locus-tag class description LW858_00005 PF03354 Phage Terminase LW858_00015 PF00574 Clp protease LW858_00080 PF01510 N-acetylmuramoyl-L-alanine amidase LW858_00100 PF17854 FtsK alpha domain LW858_00100 PF09397 Ftsk gamma domain LW858_00100 PF01580 FtsK/SpoIIIE family LW858_00120 PF01910 Thiamine-binding protein LW858_00125 PF00528 Binding-protein-dependent transport system inner membrane component LW858_00135 PF00005 ABC transporter LW858_00145 PF00041 Fibronectin type III domain LW858_00145 PF00704 Glycosyl hydrolases family 18 LW858_00170 PF00440 Bacterial regulatory proteins, tetR family LW858_00170 PF08360 QacR-like protein, C-terminal region LW858_00185 PF11700 Vacuole effluxer Atg22 like LW858_00205 PF03129 Anticodon binding domain LW858_00205 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LW858_00205 PF09180 Prolyl-tRNA synthetase, C-terminal LW858_00215 PF00480 ROK family LW858_00220 PF02342 TerD domain LW858_00225 PF02342 TerD domain LW858_00230 PF02342 TerD domain LW858_00235 PF03741 Integral membrane protein TerC family LW858_00240 PF14266 Putative component of 'biosynthetic module' LW858_00245 PF05816 Toxic anion resistance protein (TelA) LW858_00250 PF00690 Cation transporter/ATPase, N-terminus LW858_00250 PF00689 Cation transporting ATPase, C-terminus LW858_00255 PF06569 Protein of unknown function (DUF1128) LW858_00260 PF01451 Low molecular weight phosphotyrosine protein phosphatase LW858_00270 PF03631 Virulence factor BrkB LW858_00280 PF00892 EamA-like transporter family LW858_00290 PF10502 Signal peptidase, peptidase S26 LW858_00300 PF09335 SNARE associated Golgi protein LW858_00315 PF16242 Pyridoxamine 5'-phosphate oxidase like LW858_00320 PF01699 Sodium/calcium exchanger protein LW858_00325 PF14167 YfkD-like protein LW858_00335 PF04055 Radical SAM superfamily LW858_00335 PF08756 YfkB-like domain LW858_00345 PF05681 Fumarate hydratase (Fumerase) LW858_00345 PF05683 Fumarase C-terminus LW858_00350 PF01522 Polysaccharide deacetylase LW858_00355 PF00730 HhH-GPD superfamily base excision DNA repair protein LW858_00360 PF05958 tRNA (Uracil-5-)-methyltransferase LW858_00360 PF01938 TRAM domain LW858_00365 PF01416 tRNA pseudouridine synthase LW858_00375 PF00158 Sigma-54 interaction domain LW858_00375 PF13426 PAS domain LW858_00375 PF02954 Bacterial regulatory protein, Fis family LW858_00385 PF01546 Peptidase family M20/M25/M40 LW858_00385 PF07687 Peptidase dimerisation domain LW858_00410 PF04960 Glutaminase LW858_00415 PF02378 Phosphotransferase system, EIIC LW858_00415 PF00367 phosphotransferase system, EIIB LW858_00420 PF00144 Beta-lactamase LW858_00435 PF00535 Glycosyl transferase family 2 LW858_00440 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LW858_00440 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LW858_00440 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LW858_00445 PF02911 Formyl transferase, C-terminal domain LW858_00445 PF00551 Formyl transferase LW858_00445 PF01370 NAD dependent epimerase/dehydratase family LW858_00450 PF00535 Glycosyl transferase family 2 LW858_00460 PF02901 Pyruvate formate lyase-like LW858_00460 PF01228 Glycine radical LW858_00465 PF04055 Radical SAM superfamily LW858_00470 PF04101 Glycosyltransferase family 28 C-terminal domain LW858_00470 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase LW858_00490 PF01979 Amidohydrolase family LW858_00495 PF08338 Domain of unknown function (DUF1731) LW858_00495 PF01370 NAD dependent epimerase/dehydratase family LW858_00500 PF02631 RecX family LW858_00515 PF08176 Small acid-soluble spore protein K family LW858_00520 PF14043 WVELL protein LW858_00525 PF04307 LexA-binding, inner membrane-associated putative hydrolase LW858_00530 PF14815 NUDIX domain LW858_00530 PF00730 HhH-GPD superfamily base excision DNA repair protein LW858_00540 PF04259 Small, acid-soluble spore protein, gamma-type LW858_00545 PF14182 YgaB-like protein LW858_00550 PF04167 Protein of unknown function (DUF402) LW858_00555 PF00664 ABC transporter transmembrane region LW858_00555 PF00005 ABC transporter LW858_00560 PF06081 Aromatic acid exporter family member 1 LW858_00565 PF04898 Glutamate synthase central domain LW858_00565 PF01493 GXGXG motif LW858_00565 PF00310 Glutamine amidotransferases class-II LW858_00565 PF01645 Conserved region in glutamate synthase LW858_00570 PF00202 Aminotransferase class-III LW858_00575 PF00005 ABC transporter LW858_00590 PF07885 Ion channel LW858_00595 PF00578 AhpC/TSA family LW858_00600 PF01475 Ferric uptake regulator family LW858_00610 PF11023 Zinc-ribbon containing domain LW858_00710 PF01709 Transcriptional regulator LW858_00715 PF13344 Haloacid dehalogenase-like hydrolase LW858_00715 PF00293 NUDIX domain LW858_00720 PF00912 Transglycosylase LW858_00720 PF00905 Penicillin binding protein transpeptidase domain LW858_00725 PF13462 Thioredoxin LW858_00735 PF08331 Domain of unknown function (DUF1730) LW858_00740 PF12671 Putative amidase domain LW858_00745 PF00588 SpoU rRNA Methylase family LW858_00750 PF03707 Bacterial signalling protein N terminal repeat LW858_00750 PF00990 Diguanylate cyclase, GGDEF domain LW858_00750 PF00563 EAL domain LW858_00755 PF06798 PrkA serine protein kinase C-terminal domain LW858_00755 PF08298 PrkA AAA domain LW858_00760 PF04285 Protein of unknown function (DUF444) LW858_00775 PF02028 BCCT, betaine/carnitine/choline family transporter LW858_00780 PF01752 Collagenase LW858_00780 PF18496 Collagenase G catalytic helper subdomain LW858_00780 PF08453 Peptidase family M9 N-terminal LW858_00790 PF15975 Flotillin LW858_00790 PF01145 SPFH domain / Band 7 family LW858_00795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LW858_00795 PF02743 Cache domain LW858_00795 PF00672 HAMP domain LW858_00800 PF17203 Single cache domain 3 LW858_00800 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LW858_00800 PF00989 PAS fold LW858_00800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_00805 PF12431 Transcriptional regulator LW858_00805 PF00072 Response regulator receiver domain LW858_00810 PF03600 Citrate transporter LW858_00855 PF17912 MalK OB fold domain LW858_00855 PF00005 ABC transporter LW858_00860 PF00528 Binding-protein-dependent transport system inner membrane component LW858_00865 PF00528 Binding-protein-dependent transport system inner membrane component LW858_00870 PF13416 Bacterial extracellular solute-binding protein LW858_00880 PF00072 Response regulator receiver domain LW858_00880 PF00486 Transcriptional regulatory protein, C terminal LW858_00885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_00885 PF00512 His Kinase A (phospho-acceptor) domain LW858_00900 PF13529 Peptidase_C39 like family LW858_00905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LW858_00905 PF00672 HAMP domain LW858_00905 PF02743 Cache domain LW858_00910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_00910 PF00989 PAS fold LW858_00910 PF17203 Single cache domain 3 LW858_00910 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LW858_00915 PF00072 Response regulator receiver domain LW858_00920 PF03390 2-hydroxycarboxylate transporter family LW858_00925 PF03949 Malic enzyme, NAD binding domain LW858_00925 PF00390 Malic enzyme, N-terminal domain LW858_00935 PF00892 EamA-like transporter family LW858_00940 PF00392 Bacterial regulatory proteins, gntR family LW858_00940 PF00155 Aminotransferase class I and II LW858_00950 PF18698 Histidine kinase sensor domain LW858_00950 PF00512 His Kinase A (phospho-acceptor) domain LW858_00950 PF00672 HAMP domain LW858_00950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_00950 PF00989 PAS fold LW858_00955 PF00072 Response regulator receiver domain LW858_00955 PF00486 Transcriptional regulatory protein, C terminal LW858_00970 PF02634 FdhD/NarQ family LW858_00975 PF00037 4Fe-4S binding domain LW858_00975 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LW858_00975 PF00384 Molybdopterin oxidoreductase LW858_00975 PF01568 Molydopterin dinucleotide binding domain LW858_00975 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LW858_00980 PF07849 Protein of unknown function (DUF1641) LW858_00990 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LW858_00990 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LW858_00995 PF13520 Amino acid permease LW858_01000 PF01022 Bacterial regulatory protein, arsR family LW858_01005 PF00403 Heavy-metal-associated domain LW858_01010 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LW858_01010 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain LW858_01010 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LW858_01025 PF01447 Thermolysin metallopeptidase, catalytic domain LW858_01025 PF07504 Fungalysin/Thermolysin Propeptide Motif LW858_01025 PF03413 Peptidase propeptide and YPEB domain LW858_01025 PF02868 Thermolysin metallopeptidase, alpha-helical domain LW858_01045 PF04294 VanW like protein LW858_01050 PF03816 Cell envelope-related transcriptional attenuator domain LW858_01055 PF07662 Na+ dependent nucleoside transporter C-terminus LW858_01055 PF01773 Na+ dependent nucleoside transporter N-terminus LW858_01060 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LW858_01065 PF03471 Transporter associated domain LW858_01065 PF00571 CBS domain LW858_01065 PF01595 Cyclin M transmembrane N-terminal domain LW858_01070 PF10415 Fumarase C C-terminus LW858_01070 PF00206 Lyase LW858_01075 PF02652 L-lactate permease LW858_01080 PF01022 Bacterial regulatory protein, arsR family LW858_01085 PF08141 Small acid-soluble spore protein H family LW858_01095 PF00854 POT family LW858_01100 PF01497 Periplasmic binding protein LW858_01115 PF01032 FecCD transport family LW858_01120 PF01032 FecCD transport family LW858_01125 PF00005 ABC transporter LW858_01135 PF00155 Aminotransferase class I and II LW858_01140 PF01370 NAD dependent epimerase/dehydratase family LW858_01145 PF00293 NUDIX domain LW858_01145 PF13344 Haloacid dehalogenase-like hydrolase LW858_01150 PF00092 von Willebrand factor type A domain LW858_01155 PF07728 AAA domain (dynein-related subfamily) LW858_01160 PF13396 Phospholipase_D-nuclease N-terminal LW858_01160 PF13091 PLD-like domain LW858_01170 PF03707 Bacterial signalling protein N terminal repeat LW858_01170 PF00563 EAL domain LW858_01170 PF00990 Diguanylate cyclase, GGDEF domain LW858_01175 PF13520 Amino acid permease LW858_01180 PF07702 UTRA domain LW858_01180 PF00392 Bacterial regulatory proteins, gntR family LW858_01185 PF02378 Phosphotransferase system, EIIC LW858_01185 PF00367 phosphotransferase system, EIIB LW858_01190 PF16657 Maltogenic Amylase, C-terminal domain LW858_01190 PF00128 Alpha amylase, catalytic domain LW858_01225 PF03323 Bacillus/Clostridium GerA spore germination protein LW858_01235 PF01636 Phosphotransferase enzyme family LW858_01240 PF01235 Sodium:alanine symporter family LW858_01245 PF00005 ABC transporter LW858_01250 PF00497 Bacterial extracellular solute-binding proteins, family 3 LW858_01255 PF00528 Binding-protein-dependent transport system inner membrane component LW858_01260 PF00528 Binding-protein-dependent transport system inner membrane component LW858_01265 PF00324 Amino acid permease LW858_01280 PF04542 Sigma-70 region 2 LW858_01280 PF08281 Sigma-70, region 4 LW858_01290 PF13280 WYL domain LW858_01290 PF08279 HTH domain LW858_01295 PF01872 RibD C-terminal domain LW858_01300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_01300 PF00989 PAS fold LW858_01300 PF00512 His Kinase A (phospho-acceptor) domain LW858_01300 PF00672 HAMP domain LW858_01300 PF18698 Histidine kinase sensor domain LW858_01305 PF00072 Response regulator receiver domain LW858_01305 PF00486 Transcriptional regulatory protein, C terminal LW858_01325 PF01740 STAS domain LW858_01325 PF00916 Sulfate permease family LW858_01330 PF00582 Universal stress protein family LW858_01340 PF07690 Major Facilitator Superfamily LW858_01345 PF01047 MarR family LW858_01350 PF07690 Major Facilitator Superfamily LW858_01355 PF00356 Bacterial regulatory proteins, lacI family LW858_01365 PF05025 RbsD / FucU transport protein family LW858_01370 PF00005 ABC transporter LW858_01375 PF02653 Branched-chain amino acid transport system / permease component LW858_01380 PF13407 Periplasmic binding protein domain LW858_01385 PF00923 Transaldolase/Fructose-6-phosphate aldolase LW858_01405 PF05547 Immune inhibitor A peptidase M6 LW858_01420 PF00107 Zinc-binding dehydrogenase LW858_01420 PF08240 Alcohol dehydrogenase GroES-like domain LW858_01435 PF00882 Zinc dependent phospholipase C LW858_01440 PF03372 Endonuclease/Exonuclease/phosphatase family LW858_01445 PF00589 Phage integrase family LW858_01495 PF01695 IstB-like ATP binding protein LW858_01545 PF00589 Phage integrase family LW858_01575 PF13610 DDE domain LW858_01595 PF02673 Bacitracin resistance protein BacA LW858_01600 PF00672 HAMP domain LW858_01600 PF02743 Cache domain LW858_01600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LW858_01605 PF01476 LysM domain LW858_01605 PF06725 3D domain LW858_01610 PF01381 Helix-turn-helix LW858_01620 PF04203 Sortase domain LW858_01640 PF00854 POT family LW858_01645 PF05525 Branched-chain amino acid transport protein LW858_01665 PF00324 Amino acid permease LW858_01670 PF00860 Permease family LW858_01685 PF13673 Acetyltransferase (GNAT) domain LW858_01695 PF00999 Sodium/hydrogen exchanger family LW858_01695 PF02080 TrkA-C domain LW858_01695 PF02254 TrkA-N domain LW858_01710 PF00510 Cytochrome c oxidase subunit III LW858_01715 PF00115 Cytochrome C and Quinol oxidase polypeptide I LW858_01720 PF02790 Cytochrome C oxidase subunit II, transmembrane domain LW858_01725 PF00324 Amino acid permease LW858_01730 PF13529 Peptidase_C39 like family LW858_01735 PF07687 Peptidase dimerisation domain LW858_01735 PF01546 Peptidase family M20/M25/M40 LW858_01740 PF11755 Protein of unknown function (DUF3311) LW858_01745 PF00474 Sodium:solute symporter family LW858_01750 PF03323 Bacillus/Clostridium GerA spore germination protein LW858_01755 PF03845 Spore germination protein LW858_01765 PF02421 Ferrous iron transport protein B LW858_01765 PF07670 Nucleoside recognition LW858_01765 PF17910 FeoB cytosolic helical domain LW858_01765 PF07664 Ferrous iron transport protein B C terminus LW858_01770 PF07664 Ferrous iron transport protein B C terminus LW858_01770 PF17910 FeoB cytosolic helical domain LW858_01770 PF02421 Ferrous iron transport protein B LW858_01770 PF07670 Nucleoside recognition LW858_01775 PF07670 Nucleoside recognition LW858_01775 PF02421 Ferrous iron transport protein B LW858_01775 PF04023 FeoA domain LW858_01775 PF07664 Ferrous iron transport protein B C terminus LW858_01775 PF17910 FeoB cytosolic helical domain LW858_01785 PF12849 PBP superfamily domain LW858_01790 PF00528 Binding-protein-dependent transport system inner membrane component LW858_01795 PF00528 Binding-protein-dependent transport system inner membrane component LW858_01805 PF00873 AcrB/AcrD/AcrF family LW858_01925 PF00571 CBS domain LW858_01940 PF00246 Zinc carboxypeptidase LW858_01940 PF08239 Bacterial SH3 domain LW858_01945 PF03070 TENA/THI-4/PQQC family LW858_01950 PF00005 ABC transporter LW858_01955 PF00528 Binding-protein-dependent transport system inner membrane component LW858_01960 PF09084 NMT1/THI5 like LW858_01965 PF02581 Thiamine monophosphate synthase LW858_01970 PF01266 FAD dependent oxidoreductase LW858_01975 PF02597 ThiS family LW858_01980 PF05690 Thiazole biosynthesis protein ThiG LW858_01985 PF00899 ThiF family LW858_01990 PF08543 Phosphomethylpyrimidine kinase LW858_02015 PF03814 Potassium-transporting ATPase A subunit LW858_02025 PF02669 K+-transporting ATPase, c chain LW858_02030 PF02702 Osmosensitive K+ channel His kinase sensor domain LW858_02040 PF01047 MarR family LW858_02050 PF00860 Permease family LW858_02060 PF17969 L,D-transpeptidase C-terminal domain LW858_02060 PF03734 L,D-transpeptidase catalytic domain LW858_02075 PF13610 DDE domain LW858_02080 PF00356 Bacterial regulatory proteins, lacI family LW858_02080 PF13407 Periplasmic binding protein domain LW858_02090 PF00085 Thioredoxin LW858_02095 PF02600 Disulfide bond formation protein DsbB LW858_02100 PF02371 Transposase IS116/IS110/IS902 family LW858_02100 PF01548 Transposase LW858_02105 PF14148 YhdB-like protein LW858_02115 PF03845 Spore germination protein LW858_02125 PF03323 Bacillus/Clostridium GerA spore germination protein LW858_02135 PF00881 Nitroreductase family LW858_02155 PF04293 SpoVR like protein LW858_02165 PF09339 IclR helix-turn-helix domain LW858_02165 PF01614 Bacterial transcriptional regulator LW858_02180 PF07992 Pyridine nucleotide-disulphide oxidoreductase LW858_02180 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LW858_02185 PF02583 Metal-sensitive transcriptional repressor LW858_02190 PF00581 Rhodanese-like domain LW858_02190 PF01206 Sulfurtransferase TusA LW858_02195 PF00753 Metallo-beta-lactamase superfamily LW858_02195 PF00581 Rhodanese-like domain LW858_02200 PF01206 Sulfurtransferase TusA LW858_02205 PF00581 Rhodanese-like domain LW858_02215 PF13686 DsrE/DsrF/DrsH-like family LW858_02220 PF01925 Sulfite exporter TauE/SafE LW858_02230 PF03816 Cell envelope-related transcriptional attenuator domain LW858_02235 PF00107 Zinc-binding dehydrogenase LW858_02235 PF08240 Alcohol dehydrogenase GroES-like domain LW858_02240 PF02690 Na+/Pi-cotransporter LW858_02245 PF07690 Major Facilitator Superfamily LW858_02255 PF08279 HTH domain LW858_02255 PF05043 Mga helix-turn-helix domain LW858_02255 PF00874 PRD domain LW858_02255 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LW858_02265 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LW858_02270 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LW858_02275 PF02378 Phosphotransferase system, EIIC LW858_02290 PF01476 LysM domain LW858_02290 PF06725 3D domain LW858_02295 PF02687 FtsX-like permease family LW858_02295 PF12704 MacB-like periplasmic core domain LW858_02300 PF00005 ABC transporter LW858_02310 PF09529 Integral membrane protein (intg_mem_TP0381) LW858_02325 PF05525 Branched-chain amino acid transport protein LW858_02330 PF05067 Manganese containing catalase LW858_02335 PF12652 CotJB protein LW858_02340 PF11007 Spore coat associated protein JA (CotJA) LW858_02355 PF02735 Ku70/Ku80 beta-barrel domain LW858_02365 PF09335 SNARE associated Golgi protein LW858_02400 PF13520 Amino acid permease LW858_02405 PF00999 Sodium/hydrogen exchanger family LW858_02420 PF01418 Helix-turn-helix domain, rpiR family LW858_02420 PF01380 SIS domain LW858_02425 PF13580 SIS domain LW858_02430 PF00367 phosphotransferase system, EIIB LW858_02430 PF02378 Phosphotransferase system, EIIC LW858_02450 PF07681 DoxX LW858_02465 PF00892 EamA-like transporter family LW858_02470 PF01037 Lrp/AsnC ligand binding domain LW858_02475 PF14698 Argininosuccinate lyase C-terminal LW858_02475 PF00206 Lyase LW858_02475 PF00583 Acetyltransferase (GNAT) family LW858_02485 PF13411 MerR HTH family regulatory protein LW858_02490 PF00893 Small Multidrug Resistance protein LW858_02500 PF00440 Bacterial regulatory proteins, tetR family LW858_02500 PF17934 Tetracyclin repressor-like, C-terminal domain LW858_02505 PF07690 Major Facilitator Superfamily LW858_02510 PF01638 HxlR-like helix-turn-helix LW858_02520 PF02525 Flavodoxin-like fold LW858_02525 PF12793 Sugar transport-related sRNA regulator N-term LW858_02525 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LW858_02530 PF07690 Major Facilitator Superfamily LW858_02545 PF01965 DJ-1/PfpI family LW858_02550 PF06628 Catalase-related immune-responsive LW858_02550 PF00199 Catalase LW858_02550 PF18011 C-terminal domain found in long catalases LW858_02560 PF13520 Amino acid permease LW858_02565 PF01177 Asp/Glu/Hydantoin racemase LW858_02580 PF00171 Aldehyde dehydrogenase family LW858_02585 PF00664 ABC transporter transmembrane region LW858_02585 PF00005 ABC transporter LW858_02590 PF00664 ABC transporter transmembrane region LW858_02590 PF00005 ABC transporter LW858_02595 PF00497 Bacterial extracellular solute-binding proteins, family 3 LW858_02600 PF00528 Binding-protein-dependent transport system inner membrane component LW858_02605 PF00005 ABC transporter LW858_02610 PF00269 Small, acid-soluble spore proteins, alpha/beta type LW858_02620 PF14398 YheC/D like ATP-grasp LW858_02630 PF04286 Protein of unknown function (DUF445) LW858_02635 PF06133 Control of competence regulator ComK, YlbF/YmcA LW858_02665 PF00082 Subtilase family LW858_02680 PF18801 response regulator aspartate phosphatase H, N terminal LW858_02695 PF00082 Subtilase family LW858_02710 PF03306 Alpha-acetolactate decarboxylase LW858_02715 PF02245 Methylpurine-DNA glycosylase (MPG) LW858_02725 PF01471 Putative peptidoglycan binding domain LW858_02725 PF01510 N-acetylmuramoyl-L-alanine amidase LW858_02730 PF04055 Radical SAM superfamily LW858_02735 PF00501 AMP-binding enzyme LW858_02735 PF13193 AMP-binding enzyme C-terminal domain LW858_02750 PF01740 STAS domain LW858_02750 PF00916 Sulfate permease family LW858_02755 PF01943 Polysaccharide biosynthesis protein LW858_02755 PF14667 Polysaccharide biosynthesis C-terminal domain LW858_02785 PF00378 Enoyl-CoA hydratase/isomerase LW858_02805 PF05343 M42 glutamyl aminopeptidase LW858_02810 PF00395 S-layer homology domain LW858_02810 PF01520 N-acetylmuramoyl-L-alanine amidase LW858_02820 PF11121 Protein of unknown function (DUF2639) LW858_02825 PF05544 Proline racemase LW858_02830 PF02423 Ornithine cyclodeaminase/mu-crystallin family LW858_02835 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LW858_02840 PF00528 Binding-protein-dependent transport system inner membrane component LW858_02845 PF12911 N-terminal TM domain of oligopeptide transport permease C LW858_02845 PF00528 Binding-protein-dependent transport system inner membrane component LW858_02850 PF00005 ABC transporter LW858_02850 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LW858_02855 PF00005 ABC transporter LW858_02855 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LW858_02865 PF00753 Metallo-beta-lactamase superfamily LW858_02865 PF16123 Hydroxyacylglutathione hydrolase C-terminus LW858_02885 PF18801 response regulator aspartate phosphatase H, N terminal LW858_02900 PF13610 DDE domain LW858_03045 PF00083 Sugar (and other) transporter LW858_03050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_03050 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LW858_03055 PF12431 Transcriptional regulator LW858_03055 PF00072 Response regulator receiver domain LW858_03055 PF08279 HTH domain LW858_03060 PF03401 Tripartite tricarboxylate transporter family receptor LW858_03065 PF02342 TerD domain LW858_03070 PF02976 DNA mismatch repair enzyme MutH LW858_03075 PF00145 C-5 cytosine-specific DNA methylase LW858_03085 PF07728 AAA domain (dynein-related subfamily) LW858_03130 PF03796 DnaB-like helicase C terminal domain LW858_03130 PF00772 DnaB-like helicase N terminal domain LW858_03145 PF01925 Sulfite exporter TauE/SafE LW858_03160 PF07690 Major Facilitator Superfamily LW858_03170 PF09680 Family of unknown function LW858_03180 PF13302 Acetyltransferase (GNAT) domain LW858_03205 PF12146 Serine aminopeptidase, S33 LW858_03205 PF13026 Protein of unknown function (DUF3887) LW858_03250 PF01066 CDP-alcohol phosphatidyltransferase LW858_03265 PF02733 Dak1 domain LW858_03275 PF02733 Dak1 domain LW858_03310 PF00395 S-layer homology domain LW858_03330 PF12697 Alpha/beta hydrolase family LW858_03385 PF01906 Putative heavy-metal-binding LW858_03395 PF00107 Zinc-binding dehydrogenase LW858_03395 PF08240 Alcohol dehydrogenase GroES-like domain LW858_03400 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family LW858_03405 PF11121 Protein of unknown function (DUF2639) LW858_03420 PF00149 Calcineurin-like phosphoesterase LW858_03425 PF13514 AAA domain LW858_03430 PF01966 HD domain LW858_03430 PF01336 OB-fold nucleic acid binding domain LW858_03435 PF00589 Phage integrase family LW858_03435 PF02899 Phage integrase, N-terminal SAM-like domain LW858_03545 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain LW858_03575 PF05105 Bacteriophage holin family LW858_03580 PF01471 Putative peptidoglycan binding domain LW858_03580 PF01476 LysM domain LW858_03580 PF01510 N-acetylmuramoyl-L-alanine amidase LW858_03595 PF00082 Subtilase family LW858_03605 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LW858_03610 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LW858_03625 PF00561 alpha/beta hydrolase fold LW858_03625 PF08386 TAP-like protein LW858_03630 PF14147 Sporulation protein YhaL LW858_03640 PF03551 Transcriptional regulator PadR-like family LW858_03645 PF01266 FAD dependent oxidoreductase LW858_03645 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LW858_03650 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LW858_03650 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LW858_03655 PF00230 Major intrinsic protein LW858_03660 PF04309 Glycerol-3-phosphate responsive antiterminator LW858_03670 PF13538 UvrD-like helicase C-terminal domain LW858_03695 PF01047 MarR family LW858_03700 PF12732 YtxH-like protein LW858_03705 PF01230 HIT domain LW858_03710 PF00005 ABC transporter LW858_03715 PF05975 Bacterial ABC transporter protein EcsB LW858_03740 PF03703 Bacterial PH domain LW858_03780 PF00892 EamA-like transporter family LW858_03785 PF03703 Bacterial PH domain LW858_03790 PF03703 Bacterial PH domain LW858_03795 PF03992 Antibiotic biosynthesis monooxygenase LW858_03800 PF00912 Transglycosylase LW858_03800 PF00905 Penicillin binding protein transpeptidase domain LW858_03805 PF01208 Uroporphyrinogen decarboxylase (URO-D) LW858_03810 PF00762 Ferrochelatase LW858_03815 PF01593 Flavin containing amine oxidoreductase LW858_03840 PF03965 Penicillinase repressor LW858_03850 PF17932 Tetracyclin repressor-like, C-terminal domain LW858_03850 PF00440 Bacterial regulatory proteins, tetR family LW858_03875 PF13302 Acetyltransferase (GNAT) domain LW858_03880 PF00356 Bacterial regulatory proteins, lacI family LW858_03885 PF14149 YhfH-like protein LW858_03890 PF12706 Beta-lactamase superfamily domain LW858_03895 PF10437 Bacterial lipoate protein ligase C-terminus LW858_03895 PF03099 Biotin/lipoate A/B protein ligase family LW858_03905 PF00501 AMP-binding enzyme LW858_03905 PF13193 AMP-binding enzyme C-terminal domain LW858_03910 PF00395 S-layer homology domain LW858_03910 PF01520 N-acetylmuramoyl-L-alanine amidase LW858_03920 PF00528 Binding-protein-dependent transport system inner membrane component LW858_03925 PF00528 Binding-protein-dependent transport system inner membrane component LW858_03930 PF00005 ABC transporter LW858_03930 PF17850 CysA C-terminal regulatory domain LW858_03930 PF12857 TOBE-like domain LW858_04065 PF07968 Leukocidin/Hemolysin toxin family LW858_04075 PF12146 Serine aminopeptidase, S33 LW858_04080 PF00149 Calcineurin-like phosphoesterase LW858_04085 PF01966 HD domain LW858_04095 PF04542 Sigma-70 region 2 LW858_04095 PF08281 Sigma-70, region 4 LW858_04100 PF12833 Helix-turn-helix domain LW858_04100 PF06445 GyrI-like small molecule binding domain LW858_04105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_04105 PF00512 His Kinase A (phospho-acceptor) domain LW858_04110 PF00486 Transcriptional regulatory protein, C terminal LW858_04110 PF00072 Response regulator receiver domain LW858_04130 PF16491 CAAX prenyl protease N-terminal, five membrane helices LW858_04130 PF01435 Peptidase family M48 LW858_04135 PF02743 Cache domain LW858_04135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LW858_04135 PF00672 HAMP domain LW858_04140 PF06452 Carbohydrate family 9 binding domain-like LW858_04140 PF02018 Carbohydrate binding domain LW858_04140 PF00395 S-layer homology domain LW858_04140 PF00331 Glycosyl hydrolase family 10 LW858_04150 PF01274 Malate synthase LW858_04160 PF00463 Isocitrate lyase family LW858_04180 PF00313 'Cold-shock' DNA-binding domain LW858_04200 PF09335 SNARE associated Golgi protein LW858_04205 PF10502 Signal peptidase, peptidase S26 LW858_04210 PF13361 UvrD-like helicase C-terminal domain LW858_04210 PF12705 PD-(D/E)XK nuclease superfamily LW858_04215 PF12705 PD-(D/E)XK nuclease superfamily LW858_04215 PF13361 UvrD-like helicase C-terminal domain LW858_04215 PF00580 UvrD/REP helicase N-terminal domain LW858_04225 PF10676 Spore germination protein gerPA/gerPF LW858_04230 PF10970 Spore germination protein GerPE LW858_04240 PF10737 Spore germination protein GerPC LW858_04245 PF10803 Spore germination GerPB LW858_04250 PF10676 Spore germination protein gerPA/gerPF LW858_04255 PF09388 Spo0E like sporulation regulatory protein LW858_04260 PF01557 Fumarylacetoacetate (FAA) hydrolase family LW858_04270 PF00202 Aminotransferase class-III LW858_04275 PF07457 Protein of unknown function (DUF1516) LW858_04285 PF00733 Asparagine synthase LW858_04285 PF13537 Glutamine amidotransferase domain LW858_04295 PF00762 Ferrochelatase LW858_04300 PF00199 Catalase LW858_04300 PF06628 Catalase-related immune-responsive LW858_04310 PF00909 Ammonium Transporter Family LW858_04315 PF00128 Alpha amylase, catalytic domain LW858_04330 PF04461 Protein of unknown function (DUF520) LW858_04335 PF17783 CvfB-like winged helix domain LW858_04335 PF13509 S1 domain LW858_04340 PF05593 RHS Repeat LW858_04365 PF05593 RHS Repeat LW858_04375 PF05593 RHS Repeat LW858_04400 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LW858_04400 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LW858_04405 PF12758 Protein of unknown function (DUF3813) LW858_04420 PF14168 YjzC-like protein LW858_04425 PF10431 C-terminal, D2-small domain, of ClpB protein LW858_04425 PF02861 Clp amino terminal domain, pathogenicity island component LW858_04425 PF17871 AAA lid domain LW858_04425 PF07724 AAA domain (Cdc48 subfamily) LW858_04425 PF00004 ATPase family associated with various cellular activities (AAA) LW858_04445 PF10815 ComZ LW858_04450 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LW858_04450 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LW858_04455 PF02801 Beta-ketoacyl synthase, C-terminal domain LW858_04455 PF00109 Beta-ketoacyl synthase, N-terminal domain LW858_04460 PF10026 Predicted Zn-dependent protease (DUF2268) LW858_04465 PF12227 Protein of unknown function (DUF3603) LW858_04470 PF00579 tRNA synthetases class I (W and Y) LW858_04485 PF00528 Binding-protein-dependent transport system inner membrane component LW858_04490 PF00528 Binding-protein-dependent transport system inner membrane component LW858_04490 PF12911 N-terminal TM domain of oligopeptide transport permease C LW858_04495 PF00005 ABC transporter LW858_04495 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LW858_04500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LW858_04500 PF00005 ABC transporter LW858_04505 PF01554 MatE LW858_04520 PF03960 ArsC family LW858_04525 PF03741 Integral membrane protein TerC family LW858_04530 PF05389 Negative regulator of genetic competence (MecA) LW858_04535 PF13091 PLD-like domain LW858_04535 PF13396 Phospholipase_D-nuclease N-terminal LW858_04545 PF01432 Peptidase family M3 LW858_04545 PF08439 Oligopeptidase F LW858_04560 PF01152 Bacterial-like globin LW858_04565 PF01928 CYTH domain LW858_04575 PF00589 Phage integrase family LW858_04575 PF14659 Phage integrase, N-terminal SAM-like domain LW858_04775 PF01510 N-acetylmuramoyl-L-alanine amidase LW858_04790 PF00005 ABC transporter LW858_04815 PF00005 ABC transporter LW858_04820 PF02687 FtsX-like permease family LW858_04820 PF12704 MacB-like periplasmic core domain LW858_04835 PF04607 Region found in RelA / SpoT proteins LW858_04840 PF01513 ATP-NAD kinase LW858_04845 PF00849 RNA pseudouridylate synthase LW858_04855 PF00149 Calcineurin-like phosphoesterase LW858_04860 PF01098 Cell cycle protein LW858_04865 PF00535 Glycosyl transferase family 2 LW858_04870 PF08241 Methyltransferase domain LW858_04875 PF05711 Macrocin-O-methyltransferase (TylF) LW858_04885 PF00535 Glycosyl transferase family 2 LW858_04885 PF13181 Tetratricopeptide repeat LW858_04910 PF00483 Nucleotidyl transferase LW858_04915 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LW858_04920 PF16363 GDP-mannose 4,6 dehydratase LW858_04925 PF04321 RmlD substrate binding domain LW858_04945 PF07098 Protein of unknown function (DUF1360) LW858_04965 PF13361 UvrD-like helicase C-terminal domain LW858_04965 PF00580 UvrD/REP helicase N-terminal domain LW858_04970 PF13673 Acetyltransferase (GNAT) domain LW858_04980 PF00756 Putative esterase LW858_05000 PF02368 Bacterial Ig-like domain (group 2) LW858_05005 PF00474 Sodium:solute symporter family LW858_05010 PF04715 Anthranilate synthase component I, N terminal region LW858_05010 PF00425 chorismate binding enzyme LW858_05015 PF02885 Glycosyl transferase family, helical bundle domain LW858_05015 PF00591 Glycosyl transferase family, a/b domain LW858_05015 PF00117 Glutamine amidotransferase class-I LW858_05020 PF00591 Glycosyl transferase family, a/b domain LW858_05020 PF02885 Glycosyl transferase family, helical bundle domain LW858_05025 PF00218 Indole-3-glycerol phosphate synthase LW858_05030 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LW858_05035 PF00291 Pyridoxal-phosphate dependent enzyme LW858_05040 PF00290 Tryptophan synthase alpha chain LW858_05050 PF02652 L-lactate permease LW858_05055 PF10042 Uncharacterized conserved protein (DUF2278) LW858_05080 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LW858_05080 PF07992 Pyridine nucleotide-disulphide oxidoreductase LW858_05090 PF00881 Nitroreductase family LW858_05105 PF00364 Biotin-requiring enzyme LW858_05105 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LW858_05105 PF02817 e3 binding domain LW858_05110 PF16870 2-oxoglutarate dehydrogenase C-terminal LW858_05110 PF02779 Transketolase, pyrimidine binding domain LW858_05110 PF00676 Dehydrogenase E1 component LW858_05115 PF01381 Helix-turn-helix LW858_05160 PF13610 DDE domain LW858_05175 PF07943 Penicillin-binding protein 5, C-terminal domain LW858_05175 PF00768 D-alanyl-D-alanine carboxypeptidase LW858_05185 PF12389 Camelysin metallo-endopeptidase LW858_05195 PF12389 Camelysin metallo-endopeptidase LW858_05200 PF01381 Helix-turn-helix LW858_05200 PF08671 Anti-repressor SinI LW858_05210 PF05547 Immune inhibitor A peptidase M6 LW858_05215 PF00171 Aldehyde dehydrogenase family LW858_05220 PF08402 TOBE domain LW858_05220 PF00005 ABC transporter LW858_05225 PF00528 Binding-protein-dependent transport system inner membrane component LW858_05230 PF00528 Binding-protein-dependent transport system inner membrane component LW858_05235 PF13416 Bacterial extracellular solute-binding protein LW858_05240 PF01569 PAP2 superfamily LW858_05245 PF03176 MMPL family LW858_05255 PF00849 RNA pseudouridylate synthase LW858_05255 PF01479 S4 domain LW858_05265 PF00188 Cysteine-rich secretory protein family LW858_05270 PF13183 4Fe-4S dicluster domain LW858_05270 PF02754 Cysteine-rich domain LW858_05275 PF01565 FAD binding domain LW858_05275 PF02913 FAD linked oxidases, C-terminal domain LW858_05280 PF13556 PucR C-terminal helix-turn-helix domain LW858_05280 PF17853 GGDEF-like domain LW858_05280 PF05651 Putative sugar diacid recognition LW858_05290 PF00072 Response regulator receiver domain LW858_05290 PF00486 Transcriptional regulatory protein, C terminal LW858_05295 PF18698 Histidine kinase sensor domain LW858_05295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_05295 PF00512 His Kinase A (phospho-acceptor) domain LW858_05295 PF00989 PAS fold LW858_05295 PF00672 HAMP domain LW858_05300 PF07729 FCD domain LW858_05300 PF00392 Bacterial regulatory proteins, gntR family LW858_05305 PF02754 Cysteine-rich domain LW858_05310 PF11870 Domain of unknown function (DUF3390) LW858_05310 PF13183 4Fe-4S dicluster domain LW858_05310 PF02589 LUD domain LW858_05315 PF02589 LUD domain LW858_05320 PF06750 Bacterial Peptidase A24 N-terminal domain LW858_05320 PF01478 Type IV leader peptidase family LW858_05330 PF01226 Formate/nitrite transporter LW858_05335 PF03741 Integral membrane protein TerC family LW858_05340 PF02386 Cation transport protein LW858_05345 PF00269 Small, acid-soluble spore proteins, alpha/beta type LW858_05350 PF01575 MaoC like domain LW858_05375 PF00561 alpha/beta hydrolase fold LW858_05385 PF02386 Cation transport protein LW858_05405 PF00005 ABC transporter LW858_05405 PF08402 TOBE domain LW858_05410 PF00528 Binding-protein-dependent transport system inner membrane component LW858_05415 PF13419 Haloacid dehalogenase-like hydrolase LW858_05420 PF00266 Aminotransferase class-V LW858_05430 PF00455 DeoR C terminal sensor domain LW858_05430 PF08220 DeoR-like helix-turn-helix domain LW858_05450 PF00596 Class II Aldolase and Adducin N-terminal domain LW858_05460 PF04748 Divergent polysaccharide deacetylase LW858_05465 PF09388 Spo0E like sporulation regulatory protein LW858_05470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_05470 PF02743 Cache domain LW858_05470 PF00512 His Kinase A (phospho-acceptor) domain LW858_05475 PF01047 MarR family LW858_05485 PF12867 DinB superfamily LW858_05495 PF00989 PAS fold LW858_05495 PF00512 His Kinase A (phospho-acceptor) domain LW858_05495 PF13188 PAS domain LW858_05495 PF13426 PAS domain LW858_05495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_05500 PF06508 Queuosine biosynthesis protein QueC LW858_05505 PF01242 6-pyruvoyl tetrahydropterin synthase LW858_05510 PF04055 Radical SAM superfamily LW858_05515 PF14489 QueF-like protein LW858_05520 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) LW858_05555 PF07972 NrdI Flavodoxin like LW858_05560 PF02867 Ribonucleotide reductase, barrel domain LW858_05560 PF00317 Ribonucleotide reductase, all-alpha domain LW858_05560 PF08343 Ribonucleotide reductase N-terminal LW858_05565 PF00268 Ribonucleotide reductase, small chain LW858_05570 PF00392 Bacterial regulatory proteins, gntR family LW858_05575 PF00005 ABC transporter LW858_05585 PF00005 ABC transporter LW858_05605 PF01037 Lrp/AsnC ligand binding domain LW858_05615 PF00857 Isochorismatase family LW858_05630 PF02016 LD-carboxypeptidase N-terminal domain LW858_05630 PF17676 LD-carboxypeptidase C-terminal domain LW858_05635 PF03060 Nitronate monooxygenase LW858_05640 PF04914 DltD protein LW858_05645 PF00550 Phosphopantetheine attachment site LW858_05650 PF03062 MBOAT, membrane-bound O-acyltransferase family LW858_05655 PF00501 AMP-binding enzyme LW858_05655 PF13193 AMP-binding enzyme C-terminal domain LW858_05665 PF07687 Peptidase dimerisation domain LW858_05665 PF01546 Peptidase family M20/M25/M40 LW858_05675 PF00258 Flavodoxin LW858_05690 PF01636 Phosphotransferase enzyme family LW858_05710 PF01554 MatE LW858_05715 PF02673 Bacitracin resistance protein BacA LW858_05730 PF01047 MarR family LW858_05740 PF00375 Sodium:dicarboxylate symporter family LW858_05745 PF02386 Cation transport protein LW858_05755 PF09579 Sporulation protein YtfJ (Spore_YtfJ) LW858_05765 PF03698 Uncharacterised protein family (UPF0180) LW858_05775 PF01063 Amino-transferase class IV LW858_05780 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LW858_05780 PF00205 Thiamine pyrophosphate enzyme, central domain LW858_05780 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LW858_05785 PF01842 ACT domain LW858_05785 PF10369 Small subunit of acetolactate synthase LW858_05790 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LW858_05790 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LW858_05795 PF00682 HMGL-like LW858_05795 PF08502 LeuA allosteric (dimerisation) domain LW858_05800 PF00180 Isocitrate/isopropylmalate dehydrogenase LW858_05805 PF00330 Aconitase family (aconitate hydratase) LW858_05810 PF00694 Aconitase C-terminal domain LW858_05815 PF13393 Histidyl-tRNA synthetase LW858_05820 PF01634 ATP phosphoribosyltransferase LW858_05825 PF00815 Histidinol dehydrogenase LW858_05830 PF00475 Imidazoleglycerol-phosphate dehydratase LW858_05835 PF00117 Glutamine amidotransferase class-I LW858_05840 PF00977 Histidine biosynthesis protein LW858_05845 PF00977 Histidine biosynthesis protein LW858_05850 PF01502 Phosphoribosyl-AMP cyclohydrolase LW858_05855 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LW858_05860 PF02811 PHP domain LW858_05870 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LW858_05870 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LW858_05875 PF01066 CDP-alcohol phosphatidyltransferase LW858_05880 PF00884 Sulfatase LW858_05890 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LW858_05890 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LW858_05900 PF01507 Phosphoadenosine phosphosulfate reductase family LW858_05905 PF01747 ATP-sulfurylase LW858_05905 PF14306 PUA-like domain LW858_05915 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LW858_05915 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LW858_05925 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LW858_05930 PF01903 CbiX LW858_05940 PF00209 Sodium:neurotransmitter symporter family LW858_05955 PF00375 Sodium:dicarboxylate symporter family LW858_05965 PF03553 Na+/H+ antiporter family LW858_05980 PF09922 Cell wall-active antibiotics response 4TMS YvqF LW858_05985 PF00672 HAMP domain LW858_05985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_05985 PF07730 Histidine kinase LW858_05990 PF00072 Response regulator receiver domain LW858_05990 PF00196 Bacterial regulatory proteins, luxR family LW858_06015 PF01209 ubiE/COQ5 methyltransferase family LW858_06040 PF00970 Oxidoreductase FAD-binding domain LW858_06040 PF00175 Oxidoreductase NAD-binding domain LW858_06040 PF00042 Globin LW858_06055 PF01925 Sulfite exporter TauE/SafE LW858_06060 PF01384 Phosphate transporter family LW858_06065 PF01865 Protein of unknown function DUF47 LW858_06070 PF00905 Penicillin binding protein transpeptidase domain LW858_06070 PF00912 Transglycosylase LW858_06085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_06085 PF00512 His Kinase A (phospho-acceptor) domain LW858_06085 PF00989 PAS fold LW858_06090 PF01904 Protein of unknown function DUF72 LW858_06110 PF00589 Phage integrase family LW858_06115 PF16736 Single Cache-like LW858_06115 PF00989 PAS fold LW858_06115 PF00512 His Kinase A (phospho-acceptor) domain LW858_06115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_06120 PF01048 Phosphorylase superfamily LW858_06130 PF09924 Uncharacterised conserved protein (DUF2156) LW858_06130 PF03706 Lysylphosphatidylglycerol synthase TM region LW858_06145 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LW858_06145 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LW858_06150 PF00768 D-alanyl-D-alanine carboxypeptidase LW858_06150 PF07943 Penicillin-binding protein 5, C-terminal domain LW858_06155 PF07670 Nucleoside recognition LW858_06160 PF07670 Nucleoside recognition LW858_06165 PF00849 RNA pseudouridylate synthase LW858_06165 PF01479 S4 domain LW858_06170 PF00578 AhpC/TSA family LW858_06175 PF05140 ResB-like family LW858_06180 PF01578 Cytochrome C assembly protein LW858_06185 PF00072 Response regulator receiver domain LW858_06185 PF00486 Transcriptional regulatory protein, C terminal LW858_06190 PF00672 HAMP domain LW858_06190 PF18698 Histidine kinase sensor domain LW858_06190 PF00512 His Kinase A (phospho-acceptor) domain LW858_06190 PF00989 PAS fold LW858_06190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_06195 PF01923 Cobalamin adenosyltransferase LW858_06210 PF12822 ECF transporter, substrate-specific component LW858_06225 PF00271 Helicase conserved C-terminal domain LW858_06225 PF00270 DEAD/DEAH box helicase LW858_06230 PF02517 CPBP intramembrane metalloprotease LW858_06240 PF00149 Calcineurin-like phosphoesterase LW858_06245 PF13411 MerR HTH family regulatory protein LW858_06250 PF05389 Negative regulator of genetic competence (MecA) LW858_06255 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LW858_06255 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LW858_06280 PF17763 Glutaminase/Asparaginase C-terminal domain LW858_06280 PF00710 Asparaginase, N-terminal LW858_06290 PF02224 Cytidylate kinase LW858_06295 PF00575 S1 RNA binding domain LW858_06300 PF01070 FMN-dependent dehydrogenase LW858_06305 PF14140 YpzI-like protein LW858_06315 PF14045 YIEGIA protein LW858_06325 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LW858_06325 PF01926 50S ribosome-binding GTPase LW858_06330 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LW858_06330 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LW858_06340 PF10966 Protein of unknown function (DUF2768) LW858_06350 PF09547 Stage IV sporulation protein A (spore_IV_A) LW858_06355 PF00216 Bacterial DNA-binding protein LW858_06360 PF01227 GTP cyclohydrolase I LW858_06365 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 LW858_06370 PF01209 ubiE/COQ5 methyltransferase family LW858_06375 PF00348 Polyprenyl synthetase LW858_06380 PF00334 Nucleoside diphosphate kinase LW858_06385 PF01264 Chorismate synthase LW858_06390 PF01761 3-dehydroquinate synthase LW858_06395 PF00155 Aminotransferase class I and II LW858_06405 PF08858 IDEAL domain LW858_06405 PF08864 UPF0302 domain LW858_06410 PF10673 Protein of unknown function (DUF2487) LW858_06415 PF00355 Rieske [2Fe-2S] domain LW858_06420 PF00033 Cytochrome b/b6/petB LW858_06425 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LW858_06425 PF00032 Cytochrome b(C-terminal)/b6/petD LW858_06430 PF07187 Protein of unknown function (DUF1405) LW858_06440 PF09577 Sporulation protein YpjB (SpoYpjB) LW858_06445 PF04298 Putative neutral zinc metallopeptidase LW858_06455 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LW858_06455 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LW858_06460 PF03819 MazG nucleotide pyrophosphohydrolase domain LW858_06465 PF05173 Dihydrodipicolinate reductase, C-terminus LW858_06465 PF01113 Dihydrodipicolinate reductase, N-terminus LW858_06470 PF02142 MGS-like domain LW858_06475 PF02585 GlcNAc-PI de-N-acetylase LW858_06480 PF13439 Glycosyltransferase Family 4 LW858_06480 PF00534 Glycosyl transferases group 1 LW858_06485 PF01743 Poly A polymerase head domain LW858_06485 PF12627 Probable RNA and SrmB- binding site of polymerase A LW858_06485 PF13735 tRNA nucleotidyltransferase domain 2 putative LW858_06490 PF03099 Biotin/lipoate A/B protein ligase family LW858_06490 PF02237 Biotin protein ligase C terminal domain LW858_06490 PF08279 HTH domain LW858_06500 PF02548 Ketopantoate hydroxymethyltransferase LW858_06505 PF02569 Pantoate-beta-alanine ligase LW858_06510 PF02261 Aspartate decarboxylase LW858_06515 PF13307 Helicase C-terminal domain LW858_06515 PF00929 Exonuclease LW858_06515 PF04851 Type III restriction enzyme, res subunit LW858_06520 PF14084 Protein of unknown function (DUF4264) LW858_06530 PF00155 Aminotransferase class I and II LW858_06535 PF07261 Replication initiation and membrane attachment LW858_06540 PF00730 HhH-GPD superfamily base excision DNA repair protein LW858_06540 PF10576 Iron-sulfur binding domain of endonuclease III LW858_06540 PF00633 Helix-hairpin-helix motif LW858_06550 PF00905 Penicillin binding protein transpeptidase domain LW858_06550 PF00912 Transglycosylase LW858_06555 PF03838 Recombination protein U LW858_06560 PF10720 Protein of unknown function (DUF2515) LW858_06590 PF06908 YspA SLOG family LW858_06595 PF05103 DivIVA protein LW858_06605 PF01170 Putative RNA methylase family UPF0020 LW858_06605 PF02926 THUMP domain LW858_06615 PF13307 Helicase C-terminal domain LW858_06620 PF02074 Carboxypeptidase Taq (M32) metallopeptidase LW858_06630 PF00557 Metallopeptidase family M24 LW858_06635 PF00156 Phosphoribosyl transferase domain LW858_06650 PF04235 Protein of unknown function (DUF418) LW858_06655 PF00350 Dynamin family LW858_06665 PF00583 Acetyltransferase (GNAT) family LW858_06670 PF10752 Protein of unknown function (DUF2533) LW858_06675 PF00581 Rhodanese-like domain LW858_06710 PF00690 Cation transporter/ATPase, N-terminus LW858_06710 PF00689 Cation transporting ATPase, C-terminus LW858_06715 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LW858_06715 PF01367 5'-3' exonuclease, C-terminal SAM fold LW858_06730 PF02706 Chain length determinant protein LW858_06730 PF13807 G-rich domain on putative tyrosine kinase LW858_06740 PF02397 Bacterial sugar transferase LW858_06755 PF00535 Glycosyl transferase family 2 LW858_06760 PF13439 Glycosyltransferase Family 4 LW858_06760 PF00534 Glycosyl transferases group 1 LW858_06775 PF13673 Acetyltransferase (GNAT) domain LW858_06775 PF18014 Acetyltransferase (GNAT) domain LW858_06795 PF13456 Reverse transcriptase-like LW858_06800 PF01263 Aldose 1-epimerase LW858_06825 PF00313 'Cold-shock' DNA-binding domain LW858_06830 PF08892 YqcI/YcgG family LW858_06835 PF01810 LysE type translocator LW858_06855 PF00474 Sodium:solute symporter family LW858_06860 PF00202 Aminotransferase class-III LW858_06870 PF00999 Sodium/hydrogen exchanger family LW858_06875 PF17770 Ribonuclease J C-terminal domain LW858_06875 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LW858_06875 PF00753 Metallo-beta-lactamase superfamily LW858_06885 PF13411 MerR HTH family regulatory protein LW858_06885 PF06445 GyrI-like small molecule binding domain LW858_06895 PF04239 Protein of unknown function (DUF421) LW858_06900 PF02698 DUF218 domain LW858_06910 PF00881 Nitroreductase family LW858_06935 PF17209 Hfq protein LW858_06945 PF01618 MotA/TolQ/ExbB proton channel family LW858_06950 PF13677 Membrane MotB of proton-channel complex MotA/MotB LW858_06950 PF00691 OmpA family LW858_06955 PF00072 Response regulator receiver domain LW858_06960 PF07194 P2 response regulator binding domain LW858_06960 PF01627 Hpt domain LW858_06960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_06960 PF01584 CheW-like domain LW858_06960 PF02895 Signal transducing histidine kinase, homodimeric domain LW858_06965 PF04509 CheC-like family LW858_06965 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LW858_06980 PF01739 CheR methyltransferase, SAM binding domain LW858_06980 PF03705 CheR methyltransferase, all-alpha domain LW858_07000 PF00460 Flagella basal body rod protein LW858_07000 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LW858_07005 PF00700 Bacterial flagellin C-terminal helical region LW858_07005 PF00669 Bacterial flagellin N-terminal helical region LW858_07025 PF00460 Flagella basal body rod protein LW858_07030 PF00460 Flagella basal body rod protein LW858_07030 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LW858_07035 PF02049 Flagellar hook-basal body complex protein FliE LW858_07040 PF08345 Flagellar M-ring protein C-terminal LW858_07040 PF01514 Secretory protein of YscJ/FliF family LW858_07045 PF01706 FliG C-terminal domain LW858_07045 PF14841 FliG middle domain LW858_07045 PF14842 FliG N-terminal domain LW858_07055 PF18269 T3SS EscN ATPase C-terminal domain LW858_07055 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LW858_07055 PF02874 ATP synthase alpha/beta family, beta-barrel domain LW858_07075 PF07559 Flagellar basal body protein FlaE LW858_07075 PF00460 Flagella basal body rod protein LW858_07075 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LW858_07090 PF01584 CheW-like domain LW858_07090 PF00072 Response regulator receiver domain LW858_07095 PF12181 DNA binding domain of the motility gene repressor (MogR) LW858_07100 PF00700 Bacterial flagellin C-terminal helical region LW858_07100 PF00669 Bacterial flagellin N-terminal helical region LW858_07105 PF00700 Bacterial flagellin C-terminal helical region LW858_07105 PF00669 Bacterial flagellin N-terminal helical region LW858_07110 PF01464 Transglycosylase SLT domain LW858_07120 PF02154 Flagellar motor switch protein FliM LW858_07120 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LW858_07125 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LW858_07125 PF04509 CheC-like family LW858_07135 PF00813 FliP family LW858_07140 PF01313 Bacterial export proteins, family 3 LW858_07150 PF01312 FlhB HrpN YscU SpaS Family LW858_07155 PF00771 FHIPEP family LW858_07160 PF00448 SRP54-type protein, GTPase domain LW858_07165 PF00460 Flagella basal body rod protein LW858_07165 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LW858_07170 PF02272 DHHA1 domain LW858_07170 PF01411 tRNA synthetases class II (A) LW858_07170 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LW858_07205 PF03992 Antibiotic biosynthesis monooxygenase LW858_07210 PF08141 Small acid-soluble spore protein H family LW858_07240 PF13700 Domain of unknown function (DUF4158) LW858_07240 PF01526 Tn3 transposase DDE domain LW858_07285 PF01609 Transposase DDE domain LW858_07290 PF12996 DUF based on E. rectale Gene description (DUF3880) LW858_07300 PF13610 DDE domain LW858_07310 PF13610 DDE domain LW858_07320 PF00528 Binding-protein-dependent transport system inner membrane component LW858_07335 PF10787 Uncharacterised protein from bacillus cereus group LW858_07355 PF00300 Histidine phosphatase superfamily (branch 1) LW858_07365 PF00561 alpha/beta hydrolase fold LW858_07375 PF01047 MarR family LW858_07385 PF13537 Glutamine amidotransferase domain LW858_07385 PF00733 Asparagine synthase LW858_07405 PF16916 Dimerisation domain of Zinc Transporter LW858_07405 PF01545 Cation efflux family LW858_07415 PF00392 Bacterial regulatory proteins, gntR family LW858_07415 PF07729 FCD domain LW858_07420 PF00892 EamA-like transporter family LW858_07430 PF02492 CobW/HypB/UreG, nucleotide-binding domain LW858_07430 PF07683 Cobalamin synthesis protein cobW C-terminal domain LW858_07435 PF03773 Predicted permease LW858_07450 PF03553 Na+/H+ antiporter family LW858_07455 PF13411 MerR HTH family regulatory protein LW858_07465 PF00206 Lyase LW858_07465 PF10415 Fumarase C C-terminus LW858_07480 PF01554 MatE LW858_07485 PF03575 Peptidase family S51 LW858_07505 PF02683 Cytochrome C biogenesis protein transmembrane region LW858_07510 PF00578 AhpC/TSA family LW858_07535 PF00291 Pyridoxal-phosphate dependent enzyme LW858_07540 PF04286 Protein of unknown function (DUF445) LW858_07565 PF00196 Bacterial regulatory proteins, luxR family LW858_07565 PF00072 Response regulator receiver domain LW858_07570 PF13185 GAF domain LW858_07570 PF13492 GAF domain LW858_07570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_07570 PF07730 Histidine kinase LW858_07575 PF00005 ABC transporter LW858_07590 PF13091 PLD-like domain LW858_07595 PF00696 Amino acid kinase family LW858_07605 PF00375 Sodium:dicarboxylate symporter family LW858_07610 PF00206 Lyase LW858_07610 PF10415 Fumarase C C-terminus LW858_07615 PF00390 Malic enzyme, N-terminal domain LW858_07615 PF03949 Malic enzyme, NAD binding domain LW858_07620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_07625 PF00072 Response regulator receiver domain LW858_07625 PF08664 YcbB domain LW858_07635 PF00271 Helicase conserved C-terminal domain LW858_07635 PF04434 SWIM zinc finger LW858_07635 PF00176 SNF2 family N-terminal domain LW858_07645 PF03590 Aspartate-ammonia ligase LW858_07655 PF00696 Amino acid kinase family LW858_07655 PF13840 ACT domain LW858_07665 PF13761 Domain of unknown function (DUF4166) LW858_07670 PF14158 YndJ-like protein LW858_07675 PF09297 NADH pyrophosphatase zinc ribbon domain LW858_07675 PF00293 NUDIX domain LW858_07680 PF07690 Major Facilitator Superfamily LW858_07690 PF03976 Polyphosphate kinase 2 (PPK2) LW858_07695 PF10400 Virulence activator alpha C-term LW858_07695 PF03551 Transcriptional regulator PadR-like family LW858_07710 PF07690 Major Facilitator Superfamily LW858_07715 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LW858_07715 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LW858_07720 PF01926 50S ribosome-binding GTPase LW858_07720 PF13167 GTP-binding GTPase N-terminal LW858_07720 PF16360 GTP-binding GTPase Middle Region LW858_07725 PF07690 Major Facilitator Superfamily LW858_07730 PF00291 Pyridoxal-phosphate dependent enzyme LW858_07750 PF00209 Sodium:neurotransmitter symporter family LW858_07755 PF00457 Glycosyl hydrolases family 11 LW858_07755 PF01522 Polysaccharide deacetylase LW858_07755 PF03422 Carbohydrate binding module (family 6) LW858_07765 PF04239 Protein of unknown function (DUF421) LW858_07785 PF01625 Peptide methionine sulfoxide reductase LW858_07795 PF01063 Amino-transferase class IV LW858_07800 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LW858_07800 PF00205 Thiamine pyrophosphate enzyme, central domain LW858_07800 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LW858_07810 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LW858_07810 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LW858_07815 PF00920 Dehydratase family LW858_07820 PF00585 C-terminal regulatory domain of Threonine dehydratase LW858_07820 PF00291 Pyridoxal-phosphate dependent enzyme LW858_07830 PF09587 Bacterial capsule synthesis protein PGA_cap LW858_07845 PF07690 Major Facilitator Superfamily LW858_07860 PF04397 LytTr DNA-binding domain LW858_07860 PF00072 Response regulator receiver domain LW858_07865 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain LW858_07865 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain LW858_07880 PF01979 Amidohydrolase family LW858_07885 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LW858_07915 PF13302 Acetyltransferase (GNAT) domain LW858_07920 PF00072 Response regulator receiver domain LW858_07920 PF00486 Transcriptional regulatory protein, C terminal LW858_07925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_07925 PF00512 His Kinase A (phospho-acceptor) domain LW858_07935 PF01566 Natural resistance-associated macrophage protein LW858_07940 PF00581 Rhodanese-like domain LW858_07940 PF17773 UPF0176 acylphosphatase like domain LW858_07940 PF12368 Rhodanase C-terminal LW858_07950 PF02558 Ketopantoate reductase PanE/ApbA LW858_07950 PF08546 Ketopantoate reductase PanE/ApbA C terminal LW858_07955 PF13520 Amino acid permease LW858_07965 PF05791 Bacillus haemolytic enterotoxin (HBL) LW858_07970 PF05791 Bacillus haemolytic enterotoxin (HBL) LW858_07990 PF01906 Putative heavy-metal-binding LW858_08000 PF00440 Bacterial regulatory proteins, tetR family LW858_08005 PF04198 Putative sugar-binding domain LW858_08010 PF01791 DeoC/LacD family aldolase LW858_08025 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LW858_08030 PF07301 Protein of unknown function (DUF1453) LW858_08035 PF05979 Bacterial protein of unknown function (DUF896) LW858_08040 PF05195 Aminopeptidase P, N-terminal domain LW858_08040 PF00557 Metallopeptidase family M24 LW858_08050 PF00394 Multicopper oxidase LW858_08050 PF07731 Multicopper oxidase LW858_08050 PF07732 Multicopper oxidase LW858_08060 PF00440 Bacterial regulatory proteins, tetR family LW858_08065 PF00975 Thioesterase domain LW858_08070 PF00202 Aminotransferase class-III LW858_08070 PF13193 AMP-binding enzyme C-terminal domain LW858_08070 PF13193 AMP-binding enzyme C-terminal domain LW858_08070 PF00668 Condensation domain LW858_08070 PF16197 Ketoacyl-synthetase C-terminal extension LW858_08070 PF00109 Beta-ketoacyl synthase, N-terminal domain LW858_08070 PF02801 Beta-ketoacyl synthase, C-terminal domain LW858_08070 PF00550 Phosphopantetheine attachment site LW858_08070 PF00202 Aminotransferase class-III LW858_08070 PF00550 Phosphopantetheine attachment site LW858_08070 PF02801 Beta-ketoacyl synthase, C-terminal domain LW858_08070 PF00109 Beta-ketoacyl synthase, N-terminal domain LW858_08070 PF16197 Ketoacyl-synthetase C-terminal extension LW858_08070 PF00668 Condensation domain LW858_08070 PF00501 AMP-binding enzyme LW858_08070 PF00501 AMP-binding enzyme LW858_08075 PF13610 DDE domain LW858_08085 PF01131 DNA topoisomerase LW858_08085 PF01751 Toprim domain LW858_08085 PF13342 C-terminal repeat of topoisomerase LW858_08085 PF01396 Topoisomerase DNA binding C4 zinc finger LW858_08100 PF02525 Flavodoxin-like fold LW858_08105 PF05525 Branched-chain amino acid transport protein LW858_08110 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LW858_08115 PF13115 YtkA-like LW858_08115 PF04234 CopC domain LW858_08115 PF05425 Copper resistance protein D LW858_08120 PF07987 Domain of unkown function (DUF1775) LW858_08130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LW858_08130 PF03466 LysR substrate binding domain LW858_08135 PF02082 Transcriptional regulator LW858_08140 PF01323 DSBA-like thioredoxin domain LW858_08145 PF00881 Nitroreductase family LW858_08150 PF01425 Amidase LW858_08155 PF01594 AI-2E family transporter LW858_08160 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LW858_08160 PF00056 lactate/malate dehydrogenase, NAD binding domain LW858_08165 PF01593 Flavin containing amine oxidoreductase LW858_08170 PF02492 CobW/HypB/UreG, nucleotide-binding domain LW858_08170 PF07683 Cobalamin synthesis protein cobW C-terminal domain LW858_08180 PF00005 ABC transporter LW858_08180 PF12399 Branched-chain amino acid ATP-binding cassette transporter LW858_08185 PF00005 ABC transporter LW858_08190 PF02653 Branched-chain amino acid transport system / permease component LW858_08200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LW858_08200 PF03466 LysR substrate binding domain LW858_08220 PF01047 MarR family LW858_08230 PF01654 Cytochrome bd terminal oxidase subunit I LW858_08235 PF02322 Cytochrome bd terminal oxidase subunit II LW858_08240 PF00664 ABC transporter transmembrane region LW858_08240 PF00005 ABC transporter LW858_08245 PF00005 ABC transporter LW858_08245 PF00664 ABC transporter transmembrane region LW858_08255 PF00535 Glycosyl transferase family 2 LW858_08260 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LW858_08265 PF00132 Bacterial transferase hexapeptide (six repeats) LW858_08290 PF02016 LD-carboxypeptidase N-terminal domain LW858_08290 PF17676 LD-carboxypeptidase C-terminal domain LW858_08295 PF00768 D-alanyl-D-alanine carboxypeptidase LW858_08295 PF07943 Penicillin-binding protein 5, C-terminal domain LW858_08310 PF00877 NlpC/P60 family LW858_08310 PF01476 LysM domain LW858_08320 PF00664 ABC transporter transmembrane region LW858_08320 PF00005 ABC transporter LW858_08325 PF00072 Response regulator receiver domain LW858_08325 PF00486 Transcriptional regulatory protein, C terminal LW858_08330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_08330 PF16736 Single Cache-like LW858_08330 PF00989 PAS fold LW858_08330 PF00512 His Kinase A (phospho-acceptor) domain LW858_08340 PF00106 short chain dehydrogenase LW858_08345 PF04439 Streptomycin adenylyltransferase LW858_08350 PF01522 Polysaccharide deacetylase LW858_08370 PF01842 ACT domain LW858_08370 PF00742 Homoserine dehydrogenase LW858_08370 PF03447 Homoserine dehydrogenase, NAD binding domain LW858_08375 PF00291 Pyridoxal-phosphate dependent enzyme LW858_08380 PF08544 GHMP kinases C terminal LW858_08380 PF00288 GHMP kinases N terminal domain LW858_08395 PF03816 Cell envelope-related transcriptional attenuator domain LW858_08410 PF00072 Response regulator receiver domain LW858_08410 PF00486 Transcriptional regulatory protein, C terminal LW858_08415 PF16736 Single Cache-like LW858_08415 PF00512 His Kinase A (phospho-acceptor) domain LW858_08415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_08415 PF00989 PAS fold LW858_08420 PF01522 Polysaccharide deacetylase LW858_08430 PF02308 MgtC family LW858_08435 PF00583 Acetyltransferase (GNAT) family LW858_08440 PF06276 Ferric iron reductase FhuF-like transporter LW858_08440 PF04183 IucA / IucC family LW858_08445 PF06276 Ferric iron reductase FhuF-like transporter LW858_08445 PF04183 IucA / IucC family LW858_08450 PF00501 AMP-binding enzyme LW858_08450 PF13193 AMP-binding enzyme C-terminal domain LW858_08465 PF01261 Xylose isomerase-like TIM barrel LW858_08470 PF00269 Small, acid-soluble spore proteins, alpha/beta type LW858_08475 PF07690 Major Facilitator Superfamily LW858_08480 PF01810 LysE type translocator LW858_08485 PF00155 Aminotransferase class I and II LW858_08485 PF00392 Bacterial regulatory proteins, gntR family LW858_08495 PF01734 Patatin-like phospholipase LW858_08520 PF13344 Haloacid dehalogenase-like hydrolase LW858_08520 PF00293 NUDIX domain LW858_08525 PF02540 NAD synthase LW858_08535 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LW858_08535 PF18277 AbrB C-terminal domain LW858_08540 PF00082 Subtilase family LW858_08545 PF17912 MalK OB fold domain LW858_08545 PF03459 TOBE domain LW858_08545 PF00005 ABC transporter LW858_08550 PF13556 PucR C-terminal helix-turn-helix domain LW858_08555 PF12833 Helix-turn-helix domain LW858_08560 PF01547 Bacterial extracellular solute-binding protein LW858_08565 PF00528 Binding-protein-dependent transport system inner membrane component LW858_08570 PF00528 Binding-protein-dependent transport system inner membrane component LW858_08575 PF09508 Lacto-N-biose phosphorylase N-terminal TIM barrel domain LW858_08575 PF17386 Lacto-N-biose phosphorylase C-terminal domain LW858_08575 PF17385 Lacto-N-biose phosphorylase central domain LW858_08585 PF00480 ROK family LW858_08590 PF01380 SIS domain LW858_08595 PF01979 Amidohydrolase family LW858_08600 PF00294 pfkB family carbohydrate kinase LW858_08605 PF01791 DeoC/LacD family aldolase LW858_08610 PF12905 Endo-alpha-N-acetylgalactosaminidase LW858_08610 PF00754 F5/8 type C domain LW858_08610 PF18080 Galactose mutarotase-like fold domain LW858_08610 PF17451 Glycosyl hydrolase 101 beta sandwich domain LW858_08610 PF04650 YSIRK type signal peptide LW858_08610 PF17995 Endo-alpha-N-acetylgalactosaminidase N-terminal LW858_08610 PF17974 Galactose-binding domain-like LW858_08615 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain LW858_08615 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain LW858_08620 PF01022 Bacterial regulatory protein, arsR family LW858_08625 PF00248 Aldo/keto reductase family LW858_08630 PF07690 Major Facilitator Superfamily LW858_08635 PF05656 Protein of unknown function (DUF805) LW858_08655 PF03193 RsgA GTPase LW858_08660 PF00672 HAMP domain LW858_08660 PF02743 Cache domain LW858_08660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LW858_08680 PF00210 Ferritin-like domain LW858_08695 PF00296 Luciferase-like monooxygenase LW858_08705 PF01593 Flavin containing amine oxidoreductase LW858_08710 PF13302 Acetyltransferase (GNAT) domain LW858_08715 PF00248 Aldo/keto reductase family LW858_08720 PF07683 Cobalamin synthesis protein cobW C-terminal domain LW858_08720 PF02492 CobW/HypB/UreG, nucleotide-binding domain LW858_08725 PF00583 Acetyltransferase (GNAT) family LW858_08730 PF01297 Zinc-uptake complex component A periplasmic LW858_08740 PF13460 NAD(P)H-binding LW858_08745 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LW858_08750 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LW858_08750 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LW858_08760 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LW858_08765 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LW858_08775 PF00300 Histidine phosphatase superfamily (branch 1) LW858_08785 PF08757 CotH kinase protein LW858_08790 PF00293 NUDIX domain LW858_08795 PF09335 SNARE associated Golgi protein LW858_08800 PF01943 Polysaccharide biosynthesis protein LW858_08800 PF14667 Polysaccharide biosynthesis C-terminal domain LW858_08810 PF03773 Predicted permease LW858_08815 PF09323 Domain of unknown function (DUF1980) LW858_08820 PF03061 Thioesterase superfamily LW858_08845 PF13460 NAD(P)H-binding LW858_08850 PF04306 Protein of unknown function (DUF456) LW858_08855 PF01595 Cyclin M transmembrane N-terminal domain LW858_08855 PF03471 Transporter associated domain LW858_08855 PF00571 CBS domain LW858_08870 PF05525 Branched-chain amino acid transport protein LW858_08875 PF01588 Putative tRNA binding domain LW858_08895 PF07454 Stage II sporulation protein P (SpoIIP) LW858_08905 PF02557 D-alanyl-D-alanine carboxypeptidase LW858_08930 PF07690 Major Facilitator Superfamily LW858_08940 PF01145 SPFH domain / Band 7 family LW858_08945 PF07454 Stage II sporulation protein P (SpoIIP) LW858_08970 PF01168 Alanine racemase, N-terminal domain LW858_08970 PF00842 Alanine racemase, C-terminal domain LW858_08990 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase LW858_08995 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LW858_08995 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LW858_09000 PF00155 Aminotransferase class I and II LW858_09000 PF00392 Bacterial regulatory proteins, gntR family LW858_09030 PF00583 Acetyltransferase (GNAT) family LW858_09045 PF06013 Proteins of 100 residues with WXG LW858_09060 PF08817 WXG100 protein secretion system (Wss), protein YukD LW858_09065 PF10140 WXG100 protein secretion system (Wss), protein YukC LW858_09070 PF12538 DNA transporter LW858_09070 PF01580 FtsK/SpoIIIE family LW858_09175 PF09579 Sporulation protein YtfJ (Spore_YtfJ) LW858_09200 PF01209 ubiE/COQ5 methyltransferase family LW858_09205 PF01268 Formate--tetrahydrofolate ligase LW858_09215 PF00270 DEAD/DEAH box helicase LW858_09215 PF00271 Helicase conserved C-terminal domain LW858_09225 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LW858_09235 PF08240 Alcohol dehydrogenase GroES-like domain LW858_09235 PF00107 Zinc-binding dehydrogenase LW858_09240 PF04542 Sigma-70 region 2 LW858_09240 PF08281 Sigma-70, region 4 LW858_09250 PF03109 ABC1 family LW858_09260 PF00258 Flavodoxin LW858_09260 PF01613 Flavin reductase like domain LW858_09270 PF00255 Glutathione peroxidase LW858_09275 PF01841 Transglutaminase-like superfamily LW858_09275 PF13559 Domain of unknown function (DUF4129) LW858_09275 PF11992 Domain of unknown function (DUF3488) LW858_09280 PF01882 Protein of unknown function DUF58 LW858_09285 PF17863 AAA lid domain LW858_09285 PF07726 ATPase family associated with various cellular activities (AAA) LW858_09290 PF14710 Respiratory nitrate reductase alpha N-terminal LW858_09290 PF01568 Molydopterin dinucleotide binding domain LW858_09290 PF00384 Molybdopterin oxidoreductase LW858_09295 PF14711 Respiratory nitrate reductase beta C-terminal LW858_09295 PF13247 4Fe-4S dicluster domain LW858_09300 PF02613 Nitrate reductase delta subunit LW858_09305 PF02665 Nitrate reductase gamma subunit LW858_09310 PF00027 Cyclic nucleotide-binding domain LW858_09310 PF00325 Bacterial regulatory proteins, crp family LW858_09315 PF04055 Radical SAM superfamily LW858_09315 PF06463 Molybdenum Cofactor Synthesis C LW858_09320 PF00899 ThiF family LW858_09325 PF00994 Probable molybdopterin binding domain LW858_09325 PF03454 MoeA C-terminal region (domain IV) LW858_09325 PF03453 MoeA N-terminal region (domain I and II) LW858_09330 PF02391 MoaE protein LW858_09340 PF07690 Major Facilitator Superfamily LW858_09365 PF01903 CbiX LW858_09370 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LW858_09375 PF00355 Rieske [2Fe-2S] domain LW858_09380 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LW858_09380 PF04324 BFD-like [2Fe-2S] binding domain LW858_09380 PF18267 Rubredoxin NAD+ reductase C-terminal domain LW858_09380 PF07992 Pyridine nucleotide-disulphide oxidoreductase LW858_09380 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LW858_09385 PF04405 Domain of Unknown function (DUF542) LW858_09385 PF01814 Hemerythrin HHE cation binding domain LW858_09420 PF04232 Stage V sporulation protein S (SpoVS) LW858_09445 PF17874 MalT-like TPR region LW858_09445 PF18801 response regulator aspartate phosphatase H, N terminal LW858_09460 PF01966 HD domain LW858_09465 PF00005 ABC transporter LW858_09465 PF16326 ABC transporter C-terminal domain LW858_09465 PF12848 ABC transporter LW858_09480 PF00436 Single-strand binding protein family LW858_09485 PF13769 Virulence factor LW858_09485 PF08712 Scaffold protein Nfu/NifU N terminal LW858_09495 PF06491 Disulphide isomerase LW858_09500 PF04445 Putative SAM-dependent methyltransferase LW858_09505 PF00750 tRNA synthetases class I (R) LW858_09505 PF05746 DALR anticodon binding domain LW858_09505 PF03485 Arginyl tRNA synthetase N terminal domain LW858_09530 PF08264 Anticodon-binding domain of tRNA LW858_09530 PF00133 tRNA synthetases class I (I, L, M and V) LW858_09545 PF00152 tRNA synthetases class II (D, K and N) LW858_09545 PF01336 OB-fold nucleic acid binding domain LW858_09550 PF02595 Glycerate kinase family LW858_09560 PF00072 Response regulator receiver domain LW858_09560 PF00486 Transcriptional regulatory protein, C terminal LW858_09565 PF00512 His Kinase A (phospho-acceptor) domain LW858_09565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_09565 PF00672 HAMP domain LW858_09580 PF00209 Sodium:neurotransmitter symporter family LW858_09595 PF10997 Alternate to MurJ LW858_09600 PF13419 Haloacid dehalogenase-like hydrolase LW858_09610 PF00465 Iron-containing alcohol dehydrogenase LW858_09615 PF01177 Asp/Glu/Hydantoin racemase LW858_09620 PF01980 tRNA-methyltransferase O LW858_09625 PF00583 Acetyltransferase (GNAT) family LW858_09630 PF11188 Protein of unknown function (DUF2975) LW858_09635 PF13443 Cro/C1-type HTH DNA-binding domain LW858_09640 PF08645 Polynucleotide kinase 3 phosphatase LW858_09650 PF00005 ABC transporter LW858_09655 PF05975 Bacterial ABC transporter protein EcsB LW858_09660 PF14005 YpjP-like protein LW858_09665 PF13419 Haloacid dehalogenase-like hydrolase LW858_09680 PF00144 Beta-lactamase LW858_09680 PF07930 D-aminopeptidase, domain B LW858_09685 PF00303 Thymidylate synthase LW858_09690 PF00186 Dihydrofolate reductase LW858_09695 PF05223 NTF2-like N-terminal transpeptidase domain LW858_09695 PF00905 Penicillin binding protein transpeptidase domain LW858_09695 PF03717 Penicillin-binding Protein dimerisation domain LW858_09700 PF02525 Flavodoxin-like fold LW858_09705 PF01553 Acyltransferase LW858_09710 PF03006 Haemolysin-III related LW858_09715 PF02416 mttA/Hcf106 family LW858_09720 PF00902 Sec-independent protein translocase protein (TatC) LW858_09730 PF02645 Uncharacterised protein, DegV family COG1307 LW858_09740 PF02630 SCO1/SenC LW858_09750 PF00011 Hsp20/alpha crystallin family LW858_09755 PF00733 Asparagine synthase LW858_09755 PF13537 Glutamine amidotransferase domain LW858_09770 PF01520 N-acetylmuramoyl-L-alanine amidase LW858_09770 PF05036 Sporulation related domain LW858_09775 PF01497 Periplasmic binding protein LW858_09780 PF01063 Amino-transferase class IV LW858_09785 PF00881 Nitroreductase family LW858_09795 PF00857 Isochorismatase family LW858_09800 PF00011 Hsp20/alpha crystallin family LW858_09805 PF00924 Mechanosensitive ion channel LW858_09810 PF07730 Histidine kinase LW858_09810 PF13185 GAF domain LW858_09815 PF00072 Response regulator receiver domain LW858_09815 PF00196 Bacterial regulatory proteins, luxR family LW858_09820 PF01418 Helix-turn-helix domain, rpiR family LW858_09820 PF01380 SIS domain LW858_09825 PF02567 Phenazine biosynthesis-like protein LW858_09830 PF08240 Alcohol dehydrogenase GroES-like domain LW858_09830 PF00107 Zinc-binding dehydrogenase LW858_09845 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LW858_09845 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LW858_09850 PF02447 GntP family permease LW858_09855 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LW858_09855 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LW858_09875 PF03358 NADPH-dependent FMN reductase LW858_09890 PF00005 ABC transporter LW858_09890 PF00571 CBS domain LW858_09895 PF00528 Binding-protein-dependent transport system inner membrane component LW858_09900 PF13520 Amino acid permease LW858_09930 PF01595 Cyclin M transmembrane N-terminal domain LW858_09930 PF00571 CBS domain LW858_09930 PF03471 Transporter associated domain LW858_09935 PF00171 Aldehyde dehydrogenase family LW858_09940 PF07997 Protein of unknown function (DUF1694) LW858_09945 PF09385 Histidine kinase N terminal LW858_09955 PF00202 Aminotransferase class-III LW858_09960 PF01144 Coenzyme A transferase LW858_09965 PF01144 Coenzyme A transferase LW858_09970 PF01546 Peptidase family M20/M25/M40 LW858_09970 PF07687 Peptidase dimerisation domain LW858_09975 PF00583 Acetyltransferase (GNAT) family LW858_09980 PF13426 PAS domain LW858_09980 PF00158 Sigma-54 interaction domain LW858_09980 PF02954 Bacterial regulatory protein, Fis family LW858_09985 PF12544 Lysine-2,3-aminomutase LW858_09990 PF14122 YokU-like protein, putative antitoxin LW858_09995 PF06855 YozE SAM-like fold LW858_10010 PF14162 YozD-like protein LW858_10020 PF00069 Protein kinase domain LW858_10020 PF08239 Bacterial SH3 domain LW858_10030 PF01569 PAP2 superfamily LW858_10035 PF01545 Cation efflux family LW858_10035 PF16916 Dimerisation domain of Zinc Transporter LW858_10040 PF00085 Thioredoxin LW858_10045 PF13302 Acetyltransferase (GNAT) domain LW858_10110 PF10676 Spore germination protein gerPA/gerPF LW858_10125 PF00106 short chain dehydrogenase LW858_10145 PF00905 Penicillin binding protein transpeptidase domain LW858_10145 PF00912 Transglycosylase LW858_10155 PF07690 Major Facilitator Superfamily LW858_10160 PF01521 Iron-sulphur cluster biosynthesis LW858_10165 PF00285 Citrate synthase, C-terminal domain LW858_10170 PF03972 MmgE/PrpD family LW858_10180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LW858_10180 PF02770 Acyl-CoA dehydrogenase, middle domain LW858_10180 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LW858_10185 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LW858_10185 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LW858_10190 PF00171 Aldehyde dehydrogenase family LW858_10200 PF01810 LysE type translocator LW858_10205 PF00378 Enoyl-CoA hydratase/isomerase LW858_10220 PF00149 Calcineurin-like phosphoesterase LW858_10220 PF12320 Type 5 capsule protein repressor C-terminal domain LW858_10225 PF13476 AAA domain LW858_10235 PF01022 Bacterial regulatory protein, arsR family LW858_10250 PF07690 Major Facilitator Superfamily LW858_10255 PF00106 short chain dehydrogenase LW858_10260 PF00425 chorismate binding enzyme LW858_10265 PF00501 AMP-binding enzyme LW858_10265 PF13193 AMP-binding enzyme C-terminal domain LW858_10270 PF00857 Isochorismatase family LW858_10270 PF00550 Phosphopantetheine attachment site LW858_10275 PF00975 Thioesterase domain LW858_10275 PF00668 Condensation domain LW858_10275 PF00550 Phosphopantetheine attachment site LW858_10275 PF13193 AMP-binding enzyme C-terminal domain LW858_10275 PF00501 AMP-binding enzyme LW858_10280 PF03621 MbtH-like protein LW858_10285 PF07690 Major Facilitator Superfamily LW858_10300 PF00216 Bacterial DNA-binding protein LW858_10310 PF05163 DinB family LW858_10330 PF01235 Sodium:alanine symporter family LW858_10350 PF00849 RNA pseudouridylate synthase LW858_10350 PF01479 S4 domain LW858_10355 PF03129 Anticodon binding domain LW858_10355 PF02824 TGS domain LW858_10355 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LW858_10355 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LW858_10360 PF00005 ABC transporter LW858_10375 PF00753 Metallo-beta-lactamase superfamily LW858_10400 PF00027 Cyclic nucleotide-binding domain LW858_10415 PF00753 Metallo-beta-lactamase superfamily LW858_10415 PF16123 Hydroxyacylglutathione hydrolase C-terminus LW858_10425 PF03176 MMPL family LW858_10445 PF00583 Acetyltransferase (GNAT) family LW858_10475 PF01593 Flavin containing amine oxidoreductase LW858_10485 PF13302 Acetyltransferase (GNAT) domain LW858_10495 PF00313 'Cold-shock' DNA-binding domain LW858_10515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LW858_10515 PF03466 LysR substrate binding domain LW858_10520 PF01118 Semialdehyde dehydrogenase, NAD binding domain LW858_10520 PF02774 Semialdehyde dehydrogenase, dimerisation domain LW858_10540 PF03466 LysR substrate binding domain LW858_10540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LW858_10545 PF03473 MOSC domain LW858_10545 PF03475 3-alpha domain LW858_10560 PF00005 ABC transporter LW858_10560 PF00664 ABC transporter transmembrane region LW858_10565 PF00005 ABC transporter LW858_10565 PF00664 ABC transporter transmembrane region LW858_10595 PF07992 Pyridine nucleotide-disulphide oxidoreductase LW858_10595 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LW858_10600 PF08281 Sigma-70, region 4 LW858_10600 PF12680 SnoaL-like domain LW858_10600 PF04542 Sigma-70 region 2 LW858_10640 PF02378 Phosphotransferase system, EIIC LW858_10655 PF01869 BadF/BadG/BcrA/BcrD ATPase family LW858_10660 PF02660 Glycerol-3-phosphate acyltransferase LW858_10665 PF00266 Aminotransferase class-V LW858_10670 PF00291 Pyridoxal-phosphate dependent enzyme LW858_10675 PF01047 MarR family LW858_10680 PF07690 Major Facilitator Superfamily LW858_10690 PF00753 Metallo-beta-lactamase superfamily LW858_10690 PF16123 Hydroxyacylglutathione hydrolase C-terminus LW858_10700 PF00271 Helicase conserved C-terminal domain LW858_10700 PF00270 DEAD/DEAH box helicase LW858_10710 PF00440 Bacterial regulatory proteins, tetR family LW858_10710 PF17932 Tetracyclin repressor-like, C-terminal domain LW858_10730 PF09313 Domain of unknown function (DUF1971) LW858_10730 PF03848 Tellurite resistance protein TehB LW858_10740 PF08241 Methyltransferase domain LW858_10745 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LW858_10745 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LW858_10745 PF00205 Thiamine pyrophosphate enzyme, central domain LW858_10750 PF01047 MarR family LW858_10755 PF00300 Histidine phosphatase superfamily (branch 1) LW858_10760 PF14171 Toxin SpoIISA, type II toxin-antitoxin system LW858_10780 PF01546 Peptidase family M20/M25/M40 LW858_10780 PF07687 Peptidase dimerisation domain LW858_10795 PF00196 Bacterial regulatory proteins, luxR family LW858_10795 PF00072 Response regulator receiver domain LW858_10805 PF18277 AbrB C-terminal domain LW858_10805 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LW858_10815 PF01925 Sulfite exporter TauE/SafE LW858_10820 PF00132 Bacterial transferase hexapeptide (six repeats) LW858_10840 PF07690 Major Facilitator Superfamily LW858_10845 PF13193 AMP-binding enzyme C-terminal domain LW858_10845 PF00668 Condensation domain LW858_10845 PF00550 Phosphopantetheine attachment site LW858_10845 PF00501 AMP-binding enzyme LW858_10850 PF00501 AMP-binding enzyme LW858_10850 PF00550 Phosphopantetheine attachment site LW858_10850 PF07993 Male sterility protein LW858_10850 PF00668 Condensation domain LW858_10850 PF13193 AMP-binding enzyme C-terminal domain LW858_10860 PF01648 4'-phosphopantetheinyl transferase superfamily LW858_10865 PF00975 Thioesterase domain LW858_10875 PF05139 Erythromycin esterase LW858_10890 PF13302 Acetyltransferase (GNAT) domain LW858_10900 PF01520 N-acetylmuramoyl-L-alanine amidase LW858_10900 PF00395 S-layer homology domain LW858_10930 PF11954 Domain of unknown function (DUF3471) LW858_10930 PF00144 Beta-lactamase LW858_10935 PF05223 NTF2-like N-terminal transpeptidase domain LW858_10935 PF03717 Penicillin-binding Protein dimerisation domain LW858_10935 PF00905 Penicillin binding protein transpeptidase domain LW858_10940 PF08281 Sigma-70, region 4 LW858_10940 PF04542 Sigma-70 region 2 LW858_10950 PF00905 Penicillin binding protein transpeptidase domain LW858_10950 PF03717 Penicillin-binding Protein dimerisation domain LW858_10955 PF03717 Penicillin-binding Protein dimerisation domain LW858_10955 PF00905 Penicillin binding protein transpeptidase domain LW858_10965 PF00149 Calcineurin-like phosphoesterase LW858_10975 PF00005 ABC transporter LW858_10985 PF00440 Bacterial regulatory proteins, tetR family LW858_10985 PF08359 YsiA-like protein, C-terminal region LW858_11005 PF02770 Acyl-CoA dehydrogenase, middle domain LW858_11005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LW858_11005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LW858_11010 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LW858_11010 PF00289 Biotin carboxylase, N-terminal domain LW858_11010 PF02785 Biotin carboxylase C-terminal domain LW858_11015 PF00364 Biotin-requiring enzyme LW858_11020 PF00682 HMGL-like LW858_11025 PF00378 Enoyl-CoA hydratase/isomerase LW858_11030 PF01039 Carboxyl transferase domain LW858_11035 PF13193 AMP-binding enzyme C-terminal domain LW858_11035 PF16177 Acetyl-coenzyme A synthetase N-terminus LW858_11035 PF00501 AMP-binding enzyme LW858_11070 PF00768 D-alanyl-D-alanine carboxypeptidase LW858_11070 PF07943 Penicillin-binding protein 5, C-terminal domain LW858_11075 PF00512 His Kinase A (phospho-acceptor) domain LW858_11075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_11080 PF00486 Transcriptional regulatory protein, C terminal LW858_11080 PF00072 Response regulator receiver domain LW858_11085 PF01966 HD domain LW858_11095 PF01048 Phosphorylase superfamily LW858_11110 PF01447 Thermolysin metallopeptidase, catalytic domain LW858_11110 PF03413 Peptidase propeptide and YPEB domain LW858_11110 PF07504 Fungalysin/Thermolysin Propeptide Motif LW858_11110 PF02868 Thermolysin metallopeptidase, alpha-helical domain LW858_11115 PF17853 GGDEF-like domain LW858_11115 PF12833 Helix-turn-helix domain LW858_11145 PF00005 ABC transporter LW858_11145 PF17755 UvrA DNA-binding domain LW858_11145 PF17760 UvrA interaction domain LW858_11150 PF00376 MerR family regulatory protein LW858_11150 PF09278 MerR, DNA binding LW858_11155 PF07690 Major Facilitator Superfamily LW858_11165 PF01638 HxlR-like helix-turn-helix LW858_11210 PF00392 Bacterial regulatory proteins, gntR family LW858_11210 PF00155 Aminotransferase class I and II LW858_11235 PF08240 Alcohol dehydrogenase GroES-like domain LW858_11235 PF00107 Zinc-binding dehydrogenase LW858_11245 PF04239 Protein of unknown function (DUF421) LW858_11260 PF08450 SMP-30/Gluconolactonase/LRE-like region LW858_11270 PF01921 tRNA synthetases class I (K) LW858_11275 PF07486 Cell Wall Hydrolase LW858_11285 PF00486 Transcriptional regulatory protein, C terminal LW858_11285 PF00072 Response regulator receiver domain LW858_11290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_11300 PF00005 ABC transporter LW858_11300 PF12848 ABC transporter LW858_11310 PF00005 ABC transporter LW858_11315 PF02687 FtsX-like permease family LW858_11335 PF03447 Homoserine dehydrogenase, NAD binding domain LW858_11335 PF00742 Homoserine dehydrogenase LW858_11340 PF00392 Bacterial regulatory proteins, gntR family LW858_11340 PF00155 Aminotransferase class I and II LW858_11345 PF01820 D-ala D-ala ligase N-terminus LW858_11345 PF07478 D-ala D-ala ligase C-terminus LW858_11350 PF03070 TENA/THI-4/PQQC family LW858_11410 PF00067 Cytochrome P450 LW858_11425 PF07561 Domain of Unknown Function (DUF1540) LW858_11435 PF00067 Cytochrome P450 LW858_11455 PF13188 PAS domain LW858_11455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_11455 PF00512 His Kinase A (phospho-acceptor) domain LW858_11455 PF00989 PAS fold LW858_11455 PF13426 PAS domain LW858_11460 PF03717 Penicillin-binding Protein dimerisation domain LW858_11460 PF00905 Penicillin binding protein transpeptidase domain LW858_11465 PF10502 Signal peptidase, peptidase S26 LW858_11470 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase LW858_11475 PF01177 Asp/Glu/Hydantoin racemase LW858_11480 PF07155 ECF-type riboflavin transporter, S component LW858_11485 PF00005 ABC transporter LW858_11485 PF12558 ATP-binding cassette cobalt transporter LW858_11500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_11500 PF00512 His Kinase A (phospho-acceptor) domain LW858_11510 PF04229 GrpB protein LW858_11515 PF00107 Zinc-binding dehydrogenase LW858_11515 PF08240 Alcohol dehydrogenase GroES-like domain LW858_11520 PF01569 PAP2 superfamily LW858_11525 PF03793 PASTA domain LW858_11525 PF03717 Penicillin-binding Protein dimerisation domain LW858_11525 PF00905 Penicillin binding protein transpeptidase domain LW858_11575 PF01609 Transposase DDE domain LW858_11580 PF07690 Major Facilitator Superfamily LW858_11595 PF03009 Glycerophosphoryl diester phosphodiesterase family LW858_11615 PF00392 Bacterial regulatory proteins, gntR family LW858_11615 PF00155 Aminotransferase class I and II LW858_11620 PF00892 EamA-like transporter family LW858_11625 PF01270 Glycosyl hydrolases family 8 LW858_11630 PF01156 Inosine-uridine preferring nucleoside hydrolase LW858_11645 PF13344 Haloacid dehalogenase-like hydrolase LW858_11645 PF00293 NUDIX domain LW858_11655 PF00144 Beta-lactamase LW858_11665 PF07690 Major Facilitator Superfamily LW858_11680 PF09297 NADH pyrophosphatase zinc ribbon domain LW858_11680 PF00293 NUDIX domain LW858_11685 PF00712 DNA polymerase III beta subunit, N-terminal domain LW858_11685 PF02767 DNA polymerase III beta subunit, central domain LW858_11685 PF02768 DNA polymerase III beta subunit, C-terminal domain LW858_11695 PF12706 Beta-lactamase superfamily domain LW858_11705 PF01042 Endoribonuclease L-PSP LW858_11730 PF01734 Patatin-like phospholipase LW858_11735 PF08000 Bacterial PH domain LW858_11745 PF12867 DinB superfamily LW858_11760 PF02673 Bacitracin resistance protein BacA LW858_11770 PF01541 GIY-YIG catalytic domain LW858_11800 PF00005 ABC transporter LW858_11820 PF01266 FAD dependent oxidoreductase LW858_11850 PF00144 Beta-lactamase LW858_11855 PF13419 Haloacid dehalogenase-like hydrolase LW858_11875 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LW858_11875 PF03714 Bacterial pullanase-associated domain LW858_11875 PF00128 Alpha amylase, catalytic domain LW858_11880 PF02868 Thermolysin metallopeptidase, alpha-helical domain LW858_11880 PF01447 Thermolysin metallopeptidase, catalytic domain LW858_11880 PF03413 Peptidase propeptide and YPEB domain LW858_11880 PF07504 Fungalysin/Thermolysin Propeptide Motif LW858_11885 PF02872 5'-nucleotidase, C-terminal domain LW858_11885 PF00149 Calcineurin-like phosphoesterase LW858_11900 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LW858_11905 PF00344 SecY translocase LW858_11910 PF00892 EamA-like transporter family LW858_11915 PF00155 Aminotransferase class I and II LW858_11915 PF00392 Bacterial regulatory proteins, gntR family LW858_11920 PF00561 alpha/beta hydrolase fold LW858_11945 PF06081 Aromatic acid exporter family member 1 LW858_11960 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) LW858_11965 PF03413 Peptidase propeptide and YPEB domain LW858_11965 PF14620 YpeB sporulation LW858_11970 PF07486 Cell Wall Hydrolase LW858_11970 PF01471 Putative peptidoglycan binding domain LW858_11990 PF03301 Tryptophan 2,3-dioxygenase LW858_11995 PF04199 Putative cyclase LW858_12000 PF00266 Aminotransferase class-V LW858_12005 PF00440 Bacterial regulatory proteins, tetR family LW858_12005 PF08359 YsiA-like protein, C-terminal region LW858_12010 PF13344 Haloacid dehalogenase-like hydrolase LW858_12010 PF00293 NUDIX domain LW858_12025 PF00158 Sigma-54 interaction domain LW858_12025 PF01590 GAF domain LW858_12025 PF02954 Bacterial regulatory protein, Fis family LW858_12035 PF13302 Acetyltransferase (GNAT) domain LW858_12040 PF00455 DeoR C terminal sensor domain LW858_12040 PF08220 DeoR-like helix-turn-helix domain LW858_12065 PF07992 Pyridine nucleotide-disulphide oxidoreductase LW858_12065 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LW858_12070 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LW858_12070 PF00364 Biotin-requiring enzyme LW858_12070 PF02817 e3 binding domain LW858_12075 PF02779 Transketolase, pyrimidine binding domain LW858_12075 PF02780 Transketolase, C-terminal domain LW858_12080 PF00676 Dehydrogenase E1 component LW858_12090 PF00106 short chain dehydrogenase LW858_12095 PF13789 Domain of unknown function (DUF4181) LW858_12120 PF00528 Binding-protein-dependent transport system inner membrane component LW858_12125 PF00005 ABC transporter LW858_12125 PF00571 CBS domain LW858_12130 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LW858_12135 PF00574 Clp protease LW858_12150 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LW858_12155 PF13673 Acetyltransferase (GNAT) domain LW858_12160 PF18416 N-acetylglucosamine binding protein domain 2 LW858_12160 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LW858_12165 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase LW858_12170 PF03781 Sulfatase-modifying factor enzyme 1 LW858_12185 PF10990 Protein of unknown function (DUF2809) LW858_12190 PF08241 Methyltransferase domain LW858_12195 PF04237 YjbR LW858_12240 PF00583 Acetyltransferase (GNAT) family LW858_12255 PF13538 UvrD-like helicase C-terminal domain LW858_12270 PF09382 RQC domain LW858_12270 PF00570 HRDC domain LW858_12270 PF00271 Helicase conserved C-terminal domain LW858_12270 PF00270 DEAD/DEAH box helicase LW858_12270 PF16124 RecQ zinc-binding LW858_12295 PF01510 N-acetylmuramoyl-L-alanine amidase LW858_12295 PF12123 N-acetylmuramoyl-l-alanine amidase LW858_12315 PF02833 DHHA2 domain LW858_12315 PF01368 DHH family LW858_12320 PF18416 N-acetylglucosamine binding protein domain 2 LW858_12320 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LW858_12335 PF02627 Carboxymuconolactone decarboxylase family LW858_12340 PF01235 Sodium:alanine symporter family LW858_12345 PF00171 Aldehyde dehydrogenase family LW858_12350 PF00701 Dihydrodipicolinate synthetase family LW858_12355 PF05544 Proline racemase LW858_12360 PF05544 Proline racemase LW858_12365 PF01266 FAD dependent oxidoreductase LW858_12370 PF00158 Sigma-54 interaction domain LW858_12370 PF13188 PAS domain LW858_12370 PF02954 Bacterial regulatory protein, Fis family LW858_12375 PF07992 Pyridine nucleotide-disulphide oxidoreductase LW858_12375 PF04324 BFD-like [2Fe-2S] binding domain LW858_12385 PF07992 Pyridine nucleotide-disulphide oxidoreductase LW858_12385 PF04324 BFD-like [2Fe-2S] binding domain LW858_12400 PF08876 Domain of unknown function (DUF1836) LW858_12405 PF01966 HD domain LW858_12410 PF09335 SNARE associated Golgi protein LW858_12420 PF04914 DltD protein LW858_12450 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain LW858_12450 PF00877 NlpC/P60 family LW858_12455 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LW858_12455 PF13378 Enolase C-terminal domain-like LW858_12470 PF00248 Aldo/keto reductase family LW858_12475 PF01965 DJ-1/PfpI family LW858_12505 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain LW858_12505 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LW858_12515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_12515 PF00512 His Kinase A (phospho-acceptor) domain LW858_12515 PF00672 HAMP domain LW858_12520 PF00072 Response regulator receiver domain LW858_12520 PF00486 Transcriptional regulatory protein, C terminal LW858_12540 PF13419 Haloacid dehalogenase-like hydrolase LW858_12545 PF01048 Phosphorylase superfamily LW858_12550 PF03808 Glycosyl transferase WecB/TagA/CpsF family LW858_12555 PF01432 Peptidase family M3 LW858_12555 PF08439 Oligopeptidase F LW858_12560 PF02645 Uncharacterised protein, DegV family COG1307 LW858_12565 PF07552 Spore Coat Protein X and V domain LW858_12605 PF07690 Major Facilitator Superfamily LW858_12615 PF04519 Polymer-forming cytoskeletal LW858_12620 PF13171 Protein of unknown function (DUF4004) LW858_12625 PF12793 Sugar transport-related sRNA regulator N-term LW858_12625 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LW858_12630 PF07690 Major Facilitator Superfamily LW858_12650 PF04226 Transglycosylase associated protein LW858_12665 PF08241 Methyltransferase domain LW858_12700 PF00155 Aminotransferase class I and II LW858_12705 PF07977 FabA-like domain LW858_12710 PF03630 Fumble LW858_12760 PF01594 AI-2E family transporter LW858_12775 PF00296 Luciferase-like monooxygenase LW858_12780 PF00528 Binding-protein-dependent transport system inner membrane component LW858_12785 PF09084 NMT1/THI5 like LW858_12790 PF00005 ABC transporter LW858_12825 PF02522 Aminoglycoside 3-N-acetyltransferase LW858_12835 PF13536 Putative multidrug resistance efflux transporter LW858_12840 PF12867 DinB superfamily LW858_12860 PF08713 DNA alkylation repair enzyme LW858_12865 PF00291 Pyridoxal-phosphate dependent enzyme LW858_12870 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LW858_12880 PF01522 Polysaccharide deacetylase LW858_12890 PF03741 Integral membrane protein TerC family LW858_12895 PF00884 Sulfatase LW858_12900 PF12848 ABC transporter LW858_12900 PF00005 ABC transporter LW858_12910 PF03176 MMPL family LW858_12915 PF16295 Tetracyclin repressor-like, C-terminal domain LW858_12915 PF00440 Bacterial regulatory proteins, tetR family LW858_12925 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LW858_12930 PF01842 ACT domain LW858_12930 PF02153 Prephenate dehydrogenase LW858_12935 PF00155 Aminotransferase class I and II LW858_12940 PF01264 Chorismate synthase LW858_12945 PF00793 DAHP synthetase I family LW858_12945 PF01817 Chorismate mutase type II LW858_12965 PF01636 Phosphotransferase enzyme family LW858_12995 PF01476 LysM domain LW858_12995 PF06725 3D domain LW858_13005 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LW858_13030 PF06039 Malate:quinone oxidoreductase (Mqo) LW858_13035 PF13407 Periplasmic binding protein domain LW858_13040 PF02653 Branched-chain amino acid transport system / permease component LW858_13045 PF02653 Branched-chain amino acid transport system / permease component LW858_13050 PF00005 ABC transporter LW858_13055 PF04198 Putative sugar-binding domain LW858_13055 PF00325 Bacterial regulatory proteins, crp family LW858_13060 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LW858_13060 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LW858_13070 PF01791 DeoC/LacD family aldolase LW858_13080 PF03992 Antibiotic biosynthesis monooxygenase LW858_13100 PF07662 Na+ dependent nucleoside transporter C-terminus LW858_13100 PF01773 Na+ dependent nucleoside transporter N-terminus LW858_13105 PF00171 Aldehyde dehydrogenase family LW858_13110 PF00696 Amino acid kinase family LW858_13110 PF01472 PUA domain LW858_13115 PF14748 Pyrroline-5-carboxylate reductase dimerisation LW858_13115 PF03807 NADP oxidoreductase coenzyme F420-dependent LW858_13120 PF01546 Peptidase family M20/M25/M40 LW858_13125 PF01614 Bacterial transcriptional regulator LW858_13125 PF09339 IclR helix-turn-helix domain LW858_13130 PF00324 Amino acid permease LW858_13140 PF00487 Fatty acid desaturase LW858_13145 PF05547 Immune inhibitor A peptidase M6 LW858_13150 PF04294 VanW like protein LW858_13155 PF00245 Alkaline phosphatase LW858_13160 PF11188 Protein of unknown function (DUF2975) LW858_13165 PF13443 Cro/C1-type HTH DNA-binding domain LW858_13185 PF13302 Acetyltransferase (GNAT) domain LW858_13190 PF12681 Glyoxalase-like domain LW858_13210 PF07726 ATPase family associated with various cellular activities (AAA) LW858_13210 PF17863 AAA lid domain LW858_13225 PF07690 Major Facilitator Superfamily LW858_13235 PF00535 Glycosyl transferase family 2 LW858_13255 PF00535 Glycosyl transferase family 2 LW858_13260 PF00535 Glycosyl transferase family 2 LW858_13280 PF01348 Type II intron maturase LW858_13280 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LW858_13285 PF00202 Aminotransferase class-III LW858_13290 PF00199 Catalase LW858_13290 PF06628 Catalase-related immune-responsive LW858_13295 PF18496 Collagenase G catalytic helper subdomain LW858_13295 PF01752 Collagenase LW858_13295 PF04151 Bacterial pre-peptidase C-terminal domain LW858_13295 PF08453 Peptidase family M9 N-terminal LW858_13305 PF13382 Adenine deaminase C-terminal domain LW858_13305 PF01979 Amidohydrolase family LW858_13310 PF00144 Beta-lactamase LW858_13330 PF17863 AAA lid domain LW858_13330 PF07726 ATPase family associated with various cellular activities (AAA) LW858_13385 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family LW858_13405 PF04740 LXG domain of WXG superfamily LW858_13405 PF14436 Bacterial EndoU nuclease LW858_13425 PF00881 Nitroreductase family LW858_13430 PF01047 MarR family LW858_13435 PF00679 Elongation factor G C-terminus LW858_13435 PF14492 Elongation Factor G, domain II LW858_13435 PF00009 Elongation factor Tu GTP binding domain LW858_13435 PF03764 Elongation factor G, domain IV LW858_13445 PF00293 NUDIX domain LW858_13450 PF05406 WGR domain LW858_13460 PF00005 ABC transporter LW858_13485 PF12833 Helix-turn-helix domain LW858_13490 PF00583 Acetyltransferase (GNAT) family LW858_13505 PF00892 EamA-like transporter family LW858_13510 PF00155 Aminotransferase class I and II LW858_13510 PF00392 Bacterial regulatory proteins, gntR family LW858_13515 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LW858_13520 PF13031 Protein of unknown function (DUF3892) LW858_13540 PF13673 Acetyltransferase (GNAT) domain LW858_13540 PF04229 GrpB protein LW858_13560 PF01925 Sulfite exporter TauE/SafE LW858_13570 PF00324 Amino acid permease LW858_13580 PF08713 DNA alkylation repair enzyme LW858_13600 PF00293 NUDIX domain LW858_13605 PF04989 Cephalosporin hydroxylase LW858_13610 PF10502 Signal peptidase, peptidase S26 LW858_13615 PF00905 Penicillin binding protein transpeptidase domain LW858_13615 PF03717 Penicillin-binding Protein dimerisation domain LW858_13625 PF02146 Sir2 family LW858_13630 PF01470 Pyroglutamyl peptidase LW858_13645 PF03746 LamB/YcsF family LW858_13650 PF02626 Carboxyltransferase domain, subdomain A and B LW858_13655 PF02682 Carboxyltransferase domain, subdomain C and D LW858_13660 PF09339 IclR helix-turn-helix domain LW858_13660 PF01614 Bacterial transcriptional regulator LW858_13665 PF10502 Signal peptidase, peptidase S26 LW858_13670 PF03932 CutC family LW858_13685 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LW858_13685 PF02770 Acyl-CoA dehydrogenase, middle domain LW858_13685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LW858_13700 PF07670 Nucleoside recognition LW858_13715 PF10903 Protein of unknown function (DUF2691) LW858_13720 PF02915 Rubrerythrin LW858_13735 PF00440 Bacterial regulatory proteins, tetR family LW858_13740 PF05547 Immune inhibitor A peptidase M6 LW858_13750 PF13610 DDE domain LW858_13760 PF03073 TspO/MBR family LW858_13765 PF00875 DNA photolyase LW858_13765 PF03441 FAD binding domain of DNA photolyase LW858_13795 PF00005 ABC transporter LW858_13800 PF05025 RbsD / FucU transport protein family LW858_13805 PF00356 Bacterial regulatory proteins, lacI family LW858_13810 PF01451 Low molecular weight phosphotyrosine protein phosphatase LW858_13815 PF01758 Sodium Bile acid symporter family LW858_13820 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LW858_13825 PF01022 Bacterial regulatory protein, arsR family LW858_13835 PF01872 RibD C-terminal domain LW858_13840 PF07993 Male sterility protein LW858_13840 PF00550 Phosphopantetheine attachment site LW858_13845 PF18665 Tetracyclin repressor-like, C-terminal domain LW858_13845 PF00440 Bacterial regulatory proteins, tetR family LW858_13855 PF01037 Lrp/AsnC ligand binding domain LW858_13870 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LW858_13910 PF00144 Beta-lactamase LW858_13915 PF00144 Beta-lactamase LW858_13930 PF12802 MarR family LW858_13965 PF00486 Transcriptional regulatory protein, C terminal LW858_13965 PF00072 Response regulator receiver domain LW858_13970 PF00672 HAMP domain LW858_13970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_13970 PF00512 His Kinase A (phospho-acceptor) domain LW858_14000 PF00072 Response regulator receiver domain LW858_14000 PF00196 Bacterial regulatory proteins, luxR family LW858_14020 PF00067 Cytochrome P450 LW858_14020 PF00175 Oxidoreductase NAD-binding domain LW858_14020 PF00258 Flavodoxin LW858_14020 PF00667 FAD binding domain LW858_14025 PF07690 Major Facilitator Superfamily LW858_14045 PF00291 Pyridoxal-phosphate dependent enzyme LW858_14055 PF00144 Beta-lactamase LW858_14060 PF04072 Leucine carboxyl methyltransferase LW858_14070 PF00005 ABC transporter LW858_14075 PF02687 FtsX-like permease family LW858_14095 PF00672 HAMP domain LW858_14095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_14095 PF00512 His Kinase A (phospho-acceptor) domain LW858_14100 PF00486 Transcriptional regulatory protein, C terminal LW858_14100 PF00072 Response regulator receiver domain LW858_14105 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LW858_14105 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LW858_14130 PF17676 LD-carboxypeptidase C-terminal domain LW858_14130 PF02016 LD-carboxypeptidase N-terminal domain LW858_14150 PF01842 ACT domain LW858_14150 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LW858_14150 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LW858_14155 PF00266 Aminotransferase class-V LW858_14170 PF07883 Cupin domain LW858_14175 PF12833 Helix-turn-helix domain LW858_14175 PF01497 Periplasmic binding protein LW858_14180 PF01804 Penicillin amidase LW858_14195 PF01476 LysM domain LW858_14195 PF01510 N-acetylmuramoyl-L-alanine amidase LW858_14195 PF01471 Putative peptidoglycan binding domain LW858_14385 PF04634 Protein of unknown function, DUF600 LW858_14410 PF01609 Transposase DDE domain LW858_14435 PF01609 Transposase DDE domain LW858_14440 PF09346 SMI1 / KNR4 family (SUKH-1) LW858_14495 PF02557 D-alanyl-D-alanine carboxypeptidase LW858_14500 PF09587 Bacterial capsule synthesis protein PGA_cap LW858_14505 PF14044 NETI protein LW858_14510 PF07690 Major Facilitator Superfamily LW858_14520 PF12697 Alpha/beta hydrolase family LW858_14525 PF01047 MarR family LW858_14530 PF07690 Major Facilitator Superfamily LW858_14545 PF12679 ABC-2 family transporter protein LW858_14550 PF00005 ABC transporter LW858_14550 PF13732 Domain of unknown function (DUF4162) LW858_14555 PF13396 Phospholipase_D-nuclease N-terminal LW858_14565 PF17314 Family of unknown function (DUF5360) LW858_14570 PF00893 Small Multidrug Resistance protein LW858_14575 PF00440 Bacterial regulatory proteins, tetR family LW858_14595 PF02667 Short chain fatty acid transporter LW858_14605 PF02525 Flavodoxin-like fold LW858_14625 PF14256 YwiC-like protein LW858_14635 PF00005 ABC transporter LW858_14655 PF03737 Aldolase/RraA LW858_14660 PF03606 C4-dicarboxylate anaerobic carrier LW858_14665 PF04231 Endonuclease I LW858_14685 PF04073 Aminoacyl-tRNA editing domain LW858_14710 PF01638 HxlR-like helix-turn-helix LW858_14715 PF00881 Nitroreductase family LW858_14725 PF02887 Pyruvate kinase, alpha/beta domain LW858_14725 PF00391 PEP-utilising enzyme, mobile domain LW858_14725 PF00224 Pyruvate kinase, barrel domain LW858_14760 PF00005 ABC transporter LW858_14785 PF13419 Haloacid dehalogenase-like hydrolase LW858_14795 PF13350 Tyrosine phosphatase family LW858_14820 PF13344 Haloacid dehalogenase-like hydrolase LW858_14820 PF00293 NUDIX domain LW858_14825 PF00579 tRNA synthetases class I (W and Y) LW858_14835 PF01594 AI-2E family transporter LW858_14895 PF03471 Transporter associated domain LW858_14895 PF00571 CBS domain LW858_14895 PF01595 Cyclin M transmembrane N-terminal domain LW858_14900 PF13411 MerR HTH family regulatory protein LW858_14905 PF00892 EamA-like transporter family LW858_14915 PF00805 Pentapeptide repeats (8 copies) LW858_14920 PF06906 Protein of unknown function (DUF1272) LW858_14925 PF10282 Lactonase, 7-bladed beta-propeller LW858_14930 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LW858_14930 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LW858_14940 PF00923 Transaldolase/Fructose-6-phosphate aldolase LW858_14945 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LW858_14945 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LW858_14950 PF02779 Transketolase, pyrimidine binding domain LW858_14950 PF02780 Transketolase, C-terminal domain LW858_14950 PF00456 Transketolase, thiamine diphosphate binding domain LW858_14955 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LW858_14955 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LW858_14960 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LW858_14960 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LW858_14965 PF00107 Zinc-binding dehydrogenase LW858_14965 PF08240 Alcohol dehydrogenase GroES-like domain LW858_14970 PF00296 Luciferase-like monooxygenase LW858_14975 PF16197 Ketoacyl-synthetase C-terminal extension LW858_14975 PF00107 Zinc-binding dehydrogenase LW858_14975 PF14765 Polyketide synthase dehydratase LW858_14975 PF08659 KR domain LW858_14975 PF00550 Phosphopantetheine attachment site LW858_14975 PF02801 Beta-ketoacyl synthase, C-terminal domain LW858_14975 PF08240 Alcohol dehydrogenase GroES-like domain LW858_14975 PF00109 Beta-ketoacyl synthase, N-terminal domain LW858_14975 PF00698 Acyl transferase domain LW858_14980 PF00106 short chain dehydrogenase LW858_14985 PF01447 Thermolysin metallopeptidase, catalytic domain LW858_14985 PF03413 Peptidase propeptide and YPEB domain LW858_14985 PF07504 Fungalysin/Thermolysin Propeptide Motif LW858_14985 PF02868 Thermolysin metallopeptidase, alpha-helical domain LW858_15000 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) LW858_15010 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LW858_15010 PF00925 GTP cyclohydrolase II LW858_15015 PF01638 HxlR-like helix-turn-helix LW858_15035 PF00248 Aldo/keto reductase family LW858_15040 PF07690 Major Facilitator Superfamily LW858_15050 PF03928 Haem-degrading LW858_15095 PF03960 ArsC family LW858_15100 PF01638 HxlR-like helix-turn-helix LW858_15105 PF00392 Bacterial regulatory proteins, gntR family LW858_15105 PF07702 UTRA domain LW858_15110 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LW858_15110 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LW858_15120 PF01638 HxlR-like helix-turn-helix LW858_15125 PF01638 HxlR-like helix-turn-helix LW858_15130 PF00248 Aldo/keto reductase family LW858_15165 PF02567 Phenazine biosynthesis-like protein LW858_15175 PF13193 AMP-binding enzyme C-terminal domain LW858_15175 PF00501 AMP-binding enzyme LW858_15180 PF02525 Flavodoxin-like fold LW858_15185 PF01638 HxlR-like helix-turn-helix LW858_15195 PF01022 Bacterial regulatory protein, arsR family LW858_15205 PF12791 Anti-sigma factor N-terminus LW858_15210 PF04542 Sigma-70 region 2 LW858_15215 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 LW858_15215 PF00535 Glycosyl transferase family 2 LW858_15220 PF01810 LysE type translocator LW858_15250 PF01061 ABC-2 type transporter LW858_15255 PF00005 ABC transporter LW858_15255 PF13732 Domain of unknown function (DUF4162) LW858_15280 PF05593 RHS Repeat LW858_15295 PF03063 Prismane/CO dehydrogenase family LW858_15355 PF00753 Metallo-beta-lactamase superfamily LW858_15360 PF00324 Amino acid permease LW858_15370 PF07690 Major Facilitator Superfamily LW858_15390 PF02585 GlcNAc-PI de-N-acetylase LW858_15395 PF08830 Protein of unknown function (DUF1806) LW858_15400 PF03600 Citrate transporter LW858_15415 PF01497 Periplasmic binding protein LW858_15420 PF01032 FecCD transport family LW858_15425 PF01032 FecCD transport family LW858_15430 PF05675 Protein of unknown function (DUF817) LW858_15435 PF13170 Protein of unknown function (DUF4003) LW858_15450 PF13302 Acetyltransferase (GNAT) domain LW858_15455 PF10901 Protein of unknown function (DUF2690) LW858_15465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LW858_15465 PF03466 LysR substrate binding domain LW858_15470 PF00107 Zinc-binding dehydrogenase LW858_15470 PF08240 Alcohol dehydrogenase GroES-like domain LW858_15485 PF01713 Smr domain LW858_15485 PF00488 MutS domain V LW858_15495 PF00128 Alpha amylase, catalytic domain LW858_15495 PF09154 Domain of unknown function (DUF1939) LW858_15500 PF00797 N-acetyltransferase LW858_15505 PF08439 Oligopeptidase F LW858_15505 PF01432 Peptidase family M3 LW858_15510 PF04371 Porphyromonas-type peptidyl-arginine deiminase LW858_15515 PF07969 Amidohydrolase family LW858_15530 PF01062 Bestrophin, RFP-TM, chloride channel LW858_15535 PF06146 Phosphate-starvation-inducible E LW858_15540 PF04371 Porphyromonas-type peptidyl-arginine deiminase LW858_15545 PF00144 Beta-lactamase LW858_15560 PF03466 LysR substrate binding domain LW858_15560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LW858_15570 PF03009 Glycerophosphoryl diester phosphodiesterase family LW858_15575 PF01494 FAD binding domain LW858_15580 PF01022 Bacterial regulatory protein, arsR family LW858_15585 PF08240 Alcohol dehydrogenase GroES-like domain LW858_15585 PF00107 Zinc-binding dehydrogenase LW858_15590 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LW858_15595 PF18801 response regulator aspartate phosphatase H, N terminal LW858_15595 PF17874 MalT-like TPR region LW858_15605 PF04299 Putative FMN-binding domain LW858_15610 PF04229 GrpB protein LW858_15625 PF02913 FAD linked oxidases, C-terminal domain LW858_15625 PF01565 FAD binding domain LW858_15650 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LW858_15650 PF01348 Type II intron maturase LW858_15670 PF18496 Collagenase G catalytic helper subdomain LW858_15670 PF01752 Collagenase LW858_15670 PF08453 Peptidase family M9 N-terminal LW858_15675 PF02308 MgtC family LW858_15685 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LW858_15690 PF04294 VanW like protein LW858_15700 PF13037 Domain of unknown function (DUF3898) LW858_15700 PF13039 Protein of unknown function (DUF3900) LW858_15725 PF01510 N-acetylmuramoyl-L-alanine amidase LW858_15725 PF13457 GW (Gly-Tryp) dipeptide domain LW858_15855 PF01548 Transposase LW858_15855 PF02371 Transposase IS116/IS110/IS902 family LW858_15875 PF00145 C-5 cytosine-specific DNA methylase LW858_15900 PF02511 Thymidylate synthase complementing protein LW858_15920 PF02075 Crossover junction endodeoxyribonuclease RuvC LW858_15935 PF00269 Small, acid-soluble spore proteins, alpha/beta type LW858_15950 PF01367 5'-3' exonuclease, C-terminal SAM fold LW858_15950 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LW858_15950 PF00476 DNA polymerase family A LW858_16005 PF00082 Subtilase family LW858_16010 PF07319 Primosomal protein DnaI N-terminus LW858_16010 PF01695 IstB-like ATP binding protein LW858_16040 PF14659 Phage integrase, N-terminal SAM-like domain LW858_16040 PF00589 Phage integrase family LW858_16060 PF00313 'Cold-shock' DNA-binding domain LW858_16070 PF00258 Flavodoxin LW858_16080 PF00293 NUDIX domain LW858_16090 PF00132 Bacterial transferase hexapeptide (six repeats) LW858_16100 PF00106 short chain dehydrogenase LW858_16110 PF14698 Argininosuccinate lyase C-terminal LW858_16110 PF00206 Lyase LW858_16120 PF01156 Inosine-uridine preferring nucleoside hydrolase LW858_16125 PF00474 Sodium:solute symporter family LW858_16135 PF00171 Aldehyde dehydrogenase family LW858_16145 PF14151 YfhD-like protein LW858_16150 PF13249 Squalene-hopene cyclase N-terminal domain LW858_16150 PF13243 Squalene-hopene cyclase C-terminal domain LW858_16155 PF02681 Divergent PAP2 family LW858_16160 PF00892 EamA-like transporter family LW858_16165 PF06961 Protein of unknown function (DUF1294) LW858_16180 PF10609 NUBPL iron-transfer P-loop NTPase LW858_16190 PF02391 MoaE protein LW858_16195 PF00994 Probable molybdopterin binding domain LW858_16195 PF03454 MoeA C-terminal region (domain IV) LW858_16195 PF03453 MoeA N-terminal region (domain I and II) LW858_16200 PF00899 ThiF family LW858_16205 PF01226 Formate/nitrite transporter LW858_16210 PF06463 Molybdenum Cofactor Synthesis C LW858_16210 PF04055 Radical SAM superfamily LW858_16215 PF02634 FdhD/NarQ family LW858_16220 PF10057 Uncharacterized conserved protein (DUF2294) LW858_16225 PF07849 Protein of unknown function (DUF1641) LW858_16230 PF01568 Molydopterin dinucleotide binding domain LW858_16230 PF00037 4Fe-4S binding domain LW858_16230 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LW858_16230 PF00384 Molybdopterin oxidoreductase LW858_16230 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LW858_16235 PF03323 Bacillus/Clostridium GerA spore germination protein LW858_16250 PF13520 Amino acid permease LW858_16285 PF08241 Methyltransferase domain LW858_16290 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LW858_16295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LW858_16300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LW858_16305 PF00375 Sodium:dicarboxylate symporter family LW858_16310 PF03816 Cell envelope-related transcriptional attenuator domain LW858_16320 PF04542 Sigma-70 region 2 LW858_16320 PF08281 Sigma-70, region 4 LW858_16330 PF13732 Domain of unknown function (DUF4162) LW858_16330 PF00005 ABC transporter LW858_16350 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LW858_16350 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LW858_16355 PF00521 DNA gyrase/topoisomerase IV, subunit A LW858_16355 PF03989 DNA gyrase C-terminal domain, beta-propeller LW858_16360 PF01751 Toprim domain LW858_16360 PF00204 DNA gyrase B LW858_16360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_16360 PF00986 DNA gyrase B subunit, carboxyl terminus LW858_16365 PF13380 CoA binding domain LW858_16370 PF13180 PDZ domain LW858_16375 PF00072 Response regulator receiver domain LW858_16375 PF00486 Transcriptional regulatory protein, C terminal LW858_16380 PF04055 Radical SAM superfamily LW858_16385 PF13597 Anaerobic ribonucleoside-triphosphate reductase LW858_16385 PF03477 ATP cone domain LW858_16390 PF02660 Glycerol-3-phosphate acyltransferase LW858_16395 PF01521 Iron-sulphur cluster biosynthesis LW858_16400 PF03061 Thioesterase superfamily LW858_16410 PF08177 Small acid-soluble spore protein N family LW858_16415 PF13040 Fur-regulated basic protein B LW858_16420 PF14579 Helix-hairpin-helix motif LW858_16420 PF11490 DNA polymerase III polC-type N-terminus II LW858_16420 PF07733 Bacterial DNA polymerase III alpha NTPase domain LW858_16420 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LW858_16420 PF01336 OB-fold nucleic acid binding domain LW858_16420 PF02811 PHP domain LW858_16420 PF00929 Exonuclease LW858_16425 PF00578 AhpC/TSA family LW858_16445 PF00330 Aconitase family (aconitate hydratase) LW858_16445 PF00694 Aconitase C-terminal domain LW858_16455 PF01522 Polysaccharide deacetylase LW858_16465 PF08179 Small acid-soluble spore protein P family LW858_16475 PF07690 Major Facilitator Superfamily LW858_16485 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LW858_16485 PF01411 tRNA synthetases class II (A) LW858_16485 PF02272 DHHA1 domain LW858_16490 PF00293 NUDIX domain LW858_16490 PF13344 Haloacid dehalogenase-like hydrolase LW858_16500 PF02803 Thiolase, C-terminal domain LW858_16500 PF00108 Thiolase, N-terminal domain LW858_16505 PF13193 AMP-binding enzyme C-terminal domain LW858_16505 PF00501 AMP-binding enzyme LW858_16510 PF02632 BioY family LW858_16515 PF00501 AMP-binding enzyme LW858_16515 PF13193 AMP-binding enzyme C-terminal domain LW858_16520 PF01381 Helix-turn-helix LW858_16525 PF02371 Transposase IS116/IS110/IS902 family LW858_16525 PF01548 Transposase LW858_16535 PF05532 CsbD-like LW858_16555 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LW858_16555 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LW858_16565 PF13188 PAS domain LW858_16565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_16565 PF13426 PAS domain LW858_16565 PF00512 His Kinase A (phospho-acceptor) domain LW858_16565 PF00989 PAS fold LW858_16570 PF01738 Dienelactone hydrolase family LW858_16575 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LW858_16580 PF00474 Sodium:solute symporter family LW858_16590 PF01645 Conserved region in glutamate synthase LW858_16595 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LW858_16600 PF02559 CarD-like/TRCF domain LW858_16610 PF00491 Arginase family LW858_16615 PF01979 Amidohydrolase family LW858_16620 PF01175 Urocanase Rossmann-like domain LW858_16620 PF17392 Urocanase C-terminal domain LW858_16620 PF17391 Urocanase N-terminal domain LW858_16625 PF00221 Aromatic amino acid lyase LW858_16630 PF09021 HutP LW858_16655 PF11084 Protein of unknown function (DUF2621) LW858_16660 PF07301 Protein of unknown function (DUF1453) LW858_16665 PF02683 Cytochrome C biogenesis protein transmembrane region LW858_16675 PF01546 Peptidase family M20/M25/M40 LW858_16675 PF07687 Peptidase dimerisation domain LW858_16685 PF00005 ABC transporter LW858_16700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LW858_16700 PF03466 LysR substrate binding domain LW858_16705 PF03788 LrgA family LW858_16710 PF04172 LrgB-like family LW858_16720 PF13344 Haloacid dehalogenase-like hydrolase LW858_16720 PF00293 NUDIX domain LW858_16730 PF01925 Sulfite exporter TauE/SafE LW858_16750 PF01183 Glycosyl hydrolases family 25 LW858_16750 PF08239 Bacterial SH3 domain LW858_16755 PF00005 ABC transporter LW858_16755 PF00664 ABC transporter transmembrane region LW858_16760 PF00005 ABC transporter LW858_16760 PF00664 ABC transporter transmembrane region LW858_16765 PF03672 Uncharacterised protein family (UPF0154) LW858_16770 PF10747 Sporulation inhibitor of replication protein SirA LW858_16775 PF02779 Transketolase, pyrimidine binding domain LW858_16775 PF02780 Transketolase, C-terminal domain LW858_16775 PF00456 Transketolase, thiamine diphosphate binding domain LW858_16780 PF00528 Binding-protein-dependent transport system inner membrane component LW858_16805 PF00497 Bacterial extracellular solute-binding proteins, family 3 LW858_16810 PF02872 5'-nucleotidase, C-terminal domain LW858_16810 PF00149 Calcineurin-like phosphoesterase LW858_16815 PF05979 Bacterial protein of unknown function (DUF896) LW858_16820 PF00239 Resolvase, N terminal domain LW858_16825 PF01726 LexA DNA binding domain LW858_16825 PF00717 Peptidase S24-like LW858_16840 PF03551 Transcriptional regulator PadR-like family LW858_16850 PF01471 Putative peptidoglycan binding domain LW858_16850 PF01476 LysM domain LW858_16850 PF01510 N-acetylmuramoyl-L-alanine amidase LW858_16855 PF04225 Opacity-associated protein A LysM-like domain LW858_16855 PF01551 Peptidase family M23 LW858_16895 PF01726 LexA DNA binding domain LW858_16895 PF00717 Peptidase S24-like LW858_16900 PF00120 Glutamine synthetase, catalytic domain LW858_16900 PF03951 Glutamine synthetase, beta-Grasp domain LW858_16905 PF13411 MerR HTH family regulatory protein LW858_16910 PF06838 Methionine gamma-lyase LW858_16915 PF01926 50S ribosome-binding GTPase LW858_16915 PF13167 GTP-binding GTPase N-terminal LW858_16915 PF16360 GTP-binding GTPase Middle Region LW858_16920 PF03458 UPF0126 domain LW858_16930 PF00004 ATPase family associated with various cellular activities (AAA) LW858_16930 PF17866 AAA lid domain LW858_16950 PF17209 Hfq protein LW858_16965 PF06725 3D domain LW858_16965 PF01476 LysM domain LW858_16970 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LW858_16970 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LW858_16975 PF00294 pfkB family carbohydrate kinase LW858_16980 PF08220 DeoR-like helix-turn-helix domain LW858_16980 PF00455 DeoR C terminal sensor domain LW858_16985 PF00465 Iron-containing alcohol dehydrogenase LW858_16990 PF04238 Protein of unknown function (DUF420) LW858_17000 PF00324 Amino acid permease LW858_17005 PF00041 Fibronectin type III domain LW858_17005 PF00704 Glycosyl hydrolases family 18 LW858_17010 PF10518 TAT (twin-arginine translocation) pathway signal sequence LW858_17010 PF00149 Calcineurin-like phosphoesterase LW858_17015 PF01226 Formate/nitrite transporter LW858_17020 PF00216 Bacterial DNA-binding protein LW858_17035 PF00403 Heavy-metal-associated domain LW858_17040 PF00403 Heavy-metal-associated domain LW858_17045 PF02583 Metal-sensitive transcriptional repressor LW858_17055 PF00756 Putative esterase LW858_17060 PF00005 ABC transporter LW858_17065 PF01032 FecCD transport family LW858_17070 PF01032 FecCD transport family LW858_17075 PF01497 Periplasmic binding protein LW858_17080 PF03372 Endonuclease/Exonuclease/phosphatase family LW858_17085 PF02805 Metal binding domain of Ada LW858_17085 PF12833 Helix-turn-helix domain LW858_17090 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LW858_17090 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LW858_17095 PF00730 HhH-GPD superfamily base excision DNA repair protein LW858_17095 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain LW858_17100 PF01546 Peptidase family M20/M25/M40 LW858_17100 PF07687 Peptidase dimerisation domain LW858_17115 PF00561 alpha/beta hydrolase fold LW858_17120 PF00990 Diguanylate cyclase, GGDEF domain LW858_17120 PF03707 Bacterial signalling protein N terminal repeat LW858_17120 PF00563 EAL domain LW858_17130 PF03033 Glycosyltransferase family 28 N-terminal domain LW858_17130 PF04101 Glycosyltransferase family 28 C-terminal domain LW858_17140 PF16363 GDP-mannose 4,6 dehydratase LW858_17145 PF02719 Polysaccharide biosynthesis protein LW858_17145 PF08485 Polysaccharide biosynthesis protein C-terminal LW858_17160 PF10787 Uncharacterised protein from bacillus cereus group LW858_17165 PF04172 LrgB-like family LW858_17170 PF03788 LrgA family LW858_17175 PF00392 Bacterial regulatory proteins, gntR family LW858_17175 PF00155 Aminotransferase class I and II LW858_17185 PF00392 Bacterial regulatory proteins, gntR family LW858_17185 PF07702 UTRA domain LW858_17190 PF00232 Glycosyl hydrolase family 1 LW858_17195 PF00388 Phosphatidylinositol-specific phospholipase C, X domain LW858_17215 PF07486 Cell Wall Hydrolase LW858_17225 PF00884 Sulfatase LW858_17230 PF00350 Dynamin family LW858_17240 PF08676 MutL C terminal dimerisation domain LW858_17240 PF01119 DNA mismatch repair protein, C-terminal domain LW858_17245 PF01624 MutS domain I LW858_17245 PF05188 MutS domain II LW858_17245 PF05192 MutS domain III LW858_17245 PF00488 MutS domain V LW858_17245 PF05190 MutS family domain IV LW858_17250 PF10628 Outer spore coat protein E (CotE) LW858_17255 PF06133 Control of competence regulator ComK, YlbF/YmcA LW858_17260 PF01938 TRAM domain LW858_17260 PF04055 Radical SAM superfamily LW858_17260 PF00919 Uncharacterized protein family UPF0004 LW858_17265 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LW858_17270 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II LW858_17270 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg LW858_17270 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase LW858_17275 PF01244 Membrane dipeptidase (Peptidase family M19) LW858_17280 PF04232 Stage V sporulation protein S (SpoVS) LW858_17285 PF13277 YmdB-like protein LW858_17290 PF01966 HD domain LW858_17290 PF00013 KH domain LW858_17290 PF12072 Domain of unknown function (DUF3552) LW858_17295 PF00154 recA bacterial DNA recombination protein LW858_17300 PF00994 Probable molybdopterin binding domain LW858_17300 PF02464 Competence-damaged protein LW858_17300 PF18146 Damage-inducible protein CinA KH domain LW858_17305 PF01066 CDP-alcohol phosphatidyltransferase LW858_17310 PF13464 Domain of unknown function (DUF4115) LW858_17315 PF11868 Protein of unknown function (DUF3388) LW858_17320 PF11588 Protein of unknown function (DUF3243) LW858_17330 PF00675 Insulinase (Peptidase family M16) LW858_17330 PF05193 Peptidase M16 inactive domain LW858_17335 PF05193 Peptidase M16 inactive domain LW858_17340 PF02653 Branched-chain amino acid transport system / permease component LW858_17345 PF02653 Branched-chain amino acid transport system / permease component LW858_17350 PF00005 ABC transporter LW858_17355 PF02608 ABC transporter substrate-binding protein PnrA-like LW858_17360 PF07702 UTRA domain LW858_17360 PF00392 Bacterial regulatory proteins, gntR family LW858_17365 PF01580 FtsK/SpoIIIE family LW858_17365 PF17854 FtsK alpha domain LW858_17365 PF09397 Ftsk gamma domain LW858_17370 PF14035 YlzJ-like protein LW858_17375 PF00574 Clp protease LW858_17385 PF17770 Ribonuclease J C-terminal domain LW858_17385 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LW858_17385 PF00753 Metallo-beta-lactamase superfamily LW858_17390 PF00701 Dihydrodipicolinate synthetase family LW858_17395 PF00696 Amino acid kinase family LW858_17395 PF13840 ACT domain LW858_17400 PF01118 Semialdehyde dehydrogenase, NAD binding domain LW858_17400 PF02774 Semialdehyde dehydrogenase, dimerisation domain LW858_17405 PF02441 Flavoprotein LW858_17410 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LW858_17410 PF16924 Dipicolinate synthase subunit A N-terminal domain LW858_17415 PF05239 PRC-barrel domain LW858_17420 PF05193 Peptidase M16 inactive domain LW858_17420 PF00675 Insulinase (Peptidase family M16) LW858_17425 PF01522 Polysaccharide deacetylase LW858_17430 PF00013 KH domain LW858_17430 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LW858_17430 PF01138 3' exoribonuclease family, domain 1 LW858_17430 PF03725 3' exoribonuclease family, domain 2 LW858_17430 PF00575 S1 RNA binding domain LW858_17435 PF00312 Ribosomal protein S15 LW858_17440 PF06574 FAD synthetase LW858_17440 PF01687 Riboflavin kinase LW858_17445 PF16198 tRNA pseudouridylate synthase B C-terminal domain LW858_17445 PF01509 TruB family pseudouridylate synthase (N terminal domain) LW858_17450 PF02033 Ribosome-binding factor A LW858_17455 PF04456 Protein of unknown function (DUF503) LW858_17460 PF00009 Elongation factor Tu GTP binding domain LW858_17460 PF11987 Translation-initiation factor 2 LW858_17460 PF04760 Translation initiation factor IF-2, N-terminal region LW858_17465 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family LW858_17470 PF04296 Protein of unknown function (DUF448) LW858_17475 PF13184 NusA-like KH domain LW858_17475 PF08529 NusA N-terminal domain LW858_17475 PF00575 S1 RNA binding domain LW858_17480 PF02576 RimP N-terminal domain LW858_17480 PF17384 RimP C-terminal SH3 domain LW858_17485 PF11490 DNA polymerase III polC-type N-terminus II LW858_17485 PF14480 DNA polymerase III polC-type N-terminus I LW858_17485 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LW858_17485 PF14579 Helix-hairpin-helix motif LW858_17485 PF02811 PHP domain LW858_17485 PF00929 Exonuclease LW858_17485 PF07733 Bacterial DNA polymerase III alpha NTPase domain LW858_17490 PF03129 Anticodon binding domain LW858_17490 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LW858_17490 PF04073 Aminoacyl-tRNA editing domain LW858_17495 PF17820 PDZ domain LW858_17495 PF02163 Peptidase family M50 LW858_17500 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LW858_17500 PF13288 DXP reductoisomerase C-terminal domain LW858_17500 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LW858_17510 PF01255 Putative undecaprenyl diphosphate synthase LW858_17515 PF01765 Ribosome recycling factor LW858_17520 PF00696 Amino acid kinase family LW858_17525 PF00889 Elongation factor TS LW858_17530 PF00318 Ribosomal protein S2 LW858_17535 PF08222 CodY helix-turn-helix domain LW858_17535 PF06018 CodY GAF-like domain LW858_17540 PF10431 C-terminal, D2-small domain, of ClpB protein LW858_17540 PF07724 AAA domain (Cdc48 subfamily) LW858_17540 PF00004 ATPase family associated with various cellular activities (AAA) LW858_17545 PF00227 Proteasome subunit LW858_17550 PF02899 Phage integrase, N-terminal SAM-like domain LW858_17550 PF00589 Phage integrase family LW858_17555 PF01134 Glucose inhibited division protein A LW858_17560 PF01396 Topoisomerase DNA binding C4 zinc finger LW858_17560 PF01751 Toprim domain LW858_17560 PF01131 DNA topoisomerase LW858_17565 PF02481 DNA recombination-mediator protein A LW858_17570 PF02629 CoA binding domain LW858_17570 PF00549 CoA-ligase LW858_17575 PF00549 CoA-ligase LW858_17575 PF08442 ATP-grasp domain LW858_17580 PF01351 Ribonuclease HII LW858_17585 PF01926 50S ribosome-binding GTPase LW858_17590 PF10502 Signal peptidase, peptidase S26 LW858_17595 PF01245 Ribosomal protein L19 LW858_17600 PF01746 tRNA (Guanine-1)-methyltransferase LW858_17605 PF05239 PRC-barrel domain LW858_17605 PF01782 RimM N-terminal domain LW858_17615 PF00886 Ribosomal protein S16 LW858_17620 PF02978 Signal peptide binding domain LW858_17620 PF02881 SRP54-type protein, helical bundle domain LW858_17620 PF00448 SRP54-type protein, GTPase domain LW858_17625 PF04297 Putative helix-turn-helix protein, YlxM / p13 like LW858_17630 PF00448 SRP54-type protein, GTPase domain LW858_17630 PF02881 SRP54-type protein, helical bundle domain LW858_17635 PF06470 SMC proteins Flexible Hinge Domain LW858_17635 PF02463 RecF/RecN/SMC N terminal domain LW858_17640 PF00035 Double-stranded RNA binding motif LW858_17640 PF14622 Ribonuclease-III-like LW858_17645 PF00550 Phosphopantetheine attachment site LW858_17655 PF00698 Acyl transferase domain LW858_17660 PF02504 Fatty acid synthesis protein LW858_17665 PF03061 Thioesterase superfamily LW858_17670 PF00271 Helicase conserved C-terminal domain LW858_17670 PF00270 DEAD/DEAH box helicase LW858_17670 PF17191 RecG wedge domain LW858_17675 PF13684 Dihydroxyacetone kinase family LW858_17675 PF02734 DAK2 domain LW858_17680 PF03780 Asp23 family, cell envelope-related function LW858_17685 PF00830 Ribosomal L28 family LW858_17690 PF08183 Stage V sporulation protein family LW858_17695 PF04263 Thiamin pyrophosphokinase, catalytic domain LW858_17695 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain LW858_17700 PF00834 Ribulose-phosphate 3 epimerase family LW858_17705 PF03193 RsgA GTPase LW858_17705 PF16745 RsgA N-terminal domain LW858_17710 PF03793 PASTA domain LW858_17710 PF00069 Protein kinase domain LW858_17720 PF04055 Radical SAM superfamily LW858_17725 PF01189 16S rRNA methyltransferase RsmB/F LW858_17725 PF01029 NusB family LW858_17730 PF02911 Formyl transferase, C-terminal domain LW858_17730 PF00551 Formyl transferase LW858_17735 PF01327 Polypeptide deformylase LW858_17740 PF04851 Type III restriction enzyme, res subunit LW858_17740 PF00271 Helicase conserved C-terminal domain LW858_17740 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LW858_17740 PF17764 3′ DNA-binding domain (3′BD) LW858_17740 PF18074 Primosomal protein N C-terminal domain LW858_17745 PF04127 DNA / pantothenate metabolism flavoprotein LW858_17745 PF02441 Flavoprotein LW858_17750 PF01192 RNA polymerase Rpb6 LW858_17755 PF00625 Guanylate kinase LW858_17760 PF04025 Domain of unknown function (DUF370) LW858_17765 PF03755 YicC-like family, N-terminal region LW858_17765 PF08340 Domain of unknown function (DUF1732) LW858_17770 PF00690 Cation transporter/ATPase, N-terminus LW858_17770 PF00689 Cation transporting ATPase, C-terminus LW858_17775 PF05670 NFACT protein RNA binding domain LW858_17780 PF01321 Creatinase/Prolidase N-terminal domain LW858_17780 PF00557 Metallopeptidase family M24 LW858_17805 PF00156 Phosphoribosyl transferase domain LW858_17810 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LW858_17815 PF01180 Dihydroorotate dehydrogenase LW858_17820 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B LW858_17825 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LW858_17825 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LW858_17825 PF02142 MGS-like domain LW858_17830 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LW858_17830 PF00117 Glutamine amidotransferase class-I LW858_17835 PF01979 Amidohydrolase family LW858_17840 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LW858_17840 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LW858_17845 PF00860 Permease family LW858_17850 PF00156 Phosphoribosyl transferase domain LW858_17855 PF00849 RNA pseudouridylate synthase LW858_17855 PF01479 S4 domain LW858_17860 PF01252 Signal peptidase (SPase) II LW858_17870 PF08264 Anticodon-binding domain of tRNA LW858_17870 PF00133 tRNA synthetases class I (I, L, M and V) LW858_17870 PF06827 Zinc finger found in FPG and IleRS LW858_17875 PF05103 DivIVA protein LW858_17880 PF01479 S4 domain LW858_17880 PF17774 Putative RNA-binding domain in YlmH LW858_17885 PF02325 YGGT family LW858_17890 PF04472 Cell division protein SepF LW858_17895 PF01168 Alanine racemase, N-terminal domain LW858_17900 PF02578 Multi-copper polyphenol oxidoreductase laccase LW858_17905 PF05239 PRC-barrel domain LW858_17910 PF04542 Sigma-70 region 2 LW858_17910 PF04539 Sigma-70 region 3 LW858_17910 PF04545 Sigma-70, region 4 LW858_17915 PF04545 Sigma-70, region 4 LW858_17915 PF04542 Sigma-70 region 2 LW858_17920 PF03419 Sporulation factor SpoIIGA LW858_17925 PF00091 Tubulin/FtsZ family, GTPase domain LW858_17925 PF12327 FtsZ family, C-terminal domain LW858_17930 PF02491 SHS2 domain inserted in FTSA LW858_17935 PF03799 Cell division protein FtsQ LW858_17935 PF08478 POTRA domain, FtsQ-type LW858_17940 PF01565 FAD binding domain LW858_17940 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LW858_17945 PF03033 Glycosyltransferase family 28 N-terminal domain LW858_17945 PF04101 Glycosyltransferase family 28 C-terminal domain LW858_17950 PF01098 Cell cycle protein LW858_17955 PF08245 Mur ligase middle domain LW858_17955 PF02875 Mur ligase family, glutamate ligase domain LW858_17960 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LW858_17960 PF00953 Glycosyl transferase family 4 LW858_17965 PF02875 Mur ligase family, glutamate ligase domain LW858_17965 PF01225 Mur ligase family, catalytic domain LW858_17965 PF08245 Mur ligase middle domain LW858_17970 PF00905 Penicillin binding protein transpeptidase domain LW858_17970 PF03793 PASTA domain LW858_17970 PF03717 Penicillin-binding Protein dimerisation domain LW858_17975 PF03793 PASTA domain LW858_17975 PF03717 Penicillin-binding Protein dimerisation domain LW858_17975 PF00905 Penicillin binding protein transpeptidase domain LW858_17980 PF04977 Septum formation initiator LW858_17985 PF01795 MraW methylase family LW858_17990 PF10079 Bacillithiol biosynthesis BshC LW858_17995 PF02558 Ketopantoate reductase PanE/ApbA LW858_17995 PF08546 Ketopantoate reductase PanE/ApbA C terminal LW858_18000 PF00583 Acetyltransferase (GNAT) family LW858_18015 PF01783 Ribosomal L32p protein family LW858_18020 PF02620 Large ribosomal RNA subunit accumulation protein YceD LW858_18025 PF05636 HIGH Nucleotidyl Transferase LW858_18030 PF05362 Lon protease (S16) C-terminal proteolytic domain LW858_18030 PF13180 PDZ domain LW858_18035 PF01734 Patatin-like phospholipase LW858_18040 PF07670 Nucleoside recognition LW858_18045 PF01467 Cytidylyltransferase-like LW858_18060 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) LW858_18065 PF06133 Control of competence regulator ComK, YlbF/YmcA LW858_18070 PF00300 Histidine phosphatase superfamily (branch 1) LW858_18075 PF14003 YlbE-like protein LW858_18080 PF14071 Putative coat protein LW858_18085 PF14504 CAP-associated N-terminal LW858_18085 PF00188 Cysteine-rich secretory protein family LW858_18090 PF08868 YugN-like family LW858_18095 PF00795 Carbon-nitrogen hydrolase LW858_18100 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) LW858_18105 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LW858_18110 PF00510 Cytochrome c oxidase subunit III LW858_18115 PF00115 Cytochrome C and Quinol oxidase polypeptide I LW858_18120 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LW858_18120 PF02790 Cytochrome C oxidase subunit II, transmembrane domain LW858_18120 PF00034 Cytochrome c LW858_18125 PF01040 UbiA prenyltransferase family LW858_18130 PF02628 Cytochrome oxidase assembly protein LW858_18140 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LW858_18140 PF00682 HMGL-like LW858_18140 PF00289 Biotin carboxylase, N-terminal domain LW858_18140 PF02436 Conserved carboxylase domain LW858_18140 PF00364 Biotin-requiring enzyme LW858_18140 PF02785 Biotin carboxylase C-terminal domain LW858_18145 PF01098 Cell cycle protein LW858_18150 PF07408 Protein of unknown function (DUF1507) LW858_18165 PF13638 PIN domain LW858_18165 PF02562 PhoH-like protein LW858_18175 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) LW858_18185 PF14036 YlaH-like protein LW858_18190 PF03144 Elongation factor Tu domain 2 LW858_18190 PF00009 Elongation factor Tu GTP binding domain LW858_18190 PF14492 Elongation Factor G, domain II LW858_18190 PF00679 Elongation factor G C-terminus LW858_18200 PF00459 Inositol monophosphatase family LW858_18210 PF06335 Protein of unknown function (DUF1054) LW858_18215 PF05256 Uncharacterised protein family (UPF0223) LW858_18220 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LW858_18220 PF01276 Orn/Lys/Arg decarboxylase, major domain LW858_18260 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LW858_18260 PF07992 Pyridine nucleotide-disulphide oxidoreductase LW858_18265 PF02817 e3 binding domain LW858_18265 PF00364 Biotin-requiring enzyme LW858_18265 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LW858_18270 PF02779 Transketolase, pyrimidine binding domain LW858_18270 PF02780 Transketolase, C-terminal domain LW858_18275 PF00676 Dehydrogenase E1 component LW858_18290 PF01327 Polypeptide deformylase LW858_18300 PF07288 Protein of unknown function (DUF1447) LW858_18305 PF00753 Metallo-beta-lactamase superfamily LW858_18305 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LW858_18305 PF17770 Ribonuclease J C-terminal domain LW858_18310 PF02080 TrkA-C domain LW858_18310 PF02254 TrkA-N domain LW858_18320 PF01546 Peptidase family M20/M25/M40 LW858_18320 PF07687 Peptidase dimerisation domain LW858_18325 PF00132 Bacterial transferase hexapeptide (six repeats) LW858_18325 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal LW858_18325 PF14602 Hexapeptide repeat of succinyl-transferase LW858_18330 PF03466 LysR substrate binding domain LW858_18330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LW858_18345 PF04308 Ribonuclease H-like LW858_18355 PF08796 Protein of unknown function (DUF1797) LW858_18375 PF10388 EAL-domain associated signalling protein domain LW858_18375 PF00563 EAL domain LW858_18385 PF10518 TAT (twin-arginine translocation) pathway signal sequence LW858_18385 PF00149 Calcineurin-like phosphoesterase LW858_18405 PF02541 Ppx/GppA phosphatase family LW858_18410 PF14177 YkyB-like protein LW858_18435 PF07690 Major Facilitator Superfamily LW858_18445 PF08267 Cobalamin-independent synthase, N-terminal domain LW858_18445 PF01717 Cobalamin-independent synthase, Catalytic domain LW858_18455 PF14040 Deoxyribonuclease NucA/NucB LW858_18465 PF00512 His Kinase A (phospho-acceptor) domain LW858_18465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_18475 PF00155 Aminotransferase class I and II LW858_18485 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LW858_18485 PF00356 Bacterial regulatory proteins, lacI family LW858_18490 PF00528 Binding-protein-dependent transport system inner membrane component LW858_18495 PF00528 Binding-protein-dependent transport system inner membrane component LW858_18500 PF13416 Bacterial extracellular solute-binding protein LW858_18505 PF02903 Alpha amylase, N-terminal ig-like domain LW858_18505 PF16657 Maltogenic Amylase, C-terminal domain LW858_18505 PF00128 Alpha amylase, catalytic domain LW858_18510 PF00128 Alpha amylase, catalytic domain LW858_18510 PF16657 Maltogenic Amylase, C-terminal domain LW858_18515 PF17912 MalK OB fold domain LW858_18515 PF00005 ABC transporter LW858_18515 PF03459 TOBE domain LW858_18565 PF02803 Thiolase, C-terminal domain LW858_18565 PF00108 Thiolase, N-terminal domain LW858_18570 PF00293 NUDIX domain LW858_18600 PF03551 Transcriptional regulator PadR-like family LW858_18615 PF01008 Initiation factor 2 subunit family LW858_18620 PF01636 Phosphotransferase enzyme family LW858_18625 PF00795 Carbon-nitrogen hydrolase LW858_18630 PF00155 Aminotransferase class I and II LW858_18635 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain LW858_18635 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain LW858_18645 PF00596 Class II Aldolase and Adducin N-terminal domain LW858_18650 PF03079 ARD/ARD' family LW858_18670 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LW858_18670 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LW858_18675 PF00144 Beta-lactamase LW858_18680 PF00990 Diguanylate cyclase, GGDEF domain LW858_18680 PF08448 PAS fold LW858_18685 PF00881 Nitroreductase family LW858_18700 PF02896 PEP-utilising enzyme, TIM barrel domain LW858_18700 PF05524 PEP-utilising enzyme, N-terminal LW858_18700 PF00391 PEP-utilising enzyme, mobile domain LW858_18705 PF00381 PTS HPr component phosphorylation site LW858_18710 PF02378 Phosphotransferase system, EIIC LW858_18710 PF00367 phosphotransferase system, EIIB LW858_18710 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LW858_18715 PF00874 PRD domain LW858_18715 PF03123 CAT RNA binding domain LW858_18725 PF00392 Bacterial regulatory proteins, gntR family LW858_18725 PF07702 UTRA domain LW858_18735 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LW858_18740 PF01979 Amidohydrolase family LW858_18750 PF04079 Segregation and condensation complex subunit ScpB LW858_18755 PF02616 Segregation and condensation protein ScpA LW858_18765 PF03745 Domain of unknown function (DUF309) LW858_18770 PF00583 Acetyltransferase (GNAT) family LW858_18780 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LW858_18785 PF06207 Protein of unknown function (DUF1002) LW858_18795 PF03323 Bacillus/Clostridium GerA spore germination protein LW858_18800 PF14097 Stage V sporulation protein AE1 LW858_18805 PF03862 SpoVAC/SpoVAEB sporulation membrane protein LW858_18810 PF07451 Stage V sporulation protein AD (SpoVAD) LW858_18815 PF03862 SpoVAC/SpoVAEB sporulation membrane protein LW858_18820 PF13782 Stage V sporulation protein AB LW858_18825 PF12164 Stage V sporulation protein AA LW858_18835 PF00209 Sodium:neurotransmitter symporter family LW858_18840 PF04542 Sigma-70 region 2 LW858_18840 PF04545 Sigma-70, region 4 LW858_18840 PF04539 Sigma-70 region 3 LW858_18845 PF13581 Histidine kinase-like ATPase domain LW858_18850 PF01740 STAS domain LW858_18855 PF07943 Penicillin-binding protein 5, C-terminal domain LW858_18855 PF00768 D-alanyl-D-alanine carboxypeptidase LW858_18860 PF00392 Bacterial regulatory proteins, gntR family LW858_18865 PF00005 ABC transporter LW858_18890 PF01047 MarR family LW858_18900 PF00860 Permease family LW858_18905 PF01544 CorA-like Mg2+ transporter protein LW858_18910 PF02885 Glycosyl transferase family, helical bundle domain LW858_18910 PF00591 Glycosyl transferase family, a/b domain LW858_18910 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain LW858_18915 PF01048 Phosphorylase superfamily LW858_18920 PF01676 Metalloenzyme superfamily LW858_18930 PF13115 YtkA-like LW858_18935 PF02899 Phage integrase, N-terminal SAM-like domain LW858_18935 PF00589 Phage integrase family LW858_18940 PF14004 Protein of unknown function (DUF4227) LW858_18945 PF01475 Ferric uptake regulator family LW858_18950 PF01944 Stage II sporulation protein M LW858_18965 PF00293 NUDIX domain LW858_18970 PF13072 Mother cell inhibitor of FtsZ LW858_18975 PF00248 Aldo/keto reductase family LW858_18980 PF00248 Aldo/keto reductase family LW858_18995 PF00565 Staphylococcal nuclease homologue LW858_18995 PF00149 Calcineurin-like phosphoesterase LW858_18995 PF02872 5'-nucleotidase, C-terminal domain LW858_18995 PF00746 LPXTG cell wall anchor motif LW858_19005 PF12146 Serine aminopeptidase, S33 LW858_19010 PF13726 Na+-H+ antiporter family LW858_19010 PF03553 Na+/H+ antiporter family LW858_19020 PF00356 Bacterial regulatory proteins, lacI family LW858_19025 PF00583 Acetyltransferase (GNAT) family LW858_19030 PF12146 Serine aminopeptidase, S33 LW858_19035 PF10827 Protein of unknown function (DUF2552) LW858_19045 PF01872 RibD C-terminal domain LW858_19045 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LW858_19050 PF00677 Lumazine binding domain LW858_19055 PF00925 GTP cyclohydrolase II LW858_19055 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LW858_19060 PF00885 6,7-dimethyl-8-ribityllumazine synthase LW858_19070 PF06968 Biotin and Thiamin Synthesis associated domain LW858_19070 PF04055 Radical SAM superfamily LW858_19075 PF13847 Methyltransferase domain LW858_19080 PF12697 Alpha/beta hydrolase family LW858_19080 PF08241 Methyltransferase domain LW858_19085 PF00155 Aminotransferase class I and II LW858_19095 PF00202 Aminotransferase class-III LW858_19105 PF03553 Na+/H+ antiporter family LW858_19110 PF02872 5'-nucleotidase, C-terminal domain LW858_19110 PF00149 Calcineurin-like phosphoesterase LW858_19120 PF01037 Lrp/AsnC ligand binding domain LW858_19120 PF13404 AsnC-type helix-turn-helix domain LW858_19135 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LW858_19135 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LW858_19140 PF00202 Aminotransferase class-III LW858_19145 PF00696 Amino acid kinase family LW858_19150 PF01960 ArgJ family LW858_19155 PF01118 Semialdehyde dehydrogenase, NAD binding domain LW858_19155 PF02774 Semialdehyde dehydrogenase, dimerisation domain LW858_19165 PF00106 short chain dehydrogenase LW858_19170 PF00753 Metallo-beta-lactamase superfamily LW858_19175 PF03807 NADP oxidoreductase coenzyme F420-dependent LW858_19175 PF14748 Pyrroline-5-carboxylate reductase dimerisation LW858_19180 PF03313 Serine dehydratase alpha chain LW858_19185 PF03315 Serine dehydratase beta chain LW858_19185 PF01842 ACT domain LW858_19190 PF12706 Beta-lactamase superfamily domain LW858_19190 PF00753 Metallo-beta-lactamase superfamily LW858_19200 PF11799 impB/mucB/samB family C-terminal domain LW858_19200 PF00817 impB/mucB/samB family LW858_19200 PF11798 IMS family HHH motif LW858_19205 PF01546 Peptidase family M20/M25/M40 LW858_19205 PF07687 Peptidase dimerisation domain LW858_19210 PF13302 Acetyltransferase (GNAT) domain LW858_19225 PF03734 L,D-transpeptidase catalytic domain LW858_19230 PF06081 Aromatic acid exporter family member 1 LW858_19230 PF11728 Putative aromatic acid exporter C-terminal domain LW858_19235 PF00005 ABC transporter LW858_19240 PF00528 Binding-protein-dependent transport system inner membrane component LW858_19245 PF00497 Bacterial extracellular solute-binding proteins, family 3 LW858_19250 PF06491 Disulphide isomerase LW858_19260 PF00293 NUDIX domain LW858_19260 PF09297 NADH pyrophosphatase zinc ribbon domain LW858_19265 PF04239 Protein of unknown function (DUF421) LW858_19270 PF01098 Cell cycle protein LW858_19280 PF02817 e3 binding domain LW858_19280 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LW858_19280 PF00364 Biotin-requiring enzyme LW858_19285 PF02779 Transketolase, pyrimidine binding domain LW858_19285 PF02780 Transketolase, C-terminal domain LW858_19290 PF00676 Dehydrogenase E1 component LW858_19295 PF07992 Pyridine nucleotide-disulphide oxidoreductase LW858_19295 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LW858_19300 PF00871 Acetokinase family LW858_19305 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LW858_19305 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LW858_19310 PF01515 Phosphate acetyl/butaryl transferase LW858_19315 PF02954 Bacterial regulatory protein, Fis family LW858_19315 PF00989 PAS fold LW858_19315 PF00158 Sigma-54 interaction domain LW858_19325 PF03009 Glycerophosphoryl diester phosphodiesterase family LW858_19330 PF14174 YycC-like protein LW858_19340 PF00072 Response regulator receiver domain LW858_19340 PF08769 Sporulation initiation factor Spo0A C terminal LW858_19345 PF05580 SpoIVB peptidase S55 LW858_19345 PF17820 PDZ domain LW858_19350 PF13476 AAA domain LW858_19355 PF01316 Arginine repressor, DNA binding domain LW858_19355 PF02863 Arginine repressor, C-terminal domain LW858_19360 PF01728 FtsJ-like methyltransferase LW858_19360 PF01479 S4 domain LW858_19365 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LW858_19365 PF02779 Transketolase, pyrimidine binding domain LW858_19365 PF02780 Transketolase, C-terminal domain LW858_19370 PF00348 Polyprenyl synthetase LW858_19375 PF02609 Exonuclease VII small subunit LW858_19380 PF13742 OB-fold nucleic acid binding domain LW858_19380 PF02601 Exonuclease VII, large subunit LW858_19385 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LW858_19385 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LW858_19390 PF01029 NusB family LW858_19395 PF03780 Asp23 family, cell envelope-related function LW858_19400 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LW858_19400 PF02785 Biotin carboxylase C-terminal domain LW858_19400 PF00289 Biotin carboxylase, N-terminal domain LW858_19405 PF00364 Biotin-requiring enzyme LW858_19415 PF12685 SpoIIIAH-like protein LW858_19425 PF09581 Stage III sporulation protein AF (Spore_III_AF) LW858_19430 PF09546 Stage III sporulation protein AE (spore_III_AE) LW858_19435 PF06686 Stage III sporulation protein AC/AD protein family LW858_19440 PF06686 Stage III sporulation protein AC/AD protein family LW858_19445 PF09548 Stage III sporulation protein AB (spore_III_AB) LW858_19480 PF09285 Elongation factor P, C-terminal LW858_19480 PF08207 Elongation factor P (EF-P) KOW-like domain LW858_19480 PF01132 Elongation factor P (EF-P) OB domain LW858_19490 PF01220 Dehydroquinase class II LW858_19495 PF11085 Conserved membrane protein YqhR LW858_19500 PF07136 Protein of unknown function (DUF1385) LW858_19510 PF13419 Haloacid dehalogenase-like hydrolase LW858_19515 PF01325 Iron dependent repressor, N-terminal DNA binding domain LW858_19515 PF02742 Iron dependent repressor, metal binding and dimerisation domain LW858_19540 PF03099 Biotin/lipoate A/B protein ligase family LW858_19545 PF00581 Rhodanese-like domain LW858_19555 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LW858_19555 PF00356 Bacterial regulatory proteins, lacI family LW858_19565 PF00893 Small Multidrug Resistance protein LW858_19570 PF00893 Small Multidrug Resistance protein LW858_19595 PF02347 Glycine cleavage system P-protein LW858_19600 PF02347 Glycine cleavage system P-protein LW858_19605 PF08669 Glycine cleavage T-protein C-terminal barrel domain LW858_19605 PF01571 Aminomethyltransferase folate-binding domain LW858_19610 PF00271 Helicase conserved C-terminal domain LW858_19610 PF00176 SNF2 family N-terminal domain LW858_19615 PF11079 Bacterial protein YqhG of unknown function LW858_19645 PF12833 Helix-turn-helix domain LW858_19645 PF02805 Metal binding domain of Ada LW858_19650 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain LW858_19650 PF00730 HhH-GPD superfamily base excision DNA repair protein LW858_19675 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA LW858_19680 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LW858_19680 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LW858_19685 PF12833 Helix-turn-helix domain LW858_19685 PF02805 Metal binding domain of Ada LW858_19690 PF02655 ATP-grasp domain LW858_19690 PF00206 Lyase LW858_19695 PF07859 alpha/beta hydrolase fold LW858_19715 PF14038 YqzE-like protein LW858_19720 PF01202 Shikimate kinase LW858_19755 PF00482 Type II secretion system (T2SS), protein F LW858_19760 PF00437 Type II/IV secretion system protein LW858_19770 PF11117 Protein of unknown function (DUF2626) LW858_19775 PF00375 Sodium:dicarboxylate symporter family LW858_19810 PF04101 Glycosyltransferase family 28 C-terminal domain LW858_19810 PF03033 Glycosyltransferase family 28 N-terminal domain LW858_19815 PF02574 Homocysteine S-methyltransferase LW858_19815 PF00809 Pterin binding enzyme LW858_19815 PF02607 B12 binding domain LW858_19815 PF02310 B12 binding domain LW858_19815 PF02965 Vitamin B12 dependent methionine synthase, activation domain LW858_19820 PF02219 Methylenetetrahydrofolate reductase LW858_19820 PF02574 Homocysteine S-methyltransferase LW858_19825 PF01053 Cys/Met metabolism PLP-dependent enzyme LW858_19830 PF01053 Cys/Met metabolism PLP-dependent enzyme LW858_19840 PF01022 Bacterial regulatory protein, arsR family LW858_19855 PF00753 Metallo-beta-lactamase superfamily LW858_19860 PF10958 Protein of unknown function (DUF2759) LW858_19865 PF00480 ROK family LW858_19870 PF06014 Bacterial protein of unknown function (DUF910) LW858_19875 PF01812 5-formyltetrahydrofolate cyclo-ligase family LW858_19880 PF00471 Ribosomal protein L33 LW858_19885 PF00483 Nucleotidyl transferase LW858_19890 PF01895 PhoU domain LW858_19895 PF00005 ABC transporter LW858_19900 PF00528 Binding-protein-dependent transport system inner membrane component LW858_19905 PF00528 Binding-protein-dependent transport system inner membrane component LW858_19910 PF12849 PBP superfamily domain LW858_19915 PF00905 Penicillin binding protein transpeptidase domain LW858_19915 PF03717 Penicillin-binding Protein dimerisation domain LW858_19920 PF07690 Major Facilitator Superfamily LW858_19925 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LW858_19925 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LW858_19935 PF06691 Protein of unknown function (DUF1189) LW858_19945 PF04551 GcpE protein LW858_19950 PF01475 Ferric uptake regulator family LW858_19955 PF00950 ABC 3 transport family LW858_19960 PF00005 ABC transporter LW858_19965 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LW858_19965 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LW858_19970 PF11116 Protein of unknown function (DUF2624) LW858_19975 PF01261 Xylose isomerase-like TIM barrel LW858_19980 PF00271 Helicase conserved C-terminal domain LW858_19980 PF00270 DEAD/DEAH box helicase LW858_19990 PF02401 LytB protein LW858_19995 PF01784 NIF3 (NGG1p interacting factor 3) LW858_20000 PF04816 tRNA (adenine(22)-N(1))-methyltransferase LW858_20005 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LW858_20010 PF04539 Sigma-70 region 3 LW858_20010 PF04542 Sigma-70 region 2 LW858_20010 PF00140 Sigma-70 factor, region 1.2 LW858_20010 PF03979 Sigma-70 factor, region 1.1 LW858_20010 PF04545 Sigma-70, region 4 LW858_20015 PF08275 DNA primase catalytic core, N-terminal domain LW858_20015 PF01807 CHC2 zinc finger LW858_20015 PF10410 DnaB-helicase binding domain of primase LW858_20025 PF03618 Kinase/pyrophosphorylase LW858_20030 PF08279 HTH domain LW858_20030 PF00571 CBS domain LW858_20035 PF11967 Recombination protein O N terminal LW858_20035 PF02565 Recombination protein O C terminal LW858_20045 PF01926 50S ribosome-binding GTPase LW858_20045 PF07650 KH domain LW858_20050 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LW858_20055 PF01219 Prokaryotic diacylglycerol kinase LW858_20060 PF02130 Uncharacterized protein family UPF0054 LW858_20065 PF07697 7TM-HD extracellular LW858_20065 PF01966 HD domain LW858_20065 PF07698 7TM receptor with intracellular HD hydrolase LW858_20070 PF02562 PhoH-like protein LW858_20075 PF06898 Putative stage IV sporulation protein YqfD LW858_20080 PF07873 YabP family LW858_20085 PF09424 Yqey-like protein LW858_20090 PF01165 Ribosomal protein S21 LW858_20095 PF04055 Radical SAM superfamily LW858_20095 PF00919 Uncharacterized protein family UPF0004 LW858_20095 PF01938 TRAM domain LW858_20100 PF04452 RNA methyltransferase LW858_20110 PF00684 DnaJ central domain LW858_20110 PF00226 DnaJ domain LW858_20110 PF01556 DnaJ C terminal domain LW858_20115 PF00012 Hsp70 protein LW858_20120 PF01025 GrpE LW858_20125 PF02371 Transposase IS116/IS110/IS902 family LW858_20125 PF01548 Transposase LW858_20130 PF01628 HrcA protein C terminal domain LW858_20135 PF04055 Radical SAM superfamily LW858_20135 PF06969 HemN C-terminal domain LW858_20140 PF01638 HxlR-like helix-turn-helix LW858_20145 PF03144 Elongation factor Tu domain 2 LW858_20145 PF06421 GTP-binding protein LepA C-terminus LW858_20145 PF00679 Elongation factor G C-terminus LW858_20145 PF00009 Elongation factor Tu GTP binding domain LW858_20155 PF03418 Germination protease LW858_20160 PF01649 Ribosomal protein S20 LW858_20165 PF06144 DNA polymerase III, delta subunit LW858_20170 PF14141 YqzM-like protein LW858_20175 PF13567 Domain of unknown function (DUF4131) LW858_20175 PF03772 Competence protein LW858_20175 PF00753 Metallo-beta-lactamase superfamily LW858_20180 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LW858_20185 PF10531 SLBB domain LW858_20190 PF14748 Pyrroline-5-carboxylate reductase dimerisation LW858_20190 PF03807 NADP oxidoreductase coenzyme F420-dependent LW858_20195 PF13649 Methyltransferase domain LW858_20205 PF01966 HD domain LW858_20210 PF01467 Cytidylyltransferase-like LW858_20215 PF01985 CRS1 / YhbY (CRM) domain LW858_20220 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LW858_20220 PF01488 Shikimate / quinate 5-dehydrogenase LW858_20220 PF08501 Shikimate dehydrogenase substrate binding domain LW858_20225 PF01926 50S ribosome-binding GTPase LW858_20240 PF02666 Phosphatidylserine decarboxylase LW858_20245 PF04542 Sigma-70 region 2 LW858_20245 PF04545 Sigma-70, region 4 LW858_20265 PF00471 Ribosomal protein L33 LW858_20270 PF00881 Nitroreductase family LW858_20275 PF04607 Region found in RelA / SpoT proteins LW858_20290 PF00583 Acetyltransferase (GNAT) family LW858_20295 PF00561 alpha/beta hydrolase fold LW858_20295 PF08386 TAP-like protein LW858_20345 PF00351 Biopterin-dependent aromatic amino acid hydroxylase LW858_20360 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LW858_20365 PF07681 DoxX LW858_20400 PF00005 ABC transporter LW858_20405 PF01032 FecCD transport family LW858_20410 PF01497 Periplasmic binding protein LW858_20415 PF14143 YrhC-like protein LW858_20420 PF00171 Aldehyde dehydrogenase family LW858_20420 PF00465 Iron-containing alcohol dehydrogenase LW858_20425 PF01053 Cys/Met metabolism PLP-dependent enzyme LW858_20430 PF00291 Pyridoxal-phosphate dependent enzyme LW858_20435 PF01048 Phosphorylase superfamily LW858_20440 PF08241 Methyltransferase domain LW858_20460 PF03717 Penicillin-binding Protein dimerisation domain LW858_20460 PF00905 Penicillin binding protein transpeptidase domain LW858_20475 PF01272 Transcription elongation factor, GreA/GreB, C-term LW858_20475 PF03449 Transcription elongation factor, N-terminal LW858_20480 PF00485 Phosphoribulokinase / Uridine kinase family LW858_20485 PF01136 Peptidase family U32 LW858_20485 PF16325 Peptidase family U32 C-terminal domain LW858_20490 PF01136 Peptidase family U32 LW858_20495 PF01596 O-methyltransferase LW858_20500 PF02618 YceG-like family LW858_20505 PF06949 Protein of unknown function (DUF1292) LW858_20510 PF03652 Holliday junction resolvase LW858_20515 PF06135 IreB regulatory phosphoprotein LW858_20520 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LW858_20520 PF02272 DHHA1 domain LW858_20520 PF01411 tRNA synthetases class II (A) LW858_20530 PF01594 AI-2E family transporter LW858_20550 PF14490 Helix-hairpin-helix containing domain LW858_20550 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain LW858_20550 PF13538 UvrD-like helicase C-terminal domain LW858_20565 PF00266 Aminotransferase class-V LW858_20570 PF02082 Transcriptional regulator LW858_20575 PF16193 AAA C-terminal domain LW858_20575 PF12002 MgsA AAA+ ATPase C terminal LW858_20575 PF05496 Holliday junction DNA helicase RuvB P-loop domain LW858_20590 PF00899 ThiF family LW858_20595 PF02938 GAD domain LW858_20595 PF00152 tRNA synthetases class II (D, K and N) LW858_20595 PF01336 OB-fold nucleic acid binding domain LW858_20600 PF03129 Anticodon binding domain LW858_20600 PF13393 Histidyl-tRNA synthetase LW858_20615 PF02580 D-Tyr-tRNA(Tyr) deacylase LW858_20620 PF13291 ACT domain LW858_20620 PF04607 Region found in RelA / SpoT proteins LW858_20620 PF02824 TGS domain LW858_20625 PF00156 Phosphoribosyl transferase domain LW858_20630 PF02272 DHHA1 domain LW858_20630 PF10141 Single-strand DNA-specific exonuclease, C terminal domain LW858_20630 PF17768 RecJ OB domain LW858_20630 PF01368 DHH family LW858_20635 PF16916 Dimerisation domain of Zinc Transporter LW858_20635 PF01545 Cation efflux family LW858_20640 PF02355 Protein export membrane protein LW858_20640 PF07549 SecD/SecF GG Motif LW858_20645 PF13797 Post-transcriptional regulator LW858_20650 PF01943 Polysaccharide biosynthesis protein LW858_20650 PF14667 Polysaccharide biosynthesis C-terminal domain LW858_20655 PF04239 Protein of unknown function (DUF421) LW858_20665 PF02699 Preprotein translocase subunit LW858_20670 PF01702 Queuine tRNA-ribosyltransferase LW858_20675 PF02547 Queuosine biosynthesis protein LW858_20680 PF11146 Protein of unknown function (DUF2905) LW858_20685 PF05496 Holliday junction DNA helicase RuvB P-loop domain LW858_20685 PF05491 RuvB C-terminal winged helix domain LW858_20685 PF17864 RuvB AAA lid domain LW858_20690 PF01330 RuvA N terminal domain LW858_20690 PF07499 RuvA, C-terminal domain LW858_20695 PF01497 Periplasmic binding protein LW858_20720 PF01476 LysM domain LW858_20725 PF02445 Quinolinate synthetase A protein LW858_20730 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LW858_20730 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LW858_20735 PF00890 FAD binding domain LW858_20735 PF02910 Fumarate reductase flavoprotein C-term LW858_20740 PF00266 Aminotransferase class-V LW858_20745 PF02829 3H domain LW858_20745 PF08279 HTH domain LW858_20750 PF03475 3-alpha domain LW858_20750 PF03473 MOSC domain LW858_20755 PF00800 Prephenate dehydratase LW858_20755 PF01842 ACT domain LW858_20760 PF02687 FtsX-like permease family LW858_20765 PF02687 FtsX-like permease family LW858_20770 PF00005 ABC transporter LW858_20775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_20780 PF00486 Transcriptional regulatory protein, C terminal LW858_20780 PF00072 Response regulator receiver domain LW858_20785 PF01926 50S ribosome-binding GTPase LW858_20785 PF01018 GTP1/OBG LW858_20785 PF09269 Domain of unknown function (DUF1967) LW858_20790 PF14682 Sporulation initiation phospho-transferase B, C-terminal LW858_20790 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LW858_20795 PF01016 Ribosomal L27 protein LW858_20800 PF04327 Cysteine protease Prp LW858_20805 PF00829 Ribosomal prokaryotic L21 protein LW858_20810 PF00575 S1 RNA binding domain LW858_20810 PF10150 Ribonuclease E/G family LW858_20815 PF02163 Peptidase family M50 LW858_20820 PF01551 Peptidase family M23 LW858_20825 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LW858_20830 PF03775 Septum formation inhibitor MinC, C-terminal domain LW858_20840 PF04085 rod shape-determining protein MreC LW858_20870 PF14436 Bacterial EndoU nuclease LW858_20870 PF04740 LXG domain of WXG superfamily LW858_20880 PF17874 MalT-like TPR region LW858_20880 PF18801 response regulator aspartate phosphatase H, N terminal LW858_20950 PF10549 ORF11CD3 domain LW858_20950 PF09669 Phage regulatory protein Rha (Phage_pRha) LW858_20970 PF07508 Recombinase LW858_20970 PF00239 Resolvase, N terminal domain LW858_20970 PF13408 Recombinase zinc beta ribbon domain LW858_20980 PF02545 Maf-like protein LW858_20990 PF02875 Mur ligase family, glutamate ligase domain LW858_20990 PF08245 Mur ligase middle domain LW858_20995 PF08264 Anticodon-binding domain of tRNA LW858_20995 PF00133 tRNA synthetases class I (I, L, M and V) LW858_20995 PF10458 Valyl tRNA synthetase tRNA binding arm LW858_21005 PF01476 LysM domain LW858_21010 PF00202 Aminotransferase class-III LW858_21015 PF00490 Delta-aminolevulinic acid dehydratase LW858_21020 PF02602 Uroporphyrinogen-III synthase HemD LW858_21025 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LW858_21025 PF03900 Porphobilinogen deaminase, C-terminal domain LW858_21030 PF01578 Cytochrome C assembly protein LW858_21035 PF01488 Shikimate / quinate 5-dehydrogenase LW858_21035 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LW858_21035 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LW858_21040 PF01047 MarR family LW858_21045 PF02566 OsmC-like protein LW858_21050 PF01926 50S ribosome-binding GTPase LW858_21055 PF00004 ATPase family associated with various cellular activities (AAA) LW858_21055 PF05362 Lon protease (S16) C-terminal proteolytic domain LW858_21055 PF02190 ATP-dependent protease La (LON) substrate-binding domain LW858_21060 PF00004 ATPase family associated with various cellular activities (AAA) LW858_21060 PF05362 Lon protease (S16) C-terminal proteolytic domain LW858_21065 PF10431 C-terminal, D2-small domain, of ClpB protein LW858_21065 PF07724 AAA domain (Cdc48 subfamily) LW858_21065 PF06689 ClpX C4-type zinc finger LW858_21070 PF05698 Bacterial trigger factor protein (TF) C-terminus LW858_21070 PF05697 Bacterial trigger factor protein (TF) LW858_21070 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LW858_21085 PF08000 Bacterial PH domain LW858_21085 PF11724 YvbH-like oligomerisation region LW858_21105 PF12850 Calcineurin-like phosphoesterase superfamily domain LW858_21110 PF01725 Ham1 family LW858_21115 PF03725 3' exoribonuclease family, domain 2 LW858_21115 PF01138 3' exoribonuclease family, domain 1 LW858_21120 PF10646 Sporulation and spore germination LW858_21125 PF01177 Asp/Glu/Hydantoin racemase LW858_21130 PF07690 Major Facilitator Superfamily LW858_21140 PF00440 Bacterial regulatory proteins, tetR family LW858_21150 PF00196 Bacterial regulatory proteins, luxR family LW858_21170 PF07969 Amidohydrolase family LW858_21175 PF04024 PspC domain LW858_21180 PF07883 Cupin domain LW858_21180 PF01381 Helix-turn-helix LW858_21185 PF13536 Putative multidrug resistance efflux transporter LW858_21190 PF00230 Major intrinsic protein LW858_21195 PF02082 Transcriptional regulator LW858_21205 PF13732 Domain of unknown function (DUF4162) LW858_21205 PF00005 ABC transporter LW858_21210 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) LW858_21220 PF13677 Membrane MotB of proton-channel complex MotA/MotB LW858_21220 PF00691 OmpA family LW858_21225 PF01618 MotA/TolQ/ExbB proton channel family LW858_21230 PF02557 D-alanyl-D-alanine carboxypeptidase LW858_21235 PF03061 Thioesterase superfamily LW858_21240 PF13085 2Fe-2S iron-sulfur cluster binding domain LW858_21240 PF13183 4Fe-4S dicluster domain LW858_21245 PF00890 FAD binding domain LW858_21245 PF02910 Fumarate reductase flavoprotein C-term LW858_21250 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LW858_21255 PF10702 Protein of unknown function (DUF2507) LW858_21260 PF02151 UvrB/uvrC motif LW858_21260 PF08459 UvrC Helix-hairpin-helix N-terminal LW858_21260 PF01541 GIY-YIG catalytic domain LW858_21270 PF00085 Thioredoxin LW858_21275 PF01012 Electron transfer flavoprotein domain LW858_21275 PF00766 Electron transfer flavoprotein FAD-binding domain LW858_21280 PF01012 Electron transfer flavoprotein domain LW858_21285 PF00378 Enoyl-CoA hydratase/isomerase LW858_21290 PF08359 YsiA-like protein, C-terminal region LW858_21290 PF00440 Bacterial regulatory proteins, tetR family LW858_21295 PF13193 AMP-binding enzyme C-terminal domain LW858_21295 PF00501 AMP-binding enzyme LW858_21305 PF01497 Periplasmic binding protein LW858_21310 PF01032 FecCD transport family LW858_21320 PF05163 DinB family LW858_21350 PF00512 His Kinase A (phospho-acceptor) domain LW858_21350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_21355 PF00072 Response regulator receiver domain LW858_21355 PF00486 Transcriptional regulatory protein, C terminal LW858_21365 PF09962 Uncharacterized conserved protein (DUF2196) LW858_21370 PF10672 S-adenosylmethionine-dependent methyltransferase LW858_21370 PF17785 PUA-like domain LW858_21375 PF03992 Antibiotic biosynthesis monooxygenase LW858_21380 PF04203 Sortase domain LW858_21385 PF00005 ABC transporter LW858_21390 PF01032 FecCD transport family LW858_21395 PF01497 Periplasmic binding protein LW858_21400 PF05031 Iron Transport-associated domain LW858_21410 PF05031 Iron Transport-associated domain LW858_21415 PF05525 Branched-chain amino acid transport protein LW858_21420 PF01479 S4 domain LW858_21420 PF00849 RNA pseudouridylate synthase LW858_21425 PF01713 Smr domain LW858_21425 PF00488 MutS domain V LW858_21430 PF02811 PHP domain LW858_21430 PF14716 Helix-hairpin-helix domain LW858_21430 PF14791 DNA polymerase beta thumb LW858_21435 PF02674 Colicin V production protein LW858_21440 PF05164 Cell division protein ZapA LW858_21445 PF01351 Ribonuclease HII LW858_21445 PF11858 Domain of unknown function (DUF3378) LW858_21465 PF00152 tRNA synthetases class II (D, K and N) LW858_21465 PF01336 OB-fold nucleic acid binding domain LW858_21470 PF01588 Putative tRNA binding domain LW858_21470 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LW858_21470 PF03484 tRNA synthetase B5 domain LW858_21470 PF03147 Ferredoxin-fold anticodon binding domain LW858_21470 PF03483 B3/4 domain LW858_21475 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LW858_21475 PF01409 tRNA synthetases class II core domain (F) LW858_21480 PF00588 SpoU rRNA Methylase family LW858_21480 PF08032 RNA 2'-O ribose methyltransferase substrate binding LW858_21485 PF14098 Small, acid-soluble spore protein I LW858_21490 PF01966 HD domain LW858_21510 PF07690 Major Facilitator Superfamily LW858_21520 PF16859 Tetracyclin repressor-like, C-terminal domain LW858_21520 PF00440 Bacterial regulatory proteins, tetR family LW858_21525 PF05343 M42 glutamyl aminopeptidase LW858_21535 PF00453 Ribosomal protein L20 LW858_21540 PF01632 Ribosomal protein L35 LW858_21545 PF05198 Translation initiation factor IF-3, N-terminal domain LW858_21545 PF00707 Translation initiation factor IF-3, C-terminal domain LW858_21550 PF03129 Anticodon binding domain LW858_21550 PF02824 TGS domain LW858_21550 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LW858_21550 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LW858_21555 PF08812 YtxC-like family LW858_21560 PF13783 Domain of unknown function (DUF4177) LW858_21565 PF01695 IstB-like ATP binding protein LW858_21565 PF07319 Primosomal protein DnaI N-terminus LW858_21570 PF07261 Replication initiation and membrane attachment LW858_21575 PF03477 ATP cone domain LW858_21580 PF02675 S-adenosylmethionine decarboxylase LW858_21585 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LW858_21585 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LW858_21590 PF01121 Dephospho-CoA kinase LW858_21595 PF02659 Putative manganese efflux pump LW858_21600 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LW858_21600 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LW858_21600 PF06827 Zinc finger found in FPG and IleRS LW858_21605 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LW858_21605 PF01367 5'-3' exonuclease, C-terminal SAM fold LW858_21605 PF00476 DNA polymerase family A LW858_21610 PF00989 PAS fold LW858_21610 PF00512 His Kinase A (phospho-acceptor) domain LW858_21610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_21610 PF16736 Single Cache-like LW858_21615 PF00072 Response regulator receiver domain LW858_21615 PF00486 Transcriptional regulatory protein, C terminal LW858_21630 PF00056 lactate/malate dehydrogenase, NAD binding domain LW858_21630 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LW858_21635 PF00180 Isocitrate/isopropylmalate dehydrogenase LW858_21640 PF00285 Citrate synthase, C-terminal domain LW858_21645 PF04284 Protein of unknown function (DUF441) LW858_21650 PF01594 AI-2E family transporter LW858_21655 PF04186 FxsA cytoplasmic membrane protein LW858_21660 PF00391 PEP-utilising enzyme, mobile domain LW858_21660 PF00224 Pyruvate kinase, barrel domain LW858_21660 PF02887 Pyruvate kinase, alpha/beta domain LW858_21665 PF00365 Phosphofructokinase LW858_21670 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LW858_21675 PF01039 Carboxyl transferase domain LW858_21675 PF17848 Acetyl-coA carboxylase zinc finger domain LW858_21680 PF00392 Bacterial regulatory proteins, gntR family LW858_21685 PF03949 Malic enzyme, NAD binding domain LW858_21685 PF00390 Malic enzyme, N-terminal domain LW858_21690 PF07733 Bacterial DNA polymerase III alpha NTPase domain LW858_21690 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LW858_21690 PF14579 Helix-hairpin-helix motif LW858_21690 PF02811 PHP domain LW858_21690 PF01336 OB-fold nucleic acid binding domain LW858_21695 PF14034 Sporulation protein YtrH LW858_21705 PF01368 DHH family LW858_21705 PF02272 DHHA1 domain LW858_21710 PF14007 YtpI-like protein LW858_21720 PF03061 Thioesterase superfamily LW858_21720 PF00571 CBS domain LW858_21720 PF07085 DRTGG domain LW858_21720 PF00392 Bacterial regulatory proteins, gntR family LW858_21735 PF01321 Creatinase/Prolidase N-terminal domain LW858_21735 PF00557 Metallopeptidase family M24 LW858_21770 PF12746 GNAT acetyltransferase LW858_21775 PF07883 Cupin domain LW858_21785 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LW858_21785 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LW858_21795 PF00582 Universal stress protein family LW858_21815 PF14698 Argininosuccinate lyase C-terminal LW858_21815 PF00206 Lyase LW858_21820 PF00764 Arginosuccinate synthase LW858_21835 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LW858_21835 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LW858_21840 PF12787 EcsC protein family LW858_21845 PF13610 DDE domain LW858_21855 PF00871 Acetokinase family LW858_21860 PF02384 N-6 DNA Methylase LW858_21865 PF08534 Redoxin LW858_21870 PF09579 Sporulation protein YtfJ (Spore_YtfJ) LW858_21880 PF01513 ATP-NAD kinase LW858_21885 PF07969 Amidohydrolase family LW858_21895 PF13193 AMP-binding enzyme C-terminal domain LW858_21895 PF00501 AMP-binding enzyme LW858_21900 PF00269 Small, acid-soluble spore proteins, alpha/beta type LW858_21905 PF02926 THUMP domain LW858_21905 PF02568 Thiamine biosynthesis protein (ThiI) LW858_21910 PF00266 Aminotransferase class-V LW858_21920 PF06160 Septation ring formation regulator, EzrA LW858_21925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LW858_21925 PF03466 LysR substrate binding domain LW858_21930 PF00892 EamA-like transporter family LW858_21935 PF00440 Bacterial regulatory proteins, tetR family LW858_21940 PF13185 GAF domain LW858_21945 PF01053 Cys/Met metabolism PLP-dependent enzyme LW858_21950 PF00163 Ribosomal protein S4/S9 N-terminal domain LW858_21950 PF01479 S4 domain LW858_21955 PF04740 LXG domain of WXG superfamily LW858_21955 PF14436 Bacterial EndoU nuclease LW858_21975 PF01479 S4 domain LW858_21975 PF00579 tRNA synthetases class I (W and Y) LW858_21980 PF14602 Hexapeptide repeat of succinyl-transferase LW858_21980 PF12464 Maltose acetyltransferase LW858_21985 PF00501 AMP-binding enzyme LW858_21985 PF13193 AMP-binding enzyme C-terminal domain LW858_21990 PF00583 Acetyltransferase (GNAT) family LW858_21995 PF00571 CBS domain LW858_22000 PF00850 Histone deacetylase domain LW858_22020 PF00072 Response regulator receiver domain LW858_22020 PF00486 Transcriptional regulatory protein, C terminal LW858_22025 PF00672 HAMP domain LW858_22025 PF00512 His Kinase A (phospho-acceptor) domain LW858_22025 PF13426 PAS domain LW858_22025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_22030 PF12796 Ankyrin repeats (3 copies) LW858_22035 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LW858_22040 PF01741 Large-conductance mechanosensitive channel, MscL LW858_22065 PF00356 Bacterial regulatory proteins, lacI family LW858_22075 PF13610 DDE domain LW858_22085 PF07537 CamS sex pheromone cAM373 precursor LW858_22090 PF11009 Protein of unknown function (DUF2847) LW858_22100 PF02073 Thermophilic metalloprotease (M29) LW858_22125 PF13302 Acetyltransferase (GNAT) domain LW858_22135 PF08245 Mur ligase middle domain LW858_22135 PF02875 Mur ligase family, glutamate ligase domain LW858_22135 PF01225 Mur ligase family, catalytic domain LW858_22145 PF09397 Ftsk gamma domain LW858_22145 PF17854 FtsK alpha domain LW858_22145 PF01580 FtsK/SpoIIIE family LW858_22155 PF01520 N-acetylmuramoyl-L-alanine amidase LW858_22155 PF08239 Bacterial SH3 domain LW858_22165 PF01588 Putative tRNA binding domain LW858_22165 PF14794 Domain of unknown function (DUF4479) LW858_22170 PF07285 Protein of unknown function (DUF1444) LW858_22175 PF00085 Thioredoxin LW858_22180 PF01931 Protein of unknown function DUF84 LW858_22185 PF05343 M42 glutamyl aminopeptidase LW858_22200 PF00753 Metallo-beta-lactamase superfamily LW858_22205 PF02390 Putative methyltransferase LW858_22210 PF14165 YtzH-like protein LW858_22215 PF01636 Phosphotransferase enzyme family LW858_22220 PF00128 Alpha amylase, catalytic domain LW858_22220 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LW858_22220 PF17999 Pullulanase N1-terminal domain LW858_22225 PF02834 LigT like Phosphoesterase LW858_22230 PF01546 Peptidase family M20/M25/M40 LW858_22240 PF08220 DeoR-like helix-turn-helix domain LW858_22245 PF00849 RNA pseudouridylate synthase LW858_22245 PF01479 S4 domain LW858_22250 PF14667 Polysaccharide biosynthesis C-terminal domain LW858_22250 PF01943 Polysaccharide biosynthesis protein LW858_22260 PF07690 Major Facilitator Superfamily LW858_22265 PF01022 Bacterial regulatory protein, arsR family LW858_22270 PF08327 Activator of Hsp90 ATPase homolog 1-like protein LW858_22280 PF10957 Sporulation protein Cse60 LW858_22290 PF02559 CarD-like/TRCF domain LW858_22300 PF06800 Sugar transport protein LW858_22315 PF02391 MoaE protein LW858_22320 PF03205 Molybdopterin guanine dinucleotide synthesis protein B LW858_22325 PF03454 MoeA C-terminal region (domain IV) LW858_22325 PF00994 Probable molybdopterin binding domain LW858_22325 PF03453 MoeA N-terminal region (domain I and II) LW858_22330 PF01967 MoaC family LW858_22335 PF00899 ThiF family LW858_22340 PF06463 Molybdenum Cofactor Synthesis C LW858_22340 PF04055 Radical SAM superfamily LW858_22360 PF00581 Rhodanese-like domain LW858_22370 PF00561 alpha/beta hydrolase fold LW858_22375 PF03323 Bacillus/Clostridium GerA spore germination protein LW858_22380 PF03845 Spore germination protein LW858_22405 PF08264 Anticodon-binding domain of tRNA LW858_22405 PF00133 tRNA synthetases class I (I, L, M and V) LW858_22405 PF13603 Leucyl-tRNA synthetase, Domain 2 LW858_22405 PF09334 tRNA synthetases class I (M) LW858_22410 PF07690 Major Facilitator Superfamily LW858_22415 PF00999 Sodium/hydrogen exchanger family LW858_22420 PF02080 TrkA-C domain LW858_22425 PF00589 Phage integrase family LW858_22445 PF00005 ABC transporter LW858_22450 PF04235 Protein of unknown function (DUF418) LW858_22450 PF07786 Protein of unknown function (DUF1624) LW858_22460 PF10732 Protein of unknown function (DUF2524) LW858_22465 PF04055 Radical SAM superfamily LW858_22465 PF16199 Radical_SAM C-terminal domain LW858_22470 PF06962 Putative rRNA methylase LW858_22475 PF00005 ABC transporter LW858_22485 PF01177 Asp/Glu/Hydantoin racemase LW858_22500 PF10776 Protein of unknown function (DUF2600) LW858_22505 PF12146 Serine aminopeptidase, S33 LW858_22510 PF00132 Bacterial transferase hexapeptide (six repeats) LW858_22515 PF01569 PAP2 superfamily LW858_22520 PF00534 Glycosyl transferases group 1 LW858_22520 PF13439 Glycosyltransferase Family 4 LW858_22525 PF12804 MobA-like NTP transferase domain LW858_22530 PF00994 Probable molybdopterin binding domain LW858_22540 PF13302 Acetyltransferase (GNAT) domain LW858_22545 PF00438 S-adenosylmethionine synthetase, N-terminal domain LW858_22545 PF02772 S-adenosylmethionine synthetase, central domain LW858_22545 PF02773 S-adenosylmethionine synthetase, C-terminal domain LW858_22550 PF01293 Phosphoenolpyruvate carboxykinase LW858_22615 PF13610 DDE domain LW858_22625 PF13426 PAS domain LW858_22625 PF00989 PAS fold LW858_22625 PF00512 His Kinase A (phospho-acceptor) domain LW858_22625 PF13188 PAS domain LW858_22625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_22630 PF00512 His Kinase A (phospho-acceptor) domain LW858_22630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_22630 PF02743 Cache domain LW858_22635 PF18011 C-terminal domain found in long catalases LW858_22635 PF06628 Catalase-related immune-responsive LW858_22635 PF00199 Catalase LW858_22645 PF00561 alpha/beta hydrolase fold LW858_22645 PF08386 TAP-like protein LW858_22650 PF00884 Sulfatase LW858_22670 PF00005 ABC transporter LW858_22675 PF00528 Binding-protein-dependent transport system inner membrane component LW858_22690 PF13419 Haloacid dehalogenase-like hydrolase LW858_22700 PF00293 NUDIX domain LW858_22730 PF02664 S-Ribosylhomocysteinase (LuxS) LW858_22735 PF01809 Putative membrane protein insertion efficiency factor LW858_22740 PF00484 Carbonic anhydrase LW858_22745 PF01654 Cytochrome bd terminal oxidase subunit I LW858_22750 PF02322 Cytochrome bd terminal oxidase subunit II LW858_22760 PF10676 Spore germination protein gerPA/gerPF LW858_22770 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LW858_22770 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LW858_22790 PF04012 PspA/IM30 family LW858_22805 PF07670 Nucleoside recognition LW858_22805 PF02421 Ferrous iron transport protein B LW858_22805 PF17910 FeoB cytosolic helical domain LW858_22805 PF07664 Ferrous iron transport protein B C terminus LW858_22815 PF09515 Thiamine transporter protein (Thia_YuaJ) LW858_22820 PF00672 HAMP domain LW858_22820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_22820 PF00512 His Kinase A (phospho-acceptor) domain LW858_22825 PF00486 Transcriptional regulatory protein, C terminal LW858_22825 PF00072 Response regulator receiver domain LW858_22850 PF00156 Phosphoribosyl transferase domain LW858_22855 PF00781 Diacylglycerol kinase catalytic domain LW858_22880 PF02687 FtsX-like permease family LW858_22885 PF00005 ABC transporter LW858_22900 PF09335 SNARE associated Golgi protein LW858_22905 PF00398 Ribosomal RNA adenine dimethylase LW858_22910 PF02687 FtsX-like permease family LW858_22915 PF00005 ABC transporter LW858_22920 PF06445 GyrI-like small molecule binding domain LW858_22920 PF12833 Helix-turn-helix domain LW858_22930 PF07853 Protein of unknown function (DUF1648) LW858_22930 PF13630 SdpI/YhfL protein family LW858_22935 PF01022 Bacterial regulatory protein, arsR family LW858_22940 PF00072 Response regulator receiver domain LW858_22940 PF00486 Transcriptional regulatory protein, C terminal LW858_22945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_22950 PF02687 FtsX-like permease family LW858_22955 PF02687 FtsX-like permease family LW858_22960 PF00005 ABC transporter LW858_22965 PF02687 FtsX-like permease family LW858_22975 PF13977 BetI-type transcriptional repressor, C-terminal LW858_22975 PF00440 Bacterial regulatory proteins, tetR family LW858_22985 PF02447 GntP family permease LW858_22990 PF07702 UTRA domain LW858_22990 PF00392 Bacterial regulatory proteins, gntR family LW858_23000 PF07071 KDGP aldolase LW858_23005 PF03841 L-seryl-tRNA selenium transferase LW858_23010 PF01979 Amidohydrolase family LW858_23015 PF02557 D-alanyl-D-alanine carboxypeptidase LW858_23020 PF00512 His Kinase A (phospho-acceptor) domain LW858_23020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_23025 PF00486 Transcriptional regulatory protein, C terminal LW858_23025 PF00072 Response regulator receiver domain LW858_23030 PF13378 Enolase C-terminal domain-like LW858_23030 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LW858_23035 PF13193 AMP-binding enzyme C-terminal domain LW858_23035 PF00501 AMP-binding enzyme LW858_23040 PF00378 Enoyl-CoA hydratase/isomerase LW858_23045 PF00561 alpha/beta hydrolase fold LW858_23050 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LW858_23050 PF16582 Middle domain of thiamine pyrophosphate LW858_23050 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LW858_23055 PF00425 chorismate binding enzyme LW858_23060 PF01040 UbiA prenyltransferase family LW858_23065 PF01258 Prokaryotic dksA/traR C4-type zinc finger LW858_23070 PF00313 'Cold-shock' DNA-binding domain LW858_23095 PF00343 Carbohydrate phosphorylase LW858_23100 PF00534 Glycosyl transferases group 1 LW858_23100 PF08323 Starch synthase catalytic domain LW858_23105 PF00483 Nucleotidyl transferase LW858_23110 PF00483 Nucleotidyl transferase LW858_23115 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LW858_23115 PF00128 Alpha amylase, catalytic domain LW858_23115 PF02806 Alpha amylase, C-terminal all-beta domain LW858_23125 PF13860 FlgD Ig-like domain LW858_23125 PF05922 Peptidase inhibitor I9 LW858_23125 PF02225 PA domain LW858_23125 PF00082 Subtilase family LW858_23135 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LW858_23135 PF00056 lactate/malate dehydrogenase, NAD binding domain LW858_23265 PF02308 MgtC family LW858_23270 PF07885 Ion channel LW858_23270 PF02254 TrkA-N domain LW858_23275 PF08868 YugN-like family LW858_23280 PF00342 Phosphoglucose isomerase LW858_23285 PF04070 Domain of unknown function (DUF378) LW858_23290 PF00575 S1 RNA binding domain LW858_23295 PF00155 Aminotransferase class I and II LW858_23300 PF01037 Lrp/AsnC ligand binding domain LW858_23305 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LW858_23305 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LW858_23310 PF00561 alpha/beta hydrolase fold LW858_23310 PF08386 TAP-like protein LW858_23320 PF00155 Aminotransferase class I and II LW858_23335 PF08810 Kinase associated protein B LW858_23340 PF00929 Exonuclease LW858_23345 PF03600 Citrate transporter LW858_23360 PF03129 Anticodon binding domain LW858_23360 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LW858_23365 PF03061 Thioesterase superfamily LW858_23375 PF02632 BioY family LW858_23380 PF00483 Nucleotidyl transferase LW858_23385 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LW858_23385 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LW858_23385 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LW858_23385 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LW858_23390 PF10372 Bacterial membrane-spanning protein N-terminus LW858_23390 PF02457 DisA bacterial checkpoint controller nucleotide-binding LW858_23405 PF00892 EamA-like transporter family LW858_23410 PF01040 UbiA prenyltransferase family LW858_23425 PF00883 Cytosol aminopeptidase family, catalytic domain LW858_23425 PF02789 Cytosol aminopeptidase family, N-terminal domain LW858_23430 PF06725 3D domain LW858_23440 PF13344 Haloacid dehalogenase-like hydrolase LW858_23440 PF00293 NUDIX domain LW858_23445 PF07992 Pyridine nucleotide-disulphide oxidoreductase LW858_23450 PF07992 Pyridine nucleotide-disulphide oxidoreductase LW858_23460 PF06445 GyrI-like small molecule binding domain LW858_23475 PF04463 Protein of unknown function (DUF523) LW858_23505 PF01521 Iron-sulphur cluster biosynthesis LW858_23510 PF01678 Diaminopimelate epimerase LW858_23515 PF07293 Protein of unknown function (DUF1450) LW858_23520 PF07992 Pyridine nucleotide-disulphide oxidoreductase LW858_23530 PF00005 ABC transporter LW858_23530 PF09383 NIL domain LW858_23535 PF03649 Uncharacterised protein family (UPF0014) LW858_23540 PF03831 PhnA domain LW858_23540 PF08274 PhnA Zinc-Ribbon LW858_23580 PF01909 Nucleotidyltransferase domain LW858_23580 PF13427 Domain of unknown function (DUF4111) LW858_23585 PF07315 Protein of unknown function (DUF1462) LW858_23590 PF01106 NifU-like domain LW858_23605 PF04608 Phosphatidylglycerophosphatase A LW858_23615 PF02525 Flavodoxin-like fold LW858_23625 PF13344 Haloacid dehalogenase-like hydrolase LW858_23635 PF01934 Protein of unknown function DUF86 LW858_23640 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded LW858_23680 PF06265 Protein of unknown function (DUF1027) LW858_23685 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) LW858_23690 PF07739 TipAS antibiotic-recognition domain LW858_23690 PF13411 MerR HTH family regulatory protein LW858_23695 PF10086 YhfC intramembrane metalloprotease LW858_23715 PF04055 Radical SAM superfamily LW858_23715 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LW858_23720 PF01551 Peptidase family M23 LW858_23725 PF09560 Sporulation protein YunB (Spo_YunB) LW858_23730 PF08827 Domain of unknown function (DUF1805) LW858_23735 PF02872 5'-nucleotidase, C-terminal domain LW858_23740 PF01458 Uncharacterized protein family (UPF0051) LW858_23745 PF01592 NifU-like N terminal domain LW858_23750 PF00266 Aminotransferase class-V LW858_23755 PF01458 Uncharacterized protein family (UPF0051) LW858_23760 PF00005 ABC transporter LW858_23765 PF03180 NLPA lipoprotein LW858_23770 PF03180 NLPA lipoprotein LW858_23775 PF00528 Binding-protein-dependent transport system inner membrane component LW858_23780 PF00005 ABC transporter LW858_23780 PF09383 NIL domain LW858_23790 PF00085 Thioredoxin LW858_23795 PF01751 Toprim domain LW858_23800 PF01597 Glycine cleavage H-protein LW858_23805 PF03960 ArsC family LW858_23835 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LW858_23835 PF00056 lactate/malate dehydrogenase, NAD binding domain LW858_23860 PF13305 Tetracyclin repressor-like, C-terminal domain LW858_23860 PF00440 Bacterial regulatory proteins, tetR family LW858_23865 PF00753 Metallo-beta-lactamase superfamily LW858_23870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LW858_23870 PF02770 Acyl-CoA dehydrogenase, middle domain LW858_23870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LW858_23875 PF00108 Thiolase, N-terminal domain LW858_23875 PF02803 Thiolase, C-terminal domain LW858_23880 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LW858_23880 PF00378 Enoyl-CoA hydratase/isomerase LW858_23880 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LW858_23885 PF14115 YuzL-like protein LW858_23890 PF00768 D-alanyl-D-alanine carboxypeptidase LW858_23890 PF07943 Penicillin-binding protein 5, C-terminal domain LW858_23895 PF01619 Proline dehydrogenase LW858_23900 PF10835 Protein of unknown function (DUF2573) LW858_23905 PF01910 Thiamine-binding protein LW858_23910 PF02743 Cache domain LW858_23910 PF00672 HAMP domain LW858_23910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LW858_23925 PF07690 Major Facilitator Superfamily LW858_23950 PF13520 Amino acid permease LW858_23970 PF02096 60Kd inner membrane protein LW858_23980 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LW858_23980 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LW858_24015 PF09335 SNARE associated Golgi protein LW858_24025 PF03734 L,D-transpeptidase catalytic domain LW858_24025 PF17969 L,D-transpeptidase C-terminal domain LW858_24030 PF00486 Transcriptional regulatory protein, C terminal LW858_24030 PF00072 Response regulator receiver domain LW858_24035 PF00989 PAS fold LW858_24035 PF00512 His Kinase A (phospho-acceptor) domain LW858_24035 PF16736 Single Cache-like LW858_24035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_24050 PF08264 Anticodon-binding domain of tRNA LW858_24050 PF09334 tRNA synthetases class I (M) LW858_24060 PF02743 Cache domain LW858_24060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LW858_24060 PF00672 HAMP domain LW858_24075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LW858_24075 PF00672 HAMP domain LW858_24075 PF02743 Cache domain LW858_24080 PF01883 Iron-sulfur cluster assembly protein LW858_24085 PF07504 Fungalysin/Thermolysin Propeptide Motif LW858_24085 PF02868 Thermolysin metallopeptidase, alpha-helical domain LW858_24085 PF01447 Thermolysin metallopeptidase, catalytic domain LW858_24085 PF03413 Peptidase propeptide and YPEB domain LW858_24090 PF02678 Pirin LW858_24090 PF17954 Quercetinase C-terminal cupin domain LW858_24095 PF01047 MarR family LW858_24105 PF09335 SNARE associated Golgi protein LW858_24110 PF00999 Sodium/hydrogen exchanger family LW858_24115 PF02080 TrkA-C domain LW858_24120 PF01235 Sodium:alanine symporter family LW858_24125 PF00210 Ferritin-like domain LW858_24140 PF03641 Possible lysine decarboxylase LW858_24150 PF00210 Ferritin-like domain LW858_24155 PF07786 Protein of unknown function (DUF1624) LW858_24155 PF04235 Protein of unknown function (DUF418) LW858_24160 PF01773 Na+ dependent nucleoside transporter N-terminus LW858_24160 PF07662 Na+ dependent nucleoside transporter C-terminus LW858_24165 PF07662 Na+ dependent nucleoside transporter C-terminus LW858_24165 PF01773 Na+ dependent nucleoside transporter N-terminus LW858_24170 PF01235 Sodium:alanine symporter family LW858_24175 PF01235 Sodium:alanine symporter family LW858_24180 PF13460 NAD(P)H-binding LW858_24200 PF00248 Aldo/keto reductase family LW858_24205 PF07690 Major Facilitator Superfamily LW858_24210 PF01638 HxlR-like helix-turn-helix LW858_24215 PF07849 Protein of unknown function (DUF1641) LW858_24220 PF07992 Pyridine nucleotide-disulphide oxidoreductase LW858_24225 PF00579 tRNA synthetases class I (W and Y) LW858_24225 PF01479 S4 domain LW858_24230 PF01565 FAD binding domain LW858_24230 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LW858_24250 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LW858_24255 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LW858_24270 PF07690 Major Facilitator Superfamily LW858_24275 PF12848 ABC transporter LW858_24275 PF00005 ABC transporter LW858_24280 PF13302 Acetyltransferase (GNAT) domain LW858_24290 PF06146 Phosphate-starvation-inducible E LW858_24305 PF13610 DDE domain LW858_24315 PF01668 SmpB protein LW858_24325 PF00575 S1 RNA binding domain LW858_24325 PF08206 Ribonuclease B OB domain LW858_24325 PF17876 Cold shock domain LW858_24325 PF00773 RNB domain LW858_24330 PF12146 Serine aminopeptidase, S33 LW858_24335 PF03840 Preprotein translocase SecG subunit LW858_24340 PF04172 LrgB-like family LW858_24345 PF03788 LrgA family LW858_24350 PF01156 Inosine-uridine preferring nucleoside hydrolase LW858_24360 PF03952 Enolase, N-terminal domain LW858_24360 PF00113 Enolase, C-terminal TIM barrel domain LW858_24365 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LW858_24365 PF01676 Metalloenzyme superfamily LW858_24370 PF00121 Triosephosphate isomerase LW858_24375 PF00162 Phosphoglycerate kinase LW858_24380 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LW858_24380 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LW858_24385 PF04198 Putative sugar-binding domain LW858_24395 PF00309 Sigma-54 factor, Activator interacting domain (AID) LW858_24395 PF04963 Sigma-54 factor, core binding domain LW858_24395 PF04552 Sigma-54, DNA binding domain LW858_24405 PF00005 ABC transporter LW858_24405 PF13732 Domain of unknown function (DUF4162) LW858_24410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_24410 PF07730 Histidine kinase LW858_24415 PF00196 Bacterial regulatory proteins, luxR family LW858_24415 PF00072 Response regulator receiver domain LW858_24435 PF03862 SpoVAC/SpoVAEB sporulation membrane protein LW858_24440 PF07451 Stage V sporulation protein AD (SpoVAD) LW858_24445 PF03862 SpoVAC/SpoVAEB sporulation membrane protein LW858_24455 PF04239 Protein of unknown function (DUF421) LW858_24460 PF00574 Clp protease LW858_24465 PF00381 PTS HPr component phosphorylation site LW858_24470 PF10298 WhiA N-terminal LAGLIDADG-like domain LW858_24470 PF14527 WhiA LAGLIDADG-like domain LW858_24470 PF02650 WhiA C-terminal HTH domain LW858_24475 PF01933 Uncharacterised protein family UPF0052 LW858_24480 PF03668 P-loop ATPase protein family LW858_24485 PF00293 NUDIX domain LW858_24505 PF07992 Pyridine nucleotide-disulphide oxidoreductase LW858_24515 PF14602 Hexapeptide repeat of succinyl-transferase LW858_24520 PF13419 Haloacid dehalogenase-like hydrolase LW858_24525 PF01790 Prolipoprotein diacylglyceryl transferase LW858_24530 PF02603 HPr Serine kinase N terminus LW858_24530 PF07475 HPr Serine kinase C-terminal domain LW858_24535 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV LW858_24540 PF17760 UvrA interaction domain LW858_24540 PF17755 UvrA DNA-binding domain LW858_24540 PF00005 ABC transporter LW858_24545 PF00271 Helicase conserved C-terminal domain LW858_24545 PF04851 Type III restriction enzyme, res subunit LW858_24545 PF02151 UvrB/uvrC motif LW858_24545 PF12344 Ultra-violet resistance protein B LW858_24545 PF17757 UvrB interaction domain LW858_24560 PF07739 TipAS antibiotic-recognition domain LW858_24560 PF13411 MerR HTH family regulatory protein LW858_24575 PF03601 Conserved hypothetical protein 698 LW858_24580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LW858_24580 PF03466 LysR substrate binding domain LW858_24585 PF09278 MerR, DNA binding LW858_24585 PF00376 MerR family regulatory protein LW858_24590 PF03358 NADPH-dependent FMN reductase LW858_24595 PF12848 ABC transporter LW858_24595 PF00005 ABC transporter LW858_24600 PF01906 Putative heavy-metal-binding LW858_24605 PF00664 ABC transporter transmembrane region LW858_24605 PF00005 ABC transporter LW858_24610 PF17820 PDZ domain LW858_24615 PF03572 Peptidase family S41 LW858_24615 PF17820 PDZ domain LW858_24615 PF01471 Putative peptidoglycan binding domain LW858_24620 PF02687 FtsX-like permease family LW858_24620 PF18075 FtsX extracellular domain LW858_24625 PF00005 ABC transporter LW858_24630 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LW858_24640 PF07516 SecA Wing and Scaffold domain LW858_24640 PF07517 SecA DEAD-like domain LW858_24640 PF02810 SEC-C motif LW858_24640 PF01043 SecA preprotein cross-linking domain LW858_24655 PF00005 ABC transporter LW858_24685 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus LW858_24685 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LW858_24690 PF00313 'Cold-shock' DNA-binding domain LW858_24700 PF00271 Helicase conserved C-terminal domain LW858_24700 PF04851 Type III restriction enzyme, res subunit LW858_24705 PF00877 NlpC/P60 family LW858_24710 PF01638 HxlR-like helix-turn-helix LW858_24715 PF02645 Uncharacterised protein, DegV family COG1307 LW858_24720 PF01205 Uncharacterized protein family UPF0029 LW858_24720 PF09186 Domain of unknown function (DUF1949) LW858_24725 PF03816 Cell envelope-related transcriptional attenuator domain LW858_24730 PF02350 UDP-N-acetylglucosamine 2-epimerase LW858_24735 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LW858_24735 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LW858_24735 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LW858_24740 PF00953 Glycosyl transferase family 4 LW858_24745 PF01522 Polysaccharide deacetylase LW858_24760 PF02417 Chromate transporter LW858_24765 PF04794 YdjC-like protein LW858_24770 PF11975 Family 4 glycosyl hydrolase C-terminal domain LW858_24770 PF02056 Family 4 glycosyl hydrolase LW858_24775 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LW858_24780 PF02378 Phosphotransferase system, EIIC LW858_24785 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LW858_24800 PF02675 S-adenosylmethionine decarboxylase LW858_24805 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LW858_24810 PF02378 Phosphotransferase system, EIIC LW858_24815 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LW858_24830 PF13610 DDE domain LW858_24850 PF13610 DDE domain LW858_24860 PF03466 LysR substrate binding domain LW858_24860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LW858_24885 PF01654 Cytochrome bd terminal oxidase subunit I LW858_24890 PF02322 Cytochrome bd terminal oxidase subunit II LW858_24905 PF01964 Radical SAM ThiC family LW858_24905 PF13667 ThiC-associated domain LW858_24910 PF02652 L-lactate permease LW858_24920 PF09988 Uncharacterized metal-binding protein (DUF2227) LW858_24930 PF00884 Sulfatase LW858_24935 PF01063 Amino-transferase class IV LW858_24940 PF01476 LysM domain LW858_24940 PF00877 NlpC/P60 family LW858_24945 PF07662 Na+ dependent nucleoside transporter C-terminus LW858_24945 PF01773 Na+ dependent nucleoside transporter N-terminus LW858_24960 PF02028 BCCT, betaine/carnitine/choline family transporter LW858_24965 PF06725 3D domain LW858_24965 PF01476 LysM domain LW858_24995 PF04434 SWIM zinc finger LW858_25000 PF12419 SNF2 Helicase protein LW858_25000 PF00271 Helicase conserved C-terminal domain LW858_25000 PF00176 SNF2 family N-terminal domain LW858_25030 PF04542 Sigma-70 region 2 LW858_25030 PF04545 Sigma-70, region 4 LW858_25035 PF04893 Yip1 domain LW858_25040 PF12704 MacB-like periplasmic core domain LW858_25040 PF02687 FtsX-like permease family LW858_25045 PF00005 ABC transporter LW858_25220 PF00589 Phage integrase family LW858_25220 PF14659 Phage integrase, N-terminal SAM-like domain LW858_25225 PF02540 NAD synthase LW858_25225 PF00958 GMP synthase C terminal domain LW858_25225 PF00117 Glutamine amidotransferase class-I LW858_25230 PF00118 TCP-1/cpn60 chaperonin family LW858_25235 PF00166 Chaperonin 10 Kd subunit LW858_25240 PF02517 CPBP intramembrane metalloprotease LW858_25250 PF06971 Putative DNA-binding protein N-terminus LW858_25250 PF02629 CoA binding domain LW858_25255 PF12848 ABC transporter LW858_25255 PF00005 ABC transporter LW858_25255 PF16326 ABC transporter C-terminal domain LW858_25260 PF00814 Glycoprotease family LW858_25265 PF00583 Acetyltransferase (GNAT) family LW858_25270 PF00814 Glycoprotease family LW858_25275 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LW858_25365 PF10263 SprT-like family LW858_25365 PF17283 SprT-like zinc ribbon domain LW858_25375 PF09371 Tex-like protein N-terminal domain LW858_25375 PF16921 Tex protein YqgF-like domain LW858_25375 PF17674 HHH domain LW858_25375 PF00575 S1 RNA binding domain LW858_25380 PF02371 Transposase IS116/IS110/IS902 family LW858_25380 PF01548 Transposase LW858_25385 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system LW858_25390 PF01402 Ribbon-helix-helix protein, copG family LW858_25395 PF00842 Alanine racemase, C-terminal domain LW858_25395 PF01168 Alanine racemase, N-terminal domain LW858_25410 PF01648 4'-phosphopantetheinyl transferase superfamily LW858_25415 PF01694 Rhomboid family LW858_25435 PF00270 DEAD/DEAH box helicase LW858_25435 PF00271 Helicase conserved C-terminal domain LW858_25440 PF01225 Mur ligase family, catalytic domain LW858_25440 PF08245 Mur ligase middle domain LW858_25440 PF02875 Mur ligase family, glutamate ligase domain LW858_25445 PF01820 D-ala D-ala ligase N-terminus LW858_25445 PF07478 D-ala D-ala ligase C-terminus LW858_25450 PF07690 Major Facilitator Superfamily LW858_25455 PF13520 Amino acid permease LW858_25465 PF01557 Fumarylacetoacetate (FAA) hydrolase family LW858_25470 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LW858_25510 PF00005 ABC transporter LW858_25510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LW858_25515 PF00005 ABC transporter LW858_25515 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LW858_25520 PF12911 N-terminal TM domain of oligopeptide transport permease C LW858_25520 PF00528 Binding-protein-dependent transport system inner membrane component LW858_25525 PF00528 Binding-protein-dependent transport system inner membrane component LW858_25530 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LW858_25540 PF00005 ABC transporter LW858_25540 PF12848 ABC transporter LW858_25540 PF16326 ABC transporter C-terminal domain LW858_25565 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) LW858_25585 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LW858_25585 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LW858_25595 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LW858_25595 PF00356 Bacterial regulatory proteins, lacI family LW858_25605 PF01553 Acyltransferase LW858_25615 PF14142 YrzO-like protein LW858_25620 PF00892 EamA-like transporter family LW858_25625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LW858_25625 PF03466 LysR substrate binding domain LW858_25635 PF12728 Helix-turn-helix domain LW858_25635 PF12727 PBP superfamily domain LW858_25645 PF00528 Binding-protein-dependent transport system inner membrane component LW858_25650 PF06800 Sugar transport protein LW858_25655 PF03807 NADP oxidoreductase coenzyme F420-dependent LW858_25655 PF14748 Pyrroline-5-carboxylate reductase dimerisation LW858_25660 PF00248 Aldo/keto reductase family LW858_25665 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LW858_25670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LW858_25685 PF12833 Helix-turn-helix domain LW858_25695 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LW858_25700 PF00005 ABC transporter LW858_25700 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LW858_25710 PF12911 N-terminal TM domain of oligopeptide transport permease C LW858_25710 PF00528 Binding-protein-dependent transport system inner membrane component LW858_25715 PF00528 Binding-protein-dependent transport system inner membrane component LW858_25740 PF07690 Major Facilitator Superfamily LW858_25750 PF07690 Major Facilitator Superfamily LW858_25765 PF08240 Alcohol dehydrogenase GroES-like domain LW858_25765 PF00107 Zinc-binding dehydrogenase LW858_25770 PF03180 NLPA lipoprotein LW858_25775 PF00005 ABC transporter LW858_25775 PF09383 NIL domain LW858_25780 PF00528 Binding-protein-dependent transport system inner membrane component LW858_25820 PF00326 Prolyl oligopeptidase family LW858_25820 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region LW858_25835 PF01380 SIS domain LW858_25845 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LW858_25845 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LW858_25845 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LW858_25845 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LW858_25850 PF07949 YbbR-like protein LW858_25855 PF02457 DisA bacterial checkpoint controller nucleotide-binding LW858_25860 PF00491 Arginase family LW858_25865 PF02595 Glycerate kinase family LW858_25935 PF01522 Polysaccharide deacetylase LW858_25940 PF14089 KinB-signalling pathway activation in sporulation LW858_25945 PF17898 Spore germination GerD central core domain LW858_25950 PF10609 NUBPL iron-transfer P-loop NTPase LW858_25955 PF01520 N-acetylmuramoyl-L-alanine amidase LW858_25965 PF00380 Ribosomal protein S9/S16 LW858_25970 PF00572 Ribosomal protein L13 LW858_25975 PF01416 tRNA pseudouridine synthase LW858_25980 PF02361 Cobalt transport protein LW858_25985 PF00005 ABC transporter LW858_25990 PF00005 ABC transporter LW858_25995 PF01196 Ribosomal protein L17 LW858_26000 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LW858_26000 PF01000 RNA polymerase Rpb3/RpoA insert domain LW858_26000 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LW858_26005 PF00411 Ribosomal protein S11 LW858_26010 PF00416 Ribosomal protein S13/S18 LW858_26015 PF00444 Ribosomal protein L36 LW858_26020 PF01176 Translation initiation factor 1A / IF-1 LW858_26025 PF00557 Metallopeptidase family M24 LW858_26030 PF05191 Adenylate kinase, active site lid LW858_26035 PF00344 SecY translocase LW858_26040 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LW858_26045 PF00327 Ribosomal protein L30p/L7e LW858_26050 PF03719 Ribosomal protein S5, C-terminal domain LW858_26050 PF00333 Ribosomal protein S5, N-terminal domain LW858_26055 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LW858_26060 PF00347 Ribosomal protein L6 LW858_26065 PF00410 Ribosomal protein S8 LW858_26070 PF00253 Ribosomal protein S14p/S29e LW858_26075 PF00281 Ribosomal protein L5 LW858_26075 PF00673 ribosomal L5P family C-terminus LW858_26080 PF00467 KOW motif LW858_26080 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LW858_26085 PF00238 Ribosomal protein L14p/L23e LW858_26090 PF00366 Ribosomal protein S17 LW858_26095 PF00831 Ribosomal L29 protein LW858_26100 PF00252 Ribosomal protein L16p/L10e LW858_26105 PF07650 KH domain LW858_26105 PF00189 Ribosomal protein S3, C-terminal domain LW858_26110 PF00237 Ribosomal protein L22p/L17e LW858_26115 PF00203 Ribosomal protein S19 LW858_26120 PF00181 Ribosomal Proteins L2, RNA binding domain LW858_26120 PF03947 Ribosomal Proteins L2, C-terminal domain LW858_26125 PF00276 Ribosomal protein L23 LW858_26130 PF00573 Ribosomal protein L4/L1 family LW858_26135 PF00297 Ribosomal protein L3 LW858_26140 PF00338 Ribosomal protein S10p/S20e LW858_26145 PF03143 Elongation factor Tu C-terminal domain LW858_26145 PF03144 Elongation factor Tu domain 2 LW858_26145 PF00009 Elongation factor Tu GTP binding domain LW858_26150 PF14492 Elongation Factor G, domain II LW858_26150 PF03144 Elongation factor Tu domain 2 LW858_26150 PF00679 Elongation factor G C-terminus LW858_26150 PF03764 Elongation factor G, domain IV LW858_26150 PF00009 Elongation factor Tu GTP binding domain LW858_26155 PF00177 Ribosomal protein S7p/S5e LW858_26160 PF00164 Ribosomal protein S12/S23 LW858_26165 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family LW858_26170 PF04983 RNA polymerase Rpb1, domain 3 LW858_26170 PF05000 RNA polymerase Rpb1, domain 4 LW858_26170 PF04997 RNA polymerase Rpb1, domain 1 LW858_26170 PF00623 RNA polymerase Rpb1, domain 2 LW858_26170 PF04998 RNA polymerase Rpb1, domain 5 LW858_26175 PF04560 RNA polymerase Rpb2, domain 7 LW858_26175 PF00562 RNA polymerase Rpb2, domain 6 LW858_26175 PF10385 RNA polymerase beta subunit external 1 domain LW858_26175 PF04563 RNA polymerase beta subunit LW858_26175 PF04561 RNA polymerase Rpb2, domain 2 LW858_26175 PF04565 RNA polymerase Rpb2, domain 3 LW858_26180 PF05175 Methyltransferase small domain LW858_26185 PF16320 Ribosomal protein L7/L12 dimerisation domain LW858_26185 PF00542 Ribosomal protein L7/L12 C-terminal domain LW858_26190 PF00466 Ribosomal protein L10 LW858_26195 PF00687 Ribosomal protein L1p/L10e family LW858_26200 PF00298 Ribosomal protein L11, RNA binding domain LW858_26200 PF03946 Ribosomal protein L11, N-terminal domain LW858_26205 PF00467 KOW motif LW858_26205 PF02357 Transcription termination factor nusG LW858_26210 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LW858_26215 PF00471 Ribosomal protein L33 LW858_26220 PF04542 Sigma-70 region 2 LW858_26220 PF08281 Sigma-70, region 4 LW858_26225 PF05991 YacP-like NYN domain LW858_26230 PF08032 RNA 2'-O ribose methyltransferase substrate binding LW858_26230 PF00588 SpoU rRNA Methylase family LW858_26235 PF00636 Ribonuclease III domain LW858_26240 PF09190 DALR domain LW858_26240 PF01406 tRNA synthetases class I (C) catalytic domain LW858_26245 PF00132 Bacterial transferase hexapeptide (six repeats) LW858_26245 PF06426 Serine acetyltransferase, N-terminal LW858_26250 PF00749 tRNA synthetases class I (E and Q), catalytic domain LW858_26255 PF02542 YgbB family LW858_26260 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LW858_26270 PF02457 DisA bacterial checkpoint controller nucleotide-binding LW858_26270 PF10635 DisA bacterial checkpoint controller linker region LW858_26275 PF18073 Rubredoxin metal binding domain LW858_26280 PF10431 C-terminal, D2-small domain, of ClpB protein LW858_26280 PF07724 AAA domain (Cdc48 subfamily) LW858_26280 PF00004 ATPase family associated with various cellular activities (AAA) LW858_26280 PF02861 Clp amino terminal domain, pathogenicity island component LW858_26280 PF17871 AAA lid domain LW858_26285 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain LW858_26290 PF02151 UvrB/uvrC motif LW858_26295 PF05848 CtsR N-terminal HTH domain LW858_26295 PF17727 CtsR C-terminal dimerization domain LW858_26375 PF00152 tRNA synthetases class II (D, K and N) LW858_26375 PF01336 OB-fold nucleic acid binding domain LW858_26380 PF01207 Dihydrouridine synthase (Dus) LW858_26385 PF01381 Helix-turn-helix LW858_26390 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LW858_26395 PF02152 Dihydroneopterin aldolase LW858_26400 PF00809 Pterin binding enzyme LW858_26405 PF01063 Amino-transferase class IV LW858_26410 PF00117 Glutamine amidotransferase class-I LW858_26415 PF00425 chorismate binding enzyme LW858_26415 PF04715 Anthranilate synthase component I, N terminal region LW858_26420 PF00291 Pyridoxal-phosphate dependent enzyme LW858_26425 PF01430 Hsp33 protein LW858_26430 PF03309 Type III pantothenate kinase LW858_26440 PF00004 ATPase family associated with various cellular activities (AAA) LW858_26440 PF06480 FtsH Extracellular LW858_26440 PF17862 AAA+ lid domain LW858_26440 PF01434 Peptidase family M41 LW858_26445 PF00156 Phosphoribosyl transferase domain LW858_26450 PF11734 TilS substrate C-terminal domain LW858_26450 PF09179 TilS substrate binding domain LW858_26450 PF01171 PP-loop family LW858_26460 PF07228 Stage II sporulation protein E (SpoIIE) LW858_26475 PF00575 S1 RNA binding domain LW858_26485 PF09578 Spore cortex protein YabQ (Spore_YabQ) LW858_26490 PF07873 YabP family LW858_26495 PF01479 S4 domain LW858_26500 PF03819 MazG nucleotide pyrophosphohydrolase domain LW858_26500 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LW858_26505 PF01943 Polysaccharide biosynthesis protein LW858_26505 PF14667 Polysaccharide biosynthesis C-terminal domain LW858_26510 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LW858_26510 PF15714 Stage V sporulation protein T C-terminal, transcription factor LW858_26515 PF03461 TRCF domain LW858_26515 PF00271 Helicase conserved C-terminal domain LW858_26515 PF00270 DEAD/DEAH box helicase LW858_26515 PF02559 CarD-like/TRCF domain LW858_26515 PF17757 UvrB interaction domain LW858_26525 PF01195 Peptidyl-tRNA hydrolase LW858_26530 PF14572 Phosphoribosyl synthetase-associated domain LW858_26530 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LW858_26535 PF00132 Bacterial transferase hexapeptide (six repeats) LW858_26535 PF00483 Nucleotidyl transferase LW858_26540 PF04026 SpoVG LW858_26545 PF01042 Endoribonuclease L-PSP LW858_26550 PF09182 Bacterial purine repressor, N-terminal LW858_26550 PF00156 Phosphoribosyl transferase domain LW858_26555 PF08544 GHMP kinases C terminal LW858_26555 PF00288 GHMP kinases N terminal domain LW858_26560 PF00269 Small, acid-soluble spore proteins, alpha/beta type LW858_26565 PF06257 Biofilm formation stimulator VEG LW858_26570 PF05582 YabG peptidase U57 LW858_26575 PF00398 Ribosomal RNA adenine dimethylase LW858_26580 PF13331 Domain of unknown function (DUF4093) LW858_26580 PF13662 Toprim domain LW858_26585 PF01026 TatD related DNase LW858_26590 PF01588 Putative tRNA binding domain LW858_26590 PF08264 Anticodon-binding domain of tRNA LW858_26590 PF09334 tRNA synthetases class I (M) LW858_26595 PF18277 AbrB C-terminal domain LW858_26595 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LW858_26600 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LW858_26605 PF01541 GIY-YIG catalytic domain LW858_26610 PF05175 Methyltransferase small domain LW858_26615 PF06156 Initiation control protein YabA LW858_26620 PF04468 PSP1 C-terminal conserved region LW858_26625 PF09115 DNA polymerase III, delta subunit, C terminal LW858_26630 PF02223 Thymidylate kinase LW858_26635 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LW858_26635 PF01276 Orn/Lys/Arg decarboxylase, major domain LW858_26670 PF07441 SigmaK-factor processing regulatory protein BofA LW858_26675 PF10704 Protein of unknown function (DUF2508) LW858_26680 PF13662 Toprim domain LW858_26680 PF02132 RecR protein LW858_26685 PF02575 YbaB/EbfC DNA-binding family LW858_26690 PF12169 DNA polymerase III subunits gamma and tau domain III LW858_26700 PF14437 MafB19-like deaminase LW858_26705 PF00857 Isochorismatase family LW858_26710 PF01712 Deoxynucleoside kinase LW858_26715 PF01712 Deoxynucleoside kinase LW858_26735 PF02403 Seryl-tRNA synthetase N-terminal domain LW858_26735 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LW858_26740 PF01174 SNO glutamine amidotransferase family LW858_26745 PF01680 SOR/SNZ family LW858_26750 PF00768 D-alanyl-D-alanine carboxypeptidase LW858_26750 PF07943 Penicillin-binding protein 5, C-terminal domain LW858_26755 PF00571 CBS domain LW858_26755 PF00478 IMP dehydrogenase / GMP reductase domain LW858_26760 PF14175 YaaC-like Protein LW858_26790 PF03989 DNA gyrase C-terminal domain, beta-propeller LW858_26790 PF00521 DNA gyrase/topoisomerase IV, subunit A LW858_26795 PF00204 DNA gyrase B LW858_26795 PF00986 DNA gyrase B subunit, carboxyl terminus LW858_26795 PF01751 Toprim domain LW858_26795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_26800 PF02463 RecF/RecN/SMC N terminal domain LW858_26810 PF02768 DNA polymerase III beta subunit, C-terminal domain LW858_26810 PF02767 DNA polymerase III beta subunit, central domain LW858_26810 PF00712 DNA polymerase III beta subunit, N-terminal domain LW858_26815 PF08299 Bacterial dnaA protein helix-turn-helix LW858_26815 PF11638 DnaA N-terminal domain LW858_26815 PF00308 Bacterial dnaA protein LW858_26820 PF00468 Ribosomal protein L34 LW858_26825 PF00825 Ribonuclease P LW858_26830 PF02096 60Kd inner membrane protein LW858_26835 PF14804 Jag N-terminus LW858_26835 PF01424 R3H domain LW858_26840 PF01926 50S ribosome-binding GTPase LW858_26840 PF12631 MnmE helical domain LW858_26840 PF10396 GTP-binding protein TrmE N-terminus LW858_26845 PF13932 GidA associated domain LW858_26845 PF01134 Glucose inhibited division protein A LW858_26850 PF02527 rRNA small subunit methyltransferase G LW858_26855 PF17762 HTH domain found in ParB protein LW858_26855 PF02195 ParB-like nuclease domain LW858_26860 PF13614 AAA domain LW858_26865 PF02195 ParB-like nuclease domain LW858_26865 PF17762 HTH domain found in ParB protein LW858_26870 PF06866 Protein of unknown function (DUF1256) LW858_26875 PF00924 Mechanosensitive ion channel LW858_26880 PF06107 Bacterial protein of unknown function (DUF951) LW858_26890 PF01926 50S ribosome-binding GTPase LW858_26890 PF06071 Protein of unknown function (DUF933) LW858_26895 PF01250 Ribosomal protein S6 LW858_26900 PF00436 Single-strand binding protein family LW858_26905 PF01084 Ribosomal protein S18 LW858_26910 PF09991 Predicted membrane protein (DUF2232) LW858_26915 PF01368 DHH family LW858_26915 PF02272 DHHA1 domain LW858_26920 PF03948 Ribosomal protein L9, C-terminal domain LW858_26920 PF01281 Ribosomal protein L9, N-terminal domain LW858_26925 PF00772 DnaB-like helicase N terminal domain LW858_26925 PF03796 DnaB-like helicase C terminal domain LW858_26930 PF00709 Adenylosuccinate synthetase LW858_26955 PF00072 Response regulator receiver domain LW858_26955 PF00486 Transcriptional regulatory protein, C terminal LW858_26960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_26960 PF00512 His Kinase A (phospho-acceptor) domain LW858_26960 PF13426 PAS domain LW858_26960 PF00672 HAMP domain LW858_26970 PF09648 YycH protein LW858_26975 PF00753 Metallo-beta-lactamase superfamily LW858_26980 PF13180 PDZ domain LW858_26990 PF02590 Predicted SPOUT methyltransferase LW858_26995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_26995 PF00512 His Kinase A (phospho-acceptor) domain LW858_26995 PF00989 PAS fold LW858_26995 PF13188 PAS domain LW858_26995 PF13426 PAS domain LW858_27005 PF08439 Oligopeptidase F LW858_27005 PF01432 Peptidase family M3 LW858_27010 PF00478 IMP dehydrogenase / GMP reductase domain LW858_27025 PF03006 Haemolysin-III related LW858_27030 PF16363 GDP-mannose 4,6 dehydratase LW858_27035 PF02293 AmiS/UreI family transporter LW858_27055 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LW858_27055 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LW858_27060 PF02898 Nitric oxide synthase, oxygenase domain LW858_27065 PF02028 BCCT, betaine/carnitine/choline family transporter LW858_27070 PF07690 Major Facilitator Superfamily LW858_27075 PF07694 5TMR of 5TMR-LYT LW858_27075 PF06580 Histidine kinase LW858_27075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_27075 PF13492 GAF domain LW858_27085 PF03788 LrgA family LW858_27090 PF04172 LrgB-like family LW858_27095 PF01594 AI-2E family transporter LW858_27100 PF01641 SelR domain LW858_27100 PF01625 Peptide methionine sulfoxide reductase LW858_27110 PF00873 AcrB/AcrD/AcrF family LW858_27115 PF00440 Bacterial regulatory proteins, tetR family LW858_27125 PF12848 ABC transporter LW858_27125 PF00005 ABC transporter LW858_27130 PF00535 Glycosyl transferase family 2 LW858_27145 PF00535 Glycosyl transferase family 2 LW858_27160 PF00535 Glycosyl transferase family 2 LW858_27165 PF03061 Thioesterase superfamily LW858_27180 PF03458 UPF0126 domain LW858_27190 PF00534 Glycosyl transferases group 1 LW858_27190 PF13439 Glycosyltransferase Family 4 LW858_27195 PF03808 Glycosyl transferase WecB/TagA/CpsF family LW858_27200 PF07690 Major Facilitator Superfamily LW858_27205 PF04397 LytTr DNA-binding domain LW858_27205 PF00072 Response regulator receiver domain LW858_27210 PF02554 Carbon starvation protein CstA LW858_27210 PF13722 5TM C-terminal transporter carbon starvation CstA LW858_27215 PF04328 Selenoprotein, putative LW858_27220 PF00990 Diguanylate cyclase, GGDEF domain LW858_27220 PF07694 5TMR of 5TMR-LYT LW858_27225 PF08543 Phosphomethylpyrimidine kinase LW858_27235 PF00196 Bacterial regulatory proteins, luxR family LW858_27235 PF00072 Response regulator receiver domain LW858_27240 PF02525 Flavodoxin-like fold LW858_27245 PF00027 Cyclic nucleotide-binding domain LW858_27250 PF13419 Haloacid dehalogenase-like hydrolase LW858_27260 PF01053 Cys/Met metabolism PLP-dependent enzyme LW858_27265 PF04204 Homoserine O-succinyltransferase LW858_27270 PF01842 ACT domain LW858_27270 PF00742 Homoserine dehydrogenase LW858_27270 PF03447 Homoserine dehydrogenase, NAD binding domain LW858_27280 PF00356 Bacterial regulatory proteins, lacI family LW858_27280 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LW858_27285 PF13472 GDSL-like Lipase/Acylhydrolase family LW858_27290 PF00005 ABC transporter LW858_27295 PF12679 ABC-2 family transporter protein LW858_27300 PF03167 Uracil DNA glycosylase superfamily LW858_27310 PF12823 Domain of unknown function (DUF3817) LW858_27320 PF00860 Permease family LW858_27325 PF07885 Ion channel LW858_27325 PF02254 TrkA-N domain LW858_27335 PF04241 Protein of unknown function (DUF423) LW858_27340 PF09671 Spore coat protein (Spore_GerQ) LW858_27345 PF07486 Cell Wall Hydrolase LW858_27350 PF00768 D-alanyl-D-alanine carboxypeptidase LW858_27350 PF07943 Penicillin-binding protein 5, C-terminal domain LW858_27355 PF06778 Chlorite dismutase LW858_27360 PF01515 Phosphate acetyl/butaryl transferase LW858_27365 PF03099 Biotin/lipoate A/B protein ligase family LW858_27375 PF07293 Protein of unknown function (DUF1450) LW858_27380 PF01032 FecCD transport family LW858_27385 PF01032 FecCD transport family LW858_27390 PF00005 ABC transporter LW858_27395 PF01497 Periplasmic binding protein LW858_27400 PF01966 HD domain LW858_27405 PF01361 Tautomerase enzyme LW858_27410 PF02163 Peptidase family M50 LW858_27415 PF08741 YwhD family LW858_27420 PF00912 Transglycosylase LW858_27420 PF00905 Penicillin binding protein transpeptidase domain LW858_27425 PF03009 Glycerophosphoryl diester phosphodiesterase family LW858_27430 PF13411 MerR HTH family regulatory protein LW858_27435 PF07690 Major Facilitator Superfamily LW858_27440 PF17284 Spermidine synthase tetramerisation domain LW858_27445 PF00491 Arginase family LW858_27470 PF09148 Domain of unknown function (DUF1934) LW858_27475 PF05746 DALR anticodon binding domain LW858_27475 PF03485 Arginyl tRNA synthetase N terminal domain LW858_27475 PF00750 tRNA synthetases class I (R) LW858_27480 PF04542 Sigma-70 region 2 LW858_27480 PF08281 Sigma-70, region 4 LW858_27500 PF04389 Peptidase family M28 LW858_27500 PF02225 PA domain LW858_27510 PF00557 Metallopeptidase family M24 LW858_27525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_27525 PF07730 Histidine kinase LW858_27530 PF00072 Response regulator receiver domain LW858_27530 PF00196 Bacterial regulatory proteins, luxR family LW858_27535 PF01447 Thermolysin metallopeptidase, catalytic domain LW858_27535 PF02868 Thermolysin metallopeptidase, alpha-helical domain LW858_27535 PF03413 Peptidase propeptide and YPEB domain LW858_27535 PF07504 Fungalysin/Thermolysin Propeptide Motif LW858_27560 PF00990 Diguanylate cyclase, GGDEF domain LW858_27560 PF00563 EAL domain LW858_27560 PF03707 Bacterial signalling protein N terminal repeat LW858_27565 PF03851 UV-endonuclease UvdE LW858_27570 PF13091 PLD-like domain LW858_27575 PF02754 Cysteine-rich domain LW858_27575 PF13183 4Fe-4S dicluster domain LW858_27580 PF02803 Thiolase, C-terminal domain LW858_27580 PF00108 Thiolase, N-terminal domain LW858_27585 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LW858_27585 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LW858_27590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LW858_27590 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LW858_27590 PF02770 Acyl-CoA dehydrogenase, middle domain LW858_27595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LW858_27595 PF02770 Acyl-CoA dehydrogenase, middle domain LW858_27595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LW858_27605 PF05066 HB1, ASXL, restriction endonuclease HTH domain LW858_27610 PF06418 CTP synthase N-terminus LW858_27610 PF00117 Glutamine amidotransferase class-I LW858_27615 PF10740 Domain of unknown function (DUF2529) LW858_27620 PF00072 Response regulator receiver domain LW858_27625 PF01116 Fructose-bisphosphate aldolase class-II LW858_27630 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LW858_27635 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded LW858_27640 PF07497 Rho termination factor, RNA-binding domain LW858_27640 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LW858_27640 PF07498 Rho termination factor, N-terminal domain LW858_27645 PF01197 Ribosomal protein L31 LW858_27650 PF00265 Thymidine kinase LW858_27655 PF03462 PCRF domain LW858_27655 PF00472 RF-1 domain LW858_27660 PF13847 Methyltransferase domain LW858_27660 PF17827 PrmC N-terminal domain LW858_27665 PF09551 Stage II sporulation protein R (spore_II_R) LW858_27675 PF01300 Telomere recombination LW858_27675 PF03481 Putative GTP-binding controlling metal-binding LW858_27680 PF02659 Putative manganese efflux pump LW858_27690 PF01613 Flavin reductase like domain LW858_27695 PF07681 DoxX LW858_27700 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LW858_27705 PF01451 Low molecular weight phosphotyrosine protein phosphatase LW858_27710 PF02502 Ribose/Galactose Isomerase LW858_27715 PF04260 Protein of unknown function (DUF436) LW858_27720 PF00464 Serine hydroxymethyltransferase LW858_27740 PF03899 ATP synthase I chain LW858_27745 PF00119 ATP synthase A chain LW858_27750 PF00137 ATP synthase subunit C LW858_27755 PF00430 ATP synthase B/B' CF(0) LW858_27760 PF00213 ATP synthase delta (OSCP) subunit LW858_27765 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LW858_27765 PF00306 ATP synthase alpha/beta chain, C terminal domain LW858_27765 PF02874 ATP synthase alpha/beta family, beta-barrel domain LW858_27770 PF00231 ATP synthase LW858_27775 PF02874 ATP synthase alpha/beta family, beta-barrel domain LW858_27775 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LW858_27780 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LW858_27780 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LW858_27795 PF03707 Bacterial signalling protein N terminal repeat LW858_27795 PF00990 Diguanylate cyclase, GGDEF domain LW858_27795 PF00563 EAL domain LW858_27800 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LW858_27805 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LW858_27810 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LW858_27815 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LW858_27820 PF00146 NADH dehydrogenase LW858_27830 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LW858_27835 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LW858_27840 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus LW858_27840 PF00361 Proton-conducting membrane transporter LW858_27840 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LW858_27845 PF00361 Proton-conducting membrane transporter LW858_27850 PF00361 Proton-conducting membrane transporter LW858_27855 PF06612 Protein of unknown function (DUF1146) LW858_27865 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LW858_27870 PF08486 Stage II sporulation protein LW858_27875 PF04397 LytTr DNA-binding domain LW858_27875 PF00072 Response regulator receiver domain LW858_27880 PF00005 ABC transporter LW858_27890 PF01551 Peptidase family M23 LW858_27900 PF12116 Stage III sporulation protein D LW858_27910 PF07977 FabA-like domain LW858_27915 PF13614 AAA domain LW858_27920 PF13807 G-rich domain on putative tyrosine kinase LW858_27920 PF02706 Chain length determinant protein LW858_27925 PF13614 AAA domain LW858_27935 PF00483 Nucleotidyl transferase LW858_27940 PF02397 Bacterial sugar transferase LW858_27945 PF00535 Glycosyl transferase family 2 LW858_27950 PF01501 Glycosyl transferase family 8 LW858_27950 PF00535 Glycosyl transferase family 2 LW858_27980 PF01050 Mannose-6-phosphate isomerase LW858_27980 PF00483 Nucleotidyl transferase LW858_27985 PF01238 Phosphomannose isomerase type I LW858_27990 PF03816 Cell envelope-related transcriptional attenuator domain LW858_27995 PF04230 Polysaccharide pyruvyl transferase LW858_28010 PF04991 LicD family LW858_28035 PF00892 EamA-like transporter family LW858_28040 PF12804 MobA-like NTP transferase domain LW858_28045 PF16363 GDP-mannose 4,6 dehydratase LW858_28050 PF16363 GDP-mannose 4,6 dehydratase LW858_28055 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LW858_28055 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LW858_28055 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LW858_28055 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LW858_28060 PF05043 Mga helix-turn-helix domain LW858_28060 PF08279 HTH domain LW858_28060 PF00874 PRD domain LW858_28060 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LW858_28065 PF02378 Phosphotransferase system, EIIC LW858_28065 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LW858_28065 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LW858_28070 PF01238 Phosphomannose isomerase type I LW858_28075 PF00072 Response regulator receiver domain LW858_28075 PF00486 Transcriptional regulatory protein, C terminal LW858_28080 PF00512 His Kinase A (phospho-acceptor) domain LW858_28080 PF16736 Single Cache-like LW858_28080 PF00989 PAS fold LW858_28080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_28095 PF07690 Major Facilitator Superfamily LW858_28105 PF00005 ABC transporter LW858_28110 PF12704 MacB-like periplasmic core domain LW858_28110 PF02687 FtsX-like permease family LW858_28115 PF04893 Yip1 domain LW858_28125 PF00860 Permease family LW858_28130 PF00072 Response regulator receiver domain LW858_28130 PF00486 Transcriptional regulatory protein, C terminal LW858_28135 PF00989 PAS fold LW858_28135 PF16736 Single Cache-like LW858_28135 PF00512 His Kinase A (phospho-acceptor) domain LW858_28135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_28155 PF00892 EamA-like transporter family LW858_28185 PF00731 AIR carboxylase LW858_28190 PF02222 ATP-grasp domain LW858_28190 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LW858_28195 PF10397 Adenylosuccinate lyase C-terminus LW858_28195 PF00206 Lyase LW858_28200 PF01259 SAICAR synthetase LW858_28205 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase LW858_28215 PF00586 AIR synthase related protein, N-terminal domain LW858_28215 PF02769 AIR synthase related protein, C-terminal domain LW858_28215 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LW858_28220 PF00156 Phosphoribosyl transferase domain LW858_28225 PF02769 AIR synthase related protein, C-terminal domain LW858_28225 PF00586 AIR synthase related protein, N-terminal domain LW858_28230 PF00551 Formyl transferase LW858_28235 PF02142 MGS-like domain LW858_28235 PF01808 AICARFT/IMPCHase bienzyme LW858_28240 PF02844 Phosphoribosylglycinamide synthetase, N domain LW858_28240 PF02843 Phosphoribosylglycinamide synthetase, C domain LW858_28240 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LW858_28260 PF01884 PcrB family LW858_28265 PF13361 UvrD-like helicase C-terminal domain LW858_28265 PF00580 UvrD/REP helicase N-terminal domain LW858_28270 PF12826 Helix-hairpin-helix motif LW858_28270 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LW858_28270 PF03120 NAD-dependent DNA ligase OB-fold domain LW858_28270 PF01653 NAD-dependent DNA ligase adenylation domain LW858_28270 PF00533 BRCA1 C Terminus (BRCT) domain LW858_28275 PF07537 CamS sex pheromone cAM373 precursor LW858_28280 PF01925 Sulfite exporter TauE/SafE LW858_28285 PF00171 Aldehyde dehydrogenase family LW858_28290 PF00857 Isochorismatase family LW858_28295 PF00005 ABC transporter LW858_28295 PF09383 NIL domain LW858_28300 PF00528 Binding-protein-dependent transport system inner membrane component LW858_28305 PF03180 NLPA lipoprotein LW858_28310 PF05360 yiaA/B two helix domain LW858_28315 PF02686 Glu-tRNAGln amidotransferase C subunit LW858_28320 PF01425 Amidase LW858_28325 PF02637 GatB domain LW858_28325 PF02934 GatB/GatE catalytic domain LW858_28330 PF00781 Diacylglycerol kinase catalytic domain LW858_28335 PF13419 Haloacid dehalogenase-like hydrolase LW858_28340 PF00202 Aminotransferase class-III LW858_28345 PF00158 Sigma-54 interaction domain LW858_28350 PF00171 Aldehyde dehydrogenase family LW858_28355 PF00893 Small Multidrug Resistance protein LW858_28365 PF02073 Thermophilic metalloprotease (M29) LW858_28375 PF00589 Phage integrase family LW858_28385 PF01381 Helix-turn-helix LW858_28415 PF01695 IstB-like ATP binding protein LW858_28435 PF02498 BRO family, N-terminal domain LW858_28435 PF10548 P22AR C-terminal domain LW858_28460 PF00589 Phage integrase family LW858_28560 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LW858_28560 PF13457 GW (Gly-Tryp) dipeptide domain LW858_28580 PF17854 FtsK alpha domain LW858_28580 PF01580 FtsK/SpoIIIE family LW858_28580 PF09397 Ftsk gamma domain LW858_28600 PF07670 Nucleoside recognition LW858_28600 PF07662 Na+ dependent nucleoside transporter C-terminus LW858_28600 PF01773 Na+ dependent nucleoside transporter N-terminus LW858_28605 PF05958 tRNA (Uracil-5-)-methyltransferase LW858_28605 PF13847 Methyltransferase domain LW858_28605 PF01938 TRAM domain LW858_28660 PF01207 Dihydrouridine synthase (Dus) LW858_28670 PF07308 Protein of unknown function (DUF1456) LW858_28700 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LW858_28700 PF13378 Enolase C-terminal domain-like LW858_28710 PF03553 Na+/H+ antiporter family LW858_28715 PF07687 Peptidase dimerisation domain LW858_28715 PF01546 Peptidase family M20/M25/M40 LW858_28730 PF07992 Pyridine nucleotide-disulphide oxidoreductase LW858_28730 PF13192 Thioredoxin domain LW858_28735 PF00578 AhpC/TSA family LW858_28740 PF01636 Phosphotransferase enzyme family LW858_28745 PF01008 Initiation factor 2 subunit family LW858_28750 PF00596 Class II Aldolase and Adducin N-terminal domain LW858_28755 PF01032 FecCD transport family LW858_28760 PF01032 FecCD transport family LW858_28765 PF01497 Periplasmic binding protein LW858_28770 PF07992 Pyridine nucleotide-disulphide oxidoreductase LW858_28780 PF12728 Helix-turn-helix domain LW858_28815 PF13426 PAS domain LW858_28815 PF13188 PAS domain LW858_28815 PF00989 PAS fold LW858_28815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_28815 PF00512 His Kinase A (phospho-acceptor) domain LW858_28835 PF10127 RNA repair pathway DNA polymerase beta family LW858_28840 PF07690 Major Facilitator Superfamily LW858_28845 PF00355 Rieske [2Fe-2S] domain LW858_28845 PF01266 FAD dependent oxidoreductase LW858_28855 PF00528 Binding-protein-dependent transport system inner membrane component LW858_28860 PF00497 Bacterial extracellular solute-binding proteins, family 3 LW858_28865 PF00005 ABC transporter LW858_28870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LW858_28870 PF12729 Four helix bundle sensory module for signal transduction LW858_28870 PF00672 HAMP domain LW858_28875 PF01316 Arginine repressor, DNA binding domain LW858_28875 PF02863 Arginine repressor, C-terminal domain LW858_28885 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LW858_28885 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LW858_28890 PF13520 Amino acid permease LW858_28895 PF00696 Amino acid kinase family LW858_28900 PF00027 Cyclic nucleotide-binding domain LW858_28900 PF13545 Crp-like helix-turn-helix domain LW858_28910 PF08031 Berberine and berberine like LW858_28910 PF01565 FAD binding domain LW858_28915 PF00128 Alpha amylase, catalytic domain LW858_28915 PF16657 Maltogenic Amylase, C-terminal domain LW858_28935 PF03372 Endonuclease/Exonuclease/phosphatase family LW858_28940 PF01061 ABC-2 type transporter LW858_28945 PF01751 Toprim domain LW858_28945 PF01131 DNA topoisomerase LW858_28950 PF02110 Hydroxyethylthiazole kinase family LW858_28955 PF02581 Thiamine monophosphate synthase LW858_28960 PF03605 Anaerobic c4-dicarboxylate membrane transporter LW858_28965 PF00672 HAMP domain LW858_28965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LW858_28985 PF01381 Helix-turn-helix LW858_29000 PF10549 ORF11CD3 domain LW858_29000 PF09669 Phage regulatory protein Rha (Phage_pRha) LW858_29070 PF00589 Phage integrase family LW858_29165 PF05043 Mga helix-turn-helix domain LW858_29165 PF08280 M protein trans-acting positive regulator (MGA) HTH domain LW858_29165 PF00874 PRD domain LW858_29170 PF01051 Initiator Replication protein LW858_29200 PF03845 Spore germination protein LW858_29205 PF03323 Bacillus/Clostridium GerA spore germination protein LW858_29225 PF00583 Acetyltransferase (GNAT) family LW858_29230 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LW858_29235 PF03838 Recombination protein U LW858_29285 PF10502 Signal peptidase, peptidase S26 LW858_29300 PF00005 ABC transporter LW858_29315 PF13610 DDE domain LW858_29345 PF13610 DDE domain LW858_29355 PF01348 Type II intron maturase LW858_29355 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LW858_29360 PF02796 Helix-turn-helix domain of resolvase LW858_29360 PF00239 Resolvase, N terminal domain LW858_29405 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) LW858_29430 PF02371 Transposase IS116/IS110/IS902 family LW858_29430 PF01548 Transposase LW858_29440 PF13610 DDE domain LW858_29445 PF01609 Transposase DDE domain LW858_29455 PF13610 DDE domain LW858_29460 PF10502 Signal peptidase, peptidase S26 LW858_29475 PF13610 DDE domain LW858_29500 PF00535 Glycosyl transferase family 2 LW858_29505 PF00535 Glycosyl transferase family 2 LW858_29535 PF00535 Glycosyl transferase family 2 LW858_29550 PF00535 Glycosyl transferase family 2 LW858_29565 PF00535 Glycosyl transferase family 2 LW858_29575 PF01370 NAD dependent epimerase/dehydratase family LW858_29580 PF08484 C-methyltransferase C-terminal domain LW858_29580 PF08421 Putative zinc binding domain LW858_29585 PF16363 GDP-mannose 4,6 dehydratase LW858_29590 PF00483 Nucleotidyl transferase LW858_29680 PF13580 SIS domain LW858_29685 PF00367 phosphotransferase system, EIIB LW858_29685 PF02378 Phosphotransferase system, EIIC LW858_29760 PF01757 Acyltransferase family LW858_29905 PF00535 Glycosyl transferase family 2 LW858_29935 PF13610 DDE domain LW858_29970 PF07786 Protein of unknown function (DUF1624) LW858_29970 PF04235 Protein of unknown function (DUF418) LW858_29980 PF03323 Bacillus/Clostridium GerA spore germination protein LW858_29985 PF13610 DDE domain LW858_29995 PF17476 Clostridial binary toxin B/anthrax toxin PA domain 3 LW858_29995 PF17475 Clostridial binary toxin B/anthrax toxin PA domain 2 LW858_29995 PF03495 Clostridial binary toxin B/anthrax toxin PA Ca-binding domain LW858_29995 PF07691 PA14 domain LW858_30005 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain LW858_30005 PF03496 ADP-ribosyltransferase exoenzyme LW858_30070 PF01609 Transposase DDE domain LW858_30080 PF18277 AbrB C-terminal domain LW858_30080 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LW858_30085 PF17209 Hfq protein LW858_30090 PF00216 Bacterial DNA-binding protein LW858_30095 PF01022 Bacterial regulatory protein, arsR family LW858_30110 PF13401 AAA domain LW858_30115 PF09299 Mu transposase, C-terminal LW858_30115 PF00665 Integrase core domain LW858_30120 PF00239 Resolvase, N terminal domain LW858_30120 PF02796 Helix-turn-helix domain of resolvase LW858_30130 PF01609 Transposase DDE domain LW858_30135 PF01609 Transposase DDE domain LW858_30175 PF13610 DDE domain LW858_30180 PF00082 Subtilase family LW858_30180 PF05922 Peptidase inhibitor I9 LW858_30180 PF13860 FlgD Ig-like domain LW858_30180 PF02225 PA domain LW858_30185 PF13610 DDE domain LW858_30225 PF00072 Response regulator receiver domain LW858_30225 PF00486 Transcriptional regulatory protein, C terminal LW858_30230 PF00512 His Kinase A (phospho-acceptor) domain LW858_30230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LW858_30235 PF00005 ABC transporter LW858_30290 PF00581 Rhodanese-like domain LW858_30295 PF12389 Camelysin metallo-endopeptidase LW858_30300 PF01551 Peptidase family M23 LW858_30325 PF02661 Fic/DOC family LW858_30365 PF13610 DDE domain LW858_30380 PF10502 Signal peptidase, peptidase S26 LW858_30415 PF00072 Response regulator receiver domain LW858_30415 PF00486 Transcriptional regulatory protein, C terminal LW858_30435 PF01520 N-acetylmuramoyl-L-alanine amidase LW858_30435 PF00395 S-layer homology domain LW858_30440 PF01522 Polysaccharide deacetylase LW858_30465 PF13610 DDE domain LW858_30470 PF10425 C-terminus of bacterial fibrinogen-binding adhesin LW858_30470 PF17961 Bacterial Ig domain LW858_30470 PF00746 LPXTG cell wall anchor motif LW858_30470 PF04650 YSIRK type signal peptide LW858_30470 PF17210 SdrD B-like domain LW858_30495 PF13276 HTH-like domain LW858_30495 PF00665 Integrase core domain LW858_30495 PF13333 Integrase core domain LW858_30535 PF13333 Integrase core domain LW858_30535 PF00665 Integrase core domain LW858_30535 PF13276 HTH-like domain LW858_30550 PF13610 DDE domain LW858_30705 PF01022 Bacterial regulatory protein, arsR family LW858_30710 PF00216 Bacterial DNA-binding protein LW858_30725 PF09335 SNARE associated Golgi protein LW858_30730 PF00398 Ribosomal RNA adenine dimethylase LW858_30745 PF12389 Camelysin metallo-endopeptidase LW858_30750 PF00873 AcrB/AcrD/AcrF family LW858_30780 PF18277 AbrB C-terminal domain LW858_30780 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LW858_30800 PF00091 Tubulin/FtsZ family, GTPase domain LW858_30835 PF05504 Spore germination B3/ GerAC like, C-terminal LW858_30875 PF03741 Integral membrane protein TerC family LW858_30895 PF00194 Eukaryotic-type carbonic anhydrase LW858_30920 PF03944 delta endotoxin LW858_30920 PF03945 delta endotoxin, N-terminal domain LW858_30920 PF17997 Insecticidal delta-endotoxin CryIA(c) domain 5 LW858_30925 PF03945 delta endotoxin, N-terminal domain LW858_30925 PF03944 delta endotoxin LW858_30925 PF17997 Insecticidal delta-endotoxin CryIA(c) domain 5 LW858_30940 PF05791 Bacillus haemolytic enterotoxin (HBL) LW858_30945 PF05791 Bacillus haemolytic enterotoxin (HBL) LW858_30970 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal LW858_30970 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal LW858_30975 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain LW858_31035 PF13276 HTH-like domain LW858_31035 PF00665 Integrase core domain LW858_31035 PF13333 Integrase core domain LW858_31065 PF03824 High-affinity nickel-transport protein LW858_31075 PF03253 Urea transporter LW858_31080 PF00547 Urease, gamma subunit LW858_31085 PF00699 Urease beta subunit LW858_31090 PF01979 Amidohydrolase family LW858_31090 PF00449 Urease alpha-subunit, N-terminal domain LW858_31095 PF05194 UreE urease accessory protein, C-terminal domain LW858_31095 PF02814 UreE urease accessory protein, N-terminal domain LW858_31100 PF01730 UreF LW858_31105 PF02492 CobW/HypB/UreG, nucleotide-binding domain LW858_31110 PF01774 UreD urease accessory protein LW858_31140 PF00535 Glycosyl transferase family 2 LW858_31145 PF13610 DDE domain LW858_31170 PF05547 Immune inhibitor A peptidase M6 LW858_31180 PF13610 DDE domain LW858_31190 PF00005 ABC transporter LW858_31205 PF01757 Acyltransferase family LW858_31220 PF04235 Protein of unknown function (DUF418) LW858_31230 PF07537 CamS sex pheromone cAM373 precursor LW858_31275 PF00269 Small, acid-soluble spore proteins, alpha/beta type LW858_31285 PF13520 Amino acid permease LW858_31305 PF13333 Integrase core domain LW858_31305 PF13276 HTH-like domain LW858_31305 PF00665 Integrase core domain LW858_31315 PF13610 DDE domain LW858_31325 PF00388 Phosphatidylinositol-specific phospholipase C, X domain LW858_31330 PF13610 DDE domain LW858_31380 PF02600 Disulfide bond formation protein DsbB LW858_31385 PF00085 Thioredoxin LW858_31425 PF13610 DDE domain LW858_31455 PF01022 Bacterial regulatory protein, arsR family LW858_31465 PF17209 Hfq protein LW858_31470 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LW858_31470 PF18277 AbrB C-terminal domain LW858_31495 PF13610 DDE domain LW858_31575 PF01381 Helix-turn-helix LW858_31630 PF13610 DDE domain LW858_31635 PF01695 IstB-like ATP binding protein LW858_31665 PF13610 DDE domain LW858_31725 PF04235 Protein of unknown function (DUF418) LW858_31725 PF07786 Protein of unknown function (DUF1624) LW858_31745 PF02687 FtsX-like permease family LW858_31750 PF00005 ABC transporter LW858_31785 PF07691 PA14 domain LW858_31785 PF17476 Clostridial binary toxin B/anthrax toxin PA domain 3 LW858_31785 PF03495 Clostridial binary toxin B/anthrax toxin PA Ca-binding domain LW858_31785 PF17475 Clostridial binary toxin B/anthrax toxin PA domain 2 LW858_31795 PF13610 DDE domain LW858_31800 PF03323 Bacillus/Clostridium GerA spore germination protein LW858_31820 PF01757 Acyltransferase family LW858_31825 PF04151 Bacterial pre-peptidase C-terminal domain LW858_31825 PF08453 Peptidase family M9 N-terminal LW858_31825 PF01752 Collagenase LW858_31825 PF18496 Collagenase G catalytic helper subdomain LW858_31875 PF00239 Resolvase, N terminal domain LW858_31875 PF02796 Helix-turn-helix domain of resolvase LW858_31880 PF13610 DDE domain LW858_31885 PF13358 DDE superfamily endonuclease LW858_31935 PF13610 DDE domain LW858_31960 PF12791 Anti-sigma factor N-terminus LW858_31960 PF07691 PA14 domain LW858_32000 PF00392 Bacterial regulatory proteins, gntR family LW858_32005 PF04893 Yip1 domain LW858_32010 PF02687 FtsX-like permease family LW858_32010 PF12704 MacB-like periplasmic core domain LW858_32015 PF00005 ABC transporter LW858_32030 PF03703 Bacterial PH domain LW858_32065 PF13610 DDE domain LW858_32090 PF13610 DDE domain LW858_32095 PF02899 Phage integrase, N-terminal SAM-like domain LW858_32095 PF00589 Phage integrase family LW858_32105 PF00005 ABC transporter LW858_32125 PF13610 DDE domain LW858_32145 PF13610 DDE domain LW858_32225 PF02796 Helix-turn-helix domain of resolvase LW858_32225 PF00239 Resolvase, N terminal domain LW858_32230 PF01526 Tn3 transposase DDE domain LW858_32230 PF13700 Domain of unknown function (DUF4158) LW858_32260 PF13610 DDE domain LW858_32295 PF01022 Bacterial regulatory protein, arsR family LW858_32300 PF00216 Bacterial DNA-binding protein LW858_32305 PF17209 Hfq protein LW858_32310 PF18277 AbrB C-terminal domain LW858_32310 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LW858_32325 PF13610 DDE domain LW858_32330 PF03176 MMPL family LW858_32335 PF00440 Bacterial regulatory proteins, tetR family LW858_32335 PF18665 Tetracyclin repressor-like, C-terminal domain LW858_32345 PF13610 DDE domain LW858_32350 PF05504 Spore germination B3/ GerAC like, C-terminal LW858_32355 PF17209 Hfq protein LW858_32365 PF00239 Resolvase, N terminal domain LW858_32365 PF02796 Helix-turn-helix domain of resolvase LW858_32370 PF01609 Transposase DDE domain LW858_32395 PF01381 Helix-turn-helix LW858_32485 PF02534 Type IV secretory system Conjugative DNA transfer LW858_32520 PF00877 NlpC/P60 family LW858_32560 PF18840 Large polyvalent protein associated domain 25 LW858_32580 PF01751 Toprim domain LW858_32580 PF01131 DNA topoisomerase LW858_32580 PF13342 C-terminal repeat of topoisomerase LW858_32590 PF01131 DNA topoisomerase LW858_32590 PF01751 Toprim domain LW858_32590 PF01396 Topoisomerase DNA binding C4 zinc finger LW858_32605 PF00436 Single-strand binding protein family LW858_32610 PF18277 AbrB C-terminal domain LW858_32610 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LW858_32615 PF00216 Bacterial DNA-binding protein LW858_32625 PF01693 Caulimovirus viroplasmin LW858_32640 PF13700 Domain of unknown function (DUF4158) LW858_32640 PF01526 Tn3 transposase DDE domain LW858_32645 PF00239 Resolvase, N terminal domain LW858_32645 PF02796 Helix-turn-helix domain of resolvase LW858_32680 PF00005 ABC transporter LW858_32700 PF00005 ABC transporter LW858_32705 PF12704 MacB-like periplasmic core domain LW858_32705 PF02687 FtsX-like permease family LW858_32710 PF04893 Yip1 domain LW858_32720 PF02899 Phage integrase, N-terminal SAM-like domain LW858_32720 PF00589 Phage integrase family LW858_32730 PF00239 Resolvase, N terminal domain LW858_32730 PF02796 Helix-turn-helix domain of resolvase LW858_32755 PF05043 Mga helix-turn-helix domain LW858_32755 PF08280 M protein trans-acting positive regulator (MGA) HTH domain LW858_32760 PF13610 DDE domain LW858_32765 PF01022 Bacterial regulatory protein, arsR family LW858_32770 PF00216 Bacterial DNA-binding protein LW858_32775 PF13610 DDE domain LW858_32845 PF18801 response regulator aspartate phosphatase H, N terminal LW858_32860 PF04893 Yip1 domain LW858_32865 PF01527 Transposase LW858_32895 PF01740 STAS domain LW858_32895 PF00916 Sulfate permease family LW858_32900 PF00484 Carbonic anhydrase LW858_32915 PF01757 Acyltransferase family LW858_32930 PF02796 Helix-turn-helix domain of resolvase LW858_32930 PF00239 Resolvase, N terminal domain LW858_32960 PF00589 Phage integrase family LW858_32960 PF02899 Phage integrase, N-terminal SAM-like domain LW858_32970 PF00005 ABC transporter LW858_32985 PF01435 Peptidase family M48 LW858_33035 PF17209 Hfq protein LW858_33070 PF13152 Protein of unknown function (DUF3967) LW858_33070 PF13411 MerR HTH family regulatory protein LW858_33115 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LW858_33115 PF01348 Type II intron maturase LW858_33190 PF01348 Type II intron maturase LW858_33190 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LW858_33255 PF00245 Alkaline phosphatase LW858_33265 PF00589 Phage integrase family LW858_33265 PF02899 Phage integrase, N-terminal SAM-like domain LW858_33280 PF13610 DDE domain LW858_33300 PF13610 DDE domain LW858_33315 PF13610 DDE domain LW858_33435 PF00581 Rhodanese-like domain LW858_33445 PF00239 Resolvase, N terminal domain LW858_33445 PF02796 Helix-turn-helix domain of resolvase LW858_33455 PF13610 DDE domain LW858_33480 PF13610 DDE domain LW858_33485 PF00239 Resolvase, N terminal domain LW858_33485 PF02796 Helix-turn-helix domain of resolvase LW858_33490 PF13700 Domain of unknown function (DUF4158) LW858_33490 PF01526 Tn3 transposase DDE domain LW858_33505 PF13610 DDE domain LW858_33515 PF01554 MatE LW858_33525 PF01554 MatE LW858_33545 PF13610 DDE domain LW858_33590 PF01740 STAS domain LW858_33590 PF00916 Sulfate permease family LW858_33595 PF00484 Carbonic anhydrase LW858_33605 PF04231 Endonuclease I LW858_33610 PF13302 Acetyltransferase (GNAT) domain LW858_33615 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) LW858_33660 PF03944 delta endotoxin LW858_33660 PF03945 delta endotoxin, N-terminal domain LW858_33660 PF17997 Insecticidal delta-endotoxin CryIA(c) domain 5 LW858_33665 PF03944 delta endotoxin LW858_33665 PF17997 Insecticidal delta-endotoxin CryIA(c) domain 5 LW858_33665 PF03945 delta endotoxin, N-terminal domain LW858_33715 PF00082 Subtilase family LW858_33715 PF05922 Peptidase inhibitor I9 LW858_33730 PF01446 Replication protein