRS65_21660 PF02938 GAD domain LRS65_21660 PF01336 OB-fold nucleic acid binding domain LRS65_21660 PF00152 tRNA synthetases class II (D, K and N) LRS65_21665 PF03129 Anticodon binding domain LRS65_21665 PF13393 Histidyl-tRNA synthetase LRS65_21675 PF02580 D-Tyr-tRNA(Tyr) deacylase LRS65_21680 PF04607 Region found in RelA / SpoT proteins LRS65_21680 PF02824 TGS domain LRS65_21680 PF13291 ACT domain LRS65_21685 PF00156 Phosphoribosyl transferase domain LRS65_21690 PF02272 DHHA1 domain LRS65_21690 PF17768 RecJ OB domain LRS65_21690 PF10141 Single-strand DNA-specific exonuclease, C terminal domain LRS65_21690 PF01368 DHH family LRS65_21695 PF01545 Cation efflux family LRS65_21695 PF16916 Dimerisation domain of Zinc Transporter LRS65_21700 PF07549 SecD/SecF GG Motif LRS65_21700 PF02355 Protein export membrane protein LRS65_21705 PF13797 Post-transcriptional regulator LRS65_21710 PF01943 Polysaccharide biosynthesis protein LRS65_21710 PF14667 Polysaccharide biosynthesis C-terminal domain LRS65_21715 PF04239 Protein of unknown function (DUF421) LRS65_21725 PF02699 Preprotein translocase subunit LRS65_21730 PF01702 Queuine tRNA-ribosyltransferase LRS65_21735 PF02547 Queuosine biosynthesis protein LRS65_21740 PF11146 Protein of unknown function (DUF2905) LRS65_21745 PF17864 RuvB AAA lid domain LRS65_21745 PF05491 RuvB C-terminal winged helix domain LRS65_21745 PF05496 Holliday junction DNA helicase RuvB P-loop domain LRS65_21750 PF07499 RuvA, C-terminal domain LRS65_21750 PF01330 RuvA N terminal domain LRS65_21755 PF01497 Periplasmic binding protein LRS65_21775 PF01476 LysM domain LRS65_21780 PF02445 Quinolinate synthetase A protein LRS65_21785 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LRS65_21785 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LRS65_21790 PF02910 Fumarate reductase flavoprotein C-term LRS65_21790 PF00890 FAD binding domain LRS65_21795 PF00266 Aminotransferase class-V LRS65_21800 PF08279 HTH domain LRS65_21800 PF02829 3H domain LRS65_21805 PF03475 3-alpha domain LRS65_21805 PF03473 MOSC domain LRS65_21810 PF00800 Prephenate dehydratase LRS65_21810 PF01842 ACT domain LRS65_21815 PF02687 FtsX-like permease family LRS65_21820 PF02687 FtsX-like permease family LRS65_21825 PF00005 ABC transporter LRS65_21830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_21835 PF00072 Response regulator receiver domain LRS65_21835 PF00486 Transcriptional regulatory protein, C terminal LRS65_21840 PF01926 50S ribosome-binding GTPase LRS65_21840 PF01018 GTP1/OBG LRS65_21840 PF09269 Domain of unknown function (DUF1967) LRS65_21845 PF14682 Sporulation initiation phospho-transferase B, C-terminal LRS65_21845 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LRS65_21850 PF01016 Ribosomal L27 protein LRS65_21855 PF04327 Cysteine protease Prp LRS65_21860 PF00829 Ribosomal prokaryotic L21 protein LRS65_21865 PF00575 S1 RNA binding domain LRS65_21865 PF10150 Ribonuclease E/G family LRS65_21870 PF02163 Peptidase family M50 LRS65_21875 PF01551 Peptidase family M23 LRS65_21880 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LRS65_21885 PF03775 Septum formation inhibitor MinC, C-terminal domain LRS65_21895 PF04085 rod shape-determining protein MreC LRS65_21905 PF04002 RadC-like JAB domain LRS65_21910 PF02545 Maf-like protein LRS65_21920 PF02875 Mur ligase family, glutamate ligase domain LRS65_21920 PF08245 Mur ligase middle domain LRS65_21925 PF10458 Valyl tRNA synthetase tRNA binding arm LRS65_21925 PF08264 Anticodon-binding domain of tRNA LRS65_21925 PF00133 tRNA synthetases class I (I, L, M and V) LRS65_21935 PF01476 LysM domain LRS65_21940 PF00202 Aminotransferase class-III LRS65_21945 PF00490 Delta-aminolevulinic acid dehydratase LRS65_21950 PF02602 Uroporphyrinogen-III synthase HemD LRS65_21955 PF03900 Porphobilinogen deaminase, C-terminal domain LRS65_21955 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LRS65_21960 PF01578 Cytochrome C assembly protein LRS65_21965 PF01488 Shikimate / quinate 5-dehydrogenase LRS65_21965 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LRS65_21965 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LRS65_21970 PF01047 MarR family LRS65_21975 PF02566 OsmC-like protein LRS65_21980 PF01926 50S ribosome-binding GTPase LRS65_21985 PF00004 ATPase family associated with various cellular activities (AAA) LRS65_21985 PF05362 Lon protease (S16) C-terminal proteolytic domain LRS65_21985 PF02190 ATP-dependent protease La (LON) substrate-binding domain LRS65_21990 PF00004 ATPase family associated with various cellular activities (AAA) LRS65_21990 PF05362 Lon protease (S16) C-terminal proteolytic domain LRS65_21995 PF07724 AAA domain (Cdc48 subfamily) LRS65_21995 PF10431 C-terminal, D2-small domain, of ClpB protein LRS65_21995 PF06689 ClpX C4-type zinc finger LRS65_22000 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LRS65_22000 PF05697 Bacterial trigger factor protein (TF) LRS65_22000 PF05698 Bacterial trigger factor protein (TF) C-terminus LRS65_22015 PF08000 Bacterial PH domain LRS65_22015 PF11724 YvbH-like oligomerisation region LRS65_22035 PF12850 Calcineurin-like phosphoesterase superfamily domain LRS65_22040 PF01725 Ham1 family LRS65_22045 PF01138 3' exoribonuclease family, domain 1 LRS65_22045 PF03725 3' exoribonuclease family, domain 2 LRS65_22050 PF10646 Sporulation and spore germination LRS65_22055 PF01177 Asp/Glu/Hydantoin racemase LRS65_22060 PF07690 Major Facilitator Superfamily LRS65_22070 PF00440 Bacterial regulatory proteins, tetR family LRS65_22080 PF00196 Bacterial regulatory proteins, luxR family LRS65_22085 PF00860 Permease family LRS65_22090 PF07969 Amidohydrolase family LRS65_22095 PF04024 PspC domain LRS65_22100 PF01381 Helix-turn-helix LRS65_22100 PF07883 Cupin domain LRS65_22105 PF13536 Putative multidrug resistance efflux transporter LRS65_22110 PF00230 Major intrinsic protein LRS65_22115 PF02082 Transcriptional regulator LRS65_22125 PF00005 ABC transporter LRS65_22125 PF13732 Domain of unknown function (DUF4162) LRS65_22130 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) LRS65_22135 PF13677 Membrane MotB of proton-channel complex MotA/MotB LRS65_22135 PF00691 OmpA family LRS65_22140 PF01618 MotA/TolQ/ExbB proton channel family LRS65_22145 PF02557 D-alanyl-D-alanine carboxypeptidase LRS65_22150 PF03061 Thioesterase superfamily LRS65_22155 PF13183 4Fe-4S dicluster domain LRS65_22155 PF13085 2Fe-2S iron-sulfur cluster binding domain LRS65_22160 PF00890 FAD binding domain LRS65_22160 PF02910 Fumarate reductase flavoprotein C-term LRS65_22165 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LRS65_22170 PF10702 Protein of unknown function (DUF2507) LRS65_22175 PF01541 GIY-YIG catalytic domain LRS65_22175 PF08459 UvrC Helix-hairpin-helix N-terminal LRS65_22175 PF02151 UvrB/uvrC motif LRS65_22180 PF00085 Thioredoxin LRS65_22185 PF01012 Electron transfer flavoprotein domain LRS65_22185 PF00766 Electron transfer flavoprotein FAD-binding domain LRS65_22190 PF01012 Electron transfer flavoprotein domain LRS65_22195 PF00378 Enoyl-CoA hydratase/isomerase LRS65_22200 PF08359 YsiA-like protein, C-terminal region LRS65_22200 PF00440 Bacterial regulatory proteins, tetR family LRS65_22205 PF00501 AMP-binding enzyme LRS65_22205 PF13193 AMP-binding enzyme C-terminal domain LRS65_22215 PF01497 Periplasmic binding protein LRS65_22220 PF01032 FecCD transport family LRS65_22230 PF05163 DinB family LRS65_22255 PF00005 ABC transporter LRS65_22260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_22260 PF00512 His Kinase A (phospho-acceptor) domain LRS65_22265 PF00072 Response regulator receiver domain LRS65_22265 PF00486 Transcriptional regulatory protein, C terminal LRS65_22275 PF09962 Uncharacterized conserved protein (DUF2196) LRS65_22280 PF10672 S-adenosylmethionine-dependent methyltransferase LRS65_22280 PF17785 PUA-like domain LRS65_22285 PF03992 Antibiotic biosynthesis monooxygenase LRS65_22290 PF04203 Sortase domain LRS65_22295 PF00005 ABC transporter LRS65_22300 PF01032 FecCD transport family LRS65_22305 PF01497 Periplasmic binding protein LRS65_22310 PF05031 Iron Transport-associated domain LRS65_22320 PF05031 Iron Transport-associated domain LRS65_22325 PF05525 Branched-chain amino acid transport protein LRS65_22330 PF00849 RNA pseudouridylate synthase LRS65_22330 PF01479 S4 domain LRS65_22335 PF00488 MutS domain V LRS65_22335 PF01713 Smr domain LRS65_22340 PF14791 DNA polymerase beta thumb LRS65_22340 PF14716 Helix-hairpin-helix domain LRS65_22340 PF02811 PHP domain LRS65_22345 PF02674 Colicin V production protein LRS65_22350 PF05164 Cell division protein ZapA LRS65_22355 PF01351 Ribonuclease HII LRS65_22355 PF11858 Domain of unknown function (DUF3378) LRS65_22365 PF00106 short chain dehydrogenase LRS65_22370 PF01336 OB-fold nucleic acid binding domain LRS65_22370 PF00152 tRNA synthetases class II (D, K and N) LRS65_22380 PF07690 Major Facilitator Superfamily LRS65_22385 PF02627 Carboxymuconolactone decarboxylase family LRS65_22390 PF03483 B3/4 domain LRS65_22390 PF03484 tRNA synthetase B5 domain LRS65_22390 PF01588 Putative tRNA binding domain LRS65_22390 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LRS65_22390 PF03147 Ferredoxin-fold anticodon binding domain LRS65_22395 PF01409 tRNA synthetases class II core domain (F) LRS65_22395 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LRS65_22400 PF00588 SpoU rRNA Methylase family LRS65_22400 PF08032 RNA 2'-O ribose methyltransferase substrate binding LRS65_22405 PF14098 Small, acid-soluble spore protein I LRS65_22410 PF01966 HD domain LRS65_22430 PF07690 Major Facilitator Superfamily LRS65_22440 PF00440 Bacterial regulatory proteins, tetR family LRS65_22440 PF16859 Tetracyclin repressor-like, C-terminal domain LRS65_22445 PF05343 M42 glutamyl aminopeptidase LRS65_22455 PF00453 Ribosomal protein L20 LRS65_22460 PF01632 Ribosomal protein L35 LRS65_22465 PF05198 Translation initiation factor IF-3, N-terminal domain LRS65_22465 PF00707 Translation initiation factor IF-3, C-terminal domain LRS65_22470 PF02824 TGS domain LRS65_22470 PF03129 Anticodon binding domain LRS65_22470 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LRS65_22470 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LRS65_22475 PF08812 YtxC-like family LRS65_22480 PF13783 Domain of unknown function (DUF4177) LRS65_22485 PF07319 Primosomal protein DnaI N-terminus LRS65_22485 PF01695 IstB-like ATP binding protein LRS65_22490 PF07261 Replication initiation and membrane attachment LRS65_22495 PF03477 ATP cone domain LRS65_22500 PF02675 S-adenosylmethionine decarboxylase LRS65_22505 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LRS65_22505 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LRS65_22510 PF01121 Dephospho-CoA kinase LRS65_22515 PF02659 Putative manganese efflux pump LRS65_22520 PF06827 Zinc finger found in FPG and IleRS LRS65_22520 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LRS65_22520 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LRS65_22525 PF00476 DNA polymerase family A LRS65_22525 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LRS65_22525 PF01367 5'-3' exonuclease, C-terminal SAM fold LRS65_22530 PF00989 PAS fold LRS65_22530 PF00512 His Kinase A (phospho-acceptor) domain LRS65_22530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_22530 PF16736 Single Cache-like LRS65_22535 PF00486 Transcriptional regulatory protein, C terminal LRS65_22535 PF00072 Response regulator receiver domain LRS65_22550 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LRS65_22550 PF00056 lactate/malate dehydrogenase, NAD binding domain LRS65_22555 PF00180 Isocitrate/isopropylmalate dehydrogenase LRS65_22560 PF00285 Citrate synthase, C-terminal domain LRS65_22565 PF04284 Protein of unknown function (DUF441) LRS65_22570 PF01594 AI-2E family transporter LRS65_22575 PF04186 FxsA cytoplasmic membrane protein LRS65_22580 PF02887 Pyruvate kinase, alpha/beta domain LRS65_22580 PF00224 Pyruvate kinase, barrel domain LRS65_22580 PF00391 PEP-utilising enzyme, mobile domain LRS65_22585 PF00365 Phosphofructokinase LRS65_22590 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LRS65_22595 PF17848 Acetyl-coA carboxylase zinc finger domain LRS65_22595 PF01039 Carboxyl transferase domain LRS65_22600 PF00392 Bacterial regulatory proteins, gntR family LRS65_22605 PF00390 Malic enzyme, N-terminal domain LRS65_22605 PF03949 Malic enzyme, NAD binding domain LRS65_22610 PF14579 Helix-hairpin-helix motif LRS65_22610 PF07733 Bacterial DNA polymerase III alpha NTPase domain LRS65_22610 PF02811 PHP domain LRS65_22610 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LRS65_22610 PF01336 OB-fold nucleic acid binding domain LRS65_22615 PF14034 Sporulation protein YtrH LRS65_22625 PF02272 DHHA1 domain LRS65_22625 PF01368 DHH family LRS65_22630 PF14007 YtpI-like protein LRS65_22640 PF07085 DRTGG domain LRS65_22640 PF00392 Bacterial regulatory proteins, gntR family LRS65_22640 PF00571 CBS domain LRS65_22640 PF03061 Thioesterase superfamily LRS65_22655 PF01321 Creatinase/Prolidase N-terminal domain LRS65_22655 PF00557 Metallopeptidase family M24 LRS65_22690 PF12746 GNAT acetyltransferase LRS65_22695 PF07883 Cupin domain LRS65_22705 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LRS65_22705 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LRS65_22715 PF00582 Universal stress protein family LRS65_22735 PF00206 Lyase LRS65_22735 PF14698 Argininosuccinate lyase C-terminal LRS65_22740 PF00764 Arginosuccinate synthase LRS65_22755 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LRS65_22755 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LRS65_22760 PF12787 EcsC protein family LRS65_22775 PF00871 Acetokinase family LRS65_22780 PF02384 N-6 DNA Methylase LRS65_22785 PF08534 Redoxin LRS65_22790 PF09579 Sporulation protein YtfJ (Spore_YtfJ) LRS65_22800 PF01513 ATP-NAD kinase LRS65_22805 PF07969 Amidohydrolase family LRS65_22815 PF00501 AMP-binding enzyme LRS65_22815 PF13193 AMP-binding enzyme C-terminal domain LRS65_22820 PF00269 Small, acid-soluble spore proteins, alpha/beta type LRS65_22825 PF02568 Thiamine biosynthesis protein (ThiI) LRS65_22825 PF02926 THUMP domain LRS65_22830 PF00266 Aminotransferase class-V LRS65_22835 PF06160 Septation ring formation regulator, EzrA LRS65_22840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRS65_22840 PF03466 LysR substrate binding domain LRS65_22845 PF00892 EamA-like transporter family LRS65_22850 PF00440 Bacterial regulatory proteins, tetR family LRS65_22855 PF13185 GAF domain LRS65_22860 PF01053 Cys/Met metabolism PLP-dependent enzyme LRS65_22865 PF00163 Ribosomal protein S4/S9 N-terminal domain LRS65_22865 PF01479 S4 domain LRS65_22880 PF01479 S4 domain LRS65_22880 PF00579 tRNA synthetases class I (W and Y) LRS65_22890 PF08281 Sigma-70, region 4 LRS65_22890 PF04542 Sigma-70 region 2 LRS65_22900 PF12464 Maltose acetyltransferase LRS65_22900 PF14602 Hexapeptide repeat of succinyl-transferase LRS65_22905 PF13193 AMP-binding enzyme C-terminal domain LRS65_22905 PF00501 AMP-binding enzyme LRS65_22910 PF00583 Acetyltransferase (GNAT) family LRS65_22915 PF00571 CBS domain LRS65_22920 PF00850 Histone deacetylase domain LRS65_22935 PF00072 Response regulator receiver domain LRS65_22935 PF00486 Transcriptional regulatory protein, C terminal LRS65_22940 PF16736 Single Cache-like LRS65_22940 PF00512 His Kinase A (phospho-acceptor) domain LRS65_22940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_22940 PF00989 PAS fold LRS65_22945 PF12796 Ankyrin repeats (3 copies) LRS65_22950 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LRS65_22955 PF01741 Large-conductance mechanosensitive channel, MscL LRS65_22980 PF00356 Bacterial regulatory proteins, lacI family LRS65_22985 PF01817 Chorismate mutase type II LRS65_22985 PF00793 DAHP synthetase I family LRS65_22990 PF07537 CamS sex pheromone cAM373 precursor LRS65_22995 PF11009 Protein of unknown function (DUF2847) LRS65_23005 PF02073 Thermophilic metalloprotease (M29) LRS65_23025 PF13302 Acetyltransferase (GNAT) domain LRS65_23030 PF01225 Mur ligase family, catalytic domain LRS65_23030 PF02875 Mur ligase family, glutamate ligase domain LRS65_23030 PF08245 Mur ligase middle domain LRS65_23040 PF01580 FtsK/SpoIIIE family LRS65_23040 PF09397 Ftsk gamma domain LRS65_23040 PF17854 FtsK alpha domain LRS65_23045 PF01520 N-acetylmuramoyl-L-alanine amidase LRS65_23045 PF01476 LysM domain LRS65_23055 PF14794 Domain of unknown function (DUF4479) LRS65_23055 PF01588 Putative tRNA binding domain LRS65_23060 PF07285 Protein of unknown function (DUF1444) LRS65_23065 PF00085 Thioredoxin LRS65_23070 PF01931 Protein of unknown function DUF84 LRS65_23075 PF05343 M42 glutamyl aminopeptidase LRS65_23085 PF00753 Metallo-beta-lactamase superfamily LRS65_23090 PF02390 Putative methyltransferase LRS65_23095 PF14165 YtzH-like protein LRS65_23100 PF01636 Phosphotransferase enzyme family LRS65_23105 PF17999 Pullulanase N1-terminal domain LRS65_23105 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LRS65_23105 PF00128 Alpha amylase, catalytic domain LRS65_23110 PF02834 LigT like Phosphoesterase LRS65_23115 PF01546 Peptidase family M20/M25/M40 LRS65_23120 PF08220 DeoR-like helix-turn-helix domain LRS65_23125 PF00849 RNA pseudouridylate synthase LRS65_23125 PF01479 S4 domain LRS65_23130 PF14667 Polysaccharide biosynthesis C-terminal domain LRS65_23130 PF01943 Polysaccharide biosynthesis protein LRS65_23140 PF07690 Major Facilitator Superfamily LRS65_23145 PF01022 Bacterial regulatory protein, arsR family LRS65_23150 PF08327 Activator of Hsp90 ATPase homolog 1-like protein LRS65_23160 PF10957 Sporulation protein Cse60 LRS65_23170 PF02559 CarD-like/TRCF domain LRS65_23180 PF06800 Sugar transport protein LRS65_23195 PF02391 MoaE protein LRS65_23200 PF03205 Molybdopterin guanine dinucleotide synthesis protein B LRS65_23205 PF03453 MoeA N-terminal region (domain I and II) LRS65_23205 PF00994 Probable molybdopterin binding domain LRS65_23205 PF03454 MoeA C-terminal region (domain IV) LRS65_23210 PF01967 MoaC family LRS65_23215 PF00899 ThiF family LRS65_23220 PF04055 Radical SAM superfamily LRS65_23220 PF06463 Molybdenum Cofactor Synthesis C LRS65_23240 PF00581 Rhodanese-like domain LRS65_23250 PF00561 alpha/beta hydrolase fold LRS65_23255 PF03323 Bacillus/Clostridium GerA spore germination protein LRS65_23260 PF03845 Spore germination protein LRS65_23285 PF08264 Anticodon-binding domain of tRNA LRS65_23285 PF00133 tRNA synthetases class I (I, L, M and V) LRS65_23285 PF13603 Leucyl-tRNA synthetase, Domain 2 LRS65_23285 PF09334 tRNA synthetases class I (M) LRS65_23290 PF07690 Major Facilitator Superfamily LRS65_23295 PF00999 Sodium/hydrogen exchanger family LRS65_23300 PF02080 TrkA-C domain LRS65_23305 PF00589 Phage integrase family LRS65_23315 PF00005 ABC transporter LRS65_23320 PF04235 Protein of unknown function (DUF418) LRS65_23320 PF07786 Protein of unknown function (DUF1624) LRS65_23330 PF10732 Protein of unknown function (DUF2524) LRS65_23335 PF04055 Radical SAM superfamily LRS65_23335 PF16199 Radical_SAM C-terminal domain LRS65_23340 PF06962 Putative rRNA methylase LRS65_23345 PF01177 Asp/Glu/Hydantoin racemase LRS65_23360 PF10776 Protein of unknown function (DUF2600) LRS65_23365 PF12146 Serine aminopeptidase, S33 LRS65_23370 PF00132 Bacterial transferase hexapeptide (six repeats) LRS65_23375 PF01569 PAP2 superfamily LRS65_23380 PF13439 Glycosyltransferase Family 4 LRS65_23380 PF00534 Glycosyl transferases group 1 LRS65_23385 PF12804 MobA-like NTP transferase domain LRS65_23390 PF00994 Probable molybdopterin binding domain LRS65_23405 PF02773 S-adenosylmethionine synthetase, C-terminal domain LRS65_23405 PF00438 S-adenosylmethionine synthetase, N-terminal domain LRS65_23405 PF02772 S-adenosylmethionine synthetase, central domain LRS65_23410 PF01293 Phosphoenolpyruvate carboxykinase LRS65_23445 PF13188 PAS domain LRS65_23445 PF00989 PAS fold LRS65_23445 PF00512 His Kinase A (phospho-acceptor) domain LRS65_23445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_23445 PF13426 PAS domain LRS65_23450 PF00512 His Kinase A (phospho-acceptor) domain LRS65_23450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_23450 PF02743 Cache domain LRS65_23460 PF00561 alpha/beta hydrolase fold LRS65_23460 PF08386 TAP-like protein LRS65_23465 PF00884 Sulfatase LRS65_23495 PF00005 ABC transporter LRS65_23500 PF00528 Binding-protein-dependent transport system inner membrane component LRS65_23515 PF13419 Haloacid dehalogenase-like hydrolase LRS65_23525 PF00293 NUDIX domain LRS65_23555 PF02664 S-Ribosylhomocysteinase (LuxS) LRS65_23560 PF01809 Putative membrane protein insertion efficiency factor LRS65_23565 PF00484 Carbonic anhydrase LRS65_23570 PF01654 Cytochrome bd terminal oxidase subunit I LRS65_23575 PF02322 Cytochrome bd terminal oxidase subunit II LRS65_23580 PF10676 Spore germination protein gerPA/gerPF LRS65_23590 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LRS65_23590 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LRS65_23610 PF04012 PspA/IM30 family LRS65_23625 PF07664 Ferrous iron transport protein B C terminus LRS65_23625 PF02421 Ferrous iron transport protein B LRS65_23625 PF17910 FeoB cytosolic helical domain LRS65_23625 PF07670 Nucleoside recognition LRS65_23635 PF09515 Thiamine transporter protein (Thia_YuaJ) LRS65_23640 PF00672 HAMP domain LRS65_23640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_23640 PF00512 His Kinase A (phospho-acceptor) domain LRS65_23645 PF00486 Transcriptional regulatory protein, C terminal LRS65_23645 PF00072 Response regulator receiver domain LRS65_23670 PF00156 Phosphoribosyl transferase domain LRS65_23675 PF00781 Diacylglycerol kinase catalytic domain LRS65_23695 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LRS65_23715 PF02687 FtsX-like permease family LRS65_23720 PF00005 ABC transporter LRS65_23735 PF09335 SNARE associated Golgi protein LRS65_23740 PF00398 Ribosomal RNA adenine dimethylase LRS65_23745 PF02687 FtsX-like permease family LRS65_23750 PF00005 ABC transporter LRS65_23755 PF12833 Helix-turn-helix domain LRS65_23755 PF06445 GyrI-like small molecule binding domain LRS65_23765 PF07853 Protein of unknown function (DUF1648) LRS65_23765 PF13630 SdpI/YhfL protein family LRS65_23770 PF01022 Bacterial regulatory protein, arsR family LRS65_23775 PF00072 Response regulator receiver domain LRS65_23775 PF00486 Transcriptional regulatory protein, C terminal LRS65_23780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_23785 PF02687 FtsX-like permease family LRS65_23790 PF02687 FtsX-like permease family LRS65_23795 PF00005 ABC transporter LRS65_23800 PF02687 FtsX-like permease family LRS65_23810 PF13977 BetI-type transcriptional repressor, C-terminal LRS65_23810 PF00440 Bacterial regulatory proteins, tetR family LRS65_23820 PF02447 GntP family permease LRS65_23825 PF00392 Bacterial regulatory proteins, gntR family LRS65_23825 PF07702 UTRA domain LRS65_23835 PF07071 KDGP aldolase LRS65_23840 PF03841 L-seryl-tRNA selenium transferase LRS65_23845 PF01979 Amidohydrolase family LRS65_23855 PF00512 His Kinase A (phospho-acceptor) domain LRS65_23855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_23860 PF00486 Transcriptional regulatory protein, C terminal LRS65_23860 PF00072 Response regulator receiver domain LRS65_23865 PF13378 Enolase C-terminal domain-like LRS65_23865 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LRS65_23870 PF00501 AMP-binding enzyme LRS65_23870 PF13193 AMP-binding enzyme C-terminal domain LRS65_23875 PF00378 Enoyl-CoA hydratase/isomerase LRS65_23880 PF00561 alpha/beta hydrolase fold LRS65_23885 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LRS65_23885 PF16582 Middle domain of thiamine pyrophosphate LRS65_23885 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LRS65_23890 PF00425 chorismate binding enzyme LRS65_23895 PF01040 UbiA prenyltransferase family LRS65_23900 PF01258 Prokaryotic dksA/traR C4-type zinc finger LRS65_23905 PF00313 'Cold-shock' DNA-binding domain LRS65_23925 PF00343 Carbohydrate phosphorylase LRS65_23930 PF00534 Glycosyl transferases group 1 LRS65_23930 PF08323 Starch synthase catalytic domain LRS65_23935 PF00483 Nucleotidyl transferase LRS65_23940 PF00483 Nucleotidyl transferase LRS65_23945 PF00128 Alpha amylase, catalytic domain LRS65_23945 PF02806 Alpha amylase, C-terminal all-beta domain LRS65_23945 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LRS65_23955 PF05922 Peptidase inhibitor I9 LRS65_23955 PF00082 Subtilase family LRS65_23955 PF02225 PA domain LRS65_23955 PF13860 FlgD Ig-like domain LRS65_23960 PF00056 lactate/malate dehydrogenase, NAD binding domain LRS65_23960 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LRS65_24055 PF05698 Bacterial trigger factor protein (TF) C-terminus LRS65_24055 PF05697 Bacterial trigger factor protein (TF) LRS65_24090 PF02308 MgtC family LRS65_24095 PF07885 Ion channel LRS65_24095 PF02254 TrkA-N domain LRS65_24100 PF08868 YugN-like family LRS65_24105 PF00342 Phosphoglucose isomerase LRS65_24110 PF04070 Domain of unknown function (DUF378) LRS65_24115 PF00575 S1 RNA binding domain LRS65_24120 PF00155 Aminotransferase class I and II LRS65_24125 PF01037 Lrp/AsnC ligand binding domain LRS65_24130 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LRS65_24130 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LRS65_24135 PF00561 alpha/beta hydrolase fold LRS65_24135 PF08386 TAP-like protein LRS65_24145 PF00155 Aminotransferase class I and II LRS65_24160 PF08810 Kinase associated protein B LRS65_24165 PF00929 Exonuclease LRS65_24170 PF03600 Citrate transporter LRS65_24185 PF03129 Anticodon binding domain LRS65_24185 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LRS65_24190 PF03061 Thioesterase superfamily LRS65_24200 PF02632 BioY family LRS65_24205 PF00483 Nucleotidyl transferase LRS65_24210 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LRS65_24210 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LRS65_24210 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LRS65_24210 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LRS65_24215 PF10372 Bacterial membrane-spanning protein N-terminus LRS65_24215 PF02457 DisA bacterial checkpoint controller nucleotide-binding LRS65_24220 PF00883 Cytosol aminopeptidase family, catalytic domain LRS65_24220 PF02789 Cytosol aminopeptidase family, N-terminal domain LRS65_24225 PF06725 3D domain LRS65_24235 PF00293 NUDIX domain LRS65_24235 PF09297 NADH pyrophosphatase zinc ribbon domain LRS65_24240 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRS65_24245 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRS65_24255 PF06445 GyrI-like small molecule binding domain LRS65_24270 PF04463 Protein of unknown function (DUF523) LRS65_24280 PF01596 O-methyltransferase LRS65_24290 PF01521 Iron-sulphur cluster biosynthesis LRS65_24295 PF01678 Diaminopimelate epimerase LRS65_24300 PF07293 Protein of unknown function (DUF1450) LRS65_24305 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRS65_24315 PF03412 Peptidase C39 family LRS65_24315 PF00664 ABC transporter transmembrane region LRS65_24315 PF00005 ABC transporter LRS65_24320 PF03649 Uncharacterised protein family (UPF0014) LRS65_24325 PF08274 PhnA Zinc-Ribbon LRS65_24325 PF03831 PhnA domain LRS65_24370 PF13427 Domain of unknown function (DUF4111) LRS65_24370 PF01909 Nucleotidyltransferase domain LRS65_24375 PF07315 Protein of unknown function (DUF1462) LRS65_24380 PF01106 NifU-like domain LRS65_24395 PF04608 Phosphatidylglycerophosphatase A LRS65_24415 PF15608 PELOTA RNA binding domain LRS65_24415 PF11202 Phosphoribosyl transferase (PRTase) LRS65_24425 PF02525 Flavodoxin-like fold LRS65_24435 PF13344 Haloacid dehalogenase-like hydrolase LRS65_24445 PF01934 Protein of unknown function DUF86 LRS65_24450 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded LRS65_24470 PF06265 Protein of unknown function (DUF1027) LRS65_24475 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) LRS65_24480 PF13411 MerR HTH family regulatory protein LRS65_24480 PF07739 TipAS antibiotic-recognition domain LRS65_24485 PF10086 YhfC intramembrane metalloprotease LRS65_24505 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LRS65_24505 PF04055 Radical SAM superfamily LRS65_24510 PF01551 Peptidase family M23 LRS65_24515 PF09560 Sporulation protein YunB (Spo_YunB) LRS65_24520 PF08827 Domain of unknown function (DUF1805) LRS65_24525 PF02872 5'-nucleotidase, C-terminal domain LRS65_24530 PF01458 Uncharacterized protein family (UPF0051) LRS65_24535 PF01592 NifU-like N terminal domain LRS65_24540 PF00266 Aminotransferase class-V LRS65_24545 PF01458 Uncharacterized protein family (UPF0051) LRS65_24550 PF00005 ABC transporter LRS65_24555 PF03180 NLPA lipoprotein LRS65_24560 PF03180 NLPA lipoprotein LRS65_24565 PF00528 Binding-protein-dependent transport system inner membrane component LRS65_24570 PF00005 ABC transporter LRS65_24570 PF09383 NIL domain LRS65_24580 PF00085 Thioredoxin LRS65_24585 PF01751 Toprim domain LRS65_24590 PF01597 Glycine cleavage H-protein LRS65_24595 PF03960 ArsC family LRS65_24615 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LRS65_24615 PF00056 lactate/malate dehydrogenase, NAD binding domain LRS65_24635 PF13305 Tetracyclin repressor-like, C-terminal domain LRS65_24635 PF00440 Bacterial regulatory proteins, tetR family LRS65_24640 PF00753 Metallo-beta-lactamase superfamily LRS65_24645 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRS65_24645 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LRS65_24645 PF02770 Acyl-CoA dehydrogenase, middle domain LRS65_24650 PF02803 Thiolase, C-terminal domain LRS65_24650 PF00108 Thiolase, N-terminal domain LRS65_24655 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LRS65_24655 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LRS65_24655 PF00378 Enoyl-CoA hydratase/isomerase LRS65_24660 PF14115 YuzL-like protein LRS65_24665 PF00768 D-alanyl-D-alanine carboxypeptidase LRS65_24665 PF07943 Penicillin-binding protein 5, C-terminal domain LRS65_24670 PF01619 Proline dehydrogenase LRS65_24675 PF10835 Protein of unknown function (DUF2573) LRS65_24680 PF01910 Thiamine-binding protein LRS65_24685 PF02743 Cache domain LRS65_24685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LRS65_24685 PF00672 HAMP domain LRS65_24700 PF07690 Major Facilitator Superfamily LRS65_24705 PF13520 Amino acid permease LRS65_24720 PF02096 60Kd inner membrane protein LRS65_24730 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LRS65_24730 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LRS65_24765 PF09335 SNARE associated Golgi protein LRS65_24775 PF17969 L,D-transpeptidase C-terminal domain LRS65_24775 PF03734 L,D-transpeptidase catalytic domain LRS65_24780 PF00072 Response regulator receiver domain LRS65_24780 PF00486 Transcriptional regulatory protein, C terminal LRS65_24785 PF00512 His Kinase A (phospho-acceptor) domain LRS65_24785 PF00989 PAS fold LRS65_24785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_24785 PF16736 Single Cache-like LRS65_24810 PF00672 HAMP domain LRS65_24810 PF02743 Cache domain LRS65_24810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LRS65_24815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LRS65_24815 PF00672 HAMP domain LRS65_24815 PF02743 Cache domain LRS65_24820 PF01883 Iron-sulfur cluster assembly protein LRS65_24825 PF01447 Thermolysin metallopeptidase, catalytic domain LRS65_24825 PF02868 Thermolysin metallopeptidase, alpha-helical domain LRS65_24825 PF03413 Peptidase propeptide and YPEB domain LRS65_24825 PF07504 Fungalysin/Thermolysin Propeptide Motif LRS65_24830 PF02678 Pirin LRS65_24830 PF17954 Quercetinase C-terminal cupin domain LRS65_24835 PF01047 MarR family LRS65_24845 PF09335 SNARE associated Golgi protein LRS65_24850 PF00999 Sodium/hydrogen exchanger family LRS65_24855 PF02080 TrkA-C domain LRS65_24860 PF01235 Sodium:alanine symporter family LRS65_24865 PF00210 Ferritin-like domain LRS65_24880 PF03641 Possible lysine decarboxylase LRS65_24890 PF00210 Ferritin-like domain LRS65_24895 PF04235 Protein of unknown function (DUF418) LRS65_24895 PF07786 Protein of unknown function (DUF1624) LRS65_24900 PF07662 Na+ dependent nucleoside transporter C-terminus LRS65_24900 PF01773 Na+ dependent nucleoside transporter N-terminus LRS65_24905 PF01773 Na+ dependent nucleoside transporter N-terminus LRS65_24905 PF07662 Na+ dependent nucleoside transporter C-terminus LRS65_24910 PF01235 Sodium:alanine symporter family LRS65_24915 PF01235 Sodium:alanine symporter family LRS65_24920 PF13460 NAD(P)H-binding LRS65_24935 PF00248 Aldo/keto reductase family LRS65_24940 PF07690 Major Facilitator Superfamily LRS65_24945 PF01638 HxlR-like helix-turn-helix LRS65_24950 PF07849 Protein of unknown function (DUF1641) LRS65_24955 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRS65_24960 PF01479 S4 domain LRS65_24960 PF00579 tRNA synthetases class I (W and Y) LRS65_24965 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LRS65_24965 PF01565 FAD binding domain LRS65_24985 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LRS65_24990 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LRS65_25005 PF07690 Major Facilitator Superfamily LRS65_25010 PF00005 ABC transporter LRS65_25010 PF12848 ABC transporter LRS65_25015 PF13302 Acetyltransferase (GNAT) domain LRS65_25020 PF06146 Phosphate-starvation-inducible E LRS65_25050 PF01289 Thiol-activated cytolysin LRS65_25050 PF17440 Thiol-activated cytolysin beta sandwich domain LRS65_25055 PF00005 ABC transporter LRS65_25060 PF01032 FecCD transport family LRS65_25065 PF01032 FecCD transport family LRS65_25075 PF00072 Response regulator receiver domain LRS65_25075 PF00486 Transcriptional regulatory protein, C terminal LRS65_25085 PF01668 SmpB protein LRS65_25090 PF00773 RNB domain LRS65_25090 PF17876 Cold shock domain LRS65_25090 PF00575 S1 RNA binding domain LRS65_25090 PF08206 Ribonuclease B OB domain LRS65_25095 PF12146 Serine aminopeptidase, S33 LRS65_25100 PF03840 Preprotein translocase SecG subunit LRS65_25105 PF04172 LrgB-like family LRS65_25110 PF03788 LrgA family LRS65_25115 PF01156 Inosine-uridine preferring nucleoside hydrolase LRS65_25120 PF00113 Enolase, C-terminal TIM barrel domain LRS65_25120 PF03952 Enolase, N-terminal domain LRS65_25125 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LRS65_25125 PF01676 Metalloenzyme superfamily LRS65_25130 PF00121 Triosephosphate isomerase LRS65_25135 PF00162 Phosphoglycerate kinase LRS65_25140 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LRS65_25140 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LRS65_25145 PF04198 Putative sugar-binding domain LRS65_25155 PF00309 Sigma-54 factor, Activator interacting domain (AID) LRS65_25155 PF04963 Sigma-54 factor, core binding domain LRS65_25155 PF04552 Sigma-54, DNA binding domain LRS65_25170 PF13732 Domain of unknown function (DUF4162) LRS65_25170 PF00005 ABC transporter LRS65_25175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_25175 PF07730 Histidine kinase LRS65_25180 PF00196 Bacterial regulatory proteins, luxR family LRS65_25180 PF00072 Response regulator receiver domain LRS65_25200 PF03862 SpoVAC/SpoVAEB sporulation membrane protein LRS65_25205 PF07451 Stage V sporulation protein AD (SpoVAD) LRS65_25210 PF03862 SpoVAC/SpoVAEB sporulation membrane protein LRS65_25220 PF04239 Protein of unknown function (DUF421) LRS65_25225 PF00574 Clp protease LRS65_25230 PF00381 PTS HPr component phosphorylation site LRS65_25235 PF02650 WhiA C-terminal HTH domain LRS65_25235 PF14527 WhiA LAGLIDADG-like domain LRS65_25235 PF10298 WhiA N-terminal LAGLIDADG-like domain LRS65_25240 PF01933 Uncharacterised protein family UPF0052 LRS65_25245 PF03668 P-loop ATPase protein family LRS65_25250 PF00293 NUDIX domain LRS65_25260 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRS65_25270 PF14602 Hexapeptide repeat of succinyl-transferase LRS65_25275 PF13419 Haloacid dehalogenase-like hydrolase LRS65_25280 PF01790 Prolipoprotein diacylglyceryl transferase LRS65_25285 PF07475 HPr Serine kinase C-terminal domain LRS65_25285 PF02603 HPr Serine kinase N terminus LRS65_25290 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV LRS65_25300 PF17760 UvrA interaction domain LRS65_25300 PF00005 ABC transporter LRS65_25300 PF17755 UvrA DNA-binding domain LRS65_25305 PF04851 Type III restriction enzyme, res subunit LRS65_25305 PF02151 UvrB/uvrC motif LRS65_25305 PF12344 Ultra-violet resistance protein B LRS65_25305 PF17757 UvrB interaction domain LRS65_25305 PF00271 Helicase conserved C-terminal domain LRS65_25320 PF13411 MerR HTH family regulatory protein LRS65_25320 PF07739 TipAS antibiotic-recognition domain LRS65_25335 PF03601 Conserved hypothetical protein 698 LRS65_25340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRS65_25340 PF03466 LysR substrate binding domain LRS65_25345 PF00376 MerR family regulatory protein LRS65_25345 PF09278 MerR, DNA binding LRS65_25350 PF03358 NADPH-dependent FMN reductase LRS65_25355 PF00005 ABC transporter LRS65_25355 PF12848 ABC transporter LRS65_25360 PF01906 Putative heavy-metal-binding LRS65_25365 PF00664 ABC transporter transmembrane region LRS65_25365 PF00005 ABC transporter LRS65_25370 PF17820 PDZ domain LRS65_25375 PF01471 Putative peptidoglycan binding domain LRS65_25375 PF17820 PDZ domain LRS65_25375 PF03572 Peptidase family S41 LRS65_25380 PF18075 FtsX extracellular domain LRS65_25380 PF02687 FtsX-like permease family LRS65_25385 PF00005 ABC transporter LRS65_25390 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LRS65_25400 PF01043 SecA preprotein cross-linking domain LRS65_25400 PF02810 SEC-C motif LRS65_25400 PF07516 SecA Wing and Scaffold domain LRS65_25400 PF07517 SecA DEAD-like domain LRS65_25405 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LRS65_25405 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus LRS65_25410 PF00313 'Cold-shock' DNA-binding domain LRS65_25420 PF04851 Type III restriction enzyme, res subunit LRS65_25420 PF00271 Helicase conserved C-terminal domain LRS65_25425 PF00877 NlpC/P60 family LRS65_25425 PF01476 LysM domain LRS65_25430 PF01638 HxlR-like helix-turn-helix LRS65_25435 PF02645 Uncharacterised protein, DegV family COG1307 LRS65_25440 PF01205 Uncharacterized protein family UPF0029 LRS65_25440 PF09186 Domain of unknown function (DUF1949) LRS65_25445 PF03816 Cell envelope-related transcriptional attenuator domain LRS65_25450 PF02350 UDP-N-acetylglucosamine 2-epimerase LRS65_25455 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LRS65_25455 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LRS65_25455 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LRS65_25460 PF00953 Glycosyl transferase family 4 LRS65_25465 PF01522 Polysaccharide deacetylase LRS65_25470 PF00874 PRD domain LRS65_25470 PF00158 Sigma-54 interaction domain LRS65_25470 PF03610 PTS system fructose IIA component LRS65_25480 PF02417 Chromate transporter LRS65_25485 PF04794 YdjC-like protein LRS65_25490 PF02056 Family 4 glycosyl hydrolase LRS65_25490 PF11975 Family 4 glycosyl hydrolase C-terminal domain LRS65_25495 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LRS65_25500 PF02378 Phosphotransferase system, EIIC LRS65_25505 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LRS65_25515 PF02675 S-adenosylmethionine decarboxylase LRS65_25520 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LRS65_25525 PF02378 Phosphotransferase system, EIIC LRS65_25530 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LRS65_25535 PF00375 Sodium:dicarboxylate symporter family LRS65_25555 PF03466 LysR substrate binding domain LRS65_25555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRS65_25570 PF01654 Cytochrome bd terminal oxidase subunit I LRS65_25575 PF02322 Cytochrome bd terminal oxidase subunit II LRS65_25580 PF02040 Arsenical pump membrane protein LRS65_25585 PF01964 Radical SAM ThiC family LRS65_25585 PF13667 ThiC-associated domain LRS65_25590 PF02652 L-lactate permease LRS65_25600 PF09988 Uncharacterized metal-binding protein (DUF2227) LRS65_25610 PF00884 Sulfatase LRS65_25615 PF01063 Amino-transferase class IV LRS65_25620 PF00877 NlpC/P60 family LRS65_25620 PF01476 LysM domain LRS65_25625 PF07662 Na+ dependent nucleoside transporter C-terminus LRS65_25625 PF01773 Na+ dependent nucleoside transporter N-terminus LRS65_25640 PF02028 BCCT, betaine/carnitine/choline family transporter LRS65_25645 PF01476 LysM domain LRS65_25645 PF06725 3D domain LRS65_25670 PF04434 SWIM zinc finger LRS65_25675 PF12419 SNF2 Helicase protein LRS65_25675 PF00271 Helicase conserved C-terminal domain LRS65_25675 PF00176 SNF2 family N-terminal domain LRS65_25705 PF04542 Sigma-70 region 2 LRS65_25705 PF04545 Sigma-70, region 4 LRS65_25715 PF02687 FtsX-like permease family LRS65_25715 PF12704 MacB-like periplasmic core domain LRS65_25720 PF00005 ABC transporter LRS65_25740 PF07690 Major Facilitator Superfamily LRS65_25755 PF16736 Single Cache-like LRS65_25755 PF00512 His Kinase A (phospho-acceptor) domain LRS65_25755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_25755 PF00989 PAS fold LRS65_25760 PF00072 Response regulator receiver domain LRS65_25760 PF00486 Transcriptional regulatory protein, C terminal LRS65_25770 PF03816 Cell envelope-related transcriptional attenuator domain LRS65_25775 PF16363 GDP-mannose 4,6 dehydratase LRS65_25780 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LRS65_25780 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LRS65_25780 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LRS65_25785 PF00535 Glycosyl transferase family 2 LRS65_25805 PF02397 Bacterial sugar transferase LRS65_25810 PF00483 Nucleotidyl transferase LRS65_25820 PF13614 AAA domain LRS65_25825 PF13807 G-rich domain on putative tyrosine kinase LRS65_25825 PF02706 Chain length determinant protein LRS65_25830 PF13614 AAA domain LRS65_25835 PF07977 FabA-like domain LRS65_25845 PF12116 Stage III sporulation protein D LRS65_25855 PF01551 Peptidase family M23 LRS65_25865 PF00005 ABC transporter LRS65_25870 PF04397 LytTr DNA-binding domain LRS65_25870 PF00072 Response regulator receiver domain LRS65_25875 PF08486 Stage II sporulation protein LRS65_25880 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LRS65_25890 PF06612 Protein of unknown function (DUF1146) LRS65_25895 PF00361 Proton-conducting membrane transporter LRS65_25900 PF00361 Proton-conducting membrane transporter LRS65_25905 PF00361 Proton-conducting membrane transporter LRS65_25905 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LRS65_25905 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus LRS65_25910 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LRS65_25915 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LRS65_25925 PF00146 NADH dehydrogenase LRS65_25930 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LRS65_25935 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LRS65_25940 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LRS65_25945 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LRS65_25950 PF00990 Diguanylate cyclase, GGDEF domain LRS65_25950 PF03707 Bacterial signalling protein N terminal repeat LRS65_25950 PF00563 EAL domain LRS65_25965 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LRS65_25965 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LRS65_25970 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LRS65_25970 PF02874 ATP synthase alpha/beta family, beta-barrel domain LRS65_25975 PF00231 ATP synthase LRS65_25980 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LRS65_25980 PF00306 ATP synthase alpha/beta chain, C terminal domain LRS65_25980 PF02874 ATP synthase alpha/beta family, beta-barrel domain LRS65_25985 PF00213 ATP synthase delta (OSCP) subunit LRS65_25990 PF00430 ATP synthase B/B' CF(0) LRS65_25995 PF00137 ATP synthase subunit C LRS65_26000 PF00119 ATP synthase A chain LRS65_26005 PF03899 ATP synthase I chain LRS65_26025 PF00464 Serine hydroxymethyltransferase LRS65_26030 PF04260 Protein of unknown function (DUF436) LRS65_26035 PF02502 Ribose/Galactose Isomerase LRS65_26040 PF01451 Low molecular weight phosphotyrosine protein phosphatase LRS65_26045 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LRS65_26050 PF07681 DoxX LRS65_26055 PF01613 Flavin reductase like domain LRS65_26065 PF02659 Putative manganese efflux pump LRS65_26070 PF03481 Putative GTP-binding controlling metal-binding LRS65_26070 PF01300 Telomere recombination LRS65_26080 PF09551 Stage II sporulation protein R (spore_II_R) LRS65_26085 PF17827 PrmC N-terminal domain LRS65_26085 PF13847 Methyltransferase domain LRS65_26090 PF03462 PCRF domain LRS65_26090 PF00472 RF-1 domain LRS65_26095 PF00265 Thymidine kinase LRS65_26100 PF01197 Ribosomal protein L31 LRS65_26105 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LRS65_26105 PF07498 Rho termination factor, N-terminal domain LRS65_26105 PF07497 Rho termination factor, RNA-binding domain LRS65_26110 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded LRS65_26115 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LRS65_26120 PF01116 Fructose-bisphosphate aldolase class-II LRS65_26125 PF00072 Response regulator receiver domain LRS65_26130 PF10740 Domain of unknown function (DUF2529) LRS65_26135 PF06418 CTP synthase N-terminus LRS65_26135 PF00117 Glutamine amidotransferase class-I LRS65_26140 PF05066 HB1, ASXL, restriction endonuclease HTH domain LRS65_26150 PF02770 Acyl-CoA dehydrogenase, middle domain LRS65_26150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRS65_26150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LRS65_26155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LRS65_26155 PF02770 Acyl-CoA dehydrogenase, middle domain LRS65_26155 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRS65_26160 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LRS65_26160 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LRS65_26165 PF00108 Thiolase, N-terminal domain LRS65_26165 PF02803 Thiolase, C-terminal domain LRS65_26170 PF13183 4Fe-4S dicluster domain LRS65_26170 PF02754 Cysteine-rich domain LRS65_26175 PF13091 PLD-like domain LRS65_26180 PF03851 UV-endonuclease UvdE LRS65_26200 PF01447 Thermolysin metallopeptidase, catalytic domain LRS65_26200 PF03413 Peptidase propeptide and YPEB domain LRS65_26200 PF07504 Fungalysin/Thermolysin Propeptide Motif LRS65_26200 PF02868 Thermolysin metallopeptidase, alpha-helical domain LRS65_26205 PF00196 Bacterial regulatory proteins, luxR family LRS65_26205 PF00072 Response regulator receiver domain LRS65_26210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_26210 PF07730 Histidine kinase LRS65_26220 PF00005 ABC transporter LRS65_26225 PF00557 Metallopeptidase family M24 LRS65_26235 PF04389 Peptidase family M28 LRS65_26235 PF02225 PA domain LRS65_26255 PF05746 DALR anticodon binding domain LRS65_26255 PF00750 tRNA synthetases class I (R) LRS65_26255 PF03485 Arginyl tRNA synthetase N terminal domain LRS65_26260 PF09148 Domain of unknown function (DUF1934) LRS65_26265 PF02016 LD-carboxypeptidase N-terminal domain LRS65_26265 PF17676 LD-carboxypeptidase C-terminal domain LRS65_26280 PF00491 Arginase family LRS65_26285 PF17284 Spermidine synthase tetramerisation domain LRS65_26290 PF07690 Major Facilitator Superfamily LRS65_26295 PF13411 MerR HTH family regulatory protein LRS65_26300 PF03009 Glycerophosphoryl diester phosphodiesterase family LRS65_26305 PF00912 Transglycosylase LRS65_26305 PF00905 Penicillin binding protein transpeptidase domain LRS65_26310 PF08741 YwhD family LRS65_26315 PF02163 Peptidase family M50 LRS65_26320 PF01361 Tautomerase enzyme LRS65_26325 PF01966 HD domain LRS65_26330 PF01497 Periplasmic binding protein LRS65_26335 PF00005 ABC transporter LRS65_26340 PF01032 FecCD transport family LRS65_26345 PF01032 FecCD transport family LRS65_26350 PF07293 Protein of unknown function (DUF1450) LRS65_26360 PF03099 Biotin/lipoate A/B protein ligase family LRS65_26365 PF01515 Phosphate acetyl/butaryl transferase LRS65_26370 PF06778 Chlorite dismutase LRS65_26375 PF07943 Penicillin-binding protein 5, C-terminal domain LRS65_26375 PF00768 D-alanyl-D-alanine carboxypeptidase LRS65_26380 PF07486 Cell Wall Hydrolase LRS65_26385 PF09671 Spore coat protein (Spore_GerQ) LRS65_26390 PF04241 Protein of unknown function (DUF423) LRS65_26400 PF07885 Ion channel LRS65_26400 PF02254 TrkA-N domain LRS65_26405 PF00860 Permease family LRS65_26415 PF12823 Domain of unknown function (DUF3817) LRS65_26430 PF03167 Uracil DNA glycosylase superfamily LRS65_26435 PF12679 ABC-2 family transporter protein LRS65_26440 PF00005 ABC transporter LRS65_26445 PF13472 GDSL-like Lipase/Acylhydrolase family LRS65_26450 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LRS65_26450 PF00356 Bacterial regulatory proteins, lacI family LRS65_26460 PF00742 Homoserine dehydrogenase LRS65_26460 PF01842 ACT domain LRS65_26460 PF03447 Homoserine dehydrogenase, NAD binding domain LRS65_26465 PF04204 Homoserine O-succinyltransferase LRS65_26470 PF01053 Cys/Met metabolism PLP-dependent enzyme LRS65_26480 PF13419 Haloacid dehalogenase-like hydrolase LRS65_26485 PF00027 Cyclic nucleotide-binding domain LRS65_26490 PF02525 Flavodoxin-like fold LRS65_26495 PF00072 Response regulator receiver domain LRS65_26495 PF00196 Bacterial regulatory proteins, luxR family LRS65_26500 PF07730 Histidine kinase LRS65_26500 PF13185 GAF domain LRS65_26505 PF08543 Phosphomethylpyrimidine kinase LRS65_26510 PF00990 Diguanylate cyclase, GGDEF domain LRS65_26510 PF07694 5TMR of 5TMR-LYT LRS65_26515 PF04328 Selenoprotein, putative LRS65_26520 PF02554 Carbon starvation protein CstA LRS65_26520 PF13722 5TM C-terminal transporter carbon starvation CstA LRS65_26525 PF00072 Response regulator receiver domain LRS65_26525 PF04397 LytTr DNA-binding domain LRS65_26530 PF07690 Major Facilitator Superfamily LRS65_26535 PF03808 Glycosyl transferase WecB/TagA/CpsF family LRS65_26540 PF00534 Glycosyl transferases group 1 LRS65_26540 PF13439 Glycosyltransferase Family 4 LRS65_26550 PF03458 UPF0126 domain LRS65_26555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LRS65_26565 PF03061 Thioesterase superfamily LRS65_26570 PF00535 Glycosyl transferase family 2 LRS65_26585 PF00535 Glycosyl transferase family 2 LRS65_26595 PF09586 Bacterial membrane protein YfhO LRS65_26600 PF00535 Glycosyl transferase family 2 LRS65_26605 PF00005 ABC transporter LRS65_26605 PF12848 ABC transporter LRS65_26610 PF00440 Bacterial regulatory proteins, tetR family LRS65_26615 PF00873 AcrB/AcrD/AcrF family LRS65_26620 PF01641 SelR domain LRS65_26630 PF01594 AI-2E family transporter LRS65_26635 PF04172 LrgB-like family LRS65_26640 PF03788 LrgA family LRS65_26645 PF04397 LytTr DNA-binding domain LRS65_26645 PF00072 Response regulator receiver domain LRS65_26650 PF07694 5TMR of 5TMR-LYT LRS65_26650 PF13492 GAF domain LRS65_26650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_26650 PF06580 Histidine kinase LRS65_26655 PF07690 Major Facilitator Superfamily LRS65_26660 PF02028 BCCT, betaine/carnitine/choline family transporter LRS65_26665 PF02898 Nitric oxide synthase, oxygenase domain LRS65_26670 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LRS65_26670 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LRS65_26680 PF02293 AmiS/UreI family transporter LRS65_26685 PF16363 GDP-mannose 4,6 dehydratase LRS65_26690 PF03006 Haemolysin-III related LRS65_26700 PF00271 Helicase conserved C-terminal domain LRS65_26700 PF00270 DEAD/DEAH box helicase LRS65_26700 PF03880 DbpA RNA binding domain LRS65_26705 PF00478 IMP dehydrogenase / GMP reductase domain LRS65_26710 PF08439 Oligopeptidase F LRS65_26710 PF01432 Peptidase family M3 LRS65_26720 PF00512 His Kinase A (phospho-acceptor) domain LRS65_26720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_26720 PF13426 PAS domain LRS65_26720 PF13188 PAS domain LRS65_26720 PF00989 PAS fold LRS65_26725 PF02590 Predicted SPOUT methyltransferase LRS65_26735 PF13180 PDZ domain LRS65_26740 PF00753 Metallo-beta-lactamase superfamily LRS65_26745 PF09648 YycH protein LRS65_26755 PF13426 PAS domain LRS65_26755 PF00672 HAMP domain LRS65_26755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRS65_26755 PF00512 His Kinase A (phospho-acceptor) domain LRS65_26760 PF00072 Response regulator receiver domain LRS65_26760 PF00486 Transcriptional regulatory protein, C terminal LRS65_26785 PF00709 Adenylosuccinate synthetase LRS65_26790 PF03796 DnaB-like helicase C terminal domain LRS65_26790 PF00772 DnaB-like helicase N terminal domain LRS65_26795 PF03948 Ribosomal protein L9, C-terminal domain LRS65_26795 PF01281 Ribosomal protein L9, N-terminal domain LRS65_26800 PF01368 DHH family LRS65_26800 PF02272 DHHA1 domain LRS65_26810 PF01084 Ribosomal protein S18 LRS65_26815 PF00436 Single-strand binding protein family LRS65_26820 PF01250 Ribosomal protein S6 LRS65_26825 PF01926 50S ribosome-binding GTPase LRS65_26825 PF06071 Protein of unknown function (DUF933) LRS65_26830 PF06107 Bacterial protein of unknown function (DUF951) LRS65_26835 PF00924 Mechanosensitive ion channel LRS65_26840 PF06866 Protein of unknown function (DUF1256) LRS65_26845 PF17762 HTH domain found in ParB protein LRS65_26845 PF02195 ParB-like nuclease domain LRS65_26850 PF13614 AAA domain LRS65_26855 PF17762 HTH domain found in ParB protein LRS65_26855 PF02195 ParB-like nuclease domain LRS65_26860 PF02527 rRNA small subunit methyltransferase G LRS65_26865 PF01134 Glucose inhibited division protein A LRS65_26865 PF13932 GidA associated domain LRS65_26870 PF01926 50S ribosome-binding GTPase LRS65_26870 PF12631 MnmE helical domain LRS65_26870 PF10396 GTP-binding protein TrmE N-terminus LRS65_26875 PF14804 Jag N-terminus LRS65_26875 PF01424 R3H domain LRS65_26880 PF02096 60Kd inner membrane protein LRS65_26885 PF00825 Ribonuclease P LRS65_26890 PF00468 Ribosomal protein L34 LRS65_27090 PF13676 TIR domain LRS65_27125 PF14200 Ricin-type beta-trefoil lectin domain-like LRS65_27125 PF01400 Astacin (Peptidase family M12A) LRS65_27135 PF00589 Phage integrase family LRS65_27150 PF14040 Deoxyribonuclease NucA/NucB LRS65_27155 PF01734 Patatin-like phospholipase LRS65_27175 PF11798 IMS family HHH motif LRS65_27175 PF00817 impB/mucB/samB family LRS65_27175 PF11799 impB/mucB/samB family C-terminal domain LRS65_27250 PF17209 Hfq protein